RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13609
(182 letters)
>d1ig8a2 c.55.1.3 (A:225-486) Hexokinase {Baker's yeast
(Saccharomyces cerevisiae), pII [TaxId: 4932]}
Length = 262
Score = 114 bits (288), Expect = 2e-32
Identities = 30/117 (25%), Positives = 53/117 (45%)
Query: 1 FEKYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAFRTSFVSLIEQDSVDGLTH 60
FEK SG YLGE++R+ L + + G +F P TS+ + IE+D + L
Sbjct: 77 FEKMSSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDTSYPARIEEDPFENLED 136
Query: 61 YTEKVLDDLGLTYNDDDILIVQRVCHLLSLRATLLVSICTAVLVRRIDRDDITIAVD 117
+ ++ G+ + +++R+ L+ RA L A + ++ IA D
Sbjct: 137 TDDLFQNEFGINTTVQERKLIRRLSELIGARAARLSVCGIAAICQKRGYKTGHIAAD 193
Score = 66.5 bits (162), Expect = 3e-14
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 114 IAVDRIRQMCGRQLFNSEVFYYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAF 173
I +D G+Q F SG YLGE++R+ L + + G +F P
Sbjct: 63 ITIDEESPRPGQQTFE----KMSSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVM 118
Query: 174 RTSFVSLIE 182
TS+ + IE
Sbjct: 119 DTSYPARIE 127
>d1bdga2 c.55.1.3 (A:223-460) Hexokinase {Blood fluke (Schistosoma
mansoni) [TaxId: 6183]}
Length = 237
Score = 109 bits (275), Expect = 8e-31
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 1 FEKYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAFRTSFVSLIEQDSVDGLTH 60
+EK +SG YLGELVR ++ LV +LF G E L N+ T +++ +E+D L +
Sbjct: 72 YEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYN 131
Query: 61 YTEKVLDDLGL-TYNDDDILIVQRVCHLLSLRATLLVSICTAVLVRRIDRDDITIAVD 117
+ DDL + D IV+ C ++ RA L A ++RRI+R ++T+ VD
Sbjct: 132 THYMLTDDLHVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINRSEVTVGVD 189
Score = 66.0 bits (161), Expect = 3e-14
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 114 IAVDRIRQMCGRQLFNSEVFYYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAF 173
++D G+QL+ +SG YLGELVR ++ LV +LF G E L N+
Sbjct: 58 KSMDIDSLHPGKQLYE----KMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSL 113
Query: 174 RTSFVSLIE 182
T +++ +E
Sbjct: 114 LTRYLTDVE 122
>d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 243
Score = 107 bits (269), Expect = 6e-30
Identities = 49/123 (39%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 1 FEKYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAFRTSFVSLIEQDSVDGLTH 60
+EK ISG YLGE+VR +L + G LF G SE L T F T F+S IE D + L
Sbjct: 71 YEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQ- 129
Query: 61 YTEKVLDDLGLTYNDDDILIVQRVCHLLSLRATLLVSICTAVLVRRI------DRDDITI 114
+L LGL DD ++V+ VC ++S RA L A +V +I DR ++T+
Sbjct: 130 -VRAILQQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTV 188
Query: 115 AVD 117
VD
Sbjct: 189 GVD 191
Score = 63.7 bits (155), Expect = 2e-13
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 114 IAVDRIRQMCGRQLFNSEVFYYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAF 173
VD G+Q + ISG YLGE+VR +L + G LF G SE L T F
Sbjct: 57 RLVDEYSLNAGKQRYE----KMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIF 112
Query: 174 RTSFVSLIE 182
T F+S IE
Sbjct: 113 ETKFLSQIE 121
>d1v4sa2 c.55.1.3 (A:219-461) Glucokinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 243
Score = 106 bits (266), Expect = 2e-29
Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 1 FEKYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAFRTSFVSLIEQDSVDGLTH 60
+EK I GKY+GELVR+VL RLV + LLF+G +SE L T AF T FVS +E D+ D
Sbjct: 71 YEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQ- 129
Query: 61 YTEKVLDDLGLTYNDDDILIVQRVCHLLSLRATLLVSICTAVLVRRIDRD------DITI 114
+L LGL + D IV+R C +S RA + S A ++ R+ IT+
Sbjct: 130 -IYNILSTLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITV 188
Query: 115 AVD 117
VD
Sbjct: 189 GVD 191
Score = 66.8 bits (163), Expect = 2e-14
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 114 IAVDRIRQMCGRQLFNSEVFYYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAF 173
VD G+QL+ I GKY+GELVR+VL RLV + LLF+G +SE L T AF
Sbjct: 57 RLVDESSANPGQQLYE----KLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAF 112
Query: 174 RTSFVSLIE 182
T FVS +E
Sbjct: 113 ETRFVSQVE 121
>d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 243
Score = 100 bits (251), Expect = 3e-27
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 1 FEKYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAFRTSFVSLIEQDSVDGLTH 60
FEK +SG YLGELVR++L ++ ++GLLF G + +L+T F TS VS IE++ H
Sbjct: 71 FEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIEKNKEG--LH 128
Query: 61 YTEKVLDDLGLTYNDDDILIVQRVCHLLSLRATLLVSICTAVLVRRI------DRDDITI 114
+++L LG+ +DDD + VQ VC ++S R+ LV+ ++ R+ R T+
Sbjct: 129 NAKEILTRLGVEPSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTV 188
Query: 115 AVD 117
VD
Sbjct: 189 GVD 191
Score = 63.4 bits (154), Expect = 3e-13
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 114 IAVDRIRQMCGRQLFNSEVFYYISGKYLGELVRVVLCRLVRDGLLFNGVSSEDLVTPNAF 173
A+D G+QLF +SG YLGELVR++L ++ ++GLLF G + +L+T F
Sbjct: 57 RAIDAYSLNPGKQLFE----KMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKF 112
Query: 174 RTSFVSLIE 182
TS VS IE
Sbjct: 113 NTSDVSAIE 121
>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I
{Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}
Length = 418
Score = 27.1 bits (58), Expect = 1.5
Identities = 3/18 (16%), Positives = 9/18 (50%)
Query: 108 DRDDITIAVDRIRQMCGR 125
+++ A + +R+ G
Sbjct: 400 KDENLQKAAEILRKWKGS 417
>d1jb7a3 b.40.4.3 (A:329-495) Telomere end binding protein alpha
subunit {Oxytricha nova [TaxId: 200597]}
Length = 167
Score = 24.5 bits (53), Expect = 7.2
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 26 LLFNGVSSEDLVTPNAFRTSF-VSLIEQDSV 55
L + S ++L + FRT F V+ IE V
Sbjct: 25 LFHHADSDKELQAQDTFRTQFYVTKIEPSDV 55
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.327 0.144 0.413
Gapped
Lambda K H
0.267 0.0381 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 670,946
Number of extensions: 29900
Number of successful extensions: 86
Number of sequences better than 10.0: 1
Number of HSP's gapped: 82
Number of HSP's successfully gapped: 14
Length of query: 182
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 102
Effective length of database: 1,309,196
Effective search space: 133537992
Effective search space used: 133537992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 50 (24.0 bits)