Query psy13604
Match_columns 167
No_of_seqs 216 out of 934
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 23:28:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13604.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13604hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hm8_A Hexokinase-3; glucose, 99.9 6.6E-27 2.2E-31 209.0 9.0 100 67-166 329-445 (445)
2 3f9m_A Glucokinase; hexokinase 99.9 4.9E-26 1.7E-30 204.5 9.1 108 57-166 345-469 (470)
3 3o8m_A Hexokinase; rnaseh-like 99.9 7.9E-24 2.7E-28 190.8 11.9 86 79-164 384-476 (485)
4 2yhx_A Hexokinase B; transfera 99.8 2.5E-20 8.4E-25 166.7 10.6 87 79-166 358-451 (457)
5 3hm8_A Hexokinase-3; glucose, 99.8 1.1E-20 3.8E-25 168.8 4.6 77 1-77 361-443 (445)
6 3f9m_A Glucokinase; hexokinase 99.8 8.5E-20 2.9E-24 164.0 3.2 76 2-77 386-467 (470)
7 1cza_N Hexokinase type I; stru 99.8 7.3E-19 2.5E-23 168.0 8.3 87 79-165 823-915 (917)
8 3o8m_A Hexokinase; rnaseh-like 99.7 3.1E-18 1.1E-22 154.3 7.1 73 2-74 394-473 (485)
9 1bdg_A Hexokinase; phosphotran 99.7 3.3E-17 1.1E-21 146.1 7.4 83 79-161 367-450 (451)
10 1cza_N Hexokinase type I; stru 99.6 1.6E-15 5.6E-20 144.9 7.6 87 79-165 375-467 (917)
11 2yhx_A Hexokinase B; transfera 99.6 2.6E-15 9E-20 134.2 7.8 76 2-78 368-450 (457)
12 1bdg_A Hexokinase; phosphotran 99.4 2.8E-13 9.6E-18 120.8 4.1 73 2-74 377-450 (451)
13 2ch5_A NAGK protein; transfera 96.0 0.032 1.1E-06 46.1 9.1 82 75-156 230-323 (347)
14 2qm1_A Glucokinase; alpha-beta 95.2 0.055 1.9E-06 44.2 7.3 75 79-155 239-319 (326)
15 2hoe_A N-acetylglucosamine kin 94.0 0.25 8.4E-06 41.8 8.8 75 79-155 291-369 (380)
16 3r8e_A Hypothetical sugar kina 93.9 0.25 8.5E-06 40.8 8.5 76 78-155 236-317 (321)
17 2e2o_A Hexokinase; acetate and 93.9 0.18 6.3E-06 40.8 7.6 75 75-156 212-286 (299)
18 2aa4_A Mannac kinase, putative 91.6 0.5 1.7E-05 37.9 7.1 74 79-155 210-286 (289)
19 4htl_A Beta-glucoside kinase; 90.2 1.9 6.4E-05 35.1 9.3 73 79-155 214-289 (297)
20 1z05_A Transcriptional regulat 90.2 1.4 4.7E-05 37.8 8.9 74 79-155 334-413 (429)
21 3vgl_A Glucokinase; ROK family 90.0 2.7 9.1E-05 34.4 10.2 73 79-153 229-308 (321)
22 1z6r_A MLC protein; transcript 89.7 1.5 5E-05 37.1 8.6 75 79-155 311-391 (406)
23 3vov_A Glucokinase, hexokinase 89.4 1.3 4.6E-05 36.1 7.9 75 79-155 214-293 (302)
24 4db3_A Glcnac kinase, N-acetyl 89.0 1.3 4.5E-05 36.5 7.6 73 79-154 246-323 (327)
25 2gup_A ROK family protein; sug 88.7 2.4 8.1E-05 33.9 8.8 75 78-155 203-285 (292)
26 2yhw_A Bifunctional UDP-N-acet 88.3 2.1 7.3E-05 35.2 8.5 73 78-155 260-336 (343)
27 2ap1_A Putative regulator prot 87.6 0.69 2.4E-05 37.9 5.0 73 79-154 246-323 (327)
28 3htv_A D-allose kinase, alloki 84.5 5.1 0.00017 32.8 8.8 65 89-155 226-297 (310)
29 2ch5_A NAGK protein; transfera 83.2 2.9 0.0001 34.1 6.8 65 4-68 246-322 (347)
30 1saz_A Probable butyrate kinas 81.9 7.7 0.00026 32.8 9.1 77 75-154 266-345 (381)
31 1sz2_A Glucokinase, glucose ki 77.2 8.4 0.00029 31.5 7.7 79 76-155 238-324 (332)
32 2q2r_A Glucokinase 1, putative 75.8 9.8 0.00033 31.7 7.8 79 75-155 277-369 (373)
33 3ifr_A Carbohydrate kinase, FG 75.6 14 0.00049 32.3 9.1 52 102-159 398-449 (508)
34 3h6e_A Carbohydrate kinase, FG 74.7 4.3 0.00015 35.7 5.5 69 83-158 364-436 (482)
35 2qm1_A Glucokinase; alpha-beta 74.6 3.5 0.00012 33.2 4.6 61 4-66 251-317 (326)
36 3l0q_A Xylulose kinase; xlylul 73.5 12 0.0004 33.2 8.0 48 106-159 444-491 (554)
37 3ezw_A Glycerol kinase; glycer 72.4 13 0.00043 32.8 8.0 52 102-159 400-451 (526)
38 3i8b_A Xylulose kinase; strain 72.3 16 0.00053 32.3 8.5 49 106-160 426-474 (515)
39 3jvp_A Ribulokinase; PSI-II, N 71.9 8.4 0.00029 34.3 6.8 50 106-160 441-490 (572)
40 3epq_A Putative fructokinase; 70.0 14 0.00048 30.1 7.3 74 79-155 201-287 (302)
41 2p3r_A Glycerol kinase; glycer 69.0 15 0.0005 32.3 7.6 53 102-160 399-451 (510)
42 2e2o_A Hexokinase; acetate and 68.7 6.3 0.00021 31.5 4.8 56 4-68 228-285 (299)
43 3ll3_A Gluconate kinase; xylul 67.8 19 0.00065 31.5 8.1 48 106-159 395-442 (504)
44 2d4w_A Glycerol kinase; alpha 67.7 17 0.00059 31.7 7.7 48 106-159 405-452 (504)
45 2hoe_A N-acetylglucosamine kin 67.5 9.4 0.00032 31.9 5.8 62 4-67 303-368 (380)
46 3r8e_A Hypothetical sugar kina 66.3 8.3 0.00028 31.4 5.1 62 4-67 249-316 (321)
47 4bc3_A Xylulose kinase; transf 64.6 13 0.00043 32.9 6.3 48 107-160 437-484 (538)
48 3g25_A Glycerol kinase; IDP007 64.3 24 0.00081 30.7 8.0 48 106-159 406-453 (501)
49 2dpn_A Glycerol kinase; thermu 63.7 18 0.00061 31.4 7.0 47 107-159 401-447 (495)
50 2itm_A Xylulose kinase, xylulo 63.2 21 0.0007 30.9 7.3 47 107-159 389-436 (484)
51 2zf5_O Glycerol kinase; hypert 63.2 18 0.00063 31.4 7.0 60 94-159 381-442 (497)
52 2w40_A Glycerol kinase, putati 61.9 19 0.00065 31.3 6.9 47 107-159 410-456 (503)
53 4e1j_A Glycerol kinase; struct 61.8 10 0.00035 33.4 5.2 47 107-159 428-474 (520)
54 1zbs_A Hypothetical protein PG 61.3 9.4 0.00032 30.6 4.5 78 75-162 208-285 (291)
55 3mcp_A Glucokinase; structural 60.3 15 0.00053 31.1 5.8 54 77-133 234-287 (366)
56 3h3n_X Glycerol kinase; ATP-bi 59.5 28 0.00094 30.4 7.5 48 106-159 405-452 (506)
57 1zxo_A Conserved hypothetical 59.5 4.3 0.00015 32.7 2.1 73 73-155 204-276 (291)
58 3vgl_A Glucokinase; ROK family 56.5 22 0.00074 28.9 6.0 54 4-59 241-298 (321)
59 3hz6_A Xylulokinase; xylulose, 53.9 10 0.00034 33.3 3.7 48 106-159 404-452 (511)
60 1woq_A Inorganic polyphosphate 51.4 17 0.00057 28.6 4.4 65 83-156 195-260 (267)
61 2aa4_A Mannac kinase, putative 50.9 20 0.00067 28.3 4.7 61 4-67 222-285 (289)
62 3ejx_A DAP epimerase, diaminop 50.9 0.84 2.9E-05 38.8 -3.6 71 25-114 213-283 (317)
63 1zc6_A Probable N-acetylglucos 50.4 9 0.00031 30.8 2.6 67 75-155 224-291 (305)
64 1z05_A Transcriptional regulat 49.5 35 0.0012 28.9 6.3 62 4-68 346-413 (429)
65 1z6r_A MLC protein; transcript 46.4 52 0.0018 27.4 6.9 62 4-67 323-390 (406)
66 2gup_A ROK family protein; sug 43.9 35 0.0012 26.9 5.2 61 4-67 216-284 (292)
67 4htl_A Beta-glucoside kinase; 41.0 53 0.0018 26.2 5.9 59 4-66 226-287 (297)
68 3htv_A D-allose kinase, alloki 37.4 1.4E+02 0.0046 24.0 7.9 61 4-66 228-295 (310)
69 3vov_A Glucokinase, hexokinase 37.3 65 0.0022 25.8 5.9 62 4-67 226-292 (302)
70 1hux_A Activator of (R)-2-hydr 35.9 71 0.0024 25.3 5.9 46 107-158 211-257 (270)
71 3ifr_A Carbohydrate kinase, FG 35.3 79 0.0027 27.5 6.5 51 15-71 398-448 (508)
72 3qgm_A P-nitrophenyl phosphata 34.6 36 0.0012 25.9 3.8 57 19-77 11-67 (268)
73 2uyt_A Rhamnulokinase; rhamnos 33.8 1.2E+02 0.0043 25.8 7.4 46 106-158 395-440 (489)
74 3qb0_A Actin-related protein 4 33.8 29 0.00099 30.9 3.4 50 107-158 417-472 (498)
75 3g7n_A Lipase; hydrolase fold, 33.4 33 0.0011 27.5 3.5 34 125-162 110-146 (258)
76 1saz_A Probable butyrate kinas 33.2 67 0.0023 26.9 5.5 53 4-59 282-334 (381)
77 3o0d_A YALI0A20350P, triacylgl 33.1 36 0.0012 28.0 3.7 35 125-163 140-177 (301)
78 4db3_A Glcnac kinase, N-acetyl 32.1 44 0.0015 27.2 4.1 53 4-59 258-312 (327)
79 1tia_A Lipase; hydrolase(carbo 31.4 41 0.0014 27.0 3.7 37 122-162 120-159 (279)
80 3h6e_A Carbohydrate kinase, FG 31.1 74 0.0025 27.7 5.6 60 5-71 376-436 (482)
81 3uue_A LIP1, secretory lipase 30.5 37 0.0013 27.5 3.3 35 124-162 123-160 (279)
82 3zxo_A Redox sensor histidine 30.2 1.2E+02 0.0041 20.0 6.7 67 8-74 12-104 (129)
83 3epr_A Hydrolase, haloacid deh 29.9 28 0.00095 26.7 2.4 57 20-78 9-65 (264)
84 2fxu_A Alpha-actin-1, actin, a 29.9 45 0.0016 27.5 3.8 49 107-157 297-349 (375)
85 3l0q_A Xylulose kinase; xlylul 29.3 65 0.0022 28.3 5.0 47 19-71 444-490 (554)
86 1uwc_A Feruloyl esterase A; hy 28.9 47 0.0016 26.4 3.7 37 122-162 108-147 (261)
87 3i8b_A Xylulose kinase; strain 28.1 91 0.0031 27.3 5.6 52 15-72 422-473 (515)
88 3ezw_A Glycerol kinase; glycer 27.9 1E+02 0.0035 26.9 5.9 51 15-71 400-450 (526)
89 3jvp_A Ribulokinase; PSI-II, N 27.4 44 0.0015 29.6 3.5 48 19-71 441-488 (572)
90 3s5p_A Ribose 5-phosphate isom 27.1 1.3E+02 0.0043 23.1 5.6 54 98-155 43-96 (166)
91 3ngm_A Extracellular lipase; s 26.4 48 0.0016 27.6 3.3 37 122-162 119-158 (319)
92 2ap1_A Putative regulator prot 25.6 24 0.00081 28.5 1.3 60 4-66 258-322 (327)
93 3mpo_A Predicted hydrolase of 25.3 43 0.0015 25.6 2.7 54 19-76 8-61 (279)
94 2p3r_A Glycerol kinase; glycer 25.0 1.2E+02 0.0042 26.3 5.9 51 15-71 399-449 (510)
95 2po1_A Probable exosome comple 25.0 1.2E+02 0.0041 23.8 5.4 28 132-159 117-147 (249)
96 2amy_A PMM 2, phosphomannomuta 24.2 41 0.0014 25.6 2.3 36 20-57 10-45 (246)
97 2jwk_A Protein TOLR; periplasm 24.1 1.3E+02 0.0045 18.4 4.5 50 105-155 4-64 (74)
98 3he8_A Ribose-5-phosphate isom 23.9 1E+02 0.0034 23.2 4.4 35 117-155 41-75 (149)
99 1o1x_A Ribose-5-phosphate isom 23.0 1.1E+02 0.0037 23.2 4.5 35 117-155 53-87 (155)
100 3pdw_A Uncharacterized hydrola 23.0 64 0.0022 24.5 3.3 58 19-78 9-66 (266)
101 3ejx_A DAP epimerase, diaminop 22.9 4.1 0.00014 34.5 -3.9 22 55-76 89-116 (317)
102 1vjr_A 4-nitrophenylphosphatas 22.9 51 0.0017 25.0 2.7 57 19-77 20-76 (271)
103 2d4w_A Glycerol kinase; alpha 22.4 1.5E+02 0.0051 25.6 5.9 51 15-71 401-451 (504)
104 2pib_A Phosphorylated carbohyd 22.4 44 0.0015 23.5 2.1 26 107-132 5-30 (216)
105 2yhw_A Bifunctional UDP-N-acet 22.4 1.3E+02 0.0044 24.2 5.2 50 4-58 273-324 (343)
106 1uhm_A Histone H1, histone HHO 22.3 48 0.0016 21.8 2.1 17 30-46 3-19 (78)
107 2vvr_A Ribose-5-phosphate isom 22.2 1.1E+02 0.0037 23.0 4.3 35 117-155 42-76 (149)
108 3s5p_A Ribose 5-phosphate isom 22.2 98 0.0033 23.8 4.1 54 11-68 43-96 (166)
109 1rre_A ATP-dependent protease 22.2 97 0.0033 23.9 4.2 30 133-162 75-109 (200)
110 3dnp_A Stress response protein 21.9 62 0.0021 24.8 3.0 55 19-77 9-63 (290)
111 3ll3_A Gluconate kinase; xylul 21.7 1.1E+02 0.0037 26.6 4.8 47 19-71 395-441 (504)
112 3ph3_A Ribose-5-phosphate isom 21.6 1.2E+02 0.004 23.4 4.4 35 117-155 61-95 (169)
113 3pgv_A Haloacid dehalogenase-l 21.1 96 0.0033 23.9 4.0 55 19-77 24-78 (285)
114 3sgw_A Ribose 5-phosphate isom 21.0 72 0.0025 25.0 3.2 35 117-155 73-107 (184)
115 2vvp_A Ribose-5-phosphate isom 21.0 1.1E+02 0.0038 23.3 4.2 35 117-155 45-79 (162)
116 1tgl_A Triacyl-glycerol acylhy 20.9 71 0.0024 25.2 3.3 35 123-161 120-157 (269)
117 1tib_A Lipase; hydrolase(carbo 20.6 84 0.0029 24.9 3.6 37 122-162 121-160 (269)
118 1lgy_A Lipase, triacylglycerol 20.2 71 0.0024 25.4 3.1 36 122-161 120-158 (269)
119 2itm_A Xylulose kinase, xylulo 20.1 1.9E+02 0.0067 24.6 6.1 59 7-71 373-435 (484)
120 2pq0_A Hypothetical conserved 20.1 45 0.0015 25.3 1.8 52 21-76 8-59 (258)
No 1
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=99.93 E-value=6.6e-27 Score=208.96 Aligned_cols=100 Identities=33% Similarity=0.501 Sum_probs=89.3
Q ss_pred HHHHHHHhcccc-----------chHHHHHHHHHHHHHHHHHHHHhCC------CceEEEEcCcccccCcchHHHHHHHH
Q psy13604 67 ASAIALKLGAFH-----------NFIMSHNFIMFSISGTAVLVRRIDR------DDITIAVDGSLYKYHPRLKHWLQKYI 129 (167)
Q Consensus 67 ~aav~~~lg~~~-----------~~~V~~RsA~L~Aa~iaail~~~~~------~~~~IavDGSv~e~~P~f~~~l~~~l 129 (167)
...+.+.++.+. |++|++|||||+|++++||++|+++ .+++|||||||||+||+|+++|++++
T Consensus 329 ~~~~l~~l~~~~t~~d~~~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~f~~~l~~~l 408 (445)
T 3hm8_A 329 VRAILEDLGLPLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRFSSLVAATV 408 (445)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCcEEEEeceehccChhHHHHHHHHH
Confidence 455667787743 9999999999999999999999964 26899999999999999999999999
Q ss_pred HhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhhccC
Q psy13604 130 QLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGAFQS 166 (167)
Q Consensus 130 ~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~~~~~~~~ 166 (167)
++|.|+++|+|.+++||||+|||++||++.++..|++
T Consensus 409 ~~l~~~~~v~~~~s~DGSg~GAAl~AA~a~~~~~~~~ 445 (445)
T 3hm8_A 409 RELAPRCVVTFLQSEDGSGKGAALVTAVACRLAQLTR 445 (445)
T ss_dssp HHHCTTEEEEEEECSSCHHHHHHHHHHHHHHHHC---
T ss_pred HHhCCCCcEEEEECCCCchHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999875
No 2
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=99.93 E-value=4.9e-26 Score=204.52 Aligned_cols=108 Identities=30% Similarity=0.434 Sum_probs=90.4
Q ss_pred ccCCcchhhHHHHHHHHhcccc-----------chHHHHHHHHHHHHHHHHHHHHhCCCc------eEEEEcCcccccCc
Q psy13604 57 EDGSGKGAGLASAIALKLGAFH-----------NFIMSHNFIMFSISGTAVLVRRIDRDD------ITIAVDGSLYKYHP 119 (167)
Q Consensus 57 ~DGSg~GaA~~aav~~~lg~~~-----------~~~V~~RsA~L~Aa~iaail~~~~~~~------~~IavDGSv~e~~P 119 (167)
.|-++. .....+.+.++..+ |++|++|||+|+|++++||++|+++++ ++||||||||+|||
T Consensus 345 ~d~~~~--~~~~~il~~l~~~~~~~d~~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp 422 (470)
T 3f9m_A 345 SDTGDR--KQIYNILSTLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHP 422 (470)
T ss_dssp TCCSSC--HHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCT
T ss_pred cCCCch--HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeccHHHhCc
Confidence 344444 44455667787743 999999999999999999999997543 99999999999999
Q ss_pred chHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhhccC
Q psy13604 120 RLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGAFQS 166 (167)
Q Consensus 120 ~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~~~~~~~~ 166 (167)
+|+++|++++++|+|+++|+|.+++||||+|||++||++.+++.|.+
T Consensus 423 ~f~~~~~~~l~~l~~~~~v~l~~a~DGSg~GAAliAa~a~~~~~~~~ 469 (470)
T 3f9m_A 423 SFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACKKACMLG 469 (470)
T ss_dssp THHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHHHHTC------
T ss_pred hHHHHHHHHHHHHcCCCeEEEEEcCCCcHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999988754
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=99.90 E-value=7.9e-24 Score=190.80 Aligned_cols=86 Identities=22% Similarity=0.335 Sum_probs=82.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCC-------CCcEEEEEcCCcchHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP-------NKTFRLLLAEDGSGKGA 151 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~-------~~~v~~~~a~dGSg~GA 151 (167)
|++|++|||+|+|+++++|+++++.++++||||||||+|||+|+++|++++++++| +++|+|.+++||||+||
T Consensus 384 ~~~V~~RAA~L~Aa~iaail~~~~~~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GA 463 (485)
T 3o8m_A 384 AELVGTRAARLTVCGVSAICDKRGYKTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGA 463 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999986 57899999999999999
Q ss_pred HHHHHHHHHHhhc
Q psy13604 152 GLASAIALKLGAF 164 (167)
Q Consensus 152 Al~aA~a~~~~~~ 164 (167)
|++||++.+..+|
T Consensus 464 AliAa~a~~~~~~ 476 (485)
T 3o8m_A 464 AIIACLTQKRLAA 476 (485)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887654
No 4
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=99.82 E-value=2.5e-20 Score=166.75 Aligned_cols=87 Identities=14% Similarity=0.156 Sum_probs=82.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCC-------CCcEEEEEcCCcchHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP-------NKTFRLLLAEDGSGKGA 151 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~-------~~~v~~~~a~dGSg~GA 151 (167)
|+.|++|||+|+|+++++|++++++++++|+||||| ++||.|+++|++++++|++ +++|+|.+++||||+||
T Consensus 358 a~~V~~RaA~l~A~~iaai~~~~~~~~~~V~vdGsv-~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GA 436 (457)
T 2yhx_A 358 LFLIAAYAFRLVVCXIXAICQKKGYSSGHIAAXGSX-RSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAAS 436 (457)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTCSSEEEEEESTT-TTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEECCc-ccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhH
Confidence 999999999999999999999999989999999999 9999999999999999983 46899999999999999
Q ss_pred HHHHHHHHHHhhccC
Q psy13604 152 GLASAIALKLGAFQS 166 (167)
Q Consensus 152 Al~aA~a~~~~~~~~ 166 (167)
||+||++.+...|+.
T Consensus 437 Al~aa~~~~~~~~~~ 451 (457)
T 2yhx_A 437 XVIXSIASAXXSXAX 451 (457)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhhhhhhh
Confidence 999999999988764
No 5
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=99.80 E-value=1.1e-20 Score=168.77 Aligned_cols=77 Identities=36% Similarity=0.633 Sum_probs=71.0
Q ss_pred CeehhHHHHHHhHhCC------CCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHh
Q psy13604 1 MFSFSGTAVLVRRIDR------DDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKL 74 (167)
Q Consensus 1 ~L~aa~iaail~~~~~------~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~l 74 (167)
.|+||+|+||++|++. .+++|||||||||+||+|+++|+++|++|.|+++|+|.+++||||+|||+++|++.++
T Consensus 361 ~L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~f~~~l~~~l~~l~~~~~v~~~~s~DGSg~GAAl~AA~a~~~ 440 (445)
T 3hm8_A 361 QLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRFSSLVAATVRELAPRCVVTFLQSEDGSGKGAALVTAVACRL 440 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccccccCcEEEEeceehccChhHHHHHHHHHHHhCCCCcEEEEECCCCchHHHHHHHHHHHHH
Confidence 3799999999999953 2689999999999999999999999999999999999999999999999999999988
Q ss_pred ccc
Q psy13604 75 GAF 77 (167)
Q Consensus 75 g~~ 77 (167)
..+
T Consensus 441 ~~~ 443 (445)
T 3hm8_A 441 AQL 443 (445)
T ss_dssp HC-
T ss_pred Hhh
Confidence 754
No 6
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=99.77 E-value=8.5e-20 Score=164.03 Aligned_cols=76 Identities=36% Similarity=0.621 Sum_probs=68.5
Q ss_pred eehhHHHHHHhHhCCC------CeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhc
Q psy13604 2 FSFSGTAVLVRRIDRD------DITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLG 75 (167)
Q Consensus 2 L~aa~iaail~~~~~~------~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg 75 (167)
|+||+|+||++|++.+ +++||||||||+|||+|+++++++|++|+|+++|+|.+++||||+|||++++++.++.
T Consensus 386 L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~~~~v~l~~a~DGSg~GAAliAa~a~~~~ 465 (470)
T 3f9m_A 386 MCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACKKA 465 (470)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhcccccccccceEEEEeccHHHhCchHHHHHHHHHHHHcCCCeEEEEEcCCCcHHHHHHHHHHHHHHH
Confidence 7999999999999753 3999999999999999999999999999999999999999999999999999998876
Q ss_pred cc
Q psy13604 76 AF 77 (167)
Q Consensus 76 ~~ 77 (167)
.+
T Consensus 466 ~~ 467 (470)
T 3f9m_A 466 CM 467 (470)
T ss_dssp --
T ss_pred Hh
Confidence 43
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.76 E-value=7.3e-19 Score=168.00 Aligned_cols=87 Identities=33% Similarity=0.560 Sum_probs=80.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCC------CceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDR------DDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAG 152 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~------~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAA 152 (167)
|+.|++|||+|+|++|++|++++++ .+.+|+||||||++||.|+++|+++++++.|+++|+|.+++||||+|||
T Consensus 823 a~~v~~RaA~l~a~~iaai~~~~~~~~~~~~~~~~V~vdGsv~~~~p~f~~~~~~~l~~l~~~~~v~~~~~~dgsg~GAA 902 (917)
T 1cza_N 823 CGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAA 902 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHSTTEEEEEEECSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccCccceEEEECCHHHHcCcHHHHHHHHHHHHhCCCCceEEEEecCChHHHHH
Confidence 8999999999999999999999975 2389999999999999999999999999999899999999999999999
Q ss_pred HHHHHHHHHhhcc
Q psy13604 153 LASAIALKLGAFQ 165 (167)
Q Consensus 153 l~aA~a~~~~~~~ 165 (167)
++||++.++..+.
T Consensus 903 l~aa~~~~~~~~~ 915 (917)
T 1cza_N 903 LITAVGVRLRTEA 915 (917)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHhhc
Confidence 9999999887653
No 8
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=99.73 E-value=3.1e-18 Score=154.34 Aligned_cols=73 Identities=25% Similarity=0.420 Sum_probs=69.3
Q ss_pred eehhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCC-------CCeEEEEEeccCCcchhhHHHHHHHHh
Q psy13604 2 FSFSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP-------NKTFRLLLAEDGSGKGAGLASAIALKL 74 (167)
Q Consensus 2 L~aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~-------~~~v~~~~a~DGSg~GaA~~aav~~~l 74 (167)
|+|++|++|+++++.+.++||+|||||+|||+|+++++++++++++ +++|+|.+++||||+|||++++++.+.
T Consensus 394 L~Aa~iaail~~~~~~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~~ 473 (485)
T 3o8m_A 394 LTVCGVSAICDKRGYKTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQKR 473 (485)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999985 578999999999999999999998765
No 9
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=99.68 E-value=3.3e-17 Score=146.12 Aligned_cols=83 Identities=36% Similarity=0.604 Sum_probs=77.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhC-CCCcEEEEEcCCcchHHHHHHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-PNKTFRLLLAEDGSGKGAGLASAI 157 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~-~~~~v~~~~a~dGSg~GAAl~aA~ 157 (167)
|..|.+|+|+|+|+++++|+++++.++++|++|||||++||.|++++++++++++ |+.+|++.+++|||++|||++|++
T Consensus 367 a~~V~~RaA~lla~~ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~~dgs~iGAAllA~~ 446 (451)
T 1bdg_A 367 CEMVVKRAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLSEDGSGKGAAAIAAS 446 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEECTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEECCCccHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999997 678999999999999999999998
Q ss_pred HHHH
Q psy13604 158 ALKL 161 (167)
Q Consensus 158 a~~~ 161 (167)
+.++
T Consensus 447 ~~~~ 450 (451)
T 1bdg_A 447 CTRQ 450 (451)
T ss_dssp C---
T ss_pred Hhhc
Confidence 7664
No 10
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.58 E-value=1.6e-15 Score=144.92 Aligned_cols=87 Identities=34% Similarity=0.577 Sum_probs=81.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh--CC----CceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRI--DR----DDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAG 152 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~--~~----~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAA 152 (167)
|..|.+|+|+++|++|++|+.++ ++ ++.+|++|||||++||.|++.+++++++++|+.+++|++++|||++|||
T Consensus 375 a~~v~~raa~llA~gia~ii~~l~~dp~~~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~~~~~i~~a~dgs~~GAA 454 (917)
T 1cza_N 375 CTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAA 454 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTTEEEEEEECTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCcccCcceEEEECCchhhccHHHHHHHHHHHHHhcCCCceEEEEeccchHHHHH
Confidence 99999999999999999999999 43 2389999999999999999999999999998889999999999999999
Q ss_pred HHHHHHHHHhhcc
Q psy13604 153 LASAIALKLGAFQ 165 (167)
Q Consensus 153 l~aA~a~~~~~~~ 165 (167)
++||++.++..|+
T Consensus 455 ~laa~~~~l~kq~ 467 (917)
T 1cza_N 455 MVTAVAYRLAEQH 467 (917)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHhHhhhhhcc
Confidence 9999999988775
No 11
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=99.57 E-value=2.6e-15 Score=134.23 Aligned_cols=76 Identities=14% Similarity=0.137 Sum_probs=70.3
Q ss_pred eehhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCC-------CCeEEEEEeccCCcchhhHHHHHHHHh
Q psy13604 2 FSFSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP-------NKTFRLLLAEDGSGKGAGLASAIALKL 74 (167)
Q Consensus 2 L~aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~-------~~~v~~~~a~DGSg~GaA~~aav~~~l 74 (167)
|+|++|++|+++++.++++|+||||| ++||.|++++++++++|++ +++|+|.+++||||+|||++++++.++
T Consensus 368 l~A~~iaai~~~~~~~~~~V~vdGsv-~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~~~ 446 (457)
T 2yhx_A 368 LVVCXIXAICQKKGYSSGHIAAXGSX-RSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASAX 446 (457)
T ss_dssp HHTHHHHHHHHHHTCSSEEEEEESTT-TTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEEEECCc-ccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHhhh
Confidence 78999999999999889999999999 9999999999999999873 568999999999999999999999887
Q ss_pred cccc
Q psy13604 75 GAFH 78 (167)
Q Consensus 75 g~~~ 78 (167)
..+.
T Consensus 447 ~~~~ 450 (457)
T 2yhx_A 447 XSXA 450 (457)
T ss_dssp HHTT
T ss_pred hhhh
Confidence 6654
No 12
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=99.36 E-value=2.8e-13 Score=120.75 Aligned_cols=73 Identities=41% Similarity=0.706 Sum_probs=66.2
Q ss_pred eehhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhC-CCCeEEEEEeccCCcchhhHHHHHHHHh
Q psy13604 2 FSFSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-PNKTFRLLLAEDGSGKGAGLASAIALKL 74 (167)
Q Consensus 2 L~aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~-~~~~v~~~~a~DGSg~GaA~~aav~~~l 74 (167)
|+|++|++|+++++.++++|++|||||++||.|++++++++++++ |+.+|++.+++|||++|||++++++.++
T Consensus 377 lla~~ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~~dgs~iGAAllA~~~~~~ 450 (451)
T 1bdg_A 377 LAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLSEDGSGKGAAAIAASCTRQ 450 (451)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEECTTHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEECCCccHHHHHHHHHHHhhc
Confidence 679999999999998899999999999999999999999999886 5789999999999999999999887665
No 13
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.03 E-value=0.032 Score=46.12 Aligned_cols=82 Identities=17% Similarity=0.077 Sum_probs=65.4
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhCCC------ceEEEEcCcccccCcchHHHHHHHHHhhC--C----CCcEEEEE
Q psy13604 75 GAFHNFIMSHNFIMFSISGTAVLVRRIDRD------DITIAVDGSLYKYHPRLKHWLQKYIQLLV--P----NKTFRLLL 142 (167)
Q Consensus 75 g~~~~~~V~~RsA~L~Aa~iaail~~~~~~------~~~IavDGSv~e~~P~f~~~l~~~l~~l~--~----~~~v~~~~ 142 (167)
|...+..+..++++..+.+++.++..++.+ ...|-+.|++.+..|.|.+.+++.+++.. | ..+|.+..
T Consensus 230 gD~~a~~il~~~~~~La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~ 309 (347)
T 2ch5_A 230 GDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMK 309 (347)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEe
Confidence 444588999999999999999999988864 24788999999999999999999998874 3 34676666
Q ss_pred cCCcchHHHHHHHH
Q psy13604 143 AEDGSGKGAGLASA 156 (167)
Q Consensus 143 a~dGSg~GAAl~aA 156 (167)
..+..-+|||..+.
T Consensus 310 ~~~a~~~GAa~la~ 323 (347)
T 2ch5_A 310 LRHSSALGGASLGA 323 (347)
T ss_dssp ESSCTHHHHHHHHH
T ss_pred cCCChHHHHHHHHH
Confidence 66756679987653
No 14
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.18 E-value=0.055 Score=44.24 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=59.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCCC---CcEEEEEcC---CcchHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPN---KTFRLLLAE---DGSGKGAG 152 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~---~~v~~~~a~---dGSg~GAA 152 (167)
+..+..++++..+.+++.+...++++ .|-+.|++.+..|.|.+.+++.+++..+. .++.+..++ |..-+|||
T Consensus 239 a~~i~~~~~~~L~~~i~~l~~~l~p~--~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa 316 (326)
T 2qm1_A 239 ALMVVDRVCFYLGLATGNLGNTLNPD--SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAA 316 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCS--EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHH
Confidence 77888999999999999999999875 57788999999999999999999887631 245566554 44567777
Q ss_pred HHH
Q psy13604 153 LAS 155 (167)
Q Consensus 153 l~a 155 (167)
..+
T Consensus 317 ~l~ 319 (326)
T 2qm1_A 317 SLA 319 (326)
T ss_dssp HHG
T ss_pred HHH
Confidence 653
No 15
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.99 E-value=0.25 Score=41.82 Aligned_cols=75 Identities=8% Similarity=0.067 Sum_probs=59.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCC-CCcEEEEEcC---CcchHHHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP-NKTFRLLLAE---DGSGKGAGLA 154 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~-~~~v~~~~a~---dGSg~GAAl~ 154 (167)
+.-+..++++..+.+++.+...++++. |-+.|++.+..|.|.+.+++.+++..+ ..++.+..++ |..-+|||..
T Consensus 291 a~~~l~~~~~~La~~i~~l~~~ldP~~--IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l 368 (380)
T 2hoe_A 291 VKEYFDDIARYFSIGLLNLIHLFGISK--IVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVH 368 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCE--EEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHH
Confidence 778899999999999999999998764 557799999889999999999988763 2345555543 4567888876
Q ss_pred H
Q psy13604 155 S 155 (167)
Q Consensus 155 a 155 (167)
+
T Consensus 369 ~ 369 (380)
T 2hoe_A 369 A 369 (380)
T ss_dssp H
T ss_pred H
Confidence 4
No 16
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=93.93 E-value=0.25 Score=40.77 Aligned_cols=76 Identities=14% Similarity=0.045 Sum_probs=60.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCC---CCcEEEEEcCCc---chHHH
Q psy13604 78 HNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP---NKTFRLLLAEDG---SGKGA 151 (167)
Q Consensus 78 ~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~---~~~v~~~~a~dG---Sg~GA 151 (167)
.+.-+..++++..+.+++.+..-++++. |-+.|++.+..|.|.+.+++.+++..+ ..++++..++-| .-+||
T Consensus 236 ~a~~~~~~~~~~La~~i~~l~~~ldP~~--IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GA 313 (321)
T 3r8e_A 236 LALAVWADIGTIIGESLVNIVRVMDLNN--ILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGA 313 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCE--EEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCE--EEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHH
Confidence 3778899999999999999999888754 556699998889999999999998873 245677777654 56787
Q ss_pred HHHH
Q psy13604 152 GLAS 155 (167)
Q Consensus 152 Al~a 155 (167)
|..+
T Consensus 314 a~l~ 317 (321)
T 3r8e_A 314 AGLI 317 (321)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 17
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=93.92 E-value=0.18 Score=40.77 Aligned_cols=75 Identities=13% Similarity=0.177 Sum_probs=57.6
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHH
Q psy13604 75 GAFHNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLA 154 (167)
Q Consensus 75 g~~~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~ 154 (167)
|...+..+..++++..+.+++.+...++++ .|-+.|++.+. |.|.+.+++.+++. +|..-..++..-+|||..
T Consensus 212 gd~~a~~il~~~~~~La~~i~~l~~~l~p~--~IvlgGgv~~~-~~~~~~l~~~~~~~----~i~~~~~~~~~~~GAa~l 284 (299)
T 2e2o_A 212 GDTVAMDILKQGAELLASQAVYLARKIGTN--KVYLKGGMFRS-NIYHKFFTLYLEKE----GIISDLGKRSPEIGAVIL 284 (299)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHTCS--EEEEESGGGGS-HHHHHHHHHHHHHT----TCEEECCSCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEECCccCc-HHHHHHHHHHCCCC----eEeccCCCCChHHHHHHH
Confidence 444488999999999999999999988765 46677999998 99999999888765 333322236667898876
Q ss_pred HH
Q psy13604 155 SA 156 (167)
Q Consensus 155 aA 156 (167)
+.
T Consensus 285 a~ 286 (299)
T 2e2o_A 285 AY 286 (299)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 18
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=91.61 E-value=0.5 Score=37.87 Aligned_cols=74 Identities=19% Similarity=0.104 Sum_probs=56.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEc---CCcchHHHHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLA---EDGSGKGAGLAS 155 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a---~dGSg~GAAl~a 155 (167)
+.-+..++++..+.+++.+...++++ .|-+.|++. ..|.|.+.+++.+++..+..++.+..+ +|..-+|||..+
T Consensus 210 a~~i~~~~~~~L~~~i~~l~~~l~p~--~ivlgG~~~-~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 210 AQQLIHRSARTLARLIADIKATTDCQ--CVVVGGSVG-LAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCS--EEEEEHHHH-TSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEeCccc-ccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 77788999999999999999988875 366889999 789999999999987642124455554 445667888654
No 19
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=90.22 E-value=1.9 Score=35.06 Aligned_cols=73 Identities=15% Similarity=0.078 Sum_probs=55.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcC---CcchHHHHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAE---DGSGKGAGLAS 155 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~---dGSg~GAAl~a 155 (167)
+.-+..++++..+.+++.++.-++++. |-+.|++.+. |.|.+.+++.+++..+ .++.+..++ |..-+|||..+
T Consensus 214 a~~~~~~~~~~La~~i~~l~~~~~p~~--IvlgGgi~~~-~~~~~~l~~~l~~~~~-~~~~i~~s~lg~~a~~~GAa~l~ 289 (297)
T 4htl_A 214 SERLITEFYTGICTGLYNLIYLFDPTH--IFIGGGITSR-PTFIAELKHHMESFGL-RDTIIETATHKNQAGLLGAVYHF 289 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSE--EEEESGGGGS-TTHHHHHHHHHTTTCC-TTCEEEECSCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeCccccc-HHHHHHHHHHHHHhcc-CCCeEEECCcCChHHHHhHHHHH
Confidence 678889999999999999998888764 6667999874 8899999999987654 245566554 44567877554
No 20
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=90.19 E-value=1.4 Score=37.80 Aligned_cols=74 Identities=9% Similarity=0.162 Sum_probs=59.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhC-C--CCcEEEEEc---CCcchHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-P--NKTFRLLLA---EDGSGKGAG 152 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~-~--~~~v~~~~a---~dGSg~GAA 152 (167)
+.-+..++++..+.+++.+..-++++ .|-+.|++.+..|.|.+.+++.+++.. | ..++.+..+ +| .-+|||
T Consensus 334 a~~il~~~~~~L~~~i~~l~~~ldP~--~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa 410 (429)
T 1z05_A 334 AVDVIQQLGRYLGAAIAIVINLFNPE--KILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGA 410 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCS--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHH
Confidence 67788999999999999999988875 467789999999999999999998874 3 124455544 56 788998
Q ss_pred HHH
Q psy13604 153 LAS 155 (167)
Q Consensus 153 l~a 155 (167)
..+
T Consensus 411 ~l~ 413 (429)
T 1z05_A 411 ALI 413 (429)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 21
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=90.03 E-value=2.7 Score=34.45 Aligned_cols=73 Identities=15% Similarity=0.066 Sum_probs=57.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCC----CCcEEEEEcCC---cchHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP----NKTFRLLLAED---GSGKGA 151 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~----~~~v~~~~a~d---GSg~GA 151 (167)
+..+..++++..+.+++.+...++++ .|-+.|++.+..|.|.+.+++.+++..+ ..++++..++- ..-+||
T Consensus 229 a~~~~~~~~~~La~~i~~l~~~l~p~--~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GA 306 (321)
T 3vgl_A 229 AVDSFRELARWAGAGLADLASLFDPS--AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGA 306 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCS--EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHH
Confidence 77888999999999999999999875 4666799999999999999999988763 23566776654 344566
Q ss_pred HH
Q psy13604 152 GL 153 (167)
Q Consensus 152 Al 153 (167)
|.
T Consensus 307 a~ 308 (321)
T 3vgl_A 307 AD 308 (321)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 22
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=89.69 E-value=1.5 Score=37.11 Aligned_cols=75 Identities=16% Similarity=0.108 Sum_probs=58.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhC-CC--CcEEEEE---cCCcchHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-PN--KTFRLLL---AEDGSGKGAG 152 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~-~~--~~v~~~~---a~dGSg~GAA 152 (167)
+..+..++++..+.+++.+...++++ .|-+.|++.+..|.|.+.+++.+++.. |. .++.+.. .+|..-+|||
T Consensus 311 a~~~l~~~~~~L~~~i~~l~~~ldP~--~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa 388 (406)
T 1z6r_A 311 AKDIITGVGAHVGRILAIMVNLFNPQ--KILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAA 388 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCS--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC--EEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHH
Confidence 67788999999999999999988875 466779999999999999999998874 31 2444554 4566788997
Q ss_pred HHH
Q psy13604 153 LAS 155 (167)
Q Consensus 153 l~a 155 (167)
++.
T Consensus 389 ~~~ 391 (406)
T 1z6r_A 389 LVK 391 (406)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 23
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=89.39 E-value=1.3 Score=36.07 Aligned_cols=75 Identities=16% Similarity=0.086 Sum_probs=57.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCccc-ccCcchHHHHHHHHHhhCC-CCcEEEEEcC---CcchHHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLY-KYHPRLKHWLQKYIQLLVP-NKTFRLLLAE---DGSGKGAGL 153 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~-e~~P~f~~~l~~~l~~l~~-~~~v~~~~a~---dGSg~GAAl 153 (167)
+..+..++++..+.+++.+..-++++ .|-+.|++. +..|.|.+.+++.+++..+ .....+..++ |..-+|||.
T Consensus 214 a~~~~~~~~~~l~~~i~~l~~~~~p~--~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~ 291 (302)
T 3vov_A 214 AERLVLQAARYVGIGLASLVKAFDPG--VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAAL 291 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCS--EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHH
Confidence 67788999999999999999888875 566779999 8889999999999998763 2222255554 445578876
Q ss_pred HH
Q psy13604 154 AS 155 (167)
Q Consensus 154 ~a 155 (167)
.+
T Consensus 292 l~ 293 (302)
T 3vov_A 292 TA 293 (302)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 24
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=89.00 E-value=1.3 Score=36.53 Aligned_cols=73 Identities=15% Similarity=0.193 Sum_probs=55.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCC--CCcEEEEEcCC---cchHHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP--NKTFRLLLAED---GSGKGAGL 153 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~--~~~v~~~~a~d---GSg~GAAl 153 (167)
+.-+..+.++..+.+++.+..-++++ .|-+.|++-+. +.|.+.+++.+++... ..++++..++- ..-+|||.
T Consensus 246 a~~~~~~~~~~La~~i~~l~~~l~p~--~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~ 322 (327)
T 4db3_A 246 AAEHVERFMELLAICFGNIFTANDPH--VVALGGGLSNF-ELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAF 322 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCS--EEEEESGGGGC-THHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeCcccch-HHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHH
Confidence 77788999999999999999988875 45567998875 7788899999988763 24567777754 45567775
Q ss_pred H
Q psy13604 154 A 154 (167)
Q Consensus 154 ~ 154 (167)
.
T Consensus 323 l 323 (327)
T 4db3_A 323 L 323 (327)
T ss_dssp T
T ss_pred H
Confidence 3
No 25
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=88.70 E-value=2.4 Score=33.94 Aligned_cols=75 Identities=16% Similarity=0.068 Sum_probs=56.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCC---C--CcEEEEEc---CCcchH
Q psy13604 78 HNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP---N--KTFRLLLA---EDGSGK 149 (167)
Q Consensus 78 ~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~---~--~~v~~~~a---~dGSg~ 149 (167)
.+.-+..++++..+.+++.+...++++ .|-+.|++. ..|.|.+.+++.+++..+ . .++.+..+ +|..-+
T Consensus 203 ~a~~i~~~~~~~L~~~i~~l~~~l~p~--~IvlgG~i~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~ 279 (292)
T 2gup_A 203 LCQEAIERMNRNLAQGLLNIQYLIDPG--VISLGGSIS-QNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLY 279 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCS--EEEEESGGG-GCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeCccc-cchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHH
Confidence 377788999999999999999988875 466789996 479999999999987652 1 33455544 455667
Q ss_pred HHHHHH
Q psy13604 150 GAGLAS 155 (167)
Q Consensus 150 GAAl~a 155 (167)
|||..+
T Consensus 280 GAa~~~ 285 (292)
T 2gup_A 280 GALVNW 285 (292)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888654
No 26
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=88.27 E-value=2.1 Score=35.16 Aligned_cols=73 Identities=11% Similarity=0.090 Sum_probs=52.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhC-C-CCcEEEEEc--CCcchHHHHH
Q psy13604 78 HNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-P-NKTFRLLLA--EDGSGKGAGL 153 (167)
Q Consensus 78 ~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~-~-~~~v~~~~a--~dGSg~GAAl 153 (167)
.+..+..++++..+.+++.+...++++ .|-+.|++. |.|.+.+++.+++.. | ..++.+..+ .|-.-+|||.
T Consensus 260 ~a~~il~~~~~~La~~i~~l~~~l~P~--~IvlgG~i~---~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~~~~GAa~ 334 (343)
T 2yhw_A 260 KAQSILRTAGTALGLGVVNILHTMNPS--LVILSGVLA---SHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAAS 334 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCS--EEEEESTTH---HHHHHHHHHHHHHHSCGGGTTCEEEECCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeCCcH---HHHHHHHHHHHHHhcccccCCcEEEEccCCCchHHHHHH
Confidence 377888999999999999999988875 466789986 578888888888764 2 123455554 4444567665
Q ss_pred HH
Q psy13604 154 AS 155 (167)
Q Consensus 154 ~a 155 (167)
.+
T Consensus 335 l~ 336 (343)
T 2yhw_A 335 MV 336 (343)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 27
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=87.56 E-value=0.69 Score=37.86 Aligned_cols=73 Identities=14% Similarity=0.221 Sum_probs=54.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCC--CCcEEEEEcC---CcchHHHHH
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP--NKTFRLLLAE---DGSGKGAGL 153 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~--~~~v~~~~a~---dGSg~GAAl 153 (167)
+.-+..++++..+.+++.+...++++ .|-+.|++.+..+.|.+ +++.+++..+ ..++.+..++ |..-+|||.
T Consensus 246 a~~il~~~~~~La~~i~~l~~~l~p~--~IvlgG~i~~~~~~~~~-l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~ 322 (327)
T 2ap1_A 246 AHAHVERYLDLLAVCLGNILTIVDPD--LLVIGGGLSNFTAITTQ-LAERLPRHLLPVARAPRIERARHGDAGGMRGAAF 322 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCS--EEEEESGGGGSTHHHHS-SGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeChhhcchhHHHH-HHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHH
Confidence 77788999999999999999888875 47788999988766665 7777776653 2356666654 555678775
Q ss_pred H
Q psy13604 154 A 154 (167)
Q Consensus 154 ~ 154 (167)
.
T Consensus 323 l 323 (327)
T 2ap1_A 323 L 323 (327)
T ss_dssp T
T ss_pred H
Confidence 4
No 28
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=84.50 E-value=5.1 Score=32.79 Aligned_cols=65 Identities=17% Similarity=0.260 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhC--C--CCcEEEEEcC---CcchHHHHHHH
Q psy13604 89 FSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV--P--NKTFRLLLAE---DGSGKGAGLAS 155 (167)
Q Consensus 89 L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~--~--~~~v~~~~a~---dGSg~GAAl~a 155 (167)
-.+.+++.++.-++++ .|-+.|++.+..+.|.+.+.+.+++.+ | ..++++..++ |..-+|||..+
T Consensus 226 ~~a~~la~l~~~~dP~--~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la 297 (310)
T 3htv_A 226 NAARAIATSINLFDPD--AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILA 297 (310)
T ss_dssp HHHHHHHHHHHHHCCS--EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC--EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHH
Confidence 3445666666666664 566779999988888888888888766 2 3467777765 44567777543
No 29
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=83.24 E-value=2.9 Score=34.12 Aligned_cols=65 Identities=18% Similarity=0.134 Sum_probs=43.7
Q ss_pred hhHHHHHHhHhCCC------CeEEEEcCcccccCcchHHHHHHHHHHhC--C----CCeEEEEEeccCCcchhhHHH
Q psy13604 4 FSGTAVLVRRIDRD------DITIAVDGSLYKYHPRLKHWLQKYIQLLV--P----NKTFRLLLAEDGSGKGAGLAS 68 (167)
Q Consensus 4 aa~iaail~~~~~~------~~~iavDGSv~e~~p~f~~~l~~~l~~l~--~----~~~v~~~~a~DGSg~GaA~~a 68 (167)
+.+++.++..++.+ ...|-+.|++.+..|.|.+.+++.+++.. + ..+|++..-.+..-.||+..+
T Consensus 246 a~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a~~~GAa~la 322 (347)
T 2ch5_A 246 GRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALGGASLG 322 (347)
T ss_dssp HHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSCTHHHHHHHH
T ss_pred HHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCChHHHHHHHH
Confidence 45666677766533 24788999999999999999999998764 2 234555444553334777544
No 30
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=81.92 E-value=7.7 Score=32.82 Aligned_cols=77 Identities=10% Similarity=0.059 Sum_probs=59.0
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCc---chHHH
Q psy13604 75 GAFHNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDG---SGKGA 151 (167)
Q Consensus 75 g~~~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dG---Sg~GA 151 (167)
|...+..+..+.++..+.+++.+..-+..+.-.|-+.|++.+..+.|.+.+++.++++. ++.+.+++.| .-+||
T Consensus 266 gd~~a~~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~---~~~i~~~~~~~~a~~~GA 342 (381)
T 1saz_A 266 GDEWAKRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIA---PVLVFPGSNEEKALALSA 342 (381)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTS---CEEEEEBCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhhc---CeEEEecCcchhHHHHHH
Confidence 44458889999999999999999998822223677789999987879999999998764 4778878776 34566
Q ss_pred HHH
Q psy13604 152 GLA 154 (167)
Q Consensus 152 Al~ 154 (167)
|..
T Consensus 343 a~l 345 (381)
T 1saz_A 343 LRV 345 (381)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 31
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=77.21 E-value=8.4 Score=31.54 Aligned_cols=79 Identities=10% Similarity=0.002 Sum_probs=54.2
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCccccc-CcchH-HHHHHHHHh------hCCCCcEEEEEcCCcc
Q psy13604 76 AFHNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKY-HPRLK-HWLQKYIQL------LVPNKTFRLLLAEDGS 147 (167)
Q Consensus 76 ~~~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~-~P~f~-~~l~~~l~~------l~~~~~v~~~~a~dGS 147 (167)
...+.-+..++++..+.+++.+..-++++. -|-+-|++... .|.|. +.+++.+++ ...+.+|.+...+|..
T Consensus 238 D~~A~~~~~~~~~~Lg~~i~~l~~~l~P~~-gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~ 316 (332)
T 1sz2_A 238 CTDCRRALSLFCVIMGRFGGNLALNLGTFG-GVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPG 316 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCTT-EEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCe-EEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchh
Confidence 445888999999999999999999998765 25567888875 33333 234444432 2234556666666777
Q ss_pred hHHHHHHH
Q psy13604 148 GKGAGLAS 155 (167)
Q Consensus 148 g~GAAl~a 155 (167)
-+|||..+
T Consensus 317 l~GAa~l~ 324 (332)
T 1sz2_A 317 LLGSGAHL 324 (332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88988654
No 32
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=75.82 E-value=9.8 Score=31.68 Aligned_cols=79 Identities=9% Similarity=-0.077 Sum_probs=56.0
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHH--HHHHHHHhhC-CC--------CcEEEEE-
Q psy13604 75 GAFHNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKH--WLQKYIQLLV-PN--------KTFRLLL- 142 (167)
Q Consensus 75 g~~~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~--~l~~~l~~l~-~~--------~~v~~~~- 142 (167)
|...+.-+..++++..+.+++.+...++.+ .|-+-|+...+.|.|.+ .+++.+++.+ +. .++.+..
T Consensus 277 gD~~a~~~l~~~~~~L~~~i~~l~~~l~p~--~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~ 354 (373)
T 2q2r_A 277 GDANACKAMKKYHEYLMRVGSEASMALLPL--TIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQ 354 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHCCS--EEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEE
Confidence 434488899999999999999999999876 47787885445588888 7777776543 21 2344444
Q ss_pred --cCCcchHHHHHHH
Q psy13604 143 --AEDGSGKGAGLAS 155 (167)
Q Consensus 143 --a~dGSg~GAAl~a 155 (167)
.+|..-+|||..+
T Consensus 355 ~~~~~a~l~GAa~l~ 369 (373)
T 2q2r_A 355 KKLLNLNLMGCYRCG 369 (373)
T ss_dssp CSCCCHHHHHHHHHH
T ss_pred ecCCchhHHHHHHHH
Confidence 3566778888654
No 33
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=75.58 E-value=14 Score=32.33 Aligned_cols=52 Identities=15% Similarity=0.085 Sum_probs=40.7
Q ss_pred CCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 102 DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 102 ~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
+.+--.|-++|+.- ++|.+.+.+.+.+ +.+|......+++.+|||++|+++.
T Consensus 398 g~~~~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~ 449 (508)
T 3ifr_A 398 GHAPQRFFASDGGT-RSRVWMGIMADVL-----QRPVQLLANPLGSAVGAAWVAAIGG 449 (508)
T ss_dssp TCCCCEEEEESGGG-GCHHHHHHHHHHH-----TSCEEEEECCSTHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCcc-cCHHHHHHHHHHh-----CCeEEecCCCCchHHHHHHHHHHHh
Confidence 33334577888865 7888888887776 4678888888999999999999874
No 34
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=74.70 E-value=4.3 Score=35.74 Aligned_cols=69 Identities=12% Similarity=-0.076 Sum_probs=52.0
Q ss_pred HHHHHHH---HHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHH-HHhhCCCCcEEEEEcCCcchHHHHHHHHHH
Q psy13604 83 SHNFIMF---SISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKY-IQLLVPNKTFRLLLAEDGSGKGAGLASAIA 158 (167)
Q Consensus 83 ~~RsA~L---~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~-l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a 158 (167)
..||+-- +|-.+.-++..++.. -.|-++|+. -++|.+.+.+-+. + +.+|.....++++.+|||+.|+++
T Consensus 364 l~RA~lE~~Gia~~~r~~l~~~~~~-~~i~~~GG~-a~s~~w~Qi~ADv~~-----g~pV~~~~~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 364 FERRAAACLYAALVADTALDLIGST-GRILVEGRF-AEADVFVRALASLRP-----DCAVYTANAHNDVSFGALRLIDPG 436 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC-SEEEEESGG-GGCHHHHHHHHHHST-----TSEEEEESSCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCC-CeEEEeCCc-ccCHHHHHHHhhhcC-----CCeEEEcCCCchHHHHHHHHhCcc
Confidence 4565543 456666677777755 468888886 4799998888776 6 567887788899999999999876
No 35
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=74.64 E-value=3.5 Score=33.23 Aligned_cols=61 Identities=23% Similarity=0.264 Sum_probs=43.6
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCC---CCeEEEEEeccC---CcchhhH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP---NKTFRLLLAEDG---SGKGAGL 66 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~---~~~v~~~~a~DG---Sg~GaA~ 66 (167)
+.+++.++..++.+ .|-+.|++.+..|.|.+.+++.+++... ..++.+..++-| .-.|++.
T Consensus 251 ~~~i~~l~~~l~p~--~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~ 317 (326)
T 2qm1_A 251 GLATGNLGNTLNPD--SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAAS 317 (326)
T ss_dssp HHHHHHHHHHHCCS--EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHH
T ss_pred HHHHHHHHHhcCCC--EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHH
Confidence 45677778888754 5888999999999999999999987753 134566665433 3346554
No 36
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=73.48 E-value=12 Score=33.24 Aligned_cols=48 Identities=13% Similarity=0.064 Sum_probs=38.8
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 106 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 106 ~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
-.|-++|+. -++|.+.+.+-+.+ +.+|.....++++.+|||++|+++.
T Consensus 444 ~~i~~~GG~-aks~~~~Qi~ADv~-----g~pV~~~~~~e~~alGAA~lA~~a~ 491 (554)
T 3l0q_A 444 DTMMASGGG-TKNPIFVQEHANAT-----GCAMLLPEESEAMLLGSAMMGTVAA 491 (554)
T ss_dssp CEEEEESGG-GGCHHHHHHHHHHH-----CCEEEEESCSCHHHHHHHHHHHHHT
T ss_pred CEEEEeCcc-ccCHHHHHHHHHhh-----CCeEEecCCCcchHHHHHHHHHHHc
Confidence 468888886 47899888887776 4577777778999999999999864
No 37
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=72.37 E-value=13 Score=32.78 Aligned_cols=52 Identities=13% Similarity=0.133 Sum_probs=40.7
Q ss_pred CCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 102 DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 102 ~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
+.+--.|-++|+.- ++|.+.+++-+.+ +.+|..-...+++.+|||++|+++.
T Consensus 400 g~~~~~i~v~GGga-ks~~~~Qi~ADvl-----g~pV~~~~~~E~~alGAA~lA~~a~ 451 (526)
T 3ezw_A 400 GIRLHALRVDGGAV-ANNFLMQFQSDIL-----GTRVERPEVREVTALGAAYLAGLAV 451 (526)
T ss_dssp CCCCSEEEEESGGG-GCHHHHHHHHHHH-----TSEEEEESCCCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECchh-hCHHHHHHHHHHH-----CCEEEeCCCCchHHHHHHHHHHHHh
Confidence 33334688888864 7888888877766 5678777788999999999999874
No 38
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=72.25 E-value=16 Score=32.28 Aligned_cols=49 Identities=12% Similarity=0.056 Sum_probs=39.6
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHH
Q psy13604 106 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALK 160 (167)
Q Consensus 106 ~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~~ 160 (167)
-.|-++|+.- ++|.+.+++.+.+ +.+|......+++.+|||++|+++..
T Consensus 426 ~~i~~~GGga-ks~~~~Qi~ADvl-----g~pV~~~~~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 426 TRILLIGGGA-KSEAIRTLAPSIL-----GMDVTRPATDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp CEEEEESGGG-GCHHHHHHHHHHH-----TSCEEEECCCCHHHHHHHHHHHHHHH
T ss_pred CEEEEECchh-cCHHHHHHHHHHh-----CCceEecCCcccHHHHHHHHHHHHcC
Confidence 4678888865 7899988888776 45677777789999999999998764
No 39
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=71.92 E-value=8.4 Score=34.34 Aligned_cols=50 Identities=14% Similarity=0.194 Sum_probs=41.0
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHH
Q psy13604 106 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALK 160 (167)
Q Consensus 106 ~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~~ 160 (167)
-.|-++|+.-+++|.+.+++-+.+ +.+|...-.++++.+|||++|+++.-
T Consensus 441 ~~i~~~GGga~ks~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 441 HELYACGGLPQKNHLLMQIFADVT-----NREIKVAASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp EEEEEESSHHHHCHHHHHHHHHHH-----TSCEEEBCCSSHHHHHHHHHHHHHHC
T ss_pred CEEEEEcCchhhCHHHHHHHHHHH-----CCeeEecCCCccHHHHHHHHHHHhcC
Confidence 468899998778999998888877 45677666788999999999998753
No 40
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=69.98 E-value=14 Score=30.05 Aligned_cols=74 Identities=7% Similarity=0.077 Sum_probs=53.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCC----------CCcEEEEEcC---C
Q psy13604 79 NFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP----------NKTFRLLLAE---D 145 (167)
Q Consensus 79 ~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~----------~~~v~~~~a~---d 145 (167)
+..+..+.++..+.+++.+..-++++.+. +.|.+.+. |.|.+.+++.+++.++ +.+..+..++ |
T Consensus 201 ~~~~~~~~~~~La~~i~nl~~~ldPe~Iv--iGGgi~~~-~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~ 277 (302)
T 3epq_A 201 IAQVWELEGYYIAQALAQYILILAPXXII--LGGGVMQQ-XQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSN 277 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCSCEE--EESSGGGC-THHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHCchhhh--cCchhhhh-HHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCCh
Confidence 45677888999999999999999986555 45888776 5588888888888652 1134466555 4
Q ss_pred cchHHHHHHH
Q psy13604 146 GSGKGAGLAS 155 (167)
Q Consensus 146 GSg~GAAl~a 155 (167)
..-+|||..+
T Consensus 278 a~l~GAa~l~ 287 (302)
T 3epq_A 278 AGIIGTLVLA 287 (302)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4567887654
No 41
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=69.04 E-value=15 Score=32.28 Aligned_cols=53 Identities=13% Similarity=0.124 Sum_probs=40.2
Q ss_pred CCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHH
Q psy13604 102 DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALK 160 (167)
Q Consensus 102 ~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~~ 160 (167)
+.+--.|-++|+.- ++|.+.+++.+.+ +.+|......+++.+|||++|+++.-
T Consensus 399 g~~~~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 399 GIRLHALRVDGGAV-ANNFLMQFQSDIL-----GTRVERPEVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp CCCCSEEEEESGGG-GCHHHHHHHHHHH-----TSEEEEESCCCHHHHHHHHHHHHHHT
T ss_pred CCCccEEEEeCchh-cCHHHHHHHHHHh-----CCceEecCCCCcHHHHHHHHHHHHhC
Confidence 33334677888864 8898888887776 45777767789999999999998753
No 42
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=68.73 E-value=6.3 Score=31.51 Aligned_cols=56 Identities=14% Similarity=0.284 Sum_probs=38.3
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEec--cCCcchhhHHH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAE--DGSGKGAGLAS 68 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~--DGSg~GaA~~a 68 (167)
+.+++.++..++.+ .|-+.|++.+. |.|.+.+++.+++. +| ..++ +..-.|++..+
T Consensus 228 a~~i~~l~~~l~p~--~IvlgGgv~~~-~~~~~~l~~~~~~~----~i--~~~~~~~~~~~GAa~la 285 (299)
T 2e2o_A 228 ASQAVYLARKIGTN--KVYLKGGMFRS-NIYHKFFTLYLEKE----GI--ISDLGKRSPEIGAVILA 285 (299)
T ss_dssp HHHHHHHHHHHTCS--EEEEESGGGGS-HHHHHHHHHHHHHT----TC--EEECCSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC--EEEEECCccCc-HHHHHHHHHHCCCC----eE--eccCCCCChHHHHHHHH
Confidence 45677777777643 57788999998 99999998888765 33 4444 33445776543
No 43
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=67.75 E-value=19 Score=31.47 Aligned_cols=48 Identities=13% Similarity=0.146 Sum_probs=38.5
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 106 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 106 ~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
-.|-++|+.- ++|.+.+.+.+.+ +.+|......+++.+|||++|+++.
T Consensus 395 ~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~ 442 (504)
T 3ll3_A 395 VAINATGGFL-KSDFVRQLCANIF-----NVPIVTMKEQQSGTLAAMFLARQAL 442 (504)
T ss_dssp SEEEEESGGG-CSHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHT
T ss_pred CEEEEeCchh-cCHHHHHHHHHhh-----CCeEEecCCCCchhHHHHHHHHHHc
Confidence 4677888865 7899888887776 4567776678899999999999874
No 44
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=67.71 E-value=17 Score=31.68 Aligned_cols=48 Identities=19% Similarity=0.247 Sum_probs=38.4
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 106 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 106 ~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
-.|-++|+.- ++|.+.+.+.+.+ +.+|......+++.+|||++|+++.
T Consensus 405 ~~i~~~GG~a-~s~~~~Qi~Adv~-----g~pV~~~~~~e~~alGaA~lA~~~~ 452 (504)
T 2d4w_A 405 TELRVDGGMV-ANELLMQFQADQL-----GVDVVRPKVAETTALGAAYAAGIAV 452 (504)
T ss_dssp CEEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHH
T ss_pred ceEEEeCCcc-cCHHHHHHHHHHh-----CCeEEeCCCCcchHHHHHHHHHhhc
Confidence 4577888876 7888888887776 4577777778899999999998874
No 45
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=67.52 E-value=9.4 Score=31.92 Aligned_cols=62 Identities=10% Similarity=0.110 Sum_probs=44.2
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCC-CCeEEEEEeccC---CcchhhHH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP-NKTFRLLLAEDG---SGKGAGLA 67 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~-~~~v~~~~a~DG---Sg~GaA~~ 67 (167)
+.+++.++..++.+ .|-+.|++.+..|.|.+.+++.+++..+ ..++.+..++-| .-.|++..
T Consensus 303 a~~i~~l~~~ldP~--~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l 368 (380)
T 2hoe_A 303 SIGLLNLIHLFGIS--KIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVH 368 (380)
T ss_dssp HHHHHHHHHHHCCC--EEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--EEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHH
Confidence 45677777777754 4667899999889999999999987653 245666766544 34576654
No 46
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=66.32 E-value=8.3 Score=31.41 Aligned_cols=62 Identities=18% Similarity=0.085 Sum_probs=44.1
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCC---CCeEEEEEeccC---CcchhhHH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP---NKTFRLLLAEDG---SGKGAGLA 67 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~---~~~v~~~~a~DG---Sg~GaA~~ 67 (167)
+.+++.++.-++.+ .|-+.|++.+..|.|.+.+++.+++... ..++++..++-| .-+|++..
T Consensus 249 a~~i~~l~~~ldP~--~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l 316 (321)
T 3r8e_A 249 GESLVNIVRVMDLN--NILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGL 316 (321)
T ss_dssp HHHHHHHHHHHCCC--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC--EEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHH
Confidence 45677777777653 4667799998889999999999987763 245677877654 33465543
No 47
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=64.62 E-value=13 Score=32.92 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=37.5
Q ss_pred EEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHH
Q psy13604 107 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALK 160 (167)
Q Consensus 107 ~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~~ 160 (167)
.|-++|+.- ++|.+.+++-+.+ +.+|......+++.+|||++|+++..
T Consensus 437 ~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 437 KILATGGAS-HNREILQVLADVF-----DAPVYVIDTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp CEEEEEGGG-GCHHHHHHHHHHH-----TSCEEECCCTTHHHHHHHHHHHHHHH
T ss_pred eEEEEcchh-cCHHHHHHHHHHh-----CCceEecCCCCchHHHHHHHHHHHhC
Confidence 466777765 7899988887777 45677766788999999999998754
No 48
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=64.32 E-value=24 Score=30.75 Aligned_cols=48 Identities=15% Similarity=0.257 Sum_probs=38.7
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 106 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 106 ~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
-.|-++|+.- ++|.+.+.+.+.+ +.+|......+++.+|||++|+++.
T Consensus 406 ~~i~~~GG~a-ks~~~~Qi~Adv~-----g~pV~~~~~~e~~alGaA~la~~a~ 453 (501)
T 3g25_A 406 QSLRVDGGAV-KNNFIMQFQADIV-----NTSVERPEIQETTALGAAFLAGLAV 453 (501)
T ss_dssp SEEEEESGGG-GCHHHHHHHHHHH-----TSEEEEESCCCHHHHHHHHHHHHHT
T ss_pred cEEEEecchh-cCHHHHHHHHHHh-----CCceEecCCCcchHHHHHHHHHHHh
Confidence 4677888864 8899988888776 4577777778999999999999864
No 49
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=63.65 E-value=18 Score=31.43 Aligned_cols=47 Identities=11% Similarity=0.177 Sum_probs=37.5
Q ss_pred EEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 107 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 107 ~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
.|-++|+.- ++|.+.+.+.+.+ +.+|......+++.+|||++|+++.
T Consensus 401 ~i~~~GG~a-~n~~~~q~~Adv~-----g~pV~~~~~~e~~alGaA~la~~a~ 447 (495)
T 2dpn_A 401 VLKADGGMA-QNRLFLKIQADLL-----GVPVAVPEVTETTALGAALMAGVGA 447 (495)
T ss_dssp CEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHH
T ss_pred EEEEecccc-cCHHHHHHHHHHh-----CCeeEecCCcccHHHHHHHHHHhhc
Confidence 477888865 7888888888776 4567766677899999999998874
No 50
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=63.21 E-value=21 Score=30.90 Aligned_cols=47 Identities=15% Similarity=0.112 Sum_probs=37.1
Q ss_pred EEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCc-chHHHHHHHHHHH
Q psy13604 107 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDG-SGKGAGLASAIAL 159 (167)
Q Consensus 107 ~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dG-Sg~GAAl~aA~a~ 159 (167)
.|-++|+.- ++|.+.+.+.+.+ +.+|.....++. +.+|||++|+++.
T Consensus 389 ~i~~~GG~a-~s~~~~Qi~Adv~-----g~pV~~~~~~e~~~alGAA~lA~~~~ 436 (484)
T 2itm_A 389 SVTLIGGGA-RSEYWRQMLADIS-----GQQLDYRTGGDVGPALGAARLAQIAA 436 (484)
T ss_dssp CEEEESGGG-CCHHHHHHHHHHH-----CCCEEEESCTTSCHHHHHHHHHHHHH
T ss_pred eEEEEeccc-cCHHHHHHHHHHh-----CCeEEeCCCCCcccHHHHHHHHHHHc
Confidence 477788875 7888888888776 457777777774 8999999999874
No 51
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=63.15 E-value=18 Score=31.38 Aligned_cols=60 Identities=17% Similarity=0.230 Sum_probs=42.1
Q ss_pred HHHHHHHhCCC--ceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 94 TAVLVRRIDRD--DITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 94 iaail~~~~~~--~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
+.-++..++.. --.|-++|+.- ++|.+.+.+.+.+ +.+|......+++.+|||++|+++.
T Consensus 381 ~~~~l~~l~~~~~~~~i~~~GG~a-~s~~~~Qi~Adv~-----g~pV~~~~~~e~~alGaA~lA~~~~ 442 (497)
T 2zf5_O 381 TRDVVDEMEKLVQIKELRVDGGAT-ANDFLMQFQADIL-----NRKVIRPVVKETTALGAAYLAGLAV 442 (497)
T ss_dssp HHHHHHHHTTTSCCCCEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCcceEEEeCccc-cCHHHHHHHHhhc-----CCeEEEcCCCcchHHHHHHHHHHHh
Confidence 33444555432 22466777766 7888888887776 4567766677899999999998874
No 52
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=61.93 E-value=19 Score=31.34 Aligned_cols=47 Identities=13% Similarity=0.259 Sum_probs=37.7
Q ss_pred EEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 107 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 107 ~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
.|-++|+.- ++|.+.+.+.+.+ +.+|......+++.+|||++|+++.
T Consensus 410 ~i~~~GG~a-~s~~~~Q~~Adv~-----g~pV~~~~~~e~~alGaA~la~~~~ 456 (503)
T 2w40_A 410 VLRCDGGMT-KNKPFMQFNSDII-----NTKIEVSKYKEVTSLGAAVLAGLEV 456 (503)
T ss_dssp CEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHT
T ss_pred eEEEeCccc-cCHHHHHHHHHHH-----CCeEEecCCCcchHHHHHHHHHHHh
Confidence 577888866 7888888888876 4567777777899999999998874
No 53
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=61.80 E-value=10 Score=33.40 Aligned_cols=47 Identities=11% Similarity=0.136 Sum_probs=37.7
Q ss_pred EEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 107 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 107 ~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
.|-++|+.- ++|.+.+.+-+.+ +.+|......+++.+|||++|+++.
T Consensus 428 ~i~~~GGga-ks~~~~Qi~ADvl-----g~pV~~~~~~e~~alGAA~lA~~a~ 474 (520)
T 4e1j_A 428 VLRVDGGMV-ASDWTMQRLSDLL-----DAPVDRPVILETTALGVAWLAGSRA 474 (520)
T ss_dssp CEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCCCHHHHHHHHHHHHHH
T ss_pred eEEEeCccc-cCHHHHHHHHHHh-----CCeEEecCCCccHHHHHHHHHHHHc
Confidence 477788864 7899988887776 4567776678999999999999874
No 54
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=61.34 E-value=9.4 Score=30.63 Aligned_cols=78 Identities=14% Similarity=-0.022 Sum_probs=51.6
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHH
Q psy13604 75 GAFHNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLA 154 (167)
Q Consensus 75 g~~~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~ 154 (167)
|...+.-+..++++..+.++ .+... .+...|-+-|+|.+. |.+.+++.+++..+ ++...++..-.||+..
T Consensus 208 GD~~A~~i~~~~~~~La~~i--~~~~~-~~p~~vvlgGGv~~~---~~~~l~~~l~~~~~----~i~~~~~a~~~GA~~l 277 (291)
T 1zbs_A 208 DIPAVYSLVQNSFDDFLVRN--VLRYN-RPDLPLHFIGSVAFH---YREVLSSVIKKRGL----TLGSVLQSPMEGLIQY 277 (291)
T ss_dssp TSHHHHHHHHHHHHHHHHHH--TGGGC-CTTSCEEEESHHHHH---THHHHHHHHHHTTC----CEEEEESCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH--hcccC-CCCceEEEECchHHh---hHHHHHHHHHHcCC----eecccCcCHHHHHHHH
Confidence 44448888899998888888 33332 123457777999876 66888888877643 2344558888999887
Q ss_pred HHHHHHHh
Q psy13604 155 SAIALKLG 162 (167)
Q Consensus 155 aA~a~~~~ 162 (167)
+.-..++.
T Consensus 278 a~~~~~~~ 285 (291)
T 1zbs_A 278 HHNNHVLE 285 (291)
T ss_dssp HHHCCC--
T ss_pred HHhhhhhc
Confidence 65433333
No 55
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=60.29 E-value=15 Score=31.09 Aligned_cols=54 Identities=15% Similarity=0.030 Sum_probs=46.9
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhC
Q psy13604 77 FHNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV 133 (167)
Q Consensus 77 ~~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~ 133 (167)
..+..+..+.++..+.+++.+..-+++ .|-+.|++.+..|.|.+.+++.+++.+
T Consensus 234 ~~a~~~l~~~~~~Lg~~i~nl~~~ldP---~IviGGgi~~~~~~~~~~l~~~l~~~~ 287 (366)
T 3mcp_A 234 EAAIAAFEELGEMAGDALASAITLIDG---LIVIGGGLSGASKYILPVLLKEMNAQT 287 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS---EEEEESGGGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC---EEEEEChhhhchHHHHHHHHHHHHHhc
Confidence 346777889999999999999888886 677789999999999999999998876
No 56
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=59.53 E-value=28 Score=30.41 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=38.0
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHH
Q psy13604 106 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 106 ~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a~ 159 (167)
-.|-++|+.- ++|.+.+.+-+.+ +.+|......+++.+|||++|+++.
T Consensus 405 ~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~ 452 (506)
T 3h3n_X 405 PLLKVDGGAA-KNDLLMQFQADIL-----DIDVQRAANLETTALGAAYLAGLAV 452 (506)
T ss_dssp CEEEEESGGG-GCHHHHHHHHHHH-----TSEEEECSSSCHHHHHHHHHHHHHT
T ss_pred CEEEEecccc-cCHHHHHHHHHHh-----CCeEEecCCCcchhHHHHHHHHHHh
Confidence 4677888865 7898888888776 4567666678899999999999864
No 57
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=59.50 E-value=4.3 Score=32.65 Aligned_cols=73 Identities=11% Similarity=-0.043 Sum_probs=51.1
Q ss_pred HhccccchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHH
Q psy13604 73 KLGAFHNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAG 152 (167)
Q Consensus 73 ~lg~~~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAA 152 (167)
+.|.+.+..+..++++..+.++ .+..+ .+...|.+-|+|.+. |.+.+++.+++ |.. .+...+|..-+|||
T Consensus 204 ~~GD~~A~~i~~~~~~~La~~i--~~~~~-~~p~~vvlgGGv~~~---l~~~l~~~l~~--~~~--~i~~~~~a~~~GAa 273 (291)
T 1zxo_A 204 HLEEPAIRQLVMNSFIAFFRRN--VMQYD-YKQYPVHFIGSIAYC---YKEILQDAARQ--TGI--QIGKILQSPMEGLI 273 (291)
T ss_dssp TTTSTTTTHHHHHHHHHHHTTT--GGGSC-TTTSCEEECSHHHHH---THHHHHHHTTT--TTC--CEEEECSCTHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHH--hcccC-CCCceEEEECcHHHH---HHHHHHHHHhc--CCc--EEeecCCCHHHHHH
Confidence 3455558899999999988888 22322 133456788999877 88888888876 543 44466777778998
Q ss_pred HHH
Q psy13604 153 LAS 155 (167)
Q Consensus 153 l~a 155 (167)
..+
T Consensus 274 ~la 276 (291)
T 1zxo_A 274 QYH 276 (291)
T ss_dssp TTS
T ss_pred HHH
Confidence 764
No 58
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=56.50 E-value=22 Score=28.86 Aligned_cols=54 Identities=19% Similarity=0.138 Sum_probs=40.6
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCC----CCeEEEEEeccC
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP----NKTFRLLLAEDG 59 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~----~~~v~~~~a~DG 59 (167)
+.+++.++..++.+ .|-+.|++.+..|.|.+.+++.+++... ..++++..++-|
T Consensus 241 a~~i~~l~~~l~p~--~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~ 298 (321)
T 3vgl_A 241 GAGLADLASLFDPS--AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLG 298 (321)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTG
T ss_pred HHHHHHHHHHhCCC--EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCC
Confidence 45677777777754 5677899999999999999999987653 245677777643
No 59
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=53.89 E-value=10 Score=33.34 Aligned_cols=48 Identities=15% Similarity=0.023 Sum_probs=37.6
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHhhCCCCcE-EEEEcCCcchHHHHHHHHHHH
Q psy13604 106 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTF-RLLLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 106 ~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v-~~~~a~dGSg~GAAl~aA~a~ 159 (167)
-.|-++|+. -++|.+.+.+-+.+ +.+| .....++++.+|||++|+++.
T Consensus 404 ~~i~~~GGg-a~s~~~~Qi~ADv~-----g~pV~~~~~~~e~~alGaA~lA~~a~ 452 (511)
T 3hz6_A 404 GLLKVVGGG-ARSEAWLRMIADNL-----NVSLLVKPDAHLHPLRGLAALAAVEL 452 (511)
T ss_dssp CEEEEESGG-GGCHHHHHHHHHHH-----TCEEEECCCGGGHHHHHHHHHHHHHT
T ss_pred CEEEEeCch-hcCHHHHHHHHHHH-----CCeeEEecCCCCchHHHHHHHHHHHh
Confidence 357788887 58999988888776 4566 555578899999999999763
No 60
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=51.44 E-value=17 Score=28.65 Aligned_cols=65 Identities=12% Similarity=0.049 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEE-EcCCcchHHHHHHHH
Q psy13604 83 SHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLL-LAEDGSGKGAGLASA 156 (167)
Q Consensus 83 ~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~-~a~dGSg~GAAl~aA 156 (167)
..+.++..+.+++.+..-++++ .|-+.|++.+..|.|.+.++ .+.+|.+. +.+|..-+|||..+.
T Consensus 195 ~~~~~~~l~~~l~~l~~~ldP~--~IvlgG~i~~~~~~~~~~~~-------~~~~i~~s~l~~~a~~~GAa~l~~ 260 (267)
T 1woq_A 195 WDEYSVLLQRYFSHVEFLFSPE--LFIVGGGISKRADEYLPNLR-------LRTPIVPAVLRNEAGIVGAAIEIA 260 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCS--EEEEESGGGGGGGGTGGGCC-------CSSCEEECSCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCC--EEEEeChhhcccHHHHHhhc-------cCceEEECCcCCcHHHHHHHHHHH
Confidence 3567777888888888888865 46678999988877765543 22233332 235667788887653
No 61
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=50.90 E-value=20 Score=28.30 Aligned_cols=61 Identities=20% Similarity=0.101 Sum_probs=40.9
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccC---CcchhhHH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDG---SGKGAGLA 67 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DG---Sg~GaA~~ 67 (167)
+.+++.++..++.+ .|-+.|++. ..|.|.+.+++.+++.....++.+..++-| .-.|++..
T Consensus 222 ~~~i~~l~~~l~p~--~ivlgG~~~-~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l 285 (289)
T 2aa4_A 222 ARLIADIKATTDCQ--CVVVGGSVG-LAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALL 285 (289)
T ss_dssp HHHHHHHHHHHCCS--EEEEEHHHH-TSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC--EEEEeCccc-ccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHH
Confidence 45667777777654 477889999 789999999999876532234566666544 23466543
No 62
>3ejx_A DAP epimerase, diaminopimelate epimerase, chloroplastic; PLP-independenet amino acid racemase, aziridino-diaminopimelate, isomerase; HET: ZDP; 1.95A {Arabidopsis thaliana} PDB: 3ekm_A*
Probab=50.86 E-value=0.84 Score=38.81 Aligned_cols=71 Identities=11% Similarity=0.141 Sum_probs=35.2
Q ss_pred CcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHhCCC
Q psy13604 25 GSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGAFHNFIMSHNFIMFSISGTAVLVRRIDRD 104 (167)
Q Consensus 25 GSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg~~~~~~V~~RsA~L~Aa~iaail~~~~~~ 104 (167)
|..+|+||.|++..+=-+-+.+....|++..-|-|+|.=.|-=+ --||++++++++..-..
T Consensus 213 Gp~ie~h~~FP~g~NV~Fv~v~~~~~i~~Rv~ERGvGeTlACGT-------------------GacAaavaa~~~g~~~~ 273 (317)
T 3ejx_A 213 GPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGT-------------------GACALVVAAVLEGRADR 273 (317)
T ss_dssp HHHHHTCTTCTTCCEEEEEEEEETTEEEEEEEBTTTBSCSCCHH-------------------HHHHHHHHHHHTTSSCS
T ss_pred hhhhccCCcCCCCcEEEEEEEccCCEEEEEEEECCCCcccCchH-------------------HHHHHHHHHHHhCCCCC
Confidence 44555555554422211111222345677777777654222111 24566677766543334
Q ss_pred ceEEEEcCcc
Q psy13604 105 DITIAVDGSL 114 (167)
Q Consensus 105 ~~~IavDGSv 114 (167)
+++|-.+|.-
T Consensus 274 ~v~V~~pGG~ 283 (317)
T 3ejx_A 274 KCTVDLPGGP 283 (317)
T ss_dssp EEEEEETTEE
T ss_pred eEEEECCCCE
Confidence 6777777764
No 63
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=50.40 E-value=9 Score=30.85 Aligned_cols=67 Identities=16% Similarity=0.057 Sum_probs=47.5
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhCCCceEEEEcCcccc-cCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHH
Q psy13604 75 GAFHNFIMSHNFIMFSISGTAVLVRRIDRDDITIAVDGSLYK-YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGL 153 (167)
Q Consensus 75 g~~~~~~V~~RsA~L~Aa~iaail~~~~~~~~~IavDGSv~e-~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl 153 (167)
|...+..+..++++..+.+++.+... ++ -.|-+-|++.+ ..|.|.+.+++.+ . ..++..-+|||.
T Consensus 224 GD~~A~~i~~~~~~~L~~~l~~l~~~-~p--~~VvlgGgv~~~~~~~l~~~l~~~i---~--------~~~~~~~~GAa~ 289 (305)
T 1zc6_A 224 VDPEADALLRQAGEDAWAIARALDPQ-DE--LPVALCGGLGQALRDWLPPGFRQRL---V--------APQGDSAQGALL 289 (305)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHCTT-CC--SCEEEESHHHHHTGGGSCHHHHHHC---C--------CCSSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcC-CC--CeEEEECCchHhHHHHHHHHHHhhc---c--------CCCCCHHHHHHH
Confidence 33448999999999999999988754 43 45667799986 4677777776642 1 134566789987
Q ss_pred HH
Q psy13604 154 AS 155 (167)
Q Consensus 154 ~a 155 (167)
.+
T Consensus 290 la 291 (305)
T 1zc6_A 290 LL 291 (305)
T ss_dssp HT
T ss_pred HH
Confidence 65
No 64
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=49.47 E-value=35 Score=28.88 Aligned_cols=62 Identities=11% Similarity=0.208 Sum_probs=43.9
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhC-C--CCeEEEEEe---ccCCcchhhHHH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-P--NKTFRLLLA---EDGSGKGAGLAS 68 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~-~--~~~v~~~~a---~DGSg~GaA~~a 68 (167)
+.+++.++.-++.+ .|-+.|++.+..|.|.+.+++.+++.. + ..++.+..+ +| .-+|++..+
T Consensus 346 ~~~i~~l~~~ldP~--~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~ 413 (429)
T 1z05_A 346 GAAIAIVINLFNPE--KILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALI 413 (429)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHH
T ss_pred HHHHHHHHHhcCCC--EEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHH
Confidence 45677777777654 477889999999999999999998764 2 134556655 44 566877643
No 65
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=46.35 E-value=52 Score=27.40 Aligned_cols=62 Identities=19% Similarity=0.202 Sum_probs=43.2
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhC-C--CCeEEEEEec---cCCcchhhHH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-P--NKTFRLLLAE---DGSGKGAGLA 67 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~-~--~~~v~~~~a~---DGSg~GaA~~ 67 (167)
+.+++.++.-++.+ .|-+.|++.+..|.|.+.+++.+++.. + ..++.+..++ |..-+|+++.
T Consensus 323 ~~~i~~l~~~ldP~--~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~ 390 (406)
T 1z6r_A 323 GRILAIMVNLFNPQ--KILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALV 390 (406)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHH
T ss_pred HHHHHHHHHhcCCC--EEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHH
Confidence 45677777777654 477789999999999999999998763 2 1345556553 4455688543
No 66
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=43.86 E-value=35 Score=26.91 Aligned_cols=61 Identities=18% Similarity=0.145 Sum_probs=40.2
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCC---C--CeEEEEEeccC---CcchhhHH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP---N--KTFRLLLAEDG---SGKGAGLA 67 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~---~--~~v~~~~a~DG---Sg~GaA~~ 67 (167)
+.+++.++..++.+ .|-+.|++. ..|.|.+.+++.+++..+ . .++.+..++-| .-.|++..
T Consensus 216 ~~~i~~l~~~l~p~--~IvlgG~i~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~ 284 (292)
T 2gup_A 216 AQGLLNIQYLIDPG--VISLGGSIS-QNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVN 284 (292)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGG-GCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--EEEEeCccc-cchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHH
Confidence 45667777777644 477889996 479999999999876542 1 34566666433 33466654
No 67
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=41.00 E-value=53 Score=26.19 Aligned_cols=59 Identities=17% Similarity=0.134 Sum_probs=39.9
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCC---cchhhH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGS---GKGAGL 66 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGS---g~GaA~ 66 (167)
+.+++.++.-++.+ .|-+.|++.+. |.|.+.+++.++.... .++.+..++-|. -+|++.
T Consensus 226 a~~i~~l~~~~~p~--~IvlgGgi~~~-~~~~~~l~~~l~~~~~-~~~~i~~s~lg~~a~~~GAa~ 287 (297)
T 4htl_A 226 CTGLYNLIYLFDPT--HIFIGGGITSR-PTFIAELKHHMESFGL-RDTIIETATHKNQAGLLGAVY 287 (297)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGS-TTHHHHHHHHHTTTCC-TTCEEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--EEEEeCccccc-HHHHHHHHHHHHHhcc-CCCeEEECCcCChHHHHhHHH
Confidence 45667777777654 46678999974 8899999998876543 345677776553 346654
No 68
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=37.45 E-value=1.4e+02 Score=24.04 Aligned_cols=61 Identities=18% Similarity=0.308 Sum_probs=42.1
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhC----CCCeEEEEEeccCC---cchhhH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV----PNKTFRLLLAEDGS---GKGAGL 66 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~----~~~~v~~~~a~DGS---g~GaA~ 66 (167)
+.+++.++.-++.+ .|-+.|++.+..+.|.+.+.+.+++.+ +..+++++.++-|. -+||+.
T Consensus 228 a~~la~l~~~~dP~--~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~ 295 (310)
T 3htv_A 228 ARAIATSINLFDPD--AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAI 295 (310)
T ss_dssp HHHHHHHHHHHCCS--EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHH
T ss_pred HHHHHHHHHhhCCC--EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHH
Confidence 34566666666643 567779999988888888888887665 23567888887553 235553
No 69
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=37.35 E-value=65 Score=25.78 Aligned_cols=62 Identities=21% Similarity=0.127 Sum_probs=41.3
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCccc-ccCcchHHHHHHHHHHhCC-CCeEEEEEeccC---CcchhhHH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLY-KYHPRLKHWLQKYIQLLVP-NKTFRLLLAEDG---SGKGAGLA 67 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~-e~~p~f~~~l~~~l~~l~~-~~~v~~~~a~DG---Sg~GaA~~ 67 (167)
+.+++.++.-++.+ .|-+.|++. +..|.|.+.+++.+++... .....+..++-| .-+||+..
T Consensus 226 ~~~i~~l~~~~~p~--~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l 292 (302)
T 3vov_A 226 GIGLASLVKAFDPG--VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALT 292 (302)
T ss_dssp HHHHHHHHHHHCCS--EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC--EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHH
Confidence 45666777777644 577789999 8889999999999987652 222225555543 33466653
No 70
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=35.90 E-value=71 Score=25.33 Aligned_cols=46 Identities=11% Similarity=0.102 Sum_probs=31.1
Q ss_pred EEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCC-cchHHHHHHHHHH
Q psy13604 107 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAED-GSGKGAGLASAIA 158 (167)
Q Consensus 107 ~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~d-GSg~GAAl~aA~a 158 (167)
.|-+.|++. ++|.+++.+.+.+. .+|.+-...+ ...+|||+.|.-.
T Consensus 211 ~i~~~GG~a-~n~~~~~~~~~~lg-----~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 211 DVVMTGGVA-QNYGVRGALEEGLG-----VEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp SEEEESGGG-GCHHHHHHHHHHHC-----SCEECCGGGGGHHHHHHHHHHHHH
T ss_pred eEEEeCccc-cCHHHHHHHHHHHC-----CCeEeCCCcchHhHHHHHHHHHHh
Confidence 477788866 58999999988873 2333322223 4789999988654
No 71
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=35.27 E-value=79 Score=27.48 Aligned_cols=51 Identities=16% Similarity=0.115 Sum_probs=38.0
Q ss_pred CCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHH
Q psy13604 15 DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (167)
Q Consensus 15 ~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~ 71 (167)
+.+-..|-++|+.- ++|.+.+++.+.+ +.+|......+++.+|+|+++++.
T Consensus 398 g~~~~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a 448 (508)
T 3ifr_A 398 GHAPQRFFASDGGT-RSRVWMGIMADVL-----QRPVQLLANPLGSAVGAAWVAAIG 448 (508)
T ss_dssp TCCCCEEEEESGGG-GCHHHHHHHHHHH-----TSCEEEEECCSTHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCcc-cCHHHHHHHHHHh-----CCeEEecCCCCchHHHHHHHHHHH
Confidence 44434577788765 7888877776655 357777777889999999999887
No 72
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=34.61 E-value=36 Score=25.89 Aligned_cols=57 Identities=12% Similarity=0.107 Sum_probs=41.1
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhccc
Q psy13604 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGAF 77 (167)
Q Consensus 19 ~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg~~ 77 (167)
+.+=+||+|+.....+.+ ..++|+.+.. ..+.+.++-..|++...-.......+|.+
T Consensus 11 i~~DlDGTLl~~~~~~~~-~~~ai~~l~~-~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 11 YIIDIDGVIGKSVTPIPE-GVEGVKKLKE-LGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp EEEECBTTTEETTEECHH-HHHHHHHHHH-TTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred EEEcCcCcEECCCEeCcC-HHHHHHHHHH-cCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 445678999987766654 6778877753 35666777777888877777777888875
No 73
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=33.83 E-value=1.2e+02 Score=25.80 Aligned_cols=46 Identities=9% Similarity=-0.087 Sum_probs=34.3
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHH
Q psy13604 106 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 158 (167)
Q Consensus 106 ~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~aA~a 158 (167)
-.|-++|+.- ++|.+.+.+-+.+ +.+|.... .+++.+|||++|+.+
T Consensus 395 ~~i~~~GGga-ks~~~~Qi~ADvl-----g~pV~~~~-~e~~alGaa~~A~~a 440 (489)
T 2uyt_A 395 SQLHIVGGGC-QNTLLNQLCADAC-----GIRVIAGP-VEASTLGNIGIQLMT 440 (489)
T ss_dssp SEEEEESGGG-GCHHHHHHHHHHH-----TSEEEECC-TTHHHHHHHHHHHHH
T ss_pred CEEEEeCChh-hhHHHHHHHHHHH-----CCeeecCC-ccHhHHHHHHHHHHH
Confidence 3577888876 7888888888777 44665433 789999998877665
No 74
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=33.82 E-value=29 Score=30.88 Aligned_cols=50 Identities=20% Similarity=0.355 Sum_probs=36.9
Q ss_pred EEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEc------CCcchHHHHHHHHHH
Q psy13604 107 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLA------EDGSGKGAGLASAIA 158 (167)
Q Consensus 107 ~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a------~dGSg~GAAl~aA~a 158 (167)
.|-.-||- .+|+|.+||++-|+.+.|+.+|++... +-.+=+|+++.|...
T Consensus 417 IvLsGGst--~~pGf~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsilasl~ 472 (498)
T 3qb0_A 417 VVLTGGTS--SIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTSLG 472 (498)
T ss_dssp EEEESGGG--GSTTHHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHHHTCH
T ss_pred EEEeCCcc--CchhHHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEEecCc
Confidence 45555554 479999999999999999767777654 245668888887543
No 75
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=33.37 E-value=33 Score=27.50 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=22.7
Q ss_pred HHHHHHhhC---CCCcEEEEEcCCcchHHHHHHHHHHHHHh
Q psy13604 125 LQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 162 (167)
Q Consensus 125 l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~aA~a~~~~ 162 (167)
+.+.+++++ |+.+|.+. |-++|+|+++-.+..+.
T Consensus 110 ~~~~l~~~~~~~p~~~i~vt----GHSLGGalA~l~a~~l~ 146 (258)
T 3g7n_A 110 IITEVKALIAKYPDYTLEAV----GHSLGGALTSIAHVALA 146 (258)
T ss_dssp HHHHHHHHHHHSTTCEEEEE----EETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEe----ccCHHHHHHHHHHHHHH
Confidence 344444443 66677666 99999999886665543
No 76
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=33.19 E-value=67 Score=26.89 Aligned_cols=53 Identities=11% Similarity=0.174 Sum_probs=38.6
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccC
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDG 59 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DG 59 (167)
+.+|+.++.-++.+.-.|-+.|++.+..+.|.+.+++.++.+. ++.+.+++.|
T Consensus 282 a~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~---~~~i~~~~~~ 334 (381)
T 1saz_A 282 AKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIA---PVLVFPGSNE 334 (381)
T ss_dssp HHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTS---CEEEEEBCCH
T ss_pred HHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhhc---CeEEEecCcc
Confidence 4567777777722234577889999987779999999887765 5677777765
No 77
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=33.07 E-value=36 Score=27.98 Aligned_cols=35 Identities=14% Similarity=0.311 Sum_probs=23.8
Q ss_pred HHHHHHhhC---CCCcEEEEEcCCcchHHHHHHHHHHHHHhh
Q psy13604 125 LQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLGA 163 (167)
Q Consensus 125 l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~aA~a~~~~~ 163 (167)
+.+.+++++ |+.++.+. |-++|+|+++-.+..+..
T Consensus 140 i~~~l~~~~~~~p~~~i~vt----GHSLGGalA~l~a~~l~~ 177 (301)
T 3o0d_A 140 IGPKLDSVIEQYPDYQIAVT----GHSLGGAAALLFGINLKV 177 (301)
T ss_dssp HHHHHHHHHHHSTTSEEEEE----EETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCceEEEe----ccChHHHHHHHHHHHHHh
Confidence 444455543 66777776 999999998877665543
No 78
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=32.11 E-value=44 Score=27.17 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=37.0
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhC-C-CCeEEEEEeccC
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-P-NKTFRLLLAEDG 59 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~-~-~~~v~~~~a~DG 59 (167)
+.+++.++.-++.+ .|-+.|++.+. +.|.+.+++.+++.. + ..++++..++-|
T Consensus 258 a~~i~~l~~~l~p~--~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg 312 (327)
T 4db3_A 258 AICFGNIFTANDPH--VVALGGGLSNF-ELIYEEMPKRVPKYLLSVAKCPKIIKAKHG 312 (327)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGC-THHHHHHHHHGGGGSCTTCCCCEEEECSCG
T ss_pred HHHHHHHHHHhCCC--EEEEeCcccch-HHHHHHHHHHHHHHhccccCCCEEEECCCC
Confidence 45677777777654 46667998875 778888888887665 2 346777777644
No 79
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=31.37 E-value=41 Score=26.95 Aligned_cols=37 Identities=27% Similarity=0.373 Sum_probs=24.8
Q ss_pred HHHHHHHHHhhC---CCCcEEEEEcCCcchHHHHHHHHHHHHHh
Q psy13604 122 KHWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 162 (167)
Q Consensus 122 ~~~l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~aA~a~~~~ 162 (167)
.+.+.+.++++. |+.++.+. |-++|+|+++-.+..+.
T Consensus 120 ~~~~~~~l~~~~~~~p~~~i~vt----GHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 120 RDDIIKELKEVVAQNPNYELVVV----GHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEE----ecCHHHHHHHHHHHHHH
Confidence 344555555554 56666666 99999999887766654
No 80
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=31.07 E-value=74 Score=27.75 Aligned_cols=60 Identities=13% Similarity=-0.039 Sum_probs=42.6
Q ss_pred hHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHH-HHHhCCCCeEEEEEeccCCcchhhHHHHHH
Q psy13604 5 SGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKY-IQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (167)
Q Consensus 5 a~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~-l~~l~~~~~v~~~~a~DGSg~GaA~~aav~ 71 (167)
..+.-++..+... ..|-++|.. -++|.+.+++-+. + +.+|...-.++++.+|+|+++++.
T Consensus 376 ~~~r~~l~~~~~~-~~i~~~GG~-a~s~~w~Qi~ADv~~-----g~pV~~~~~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 376 LVADTALDLIGST-GRILVEGRF-AEADVFVRALASLRP-----DCAVYTANAHNDVSFGALRLIDPG 436 (482)
T ss_dssp HHHHHHHHHTTCC-SEEEEESGG-GGCHHHHHHHHHHST-----TSEEEEESSCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHhcCC-CeEEEeCCc-ccCHHHHHHHhhhcC-----CCeEEEcCCCchHHHHHHHHhCcc
Confidence 3444566666544 467788886 4788877776654 4 357777777889999999988775
No 81
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=30.46 E-value=37 Score=27.54 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=23.8
Q ss_pred HHHHHHHhhC---CCCcEEEEEcCCcchHHHHHHHHHHHHHh
Q psy13604 124 WLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 162 (167)
Q Consensus 124 ~l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~aA~a~~~~ 162 (167)
.+.+.+++++ |+.++.+. |-++|+|++.-.+..+.
T Consensus 123 ~~~~~l~~~~~~~p~~~l~vt----GHSLGGalA~l~a~~l~ 160 (279)
T 3uue_A 123 DIFTAVKKYKKEKNEKRVTVI----GHSLGAAMGLLCAMDIE 160 (279)
T ss_dssp HHHHHHHHHHHHHTCCCEEEE----EETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEc----ccCHHHHHHHHHHHHHH
Confidence 3444555554 67777776 99999999887665544
No 82
>3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis}
Probab=30.16 E-value=1.2e+02 Score=19.99 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=38.9
Q ss_pred HHHHhHhCC--CCeEEEEcCcccccCcchHHHHHHHHHHhC-------CCCe----------EEEEEeccCC-------c
Q psy13604 8 AVLVRRIDR--DDITIAVDGSLYKYHPRLKHWLQKYIQLLV-------PNKT----------FRLLLAEDGS-------G 61 (167)
Q Consensus 8 aail~~~~~--~~~~iavDGSv~e~~p~f~~~l~~~l~~l~-------~~~~----------v~~~~a~DGS-------g 61 (167)
..++..+.. .++.+-+++......+..+..+...+.+|+ +... +.+.+.++|. |
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~il~nll~NA~k~~~~~~i~i~~~~~~~~~i~v~D~G~gi~~~~~G 91 (129)
T 3zxo_A 12 DAAVAQFADSGLRTSVQFVGPLSVVDSALADQAEAVVREAVSNAVRHAAASTLTVRVKVDDDLCIEVTDNGRGMPDEFTG 91 (129)
T ss_dssp HHHHHHHSCTTSEEEEEEESCGGGSCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEEEESSEEEEEEEECCCCCTTTTCS
T ss_pred HHHHHHHhhcCceEEEEecCCcccCCHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEcCCEEEEEecCCCCCCcccCC
Confidence 334444432 256677788776655665777777777765 1222 5566667774 4
Q ss_pred chhhHHHHHHHHh
Q psy13604 62 KGAGLASAIALKL 74 (167)
Q Consensus 62 ~GaA~~aav~~~l 74 (167)
.|.+++..+...+
T Consensus 92 lGL~i~~~~~~~~ 104 (129)
T 3zxo_A 92 SGLTNLRQRAEQA 104 (129)
T ss_dssp HHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHc
Confidence 5555555554444
No 83
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=29.90 E-value=28 Score=26.74 Aligned_cols=57 Identities=18% Similarity=0.287 Sum_probs=39.6
Q ss_pred EEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhcccc
Q psy13604 20 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGAFH 78 (167)
Q Consensus 20 ~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg~~~ 78 (167)
.+=+||+|+.....+ ....++|+++.. ..+.+.++-..||+...-+......+|.+.
T Consensus 9 ~~DlDGTLl~~~~~i-~~~~eal~~l~~-~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 9 LIDLDGTIYKGKSRI-PAGERFIERLQE-KGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EECCBTTTEETTEEC-HHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EEeCCCceEeCCEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 344589999877777 567778877753 234456666677887777777777888753
No 84
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=29.89 E-value=45 Score=27.53 Aligned_cols=49 Identities=16% Similarity=0.329 Sum_probs=35.1
Q ss_pred EEEEcCcccccCcchHHHHHHHHHhhCCC-CcEEEEEcC---CcchHHHHHHHHH
Q psy13604 107 TIAVDGSLYKYHPRLKHWLQKYIQLLVPN-KTFRLLLAE---DGSGKGAGLASAI 157 (167)
Q Consensus 107 ~IavDGSv~e~~P~f~~~l~~~l~~l~~~-~~v~~~~a~---dGSg~GAAl~aA~ 157 (167)
.|=+-|+ -..|+|++++++.+..+.|. .++.+...+ ...-+|+++.+..
T Consensus 297 IvLtGG~--s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 297 NVMSGGT--TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp EEEESGG--GCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred cEeeCCC--CCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCc
Confidence 5556666 45799999999999999984 456555443 3567888887763
No 85
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=29.35 E-value=65 Score=28.33 Aligned_cols=47 Identities=13% Similarity=0.073 Sum_probs=35.7
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHH
Q psy13604 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (167)
Q Consensus 19 ~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~ 71 (167)
..|-++|+. -++|.+.+++-+.+ +.+|...-..+++..|+|+++++.
T Consensus 444 ~~i~~~GG~-aks~~~~Qi~ADv~-----g~pV~~~~~~e~~alGAA~lA~~a 490 (554)
T 3l0q_A 444 DTMMASGGG-TKNPIFVQEHANAT-----GCAMLLPEESEAMLLGSAMMGTVA 490 (554)
T ss_dssp CEEEEESGG-GGCHHHHHHHHHHH-----CCEEEEESCSCHHHHHHHHHHHHH
T ss_pred CEEEEeCcc-ccCHHHHHHHHHhh-----CCeEEecCCCcchHHHHHHHHHHH
Confidence 457788886 47888887777665 356766666788999999999887
No 86
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=28.91 E-value=47 Score=26.36 Aligned_cols=37 Identities=19% Similarity=0.367 Sum_probs=25.0
Q ss_pred HHHHHHHHHhhC---CCCcEEEEEcCCcchHHHHHHHHHHHHHh
Q psy13604 122 KHWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 162 (167)
Q Consensus 122 ~~~l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~aA~a~~~~ 162 (167)
++.+.+.++++. |+.++.+. |-++|+|++.-.+..+.
T Consensus 108 ~~~~~~~l~~~~~~~p~~~i~vt----GHSLGGalA~l~a~~l~ 147 (261)
T 1uwc_A 108 QDQVESLVKQQASQYPDYALTVT----GHSLGASMAALTAAQLS 147 (261)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEE----EETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCceEEEE----ecCHHHHHHHHHHHHHh
Confidence 344555555554 66777666 99999999887666554
No 87
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=28.12 E-value=91 Score=27.28 Aligned_cols=52 Identities=12% Similarity=0.019 Sum_probs=37.4
Q ss_pred CCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHH
Q psy13604 15 DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (167)
Q Consensus 15 ~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~ 72 (167)
+.+-..|-++|+.- ++|.+.+++.+.+. .+|...-..+++.+|+|++++++.
T Consensus 422 g~~~~~i~~~GGga-ks~~~~Qi~ADvlg-----~pV~~~~~~e~~alGAA~lA~~a~ 473 (515)
T 3i8b_A 422 GASITRILLIGGGA-KSEAIRTLAPSILG-----MDVTRPATDEYVAIGAARQAAWVL 473 (515)
T ss_dssp TCCCCEEEEESGGG-GCHHHHHHHHHHHT-----SCEEEECCCCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECchh-cCHHHHHHHHHHhC-----CceEecCCcccHHHHHHHHHHHHc
Confidence 43334577788765 78888887776653 466666667889999999998873
No 88
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=27.86 E-value=1e+02 Score=26.87 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=37.6
Q ss_pred CCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHH
Q psy13604 15 DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (167)
Q Consensus 15 ~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~ 71 (167)
+.+--.|-++|..- ++|.+.+++-+.+ +.+|...-..+++.+|+|+++++.
T Consensus 400 g~~~~~i~v~GGga-ks~~~~Qi~ADvl-----g~pV~~~~~~E~~alGAA~lA~~a 450 (526)
T 3ezw_A 400 GIRLHALRVDGGAV-ANNFLMQFQSDIL-----GTRVERPEVREVTALGAAYLAGLA 450 (526)
T ss_dssp CCCCSEEEEESGGG-GCHHHHHHHHHHH-----TSEEEEESCCCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECchh-hCHHHHHHHHHHH-----CCEEEeCCCCchHHHHHHHHHHHH
Confidence 44444677888864 7888877776655 357776667788999999999887
No 89
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=27.39 E-value=44 Score=29.64 Aligned_cols=48 Identities=13% Similarity=0.196 Sum_probs=37.6
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHH
Q psy13604 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (167)
Q Consensus 19 ~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~ 71 (167)
..|-++|+.-+++|.+.+++.+.+. .+|...-.++++.+|+|+++++.
T Consensus 441 ~~i~~~GGga~ks~~~~Qi~ADv~g-----~pV~~~~~~e~~alGaA~lA~~a 488 (572)
T 3jvp_A 441 HELYACGGLPQKNHLLMQIFADVTN-----REIKVAASKQTPALGAAMFASVA 488 (572)
T ss_dssp EEEEEESSHHHHCHHHHHHHHHHHT-----SCEEEBCCSSHHHHHHHHHHHHH
T ss_pred CEEEEEcCchhhCHHHHHHHHHHHC-----CeeEecCCCccHHHHHHHHHHHh
Confidence 4588889887788888888777653 46665556788999999999987
No 90
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=27.06 E-value=1.3e+02 Score=23.13 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=29.3
Q ss_pred HHHhCCCceEEEEcCcccccCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHH
Q psy13604 98 VRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 155 (167)
Q Consensus 98 l~~~~~~~~~IavDGSv~e~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~a 155 (167)
|...+.+=+.+|.+..-=.-||.|...+-+.+.+= +..+.+.-.|||+|.+++|
T Consensus 43 L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~g----~~d~GIliCGTGiG~sIaA 96 (166)
T 3s5p_A 43 ASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTSG----RADCCILVCGTGIGISIAA 96 (166)
T ss_dssp HHHTTCEEEEEEC--------CHHHHHHHHHHHTT----SCSEEEEEESSSHHHHHHH
T ss_pred HHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcC----CCcEEEEEcCCcHHHHHHh
Confidence 34444433445554322224899988888777442 3334444459999999876
No 91
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=26.36 E-value=48 Score=27.65 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=24.7
Q ss_pred HHHHHHHHHhhC---CCCcEEEEEcCCcchHHHHHHHHHHHHHh
Q psy13604 122 KHWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 162 (167)
Q Consensus 122 ~~~l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~aA~a~~~~ 162 (167)
++.+.+.++++. |+.++.+. |-++|+|++.-.+..+.
T Consensus 119 ~~~l~~~l~~~~~~~p~~~i~vt----GHSLGGAlA~L~a~~l~ 158 (319)
T 3ngm_A 119 SAAATAAVAKARKANPSFKVVSV----GHSLGGAVATLAGANLR 158 (319)
T ss_dssp HHHHHHHHHHHHHSSTTCEEEEE----EETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCceEEe----ecCHHHHHHHHHHHHHH
Confidence 344555555554 56666666 99999999877665553
No 92
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=25.61 E-value=24 Score=28.46 Aligned_cols=60 Identities=17% Similarity=0.261 Sum_probs=38.2
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCC--CCeEEEEEeccCC---cchhhH
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP--NKTFRLLLAEDGS---GKGAGL 66 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~--~~~v~~~~a~DGS---g~GaA~ 66 (167)
+.+++.++..++.+ .|-+.|++.+..+.|.+ +++.+++... ..++.+..++-|. -+|++.
T Consensus 258 a~~i~~l~~~l~p~--~IvlgG~i~~~~~~~~~-l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~ 322 (327)
T 2ap1_A 258 AVCLGNILTIVDPD--LLVIGGGLSNFTAITTQ-LAERLPRHLLPVARAPRIERARHGDAGGMRGAAF 322 (327)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGSTHHHHS-SGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--EEEEeChhhcchhHHHH-HHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHH
Confidence 45667777777654 47788999988666655 7777765542 3456777766443 335554
No 93
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=25.29 E-value=43 Score=25.64 Aligned_cols=54 Identities=17% Similarity=0.218 Sum_probs=27.1
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhcc
Q psy13604 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGA 76 (167)
Q Consensus 19 ~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg~ 76 (167)
+..=+||+|+...+.+.+...++++++... .+.+.++ ||+...-+..+...++.
T Consensus 8 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-G~~~~ia---TGR~~~~~~~~~~~l~~ 61 (279)
T 3mpo_A 8 IAIDIDGTLLNEKNELAQATIDAVQAAKAQ-GIKVVLC---TGRPLTGVQPYLDAMDI 61 (279)
T ss_dssp EEECC-----------CHHHHHHHHHHHHT-TCEEEEE---CSSCHHHHHHHHHHTTC
T ss_pred EEEcCcCCCCCCCCcCCHHHHHHHHHHHHC-CCEEEEE---cCCCHHHHHHHHHHcCC
Confidence 344579999999999999999999887632 3455555 45555555566666665
No 94
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=25.04 E-value=1.2e+02 Score=26.26 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=36.9
Q ss_pred CCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHH
Q psy13604 15 DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (167)
Q Consensus 15 ~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~ 71 (167)
+.+-..|-++|+.- ++|.+.+++.+.+ +.+|...-..+++.+|+|+++++.
T Consensus 399 g~~~~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a 449 (510)
T 2p3r_A 399 GIRLHALRVDGGAV-ANNFLMQFQSDIL-----GTRVERPEVREVTALGAAYLAGLA 449 (510)
T ss_dssp CCCCSEEEEESGGG-GCHHHHHHHHHHH-----TSEEEEESCCCHHHHHHHHHHHHH
T ss_pred CCCccEEEEeCchh-cCHHHHHHHHHHh-----CCceEecCCCCcHHHHHHHHHHHH
Confidence 33334577788764 7888888776665 346666666788999999999886
No 95
>2po1_A Probable exosome complex exonuclease 1; RNAse PH, hydrolase/hydrolase/RNA complex; 1.94A {Pyrococcus abyssi} PDB: 2po0_A* 2pnz_A 2po2_A*
Probab=25.03 E-value=1.2e+02 Score=23.77 Aligned_cols=28 Identities=21% Similarity=0.420 Sum_probs=19.6
Q ss_pred hCCCCcEEE---EEcCCcchHHHHHHHHHHH
Q psy13604 132 LVPNKTFRL---LLAEDGSGKGAGLASAIAL 159 (167)
Q Consensus 132 l~~~~~v~~---~~a~dGSg~GAAl~aA~a~ 159 (167)
++|+..|.+ ++..||+-.-|++.|+.+.
T Consensus 117 ~~p~~~i~I~~~VL~~dG~~~~aai~aa~~A 147 (249)
T 2po1_A 117 MFPRTAIDVFIEVLQADAGTRVAGITAASLA 147 (249)
T ss_dssp GSTTEEEEEEEEEEECCSCHHHHHHHHHHHH
T ss_pred HCCCCEEEEEEEEEecCCCHHHHHHHHHHHH
Confidence 345534444 6788999999998887653
No 96
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=24.20 E-value=41 Score=25.61 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=28.3
Q ss_pred EEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEec
Q psy13604 20 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAE 57 (167)
Q Consensus 20 ~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~ 57 (167)
..=+||+|......+.+...++|+++.. . +.+.++-
T Consensus 10 ~~DlDGTLl~~~~~i~~~~~~al~~l~~-~-i~v~iaT 45 (246)
T 2amy_A 10 LFDVDGTLTAPRQKITKEMDDFLQKLRQ-K-IKIGVVG 45 (246)
T ss_dssp EEESBTTTBCTTSCCCHHHHHHHHHHTT-T-SEEEEEC
T ss_pred EEECCCCcCCCCcccCHHHHHHHHHHHh-C-CeEEEEc
Confidence 3457999998777788888999998864 3 7777775
No 97
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=24.08 E-value=1.3e+02 Score=18.45 Aligned_cols=50 Identities=8% Similarity=-0.010 Sum_probs=28.7
Q ss_pred ceEEEE--cCccccc------CcchHHHHHHHHHhhC---CCCcEEEEEcCCcchHHHHHHH
Q psy13604 105 DITIAV--DGSLYKY------HPRLKHWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLAS 155 (167)
Q Consensus 105 ~~~Iav--DGSv~e~------~P~f~~~l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~a 155 (167)
.++|.| ||.+|-. .|-=.+.|...|.++. |+..|.+. ++...-.|.-+-.
T Consensus 4 ~i~v~I~~dG~~~~~~~~~~~~~v~~~~L~~~l~~~~~~~~~~~V~I~-aD~~~~y~~vv~v 64 (74)
T 2jwk_A 4 PVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEFDKDNNTLFLVG-GAKEVPYEEVIKA 64 (74)
T ss_dssp CEEEEECSSSCEEEEETTEEEEEECHHHHHHHHHHHHHHCTTCCEEEE-ECTTSCHHHHHHH
T ss_pred CEEEEEecCccEEEecCCCcCcccCHHHHHHHHHHHHhhCCCceEEEE-cCCCCCHHHHHHH
Confidence 344554 7888754 4555567777777664 56556555 4444455544433
No 98
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=23.91 E-value=1e+02 Score=23.20 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=23.3
Q ss_pred cCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHH
Q psy13604 117 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 155 (167)
Q Consensus 117 ~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~a 155 (167)
.||.|...+-+.+.+= +..+.+.-.|||+|.+++|
T Consensus 41 dYpd~a~~va~~V~~g----~~d~GIliCGTGiG~siaA 75 (149)
T 3he8_A 41 DYPDFGLKVAEAVKSG----ECDRGIVICGTGLGISIAA 75 (149)
T ss_dssp CHHHHHHHHHHHHHTT----SSSEEEEEESSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC----CCCEEEEEcCCcHHHHHHh
Confidence 4777777777766432 2333444459999999876
No 99
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=23.01 E-value=1.1e+02 Score=23.22 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=23.2
Q ss_pred cCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHH
Q psy13604 117 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 155 (167)
Q Consensus 117 ~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~a 155 (167)
.||.|...+-+.+.+= +..+.+.=.|||+|.+++|
T Consensus 53 dYpd~a~~va~~V~~g----~~d~GIliCGTGiG~siaA 87 (155)
T 1o1x_A 53 DYPDYAKKVVQSILSN----EADFGILLCGTGLGMSIAA 87 (155)
T ss_dssp CHHHHHHHHHHHHHTT----SCSEEEEEESSSHHHHHHH
T ss_pred ChHHHHHHHHHHHHcC----CCceEEEEcCCcHHHHHHh
Confidence 5777777776666332 3344444569999999875
No 100
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=22.99 E-value=64 Score=24.46 Aligned_cols=58 Identities=12% Similarity=0.233 Sum_probs=37.8
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhcccc
Q psy13604 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGAFH 78 (167)
Q Consensus 19 ~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg~~~ 78 (167)
+.+=+||+|+.....+. ...++|+++.. ..+.+.++-.-|++...-+......+|.+.
T Consensus 9 i~~DlDGTLl~~~~~~~-~~~~ai~~l~~-~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 9 YLIDLDGTMYNGTEKIE-EACEFVRTLKD-RGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp EEEECSSSTTCHHHHHH-HHHHHHHHHHH-TTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred EEEeCcCceEeCCEeCc-cHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44557999997633333 35666666652 345556666668888777777778888753
No 101
>3ejx_A DAP epimerase, diaminopimelate epimerase, chloroplastic; PLP-independenet amino acid racemase, aziridino-diaminopimelate, isomerase; HET: ZDP; 1.95A {Arabidopsis thaliana} PDB: 3ekm_A*
Probab=22.92 E-value=4.1 Score=34.53 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=13.1
Q ss_pred EeccCC-----cchhhHHHHHHHH-hcc
Q psy13604 55 LAEDGS-----GKGAGLASAIALK-LGA 76 (167)
Q Consensus 55 ~a~DGS-----g~GaA~~aav~~~-lg~ 76 (167)
...||| |-|.+..+..+.. .|.
T Consensus 89 FN~DGSEaemCGNGtRc~A~~l~~~~g~ 116 (317)
T 3ejx_A 89 FNSDGSEPEMCGNGVRCFARFIAELENL 116 (317)
T ss_dssp EETTSCCCSCCHHHHHHHHHHHHHHTTC
T ss_pred EcCCCCeeccCccHHHHHHHHHHHhcCC
Confidence 356775 4477776666655 444
No 102
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=22.90 E-value=51 Score=24.99 Aligned_cols=57 Identities=19% Similarity=0.232 Sum_probs=36.7
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhccc
Q psy13604 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGAF 77 (167)
Q Consensus 19 ~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg~~ 77 (167)
+..=+||+++..++-+ ....++++.+.. ..+.+.++...+|+...-.......+|.+
T Consensus 20 v~~DlDGTLl~~~~~~-~~~~~~l~~l~~-~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 20 FILDMDGTFYLDDSLL-PGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp EEECCBTTTEETTEEC-TTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred EEEcCcCcEEeCCEEC-cCHHHHHHHHHH-cCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 4455699999875544 334556655542 24556677777888777666667777774
No 103
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=22.44 E-value=1.5e+02 Score=25.60 Aligned_cols=51 Identities=20% Similarity=0.213 Sum_probs=36.5
Q ss_pred CCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHH
Q psy13604 15 DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (167)
Q Consensus 15 ~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~ 71 (167)
+.+--.|-++|..- ++|.+.+++.+.+ +.+|...-..+++.+|+|+++++.
T Consensus 401 g~~~~~i~~~GG~a-~s~~~~Qi~Adv~-----g~pV~~~~~~e~~alGaA~lA~~~ 451 (504)
T 2d4w_A 401 GVDLTELRVDGGMV-ANELLMQFQADQL-----GVDVVRPKVAETTALGAAYAAGIA 451 (504)
T ss_dssp SCCCCEEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHH
T ss_pred CCCcceEEEeCCcc-cCHHHHHHHHHHh-----CCeEEeCCCCcchHHHHHHHHHhh
Confidence 43334577888776 7788877776655 346666656788999999999887
No 104
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=22.43 E-value=44 Score=23.54 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=21.9
Q ss_pred EEEEcCcccccCcchHHHHHHHHHhh
Q psy13604 107 TIAVDGSLYKYHPRLKHWLQKYIQLL 132 (167)
Q Consensus 107 ~IavDGSv~e~~P~f~~~l~~~l~~l 132 (167)
..=+||+++...+.+.+..++.++++
T Consensus 5 ~fDlDGTL~~~~~~~~~~~~~~~~~~ 30 (216)
T 2pib_A 5 IFDMDGVLMDTEPLYFEAYRRVAESY 30 (216)
T ss_dssp EEESBTTTBCCGGGHHHHHHHHHHHT
T ss_pred EECCCCCCCCchHHHHHHHHHHHHHc
Confidence 34579999999999999988888776
No 105
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=22.42 E-value=1.3e+02 Score=24.23 Aligned_cols=50 Identities=10% Similarity=0.202 Sum_probs=33.3
Q ss_pred hhHHHHHHhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhC-C-CCeEEEEEecc
Q psy13604 4 FSGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-P-NKTFRLLLAED 58 (167)
Q Consensus 4 aa~iaail~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~-~-~~~v~~~~a~D 58 (167)
+.+++.++..++.+ .|-+.|++. |.|.+.+++.+++.. + ..++.+..++.
T Consensus 273 a~~i~~l~~~l~P~--~IvlgG~i~---~~~~~~l~~~l~~~~~~~~~~~~i~~s~~ 324 (343)
T 2yhw_A 273 GLGVVNILHTMNPS--LVILSGVLA---SHYIHIVKDVIRQQALSSVQDVDVVVSDL 324 (343)
T ss_dssp HHHHHHHHHHTCCS--EEEEESTTH---HHHHHHHHHHHHHHSCGGGTTCEEEECCC
T ss_pred HHHHHHHHHHhCCC--EEEEeCCcH---HHHHHHHHHHHHHhcccccCCcEEEEccC
Confidence 45666777777644 466889996 578888888887654 2 23456666654
No 106
>1uhm_A Histone H1, histone HHO1P; winged helix-turn-helix, linker histone, riken structural genomics/proteomics initiative, RSGI; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13
Probab=22.26 E-value=48 Score=21.83 Aligned_cols=17 Identities=6% Similarity=0.032 Sum_probs=15.2
Q ss_pred cCcchHHHHHHHHHHhC
Q psy13604 30 YHPRLKHWLQKYIQLLV 46 (167)
Q Consensus 30 ~~p~f~~~l~~~l~~l~ 46 (167)
-||.|.+|+.+++..|-
T Consensus 3 ~hP~y~~MI~eAI~~lk 19 (78)
T 1uhm_A 3 SSKSYRELIIEGLTALK 19 (78)
T ss_dssp CCCCHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhc
Confidence 48999999999998876
No 107
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=22.24 E-value=1.1e+02 Score=23.03 Aligned_cols=35 Identities=14% Similarity=0.035 Sum_probs=23.1
Q ss_pred cCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHH
Q psy13604 117 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 155 (167)
Q Consensus 117 ~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~a 155 (167)
.||.|...+-+.+.+= +..+.+.-.|||+|.+++|
T Consensus 42 dYpd~a~~va~~V~~g----~~d~GIliCGTGiG~siaA 76 (149)
T 2vvr_A 42 DYPHYASQVALAVAGG----EVDGGILICGTGVGISIAA 76 (149)
T ss_dssp CHHHHHHHHHHHHHTT----SSSEEEEEESSSHHHHHHH
T ss_pred ChHHHHHHHHHHHHcC----CCceEEEEeCCcHHHHHHH
Confidence 5777777776665332 3334444459999999876
No 108
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=22.22 E-value=98 Score=23.79 Aligned_cols=54 Identities=9% Similarity=0.066 Sum_probs=28.1
Q ss_pred HhHhCCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHH
Q psy13604 11 VRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (167)
Q Consensus 11 l~~~~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~a 68 (167)
|+..+.+=..+|.+..-=.-||.|...+-+++.. .+..+.+-=.|||+|.++++
T Consensus 43 L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~----g~~d~GIliCGTGiG~sIaA 96 (166)
T 3s5p_A 43 ASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTS----GRADCCILVCGTGIGISIAA 96 (166)
T ss_dssp HHHTTCEEEEEEC--------CHHHHHHHHHHHT----TSCSEEEEEESSSHHHHHHH
T ss_pred HHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHc----CCCcEEEEEcCCcHHHHHHh
Confidence 3444433334555432112478887777766543 33445566679999998754
No 109
>1rre_A ATP-dependent protease LA; catalytic Ser-Lys DYAD, hydrolase; HET: MSE; 1.75A {Escherichia coli} SCOP: d.14.1.10 PDB: 1rr9_A*
Probab=22.19 E-value=97 Score=23.93 Aligned_cols=30 Identities=17% Similarity=0.367 Sum_probs=23.4
Q ss_pred CCCCcEEEEEc-----CCcchHHHHHHHHHHHHHh
Q psy13604 133 VPNKTFRLLLA-----EDGSGKGAGLASAIALKLG 162 (167)
Q Consensus 133 ~~~~~v~~~~a-----~dGSg~GAAl~aA~a~~~~ 162 (167)
+|+.+|++.++ +||++.|.|++.|+.....
T Consensus 75 ~~~~di~vnl~~g~~~k~GpsadLaia~AilSa~~ 109 (200)
T 1rre_A 75 YEKRDIHVHVPEGATPKDGPAAGIAMCTALVSCLT 109 (200)
T ss_dssp TTSEEEEEECSSTTSCEESSTTHHHHHHHHHHHHH
T ss_pred CCcceEEEEeCCccccCCCCcchHHHHHHHHHHcC
Confidence 34567888776 5999999999999877654
No 110
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=21.92 E-value=62 Score=24.84 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=38.5
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhccc
Q psy13604 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGAF 77 (167)
Q Consensus 19 ~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg~~ 77 (167)
+..=+||+++...+...+...++|+++... .+.+.++ ||+...-+..+...++.+
T Consensus 9 i~fDlDGTLl~~~~~i~~~~~~al~~l~~~-G~~~~ia---TGR~~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 9 LALNIDGALLRSNGKIHQATKDAIEYVKKK-GIYVTLV---TNRHFRSAQKIAKSLKLD 63 (290)
T ss_dssp EEECCCCCCSCTTSCCCHHHHHHHHHHHHT-TCEEEEB---CSSCHHHHHHHHHHTTCC
T ss_pred EEEcCCCCCCCCCCccCHHHHHHHHHHHHC-CCEEEEE---CCCChHHHHHHHHHcCCC
Confidence 344579999999999999999999888632 3555655 455444445666677765
No 111
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=21.72 E-value=1.1e+02 Score=26.61 Aligned_cols=47 Identities=9% Similarity=0.099 Sum_probs=35.2
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHH
Q psy13604 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (167)
Q Consensus 19 ~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~ 71 (167)
-.|-++|..- ++|.+.+++.+.+. .+|...-..+++..|+|+++++.
T Consensus 395 ~~i~~~GGga-~s~~~~Qi~ADv~g-----~pV~~~~~~e~~alGaA~lA~~a 441 (504)
T 3ll3_A 395 VAINATGGFL-KSDFVRQLCANIFN-----VPIVTMKEQQSGTLAAMFLARQA 441 (504)
T ss_dssp SEEEEESGGG-CSHHHHHHHHHHHT-----SCEEEESCSCHHHHHHHHHHHHH
T ss_pred CEEEEeCchh-cCHHHHHHHHHhhC-----CeEEecCCCCchhHHHHHHHHHH
Confidence 4577788765 78888877776652 46666556788999999999886
No 112
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=21.61 E-value=1.2e+02 Score=23.41 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=22.8
Q ss_pred cCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHH
Q psy13604 117 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 155 (167)
Q Consensus 117 ~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~a 155 (167)
-||.|...+-+.+.+= +..+.+.-.|||+|.+++|
T Consensus 61 dYpd~a~~va~~V~~g----~~d~GIliCGTGiG~sIaA 95 (169)
T 3ph3_A 61 DYPDFGLKVAEAVKSG----ECDRGIVICGTGLGISIAA 95 (169)
T ss_dssp CHHHHHHHHHHHHHTT----SSSEEEEEESSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC----CCCEEEEEcCCcHHHHHHh
Confidence 4777777776666432 2334444459999999875
No 113
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=21.08 E-value=96 Score=23.95 Aligned_cols=55 Identities=20% Similarity=0.287 Sum_probs=39.1
Q ss_pred eEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhccc
Q psy13604 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGAF 77 (167)
Q Consensus 19 ~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg~~ 77 (167)
+..=+||+|+...+...+...++|+++... .+.+.++ ||+...-+..+...++.+
T Consensus 24 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~-G~~v~ia---TGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 24 VASDLDGTLLSPDHFLTPYAKETLKLLTAR-GINFVFA---TGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp EEEECCCCCSCTTSCCCHHHHHHHHHHHTT-TCEEEEE---CSSCGGGGHHHHHHHCSC
T ss_pred EEEeCcCCCCCCCCcCCHHHHHHHHHHHHC-CCEEEEE---cCCCHHHHHHHHHhcCCC
Confidence 455679999999999999999999988632 4566665 455444445566667664
No 114
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=21.03 E-value=72 Score=24.96 Aligned_cols=35 Identities=17% Similarity=0.156 Sum_probs=23.6
Q ss_pred cCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHH
Q psy13604 117 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 155 (167)
Q Consensus 117 ~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~a 155 (167)
.||.|...+-+.+.+= +..+.+.-.|||+|.+++|
T Consensus 73 DYPd~a~~vA~~V~~g----e~d~GIliCGTGiG~sIaA 107 (184)
T 3sgw_A 73 AYPHVAIQAAQLIKDG----KVDRALMICGTGLGVAISA 107 (184)
T ss_dssp CHHHHHHHHHHHHHTT----SCSEEEEEESSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC----CCcEEEEEcCCcHHHhhhh
Confidence 5788877777766432 3334444459999999876
No 115
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=21.00 E-value=1.1e+02 Score=23.27 Aligned_cols=35 Identities=20% Similarity=0.075 Sum_probs=23.3
Q ss_pred cCcchHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHH
Q psy13604 117 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 155 (167)
Q Consensus 117 ~~P~f~~~l~~~l~~l~~~~~v~~~~a~dGSg~GAAl~a 155 (167)
.||.|...+-+.+.+= +..+.+.=.|||+|.+++|
T Consensus 45 dYpd~a~~va~~V~~g----~~d~GIliCGTGiG~siaA 79 (162)
T 2vvp_A 45 DYPAFCIAAATRTVAD----PGSLGIVLGGSGNGEQIAA 79 (162)
T ss_dssp CHHHHHHHHHHHHHHS----TTCEEEEEESSSHHHHHHH
T ss_pred ChHHHHHHHHHHHHcC----CCceEEEEeCCcHHHHHHH
Confidence 5777777777766432 2334444459999999876
No 116
>1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A
Probab=20.95 E-value=71 Score=25.22 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=22.7
Q ss_pred HHHHHHHHhhC---CCCcEEEEEcCCcchHHHHHHHHHHHHH
Q psy13604 123 HWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKL 161 (167)
Q Consensus 123 ~~l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~aA~a~~~ 161 (167)
+.+.+.++++. |+.++.+. |-++|+|++.-++..+
T Consensus 120 ~~~~~~l~~~~~~~p~~~i~~~----GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 120 NELVATVLDQFKQYPSYKVAVT----GHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHCCCceEEEE----eeCHHHHHHHHHHHHH
Confidence 33444444443 55556555 9999999988777666
No 117
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=20.55 E-value=84 Score=24.89 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhC---CCCcEEEEEcCCcchHHHHHHHHHHHHHh
Q psy13604 122 KHWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 162 (167)
Q Consensus 122 ~~~l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~aA~a~~~~ 162 (167)
.+.+.+.++++. |+.++.+. |-++|+|++.-.+..+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~l~----GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 121 ADTLRQKVEDAVREHPDYRVVFT----GHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEE----EETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCceEEEe----cCChHHHHHHHHHHHHH
Confidence 344455555543 66677666 99999999887776654
No 118
>1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A
Probab=20.20 E-value=71 Score=25.37 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=24.1
Q ss_pred HHHHHHHHHhhC---CCCcEEEEEcCCcchHHHHHHHHHHHHH
Q psy13604 122 KHWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKL 161 (167)
Q Consensus 122 ~~~l~~~l~~l~---~~~~v~~~~a~dGSg~GAAl~aA~a~~~ 161 (167)
.+.+.+.++++. |+.++.+. |-++|+|++.-.+..+
T Consensus 120 ~~~~~~~l~~~~~~~~~~~i~vt----GHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 120 VNDYFPVVQEQLTAHPTYKVIVT----GHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEE----EETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCeEEEe----ccChHHHHHHHHHHHH
Confidence 344445555553 66666666 9999999988766655
No 119
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=20.14 E-value=1.9e+02 Score=24.60 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=38.8
Q ss_pred HHHHHhHh---CCCCeEEEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccC-CcchhhHHHHHH
Q psy13604 7 TAVLVRRI---DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDG-SGKGAGLASAIA 71 (167)
Q Consensus 7 iaail~~~---~~~~~~iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DG-Sg~GaA~~aav~ 71 (167)
+.-+++.+ +.+--.|-++|..- ++|.+.+++.+.+ +.+|.....++. +.+|+|+++++.
T Consensus 373 ~~~~~~~l~~~g~~~~~i~~~GG~a-~s~~~~Qi~Adv~-----g~pV~~~~~~e~~~alGAA~lA~~~ 435 (484)
T 2itm_A 373 LADGMDVVHACGIKPQSVTLIGGGA-RSEYWRQMLADIS-----GQQLDYRTGGDVGPALGAARLAQIA 435 (484)
T ss_dssp HHHHHHHHHTTTCCCSCEEEESGGG-CCHHHHHHHHHHH-----CCCEEEESCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcceEEEEeccc-cCHHHHHHHHHHh-----CCeEEeCCCCCcccHHHHHHHHHHH
Confidence 34455555 22223467778775 7777777776655 356766666674 789999998886
No 120
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=20.11 E-value=45 Score=25.31 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=32.9
Q ss_pred EEEcCcccccCcchHHHHHHHHHHhCCCCeEEEEEeccCCcchhhHHHHHHHHhcc
Q psy13604 21 IAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKLGA 76 (167)
Q Consensus 21 iavDGSv~e~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GaA~~aav~~~lg~ 76 (167)
.=+||+++...+...+...++++++.. ..+.+.++ ||+....+..+...++.
T Consensus 8 ~DlDGTLl~~~~~i~~~~~~al~~l~~-~G~~~~~a---TGR~~~~~~~~~~~l~~ 59 (258)
T 2pq0_A 8 FDIDGTLLDEQKQLPLSTIEAVRRLKQ-SGVYVAIA---TGRAPFMFEHVRKQLGI 59 (258)
T ss_dssp ECTBTTTBCTTSCCCHHHHHHHHHHHH-TTCEEEEE---CSSCGGGSHHHHHHHTC
T ss_pred EeCCCCCcCCCCccCHHHHHHHHHHHH-CCCEEEEE---CCCChHHHHHHHHhcCC
Confidence 347999999888888888888887752 23445555 34433333344455554
Done!