BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13607
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P21872|PUR2_CHICK Trifunctional purine biosynthetic protein adenosine-3 OS=Gallus
gallus GN=GART PE=2 SV=1
Length = 1003
Score = 144 bits (362), Expect = 8e-34, Method: Composition-based stats.
Identities = 67/108 (62%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L G FV +W GK++NIHP+LLP FKG +AH+ L+AGVRVTGCTVHFV E VDAGAII
Sbjct: 894 ILSGPFVKKWEGKILNIHPSLLPSFKGANAHKLVLEAGVRVTGCTVHFVAEEVDAGAIIF 953
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKLDLDSGKL 238
QE+VP+ DT E+LSERVK AEH+A+P AL+LVA+ V++ ++GK+
Sbjct: 954 QEAVPVKIGDTVETLSERVKEAEHRAFPAALQLVASGAVQVG-EAGKI 1000
>sp|Q59A32|PUR2_BOVIN Trifunctional purine biosynthetic protein adenosine-3 OS=Bos taurus
GN=GART PE=2 SV=1
Length = 1010
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 79/101 (78%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L G FV +W GK++NIHP+LLP FKG +AH Q LDAGV VTGCTVHFV E VDAG II
Sbjct: 898 ILSGPFVRKWNGKMLNIHPSLLPSFKGSNAHEQVLDAGVTVTGCTVHFVAEDVDAGQIIL 957
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKL 231
QE+VP+ DT E+LSERVK AEHK +P AL+LVA+ V+L
Sbjct: 958 QEAVPVKRGDTVETLSERVKLAEHKIFPSALQLVASGAVRL 998
>sp|P22102|PUR2_HUMAN Trifunctional purine biosynthetic protein adenosine-3 OS=Homo sapiens
GN=GART PE=1 SV=1
Length = 1010
Score = 138 bits (348), Expect = 3e-32, Method: Composition-based stats.
Identities = 66/108 (61%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L G FV +W GK++NIHP+LLP FKG +AH QAL+ GV VTGCTVHFV E VDAG II
Sbjct: 898 ILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIIL 957
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKLDLDSGKL 238
QE+VP+ DT +LSERVK AEHK +P AL+LVA+ V+L ++GK+
Sbjct: 958 QEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLG-ENGKI 1004
>sp|Q64737|PUR2_MOUSE Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus
GN=Gart PE=2 SV=3
Length = 1010
Score = 137 bits (346), Expect = 5e-32, Method: Composition-based stats.
Identities = 66/108 (61%), Positives = 82/108 (75%), Gaps = 1/108 (0%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L G FV +W GK++NIHP+LLP FKG +AH Q L+AGV +TGCTVHFV E VDAG II
Sbjct: 898 ILSGPFVRKWDGKMLNIHPSLLPSFKGSNAHEQVLEAGVTITGCTVHFVAEDVDAGQIIL 957
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKLDLDSGKL 238
QE+VP+ DT +LSERVK AEHK +P AL+LVA+ V+L D GK+
Sbjct: 958 QEAVPVRRGDTVATLSERVKVAEHKIFPAALQLVASGAVQLRED-GKI 1004
>sp|Q26255|PUR2_CHITE Trifunctional purine biosynthetic protein adenosine-3 OS=Chironomus
tentans GN=GART PE=3 SV=1
Length = 1371
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 97/144 (67%), Gaps = 11/144 (7%)
Query: 99 NRPDIVVHDKERRMALLVDIAIPN---THNMESTVVLCGE-------FVNRWRGKLINIH 148
N P V+ +K+ D+A+ N HN+E + L G FVN+W+GKL+NIH
Sbjct: 1221 NIPSTVISNKDYATREAFDVALHNELIKHNVE-IICLAGFMRILTPCFVNKWKGKLLNIH 1279
Query: 149 PALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEESLSER 208
P+LLP +KG+ A + AL++G +GCTVHFV+E+VD GAII QE VPI+ DT ESL+ER
Sbjct: 1280 PSLLPKYKGITAQKDALESGDNESGCTVHFVDENVDTGAIIVQEIVPIFENDTVESLTER 1339
Query: 209 VKSAEHKAYPRALELVATERVKLD 232
+ AEH A+P+AL LVA+ V+L+
Sbjct: 1340 IHVAEHIAFPKALRLVASGYVRLN 1363
>sp|P00967|PUR2_DROME Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
melanogaster GN=ade3 PE=1 SV=2
Length = 1353
Score = 128 bits (322), Expect = 3e-29, Method: Composition-based stats.
Identities = 54/94 (57%), Positives = 72/94 (76%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
VL FV WRG+L+NIHP+LLP + G+H +QAL+AG + +GCTVHFV+E VD GAII
Sbjct: 1246 VLSAPFVREWRGRLVNIHPSLLPKYPGLHVQKQALEAGEKESGCTVHFVDEGVDTGAIIV 1305
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELV 224
Q +VPI P D E+SL++R+ AEH A+PRAL ++
Sbjct: 1306 QAAVPILPDDDEDSLTQRIHKAEHWAFPRALAML 1339
>sp|P16340|PUR2_DROPS Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
pseudoobscura pseudoobscura GN=ade3 PE=3 SV=2
Length = 1364
Score = 121 bits (303), Expect = 5e-27, Method: Composition-based stats.
Identities = 52/89 (58%), Positives = 67/89 (75%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L FV WRG+LINIHP+LLP F G+H +QAL+AG +GCTVH+V+E VD GAII
Sbjct: 1248 ILSVPFVREWRGRLINIHPSLLPKFPGLHVQKQALEAGETESGCTVHYVDEGVDTGAIIV 1307
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPR 219
Q +VPI P D EE+L++R+ AEH A+PR
Sbjct: 1308 QAAVPILPGDDEETLTQRIHYAEHWAFPR 1336
>sp|P08179|PUR3_ECOLI Phosphoribosylglycinamide formyltransferase OS=Escherichia coli
(strain K12) GN=purN PE=1 SV=1
Length = 212
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 70/109 (64%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L FV+ + G+L+NIHP+LLP + G+H HRQAL+ G G +VHFV + +D G +I
Sbjct: 91 ILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVIL 150
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKLDLDSGKLD 239
Q VP++ D+E+ ++ RV++ EH YP + A R+K+ ++ LD
Sbjct: 151 QAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLD 199
>sp|P43846|PUR3_HAEIN Phosphoribosylglycinamide formyltransferase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=purN PE=3 SV=1
Length = 212
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 69/109 (63%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L +F R+ GK++NIHP+LLP + G++ +++A++AG G TVHFV E VD GAI+
Sbjct: 92 ILTPKFTQRFAGKILNIHPSLLPKYAGLNTYQRAIEAGDNEHGTTVHFVNEEVDGGAIVL 151
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKLDLDSGKLD 239
Q VPI+P D+ E + R + E++ YP ++ R++L + LD
Sbjct: 152 QAKVPIFPEDSIEEVEARTREQEYQIYPLVIKWFTEGRLRLKDNLAYLD 200
>sp|Q8CT28|PUR3_STAES Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=purN PE=3 SV=1
Length = 188
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 130 VVLCG-------EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEES 182
+VL G + + + G+++NIHP+LLP FKG+ A QAL++G VTG TVH+V+
Sbjct: 85 IVLAGYMRLVGQDLLQAYEGRILNIHPSLLPKFKGLDAIGQALESGDTVTGSTVHYVDSG 144
Query: 183 VDAGAIICQESVPIYPRDTEESLSERVKSAEHKAYPRAL 221
+D G II Q+ I P DT+E L +RVK E++ YPR +
Sbjct: 145 MDTGEIIEQQQCDIKPDDTKEQLEDRVKHLEYELYPRVI 183
>sp|Q5HQ98|PUR3_STAEQ Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=purN PE=3
SV=1
Length = 188
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 130 VVLCG-------EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEES 182
+VL G + + + G+++NIHP+LLP FKG+ A QAL++G VTG TVH+V+
Sbjct: 85 IVLAGYMRLVGQDLLQAYEGRILNIHPSLLPKFKGLDAIGQALESGDTVTGSTVHYVDSG 144
Query: 183 VDAGAIICQESVPIYPRDTEESLSERVKSAEHKAYPRAL 221
+D G II Q+ I P DT+E L +RVK E++ YPR +
Sbjct: 145 MDTGEIIEQQQCDIKPDDTKEQLEDRVKHLEYELYPRVI 183
>sp|P12040|PUR3_BACSU Phosphoribosylglycinamide formyltransferase OS=Bacillus subtilis
(strain 168) GN=purN PE=3 SV=2
Length = 195
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%)
Query: 136 FVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVP 195
+ + GK+INIHP+LLP F G+ A QA AGV+V G TVH+V+E +D G II Q+++
Sbjct: 97 LLQAYGGKIINIHPSLLPAFPGIDAVGQAFRAGVKVAGITVHYVDEGMDTGPIIAQKAIE 156
Query: 196 IYPRDTEESLSERVKSAEHKAYPRALE 222
I DT E++ +R+ EHK YP ++
Sbjct: 157 IDEHDTLETIEQRIHKLEHKWYPSVIK 183
>sp|P71554|PUR3_MYCTU Phosphoribosylglycinamide formyltransferase OS=Mycobacterium
tuberculosis GN=purN PE=1 SV=2
Length = 215
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 54/85 (63%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L +F++R+ G+ +N HPALLP F G H AL GV+VTG TVH V+ D G I+
Sbjct: 101 ILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILA 160
Query: 191 QESVPIYPRDTEESLSERVKSAEHK 215
Q+ VP+ D EE+L ER+K E +
Sbjct: 161 QQPVPVLDGDDEETLHERIKVTERR 185
>sp|Q5HH12|PUR3_STAAC Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain COL) GN=purN PE=3 SV=1
Length = 188
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 135 EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESV 194
+ + + GK++NIHP+LLP +KG+ A QA +G +TG TVH+V+ +D G II Q
Sbjct: 97 DLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKC 156
Query: 195 PIYPRDTEESLSERVKSAEHKAYPRAL 221
I P D++E L E+VK E++ YP +
Sbjct: 157 DIRPDDSKEQLEEKVKKLEYELYPSVI 183
>sp|Q6GI12|PUR3_STAAR Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MRSA252) GN=purN PE=3 SV=1
Length = 188
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 135 EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESV 194
+ + + GK++NIHP+LLP +KG+ A QA +G +TG TVH+V+ +D G II Q
Sbjct: 97 DLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRQC 156
Query: 195 PIYPRDTEESLSERVKSAEHKAYPRAL 221
I P D++E L E+VK E++ YP +
Sbjct: 157 DIRPDDSKEQLEEKVKKLEYELYPSVI 183
>sp|P99162|PUR3_STAAN Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain N315) GN=purN PE=1 SV=1
Length = 188
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 135 EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESV 194
+ + + GK++NIHP+LLP +KG+ A QA +G +TG TVH+V+ +D G II Q
Sbjct: 97 DLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQC 156
Query: 195 PIYPRDTEESLSERVKSAEHKAYPRAL 221
I P D++E L E+VK E++ YP +
Sbjct: 157 DIRPDDSKEQLEEKVKKLEYELYPSVI 183
>sp|P65897|PUR3_STAAM Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=purN PE=1 SV=1
Length = 188
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 135 EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESV 194
+ + + GK++NIHP+LLP +KG+ A QA +G +TG TVH+V+ +D G II Q
Sbjct: 97 DLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQC 156
Query: 195 PIYPRDTEESLSERVKSAEHKAYPRAL 221
I P D++E L E+VK E++ YP +
Sbjct: 157 DIRPDDSKEQLEEKVKKLEYELYPSVI 183
>sp|Q8NX89|PUR3_STAAW Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MW2) GN=purN PE=3 SV=1
Length = 188
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 135 EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESV 194
+ + + GK++NIHP+LLP +KG+ A QA +G +TG TVH+V+ +D G II Q
Sbjct: 97 DLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQC 156
Query: 195 PIYPRDTEESLSERVKSAEHKAYPRAL 221
I P D++E L E+VK E++ YP +
Sbjct: 157 DIRPDDSKEQLEEKVKKLEYELYPSVI 183
>sp|Q6GAE1|PUR3_STAAS Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MSSA476) GN=purN PE=3 SV=1
Length = 188
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 135 EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESV 194
+ + + GK++NIHP+LLP +KG+ A QA +G +TG TVH+V+ +D G II Q
Sbjct: 97 DLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQC 156
Query: 195 PIYPRDTEESLSERVKSAEHKAYPRAL 221
I P D++E L E+VK E++ YP +
Sbjct: 157 DIRPDDSKEQLEEKVKKLEYELYPSVI 183
>sp|P52422|PUR3_ARATH Phosphoribosylglycinamide formyltransferase, chloroplastic
OS=Arabidopsis thaliana GN=PUR3 PE=2 SV=2
Length = 292
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 135 EFVNRWRGKLINIHPALLPLFKG-----MHAHRQALDAGVRVTGCTVHFVEESVDAGAII 189
E V + +++NIHPALLP F G + H+ L++G R +G T+HFV E D G I+
Sbjct: 173 ELVQAFPKRILNIHPALLPAFGGKGLYGIKVHKAVLESGARYSGPTIHFVNEEYDTGRIL 232
Query: 190 CQESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKLDLDS 235
Q +V + DT E L++RV EHK Y + + ER+K D
Sbjct: 233 AQSAVRVIANDTPEELAKRVLHEEHKLYVEVVGAICEERIKWREDG 278
>sp|P52423|PUR3_VIGUN Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Vigna
unguiculata GN=PUR3 PE=2 SV=2
Length = 312
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 135 EFVNRWRGKLINIHPALLPLFKG-----MHAHRQALDAGVRVTGCTVHFVEESVDAGAII 189
E + + + NIHP+LLP F G M H+ + +G R +G T+HFV+E D G I+
Sbjct: 193 ELIRAFERSIFNIHPSLLPAFGGKGYYGMKVHKAVIASGARFSGPTIHFVDEHYDTGRIL 252
Query: 190 CQESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERV 229
Q VP+ DT E L+ RV + EH+ Y +E + ER+
Sbjct: 253 AQRVVPVLANDTAEELAARVLNEEHQLYVEVVEALCEERI 292
>sp|P0A441|PURU_SHIFL Formyltetrahydrofolate deformylase OS=Shigella flexneri GN=purU
PE=3 SV=1
Length = 280
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
VL EFV R+ K+INIH + LP F G + QA + GV++ G T H+V +++D G II
Sbjct: 172 VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIM 231
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERV 229
Q+ + + T E + + E RAL V +RV
Sbjct: 232 QDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRV 270
>sp|P37051|PURU_ECOLI Formyltetrahydrofolate deformylase OS=Escherichia coli (strain K12)
GN=purU PE=1 SV=1
Length = 280
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
VL EFV R+ K+INIH + LP F G + QA + GV++ G T H+V +++D G II
Sbjct: 172 VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIM 231
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERV 229
Q+ + + T E + + E RAL V +RV
Sbjct: 232 QDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRV 270
>sp|P0A440|PURU_ECOL6 Formyltetrahydrofolate deformylase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=purU PE=3 SV=1
Length = 280
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
VL EFV R+ K+INIH + LP F G + QA + GV++ G T H+V +++D G II
Sbjct: 172 VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIM 231
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERV 229
Q+ + + T E + + E RAL V +RV
Sbjct: 232 QDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRV 270
>sp|Q03432|PURU_HAEIN Formyltetrahydrofolate deformylase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purU PE=3
SV=2
Length = 278
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
VL EFV R+ ++INIH + LP F G ++QA GV++ G T HF+ +D G II
Sbjct: 170 VLNPEFVARYPNRVINIHHSFLPAFIGAKPYQQAYKRGVKIIGATAHFINNELDQGPIIM 229
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERV 229
Q + + E++ + E RAL+L +R+
Sbjct: 230 QNVINVDHTYNAEAMMRAGRDVEKTVLSRALDLALHDRI 268
>sp|Q54I60|PUR3_DICDI Phosphoribosylglycinamide formyltransferase OS=Dictyostelium
discoideum GN=purN PE=3 SV=1
Length = 206
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 144 LINIHPALLPLFKGMHAHRQAL----DAGVRVTGCTVHFVEESVDAGAIICQESVPIYPR 199
+IN+HPAL + G HA +A + ++ +G +H V E VDAG +I + +PI P
Sbjct: 119 IINLHPALPGQYPGAHAIERAFNDFKENKIKHSGIMIHKVIEEVDAGEVILTKEIPILPT 178
Query: 200 DTEESLSERVKSAEHKAYPRALELVATE 227
DT ESL ER EHK+ +++L++T+
Sbjct: 179 DTLESLEERFHQQEHKSLVESIKLLSTK 206
>sp|Q5PBC7|FMT_ANAMM Methionyl-tRNA formyltransferase OS=Anaplasma marginale (strain St.
Maries) GN=fmt PE=3 SV=1
Length = 301
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 134 GEFVNRW-----RGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAI 188
G + RW R IN+HP+LLP ++G + A+ +G VTG T+ + E +DAG I
Sbjct: 88 GMILPRWMLEVPRFGCINVHPSLLPRWRGAAPMQHAILSGDAVTGVTIMQLNERLDAGDI 147
Query: 189 ICQESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKLDLDSG 236
QES PI R+ +LSER+ S + + L+ + T R D+G
Sbjct: 148 FLQESTPIGSRENIVALSERLSSMGGRMLLKVLDNLDTMRSVSQDDAG 195
>sp|Q42805|PUR3_SOYBN Phosphoribosylglycinamide formyltransferase, chloroplastic
OS=Glycine max GN=PUR3 PE=2 SV=1
Length = 295
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 157 GMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEESLSERVKSAEHKA 216
GM H+ + +G R +G T+HFV+E D G I+ Q VP+ DT E L+ RV EH+
Sbjct: 203 GMKVHKAVIASGARFSGPTIHFVDEHYDTGRILAQRVVPVQANDTVEELAARVLKEEHQL 262
Query: 217 YPRALELVATERVKLDLDS 235
Y +E + ERV D
Sbjct: 263 YVEVVEALCEERVVWRQDG 281
>sp|Q8RDM3|FMT_FUSNN Methionyl-tRNA formyltransferase OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=fmt PE=3 SV=2
Length = 310
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L E ++ + +IN+H +LLP F+G A+ G +G ++ +VEE +DAG +I
Sbjct: 89 ILPKEVIDIPKYGVINLHSSLLPRFRGAAPINAAIINGDTKSGISIMYVEEELDAGDVIL 148
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKLDLDSGKL 238
QE I DT SL +R+K +A+EL+ VK KL
Sbjct: 149 QEETEISDEDTFLSLHDRLKDMGADLLLKAIELIKKGEVKAQKQDKKL 196
>sp|O67890|FMT_AQUAE Methionyl-tRNA formyltransferase OS=Aquifex aeolicus (strain VF5)
GN=fmt PE=3 SV=1
Length = 303
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 143 KLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTE 202
K IN+H +LLP ++G ++A+ AG + TG TV V E +DAG I+ QE +PI D
Sbjct: 100 KTINLHASLLPKYRGAAPIQRAIMAGEKETGNTVMLVNEEMDAGDILAQEKIPIEEEDNF 159
Query: 203 ESLSERVKSAEHKAYPRALELVATERVK 230
+LSE++ + K L L +VK
Sbjct: 160 LTLSEKLAKSGAKLLVNTLRLWFEGKVK 187
>sp|Q9UUK7|PUR3_SCHPO Phosphoribosylglycinamide formyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ade5 PE=2 SV=1
Length = 207
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 144 LINIHPALLPLFKGMHAHRQALDAG----VRVTGCTVHFVEESVDAGAIICQESVPIYPR 199
+IN+HPAL F G+HA +A +A + TG VH+V +VD G I + VPI
Sbjct: 118 IINLHPALPGAFNGIHAIERAFEAAQQGKITHTGAMVHWVIAAVDEGKPIIVQEVPILST 177
Query: 200 DTEESLSERVKSAEHKAYPRALELVATE 227
D+ E+L E++ +AEH +A+ + T+
Sbjct: 178 DSIEALEEKIHAAEHVILVQAIHQIITD 205
>sp|O34990|PURU_BACSU Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain
168) GN=purU PE=3 SV=2
Length = 300
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L +FV+ ++INIH + LP F G + +++A + GV++ G T H+V +D G II
Sbjct: 191 ILTPDFVSAHPNRIINIHHSFLPAFIGANPYKRAYERGVKLIGATSHYVTNDLDEGPIIE 250
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERV 229
Q+ + RD E+L ++ E RA++ +RV
Sbjct: 251 QDIERVDHRDNAEALKNIGRTIERSVLARAVKWHLEDRV 289
>sp|B4S9B8|FMT_PROA2 Methionyl-tRNA formyltransferase OS=Prosthecochloris aestuarii
(strain DSM 271 / SK 413) GN=fmt PE=3 SV=1
Length = 317
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
N+H ++LP ++G A+ G R +G T F+ +SVD G +I QE P+YP +
Sbjct: 106 FNLHASILPRYRGAAPVNWAIINGERESGVTTFFLRKSVDTGNMILQEKTPVYPEENAGE 165
Query: 205 LSERVKSAEHKAYPRALELVATERVK 230
L+ R+ A + LEL+ RV+
Sbjct: 166 LAARLAEIGAGAVVKTLELIRDGRVE 191
>sp|Q46339|PURU_CORS1 Formyltetrahydrofolate deformylase OS=Corynebacterium sp. (strain
P-1) GN=purU PE=3 SV=1
Length = 286
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
VL + GK INIH + LP FKG + QA + GV+ G T H+V +D G II
Sbjct: 177 VLSDHLASELTGKTINIHHSFLPSFKGAKPYHQAWERGVKTVGATAHYVNSELDEGPIIA 236
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERVKL 231
Q+ V + + L + +E KA A+ RV L
Sbjct: 237 QQVVEVDHTYGPQDLVAAGRDSECKALSNAVRWHCEGRVFL 277
>sp|C6DFR6|FMT_PECCP Methionyl-tRNA formyltransferase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=fmt PE=3 SV=1
Length = 315
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
IN+H +LLPL++G ++AL AG TG T+ ++ +D GA++ + S PI P+DT +
Sbjct: 108 INVHGSLLPLWRGAAPIQRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILPQDTSAT 167
Query: 205 LSERVKSAEHKAYPRALELVA 225
L +++ + LEL+A
Sbjct: 168 LYDKLAELGPRGLLETLELLA 188
>sp|Q1IIS2|FMT_KORVE Methionyl-tRNA formyltransferase OS=Koribacter versatilis (strain
Ellin345) GN=fmt PE=3 SV=1
Length = 312
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 11/119 (9%)
Query: 96 IPNNRPDIVVHDKERRMALLVDIAIPNTHNMESTVVLCGEFVNRWRGKL-----INIHPA 150
+P +P+ + +++E R A L IA P+ VV G + +W L IN+H +
Sbjct: 57 LPVTQPEKIKNNEEFR-AQLSAIA-PDA----IIVVGYGRIIPQWMIDLPPLGNINVHAS 110
Query: 151 LLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEESLSERV 209
LLP ++G + A+ G VTG T ++ +D G ++ Q +PI P DT ESL+ R+
Sbjct: 111 LLPKYRGAAPIQWAIAMGEAVTGVTTMKIDAGLDTGDMLLQAEMPIAPEDTSESLAPRL 169
>sp|Q70LM7|LGRA_BREPA Linear gramicidin synthase subunit A OS=Brevibacillus parabrevis
GN=lgrA PE=1 SV=1
Length = 2273
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMH-AHRQALDAGVRVTGCTVHFVEESVDAGAII 189
+L E V+R+RG++IN+HP+LLP KG D + G T+H ++E VD G I+
Sbjct: 55 ILDKEIVSRFRGRIINLHPSLLPWNKGRDPVFWSVWDETPK--GVTIHLIDEHVDTGDIL 112
Query: 190 CQESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERV 229
QE + DT + A + + R E + R+
Sbjct: 113 VQEEIAFADEDTLLDCYNKANQAIEELFIREWENIVHGRI 152
>sp|Q55135|PURU_SYNY3 Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=purU PE=3 SV=1
Length = 284
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 131 VLCGEFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIIC 190
+L +FV ++ +INIH + LP F G + + +A + GV++ G T H+ +D G II
Sbjct: 176 ILTTDFVVQF-PNIINIHHSFLPAFPGANPYHRAHERGVKIIGATAHYATAQLDEGPIIE 234
Query: 191 QESVPIYPRDTEESLSERVKSAEHKAYPRALELVATERV 229
Q+ V + RD + L + + E RA+ L R+
Sbjct: 235 QDVVRVSHRDNVDDLIRKGRDLERVVLARAVRLHLQHRI 273
>sp|B5YIL6|FMT_THEYD Methionyl-tRNA formyltransferase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=fmt PE=3 SV=1
Length = 308
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
IN+H +LLP ++G + AL G ++TG T ++E +D G I+ Q+ + I D E+
Sbjct: 106 INLHASLLPKYRGAAPIQWALINGEKITGVTTMIIDEGLDTGPILLQKEISINDEDNAET 165
Query: 205 LSERV 209
LSE++
Sbjct: 166 LSEKL 170
>sp|Q6D001|FMT_ERWCT Methionyl-tRNA formyltransferase OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=fmt
PE=3 SV=1
Length = 315
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
IN+H +LLPL++G ++AL AG TG T+ ++ +D GA++ + + PI P+DT +
Sbjct: 108 INVHGSLLPLWRGAAPIQRALWAGDSETGVTIMQMDVGLDTGAMLHKIACPILPQDTSAT 167
Query: 205 LSERVKSAEHKAYPRALELVA 225
L +++ + + LE +A
Sbjct: 168 LYDKLAALGPRGLLETLERLA 188
>sp|B7J100|FMT_BORBZ Methionyl-tRNA formyltransferase OS=Borrelia burgdorferi (strain
ZS7) GN=fmt PE=3 SV=1
Length = 312
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 135 EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESV 194
EF++ + IN+HP+LLP ++G+ + A+ G V+G T+ + +D+G I+ Q++
Sbjct: 92 EFLDLFPKGCINVHPSLLPKYRGVSPIQSAILNGDCVSGVTIQSMALEMDSGNILVQKNF 151
Query: 195 PIYPRDTEESLSERVKSAEHKAYPRALELV-------------ATERVKLDLDSGKLDFN 241
I DT +S+ V S ALE + AT L +SG +DFN
Sbjct: 152 KIRSYDTSHDISKLVSSLSPSLVLEALEKISKGFLGIPQKSSEATFCSFLKKESGFIDFN 211
Query: 242 V 242
+
Sbjct: 212 L 212
>sp|O51091|FMT_BORBU Methionyl-tRNA formyltransferase OS=Borrelia burgdorferi (strain
ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=fmt PE=3
SV=1
Length = 312
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 135 EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESV 194
EF++ + IN+HP+LLP ++G+ + A+ G V+G T+ + +D+G I+ Q++
Sbjct: 92 EFLDLFPKGCINVHPSLLPKYRGVSPIQSAILNGDCVSGVTIQSMALEMDSGNILVQKNF 151
Query: 195 PIYPRDTEESLSERVKSAEHKAYPRALELV-------------ATERVKLDLDSGKLDFN 241
I DT +S+ V S ALE + AT L +SG +DFN
Sbjct: 152 KIRSYDTSHDISKLVSSLSPSLVLEALEKISKGFLGIPQKSSEATFCSFLKKESGFIDFN 211
Query: 242 V 242
+
Sbjct: 212 L 212
>sp|Q662V0|FMT_BORGA Methionyl-tRNA formyltransferase OS=Borrelia garinii (strain PBi)
GN=fmt PE=3 SV=1
Length = 315
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 135 EFVNRWRGKLINIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESV 194
EF++ +R IN+HP+LLP ++G+ + A+ G V+G T+ + +D+G I+ Q+
Sbjct: 92 EFLDIFRMGCINVHPSLLPKYRGVSPIQSAILNGDCVSGITIQSMALEMDSGNILVQKKF 151
Query: 195 PIYPRDTEESLSERVKSAEHKAYPRALELVA 225
I DT +S+ V S ALE ++
Sbjct: 152 KIRSYDTSYDISKLVSSLSPSLVLEALEKIS 182
>sp|A4SFP1|FMT_PROVI Methionyl-tRNA formyltransferase OS=Prosthecochloris vibrioformis
(strain DSM 265) GN=fmt PE=3 SV=1
Length = 319
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
N+H +LLP ++G AL G R +G T F++ VD G II ++S PI +
Sbjct: 111 FNLHASLLPAYRGAAPINHALIEGERESGVTTFFLQRQVDTGNIILKKSTPINSMENATQ 170
Query: 205 LSERVKSAEHKAYPRALELVATERVKLD 232
L+ER+ +A L L+A V++
Sbjct: 171 LAERLSQIGAEAVVETLRLIAEGTVEVS 198
>sp|B6IPI1|FMT_RHOCS Methionyl-tRNA formyltransferase OS=Rhodospirillum centenum (strain
ATCC 51521 / SW) GN=fmt PE=3 SV=1
Length = 309
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 14/112 (12%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
IN+H +LLP ++G ++A+ AG V+G T+ +E +D G ++ + VPI PR ++
Sbjct: 107 INVHASLLPRWRGAAPIQRAIQAGDAVSGVTIMRMEAGLDTGPMLLKGEVPIGPRTGAQA 166
Query: 205 LSERVKSAEHKAYPRALELVATERV--------------KLDLDSGKLDFNV 242
L + + + AL+ +A R+ KL + G+LDF +
Sbjct: 167 LHDALSEQGARLIVAALDGLAAGRLTAEPQPEEGVTYAAKLAKEEGRLDFAL 218
>sp|Q820J7|FMT_NITEU Methionyl-tRNA formyltransferase OS=Nitrosomonas europaea (strain
ATCC 19718 / NBRC 14298) GN=fmt PE=3 SV=1
Length = 324
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
INIH +LLP ++G ++AL G TG ++ + + +D GA++ + S+PI P DT +
Sbjct: 104 INIHASLLPRWRGAAPIQRALLEGDTETGISIMQMNQGLDTGAVLLKRSLPIEPYDTTAT 163
Query: 205 LSERVKSAEHKAYPRALELVATERV 229
L +++ K AL L+ R+
Sbjct: 164 LHDKLADLGGKCIVEALTLLDQGRL 188
>sp|Q8D341|ARNA_WIGBR Bifunctional polymyxin resistance protein ArnA OS=Wigglesworthia
glossinidia brevipalpis GN=arnA PE=3 SV=1
Length = 654
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
N+H +LLP ++G L G + TG T+H + + +D G+I+ Q S+ I +DT +S
Sbjct: 102 FNLHGSLLPKYRGCSPLNWVLINGEKTTGVTLHRMTKKIDHGSILSQYSIKIEEKDTSKS 161
Query: 205 LSERVKSAEHKAYPRALELVATERV 229
L +++ A + L ++ ++
Sbjct: 162 LYKKLCYASMYILNKTLPMILKNKI 186
>sp|A1TWN0|FMT_MARAV Methionyl-tRNA formyltransferase OS=Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8) GN=fmt PE=3 SV=1
Length = 311
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
+NIH +LLP ++G ++A+ AG TG T+ ++E +D G ++ + PI DT S
Sbjct: 104 LNIHASLLPRWRGAAPIQRAIAAGDAETGITIMQMDEGLDTGDMLLKLDTPISADDTGGS 163
Query: 205 LSERVKSAEHKAYPRALELVA 225
L +R+ KA +A+E +A
Sbjct: 164 LHDRLAEMGGKAIVQAMERLA 184
>sp|Q2IGM4|FMT_ANADE Methionyl-tRNA formyltransferase OS=Anaeromyxobacter dehalogenans
(strain 2CP-C) GN=fmt PE=3 SV=1
Length = 312
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 145 INIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEES 204
IN+H +LLP ++G + A+ G R TG T+ ++E +D G I+ Q ++ + DT E+
Sbjct: 104 INVHGSLLPRWRGAAPIQWAVAEGERETGVTIMQMDEGLDTGDILLQRALELREDDTSET 163
Query: 205 LSERVKSAEHKAYPRALELV 224
L+ R+ + +A AL L+
Sbjct: 164 LAPRLAALGGEALAEALRLL 183
>sp|B9KBC2|FMT_THENN Methionyl-tRNA formyltransferase OS=Thermotoga neapolitana (strain
ATCC 49049 / DSM 4359 / NS-E) GN=fmt PE=3 SV=1
Length = 313
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 146 NIHPALLPLFKGMHAHRQALDAGVRVTGCTVHFVEESVDAGAIICQESVPIYPRDTEESL 205
NIHP+LLP ++G ++AL+ G + TG T++ + + +DAG I Q V I P +T + L
Sbjct: 105 NIHPSLLPKYRGASPIQRALENGEKKTGVTIYRMVKELDAGPIALQREVNIDPFETFDQL 164
Query: 206 SERV 209
+R+
Sbjct: 165 EKRL 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,748,417
Number of Sequences: 539616
Number of extensions: 3463472
Number of successful extensions: 9707
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 8917
Number of HSP's gapped (non-prelim): 804
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)