BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1361
(1274 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357608358|gb|EHJ65949.1| putative DNA polymerase alpha catalytic subunit [Danaus plexippus]
Length = 1477
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/683 (55%), Positives = 485/683 (71%), Gaps = 22/683 (3%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK----NKKEGEETGEA 615
++IT + GN++SRTLMGGRSERNEFLLLHAF EK+Y++PDK YGK + E +E G
Sbjct: 771 LQITQIAGNIMSRTLMGGRSERNEFLLLHAFTEKNYIVPDKIYGKKADGDDDEQDEAGNV 830
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR--MLQD 673
+K + +KKAAY+GGLVL+PKKGFYDK I+LMDFNSLYPSIIQEYNICFTTI + D
Sbjct: 831 SKKQAKKKAAYAGGLVLDPKKGFYDKLILLMDFNSLYPSIIQEYNICFTTIKRKNGASSD 890
Query: 674 SDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKL 733
DI L LP + G+LP++I+KLVESRR+VK LMK P+L+S+L MQY+IRQ ALKL
Sbjct: 891 DDINNLV--LPAPNTEFGVLPTQIRKLVESRREVKRLMKSPDLASELYMQYNIRQMALKL 948
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCN 793
TANSMYGCLGF +SRF+A+PLAALVT KGREIL++TK +V+ LNYEV+YGDTDSLMI+ N
Sbjct: 949 TANSMYGCLGFTHSRFYAKPLAALVTMKGREILMDTKEIVQKLNYEVVYGDTDSLMINTN 1008
Query: 794 VNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICS 853
DYD VFKIGN +K E NK YKQ+ELDIDGV+KY+LLLKKKKYAA+ +SK +G+ I +
Sbjct: 1009 CLDYDYVFKIGNDLKREINKKYKQIELDIDGVFKYLLLLKKKKYAAVVVSKSKSGEFIYN 1068
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
QE KG+D+VRRDWSQLA+EAGKF+++QIL EQ + D+RL++I H+ K++ DL N
Sbjct: 1069 QEHKGLDIVRRDWSQLAAEAGKFILTQILSEQ-----TADERLESIQNHLNKLKEDLVNS 1123
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
+PL+LL ITKQLTK P EY D+ PHVQVALRLN+ NS++ K+GD + YIICEDGT+
Sbjct: 1124 KMPLSLLTITKQLTKNPNEYADKNNQPHVQVALRLNSKNSRRFKKGDIVPYIICEDGTAN 1183
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+ATQRAY+IEELKN+ L +D YYL+ Q+HPV++R+ EPIEG D R+A+CLGLD S Y
Sbjct: 1184 SATQRAYHIEELKNSEHLSVDYKYYLAHQLHPVISRICEPIEGLDPARVADCLGLDPSGY 1243
Query: 1034 RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVF 1093
R K+ I ++ + E ++ KY++C +F F C+N C+ N + R V
Sbjct: 1244 RQITKKEISNTDTYEV---ENDKEKYRYCKEFTFICVNEQCRTENRIRDTFRQVEKESVT 1300
Query: 1094 VLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCP--LG 1151
L+ C N +C V P YL + N+LS M +Y +YY GWL CEDP C + R P
Sbjct: 1301 FLERCQNEKCAVKPIDYLACIQNQLSLQMRQYHSEYYTGWLACEDPACGYRSPRLPQTFA 1360
Query: 1152 LKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCK 1211
LC C K + R YTE LY Q++FF ++ D+ K +T K +
Sbjct: 1361 AGYPLCRLCEKGVMFREYTEKDLYLQINFFLFLFDV----NKHNTTKTKISPNILSAFQV 1416
Query: 1212 MKQHVERFLESSAYNIVDLKKLF 1234
+K VE L +SAY I++L KLF
Sbjct: 1417 LKVMVEEVLANSAYAIINLSKLF 1439
Score = 314 bits (805), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 333/612 (54%), Gaps = 94/612 (15%)
Query: 39 TQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVL 98
+ + RAKRQK+DKT + +A +KLK LKG+G KHKY+ ENVY+ V E EY+ RVL
Sbjct: 2 AESLATSRAKRQKVDKTGRLSALEKLKQLKGKGSKHKYDVDELENVYDLVDESEYSNRVL 61
Query: 99 KRQEDDWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAKGD 153
+RQEDDWI+DDG GYVEDGREIFDDD D K+ ++K K P KG+
Sbjct: 62 QRQEDDWIEDDGT-GYVEDGREIFDDDEIDDTYVAKDNKETGRGHKRKAKVAPQPAGKGN 120
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKE---EP 210
I+ L+ MP KKKE+ ++++D++L+D++S+++ T + K ++V+PK+ +
Sbjct: 121 IRNLIGAMP--NKKKEDAKISDDNILSDIMSDLDGTTSSIAK-----QKLVVPKKNIVDS 173
Query: 211 PAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVD 270
A+ Y N S +K K P+KKE + V++V+ NVAE + + PV
Sbjct: 174 SKRDAQNYFKNLSSSVK---KPTPPVKKEET----------VVVDVD-NVAEDNIKPPVI 219
Query: 271 DGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV--DVTNVESVSSAVEL 328
D E+ + W ++ ++ K E +E SQ IEE D+ + S+ EL
Sbjct: 220 DQ--EKPKKSTW--------LIDKEIKKE--VEESPSQIIEEFATQDIDFGDDFSNDAEL 267
Query: 329 STSPPPQVVEKKEHKCA------------------------EWEAIQTEPSTSEPQVHSR 364
PQV KKE E +A+ + S ++ QV
Sbjct: 268 -----PQVPIKKEATMTDILQDVAEDFKEDFDIFSVKTEPKELKALSSNWSQNDNQVVVN 322
Query: 365 TADD-SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFV---KENNSHSSCCVI 420
D LPL + + +V + ++LDA+ED Y +PG VYLFGKV+V K+ +SCC++
Sbjct: 323 IQSDVQLPLQKNKDGDQVLKFYWLDAWEDKYVKPGVVYLFGKVYVNPSKKKEGCASCCLV 382
Query: 421 VQNIDRKIYLLPRSEHL------KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKY 473
V+N++R+++LLPR L T + V++ VY EF+ +A++ + +FKSRK+ K Y
Sbjct: 383 VKNVNRQLFLLPREYKLDPITLEATDQEVTMMDVYEEFNNCVASEIGLKEFKSRKVTKNY 442
Query: 474 AFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWL 533
FNLP +P +YLEV+YSA P P TFSH+FGT +S LE+ LL+RKIKGP WL
Sbjct: 443 CFNLPDIPSQCDYLEVKYSATFPIPPVGKKYLTFSHIFGTNTSSLESFLLDRKIKGPCWL 502
Query: 534 EFPEAEKFPSRISWCKYEVQCNQMEKIRITN----------VCGNVLSRTLMGGRSERNE 583
E AE +++SWCK E C++ME + + V + RT+ ++ + +
Sbjct: 503 EVKNAESVQAKVSWCKLEASCDKMENVAVIRNDSDLEPPPIVIATLNMRTVSDPKTSKTK 562
Query: 584 FLLLHAFHEKSY 595
L++ S+
Sbjct: 563 ILMMSCLAHNSF 574
>gi|242009635|ref|XP_002425588.1| DNA polymerase alpha catalytic subunit, putative [Pediculus humanus
corporis]
gi|212509481|gb|EEB12850.1| DNA polymerase alpha catalytic subunit, putative [Pediculus humanus
corporis]
Length = 1474
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/701 (50%), Positives = 489/701 (69%), Gaps = 38/701 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT + GNV+S+TL GGRSERNEFLLLHAF EK+Y++PDK + K + E+ EA+
Sbjct: 766 LQITKIAGNVMSKTLSGGRSERNEFLLLHAFTEKNYLVPDKSFSKKPRMNEDEMEASSKN 825
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
+KK Y+GGLV EPKKGFYDKFI+LMDFNSLYPSIIQEYNICFTT+ +D +
Sbjct: 826 NKKKPQYAGGLVFEPKKGFYDKFILLMDFNSLYPSIIQEYNICFTTVSRSNGEDENEINC 885
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
P + GILP EIKKLVE+RR VK LMK PNLS +L MQ++IRQ ALKLTANSMY
Sbjct: 886 ----PPDNLPLGILPIEIKKLVETRRDVKQLMKSPNLSPELYMQHNIRQMALKLTANSMY 941
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLGF SRF+A+PLAALVT+KGREILLNTK++VE +NY+VIYGDTDS+MI+ N +YD
Sbjct: 942 GCLGFSYSRFYAKPLAALVTSKGREILLNTKNIVEKMNYDVIYGDTDSVMINTNCINYDE 1001
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
VF IG++IK E NKLYK +ELDIDGV+KYMLLLKKKKYAA+ ++K +G+++ ++E KG+
Sbjct: 1002 VFTIGHKIKDEINKLYKYIELDIDGVFKYMLLLKKKKYAAVVLTKKPSGELVATKEYKGL 1061
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDW QL++E G+ +++QIL +D S +DR+ NI +H+++I DL + VP++L
Sbjct: 1062 DIVRRDWCQLSAEVGRHILNQIL-----SDLSPEDRIGNIKDHLERITVDLRDRKVPISL 1116
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
L ITKQL K PE+Y+D K+LPH+QVALR+N+ KKL+ G+T+SY+IC+DG++ QRA
Sbjct: 1117 LAITKQLAKNPEDYSDIKSLPHLQVALRMNSKGGKKLRMGNTVSYVICDDGSNLPPLQRA 1176
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+++ELK+NS+L ID+ YYL QQIHPV++RL EP+EG DA IAECLGLD + YR I++
Sbjct: 1177 YHVDELKSNSQLLIDIKYYLEQQIHPVISRLCEPVEGVDAAFIAECLGLDPTSYRKAIQK 1236
Query: 1040 SIQQSE-ENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFV 1094
S+++ E EN V + + ++ C+ F F C +C VN +++P R + V
Sbjct: 1237 SMEKDECENSTAVNDYIFGNDLEAFKRCEVFSFVCKGENCGTVNYIDSPMRDN----VPS 1292
Query: 1095 LDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKT 1154
L +C NP C P TYL +++N+L+ + +I K+Y+ WL CEDP C++ T+R P+
Sbjct: 1293 LSKCRNPSCNTSPITYLTNIVNELTIKIKTHIRKFYQNWLICEDPACTNRTQRVPMKFSN 1352
Query: 1155 R--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFD---------- 1202
+C C+K ++R YT LY Q+ ++ ++ + K + +F+
Sbjct: 1353 TFPVCNLCNKGAMYREYTSSDLYYQIKYYKHVFTLEKVKFFAFFNKKRFNFIILLLFSFF 1412
Query: 1203 --------SETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ GY +++ V + L SAYN +DL K+FS
Sbjct: 1413 LQKNYELPEDVREGYKILQEKVLKVLNMSAYNSLDLGKMFS 1453
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 297/558 (53%), Gaps = 53/558 (9%)
Query: 45 GRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDD 104
R KRQKIDK+ + AA ++LK LKG+ K+K E +NVYE V EKEY +RV RQ++D
Sbjct: 8 SRPKRQKIDKSGRSAALERLKALKGR--KNKCEIGEVDNVYEYVDEKEYAKRVRVRQDED 65
Query: 105 WIDDDGGDGYVEDGREIFDDDIED-----VPQKKEKHDKRKKNKNIQNPNAKGDIQKLLA 159
W+++ GDGY EDGREIFD D ED +K K K K + + +I +++
Sbjct: 66 WLEN-PGDGYFEDGREIFDSDDEDDLNSSSSKKSRKLSSLHKKKEKKIKSGSNNILDMVS 124
Query: 160 NMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYL 219
MPVKK+ +N+++ + +LL E + +++ +E++ T+KEYL
Sbjct: 125 KMPVKKR-----NINSENNILNLLEESLNS---ASNSSSQKSEVL---------TSKEYL 167
Query: 220 --------------ANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE-QS 264
F+ IK + P+ K+ + E + V Q+
Sbjct: 168 KMLSSHKIKNESVKPTFNSAIKTNL-VNLPVNKKTNYETSEKNGQSDLTTYSACVQNVQN 226
Query: 265 KEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSS 324
KE +++ DD + DV + ++L + A ++++ +E E +
Sbjct: 227 KETLIENSTASNDAYDDSIDFDDNMDV--DLGDIDLNVSADDTKTNKENSKPNLDEDCND 284
Query: 325 AVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRM 384
E S P E+ +EW T P+ + P + LPL T+ +KVFR
Sbjct: 285 --EFLNSIPLDDKEEIPSISSEWVDNNT-PNINVPLPNISVDKSDLPLGTNKNGEKVFRF 341
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL--KTKEP 442
F+ DA+ED KQPG VYLFGKV+ + + SCCV V+NI R+I+LLPR + KT+E
Sbjct: 342 FWWDAYEDALKQPGIVYLFGKVYYEPKKIYLSCCVAVENIPRRIFLLPRDKKFDSKTQES 401
Query: 443 ----VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA 497
+S+ VY EF++ IAT KI++FKSRK KYAF L VP SEYLE++Y A
Sbjct: 402 TETEISLLDVYKEFNENIATPNKIMNFKSRKTTLKYAFELNDVPAESEYLEIKYPATYAK 461
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQM 557
LP DLSG+TFS VFGT +S LE LLL+RKIKGP WLE + + SWCK EV+C++
Sbjct: 462 LPQDLSGETFSRVFGTNTSGLEVLLLDRKIKGPCWLEIKNPQTVNVQCSWCKLEVRCSKP 521
Query: 558 EKIRITNVCGNVLSRTLM 575
E + I++V TLM
Sbjct: 522 EDVIISDVFAPPPPLTLM 539
>gi|328711134|ref|XP_003244454.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Acyrthosiphon
pisum]
Length = 1437
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/710 (51%), Positives = 488/710 (68%), Gaps = 26/710 (3%)
Query: 540 KFPSRISWCKYEVQCNQME----KIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSY 595
KF + C + C QM ++IT V GN+LSRTL+GGR+ERNE+LLLHAF+EK Y
Sbjct: 738 KFTIMDTSCIMRLMC-QMNVLPLALQITKVAGNLLSRTLIGGRAERNEYLLLHAFNEKGY 796
Query: 596 VLPDKQYGK---NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLY 652
+LPDKQY K NK E E K GRKKA Y GGLVL+PK GFYDK I+LMDFNSLY
Sbjct: 797 ILPDKQYKKRSMNKNEDNVEEENTKKNGRKKAQYLGGLVLDPKIGFYDKMILLMDFNSLY 856
Query: 653 PSIIQEYNICFTTIPVRML----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK 708
PSIIQEYNICFTT+ R L D +I L + P V GILP+EIK LV+SRR+VK
Sbjct: 857 PSIIQEYNICFTTVSFRTLLAQEGDDEIAELLKLTPNQSVARGILPAEIKSLVDSRREVK 916
Query: 709 ALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
LM P +S+ L QY++RQ ALKLTANSMYGCLGF +SRF+A+PLAAL+TAKGREIL++
Sbjct: 917 KLMNDPKISATLKEQYNLRQTALKLTANSMYGCLGFTHSRFYAKPLAALITAKGREILIS 976
Query: 769 TKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
TK+LVE L+++VIYGDTDSLMI+ N DYD V KIG +IK+E NK+YKQ+ELDIDG++KY
Sbjct: 977 TKALVEKLSFDVIYGDTDSLMINSNCVDYDQVMKIGYKIKAEVNKMYKQVELDIDGIFKY 1036
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
MLLLKKKKYAA+SISKL +G+ I +EIKG+D+VRRDWSQL+ EAG+FV+ QIL +Q
Sbjct: 1037 MLLLKKKKYAAISISKLPSGEFITKEEIKGLDIVRRDWSQLSQEAGRFVLRQILSDQ--- 1093
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
S ++R+ NI ++K+R D + +PL LL I+K LTKAP++Y+D KALPHV +A RL
Sbjct: 1094 --SPEERVSNICAQLEKLRVDCEENNIPLGLLAISKTLTKAPQDYSDSKALPHVAIAQRL 1151
Query: 949 NNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
N S K +QGDT+SY++CEDGT+ A+ QR Y+I+ELKNN+ LKID YYLSQQIHPV+
Sbjct: 1152 NK-QSIKFRQGDTVSYVVCEDGTNFASNQRVYHIDELKNNTTLKIDFKYYLSQQIHPVIM 1210
Query: 1009 RLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQS--EENILGVGEAEEVKYQFCDKFE 1066
RL P+E DA IAE LGLD + Y++Q ++I ++ EEN + + +A ++ CD F+
Sbjct: 1211 RLCAPLEDIDAKMIAEYLGLDPAQYQNQRTKTIYENSLEENAIDLDDA--TRFSSCDPFK 1268
Query: 1067 FTCMNPSCKQVNTVEAPTRLSTHGVV-FVLDECINPECKVPPYTYLPHLINKLSQDMNKY 1125
F C+ CK + AP + +G + F L+ C N EC + PY Y+ + N L + K+
Sbjct: 1269 FKCL--GCKTEVEIFAPAIKTANGKLEFSLENCSNSECYISPYKYIGMMENTLWSAIRKH 1326
Query: 1126 IVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYIC 1185
+K+Y+ C+D C T+ P +CT C L + Y+ QL QL ++ ++
Sbjct: 1327 TIKFYKSHYVCDDSTCDYKTKYIP-RTSDEICTQCESGTLKKEYSVGQLLFQLRYYLFLF 1385
Query: 1186 DITKALTKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
DI K L ++ + + Y+ Y ++K V++ L+ + V+LK++F
Sbjct: 1386 DIDKVLLRNREIQLSVEDPLYIAYSRLKAKVQKVLKHHDFYYVNLKQIFG 1435
Score = 327 bits (838), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 222/554 (40%), Positives = 320/554 (57%), Gaps = 71/554 (12%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE 102
E R KRQK +T++F A KLK LK G KHKYE +NVYEE+SE+EYT+RV+KRQ+
Sbjct: 6 ETSRPKRQKAGQTSRFEALAKLKKLKSDGTKHKYEVEPMQNVYEEISEQEYTDRVVKRQQ 65
Query: 103 DDWIDDD-GGDGYVEDGREIFDDDIEDVP-------QKKEKHDKRKKNKNIQNPNAKGDI 154
D+WI DD DGYVEDGREIFDDD+++ + +K + K+ + P++ DI
Sbjct: 66 DNWIVDDYDVDGYVEDGREIFDDDLDEASIVKEEKKGRGKKRSRADKSFDEDLPSSNRDI 125
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVN---TTIAPTLKLNTKTNEIVIPKEEPP 211
QK+ ANMP+KKKK+ V L+ DD+L DL+ E++ + AP L N T +I K E
Sbjct: 126 QKMFANMPIKKKKEVPVNLDEDDILDDLIQELDKPGISRAPRLVHNKVTEKI---KREN- 181
Query: 212 APTAKEYLANFSKPIKVEK-----------KIEKPIKKEPSPLKDEIKSNDSVMEV-EMN 259
+ YL +FS +K + ++ I+ S L D N ++ + E+N
Sbjct: 182 --QTRGYLESFSTVVKSPRTPVNNIIIKTENTDENIESPSSKLNDSNDVNKNIFQAKELN 239
Query: 260 V-----AEQSKEEPVDDGLWEQMQ---IDDWDNSQQTQDVLPEQAKVELQIEAIESQSIE 311
E + E P+ L+++ I+D+D + Q E++ +EL S++
Sbjct: 240 AEPIKKPELATENPIKQELFDESMDDCIEDFDFEEAIQ---AEKSFMELT-----ELSVK 291
Query: 312 EKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEW--EAIQTEPSTSEPQVHSRTADDS 369
+++ T + K + + +W E +Q E + P S
Sbjct: 292 KELTKTEI-------------------KIDFEDTKWPIENVQEEEQVALPHDIS----SK 328
Query: 370 LPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
LPL +D +VFR F+LDAFED++KQPG V+LFGKV +++ SCCV+V+NI+R+++
Sbjct: 329 LPLTSDKNGTQVFRFFYLDAFEDVFKQPGVVFLFGKVKPVNFDTYVSCCVVVKNIERRMF 388
Query: 430 LLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
LLPR+ +E V + VY+EF+ + +Y+I +FKSRKI KKYAF+L V D SEYLE+
Sbjct: 389 LLPRNTTSDNEE-VKMVDVYNEFNNLTDKYQIQNFKSRKITKKYAFDLADVADESEYLEI 447
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
RYSA P LP DLSG TFS VFGT +SFLE LLL++KIKGP WL+ + S +SWCK
Sbjct: 448 RYSASHPPLPEDLSGKTFSRVFGTNTSFLELLLLDQKIKGPCWLDIKIPQLSNSPMSWCK 507
Query: 550 YEVQCNQMEKIRIT 563
EV C M+ I++
Sbjct: 508 IEVLCLDMKNIQLA 521
>gi|405964566|gb|EKC30035.1| DNA polymerase alpha catalytic subunit [Crassostrea gigas]
Length = 1492
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/693 (52%), Positives = 493/693 (71%), Gaps = 26/693 (3%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK-------NKKEGEET 612
++IT++CGNV++RTL+GGRSERNE+LLLHAF EK++++PDK+Y K + E E+
Sbjct: 793 LQITSICGNVMTRTLLGGRSERNEYLLLHAFTEKNFIVPDKEYKKTVVKEAIDDDEAEDG 852
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
G+ K GR+K AY+GGLVL+PKKGFYDK+I+L+DFNSLYPSIIQEYNICFTT+ +Q
Sbjct: 853 GKGGKSSGRRKPAYAGGLVLDPKKGFYDKYILLLDFNSLYPSIIQEYNICFTTVSRNAVQ 912
Query: 673 DSDIT---TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQK 729
SD + E LP+ ++ GILP+EI+KLVESRRQVK LMK ++S++ MQYDIRQK
Sbjct: 913 QSDKDDEEAIIE-LPDKDLEPGILPTEIRKLVESRRQVKQLMKG-DISNEQYMQYDIRQK 970
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLM 789
ALKLTANSMYGCLGF +SRFFA+PLAAL+TAKGREIL+ TK LV+++N +VIYGDTDS+M
Sbjct: 971 ALKLTANSMYGCLGFSHSRFFAKPLAALITAKGREILMKTKDLVQSMNLDVIYGDTDSIM 1030
Query: 790 ISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGK 849
I+ N ND D+V+K+GN++KSE NKLYK LE+DIDGV+K MLLLKKKKYAALS+SK +GK
Sbjct: 1031 INTNCNDIDAVYKVGNKVKSEVNKLYKLLEIDIDGVFKSMLLLKKKKYAALSVSKGPDGK 1090
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
+ +E+KG+D+VRRDWS LA EAG FV+ QIL ++ + ++NIH + ++
Sbjct: 1091 YVEHKELKGLDIVRRDWSDLAKEAGNFVVEQILSGETR-----ETIVENIHSKLMEVGEK 1145
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
+ NG +P+ L ITKQLTK PE+Y D+K+LPHVQVALR+N+ KK+K GDT+ YIIC D
Sbjct: 1146 VRNGDIPIELYYITKQLTKNPEDYPDKKSLPHVQVALRVNSKGGKKMKAGDTVPYIICAD 1205
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
G++ AA+QRAY+ EEL ++ L +D YYLSQQ+HPVV+RL +PIEGTDA +AECLGLD
Sbjct: 1206 GSTLAASQRAYHPEELAKSNTLTVDTKYYLSQQVHPVVSRLCDPIEGTDAAHLAECLGLD 1265
Query: 1030 TSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTH 1089
S Y+ + ++ E + G ++E KY+ C++F+F C P C + V+A +
Sbjct: 1266 PSGYKHTARYD-EEDEALLNGTEISDEEKYRDCERFKFVCPIPVCGREIIVDAAFTGAEE 1324
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCP 1149
+ C N +C P + P++ N+L D+ +++ KYY+GWLKCED C +TRR P
Sbjct: 1325 FTECSIGVCPNNQCNTPLNEHAPYICNRLRMDIRRHVQKYYQGWLKCEDAACGTVTRRVP 1384
Query: 1150 LGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL-TKSDTPSIKFDSETY 1206
L + +C CH+ LH +YT+ LY QL F+ +I D KAL +D K + T
Sbjct: 1385 LTFQRGHPVCHACHRGLLHPLYTDTMLYTQLCFYEHIFDADKALKCMTDGSKEKHSAATK 1444
Query: 1207 MG-----YCKMKQHVERFLESSAYNIVDLKKLF 1234
+ Y ++K V + +AY+ V+L KLF
Sbjct: 1445 LKGNEELYNQLKNLVSGVIRRNAYSEVNLDKLF 1477
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 214/604 (35%), Positives = 324/604 (53%), Gaps = 62/604 (10%)
Query: 40 QKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLK 99
Q + R++R+K D+ + AA ++LK +K G KHKY+ ++NVY+ V+E EY+E V +
Sbjct: 21 QGLAKSRSRREKRDRGGRSAALERLKKVKETGEKHKYDVEEEKNVYDIVNEDEYSEIVRQ 80
Query: 100 RQEDDWIDDDGGDGYVEDGREIFDDDIEDVP---QKKEKHDKRKKNKNIQNPNAK--GDI 154
RQ+DDWI DD G GYVEDGREIFDDD+ + P + K++ K+ KN NI P +K I
Sbjct: 81 RQDDDWIVDDDGAGYVEDGREIFDDDLNEEPGANKGKKEEKKKSKNPNIVRPGSKPKTTI 140
Query: 155 QKLLANMPV----KKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVI---PK 207
+ + A K K +++V L NDD+L DL+ E++ A +
Sbjct: 141 KSMFAAQSSTGGSKLKSEKDVSLANDDLLGDLMEELHQGPADGMMKPLPIKLKKKGFSAT 200
Query: 208 EEPPAPTAKEYLANFSKPIKVEKKIEK-----PIKKEPSPLK-----DEIKSNDSVMEVE 257
+ P P ++ ++P+K + I+ PIK EP L D + D V ++
Sbjct: 201 KSPLNPFNTNIPSSGAQPVKKKPIIKTEPRAVPIKSEPRSLPRPNIPDPEDNFDEVDGMD 260
Query: 258 MNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVT 317
M + KEE V+D S + QD E A ++L +E + +
Sbjct: 261 MGMGPAVKEEIVED----------LPQSSECQD---EAAMMDLN-----DVDFDEDLGIK 302
Query: 318 NVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHE 377
E+ V+ P ++ E WE Q + S E + LPL T
Sbjct: 303 KEETNEKLVK----PKKEISIPFETLSTGWEKYQND-SQEESVAEVKVDTSELPLVTSSN 357
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS--E 435
++V R ++LDA+ED Y PGTVYLFGKV++++ + SCCV V+NI+R+IY+LPRS +
Sbjct: 358 GEQVLRFYWLDAYEDPYSSPGTVYLFGKVWIEKAKVYVSCCVTVKNIERRIYVLPRSTRK 417
Query: 436 HLK----TKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
+LK T VS+ VYSEF++ IA ++KI FKS+K+ K+YAF VP S+YLE+R
Sbjct: 418 NLKSGSDTGIDVSMVDVYSEFNEKIAEKFKIPKFKSKKVTKQYAFEKVDVPVESDYLEIR 477
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKY 550
+ A+ P LP DL G+TF+HVFGT +S LE LL++ K+KGP WL+ + ++SWCK
Sbjct: 478 FGAEIPPLPRDLEGETFNHVFGTHTSCLELLLIDSKMKGPGWLDIKLPQIVNPQVSWCKI 537
Query: 551 EVQCNQMEKIRITN---------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ 601
EV ++ E + + N V + RTL ++ +NE + ++S+ + DK
Sbjct: 538 EVSISKPELLSVVNDQQLTPPPLVVMTLNLRTLPNHKNHQNEIVAATCLVQESFSI-DKP 596
Query: 602 YGKN 605
KN
Sbjct: 597 APKN 600
>gi|62086805|dbj|BAD92009.1| DNA polymerase alpha catalytic subunit [Iguana iguana]
Length = 1441
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/699 (52%), Positives = 479/699 (68%), Gaps = 33/699 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-YGKNKKEGEET----GE 614
++ITN+ GNV+SRTLMGGR+ERNE+LLLHAF+EK++++PDKQ + K +K+ EE G+
Sbjct: 738 LQITNIAGNVMSRTLMGGRAERNEYLLLHAFYEKNFIVPDKQLFKKTQKQLEEDEDFEGD 797
Query: 615 ANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PV 668
NK K GRKKAAYSGGLVLEPK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 798 QNKSKTGRKKAAYSGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVHRVSSSL 857
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
+ LP+ +D GILP EI+KLVE RRQVK LMKQP+L+SDL +QYDIRQ
Sbjct: 858 HKNTEDGEEEEIPELPDSSLDMGILPKEIRKLVERRRQVKQLMKQPDLNSDLYLQYDIRQ 917
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
KALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +VE +N EVIYGDTDS+
Sbjct: 918 KALKLTANSMYGCLGFSYSRFYAKPLAALVTFKGREILMHTKEMVEKMNLEVIYGDTDSI 977
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
MI+ N+ + + VFK+GN+IKSE NKLYK LE+DIDG++K +LLLKKKKYAAL + +G
Sbjct: 978 MINTNITNLEEVFKLGNKIKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTGDG 1037
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
K I QE+KG+D+VRRDW LA E G ++ISQIL +Q D ++NI + +I
Sbjct: 1038 KYITKQELKGLDIVRRDWCDLAKETGNYIISQILSDQFR-----DVIVENIQRRLIQIGE 1092
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE 968
++ NG VP+ EI K LTK P++Y D+K+LPHV VAL +N+ +KLK GDT+SY+IC+
Sbjct: 1093 NVVNGSVPIKQFEINKALTKDPQDYPDKKSLPHVHVALWINSQEGRKLKAGDTVSYVICQ 1152
Query: 969 DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
DG++ +A+QRAY E+LK L ID YYLSQQIHPVV R+ EPI+G D+V IA LGL
Sbjct: 1153 DGSNLSASQRAYAPEQLKKQENLAIDTQYYLSQQIHPVVARICEPIDGIDSVLIAAWLGL 1212
Query: 1029 DTSLYRSQIKESIQQSEEN--ILG--VGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
D S ++ + + EEN +LG V +E KY+ C++F+F C P C N +
Sbjct: 1213 DPSQFK--VYHHYHKDEENDDLLGGPVQLTDEEKYKDCERFKFAC--PKCGTENIYDNVV 1268
Query: 1085 RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
S + L C EC P+ YL + N+L D+ YI KYY WL+CE+P C
Sbjct: 1269 NGSDMMIEASLLYCSKKECNESPWKYLMQINNRLILDIRSYIKKYYTSWLRCEEPTCQYR 1328
Query: 1145 TRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA---LTKSDTPSI 1199
TRR PL LC C K + R Y++ L+ QL F+ YI D+ A LT + +
Sbjct: 1329 TRRLPLRFSKNGPLCPVCKKAVVKREYSDKVLFTQLCFYRYIFDVDYAKQKLTNQEKDRL 1388
Query: 1200 K----FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
K FD++T Y K+K V+++L S+Y+ V+L KLF
Sbjct: 1389 KSQGFFDNKTMEMYKKLKNTVDQWLAMSSYSEVNLSKLF 1427
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 192/557 (34%), Positives = 295/557 (52%), Gaps = 59/557 (10%)
Query: 83 NVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKR--- 139
+VY+E+ E++Y++ V +RQEDDWI DD G GYVEDGREIFD+D+ED K KR
Sbjct: 3 SVYDEIDEEQYSKIVRERQEDDWIVDDDGVGYVEDGREIFDEDLEDDVLDSNKKRKRDSA 62
Query: 140 --KKNKNIQN-----PNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTT--- 189
K+ KN++ PN I+ + KK + V L+ DD+L D+L ++N
Sbjct: 63 STKEKKNVKKTLVSKPNT---IKSMFMANTGKKNTDKTVDLSKDDLLGDILQDLNAESVH 119
Query: 190 IAPTLKLNTKTNEIVIPKEEP-----PAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLK 244
IAP K I P A T+K + + K + +KK + S K
Sbjct: 120 IAPPPVPVLKKKRIFGTPLNPFSLQSQAATSKRFSSVVQKTVTSDKKETFTVNSSHS--K 177
Query: 245 DEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDW--DNSQQTQDVLPEQAKVELQ- 301
+ S E ++ +++ +P ++G+ +M+ +D ++ Q D V ++
Sbjct: 178 HAVFPATSEAVKEKSLTPENEADPAENGVLLKMKQEDITKEDEQAMMDFDDGDFDVSMEE 237
Query: 302 ----IEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPS-- 355
+EA+ S E K++ + + S P++ C W+ I +
Sbjct: 238 DRTVVEAVTSVKEEVKLEDRQEDFEKTGSHFLNSSLPEIF------C--WDKIDEDEIGH 289
Query: 356 -TSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSH 414
SE QV S LPL T + +++FR ++LDA+ED Y QPG V+LFGKV+++ S+
Sbjct: 290 LASEIQVDS----SQLPLITGADGQQIFRFYWLDAYEDQYNQPGVVFLFGKVWIESAKSY 345
Query: 415 SSCCVIVQNIDRKIYLLPRSEHL------KTKEPVSIAQVYSEF-DQIATQYKILDFKSR 467
SCCV V+NI+R IYLLPR + +T+ PV++ VY EF D +A ++KI+ +KS+
Sbjct: 346 VSCCVTVKNIERTIYLLPRESRIDKCSGKETENPVTMMDVYQEFNDHVAEKFKIMKYKSK 405
Query: 468 KIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKI 527
K+EK YAF +P VP S+YLEVRYSA+ LP DL G+TFSHVFGT +S LE LL+ RKI
Sbjct: 406 KVEKNYAFEIPDVPAKSDYLEVRYSAEYSRLPQDLKGETFSHVFGTNTSSLELLLMNRKI 465
Query: 528 KGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSE 580
KGP WLE + +SWCK E+ + + + V ++ +T+ ++
Sbjct: 466 KGPGWLEIKNPQLSSQAVSWCKVELVALKPAFVNVVKDLPPPPLVIMSLSMKTVQNTKTH 525
Query: 581 RNEFLLLHAFHEKSYVL 597
+NE +++ A + L
Sbjct: 526 QNEIMVITALVHHKFCL 542
>gi|390353241|ref|XP_003728069.1| PREDICTED: DNA polymerase alpha catalytic subunit-like isoform 2
[Strongylocentrotus purpuratus]
Length = 1480
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/689 (50%), Positives = 469/689 (68%), Gaps = 25/689 (3%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+++T +CGNV+SRTLMGGRSERNE LLLHAF+EK+++ PDK+Y K + G+ + K
Sbjct: 796 LQLTTICGNVMSRTLMGGRSERNEHLLLHAFNEKNFLCPDKEYKKKTQAVNMDGDDEQEK 855
Query: 620 ---GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
+ K +Y+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQEYNICFTT+ V+ D D
Sbjct: 856 PTRSKNKPSYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEYNICFTTV-VQTPSDKDG 914
Query: 677 TT--LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
+ +P+ + GILP+EI+KLVE RRQVK LMKQP+L D+ +QYDIRQKALKLT
Sbjct: 915 SNDDWMPEVPDSDLTDGILPTEIRKLVERRRQVKGLMKQPDLHPDIRLQYDIRQKALKLT 974
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF +SRF+A+PLAALVT+KGREIL++TK LV+ +N +VIYGDTDS+MI+ N
Sbjct: 975 ANSMYGCLGFSHSRFYAKPLAALVTSKGREILMHTKELVQKMNLDVIYGDTDSIMINTNS 1034
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
D+D+VFK+GN++K+E NKLY+ LE+DIDGV++ MLLLKKKKYAA+++ +L +G + S+
Sbjct: 1035 TDHDTVFKLGNRVKTEVNKLYRLLEIDIDGVFQSMLLLKKKKYAAITVERLPDGTLKTSK 1094
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLD 911
E+KG+D+VRRDW LA + G + I QIL S D R + NIH H+ ++ +
Sbjct: 1095 EMKGLDIVRRDWCDLAKKVGSYAIDQIL--------SADSREVIVDNIHSHLVELGEKVA 1146
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN-TNSKKLKQGDTISYIICEDG 970
G +PL EI K LTKAP++Y D+K+LPHV VALRLN+ K + GDT+SYIIC DG
Sbjct: 1147 AGTIPLDQYEINKGLTKAPQDYPDKKSLPHVNVALRLNSQGGGKPIGAGDTVSYIICVDG 1206
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
++ A QRAY+ +EL+ LK+D YYL+QQ+HPVV+RL PIEGTDA IAECLGLD
Sbjct: 1207 SNLPAGQRAYHPDELRKQEHLKVDTKYYLAQQVHPVVSRLCNPIEGTDAAHIAECLGLDA 1266
Query: 1031 SLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHG 1090
S YR ++ + + +LG E +E +++ D+F+F C N +CK+ N V++ +
Sbjct: 1267 SGYRQSVRH-FEDENDALLGAQEDDEERFKDADRFKFICPNSACKRENIVDSVFTGTGSL 1325
Query: 1091 VVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPL 1150
L C + C P ++ L NKL YI KYY GWL CED C+ TRR PL
Sbjct: 1326 AEARLSYC-DSRCGTVPADHVTMLGNKLRLLTRSYIQKYYAGWLICEDTSCAHRTRRLPL 1384
Query: 1151 GLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE---T 1205
+ +C C + L Y++ +LY QL FF I D KALT+++ + E
Sbjct: 1385 NPHRQGFVCPVCQRAVLRPEYSDKELYTQLCFFQTIFDYEKALTENNDKAKSRSQEPASV 1444
Query: 1206 YMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
Y +KQ ++ L ++AY+ VDL KLF
Sbjct: 1445 RAAYQTLKQIIDVRLAANAYSEVDLSKLF 1473
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 204/606 (33%), Positives = 318/606 (52%), Gaps = 73/606 (12%)
Query: 43 EGGRAKRQKID----KTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVL 98
+ G ++R D K + +A +KLK+ K G + E N+Y+ V E EY++ V
Sbjct: 13 DAGLSRRSMRDVGKKKAGRLSALEKLKNAKKGGKRFYDEDEDMSNIYDVVDEDEYSKIVR 72
Query: 99 KRQEDDWIDDDGGDGYVEDGREIFDDDIEDVPQ--------KKEKHDKRKKNKNIQNPNA 150
RQ+DDWI DD G GYVEDGREIFD+D+ P+ + K +K ++ +
Sbjct: 73 DRQDDDWIVDDDGGGYVEDGREIFDEDLRADPEDEGESAGKRNSKSGPKKDKQSKKPSKP 132
Query: 151 KGDIQKLLANMPVKKKKKE-EVQLNNDDVLADLLSEVNT-TIAPTLKLNTKTNEIVIPKE 208
KGDI+ L + +KKK E + + D++L D+L+E+++ + P LK +I +P
Sbjct: 133 KGDIRSLFMSAAKQKKKSEKDASVAGDELLGDILNEMHSESCVPILKPLAVKKKIKVPGS 192
Query: 209 EPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSP--LKDEIKSNDSVMEVEMNVAEQSKE 266
P AN P K +P+ K +P + E KS ++ + ++Q K
Sbjct: 193 SP---------AN-RNPFS-SKTPTRPMPKTMTPRTITSE-KSAPVLIPRQRITSKQVKR 240
Query: 267 EPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVE--------------LQIEAIESQSIEE 312
E V + D S++ + V+ + VE + ++++
Sbjct: 241 EMVHEA-------GDSQQSKRARGVVVKTEPVEEFDDVDGMVDVDQTDFDIDDDDMNVKK 293
Query: 313 KVDVTNVESVSSAVELSTSPPPQVVEKKE---HKCAE--WEAIQTEPSTSEPQVHSRTAD 367
+ NV+ E PQ+ K + C+ WE I+ E ++ +
Sbjct: 294 ENGKVNVKEEEMEEEEEEEEKPQMSVKSDINPEVCSTTGWETIKGELEEDYVKMDVKVDS 353
Query: 368 DSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRK 427
SLPL T+ E +KV RM++LDA+ED YKQPGT++LFGKV+++E +H SCCV V+NI+RK
Sbjct: 354 SSLPLTTNEEGEKVLRMYWLDAYEDPYKQPGTIFLFGKVYIEEAKTHVSCCVAVKNIERK 413
Query: 428 IYLLPRSEH------LKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
+YLLPR + + T + V++ VY EFD + T+YKI+ F+S+K+ K+Y F +P
Sbjct: 414 VYLLPREKKRNLKKGVDTDKDVTMMDVYQEFDAMTTKYKIMKFRSKKVTKQYCFERSDIP 473
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLE--FPEAE 539
SEYLE+RY A P LPSDL G+TFSH+FG +S +E LLL+RK+KGPSWL+ FP+
Sbjct: 474 AESEYLEIRYGADVPQLPSDLQGETFSHIFGANTSCMELLLLDRKLKGPSWLDIKFPQ-- 531
Query: 540 KFPSR-ISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFH 591
P++ ISWCK E + + I + V + RT++ ++ RNE + + A
Sbjct: 532 -LPTQAISWCKVETYITKPDFITVIKDLTPPPLVVMTINLRTVLNQKTHRNEIVAVAALV 590
Query: 592 EKSYVL 597
+ L
Sbjct: 591 HHKFPL 596
>gi|390353239|ref|XP_003728068.1| PREDICTED: DNA polymerase alpha catalytic subunit-like isoform 1
[Strongylocentrotus purpuratus]
Length = 1480
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/689 (50%), Positives = 469/689 (68%), Gaps = 25/689 (3%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+++T +CGNV+SRTLMGGRSERNE LLLHAF+EK+++ PDK+Y K + G+ + K
Sbjct: 796 LQLTTICGNVMSRTLMGGRSERNEHLLLHAFNEKNFLCPDKEYKKKTQAVNMDGDDEQEK 855
Query: 620 ---GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
+ K +Y+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQEYNICFTT+ V+ D D
Sbjct: 856 PTRSKNKPSYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEYNICFTTV-VQTPSDKDG 914
Query: 677 TT--LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
+ +P+ + GILP+EI+KLVE RRQVK LMKQP+L D+ +QYDIRQKALKLT
Sbjct: 915 SNDDWMPEVPDSDLTDGILPTEIRKLVERRRQVKGLMKQPDLHPDIRLQYDIRQKALKLT 974
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF +SRF+A+PLAALVT+KGREIL++TK LV+ +N +VIYGDTDS+MI+ N
Sbjct: 975 ANSMYGCLGFSHSRFYAKPLAALVTSKGREILMHTKELVQKMNLDVIYGDTDSIMINTNS 1034
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
D+D+VFK+GN++K+E NKLY+ LE+DIDGV++ MLLLKKKKYAA+++ +L +G + S+
Sbjct: 1035 TDHDTVFKLGNRVKTEVNKLYRLLEIDIDGVFQSMLLLKKKKYAAITVERLPDGTLKTSK 1094
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLD 911
E+KG+D+VRRDW LA + G + I QIL S D R + NIH H+ ++ +
Sbjct: 1095 EMKGLDIVRRDWCDLAKKVGSYAIDQIL--------SADSREVIVDNIHSHLVELGEKVA 1146
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN-TNSKKLKQGDTISYIICEDG 970
G +PL EI K LTKAP++Y D+K+LPHV VALRLN+ K + GDT+SYIIC DG
Sbjct: 1147 AGTIPLDQYEINKGLTKAPQDYPDKKSLPHVNVALRLNSQGGGKPIGAGDTVSYIICVDG 1206
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
++ A QRAY+ +EL+ LK+D YYL+QQ+HPVV+RL PIEGTDA IAECLGLD
Sbjct: 1207 SNLPAGQRAYHPDELRKQEHLKVDTKYYLAQQVHPVVSRLCNPIEGTDAAHIAECLGLDA 1266
Query: 1031 SLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHG 1090
S YR ++ + + +LG E +E +++ D+F+F C N +CK+ N V++ +
Sbjct: 1267 SGYRQSVRH-FEDENDALLGAQEDDEERFKDADRFKFICPNSACKRENIVDSVFTGTGSL 1325
Query: 1091 VVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPL 1150
L C + C P ++ L NKL YI KYY GWL CED C+ TRR PL
Sbjct: 1326 AEARLSYC-DSRCGTVPADHVTMLGNKLRLLTRSYIQKYYAGWLICEDTSCAHRTRRLPL 1384
Query: 1151 GLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE---T 1205
+ +C C + L Y++ +LY QL FF I D KALT+++ + E
Sbjct: 1385 NPHRQGFVCPVCQRAVLRPEYSDKELYTQLCFFQTIFDYEKALTENNDKAKSRSQEPASV 1444
Query: 1206 YMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
Y +KQ ++ L ++AY+ VDL KLF
Sbjct: 1445 RAAYQTLKQIIDVRLAANAYSEVDLSKLF 1473
Score = 272 bits (696), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 205/606 (33%), Positives = 318/606 (52%), Gaps = 73/606 (12%)
Query: 43 EGGRAKRQKID----KTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVL 98
+ G ++R D K + +A +KLK+ K G + E N+Y+ V E EY++ V
Sbjct: 13 DAGLSRRSMRDVGKKKAGRLSALEKLKNAKKGGKRFYDEDEDMSNIYDVVDEDEYSKIVR 72
Query: 99 KRQEDDWIDDDGGDGYVEDGREIFDDDIEDVPQ--------KKEKHDKRKKNKNIQNPNA 150
RQ+DDWI DD G GYVEDGREIFD+D+ P+ + K +K ++ +
Sbjct: 73 DRQDDDWIVDDDGGGYVEDGREIFDEDLRADPEDEGESAGKRNSKSGPKKDKQSKKPSKP 132
Query: 151 KGDIQKLLANMPVKKKKKE-EVQLNNDDVLADLLSEVNT-TIAPTLKLNTKTNEIVIPKE 208
KGDI+ L N +KKK E + + D++L D+L+E+++ + P LK +I +P
Sbjct: 133 KGDIRSLFMNAAKQKKKSEKDASVAGDELLGDILNEMHSESCVPILKPLAVKKKIKVPGS 192
Query: 209 EPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSP--LKDEIKSNDSVMEVEMNVAEQSKE 266
P AN P K +P+ K +P + E KS ++ + ++Q K
Sbjct: 193 SP---------AN-RNPFS-SKTPTRPMPKTMTPRTITSE-KSAPVLIPRQRITSKQVKR 240
Query: 267 EPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVE--------------LQIEAIESQSIEE 312
E V + D S++ + V+ + VE + ++++
Sbjct: 241 EMVHEA-------GDSQQSKRARGVVVKTEPVEEFDDVDGMVDVDQTDFDIDDDDMNVKK 293
Query: 313 KVDVTNVESVSSAVELSTSPPPQVVEKKE---HKCAE--WEAIQTEPSTSEPQVHSRTAD 367
+ NV+ E PQ+ K + C+ WE I+ E ++ +
Sbjct: 294 ENGKVNVKEEEMEEEEEEEEKPQMSVKSDINPEVCSTTGWETIKGELEEDYVKMDVKVDS 353
Query: 368 DSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRK 427
SLPL T+ E +KV RM++LDA+ED YKQPGT++LFGKV+++E +H SCCV V+NI+RK
Sbjct: 354 SSLPLTTNEEGEKVLRMYWLDAYEDPYKQPGTIFLFGKVYIEEAKTHVSCCVAVKNIERK 413
Query: 428 IYLLPRSEH------LKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
+YLLPR + + T + V++ VY EFD + T+YKI+ F+S+K+ K+Y F +P
Sbjct: 414 VYLLPREKKRNLKKGVDTDKDVTMMDVYQEFDAMTTKYKIMKFRSKKVTKQYCFERSDIP 473
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLE--FPEAE 539
SEYLE+RY A P LPSDL G+TFSH+FG +S +E LLL+RK+KGPSWL+ FP+
Sbjct: 474 AESEYLEIRYGADVPQLPSDLQGETFSHIFGANTSCMELLLLDRKLKGPSWLDIKFPQ-- 531
Query: 540 KFPSR-ISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFH 591
P++ ISWCK E + + I + V + RT++ ++ RNE + + A
Sbjct: 532 -LPTQAISWCKVETYITKPDFITVIKDLTPPPLVVMTINLRTVLNQKTHRNEIVAVAALV 590
Query: 592 EKSYVL 597
+ L
Sbjct: 591 HHKFPL 596
>gi|260796197|ref|XP_002593091.1| hypothetical protein BRAFLDRAFT_120187 [Branchiostoma floridae]
gi|229278315|gb|EEN49102.1| hypothetical protein BRAFLDRAFT_120187 [Branchiostoma floridae]
Length = 1526
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/704 (51%), Positives = 481/704 (68%), Gaps = 36/704 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET------- 612
++ITN+CGN+L RTLMGGRSERNE+LLLHAF EK +++PDK YGK +
Sbjct: 823 LQITNICGNLLGRTLMGGRSERNEYLLLHAFQEKGFIVPDKTYGKKQAATHPVDVDADDD 882
Query: 613 --GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
+ KGR+K AY+GGLVLEPKKGFYDK+I+L+DFNSLYPSIIQEYNICFTTI
Sbjct: 883 DQAKPTSKKGRRKPAYAGGLVLEPKKGFYDKYILLLDFNSLYPSIIQEYNICFTTISREV 942
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
P D++ L + LP+ ++ G+LP+EI+KLVE RRQVK LMKQP+L+ DL +QY+I
Sbjct: 943 PQSQGGDAEEEQLPD-LPDADLEPGVLPTEIRKLVERRRQVKQLMKQPDLNPDLKLQYNI 1001
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQ+ALKLTANSMYGCLGF SRF+A+PLAALVT+KGREILL TK LV+ +N +VIYGDTD
Sbjct: 1002 RQQALKLTANSMYGCLGFTYSRFYAKPLAALVTSKGREILLKTKDLVQKMNLDVIYGDTD 1061
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N ++D VFK+GN++KSE NKLY+ LELDIDGV+K MLLLKKKKYAAL+ISK
Sbjct: 1062 SIMINTNSTNWDDVFKLGNKVKSEVNKLYRLLELDIDGVFKSMLLLKKKKYAALTISKNP 1121
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGK-------FVISQILDEQSYTDYSLDDRLQNI 899
+G QE+KG+D+VRRDW LA EAGK +VI QIL +Q D ++NI
Sbjct: 1122 DGSFSTGQELKGLDIVRRDWCNLAKEAGKTVAHFSSYVIGQILSDQPR-----DKIVENI 1176
Query: 900 HEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN-NTNSKKLKQ 958
HE + ++ + +G +P+ + EI K LTK P++Y D+K LPHVQVA+ +N ++ KK+
Sbjct: 1177 HEKLTEVGEKVKSGDIPVQMYEINKALTKNPQDYPDKKTLPHVQVAMWMNSHSEGKKVGA 1236
Query: 959 GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
GDTISYIICEDG+ ATQRAY + L + LKID YYLSQQ+HPVV+RL +PI+GTD
Sbjct: 1237 GDTISYIICEDGSRLPATQRAYAADRLAKDENLKIDTQYYLSQQVHPVVSRLCDPIDGTD 1296
Query: 1019 AVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEA--EEVKYQFCDKFEFTCMNPSCKQ 1076
A IAECLGLD S YR + +SE +LG A +E K++ ++F+F C P C +
Sbjct: 1297 AGIIAECLGLDPSGYRKAQQYHDDESEA-LLGGNAAMTDEEKFKDAERFKFNCPKPECGK 1355
Query: 1077 VNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC 1136
N + ++ F L +C N +C + P YL L NKL+ +++ YYEGW+KC
Sbjct: 1356 ENIWDGVFVANSPVPEFTLSQCANSQCDLAPTQYLTMLKNKLTLATRRHVKMYYEGWMKC 1415
Query: 1137 EDPGCSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK- 1193
+DP C+ TRR P+ + +C TC+K L + YT+ QLY QL F+ +I D+ KA+ K
Sbjct: 1416 DDPSCASRTRRVPMNPQRNGAVCPTCNKGILQQEYTDSQLYTQLLFYQHIFDLDKAIDKL 1475
Query: 1194 SDTPSIK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ ++ E Y +K ++ L+ + Y+ V+L KLF
Sbjct: 1476 PEKERVRPRGMKKEYLSDYHSLKTVADKRLKFNGYSEVNLNKLF 1519
Score = 223 bits (568), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 167/266 (62%), Gaps = 16/266 (6%)
Query: 347 WEAIQTEPSTSEPQVHSRTADDS-LPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGK 405
WE I+ E ++E V D S LPL T+ E + V R +++DA+ED YKQPG VY+FGK
Sbjct: 359 WETIKGEMGSAESVVTDVKVDSSSLPLVTNQEGESVLRFYWIDAYEDQYKQPGVVYMFGK 418
Query: 406 VFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL-----KTKEPVSIAQVYSEFDQ-IATQY 459
V+++ +H SCCV+V+NI+R I+LLPR L T PV+I VY EFD+ I++++
Sbjct: 419 VWIESARAHVSCCVVVRNIERSIFLLPRETRLFKNGDDTGVPVTIMDVYQEFDEKISSKH 478
Query: 460 KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLE 519
KI+ F SRK+ K+YAF VP S+YLEVRYS+ PALP+DL G+TFSHVFGT +S E
Sbjct: 479 KIMKFNSRKVTKQYAFEKLEVPVESDYLEVRYSSDLPALPADLKGETFSHVFGTNTSSTE 538
Query: 520 NLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITN--------VCGNVLS 571
LLER+IKGP WL+ +K ISWCK E + + +T V ++
Sbjct: 539 LFLLERRIKGPCWLDIKLPQKPNQPISWCKVEAFVTKAAHVSVTAETLTPPPMVVMSLSL 598
Query: 572 RTLMGGRSERNEFLLLHAF-HEKSYV 596
+TL+ ++ +NE + + A H + ++
Sbjct: 599 QTLLNPKTHQNEVVAVAALVHTRFHI 624
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 92/161 (57%), Gaps = 12/161 (7%)
Query: 39 TQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVL 98
T+ + R++R + DKT + AA +KLK +K K KYE ENVYEEV+E EY++ V
Sbjct: 10 TESLATTRSRRTRKDKTGRLAALEKLKKVKKG-EKVKYEVDELENVYEEVNEDEYSDVVR 68
Query: 99 KRQEDDWIDDDGGDGYVEDGREIFDDDI---EDVPQKKEKHDKRKKNKNIQNPNAK---- 151
RQEDDWI DD G GYVEDGREIFDDDI D P K+K K P K
Sbjct: 69 TRQEDDWIIDDDGSGYVEDGREIFDDDIAGGSDAPSAKDKKKGGPGQKKAAKPMVKKPVI 128
Query: 152 ---GDIQKLLANMPVKKKKKE-EVQLNNDDVLADLLSEVNT 188
I + + KK K E +V+L+ D++L D+L E++
Sbjct: 129 KPNNSIMSMFQSSAAKKAKNEKDVKLDEDELLGDILQEMHA 169
>gi|344251522|gb|EGW07626.1| hypothetical protein I79_016081 [Cricetulus griseus]
Length = 1016
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/1084 (41%), Positives = 621/1084 (57%), Gaps = 166/1084 (15%)
Query: 25 STRARSACSSFCVGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENV 84
T A S SF RA+R+K K + A ++LK K G K+KYE +V
Sbjct: 58 GTSAVSDSGSFV-------ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSV 109
Query: 85 YEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKR 139
YEEV E++Y++ V RQ+DDWI DD G GYVEDGREIFDDD+ED + + R
Sbjct: 110 YEEVDEEQYSKLVQARQDDDWIVDDDGTGYVEDGREIFDDDLEDDALDTSGKGSDGKAHR 169
Query: 140 KKNKNIQNPNAK--GDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLN 197
K K+++ P+ +I+ + KK + V L+ DD+L D+L ++NT ++
Sbjct: 170 KDRKDVKKPSVTKPNNIKAMFIASAGKKTADKAVDLSKDDLLGDILQDLNTDVS-----Q 224
Query: 198 TKTNEIVIPKEEPPAPTA-KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEV 256
++IPK++ + T + + K I K ++KEP IK + E+
Sbjct: 225 IAPPPVLIPKKKRSSGTLLNPFSVHSPKAIPPGKPASPVLRKEPLLTPIPIKRAEFAGEL 284
Query: 257 EMNVAEQSKEEP----VDDGLW-EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIE 311
+ ++E +DG + E M+ ++ D T ++++ E E ++ ++
Sbjct: 285 SQPECPEDEQESGIMEFEDGDFDEPMEAEEVDGEPVTARTWDQESEPE---ERVKHETDP 341
Query: 312 EKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPST---SEPQVHSRTADD 368
+K + +ES V C W+ Q + S+ E QV S
Sbjct: 342 KKGTTSFLESFLPDV----------------SC--WDMDQEDESSFLVQEVQVDST---- 379
Query: 369 SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKI 428
LPL ++++VF+ ++LDA+ED Y QPG V+LFGKV+V+ +H SCCV+V+NI+R +
Sbjct: 380 HLPLVKGADDEQVFQFYWLDAYEDPYNQPGVVFLFGKVWVESAQTHVSCCVMVKNIERTL 439
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
Y LPR +EK YAF +P VP+ SEYLE
Sbjct: 440 YFLPRE--------------------------------MTVEKNYAFEIPDVPEKSEYLE 467
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWC 548
VRYS + V T+ + L L + P L
Sbjct: 468 VRYS------------NMKVEVAATERTLLGFFLAKVHKIDPDIL--------------- 500
Query: 549 KYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NK 606
+SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +
Sbjct: 501 ---------------------VSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQ 539
Query: 607 KEGEET----GEANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
K G+E G+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NI
Sbjct: 540 KLGDEDEEVDGDTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNI 599
Query: 662 CFTTIPVRMLQDSDITTLCEY------LPEHQVDTGILPSEIKKLVESRRQVKALMKQPN 715
CFTT+ L+ + TT E LP+ +D GILP EI+KLVE R+QVK LMKQ +
Sbjct: 600 CFTTVQRVALEVQNSTTEDEEQEQIPELPDPNLDMGILPREIRKLVERRKQVKQLMKQQD 659
Query: 716 LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN 775
L+ DL++QYDIRQKALKLTANSMYGCLGF SRF+A+PLAALVT KGRE
Sbjct: 660 LNPDLVLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGRE----------- 708
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
+N EVIYGDTDS+MI+ N + D VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKK
Sbjct: 709 MNLEVIYGDTDSIMINTNSTNLDEVFKLGNKVKNEVNKLYKLLEIDIDGVFKSLLLLKKK 768
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYAAL + S+G I QE+KG+D+VRRDW LA + G FVI QIL +QS D
Sbjct: 769 KYAALVVEPTSDGNYITKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTI 823
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
++NI + + +I ++ NG +P++ EI K LTK P++Y D+K+LPHV VAL +N+ +K
Sbjct: 824 VENIQKRLIEIGENVLNGSIPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRK 883
Query: 956 LKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIE 1015
+K GDT+SY+IC+DG++ ATQRAY E+L+ L ID YYL+QQIHPVV R+ EPI+
Sbjct: 884 VKAGDTVSYVICQDGSNLTATQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPID 943
Query: 1016 GTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGE-AEEVKYQFCDKFEFTCMNPSC 1074
G DAV IA LGLD++ +R ++++ + G + +E KY+ C+KF+ C P+C
Sbjct: 944 GIDAVLIALWLGLDSTQFRVHQYHKDEETDALLGGPAQLTDEEKYKDCEKFKCPC--PTC 1001
Query: 1075 KQVN 1078
N
Sbjct: 1002 GTEN 1005
>gi|321468910|gb|EFX79893.1| hypothetical protein DAPPUDRAFT_304346 [Daphnia pulex]
Length = 1439
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/759 (48%), Positives = 503/759 (66%), Gaps = 52/759 (6%)
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKI 560
DLS D+ ++ T S+ L + + + G + L YE+ + +
Sbjct: 698 DLSSDSVKKMYSTSSNLLGMIAITMQ-DGANTLRL-------------MYELNVLPL-AL 742
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE------ 614
+IT++ GN+LSRTL+GGRSERNE+LLLHAFHEK +++PDKQ K K+GE++ E
Sbjct: 743 QITSIAGNLLSRTLLGGRSERNEYLLLHAFHEKGFIVPDKQAFKKSKKGEDSDEDVSTEN 802
Query: 615 ANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
AN+ K GR+K AY+GGLVL+PK+GFYDKF++LMDFNSLYPSIIQE+NICFTT+ +++
Sbjct: 803 ANRSKKGRRKPAYAGGLVLDPKRGFYDKFVLLMDFNSLYPSIIQEFNICFTTVDRQVVTK 862
Query: 674 SDITT--LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+ + LP+ + GILP+EI+KLV+SRR+VK L+ LS DLL+QYDIRQKAL
Sbjct: 863 ATEGEEEILPDLPDSTLPLGILPTEIRKLVDSRREVKKLIND-KLSKDLLLQYDIRQKAL 921
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLGF NSRF+A+PLAAL+T+KGREILL T+ LV +N +VIYGDTDSLMI
Sbjct: 922 KLTANSMYGCLGFSNSRFYAKPLAALITSKGREILLQTRDLVRKMNLDVIYGDTDSLMID 981
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL---SNG 848
N DYD V K+G +IK E NKLYK LELDIDGV++ +LLLKKKKYAA++++++ +
Sbjct: 982 SNSVDYDQVMKVGLKIKQEVNKLYKHLELDIDGVFQRLLLLKKKKYAAVTVTQVIRDNKK 1041
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
+M+ QE+KG+D+VRRDWSQLA+ AGK+ + QIL D S D+R+ I ++++ IR
Sbjct: 1042 EMVTQQEVKGLDIVRRDWSQLATRAGKYALEQILG-----DLSADERIARIQQNLEDIRD 1096
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE 968
NG + L+LLEITKQLTK PE Y D K L HVQVA+R N+ KKL QGDT+S+IIC+
Sbjct: 1097 GFQNGTIDLSLLEITKQLTKNPENYPDAKNLSHVQVAIRTNSRGGKKLVQGDTVSFIICQ 1156
Query: 969 DGTSEAATQRAYNIEELK--NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
DG++ AATQRAY++EELK N LK D+ YYL+QQ+HPVV+RL + +EG DAVRIAE L
Sbjct: 1157 DGSNMAATQRAYSMEELKMPTNGHLKPDIQYYLAQQVHPVVSRLCDLLEGIDAVRIAEFL 1216
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGE---AEEVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
G+D S YRS Q+ N G +E ++Q C+KF + C + +C +++
Sbjct: 1217 GIDASGYRS------TQAASNEYDTGSPPVTDEERFQSCEKFYYQCSDKACGFEMSMDNV 1270
Query: 1084 TRLSTHGVV-FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
R + G + F L C NP CK P++ L+N+L+ + K+I YY GWL CED C+
Sbjct: 1271 FRKTDDGNIEFALSRCGNPNCKKTPFSAEKFLVNRLTHTVRKHIQLYYAGWLVCEDRSCA 1330
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK-----SD 1195
TRR PL +C C + Y +L LY QL ++ ++ D +KA+++ D
Sbjct: 1331 TRTRRIPLKSTNTHPVCIGCGTSNMDPEYNDLDLYTQLCYYQHMFDASKAISQLQPSERD 1390
Query: 1196 TPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ +++ Y + ++ + L S Y+ V+L LF
Sbjct: 1391 KVKLAYNNSMDKAYKALLNNINQILLESGYSQVNLAGLF 1429
Score = 202 bits (514), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 141/223 (63%), Gaps = 8/223 (3%)
Query: 347 WEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKV 406
WE I+ ++ + LPL + ++ RM++ DA+ED Y QPGTV+LFGK+
Sbjct: 281 WETIKNNVDVNQSVAVLDLGSNELPLTQGEDGEQFLRMYWFDAYEDPYMQPGTVFLFGKI 340
Query: 407 FVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPVSIAQVYSEFD-QIATQY 459
F++ ++ SCCV V+NI++ IY+LPR + T PV+ VY EF+ ++A +Y
Sbjct: 341 FIESAKAYVSCCVSVKNIEKHIYVLPRDTVVDQRTGQDTGTPVNFMDVYEEFNTRVADRY 400
Query: 460 KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLE 519
KIL FKSR++ KKY F P +P SEYLEV+YSA+ +LP++L G TFSHVFG +S LE
Sbjct: 401 KILQFKSRRVLKKYGFEPPSIPRESEYLEVKYSAE-HSLPTNLKGATFSHVFGANTSALE 459
Query: 520 NLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
N LLE+++KGP WL +K +SWCK E + M++I +
Sbjct: 460 NFLLEKRVKGPCWLNIKNPQKANPHVSWCKVEAFVSNMDQIEL 502
Score = 126 bits (316), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 102/156 (65%), Gaps = 10/156 (6%)
Query: 39 TQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVL 98
+Q E GR +R K D+ K AAFQKLKDLKG K+K T +NVYEEV E+EY++RV
Sbjct: 8 SQDKESGRTRRTKQDREGKSAAFQKLKDLKG--TKNKVTLTEVDNVYEEVDEREYSKRVQ 65
Query: 99 KRQEDDWIDDDGGDGYVEDGREIF--DDDIEDVPQKK---EKHDKRKKNKNIQNPNAKGD 153
+RQEDDWI DD G GYVEDGRE+F D D ++V Q K H K+ +K + P K +
Sbjct: 66 RRQEDDWIIDDDGSGYVEDGREVFDDDLDDDNVAQAKGAARGHKKKDLSKGV--PGRKNN 123
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTT 189
I+ +L M K K+K + + +DD+L D++ E+N+T
Sbjct: 124 IKNMLIGMSSKNKEK-DAKTKDDDILGDIMQELNST 158
>gi|326679675|ref|XP_001922054.2| PREDICTED: DNA polymerase alpha catalytic subunit [Danio rerio]
Length = 1439
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/698 (51%), Positives = 475/698 (68%), Gaps = 34/698 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE--GE-ETGEAN 616
++ITN+ GNV+SRTLMGGRSERNE+LLLHAFHE+ +++PDKQ+ K ++ GE E G++
Sbjct: 746 LQITNIAGNVMSRTLMGGRSERNEYLLLHAFHERDFIVPDKQFFKKAQQDLGEDEEGDSG 805
Query: 617 KGKG---RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP-----V 668
KGK RKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 806 KGKSNKTRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVERGATNT 865
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
R + D + E LP+ ++ GILP EI+KLVE RRQVK LMK+P+L+ DL +QYDIRQ
Sbjct: 866 RKKTEEDEDEIPE-LPDQSLEMGILPKEIRKLVERRRQVKQLMKEPDLNPDLYLQYDIRQ 924
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
KALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS+
Sbjct: 925 KALKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKEMVQRMNLEVIYGDTDSI 984
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + +G
Sbjct: 985 MINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALMVEPQGDG 1044
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
K QE+KG+D+VRRDW LA E G +VI QIL +Q+ D ++NI +H+ +I
Sbjct: 1045 KYTTKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQNR-----DTIIENIQKHLIEIGE 1099
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE 968
+ NG +PL + EI K LTK P++Y D+K+LPHV VAL +N+ KK+K GDT+SY+IC+
Sbjct: 1100 KVANGNIPLNMFEIHKSLTKEPQDYPDKKSLPHVHVALWINSQGGKKVKAGDTVSYVICQ 1159
Query: 969 DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
DG++ AA+QRAY +E+L+ L +D YYLSQQ+HPVV R+ EPIEG DAV IA LGL
Sbjct: 1160 DGSNLAASQRAYTLEQLQKQPGLNLDTQYYLSQQVHPVVGRICEPIEGIDAVLIATWLGL 1219
Query: 1029 DTSLYRSQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL 1086
D S +R+Q ++ + ++ LG +E +Y+ C++F FTC P C N +
Sbjct: 1220 DPSHFRAQ-QQQREDEADDFLGAPAQLTDEERYRDCERFTFTC--PDCGTENIYDNVFEG 1276
Query: 1087 STHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
+ + L C + C P + + NKL D+ ++I +YY GWL CED C + R
Sbjct: 1277 TGSTLQLSLKSCCHVPCGGSPMDHQVQIGNKLQLDIRRHIRRYYSGWLLCEDQACRNRIR 1336
Query: 1147 RCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICD----ITKALTKSDTPSIK 1200
R P+ +C C + L Y+E LY QLSF+ YI D I K LT D +K
Sbjct: 1337 RLPIAFSRSGPICPACLRSTLKPEYSEKALYNQLSFYRYIFDWEYAINKVLTGDD--KLK 1394
Query: 1201 FDSETYMG----YCKMKQHVERFLESSAYNIVDLKKLF 1234
F S+ + Y K+K + L +S Y+ V+L KLF
Sbjct: 1395 FKSKEWKEEMEVYKKLKGVTDNILATSGYSEVNLAKLF 1432
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 204/582 (35%), Positives = 317/582 (54%), Gaps = 58/582 (9%)
Query: 39 TQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVL 98
T + R++R+K +K + +A ++LK K +G K KYE ++Y+EV E++Y++ V
Sbjct: 8 TCGIAASRSRREKKEKVGRKSALEQLKRAK-KGEKVKYEVEEFTSIYDEVDEEQYSKIVR 66
Query: 99 KRQEDDWIDDDGGDGYVEDGREIFDDDIED---VPQKKE--KHDKRKKN---KNIQNPNA 150
+RQ+DDWI DD G GYVEDGREIFD++++D P+ K+ K KKN ++ PN+
Sbjct: 67 ERQDDDWIIDDDGTGYVEDGREIFDEELDDDALGPKSKQAAKGGDSKKNVKKSSVSKPNS 126
Query: 151 KGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEP 210
I+ + N VKK ++ V L+ DD+L D+L + L+++ + ++ P P
Sbjct: 127 ---IKSMFMNSNVKKPAEKHVDLSQDDLLGDILQD----------LHSEKSVVLTP---P 170
Query: 211 PAPT--AKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEP 268
P T K+ L + P V K + P K P P D + + +E A Q K+
Sbjct: 171 PIITLKKKKTLGSPMNPFSV--KPQMPKVKIPIPPADPSPRSAASVEPSKATAAQIKKPK 228
Query: 269 VDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVEL 328
+++ E ++ D+ D + ++ E +E + ++EK + V VE
Sbjct: 229 IEEPEEEAIEFDEMDFDE------------PMEAENLEEEPVKEKAEPETKPIVK--VEP 274
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
T P +++ WE ++ E E V + LPL + VFR ++LD
Sbjct: 275 KTEPQDKMLISGLVGGMGWEKME-EGKPIETPVEVQVDSSQLPLVEGPDGDMVFRFYWLD 333
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH---LKTKE---P 442
AFED Y QPG V+LFGKV+++ +H SCCV V+NI+R +YLLPR EH L T E
Sbjct: 334 AFEDQYNQPGVVFLFGKVWIESAEAHVSCCVAVKNIERTMYLLPR-EHKVNLATGEKGVA 392
Query: 443 VSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDL 502
V + VY EF++I+ ++KI+ FKS+ + K YAF +P +P SEYLEV+YSA+ P+LPSDL
Sbjct: 393 VGMMDVYKEFNEISEKFKIMKFKSKPVTKNYAFEIPDIPSQSEYLEVKYSAEIPSLPSDL 452
Query: 503 SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
G TFSHVFGT +S LE+ LL RKI+GP WL+ + ISWCK E + + I +
Sbjct: 453 KGTTFSHVFGTNTSSLEHFLLNRKIRGPCWLDVTTPQLSNQPISWCKVEAVAQKSDLISV 512
Query: 563 TN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
V ++ +T+ ++ +NE + + A ++ L
Sbjct: 513 VKDLSPPPLVVMSISLKTVQNPKTHQNEIVSIAALVHHTFPL 554
>gi|118084071|ref|XP_416792.2| PREDICTED: DNA polymerase alpha catalytic subunit [Gallus gallus]
Length = 1496
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/701 (51%), Positives = 472/701 (67%), Gaps = 35/701 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-----KEGEETGE 614
++ITN+ GNV+SRT+MGGRSERNEFLLLHAF+EK Y++PDKQ K E E+ +
Sbjct: 791 LQITNISGNVMSRTMMGGRSERNEFLLLHAFYEKDYIVPDKQVFKKPLQKLVDEDEDFED 850
Query: 615 ANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
NK K G+KKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ R+ +
Sbjct: 851 QNKSKIGKKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQ-RLSSE 909
Query: 674 SD------ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
+ LP+ ++ GILP EI+KLVE RRQVK LMKQP+L+ DL +QYDIR
Sbjct: 910 AQKRAEVEEEEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLYLQYDIR 969
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 970 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYGDTDS 1029
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + D VFK+GN+IKSE NKLYK LE+DIDGV+K +LLLKKKKYAAL++ +
Sbjct: 1030 IMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALTVEPTGD 1089
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
GK + QE+KG+D+VRRDW LA E G +VI QIL +Q D ++NI + +I
Sbjct: 1090 GKYVTKQELKGLDIVRRDWCDLAKETGNYVIGQILSDQPR-----DIIVENIQRRLIEIG 1144
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG +P+ EI K LTK P++Y D+K+LPHV VA+ +N+ +K+K GDT+SYIIC
Sbjct: 1145 ENVINGQIPVNQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKAGDTVSYIIC 1204
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ +A+QRAY E+L+ L ID YYLSQQIHPVV R+ EPIEG D+V IA LG
Sbjct: 1205 QDGSNLSASQRAYAPEQLQKQDNLTIDTQYYLSQQIHPVVARICEPIEGIDSVLIATWLG 1264
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
LD S +R + + EEN VG +E KY+ C++F+F C+ C N +
Sbjct: 1265 LDPSQFR--VHHHYHKDEENDALVGGPAQLTDEEKYRDCERFKFCCLK--CGTENIYDNV 1320
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
S + L C EC+ PP+ ++ + NKL D+ +Y+ KYY GWL CEDP C +
Sbjct: 1321 FDCSGRFIEPSLQRCSKSECEEPPFNHVVQMNNKLLLDIRRYLKKYYNGWLICEDPTCQN 1380
Query: 1144 LTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDI----TKALTKSDTP 1197
TRR PL +C C K L Y++ LY QL F+ YI D+ K +T+ D
Sbjct: 1381 RTRRLPLSFSRSGPICQACRKAILRPEYSDKALYTQLCFYRYIFDVEYATDKVITEEDRE 1440
Query: 1198 SIK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
++ E Y K+K V++ L S+Y+ V+L KLFS
Sbjct: 1441 FVRRKPLRKEVSEAYRKLKSTVDKCLSLSSYSEVNLGKLFS 1481
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 276/534 (51%), Gaps = 62/534 (11%)
Query: 60 AFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGR 119
A ++LK K G K KYE VY+E+ E++Y++ V +RQ+DDWI DD G GYVEDGR
Sbjct: 30 ALERLKKAKA-GEKLKYEVEEFTGVYDEIDEEQYSKIVRERQDDDWIVDDDGIGYVEDGR 88
Query: 120 EIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLLANMPVKKKKKEEVQ 172
EIFD+D++D K K K I N K I+ + KK + V
Sbjct: 89 EIFDEDLDDDALGSSKKGKTGKTSTIGKKNVKKSVVAKPNTIKSMFIASAGKKNTDKTVD 148
Query: 173 LNNDDVLADLLSEVNTTIA-----PTLKLNTK------TNEIVIPKEEPPAPTAKEYLAN 221
L+ DD+L D+L ++N P L L K N + ++ P T A
Sbjct: 149 LSKDDLLGDILQDLNAETVQLSPPPILVLKRKRSAGMPLNPFSVQRQSPKVITPVSKKA- 207
Query: 222 FSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDG----LWEQM 277
P+++ K+ P P K + SV E N + ++ ++G E+
Sbjct: 208 ---PVQLRKEARPPASFHP---KHPNYTAKSVTASEENEDTKYVQKATENGRVVKTKEEK 261
Query: 278 QIDDWDNSQQTQDVLPEQAKVELQI-----EAIESQSIEEKVDVTNVESVSS----AVEL 328
I+D D D +E ++ E E+ +++V+ +E + S A L
Sbjct: 262 AIEDDDQGMMDFDDEDFDEPMEAELMGAVPETAETLKRDKEVEKKEMEQLESKKKEASAL 321
Query: 329 STS-PPPQVVEKKEHKCAEWEA--IQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMF 385
S S P +K E A+ A +Q +P+ LPL + +V R +
Sbjct: 322 SHSLPDISCWDKVEEDEADLVATDVQLDPNL-------------LPLVNGENDDQVLRFY 368
Query: 386 FLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KT 439
+LDA+ED Y QPG V+LFGKV+++ N++ SCCV V+NI+R +YLLPR + +T
Sbjct: 369 WLDAYEDQYSQPGVVFLFGKVWIESANTYVSCCVTVKNIERTVYLLPRETEMDLSSGKET 428
Query: 440 KEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPAL 498
+ PV+I V+ EF D I+ +YKI+ FKS+K+EK YAF +P VP SEYLEV+YSA+ P L
Sbjct: 429 ETPVTIMNVFKEFNDCISPKYKIMKFKSKKVEKYYAFEIPDVPAKSEYLEVKYSAEYPRL 488
Query: 499 PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
P DL G+TFSH FGT +S LE LL+ RKIKGP WLE + +SWCK E
Sbjct: 489 PQDLKGETFSHAFGTNTSSLELLLMSRKIKGPCWLEIKNPQPSNQSVSWCKVEA 542
>gi|326913507|ref|XP_003203079.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Meleagris
gallopavo]
Length = 1503
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/706 (50%), Positives = 475/706 (67%), Gaps = 38/706 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-----KEGEETGE 614
++ITN+ GNV+SRT+MGGRSERNEFLLLHAF+EK Y++PDKQ K E E+ +
Sbjct: 791 LQITNISGNVMSRTMMGGRSERNEFLLLHAFYEKDYIVPDKQVFKKPLQKLVDEDEDFED 850
Query: 615 ANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
NK K GRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ R+ +
Sbjct: 851 QNKSKMGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQ-RLSSE 909
Query: 674 SD------ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
+ LP+ ++ GILP EI+KLVE RRQVK LMKQP+L+ DL +QYDIR
Sbjct: 910 AQKRAEVEEEEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLYLQYDIR 969
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 970 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYGDTDS 1029
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + D VFK+GN+IKSE NKLYK LE+DIDGV+K +LLLKKKKYAAL++ +
Sbjct: 1030 IMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALTVEPTGD 1089
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
GK + QE+KG+D+VRRDW LA E G +VI QIL +Q D ++NI + +I
Sbjct: 1090 GKYVTKQELKGLDIVRRDWCDLAKETGNYVIGQILSDQPR-----DVIVENIQRRLIEIG 1144
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG +P+ EI K LTK P++Y D+K+LPHV VA+ +N+ +K+K GDT+SYIIC
Sbjct: 1145 ENVINGQIPVNQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKAGDTVSYIIC 1204
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ +A+QRAY E+L+ L ID YYLSQQIHPVV R+ EPIEG D+V IA LG
Sbjct: 1205 QDGSNLSASQRAYAPEQLQKQDNLTIDTQYYLSQQIHPVVARICEPIEGIDSVLIATWLG 1264
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQV--NTVE 1081
LD S +R + + EEN VG +E KY+ C++F+F C+ + + N +
Sbjct: 1265 LDPSQFR--VHHHYHKDEENDALVGGPAQLTDEEKYRDCERFKFCCLKCGTENIYDNVFD 1322
Query: 1082 APTRLSTHGVVFV---LDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCED 1138
R + F+ L C EC+ PP+ ++ + NKL D+ +++ +YY GWL CE+
Sbjct: 1323 CSGRFIEPSLXFIEPSLQRCSKSECEEPPFNHVVQMNNKLLLDIRRHLKRYYSGWLICEE 1382
Query: 1139 PGCSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDI----TKALT 1192
P C + TRR PL +C C K L Y+ LY QL F+ YI D+ K +T
Sbjct: 1383 PTCQNRTRRLPLSFSRSGPICQACRKAILRPEYSAKALYTQLCFYRYIFDVEYAMDKVIT 1442
Query: 1193 KSDTPSIKFDS---ETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ D +K S E Y K+K V++ L S+Y+ V+L KLFS
Sbjct: 1443 EEDKEFVKRKSLRREVTDAYRKLKSTVDKCLSLSSYSEVNLGKLFS 1488
Score = 247 bits (630), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 189/534 (35%), Positives = 276/534 (51%), Gaps = 62/534 (11%)
Query: 60 AFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGR 119
A ++LK K G K KYE VY+E+ E++Y++ V +RQ+DDWI DD G GYVEDGR
Sbjct: 30 ALERLKKAKA-GEKLKYEVEEFTGVYDEIDEEQYSKIVRERQDDDWIVDDDGIGYVEDGR 88
Query: 120 EIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLLANMPVKKKKKEEVQ 172
EIFD+D++D K K K N K I+ + KK + V
Sbjct: 89 EIFDEDLDDDALDSSKKGKSGKASTTDKKNVKKSVVSKPNTIKSMFIASAGKKNTDKTVD 148
Query: 173 LNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKI 232
L+ DD+L D+L ++N A T++L+ ++ K P L FS + K I
Sbjct: 149 LSKDDLLGDILQDLN---AETVQLSPPPILVLKRKRSAGMP-----LNPFSVQSQAPKVI 200
Query: 233 EKPIKKEPSPLKDEI------------KSNDSVMEVEMNVAEQSKEEPVDDGLW----EQ 276
KK P L+ E + SV E N + ++P ++G E+
Sbjct: 201 TPVSKKAPVQLRKEALPPASFHPKHPNYTAKSVTASEENEDTKFVQKPTENGRIVKTKEE 260
Query: 277 MQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIE--------EKVDVTNVESVSSAVEL 328
I+D D D +E ++ +++E EK + +ESV +
Sbjct: 261 KAIEDDDQGMMDFDDEDFDEPMEAELMGTVPETVETSKRDKEVEKKEREQLESVKKETSV 320
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEPS---TSEPQVHSRTADDSLPLATDHENKKVFRMF 385
+ P + C W+ + + + ++ Q+ + LPL + +V R +
Sbjct: 321 LSYSLPDI------SC--WDKVDEDEADLVVTDVQLDP----NLLPLVHGENDDQVLRFY 368
Query: 386 FLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KT 439
+LDA+ED Y QPG V+LFGKV+++ N++ SCCV V+NI+R +YLLPR + +T
Sbjct: 369 WLDAYEDQYSQPGVVFLFGKVWIESANTYVSCCVTVKNIERTVYLLPRETEMDLSSGKET 428
Query: 440 KEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPAL 498
+ PV+I V+ EF D I+ +YKI+ FKS+K+EK YAF +P VP SEYLEV+YSA+ P L
Sbjct: 429 ETPVTIMNVFKEFNDSISPKYKIMKFKSKKVEKYYAFEIPDVPAKSEYLEVKYSAEYPRL 488
Query: 499 PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
P DL G+TFSH FGT +S LE LL+ RKIKGP WLE + +SWCK E
Sbjct: 489 PQDLKGETFSHAFGTNTSSLELLLMSRKIKGPCWLEIKNPQPSNQSVSWCKIEA 542
>gi|62086809|dbj|BAD92011.1| DNA polymerase alpha catalytic subunit [Gallus gallus]
Length = 1462
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/701 (51%), Positives = 472/701 (67%), Gaps = 35/701 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-----KEGEETGE 614
++ITN+ GNV+SRT+MGGRSERNEFLLLHAF+EK Y++PDKQ K E E+ +
Sbjct: 757 LQITNISGNVMSRTMMGGRSERNEFLLLHAFYEKDYIVPDKQVFKKPLQKLVDEDEDFED 816
Query: 615 ANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
NK K G+KKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ R+ +
Sbjct: 817 QNKSKIGKKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQ-RLSSE 875
Query: 674 SD------ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
+ LP+ ++ GILP EI+KLVE RRQVK LMKQP+L+ DL +QYDIR
Sbjct: 876 AQKRAEVEEEEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLYLQYDIR 935
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 936 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYGDTDS 995
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + D VFK+GN+IKSE NKLYK LE+DIDGV+K +LLLKKKKYAAL++ +
Sbjct: 996 IMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALTVEPTGD 1055
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
GK + QE+KG+D+VRRDW LA E G +VI QIL +Q D ++NI + +I
Sbjct: 1056 GKYVTKQELKGLDIVRRDWCDLAKETGNYVIGQILSDQPR-----DIIVENIQRRLIEIG 1110
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG +P+ EI K LTK P++Y D+K+LPHV VA+ +N+ +K+K GDT+SYIIC
Sbjct: 1111 ENVINGQIPVNQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKAGDTVSYIIC 1170
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ +A+QRAY E+L+ L ID YYLSQQIHPVV R+ EPIEG D+V IA LG
Sbjct: 1171 QDGSNLSASQRAYAPEQLQKQDNLTIDTQYYLSQQIHPVVARICEPIEGIDSVLIATWLG 1230
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
LD S +R + + EEN VG +E KY+ C++F+F C+ C N +
Sbjct: 1231 LDPSQFR--VHHHYHKDEENDALVGGPAQLTDEEKYRDCERFKFCCLK--CGTENIYDNV 1286
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
S + L C EC+ PP+ ++ + NKL D+ +Y+ KYY GWL CEDP C +
Sbjct: 1287 FDCSGRFIEPSLQRCSKSECEEPPFNHVVQMNNKLLLDIRRYLKKYYNGWLICEDPTCQN 1346
Query: 1144 LTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDI----TKALTKSDTP 1197
TRR PL +C C K L Y++ LY QL F+ YI D+ K +T+ D
Sbjct: 1347 RTRRLPLSFSRSGPICQACRKAILRPEYSDKALYTQLCFYRYIFDVEYAMDKVITEEDRE 1406
Query: 1198 SIK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
++ E Y K+K V++ L S+Y+ V+L KLFS
Sbjct: 1407 FVRRKPLRKEVSEAYRKLKSTVDKCLSLSSYSEVNLGKLFS 1447
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 199/579 (34%), Positives = 293/579 (50%), Gaps = 75/579 (12%)
Query: 71 GVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVP 130
G K KYE VY+E+ E++Y++ V +RQ+DDWI DD G GYVEDGREIFD+D++D
Sbjct: 6 GEKLKYEVEEFTGVYDEIDEEQYSKIVRERQDDDWIVDDDGIGYVEDGREIFDEDLDDDA 65
Query: 131 QKKEKHDKRKKNKNIQNPNAK-------GDIQKLLANMPVKKKKKEEVQLNNDDVLADLL 183
K K K I N K I+ + KK + V L+ DD+L D+L
Sbjct: 66 LGSSKKGKTGKTSTIGKKNVKKSVVAKPNTIKSMFIASAGKKNTDKTVDLSKDDLLGDIL 125
Query: 184 SEVNT-----TIAPTLKLNTK------TNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKI 232
++N + P L L K N + ++ P T A P+++ K+
Sbjct: 126 QDLNAETVQLSPPPILVLKRKRSAGMPLNPFSVQRQSPKVITPVSKKA----PVQLRKEA 181
Query: 233 EKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDG----LWEQMQIDDWDNSQQT 288
P P K + SV E N + ++ ++G E+ I+D D
Sbjct: 182 RPPASFHP---KHPNYTAKSVTASEENEDTKYVQKATENGRVVKTKEEKAIEDDDQGMMD 238
Query: 289 QDVLPEQAKVELQI-----EAIESQSIEEKVDVTNVESVSS----AVELSTS-PPPQVVE 338
D +E ++ E E+ +++V+ +E + S A LS S P +
Sbjct: 239 FDDEDFDEPMEAELMGAVPETAETLKRDKEVEKKEMEQLESKKKEASALSHSLPDISCWD 298
Query: 339 KKEHKCAEWEA--IQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQ 396
K E A+ A +Q +P+ LPL + +V R ++LDA+ED Y Q
Sbjct: 299 KVEEDEADLVATDVQLDPNL-------------LPLVNGENDDQVLRFYWLDAYEDQYSQ 345
Query: 397 PGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPVSIAQVYS 450
PG V+LFGKV+++ N++ SCCV V+NI+R +YLLPR + +T+ PV+I V+
Sbjct: 346 PGVVFLFGKVWIESANTYVSCCVTVKNIERTVYLLPRETEMDLSSGKETETPVTIMNVFK 405
Query: 451 EF-DQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSH 509
EF D I+ +YKI+ FKS+K+EK YAF +P VP SEYLEV+YSA+ P LP DL G+TFSH
Sbjct: 406 EFNDCISPKYKIMKFKSKKVEKYYAFEIPDVPAKSEYLEVKYSAEYPRLPQDLKGETFSH 465
Query: 510 VFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNV 569
VFGT +S LE LL+ RKIKGP WLE + +SWCK E K + NV ++
Sbjct: 466 VFGTNTSSLELLLMSRKIKGPCWLEIKNPQPSNQSVSWCKVEAVAM---KPGLVNVVKDL 522
Query: 570 LS-----------RTLMGGRSERNEFLLLHAFHEKSYVL 597
L +T+ ++ +NE + + A + + L
Sbjct: 523 LPPPPLVVMSFSMKTIQNPKTHQNEIVAMAALIHQKFPL 561
>gi|354492237|ref|XP_003508256.1| PREDICTED: DNA polymerase alpha catalytic subunit isoform 2
[Cricetulus griseus]
Length = 1462
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/698 (51%), Positives = 477/698 (68%), Gaps = 29/698 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEVDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ L+
Sbjct: 826 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVALE 885
Query: 673 DSDITTLCEY------LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
+ TT E LP+ +D GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 886 VQNSTTEDEEQEQIPELPDPNLDMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 945
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 946 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1005
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + D VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1006 SIMINTNSTNLDEVFKLGNKVKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1065
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G I QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1066 DGNYITKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1120
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG +P++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1121 GENVLNGSIPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1180
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ ATQRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1181 CQDGSNLTATQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIALWL 1240
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGE-AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTR 1085
GLD++ +R ++++ + G + +E KY+ C+KF+ C P+C N +
Sbjct: 1241 GLDSTQFRVHQYHKDEETDALLGGPAQLTDEEKYKDCEKFKCPC--PTCGTENIYDNVFE 1298
Query: 1086 LSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
S + L C N +CK P T++ L NKL+ D+ I KYY+GWL CE+P C T
Sbjct: 1299 GSGIDLEPSLYRCSNVDCKASPLTFMVQLSNKLTMDIRHCIKKYYDGWLICEEPTCRSRT 1358
Query: 1146 RRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA---LTKSDTPSIK 1200
RR PL LC C K L Y++ LY QL F+ YI D+ A LT+ + +K
Sbjct: 1359 RRLPLHFSRNGPLCPVCMKAVLRPEYSDKSLYTQLCFYRYIFDVDCALEKLTEHEKDKLK 1418
Query: 1201 ---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
F + Y K+K E FL S Y+ V+L KLF+
Sbjct: 1419 KQFFTPKVLHDYKKIKNIAEHFLSWSGYSEVNLSKLFA 1456
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 201/584 (34%), Positives = 310/584 (53%), Gaps = 61/584 (10%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD+ED + + RK K+++ P+ +I+
Sbjct: 77 DWIVDDDGTGYVEDGREIFDDDLEDDALDTSGKGSDGKAHRKDRKDVKKPSVTKPNNIKA 136
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA- 215
+ KK + V L+ DD+L D+L ++NT ++ ++IPK++ + T
Sbjct: 137 MFIASAGKKTADKAVDLSKDDLLGDILQDLNTDVS-----QIAPPPVLIPKKKRSSGTLL 191
Query: 216 KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEP----VDD 271
+ + K I K ++KEP IK + E+ + ++E +D
Sbjct: 192 NPFSVHSPKAIPPGKPASPVLRKEPLLTPIPIKRAEFAGELSQPECPEDEQESGIMEFED 251
Query: 272 GLW-EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELST 330
G + E M+ ++ D T ++++ E E ++ ++ +K + +ES V
Sbjct: 252 GDFDEPMEAEEVDGEPVTARTWDQESEPE---ERVKHETDPKKGTTSFLESFLPDVSC-- 306
Query: 331 SPPPQVVEKKEHKCAEWEAIQTEPST---SEPQVHSRTADDSLPLATDHENKKVFRMFFL 387
W+ Q + S+ E QV S LPL ++++VF+ ++L
Sbjct: 307 ----------------WDMDQEDESSFLVQEVQVDST----HLPLVKGADDEQVFQFYWL 346
Query: 388 DAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKE 441
DA+ED Y QPG V+LFGKV+V+ +H SCCV+V+NI+R +Y LPR + +T
Sbjct: 347 DAYEDPYNQPGVVFLFGKVWVESAQTHVSCCVMVKNIERTLYFLPREMKIDLNTGKETTT 406
Query: 442 PVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
PV++ VY EFD IA +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+ P LP
Sbjct: 407 PVTMMDVYEEFDSTIAAKYKIMKFKSKTVEKNYAFEIPDVPEKSEYLEVRYSAEMPPLPQ 466
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKI 560
L G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK+E + + +
Sbjct: 467 HLKGETFSHVFGTNTSGLELFLMNRKIKGPCWLEVKNPQPLKQPISWCKFEAVALKPDLV 526
Query: 561 RITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ V + +T+ ++ ++E + + A S+ L
Sbjct: 527 NVIKDVSPPPLVVMSFSMKTMQNIKNHQHEIIAIAALVHHSFAL 570
>gi|354492235|ref|XP_003508255.1| PREDICTED: DNA polymerase alpha catalytic subunit isoform 1
[Cricetulus griseus]
Length = 1468
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/698 (51%), Positives = 477/698 (68%), Gaps = 29/698 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 772 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEVDG 831
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ L+
Sbjct: 832 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVALE 891
Query: 673 DSDITTLCEY------LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
+ TT E LP+ +D GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 892 VQNSTTEDEEQEQIPELPDPNLDMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 951
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 952 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1011
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + D VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1012 SIMINTNSTNLDEVFKLGNKVKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1071
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G I QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1072 DGNYITKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1126
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG +P++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1127 GENVLNGSIPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1186
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ ATQRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1187 CQDGSNLTATQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIALWL 1246
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGE-AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTR 1085
GLD++ +R ++++ + G + +E KY+ C+KF+ C P+C N +
Sbjct: 1247 GLDSTQFRVHQYHKDEETDALLGGPAQLTDEEKYKDCEKFKCPC--PTCGTENIYDNVFE 1304
Query: 1086 LSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
S + L C N +CK P T++ L NKL+ D+ I KYY+GWL CE+P C T
Sbjct: 1305 GSGIDLEPSLYRCSNVDCKASPLTFMVQLSNKLTMDIRHCIKKYYDGWLICEEPTCRSRT 1364
Query: 1146 RRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA---LTKSDTPSIK 1200
RR PL LC C K L Y++ LY QL F+ YI D+ A LT+ + +K
Sbjct: 1365 RRLPLHFSRNGPLCPVCMKAVLRPEYSDKSLYTQLCFYRYIFDVDCALEKLTEHEKDKLK 1424
Query: 1201 ---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
F + Y K+K E FL S Y+ V+L KLF+
Sbjct: 1425 KQFFTPKVLHDYKKIKNIAEHFLSWSGYSEVNLSKLFA 1462
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 206/603 (34%), Positives = 315/603 (52%), Gaps = 68/603 (11%)
Query: 25 STRARSACSSFCVGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENV 84
T A S SF RA+R+K K + A ++LK K G K+KYE +V
Sbjct: 12 GTSAVSDSGSFV-------ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSV 63
Query: 85 YEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKR 139
YEEV E++Y++ V RQ+DDWI DD G GYVEDGREIFDDD+ED + + R
Sbjct: 64 YEEVDEEQYSKLVQARQDDDWIVDDDGTGYVEDGREIFDDDLEDDALDTSGKGSDGKAHR 123
Query: 140 KKNKNIQNPNAK--GDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLN 197
K K+++ P+ +I+ + KK + V L+ DD+L D+L ++NT ++
Sbjct: 124 KDRKDVKKPSVTKPNNIKAMFIASAGKKTADKAVDLSKDDLLGDILQDLNTDVS-----Q 178
Query: 198 TKTNEIVIPKEEPPAPTA-KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEV 256
++IPK++ + T + + K I K ++KEP IK + E+
Sbjct: 179 IAPPPVLIPKKKRSSGTLLNPFSVHSPKAIPPGKPASPVLRKEPLLTPIPIKRAEFAGEL 238
Query: 257 EMNVAEQSKEEP----VDDGLW-EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIE 311
+ ++E +DG + E M+ ++ D T ++++ E E ++ ++
Sbjct: 239 SQPECPEDEQESGIMEFEDGDFDEPMEAEEVDGEPVTARTWDQESEPE---ERVKHETDP 295
Query: 312 EKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPST---SEPQVHSRTADD 368
+K + +ES V W+ Q + S+ E QV S
Sbjct: 296 KKGTTSFLESFLPDVSC------------------WDMDQEDESSFLVQEVQVDST---- 333
Query: 369 SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKI 428
LPL ++++VF+ ++LDA+ED Y QPG V+LFGKV+V+ +H SCCV+V+NI+R +
Sbjct: 334 HLPLVKGADDEQVFQFYWLDAYEDPYNQPGVVFLFGKVWVESAQTHVSCCVMVKNIERTL 393
Query: 429 YLLPRSEHL------KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVP 481
Y LPR + +T PV++ VY EFD IA +YKI+ FKS+ +EK YAF +P VP
Sbjct: 394 YFLPREMKIDLNTGKETTTPVTMMDVYEEFDSTIAAKYKIMKFKSKVLEKNYAFEIPDVP 453
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
+ SEYLEVRYSA+ P LP L G+TFSHVFGT +S LE L+ RKIKGP WLE +
Sbjct: 454 EKSEYLEVRYSAEMPPLPQHLKGETFSHVFGTNTSGLELFLMNRKIKGPCWLEVKNPQPL 513
Query: 542 PSRISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKS 594
ISWCK+E + + + + V + +T+ ++ ++E + + A S
Sbjct: 514 KQPISWCKFEAVALKPDLVNVIKDVSPPPLVVMSFSMKTMQNIKNHQHEIIAIAALVHHS 573
Query: 595 YVL 597
+ L
Sbjct: 574 FAL 576
>gi|345806837|ref|XP_537985.3| PREDICTED: DNA polymerase alpha catalytic subunit [Canis lupus
familiaris]
Length = 1461
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/701 (52%), Positives = 475/701 (67%), Gaps = 36/701 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEELDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ANK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 826 DANKYKKGRKKAAYAGGLVLDPKAGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
+T E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDIR
Sbjct: 886 TQKVTEDGEQEQIPELPDPGLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDIR 945
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 946 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 1005
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N D + V+K+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKY AL + S+
Sbjct: 1006 IMINTNSTDLEEVYKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYGALVVEPTSD 1065
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G QE+KG+D+VRRDW LA E G FVI QIL +QS D ++NI + + +I
Sbjct: 1066 GNYSTKQELKGLDIVRRDWCDLAKETGNFVIGQILSDQSR-----DTIVENIQKRLIEIG 1120
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+IC
Sbjct: 1121 ENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWMNSQGGRKMKAGDTVSYVIC 1180
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA LG
Sbjct: 1181 QDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLG 1240
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N ++
Sbjct: 1241 LDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYDS 1294
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
S V L C N +CK P T + L NKL D+ + I KYYEGWL CE+P C
Sbjct: 1295 VLDGSGTDVEPSLYRCSNIDCKASPLTSVVQLSNKLIMDIRRCIKKYYEGWLICEEPTCQ 1354
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
+ TRR PL LC C K L Y++ LY QL F+ YI D+ AL K T K
Sbjct: 1355 NRTRRLPLQFSRNGPLCQVCMKATLRPEYSDKSLYTQLCFYRYIFDVDCALEKLSTDQEK 1414
Query: 1201 ------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
F + Y K++ E+FL S Y+ V+L KLF+
Sbjct: 1415 DKLKKVFTLKVRQDYQKLRNTAEQFLSRSGYSEVNLSKLFA 1455
Score = 261 bits (666), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 201/583 (34%), Positives = 306/583 (52%), Gaps = 63/583 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
R++R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+DDW
Sbjct: 20 RSRREKKSKRGRQEALERLKRAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDDDW 78
Query: 106 IDDDGGDGYVEDGREIFDDDIEDV---PQKKEKHDKRK-------KNKNIQNPNAKGDIQ 155
I DD G GYVEDGREIFDDD+ED +K K DK + K + PN +I+
Sbjct: 79 IVDDDGIGYVEDGREIFDDDLEDDALDSHEKGKDDKARTKDRRNVKKAAVTKPN---NIK 135
Query: 156 KLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA 215
+ KK + V L+ DD+L D+L ++NT P I+IPK++ +
Sbjct: 136 SMFIASAGKKTTDKAVDLSKDDLLGDILQDLNTEKPPV-----TPPPIMIPKKKRSIGAS 190
Query: 216 KEYLANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVD 270
+ + K P+ ++ P P+K + + V + ++ E S +
Sbjct: 191 LNPFSVHTPKAVPSGKTASPVSRKEPPLTPVPVKCAEFAGEPVPALCIDDKEDSGAMDFE 250
Query: 271 DGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVEL 328
DG D+D + + DV P K Q E+ ++ ++ + D + L
Sbjct: 251 DG--------DFDEPMEAEEVDVEPVAVKTWHQ-ESEPAEGVKYEAD----PGKGTTSYL 297
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
+ P + C W+ Q + S+ Q + LPL + ++VF ++LD
Sbjct: 298 GSFLP-------DVSC--WDIDQEDDSSFSAQ-EVQVDSSHLPLVKGTDEEQVFHFYWLD 347
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEP 442
A+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T+
Sbjct: 348 AYEDQYSQPGVVFLFGKVWIESAKTHVSCCVMVKNIERTLYFLPREMKIDLNTGKETETL 407
Query: 443 VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
V++ VY EFD+ IA +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+ P LP D
Sbjct: 408 VTMKDVYDEFDEKIAAKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLPQD 467
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
L G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E + + +
Sbjct: 468 LKGETFSHVFGTNTSSLEMFLMNRKIKGPCWLEVKNPQLLNQPVSWCKVEAMALKPDLVN 527
Query: 562 ITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+ G V+S +T+ ++ ++E + + A S+ L
Sbjct: 528 VIKDIGPPPLVVMSFSMKTMQNAKTHQHEIIAVAALVHHSFAL 570
>gi|189237191|ref|XP_967510.2| PREDICTED: similar to DNA polymerase alpha 180kD CG6349-PA [Tribolium
castaneum]
gi|270008175|gb|EFA04623.1| DNA polymerase alpha 180kD [Tribolium castaneum]
Length = 1406
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/684 (53%), Positives = 481/684 (70%), Gaps = 41/684 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT + GNV+S+TLMGGRSERNEFLLLHAF EK+Y++PDK GK K GE+T
Sbjct: 736 LQITTIAGNVMSKTLMGGRSERNEFLLLHAFSEKNYIVPDKSSGK-KDFGEKTA------ 788
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
KKA YSGGLVL+PK GFYDKFI+LMDFNSLYPSIIQEYNICFTT+P + +D+ +
Sbjct: 789 -NKKATYSGGLVLDPKIGFYDKFILLMDFNSLYPSIIQEYNICFTTMPPNLAEDNMV--- 844
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
LP+ + G+LP+EIKKLVESRR VK LMK +LS D MQYDIRQ ALKLTANSMY
Sbjct: 845 ---LPDATLPAGVLPTEIKKLVESRRAVKKLMKSADLSPDQRMQYDIRQMALKLTANSMY 901
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLGF NSRF+A+ LAAL+T KGREIL NTK +VE LN+EVIYGDTDSLMI+ N+ D+D
Sbjct: 902 GCLGFANSRFYAKNLAALITHKGREILTNTKEVVERLNFEVIYGDTDSLMINTNLVDFDQ 961
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
V +IG +IK E NKLY+Q+ELDIDGV+KY+LLLKKKKYAA+++SK G++ E KG+
Sbjct: 962 VAQIGTKIKQEINKLYRQVELDIDGVFKYLLLLKKKKYAAVTLSKDKEGRLKTDIEYKGL 1021
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDWS+LA+EAGKFV++QIL +QS ++R NI H+ ++R DL G VPL+L
Sbjct: 1022 DIVRRDWSRLAAEAGKFVLNQILSDQSS-----ENRFLNILTHLSQLREDLQEGKVPLSL 1076
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
L ITKQL+K P++Y + LPHVQVA+R N + GDT+ Y+IC+DGT ATQRA
Sbjct: 1077 LVITKQLSKNPDQYPEDNTLPHVQVAIRYNKQGG-HYRAGDTVPYLICDDGTKNPATQRA 1135
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+IEELKN+ LKIDV YYL+ QIHPVV+R+ EPIE D V+I++CLG+D+S R ++K
Sbjct: 1136 YHIEELKNSETLKIDVTYYLANQIHPVVSRICEPIEALDLVQISDCLGVDSSNLR-KVKV 1194
Query: 1040 SIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECI 1099
+ EN++ E+K++ DKF F C+ C+ NTV+ P S + + VL +C
Sbjct: 1195 D-DDNGENVID----PEIKFRNVDKFVFKCL--VCESENTVDGP--FSNN--IPVLQKCQ 1243
Query: 1100 NPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL--C 1157
N CK P Y+P + N++++ +N YI K+Y + CEDP C T R PL R+ C
Sbjct: 1244 NARCKARPADYVPFIQNQMTETINSYIEKFYLNEMYCEDPMCCKETVRIPLSSSGRVPFC 1303
Query: 1158 TTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQHVE 1217
C+ L + Y+ L L+ Q+++F YI D+TK S PS++ E Y ++K+ VE
Sbjct: 1304 QVCNSV-LIKKYSGLSLFTQITYFQYIFDLTKL---SKMPSLELQVEK--AYHEIKETVE 1357
Query: 1218 RFLESSAYNIVDLKKLFS-CEEKQ 1240
R E ++ V ++ +F+ CE ++
Sbjct: 1358 RRYEFCGFSTVKMENMFAWCEHRK 1381
Score = 279 bits (714), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 324/582 (55%), Gaps = 72/582 (12%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
R KRQK D + K AF+K K LK G+++KYE ENVY+ V EKEYT++VL RQ+DDW
Sbjct: 9 RPKRQKRDSSYKAKAFEKFKQLKS-GLRNKYEVEELENVYDTVDEKEYTKKVLDRQDDDW 67
Query: 106 IDDDGGDGYVEDGREIFDDDIEDV---PQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMP 162
I DD G GYVEDGR+IFDDD++ +K+ K+ KN+ +G++Q L++NMP
Sbjct: 68 IVDDDGSGYVEDGRDIFDDDLDHASIAAASSKKNKGVKRKKNVAENAGRGNLQYLISNMP 127
Query: 163 VKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANF 222
KKKEE +L+ DD LA+LL E+N T P+E +K +NF
Sbjct: 128 --SKKKEEKKLDQDDDLAELLQEINET----------------PRE------SKAATSNF 163
Query: 223 SKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNV---AEQSKEEPVDDGLWEQMQI 279
S P+ V K+ EK ++ + +K + + + + + E++ +P ++ + + ++
Sbjct: 164 S-PLSV-KQAEKDYMRKLTSIKKPVITLSRTPKAKQPLKISTEENHAKPTEETILTENKL 221
Query: 280 DDWDNSQQTQDVLPEQAKVELQIEAIESQS---IEEKVDVTNVESVSSAVELSTSPPPQV 336
+ +++ QA E E E+QS ++ +D++ +E S E S PQ+
Sbjct: 222 EPEITQASCEEIAETQASCE---EVAETQSDGCFDDDLDLSQLEE--SEAEQSK---PQI 273
Query: 337 VEKKEHKCAEWEAIQTE-------PSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDA 389
EK++ WE I++E +E + + +D +PL ++K VFR F+ DA
Sbjct: 274 EEKQDL----WENIESEMLKEWSVSQDTETTIDLQNSD--IPLVK-IDDKSVFRFFWWDA 326
Query: 390 FEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVY 449
+ED + +PG V LFGK + + +H SC VI++NIDR+I+ LPR E K+K+PV+ VY
Sbjct: 327 YEDPFIKPGVVVLFGKTYHTQTKTHVSCTVIIRNIDRRIFFLPRVEEEKSKKPVTSQDVY 386
Query: 450 SEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSH 509
+E +++ I +FK+R + KKYAF+L VP S+Y+EVRY+A P + G TFS
Sbjct: 387 AEINELMKTKGIKNFKARPVTKKYAFDLE-VPSESDYVEVRYAATDPPIDKTTKGRTFSR 445
Query: 510 VFGTKSSFLENLLLERKIKGPSWLEF--PEAEKFPSRISWCKYEVQCNQMEKIRITN--- 564
VFG++SS+LE LL+RKIKGP WL P E PS +WCK +V C+++ + I
Sbjct: 446 VFGSESSYLEIFLLDRKIKGPCWLNIANPIPESNPS--TWCKLQVNCDKLTDVTICEEAI 503
Query: 565 -----VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ 601
V + R ++ NE ++L SY + DKQ
Sbjct: 504 EPPPLVVTALNMRRAFNPKTGLNEIVMLSLVTNVSYSV-DKQ 544
>gi|149042309|gb|EDL96016.1| rCG36239 [Rattus norvegicus]
Length = 1468
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/700 (51%), Positives = 478/700 (68%), Gaps = 34/700 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 773 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKPGDEDEEIDG 832
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 833 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 892
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ +D GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 893 TLKATEDEEQEQIPE-LPDPNLDMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 951
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 952 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1011
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1012 SIMINTNSTNLEEVFKLGNKVKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1071
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G I QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1072 DGNYITKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1126
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1127 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1186
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ ATQRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1187 CQDGSNLPATQRAYAPEQLQKQDNLAIDTQYYLAQQIHPVVARICEPIDGIDAVLIALWL 1246
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
GLD++ +R + + + E + L G A+ E KY+ C+KF+ C+ PSC N +
Sbjct: 1247 GLDSTQFR--VHQYHKDEENDALLGGPAQLTDEEKYKDCEKFK--CLCPSCGTENIYDNV 1302
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
S + L+ C N +CK P T++ L NKL D+ + I KYY+GWL CE+P C +
Sbjct: 1303 FEGSGMDMEPSLNRCSNIDCKASPATFMVQLSNKLIMDIRRCIKKYYDGWLMCEEPTCRN 1362
Query: 1144 LTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK---SDTPS 1198
RR PL LC C K L Y++ LY QL F+ YI D AL K +
Sbjct: 1363 RIRRLPLHFSRNGPLCPACMKAVLRPEYSDKSLYTQLCFYRYIFDADCALEKLPEHEKDK 1422
Query: 1199 IK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+K F Y K+K E FL S Y+ V+L KLF+
Sbjct: 1423 LKKQFFTPRVLQDYRKVKNIAEHFLSWSGYSEVNLSKLFA 1462
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 315/593 (53%), Gaps = 66/593 (11%)
Query: 38 GTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERV 97
G+ RA+R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V
Sbjct: 18 GSGSFVASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSVYEEVDEEQYSKLV 76
Query: 98 LKRQEDDWIDDDGGDGYVEDGREIFDDDIED-----VPQKKEKHDKRKKNKNIQNPNAK- 151
RQ+DDWI DD G GYVEDGREIFDDD+ED + + RK K+++ P+
Sbjct: 77 QARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDTCGEGSDGKAHRKDRKDVKKPSVTK 136
Query: 152 -GDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT---TIAPTLKLNTKTNEIVIPK 207
+I+ + KK + V L+ DD+L D+L ++NT IAP ++IPK
Sbjct: 137 PNNIKAMFIASAGKKTTDKTVDLSKDDLLGDILQDLNTETPQIAPP--------PVLIPK 188
Query: 208 EEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPS------PLKDEIKSNDSVMEVEMNVA 261
+ K P V+ P K S PL I + E+
Sbjct: 189 K-------KRSTGALPNPFSVDTPKAIPSGKPASLVLRNKPLLTPIPLKHAEFAGELAQP 241
Query: 262 EQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVES 321
E ++E + G+ E + D+D T++V E+ V +I ES+ +E + E+
Sbjct: 242 ECPEDEQ-ESGVIE-FEDGDFDEPMDTEEV-DEEEPVTAKIWDQESEPVEGVKHEADPET 298
Query: 322 VSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPST---SEPQVHSRTADDSLPLATDHEN 378
+++ S P + C W+ Q + ++ E QV S + LPL ++
Sbjct: 299 GTTSFLDSFLP--------DVSC--WDIDQKDENSFLLQEVQVDS----NHLPLVKGADD 344
Query: 379 KKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL- 437
++VF+ ++LDA+ED Y QPG V+LFGKV+V+ +H SCCV+V+NI+R +Y LPR +
Sbjct: 345 EQVFQFYWLDAYEDAYNQPGVVFLFGKVWVESAKTHVSCCVMVKNIERTLYFLPREMKID 404
Query: 438 -----KTKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY 491
+T P+++ VY EFD +I+ +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRY
Sbjct: 405 LNTGKETATPITMKDVYEEFDSKISAKYKIMKFKSKIVEKNYAFEIPDVPEKSEYLEVRY 464
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYE 551
SA+ P LP +L G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK+E
Sbjct: 465 SAEVPQLPQNLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKFE 524
Query: 552 VQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + V + +T+ ++ ++E + + A ++ L
Sbjct: 525 AMALKPDLVNVIKDVSPPPLVVMSFSMKTMQNVKNHQHEIIAMAALVHHNFPL 577
>gi|395518790|ref|XP_003763540.1| PREDICTED: DNA polymerase alpha catalytic subunit [Sarcophilus
harrisii]
Length = 1496
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/702 (51%), Positives = 480/702 (68%), Gaps = 36/702 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GNV+SRT+MGGRSERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 793 LQITNIAGNVMSRTMMGGRSERNEFLLLHAFYENNYIVPDKQNFRKPQQRLGDEDEDIDG 852
Query: 614 EANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ANK K GRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 853 DANKSKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 912
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
D IT E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDIR
Sbjct: 913 DQKITEDEEQENIPDLPDPDLEMGILPKEIRKLVERRKQVKQLMKQQDLNPDLVLQYDIR 972
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 973 QKALKLTANSMYGCLGFSFSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 1032
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + + VFK+GN++KSE N+LYK LE+DIDG++K +LLLKKKKYAAL + S+
Sbjct: 1033 IMINTNSTNLEEVFKLGNKVKSEVNRLYKMLEIDIDGIFKSLLLLKKKKYAALVVEPTSD 1092
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
GK I QE+KG+D+VRRDW LA E G FVI QIL +Q+ D + NI + + +I
Sbjct: 1093 GKYITKQELKGLDIVRRDWCDLAKETGNFVIGQILSDQNR-----DTIVDNIQKRLIEIG 1147
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
+ NG VP++ EI K LTK P++Y D+K+LPHV VA+ +N+ KK+K GDT+SYIIC
Sbjct: 1148 ESVMNGSVPISQFEINKALTKDPQDYPDKKSLPHVHVAIWINSHGGKKVKAGDTVSYIIC 1207
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ +A+QRAY E+L+ L ID YYLSQQ+HPVV R+ EPI+G DA IA LG
Sbjct: 1208 QDGSNLSASQRAYAPEQLQKQDNLTIDTQYYLSQQVHPVVARICEPIDGVDAALIATWLG 1267
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD + +R + + + EEN +LG G A+ E K++ C++F+F+C P C N ++
Sbjct: 1268 LDPTQFR--VHQHYHKDEENDALLG-GPAQLSDEEKFRDCERFKFSC--PKCGTENICDS 1322
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
S + L C N +C P T++ L NKL D+ +YI KYY GWL CE+P C
Sbjct: 1323 VFDGSGTQMEPSLFRCRNLDCDASPITFVIQLNNKLILDIRRYIKKYYNGWLICEEPTCQ 1382
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK------S 1194
TRR PL LC TC K L + Y++ LY QL F+ ++ D+ AL K
Sbjct: 1383 ARTRRLPLQFSRSGPLCQTCMKATLKQEYSDKSLYTQLCFYRHMFDMDHALEKLITDHEK 1442
Query: 1195 DTPSIKFDSETYM-GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
D +F S+ Y+ Y +K E+FL S Y+ V L KLFS
Sbjct: 1443 DKIKKEFLSKKYLEAYKILKSTAEKFLSWSGYSEVCLSKLFS 1484
Score = 269 bits (687), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 208/592 (35%), Positives = 306/592 (51%), Gaps = 83/592 (14%)
Query: 60 AFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGR 119
A ++LK K G K KYE +VY+EV E +Y+ V RQ+DDWI DD G GYVEDGR
Sbjct: 35 ALERLKKTKA-GEKFKYEVEDFTSVYDEVDEDQYSRMVQARQDDDWIVDDDGIGYVEDGR 93
Query: 120 EIFDDDIEDVP---QKKEKHDKRKKNKN------IQNPNAKGDIQKLLANMPVKKKKKEE 170
EIFD++++D KK K DK ++K + PN +I+ + KK +
Sbjct: 94 EIFDEELDDDAFDVSKKGKDDKAFQDKKNIRKAVVSKPN---NIKTMFMASAGKKTADKV 150
Query: 171 VQLNNDDVLADLLSEVNTTIA-----PTLKLNTKT---------------------NEIV 204
V L+ DD+L D+L ++N T + P +KL K N++
Sbjct: 151 VDLSKDDLLGDILQDLNATTSQITPPPVMKLKKKRPTGASLNPFSVQIPKATPLGKNDVS 210
Query: 205 IPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQS 264
+ ++E P TA ++ V +K++ L + N S +EV+ A +
Sbjct: 211 VSRKESPV-TAIHLKHDYMAKAGV-------VKQKDIELTQSMVVNSSPVEVQQEDASEG 262
Query: 265 KEEPVDDGLWEQ-----MQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNV 319
+E ++ ++ M +D D + +D E+A + ++ I+ + E K
Sbjct: 263 EETMKEEEEEQEEQKGLMDFEDGDFDEPMED---EEADIPPKVVKIQEKDKEPK------ 313
Query: 320 ESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENK 379
+SV + S P V C W+ I E +S + + LPL +
Sbjct: 314 KSVEPELSHLDSFFPDV------SC--WDKIDQEGESSIQTQEIQVDSNRLPLVKGTDGD 365
Query: 380 KVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH--L 437
+VF ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +YLLPR E L
Sbjct: 366 QVFLFYWLDAYEDQYNQPGVVFLFGKVWIEPAETHVSCCVLVKNIERTLYLLPREEQIDL 425
Query: 438 KTKE----PVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYS 492
T E PV++ VY EFD+ AT+YKI+ FKS+K+EK YAF +P VP+ SEYLEVRYS
Sbjct: 426 TTGEKKGIPVTMKDVYQEFDEKTATKYKIMKFKSKKVEKNYAFEIPDVPEKSEYLEVRYS 485
Query: 493 AKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
A+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E
Sbjct: 486 AELPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEIKNPQLLNQPISWCKVEA 545
Query: 553 QCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ E + + V + +T+ ++ +NE + L A S+ L
Sbjct: 546 MALKPELVNVVKDIAPPPLVIMSFSLKTMQNTKTHQNEVIALAALVHHSFPL 597
>gi|281604221|ref|NP_445931.1| DNA polymerase alpha catalytic subunit [Rattus norvegicus]
Length = 1468
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/700 (51%), Positives = 478/700 (68%), Gaps = 34/700 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 773 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKPGDEDEEIDG 832
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 833 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 892
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ +D GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 893 TLKATEDEEQEQIPE-LPDPNLDMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 951
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 952 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1011
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1012 SIMINTNSTNLEEVFKLGNKVKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1071
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G I QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1072 DGNYITKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1126
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1127 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1186
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ ATQRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1187 CQDGSNLPATQRAYAPEQLQKQDNLAIDTQYYLAQQIHPVVARICEPIDGIDAVLIALWL 1246
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
GLD++ +R + + + E + L G A+ E KY+ C+KF+ C+ PSC N +
Sbjct: 1247 GLDSTQFR--VHQYHKDEENDALLGGPAQLTDEEKYKDCEKFK--CLCPSCGTENIYDNV 1302
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
S + L+ C N +CK P T++ L NKL D+ + I KYY+GWL CE+P C +
Sbjct: 1303 FEGSGMDMEPSLNRCSNIDCKASPATFMVQLSNKLIMDIRRCIKKYYDGWLICEEPTCRN 1362
Query: 1144 LTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK---SDTPS 1198
RR PL LC C K L Y++ LY QL F+ YI D AL K +
Sbjct: 1363 RIRRLPLHFSRNGPLCPACMKAVLRPEYSDKSLYTQLCFYRYIFDADCALEKLPEHEKDK 1422
Query: 1199 IK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+K F Y K+K E FL S Y+ V+L KLF+
Sbjct: 1423 LKKQFFTPRVLQDYRKVKNIAEHFLSWSGYSEVNLSKLFA 1462
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 203/553 (36%), Positives = 303/553 (54%), Gaps = 66/553 (11%)
Query: 26 TRARSACSSFCVGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVY 85
T A S SF RA+R+K K + A ++LK K G K+KYE +VY
Sbjct: 13 TSAVSDSGSFV-------ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSVY 64
Query: 86 EEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIED-----VPQKKEKHDKRK 140
EEV E++Y++ V RQ+DDWI DD G GYVEDGREIFDDD+ED + + RK
Sbjct: 65 EEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDTCGEGSDGKAHRK 124
Query: 141 KNKNIQNPNAK--GDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT---TIAPTLK 195
K+++ P+ +I+ + KK + V L+ DD+L D+L ++NT IAP
Sbjct: 125 DRKDVKKPSVTKPNNIKAMFIASAGKKTTDKTVDLSKDDLLGDILQDLNTETPQIAPP-- 182
Query: 196 LNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSN 250
++IPK++ + + + KI P+ ++ P PLK
Sbjct: 183 ------PVLIPKKKRSTGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKR----- 231
Query: 251 DSVMEVEMNVAE-QSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQS 309
E ++A+ + E+ + G+ E + D+D T++V E+ V +I ES+
Sbjct: 232 ---AEFAGDLAQPECPEDEQESGVIE-FEDGDFDEPMDTEEV-DEEEPVTAKIWDQESEP 286
Query: 310 IEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPST---SEPQVHSRTA 366
+E + E+ +++ S P + C W+ Q + ++ E QV S
Sbjct: 287 VEGVKHEADPETGTTSFLDSFLP--------DVSC--WDIDQKDENSFLLQEVQVDS--- 333
Query: 367 DDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDR 426
+ LPL ++++VF+ ++LDA+ED Y QPG V+LFGKV+V+ +H SCCV+V+NI+R
Sbjct: 334 -NHLPLVKGADDEQVFQFYWLDAYEDPYNQPGVVFLFGKVWVESAKTHVSCCVMVKNIER 392
Query: 427 KIYLLPRSEHL------KTKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPG 479
+Y LPR + +T P+++ VY EFD +I+ +YKI+ FKS+ +EK YAF +P
Sbjct: 393 TLYFLPREMKIDLNTGKETATPITMKDVYEEFDSKISAKYKIMKFKSKIVEKNYAFEIPD 452
Query: 480 VPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
VP+ SEYLEVRYSA+ P LP +L G+TFSHVFGT +S LE L+ RKIKGP WLE +
Sbjct: 453 VPEKSEYLEVRYSAEVPQLPQNLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQ 512
Query: 540 KFPSRISWCKYEV 552
ISWCK+E
Sbjct: 513 LLNQPISWCKFEA 525
>gi|109130218|ref|XP_001091195.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Macaca
mulatta]
Length = 1462
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/703 (51%), Positives = 476/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 826 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 886 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 944
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 945 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1004
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + +S
Sbjct: 1005 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPMS 1064
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1065 DGNYATKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1119
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SYII
Sbjct: 1120 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYII 1179
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1180 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1239
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1240 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1293
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1294 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1353
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1354 GNRTRHLPLQFSRTGPLCPACMKATLRPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1413
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1414 KDKLKKQFFTPRVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1456
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 305/591 (51%), Gaps = 75/591 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD+ED + K+ + K +N++ P +I+
Sbjct: 77 DWIVDDDGIGYVEDGREIFDDDLEDDALDAGEKGKDGKARNKDKRNVKKPAVTKPNNIKS 136
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA- 215
+ KK + V L+ DD+L D+L ++NT P+ PP T
Sbjct: 137 MFIACAGKKTADKAVDLSKDDLLGDILQDLNTET---------------PQITPPPVTIL 181
Query: 216 --KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE--------QSK 265
K + P V P K SP+ + + + V + AE +S
Sbjct: 182 KKKRSIGASPNPFSVHTSTAIPSGKIASPVS---RKDPPLTPVPLKRAEFAGEPIQVEST 238
Query: 266 EEPVDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVS 323
EE + G E + D+D +T+ D+ P AK Q E+ ++ ++++ D
Sbjct: 239 EEEQESGAME-FEDGDFDEPMETEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD----SGKG 292
Query: 324 SAVELSTSPPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKK 380
+ +L P + C W+ Q + S E QV S LPL + ++
Sbjct: 293 TMSDLGRFLP-------DVSC--WDIDQEGDSSFSVQEVQVDS----SQLPLVKGADEEQ 339
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL--- 437
VF ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR +
Sbjct: 340 VFHFYWLDAYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLN 399
Query: 438 ---KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
+T PVS+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA
Sbjct: 400 TGKETGTPVSMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSA 459
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQ 553
+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E
Sbjct: 460 EIPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPISWCKVEAM 519
Query: 554 CNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + V +T+ ++ +NE + + A S+ L
Sbjct: 520 ALKPDLVNVIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAVAALVHHSFAL 570
>gi|355704674|gb|EHH30599.1| hypothetical protein EGK_20335 [Macaca mulatta]
Length = 1468
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/703 (51%), Positives = 476/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 772 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 831
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 832 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 891
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 892 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 950
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 951 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1010
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + +S
Sbjct: 1011 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPMS 1070
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1071 DGNYATKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1125
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SYII
Sbjct: 1126 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYII 1185
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1186 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1245
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1246 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1299
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1300 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1359
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1360 GNRTRHLPLQFSRTGPLCPACMKATLRPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1419
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1420 KDKLKKQFFTPRVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1462
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 305/591 (51%), Gaps = 75/591 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+D
Sbjct: 24 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDD 82
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD+ED + K+ + K +N++ P +I+
Sbjct: 83 DWIVDDDGIGYVEDGREIFDDDLEDDALDAGEKGKDGKARNKDKRNVKKPAVTKPNNIKS 142
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA- 215
+ KK + V L+ DD+L D+L ++NT P+ PP T
Sbjct: 143 MFIACAGKKTADKAVDLSKDDLLGDILQDLNTET---------------PQITPPPVTIL 187
Query: 216 --KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE--------QSK 265
K + P V P K SP+ + + + V + AE +S
Sbjct: 188 KKKRSIGASPNPFSVHTSTAIPSGKIASPVS---RKDPPLTPVPLKRAEFAGEPIQVEST 244
Query: 266 EEPVDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVS 323
EE + G E + D+D +T+ D+ P AK Q E+ ++ ++++ D
Sbjct: 245 EEEQESGAME-FEDGDFDEPMETEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD----SGKG 298
Query: 324 SAVELSTSPPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKK 380
+ +L P + C W+ Q + S E QV S LPL + ++
Sbjct: 299 TMSDLGRFLP-------DVSC--WDIDQEGDSSFSVQEVQVDS----SQLPLVKGADEEQ 345
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL--- 437
VF ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR +
Sbjct: 346 VFHFYWLDAYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLN 405
Query: 438 ---KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
+T PVS+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA
Sbjct: 406 TGKETGTPVSMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSA 465
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQ 553
+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E
Sbjct: 466 EIPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPISWCKVEAM 525
Query: 554 CNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + V +T+ ++ +NE + + A S+ L
Sbjct: 526 ALKPDLVNVIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAVAALVHHSFAL 576
>gi|301782577|ref|XP_002926706.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Ailuropoda
melanoleuca]
Length = 1461
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/701 (52%), Positives = 473/701 (67%), Gaps = 36/701 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEDIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ANK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 826 DANKYKKGRKKAAYAGGLVLDPKAGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
IT E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDIR
Sbjct: 886 TQKITEDGEQEQIPELPDPNLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDIR 945
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 946 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 1005
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N D + V+K+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKY AL + S+
Sbjct: 1006 IMINTNSTDLEEVYKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYGALVVEPTSD 1065
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G QE+KG+D+VRRDW LA E G FVI QIL +QS D ++NI + + +I
Sbjct: 1066 GNYSTKQELKGLDIVRRDWCDLAKETGNFVIGQILSDQSR-----DTIVENIQKRLIEIG 1120
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+IC
Sbjct: 1121 ENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWMNSQGGRKVKAGDTVSYVIC 1180
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA LG
Sbjct: 1181 QDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLG 1240
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD + +R + EEN +LG G A+ E KY+ C+KF+ C P+C N ++
Sbjct: 1241 LDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCEKFKCPC--PTCGTENIYDS 1294
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
S + L C N +CK P T++ L NKL DM + I KYYEGWL CE+P C
Sbjct: 1295 VLDGSGTDMEPSLYRCSNIDCKASPLTFMVQLSNKLIMDMRRCIKKYYEGWLICEEPTCR 1354
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
+ TRR PL LC C K L Y++ LY QL F+ YI D AL K T K
Sbjct: 1355 NRTRRLPLQFSRNGPLCQVCVKATLRPEYSDKSLYTQLCFYRYIFDADCALEKLITDHGK 1414
Query: 1201 ------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1415 DKWKKFFTPKVRQDYQKLKNTAEQFLSRSGYSEVNLSKLFA 1455
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 202/585 (34%), Positives = 309/585 (52%), Gaps = 63/585 (10%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRSRREKKSKRGRQEALERLKRAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDV---PQKKEKHDKRK-------KNKNIQNPNAKGD 153
DWI DD G GYVEDGREIFDDD+ED +K K DK + K + PN+
Sbjct: 77 DWIVDDDGIGYVEDGREIFDDDLEDDALDSHEKGKDDKARTKDRRNLKKAAVTKPNS--- 133
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
I+ + KK + V L+ DD+L D+L ++NT K ++IPK++
Sbjct: 134 IKSMFIASAGKKTADKAVDLSKDDLLGDILQDLNTE-----KPQITPPPVMIPKKKRSVG 188
Query: 214 TAKEYLANFSKPIKVEKKIEKPI-KKEPS----PLKDEIKSNDSVMEVEMNVAEQSKEEP 268
+ + + K P+ +KEP PLK + + V + ++ E S
Sbjct: 189 ASPNPFSVHTPKAVPSGKTASPVSRKEPPLTSVPLKRAEFAGEPVPALCIDDKEDSGAMD 248
Query: 269 VDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAV 326
+DG D+D + + DV P K Q E+ ++ ++ + D +
Sbjct: 249 FEDG--------DFDEPMEAEEVDVEPVAVKTWHQ-ESEPAEGVKHEAD----PGKGTTS 295
Query: 327 ELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFF 386
L + P + C W+ + + S+ Q + LPL + ++VF+ ++
Sbjct: 296 YLGSFLP-------DVSC--WDVDREDDSSFSAQ-EVQVDSSHLPLVKGTDEEQVFQFYW 345
Query: 387 LDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTK 440
LDA+ED Y QPG V+LFGKV+++ +H SCC++V+NI+R +Y LPR + +T+
Sbjct: 346 LDAYEDQYNQPGVVFLFGKVWIESAKTHVSCCLMVKNIERTLYFLPRETKIDLNTGKETE 405
Query: 441 EPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALP 499
PV++ VY EFD+ IA +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+ P LP
Sbjct: 406 TPVTMKDVYDEFDEKIAAKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLP 465
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEK 559
DL G+TFSHVFGT +S LE L+ RKI+GP WLE + +SWCK E + +
Sbjct: 466 QDLKGETFSHVFGTNTSSLEMFLMNRKIRGPCWLEVKNPQLLNHPVSWCKVEAMALKPDL 525
Query: 560 IRITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + G V+S +T+ ++ +NE + + A S+ L
Sbjct: 526 VNVIKDVGPPPLVVMSFSMKTMQNAKTHQNEIIAVAALVHHSFAL 570
>gi|383419303|gb|AFH32865.1| DNA polymerase alpha catalytic subunit [Macaca mulatta]
Length = 1465
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/703 (51%), Positives = 476/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 769 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 828
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 829 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 888
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 889 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 947
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 948 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1007
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + +S
Sbjct: 1008 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPMS 1067
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1068 DGNYATKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1122
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SYII
Sbjct: 1123 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYII 1182
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1183 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1242
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1243 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1296
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1297 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1356
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1357 GNRTRHLPLQFSRTGPLCPACMKATLRPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1416
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1417 KDKLKKQFFTPRVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1459
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 305/591 (51%), Gaps = 75/591 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+D
Sbjct: 21 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDD 79
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD+ED + K+ + K +N++ P +I+
Sbjct: 80 DWIVDDDGIGYVEDGREIFDDDLEDDALDAGEKGKDGKARNKDKRNVKKPAVTKPNNIKS 139
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA- 215
+ KK + V L+ DD+L D+L ++NT P+ PP T
Sbjct: 140 MFIACAGKKTADKAVDLSKDDLLGDILQDLNTET---------------PQITPPPVTIL 184
Query: 216 --KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE--------QSK 265
K + P V P K SP+ + + + V + AE +S
Sbjct: 185 KKKRSIGASPNPFSVHTSTAIPSGKIASPVS---RKDPPLTPVPLKRAEFAGEPIQVEST 241
Query: 266 EEPVDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVS 323
EE + G E + D+D +T+ D+ P AK Q E+ ++ ++++ D
Sbjct: 242 EEEQESGAME-FEDGDFDEPMETEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD----SGKG 295
Query: 324 SAVELSTSPPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKK 380
+ +L P + C W+ Q + S E QV S LPL + ++
Sbjct: 296 TMSDLGRFLP-------DVSC--WDIDQEGDSSFSVQEVQVDS----SQLPLVKGADEEQ 342
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL--- 437
VF ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR +
Sbjct: 343 VFHFYWLDAYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLN 402
Query: 438 ---KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
+T PVS+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA
Sbjct: 403 TGKETGTPVSMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSA 462
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQ 553
+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E
Sbjct: 463 EIPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPISWCKVEAM 522
Query: 554 CNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + V +T+ ++ +NE + + A S+ L
Sbjct: 523 ALKPDLVNVIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAVAALVHHSFAL 573
>gi|106507301|ref|NP_058633.2| DNA polymerase alpha catalytic subunit [Homo sapiens]
gi|60392197|sp|P09884.2|DPOLA_HUMAN RecName: Full=DNA polymerase alpha catalytic subunit; AltName:
Full=DNA polymerase alpha catalytic subunit p180
gi|30089008|gb|AAP13534.1| polymerase (DNA directed), alpha [Homo sapiens]
gi|119619434|gb|EAW99028.1| polymerase (DNA directed), alpha [Homo sapiens]
Length = 1462
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/703 (51%), Positives = 477/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 826 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 886 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 944
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 945 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1004
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1005 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1064
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1065 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1119
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1120 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1179
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1180 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1239
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1240 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1293
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1294 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1353
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1354 RNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1413
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1414 KDKLKKQFFTPKVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1456
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 205/582 (35%), Positives = 305/582 (52%), Gaps = 61/582 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 20 RARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDW 78
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLL 158
I DD G GYVEDGREIFDDD+ED ++ K K +N N K +I+ +
Sbjct: 79 IVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMF 138
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
KK + V L+ D +L D+L ++NT P + T +++ K+ + +
Sbjct: 139 IACAGKKTADKAVDLSKDGLLGDILQDLNTE-TPQI---TPPPVMILKKKRSIGASPNPF 194
Query: 219 LANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ + + KI P+ ++ P PLK + D +V +S EE + G
Sbjct: 195 SVHTATAVP-SGKIASPVSRKEPPLTPVPLKRAEFAGD-------DVQVESTEEEQESGA 246
Query: 274 WEQMQIDDWDNSQQTQDV-LPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSP 332
E + D+D + ++V L A E+ ++ ++++ D S V S
Sbjct: 247 ME-FEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEAD-----SGKGTVSYLGSF 300
Query: 333 PPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDA 389
P V C W+ Q + S E QV S LPL + ++VF ++LDA
Sbjct: 301 LPDV------SC--WDIDQEGDSSFSVQEVQVDS----SHLPLVKGADEEQVFHFYWLDA 348
Query: 390 FEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPV 443
+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P+
Sbjct: 349 YEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPI 408
Query: 444 SIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDL 502
S+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA+ P LP DL
Sbjct: 409 SMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQDL 468
Query: 503 SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E + + + +
Sbjct: 469 KGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVNV 528
Query: 563 TN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
V +T+ ++ +NE + + A S+ L
Sbjct: 529 IKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFAL 570
>gi|397497681|ref|XP_003819634.1| PREDICTED: DNA polymerase alpha catalytic subunit [Pan paniscus]
Length = 1462
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/703 (51%), Positives = 477/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 826 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 886 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 944
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 945 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1004
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1005 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1064
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1065 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1119
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1120 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1179
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1180 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1239
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1240 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1293
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1294 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1353
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1354 RNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1413
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1414 KDKLKKQFFTPKVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1456
Score = 270 bits (690), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 308/583 (52%), Gaps = 63/583 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 20 RARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDW 78
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLL 158
I DD G GYVEDGREIFDDD+ED ++ K K +N N K +I+ +
Sbjct: 79 IVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMF 138
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
KK + V L+ DD+L D+L ++NT P + T +++ K+ + +
Sbjct: 139 IACAGKKTADKAVDLSKDDLLGDILQDLNTE-TPQI---TPPPVMILKKKRSIGASPNPF 194
Query: 219 LANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ + + KI P+ ++ P PLK + D +V +S EE + G
Sbjct: 195 SVHTATAVP-SGKIASPVSRKEPPLTPVPLKRAEFAGD-------DVQVESTEEEQESGA 246
Query: 274 WEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
E + D+D + + D+ P AK Q E+ ++ ++++ D S + S
Sbjct: 247 ME-FEDGDFDEPMEVEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD-----SGKGTMSYLGS 299
Query: 332 PPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
P V C W+ Q + S E QV S LPL + ++VF ++LD
Sbjct: 300 FLPDV------SC--WDIDQEGDSSFSVQEVQVDS----SHLPLVKGADEEQVFHFYWLD 347
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEP 442
A+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P
Sbjct: 348 AYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTP 407
Query: 443 VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
+S+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA+ P LP D
Sbjct: 408 ISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQD 467
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
L G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E + + +
Sbjct: 468 LKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVN 527
Query: 562 ITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ V +T+ ++ +NE + + A S+ L
Sbjct: 528 VIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFAL 570
>gi|380797015|gb|AFE70383.1| DNA polymerase alpha catalytic subunit, partial [Macaca mulatta]
Length = 1438
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/703 (51%), Positives = 476/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 742 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 801
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 802 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 861
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 862 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 920
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 921 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 980
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + +S
Sbjct: 981 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPMS 1040
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1041 DGNYATKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1095
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SYII
Sbjct: 1096 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYII 1155
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1156 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1215
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1216 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1269
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1270 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1329
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1330 GNRTRHLPLQFSRTGPLCPACMKATLRPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1389
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1390 KDKLKKQFFTPRVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1432
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 206/584 (35%), Positives = 300/584 (51%), Gaps = 75/584 (12%)
Query: 51 KIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDG 110
K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDWI DD
Sbjct: 1 KKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDWIVDDD 59
Query: 111 GDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAK--GDIQKLLANMPV 163
G GYVEDGREIFDDD+ED + K+ + K +N++ P +I+ +
Sbjct: 60 GIGYVEDGREIFDDDLEDDALDAGEKGKDGKARNKDKRNVKKPAVTKPNNIKSMFIACAG 119
Query: 164 KKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA---KEYLA 220
KK + V L+ DD+L D+L ++NT P+ PP T K +
Sbjct: 120 KKTADKAVDLSKDDLLGDILQDLNTET---------------PQITPPPVTILKKKRSIG 164
Query: 221 NFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE--------QSKEEPVDDG 272
P V P K SP+ + + + V + AE +S EE + G
Sbjct: 165 ASPNPFSVHTSTAIPSGKIASPVS---RKDPPLTPVPLKRAEFAGEPIQVESTEEEQESG 221
Query: 273 LWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELST 330
E + D+D +T+ D+ P AK Q E+ ++ ++++ D + +L
Sbjct: 222 AME-FEDGDFDEPMETEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD----SGKGTMSDLGR 275
Query: 331 SPPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFL 387
P + C W+ Q + S E QV S LPL + ++VF ++L
Sbjct: 276 FLP-------DVSC--WDIDQEGDSSFSVQEVQVDS----SQLPLVKGADEEQVFHFYWL 322
Query: 388 DAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKE 441
DA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T
Sbjct: 323 DAYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGT 382
Query: 442 PVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
PVS+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA+ P LP
Sbjct: 383 PVSMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEIPQLPQ 442
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKI 560
DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E + + +
Sbjct: 443 DLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPISWCKVEAMALKPDLV 502
Query: 561 RITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ V +T+ ++ +NE + + A S+ L
Sbjct: 503 NVIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAVAALVHHSFAL 546
>gi|195498574|ref|XP_002096581.1| GE24967 [Drosophila yakuba]
gi|194182682|gb|EDW96293.1| GE24967 [Drosophila yakuba]
Length = 1492
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/689 (50%), Positives = 469/689 (68%), Gaps = 28/689 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKG- 618
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK+ +K+ EA
Sbjct: 791 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKKVPVSKRSAAGDAEATFSG 850
Query: 619 -----KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
+ +KKAAY+GGLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT+ + D
Sbjct: 851 ADATLQSKKKAAYAGGLVLEPLRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPVDAD 910
Query: 674 SDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKL 733
T LP+ + + GILP ++K+LVESR++VK LM P+LS +L MQY IRQ ALKL
Sbjct: 911 ELPT-----LPDSKTEAGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKL 965
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCN 793
TANSMYGCLGF +SRFFAQ LAALVT KGREIL +T+ LV+ LNY+V+YGDTDSLMI+ N
Sbjct: 966 TANSMYGCLGFAHSRFFAQHLAALVTHKGREILTSTQQLVQKLNYDVVYGDTDSLMINTN 1025
Query: 794 VNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICS 853
+ DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK S G +
Sbjct: 1026 ITDYDQVYKIGHSIKQSVNKLYKQLELDIDGVFGCLLLLKKKKYAAVKLSKDSKGNLRRE 1085
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
QE KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+T + G
Sbjct: 1086 QEHKGLDIVRRDWSQLAVMVGKAVLDEVLSEK-----PLEEKLDAVHAQLEKIKTQIAEG 1140
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
VPL L ITKQLT+ P+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT+
Sbjct: 1141 AVPLPLFVITKQLTRTPQEYANSASLPHVQVALRMNRERNRRYKKGDMVDYVICLDGTTN 1200
Query: 974 AATQRAYNIEELK--NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
AA QRAY+++ELK + KL++D NYYL QIHPVVTR++E +EGTDA RIAECLG+D +
Sbjct: 1201 AAMQRAYHLDELKASEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPT 1260
Query: 1032 LYRSQIKESIQQSEENILGVGEAEEV--KYQFCDKFEFTCMNPSCKQV-NTVEAPTRLST 1088
+R + + Q++ E G + Y+ C+ F F C+ +Q+ T P ++
Sbjct: 1261 KFRQNAQRTQQENTEQSEGESLLKTTLQLYRLCEPFRFQCVTCKAEQLMATAYRPGPSNS 1320
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRC 1148
H + VL +C NPEC+ P YL + N+L M +Y+ ++Y+ WL C+ P C+ TR
Sbjct: 1321 H--IAVLQQCANPECQTAPIQYLASVRNQLQLSMRRYVQRFYKNWLVCDHPDCNFNTRTH 1378
Query: 1149 PLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETY 1206
L K+ LC C L R YTE LY QL + ++ D+ K T P++ E
Sbjct: 1379 SLRKKSHRPLCQKCRSGSLLRQYTERDLYNQLCYLRFMFDLGKQ-TLHQKPTLT--PELE 1435
Query: 1207 MGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
Y + + V++ L+SS+Y I+ L KLF+
Sbjct: 1436 QAYQLLYETVDQQLQSSSYVIISLSKLFA 1464
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 293/599 (48%), Gaps = 77/599 (12%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RAKRQ++DK +FAA ++L+ LKG K + E ++VY+ V E+EY +R ++ DDW
Sbjct: 9 RAKRQRVDKNGRFAAMERLRQLKGTKNKCQVE-DQVDDVYDVVDEREYAKRAQEKYGDDW 67
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKN----------KNIQNP-NAKGDI 154
I++DG GY ED R+ F+D+ E ++E+ D +KK + + P K I
Sbjct: 68 IEEDGT-GYAEDLRDFFEDEDEYSDGEEERKDSKKKKGVAPNSKKRPRETEKPVTGKASI 126
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKE------ 208
+ L +N V KK + + +DD+LAD+L E+ A T + KT +++ P +
Sbjct: 127 KNLFSNA-VPKKIDVKNSVKDDDILADILGEIKEEPAAT---SEKTEKVIAPAKISVTSR 182
Query: 209 EPPAPTAKEYLANFSKPIKVEK----------------KIEKPIKKEPSPLKDEIKSNDS 252
+ A AKEY+ +F IKV++ +I KP P+ K S+ +
Sbjct: 183 KFDAAAAKEYMNSFLNNIKVQEQERKRAEASSDNEMLERILKPKAAVPN-TKVAFFSSPT 241
Query: 253 VMEVEMNVAEQSKEEPVDDGLWE-QMQIDDWDNSQQTQDVLPEQAKVEL-QIEAIESQSI 310
+ + E + + +D + +M D+ + DV Q K ++ Q +A +S
Sbjct: 242 IKKKEPAPEKTPAKTATEDAFSDNEMDFSCLDDDENQFDVEKTQFKEKISQTKASAEESS 301
Query: 311 EEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSL 370
+ KVD S E S E WE+I E V T D
Sbjct: 302 QAKVDGN--ASPKKETECSAKESASESEDISRLLNNWESICQMDDDFEKSV--LTTDQES 357
Query: 371 PLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYL 430
+++D + R ++ +A+ED K PG V+LFG+ S C+ VQNI+R +YL
Sbjct: 358 TISSDQQ----LRFWYWEAYEDPVKMPGEVFLFGRT-----ADGKSVCLRVQNINRVLYL 408
Query: 431 LPRSEHLK------TKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPG--VP 481
LPR L TK+ V++A +Y EFD ++A Q K+ F+SRK+ K +A + G VP
Sbjct: 409 LPRQFLLDPISKEPTKQKVTVADIYKEFDSEVANQLKLEFFRSRKVTKSFAHHAIGIEVP 468
Query: 482 DLSEYLEVRYSAK--CPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
+YLEV Y K P L ++ ++ +H+FG ++ LE LL+RKIKGP WL+ +
Sbjct: 469 QTCDYLEVHYDGKKPLPNLSANKKYNSIAHIFGATTNALERFLLDRKIKGPCWLQVTGFK 528
Query: 540 KFPSRISWCKYEVQCNQMEKIRITNVCG--------NVLS---RTLMGGRSERNEFLLL 587
P+ +SWC EV + + + + G +L+ RT M ++ RNE ++
Sbjct: 529 VNPAPMSWCNIEVTLTEPKNVELVQDRGKPAPPPPLTILALNVRTSMNPKTSRNEICMI 587
>gi|410335293|gb|JAA36593.1| polymerase (DNA directed), alpha 1, catalytic subunit [Pan
troglodytes]
Length = 1468
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/703 (51%), Positives = 476/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 772 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 831
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 832 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 891
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 892 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 950
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 951 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1010
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1011 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1070
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1071 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1125
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1126 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1185
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1186 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1245
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1246 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1299
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1300 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1359
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1360 RNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1419
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1420 KDKLKKQFFTPRVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1462
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 308/583 (52%), Gaps = 63/583 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 26 RARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDW 84
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLL 158
I DD G GYVEDGREIFDDD+ED ++ K K +N N K +I+ +
Sbjct: 85 IVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMF 144
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
KK + V L+ DD+L D+L ++NT P + T +++ K+ + +
Sbjct: 145 IACAGKKTADKAVDLSKDDLLGDILQDLNTE-TPQI---TPPPVMILKKKRSIGASPNPF 200
Query: 219 LANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ + + KI P+ ++ P PLK + D +V +S EE + G
Sbjct: 201 SVHTATAVP-SGKIASPVSRKEPPLTPVPLKRAEFAGD-------DVQVESTEEEQESGA 252
Query: 274 WEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
E + D+D + + D+ P AK Q E+ ++ ++++ D S + S
Sbjct: 253 ME-FEDGDFDEPMEVEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD-----SGKGTMSYLGS 305
Query: 332 PPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
P V C W+ Q + S E QV S LPL + ++VF ++LD
Sbjct: 306 FLPDV------SC--WDIDQEGDSSFSVQEVQVDS----SHLPLVKGADEEQVFHFYWLD 353
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEP 442
A+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P
Sbjct: 354 AYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTP 413
Query: 443 VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
+S+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA+ P LP D
Sbjct: 414 ISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQD 473
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
L G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E + + +
Sbjct: 474 LKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVN 533
Query: 562 ITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ V +T+ ++ +NE + + A S+ L
Sbjct: 534 VIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFAL 576
>gi|281350001|gb|EFB25585.1| hypothetical protein PANDA_016394 [Ailuropoda melanoleuca]
Length = 1459
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/701 (52%), Positives = 473/701 (67%), Gaps = 36/701 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 765 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEDIDG 824
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ANK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 825 DANKYKKGRKKAAYAGGLVLDPKAGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 884
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
IT E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDIR
Sbjct: 885 TQKITEDGEQEQIPELPDPNLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDIR 944
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 945 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 1004
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N D + V+K+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKY AL + S+
Sbjct: 1005 IMINTNSTDLEEVYKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYGALVVEPTSD 1064
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G QE+KG+D+VRRDW LA E G FVI QIL +QS D ++NI + + +I
Sbjct: 1065 GNYSTKQELKGLDIVRRDWCDLAKETGNFVIGQILSDQSR-----DTIVENIQKRLIEIG 1119
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+IC
Sbjct: 1120 ENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWMNSQGGRKVKAGDTVSYVIC 1179
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA LG
Sbjct: 1180 QDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLG 1239
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD + +R + EEN +LG G A+ E KY+ C+KF+ C P+C N ++
Sbjct: 1240 LDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCEKFKCPC--PTCGTENIYDS 1293
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
S + L C N +CK P T++ L NKL DM + I KYYEGWL CE+P C
Sbjct: 1294 VLDGSGTDMEPSLYRCSNIDCKASPLTFMVQLSNKLIMDMRRCIKKYYEGWLICEEPTCR 1353
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
+ TRR PL LC C K L Y++ LY QL F+ YI D AL K T K
Sbjct: 1354 NRTRRLPLQFSRNGPLCQVCVKATLRPEYSDKSLYTQLCFYRYIFDADCALEKLITDHGK 1413
Query: 1201 ------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1414 DKWKKFFTPKVRQDYQKLKNTAEQFLSRSGYSEVNLSKLFA 1454
Score = 266 bits (680), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 202/585 (34%), Positives = 309/585 (52%), Gaps = 63/585 (10%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 17 ASRSRREKKSKRGRQEALERLKRAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDD 75
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDV---PQKKEKHDKRK-------KNKNIQNPNAKGD 153
DWI DD G GYVEDGREIFDDD+ED +K K DK + K + PN+
Sbjct: 76 DWIVDDDGIGYVEDGREIFDDDLEDDALDSHEKGKDDKARTKDRRNLKKAAVTKPNS--- 132
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
I+ + KK + V L+ DD+L D+L ++NT K ++IPK++
Sbjct: 133 IKSMFIASAGKKTADKAVDLSKDDLLGDILQDLNTE-----KPQITPPPVMIPKKKRSVG 187
Query: 214 TAKEYLANFSKPIKVEKKIEKPI-KKEPS----PLKDEIKSNDSVMEVEMNVAEQSKEEP 268
+ + + K P+ +KEP PLK + + V + ++ E S
Sbjct: 188 ASPNPFSVHTPKAVPSGKTASPVSRKEPPLTSVPLKRAEFAGEPVPALCIDDKEDSGAMD 247
Query: 269 VDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAV 326
+DG D+D + + DV P K Q E+ ++ ++ + D +
Sbjct: 248 FEDG--------DFDEPMEAEEVDVEPVAVKTWHQ-ESEPAEGVKHEAD----PGKGTTS 294
Query: 327 ELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFF 386
L + P + C W+ + + S+ Q + LPL + ++VF+ ++
Sbjct: 295 YLGSFLP-------DVSC--WDVDREDDSSFSAQ-EVQVDSSHLPLVKGTDEEQVFQFYW 344
Query: 387 LDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTK 440
LDA+ED Y QPG V+LFGKV+++ +H SCC++V+NI+R +Y LPR + +T+
Sbjct: 345 LDAYEDQYNQPGVVFLFGKVWIESAKTHVSCCLMVKNIERTLYFLPRETKIDLNTGKETE 404
Query: 441 EPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALP 499
PV++ VY EFD+ IA +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+ P LP
Sbjct: 405 TPVTMKDVYDEFDEKIAAKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLP 464
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEK 559
DL G+TFSHVFGT +S LE L+ RKI+GP WLE + +SWCK E + +
Sbjct: 465 QDLKGETFSHVFGTNTSSLEMFLMNRKIRGPCWLEVKNPQLLNHPVSWCKVEAMALKPDL 524
Query: 560 IRITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + G V+S +T+ ++ +NE + + A S+ L
Sbjct: 525 VNVIKDVGPPPLVVMSFSMKTMQNAKTHQNEIIAVAALVHHSFAL 569
>gi|410291608|gb|JAA24404.1| polymerase (DNA directed), alpha 1, catalytic subunit [Pan
troglodytes]
Length = 1468
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/703 (51%), Positives = 476/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 772 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 831
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 832 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 891
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 892 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 950
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 951 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1010
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1011 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1070
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1071 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1125
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1126 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1185
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1186 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1245
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1246 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1299
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1300 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1359
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1360 RNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1419
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1420 KDKLKKQFFTPRVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1462
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 206/583 (35%), Positives = 307/583 (52%), Gaps = 63/583 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+ +K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 26 RARPKKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDW 84
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLL 158
I DD G GYVEDGREIFDDD+ED ++ K K +N N K +I+ +
Sbjct: 85 IVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMF 144
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
KK + V L+ DD+L D+L ++NT P + T +++ K+ + +
Sbjct: 145 IACAGKKTADKAVDLSKDDLLGDILQDLNTE-TPQI---TPPPVMILKKKRSIGASPNPF 200
Query: 219 LANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ + + KI P+ ++ P PLK + D +V +S EE + G
Sbjct: 201 SVHTATAVP-SGKIASPVSRKEPPLTPVPLKRAEFAGD-------DVQVESTEEEQESGA 252
Query: 274 WEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
E + D+D + + D+ P AK Q E+ ++ ++++ D S + S
Sbjct: 253 ME-FEDGDFDEPMEVEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD-----SGKGTMSYLGS 305
Query: 332 PPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
P V C W+ Q + S E QV S LPL + ++VF ++LD
Sbjct: 306 FLPDV------SC--WDIDQEGDSSFSVQEVQVDS----SHLPLVKGADEEQVFHFYWLD 353
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEP 442
A+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P
Sbjct: 354 AYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTP 413
Query: 443 VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
+S+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA+ P LP D
Sbjct: 414 ISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQD 473
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
L G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E + + +
Sbjct: 474 LKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVN 533
Query: 562 ITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ V +T+ ++ +NE + + A S+ L
Sbjct: 534 VIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFAL 576
>gi|355757246|gb|EHH60771.1| hypothetical protein EGM_18627 [Macaca fascicularis]
Length = 1468
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/703 (51%), Positives = 475/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 772 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 831
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 832 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 891
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 892 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 950
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 951 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1010
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S
Sbjct: 1011 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTS 1070
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1071 DGNYATKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1125
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SYII
Sbjct: 1126 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYII 1185
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1186 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1245
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1246 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1299
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1300 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1359
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1360 GNRTRHLPLQFSRTGPLCPACMKATLRPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1419
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1420 KDKLKKQFFTPRVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1462
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 304/591 (51%), Gaps = 75/591 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+D
Sbjct: 24 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDD 82
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD+ED + K+ + K +N++ P +I+
Sbjct: 83 DWIADDDGIGYVEDGREIFDDDLEDDALDAGEKGKDGKARNKDKRNVKKPAVTKPNNIKS 142
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA- 215
+ KK + V L+ DD+L D+L ++NT P+ PP T
Sbjct: 143 MFIACAGKKTADKAVDLSKDDLLGDILQDLNTET---------------PQITPPPVTIL 187
Query: 216 --KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE--------QSK 265
K + P V P K SP+ + + + + AE +S
Sbjct: 188 KKKRSIGASPNPFSVHTSTAVPSGKIASPVS---RKEPPLTPIPLKRAEFAGEPIQVEST 244
Query: 266 EEPVDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVS 323
EE + G E + D+D +T+ D+ P AK Q E+ ++ ++++ D
Sbjct: 245 EEEQESGAME-FEDGDFDEPMETEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD----SGKG 298
Query: 324 SAVELSTSPPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKK 380
+ +L P + C W+ Q + S E QV S LPL + ++
Sbjct: 299 TMSDLGRFLP-------DVSC--WDIDQEGDSSFSVQEVQVDS----SQLPLVKGADEEQ 345
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL--- 437
VF ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR +
Sbjct: 346 VFHFYWLDAYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLN 405
Query: 438 ---KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
+T PVS+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA
Sbjct: 406 TGKETGTPVSMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSA 465
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQ 553
+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E
Sbjct: 466 EIPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPISWCKVEAM 525
Query: 554 CNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + V +T+ ++ +NE + + A S+ L
Sbjct: 526 ALKPDLVNVIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAVAALVHHSFAL 576
>gi|297709603|ref|XP_002831517.1| PREDICTED: DNA polymerase alpha catalytic subunit [Pongo abelii]
Length = 1462
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/703 (51%), Positives = 479/703 (68%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ +K KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 826 DTSKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVSSE 885
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 886 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 944
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 945 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1004
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + +S
Sbjct: 1005 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPMS 1064
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1065 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKMLIEI 1119
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1120 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKGGDTVSYVI 1179
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ + L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1180 CQDGSNLTASQRAYAPEQLQKQNNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1239
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1240 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1293
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1294 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1353
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1354 RNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1413
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1414 KDKLKKQFFTPKVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1456
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 306/583 (52%), Gaps = 63/583 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 20 RARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDW 78
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLL 158
I DD G GYVEDGREIFDDD+ED ++ K K +N N K +I+ +
Sbjct: 79 IVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMF 138
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
KK + V L+ DD+L D+L ++NT AP + T +++ K+ + +
Sbjct: 139 IACAGKKTADKAVDLSKDDLLGDILQDLNTE-APQI---TPPPVMILKKKRSIGASPNPF 194
Query: 219 LANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ + + KI P+ ++ P PLK + D V + ++S +DG
Sbjct: 195 SVHTATAVP-SGKIASPVSRKEPPLTPVPLKRAEFAGDDVQVESIEEEQESGAMEFEDG- 252
Query: 274 WEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
D+D + + D+ P AK Q E+ ++ ++ + D S + S
Sbjct: 253 -------DFDEPMEAEEVDLEPMAAKAWDQ-ESEPAEEVKHEAD-----SGKGTMSYLGS 299
Query: 332 PPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
P V C W+ Q + S E QV S LPL + ++VF ++LD
Sbjct: 300 FLPDV------SC--WDIDQEGDSSFSVQEVQVDS----SHLPLVKGADEEQVFHFYWLD 347
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEP 442
A+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P
Sbjct: 348 AYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTP 407
Query: 443 VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
+S+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA+ P LP D
Sbjct: 408 ISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQD 467
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
L G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E + + +
Sbjct: 468 LKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPISWCKVEAMALKPDLVN 527
Query: 562 ITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ V +T+ ++ +NE + + A S+ L
Sbjct: 528 VIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAVAALVHHSFAL 570
>gi|449483061|ref|XP_004174992.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha catalytic
subunit [Taeniopygia guttata]
Length = 1750
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/700 (51%), Positives = 466/700 (66%), Gaps = 34/700 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK-----EGEETGE 614
++ITN+ GNV+SRT+MGGRSERNEFLLLHAFHEK Y++PDKQ K E E+ +
Sbjct: 1009 LQITNISGNVMSRTMMGGRSERNEFLLLHAFHEKDYIVPDKQVFKKPPQKLVDEDEDFED 1068
Query: 615 ANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
NK K G+KKAAY+GGLVLEPK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ R+ +
Sbjct: 1069 QNKSKIGKKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQ-RLSSE 1127
Query: 674 SD------ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
+ LP+ ++ GILP EI+KLVE RRQVK LMKQP+L+ DL +QYDIR
Sbjct: 1128 AQKRAETEEEEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLYLQYDIR 1187
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 1188 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYGDTDS 1247
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N D VFK+GN+IKSE NKLYK LE+DIDG++K +LLLKKKKYAALS+ +
Sbjct: 1248 IMINTNSTSLDEVFKLGNKIKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALSVEPTGD 1307
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
GK + QE+KG+D+VRRDW LA + G +VI QIL +Q D ++NI + +I
Sbjct: 1308 GKYVTKQELKGLDIVRRDWCDLAKQTGNYVIGQILSDQPR-----DIIVENIQRRLMEIG 1362
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ +G +P EI + LTK P++Y D+KALPHV VA+ +N+ +K+K GDT+SYIIC
Sbjct: 1363 ENVVSGQIPANQFEINRALTKDPQDYPDKKALPHVHVAMWINSHGGRKVKAGDTVSYIIC 1422
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG+ +A+QRAY E+LK LKID YYLSQQIHPVV R+ PIEG D+V IA LG
Sbjct: 1423 QDGSDLSASQRAYAPEQLKKQENLKIDNQYYLSQQIHPVVARICVPIEGIDSVLIATWLG 1482
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
LD S +R + + E + L G A+ E KY+ C++F+F C+ C N +
Sbjct: 1483 LDPSQFR--VHHHYHKDENDALVGGPAQLTDEEKYRDCERFKFCCLK--CGTENIYDNVF 1538
Query: 1085 RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
S + L C EC PP++Y+ + NKL D+ +Y+ KYY GWL CE+P C +
Sbjct: 1539 DGSGRFIEPSLLRCSKTECDEPPFSYVVQMNNKLLLDIRRYLRKYYSGWLICEEPTCQNR 1598
Query: 1145 TRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDT------ 1196
TRR PL +C C K L Y++ LY QL F+ YI D+ A+ K T
Sbjct: 1599 TRRLPLSFSRSGPVCQACRKAVLKPEYSDKALYTQLCFYRYIFDVDYAMDKVVTEEEKEY 1658
Query: 1197 -PSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ E Y ++K V++ L S Y+ V+L KLF+
Sbjct: 1659 LKKKQLRREVSEAYKRLKSTVDKCLSMSGYSEVNLGKLFT 1698
Score = 260 bits (664), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 203/600 (33%), Positives = 310/600 (51%), Gaps = 98/600 (16%)
Query: 60 AFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGR 119
A ++LK K G K KYE VY+E+ E EY++ V RQ+DDWI DD G GYVEDGR
Sbjct: 250 ALERLKKAKA-GEKLKYEVEEFTGVYDEIDEDEYSKMVRDRQDDDWIVDDDGIGYVEDGR 308
Query: 120 EIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLLANMPVKKKKKEEVQ 172
EIFD+D++D K + K I N K I+ + KK + V
Sbjct: 309 EIFDEDLDDDALISNKKGRGGKTSTIDKKNVKKSVVSKPNTIKSMFMASAGKKNTDKTVD 368
Query: 173 LNNDDVLADLLSEVNT-----TIAPTLKLNTK---------------TNEIVIP-KEEPP 211
L+ DD+L D+L +++ + P + L K T++++ P ++ P
Sbjct: 369 LSKDDLLGDILQDISAETVQLSPPPVIMLKRKRSAGVPLNPFSVQSQTSKVITPVSKKAP 428
Query: 212 APTAKEYL--ANF--------SKPIKV-EKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNV 260
A KE L A+F +K ++V E + K ++K P+++EI + V
Sbjct: 429 AHVRKETLPPASFHPKHPNYTAKSVRVSENEDTKHVQK---PIQNEI--------LVKAV 477
Query: 261 AEQSKEEPVDDGLWEQMQIDDWDNSQQTQDV--LPEQA---KVELQIEAIESQSIEEKVD 315
E++ ++ DD +D+D + + V +PE A K + +IE E++ +E +
Sbjct: 478 GEKATKD--DDQGMMHFDEEDFDEPMEAEHVETIPETAESLKKDSEIEKKETEQLESEKK 535
Query: 316 VTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAI---QTEPSTSEPQVHSRTADDSLPL 372
T+V +SS LS W+ I + + +T+E Q+ + LPL
Sbjct: 536 ETSV--LSSLPGLSC----------------WDRIDEDEADLATAEVQLDP----NLLPL 573
Query: 373 ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
+V R ++LDA+ED + QPG ++LFGKV+++ ++ SCCV V+NI+R +YLLP
Sbjct: 574 VNGESGDQVLRFYWLDAYEDQFSQPGVIFLFGKVWIESAATYVSCCVTVKNIERTVYLLP 633
Query: 433 RSEHL------KTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPGVPDLSE 485
R + +T+ PV+I V+ EF D I+ +YKI+ FKS+K+EK YAF +P VP SE
Sbjct: 634 RETEIDLSTGKETETPVTIMSVFKEFNDTISPKYKIMKFKSKKVEKYYAFEIPDVPAKSE 693
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI 545
YLEV+YSA+CP LP DL G TFSHVFGT +S LE LL+ +KIKGP WLE + +
Sbjct: 694 YLEVKYSAECPRLPQDLKGQTFSHVFGTNTSSLELLLMNQKIKGPCWLEIKNPQPSNPPV 753
Query: 546 SWCKYEVQCNQMEKIRITN--------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
SWCK E + + + V + +T ++ +NE + L A + + L
Sbjct: 754 SWCKVEAVAMKPGLVNVVKDLSPPPPLVVMSFSMKTTQNPKTHQNEVVALAALVHQKFPL 813
>gi|296235154|ref|XP_002762781.1| PREDICTED: DNA polymerase alpha catalytic subunit [Callithrix
jacchus]
Length = 1462
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/702 (51%), Positives = 474/702 (67%), Gaps = 37/702 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 826 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVAAE 885
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
IT E LP+ ++ GILP EI+KLVE R+QVK LMK +L+ DL++QYDIR
Sbjct: 886 AQKITEDGEQEQIPELPDPNLEMGILPREIRKLVERRKQVKQLMKLQDLNPDLMLQYDIR 945
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 946 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 1005
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S+
Sbjct: 1006 IMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTSD 1065
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
GK I QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1066 GKYITKQELKGLDIVRRDWCDLAKDTGSFVIGQILSDQSR-----DIIVENIQKRLIEIG 1120
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+IC
Sbjct: 1121 ENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVIC 1180
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA LG
Sbjct: 1181 QDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIAAWLG 1240
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1241 LDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCRC--PTCGTENIYDN 1294
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
S + L C N +C P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1295 VFDGSGTDMEPSLYRCSNIDCNASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTCR 1354
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
+ TR PL LC C K L Y++ LY QL F+ YI D+ AL K T K
Sbjct: 1355 NRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDVDCALEKLTTDHEK 1414
Query: 1201 -------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1415 DKLKKQIFTPKVMQEYRKLKNTAEQFLSRSGYSEVNLSKLFA 1456
Score = 265 bits (678), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 210/605 (34%), Positives = 306/605 (50%), Gaps = 103/605 (17%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K A +KLK K G K KYE +VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRARREKKSKKRCQEALEKLKKAKA-GEKCKYEVEDFTSVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAKG--DIQK 156
DWI DD G GYVEDGREIFDDD+ED + K+ + K +N++ P +I+
Sbjct: 77 DWIVDDDGIGYVEDGREIFDDDLEDDALDAGEKGKDGKARNKDKRNLKKPAVTKPKNIKS 136
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNT-----TIAPTLKLNTKTN---------- 201
+ KK + V L+ DD+L D+L ++NT T P + L +T+
Sbjct: 137 MFIACAGKKIADKAVDLSKDDLLGDILQDLNTETPQITPPPVMILKKRTSVGTSPNPFSV 196
Query: 202 ---------EIVIP--KEEPPAPTAKEYLANFS-KPIKVEKKIEKPIKKEPSPLKDEIKS 249
+I P ++EPP A F+ +P++ E E+ +E P++ E
Sbjct: 197 YTPTAVPSGKIAFPVSRKEPPLTPVPFKRAEFAGEPVQAESTEEE---QESGPMEFEDGD 253
Query: 250 NDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQS 309
D ME AE+ EPV W+Q E+ ++
Sbjct: 254 FDEPME-----AEEVDLEPVAAKTWDQ--------------------------ESEPAEE 282
Query: 310 IEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTA 366
++++VD + S P V C W+ Q + S E QV S
Sbjct: 283 VKQEVDPGK-----GTMSYLGSVFPDV------SC--WDVDQEGDSSFSVREVQVDS--- 326
Query: 367 DDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDR 426
LPL + ++VF ++LDA+ED Y QPG V++FGKV+++ +H SCCV+V+NI+R
Sbjct: 327 -SHLPLVKGADEEQVFHFYWLDAYEDQYNQPGVVFMFGKVWIESAQTHVSCCVMVKNIER 385
Query: 427 KIYLLPRSEHL------KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPG 479
+Y LPR + +T PVS+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P
Sbjct: 386 TLYFLPREMKIDLNTGKETGTPVSMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPD 445
Query: 480 VPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
VP+ SEYLEV+YSA+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE +
Sbjct: 446 VPEKSEYLEVKYSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQ 505
Query: 540 KFPSRISWCKYEVQCNQMEKIRITNVCG-------NVLSRTLMGGRSERNEFLLLHAFHE 592
ISWCK E + + + + G +T+ ++ +NE + + A
Sbjct: 506 LLNQPISWCKVEAMALKPDLVNVIKDVGPPPLVMMAFSMKTMQNAKNHQNEIIAIAALVH 565
Query: 593 KSYVL 597
++ L
Sbjct: 566 HNFAL 570
>gi|171846445|gb|AAI61721.1| LOC398200 protein [Xenopus laevis]
Length = 1458
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/695 (51%), Positives = 464/695 (66%), Gaps = 29/695 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE-----GEETG- 613
++ITN+ GNV+SRTLMGGRSERNE+LLLHAF E ++++PDK K ++ ++ G
Sbjct: 766 LQITNIAGNVMSRTLMGGRSERNEYLLLHAFTENNFIVPDKPVFKKMQQTTVEDNDDMGT 825
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRML 671
+ NK K RKKAAY+GGLVLEPK GFYDKFI+L+DFNSLYPSIIQEYNICFTT+
Sbjct: 826 DQNKNKSRKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEYNICFTTVHREAPST 885
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
Q + LP ++ GILP EI+KLVE RR VK LMKQP+L+ DL +QYDIRQKAL
Sbjct: 886 QKGEDQDEIPELPHSDLEMGILPREIRKLVERRRHVKQLMKQPDLNPDLYLQYDIRQKAL 945
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLGF SRF+A+PLAALVT +GREILL+TK +V+ +N EVIYGDTDS+MI+
Sbjct: 946 KLTANSMYGCLGFSYSRFYAKPLAALVTHQGREILLHTKEMVQKMNLEVIYGDTDSIMIN 1005
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
N N+ + VFK+GN++KSE NK YK LE+DIDG++K +LLLKKKKYAAL++ +GK +
Sbjct: 1006 TNCNNLEEVFKLGNRVKSEINKSYKLLEIDIDGIFKSLLLLKKKKYAALTVEPTGDGKYV 1065
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
QE+KG+D+VRRDW +LA +AG +VISQIL +Q D ++NI + + +I ++
Sbjct: 1066 TKQELKGLDIVRRDWCELAKQAGNYVISQILSDQPR-----DSIVENIQKKLTEIGENVT 1120
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
NG VP+T EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDTISY+IC+DG+
Sbjct: 1121 NGTVPITQYEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTISYVICQDGS 1180
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
+ +A+QRAY E+L+ L ID YYLSQQ+HPVV R+ EPI+G D+ IA LGLD S
Sbjct: 1181 NLSASQRAYAQEQLQKQENLSIDTQYYLSQQVHPVVARICEPIDGIDSALIAMWLGLDPS 1240
Query: 1032 LYRSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
+R+ QQ EEN +G +E KY+ C++F+F C P C N + S
Sbjct: 1241 QFRAH--RHYQQDEENDALLGGPSQLTDEEKYRDCERFKFFC--PKCGTENIYDNVFDGS 1296
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
+ L C PEC P Y+ + NKL D+ +YI KYY GWL CE+ C + TRR
Sbjct: 1297 GLQIEPGLKRCSKPECDASPLDYVIQVHNKLLLDIRRYIKKYYSGWLVCEEKTCQNRTRR 1356
Query: 1148 CPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS------I 1199
PL +C C K L Y E LY QL F+ +I D AL K +
Sbjct: 1357 LPLSFSRNGPICQACSKATLRSEYPEKALYTQLCFYRFILDWDYALEKVVSEQERGHLKK 1416
Query: 1200 KFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
K E+ Y K+K V++ L S Y+ V+L KLF
Sbjct: 1417 KLFQESENQYKKLKSTVDQVLSRSGYSEVNLSKLF 1451
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 219/594 (36%), Positives = 321/594 (54%), Gaps = 72/594 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K +K+ + A ++LK K G K KYE ++YEEV E EY++ V RQ+D
Sbjct: 9 ASRSRREKTEKSGRKEALERLKRAKA-GEKVKYEVEQVSSIYEEVDEAEYSKLVRDRQDD 67
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-------QKKEKHDKRK-KNKNIQNPNAKGDIQ 155
DWI DD G GYVEDGREIFDDD+ED K DK K ++ PN +I+
Sbjct: 68 DWIVDDDGTGYVEDGREIFDDDLEDNALADSGKGAKGAPKDKTNVKKSSVSKPN---NIK 124
Query: 156 KLLANMPVKKKKKEEVQLNNDDVLADLLS-----EVNTTIAPTLKLNTK------TNEIV 204
+ VKK + V L+ DD+L DLL V T P + L K N
Sbjct: 125 SMFMASAVKKTTDKAVDLSKDDLLGDLLQDLKSQAVPITPPPVITLKKKKLAGSPLNPFS 184
Query: 205 IPKEEPPA-PTAKEYLANFSKP----IKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMN 259
+P P PT+ + L +KP + + + + IKKEP + I S ++VE
Sbjct: 185 VPPTAPKVLPTSVKRLPAVTKPGHPAAQSKASVPRQIKKEPK--AELISSAVGPLKVEAQ 242
Query: 260 VAEQ-SKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTN 318
V E+ S DDG +++ +D + + + QA+ I+ ++ ++I+E+
Sbjct: 243 VKEEDSGMVEFDDGDFDEPMEEDVEITPVDSSTIKTQAQ---SIKCVKEENIKEEKS--- 296
Query: 319 VESVSSAVELSTSPPPQVVEKKEHKCAEWEAI-QTEPSTSEPQVHSRTADDSLPLATDHE 377
S ++ L+ S C W+ I + EP T+E QV S LPL T +
Sbjct: 297 --SFITSATLNES------------C--WDQIDEAEPMTTEIQVDS----SHLPLVTGAD 336
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
+VFR ++LDA+ED Y QPG VYLFGKV+++ +++ SCCV V+NI+R +YLLPR +
Sbjct: 337 GSQVFRFYWLDAYEDQYSQPGVVYLFGKVWIESADAYVSCCVSVKNIERTVYLLPRENRV 396
Query: 438 K------TKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
+ T PVS+ VY EF++ +A +YKI+ FKS+K++K YAF +P VP SEYLEVR
Sbjct: 397 QLSTGKDTGVPVSMMHVYQEFNEAVAEKYKIMKFKSKKVDKDYAFEIPDVPASSEYLEVR 456
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKY 550
YSA P LP DL G+TFSHVFGT +S LE LL RKIKGPSWLE + +SWCK
Sbjct: 457 YSADSPQLPQDLKGETFSHVFGTNTSSLELFLLSRKIKGPSWLEIKSPQLSSQPMSWCKV 516
Query: 551 EVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
E + +++ + V ++ +T+ ++ +NE + + A ++ L
Sbjct: 517 EAVVTRPDQVSVVKDLAPPPVVVLSLSMKTVQNAKTHQNEIVAIAALVHHTFPL 570
>gi|35568|emb|CAA29920.1| unnamed protein product [Homo sapiens]
Length = 1462
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/703 (51%), Positives = 476/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKK AY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 826 DTNKYKKGRKKGAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 886 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 944
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 945 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1004
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1005 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1064
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1065 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1119
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1120 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1179
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1180 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1239
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1240 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1293
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1294 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1353
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1354 RNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1413
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1414 KDKLKKQFFTPKVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1456
Score = 269 bits (687), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 205/582 (35%), Positives = 306/582 (52%), Gaps = 61/582 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 20 RARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDW 78
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLL 158
I DD G GYVEDGREIFDDD+ED ++ K K +N N K +I+ +
Sbjct: 79 IVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMF 138
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
KK + V L+ D +L D+L ++NT P + T +++ K+ + +
Sbjct: 139 IACAGKKTADKAVDLSKDGLLGDILQDLNTE-TPQI---TPPPVMILKKKRSIGASPNPF 194
Query: 219 LANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ + + KI P+ ++ P PLK + D +V +S EE + G
Sbjct: 195 SVHTATAVP-SGKIASPVSRKEPPLTPVPLKRAEFAGD-------DVQVESTEEEQESGA 246
Query: 274 WEQMQIDDWDNSQQTQDV-LPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSP 332
E + D+D + ++V L A E+ ++ ++++ D S V S
Sbjct: 247 ME-FEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEAD-----SGKGTVSYLGSF 300
Query: 333 PPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDA 389
P V C W+ Q + S E QV S LPL + ++VF ++LDA
Sbjct: 301 LPDV------SC--WDIDQEGDSSFSVQEVQVDS----SHLPLVKGADEEQVFHFYWLDA 348
Query: 390 FEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPV 443
+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P+
Sbjct: 349 YEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPI 408
Query: 444 SIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDL 502
S+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA+ P LP DL
Sbjct: 409 SMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQDL 468
Query: 503 SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
G+TFSHVFGT +S LE L+ RKIKGP WLE ++ +SWCK E + + + +
Sbjct: 469 KGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKKSTALNQPVSWCKVEAMALKPDLVNV 528
Query: 563 TN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
V +T+ ++ +NE + + A S+ L
Sbjct: 529 IKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFAL 570
>gi|449282368|gb|EMC89212.1| DNA polymerase alpha catalytic subunit, partial [Columba livia]
Length = 1461
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/702 (51%), Positives = 474/702 (67%), Gaps = 37/702 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-----KEGEETGE 614
++ITN+ GNV+SRT+MGGRSERNEFLLLHAF+EK Y++PDKQ K E E+ +
Sbjct: 756 LQITNISGNVMSRTMMGGRSERNEFLLLHAFYEKDYIVPDKQVFKKPLQKLVDEDEDFED 815
Query: 615 ANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
NK K G+KKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ R+ +
Sbjct: 816 QNKSKIGKKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQ-RLSSE 874
Query: 674 SD------ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
+ LP+ ++ GILP EI+KLVE RRQVK LMKQP+L+ DL +QYDIR
Sbjct: 875 AQKRAEVNEEEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLYLQYDIR 934
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 935 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYGDTDS 994
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + D VFK+GN+IKSE NKLYK LE+DIDGV+K +LLLKKKKYAAL++ +
Sbjct: 995 IMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALTVEPTGD 1054
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
GK + QE+KG+D+VRRDW LA E G ++ISQIL +Q D ++NI + +I
Sbjct: 1055 GKYVTKQELKGLDIVRRDWCDLAKETGNYIISQILSDQPR-----DIIVENIQRRLIEIG 1109
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG +P+ EI K LTK P++Y D+K+LPHV VA+ +N+ +K+K GDT+SYIIC
Sbjct: 1110 ENVINGQIPVNQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKAGDTVSYIIC 1169
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG+ +A+QRAY E+L+ L ID YYLSQQIHPVV R+ EPIEG D+V IA LG
Sbjct: 1170 QDGSDLSASQRAYAPEQLQKQGNLTIDTQYYLSQQIHPVVARICEPIEGIDSVLIATWLG 1229
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD S +R + + EEN +LG G A+ E KY+ C++F+F C P C N +
Sbjct: 1230 LDPSQFR--VHHHYHKDEENDALLG-GPAQLTDEEKYRDCERFKFCC--PKCGTENIYDN 1284
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
S + L C EC+ P+ ++ + NKL D+ ++I KYY GWL CE+P C
Sbjct: 1285 VFDGSGRFLEPSLQRCSKTECEESPFNHVVQMNNKLLLDIRRFIRKYYHGWLICEEPTCQ 1344
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDI----TKALTKSDT 1196
+ TRR PL +C C K L Y++ LY QL F+ YI D+ K +T+ +
Sbjct: 1345 NRTRRVPLHFSRSGPVCQACRKAVLRPEYSDKALYTQLCFYRYIFDLDYAKDKVITEEEK 1404
Query: 1197 PSIK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K +E Y K+K V+++L S Y+ V+L KLF+
Sbjct: 1405 KYFKKQPLRNEVSEAYKKLKSTVDQYLSMSGYSEVNLGKLFT 1446
Score = 246 bits (628), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 195/538 (36%), Positives = 277/538 (51%), Gaps = 92/538 (17%)
Query: 71 GVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVP 130
G K KYE VY+E+ E+EY++RV +RQ+DDWI DD G GYVEDGREIFD+D++D
Sbjct: 6 GEKIKYEVEEFTGVYDEIDEEEYSKRVRERQDDDWIVDDDGIGYVEDGREIFDEDLDDDA 65
Query: 131 QKKEKH---------DKRKKNKNI-QNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLA 180
K DK+ K++ PN I+ + KK + V L+ DD+L
Sbjct: 66 LGSNKKGKGGKISTVDKKNVKKSVVSKPNT---IKSMFIASAGKKSTDKTVDLSKDDLLG 122
Query: 181 DLLSEVNTTIAP-------TLK----LNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVE 229
D+L ++N P TLK N + + P A T +
Sbjct: 123 DILQDLNAETVPISPPPIITLKRKRSAGVPLNPFSVQSQNPKAITP------------IS 170
Query: 230 KKIEKPIKKEPSPL------------KDEIKSNDSVMEVEMNVAEQS------KEEPVDD 271
KK ++KE P K I S + ++ E +E+ ++D
Sbjct: 171 KKAPAHLRKEAVPAASFHPKHPNYTAKSAIDSENEDIKYVQKATENGGTVKTIEEKAIED 230
Query: 272 GLWEQMQID--DWDNSQQTQDV--LPEQA---KVELQIEAIESQSIEEKVDVTNVESVSS 324
M D D+D + + V +PE A K + +IE E++ +E + T++
Sbjct: 231 DDQGMMDFDEEDFDEPMEAKHVETVPETAESLKRDKEIEKKETEQLESEKKETSL----- 285
Query: 325 AVELSTSPPPQVVEKKEHKCAEWEAIQTEPS---TSEPQVHSRTADDSLPLATDHENKKV 381
LS S P + C W+ I + + +E Q+ D LPL + +V
Sbjct: 286 ---LSCSLP-------DISC--WDRIDEDEADLVVAEVQLDP----DLLPLVNGENDDQV 329
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL---- 437
R ++LDA+ED Y QPG V+LFGKV+++ N++ SCCV V+NI+R +YLLPR
Sbjct: 330 LRFYWLDAYEDQYSQPGVVFLFGKVWIESANTYVSCCVTVKNIERTVYLLPRETEFDLST 389
Query: 438 --KTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAK 494
+T+ PV+I V+ EF D I+ +YKI+ FKS+K+EK YAF +P +P SEYLEV+YSA+
Sbjct: 390 GKETETPVTIMSVFKEFNDCISPKYKIMKFKSKKVEKYYAFEIPDIPAKSEYLEVKYSAE 449
Query: 495 CPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
CP LP DL G TFSH+FGT +S LE LLL RKIKGP WLE + +SWCK E
Sbjct: 450 CPRLPQDLKGQTFSHIFGTNTSSLELLLLSRKIKGPCWLEIKNPQPSSQSVSWCKVEA 507
>gi|147903805|ref|NP_001082055.1| DNA polymerase alpha catalytic subunit [Xenopus laevis]
gi|45476976|sp|Q9DE46.1|DPOLA_XENLA RecName: Full=DNA polymerase alpha catalytic subunit; AltName:
Full=DNA polymerase alpha catalytic subunit p180
gi|11493738|gb|AAG35630.1|AF202992_1 DNA polymerase alpha [Xenopus laevis]
Length = 1458
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/695 (51%), Positives = 464/695 (66%), Gaps = 29/695 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE-----GEETG- 613
++ITN+ GNV+SRTLMGGRSERNE+LLLHAF E ++++PDK K ++ ++ G
Sbjct: 766 LQITNIAGNVMSRTLMGGRSERNEYLLLHAFTENNFIVPDKPVFKKMQQTTVEDNDDMGT 825
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRML 671
+ NK K RKKAAY+GGLVLEPK GFYDKFI+L+DFNSLYPSIIQEYNICFTT+
Sbjct: 826 DQNKNKSRKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEYNICFTTVHREAPST 885
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
Q + LP ++ GILP EI+KLVE RR VK LMKQP+L+ DL +QYDIRQKAL
Sbjct: 886 QKGEDQDEIPELPHSDLEMGILPREIRKLVERRRHVKQLMKQPDLNPDLYLQYDIRQKAL 945
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLGF SRF+A+PLAALVT +GREILL+TK +V+ +N EVIYGDTDS+MI+
Sbjct: 946 KLTANSMYGCLGFSYSRFYAKPLAALVTHQGREILLHTKEMVQKMNLEVIYGDTDSIMIN 1005
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
N N+ + VFK+GN++KSE NK YK LE+DIDG++K +LLLKKKKYAAL++ +GK +
Sbjct: 1006 TNCNNLEEVFKLGNRVKSEINKSYKLLEIDIDGIFKSLLLLKKKKYAALTVEPTGDGKYV 1065
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
QE+KG+D+VRRDW +LA +AG +VISQIL +Q D ++NI + + +I ++
Sbjct: 1066 TKQELKGLDIVRRDWCELAKQAGNYVISQILSDQPR-----DSIVENIQKKLTEIGENVT 1120
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
NG VP+T EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDTISY+IC+DG+
Sbjct: 1121 NGTVPITQYEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTISYVICQDGS 1180
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
+ +A+QRAY E+L+ L ID YYLSQQ+HPVV R+ EPI+G D+ IA LGLD S
Sbjct: 1181 NLSASQRAYAQEQLQKQENLSIDTQYYLSQQVHPVVARICEPIDGIDSALIAMWLGLDPS 1240
Query: 1032 LYRSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
+R+ QQ EEN +G +E KY+ C++F+F C P C N + S
Sbjct: 1241 QFRAH--RHYQQDEENDALLGGPSQLTDEEKYRDCERFKFFC--PKCGTENIYDNVFDGS 1296
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
+ L C PEC P Y+ + NKL D+ +YI KYY GWL CE+ C + TRR
Sbjct: 1297 GLQIEPGLKRCSKPECDASPLDYVIQVHNKLLLDIRRYIKKYYSGWLVCEEKTCQNRTRR 1356
Query: 1148 CPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS------I 1199
PL +C C K L Y E LY QL F+ +I D AL K +
Sbjct: 1357 LPLSFSRNGPICQACSKATLRSEYPEKALYTQLCFYRFIFDWDYALEKVVSEQERGHLKK 1416
Query: 1200 KFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
K E+ Y K+K V++ L S Y+ V+L KLF
Sbjct: 1417 KLFQESENQYKKLKSTVDQVLSRSGYSEVNLSKLF 1451
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 219/594 (36%), Positives = 321/594 (54%), Gaps = 72/594 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K +K+ + A ++LK K G K KYE ++YEEV E EY++ V RQ+D
Sbjct: 9 ASRSRREKTEKSGRKEALERLKRAKA-GEKVKYEVEQVSSIYEEVDEAEYSKLVRDRQDD 67
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-------QKKEKHDKRK-KNKNIQNPNAKGDIQ 155
DWI DD G GYVEDGREIFDDD+ED K DK K ++ PN +I+
Sbjct: 68 DWIVDDDGTGYVEDGREIFDDDLEDNALADSGKGAKGAPKDKTNVKKSSVSKPN---NIK 124
Query: 156 KLLANMPVKKKKKEEVQLNNDDVLADLLS-----EVNTTIAPTLKLNTK------TNEIV 204
+ VKK + V L+ DD+L DLL V T P + L K N
Sbjct: 125 SMFMASAVKKTTDKAVDLSKDDLLGDLLQDLKSQAVPITPPPVITLKKKKLAGSPLNPFS 184
Query: 205 IPKEEPPA-PTAKEYLANFSKP----IKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMN 259
+P P PT+ + L +KP + + + + IKKEP + I S ++VE
Sbjct: 185 VPPTAPKVLPTSVKRLPAVTKPGHPAAQSKASVPRQIKKEPK--AELISSAVGPLKVEAQ 242
Query: 260 VAEQ-SKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTN 318
V E+ S DDG +++ +D + + + QA+ I+ ++ ++I+E+
Sbjct: 243 VKEEDSGMVEFDDGDFDEPMEEDVEITPVDSSTIKTQAQ---SIKCVKEENIKEEKS--- 296
Query: 319 VESVSSAVELSTSPPPQVVEKKEHKCAEWEAI-QTEPSTSEPQVHSRTADDSLPLATDHE 377
S ++ L+ S C W+ I + EP T+E QV S LPL T +
Sbjct: 297 --SFITSATLNES------------C--WDQIDEAEPMTTEIQVDS----SHLPLVTGAD 336
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
+VFR ++LDA+ED Y QPG VYLFGKV+++ +++ SCCV V+NI+R +YLLPR +
Sbjct: 337 GSQVFRFYWLDAYEDQYSQPGVVYLFGKVWIESADAYVSCCVSVKNIERTVYLLPRENRV 396
Query: 438 K------TKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
+ T PVS+ VY EF++ +A +YKI+ FKS+K++K YAF +P VP SEYLEVR
Sbjct: 397 QLSTGKDTGAPVSMMHVYQEFNEAVAEKYKIMKFKSKKVDKDYAFEIPDVPASSEYLEVR 456
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKY 550
YSA P LP DL G+TFSHVFGT +S LE LL RKIKGPSWLE + +SWCK
Sbjct: 457 YSADSPQLPQDLKGETFSHVFGTNTSSLELFLLSRKIKGPSWLEIKSPQLSSQPMSWCKV 516
Query: 551 EVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
E + +++ + V ++ +T+ ++ +NE + + A ++ L
Sbjct: 517 EAVVTRPDQVSVVKDLAPPPVVVLSLSMKTVQNAKTHQNEIVAIAALVHHTFPL 570
>gi|332224116|ref|XP_003261212.1| PREDICTED: DNA polymerase alpha catalytic subunit [Nomascus
leucogenys]
Length = 1462
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/703 (51%), Positives = 476/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 826 DTNKYKKGRKKAAYVGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 886 AQKVTEDGEQQQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 944
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 945 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1004
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1005 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1064
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1065 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1119
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1120 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1179
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV +A L
Sbjct: 1180 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLVATWL 1239
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1240 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1293
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1294 NVFDGSGTDMEPSLYRCSNVDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1353
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1354 RNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1413
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1414 KDKLKKQFFTPKVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1456
Score = 269 bits (687), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 206/583 (35%), Positives = 304/583 (52%), Gaps = 63/583 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 20 RARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTAVYEEVDEEQYSKLVQARQDDDW 78
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAK--GDIQKLL 158
I DD G GYVEDGREIFDDD+ED + K+ + K +N++ P +I+ +
Sbjct: 79 IVDDDGIGYVEDGREIFDDDLEDDALDAGEKGKDGKARNKDKRNVKKPAVTKPNNIKSMF 138
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNT-----TIAPTLKLNTKTNEIVIPKEEPPAP 213
KK + V L+ DD+L D+L ++NT T P + L K + P
Sbjct: 139 IACAGKKTADKAVDLSKDDLLGDILQDLNTETPQITPPPVMILKKKRSIGASPNPFSVHT 198
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
T + P+ + E P+ P PL+ + D V + ++S +DG
Sbjct: 199 TMAVPSGKIASPVS---RKEPPLT--PVPLERAEFAGDDVQVETIEEEQESGAMEFEDG- 252
Query: 274 WEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
D+D + + D+ P AK Q E+ + ++++ D S + S
Sbjct: 253 -------DFDEPMEAEEVDLEPVAAKTWDQ-ESEPGEEVKQEAD-----SGKGTMSYLGS 299
Query: 332 PPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
P V C W+ Q + S E QV S LPL + ++VF ++LD
Sbjct: 300 FLPDV------SC--WDIDQEGDSSFSVQEVQVDS----SHLPLVKGADGEQVFHFYWLD 347
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEP 442
A+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T+ P
Sbjct: 348 AYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETETP 407
Query: 443 VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
+S+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLE++YSA+ P LP D
Sbjct: 408 ISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLELKYSAEMPQLPQD 467
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
L G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E + + +
Sbjct: 468 LKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPISWCKVEAMALKPDLVN 527
Query: 562 ITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ V +T+ ++ +NE + + A S+ L
Sbjct: 528 VIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFAL 570
>gi|195111871|ref|XP_002000500.1| GI10263 [Drosophila mojavensis]
gi|193917094|gb|EDW15961.1| GI10263 [Drosophila mojavensis]
Length = 1487
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/699 (50%), Positives = 469/699 (67%), Gaps = 44/699 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----------QYGKNKKE 608
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK Q +
Sbjct: 783 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKLPQRRGAVANTQTDPDATT 842
Query: 609 GEETG-EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
G +T A G RKKAAY+GGLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT
Sbjct: 843 GNDTTVAAGSGAARKKAAYAGGLVLEPLRGLYEKYVLLMDFNSLYPSIIQEYNICFTT-- 900
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
V+ D+D + LP+ + GILP ++++LVESRRQVK LM P+LS +L MQY IR
Sbjct: 901 VQQPHDADQLPV---LPDSSAEPGILPMQLRRLVESRRQVKKLMAVPDLSPELQMQYHIR 957
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q ALKLTANSMYGCLGF +SRFFAQ LAALVT KGREIL+NT+ LV+ LNY+V+YGDTDS
Sbjct: 958 QMALKLTANSMYGCLGFAHSRFFAQHLAALVTHKGREILVNTQQLVQKLNYDVVYGDTDS 1017
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
LMI+ N+ DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ ++K +
Sbjct: 1018 LMINTNITDYDQVYKIGHTIKQSVNKLYKQLELDIDGVFACLLLLKKKKYAAVKLTKNAK 1077
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G +I QE KG+D+VRRDWSQLA GK V+ ++L +D L+D+L +H + +I+
Sbjct: 1078 GVLIREQEHKGLDIVRRDWSQLAVMVGKAVLDEVL-----SDKPLEDKLDAVHAQLGRIK 1132
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
+ VPL L ITKQLT+AP+EY + +LPHVQVALR+N +++ K+GD + Y+IC
Sbjct: 1133 DQIAKSAVPLPLYVITKQLTRAPQEYANSASLPHVQVALRMNRERNRRYKKGDMVDYVIC 1192
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
DGT+ AA QRAY+++ELK++ LK+D NYYL QIHPVVTR++E +EGTDA RIAECLG
Sbjct: 1193 LDGTTNAAMQRAYHLDELKSSETLKLDTNYYLGNQIHPVVTRMVEVLEGTDASRIAECLG 1252
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGEAEEVK------YQFCDKFEFTCMNPSCKQ---VN 1078
+D+S YR + ++ E E E ++ Y+ C+ F F C+ SCK +
Sbjct: 1253 MDSSKYRQNAQRVQRERTEE----AEGESLQKTTLQLYRLCEPFRFKCV--SCKTEQLMA 1306
Query: 1079 TVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCED 1138
+ P S+H V VL +C+NPEC+ P YL + N+L M Y+ ++Y WL C+
Sbjct: 1307 SAYRPGPNSSH--VPVLQQCVNPECQTSPMQYLVSIRNQLQLCMRGYVQRFYRNWLVCDH 1364
Query: 1139 PGCSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDT 1196
P C+ TR L L+ R LC C+ + R Y+E LY QL + +I D++K
Sbjct: 1365 PDCNYNTRTYSLRLELRRPLCLKCNSGAMLRQYSERDLYNQLCYLRFIFDLSKQQLHQ-K 1423
Query: 1197 PSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
P++ E Y + VE+ + S+Y ++ L +F+
Sbjct: 1424 PTLT--PELEQAYQLLYDTVEQQFQCSSYVVISLGSIFA 1460
Score = 203 bits (516), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 179/599 (29%), Positives = 286/599 (47%), Gaps = 62/599 (10%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
G R KRQ+IDK+ +FAA ++LK LKG K + E D+ VYE V E+EY +R ++
Sbjct: 7 GPRVKRQRIDKSGRFAALERLKSLKGTKNKCQVEEKVDD-VYEVVDEREYAKRANEKYGG 65
Query: 104 DWIDDDGGDGYVEDGREIFDDDI----------EDVPQKKEKHDKRKKNKNIQNPNAKGD 153
DWI+DDG GY EDGR+ F+D+ D +KK + K++ + K
Sbjct: 66 DWIEDDGT-GYAEDGRDFFEDEDDYSDEEGRGQSDNKKKKTGNAKKRPRDDTGPAKGKAS 124
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTN-----EIVIPKE 208
I+ L +N + KK + + +DD+LAD+L E+ A + + +IV
Sbjct: 125 IRNLFSNA-IPKKADIKNSVKDDDILADILGEIKEEPAGDSSASQQQKIIAPAKIVAAAR 183
Query: 209 EPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEP 268
+ A AKEY+ +F IK++++ K + D I + M+ +
Sbjct: 184 KSDALAAKEYMNSFLSNIKMQEQQRKKEASNDDEMLDRILQPKATMQPNKTATTIAASAL 243
Query: 269 VDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVE-------- 320
V +Q + + + ++ PE +L ++ + ++ + V+
Sbjct: 244 VK---VKQEETTEQPRKKAKKEATPEPDDNDLDFSCLDDDENQFELAASKVKPAVKPELK 300
Query: 321 SVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKK 380
+S++V + P E WE+I E V + A+ + +D + +
Sbjct: 301 DISASVANGAAKPE--AEDMNKLLNNWESICQMDDDFEKSVLASEAEAAA--GSDPVDVE 356
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK-- 438
R ++ +A+ED K PG V+LFG+ S CV VQNI+R +YLLPR L
Sbjct: 357 QLRFWYWEAWEDAQKLPGEVFLFGRT-----ADGKSICVRVQNINRVLYLLPRQYLLDPI 411
Query: 439 TKEP----VSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPG--VPDLSEYLEVRY 491
TKEP V+ A +Y EFD IAT+ K+ F+SRK+ K +A + G VP +YLEV Y
Sbjct: 412 TKEPTKQKVTAADMYKEFDTHIATELKLDTFRSRKVSKNFANHAIGIDVPQTCDYLEVHY 471
Query: 492 SAKCPALPSDLSG--DTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
K PA P+ L+ D+ +H+FG ++ LE LL+RKIKGP WL+ P+ ISWCK
Sbjct: 472 DGKKPA-PNVLNKKYDSIAHIFGANTNALERFLLDRKIKGPCWLQISGFNINPAPISWCK 530
Query: 550 YEVQCNQMEKIRITNVCGNVLS-----------RTLMGGRSERNEFLLLHAF-HEKSYV 596
+V + + + + G RT M ++ +NE ++ H + Y+
Sbjct: 531 TDVTITEPKNVELVLEQGKPTPPPPLTLLTLNVRTSMNPKTLKNEICMISMLTHNRFYI 589
>gi|213623734|gb|AAI70149.1| DNA polymerase alpha [Xenopus laevis]
gi|213626038|gb|AAI70147.1| DNA polymerase alpha [Xenopus laevis]
Length = 1458
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/695 (51%), Positives = 464/695 (66%), Gaps = 29/695 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE-----GEETG- 613
++ITN+ GNV+SRTLMGGRSERNE+LLLHAF E ++++PDK K ++ ++ G
Sbjct: 766 LQITNIAGNVMSRTLMGGRSERNEYLLLHAFTENNFIVPDKPVFKKMQQTTVEDNDDMGT 825
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRML 671
+ NK K RKKAAY+GGLVLEPK GFYDKFI+L+DFNSLYPSIIQEYNICFTT+
Sbjct: 826 DQNKNKSRKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEYNICFTTVHREAPST 885
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
Q + LP ++ GILP EI+KLVE RR VK LMKQP+L+ DL +QYDIRQKAL
Sbjct: 886 QKGEDQDEIPELPHSDLEMGILPREIRKLVERRRHVKQLMKQPDLNPDLYLQYDIRQKAL 945
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLGF SRF+A+PLAALVT +GREILL+TK +V+ +N EVIYGDTDS+MI+
Sbjct: 946 KLTANSMYGCLGFSYSRFYAKPLAALVTHQGREILLHTKEMVQKMNLEVIYGDTDSIMIN 1005
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
N N+ + VFK+GN++KSE NK YK LE+DIDG++K +LLLKKKKYAAL++ +GK +
Sbjct: 1006 TNCNNLEEVFKLGNRVKSEINKSYKLLEIDIDGIFKSLLLLKKKKYAALTVEPTGDGKYV 1065
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
QE+KG+D+VRRDW +LA +AG +VISQIL +Q D ++NI + + +I ++
Sbjct: 1066 TKQELKGLDIVRRDWCELAKQAGNYVISQILSDQPR-----DSIVENIQKKLTEIGENVT 1120
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
NG VP+T EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDTISY+IC+DG+
Sbjct: 1121 NGTVPITQYEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTISYVICQDGS 1180
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
+ +A+QRAY E+L+ L ID YYLSQQ+HPVV R+ EPI+G D+ IA LGLD S
Sbjct: 1181 NLSASQRAYAQEQLQKQENLSIDTQYYLSQQVHPVVARICEPIDGIDSALIAMWLGLDPS 1240
Query: 1032 LYRSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
+R+ QQ EEN +G +E KY+ C++F+F C P C N + S
Sbjct: 1241 QFRAH--RHYQQDEENDALLGGPSQLTDEEKYRDCERFKFFC--PKCGTENIYDNVFDGS 1296
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
+ L C PEC P Y+ + NKL D+ +YI KYY GWL CE+ C + TRR
Sbjct: 1297 GLQIEPGLKRCSKPECDASPLDYVIQVHNKLLLDIRRYIKKYYSGWLVCEEKTCQNRTRR 1356
Query: 1148 CPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS------I 1199
PL +C C K L Y E LY QL F+ +I D AL K +
Sbjct: 1357 LPLSFSRNGPICQACSKATLRSEYPEKALYTQLCFYRFIFDWDYALEKVVSEQERGHLKK 1416
Query: 1200 KFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
K E+ Y K+K V++ L S Y+ V+L KLF
Sbjct: 1417 KLFQESENQYKKLKSTVDQVLSRSGYSEVNLSKLF 1451
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 218/594 (36%), Positives = 320/594 (53%), Gaps = 72/594 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K +K+ + A ++LK K G K KYE ++YEEV E EY++ V RQ+D
Sbjct: 9 ASRSRREKTEKSGRKEALERLKRAKA-GEKVKYEVEQVSSIYEEVDEAEYSKLVRDRQDD 67
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-------QKKEKHDKRK-KNKNIQNPNAKGDIQ 155
DWI DD G GYVEDGREIFDDD+ED K DK K ++ PN +I+
Sbjct: 68 DWIVDDDGTGYVEDGREIFDDDLEDNALADSGKGAKGAPKDKTNVKKSSVSKPN---NIK 124
Query: 156 KLLANMPVKKKKKEEVQLNNDDVLADLLS-----EVNTTIAPTLKLNTK------TNEIV 204
+ VKK + V L+ DD+L DLL V T P + L K N
Sbjct: 125 SMFMASAVKKTTDKAVDLSKDDLLGDLLQDLKSQAVPITPPPVITLKKKKLAGSPLNPFS 184
Query: 205 IPKEEPPA-PTAKEYLANFSKP----IKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMN 259
+P P P + + L +KP + + + + IKKEP + I S ++VE
Sbjct: 185 VPPTAPKVLPASVKRLPAVTKPGHPAAQSKASVPRQIKKEPK--AELISSAVGPLKVEAQ 242
Query: 260 VAEQ-SKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTN 318
V E+ S DDG +++ +D + + + QA+ I+ ++ ++I+E+
Sbjct: 243 VKEEDSGMVEFDDGDFDEPMEEDVEITPVDSSTIKTQAQ---SIKCVKEENIKEEKS--- 296
Query: 319 VESVSSAVELSTSPPPQVVEKKEHKCAEWEAI-QTEPSTSEPQVHSRTADDSLPLATDHE 377
S ++ L+ S C W+ I + EP T+E QV S LPL T +
Sbjct: 297 --SFITSATLNES------------C--WDQIDEAEPMTTEIQVDS----SHLPLVTGAD 336
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
+VFR ++LDA+ED Y QPG VYLFGKV+++ +++ SCCV V+NI+R +YLLPR +
Sbjct: 337 GSQVFRFYWLDAYEDQYSQPGVVYLFGKVWIESADAYVSCCVSVKNIERTVYLLPRENRV 396
Query: 438 K------TKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
+ T PVS+ VY EF++ +A +YKI+ FKS+K++K YAF +P VP SEYLEVR
Sbjct: 397 QLSTGKDTGVPVSMMHVYQEFNEAVAEKYKIMKFKSKKVDKDYAFEIPDVPASSEYLEVR 456
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKY 550
YSA P LP DL G+TFSHVFGT +S LE LL RKIKGPSWLE + +SWCK
Sbjct: 457 YSADSPQLPQDLKGETFSHVFGTNTSSLELFLLSRKIKGPSWLEIKSPQLSSQPMSWCKV 516
Query: 551 EVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
E + +++ + V ++ +T+ ++ +NE + + A ++ L
Sbjct: 517 EAVVTRPDQVSVVKDLAPPPVVVLSLSMKTVQNAKTHQNEIVAIAALVHHTFPL 570
>gi|334329499|ref|XP_001365174.2| PREDICTED: DNA polymerase alpha catalytic subunit [Monodelphis
domestica]
Length = 1462
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/703 (51%), Positives = 472/703 (67%), Gaps = 37/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GNV+SRT+MGGRSERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 758 LQITNIAGNVMSRTMMGGRSERNEFLLLHAFYENNYIVPDKQNFRKPQQRLGDEDEDIDG 817
Query: 614 EANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ NK K GRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 818 DTNKSKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 877
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
D IT E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDIR
Sbjct: 878 DQKITEDEEQEDIPDLPDPDLEMGILPKEIRKLVERRKQVKQLMKQQDLNPDLVLQYDIR 937
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 938 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 997
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S+
Sbjct: 998 IMINTNSTNLEEVFKLGNKVKSEVNKLYKMLEIDIDGIFKSLLLLKKKKYAALVVEPTSD 1057
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
GK + QE+KG+D+VRRDW LA E G FVI QIL +Q+ D + NI + + +I
Sbjct: 1058 GKYVTKQELKGLDIVRRDWCDLAKETGNFVIGQILSDQNR-----DTIVDNIQKRLIEIG 1112
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG VP++ EI K LTK P++Y D+K+LPHV VA+ +N+ KK+K GDT+SY++C
Sbjct: 1113 ENVTNGSVPISKFEINKALTKDPQDYPDKKSLPHVHVAIWINSHGGKKVKAGDTVSYVVC 1172
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ +A+QRAY E+LK L ID YYLSQQ+HPVV R+ EPI+G DA IA LG
Sbjct: 1173 QDGSNLSASQRAYAPEQLKKQDNLAIDTQYYLSQQVHPVVARICEPIDGIDAALIATWLG 1232
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD + +R + + + EEN +LG G A+ E KY+ C++F+F+C P C N +
Sbjct: 1233 LDPTQFR--VHQHYHKDEENDALLG-GPAQLSDEEKYRDCERFKFSC--PKCGTENICDG 1287
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
S + L C N +CK P T+ L NKL D+ + I KYY GWL CE+P C
Sbjct: 1288 VFDGSGTQIEPSLFRCCNIDCKASPMTFTDQLNNKLILDIRRCIKKYYSGWLICEEPTCQ 1347
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
TRR PL LC TC K L Y++ LY QL F+ Y+ D+ A K T K
Sbjct: 1348 TRTRRLPLQFSRSGPLCQTCMKATLRPEYSDKSLYTQLCFYRYMFDLDSAQEKLITDHEK 1407
Query: 1201 --------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
T Y K+K E FL S Y+ V L KLF+
Sbjct: 1408 DILRKKEHLFKPTLEAYRKLKSTAEHFLAGSGYSEVCLSKLFA 1450
Score = 263 bits (672), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 205/580 (35%), Positives = 309/580 (53%), Gaps = 60/580 (10%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K + A ++LK K G + KYE +VY+EV E +Y+ V RQ+D
Sbjct: 17 ASRSRREKKSAKGRQEALERLKKAKA-GERFKYEVEDFTSVYDEVDEDQYSRMVQARQDD 75
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP---QKKEKHDKRKKNKN------IQNPNAKGDI 154
DWI DD G GYVEDGREIFDD+++D KK K DK K+K + PN +I
Sbjct: 76 DWIVDDDGTGYVEDGREIFDDELDDDAFDVSKKGKGDKASKDKKNIKKAVVSKPN---NI 132
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPT 214
+ + KK + V L+ DD+L D+L ++N++ P + T +++ K+ P +
Sbjct: 133 KSMFMASAGKKTTDKVVDLSKDDLLGDILQDLNSS-TPQI---TPPPVMMLKKKRPTGAS 188
Query: 215 AKEYLANFSKPIKVEKKIEKPIKKEPSPLK-DEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ K + K + PI + SP+ ++K D + + A + +EE DGL
Sbjct: 189 LNPFSVQIPKATPLGKN-DVPISRRESPVTLVDLKHADYMAKPSDEEASEEEEE---DGL 244
Query: 274 WEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
+ + D+D + + D LP+ K + + + E NVE SS ++ S
Sbjct: 245 MD-FEDGDFDEPMEDEEADSLPKAIKTQEEEKEQE----------KNVEPESSHLD---S 290
Query: 332 PPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFE 391
P V C W+ + E +S + + LPL + +VF ++LDA+E
Sbjct: 291 FLPDV------SC--WDKMDQEDESSLRTQEIQVDSNHLPLVKGADGDQVFLFYWLDAYE 342
Query: 392 DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPVSI 445
D + QPG V+LFGKV+++ +H SCCV+V+NI+R ++LLPR + K PV++
Sbjct: 343 DQFNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLHLLPREVRIDLATGEKKGNPVTM 402
Query: 446 AQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSG 504
VY EFD+ AT+YKI+ FKSRK+EK YAF +P VP+ SEYLEVRYSA+ P LP DL G
Sbjct: 403 KDVYQEFDEKTATKYKIMKFKSRKVEKNYAFEIPDVPEKSEYLEVRYSAELPQLPQDLKG 462
Query: 505 DTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITN 564
+TFSHVFGT +S LE L+ R+IKGP WLE + ISWCK E + + + +
Sbjct: 463 ETFSHVFGTNTSSLELFLMNRRIKGPCWLEIKNPQLLNQPISWCKVEAMALKPDLVNVVK 522
Query: 565 -------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
V + +T+ ++ +NE + L A S+ L
Sbjct: 523 DIAPPPLVIMSFSLKTMQNAKTHQNEVIALAALIHHSFPL 562
>gi|62086803|dbj|BAD92008.1| DNA polymerase alpha catalytic subunit [Trachemys scripta]
Length = 1441
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/702 (51%), Positives = 471/702 (67%), Gaps = 40/702 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK-----EGEETGE 614
++ITN+ GNV+SRT+MGGRSERNEFLLLHAF+E+ Y++PDKQ K + E E +
Sbjct: 736 LQITNISGNVMSRTMMGGRSERNEFLLLHAFYERDYIVPDKQVFKKPQQKLVDEDEGVED 795
Query: 615 ANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
NK K GRKKAAY+GGLVL+PK GFYD FI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 796 QNKSKIGRKKAAYAGGLVLDPKVGFYDTFILLLDFNSLYPSIIQEFNICFTTV---QRES 852
Query: 674 SDITTLCE--------YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
SD E LP+ ++ GILP EI+KLVE RRQVK LMKQP+L+ DL +QYD
Sbjct: 853 SDAQKRAEDGVQEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLYLQYD 912
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDT 785
IRQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDT
Sbjct: 913 IRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYGDT 972
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
DS+MI+ N + + VFK+GN+IKSE NKLYK LE+DIDGV+K +LLLKKKKYAAL++
Sbjct: 973 DSIMINTNSTNLEEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALTVEPT 1032
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+GK + QE+KG+D+VRRDW LA E G +VI QIL +QS D ++NI + +
Sbjct: 1033 GDGKYVTKQELKGLDIVRRDWCDLAKETGNYVIGQILSDQSR-----DTIVENIQRRLIE 1087
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
I ++ NG VP++ EI K LTK P++Y D+K+LPHV VA+ +N+ +K+K GDT+SY+
Sbjct: 1088 IGENVINGRVPISQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQEGRKVKAGDTVSYV 1147
Query: 966 ICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAEC 1025
IC+DG++ +A+QRAY E+L+ L +D YYLSQQIHPVV R+ EPI+G D+V IA
Sbjct: 1148 ICQDGSNLSASQRAYAPEQLQKQENLTVDTQYYLSQQIHPVVARICEPIDGIDSVLIATW 1207
Query: 1026 LGLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTV 1080
LGLD S ++ I + EEN +LG G A+ E KY+ C++F+F+C P C N
Sbjct: 1208 LGLDPSQFK--IHHHYHKDEENDALLG-GPAQLTDEEKYRDCERFKFSC--PRCGTENIY 1262
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPG 1140
+ S + L +C EC P+ Y + NKL D+ +Y+ YY WL CE+P
Sbjct: 1263 DNVFDGSGKLMEPSLQQCSKKECDESPFNYTIQMNNKLLLDIRRYLKSYYNSWLICEEPT 1322
Query: 1141 CSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS 1198
C + TRR PL LC C K L Y++ LY QL F+ YI D+ A+ K T
Sbjct: 1323 CQNRTRRLPLSFSQNGALCQACKKAILRPEYSDKALYTQLCFYRYIFDVDYAMDKVITDQ 1382
Query: 1199 IKFDSETYMG------YCKMKQHVERFLESSAYNIVDLKKLF 1234
K + + Y K+K V++FL S Y+ V+L KLF
Sbjct: 1383 EKESMKRKLTINETEVYRKLKNTVDKFLSMSGYSEVNLSKLF 1424
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 291/564 (51%), Gaps = 75/564 (13%)
Query: 83 NVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIED---------VPQKK 133
+VYEEV E +Y++ V +RQ+DDWI DD G GYVEDGREIFD+D+ED K
Sbjct: 3 SVYEEVDEAQYSKMVRERQDDDWIVDDDGIGYVEDGREIFDEDLEDDVLGSKKKGKGDKT 62
Query: 134 EKHDKRKKNKNI-QNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT---- 188
+DK+ K++ PN I+ + KK + V L+ DD+L D+L ++N
Sbjct: 63 STNDKKNVKKSVVSKPNT---IKSMFMASAGKKNTDKTVDLSKDDLLGDILQDLNAETIQ 119
Query: 189 -TIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANF-------SKPIKVEKKIEKPIKKEP 240
T P +KL K P P + + A+ P V+K++ P +P
Sbjct: 120 ITPPPVVKLRKKR-----PVGASLNPFSVQSPAHMVVTPIVRKAPTTVKKEVISPTTADP 174
Query: 241 S----PLKDEIKSNDSVMEVEMNVAEQSK------EEPVDDGLWEQMQIDDWDNSQQTQD 290
K ++ E + AE + E+ + + M +D D + +
Sbjct: 175 KHTTYAAKPVAVHKENGAEYTIKTAENEELVKAKPEKAIQENDQGMMDFEDGDFDEPMEA 234
Query: 291 VLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAI 350
+PE A A++ + EK + V+SV +S P + C W +
Sbjct: 235 DIPETAG------ALKKEQKLEKKETQQVDSVKEDASFLSSFLPDM------SC--WTRM 280
Query: 351 ---QTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVF 407
+T+ SE QV LPL + +VFR ++LDA+ED Y QPG V+LFGKV+
Sbjct: 281 DKDETDLVASEVQVDP----SCLPLVNGEDGDQVFRFYWLDAYEDQYSQPGVVFLFGKVW 336
Query: 408 VKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPVSIAQVYSEF-DQIATQYK 460
++ ++ SCCV V+NI+R IYLLPR + +T+ PV++ +Y EF DQIA +YK
Sbjct: 337 IESAETYVSCCVTVKNIERIIYLLPREMQMDLTSGKETENPVTMMNIYQEFNDQIAVKYK 396
Query: 461 ILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLEN 520
I+ F+S+K+EK YAF +P VP S+YLEVRYSA+ P LP DL G+TFSHVFGT +S LE
Sbjct: 397 IMKFRSKKVEKNYAFEIPDVPAKSDYLEVRYSAEFPRLPQDLKGETFSHVFGTNTSSLEL 456
Query: 521 LLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITN-------VCGNVLSRT 573
LL+ RKIKGPSWLE + +SWCK E + + + I V ++ RT
Sbjct: 457 LLMSRKIKGPSWLEIKNPQPLSHPVSWCKVEATALKPDLVNIVKDLPPPPLVIMSLSMRT 516
Query: 574 LMGGRSERNEFLLLHAFHEKSYVL 597
+ ++ ++E + + A + + L
Sbjct: 517 IQNVKTHQHEVMAVAALVHQRFCL 540
>gi|410988300|ref|XP_004000424.1| PREDICTED: DNA polymerase alpha catalytic subunit [Felis catus]
Length = 1462
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/703 (51%), Positives = 478/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GN++SRTLMGGR+ERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 766 LQITNIAGNIMSRTLMGGRAERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEDLDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ANK KGRKKAAY+GGLVL+PK G YDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 826 DANKYKKGRKKAAYAGGLVLDPKAGLYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
+ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 886 AHKATEDGEQEQIPE-LPDPNLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 944
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 945 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1004
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + V+K+GN++KSE NKLY+ LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1005 SIMINTNSTNLEEVYKLGNKVKSEVNKLYRLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1064
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G I QE+KG+D+VRRDW LA E G FV+ QIL +QS D ++NI + + +I
Sbjct: 1065 DGNYITKQELKGLDIVRRDWCDLAKETGNFVLGQILSDQSR-----DTIVENIQKRLIEI 1119
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1120 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1179
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ +A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1180 CQDGSNLSASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1239
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD++ +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1240 GLDSTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1293
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ S + L C N +CK P T++ L NKL D+ + I KYYEGWL CE+P C
Sbjct: 1294 SVFDGSGTDIEPSLYRCSNIDCKASPLTFMVQLSNKLIMDIRRCIKKYYEGWLMCEEPAC 1353
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TRR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1354 RNRTRRLPLQFSRNGPLCQVCMKATLRPEYSDKSLYTQLCFYRYIFDADCALEKLITDHE 1413
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1414 KDKWKKQFFTPKVRQDYQKLKNTAEQFLSRSGYSEVNLSKLFA 1456
Score = 262 bits (669), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 203/584 (34%), Positives = 308/584 (52%), Gaps = 61/584 (10%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRSRREKKSKRGRQEALERLKRAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP---------QKKEKHDKRKKNKNI-QNPNAKGD 153
DWI DD G GYVEDGREIFDDD+ED +K D+R K + PN +
Sbjct: 77 DWIVDDDGIGYVEDGREIFDDDLEDDALDSYEKGKDEKARTKDRRNVKKTVVTKPN---N 133
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
I+ L KK + V L+ DD+L D+L + LNT+T +I +P P
Sbjct: 134 IKSLFIASAGKKTADKAVDLSKDDLLGDILQD----------LNTETPQITLPPVM--IP 181
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEP----V 269
K + + P V P +K SP+ + + V + AE + E +
Sbjct: 182 KKKRSIGDSLNPFSVHTPKAVPSRKTASPVS---RKEPPLTSVPLKRAEFAGESGPALCI 238
Query: 270 DDGL-WEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVEL 328
DD M +D D + P +A+ E+ +E + ++ +++ + E V +
Sbjct: 239 DDKKDSGTMNFEDGDFDE------PMEAE-EVDVEPMAVKTWDQESE--PAEGVKHEADP 289
Query: 329 STSPPPQVVE-KKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFL 387
P + + C W+ Q + S+ Q + LPL + ++VF+ ++L
Sbjct: 290 GKGPLSYLGSFLPDVSC--WDIDQEDDSSFSAQ-EVQVDSGHLPLVKGADEEQVFQFYWL 346
Query: 388 DAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKE 441
DA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T+
Sbjct: 347 DAYEDQYTQPGVVFLFGKVWIESAKTHVSCCVMVKNIERTLYFLPRETKIDLNTGKETET 406
Query: 442 PVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
V++ VY EFD+ IA +YKI+ FKS+++EK YAF +P VP+ SEYLEVRY+A+ P LP
Sbjct: 407 LVTMKDVYDEFDEKIAAKYKIMKFKSKQVEKNYAFEIPDVPEKSEYLEVRYAAEMPQLPQ 466
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKI 560
DL G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E + + +
Sbjct: 467 DLKGETFSHVFGTNTSSLEIFLMNRKIKGPCWLEVKNPQLLNPPVSWCKVEAVALKPDLV 526
Query: 561 RITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+ G V+S +T+ ++ +NE + + A S+ L
Sbjct: 527 NVIKDVGPPPVVVMSLSMKTMQNAKTHQNEIIAVAALVHHSFEL 570
>gi|402909736|ref|XP_003917565.1| PREDICTED: DNA polymerase alpha catalytic subunit [Papio anubis]
Length = 1465
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/703 (51%), Positives = 475/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 769 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 828
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ +K KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 829 DTSKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 888
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 889 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 947
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 948 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1007
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S
Sbjct: 1008 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTS 1067
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1068 DGNYATKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1122
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1123 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1182
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1183 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1242
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1243 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1296
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1297 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1356
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1357 GNRTRHLPLQFSRTGPLCPACMKATLRPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1416
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1417 KDKLKKQFFTPRVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1459
Score = 270 bits (691), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 304/591 (51%), Gaps = 75/591 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+D
Sbjct: 21 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDD 79
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD+ED + K+ + K +N++ P +I+
Sbjct: 80 DWIVDDDGIGYVEDGREIFDDDLEDDALDAGEKGKDGKARNKDKRNVKKPAVTKPNNIKS 139
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA- 215
+ KK + V L+ DD+L D+L ++NT P+ PP T
Sbjct: 140 MFIACAGKKTADKAVDLSKDDLLGDILQDLNTET---------------PQITPPPVTIL 184
Query: 216 --KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE--------QSK 265
K + P V P K SP+ + + V + AE +S
Sbjct: 185 KKKRSIGASPNPFSVHTSTAVPSGKIASPVS---RKEPPLTPVPLKRAEFAGEPIQVEST 241
Query: 266 EEPVDDGLWEQMQIDDWDNSQQTQDVL--PEQAKVELQIEAIESQSIEEKVDVTNVESVS 323
EE + G E + D+D +T++V P AK Q E+ ++ ++++ D
Sbjct: 242 EEEQESGAME-FEDGDFDEPMETEEVHLEPMAAKAWDQ-ESEPAEEVKQEAD----SGKG 295
Query: 324 SAVELSTSPPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKK 380
+ +L P + C W+ Q + S E QV S LPL + ++
Sbjct: 296 TMSDLGRFLP-------DVSC--WDIDQEGDSSFSVQEVQVDS----SQLPLVKGADEEQ 342
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL--- 437
VF ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR +
Sbjct: 343 VFHFYWLDAYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLN 402
Query: 438 ---KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
+T PVS+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA
Sbjct: 403 TGKETGTPVSMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSA 462
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQ 553
+ P LP DL G+TFSH+FGT +S LE L+ RKIKGP WLE + ISWCK E
Sbjct: 463 EIPQLPQDLKGETFSHIFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPISWCKVEAM 522
Query: 554 CNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + V +T+ ++ +NE + + A S+ L
Sbjct: 523 ALKPDLVNVIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAVAALVHHSFAL 573
>gi|194742070|ref|XP_001953530.1| GF17808 [Drosophila ananassae]
gi|190626567|gb|EDV42091.1| GF17808 [Drosophila ananassae]
Length = 1481
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/690 (50%), Positives = 474/690 (68%), Gaps = 33/690 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG--EETGEANK 617
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK+ + G E T A+
Sbjct: 784 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKKASNRRGGGDPENTIIADA 843
Query: 618 G-KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
RKKAAY+GGLVLEP +G Y+KF++LMDFNSLYPSIIQEYNICFTT+ + D
Sbjct: 844 TLPVRKKAAYAGGLVLEPMRGLYEKFVLLMDFNSLYPSIIQEYNICFTTVQQPVDADELP 903
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
T LPE +V+ GILP ++K+LVESR++VK LM P+LS +L MQY IRQ ALKLTAN
Sbjct: 904 T-----LPESKVEAGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTAN 958
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
SMYGCLGF +SRFFAQ LAALVT KGREIL NT+ +V+ +NY+V+YGDTDS+MI+ N+ D
Sbjct: 959 SMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQMVQKMNYDVVYGDTDSIMINTNITD 1018
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
YD V+KIG +IK NK+YKQLELDIDGV+ +LLLKKKKYAA+ +SK S G + QE
Sbjct: 1019 YDQVYKIGREIKQSVNKMYKQLELDIDGVFACLLLLKKKKYAAVKLSKDSKGNLKREQEH 1078
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+ ++ G VP
Sbjct: 1079 KGLDIVRRDWSQLAVMVGKAVLDEVLAEK-----QLEEKLDAVHTQLEKIKQQINEGAVP 1133
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT 976
L L ITKQLT+AP+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT+ AA
Sbjct: 1134 LPLFVITKQLTRAPQEYANSASLPHVQVALRMNRERNRRYKKGDMVDYVICLDGTTNAAM 1193
Query: 977 QRAYNIEELKN--NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
QRAY+++ELK+ + KL++D NYYL QQIHPVVTR++E +EGTDA RIAE LG+D + +R
Sbjct: 1194 QRAYHLDELKSSEDKKLQLDTNYYLGQQIHPVVTRMVEVLEGTDASRIAESLGMDPTKFR 1253
Query: 1035 SQIKESIQQSEENILGVGEAEEV------KYQFCDKFEFTCMNPSCKQVNTVEAPTRL-S 1087
++ Q+++ I E E + Y+ C+ F F CM +CK + + R +
Sbjct: 1254 ----QNAQRAQREIAEQSEGESLLKTTLQLYRLCEPFRFQCM--ACKTEQLMASAYRPGA 1307
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
+H V VL +C N EC+ P YL + N+L D+ +++ ++Y+ WL C+ P C+ TR
Sbjct: 1308 SHTHVPVLQQCSNAECQTAPIQYLASVRNQLQLDIRRHVQRFYKNWLVCDHPDCNYNTRT 1367
Query: 1148 CPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSET 1205
L R LC C L R YTE LY QL + ++ D+ K + P++ E
Sbjct: 1368 HTLKKDVRRPLCQKCKSGSLLRQYTERDLYNQLCYLRFMFDLGKQQLQQ-KPTLT--PEL 1424
Query: 1206 YMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
Y + + V++ L++S+Y ++ L+KLF
Sbjct: 1425 EQAYQLLYETVDQHLQTSSYVVISLRKLFG 1454
Score = 229 bits (583), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 194/617 (31%), Positives = 303/617 (49%), Gaps = 97/617 (15%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
G RAKRQ+IDK +FAA ++L+ LKG K + E D +VYE V E+EY +R ++ D
Sbjct: 7 GPRAKRQRIDKNGRFAAMERLRQLKGTKNKCQVEDQVD-DVYEVVDEREYAKRAQEKYGD 65
Query: 104 DWIDDDGGDGYVEDGREIFDD--DIEDVPQKKEKHDKRKKNKNIQNPN-----------A 150
DWI+DDG GY EDGR+ F+D D D +++EK +KK N N
Sbjct: 66 DWIEDDGT-GYAEDGRDFFEDEDDYSDAGEEEEKTKGKKKKGVSANSNKRPRESDKPAKG 124
Query: 151 KGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKE-- 208
K I+ L +N V KK + + +DD+LAD+L E+ +TK +++ P +
Sbjct: 125 KASIKNLFSNA-VPKKVDIKTSVKDDDILADILGEIKEEPGEE---STKVEKVIAPAKIA 180
Query: 209 ----EPPAPTAKEYLANFSKPIKVEKK-------------IEKPIK-KEPSPLKDEIKSN 250
+ A AK+Y+ +F K IKV+++ +E+ +K K P P K
Sbjct: 181 AVTRKSEAAAAKDYMNSFLKNIKVQEQERKKAEASSDHEMLERILKPKAPVPNKKVATFA 240
Query: 251 DSVMEVEMNV------AEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEA 304
+ ++ E ++ A+ S ++ D + +DD +N Q +
Sbjct: 241 TASVKKEKDIPETKPAAKGSSQDAFSDNEMDFSCLDDDEN----------------QFDL 284
Query: 305 IESQSIEEKV-DVTNVESVSSAVELSTSPPPQV-VEKKEHKCAEWEAIQTEPSTSEPQVH 362
+S+ EEK VE V E + SPP + E + WE+I E V
Sbjct: 285 EQSKQPEEKTPQAKPVEKVVPKKEPAESPPKEADPEDMSKLLSNWESICQMDDDFEKSV- 343
Query: 363 SRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQ 422
T + P+++ + R +F +A+ED K PG V+LFG+ S CV VQ
Sbjct: 344 -TTGEQDAPISSSEQ----LRFWFWEAWEDPTKLPGEVFLFGRT-----ADGKSVCVRVQ 393
Query: 423 NIDRKIYLLPRSEHLK------TKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAF 475
NI+R +YLLPR L TKE V++A +Y EFD ++AT+ K+ F+SRK+ K +A
Sbjct: 394 NINRVLYLLPRQYLLDPISKEPTKEKVTVADIYKEFDSEVATELKLDTFRSRKVSKNFAH 453
Query: 476 NLPG--VPDLSEYLEVRYSAK--CPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPS 531
+ G VP +YLEV Y K P L ++ ++ +HVFG+ ++ LE LL+RKIKGP
Sbjct: 454 HAIGIDVPQTCDYLEVHYDGKKPPPTLAANKKYNSIAHVFGSTTNALERFLLDRKIKGPC 513
Query: 532 WLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLS-----------RTLMGGRSE 580
WL+ + P+ +SWCK EV ++ + + + G RT M ++
Sbjct: 514 WLQVSGFKLSPAPMSWCKTEVTVSEPKNVELVQDKGKPAPPPPLTLLALNVRTCMNPKTM 573
Query: 581 RNEFLLLHAF-HEKSYV 596
+NE ++ H + ++
Sbjct: 574 KNEICMISMLTHNRFHI 590
>gi|301608173|ref|XP_002933658.1| PREDICTED: DNA polymerase alpha catalytic subunit [Xenopus (Silurana)
tropicalis]
Length = 1462
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/696 (51%), Positives = 463/696 (66%), Gaps = 30/696 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE-------GEET 612
++ITN+ GNVLSRTLMGGRSERNE+LLLHAF E ++++PDK K ++ +T
Sbjct: 769 LQITNIAGNVLSRTLMGGRSERNEYLLLHAFTENNFIVPDKPVFKKIQQTTVEDDDNMDT 828
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP--VRM 670
+ KGRKKAAY+GGLVLEPK GFYDKFI+L+DFNSLYPSIIQEYNICFTT+
Sbjct: 829 DQNKNKKGRKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEYNICFTTVQREAPT 888
Query: 671 LQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
Q + LP ++ GILP EI+KLVE RR VK LMKQP+L+ DL +QYDIRQKA
Sbjct: 889 SQKGEDQEEIPELPHSDLEMGILPREIRKLVERRRHVKQLMKQPDLNPDLYLQYDIRQKA 948
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANSMYGCLGF SRF+A+PLAALVT +GREILL+TK +V+ +N EVIYGDTDS+MI
Sbjct: 949 LKLTANSMYGCLGFSYSRFYAKPLAALVTHQGREILLHTKEMVQKMNLEVIYGDTDSIMI 1008
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ N N+ + VFK+GN++KSE NK YK LE+DIDG++K +LLLKKKKYAAL++ +GK
Sbjct: 1009 NTNCNNLEEVFKLGNRVKSEVNKSYKLLEIDIDGIFKSLLLLKKKKYAALTVEPTGDGKY 1068
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
+ QE+KG+D+VRRDW +LA EAG +VISQIL +Q D+ ++NI + + +I ++
Sbjct: 1069 VTKQELKGLDIVRRDWCELAKEAGNYVISQILSDQPR-----DNIVENIQKKLTEIGENV 1123
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
NG VP++ EI K LTK P++Y D+K+LPHV VA+ +N+ +K+K GDTISY+IC+DG
Sbjct: 1124 TNGTVPISQYEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKAGDTISYVICQDG 1183
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
++ +A+QRAY E+L+ L ID YYLSQQ+HPVV R+ EPI+G D+ IA LGLD
Sbjct: 1184 SNLSASQRAYAPEQLQKQENLSIDTQYYLSQQVHPVVARICEPIDGIDSALIAMWLGLDP 1243
Query: 1031 SLYRSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL 1086
S +R+ QQ EEN +G +E KY+ C++F+F C P C N +
Sbjct: 1244 SQFRAHRHH--QQDEENDALLGGPSQLTDEEKYRDCERFKFFC--PKCGTENIYDNVFDG 1299
Query: 1087 STHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
S + L C PEC P Y+ + NKL D+ +YI KYY GWL CE+ C + TR
Sbjct: 1300 SGLQIEPGLKRCSKPECDASPLDYVIQVQNKLLLDIRRYIKKYYSGWLVCEEKTCQNRTR 1359
Query: 1147 RCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS------ 1198
R PL +C C K L Y E LY QL F+ +I D AL K +
Sbjct: 1360 RVPLSFSRNGPICQACTKATLRSEYPEKALYTQLCFYRFIFDWDYALEKVVSEQERGHLK 1419
Query: 1199 IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
K E+ Y K+K V++ L S Y+ V+L KLF
Sbjct: 1420 KKHFQESENLYKKLKSTVDQVLSQSGYSEVNLSKLF 1455
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 213/592 (35%), Positives = 312/592 (52%), Gaps = 72/592 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K +K+ + A ++LK K G K KYE ++YEEV E++Y++ V RQ+D
Sbjct: 9 ASRSRREKTEKSGRKEALERLKRAKA-GEKVKYEVEEISSIYEEVDEEQYSKIVRDRQDD 67
Query: 104 DWIDDDGGDGYVEDGREIFDDDIED-----VPQKKEKHDKRKKNKNIQNPNAKGDIQKLL 158
DWI DD G GYVEDGREIFDDD+ED ++ + K K N + + +I+ +
Sbjct: 68 DWIVDDDGTGYVEDGREIFDDDLEDNALADSGKRAKGAPKDKSNVKKSSVSKPNNIKSMF 127
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAP-------TLKLNTKTNEIVIPKEEPP 211
VK+ + V L+ DD+L DLL ++ + P TLK + P PP
Sbjct: 128 MASAVKRTTDKTVDLSKDDLLGDLLQDLKSQALPITPPPVITLKKKKLAGSPLNPFSVPP 187
Query: 212 A---------PTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE 262
A P A L + S + +E +K+E S D + +NV
Sbjct: 188 AAPKVLPVKKPPALAKLGHLSSAAPSNNSASSFVPRE---IKNEPNS-DLISSAPLNVKT 243
Query: 263 QSKEEPV-----DDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVT 317
Q KEE DDG +++ + DN + V K E +I+ ++ S++
Sbjct: 244 QVKEEDTSMVEFDDGDFDEPM--EEDNLESPSVVSSTIKKEEPKIKCVKEDSVK-----M 296
Query: 318 NVESVSSAVELSTSPPPQVVEKKEHKCAEWEAI-QTEPSTSEPQVHSRTADDSLPLATDH 376
S ++ L+ S C W+ I + E T+E QV S LPL T
Sbjct: 297 EESSFMTSAALNES------------C--WDQIDEVESMTTEVQVDS----SRLPLVTGA 338
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
+ +VF+ ++LDA+ED Y QPG VYLFGKV+++ ++ SCCV V+NI+R +YLLPR
Sbjct: 339 DGSQVFKFYWLDAYEDQYSQPGVVYLFGKVWIETAEAYVSCCVSVKNIERTVYLLPRENR 398
Query: 437 LK------TKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ T PVS+ VY EF++ +A +YKI+ FKS+K+EK YAF +P VP SEYLEV
Sbjct: 399 VQLSTGKDTGVPVSMMNVYQEFNESVAEKYKIMKFKSKKVEKDYAFEIPDVPASSEYLEV 458
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
RYSA P LP DL G+TFSHVFGT +S LE LL RKIKGPSWLE + +SWCK
Sbjct: 459 RYSADSPQLPQDLKGETFSHVFGTNTSSLELFLLSRKIKGPSWLEIKSPQLSSQPMSWCK 518
Query: 550 YEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAF-HEK 593
E + +++ + V ++ +T+ ++ +NE + + A H K
Sbjct: 519 VEAVVMRPDQVNVVKDLAPPPVVVLSLSMKTVQNAKTHQNEIVAMAALVHHK 570
>gi|6679409|ref|NP_032918.1| DNA polymerase alpha catalytic subunit [Mus musculus]
gi|544185|sp|P33609.2|DPOLA_MOUSE RecName: Full=DNA polymerase alpha catalytic subunit; AltName:
Full=DNA polymerase alpha catalytic subunit p180
gi|442471|dbj|BAA04202.1| DNA polymerase alpha catalytic subunit p180 [Mus musculus]
gi|475159|dbj|BAA40003.1| DNA polymerase alpha catalytic subunit [Mus musculus]
gi|148697793|gb|EDL29740.1| polymerase (DNA directed), alpha 1 [Mus musculus]
Length = 1465
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/700 (51%), Positives = 476/700 (68%), Gaps = 34/700 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 770 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 829
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV---- 668
+ NK KGRKKA Y+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 830 DTNKYKKGRKKATYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVTSE 889
Query: 669 --RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
+ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 890 VQKATEDEEQEQIPE-LPDPNLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 948
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 949 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKDMVQKMNLEVIYGDTD 1008
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DID V+K +LLLKKKKYAAL + S
Sbjct: 1009 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDAVFKSLLLLKKKKYAALVVEPTS 1068
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G I QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1069 DGNYITKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1123
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y DRK+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1124 GENVLNGSVPVSQFEINKALTKDPQDYPDRKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1183
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ ATQRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1184 CQDGSNLTATQRAYAPEQLQKLDNLAIDTQYYLAQQIHPVVARICEPIDGIDAVLIALWL 1243
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
GLD++ +R + + + E + L G A+ E KY+ C+KF+ C+ PSC N +
Sbjct: 1244 GLDSTQFR--VHQYHKDEENDALLGGPAQLTDEEKYKDCEKFK--CLCPSCGTENIYDNV 1299
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
S + L C N +CKV P T++ L NKL D+ + I KYY+GWL CE+P C
Sbjct: 1300 FEGSGLDMEPSLYRCSNVDCKVSPLTFMVQLSNKLIMDIRRCIKKYYDGWLICEEPTCCS 1359
Query: 1144 LTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA---LTKSDTPS 1198
RR PL LC C K L Y++ LY QL F+ YI D A LT+ +
Sbjct: 1360 RLRRLPLHFSRNGPLCPVCMKAVLRPEYSDKSLYTQLCFYRYIFDADCALEKLTEHEKDK 1419
Query: 1199 IK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1420 LKKQFFPLRVLQDYRKVKNIAEQFLSWSGYSEVNLSKLFA 1459
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 204/589 (34%), Positives = 308/589 (52%), Gaps = 73/589 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 24 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSVYEEVDEEQYSKLVQARQDD 82
Query: 104 DWIDDDGGDGYVEDGREIFDDDIE-----DVPQKKEKHDKRKKNKNIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD+E + + RK K+++ P+ +I+
Sbjct: 83 DWIVDDDGIGYVEDGREIFDDDLEDDALDTCGKGSDGKAHRKDRKDVKKPSVTKPNNIKA 142
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK 216
+ KK + V L+ DD+L D+L ++NT A ++IPK+ K
Sbjct: 143 MFIASAGKKTTDKAVDLSKDDLLGDILQDLNTETA-----QITPPPVLIPKK-------K 190
Query: 217 EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEE-----PVDD 271
P V P K SP+ +++ + + + AE + E P D+
Sbjct: 191 RSTGALLNPFSVHTPKAIPSGKPASPV---LRNEPLLTPIPLKRAELAGELAQPECPEDE 247
Query: 272 GLWEQMQIDD--WDNSQQTQDV--LPEQAKVELQ----IEAIESQSIEEKVDVTNVESVS 323
M+ +D +D S T+ V P AK Q +E +E ++ E+ + +E+
Sbjct: 248 QELGVMEFEDGDFDESMDTEKVDEKPVTAKTWDQETEPVERVEHEADPERGTTSYLENFL 307
Query: 324 SAVELSTSPPPQVVEKKEHKCAEWEAIQTEPST-SEPQVHSRTADDSLPLATDHENKKVF 382
V W+ Q + S E QV S +LPL ++++VF
Sbjct: 308 PDVSC------------------WDIDQDDESIPQEVQVDS----SNLPLVKGADDEQVF 345
Query: 383 RMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL----- 437
+ ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR
Sbjct: 346 QFYWLDAYEDPYNQPGVVFLFGKVWIESVKTHVSCCVMVKNIERTLYFLPREMKFDLNTG 405
Query: 438 -KTKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKC 495
+T PV++ VY EFD +I+ +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+
Sbjct: 406 KETAIPVTMKDVYEEFDSKISAKYKIMKFKSKIVEKNYAFEIPDVPEKSEYLEVRYSAEV 465
Query: 496 PALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCN 555
P LP +L G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK+EV
Sbjct: 466 PQLPQNLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKFEVMAL 525
Query: 556 QMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + V + +T+ ++ ++E + + A S+ L
Sbjct: 526 KPDLVNVIKDVSPPPLVVMSFSMKTMQNVQNHQHEIIAMAALVHHSFAL 574
>gi|403263646|ref|XP_003924130.1| PREDICTED: DNA polymerase alpha catalytic subunit isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1462
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/702 (51%), Positives = 472/702 (67%), Gaps = 37/702 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKSQQKLGDEDEEIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 826 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVAAE 885
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
IT E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDIR
Sbjct: 886 AQKITEDGEQEQIPELPDPNLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIR 945
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 946 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 1005
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + +
Sbjct: 1006 IMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTLD 1065
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1066 GNYVTKQELKGLDIVRRDWCDLAKDTGSFVIGQILSDQSR-----DTIVENIQKRLIEIG 1120
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+IC
Sbjct: 1121 ENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVIC 1180
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA LG
Sbjct: 1181 QDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLG 1240
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1241 LDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCRC--PTCGTENIYDN 1294
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
S + L C N +C P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1295 VFDGSGTDMEPSLYRCSNIDCNASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTCR 1354
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
+ TR PL LC C K L Y++ LY QL F+ YI D+ AL K T K
Sbjct: 1355 NRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDVECALEKLTTDHEK 1414
Query: 1201 -------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1415 DKLKKQFLTPKVIQEYRKLKNTAEQFLSRSGYSEVNLSKLFA 1456
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 206/604 (34%), Positives = 302/604 (50%), Gaps = 101/604 (16%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K A +KLK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRARREKKSKKGCQEALEKLKKAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIE-------DVPQKKEKHDKRKKNKNIQNPNAKGDIQK 156
DWI DD G GYVEDGREIFDDD+E + + + H+K K+N +I+
Sbjct: 77 DWIVDDDGIGYVEDGREIFDDDLEDDVLDAGEKGKDGKAHNKDKRNLKKPAVTKPNNIKS 136
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNT-----TIAPTLKLNTKTN---------- 201
+ KK + V L+ DD+L D+L ++NT T P + L +T+
Sbjct: 137 MFIACAGKKTADKAVDLSKDDLLGDILQDLNTEKPQITPPPVMILKKRTSIGASLNPFSV 196
Query: 202 -----------EIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSN 250
+ ++EPP A F+ + + E+ ++E P++ E
Sbjct: 197 HTPTAVSSGKIAFHVSRKEPPLTPVPPKRAEFTGELVQAESTEE--EQESGPMEFEDGDF 254
Query: 251 DSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSI 310
D ME AE+ EPV W+Q E+ ++ +
Sbjct: 255 DEPME-----AEEVDLEPVAAKTWDQ--------------------------ESEPAEEV 283
Query: 311 EEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTAD 367
+++VD + S P V C W+ Q + S E QV S
Sbjct: 284 KQEVDPGK-----GTMSYLGSVFPDV------SC--WDVDQEGDSSFSVQEVQVDS---- 326
Query: 368 DSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRK 427
LPL + ++VF ++LDA+ED Y QPG V++FGKV+++ +H SCCV+V+NI+R
Sbjct: 327 SHLPLVKGADEEQVFHFYWLDAYEDQYNQPGVVFMFGKVWIESAETHVSCCVMVKNIERT 386
Query: 428 IYLLPRSEHL------KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGV 480
+Y LPR + +T+ PVS+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P V
Sbjct: 387 LYFLPREMKIDLNTGKETRTPVSMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDV 446
Query: 481 PDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
P+ SEYLEV+YSA+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE +
Sbjct: 447 PEKSEYLEVKYSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQL 506
Query: 541 FPSRISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEK 593
ISWCK E + + + + V +T+ ++ +NE + + A
Sbjct: 507 LNQPISWCKVEAMALKPDLVNVIKDVSPPPLVVMAFSMKTMRNAKNHQNEIIAIAALVHH 566
Query: 594 SYVL 597
S+ L
Sbjct: 567 SFAL 570
>gi|403263644|ref|XP_003924129.1| PREDICTED: DNA polymerase alpha catalytic subunit isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1468
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/702 (51%), Positives = 472/702 (67%), Gaps = 37/702 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 772 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKSQQKLGDEDEEIDG 831
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 832 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVAAE 891
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
IT E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDIR
Sbjct: 892 AQKITEDGEQEQIPELPDPNLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIR 951
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 952 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 1011
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + +
Sbjct: 1012 IMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTLD 1071
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1072 GNYVTKQELKGLDIVRRDWCDLAKDTGSFVIGQILSDQSR-----DTIVENIQKRLIEIG 1126
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+IC
Sbjct: 1127 ENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVIC 1186
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA LG
Sbjct: 1187 QDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLG 1246
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1247 LDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCRC--PTCGTENIYDN 1300
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
S + L C N +C P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1301 VFDGSGTDMEPSLYRCSNIDCNASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTCR 1360
Query: 1143 DLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
+ TR PL LC C K L Y++ LY QL F+ YI D+ AL K T K
Sbjct: 1361 NRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDVECALEKLTTDHEK 1420
Query: 1201 -------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1421 DKLKKQFLTPKVIQEYRKLKNTAEQFLSRSGYSEVNLSKLFA 1462
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 206/604 (34%), Positives = 302/604 (50%), Gaps = 101/604 (16%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K A +KLK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 24 ASRARREKKSKKGCQEALEKLKKAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDD 82
Query: 104 DWIDDDGGDGYVEDGREIFDDDIE-------DVPQKKEKHDKRKKNKNIQNPNAKGDIQK 156
DWI DD G GYVEDGREIFDDD+E + + + H+K K+N +I+
Sbjct: 83 DWIVDDDGIGYVEDGREIFDDDLEDDVLDAGEKGKDGKAHNKDKRNLKKPAVTKPNNIKS 142
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNT-----TIAPTLKLNTKTN---------- 201
+ KK + V L+ DD+L D+L ++NT T P + L +T+
Sbjct: 143 MFIACAGKKTADKAVDLSKDDLLGDILQDLNTEKPQITPPPVMILKKRTSIGASLNPFSV 202
Query: 202 -----------EIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSN 250
+ ++EPP A F+ + + E+ ++E P++ E
Sbjct: 203 HTPTAVSSGKIAFHVSRKEPPLTPVPPKRAEFTGELVQAESTEE--EQESGPMEFEDGDF 260
Query: 251 DSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSI 310
D ME AE+ EPV W+Q E+ ++ +
Sbjct: 261 DEPME-----AEEVDLEPVAAKTWDQ--------------------------ESEPAEEV 289
Query: 311 EEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTAD 367
+++VD + S P V C W+ Q + S E QV S
Sbjct: 290 KQEVDPGK-----GTMSYLGSVFPDV------SC--WDVDQEGDSSFSVQEVQVDS---- 332
Query: 368 DSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRK 427
LPL + ++VF ++LDA+ED Y QPG V++FGKV+++ +H SCCV+V+NI+R
Sbjct: 333 SHLPLVKGADEEQVFHFYWLDAYEDQYNQPGVVFMFGKVWIESAETHVSCCVMVKNIERT 392
Query: 428 IYLLPRSEHL------KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGV 480
+Y LPR + +T+ PVS+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P V
Sbjct: 393 LYFLPREMKIDLNTGKETRTPVSMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDV 452
Query: 481 PDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
P+ SEYLEV+YSA+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE +
Sbjct: 453 PEKSEYLEVKYSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQL 512
Query: 541 FPSRISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEK 593
ISWCK E + + + + V +T+ ++ +NE + + A
Sbjct: 513 LNQPISWCKVEAMALKPDLVNVIKDVSPPPLVVMAFSMKTMRNAKNHQNEIIAIAALVHH 572
Query: 594 SYVL 597
S+ L
Sbjct: 573 SFAL 576
>gi|62086801|dbj|BAD92007.1| DNA polymerase alpha catalytic subunit [Ambystoma mexicanum]
Length = 1409
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/702 (50%), Positives = 476/702 (67%), Gaps = 39/702 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK-------NKKEGEET 612
++ITN+ GNV+SRTLMGGRSERNE+LLLHAF+E ++++PDK K ++ E E
Sbjct: 713 LQITNIAGNVMSRTLMGGRSERNEYLLLHAFYENNFIVPDKPTFKKPLQNLVDEDEDIEN 772
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ + K RKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ R+
Sbjct: 773 DQGKQKKVRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQ-RL-- 829
Query: 673 DSDITTLCE--------YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
DS+ + E LP+ ++ GILP EI+KLVE RRQVK LMKQ +L+ DL MQY
Sbjct: 830 DSNAQKMPEGEEQDDIPQLPDPDLELGILPREIRKLVERRRQVKQLMKQSDLNPDLYMQY 889
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGD 784
DIRQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREILL+T+ +V+ +N EVIYGD
Sbjct: 890 DIRQKALKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILLHTRDMVQKMNLEVIYGD 949
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+MI+ N + + VFK+GN++KSE NKLYKQLE+DIDGV+K +LLLKKKKYAAL++
Sbjct: 950 TDSIMINTNSTNLEEVFKLGNKVKSEVNKLYKQLEIDIDGVFKSLLLLKKKKYAALTMEP 1009
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+GK + QE+KG+D+VRRDW LA E G ++I+QIL +Q D ++NI + +
Sbjct: 1010 AGDGKYVTKQELKGLDIVRRDWCDLAKETGNYIITQILSDQPR-----DTIVENIQKQLI 1064
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
+I ++ NG +P+ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY
Sbjct: 1065 EIGENVVNGSIPINQYEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKMKAGDTVSY 1124
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
IIC+DG++ +A+QRAY +E+L+ L ID YYLSQQ+HPVV R+ EPI+G D+ IA
Sbjct: 1125 IICQDGSNLSASQRAYALEQLQKQDNLAIDTQYYLSQQVHPVVARICEPIDGIDSALIAA 1184
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEV----KYQFCDKFEFTCMNPSCKQVNTV 1080
LGLD S +R ++ Q+ EEN +G ++ KY+ C++F+FTC P+C
Sbjct: 1185 WLGLDPSQFR--VQSHYQKDEENDAMLGGPSQITDEEKYKDCERFKFTC--PACGTEGIY 1240
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPG 1140
+ S + +L C PEC P ++ L NKL D+ ++I KYY W CE+P
Sbjct: 1241 DNAFDGSGALMEPILKRCCKPECDASPMHFVIQLQNKLHLDIRRHIKKYYSAWFICEEPT 1300
Query: 1141 CSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDI--TKALTKSDT 1196
C + TRR PL +C C K L Y + LY QL F+ YI D+ TK + SD
Sbjct: 1301 CQNRTRRLPLNFSRNGPICQACMKATLRPEYPDKALYTQLCFYRYIFDLEYTKEKSVSDV 1360
Query: 1197 -PSIKFDSE---TYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ D+E T + Y ++K V+R L SS Y+ V+L KLF
Sbjct: 1361 EKRLLKDAELDGTDVVYKRLKGTVDRCLSSSGYSEVNLAKLF 1402
Score = 247 bits (631), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 271/556 (48%), Gaps = 103/556 (18%)
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMP--- 162
I DD G GYVEDGREIFDDD++D K KK N KG+++K + + P
Sbjct: 1 IVDDDGVGYVEDGREIFDDDLQDDVASNSSAAKGKKG----NAQEKGNLKKPVVSKPNSI 56
Query: 163 --------VKKKKKEEVQLNNDDVLADLLSEVNTTI------------------------ 190
KK + V L+ DD+L D+L ++N
Sbjct: 57 KTMFMASAGKKTADKTVDLSKDDLLGDILQDINAAAPIISLPPVVALKKKRLAGVARNPF 116
Query: 191 ---APTLKLNT-----KTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSP 242
AP+LK+ +T ++ K P A+ SK V+++ PI E
Sbjct: 117 SVQAPSLKVTVPRPAVRTTPTLVTKPSPSIVPGSHTPAS-SKSFTVKQETIAPINAE--- 172
Query: 243 LKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQID--DWDNSQQTQDV--LPEQAKV 298
+ V + V E + E+ D G+ M D ++D + +D+ L Q +
Sbjct: 173 ---------NGRTVHVKVEEDTAED--DQGM---MDFDYLNFDEPMEAEDLNLLHSQTNI 218
Query: 299 ELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPS--- 355
+ E +S+ +++ E S ++L P+V C W E S
Sbjct: 219 AKKEEEHKSEERAKELKPVKEEMCSQTIQL-----PEV------SC--WGKTDQEDSEVV 265
Query: 356 TSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHS 415
++ QV S SLPL + +VFR ++LDA+ED Y QPG VYLFGKV+++ +H
Sbjct: 266 VTDVQVDS----SSLPLVIGTDGDQVFRFYWLDAYEDQYNQPGVVYLFGKVWIESAEAHV 321
Query: 416 SCCVIVQNIDRKIYLLPRSEHL------KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRK 468
SCC+ V+NI+R +YLLPR + +T PVS+ VY EF++ IA ++K++ FKS+K
Sbjct: 322 SCCLTVKNIERTVYLLPRETQVDLSSGKETGTPVSMMNVYQEFNERIAEKFKLMKFKSKK 381
Query: 469 IEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIK 528
IEK YAF +P VP SEYLEVRYSA+ P LP DL G+TFSHVFGT +S LE LL RKIK
Sbjct: 382 IEKNYAFEIPDVPANSEYLEVRYSAELPPLPKDLKGETFSHVFGTNTSSLELFLLSRKIK 441
Query: 529 GPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSER 581
GPSWLE + +SWCK E + + + + V + +T+ ++ +
Sbjct: 442 GPSWLEIKTPQLSFQPVSWCKVEAVALKPDLVSVVKDLPPPPLVVMALSMKTVQNAKTHQ 501
Query: 582 NEFLLLHAFHEKSYVL 597
NE + + + L
Sbjct: 502 NEIVAISVLAHHKFPL 517
>gi|329663230|ref|NP_001192994.1| DNA polymerase alpha catalytic subunit [Bos taurus]
gi|296470534|tpg|DAA12649.1| TPA: polymerase (DNA directed), alpha 1, catalytic subunit [Bos
taurus]
Length = 1462
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/703 (50%), Positives = 476/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQTFRKPQQKLGDEDEDIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAYSGGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 826 DTNKYKKGRKKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++++D + + E LP+ ++ GILP EI+KLVE RRQVK LMKQ +L+ DL +QYDI
Sbjct: 886 AQKVVEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRRQVKQLMKQQDLNPDLHLQYDI 944
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 945 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1004
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S
Sbjct: 1005 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALIVEPTS 1064
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +Q+ D ++NI + + +I
Sbjct: 1065 DGNYVTKQEVKGLDIVRRDWCDLAKDTGNFVIGQILSDQNR-----DTIVENIQKRLIEI 1119
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1120 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1179
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DA+ IA L
Sbjct: 1180 CQDGSNLTAGQRAYAPEQLQKQDNLSIDTQYYLAQQIHPVVARICEPIDGIDAILIASWL 1239
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEA---EEVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A +E KY+ C++F+ C P+C N +
Sbjct: 1240 GLDPTQFRVH---HYHKDEENDALLG-GPAHLTDEEKYKDCERFKCPC--PTCGTENIYD 1293
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ S + L C N CK P T++ L NKL D+ + I KYYEGWL CE+P C
Sbjct: 1294 SVLDGSGTDMEPSLYRCSNINCKASPLTFMVQLSNKLIMDIRRCIKKYYEGWLICEEPTC 1353
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYI----CDITKALTKSD 1195
+ TR PL LC C K L Y++ LY QL F+ YI C + K +T +
Sbjct: 1354 RNRTRHLPLQFSRNGPLCQVCMKATLRLEYSDKSLYTQLCFYRYIFDAECALEKLITDHE 1413
Query: 1196 TPSIK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+K F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1414 KDKLKKQFFTPKVLQDYRKLKNTAEQFLSQSGYSEVNLSKLFA 1456
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 308/591 (52%), Gaps = 65/591 (10%)
Query: 39 TQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVL 98
++ + R++R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V
Sbjct: 13 SRSLVASRSRREKKSKKGRQQALERLKRAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQ 71
Query: 99 KRQEDDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKN------------IQ 146
RQ+DDWI DD G GYVEDGREIFDDD+ED + H+K K NK +
Sbjct: 72 ARQDDDWIVDDDGIGYVEDGREIFDDDLED--DALDSHEKGKDNKACNKDKRTVKRAAVT 129
Query: 147 NPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT---TIAPTLKLNTKTNEI 203
PN +I+ + +K + V L+ DD+L D+L ++NT I P +
Sbjct: 130 KPN---NIKSMFIASAGRKTVDKAVDLSKDDLLGDILQDLNTETPQITPP--------PV 178
Query: 204 VIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPI-KKEPSPLKDEIKSNDSVMEVEMNVAE 262
+IPK++ + + + + K P ++EPS + + E +
Sbjct: 179 IIPKKKRSSGASLNPFSVHTPKAAPSGKTTPPASRREPSLTPAPLTCAEFAGEPGPPLCT 238
Query: 263 QSKEEPVDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVE 320
KEE G E + D+D + + DV P AK Q E ++ + K D
Sbjct: 239 DDKEE---SGAME-FEDGDFDEPMEAEEVDVEPVAAKTLCQ-EREPAEEAKHKADSGKGT 293
Query: 321 SVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKK 380
+ SSA L P V C W+ Q E +S + + LPL + ++
Sbjct: 294 TSSSASFL-----PDV------SC--WDMDQ-EDDSSFSALEVQVDSSHLPLVKGADEEQ 339
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL--- 437
VF+ ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R + LPR +
Sbjct: 340 VFQFYWLDAYEDPYSQPGVVFLFGKVWIESAETHVSCCVMVKNIERSLCFLPREMKVDLN 399
Query: 438 ---KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
++ PV++ VY EFD+ IA +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA
Sbjct: 400 TGKESGTPVTMKDVYDEFDEKIAAKYKIMKFKSKVVEKNYAFEIPDVPEKSEYLEVRYSA 459
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQ 553
+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E
Sbjct: 460 EMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKVEAM 519
Query: 554 CNQMEKIRITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + G V+S +T+ ++ NE + + A S+ L
Sbjct: 520 VLKPDLVNVIKDVGPPPVVVMSLSMKTMQNAKTHENEIIAVSALVHHSFAL 570
>gi|49618933|gb|AAT68051.1| DNA polymerase alpha [Danio rerio]
Length = 1389
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/649 (52%), Positives = 451/649 (69%), Gaps = 24/649 (3%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE--GE-ETGEAN 616
++ITN+ GNV+SRTLMGGRSERNE+LLLHAFHE+ +++PDKQ+ K ++ GE E G++
Sbjct: 746 LQITNIAGNVMSRTLMGGRSERNEYLLLHAFHERDFIVPDKQFFKKAQQDLGEDEEGDSG 805
Query: 617 KGKG---RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP-----V 668
KGK RKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 806 KGKSNKTRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVERGATNT 865
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
R + D + E LP+ ++ GILP EI+KLVE RRQVK LMK+P+L+ DL +QYDIRQ
Sbjct: 866 RKKTEEDEDEIPE-LPDQSLEMGILPKEIRKLVERRRQVKQLMKEPDLNPDLYLQYDIRQ 924
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
KALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS+
Sbjct: 925 KALKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKEMVQRMNLEVIYGDTDSI 984
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + +G
Sbjct: 985 MINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALMVEPQGDG 1044
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
K QE+KG+D+VRRDW LA E G +VI QIL +Q+ D ++NI +H+ +I
Sbjct: 1045 KYTTKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQNR-----DTIIENIQKHLIEIGE 1099
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE 968
+ NG +PL + EI K LTK P++Y D+K+LPHV VAL +N+ KK+K GDT+SY+IC+
Sbjct: 1100 KVANGNIPLNMFEIHKSLTKEPQDYPDKKSLPHVHVALWINSQGGKKVKAGDTVSYVICQ 1159
Query: 969 DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
DG++ AA+QRAY +E+L+ L +D YYLSQQ+HPVV R+ EPIEG DAV IA LGL
Sbjct: 1160 DGSNLAASQRAYTLEQLQKQPGLNLDTQYYLSQQVHPVVGRICEPIEGIDAVLIATWLGL 1219
Query: 1029 DTSLYRSQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL 1086
D S +R+Q ++ + ++ LG +E +Y+ C++F FTC P C N +
Sbjct: 1220 DPSHFRAQ-QQQREDEADDFLGAPAQLTDEERYRDCERFTFTC--PDCGTENIYDNVFEG 1276
Query: 1087 STHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
+ + L C + C P + + NKL D+ ++I +YY GWL CED C + R
Sbjct: 1277 TGSTLQLSLKSCCHVPCGGSPMDHQVQIGNKLQLDIRRHIRRYYSGWLLCEDQACRNRIR 1336
Query: 1147 RCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK 1193
R P+ +C C + L Y+E LY QLSF+ YI D A+ K
Sbjct: 1337 RLPIAFSRSGPICPACLRSTLKPEYSEKALYNQLSFYRYIFDWEYAINK 1385
Score = 279 bits (713), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 204/582 (35%), Positives = 317/582 (54%), Gaps = 58/582 (9%)
Query: 39 TQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVL 98
T + R++R+K +K + +A ++LK K +G K KYE ++Y+EV E++Y++ V
Sbjct: 7 TCGIAASRSRREKKEKVGRKSALEQLKRAK-KGEKVKYEVEEFTSIYDEVDEEQYSKIVR 65
Query: 99 KRQEDDWIDDDGGDGYVEDGREIFDDDIED---VPQKKE--KHDKRKKN---KNIQNPNA 150
+RQ+DDWI DD G GYVEDGREIFD++++D P+ K+ K KKN ++ PN+
Sbjct: 66 ERQDDDWIIDDDGTGYVEDGREIFDEELDDDALGPKSKQAAKGGDSKKNVKKSSVSKPNS 125
Query: 151 KGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEP 210
I+ + N VKK ++ V L+ DD+L D+L + L+++ + ++ P P
Sbjct: 126 ---IKSMFMNSNVKKPAEKHVDLSQDDLLGDILQD----------LHSEKSVVLTP---P 169
Query: 211 PAPT--AKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEP 268
P T K+ L + P V K + P K P P D + + +E A Q K+
Sbjct: 170 PIITLKKKKTLGSPMNPFSV--KPQMPKVKIPIPPADPSPRSAASVEPSKATAAQIKKPK 227
Query: 269 VDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVEL 328
+++ E ++ D+ D + ++ E +E + ++EK + V VE
Sbjct: 228 IEEPEEEAIEFDEMDFDE------------PMEAENLEEEPVKEKAEPETKPIVK--VEP 273
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
T P +++ WE ++ E E V + LPL + VFR ++LD
Sbjct: 274 KTEPQDKMLISGLVGGMGWEKME-EGKPIETPVEVQVDSSQLPLVEGPDGDMVFRFYWLD 332
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH---LKTKE---P 442
AFED Y QPG V+LFGKV+++ +H SCCV V+NI+R +YLLPR EH L T E
Sbjct: 333 AFEDQYNQPGVVFLFGKVWIESAEAHVSCCVAVKNIERTMYLLPR-EHKVNLATGEKGVA 391
Query: 443 VSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDL 502
V + VY EF++I+ ++KI+ FKS+ + K YAF +P +P SEYLEV+YSA+ P+LPSDL
Sbjct: 392 VGMMDVYKEFNEISEKFKIMKFKSKPVTKNYAFEIPDIPSQSEYLEVKYSAEIPSLPSDL 451
Query: 503 SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
G TFSHVFGT +S LE+ LL RKI+GP WL+ + ISWCK E + + I +
Sbjct: 452 KGTTFSHVFGTNTSSLEHFLLNRKIRGPCWLDVTTPQLSNQPISWCKVEAVAQKSDLISV 511
Query: 563 TN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
V ++ +T+ ++ +NE + + A ++ L
Sbjct: 512 VKDLSPPPLVVMSISLKTVQNPKTHQNEIVSIAALVHHTFPL 553
>gi|194227748|ref|XP_001494822.2| PREDICTED: DNA polymerase alpha catalytic subunit isoform 2 [Equus
caballus]
Length = 1418
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/709 (50%), Positives = 478/709 (67%), Gaps = 51/709 (7%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 722 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEDIDG 781
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 782 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 841
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
R+ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 842 AQRVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 900
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 901 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 960
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE N+LYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 961 SIMINTNSTNLEEVFKLGNKVKSEVNRLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1020
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1021 DGNYFTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1075
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1076 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1135
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1136 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1195
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1196 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1249
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ S + L C N +CK P T++ L NKL D+ + I KYYEGWL CE+P C
Sbjct: 1250 SVFDGSGKDMEPSLYRCSNIDCKASPLTFMVQLSNKLIMDIRRCIKKYYEGWLICEEPTC 1309
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL-------- 1191
+ TR PL LC C K L Y++ LY QL F+ YI D+ AL
Sbjct: 1310 RNRTRHLPLQFSRNGPLCQVCMKAVLRPEYSDKSLYTQLCFYRYIFDVDCALEKLITDHE 1369
Query: 1192 -----TKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
T+ TP ++ D Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1370 KEKLKTQYLTPRVRED------YKKLKSTAEQFLSRSGYSEVNLSKLFA 1412
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 244/464 (52%), Gaps = 38/464 (8%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRSRREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQK 156
DWI DD G GYVEDGREIFDDD+ED + K K +N N K I+
Sbjct: 77 DWIVDDDGIGYVEDGREIFDDDLEDDALDSHEKGKDDKARNKDKRNVKKAVVTRPNSIKS 136
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK 216
+ +K + V L+ DD+L D+L ++N+ P + T +++ K+ +
Sbjct: 137 MFMASAGRKTADKAVDLSKDDLLGDILQDLNSE-PPQI---TPPPVMILKKKRSTGASLN 192
Query: 217 EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQ 276
+ + K + K +KEPS +K + E + + KEE
Sbjct: 193 PFSVHTPKAVPSGKTASAVSRKEPSLTPVALKRAEFAGEPVLALCTDEKEES------GA 246
Query: 277 MQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSI-EEKVDVTNVESVSSAVELSTSPPPQ 335
M +D D + P A VE+ +E + +++ +E+ V+ + + +TS
Sbjct: 247 MDFEDGDFDE------PMDA-VEVDMETVAAKTWDQEREPAEGVKHEADPGKGTTS---- 295
Query: 336 VVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYK 395
+E + W+ Q + S+ Q + + LPL + ++VF+ ++LDA+ED Y
Sbjct: 296 YLESFLPDVSCWDIDQEDDSSFSAQ-EVQVDSNHLPLVKGADEEQVFQFYWLDAYEDQYN 354
Query: 396 QPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPVSIAQVY 449
QPG V+LFGKV+++ ++ SCCV+V+NI+R +Y LP + +T PV + VY
Sbjct: 355 QPGVVFLFGKVWIELAETYVSCCVMVKNIERTLYFLPCETKIDLNTGKETGTPVRMKDVY 414
Query: 450 SEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYS 492
EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYS
Sbjct: 415 DEFDEKIATKYKIMKFKSKIVEKNYAFEIPDVPEKSEYLEVRYS 458
>gi|348561319|ref|XP_003466460.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha catalytic
subunit-like [Cavia porcellus]
Length = 1472
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/707 (50%), Positives = 480/707 (67%), Gaps = 43/707 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEE----TG 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 772 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEEEEIDG 831
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV---- 668
+ +K KGRKKAAYSGGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 832 DTSKYKKGRKKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 891
Query: 669 --RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
+ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL +QYDI
Sbjct: 892 LQKAAEDGEEEQIPE-LPDASLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLALQYDI 950
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 951 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTFKGREILMHTKEMVQKMNLEVIYGDTD 1010
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1011 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPAS 1070
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +Q+ D ++NI + + +I
Sbjct: 1071 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQNR-----DTIVENIQKRLIEI 1125
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1126 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQAGRKVKAGDTVSYVI 1185
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ +A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DA IA L
Sbjct: 1186 CQDGSNLSASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAALIATWL 1245
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C+KF+ C P+C N +
Sbjct: 1246 GLDPAQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCEKFKCPC--PACGTENIYD 1299
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ S + L C N +CK P T++ L N+L D+ + I KYY+GWL CE+P C
Sbjct: 1300 SVFDGSGTDMEPSLYRCSNIDCKASPLTFVVQLSNRLIMDIRRCIKKYYDGWLLCEEPTC 1359
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYI----CDITKALTKSD 1195
+ TR PL LC C K L Y++ LY QL F+ YI C + K +T +
Sbjct: 1360 RNRTRHLPLQFSRSGPLCPACMKAVLRPEYSDKSLYTQLCFYRYIFDADCALEKLITDHE 1419
Query: 1196 TPSIKFDS-------ETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
++K+ S + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1420 KGTLKYXSMKQFLTPKVRQDYKKLKNTAEKFLSRSGYSEVNLSKLFA 1466
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 208/583 (35%), Positives = 315/583 (54%), Gaps = 59/583 (10%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 24 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDD 82
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDK-----RKKNKNIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD++D + K K KN++ P +I+
Sbjct: 83 DWIVDDDGIGYVEDGREIFDDDLDDDAFDTSEKGKDGKTYNKDKKNVKKPTVTKPNNIKS 142
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNT---TIAPTLKLNTKTNEIVIPKEEPPAP 213
+ KK + V L+ DD+L D+L ++NT I P L +VIPK++
Sbjct: 143 MFIASAGKKTADKAVDLSKDDLLGDILQDLNTETPQITPPL--------VVIPKKKRSIR 194
Query: 214 TAKEYLANFSKPIKVEKKIEKPI-KKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDG 272
++ + + + K P +KEP +K + V E+ E P D+
Sbjct: 195 ASQNPFSVHTPKVIPSGKTASPAPRKEPPLTAVPLKPAEFVGEL------MQPEHPEDEQ 248
Query: 273 LWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVD-VTNVESVSSAVELSTS 331
M+ +D D + P +A+ E+ +E + +++ +++ + V+ + + TS
Sbjct: 249 ESGVMEFEDNDFDE------PLEAE-EMNMEPVAAKTWDQQSEPAEGVKHKADPKKGMTS 301
Query: 332 PPPQVVEKKEHKCAEWEAIQTEP---STSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
V+ + C W+ Q + S E QV S LPL + +VF+ ++LD
Sbjct: 302 SLGSVL--PDVSC--WDIDQEDDISFSAQEVQVDS----SQLPLVKGADEDQVFQFYWLD 353
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEP 442
A+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P
Sbjct: 354 AYEDQYNQPGVVFLFGKVWIESAKTHVSCCVMVKNIERMLYFLPREMKIDSNTGKETGTP 413
Query: 443 VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
V++ VY EFD+ IA +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+ P LP D
Sbjct: 414 VTMKDVYDEFDERIANKYKIMKFKSKVLEKNYAFEIPDVPEKSEYLEVRYSAEMPQLPQD 473
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
L G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK+E + + +
Sbjct: 474 LKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKFEAVALKPDLVT 533
Query: 562 ITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+ G V+S +T+ ++ +NE + + A S++L
Sbjct: 534 VVKDVGPPPLVVMSFSMKTMQNAKNHQNEIIAIAALVHHSFML 576
>gi|194899426|ref|XP_001979261.1| GG14396 [Drosophila erecta]
gi|190650964|gb|EDV48219.1| GG14396 [Drosophila erecta]
Length = 1488
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/691 (49%), Positives = 470/691 (68%), Gaps = 33/691 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGE 614
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK + E +G
Sbjct: 788 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKKPVSKRSAAGDSEATLSGA 847
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ +KKAAY+GGLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT+ + D
Sbjct: 848 DATLQTKKKAAYAGGLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPVDADE 907
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
T LP+ + + GILP ++K+LVESR++VK LM P+LS +L MQY IRQ ALKLT
Sbjct: 908 LPT-----LPDSKTEAGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLT 962
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF +SRFFAQ LAALVT KGREIL +T+ LV+ LNY+V+YGDTDSLMI+ N+
Sbjct: 963 ANSMYGCLGFAHSRFFAQHLAALVTHKGREILTSTQQLVQKLNYDVVYGDTDSLMINTNI 1022
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK S G + Q
Sbjct: 1023 TDYDQVYKIGHSIKQSVNKLYKQLELDIDGVFGCLLLLKKKKYAAVKLSKDSKGNLRREQ 1082
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+ + G
Sbjct: 1083 EHKGLDIVRRDWSQLAVMVGKAVLDEVLSEK-----PLEEKLDAVHAQLEKIKNQIAEGV 1137
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
VPL L ITKQLT+ P+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT+ A
Sbjct: 1138 VPLPLFVITKQLTRTPQEYANSASLPHVQVALRMNRERNRRYKKGDMVDYVICLDGTTNA 1197
Query: 975 ATQRAYNIEELKN--NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
A QRAY+++ELK + KL++D NYYL QIHPVVTR++E +EGTDA RIAECLG+D +
Sbjct: 1198 AMQRAYHLDELKTSEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPTK 1257
Query: 1033 YRSQI----KESIQQSE-ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQV-NTVEAPTRL 1086
+R +E+ +QSE E++L + Y+ C+ F F C+ +Q+ T P
Sbjct: 1258 FRQNAQRTQRETTEQSEGESLL---KTTLQLYRLCEPFRFQCVTCKTEQLMATAYRPGPS 1314
Query: 1087 STHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
++H + VL +C N EC+ P YL + N+L M +Y+ ++Y+ WL C+ P C+ TR
Sbjct: 1315 NSH--IAVLQQCANSECQTAPIQYLASVRNRLQLSMRQYVQRFYKNWLVCDHPDCNFNTR 1372
Query: 1147 RCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE 1204
L +K+ LC C L R Y+E LY QL + ++ D+ K T P++ E
Sbjct: 1373 THSLRMKSHRPLCQKCRSGSLLRQYSERDLYNQLCYLRFMFDLGKQ-TLQQKPTLT--PE 1429
Query: 1205 TYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
Y + + V++ L+SS+Y I+ L KLF+
Sbjct: 1430 LEQAYQLLYETVDQQLQSSSYVIISLSKLFA 1460
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 289/610 (47%), Gaps = 102/610 (16%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RAKRQ++DK +FAA ++L+ LKG K + E ++VY+ V E+EY +R ++ DDW
Sbjct: 9 RAKRQRVDKNGRFAAMERLRQLKGTKNKCQVE-DQVDDVYDVVDEREYAKRAQEKYGDDW 67
Query: 106 IDDDGGDGYVEDGREIFDDDIE-DVPQKKEKHDKRKKN---KNIQNP-------NAKGDI 154
I++DG GY ED R+ F+D+ E + KH K+KK + + P K I
Sbjct: 68 IEEDGT-GYAEDLRDFFEDEDEYSDGEADRKHSKKKKGVAPNSKKRPREAEKAVTGKASI 126
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT-TIAPTLKLN--TKTNEIVIPKEEPP 211
+ L +N V KK + + +DD+LAD+L E+ AP+ K ++ + +
Sbjct: 127 KNLFSNA-VPKKMDVKNSVKDDDILADILGEIKEEPAAPSEKAEKVIAPAKVAVTSRKFD 185
Query: 212 APTAKEYLANFSKPIKVEK----------------KIEKP----------------IKKE 239
A AKEY+ +F IKV++ +I KP IKKE
Sbjct: 186 AAAAKEYMNSFLNNIKVQEQERKKAEASSDNEMLDRILKPKAAVPNTKVAFFSSPTIKKE 245
Query: 240 PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVE 299
P+P E A+++ E+ D +M D+ + DV E+ ++E
Sbjct: 246 PAP--------------EKTPAKKATEDAFSDN---EMDFSCLDDDENQFDV--EKTQLE 286
Query: 300 LQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEP 359
++ ++ +++ K + S E SP E WE+I E
Sbjct: 287 EKVFPTKTTAVK-KSQAKVAGNASPKKETGGSPKESESEDISRLLNNWESICQMDDDFEK 345
Query: 360 QVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCV 419
V T + +++D + R ++ +A+ED K PG V+LFG+ S C+
Sbjct: 346 SV--LTTEQESTISSDQQ----LRFWYWEAYEDPVKMPGEVFLFGRT-----ADGKSVCL 394
Query: 420 IVQNIDRKIYLLPRSEHLK------TKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKK 472
VQNI+R +YLLPR L TK+ V++A +Y EFD ++A Q K+ F+SRK+ K
Sbjct: 395 RVQNINRVLYLLPRQFLLDPISKEPTKQKVTVADIYKEFDSEVANQLKLEFFRSRKVTKS 454
Query: 473 YAFNLPG--VPDLSEYLEVRYSAK--CPALPSDLSGDTFSHVFGTKSSFLENLLLERKIK 528
+A + G VP +YLEV Y K P L ++ ++ +H+FG ++ LE LL+RKIK
Sbjct: 455 FAHHSIGIEVPQTCDYLEVHYDGKKPLPNLSANKKYNSIAHIFGATTNALERFLLDRKIK 514
Query: 529 GPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLS-----------RTLMGG 577
GP WL+ + P+ +SWC EV + + + + G RT M
Sbjct: 515 GPCWLQVTGFKVNPAPMSWCNTEVTLTEPKNVELVQDKGKPAPPPPLTLLALNVRTSMNP 574
Query: 578 RSERNEFLLL 587
++ RNE ++
Sbjct: 575 KTSRNEICMI 584
>gi|24648780|ref|NP_536736.2| DNA polymerase alpha 180kD [Drosophila melanogaster]
gi|45644974|sp|P26019.2|DPOLA_DROME RecName: Full=DNA polymerase alpha catalytic subunit
gi|23171902|gb|AAF55908.2| DNA polymerase alpha 180kD [Drosophila melanogaster]
Length = 1488
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/708 (49%), Positives = 474/708 (66%), Gaps = 33/708 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGE 614
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK + G + +G
Sbjct: 788 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKKPVSKRSGAGDTDATLSGA 847
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ +KKAAY+GGLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT+ + D
Sbjct: 848 DATMQTKKKAAYAGGLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPVDADE 907
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
T LP+ + + GILP ++K+LVESR++VK LM P+LS +L MQY IRQ ALKLT
Sbjct: 908 LPT-----LPDSKTEPGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLT 962
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF +SRFFAQ LAALVT KGREIL NT+ LV+ +NY+V+YGDTDSLMI+ N+
Sbjct: 963 ANSMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQKMNYDVVYGDTDSLMINTNI 1022
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK S G + Q
Sbjct: 1023 TDYDQVYKIGHNIKQSVNKLYKQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQ 1082
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+T + G
Sbjct: 1083 EHKGLDIVRRDWSQLAVMVGKAVLDEVLSEK-----PLEEKLDAVHAQLEKIKTQIAEGV 1137
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
VPL L ITKQLT+ P+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT+ A
Sbjct: 1138 VPLPLFVITKQLTRTPQEYANSASLPHVQVALRMNRERNRRYKKGDMVDYVICLDGTTNA 1197
Query: 975 ATQRAYNIEELKN--NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
A QRAY+++ELK + KL++D NYYL QIHPVVTR++E +EGTDA RIAECLG+D +
Sbjct: 1198 AMQRAYHLDELKTSEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPTK 1257
Query: 1033 YRSQI----KESIQQSE-ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
+R +E+ +QSE E++L Y+ C+ F F C+ +CK + + R
Sbjct: 1258 FRQNAQRTQRENTEQSEGESLLKTTLQ---LYRLCEPFRFQCV--TCKTEQLMASAYRPG 1312
Query: 1088 -THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
++ + VL +C EC+ P YL + N+L M +Y+ ++Y+ WL C+ P C+ TR
Sbjct: 1313 PSNSHIAVLQQCAKSECQTAPIQYLASVRNQLQLSMRQYVQRFYKNWLVCDHPDCNFNTR 1372
Query: 1147 RCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE 1204
L K+ LC C L R YTE LY QL + ++ D+ K T P++ E
Sbjct: 1373 THSLRKKSHRPLCQKCRSGSLLRQYTERDLYNQLCYLRFMFDLGKQ-TLQQKPTLT--PE 1429
Query: 1205 TYMGYCKMKQHVERFLESSAYNIVDLKKLFSCEEKQPKLSRGVEREHV 1252
Y + + V++ L+SS+Y I+ L KLF+ Q L V + +
Sbjct: 1430 LEQAYQLLYETVDQQLQSSSYVIISLSKLFARSLAQMSLQPSVAQPQI 1477
Score = 213 bits (543), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 187/627 (29%), Positives = 296/627 (47%), Gaps = 117/627 (18%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RAKRQ++DK +FAA ++L+ LKG K K E ++VY+ V E+EY +R ++ DDW
Sbjct: 9 RAKRQRVDKNGRFAAMERLRQLKGTKNKCKVE-DQVDDVYDVVDEREYAKRAQEKYGDDW 67
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKK-----------NKNIQNPNAKGDI 154
I++DG GY ED R+ F+D+ E ++++ D +KK +N + K I
Sbjct: 68 IEEDGT-GYAEDLRDFFEDEDEYSDGEEDRKDSKKKKGVAPNSKKRPRENEKPVTGKASI 126
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKT---NEIVIPKEEPP 211
+ L +N V KK + + +DD+LAD+L E+ A T + K +I + +
Sbjct: 127 KNLFSNA-VPKKMDVKTSVKDDDILADILGEIKEEPAATSEKAEKVIAPAKISVTSRKFD 185
Query: 212 APTAKEYLANFSKPIKVEK----------------KIEKP----------------IKKE 239
A AKEY+ +F IKV++ +I KP IKKE
Sbjct: 186 AAAAKEYMNSFLNNIKVQEQERKKAEASSDNEMLERILKPKAAVPNTKVAFFSSPTIKKE 245
Query: 240 PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDN------SQQTQDVLP 293
P P E A+++ E+P D + +DD +N +QQT+ V
Sbjct: 246 PMP--------------EKTPAKKATEDPFSDNEMDFSCLDDDENQFDVEKTQQTEKV-- 289
Query: 294 EQAKVELQIEAIESQSIEEKVDVTNV-ESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQT 352
++++ EK + V E + E + SP E WE+I
Sbjct: 290 -----------SQTKTAAEKTSQSKVAEKSAPKKETTGSPKESESEDISRLLNNWESICQ 338
Query: 353 EPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENN 412
E V + D ++ ++D + R ++ +A+ED K PG V+LFG+
Sbjct: 339 MDDDFEKSVLTTEQDSTI--SSDQQ----LRFWYWEAYEDPVKMPGEVFLFGRT-----A 387
Query: 413 SHSSCCVIVQNIDRKIYLLPRSEHLK------TKEPVSIAQVYSEFD-QIATQYKILDFK 465
S C+ VQNI+R +YLLPR L TK+ V++A +Y EFD ++A Q K+ F+
Sbjct: 388 DGKSVCLRVQNINRVLYLLPRQFLLDPISKEPTKQKVTVADIYKEFDSEVANQLKLEFFR 447
Query: 466 SRKIEKKYAFNLPG--VPDLSEYLEVRYSAK--CPALPSDLSGDTFSHVFGTKSSFLENL 521
SRK+ K +A + G VP +YLEV Y K P L +D ++ +H+FG ++ LE
Sbjct: 448 SRKVTKSFAHHAIGIEVPQSCDYLEVHYDGKKPLPNLSADKKYNSIAHIFGATTNALERF 507
Query: 522 LLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLS---------- 571
LL+RKIKGP WL+ + P+ +SWC EV + + + + G
Sbjct: 508 LLDRKIKGPCWLQVTGFKVSPTPMSWCNTEVTLTEPKNVELVQDKGKPAPPPPLTLLSLN 567
Query: 572 -RTLMGGRSERNEFLLLHAF-HEKSYV 596
RT M ++ RNE ++ H + ++
Sbjct: 568 VRTSMNPKTSRNEICMISMLTHNRFHI 594
>gi|440910592|gb|ELR60375.1| DNA polymerase alpha catalytic subunit, partial [Bos grunniens mutus]
Length = 1455
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/703 (50%), Positives = 475/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 759 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQTFRKPQQKLGDEDEDIDG 818
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAYSGGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 819 DTNKYKKGRKKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 878
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++++D + + E LP+ + GILP EI+KLVE RRQVK LMKQ +L+ DL +QYDI
Sbjct: 879 AQKVVEDGEQEQIPE-LPDPSLGMGILPREIRKLVERRRQVKQLMKQQDLNPDLHLQYDI 937
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 938 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 997
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S
Sbjct: 998 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALIVEPTS 1057
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +Q+ D ++NI + + +I
Sbjct: 1058 DGNYVTKQEVKGLDIVRRDWCDLAKDTGNFVIGQILSDQNR-----DTIVENIQKRLIEI 1112
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1113 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1172
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DA+ IA L
Sbjct: 1173 CQDGSNLTAGQRAYAPEQLQKQDNLSIDTQYYLAQQIHPVVARICEPIDGIDAILIASWL 1232
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEA---EEVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A +E KY+ C++F+ C P+C N +
Sbjct: 1233 GLDPTQFRVH---HYHKDEENDALLG-GPAHLTDEEKYKDCERFKCPC--PTCGTENIYD 1286
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ S + L C N CK P T++ L NKL D+ + I KYYEGWL CE+P C
Sbjct: 1287 SVLDGSGTDMEPSLYRCSNINCKASPLTFMVQLSNKLIMDIRRCIKKYYEGWLICEEPTC 1346
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYI----CDITKALTKSD 1195
+ TR PL LC C K L Y++ LY QL F+ YI C + K +T +
Sbjct: 1347 RNRTRHLPLQFSRNGPLCQVCMKATLRLEYSDKSLYTQLCFYRYIFDAECALEKLITDHE 1406
Query: 1196 TPSIK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+K F + Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1407 KDKLKKQFFTPKVLQDYRKLKNTAEQFLSQSGYSEVNLSKLFA 1449
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 308/591 (52%), Gaps = 65/591 (10%)
Query: 39 TQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVL 98
++ + R++R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V
Sbjct: 6 SRSLVASRSRREKKSKKGRQQALERLKRAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQ 64
Query: 99 KRQEDDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKN------------IQ 146
RQ+DDWI DD G GYVEDGREIFDDD+ED + H+K K NK +
Sbjct: 65 ARQDDDWIVDDDGIGYVEDGREIFDDDLED--DALDSHEKGKDNKACNKDKRTVKRAAVT 122
Query: 147 NPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT---TIAPTLKLNTKTNEI 203
PN +I+ + +K + V L+ DD+L D+L ++NT I P +
Sbjct: 123 KPN---NIKSMFIASAGRKTVDKAVDLSKDDLLGDILQDLNTETPQITPP--------PV 171
Query: 204 VIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPI-KKEPSPLKDEIKSNDSVMEVEMNVAE 262
+IPK++ + + + + K P ++EPS + + E +
Sbjct: 172 IIPKKKRSSGASLNPFSVHTPKAAPSGKTTPPASRREPSLTPAPLTCAEFAGEPGPPLCT 231
Query: 263 QSKEEPVDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVE 320
KEE G E + D+D + + DV P AK Q E ++ + K D
Sbjct: 232 DDKEE---SGAME-FEDGDFDEPMEAEEVDVEPVAAKTLCQ-EREPAEEAKHKADSGKGT 286
Query: 321 SVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKK 380
+ SSA L P V C W+ Q E +S + + LPL + ++
Sbjct: 287 TSSSASFL-----PDV------SC--WDMDQ-EDDSSFSALEVQVDSSHLPLVKGADEEQ 332
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL--- 437
VF+ ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R + LPR +
Sbjct: 333 VFQFYWLDAYEDPYSQPGVVFLFGKVWIESAETHVSCCVMVKNIERSLCFLPREMKVDLN 392
Query: 438 ---KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
++ PV++ VY EFD+ IA +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA
Sbjct: 393 TGKESGTPVTMKDVYDEFDEKIAAKYKIMKFKSKVVEKNYAFEIPDVPEKSEYLEVRYSA 452
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQ 553
+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E
Sbjct: 453 EMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKVEAM 512
Query: 554 CNQMEKIRITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + G V+S +T+ ++ NE + + A S+ L
Sbjct: 513 VLKPDLVNVIKDVGPPPVVVMSLSMKTMQNAKTHENEIIAVSALVHHSFAL 563
>gi|195396107|ref|XP_002056674.1| GJ11070 [Drosophila virilis]
gi|194143383|gb|EDW59786.1| GJ11070 [Drosophila virilis]
Length = 1481
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/691 (49%), Positives = 464/691 (67%), Gaps = 32/691 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE-------- 611
++ITN+CGN ++RTL GGRSERNE+LLLHAFHEK+Y++PDK + G +
Sbjct: 780 LQITNICGNTMTRTLQGGRSERNEYLLLHAFHEKNYIVPDKLPARRVAAGADPDATSQDT 839
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML 671
T A G RKKAAY+GGLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT+
Sbjct: 840 TVAAGAGAVRKKAAYAGGLVLEPIRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQ---- 895
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
Q D L LP+ + GILP ++++LVESRR+VK LM P+L+++L MQY IRQ AL
Sbjct: 896 QPHDAEQL-PTLPDSSAEPGILPLQLRRLVESRREVKKLMAAPDLAAELHMQYHIRQMAL 954
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLGF +SRFFAQ LAALVT KGREIL+NT+ LV+ LNY+V+YGDTDSLMI+
Sbjct: 955 KLTANSMYGCLGFAHSRFFAQHLAALVTHKGREILVNTQQLVQKLNYDVVYGDTDSLMIN 1014
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
N+ DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK + G ++
Sbjct: 1015 TNITDYDQVYKIGHTIKQSVNKLYKQLELDIDGVFACLLLLKKKKYAAVKLSKNAKGVLL 1074
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
QE KG+D+VRRDWSQLA GK V+ ++L D L+D+L+ +H + +I+ +
Sbjct: 1075 REQEHKGLDIVRRDWSQLAVMVGKAVLDEVL-----ADKPLEDKLEAVHAQLGRIKEQIT 1129
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
VPL L ITKQLT+AP+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT
Sbjct: 1130 QSAVPLPLYVITKQLTRAPQEYANSSSLPHVQVALRMNRERNRRYKKGDMVDYVICLDGT 1189
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
+ AA QRAY++EELK + L++D NYYLS QIHPVVTR++E +EGTDA RIAECLG+D S
Sbjct: 1190 TNAAMQRAYHLEELKGSESLQLDTNYYLSHQIHPVVTRMVEVLEGTDASRIAECLGMDAS 1249
Query: 1032 LYRSQIKESIQQSEENILG--VGEAEEVKYQFCDKFEFTCMNPSCKQ---VNTVEAPTRL 1086
YR + ++ E G + + Y+ C+ F F C+ +CK + + P
Sbjct: 1250 KYRQNAQRIQRERTEEADGESLQKTTLQLYRLCEPFRFKCV--ACKTEQLMASAYRPGPN 1307
Query: 1087 STHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
S+H V VL +C+N EC+ P YL + N+L M Y+ ++Y WL C+ P C+ TR
Sbjct: 1308 SSH--VPVLQQCVNSECQTSPLQYLVSIRNQLQLCMRGYVQRFYRNWLVCDHPDCNYNTR 1365
Query: 1147 RCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE 1204
+ L+ R LC C+ + R Y+E LY QL + ++ D+ K + P++ E
Sbjct: 1366 SYSVRLEMRRPLCLKCNSGAMLRQYSERDLYNQLCYLRFMFDLNKQQLQQ-KPTLT--PE 1422
Query: 1205 TYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
Y + VE+ + S+Y ++ L +F+
Sbjct: 1423 LEQAYQLLHDTVEQQFQCSSYVVISLGNIFA 1453
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 277/556 (49%), Gaps = 54/556 (9%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
G R KRQ+IDKT +FAA ++L+ LKG K + E D+ VYE V E+EY +R ++
Sbjct: 7 GPRVKRQRIDKTGRFAALERLRGLKGTKNKCQVEEKVDD-VYEVVDEREYAKRANEKYGG 65
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDK----------RKKNKNIQNPNAKGD 153
DWI+DDG GY EDGR+ F+D+ + ++ + D R ++ + K
Sbjct: 66 DWIEDDGT-GYAEDGRDFFEDEDDYSDNEQGQSDGKKNKAGNGKKRSRDSDTGPAKGKAS 124
Query: 154 IQKLLAN-MPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKE---- 208
I+ L +N +P K K V+ +DD+LAD+L E+ A + ++++ P +
Sbjct: 125 IRNLFSNALPKKTDIKNSVK--DDDILADILGEIKEEPAGDAASTPRQHKVIAPAKIMAA 182
Query: 209 --EPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNV------ 260
+ A AKEY+ +F IK +++ K + D I S M
Sbjct: 183 TRKSDAAAAKEYMNSFLSNIKKQEQQRKKDAGSDDEMLDRILQPKSAMLPNKKATPVTPA 242
Query: 261 AEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVE 320
A + K+EPV + EQ + + T ++ P+ +L ++ E + ++ +
Sbjct: 243 AVKVKQEPVTETAAEQPRKK---AREGTPELCPDN---DLDFSCLDDD--ENQFELAASK 294
Query: 321 SVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKK 380
+ + S PP Q + + WE+I E + A+ +L +D + +
Sbjct: 295 AQPELLPASAGPPKQEADDMSKLLSNWESICQMDDDFERSALASEAETAL--GSDPGDVE 352
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK-- 438
R ++ +A+ED K PG V+LFG+ S CV VQNI+R +YLLPR L
Sbjct: 353 QLRFWYWEAWEDAIKLPGEVFLFGRT-----PDGKSICVRVQNINRVLYLLPRQYLLDPI 407
Query: 439 TKEP----VSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPG--VPDLSEYLEVRY 491
TKEP V+ A +Y EFD IAT+ K+ F+SRK+ K +A + G VP +YLEV Y
Sbjct: 408 TKEPTKQKVTAADMYKEFDTHIATELKLDTFRSRKVSKSFANHAIGIEVPQTCDYLEVHY 467
Query: 492 SAKCPALPS--DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
K PA P+ + D+ +H+FG ++ LE LLERKIKGP WL+ P+ +SWCK
Sbjct: 468 DGKKPA-PNMQNKKYDSIAHIFGASTNALERFLLERKIKGPCWLQISGFNVNPAPLSWCK 526
Query: 550 YEVQCNQMEKIRITNV 565
+V + + + + V
Sbjct: 527 TDVTVGEPKNVELVLV 542
>gi|395838110|ref|XP_003791967.1| PREDICTED: DNA polymerase alpha catalytic subunit [Otolemur
garnettii]
Length = 1461
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/710 (50%), Positives = 477/710 (67%), Gaps = 45/710 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN--KKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPPQKLGDEDEEIDG 825
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
+ KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ L+
Sbjct: 826 DTKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVALEA 885
Query: 674 SDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
T E LP+ ++ GILP EI+KLVE R+QV+ LMKQ +L+ DLL+QYDIRQ
Sbjct: 886 KKATEDVEQEQIPELPDPGLEMGILPREIRKLVERRKQVRQLMKQQDLNPDLLLQYDIRQ 945
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
KALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS+
Sbjct: 946 KALKLTANSMYGCLGFSFSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSI 1005
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
MI+ N + + VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + S+G
Sbjct: 1006 MINTNSTNLEEVFKLGNKVKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDG 1065
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
QE+KG+D++RRDW LA + G FVI QIL +QS D +++I + + +I
Sbjct: 1066 NYFTKQELKGLDIIRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVESIQKRLMEIGE 1120
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE 968
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+IC+
Sbjct: 1121 NVLNGCVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKMKAGDTVSYVICQ 1180
Query: 969 DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
DG++ +A QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G D+V IA LGL
Sbjct: 1181 DGSNLSANQRAYAPEQLQKQDSLTIDTQYYLAQQIHPVVARICEPIDGIDSVLIATWLGL 1240
Query: 1029 DTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEAPTR 1085
D + ++ + + + E + L G A+ E KY+ C++F+ C P+C N +
Sbjct: 1241 DPTQFK--VHDYHKDEENDALLGGPAQLTDEEKYRDCERFKCPC--PTCGTENIYDNVFD 1296
Query: 1086 LSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+ L C N ECK P T++ L NKL D+ ++I KYY+GWL CE+P C + T
Sbjct: 1297 GLGTEMEPSLYRCSNIECKASPLTFIVQLSNKLIMDIRRFIKKYYDGWLICEEPTCRNRT 1356
Query: 1146 RRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK--SD------ 1195
R PL LC C K L Y++ LY QL F+ YI D+ AL K +D
Sbjct: 1357 RHLPLRFSRNGPLCPACSKAILRLEYSDKSLYTQLCFYRYIFDVDCALEKLITDHEKDKV 1416
Query: 1196 -----TPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF-SCEEK 1239
TP+++ D Y K+K VE+FL S Y V+L KLF SC K
Sbjct: 1417 KKQFLTPNVRQD------YGKLKNTVEQFLSQSGYCEVNLSKLFASCAVK 1460
Score = 268 bits (685), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 306/581 (52%), Gaps = 55/581 (9%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K KYE +VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRARREKKSKKGRQEALERLKKAKA-GEKFKYEVEDFASVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIED----VPQKKEKHDKRKKNK-NIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD+ED V +K + R K+K N++ P +I+
Sbjct: 77 DWIVDDDGIGYVEDGREIFDDDLEDDAFDVSEKGKNGRARNKDKRNVKKPKVTKPNNIKS 136
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK 216
+ KK + V L+ DD+L ++L ++NT P + T +V+ K+ +
Sbjct: 137 MFIACAGKKTADKGVDLSKDDLLGNILQDLNTE-TPQI---TPPPVMVLQKKRSTGTSLN 192
Query: 217 EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQ 276
+ + K + K +KEP +K + E+ V E+ KE+ D G E
Sbjct: 193 PFSVHTPKAVPSGKTGSSISRKEPPLTPVPLKCPEFSGEM---VQEEHKEDKQDSGAME- 248
Query: 277 MQIDDWDNSQQTQ--DVLPEQAKV-ELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPP 333
+ D+D + + DV P AK + + E E EE + + S +
Sbjct: 249 FEDGDFDEPMEAEEVDVEPVAAKTWDQKSEPAERVKHEEGLGKGTTSCLGSFL------- 301
Query: 334 PQVVEKKEHKCAEWEAIQTEP---STSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAF 390
P V C W+ Q + S E QV S LPL + ++VF+ ++LDA+
Sbjct: 302 PDV------SC--WDIDQEDDNSFSAQEVQVDS----SYLPLVKGADEEQVFQFYWLDAY 349
Query: 391 EDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPVS 444
ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T PV+
Sbjct: 350 EDQYNQPGVVFLFGKVWIESAKTHVSCCVMVKNIERTLYFLPRETKIDRNTGKETGTPVA 409
Query: 445 IAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLS 503
I VY EFD+ IA +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+ P LP DL
Sbjct: 410 IKDVYDEFDEKIAAKYKIMKFKSKIVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLPQDLK 469
Query: 504 GDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRIT 563
G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E + + + +
Sbjct: 470 GETFSHVFGTNTSSLELFLMSRKIKGPCWLEVKNPQLLNQPISWCKVEAMALKPDLVNVI 529
Query: 564 N-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
V + +T+ + +N + + A ++ L
Sbjct: 530 KDVSPPPLVVMSFSMKTMQDAKDHQNVIIAIAALVHHNFAL 570
>gi|62086807|dbj|BAD92010.1| DNA polymerase alpha catalytic subunit [Caiman crocodilus]
Length = 1419
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/700 (50%), Positives = 469/700 (67%), Gaps = 35/700 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK-----EGEETGE 614
++ITN+ GN++SRT+MGGRSERNE+LLLHAF+E+ Y++PDKQ K + E E+ +
Sbjct: 713 LQITNISGNIMSRTMMGGRSERNEYLLLHAFYERDYIVPDKQVFKKPQQKLVDEDEDFED 772
Query: 615 ANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
K K GRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ R+ D
Sbjct: 773 QTKSKIGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQ-RVSSD 831
Query: 674 SDITTLCEY------LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
T LP+ ++ GILP EI+KLVE RRQVK LMKQP+L+ DL +QYDIR
Sbjct: 832 VQKRTEEGEEEEIPELPDSSLEMGILPKEIRKLVERRRQVKQLMKQPHLNPDLYLQYDIR 891
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 892 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYGDTDS 951
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + + V K+GN+IKSE N+LYK LE+DIDG++K +LLLKKKKYAAL++ +
Sbjct: 952 IMINTNSTNLEEVLKLGNKIKSEVNRLYKLLEIDIDGIFKSLLLLKKKKYAALTVEPTGD 1011
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G + QE+KG+D+VRRDW LA E+G +VI QIL +Q+ D ++NI + I
Sbjct: 1012 GNYVTKQELKGLDIVRRDWCDLAKESGNYVIGQILSDQTR-----DIIVENIQRRLIDIG 1066
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG VP++ EI K LTK P++Y D+K+LPHV VA+ +N+ +K+K GDT+SY+IC
Sbjct: 1067 ENVTNGTVPISQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKSGDTVSYVIC 1126
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ +A+QRAY E+L+ L ID YYLSQQIHPVV R+ EPI+G D+V IA LG
Sbjct: 1127 QDGSNLSASQRAYAPEQLQKQENLTIDTQYYLSQQIHPVVARICEPIDGIDSVLIATWLG 1186
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
LD S ++ + + EEN +G +E KY+ C++F+F C P C N ++
Sbjct: 1187 LDPSQFK--VHHHYHKDEENDAFLGGLAQFTDEEKYRDCERFKFPC--PKCGTENIYDSV 1242
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
S + L +C EC P+ ++ + NKL D+ Y+ KYY GWL CEDP C +
Sbjct: 1243 FDGSGQFLEPSLQQCSKKECNELPFCHVTQMNNKLLFDIRCYLKKYYNGWLICEDPACQN 1302
Query: 1144 LTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKF 1201
TRR PL LC C K L Y++ LY QL F+ YI D+ A+ K T K
Sbjct: 1303 RTRRLPLSFSRNGPLCQACRKAVLRPEYSDKALYNQLCFYRYIFDVEYAMDKVITEEEKV 1362
Query: 1202 DSETYMG-------YCKMKQHVERFLESSAYNIVDLKKLF 1234
+E + Y K+K V+ L S+Y+ V+L KLF
Sbjct: 1363 WAEKNLALKKIKEVYKKLKNTVDTCLSMSSYSEVNLGKLF 1402
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 276/547 (50%), Gaps = 85/547 (15%)
Query: 106 IDDDGGDGYVEDGREIFDDDIED---VPQKKEKHDKRKKNKNIQN-----PNAKGDIQKL 157
I DD G GYVEDGREIFD+D+ED +P KK K DK KN++ PN I+ +
Sbjct: 1 IIDDDGIGYVEDGREIFDEDLEDDALLPIKKGKGDKTNDKKNVKKSVVSKPNT---IKSM 57
Query: 158 LANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKE 217
KK + V L+ DD+L D+L ++N + P +V+ K++ A T+
Sbjct: 58 FIASAGKKNTDKAVDLSKDDLLGDILQDLNAEVTPP--------PVVMMKKKRQAGTS-- 107
Query: 218 YLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQM 277
L FS +V K + ++K +P++ E S + ++N A ++ +G
Sbjct: 108 -LNPFSVQSQVPKVMAPVMQKASTPVRKEAVSLTTSCPKQVNFAAKTVANSKKNG----- 161
Query: 278 QIDDWDNSQQTQD--VLPEQAKVELQI--------EAIESQSIEEKVDVTNVESVSSAVE 327
T D V E+ +E ++ E Q + + D E + + +
Sbjct: 162 ----------TADCTVKAEEKALEGRLLKVKEEKVAEEEHQGMMDFDDGDFDEPMEAG-D 210
Query: 328 LSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDS------------------ 369
+ T P K++ + + EA Q EP HS D S
Sbjct: 211 MDTVPETVRALKRDQEVEKKEAQQGNSVKEEPVGHSSLPDISCWDRMGEEEVDLVASEVQ 270
Query: 370 -----LPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNI 424
PL + +VFR ++LDA+ED Y QPG V+LFGKV+++ ++ SCCV V+NI
Sbjct: 271 VDPNVFPLVNGEDGDQVFRFYWLDAYEDQYNQPGVVFLFGKVWIESAKAYVSCCVTVKNI 330
Query: 425 DRKIYLLPR------SEHLKTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNL 477
+R +YLLPR S +T+ PV+I VY EF DQI+ +YKI+ FKS+K+EK YAF +
Sbjct: 331 ERTVYLLPRKMEVNLSSGQETENPVTIMSVYKEFNDQISVKYKIMKFKSKKVEKHYAFEI 390
Query: 478 PGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPE 537
P VP S+YLEVRYSA+ LP DL G+TFSHVFGT SS LE LL+ RKIKGP WLE
Sbjct: 391 PDVPAKSDYLEVRYSAEFSRLPQDLKGETFSHVFGTNSSSLELLLMSRKIKGPCWLEIKN 450
Query: 538 AEKFPSRISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAF 590
+ +SWCK E + + + + V ++ RT+ ++ +NE + + A
Sbjct: 451 PQPSSQSVSWCKMEAVALKPDLVNVIKDLPPPPLVVISLSIRTIPNPKTHQNEVMAIAAL 510
Query: 591 HEKSYVL 597
+++ L
Sbjct: 511 VHQNFCL 517
>gi|426256798|ref|XP_004022024.1| PREDICTED: DNA polymerase alpha catalytic subunit [Ovis aries]
Length = 1462
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/703 (50%), Positives = 474/703 (67%), Gaps = 39/703 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 766 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQTFRKPQQKLGDEDEDIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAYSGGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 826 DTNKYKKGRKKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++++D + + E LP+ ++ GILP EI+KLVE RRQVK LMKQ +L+ DL +QYDI
Sbjct: 886 AQKVVEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRRQVKQLMKQQDLNPDLHLQYDI 944
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 945 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1004
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S
Sbjct: 1005 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALIVEPTS 1064
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +Q+ D ++NI + + +I
Sbjct: 1065 DGNYVTKQEVKGLDIVRRDWCDLAKDTGNFVIGQILSDQNR-----DTIVENIQKRLIEI 1119
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1120 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1179
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DA+ IA L
Sbjct: 1180 CQDGSNLTAGQRAYAPEQLQKQDNLSIDTQYYLAQQIHPVVARICEPIDGIDAILIASWL 1239
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEA---EEVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A +E KY+ C++F+ C P+C N +
Sbjct: 1240 GLDPTQFRVH---HYHKDEENDALLG-GPAHLTDEEKYKDCERFKCPC--PTCGTENIYD 1293
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ S + L C N CK P T++ L NKL D+ + I KYYEGWL CE+P C
Sbjct: 1294 SVFDGSGTDMEPSLYRCSNINCKASPLTFMVQLSNKLIMDIRRCIKKYYEGWLICEEPTC 1353
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D+ AL K T
Sbjct: 1354 RNRTRHLPLQFSRNGPLCQVCMKATLRLEYSDKSLYTQLCFYRYIFDVECALEKLITDHE 1413
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K + Y K+K E+FL S Y+ V+L +LF+
Sbjct: 1414 KDKLKKQFLTPKVLQDYRKLKNTAEQFLSQSGYSKVNLSRLFA 1456
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 211/585 (36%), Positives = 307/585 (52%), Gaps = 63/585 (10%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K K + A ++LK K G K KYE +VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRSRREKKSKKGRQEALERLKRAKA-GEKCKYEVEDFTSVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDV---PQKKEKHDKR-------KKNKNIQNPNAKGD 153
DWI DD G GYVEDGREIFDDD+ED +K K DK K + PN +
Sbjct: 77 DWIVDDDGIGYVEDGREIFDDDLEDDALDSHEKGKDDKACNKDKRTVKRAAVTKPN---N 133
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT---TIAPTLKLNTKTNEIVIPKEE- 209
I+ + +K + V L+ DD+L D+L ++NT I P ++IPK++
Sbjct: 134 IKSMFIANAGRKTVDKAVDLSKDDLLGDILQDLNTETPQITPP--------PVIIPKKKR 185
Query: 210 PPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPV 269
+ + + K K +KEPS + + E + KEE
Sbjct: 186 SSGASLNPFSVHTPKAAPSGKTTPSASRKEPSLTPASLTCAEFAGEPRPPLCTDDKEE-- 243
Query: 270 DDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVE 327
G E + D+D + + DV P AK Q E ++ ++K D + SSA
Sbjct: 244 -SGAME-FEDGDFDEPMEAEEVDVEPVAAKTLCQ-EREPAEEAKQKADSGKGTASSSASF 300
Query: 328 LSTSPPPQVVEKKEHKCAEWEAIQTEPST-SEPQVHSRTADDSLPLATDHENKKVFRMFF 386
L P V C W+ Q + S+ S P+V ++ LPL + ++VF+ ++
Sbjct: 301 L-----PDV------SC--WDMDQEDDSSFSAPEVQVDSS--HLPLVKGADEEQVFQFYW 345
Query: 387 LDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTK 440
LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R + LPR + ++
Sbjct: 346 LDAYEDPYSQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLCFLPREMKVDLNTGKESG 405
Query: 441 EPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALP 499
PV++ VY EFD+ IA +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+ P LP
Sbjct: 406 TPVTMKDVYDEFDEKIAAKYKIMKFKSKVVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLP 465
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEK 559
DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E + +
Sbjct: 466 QDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKVEAMVLKPDL 525
Query: 560 IRITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + G V+S +T+ ++ NE + + A S+ L
Sbjct: 526 VNVIKDVGPPPVVVMSLSMKTMQNAKTHENEIIAVSALVHHSFAL 570
>gi|198454358|ref|XP_001359561.2| GA19530 [Drosophila pseudoobscura pseudoobscura]
gi|198132759|gb|EAL28710.2| GA19530 [Drosophila pseudoobscura pseudoobscura]
Length = 1474
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/689 (50%), Positives = 467/689 (67%), Gaps = 32/689 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ----YGKNKKEGEETGEA 615
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK+ G +G G+A
Sbjct: 778 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKKPQRGRGAADPDGTFGGDA 837
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 675
RKKAAY+GGLVLEP +G Y+KF++LMDFNSLYPSIIQEYNICFTT+ + D
Sbjct: 838 TALPVRKKAAYAGGLVLEPMRGLYEKFVLLMDFNSLYPSIIQEYNICFTTVQQPVDADEL 897
Query: 676 ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
T LP+ + + GILP ++K+LVESRR+VK LM P+LS +L MQY IRQ ALKLTA
Sbjct: 898 PT-----LPDTKTEAGILPLQLKRLVESRREVKKLMAAPDLSPELQMQYHIRQMALKLTA 952
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
NSMYGCLGF +SRFFAQ LAALVT KGREIL NT+ LV+ LNY+V+YGDTDSLMI+ N+
Sbjct: 953 NSMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQKLNYDVVYGDTDSLMINTNIT 1012
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQE 855
DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK S G + QE
Sbjct: 1013 DYDQVYKIGHSIKQSVNKLYKQLELDIDGVFSCLLLLKKKKYAAVKVSKTSKGGLKREQE 1072
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFV 915
KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H +++I+ + V
Sbjct: 1073 HKGLDIVRRDWSQLAVMVGKAVLDEVLAEK-----QLEEKLDAVHAQLERIKDQIAQSAV 1127
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA 975
PL L ITKQLT+AP+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT+ AA
Sbjct: 1128 PLPLFVITKQLTRAPQEYANSGSLPHVQVALRMNRERNRRYKKGDMVDYVICVDGTTNAA 1187
Query: 976 TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRS 1035
QRAY+++ELK + LK+D +YYL QIHPVVTR++E +EGTDA RIAECLG+D + +R
Sbjct: 1188 MQRAYHLDELKGSETLKLDTDYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPTKFR- 1246
Query: 1036 QIKESIQQSEENILGVGEAEEV------KYQFCDKFEFTCMNPSCKQVNTVEAPTRLST- 1088
++ Q+++ I E E + Y+ C+ F F C+ +CK + + R
Sbjct: 1247 ---QNAQRAQREINEQAEGESLLKTTLQLYRLCEPFRFNCV--TCKTEQLMASAYRPGVN 1301
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRC 1148
H V VL +C EC+ P YL + N+L + +Y+ ++Y+ WL C+ P C+ TR
Sbjct: 1302 HSHVPVLQQCSKAECQTAPLQYLVSIRNQLQLAIRRYVQRFYKNWLVCDHPDCNYNTRTH 1361
Query: 1149 PL--GLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETY 1206
L ++ LC C L R YTE LY QL + ++ D+ K + P++ E
Sbjct: 1362 TLKKDMRRPLCYKCKSGSLLRQYTERDLYNQLCYLRFLFDLNKQQLQQ-KPTMT--PELE 1418
Query: 1207 MGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
GY + + V++ L+SS+Y ++ L+KLF
Sbjct: 1419 QGYQMLYETVDQHLQSSSYVVISLRKLFG 1447
Score = 220 bits (561), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 294/599 (49%), Gaps = 67/599 (11%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
G R KRQ+IDK +FAA +KL+ LKG K + E D NVYE V E+EY +R ++ D
Sbjct: 7 GPRVKRQRIDKNGRFAALEKLRQLKGTKNKCQVEEDVD-NVYEVVDEREYAKRAQEKYGD 65
Query: 104 DWIDDDGGDGYVEDGREIFDDDIE----------DVPQKKEKHDKRKKNKNIQNP-NAKG 152
DWI++DG GY EDGR+ F+D+ E +KK + +K+ + + P K
Sbjct: 66 DWIEEDGT-GYAEDGRDFFEDEDEYSDEGEDKKDTKNKKKNLANNKKRPRESEKPVKGKA 124
Query: 153 DIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKT---NEIVIPKEE 209
I+ L +N V KK + + +DD+LAD+L E+ + K K +IV+ +
Sbjct: 125 SIKNLFSNA-VPKKTDVKNSVKDDDILADILGEMKEEPGVSPKKEEKVIAPAKIVLATRK 183
Query: 210 PPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSP--------LKDEIKSNDSVM-EVEMNV 260
A AK+Y+ +F IK++++ K K E S LK + N V E +
Sbjct: 184 SEAAAAKDYMNSFLNNIKIQEQERK--KAEASSDHEMLERILKPKAAPNKKVASETPQSS 241
Query: 261 AEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVE 320
A Q K+EP + + T+D P+ ++ E+Q EK
Sbjct: 242 AVQVKKEPPS----AKKNTTATQPEEATEDPFPDNDMDFSCLDDDENQFEVEKPKEAIPT 297
Query: 321 SVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKK 380
V + E ++S PP+ E + WE+I E + + S+ ++D +
Sbjct: 298 PVQTKPETASSSPPEEPEDISKLLSNWESICQMDDDFEKSALAGEQETSI--SSDEQ--- 352
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK-- 438
R ++ +A+ED K PG V+LFG+ S CV VQNI+R +YLLPR L
Sbjct: 353 -LRFWYWEAWEDPQKLPGEVFLFGRT-----ADGKSVCVRVQNINRVLYLLPRQHLLDPI 406
Query: 439 TKEP----VSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPG--VPDLSEYLEVRY 491
TKEP V++ +Y EFD +A K+ F+SRK+ K +A + G VP +YLEV Y
Sbjct: 407 TKEPTKQKVTVVDIYKEFDSHVANNLKLDTFRSRKVSKNFANHAIGIDVPQTCDYLEVHY 466
Query: 492 SAKCPALP--SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
K PA P ++ D+ +H+FG ++ LE LLERKIKGP WL+ + P+ +SWCK
Sbjct: 467 DGKKPA-PNVANQKYDSIAHIFGAGTNALERFLLERKIKGPGWLQISGFKVPPAPMSWCK 525
Query: 550 YEVQCNQMEKIRITNVCGNVLS-----------RTLMGGRSERNEFLLLHAF-HEKSYV 596
EV ++ + + + G + RT M ++ +NE ++ H + ++
Sbjct: 526 MEVTVSEPKNVELVQDKGKPAAPPPLTLLALNVRTSMNPKTMKNEICMISMLTHNRFHI 584
>gi|291407253|ref|XP_002720044.1| PREDICTED: DNA-directed DNA polymerase alpha 1 [Oryctolagus
cuniculus]
Length = 1469
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/699 (50%), Positives = 467/699 (66%), Gaps = 32/699 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK-----EGEETGE 614
++ITN+ GNV+SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + + E E G+
Sbjct: 774 LQITNIAGNVMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEMDGD 833
Query: 615 ANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
+K KGR+KAAY+GGLVL+PK GFYDKF++L+DFNSLYPSIIQE+NICFTT+ + +
Sbjct: 834 TDKYKKGRRKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQRVVSEA 893
Query: 674 SDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
+T E LP+ ++ GILP EI+KLVE R+ VK LMKQ +L+ DL++QYDIRQ
Sbjct: 894 QKVTEDGEQEQIPELPDPGLEMGILPREIRKLVERRKHVKQLMKQQDLNPDLVLQYDIRQ 953
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
KALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS+
Sbjct: 954 KALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSI 1013
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
MI+ N + + VFK+GN+IK+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + S+G
Sbjct: 1014 MINTNSTNLEEVFKLGNKIKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDG 1073
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
I QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1074 NYITKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEIGE 1128
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE 968
++ NG VP+ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+IC+
Sbjct: 1129 NVLNGSVPVNQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQ 1188
Query: 969 DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA LGL
Sbjct: 1189 DGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGL 1248
Query: 1029 DTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEAPTR 1085
D + +R + + E + L G A+ E KY+ C+KF+ C P+C N +
Sbjct: 1249 DPTQFR--VSHYHKDEENDALLGGPAQLTDEEKYKDCEKFKCPC--PTCGTENIYDNVFD 1304
Query: 1086 LSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+ L C N CK P T++ L NKL D+ + I KYY+GWL CE+P C + T
Sbjct: 1305 GLGADMEPSLYRCSNINCKASPLTFVVQLCNKLVMDIRRCIKKYYDGWLVCEEPMCRNRT 1364
Query: 1146 RRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK--- 1200
R PL LC C K L Y++ LY QL F+ YI D+ AL K T K
Sbjct: 1365 RHLPLQFSRNGPLCPACTKATLRAEYSDKTLYTQLCFYRYIFDVDCALEKLITDHEKEKM 1424
Query: 1201 ----FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1425 KKQYLTQKVLQDYRKLKNTAEQFLLRSGYSEVNLSKLFA 1463
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 307/588 (52%), Gaps = 67/588 (11%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 24 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDD 82
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDK-----RKKNKNIQNPNAK--GDIQK 156
DWI DD G GYVEDGREIFDDD+ED + K K +N++ P+ +I+
Sbjct: 83 DWIVDDDGIGYVEDGREIFDDDLEDDTLDASEKGKDVKTHSKGKRNVKKPSVTKPNNIKT 142
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPA--PT 214
+L KK + V L+ DD+L D+L + LNT+T +I PP P
Sbjct: 143 MLIAGAGKKTADKAVDLSKDDLLGDILQD----------LNTETPQIT----PPPVIIPK 188
Query: 215 AKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEI--------KSNDSVMEVEMNVAEQSKE 266
K L P V P K SP+ ++ K + V +V + ++
Sbjct: 189 KKRSLGASLNPFSVRPSKAVPSGKSASPVVGKVPPLTPAPHKRAEFVGDVVQGEPREDEQ 248
Query: 267 EPVDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSS 324
EP G E + D+D +++ D+ P AK Q ES+ E DV + S+
Sbjct: 249 EP---GAME-FEDGDFDEPMESEEVDIEPVAAKTWAQ----ESEPAEAVQDVADPGREST 300
Query: 325 AVELSTSPPPQVVEKKEHKCAEWEAIQTEPST-SEPQVHSRTADDSLPLATDHENKKVFR 383
+ S P + C W+ Q + S+ S +V LPL + ++VF+
Sbjct: 301 SYLGSFLP--------DVSC--WDIDQEDDSSLSAQEVEVHVDSSHLPLVKGADEEQVFQ 350
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------ 437
++LDA+ED Y QPG V+LFGKV+++ +H SCCV V+NI+R +Y LPR +
Sbjct: 351 FYWLDAYEDQYNQPGVVFLFGKVWIESAKTHVSCCVTVKNIERTLYFLPREMKMDLNTEK 410
Query: 438 KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP 496
+T V++ VY EFD+ IAT+Y+I+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+ P
Sbjct: 411 ETGTSVTMKDVYDEFDEKIATKYRIMKFKSKIVEKNYAFEVPDVPEKSEYLEVRYSAELP 470
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQ 556
LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E +
Sbjct: 471 QLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQSVSWCKVEAMALK 530
Query: 557 MEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + V + +T+ +S +NE + + A S+ L
Sbjct: 531 PDLVNVVKDVSPPPLVVMSFSMKTMQNAKSHQNEIIAVAALVHHSFAL 578
>gi|6015013|sp|O89042.1|DPOLA_RAT RecName: Full=DNA polymerase alpha catalytic subunit; AltName:
Full=DNA polymerase alpha catalytic subunit p180
gi|3676242|emb|CAA09720.1| DNA polymerase alpha subunit I [Rattus norvegicus]
Length = 1451
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/689 (51%), Positives = 469/689 (68%), Gaps = 34/689 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 773 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKPGDEDEEIDG 832
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 833 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 892
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ +D GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 893 TLKATEDEEQEQIPE-LPDPNLDMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 951
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 952 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1011
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1012 SIMINTNSTNLEEVFKLGNKVKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1071
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G I QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1072 DGNYITKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1126
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1127 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1186
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ ATQRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1187 CQDGSNLPATQRAYAPEQLQKQDNLAIDTQYYLAQQIHPVVARICEPIDGIDAVLIALWL 1246
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
GLD++ +R + + + E + L G A+ E KY+ C+KF+ C+ PSC N +
Sbjct: 1247 GLDSTQFR--VHQYHKDEENDALLGGPAQLTDEEKYKDCEKFK--CLCPSCGTENIYDNV 1302
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
S + L+ C N +CK P T++ L NKL D+ + I KYY+GWL CE+P C +
Sbjct: 1303 FEGSGMDMEPSLNRCSNIDCKASPATFMVQLSNKLIMDIRRCIKKYYDGWLICEEPTCRN 1362
Query: 1144 LTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK---SDTPS 1198
RR PL LC C K L Y++ LY QL F+ YI D AL K +
Sbjct: 1363 RIRRLPLHFSRNGPLCPACMKAVLRPEYSDKSLYTQLCFYRYIFDADCALEKLPEHEKDK 1422
Query: 1199 IK---FDSETYMGYCKMKQHVERFLESSA 1224
+K F Y K+K E FL S
Sbjct: 1423 LKKQFFTPRVLQDYRKVKNIAEHFLSWSG 1451
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 203/553 (36%), Positives = 303/553 (54%), Gaps = 66/553 (11%)
Query: 26 TRARSACSSFCVGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVY 85
T A S SF RA+R+K K + A ++LK K G K+KYE +VY
Sbjct: 13 TSAVSDSGSFV-------ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSVY 64
Query: 86 EEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIED-----VPQKKEKHDKRK 140
EEV E++Y++ V RQ+DDWI DD G GYVEDGREIFDDD+ED + + RK
Sbjct: 65 EEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDTCGEGSDGKAHRK 124
Query: 141 KNKNIQNPNAK--GDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT---TIAPTLK 195
K+++ P+ +I+ + KK + V L+ DD+L D+L ++NT IAP
Sbjct: 125 DRKDVKKPSVTKPNNIKAMFIASAGKKTTDKTVDLSKDDLLGDILQDLNTETPQIAPP-- 182
Query: 196 LNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSN 250
++IPK++ + + + KI P+ ++ P PLK
Sbjct: 183 ------PVLIPKKKRSTGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKR----- 231
Query: 251 DSVMEVEMNVAE-QSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQS 309
E ++A+ + E+ + G+ E + D+D T++V E+ V +I ES+
Sbjct: 232 ---AEFAGDLAQPECPEDEQESGVIE-FEDGDFDEPMDTEEV-DEEEPVTAKIWDQESEP 286
Query: 310 IEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPST---SEPQVHSRTA 366
+E + E+ +++ S P + C W+ Q + ++ E QV S
Sbjct: 287 VEGVKHEADPETGTTSFLDSFLP--------DVSC--WDIDQKDENSFLLQEVQVDS--- 333
Query: 367 DDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDR 426
+ LPL ++++VF+ ++LDA+ED Y QPG V+LFGKV+V+ +H SCCV+V+NI+R
Sbjct: 334 -NHLPLVKGADDEQVFQFYWLDAYEDPYNQPGVVFLFGKVWVESAKTHVSCCVMVKNIER 392
Query: 427 KIYLLPRSEHL------KTKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPG 479
+Y LPR + +T P+++ VY EFD +I+ +YKI+ FKS+ +EK YAF +P
Sbjct: 393 TLYFLPREMKIDLNTGKETATPITMKDVYEEFDSKISAKYKIMKFKSKIVEKNYAFEIPD 452
Query: 480 VPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
VP+ SEYLEVRYSA+ P LP +L G+TFSHVFGT +S LE L+ RKIKGP WLE +
Sbjct: 453 VPEKSEYLEVRYSAEVPQLPQNLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQ 512
Query: 540 KFPSRISWCKYEV 552
ISWCK+E
Sbjct: 513 LLNQPISWCKFEA 525
>gi|195344386|ref|XP_002038769.1| GM10998 [Drosophila sechellia]
gi|194133790|gb|EDW55306.1| GM10998 [Drosophila sechellia]
Length = 1488
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/708 (49%), Positives = 473/708 (66%), Gaps = 33/708 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGE 614
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK + G + +G
Sbjct: 788 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKKPVSKRSGAGDTDATLSGA 847
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ +KKAAY+GGLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT+ + D
Sbjct: 848 DATMQTKKKAAYAGGLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPVDADE 907
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
T LP+ + + GILP ++K+LVESR++VK LM +LS +L MQY IRQ ALKLT
Sbjct: 908 LPT-----LPDSKTEPGILPLQLKRLVESRKEVKKLMAAHDLSPELQMQYHIRQMALKLT 962
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF +SRFFAQ LAALVT KGREIL NT+ LV+ LNY+V+YGDTDSLMI+ N+
Sbjct: 963 ANSMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQKLNYDVVYGDTDSLMINTNI 1022
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK S G + Q
Sbjct: 1023 TDYDQVYKIGHNIKQSVNKLYKQLELDIDGVFGCLLLLKKKKYAAVKLSKDSKGNLRREQ 1082
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+T + G
Sbjct: 1083 EHKGLDIVRRDWSQLAVMVGKAVLDEVLSEK-----PLEEKLDAVHAQLEKIKTQIAEGV 1137
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
VPL L ITKQLT+ P+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT+ A
Sbjct: 1138 VPLPLFVITKQLTRTPQEYANSASLPHVQVALRMNRERNRRYKKGDMVDYVICLDGTTNA 1197
Query: 975 ATQRAYNIEELKN--NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
A QRAY+++ELK + KL++D NYYL QIHPVVTR++E +EGTDA RIAECLG+D +
Sbjct: 1198 AMQRAYHLDELKTSEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPTK 1257
Query: 1033 YRSQI----KESIQQSE-ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
+R +E+ +QSE E++L Y+ C+ F F C+ +CK + + R
Sbjct: 1258 FRQNAQRTQRENTEQSEGESLLKTTLQ---LYRLCEPFRFRCV--TCKTEQLMASAYRPG 1312
Query: 1088 -THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
++ + VL +C EC+ P YL + N+L M +Y+ ++Y+ WL C+ P C+ TR
Sbjct: 1313 PSNSHIAVLQQCAKSECQTAPIQYLASVRNQLQLSMRQYVQRFYKNWLVCDHPDCNFNTR 1372
Query: 1147 RCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE 1204
L K+ LC C L R YTE LY QL + ++ D+ K T P++ E
Sbjct: 1373 THSLRKKSHRPLCQKCRSGSLLRQYTERDLYNQLCYLRFMFDLGKQ-TLQQKPTLT--PE 1429
Query: 1205 TYMGYCKMKQHVERFLESSAYNIVDLKKLFSCEEKQPKLSRGVEREHV 1252
Y + + V++ L+SS+Y I+ L KLF+ Q L V + +
Sbjct: 1430 LEQAYQLLYETVDQQLQSSSYVIISLSKLFARSLAQMSLQPSVAQPQI 1477
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 292/617 (47%), Gaps = 116/617 (18%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RAKRQ++DK +FAA ++L+ LKG K K E ++VY+ V E+EY +R ++ DDW
Sbjct: 9 RAKRQRVDKNGRFAAMERLRQLKGTKNKCKVE-DQVDDVYDVVDEREYAKRAQEKYGDDW 67
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKN----------KNIQNP-NAKGDI 154
I++DG GY ED R+ F+D+ E ++++ D +KK + + P K I
Sbjct: 68 IEEDGT-GYAEDLRDFFEDEDEYSDGEEDRKDSKKKKGVAPNSKKRPRETEKPVTGKASI 126
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKT---NEIVIPKEEPP 211
+ L +N V KK + + +DD+LAD+L E+ A T + K +I + +
Sbjct: 127 KNLFSNA-VPKKVDVKTSVKDDDILADILGEIKEEPAGTSEKAEKVIAPAKISVTSRKFD 185
Query: 212 APTAKEYLANFSKPIKVEK----------------KIEKP----------------IKKE 239
A AKEY+ +F IKV++ +I KP IKKE
Sbjct: 186 AAAAKEYMNSFLNNIKVQEQERKKAEASSDNEMLERILKPKAAVPNTKVAFFSSPTIKKE 245
Query: 240 PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDN------SQQTQDVLP 293
P+P E A+++ E+P D + +DD +N +QQT+ V
Sbjct: 246 PTP--------------EKIPAKKATEDPFSDNEMDFSCLDDDENQFDVEKTQQTEKV-- 289
Query: 294 EQAKVELQIEAIESQSIEEKVDVTNV-ESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQT 352
++++ EK + V E + E + SP E WE+I
Sbjct: 290 -----------SQTKTTAEKTSQSKVAEKAAPLKETTGSPKESESEDISRLLNNWESICQ 338
Query: 353 EPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENN 412
E V T D +++D + R ++ +A+ED K PG V+LFG+
Sbjct: 339 MDDDFEKSV--LTTDQDSTISSDQQ----LRFWYWEAYEDPVKMPGEVFLFGRT-----A 387
Query: 413 SHSSCCVIVQNIDRKIYLLPRSEHLK------TKEPVSIAQVYSEFD-QIATQYKILDFK 465
S C+ VQNI+R +YLLPR L TK+ V++A +Y EFD ++A Q K+ F+
Sbjct: 388 DGKSVCLRVQNINRVLYLLPRQFLLDPISKEITKQKVTVADIYKEFDNEVANQLKLEFFR 447
Query: 466 SRKIEKKYAFNLPG--VPDLSEYLEVRYSAK--CPALPSDLSGDTFSHVFGTKSSFLENL 521
SRK+ K +A + G VP +YLEV Y K P L +D ++ +H+FG ++ LE
Sbjct: 448 SRKVTKSFAHHAIGIEVPQSCDYLEVHYDGKKPLPNLSADKKYNSIAHIFGATTNALERF 507
Query: 522 LLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLS---------- 571
LL+RKIKGP WL+ + P+ +SWC EV + + + + G
Sbjct: 508 LLDRKIKGPCWLQVTGFKVSPTPMSWCNTEVTLTEPKNVELVQDKGKPAPPPPLTLLALN 567
Query: 572 -RTLMGGRSERNEFLLL 587
RT M ++ RNE ++
Sbjct: 568 VRTSMNPKTSRNEICMI 584
>gi|195153122|ref|XP_002017478.1| GL21505 [Drosophila persimilis]
gi|194112535|gb|EDW34578.1| GL21505 [Drosophila persimilis]
Length = 1474
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/689 (49%), Positives = 467/689 (67%), Gaps = 32/689 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ----YGKNKKEGEETGEA 615
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK+ G +G G+A
Sbjct: 778 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKKPQRGRGAADPDGTFGGDA 837
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 675
RKKAAY+GGLVLEP +G Y+KF++LMDFNSLYPSIIQEYNICFTT+ + D
Sbjct: 838 TALPVRKKAAYAGGLVLEPMRGLYEKFVLLMDFNSLYPSIIQEYNICFTTVQQPVDADEL 897
Query: 676 ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
T LP+ + + GILP ++K+LVESRR+VK LM P+LS +L MQY IRQ ALKLTA
Sbjct: 898 PT-----LPDTKTEAGILPLQLKRLVESRREVKKLMAAPDLSPELQMQYHIRQMALKLTA 952
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
NSMYGCLGF +SRFFAQ LAALVT KGREIL NT+ LV+ LNY+V+YGDTDSLMI+ N+
Sbjct: 953 NSMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQKLNYDVVYGDTDSLMINTNIT 1012
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQE 855
DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK + G + QE
Sbjct: 1013 DYDQVYKIGHSIKQSVNKLYKQLELDIDGVFSCLLLLKKKKYAAVKVSKTAKGVLKREQE 1072
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFV 915
KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H +++I+ + V
Sbjct: 1073 HKGLDIVRRDWSQLAVMVGKAVLDEVLAEK-----QLEEKLDAVHAQLERIKDQIAQSAV 1127
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA 975
PL L ITKQLT+AP+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT+ AA
Sbjct: 1128 PLPLFVITKQLTRAPQEYANSGSLPHVQVALRMNRERNRRYKKGDMVDYVICVDGTTNAA 1187
Query: 976 TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRS 1035
QRAY+++ELK + LK+D +YYL QIHPVVTR++E +EGTDA RIAECLG+D + +R
Sbjct: 1188 MQRAYHLDELKGSETLKLDTDYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPTKFR- 1246
Query: 1036 QIKESIQQSEENILGVGEAEEV------KYQFCDKFEFTCMNPSCKQVNTVEAPTRLST- 1088
++ Q+++ I E E + Y+ C+ F F C+ +CK + + R
Sbjct: 1247 ---QNAQRAQREINEQAEGESLLKTTLQLYRLCEPFRFNCV--TCKTEQLMASAYRPGVN 1301
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRC 1148
H V VL +C EC+ P YL + N+L + +Y+ ++Y+ WL C+ P C+ TR
Sbjct: 1302 HSHVPVLQQCSKAECQTAPLQYLVSIRNQLQLAIRRYVQRFYKNWLVCDHPDCNYNTRTH 1361
Query: 1149 PL--GLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETY 1206
L ++ LC C L R YTE LY QL + ++ D+ K + P++ E
Sbjct: 1362 TLKKDMRRPLCYKCKSGSLLRQYTERDLYNQLCYLRFLFDLNKQQLQQ-KPTMT--PELE 1418
Query: 1207 MGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
GY + + V++ L+SS+Y ++ L+KLF
Sbjct: 1419 QGYQMLYETVDQHLQSSSYVVISLRKLFG 1447
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 296/599 (49%), Gaps = 67/599 (11%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
G R KRQ+IDK +FAA +KL+ LKG K + E D NVYE V E+EY +R ++ D
Sbjct: 7 GPRVKRQRIDKNGRFAALEKLRQLKGTKNKCQVEEDVD-NVYEVVDEREYAKRAQEKYGD 65
Query: 104 DWIDDDGGDGYVEDGREIFDDDIE----------DVPQKKEKHDKRKKNKNIQNP-NAKG 152
DWI++DG GY EDGR+ F+D+ E +KK + +K+ + + P K
Sbjct: 66 DWIEEDGT-GYAEDGRDFFEDEDEYSDEGEDKKDTKNKKKNLANNKKRPRESEKPVKGKA 124
Query: 153 DIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKT---NEIVIPKEE 209
I+ L +N V KK + + +DD+LAD+L E+ + K K +IV+ +
Sbjct: 125 SIKNLFSNA-VPKKTDVKNSVKDDDILADILGEMKEEPGVSPKKEEKVIAPAKIVLATRK 183
Query: 210 PPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSP--------LKDEIKSNDSVM-EVEMNV 260
A AK+Y+ +F IK++++ K K E S LK + N V E+ +
Sbjct: 184 SEAAAAKDYMNSFLNNIKIQEQERK--KAEASSDHEMLERILKPKAAPNKKVASEMPQSS 241
Query: 261 AEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVE 320
A Q K+EP + + T+D P+ ++ E+Q EK
Sbjct: 242 AVQVKKEPPS----AKKNTTATQPDEATEDPFPDNDMDFSCLDDDENQFEVEKPKEAIPT 297
Query: 321 SVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKK 380
V + E ++S PP+ E + WE+I E + + S+ ++D +
Sbjct: 298 PVPTKPETASSSPPEEPEDISKLLSNWESICQMDDDFEKSALAGEQETSI--SSDEQ--- 352
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK-- 438
R ++ +A+ED K PG V+LFG+ S CV VQNI+R +YLLPR L
Sbjct: 353 -LRFWYWEAWEDPQKLPGEVFLFGRT-----ADGKSVCVRVQNINRVLYLLPRQHLLDPI 406
Query: 439 TKEP----VSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPG--VPDLSEYLEVRY 491
TKEP V++A +Y EFD +A K+ F+SRK+ K +A + G VP +YLEV Y
Sbjct: 407 TKEPTKQKVTVADIYKEFDSHVANNLKLDTFRSRKVSKNFANHAIGIDVPQTCDYLEVHY 466
Query: 492 SAKCPALP--SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
K PA P ++ D+ +H+FG ++ LE LLERKIKGP WL+ + P+ +SWCK
Sbjct: 467 DGKKPA-PNVANQKYDSIAHIFGAGTNALERFLLERKIKGPGWLQISGFKIPPAPMSWCK 525
Query: 550 YEVQCNQMEKIRITNVCGNVLS-----------RTLMGGRSERNEFLLLHAF-HEKSYV 596
EV ++ + + + G + RT M ++ +NE ++ H + ++
Sbjct: 526 MEVTVSEPKNVELVQDKGKPAAPPPLTLLALNVRTSMNPKTMKNEICMISMLTHNRFHI 584
>gi|345482887|ref|XP_001603716.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Nasonia
vitripennis]
Length = 1528
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/679 (49%), Positives = 465/679 (68%), Gaps = 25/679 (3%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++ITN+ GN LSRTL GR+ERNEFLLLHAF++K Y+ PDK+ KKEG EA G
Sbjct: 833 LQITNIAGNTLSRTLSAGRAERNEFLLLHAFYQKGYITPDKRTQTKKKEG---AEATHG- 888
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
G+KK AY+GGLVLEPKKGFYDK I+LMDFNSLYPSIIQE+N+CFTT+P + D L
Sbjct: 889 GKKKPAYAGGLVLEPKKGFYDKLILLMDFNSLYPSIIQEFNLCFTTVPGAAFANVDDLEL 948
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
PE V+ G++P+EI+KLV+SR +VK LMK PNLS +L +QY+IRQ ALKLTANSMY
Sbjct: 949 ----PEPTVEDGVVPTEIRKLVQSRVEVKKLMKAPNLSPELKVQYNIRQLALKLTANSMY 1004
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG + RF+A+ LAALVT KGREIL N+K+LVE NYEVIYGDTDS+MI+ N+ +YD
Sbjct: 1005 GCLGATHCRFYAKGLAALVTMKGREILQNSKALVEKANYEVIYGDTDSIMINTNILEYDQ 1064
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
VF IG +IK + NK YK++ELDIDGV++Y+LLL+KKKYAA+++SK +G+M ++E+KG+
Sbjct: 1065 VFSIGKEIKKDVNKTYKKVELDIDGVFRYLLLLQKKKYAAVTMSKSPSGQMQYTKELKGL 1124
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDW LA + G ++ Q+L +QS + R+ I + ++++ +L G +PL+L
Sbjct: 1125 DIVRRDWCGLACDIGNQILDQLLSDQSS-----ESRVGKIFDILQQVGNNLREGNLPLSL 1179
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
L ITKQL+K P EY + K L HV VALRLN + +K K GDT+ YIICEDGT + +RA
Sbjct: 1180 LVITKQLSKNPHEYPNDKKLSHVLVALRLNESGGRKWKAGDTVPYIICEDGTDKTPLERA 1239
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+IEE K N LKIDVNYYL QQIHPVV R+ EPIEG D V +A+ +G+ LY+ +
Sbjct: 1240 YHIEEFKKNDNLKIDVNYYLLQQIHPVVLRICEPIEGIDDVLLAQHIGV-GDLYKPKKVH 1298
Query: 1040 SIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV--FVLDE 1097
+ Q+ E L + ++ +Y C +F C N +CK +E T ++ V L
Sbjct: 1299 TAQEEGEVPLCI---QDNRYDNCHPLKFKCKNENCK--FEIEIKTTITEFAGVPRPTLAL 1353
Query: 1098 CINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL- 1156
C NP C +PP+ Y + N+L Q++ K+I +YY G ++CE+P C + RR +G
Sbjct: 1354 CPNPACDMPPWRYADAIQNRLQQEIRKFISQYYYGEVECENPICLKVMRRITMGTLGTFP 1413
Query: 1157 -CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQH 1215
C C +HR+Y E +LY QLS++ ++ + + K+ P+ E Y +K+
Sbjct: 1414 KCYNCLDGNVHRIYKETELYNQLSYYLHLFTLNQTHFKNLKPAPT--RELIAVYDTLKEF 1471
Query: 1216 VERFLESSAYNIVDLKKLF 1234
VE+ ++++AY++VDL KLF
Sbjct: 1472 VEKQIQANAYSVVDLTKLF 1490
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Query: 354 PSTSEPQVHSRTADDSLPL--ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKEN 411
PS+ P + LPL T+ +KVFR F+LDAFED YKQPG VYLFGKVFV E
Sbjct: 374 PSSVAPPSKTPIPATQLPLPTTTNAAGEKVFRFFWLDAFEDPYKQPGVVYLFGKVFVNEL 433
Query: 412 NSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQV---YSEFDQIATQYKILDFKSRK 468
N + SCC+ V+NI R+IY L R + E +Q + E + + KI +FK R+
Sbjct: 434 NEYVSCCLGVKNISRRIYCLLRDNPNGSDENEEKSQGQRGWEELKEYTAKLKIKEFKCRE 493
Query: 469 IEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIK 528
+ KYAF P ++YLEVRY+A P +D SG VFGT + LE LL+ER +K
Sbjct: 494 LSMKYAFEREDTPTQAQYLEVRYAATDPPFEADYSGPNIEAVFGTTVNALELLLIERNLK 553
Query: 529 GPSWLEFPEAEKFPSRISWCKYEVQCNQM 557
GP WL+ + SWCK + C ++
Sbjct: 554 GPCWLDLKAPLPVDNAFSWCKVQANCTRI 582
>gi|344288735|ref|XP_003416102.1| PREDICTED: DNA polymerase alpha catalytic subunit [Loxodonta
africana]
Length = 1461
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/705 (50%), Positives = 468/705 (66%), Gaps = 35/705 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GNV+SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 766 LQITNIAGNVMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 825
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ +K KGRKKAAYSGGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 826 DTSKYKKGRKKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 885
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
IT E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDIR
Sbjct: 886 AQKITEDGEQEQIPELPDPSLEIGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDIR 945
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 946 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 1005
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S+
Sbjct: 1006 IMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSD 1065
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G QE+KG+D VRRDW LA + G FVI QIL +Q+ D ++NI + + +I
Sbjct: 1066 GNYFIKQELKGLDTVRRDWCDLAKDTGNFVIGQILSDQNR-----DTIVENIQKRLIEIG 1120
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ +G +P++ EI K LTK P++Y D+K LPHV VAL +N+ +K+K GDT+SYIIC
Sbjct: 1121 ENVLSGRIPVSQFEINKALTKDPQDYPDKKNLPHVHVALWINSQGGRKMKPGDTVSYIIC 1180
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ A QRAY E+L+ L ID YYL+QQ+HPVV R+ EPI+G DAV IA LG
Sbjct: 1181 QDGSNLTANQRAYAPEQLQKQDGLTIDTQYYLAQQVHPVVARICEPIDGIDAVLIATWLG 1240
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
LD + +R Q + EEN +G +E KY+ C++F+ C P+C N +
Sbjct: 1241 LDPTQFRVQ---HYHKDEENAALLGGPAQLTDEEKYRDCERFKCPC--PTCGTENIYDGV 1295
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
S + L C N +CK P T+ L NKL D+ + I KYY+GWL CE+ C +
Sbjct: 1296 FDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRCIKKYYDGWLICEEQTCQN 1355
Query: 1144 LTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK- 1200
TR PL LC C K L Y++ LY QL F+ YI D+ AL K T K
Sbjct: 1356 RTRHLPLQFSRNGPLCQACMKATLRPEYSDKSLYTQLCFYRYIFDVDCALEKLITDHEKE 1415
Query: 1201 -----FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF-SCEEK 1239
+ Y K+K ++FL S Y+ V+L KLF SC K
Sbjct: 1416 KLKKFLTPKVLQDYGKLKNTAQQFLSRSGYSEVNLSKLFASCAMK 1460
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/265 (40%), Positives = 158/265 (59%), Gaps = 15/265 (5%)
Query: 347 WEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKV 406
W Q + S PQ + LP+ + ++ F+ ++LDA+ED Y QPG V+LFGKV
Sbjct: 307 WGIDQGDESRFSPQ-EVQVDSSYLPMVKGADEEQAFQFYWLDAYEDPYNQPGVVFLFGKV 365
Query: 407 FVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPVSIAQVYSEFDQ-IATQY 459
+++ ++ SCCV+V+NI+R +Y LPR + +T PV++ VY EFD+ IAT+Y
Sbjct: 366 WIESAKTYVSCCVMVKNIERTLYFLPRELKIDLNTGKETGTPVTMKDVYDEFDEKIATKY 425
Query: 460 KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLE 519
K++ FKS+ +EK YAF +P VP+ SEYLEVRYSA+ P LP DL G+TFSHVFGT +S LE
Sbjct: 426 KLMKFKSKIVEKNYAFEIPDVPEKSEYLEVRYSAESPQLPQDLKGETFSHVFGTNTSSLE 485
Query: 520 NLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITN-------VCGNVLSR 572
L+ RKIKGP WLE + +SWCK E + E + + V + +
Sbjct: 486 LFLMNRKIKGPCWLEVKNPQLLNQPVSWCKVETMALKPELVNVIKDVAPPPLVVMSFSMK 545
Query: 573 TLMGGRSERNEFLLLHAFHEKSYVL 597
T+ ++ +NE + + S+ L
Sbjct: 546 TMQHAKTHQNEIIAMAVLVHHSFAL 570
>gi|17944210|gb|AAL48000.1| GM13460p [Drosophila melanogaster]
Length = 746
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/711 (49%), Positives = 480/711 (67%), Gaps = 39/711 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGE 614
++ITN+CGN ++RTL GGRSERNEFLLLHAF+EK+Y++PDK + G + +G
Sbjct: 46 LQITNICGNTMTRTLQGGRSERNEFLLLHAFYEKNYIVPDKKPVSKRSGAGDTDATLSGA 105
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQ 672
+ +KKAAY+GGLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT+ PV
Sbjct: 106 DATMQTKKKAAYAGGLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPV---- 161
Query: 673 DSD-ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
D+D + TL P+ + + GILP ++K+LVESR++VK LM P+LS +L MQY IRQ AL
Sbjct: 162 DADELPTL----PDSKTEPGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMAL 217
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLGF +SRFFAQ LAALVT KGREIL NT+ LV+ +NY+V+YGDTDSLMI+
Sbjct: 218 KLTANSMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQKMNYDVVYGDTDSLMIN 277
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
N+ DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK S G +
Sbjct: 278 TNITDYDQVYKIGHNIKQSVNKLYKQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLR 337
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
QE KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+T +
Sbjct: 338 REQEHKGLDIVRRDWSQLAVMVGKAVLDEVLSEK-----PLEEKLDAVHAQLEKIKTQIA 392
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
G VPL L ITKQLT+ P+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT
Sbjct: 393 EGVVPLPLFVITKQLTRTPQEYANSASLPHVQVALRMNRERNRRYKKGDMVDYVICLDGT 452
Query: 972 SEAATQRAYNIEELKN--NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
+ AA QRAY+++ELK + KL++D NYYL QIHPVVTR++E +EGTDA RIAECLG+D
Sbjct: 453 TNAAMQRAYHLDELKTSEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMD 512
Query: 1030 TSLYRSQI----KESIQQSE-ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
+ +R +E+ +QSE E++L + Y+ C+ F F C+ +CK + +
Sbjct: 513 PTKFRQNAQRTQRENTEQSEGESLL---KTTLQLYRLCEPFRFQCV--TCKTEQLMASAY 567
Query: 1085 RLS-THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
R ++ + VL +C EC+ P YL + N+L M +Y+ ++Y+ WL C+ P C+
Sbjct: 568 RPGPSNSHIAVLQQCAKSECQTAPIQYLASVRNQLQLSMRQYVQRFYKNWLVCDHPDCNF 627
Query: 1144 LTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKF 1201
TR L K+ LC C L R YTE LY QL + ++ D+ K T P++
Sbjct: 628 NTRTHSLRKKSHRPLCQKCRSGSLLRQYTERDLYNQLCYLRFMFDLGKQ-TLQQKPTLTP 686
Query: 1202 DSETYMGYCKMKQHVERFLESSAYNIVDLKKLFSCEEKQPKLSRGVEREHV 1252
+ E Y + + V++ L+SS+Y I+ L KLF+ Q L V + +
Sbjct: 687 ELE--QAYQLLYETVDQQLQSSSYVIISLSKLFARSLAQMSLQPSVAQPQI 735
>gi|195445744|ref|XP_002070466.1| GK12074 [Drosophila willistoni]
gi|194166551|gb|EDW81452.1| GK12074 [Drosophila willistoni]
Length = 1468
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/697 (51%), Positives = 467/697 (67%), Gaps = 44/697 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN---------KKEGE 610
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK+ +
Sbjct: 766 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKRPVRRGGAANAIADNDATT 825
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PV 668
G+A GRKKAAY+GGLVLEP +G Y+KFI+LMDFNSLYPSIIQEYNICFTT+ PV
Sbjct: 826 APGDATTA-GRKKAAYAGGLVLEPMRGLYEKFILLMDFNSLYPSIIQEYNICFTTVQQPV 884
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
D+D + LPE + GILP ++K+LVESRR+VK LM P+LSS+L MQY IRQ
Sbjct: 885 ----DADELPI---LPESNAEPGILPLQLKRLVESRREVKKLMAAPDLSSELHMQYHIRQ 937
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
ALKLTANSMYGCLGF +SRFFAQ LAALVT KGREIL NT+ LV+ LNY+V+YGDTDSL
Sbjct: 938 MALKLTANSMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQKLNYDVVYGDTDSL 997
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
MI+ N+ DYD V+KIG QIK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK G
Sbjct: 998 MINTNITDYDQVYKIGYQIKQSVNKLYKQLELDIDGVFSCLLLLKKKKYAAVKVSKTPKG 1057
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
+ QE KG+D+VRRDWSQLA GK V+ +IL E+ L++++ +H +++I+
Sbjct: 1058 VLKREQEHKGLDIVRRDWSQLAIMLGKGVLDEILAEK-----PLEEKIDAVHHQLERIKD 1112
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE 968
+ VPL L ITKQLT+AP+EY + +LPHVQVALR+N +++ K+GD + Y+IC
Sbjct: 1113 QVLQSAVPLPLYVITKQLTRAPQEYANSASLPHVQVALRMNREKNRRYKKGDMVDYVICV 1172
Query: 969 DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
DG++ AA QRAY+++ELK N LK+D NYYL QIHPVVTR++E +EGTDA RIAECLGL
Sbjct: 1173 DGSTNAAMQRAYHLDELKTNENLKLDTNYYLGNQIHPVVTRMVEVLEGTDASRIAECLGL 1232
Query: 1029 DTSLYRSQI----KESIQQSE-ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ---VNTV 1080
D + +R + +E +QSE E++L + +++ C+ F F C+ +CK + T
Sbjct: 1233 DATKFRQNVQRVQREMTEQSEGESLL---KTTLQRFRLCEPFRFPCV--ACKTEQLMATA 1287
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPG 1140
P STH V VL C N EC P YL ++ N L + Y ++Y+ WL C+ P
Sbjct: 1288 YRPGPNSTH--VPVLQHCSNTECSTAPLQYLAYIRNHLQLSIKTYTQRFYKNWLVCDHPD 1345
Query: 1141 CSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS 1198
C+ TR + R LC C L R YTE LYQQL + ++ D+ K + +
Sbjct: 1346 CNYNTRTFTAKKEMRRPLCYKCKSGSLLRQYTEQDLYQQLCYLRFMFDLNKQQVQQKS-- 1403
Query: 1199 IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
E Y + + V++ L+SSAY ++ LKK+F
Sbjct: 1404 -TLTPELEQAYRYLYEAVDQQLQSSAYKVISLKKIFG 1439
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 292/617 (47%), Gaps = 116/617 (18%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
G R KRQ+IDK +FAA ++L+ LKG K + E D+ VYE V E+EY +R ++ +
Sbjct: 8 GPRVKRQRIDKNGRFAAMERLRQLKGTKNKCQVEEQVDD-VYEVVDEREYNKRAQEKYGN 66
Query: 104 -DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDK-----------RKKNKNIQNPNAK 151
DWI+DDG GY EDGR+ F+D+ E +++EK R+ +K ++ K
Sbjct: 67 GDWIEDDGT-GYTEDGRDFFEDEDEYSEEEQEKGKGKKAAKGQGKRPRESDKPVK---GK 122
Query: 152 GDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPP 211
I+ L +N V KK+ + + +DD+LAD+L ++ K EP
Sbjct: 123 ASIRNLFSNA-VPKKQDIKSSVKDDDILADILGDI--------------------KNEPG 161
Query: 212 APTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDD 271
A + +A P K+ +K+E K D V N+ Q +E DD
Sbjct: 162 DAQATKVIA----PAKMLRKVEAAAAK------------DYVNSFLSNIKSQKEERQKDD 205
Query: 272 G-LWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSI---EEKVDVTNVESVSSAVE 327
+ E++ N Q+ A V I+ I+ +I E+ +D + +E + E
Sbjct: 206 NEMLERILKPKETNPQKKTTPAAAPASVP-SIQPIKKDAIKKEEQDMDYSCLEDDENQFE 264
Query: 328 LSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRT---------------------- 365
L + P V K A TSEP+ S+
Sbjct: 265 LPSPTKPAVSVKSAASPPPAAAPPPPAPTSEPEDMSKLLNNWESICQMDDDFEKSVLTTD 324
Query: 366 --ADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQN 423
A S LA D E R ++ +A+ED K PG V+LFG++ S CV VQN
Sbjct: 325 QDASGSTSLANDEEQ---LRFWYWEAWEDPLKLPGEVFLFGRM-----ADGKSICVRVQN 376
Query: 424 IDRKIYLLPRSEHLK--TKEP----VSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFN 476
I+R +YLLPR L TKEP V++A +Y EFD QIA + K+ +F+SRK+ K +A +
Sbjct: 377 INRVLYLLPRQYLLDPITKEPTKQMVTVADIYKEFDTQIAAELKLDNFRSRKVSKNFANH 436
Query: 477 LPG--VPDLSEYLEVRYSAKCPALP--SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSW 532
G VP +YLEV Y K PA P ++ D+ +HVFGT ++ LE LL+RKIKGP W
Sbjct: 437 AIGIDVPQTCDYLEVHYDGKKPA-PNVANKKYDSIAHVFGTTTNSLERFLLDRKIKGPGW 495
Query: 533 LEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLS------------RTLMGGRSE 580
L+ + P+ +SWCK +V + + + + + G + RT M ++
Sbjct: 496 LQISGFKTSPAPMSWCKTDVTIIEPKNVELFHEKGKAAAAPPPLTLLALNVRTSMNPKTL 555
Query: 581 RNEFLLLHAF-HEKSYV 596
+NE ++ H + ++
Sbjct: 556 KNEICMISMLTHNRFHI 572
>gi|426395441|ref|XP_004063981.1| PREDICTED: DNA polymerase alpha catalytic subunit [Gorilla gorilla
gorilla]
Length = 1449
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/657 (52%), Positives = 456/657 (69%), Gaps = 32/657 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 772 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 831
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 832 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 891
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 892 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDI 950
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 951 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1010
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 1011 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1070
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1071 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1125
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1126 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1185
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1186 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1245
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C++F+ C P+C N +
Sbjct: 1246 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCERFKCPC--PTCGTENIYD 1299
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1300 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLTCEEPTC 1359
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDT 1196
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1360 RNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTT 1416
Score = 270 bits (689), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 308/583 (52%), Gaps = 63/583 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 26 RARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDW 84
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLL 158
I DD G GYVEDGREIFDDD+ED ++ K K +N N K +I+ +
Sbjct: 85 IVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMF 144
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
KK + V L+ DD+L D+L ++NT P + T +++ K+ + +
Sbjct: 145 IACAGKKTADKAVDLSKDDLLGDILQDLNTE-TPQI---TPPPVMILKKKRSIGASPNPF 200
Query: 219 LANFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ + + KI P+ ++ P PLK + D +V +S EE + G
Sbjct: 201 SMHTATAVP-SGKIASPVSRKEPPLTPVPLKRAEFAGD-------DVQVESTEEEQESGA 252
Query: 274 WEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
E + D+D + + D+ P AK Q E+ ++ ++++ D S + S
Sbjct: 253 ME-FEDGDFDEPMEAEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD-----SGKGTMSYLGS 305
Query: 332 PPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
P V C W+ Q + S E QV S LPL + ++VF ++LD
Sbjct: 306 FLPDV------SC--WDIDQEGDSSFSVQEVQVDS----SHLPLVKGADEEQVFHFYWLD 353
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEP 442
A+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P
Sbjct: 354 AYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTP 413
Query: 443 VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
+S+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA+ P LP D
Sbjct: 414 ISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQD 473
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
L G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E + + +
Sbjct: 474 LKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVN 533
Query: 562 ITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ V +T+ ++ +NE + + A S+ L
Sbjct: 534 VIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFAL 576
>gi|432930030|ref|XP_004081285.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Oryzias
latipes]
Length = 1460
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/696 (50%), Positives = 474/696 (68%), Gaps = 32/696 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK----EGEETGEA 615
++ITN+ GNVLSRTLMGGRSERNE+LLLHAFH+K+Y++PDK K + +GEE +A
Sbjct: 769 LQITNIAGNVLSRTLMGGRSERNEYLLLHAFHDKNYIVPDKPSFKKAQLEMGDGEEDVDA 828
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS- 674
KGK +KKAAYSGGLVL+PK GFYD+F++L+DFNSLYPSIIQE+NICFTT+ R Q+S
Sbjct: 829 GKGKRKKKAAYSGGLVLDPKVGFYDQFVLLLDFNSLYPSIIQEFNICFTTVQ-REAQNSR 887
Query: 675 -----DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQK 729
D + +P+ ++ GILP EI+KLVE R+QVK LMKQ +++ DL MQYDIRQK
Sbjct: 888 RKREEDESEEIPEIPDPGLEMGILPKEIRKLVERRKQVKQLMKQQDINPDLYMQYDIRQK 947
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLM 789
ALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS+M
Sbjct: 948 ALKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIM 1007
Query: 790 ISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGK 849
I+ N + VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + +G+
Sbjct: 1008 INTNSKSLEEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEHHGDGR 1067
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
QE+KG+D+VRRDW LA E G +VI QIL +QS D ++NI +H+ ++
Sbjct: 1068 YSVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSR-----DIIVENIQKHLVEVGER 1122
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
+ NG +PL L EI K LTK P++Y D+K+LPHV VAL +N+ +++K GDTISY+IC+D
Sbjct: 1123 VANGDIPLNLYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTISYLICKD 1182
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
G++ AA+QRAY +E+L+ L +D YYL+QQIHPVV+R+ EPIEG D V IA LGLD
Sbjct: 1183 GSTLAASQRAYALEQLQKQEGLSVDTQYYLAQQIHPVVSRICEPIEGIDGVLIATWLGLD 1242
Query: 1030 TSLYRSQIKESIQQSEENILG--VGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
S +RS + ++ + +LG V +E +Y+ C++F FTC PSC N + +
Sbjct: 1243 PSHFRSHQQHQREEEADGMLGAPVQLTDEERYRDCERFTFTC--PSCGTDNIYDNVFEGA 1300
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
+ V L C + C+ P + H+ NKL D+ ++I KYY GWL CED C + TRR
Sbjct: 1301 GNKVEPGLMRCCHIPCQSRPIDHPVHISNKLLLDIRRHIKKYYSGWLVCEDQACQNRTRR 1360
Query: 1148 CPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTP-------S 1198
P+ +C C + L Y+E LY QL F+ +I D A +K T
Sbjct: 1361 LPIAFSRHGPICPACSRATLRPEYSEKALYNQLCFYRFIFDWEHAFSKVLTQEERLLVNQ 1420
Query: 1199 IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+K E Y K+K+ E+ L +S Y+ V+L KLF
Sbjct: 1421 MKMQKEVYR---KLKEVPEKALAASGYSEVNLAKLF 1453
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 216/593 (36%), Positives = 305/593 (51%), Gaps = 96/593 (16%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
R++R+K +K + +A ++LK K G K KY+ +VYEEV E++Y++ V +RQEDDW
Sbjct: 29 RSRREKREKVGRKSALEQLKKAK-MGEKIKYKVEEFSHVYEEVDEEQYSKLVQERQEDDW 87
Query: 106 IDDDGGDGYVEDGREIFDDDIED-VPQKKEKHD-------KRKKNKNIQNPNAKGDIQKL 157
I DD G GYVEDGREIFDDD++D V +K+ K K K + PN I+ L
Sbjct: 88 IIDDDGTGYVEDGREIFDDDLDDDVVEKRGKGGAKGAESKKTVKKAAVTKPNT---IKSL 144
Query: 158 LANMPVKKKKKEEVQLNNDDVLADLL----SEVNTTIAP----TLK----LNTKTNEIVI 205
N VKK ++++ L+ DD+L D+L SE +AP TLK L + N I
Sbjct: 145 FMNSNVKKPAEKDIDLSKDDLLGDILQDLHSEKPAVLAPPPVITLKKKKSLGSPMNPFSI 204
Query: 206 ----PKEEP----PAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVE 257
PKE P A T + A P +EK ++ K+E + NDS+ E
Sbjct: 205 RHQMPKESPMTGLKAKTVRPPPAELRPPACPSPPLEKS-SEKVEKPKEEEEENDSLALDE 263
Query: 258 MNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVT 317
++ E + EP + K E + EA S V
Sbjct: 264 VDFDEPMETEP--------------------------EIKEETEAEAAPS--------VP 289
Query: 318 NVESVSSAVELSTSPPPQVVEKKEHKCAEW-EAIQTEPSTSEPQVHSRTADDSLPLATDH 376
VE LS +P P V W + +T S +VH ++ LPL
Sbjct: 290 KVEPKKEP--LSPAPLPSRVG------GHWGQEEETGASDVPAEVHVDSS--QLPLVEGE 339
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
+ + FR ++LDAFED Y QPG VYLFGKV+++ SH SCCV V+NI+R IYLLPR
Sbjct: 340 DGEPAFRFYWLDAFEDPYNQPGVVYLFGKVWIQSAKSHVSCCVTVKNIERTIYLLPREYK 399
Query: 437 LKTK------EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
K EPV + VY EF +++ ++K++ FKS+K+EK YAF +P VP+ EYL+++
Sbjct: 400 TNPKTGEVSGEPVGMMDVYQEFSELSEKFKVMKFKSKKVEKNYAFEIPDVPNQCEYLQIQ 459
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKY 550
YSA+ PALP DL G TFSH+FGT +S LE+ LL RKIKGP WL+ + +SWCK
Sbjct: 460 YSAEFPALPPDLKGATFSHIFGTNTSSLEHFLLSRKIKGPCWLDIKTPQMMHQPVSWCKV 519
Query: 551 EVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEF-----LLLHAFH 591
EV + + I + ++ +T+ ++ NE LL + FH
Sbjct: 520 EVLALRGDTISLVKDLPPPPLTVMSISLKTVQNPKTHHNEIVSLAALLHYGFH 572
>gi|443732880|gb|ELU17443.1| hypothetical protein CAPTEDRAFT_228337 [Capitella teleta]
Length = 1425
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/694 (50%), Positives = 472/694 (68%), Gaps = 49/694 (7%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG---------- 609
++ITN+CGN+++RTLMGGR+ERNEFLL HAF EK +++PDK YGK
Sbjct: 757 LQITNICGNIMARTLMGGRAERNEFLLNHAFTEKGFIVPDKVYGKKTNAAVQPVVDPDDE 816
Query: 610 --EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
++G+ + + R+K AY+GGLVLEPKKGFYD +I+L+DFNSLYPSIIQEYNICFTTI
Sbjct: 817 IDHDSGKKTQSQ-RRKPAYAGGLVLEPKKGFYDTYILLLDFNSLYPSIIQEYNICFTTIG 875
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
D P+ ++ GILP+EI+KLV+SRRQVK +MK P+LS DL MQYDIR
Sbjct: 876 RDTAAKDDEEDAVMECPDPSLEPGILPTEIRKLVQSRRQVKTMMKNPDLSPDLYMQYDIR 935
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF +SRF+A+PLAALVTAKGREIL+ TK LV+N+N +VIYGDTDS
Sbjct: 936 QKALKLTANSMYGCLGFTHSRFYAKPLAALVTAKGREILMKTKDLVQNMNLDVIYGDTDS 995
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+M++ N + + VFK+GN++K+E NKLY+ LE+DIDGVYK MLLLKKKKYAAL++ K N
Sbjct: 996 IMVNSNSTNMEEVFKLGNKVKTEVNKLYRLLEIDIDGVYKCMLLLKKKKYAALNMVK--N 1053
Query: 848 G-KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
G K +E+KG+D+VRRDW +LA EAGKFV+ QIL + S ++ ++NIH + ++
Sbjct: 1054 GDKYDAVREMKGLDIVRRDWCELAKEAGKFVVDQIL-----SGSSRENVVENIHAKLMEV 1108
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
+ G VP+ L ITK LTK PE+Y D+K+LPHVQVALRLN+ +KL+ GDT+ Y+I
Sbjct: 1109 GELVKGGDVPIDLYYITKSLTKNPEDYPDKKSLPHVQVALRLNSKGGRKLRSGDTVYYVI 1168
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A +QRAY+ +EL LKID +YYLS Q+HPVV+RL +PI+GTD+ RIAECL
Sbjct: 1169 CQDGSNLAPSQRAYHPDELTKREDLKIDTHYYLSHQVHPVVSRLCDPIDGTDSARIAECL 1228
Query: 1027 GLDTSLYRSQIKESIQQSEEN-ILGVGE-AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
GLD S YR + + + EE+ +LG + +EE ++ CD+ C P C + +++P
Sbjct: 1229 GLDASGYR---RAATRDDEEDALLGAAQLSEEERFMNCDRLLIKC--PKCSRDIVLDSPI 1283
Query: 1085 RLSTHGVVFVLDECINPECK--VPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
G+ L EC NP+CK + ++ + N L+ + K+I KYYEGWL CED C
Sbjct: 1284 A----GMKNPLLECPNPQCKLCIADRSHAHVIRNALTVAIRKHIQKYYEGWLHCEDVQCG 1339
Query: 1143 DLTRRCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
TR L + C C + L YT+ LY QL F+ Y+ + K+D+ K
Sbjct: 1340 LRTRNLSLIFAKGIPVCHQCQRGFLITEYTDTMLYDQLCFYRYVLE-----DKTDSSDSK 1394
Query: 1201 FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ +K V+ FL +SAY+ V+L KLF
Sbjct: 1395 LSA--------LKSTVDFFLNNSAYSHVNLSKLF 1420
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 209/596 (35%), Positives = 309/596 (51%), Gaps = 100/596 (16%)
Query: 45 GRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDD 104
GR++R ++DKT + AA ++LK K G K+KY+ +++VYEEV E+EY++ V +RQEDD
Sbjct: 23 GRSRRSRVDKTGRSAALERLKKSKQSGEKNKYDLINEDDVYEEVDEEEYSKIVRERQEDD 82
Query: 105 WIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPN--AKGDIQKLLANM- 161
WI DD G GYVEDGREIFD++ + K KK +NPN A G K + +M
Sbjct: 83 WIVDDDGSGYVEDGREIFDEEANEASASSTAKGKSKKASKSKNPNIRAPGSQPKSIKSMF 142
Query: 162 ----PVKKKKKEEVQLNNDDVLADLLSEVN----TTIAPTLKLNTKTNEIVIPKEEPPAP 213
KKK E V L +D +L D++SE++ ++AP +KL K+ AP
Sbjct: 143 AAAAVKPKKKIENVSLGDDAILGDIMSELHHGPSVSMAPPVKLKRKS-----------AP 191
Query: 214 TAKEYLANFSKPI-KVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDG 272
+ + + K K + P+ K PS ME ++ S+E +
Sbjct: 192 SGNPFASGIKKAAPKAKTSKPAPVMKMPS------------MEAKIPAKSDSQESGFESA 239
Query: 273 LWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSP 332
+M I ++D+ + ++V P Q +++ E + S +E +DV+ ++ + +
Sbjct: 240 ---EMDIGEFDSQEIQEEVRPTQ---DIKDEDLGDLS-QESMDVSGIDFEDDFLPAA--- 289
Query: 333 PPQVVEKKE---------------HKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHE 377
P V +KK H A WE S+ V LPL T+ +
Sbjct: 290 -PTVQDKKAGEKKNSSVLTELPDFHSNATWE---VNKGASDIPVDVVVDSSKLPLITNDD 345
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
++V RMF+LDA+ED YKQPG VYLFGKV++ +H HL
Sbjct: 346 GEQVLRMFWLDAYEDQYKQPGVVYLFGKVWIDSAKTH---------------------HL 384
Query: 438 KTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP 496
KTKEPV+ +Y EF D +A +YKI+ +KS K+EK+YAF++ +P SEYLEVRY A+
Sbjct: 385 KTKEPVTFIDLYQEFSDAVADKYKIMKYKSLKVEKEYAFDIADIPAQSEYLEVRYPAEHS 444
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLE--FPEAEKFPSRISWCKYEVQC 554
ALP+DL GDTFSH+FGT +S LE L+ER +KGP WL+ P+ P ISWCK E
Sbjct: 445 ALPNDLKGDTFSHIFGTTTSSLELFLIERGLKGPRWLDIKLPQLSHPP--ISWCKVEALV 502
Query: 555 NQMEKIRITN---------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ 601
Q + IR+ + V + RT+ ++ +NE + + + L DKQ
Sbjct: 503 TQPDYIRVLSASPPPPPPLVVMALNLRTVSNPKTHQNEIIGVSCLVHHRFPL-DKQ 557
>gi|383863019|ref|XP_003706980.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha catalytic
subunit-like [Megachile rotundata]
Length = 1380
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 335/680 (49%), Positives = 464/680 (68%), Gaps = 28/680 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT + GNV+SRTL GR+ERNE+LLLHAFH K Y+ PDK +N K+G+ E
Sbjct: 689 LQITCIAGNVISRTLTAGRAERNEYLLLHAFHSKQYITPDK---RNMKKGK-NDEGIXQS 744
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
GRKKAAY+GGLVLEPKKGFYDK I+LMDFNSLYPSIIQEYN+CFTT+P DS+ +L
Sbjct: 745 GRKKAAYTGGLVLEPKKGFYDKLILLMDFNSLYPSIIQEYNLCFTTVPGAAYADSEDLSL 804
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
PE + G++P+EI+KLVESR +VK LMK PN+S +L MQY+IRQ ALKLTANSMY
Sbjct: 805 ----PESHLKPGVIPTEIRKLVESRGEVKKLMKTPNISPELKMQYNIRQLALKLTANSMY 860
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG + RF+A+ LAALVTAKGREIL +TKSLVE LNYEVIYGDTDS+MI NV DYD
Sbjct: 861 GCLGASHCRFYAKGLAALVTAKGREILQHTKSLVEKLNYEVIYGDTDSIMICTNVLDYDE 920
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
VF +G +IK E NKLYK++ELDIDGV++Y+LLL+KKKYAA++++KL NG++ +QE+KG+
Sbjct: 921 VFSVGKKIKQEVNKLYKRVELDIDGVFRYLLLLQKKKYAAVTMTKLPNGQIELTQELKGL 980
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDW QLA + GK ++ Q+L +D S +DR++ I ++ + + V L+
Sbjct: 981 DIVRRDWCQLACDVGKKILDQLL-----SDGSDEDRIEQIFSLLQDVAASVRENQVSLSS 1035
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
L ITKQL+K P +Y D K HVQVALRLN + K GDT+ YIIC+DGT ++AT+RA
Sbjct: 1036 LVITKQLSKNPNDYPDAKQ-AHVQVALRLNKEGGRMWKAGDTVPYIICDDGTEKSATERA 1094
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+I+E K + LKIDVNYYL Q+ P+ R+ EPI+G D V +A LGL+ ++Y+S K
Sbjct: 1095 YHIDEYKKSDSLKIDVNYYLLSQVFPICLRICEPIQGIDDVLLAAHLGLE-NVYKS--KR 1151
Query: 1040 SIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECI 1099
I E I + E ++++C +F C + +C+ ++ + G L C
Sbjct: 1152 RIHDDENEIPLL--LNEERFRYCLPLKFNCRDENCQSEIIIKEVVTETPTGNQLSLASCS 1209
Query: 1100 NPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTR-LCT 1158
NP C + P+TY + N ++ + + I +YY+GWL+CE P C + T+ PLG K C
Sbjct: 1210 NPSCTLQPWTYHNVIQNAMTLAVREAITEYYDGWLECESPICGEQTQILPLGYKKHPTCR 1269
Query: 1159 TCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK---SDTPSIKFDSETYMGYCKMKQH 1215
C +LH+++++ +LY QL F+ ++ D++++ K S P ++ Y +K+
Sbjct: 1270 ECKDGRLHKMFSDTRLYNQLCFYLHLVDVSQSKYKNLLSQHPQGMREA-----YDSLKEA 1324
Query: 1216 VERFLESSAYNIVDLKKLFS 1235
+E+ L +A+++V L LFS
Sbjct: 1325 MEKMLRRNAFSVVCLDTLFS 1344
Score = 226 bits (577), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 257/529 (48%), Gaps = 99/529 (18%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
R+KRQK+DKT + +A +KLK LKG KHKYE ENVYEEV EKEY++ V++RQ DDW
Sbjct: 8 RSKRQKVDKTGRLSALEKLKQLKGS--KHKYEIDELENVYEEVDEKEYSKTVIERQSDDW 65
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNP--------NAKGDIQKL 157
I DDG GYVEDGREIFDDD++D E + +KNK + P KG+IQ +
Sbjct: 66 IVDDGNSGYVEDGREIFDDDLDD-----ESIQEARKNK-LAGPKKSKKDEKKKKGNIQNM 119
Query: 158 LANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKE 217
+ NMP KKK ++ L++D++L DL+SE+ P K +E
Sbjct: 120 IMNMP--SKKKVDIALDHDNILGDLMSELKKNDTP------KRSE--------------- 156
Query: 218 YLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE-QSKEEPVDDGLWEQ 276
++ +K +++ I + S + I ++S+ V++ +SKE D +
Sbjct: 157 -----TRTVKNNGQLQSVISNQSSS-QTIIDDDESIDNSSNTVSDIKSKENIKDPSASQI 210
Query: 277 MQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQV 336
++ + D SQ DV + E+QI IE + VS EL P P V
Sbjct: 211 IETESEDLSQFMGDV---NSDFEMQISNIEVSA-----------EVSDTTEL---PLPLV 253
Query: 337 VEKKEHKCAE---WEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDI 393
+ + W+A E +P + +P ++ + V +
Sbjct: 254 TNSDKEEVFRFYYWDA--CEDPFKQPGIVYLFGKVFVPSIKEYRSCCV----------TV 301
Query: 394 YKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFD 453
P +YL ++++K ++ + + L T E VY EF+
Sbjct: 302 KNVPRRIYLLPRLYIKTSSEENG----------------QEPQLNTIE-----DVYKEFN 340
Query: 454 QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGT 513
Q A + I +F+ K+ K YAF G P SEYLEVRYSA CPA+P D SG + VFGT
Sbjct: 341 QFANKVGIKEFRCSKVTKYYAFEQEGTPAKSEYLEVRYSANCPAMPFDYSGPSIERVFGT 400
Query: 514 KSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
+ LE LL+ER IKGP WL+ + SWCK +V C ++E I +
Sbjct: 401 TVNALELLLIERNIKGPCWLDIKCPLPTGVQTSWCKIKVNCMKIENISV 449
>gi|340719938|ref|XP_003398401.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Bombus
terrestris]
Length = 1462
Score = 634 bits (1634), Expect = e-178, Method: Compositional matrix adjust.
Identities = 337/689 (48%), Positives = 466/689 (67%), Gaps = 39/689 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT + GNV+SRTL GR+ERNE+LLLHAFH K+Y+ PDK+ K G+ +
Sbjct: 784 LQITCIAGNVMSRTLTAGRAERNEYLLLHAFHLKNYITPDKRVTKK-------GKNEENA 836
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
+KKAAY GGLVL+PKKGFYDK I+LMDFNSLYPSIIQEYN+CFTT+P + + ++
Sbjct: 837 SKKKAAYVGGLVLDPKKGFYDKLILLMDFNSLYPSIIQEYNLCFTTVPGAAYAEYEDLSI 896
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
PE ++ G++P+EI KLVESR +VK LMK PN+S +L MQY+IRQ ALKLTANSMY
Sbjct: 897 ----PESNLEFGVIPTEICKLVESRGEVKKLMKTPNISPELKMQYNIRQLALKLTANSMY 952
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG + RF+A+ LAALVTAKGREIL +TKSLVE LNYEVIYGDTDS+MI+ + +Y+
Sbjct: 953 GCLGATHCRFYAKGLAALVTAKGREILQHTKSLVEKLNYEVIYGDTDSIMINTGLLEYEE 1012
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
VF +G +IK E NKLYK++ELDIDGV++Y+LLL+KKKYAA+ ++KL NG++ +QE KG+
Sbjct: 1013 VFSVGKKIKQEVNKLYKRVELDIDGVFRYLLLLQKKKYAAVIMTKLPNGQIELTQEHKGL 1072
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDW QLA + G+ ++ +L +D S DDR++ I + + ++ VPL+
Sbjct: 1073 DIVRRDWCQLACDIGRKILDHLL-----SDKSCDDRIEQIFSILHDVAQNVRENQVPLSS 1127
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
L ITKQL+K P EY D K HVQVALRLN + K GDTI YIIC+DGT ++AT+RA
Sbjct: 1128 LIITKQLSKNPNEYPDTKQ-AHVQVALRLNKEGGRMWKAGDTIPYIICDDGTEKSATERA 1186
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+I+E K + LKIDVNYYL QI P+V R+ EPIEG D V +A+CLGL+ ++Y+S +
Sbjct: 1187 YHIDEYKKSDSLKIDVNYYLLSQIFPIVLRICEPIEGIDDVLLAKCLGLE-NIYKS--RR 1243
Query: 1040 SIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSC------KQVNTVEAPTRLSTHGVVF 1093
I Q +I + EE ++++C +F C + C K V E RLS
Sbjct: 1244 IIHQEHADIPLL--MEEDRFRYCLPLKFNCRSEKCQSEIIIKDVVNEELGNRLS------ 1295
Query: 1094 VLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLK 1153
L C N ECKV P+TY + N ++ + + + +YY GWL+CE+P C D T+ PL +
Sbjct: 1296 -LASCSNSECKVQPWTYANTIQNVVTLSIRELVNEYYNGWLECENPLCGDQTQWIPLDFE 1354
Query: 1154 TR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCK 1211
+ +C C+ LHRV+T+ +LY QL F+ ++ D+ ++ KS ++ Y
Sbjct: 1355 SLYPICRKCNDGDLHRVFTDTKLYNQLCFYLHLFDVNQSKYKSLLS--QYPQGMREAYDS 1412
Query: 1212 MKQHVERFLESSAYNIVDLKKLFSCEEKQ 1240
+K+ VE+ L +A+++V L +FS E++
Sbjct: 1413 LKEAVEKMLRRNAFSVVCLDTIFSNNEQE 1441
Score = 316 bits (809), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 226/607 (37%), Positives = 330/607 (54%), Gaps = 84/607 (13%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE 102
+ GRAKRQK DKT + +A +KLK LKG KHKYE ENVYEEV EKEY++ V++RQ
Sbjct: 5 QSGRAKRQKFDKTGRLSALEKLKQLKGS--KHKYEVDELENVYEEVDEKEYSKTVIERQN 62
Query: 103 DDWIDDDGGDGYVEDGREIFDDDIEDVP-QKKEKHD-KRKKNKNIQNPNAKGDIQKLLAN 160
DDWI DDG GY+EDGREIFDDD++D Q+ KH + + KG+IQ +L N
Sbjct: 63 DDWIIDDGESGYIEDGREIFDDDLDDESIQEARKHKVAGPRKSKKDHAKKKGNIQNMLMN 122
Query: 161 MPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLA 220
M K+K + +L++D +L DL+SE+ K ++I P + P ++
Sbjct: 123 M--SSKRKTDAKLDDDTILGDLMSEL------------KKDDI--PTQSKPKTVSRNKFC 166
Query: 221 NFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEV-----EMNVAEQSK-----EEPVD 270
+ P EK +EK I+ K + ND + + ++N+ +Q++ E
Sbjct: 167 --TTPKLSEKNVEKKIELISEYEKIQCDDNDDDLVMFDKPKKVNMHKQAELIAQIENFTS 224
Query: 271 DGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELST 330
+ Q IDD DNS+ +L Q++ +L+ +I SQ IE + + N+E S+ E T
Sbjct: 225 NENSSQTIIDDPDNSEVR--ILSMQSEKDLKETSI-SQVIETESE--NLEDFSADFEDDT 279
Query: 331 -----SPPP----QVVEKK-----EHKCAEWEA-----------IQTEPSTSEPQVHSRT 365
P P ++++ K ++K AE E I+ E S ++ + T
Sbjct: 280 IDHNEKPKPSTNKEIIKNKLTIQMKNKDAEEENFDLENFNKSLDIEFETQISNIEMPTDT 339
Query: 366 ADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNID 425
++SLPL T+ ++VFR ++ DA+ED YKQPG VYLFGKVFV + SCC+ V+NI
Sbjct: 340 TEESLPLVTNANKEEVFRFYWWDAYEDPYKQPGVVYLFGKVFVPSIKEYRSCCLTVKNIP 399
Query: 426 RKIYLLPRSEHLKT--------KEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNL 477
R+IYLLPR ++KT ++ +I VY EF+Q A + I +F+S K+ K YAF
Sbjct: 400 RRIYLLPRV-YVKTSLKGNNDEEQLNTIENVYKEFNQFANKLGIKEFRSCKVSKNYAFEQ 458
Query: 478 PGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPE 537
G P S+YLEVRYSA P +PSD SG + VFGT + LE L+ER IKGP WL+
Sbjct: 459 EGTPAKSDYLEVRYSANYPPVPSDYSGPSIESVFGTTVNSLELFLIERNIKGPCWLDIKS 518
Query: 538 AEKFPSRISWCKYEVQCNQMEKIRITN--------VCGNVLSRTLMGGRSERNEFLLL-- 587
+ SWCK +V C +ME I + + V + RT + ++NE +++
Sbjct: 519 PLPTGVQTSWCKIKVNCMKMENISVFSESQTLPPLVITTLNIRTSFNAKLQQNEIVMITI 578
Query: 588 ---HAFH 591
H +H
Sbjct: 579 LMHHKYH 585
>gi|312377574|gb|EFR24380.1| hypothetical protein AND_11087 [Anopheles darlingi]
Length = 1597
Score = 634 bits (1634), Expect = e-178, Method: Compositional matrix adjust.
Identities = 347/709 (48%), Positives = 481/709 (67%), Gaps = 49/709 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQY------GKNKKEGEETG 613
++IT + GN+++RTL GGR+ERNEFLLLHAF+E+ Y+LPDK G K +
Sbjct: 830 LQITQIAGNLMNRTLHGGRAERNEFLLLHAFNERDYILPDKANPFQSGGGPKGKGADGGD 889
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRML 671
A+K K + KAAY+GGLVL+P KGFYDKF++LMDFNSLYPSIIQEYNICFTT+ PV
Sbjct: 890 GADKRKPKNKAAYAGGLVLDPIKGFYDKFVLLMDFNSLYPSIIQEYNICFTTVLPPVVGK 949
Query: 672 QDSDITTLCEYLPEHQVD--------TGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+ +D + PE + GILP +I+KLVESRR VK LMK P+L+ +L MQ
Sbjct: 950 ELNDGQEEGQLNPELVAEPTILATNEIGILPRQIRKLVESRRAVKQLMKAPDLTPELAMQ 1009
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYG 783
Y+IRQ ALKLTANS+YGCLG+ SRF+AQ LA+L+T KGREILLNTKS+VE +NY+VIYG
Sbjct: 1010 YNIRQMALKLTANSLYGCLGYTRSRFYAQHLASLITQKGREILLNTKSIVERMNYQVIYG 1069
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
DTDS+MI+ N+ DY+ VFKIG IK NK Y+ LELD+DG+YKY+LLLKKKKYAA++IS
Sbjct: 1070 DTDSIMINTNITDYEQVFKIGASIKQHVNKTYRCLELDVDGIYKYLLLLKKKKYAAVTIS 1129
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
K ++G+++C+QE+KG+D+VRRDWS++A AGK ++ QIL +D S+DDR+ NIH +
Sbjct: 1130 KKADGEIVCAQELKGLDIVRRDWSRVAVMAGKIILHQILS----SDASMDDRIGNIHVQL 1185
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTIS 963
+K++ DL G + L LLEITKQLT++ EY D LPHVQVALR+N ++ K+GD ++
Sbjct: 1186 EKLKDDLQAGTLSLHLLEITKQLTRSLNEYGDAGQLPHVQVALRMNRQRNRNYKRGDMVN 1245
Query: 964 YIICEDGTSEAATQRAYNIEELK---NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
YIIC+DGTS A +RAY+I+E++ N KL++DV YYL+QQIHPVV R+ EP+EGTDA
Sbjct: 1246 YIICQDGTSAPAMKRAYHIDEVRDPANAEKLQVDVEYYLAQQIHPVVFRICEPLEGTDAC 1305
Query: 1021 RIAECLGLDTSLYRSQIK------ESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSC 1074
R+A CLGLD YR+ + ++ + E+++ ++ +Y+ C +FEFTC+ +C
Sbjct: 1306 RLAICLGLDPIKYRTMLSAGSGGDHAVTEHGESLI---KSATERYRLCHRFEFTCV--AC 1360
Query: 1075 KQVNTVEAPTRLSTHGV-VFVLDECINPE---CKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
K N V + R +G V + C N E C V P YLP ++N+L+ + I ++Y
Sbjct: 1361 KTKNPVASGFRPGANGRHRSVFERCANEEGGGCAVLPVQYLPAIVNELTLAIRADIRRFY 1420
Query: 1131 EGWLKCEDPGCSDLTRRCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDI- 1187
W+ C++P C+ TR+ L C C K L Y+E LY QL +++Y+ D+
Sbjct: 1421 ARWMVCDNPICNRNTRQYAHVASKNLPYCLHCQKGLLVLQYSETDLYTQLCYYNYMFDLE 1480
Query: 1188 --TKALTKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ +TK +P I+ Y ++K +ERF + S Y +V+L +
Sbjct: 1481 QYSPKMTKVLSPDIR------NMYAQLKDTIERFQQRSKYGVVNLSSFY 1523
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 6/184 (3%)
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVK-ENNSHSSCCVIVQNIDRKIYLLPR 433
D V + +F DA+ D K G +YLFG+V V + N++ S CV VQN+DR ++LL R
Sbjct: 403 DTAGSDVMKFWFWDAWNDPNKCQGELYLFGRVAVAGKRNAYQSICVHVQNVDRCLFLLAR 462
Query: 434 SEHLKTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPG----VPDLSEYLE 488
+ KT +PVS+ +VY+EF + I+ + I ++SR + K +A+ VP SEYLE
Sbjct: 463 EQDAKTGQPVSMLEVYNEFSNDISNKLNIAKYRSRVVTKSFAYTSATSSLQVPVSSEYLE 522
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWC 548
VRYSAK P P D T +H+FGT ++ +E LLERK+KGP W+E A + ++ SWC
Sbjct: 523 VRYSAKLPPPPLDRRYRTIAHIFGTNTNVVEQFLLERKVKGPCWMELRGATQRETKTSWC 582
Query: 549 KYEV 552
K EV
Sbjct: 583 KLEV 586
Score = 113 bits (283), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 99/151 (65%), Gaps = 9/151 (5%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
R+KR++IDK +FAA ++LK K GVK+KYE ENVY+EV E+EY + V +R DDW
Sbjct: 14 RSKRRRIDKGGRFAALERLKKTKEAGVKNKYEVNEVENVYDEVDEREYAKIVNQRMHDDW 73
Query: 106 IDDDGGDGYVEDGREIFD-DDIEDVPQ----KKEKHDKRKKNKNIQNPN-AKGDI--QKL 157
++DD G GYVE+GREIFD D+++ +P K + D+RK K +++ + G + +K
Sbjct: 74 VEDDDGLGYVENGREIFDEDELDPLPSSNKGKGKGKDERKGTKRVRDSDPTAGPVTGRKS 133
Query: 158 LANMPVKKKKKEEVQLNNDDVLADLLSEVNT 188
L N +++ + ++ +DD LAD+L E+ +
Sbjct: 134 LKNY-FNREQASKAKVEDDDALADILGEIKS 163
>gi|350408388|ref|XP_003488387.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Bombus
impatiens]
Length = 1465
Score = 634 bits (1634), Expect = e-178, Method: Compositional matrix adjust.
Identities = 341/693 (49%), Positives = 469/693 (67%), Gaps = 39/693 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT + GNV+SRTL GR+ERNE+LLLHAFH K+Y+ PDK+ K K E T
Sbjct: 781 LQITCIAGNVMSRTLTAGRAERNEYLLLHAFHLKNYITPDKRVTKKGKNEENTS------ 834
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
+KKAAY GGLVL+PKKGFYDK I+LMDFNSLYPSIIQEYN+CFTTIP + + ++
Sbjct: 835 -KKKAAYVGGLVLDPKKGFYDKLILLMDFNSLYPSIIQEYNLCFTTIPGAAYAEYEDLSI 893
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
PE ++ GI+P+EI KLVESR +VK LMK PN+S +L MQY+IRQ ALKLTANSMY
Sbjct: 894 ----PESNLEFGIIPTEICKLVESRGEVKKLMKTPNISPELKMQYNIRQLALKLTANSMY 949
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG + RF+A+ LAALVTAKGREIL +TKSLVE LNYEVIYGDTDS+MI+ + +Y+
Sbjct: 950 GCLGATHCRFYAKGLAALVTAKGREILQHTKSLVEKLNYEVIYGDTDSIMINTGLLEYEE 1009
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
VF +G +IK E NKLYK++ELDIDGV++Y+LLL+KKKYAA+ ++KL NG++ +QE KG+
Sbjct: 1010 VFSVGKKIKQEVNKLYKRVELDIDGVFRYLLLLQKKKYAAVIMTKLPNGQIELTQEHKGL 1069
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDW QLA + G+ ++ +L +D S DDR++ I + + ++ VPL+
Sbjct: 1070 DIVRRDWCQLACDVGRKILDHLL-----SDKSCDDRIEQIFSILHDVAQNVRENQVPLSS 1124
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
L ITKQL+K P EY D K + HVQVALRLN + K GDTI YIIC+DGT ++AT+RA
Sbjct: 1125 LIITKQLSKNPNEYPDTKQV-HVQVALRLNKEGGRMWKAGDTIPYIICDDGTEKSATERA 1183
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+I+E K + LKIDVNYYL QI P+V R+ EPIEG D V +A+CLGL+ ++Y+S +
Sbjct: 1184 YHIDEYKKSDSLKIDVNYYLLSQIFPIVLRICEPIEGIDDVLLAKCLGLE-NIYKS--RR 1240
Query: 1040 SIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSC------KQVNTVEAPTRLSTHGVVF 1093
I Q +I + EE ++++C +F C + C K V E RLS
Sbjct: 1241 IIHQEHADIPLL--MEEDRFRYCLPLKFNCRSEKCQSEIIIKDVVNEELGNRLS------ 1292
Query: 1094 VLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLK 1153
L C N ECKV P+TY + N ++ + + + +YY G L+CE+P C D T+ PL +
Sbjct: 1293 -LASCSNSECKVQPWTYANTIQNVVTLSIRELVNEYYNGCLECENPLCGDQTQWIPLDFE 1351
Query: 1154 TR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCK 1211
+ +C C+ LHRV+T+ +LY QL F+ ++ D+ ++ KS ++ Y
Sbjct: 1352 SLYPICRKCNDGDLHRVFTDTKLYNQLCFYLHLFDVNQSKYKSLLS--QYPQGMREAYDS 1409
Query: 1212 MKQHVERFLESSAYNIVDLKKLFSCEEKQPKLS 1244
+K+ VE+ L +A+++V L +FS ++Q ++S
Sbjct: 1410 LKEAVEKMLRRNAFSVVCLDTIFSNNDEQEEIS 1442
Score = 311 bits (797), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 325/600 (54%), Gaps = 73/600 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
GRAKRQK DKT + +A +KLK LKG KHKYE ENVYEEV EKEY++ V++RQ D
Sbjct: 4 AGRAKRQKFDKTGRLSALEKLKQLKGS--KHKYEVDELENVYEEVDEKEYSKTVIERQND 61
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-QKKEKHD-KRKKNKNIQNPNAKGDIQKLLANM 161
DWI DDG GY+EDGREIFDDD++D Q+ KH + + KG+IQ +L NM
Sbjct: 62 DWIIDDGESGYIEDGREIFDDDLDDESIQEARKHKVAGPRKSKKDHAKKKGNIQNMLMNM 121
Query: 162 PVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTL---KLNTKTNEIVIPK-EEPPAPTAKE 217
K+K + +L++D +L DL+SE+ PT K + PK E E
Sbjct: 122 --SSKRKTDAKLDDDSILGDLMSELKKDDIPTQSKPKTVLRNKFCTTPKLSEKNVEKKIE 179
Query: 218 YLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQM 277
++ + K ++ + + I +P +K K +S+ ++E + ++ + +
Sbjct: 180 LISGYEK-MQCDDDDDLVIFDKPEKVKMH-KQAESITQIENFTSNENSSQTI-------- 229
Query: 278 QIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSS-----AVELSTSP 332
IDD DNS+ +L Q++ +L+ +I SQ IE + + N+E S+ +++ + P
Sbjct: 230 -IDDSDNSEVR--ILSMQSEKDLKETSI-SQVIETESE--NLEDFSADFEDDSIDHNEKP 283
Query: 333 PPQVVE---------KKEHKCAEWEA-----------IQTEPSTSEPQVHSRTADDSLPL 372
P + + + ++K AE E I+ E S ++ + T + LPL
Sbjct: 284 KPSINKEFIKNKSTIQMKNKDAEEENFDLENFNKSLDIEFETQISNIEMPTDTTEVPLPL 343
Query: 373 ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
T+ ++VFR ++ DA+ED YKQPG VYLFGKVFV + SCC+ V+NI R+IYLLP
Sbjct: 344 VTNANKEEVFRFYWWDAYEDPYKQPGVVYLFGKVFVPSIKEYRSCCLTVKNIPRRIYLLP 403
Query: 433 RSEHLKT--------KEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLS 484
R ++KT ++ +I VY EF+Q A + I +F+S K+ K YAF G P S
Sbjct: 404 RV-YVKTSLKGNDDEEQLNTIEDVYKEFNQFANKLGIKEFRSCKVSKNYAFEQEGTPAKS 462
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR 544
+YLEVRYSA P +PSD SG + VFGT + LE L+ER IKGP WL+ +
Sbjct: 463 DYLEVRYSANYPPVPSDYSGPSIESVFGTTVNSLELFLIERNIKGPCWLDIKSPLPTGVQ 522
Query: 545 ISWCKYEVQCNQMEKIRITN--------VCGNVLSRTLMGGRSERNEFLLL-----HAFH 591
SWCK +V C +ME I + + V + RT + ++NE +++ H +H
Sbjct: 523 TSWCKIKVNCMKMENISVFSESQTLPPLVITTLNIRTSFNAKLQQNEIVMITILMHHKYH 582
>gi|444706975|gb|ELW48287.1| DNA polymerase alpha catalytic subunit [Tupaia chinensis]
Length = 1414
Score = 633 bits (1633), Expect = e-178, Method: Compositional matrix adjust.
Identities = 356/702 (50%), Positives = 466/702 (66%), Gaps = 49/702 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 730 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 789
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 790 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVSSE 849
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 850 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 908
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREI N EVIYGDTD
Sbjct: 909 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREI-----------NLEVIYGDTD 957
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N D + VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 958 SIMINTNSTDLEEVFKLGNKVKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1017
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + I
Sbjct: 1018 DGNYFTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIHI 1072
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1073 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKVGDTVSYVI 1132
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1133 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1192
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C+K + C P+C N +
Sbjct: 1193 GLDPTQFRVH---HYHKDEENDTVLG-GPAQLTDEEKYKDCEKLKCPC--PACGTENIYD 1246
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ L C N +CK P ++ L NKL D+ + I KYY+GWL CE+P C
Sbjct: 1247 NVLDGLGTDMEPSLYRCSNIDCKASPLAFMVQLNNKLIVDIRRCIKKYYDGWLICEEPTC 1306
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK-SDTPS 1198
+ TR PL LC C K L Y++ LY QL F+ YI D+ AL K +D
Sbjct: 1307 RNRTRHLPLHFSRNGPLCPACMKATLRPEYSDKSLYTQLCFYRYIFDVDYALEKLTDHEK 1366
Query: 1199 IKFDSETYM-----GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K + ++ Y K+K VE FL S Y+ V+L KLF+
Sbjct: 1367 DKLKKQFFLPKVCQDYKKLKNTVELFLSRSGYSEVNLSKLFA 1408
Score = 257 bits (657), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 201/597 (33%), Positives = 297/597 (49%), Gaps = 87/597 (14%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 21 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDD 79
Query: 104 DWIDDDGGDGYVEDGREIFDDDI-----------EDVPQKKEKHDKRKKNKNIQNPNAKG 152
DWI DD G GY EDGREIFDDD+ +D + + K + K + PN
Sbjct: 80 DWIVDDDGIGYQEDGREIFDDDLEDDALDTSGKGKDSSKVRSKDKRNVKKPAVTKPN--- 136
Query: 153 DIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT-----TIAPTLKLNTKT------- 200
+I+ + KK + + L+ DD+L D+L ++NT T P ++L ++
Sbjct: 137 NIKSMFIASAGKKTADKAIDLSKDDLLGDILQDLNTGASQVTPPPVIRLKKRSIGASLNP 196
Query: 201 NEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNV 260
+ PK P TA + E P+ P P+K S + V +
Sbjct: 197 FSVHTPKAVPSGKTAPPVF-----------RKEPPLT--PIPVKRAEFSGELVQTEHIED 243
Query: 261 AEQSKEEPVDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKVELQ----IEAIESQSIEEKV 314
++S +DG D+D + D+ P AK Q E ++ ++ K
Sbjct: 244 EQESGMMEFEDG--------DFDEPMDAEEVDMEPVAAKTWDQENEPAEGVKHEADPGKG 295
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLAT 374
+ +ES V W+ Q + S Q + LPL
Sbjct: 296 TTSYLESFLPDVSC------------------WDIGQEDDSNFSTQ-EVKVDSSHLPLVK 336
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
+ +VF+ ++LDA+ED Y QPG ++FGKV ++ +H SCCV+V+NI+R +Y LPR
Sbjct: 337 GTDGDQVFQFYWLDAYEDQYNQPGIAFVFGKVRIESAKTHVSCCVMVKNIERTLYFLPRE 396
Query: 435 EHL------KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYL 487
+ +T PV++ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYL
Sbjct: 397 MKIDLNTGKETGTPVTMKDVYDEFDEKIATKYKIMKFKSKIVEKNYAFEIPDVPEKSEYL 456
Query: 488 EVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISW 547
EVRYSA+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISW
Sbjct: 457 EVRYSAEGPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNPPISW 516
Query: 548 CKYEVQCNQMEKIRITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
CK E + + + + G V+S +T+ + +NE + + A S+ L
Sbjct: 517 CKVEAIALKPDLVNVIKDVGPPPLVVMSFSMKTMQNAKYHQNEVIAVVALVHHSFAL 573
>gi|195055235|ref|XP_001994525.1| GH17298 [Drosophila grimshawi]
gi|193892288|gb|EDV91154.1| GH17298 [Drosophila grimshawi]
Length = 1481
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 334/701 (47%), Positives = 457/701 (65%), Gaps = 47/701 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y+ PDKQ + + + N
Sbjct: 776 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIAPDKQPQRRGAAVKAEADPNATT 835
Query: 620 GRKKAAYSG-------------GLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI 666
G + GLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT
Sbjct: 836 GNDTTVATTGAGAARKKAAYAGGLVLEPLRGLYEKYVLLMDFNSLYPSIIQEYNICFTT- 894
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
V+ D+D + LP+ + GILP ++++LVESRR+VK LM P+LS +L MQY I
Sbjct: 895 -VQQPHDADQLPV---LPDSSAEPGILPQQLRRLVESRREVKKLMAVPDLSPELHMQYHI 950
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQ ALKLTANSMYGCLGF +SRFFAQ LAALVT KGREIL+NT+ LV+ LNY+V+YGDTD
Sbjct: 951 RQMALKLTANSMYGCLGFAHSRFFAQHLAALVTHKGREILVNTQQLVQKLNYDVVYGDTD 1010
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
SLMI+ N+ DYD V++IG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK +
Sbjct: 1011 SLMINTNITDYDQVYRIGHAIKQSVNKLYKQLELDIDGVFACLLLLKKKKYAAVKLSKNA 1070
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
G + E KG+D+VRRDWSQ+A GK V+ ++L E+ L+D+L +H + +I
Sbjct: 1071 KGVLRREHEYKGLDIVRRDWSQVAIMVGKAVLDEVLAEK-----PLEDKLDAVHAQLGRI 1125
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
+ ++ VPL L ITKQLT+AP+EY + +LPHVQVA+R+N ++++ K+GD + Y+I
Sbjct: 1126 KDQIEQSAVPLPLYVITKQLTRAPQEYANSASLPHVQVAMRMNREHNRRYKKGDMVDYVI 1185
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C DGT+ AA QRAY+++ELK + LK+D NYYLS QIHPVVTR++E +EGTDA RIAECL
Sbjct: 1186 CLDGTTNAAMQRAYHLDELKGSETLKLDTNYYLSNQIHPVVTRMVEVLEGTDASRIAECL 1245
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGEAEEVK------YQFCDKFEFTCMNPSCKQ---V 1077
G+D S +R + ++ E E E ++ Y+ C+ F F C+ +CK +
Sbjct: 1246 GMDASKFRQNAQRIQRERTEE----AEGESLQKTTLQLYRLCEPFRFNCV--ACKTEQLM 1299
Query: 1078 NTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCE 1137
+ P S+H V VL +C+N EC+ P YL + N+L + Y+ ++Y WL C+
Sbjct: 1300 ASAYRPGPNSSH--VPVLQQCVNAECQTSPLQYLVSIRNQLQLRIRGYVQRFYRNWLVCD 1357
Query: 1138 DPGCSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITK-ALTKS 1194
P C+ TR + L+ R LC C + R Y+E LY QL + ++ D+ K LT+
Sbjct: 1358 HPDCNYNTRSYSIRLELRRPLCLKCSSGAMLRQYSERDLYNQLCYLRFMFDLNKQQLTQK 1417
Query: 1195 DTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
T E Y + VE+ +SS Y ++ L +F+
Sbjct: 1418 PT----LTPELEQAYQLLLDTVEQQFQSSGYVVISLGNIFA 1454
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 293/607 (48%), Gaps = 85/607 (14%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
G R KRQ+IDK+ +FAA ++LK LKG K + E D+ VYE V E+EY +R ++
Sbjct: 7 GPRVKRQRIDKSGRFAALERLKGLKGTKNKCEVEDKVDD-VYEVVDEREYAKRANEKYGG 65
Query: 104 DWIDDDGGDGYVEDGREIFDDDIE---------DVPQKKEKHDKRKKNKNIQNPNAKGDI 154
DWI++DG GY EDGR+ F+D+ E + QKK + K++ + K I
Sbjct: 66 DWIEEDGT-GYAEDGRDFFEDEDEYSDGGNEQTNGKQKKVNNAKKRPRDTEKPAKGKASI 124
Query: 155 QKLLAN-MPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTN-----EIVIPKE 208
+ L +N +P K K V+ +DD+LAD+L E+ A + + +IV
Sbjct: 125 RNLFSNAVPRKTDIKNSVK--DDDILADILGEIKQEPAGESSMLQQQKIIAPAKIVAATR 182
Query: 209 EPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKS----------NDSVMEVEM 258
+ A AKEY+ +F IK++ E+ KK + DE+ N + +
Sbjct: 183 KSEAVAAKEYMNSFLTNIKMQ---EQQRKKSDAASDDEMLDRILQPKAAIPNKKITPIVP 239
Query: 259 NVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTN 318
VA Q K E + + EQ + QQT+ + +L +E D
Sbjct: 240 TVAAQIKREQIAQSVEEQPK-------QQTEAAAADHCDNDLDFSCLED-------DENQ 285
Query: 319 VESVSSAVELSTSPPPQVVEKKEHKCAE----WEAIQTEPSTSEPQVHSRTADDSLPLAT 374
+E +S + P V + + ++ WE+I E V + A+ S
Sbjct: 286 LEPTASIAKPEPKASPAVAKPEADDMSKLLSNWESICQMDDDFEKSVMASEAETSA--GN 343
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
D + + R ++ +A+ED K PG V+LFG+ S CV VQNI+R +YLLPR
Sbjct: 344 DPVDVEQLRFWYWEAWEDPIKLPGEVFLFGRT-----PDGKSICVRVQNINRVLYLLPRQ 398
Query: 435 EHL------KTKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPG--VPDLSE 485
L TK+ V+ A +Y EFD IAT+ K+ F+SRK+ K +A + G VP +
Sbjct: 399 YLLDPITKEHTKQKVTAADMYKEFDTHIATELKLETFRSRKVSKSFANHAIGIDVPQTCD 458
Query: 486 YLEVRYSAKCPALPSDLSG--DTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS 543
YLEV Y K PA P+ L+ D+ +H+FG ++ LE LLERKIKGP WL+ P+
Sbjct: 459 YLEVHYDGKKPA-PNMLNKKYDSIAHIFGASTNALERFLLERKIKGPCWLQISGFNVNPA 517
Query: 544 RISWCKYEVQCNQMEKIR-------------ITNVCGNVLSRTLMGGRSERNEFLLLHAF 590
ISWCK +V + + + IT + NV RT M ++ RNE ++
Sbjct: 518 AISWCKTDVTIAEPKNVEVLQEQGKPTPPPAITLLTLNV--RTSMNPKTLRNEICMISML 575
Query: 591 -HEKSYV 596
H + ++
Sbjct: 576 THNRFHI 582
>gi|431895111|gb|ELK04902.1| DNA polymerase alpha catalytic subunit [Pteropus alecto]
Length = 1483
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 341/688 (49%), Positives = 455/688 (66%), Gaps = 61/688 (8%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGR+ERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 793 LQITNIAGNIMSRTLMGGRAERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 852
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 853 DNNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 912
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ +D GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 913 AQKVTEDEEQEQIPE-LPDPSLDMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 971
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 972 RQKALKLTANSMYGCLGFSFSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1031
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S
Sbjct: 1032 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTS 1091
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1092 DGNYSTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1146
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1147 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1206
Query: 967 CE---------------------------------DGTSEAATQRAYNIEELKNNSKLKI 993
C+ DG++ +A+QRAY E+L+ L I
Sbjct: 1207 CQMHVKYSPVDRKDFLVFGTEYTKSELLSLFLAKRDGSNLSASQRAYAPEQLQKQDNLTI 1266
Query: 994 DVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGE 1053
D YYL+QQIHPVV R+ EPI+G DA+ IA LGLD + +R + + E ++L G
Sbjct: 1267 DTQYYLAQQIHPVVARICEPIDGIDAILIASWLGLDPTQFR--VHHYHKDEENDVLLGGP 1324
Query: 1054 AE---EVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTY 1110
A+ E KY+ C++F+ C P+C N ++ S V N +CK P +
Sbjct: 1325 AQLTDEEKYRDCERFKCPC--PACGIENIYDSVFECSVSCFFLVPFYIFNIDCKTSPLNF 1382
Query: 1111 LPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTR--LCTTCHKYKLHRV 1168
+ L NKL D+ +YI KYY+GWL CE+P C + TR PL LC C K L
Sbjct: 1383 MVQLNNKLILDIRRYIRKYYQGWLICEEPTCRNRTRHLPLQFSRNGPLCQVCMKATLRPE 1442
Query: 1169 YTELQLYQQLSFFHYICDITKALTKSDT 1196
Y++ LY QL F+ YI D+ AL K T
Sbjct: 1443 YSDKSLYTQLCFYRYIFDVDYALEKLTT 1470
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 205/613 (33%), Positives = 303/613 (49%), Gaps = 92/613 (15%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K K + A ++LK K G K+KYE +VYEE+ E++Y++ V RQ+D
Sbjct: 18 ASRSRREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTSVYEEIDEEQYSKLVQARQDD 76
Query: 104 DWIDDD-----------------------------GGDGYVEDGREIFDDDIEDVPQ--- 131
DWI DD G GYVEDGREIFDDD+ED
Sbjct: 77 DWIVDDVSWYSKHTIKHPIVANFDAVDQIVSLADLDGIGYVEDGREIFDDDLEDDALDSH 136
Query: 132 ------KKEKHDKRK-KNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLS 184
K DKR K + PN DI+ + KK ++ V L+ D +L D+L
Sbjct: 137 EKGKDAKVHNKDKRHVKKAAVTRPN---DIKSMFIASAGKKTTEKAVDLSKDGLLGDILQ 193
Query: 185 EVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPS--- 241
++NT P + L +++ K+ + + + K + K KEP
Sbjct: 194 DLNTE-TPQISLPP----VILKKKRSIGASLNPFSVHTCKAVPSGKTNSLVSWKEPPLTP 248
Query: 242 -PLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQ--DVLPEQAKV 298
PLK + ++V N E+S +DG D+D + + DV P AK
Sbjct: 249 VPLKRAEFAGEAVPACTQN-KEESGAVDFEDG--------DFDEPMEAEEADVEPVAAKT 299
Query: 299 ELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSE 358
Q E + E + + +++ S P + C W+ I E +S
Sbjct: 300 WDQ----EKEPAEGVICEAGPQKGTTSCLGSFLP--------DVSC--WD-IDQEDDSSF 344
Query: 359 PQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCC 418
+ D LPL + ++VF+ ++LDA+ED Y QPG V+LFGKV+++ +H SCC
Sbjct: 345 SAWEVKVDSDHLPLVKGADEEQVFQFYWLDAYEDQYNQPGVVFLFGKVWIESAKTHVSCC 404
Query: 419 VIVQNIDRKIYLLPRSEHL------KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEK 471
V+V+NI+R +Y LPR + +T PV++ VY EFD+ IA +YKI+ FKS+ +EK
Sbjct: 405 VMVKNIERTLYFLPRETKIDLNTGKETGTPVTMKDVYDEFDEKIAAKYKIMKFKSKIVEK 464
Query: 472 KYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPS 531
YAF +P +P+ SEYLEVRYSA+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP
Sbjct: 465 NYAFEIPDIPEKSEYLEVRYSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPC 524
Query: 532 WLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGN----VLS---RTLMGGRSERNEF 584
WLE + SWCK E + + + + G V+S +T+ ++ +NE
Sbjct: 525 WLEVKNPQLSNQPFSWCKVEAMALKPDLVNVMMDVGPPPLVVMSFSMKTMQNAKTHQNEI 584
Query: 585 LLLHAFHEKSYVL 597
+ + A S+ L
Sbjct: 585 IAVAALVHYSFAL 597
>gi|259790|gb|AAB24152.1| DNA polymerase-primase 180 kda subunit [Drosophila melanogaster]
Length = 1490
Score = 624 bits (1609), Expect = e-175, Method: Compositional matrix adjust.
Identities = 336/691 (48%), Positives = 459/691 (66%), Gaps = 33/691 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGE 614
++ITN+CGN ++RTL GGRSERNEFLLLHAFHEK+Y++PDK + G + +G
Sbjct: 790 LQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDKKPVSKRSGAGDTDATLSGA 849
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ +KKAAY+GGLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT+ + D
Sbjct: 850 DATMQTKKKAAYAGGLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPVDADE 909
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
T LP+ + + GILP ++K+LVESR++VK LM P+LS +L MQY IRQ ALKLT
Sbjct: 910 LPT-----LPDSKTEPGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLT 964
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF +SRFFAQ LAALVT KGREIL NT+ LV+ +NY+V+YGDTDSLMI+ N+
Sbjct: 965 ANSMYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQKMNYDVVYGDTDSLMINTNI 1024
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
DYD V+KIG+ IK NKLYKQ ELDIDGV+ +LLLKKKKYAA+ +SK S G + Q
Sbjct: 1025 TDYDQVYKIGHNIKQSVNKLYKQEELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQ 1084
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+T + G
Sbjct: 1085 EHKGLDIVRRDWSQLAVMVGKAVLDEVLSEK-----PLEEKLDAVHAQLEKIKTQIAEGV 1139
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
VPL L ITKQLT+ P+EY + +LPHVQVALR+N ++ K+GD + Y+IC DGT+
Sbjct: 1140 VPLPLFVITKQLTRTPQEYANSASLPHVQVALRMNRERNRLYKKGDMVDYVICLDGTTNL 1199
Query: 975 ATQRAYNIEELKN--NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
A QRAY+++ELK + KL++D N L QIHPVVTR++E +EGTDA RIAECLG+D +
Sbjct: 1200 AMQRAYHLDELKTSEDKKLQLDTNLLLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPTK 1259
Query: 1033 YRSQI----KESIQQSE-ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
+R +E+ +QSE E++L Y+ C+ F F C+ +CK + + R
Sbjct: 1260 FRQNAQRTQRENTEQSEGESLLKTTLQ---LYRLCEPFRFQCV--TCKTEQLMASAYRPG 1314
Query: 1088 -THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
++ + VL +C + K ++ L M +Y+ ++Y+ WL C+ P C+ TR
Sbjct: 1315 PSNSHIAVLQQCAKSDAKRHRFSTWQRCAISLQLSMRQYVQRFYKNWLVCDHPDCNFNTR 1374
Query: 1147 RCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE 1204
L K+ LC C L R YTE LY QL + ++ D+ K T P++ E
Sbjct: 1375 THSLRKKSHRPLCQKCRSGTLLRQYTERDLYNQLCYLRFMFDLGKQ-TLQQKPTLT--PE 1431
Query: 1205 TYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
Y + + V++ L+SS+Y I+ L KLF+
Sbjct: 1432 LEQAYQLLYETVDQQLQSSSYVIISLSKLFA 1462
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 176/582 (30%), Positives = 278/582 (47%), Gaps = 105/582 (18%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RAKRQ++DK +FAA ++L+ LKG K K E ++VY+ V E+EY +R ++ DDW
Sbjct: 9 RAKRQRVDKNGRFAAMERLRQLKGTKNKCKVE-DQVDDVYDVVDEREYAKRAQEKYGDDW 67
Query: 106 IDDDGGDGYVEDGREIFDD---------DIEDVPQKK--EKHDKRKKNKNIQNPNAKGDI 154
I++DG GY ED R+ F+D D +D+ +KK + K++ +N + K I
Sbjct: 68 IEEDGT-GYAEDLRDFFEDEDEYSDGEEDRKDLKKKKGVAPNSKKRPRENEKPVTGKASI 126
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLL-SEVNTTIAPTLKLNTKT---NEIVIPKEEP 210
+ L +N KKK + + +DD + + E+ A T + K +I + +
Sbjct: 127 KNLFSNAVPKKKMDVKTSVKDDDDILADILGEIKEEPAATSEKAEKVIAPAKISVTSRKF 186
Query: 211 PAPTAKEYLANFSKPIKVEK----------------KIEKP----------------IKK 238
A AKEY+ +F IKV++ +I KP IKK
Sbjct: 187 DAAAAKEYMNSFLNNIKVQEQERKKAEASSDNEMLERILKPKAAVPNTKVAFFSSPTIKK 246
Query: 239 EPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDN------SQQTQDVL 292
EP P E A+++ E+P D + +DD +N +QQT+ V
Sbjct: 247 EPMP--------------EKTPAKKATEDPFSDNEMDFSCLDDDENQFDVEKTQQTEKV- 291
Query: 293 PEQAKVELQIEAIESQSIEEKVDVTNV-ESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQ 351
++++ EK + V E + E + SP E WE+I
Sbjct: 292 ------------SQTKTAAEKTSQSKVAEKSAPKKETTGSPKESESEDISRLLNNWESIC 339
Query: 352 TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKEN 411
E V + D ++ ++D + R ++ +A+ED K PG V+LFG+
Sbjct: 340 QMDDDFEKSVLTTEQDSTI--SSDQQ----LRFWYWEAYEDPVKMPGEVFLFGRT----- 388
Query: 412 NSHSSCCVIVQNIDRKIYLLPRSEHLK------TKEPVSIAQVYSEFD-QIATQYKILDF 464
S C+ VQNI+R +YLLPR L TK+ V++A +Y EFD ++A Q K+ F
Sbjct: 389 ADGKSVCLRVQNINRVLYLLPRQFLLDPISKEPTKQKVTVADIYKEFDSEVANQLKLEFF 448
Query: 465 KSRKIEKKYAFNLPG--VPDLSEYLEVRYSAK--CPALPSDLSGDTFSHVFGTKSSFLEN 520
+SRK+ K +A + G VP +YLEV Y K P L +D ++ +H+FG ++ LE
Sbjct: 449 RSRKVTKSFAHHAIGIEVPQSCDYLEVHYDGKKPLPNLSADKKYNSIAHIFGATTNALER 508
Query: 521 LLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
LL+RKIKGP WL+ + P+ +SWC EV + + + +
Sbjct: 509 FLLDRKIKGPCWLQVTGFKVSPTPMSWCNTEVTLTEPKNVEL 550
>gi|347966812|ref|XP_321134.5| AGAP001929-PA [Anopheles gambiae str. PEST]
gi|333469889|gb|EAA00974.5| AGAP001929-PA [Anopheles gambiae str. PEST]
Length = 1589
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 348/710 (49%), Positives = 472/710 (66%), Gaps = 49/710 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--------QYGKNKKEGEE 611
++IT + GN+++RTL GGR+ERNEFLLLHAFHEK Y+LPDK K GEE
Sbjct: 823 LQITQIAGNLMNRTLHGGRAERNEFLLLHAFHEKDYILPDKVGFQGPGGGQKNGKGGGEE 882
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-PVRM 670
A K K + KAAY+GGLVL+P KGFYDKF++LMDFNSLYPSIIQEYNICFTT+ P +
Sbjct: 883 AAAAEKRKPKNKAAYAGGLVLDPIKGFYDKFVLLMDFNSLYPSIIQEYNICFTTVLPPAV 942
Query: 671 LQ-------DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+ D D T L E + GILP +I+KLVESRR VK LMK +LS +L+MQ
Sbjct: 943 GEGQEGPDPDGD-TALLEPTILATNEIGILPRQIRKLVESRRAVKQLMKASDLSPELVMQ 1001
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYG 783
Y+IRQ ALKLTANS+YGCLG+ SRF+AQ LA+L+T KGREIL+NTKS+VE +NY+VIYG
Sbjct: 1002 YNIRQMALKLTANSLYGCLGYTRSRFYAQHLASLITLKGREILMNTKSIVERMNYQVIYG 1061
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
DTDS+M+S N+ DY+ V++IG IK NK Y+ LELD+DG+YKY+LLLKKKKYAA+SIS
Sbjct: 1062 DTDSIMVSTNITDYEQVYRIGASIKQHVNKAYRCLELDVDGIYKYLLLLKKKKYAAVSIS 1121
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
K ++G +C+QE+KG+D+VRRDWS++A AG +++QIL +D +D+R++NIH +
Sbjct: 1122 KKADGAFVCTQELKGLDIVRRDWSRIAVLAGNMILAQIL-----SDAPMDERIENIHLRL 1176
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTIS 963
+K++ DL G + L LLEITKQLT++ EY D LPHVQVA R+N ++ K+GD ++
Sbjct: 1177 EKLKDDLVAGTLSLQLLEITKQLTRSLNEYGDAGQLPHVQVAQRMNKQRNRNYKRGDMVN 1236
Query: 964 YIICEDGTSEAATQRAYNIEELK---NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
YIIC+DGTS AA +RAY+I+E++ N LK+DV YYL+QQIHPVV R+ EP++GTDA
Sbjct: 1237 YIICQDGTSAAAMKRAYHIDEIRDPANADLLKVDVEYYLAQQIHPVVFRICEPLDGTDAC 1296
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV------KYQFCDKFEFTCMNPSC 1074
R+A CLGLD YR+ + E + + E + +Y+ C +FEFTC+ +C
Sbjct: 1297 RLALCLGLDPKKYRTMVSGGGGGGEPDGGQYQDGESLIKTAAERYRLCHRFEFTCV--AC 1354
Query: 1075 KQVNTVEAPTRLSTHGV-VFVLDECINPE----CKVPPYTYLPHLINKLSQDMNKYIVKY 1129
K N V + R S G V + C N E C P YLP ++N+L+ + I ++
Sbjct: 1355 KGKNPVASGFRPSAGGRHRSVFERCANEEGGTVCTAAPVQYLPAIVNELTLAVRADIRRF 1414
Query: 1130 YEGWLKCEDPGCSDLTRRCP--LGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDI 1187
Y+ W+ C++P C+ TR C C K L Y+E LY QL ++ Y+ D+
Sbjct: 1415 YQRWMVCDNPICNANTRMYSHVAAKNNPYCLLCRKGLLVLQYSETDLYNQLCYYLYMFDL 1474
Query: 1188 ---TKALTKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ LTK+ P I+ Y ++K+ VERF + S Y +V+L +
Sbjct: 1475 EQYSPKLTKALPPDIR------NMYNRLKETVERFQQRSKYGVVNLSNFY 1518
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 5/178 (2%)
Query: 380 KVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKT 439
+ + +F DA+ D K G +YLFG++ S CV VQN+DR +YLL R H +T
Sbjct: 401 ETMKFWFWDAWNDPNKCQGELYLFGRISAGNGRDFQSICVHVQNVDRCMYLLARETHTET 460
Query: 440 KEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPG----VPDLSEYLEVRYSAK 494
PVS+ VY+EF + I+T+ I ++++ + K +A+ VP +EYLEVRYSAK
Sbjct: 461 GAPVSMLDVYNEFCNDISTKLNITKYRTKVVTKSFAYTSATSSLQVPVTAEYLEVRYSAK 520
Query: 495 CPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
A P D T +H+FG ++ +E LLERK+KGP W+E ++ SWCK EV
Sbjct: 521 LAAPPPDKRYRTIAHIFGANTNVVEQFLLERKVKGPCWMELRNTTPRETKSSWCKREV 578
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 114/217 (52%), Gaps = 34/217 (15%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
R+KR++IDK +FAA ++LK +K G K+KYE ENVY+EV EKEY + V +R DDW
Sbjct: 10 RSKRRRIDKHGRFAALERLKKVKEVGTKNKYEVDEIENVYDEVDEKEYAKIVNERMHDDW 69
Query: 106 IDDDGGDGYVEDGREIFDDDIED--------VPQKKEKHDKRKKNKNIQNPNAKGDIQKL 157
++DD G GYVE+GREIFD+D D +K K KR ++ + + +K
Sbjct: 70 VEDDDGLGYVENGREIFDEDELDPLTSGSRSASKKGTKGKKRVRDDAGHSQSGPVTGRKS 129
Query: 158 LANMPVKKKKKEEVQLNNDDVLADLLSEVNT-----------------------TIAPTL 194
L N +++ + ++ +DD LAD+L E+ + I P L
Sbjct: 130 LKNY-FNREQAPKTKVEDDDALADILGEIKSENGAAGEADGSSENGPGSSSGRKEIRP-L 187
Query: 195 KLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKK 231
+ TKT V PKE K Y+AN SK +K +K
Sbjct: 188 QRATKTAP-VKPKELTAEEEMKRYMANLSKNLKRSEK 223
>gi|348512198|ref|XP_003443630.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Oreochromis
niloticus]
Length = 1430
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 348/694 (50%), Positives = 470/694 (67%), Gaps = 28/694 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK----EGEETGEA 615
++ITN+ GNV+SRTLMGGRSERNEFLLLHAFHEK Y++PDK K + EGE+ +A
Sbjct: 739 LQITNIAGNVMSRTLMGGRSERNEFLLLHAFHEKDYIVPDKPSFKKAQLETAEGEDDVDA 798
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 675
KGK +KKAAY+GGLVL+PK GFYDKF++L+DFNSLYPSIIQE+NICFTT+ R Q+S
Sbjct: 799 GKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQ-REAQNSQ 857
Query: 676 ------ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQK 729
+P+ ++ GILP EI+KLVE R+QVK LMKQ +++ DL +QYDIRQK
Sbjct: 858 KKKEEDEPEEIPEIPDPNLEMGILPKEIRKLVERRKQVKGLMKQQDINPDLYLQYDIRQK 917
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLM 789
ALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS+M
Sbjct: 918 ALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIM 977
Query: 790 ISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGK 849
I+ N D VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + G+
Sbjct: 978 INTNSKCLDEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPNGEGR 1037
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
QE+KG+D+VRRDW LA E G +VI QIL +QS D ++NI +H+ ++
Sbjct: 1038 FSVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSR-----DVIVENIQKHLVELGEK 1092
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
+ +G +PL EI K LTK P++Y D+K+LPHV VAL +N+ +++K GDTISY+IC+D
Sbjct: 1093 VASGDIPLNQYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTISYLICKD 1152
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
G++ A+QRAY +E+L+ L +D YYL+QQIHPVV+R+ +PIEG D V +A LGLD
Sbjct: 1153 GSNLPASQRAYALEQLQKQENLTLDTQYYLAQQIHPVVSRICDPIEGIDGVLVASWLGLD 1212
Query: 1030 TSLYRSQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
S +R+Q + ++ + +LGV +E +Y+ C++F FTC P C N + +
Sbjct: 1213 PSQFRAQQQFQREEEADGLLGVPVQLTDEERYKDCERFTFTC--PQCGTDNIYDGVFEGA 1270
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
V L C + C P Y+ ++ NKL D+ ++I +YY GWL CED C + TRR
Sbjct: 1271 GAKVEPSLMRCCHIPCGGSPADYIVNISNKLVLDIRRHIKRYYAGWLMCEDQACQNRTRR 1330
Query: 1148 CPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-----IK 1200
P+ +C C + L Y+E LY QL F+ +I D A+TK P IK
Sbjct: 1331 LPIAFSRHGPICPACSRATLRPEYSEKALYNQLCFYRFIFDWEYAVTKVLNPEERKLVIK 1390
Query: 1201 FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ E + Y K+K+ ++ L SS Y+ ++L KLF
Sbjct: 1391 MNQEKDV-YRKLKEVPDKALASSGYSEINLAKLF 1423
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 202/561 (36%), Positives = 291/561 (51%), Gaps = 67/561 (11%)
Query: 71 GVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVP 130
G K KYE +VYEEV E EY++ V +RQEDDWI DD G GYVEDGREIFDDD++D
Sbjct: 2 GEKIKYEVKEFSSVYEEVDEDEYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDDLDDDV 61
Query: 131 QKKEKHDKRK---------KNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLAD 181
+ ++ K + PN+ I+ L N VK+ +++V L+ DD+L D
Sbjct: 62 VEDKRGKGGAKGGDSKKNVKKSVVAKPNS---IKSLFMNSNVKRPAEKDVDLSKDDLLGD 118
Query: 182 LLSEVNT------TIAPTLKLNTK------TNEIVI----PKEEPPAPTAKEYLANFSKP 225
+L ++++ T P + L K N I PK+ P A K + + P
Sbjct: 119 ILQDLHSEKPALLTPPPVVTLKKKKSVGSPMNPFSIKPQLPKDSPSAAGLKAKVIR-TPP 177
Query: 226 IKVEKK--IEKPIKKEPSPL-KDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDW 282
+ + + P SP+ K ++K VE E EE V+D M D+
Sbjct: 178 SQSAPRSSVRPPSSTSASPMAKQKVK-------VEKLNEEDKNEEEVNDA----MAFDEM 226
Query: 283 DNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEH 342
D + + L E+A V E K +V V +V + P + +
Sbjct: 227 DFDEPMEVGLEEEAPVV-------KDDAESKPEVAAVTAVKVEAKAEPQDPVLMSSRIGS 279
Query: 343 KCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYL 402
+ E + +E QV S LPL + ++VFR ++LDAFED Y QPG VYL
Sbjct: 280 SWGQEEEGGANDAPAEVQVDS----SQLPLVEGPDGEQVFRFYWLDAFEDPYNQPGVVYL 335
Query: 403 FGKVFVKENNSHSSCCVIVQNIDRKIYLLPR--SEHLKTKE----PVSIAQVYSEFDQIA 456
FGKV+++ SH SCCV V+NI+R +YLLPR + +T E PV + VY EF++++
Sbjct: 336 FGKVWIESAKSHVSCCVSVKNIERTMYLLPREYKTNPRTGEVSNTPVGMMDVYQEFNELS 395
Query: 457 TQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSS 516
++KI+ FKS+K+EK YAF +P VP EYLEVRYSA+ P+LPSDL G TFSH+FGT +S
Sbjct: 396 EKFKIMKFKSKKVEKNYAFEIPDVPTQCEYLEVRYSAEFPSLPSDLKGATFSHIFGTNTS 455
Query: 517 FLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITN-------VCGNV 569
LE+ LL RKIKGP WL+ + +SWCK E + + I + ++
Sbjct: 456 RLEHFLLSRKIKGPCWLDIKSPQLMNQPVSWCKVEALSLRSDLISVVKDLPPPPLTVMSI 515
Query: 570 LSRTLMGGRSERNEFLLLHAF 590
+T+ ++ +NE + L A
Sbjct: 516 SLKTVQNPKTHQNEIVSLAAL 536
>gi|410908891|ref|XP_003967924.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Takifugu
rubripes]
Length = 1467
Score = 620 bits (1600), Expect = e-174, Method: Compositional matrix adjust.
Identities = 341/697 (48%), Positives = 471/697 (67%), Gaps = 36/697 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK----EGEETGEA 615
++ITN+ GNV+SRTLMGGRSERNEFLLLHAFHEK+Y++PDK K + EGE+ G
Sbjct: 778 LQITNIAGNVMSRTLMGGRSERNEFLLLHAFHEKNYIVPDKPSFKKTQLEMAEGEDEGAV 837
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ--- 672
KGK +KKAAY+GGLVL+PK GFYDKF++L+DFNSLYPSIIQE+NICFTT+ L
Sbjct: 838 GKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREALNLQR 897
Query: 673 --DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
+ + +P+ ++ GILP EI+KLVE R+QVK LMKQ +++ D +QYDIRQKA
Sbjct: 898 KNEEEDQEEIPEIPDSSLEMGILPKEIRKLVERRKQVKQLMKQQDINPDAYLQYDIRQKA 957
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N +VIYGDTDS+MI
Sbjct: 958 LKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLDVIYGDTDSIMI 1017
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ N + VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + +G+
Sbjct: 1018 NTNSKSLEEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVENHGDGRY 1077
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
QE+KG+D+VRRDW LA E G +VI QIL +QS D ++NI +H+ ++ +
Sbjct: 1078 TLKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSR-----DVIVENIQKHLVEMGEKV 1132
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
G +PL EI K L K P++Y D+K+LPHV VAL +N+ +++K GDT+SYIIC+DG
Sbjct: 1133 AAGDIPLNQYEIHKALAKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTVSYIICKDG 1192
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
++ AA+QRAY E+L+ L +D YYL+QQ+HPVV+R+ +PIEG D V IA LGLD
Sbjct: 1193 STLAASQRAYTQEQLQKQEGLSLDTQYYLAQQVHPVVSRICDPIEGIDGVLIATWLGLDP 1252
Query: 1031 SLYRSQIKESIQQSEEN-ILGVG--EAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
S +R+Q + Q+ +EN +LGV +E +Y+ C+ F FTC P C N ++ +
Sbjct: 1253 SQFRAQ--QQYQREDENHLLGVSLQLTDEERYKDCENFTFTC--PQCGTDNICDSVFEGT 1308
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
+ L C + C+ P Y ++ NKL D+ ++I KYY GWL CED C + TRR
Sbjct: 1309 GLNLEPSLMRCCHIPCESRPIDYSVNICNKLLLDIRRHIKKYYAGWLVCEDQACQNRTRR 1368
Query: 1148 CPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSET 1205
P+ + +C C + L Y+E LY QL F+ +I D A +K I+ D ++
Sbjct: 1369 LPIAFSRQGPICPACSRATLRPEYSEKALYNQLCFYRFIFDWEAAFSK-----IQADEKS 1423
Query: 1206 YMGYC--------KMKQHVERFLESSAYNIVDLKKLF 1234
++ C ++K+ ++ L +S+Y+ ++L KLF
Sbjct: 1424 HVKNCNKEKEVYRRLKEVPDKALAASSYSDINLAKLF 1460
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 199/534 (37%), Positives = 288/534 (53%), Gaps = 57/534 (10%)
Query: 45 GRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDD 104
R++R+K K+ + +A +LK K K KY+ +VYEEV E++Y++ V RQEDD
Sbjct: 28 SRSRREKRAKSGRMSALDQLKKAKKG-EKIKYKVEELTSVYEEVDEEQYSKLVRDRQEDD 86
Query: 105 WIDDDGGDGYVEDGREIFDDDIE-DVPQKKEKHDKR----KKNKN---IQNPNAKGDIQK 156
WI DD G GYVEDGREIFDDD+E D+ + K + + KKN + PN I+
Sbjct: 87 WIVDDDGIGYVEDGREIFDDDLEEDIVENKGRAGAKGADAKKNMKKCIVAKPNT---IKS 143
Query: 157 LLANMPVKKKKKEEVQLNND----DVLADLLSEVNTTIAP----TLKLNTKTNEIVIPKE 208
L N VK+ +++V L+ D D+L DL SE T + P TLK + P
Sbjct: 144 LFMNSNVKRPAEKDVDLSKDELLGDILQDLHSEKKTLLTPPPVVTLKKKKSHGSPMNPFS 203
Query: 209 EPPAPTAKEYLANFSKPIKV--EKKIEKPIKKEPS--PLKDEIKSNDSVMEVEMNVAEQS 264
P +KE + + SK IK +P + PS P + E+E V+
Sbjct: 204 IKPQ-MSKESMGSKSKVIKPPPANSTARPSIRHPSSIPAPPTERHKTKEEELETEVSHTL 262
Query: 265 KEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSS 324
+ VD ++ + V+ ++AK + EA + +E K++ + SS
Sbjct: 263 DFDEVD------FDELMEVELEEEKPVVKDEAKS--KGEAKVAPKVEPKMEPHDPILFSS 314
Query: 325 AVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRM 384
E S WE + + +++ P V + LPL + + ++VFR
Sbjct: 315 KTESS-----------------WEQEEEDRASAVP-VDIQVDTSQLPLVEEPDGEQVFRF 356
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE--- 441
++LDAFE+ Y PG VYLFGKV+++ SH SCCV V+NI+R +YLLPR + K
Sbjct: 357 YWLDAFEEPYSHPGVVYLFGKVWIESAKSHVSCCVTVRNIERTMYLLPREYRVNPKTGEV 416
Query: 442 ---PVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPAL 498
PV + VY EF++++ ++KI+ +KS+K+EK YAF +P V EYLEVRYSA+ PAL
Sbjct: 417 SDTPVGMMDVYQEFNELSEKFKIMKYKSKKVEKNYAFEIPDVSSHGEYLEVRYSAEFPAL 476
Query: 499 PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
PSDL TFSH+FGT +SFLE+LLL RKIKGP WL+ ++ +SWCK E
Sbjct: 477 PSDLKASTFSHIFGTNTSFLEHLLLSRKIKGPCWLDVTTPQRMSQPVSWCKVEA 530
>gi|328782070|ref|XP_001121438.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Apis
mellifera]
Length = 1370
Score = 620 bits (1600), Expect = e-174, Method: Compositional matrix adjust.
Identities = 324/685 (47%), Positives = 464/685 (67%), Gaps = 28/685 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT++ GNV+SRTL GR+ERNE+LLLHAFH K+Y+ PDK+ K G+ N+G
Sbjct: 689 LQITSIAGNVISRTLTAGRAERNEYLLLHAFHLKNYITPDKRIMKK-------GKDNEGV 741
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
RKKAAY+GGLVLEPKKGFYDK I+LMDFNSLYPSIIQEYN+CFTT+P D ++
Sbjct: 742 TRKKAAYTGGLVLEPKKGFYDKLILLMDFNSLYPSIIQEYNLCFTTVPGAAYADYGNLSI 801
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
PE +++G++P+EI+KLVESR +VK LMK +S +L MQY+IRQ ALKLTANSMY
Sbjct: 802 ----PESNLESGVIPTEIRKLVESRGEVKKLMKT-TISPELKMQYNIRQLALKLTANSMY 856
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG + RF+A+ LAA+VTAKGREIL +TKSLVE LNYEVIYGDTDS+MI+ N+ DY+
Sbjct: 857 GCLGATHCRFYAKGLAAMVTAKGREILQHTKSLVEKLNYEVIYGDTDSIMINTNLLDYEE 916
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
VF +G +IK E NKLYK++ELDIDGV++Y+LLL+KKKYAA+ ++KL NG++ +QE KG+
Sbjct: 917 VFSVGKKIKQEVNKLYKRVELDIDGVFRYLLLLQKKKYAAVIMTKLPNGQIELTQEHKGL 976
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDW QLA + GK ++ +L Q +DR++ I + + ++ + L+
Sbjct: 977 DIVRRDWCQLACDTGKKILDHLLSNQ-----PCEDRIEQIFMILHDVAQNVRENQISLSS 1031
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
L ITKQL+K P EY D K HVQVALRLN + K GDT+ YIIC+DGT ++AT+RA
Sbjct: 1032 LVITKQLSKNPNEYPDTKQ-AHVQVALRLNKEGGRMWKTGDTVPYIICDDGTEKSATERA 1090
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+I+E K N LKIDVNYYL QI P+V R+ +PIEG D V +A+CLG+D ++Y+S+
Sbjct: 1091 YHIDEYKKNDFLKIDVNYYLLNQIFPIVLRICDPIEGFDDVLLAKCLGVD-NIYKSK--- 1146
Query: 1040 SIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECI 1099
+ E + +E K+++C +F C + C+ ++ ++ G L C
Sbjct: 1147 --RMIHEEYSDIPLTDEDKFKYCLPLKFNCKDEKCQSEIILKNIIIETSTGNQLSLASCS 1204
Query: 1100 NPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL--C 1157
NP+CK+PP+TY+ + N ++ + K + +YYEGWL+CE+P C T+ PLG + C
Sbjct: 1205 NPDCKIPPWTYVHIIQNAMTLAVRKAVSEYYEGWLECENPICGKQTQILPLGFDSTYPTC 1264
Query: 1158 TTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQHVE 1217
K + +T+ +LY Q+ F+ ++ +++++ K+ ++ Y +K+ +E
Sbjct: 1265 XXXXKINYYLKFTDTKLYNQMYFYFHLFNVSQSKYKNLLS--QYPQGMREAYDSLKETME 1322
Query: 1218 RFLESSAYNIVDLKKLFSCEEKQPK 1242
+ L +A+++V L +F ++Q K
Sbjct: 1323 KMLRRNAFSVVCLDTIFLNIDEQSK 1347
Score = 189 bits (480), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 146/245 (59%), Gaps = 26/245 (10%)
Query: 370 LPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
LPL T+ ++VFR ++ DA+ED YKQPG VYL GKVFV + SCC+ V+NI R+IY
Sbjct: 249 LPLLTNVNKEEVFRFYWWDAYEDPYKQPGVVYLLGKVFVPSIKEYCSCCLTVKNIPRRIY 308
Query: 430 LLPRSEHLKT--------KEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
LLPR ++KT ++ ++ VY EF+Q A + I +F+S K+ K YAF G P
Sbjct: 309 LLPRV-YIKTSFKDNNEEEQLNTMEDVYKEFNQFANKLGIKEFRSSKVSKHYAFEQEGTP 367
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
+S+YLEVRY+A P +PSD SG + VFGT + LE LL+ER IKGP WLE
Sbjct: 368 AISDYLEVRYAAHYPPMPSDYSGPSIERVFGTTVNALELLLIERNIKGPCWLEIKCP--L 425
Query: 542 PSRI--SWCKYEVQCNQMEKIRITN--------VCGNVLSRTLMGGRSERNEFLLL---- 587
PS I SWCK +V C +ME I + + V + RT + + ++NE +++
Sbjct: 426 PSNIQTSWCKIKVNCMKMENISVFSEFQTLPPLVITTLNIRTSLNVKLQQNEIVMVAILI 485
Query: 588 -HAFH 591
H +H
Sbjct: 486 HHKYH 490
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 106/159 (66%), Gaps = 7/159 (4%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE 102
+ GR KRQKIDKT + +A +KLK LKG K+KYE ENVYEEV EKEYT+ V++RQ
Sbjct: 5 QSGRTKRQKIDKTGRLSALEKLKQLKGS--KNKYEIDKLENVYEEVDEKEYTKTVIERQS 62
Query: 103 DDWIDDDGGDGYVEDGREIFDDDIEDVP-QKKEKHD-KRKKNKNIQNPNAKGDIQKLLAN 160
DDWI DDG GY+EDGREIFDDD++D Q+ KH K N KG+IQ +L N
Sbjct: 63 DDWIIDDGESGYIEDGREIFDDDLDDESIQEARKHKITGPKKNKKDNIKIKGNIQNMLMN 122
Query: 161 MPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTL-KLNT 198
M KKK + +L++D++L DL+SE+ +P + KL T
Sbjct: 123 M--SSKKKYDAKLDDDNILGDLMSELKKDNSPEMSKLRT 159
>gi|322790930|gb|EFZ15596.1| hypothetical protein SINV_80520 [Solenopsis invicta]
Length = 1459
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 327/679 (48%), Positives = 442/679 (65%), Gaps = 27/679 (3%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT + GN+LSRTL+GGR+ERNE+LLLHAF+ K Y+ PDK+ E+ G A+ G
Sbjct: 771 LQITCLAGNILSRTLLGGRAERNEYLLLHAFNLKDYITPDKKV-------EKKGRADDGP 823
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
RK AAY+GGLVL+PKKGFYDK ++LMDFNSLYPSIIQEYN+CFTTIP D + ++
Sbjct: 824 RRKAAAYTGGLVLDPKKGFYDKLVLLMDFNSLYPSIIQEYNLCFTTIPGAAYADVEQLSI 883
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
PE ++ G++P+EI KLV+SR+Q+K LMK PNL+ + M Y IRQ ALKLTANSMY
Sbjct: 884 ----PESNLELGVIPTEIHKLVKSRQQIKQLMKTPNLTPEQKMDYHIRQMALKLTANSMY 939
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG + RF+A+ LAALVTAKGREIL +TK LVE L YEVIYGDTDSLMI+ N+ +YD
Sbjct: 940 GCLGATHCRFYAKGLAALVTAKGREILEDTKHLVEKLQYEVIYGDTDSLMINTNILEYDD 999
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
VF IG +I E N YK++ELDIDGV++Y+LLL+KKKYAA+++SKL NG++ QE KG+
Sbjct: 1000 VFSIGRKIMREVNNRYKKVELDIDGVFRYLLLLQKKKYAAVTMSKLPNGQIQLVQEHKGL 1059
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDW LA + GK ++ +L +QS D RL+ + + ++ + + G PL+
Sbjct: 1060 DIVRRDWCPLACDTGKKILDILLCDQSS-----DTRLEQVVQILQNVAKSVKEGTAPLSS 1114
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
ITKQL+K P+ Y D+K L HV VALRLN + K GDT+ Y+ICEDGT +AT+RA
Sbjct: 1115 FVITKQLSKNPDAYPDKKQLSHVMVALRLNKAGGRMWKAGDTLPYVICEDGTDASATERA 1174
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+I+E+KNN KLK+D+NYYL QI PVV R+ EPIEG D V +A LGL +Y+ +
Sbjct: 1175 YHIDEVKNNEKLKVDINYYLLSQIFPVVLRICEPIEGIDDVFLANNLGLQF-IYKPKAIP 1233
Query: 1040 SIQQSEENILGVGEA-EEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDEC 1098
E L + A + ++ C F C N C ++ G L C
Sbjct: 1234 C-----EATLNLPLAINDDRFNNCLPLTFKCRNERCNTEIIIKDTVTEFHSGRQLSLSMC 1288
Query: 1099 INPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL-- 1156
N +CK+PP+ Y + N + M K I KYY GWL+CE+P CS+ TRR PL +
Sbjct: 1289 PNQDCKLPPWKYANVIQNVVQLAMRKAITKYYSGWLECENPLCSNRTRRLPLDFVKKFPD 1348
Query: 1157 CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQHV 1216
C C ++RVY+ LY QL +++ I DIT+ K D Y +K+ V
Sbjct: 1349 CPVCKDASINRVYSGTDLYNQLYYYYKIFDITQPAYKQLLSQCSRD--MIAAYNNLKEAV 1406
Query: 1217 ERFLESSAYNIVDLKKLFS 1235
++ L+ + ++ V++ +FS
Sbjct: 1407 DKQLKRNKFSCVNITGIFS 1425
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 299/563 (53%), Gaps = 78/563 (13%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
GR KRQK+DKT + +A ++LK+ + G K KYE +N+Y+EV EKEY+ VLKRQ D
Sbjct: 3 SGRTKRQKVDKTGRLSALERLKEARSGG-KRKYEVEELKNIYDEVDEKEYSNTVLKRQRD 61
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK--------GDIQ 155
DWI DDG GY+EDGREIFDDD+++ + + RK+ N+ P K GDIQ
Sbjct: 62 DWIVDDGESGYIEDGREIFDDDLDE----ESIQEARKQRHNMAGPRKKRKEEDKKKGDIQ 117
Query: 156 KLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT---TIAPTLKLNTKTNEIVIPKEEPPA 212
++ NMP KK VQ+ +DD+L +LLSE++T T P KL + N+
Sbjct: 118 SMIRNMP-SKKDANVVQIKDDDILGELLSEISTDKKTNNP--KLGSSKNKF--------C 166
Query: 213 PTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDG 272
T + + V +K I ++P K +KSN+ A Q E+ D
Sbjct: 167 HTVHSSIIQIHQSSSVTEKTTDKIFEKPKE-KIVLKSNNIAQS-----ASQIIEDEDDTI 220
Query: 273 LWEQMQIDDWDNSQQTQDV--LPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELST 330
+++ Q + ++ + + E++KVE Q+ ++ ++ N++S S +E ++
Sbjct: 221 IFDPPQKESISKPAESNNCSKVQEESKVE-------DQNAKKSMESNNIQSASQIIEDAS 273
Query: 331 SPPPQV----------------------VEKKEHKCAEWEAIQTEPSTSEPQVHSRTADD 368
SP + V K K I + + + V S +
Sbjct: 274 SPMVDINECVGDLSTIDFDDGSMDFSSSVTIKSQK----NGIDLQTTVCQTSVKSMKIGN 329
Query: 369 SLPLA-------TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIV 421
++ L + ++VFR ++LDA+E+ YK PGTVYLFGK +V ++++ SCC++V
Sbjct: 330 AVDLTEIAPQLIKTKDEEEVFRFYYLDAYENPYKNPGTVYLFGKTYVSSHDTYCSCCIMV 389
Query: 422 QNIDRKIYLLPRSEHLKTKEP--VSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPG 479
I R+IYLLPR +++K E ++ VY EFD+ A++ +I++F ++++K Y+F G
Sbjct: 390 HCIPRRIYLLPR-KYIKNTESQLTTMEDVYKEFDEYASKMRIMEFNCKEVKKHYSFEKEG 448
Query: 480 VPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
P S+YLEVRY+A+ PA+ SD SG VFGT + LE LL+ERKIKGP WL+
Sbjct: 449 TPKTSDYLEVRYNARYPAIESDYSGLAIERVFGTTVNALELLLIERKIKGPCWLDIKNVS 508
Query: 540 KFPSRISWCKYEVQCNQMEKIRI 562
R +WC V + M+ I +
Sbjct: 509 PTAGRFAWCPQIVVASDMDNISL 531
>gi|307165839|gb|EFN60202.1| DNA polymerase alpha catalytic subunit [Camponotus floridanus]
Length = 1478
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 324/695 (46%), Positives = 444/695 (63%), Gaps = 29/695 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT++ GN+LSRTL+GGR+ERNE+LLLHAFH K Y+ PDK+ K ++ + G
Sbjct: 793 LQITSLAGNILSRTLLGGRAERNEYLLLHAFHLKDYITPDKKIEKKARDDD-------GP 845
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
RK AAY GGLVL+PKKGFYDK ++LMDFNSLYPSIIQEYN+CFTT+P D + ++
Sbjct: 846 RRKAAAYIGGLVLDPKKGFYDKLVLLMDFNSLYPSIIQEYNLCFTTVPGAAYADVEQLSI 905
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
PE ++ G++P+EI KLV+SR+Q+K LMK PNL+ + M Y IRQ ALKLTANSMY
Sbjct: 906 ----PESNLEAGVIPTEIHKLVKSRQQIKQLMKTPNLTPEQKMDYHIRQMALKLTANSMY 961
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG + RF+A+ LAAL+T KGR+IL +TK LVE L YEVIYGDTDSLMI+ N+ +YD
Sbjct: 962 GCLGATHCRFYAKGLAALITTKGRQILEDTKHLVEKLQYEVIYGDTDSLMINTNILEYDD 1021
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
VF IG +I E N YK++ELDIDGV++Y+LLL+KKKYAA++++KL NG+M QE KG+
Sbjct: 1022 VFSIGRKIMREVNNRYKKVELDIDGVFRYLLLLQKKKYAAVAMTKLPNGQMQLIQEHKGL 1081
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDW LA + GK V+ +L +Q+ + RL+ + + ++ + + G PL+
Sbjct: 1082 DIVRRDWCPLACDTGKKVLDILLCDQAS-----ETRLEQVVQILQNVAKGVREGTTPLSA 1136
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
ITKQL+K P+ Y D+K L HV VALRLN + K GDT+ Y+ICEDGT +AT+RA
Sbjct: 1137 FVITKQLSKNPDAYPDKKQLSHVMVALRLNKAGGRMWKAGDTLPYVICEDGTDASATERA 1196
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+I+E+KNN KLK+DVNYYL QI PV+ R+ EPIEG D V +A LGL +Y+ +I
Sbjct: 1197 YHIDEVKNNEKLKVDVNYYLLSQIFPVILRICEPIEGIDDVFLANNLGLQF-VYKPKILA 1255
Query: 1040 SIQQSEENILGVGEA-EEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTH-GVVFVLDE 1097
E L + A + ++ C F C N C + V T H G L
Sbjct: 1256 C-----EATLNLPLAINDDRFNNCLPLTFKCKNERC-NTDIVITDTITEFHSGRQLSLSM 1309
Query: 1098 CINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL- 1156
C N +CK+PP+ Y + N + M K I +YY GWL+CE+P CS+ TRR PL +
Sbjct: 1310 CPNQDCKLPPWKYANIIQNVVQLAMRKAIGRYYNGWLECENPLCSNRTRRLPLDFARKFP 1369
Query: 1157 -CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQH 1215
C C + RVY+ LY QL ++H + DI++ K D Y +++
Sbjct: 1370 DCPACKDVTMSRVYSGTDLYNQLYYYHKMFDISQPAYKHLLSQCSRD--MIAAYNTLREA 1427
Query: 1216 VERFLESSAYNIVDLKKLFSCEEKQPKLSRGVERE 1250
++R L+ + ++ V++ +FS RE
Sbjct: 1428 IDRQLKRNKFSCVNITGIFSGSSNVAMFGSAGSRE 1462
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 126/196 (64%), Gaps = 6/196 (3%)
Query: 372 LATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLL 431
L + ++VFR ++LDA+E+ YK PGTVYLFGK +V +++ + SCCV+V I R+IYLL
Sbjct: 359 LVKTKDKEEVFRFYYLDAYENPYKNPGTVYLFGKTYVSKHDVYCSCCVMVHCIPRRIYLL 418
Query: 432 PRSEHLKT---KEP--VSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY 486
PR +++KT EP +I VY EFD+ A + +I++F ++ +K Y+F G P S+Y
Sbjct: 419 PR-KYIKTSKNNEPQLTTIEDVYKEFDEYANKMRIMEFNCKETKKHYSFEKEGTPRTSDY 477
Query: 487 LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRIS 546
LE+RY+A+ PA+ +D SG VFGT + LE LL+ERKIKGP WL+ R +
Sbjct: 478 LEIRYNARYPAIDADYSGPAIERVFGTTVNALELLLIERKIKGPCWLDIKNISPTAGRFA 537
Query: 547 WCKYEVQCNQMEKIRI 562
WC V + M+ I +
Sbjct: 538 WCSQIVVTSDMDNISL 553
>gi|170060133|ref|XP_001865668.1| DNA polymerase alpha catalytic subunit [Culex quinquefasciatus]
gi|167878675|gb|EDS42058.1| DNA polymerase alpha catalytic subunit [Culex quinquefasciatus]
Length = 1495
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 343/684 (50%), Positives = 462/684 (67%), Gaps = 29/684 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT + GN+++RTL GGR+ERNEFLLLHAF+EK Y+LPDK K E A + K
Sbjct: 772 LQITQIAGNLMNRTLHGGRAERNEFLLLHAFNEKDYILPDKVQTKMGATQEAGEPAERRK 831
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
+ KAAYSGGLVL+P KGFYDKFI+LMDFNSLYPSIIQEYNICFTT+P + T L
Sbjct: 832 PKSKAAYSGGLVLDPIKGFYDKFILLMDFNSLYPSIIQEYNICFTTVPPPPPGEETPTIL 891
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+ GILP +++KLVESRR VK LMK P L + +MQY+IRQ ALKLTANS+Y
Sbjct: 892 ------QTEEMGILPRQVRKLVESRRAVKQLMKAPGLEPEQMMQYNIRQMALKLTANSLY 945
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ SRF+AQ +AAL+T KGREIL+NTKS+VE ++Y+VIYGDTDS+MI+ N+ DYD
Sbjct: 946 GCLGYTRSRFYAQHMAALITQKGREILMNTKSIVEKMDYQVIYGDTDSIMINTNIVDYDQ 1005
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
VFKIG IK N+ YK LELD+DG+YKY+LLLKKKKYAA+SI+K +N + C+QE+KG+
Sbjct: 1006 VFKIGASIKQFVNRTYKCLELDVDGIYKYLLLLKKKKYAAVSITK-ANNEFKCTQELKGL 1064
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDWS+LA AG FV+++IL +D +D+R++NIH ++K++TDL G +L
Sbjct: 1065 DIVRRDWSKLAVIAGNFVLAEIL-----SDKPMDERIENIHAKLEKLKTDLLTGATYPSL 1119
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
L+ITKQLT+A EY+D LPHV VA+R+N T ++ K+GD + YIIC+DGTS A +RA
Sbjct: 1120 LDITKQLTRALNEYSDSSQLPHVTVAMRMNKTRNRNFKRGDMVGYIICDDGTSSPAMKRA 1179
Query: 980 YNIEELK---NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
Y+I+ELK N KLK DV+YYL+QQ+ PVV R+ EP+EGTDA R+A LGLD +++
Sbjct: 1180 YHIDELKDPANKDKLKPDVDYYLAQQVFPVVFRICEPLEGTDACRLALALGLDPKKFQAL 1239
Query: 1037 IKESIQQSEENILGVGEAEE----VKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV 1092
S + N GEA + KY+ C +FEF C+ +C N V A R
Sbjct: 1240 GATS---RDGNDHAEGEAVQKTIAQKYRMCHRFEFKCV--ACGSNNPVAAGFRKDGGKQK 1294
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-RCPLG 1151
V + C N +C V P YLP + N+L+ + I ++YE W+ C++P CS TR +
Sbjct: 1295 SVFERCANEKCDVRPLHYLPAIKNQLTLAIRGDIKRFYERWMVCDNPICSVNTRLSSQVA 1354
Query: 1152 LKTRL-CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYC 1210
K C C K L + Y+E LY QL++++YI D++ +K T ++ D +
Sbjct: 1355 TKNNPNCLHCLKGLLVQQYSETDLYLQLNYYNYIFDLSHYSSKF-TRTLPLDIRE--AHD 1411
Query: 1211 KMKQHVERFLESSAYNIVDLKKLF 1234
K+++ V +FL S Y V + L+
Sbjct: 1412 KLREMVRQFLVQSKYATVRMSTLY 1435
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 120/201 (59%), Gaps = 5/201 (2%)
Query: 368 DSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRK 427
D++ + E+ + R +F DA+ D K G +Y+FGKV K+ S CV V N+DR
Sbjct: 337 DAMDTSISEESTETMRFWFWDAWTDPAKCQGEIYIFGKVATKKPGEFQSVCVHVLNVDRC 396
Query: 428 IYLLPRSEHLKTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPG----VPD 482
+ LLPR + L + EPV++ VY+EF D I+T+ K+ ++K++K+ K +A+ VP
Sbjct: 397 MQLLPREKELDSDEPVTMLSVYNEFRDDISTRLKVTNYKTKKVRKNFAYTSGMAELEVPA 456
Query: 483 LSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP 542
S+YLEVRYSAK PA D T +H+FGT ++ +E LLERK+KGP W+E +K P
Sbjct: 457 ESDYLEVRYSAKLPAPTLDRKYRTIAHIFGTNTNIVEQFLLERKVKGPCWMEIKNFKKNP 516
Query: 543 SRISWCKYEVQCNQMEKIRIT 563
+ S+CK E + I +
Sbjct: 517 APSSYCKQEFTVPDISSISVV 537
>gi|317419845|emb|CBN81881.1| DNA polymerase alpha catalytic subunit [Dicentrarchus labrax]
Length = 1425
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 341/712 (47%), Positives = 468/712 (65%), Gaps = 45/712 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK----EGEETGEA 615
++ITN+ GNV+SRTLMGGRSERNEFLLLHAFH+K+Y++PDK + + EGE+ +A
Sbjct: 715 LQITNIAGNVMSRTLMGGRSERNEFLLLHAFHDKNYIVPDKPSFRKAQLDTVEGEDM-DA 773
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRM 670
KGK +KKAAY+GGLVL+PK GFYDKF++L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 774 GKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAHSTQK 833
Query: 671 LQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
+ D +P+ +D GILP EI+KLVE R+QVK LMKQ +++ DL +QYDIRQKA
Sbjct: 834 KNEEDEAEEIPEIPDSNLDMGILPKEIRKLVERRKQVKQLMKQQDINPDLYLQYDIRQKA 893
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS+MI
Sbjct: 894 LKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIMI 953
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ N + VFK+GN++K+E NKLYK LE+DIDGV+K +LLLKKKKYAAL + G+
Sbjct: 954 NTNSRSLEEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVENHGEGRY 1013
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
QE+KG+D+VRRDW LA E G +VI QIL +Q+ D ++NI +H+ ++ +
Sbjct: 1014 SVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQNR-----DVIVENIQKHLVEVGEKV 1068
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
G +PL EI K LTK P++Y D+K+LPHV VAL +N+ ++K GDTISYIIC+DG
Sbjct: 1069 AAGDIPLNQYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGHRVKAGDTISYIICKDG 1128
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
++ AA+QRAY +E+L+ L +D+ YYL+QQ+HPVV+R+ +PIEG D+V IA LGLD
Sbjct: 1129 STLAASQRAYALEQLQKQEGLSLDIQYYLAQQVHPVVSRICDPIEGIDSVLIATWLGLDP 1188
Query: 1031 SLYRSQIKESIQQSEENILG--VGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLST 1088
S +R+Q + ++ + +LG V +E +Y+ C++F FTC P C N + +
Sbjct: 1189 SQFRAQQQYQREEEADGMLGAPVQLTDEERYKDCERFTFTC--PQCGTDNIYDCVFEGAG 1246
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRC 1148
+ L C + C P Y ++ NKL D+ ++I KYY GWL CED C + TRR
Sbjct: 1247 SKLEPSLMRCCHTPCGSRPIDYTVNISNKLLLDIRRHIKKYYSGWLVCEDQACQNRTRRL 1306
Query: 1149 PLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK---SDTPSIK--F 1201
P+ +C C + L Y+E LY QL F+ +I D A K D ++ F
Sbjct: 1307 PIAFSRHGPICPACTRATLRPEYSEKALYNQLCFYRFIFDWDYAAAKVPQGDERNVTSDF 1366
Query: 1202 DSETYMG-------------------YCKMKQHVERFLESSAYNIVDLKKLF 1234
+ T Y ++K+ ++ L +S Y+ ++L KLF
Sbjct: 1367 GNRTLQTLIIGMEGGRLKMWNKEKEVYRRLKEVPDKALATSGYSEINLAKLF 1418
Score = 271 bits (692), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 193/556 (34%), Positives = 288/556 (51%), Gaps = 68/556 (12%)
Query: 71 GVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVP 130
G K KYE +VYEEV E++Y++ V +RQEDDWI DD G GYVEDGREIFDDD++D
Sbjct: 2 GEKIKYEVEEFTSVYEEVDEQQYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDDLDDDV 61
Query: 131 QKKEKHDKRKKNKN---------IQNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLAD 181
+ K K K + + PN I+ L N VK+ +++V L+ DD+L D
Sbjct: 62 VENNKGIKGAKGADSKKNVKKSVVAKPNT---IKSLFMNSNVKRPAEKDVDLSKDDLLGD 118
Query: 182 LLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKE--YLANFSKPIKVEKKIEK----- 234
+L + L+++ ++ P PP T K+ L + P ++ ++ K
Sbjct: 119 ILQD----------LHSEKPTLLTP---PPVVTLKKKKSLGSPLNPFSIKPQMPKVSLNH 165
Query: 235 PIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPE 294
+ P+P + V E+ + DG+ D+D P
Sbjct: 166 SSARLPAP-TPALPVEKKKKAKVEAVEEEVSDALAFDGV-------DFDE--------PM 209
Query: 295 QAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEP 354
+ VE + A+++ E+++ + VS VE + P V+ + W + E
Sbjct: 210 EVGVEEEKPAMKN---EDELKAAAAQ-VSVKVEPKSEPQDPVL-LSSRIGSSW-GQEEEG 263
Query: 355 STSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSH 414
SE Q + LPL + ++VFR ++LDAFED Y QPG VYLFGKV+++ SH
Sbjct: 264 VASEAQAEIQVDSSQLPLVEGADGEQVFRFYWLDAFEDPYSQPGVVYLFGKVWIESAMSH 323
Query: 415 SSCCVIVQNIDRKIYLLPRSEHLKTKE------PVSIAQVYSEFDQIATQYKILDFKSRK 468
SCCV V+NI+R +Y LPR + TK PV + VY EF+ ++ +++I+ FKS+K
Sbjct: 324 VSCCVTVKNIERTMYFLPREYKVNTKTGEVSDTPVGLMDVYQEFNDLSEKFRIMKFKSKK 383
Query: 469 IEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIK 528
+EK YAF +P VP EYLEVRYSA+ PALP DL G TFSH+FGT +S LE+ LL RKIK
Sbjct: 384 VEKNYAFEIPDVPSQCEYLEVRYSAEFPALPLDLKGATFSHIFGTNTSSLEHFLLSRKIK 443
Query: 529 GPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSER 581
GP WL+ + +SWCK E + + + + ++ +T+ ++
Sbjct: 444 GPCWLDIKTPQLISQPVSWCKVEALALRSDLVTVVKDLSPPPITVMSISLKTIQNPKTHH 503
Query: 582 NEFLLLHAF-HEKSYV 596
NE + L A H + Y+
Sbjct: 504 NEIVSLAALVHYQFYM 519
>gi|157118267|ref|XP_001653143.1| DNA polymerase alpha catalytic subunit [Aedes aegypti]
gi|108875769|gb|EAT39994.1| AAEL008247-PA [Aedes aegypti]
Length = 1508
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 346/701 (49%), Positives = 466/701 (66%), Gaps = 30/701 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKKEGEETGEANK 617
++IT + GN+++RTL GGR+ERNE+LLLHAF EK +++PDK + G + +
Sbjct: 787 LQITQIAGNLMNRTLHGGRAERNEYLLLHAFTEKDFIVPDKAPRAGPGFTQDGPELATER 846
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-PVRMLQDSDI 676
K + KAAYSGGLVL+P KGFYDKFI+LMDFNSLYPSIIQEYNICFTT+ P + D
Sbjct: 847 RKPKSKAAYSGGLVLDPIKGFYDKFILLMDFNSLYPSIIQEYNICFTTVLPPPPSEGGDD 906
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
+ + + GILP +I+KLVESRR VK LMK L +L MQY+IRQ ALKLTAN
Sbjct: 907 SEDANPVILETDEMGILPRQIRKLVESRRAVKQLMKASGLEPELKMQYNIRQMALKLTAN 966
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
S+YGCLG+ SRF+AQ +AAL+T KGREIL+NTKS+VE +NY+VIYGDTDS+MI+ N D
Sbjct: 967 SLYGCLGYTRSRFYAQHMAALITQKGREILMNTKSIVEKMNYQVIYGDTDSIMINTNSID 1026
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
YD VFKIG IK NK YK LELD+DG+YKY+LLLKKKKYAA+SI+K+ + ++ C+QE+
Sbjct: 1027 YDEVFKIGANIKQIVNKTYKCLELDVDGIYKYLLLLKKKKYAAVSIAKVGD-EIKCTQEL 1085
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
KG+D+VRRDWS+LA AG FVIS+IL +D +DDR++NIH ++K+R DL NG
Sbjct: 1086 KGLDIVRRDWSKLAVIAGNFVISEIL-----SDKPMDDRIENIHTKLEKLRDDLLNGVTY 1140
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT 976
+LLEITKQLT++ EY+D LPHV VA+R+N ++ K+GD + YIIC+DGTS AA
Sbjct: 1141 PSLLEITKQLTRSLNEYSDAAQLPHVTVAMRMNKQRNRNFKRGDVVGYIICDDGTSAAAM 1200
Query: 977 QRAYNIEELK---NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+RAY+I+ELK N KLK DV YYLSQQ+ PVV R+ EP+EGTDA R+A CLGLD +
Sbjct: 1201 KRAYHIDELKDPANKDKLKPDVEYYLSQQVFPVVFRICEPLEGTDACRLAMCLGLDPKKF 1260
Query: 1034 RSQIKESIQQSEENILGVGEAEE----VKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTH 1089
+S + +++ +E N + GEA + KY+ C FEFTC+ CK N V + +
Sbjct: 1261 QS-LGMALKDNERNYVD-GEAVQQTITQKYRHCHWFEFTCV--VCKTKNPVASGFKPDGG 1316
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-RC 1148
V ++C N CKV P Y P ++N+L + I ++Y W+ C++P CS TR
Sbjct: 1317 RYKSVFEKCRNESCKVLPQQYRPAIVNQLIAAIRGDIKRFYRRWMVCDNPICSQNTRLYS 1376
Query: 1149 PLGLKTR-LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYM 1207
+ K C C L + Y+E LY+QL+++ Y+ D++ + + + E
Sbjct: 1377 QVAAKNNPYCLHCQMGLLVQQYSESDLYKQLNYYSYMFDLSHHDGRV---TKQLSVELRN 1433
Query: 1208 GYCKMKQHVERFLESSAYNIVDLKKLF-----SCEEKQPKL 1243
Y + VERFL S Y + L L+ + +QPK+
Sbjct: 1434 IYTALSATVERFLSRSKYANIKLSDLYLNYVMNPSSRQPKI 1474
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 283/561 (50%), Gaps = 61/561 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
R+KR++IDK +FAA +KL+++K G KHKYE +NVY+EV E EY + V +R +D+
Sbjct: 10 RSKRRRIDKHGRFAALEKLRNVKAAGGKHKYEVDEVKNVYDEVDESEYAKIVNERAREDF 69
Query: 106 IDDDG--GDGYVEDGREIFD-DDIEDVPQKKEKHDKRKKNKNIQNPN----AKGDIQKLL 158
+DDD G GYVE+GRE+FD D++ED + K + + + A G +K L
Sbjct: 70 VDDDDGCGYGYVENGREVFDEDELEDEGPSRSKKKDKGQKGKKRTREEVTPATG--RKSL 127
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNT-KTNEIVIPKEEP--PAPTA 215
N K+++ +V++ +DD LAD+L E+N+ +T K ++ + P + P P P
Sbjct: 128 KNF-FNKEREAKVKIADDDALADILGEINSEKDGGQNESTSKQSKEIRPMKMPTKPKPVD 186
Query: 216 KE-----YLANFSKPIKVEKKIE----------KPIKKEPSPLKDEIKSNDSVMEV---- 256
K+ Y+ NFSK IK +K+E + +K+ S K + K V+ V
Sbjct: 187 KDEEMRKYMENFSKNIKKSEKVEEADSDEEMLDRVMKQSSSGHKQQAKPKAPVLPVFKEP 246
Query: 257 EMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDV 316
V E S EPV ++ I + D + + + + ++ + +K +
Sbjct: 247 AKVVREISPAEPVKKDEVKREPIAEEDTG--LSNFGNDFLDDDFDLTGVQETQVTQKCPM 304
Query: 317 TNVE-SVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATD 375
+ V+ V V++ + E + W I + + P + D
Sbjct: 305 SQVKHEVKEDVKVDS----------EKLLSGWGNICVSELEEDMMTDMDASTSEGPSSAD 354
Query: 376 HENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFV-KENNSHSSCCVIVQNIDRKIYLLPR- 433
+ + R +F DA+ D K+ G +Y+FGK+ + N S C+ VQN+DR +Y+L R
Sbjct: 355 GD--ETVRFWFWDAWSDPSKRQGEIYIFGKMATGNKANEFQSVCIHVQNVDRCMYMLARE 412
Query: 434 -----SEHLKTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAF-----NLPGVPD 482
S T + VS+ V++EF + I+T K+ +++R + K +A+ NL +P
Sbjct: 413 KEYNPSSKTTTDKDVSMLDVFNEFCNDISTSLKVTKYRTRVVTKNFAYTSGMANL-QIPA 471
Query: 483 LSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP 542
SEYLEVRYSAK P ++ T SH+FGT ++ +E LLERK+KGP W+ +K
Sbjct: 472 QSEYLEVRYSAKLPPPDTERKYRTISHIFGTNTNVVEQFLLERKVKGPCWMTMKNFKKSN 531
Query: 543 SRISWCKYEVQCNQMEKIRIT 563
S S+CK E + ++ I +
Sbjct: 532 SPASYCKVEYEVPEINCISVA 552
>gi|351697785|gb|EHB00704.1| DNA polymerase alpha catalytic subunit [Heterocephalus glaber]
Length = 1342
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 329/636 (51%), Positives = 435/636 (68%), Gaps = 46/636 (7%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 733 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 792
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ +K KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 793 DTSKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVVSE 852
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R++VK LMKQ +L+ DL++QYDI
Sbjct: 853 AQKVAEDGEQEQIPE-LPDPSLEMGILPREIRKLVERRKRVKQLMKQQDLNPDLVLQYDI 911
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGRE +N EVIYGDTD
Sbjct: 912 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGRE-----------MNLEVIYGDTD 960
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 961 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 1020
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1021 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKKLIEI 1075
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
R ++ NG +P++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1076 RENVLNGSIPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQVGRKVKAGDTVSYVI 1135
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E L+ L ID YYL+QQIHPVV R+ EPI+G DA IA L
Sbjct: 1136 CQDGSNLTASQRAYAPELLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAALIATWL 1195
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ C+KF+ C P+C N +
Sbjct: 1196 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCEKFKCPC--PACGTENIYD 1249
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ S + L C N +CK P T++ L NKL D+ + I KYY+GWL CE+P C
Sbjct: 1250 SVFDGSGTDLEPSLYRCSNIDCKASPLTFVVQLSNKLIMDIRRCIKKYYDGWLLCEEPTC 1309
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLY 1175
+ T+ PL LC C K L E+ LY
Sbjct: 1310 RNRTQHLPLQFSRSGPLCPACMKAVLR---PEVMLY 1342
Score = 232 bits (592), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 194/593 (32%), Positives = 281/593 (47%), Gaps = 87/593 (14%)
Query: 25 STRARSACSSFCVGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENV 84
T A S SF RA+R+K K + A +KLK K G K+KYE +V
Sbjct: 12 GTSAVSDSGSFV-------ASRARREKKSKKGRQEALEKLKKAKA-GEKYKYEVEDFTSV 63
Query: 85 YEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDD-------IEDVPQKKEKHD 137
YEEV E+ Y++ V RQ+DDWI DD G GYVEDGREIFDDD + + + H+
Sbjct: 64 YEEVDEERYSKLVQARQDDDWIVDDDGTGYVEDGREIFDDDLDDDALDTSEKGKDGKTHN 123
Query: 138 KRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT----TIAPT 193
K KKN DI+ + KK + V L+ DD+L D+L ++NT P
Sbjct: 124 KDKKNVKKLAVTKPNDIKSMFIASAGKKTADKAVDLSKDDLLGDILQDLNTETPRITPPP 183
Query: 194 LKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSV 253
+ L K I + + + K I K +KEP PL + +
Sbjct: 184 VMLRKKKRSI--------GASQNPFSVHTPKVIPSGKTASPASRKEP-PLT-PVPPKHAQ 233
Query: 254 MEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDV--LPEQAKVELQIEAIESQSIE 311
E+ E ++E + + + D+D + ++V P AK Q E+ ++ ++
Sbjct: 234 FSGELVQPEYPEDEQESGAM--EFEDGDFDEPMEAEEVNTEPMAAKTWDQ-ESDPAEGMK 290
Query: 312 EKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLP 371
K D + S P V C W+ I E +S + + + LP
Sbjct: 291 HKADPRK-----GTMSCLGSFLPDV------SC--WD-IDQEDDSSFSALEVQVDSNQLP 336
Query: 372 LATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLL 431
L + ++VFR ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y L
Sbjct: 337 LVKGSDEEQVFRFYWLDAYEDQYNQPGVVFLFGKVWIESAKTHVSCCVMVKNIERMLYFL 396
Query: 432 PRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY 491
PR +EK YAF +P VP+ SEYLEVRY
Sbjct: 397 PR--------------------------------EMIVEKNYAFEIPDVPEKSEYLEVRY 424
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYE 551
SA+ P LP DL G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK+E
Sbjct: 425 SAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKFE 484
Query: 552 VQCNQMEKIRITNVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + G V+S +T+ ++ +NE + + A + L
Sbjct: 485 AMALKPDLVNVIKDVGPPPLVVMSFSMKTMQNAKNHQNEIIAIAALVHHGFAL 537
>gi|198422811|ref|XP_002123526.1| PREDICTED: similar to DNA polymerase alpha catalytic subunit, partial
[Ciona intestinalis]
Length = 1375
Score = 593 bits (1530), Expect = e-166, Method: Compositional matrix adjust.
Identities = 344/707 (48%), Positives = 458/707 (64%), Gaps = 33/707 (4%)
Query: 548 CKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK------- 600
C YE+ + ++ITN+ GNVLSRTLMGGRSERNEFLLLHAFHE+ ++ PDK
Sbjct: 677 CCYELNALPL-ALQITNIAGNVLSRTLMGGRSERNEFLLLHAFHERGFIPPDKIKRSKDN 735
Query: 601 QYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYN 660
++ + T EA + RKKAAY GGLVLEPK+GFYDKFI+L+DFNSLYPSIIQE+N
Sbjct: 736 LLVRHPGVSKPTSEAT-SRPRKKAAYEGGLVLEPKRGFYDKFILLLDFNSLYPSIIQEFN 794
Query: 661 ICFTTIPVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSS 718
ICFTT+ + D+D + +PE ++ G+LP+EI+KLV+ RRQVK LMK +S
Sbjct: 795 ICFTTLDLHPPTDADNDFESYIPDVPETGLEPGVLPTEIRKLVQRRRQVKQLMKTVTISK 854
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNY 778
+ QYDIRQKALKLTANSMYGCLGF NSRF+A+PLAALVT +GREILL+TK LVE +
Sbjct: 855 EQYTQYDIRQKALKLTANSMYGCLGFSNSRFYAKPLAALVTRQGREILLHTKELVEKMGL 914
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
EVIYGDTDS+MI+ N D D+ FK+GNQ+KSE NKLY+ LE+DIDGVYK +LLLKKKKYA
Sbjct: 915 EVIYGDTDSIMINTNSTDLDNAFKLGNQVKSEVNKLYRLLEIDIDGVYKSLLLLKKKKYA 974
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
ALS+ K +G QE+KG+D+VRRDW LA AG F +++IL +D + ++
Sbjct: 975 ALSVQKSIDGSFSTVQELKGLDIVRRDWCDLAKMAGNFAVNRIL-----SDEPREYIVEK 1029
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
IHE++++I + L EI K+LTK P Y + LPHV+VALR+N++ +K+LK
Sbjct: 1030 IHENLEEIGRKVKENMFELEKFEIRKELTKDPNLYPGKDNLPHVRVALRVNSSMTKRLKS 1089
Query: 959 GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
GD +SYI+C+DG++ ATQRAY I+E+K+ +LK+D YYL+ Q+HPVVTRL +PI+GTD
Sbjct: 1090 GDIVSYIVCKDGSNAPATQRAYTIDEVKSKDELKVDEEYYLAHQVHPVVTRLCDPIDGTD 1149
Query: 1019 AVRIAECLGLDTSLY-RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQV 1077
A IA+CLGLD S + RSQI E +++E+ ++ V EE K+ C +F F C P K+
Sbjct: 1150 AAMIAQCLGLDPSGFKRSQIDE--EENEDRLMSVQATEEEKFAGCKRFIFVC--PQTKKT 1205
Query: 1078 NTVEAPTRLSTH--GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLK 1135
T + T + + C + + + L N+L+ + I +YY GWLK
Sbjct: 1206 VTFDQGVFAETEPSWLCSLATPCGTDDMR-QVVDFFVSLQNQLTDAIRGDIDEYYLGWLK 1264
Query: 1136 CEDPGCSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK 1193
C+DP CS T P+ + +C C K L T LY QL F+ D+ AL K
Sbjct: 1265 CDDPACSHRTTTLPVVSERNGAMCNVCFKGVLKPEVTYQSLYHQLCFYKLQFDVEYALKK 1324
Query: 1194 ------SDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ +IK E Y + V+ +L S YN V L +LF
Sbjct: 1325 YKQIGYNSIAAIKV-QEYRKYYSALTDVVDFYLNESGYNEVSLPRLF 1370
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 269/519 (51%), Gaps = 58/519 (11%)
Query: 110 GGDGYVEDGREIFDDDIEDVPQKK-EKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKK 168
GD YVEDGREIFD++I Q K K + NK DI+ +L + KKK +
Sbjct: 1 AGD-YVEDGREIFDEEINAPEQNKTSKKTIKPTNKKKIKLVKSSDIKNMLLSSGAKKKVE 59
Query: 169 EEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKE----------- 217
+ + L+ND +L D+L E+NT + L +T +V+ K++ PTA E
Sbjct: 60 KNIDLSNDALLGDILQEINTQSSDVL--STPRPPVVLRKKKKFKPTAIESKWSPQTSSAP 117
Query: 218 YLANF-SKPIKVEKKIEKPIKKEPSP-LKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWE 275
+N S+P + KK++ P P L D N+ +E+ A+++K
Sbjct: 118 TTSNLISQPSSLPKKMKPRKIVAPIPALHDSPSHNEPCVEINTPPAKRTKL--------- 168
Query: 276 QMQIDDWDNSQQTQDVLP----EQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
D DN++ +P + A ++ ++ + EE DV NV+ S V
Sbjct: 169 -----DLDNAEFLNKTIPPSNDDAAFIDDDMDVSLADFEEETPDVKNVKKEQSEV----- 218
Query: 332 PPPQVVEKKEHKCAE-----WEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFF 386
V K E+ + WE ++ E S P V +LP D E KVFR ++
Sbjct: 219 ----VKPKNENFLNQLTSLGWETVK-EKSVETPIVDVNIDSTNLPTVLDKEYNKVFRFYW 273
Query: 387 LDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIA 446
L+A+ED +KQPG VYLFGKV+++ H SCC+IV+N++RKI++LPRS++ T E V+
Sbjct: 274 LEAYEDQFKQPGVVYLFGKVYIESAKGHVSCCIIVRNVERKIFVLPRSKNRVTGEDVTPE 333
Query: 447 QVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGD 505
VY EFD +AT Y+I+ +K++ +EKKY F +P ++YLE+ YSA LPSD+SGD
Sbjct: 334 DVYREFDAHVATNYRIMKYKTKVLEKKYVFGERDIPHEAQYLEITYSADHRPLPSDISGD 393
Query: 506 TFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNV 565
TF VFGT S LE LL++RK+KGP WL+ E + S +SWCK EV I +
Sbjct: 394 TFKCVFGTNQSPLEALLIDRKMKGPCWLDIHEPQIHTSNVSWCKVEVNVTSTSTIHVIET 453
Query: 566 CG----NVLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
+LS +TL + +NE + + S+++
Sbjct: 454 MDPPPLTILSLAIKTLPNISTHQNEIIGIAGLVHTSFII 492
>gi|432093281|gb|ELK25464.1| DNA polymerase alpha catalytic subunit [Myotis davidii]
Length = 1533
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/590 (52%), Positives = 420/590 (71%), Gaps = 26/590 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GN++SRTLMGGR+ERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 767 LQITNIAGNIMSRTLMGGRAERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEDIDG 826
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 827 DVNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 886
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDI
Sbjct: 887 TQKVTEDEEQEQIPE-LPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDI 945
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 946 RQKALKLTANSMYGCLGFCYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 1005
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S
Sbjct: 1006 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTS 1065
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 1066 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1120
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
D+ NG VP + EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1121 GEDVLNGSVPASQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1180
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ +A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1181 CQDGSNLSASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1240
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
GLD + +R + + E ++L G A+ E KY+ C++F+ C P+C N ++
Sbjct: 1241 GLDPTQFR--VHHYHKDEENDVLLGGPAQLSDEEKYRDCERFKCPC--PACGTENIYDSV 1296
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGW 1133
S + L C N CK P ++ L NKL D+ + I KYYEG+
Sbjct: 1297 FEGSGTDLEPSLYRCSNINCKASPMNFIVQLSNKLILDIRRCIKKYYEGF 1346
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 306/581 (52%), Gaps = 54/581 (9%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
R++R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 18 ASRSRREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTSVYEEVDEEQYSKLVQARQDD 76
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQK 156
DWI DD G GYVEDGREIFDDD+ED ++ K +N + N K +I+
Sbjct: 77 DWIVDDDGVGYVEDGREIFDDDLEDDALDSQEIGNDNKTRNKEKRNVKKSVVTKPNNIKS 136
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK 216
+ KK + + L+ DD+L D+L ++ TT P + ++IPK+ +
Sbjct: 137 MFIASAGKKTGDKAIDLSKDDLLGDILQDL-TTETPQIT----PPPVIIPKKRRSIGASL 191
Query: 217 EYLANFSKPIKVEKKIEKPIKKE-----PSPL-KDEIKSNDSVMEVEMNVAEQSKEEPVD 270
+ + + K P+ K P PL + E + + V + ++S +
Sbjct: 192 NPFSLHTPKVVPTGKTASPVSKREPLLTPIPLQRAEFAGDPAPAAVCTHDKKESGAIDFE 251
Query: 271 DGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELST 330
DG D+D + + E+ +E + +++ ++ + V + + T
Sbjct: 252 DG--------DFDEPMEAE---------EVNVEPVAAKTCDQASEPAEVVKPEADLGKGT 294
Query: 331 SPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAF 390
+P + + W+ Q + S+ Q + LPL + ++VF+ ++LDA+
Sbjct: 295 TP---CLGGFLPDVSCWDIDQEDDSSFSAQ-EVQVDSSHLPLVKGADEEQVFQFYWLDAY 350
Query: 391 EDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPVS 444
ED Y QPG V+LFGKV++K ++ SCCV+V+NI+R +Y LPR + +T PV+
Sbjct: 351 EDQYNQPGVVFLFGKVWIKSAETYVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPVT 410
Query: 445 IAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLS 503
+ VYSEFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYS++ P LP DL
Sbjct: 411 MKDVYSEFDEKIATKYKIMKFKSKIVEKNYAFEIPDVPEKSEYLEVRYSSEMPQLPQDLK 470
Query: 504 GDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRIT 563
G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK E + + + +
Sbjct: 471 GETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKVEAMALKPDLVNVI 530
Query: 564 NVCGN----VLS---RTLMGGRSERNEFLLLHAFHEKSYVL 597
G V+S +T+ ++ NE + + A S+ L
Sbjct: 531 KDVGPPPLVVMSFSMKTIQNAKTHENEVIAVAALVHHSFAL 571
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 1131 EGWLKCEDPGCSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDIT 1188
+GWL CE+P C + R PL LC C K L Y++ LY QL F+ YI D+
Sbjct: 1414 QGWLICEEPTCRNRIRHLPLQFSRNGPLCQVCMKATLRPEYSDKSLYTQLCFYRYIFDVD 1473
Query: 1189 KALTKSDTPSIK-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
AL K T K ++ Y +K E+FL S Y V+L KLF
Sbjct: 1474 CALEKLTTDHEKEKMKKQYISNDVRKDYRNLKNITEQFLSQSGYTEVNLSKLF 1526
>gi|195569123|ref|XP_002102561.1| GD19968 [Drosophila simulans]
gi|194198488|gb|EDX12064.1| GD19968 [Drosophila simulans]
Length = 847
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/645 (49%), Positives = 435/645 (67%), Gaps = 34/645 (5%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQDSD-IT 677
+KKAAY+GGLVLEP +G Y+K+++LMDFNSLYPSIIQEYNICFTT+ PV D+D +
Sbjct: 213 KKKAAYAGGLVLEPMRGLYEKYVLLMDFNSLYPSIIQEYNICFTTVQQPV----DADELP 268
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
TL P+ + + GILP ++K+LVESR++VK LM P+LS +L MQY IRQ ALKLTANS
Sbjct: 269 TL----PDSKTEPGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLTANS 324
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
MYGCLGF +SRFFAQ LAALVT KGREIL NT+ LV+ LNY+V+YGDTDSLMI+ N+ DY
Sbjct: 325 MYGCLGFAHSRFFAQHLAALVTHKGREILTNTQQLVQKLNYDVVYGDTDSLMINTNITDY 384
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
D V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK S G + QE K
Sbjct: 385 DQVYKIGHNIKQSVNKLYKQLELDIDGVFGCLLLLKKKKYAAVKLSKDSKGNLRREQEHK 444
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+T + G VPL
Sbjct: 445 GLDIVRRDWSQLAVMVGKAVLDEVLSEK-----PLEEKLDAVHAQLEKIKTQIAEGVVPL 499
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQ 977
L ITKQLT+ P+EY + +LPHVQVALR+N +++ K+GD + Y+IC DGT+ AA Q
Sbjct: 500 PLFVITKQLTRTPQEYANSASLPHVQVALRMNRERNRRYKKGDMVDYVICLDGTTNAAMQ 559
Query: 978 RAYNIEELKN--NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRS 1035
RAY+++ELK + KL++D NYYL QIHPVVTR++E +EGTDA RIAECLG+D + +R
Sbjct: 560 RAYHLDELKTSEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPTKFRQ 619
Query: 1036 QI----KESIQQSE-ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS-TH 1089
+E+ +QSE E++L + Y+ C+ F F C+ +CK + + R ++
Sbjct: 620 NAQRTQRENTEQSEGESLL---KTTLQLYRLCEPFRFQCV--TCKTEQLMASAYRPGPSN 674
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCP 1149
+ VL +C EC+ P YL + N+L M +Y+ ++Y+ WL C+ P C+ TR
Sbjct: 675 SHIAVLQQCAKSECQTAPIQYLASVRNQLQLSMRQYVQRFYKNWLVCDHPDCNFNTRTHS 734
Query: 1150 LGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYM 1207
L K+ LC C L R YTE LY QL + ++ D+ K T P++ + E
Sbjct: 735 LRKKSHRPLCQKCRSGSLLRQYTERDLYNQLCYLRFMFDLGKQ-TLQQKPTLTPELE--Q 791
Query: 1208 GYCKMKQHVERFLESSAYNIVDLKKLFSCEEKQPKLSRGVEREHV 1252
Y + + V++ L+SS+Y I+ L KLF+ Q L V + +
Sbjct: 792 AYQLLYETVDQQLQSSSYVIISLSKLFARSLAQMSLQPSVAQPQI 836
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 17/200 (8%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RAKRQ++DK +FAA ++L+ LKG K K ++VY+ V E+EY +R ++ DDW
Sbjct: 9 RAKRQRVDKNGRFAAMERLRQLKGTKNKCK-VEDQVDDVYDVVDEREYAKRAQEKYGDDW 67
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKN----------KNIQNP-NAKGDI 154
I++D G GY ED R+ F+D+ E ++++ D +KK + + P K I
Sbjct: 68 IEED-GTGYAEDLRDFFEDEDEYSDGEEDRKDSKKKKGVAPNSKKRPRETEKPVTGKASI 126
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKT---NEIVIPKEEPP 211
+ L +N V KK + + +DD+LAD+L E+ A T + K +I + +
Sbjct: 127 KNLFSN-AVPKKVDVKTSVKDDDILADILGEIKEEPAGTSEKAEKVIAPAKISVTSRKFD 185
Query: 212 APTAKEYLANFSKPIKVEKK 231
A AKEY+ +F IKV+++
Sbjct: 186 AAAAKEYMNSFLNNIKVQEQ 205
>gi|449678979|ref|XP_002158235.2| PREDICTED: DNA polymerase alpha catalytic subunit [Hydra
magnipapillata]
Length = 1531
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 328/686 (47%), Positives = 441/686 (64%), Gaps = 36/686 (5%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK--------KEGEET 612
+IT +CGNV+SRTL+GGRSERNE+LLLHAF +K+Y+LPDK YG K K+ ++T
Sbjct: 869 QITGICGNVMSRTLLGGRSERNEYLLLHAFFKKNYILPDKSYGAKKDFKLNEKDKDVKQT 928
Query: 613 GEANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML 671
G + K K RKK Y+GGLVLEPKKGFYDK+I+L+DFNSLYPSIIQEYNICFTTI
Sbjct: 929 GVSKKPQKSRKKPTYAGGLVLEPKKGFYDKYILLLDFNSLYPSIIQEYNICFTTISRETF 988
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+ + PE ++ P E+ +LVE R+QVK L+K SDL +QYDIRQKAL
Sbjct: 989 SNGAEVKIS---PEWSLELWEQP-EVTRLVERRKQVKQLLKTAPQQSDLYLQYDIRQKAL 1044
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLGF SRF+A+PLAALVT KGREIL+ TK L + L EVIYGDTDS+MI+
Sbjct: 1045 KLTANSMYGCLGFSESRFYAKPLAALVTMKGREILMKTKDLAQALGLEVIYGDTDSIMIN 1104
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
N ND + V KIG+++KSE NKLY+ LE+DIDG++K MLLLKKKKYAA+ + +GK++
Sbjct: 1105 TNSNDLNEVRKIGSKVKSEVNKLYRTLEIDIDGIFKSMLLLKKKKYAAVVVEIKDDGKLV 1164
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
E+KG+D+VRRDW LA E+G +VI++IL + D L+NIHE ++ + L
Sbjct: 1165 EHTEMKGLDIVRRDWCGLAKESGSYVINEILSSKPR-----DVILENIHEFLRDVAKKLS 1219
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
NG V + EI K LTK P+EY D+K+LPHV VALRL +++ GDTI+YIIC+D +
Sbjct: 1220 NGEVEMEKFEINKCLTKNPDEYPDKKSLPHVTVALRL-MAQGRRVAVGDTITYIICDDNS 1278
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
ATQRAY+ EE NS LKID +YYLS Q+HPVV+RL +PIEGTD+ IAECLGLD +
Sbjct: 1279 KLPATQRAYHPEECLKNSNLKIDYHYYLSNQVHPVVSRLCDPIEGTDSSFIAECLGLDPT 1338
Query: 1032 LYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNT-VEAPTRLSTHG 1090
Y+S S+QQ E+ +L V +E +++ +KF C SC VE
Sbjct: 1339 GYKSS---SVQQDEQGLLTVLMTDEERFKDIEKFFVRCNIESCSLFKQEVEFKGSFDNKV 1395
Query: 1091 VVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPL 1150
FV C P + L N L + +I +YY W+ C+D C ++R +
Sbjct: 1396 DPFVCSSCNQP-------YHRNKLHNCLKLFIRNFINRYYSCWMSCDDRSCGYVSRHISV 1448
Query: 1151 G--LKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMG 1208
+ ++C C K +H Y++ LY QL + + D+ K ++ I+ ++ +
Sbjct: 1449 KSFMHAQICNQCGKRNIHVDYSDTMLYNQLIYLSRLFDVNKT-SEVTIKRIRKQNDLWQ- 1506
Query: 1209 YCKMKQHVERFLESSAYNIVDLKKLF 1234
+ VE+ L+ +AY+ V++ LF
Sbjct: 1507 --TLYHEVEKTLKLNAYSTVNIGDLF 1530
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 272/546 (49%), Gaps = 55/546 (10%)
Query: 28 ARSACSSFCVGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEE 87
R S C K + K+Q + FA + K + + +E+VYE
Sbjct: 106 CRHTVCSACFAKAKKNCVKCKQQDYECIKSFANCVRSNVEKIWDLSLAKKVGKEEDVYEL 165
Query: 88 VSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQN 147
V E +Y + V RQE++WI DD G GYV+DGREIFDDD ++P +K+K ++ + +
Sbjct: 166 VDEDKYAQLVQDRQEEEWIVDDDGGGYVDDGREIFDDDPNEIPIEKKKKTDKESKGSKSD 225
Query: 148 PNAKGDIQKLL--ANMPVKKKKKEEVQLNNDDVLADLLSEVN--TTIAPTLKLNTKTNEI 203
+ I L AN K+KK+ V + D VL D+L+ + TT + + N + +
Sbjct: 226 VKS-SKITNLFKSANCITKRKKETNVTVEGDSVLEDILNSITSATTTSGSKYHNRSSLQN 284
Query: 204 VIPKEEPPAPTAKEYLANFSK---PIKVEKKIEKPIKKEPSPLKD--------EIKSNDS 252
K ++ F+ P EKKI I K+ + ++D I S S
Sbjct: 285 KTQKHSHSTRNIEKTQKQFTSQPSPHVEEKKI---ILKKTTHVRDFTHIVKKENIDSGAS 341
Query: 253 VMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEE 312
+ ++N Q+K+ D QID SQ T+ + + IE ++ QS+ E
Sbjct: 342 DLHKDIN---QNKDVDTDYN-----QIDCETFSQDTEKYASQDT--DNFIEKVKDQSLIE 391
Query: 313 KVDVTNVESVSSAVEL--STSPPPQVVEKKEHKCAEWEAIQ-TEPSTSEPQVHSRTADDS 369
D N E V L T P+ K+ K A + EP + + S
Sbjct: 392 --DGFNDEFSDEMVTLIEETDLTPKTSIKQSTKFRSLVAYEDVFDKKEEPLPDTSSISSS 449
Query: 370 LPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
LP ++ V R F+LDA+ED + QPGTVYLFGKV+++ + + SCCV V+NIDR++Y
Sbjct: 450 LP-TSNINGDDVLRFFWLDAYEDRFSQPGTVYLFGKVWIEASKCYVSCCVAVKNIDRQLY 508
Query: 430 LLPRSEHLKTKEPVSIAQVYSEFDQIA-TQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
+LPR +E Q A + KI++FK RK+ KKYAF+ VP +EYLE
Sbjct: 509 ILPRK---------------TELHQGAIAKNKIMEFKCRKVLKKYAFDKVEVPYEAEYLE 553
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLE--FPEAEKFPSRIS 546
+ YSA P L SDL G+TFSH+FG+ ++ LE L L +K++GPSW++ FP+ K +S
Sbjct: 554 LLYSADQPQLQSDLKGETFSHIFGSNTTSLELLFLNQKLQGPSWIDVKFPQIPK--QAVS 611
Query: 547 WCKYEV 552
WCK E
Sbjct: 612 WCKVEA 617
>gi|217344|dbj|BAA14340.1| DNA polymerase alpha [Drosophila melanogaster]
Length = 1505
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 335/740 (45%), Positives = 464/740 (62%), Gaps = 68/740 (9%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKG- 618
++ITN+CGN ++RTL GGRSERNEFLLLHA EK+Y++PDK+ + +T G
Sbjct: 788 LQITNICGNTMTRTLQGGRSERNEFLLLHASTEKNYIVPDKKPVSKRSGAGDTDRTLSGA 847
Query: 619 ----KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ +KKAAY+GGLVLEP +G Y+K+++LMD NSLYPSIIQEYNICF PV+ D+
Sbjct: 848 DATMQTKKKAAYAGGLVLEPMRGLYEKYVLLMDLNSLYPSIIQEYNICFN--PVQQPVDA 905
Query: 675 D-ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKL 733
D + TL P+ + + GILP ++K+LVESR++VK LM P+LS +L MQY IRQ ALKL
Sbjct: 906 DELPTL----PDSKTEPGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKL 961
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCN 793
TANSMYGCLGF +SRFFAQ LAALVT KGR+ L NT+ LV+ +NY+V+YGDTDSLMI+ N
Sbjct: 962 TANSMYGCLGFAHSRFFAQHLAALVTHKGRD-LTNTQQLVQKMNYDVVYGDTDSLMINTN 1020
Query: 794 VNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICS 853
+ DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK S G +
Sbjct: 1021 ITDYDQVYKIGHNIKQSVNKLYKQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRRE 1080
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
QE KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+T + G
Sbjct: 1081 QEHKGLDIVRRDWSQLAVMVGKAVLDEVLSEK-----PLEEKLDAVHAQLEKIKTQIAEG 1135
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
VPL L ITKQLT+ P++Y + +LPHVQVALR+N +++ K+GD + C DGT+
Sbjct: 1136 VVPLPLFVITKQLTRTPQDYRNSASLPHVQVALRMNRERNRRYKKGDMVDLCDCLDGTTN 1195
Query: 974 AATQRAYNIEELKN--NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
AA QRAY+++ELK + KL++D NYYL QIHPVVTR++E +EGTDA RIAECLG+D +
Sbjct: 1196 AAMQRAYHLDELKTSEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPT 1255
Query: 1032 LYRSQI----KESIQQSE-ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL 1086
+R +E+ +QSE E++L + Y+ C+ F F C+ +CK + + R
Sbjct: 1256 KFRQNAQRTQRENTEQSEGESLL---KTTLQLYRLCEPFRFQCV--TCKTEQLMASAYRP 1310
Query: 1087 S-THGVVFVLDECINPECKVPPY-TYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
++ + VL +C++P K + T+ I +LS + ++Y+ WL C+ P C+
Sbjct: 1311 GPSNSHIAVLQQCVSPSAKRHRFSTWQACAILQLS-----MVQRFYKNWLVCDHPDCNFN 1365
Query: 1145 TRRCPLGLKTR--LCTTCHKYKLHRVY---------------------TELQLYQQLSF- 1180
TR L K+ LC C VY + LSF
Sbjct: 1366 TRTHSLRKKSHRPLCQKCRSGSCWSVYGAGPVQSAVLPAIHVRPRQANAAAKTLVSLSFT 1425
Query: 1181 -FHYICDITKALTKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFSCEEK 1239
FH + TP ++ Y + + V++ L+SS+Y I+ L KLF+
Sbjct: 1426 AFHIEIIFCPYYQATLTPELE------QAYQLLYETVDQQLQSSSYVIISLSKLFARSLA 1479
Query: 1240 QPKLSRGVEREHVTVAEGEG 1259
Q +R H + +E G
Sbjct: 1480 QMSCNRAWRSPHRSNSECFG 1499
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 184/617 (29%), Positives = 292/617 (47%), Gaps = 116/617 (18%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RAKRQ++DK +FAA ++L+ LKG K K E ++VY+ V E+EY +R ++ DDW
Sbjct: 9 RAKRQRVDKNGRFAAMERLRQLKGTKNKCKVE-DQVDDVYDVVDEREYAKRAQEKYGDDW 67
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKK-----------NKNIQNPNAKGDI 154
I++DG GY ED R+ F+D+ E ++++ D +KK +N + K I
Sbjct: 68 IEEDGT-GYAEDLRDFFEDEDEYSDGEEDRKDSKKKKGVAPNSKKRPRENAKPVTGKASI 126
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKT---NEIVIPKEEPP 211
+ L +N V KK + + +DD+LAD+L E+ A T + K +I + +
Sbjct: 127 KNLFSNA-VPKKMDVKTSVKDDDILADILGEIKEEPAATSEKAEKVIAPAKISVTSRKFD 185
Query: 212 APTAKEYLANFSKPIKVEK----------------KIEKP----------------IKKE 239
A AKEY+ +F +KV++ +I KP IKKE
Sbjct: 186 AAAAKEYMNSFLNNMKVQEQERKKAEASSDNEMLERILKPKAAVPNTKVAFFSSPTIKKE 245
Query: 240 PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDN------SQQTQDVLP 293
P P E A+++ E+P D + +DD +N +QQT+ V
Sbjct: 246 PMP--------------EKTPAKKATEDPFSDNEMDFSCLDDDENQFDVEKTQQTEKV-- 289
Query: 294 EQAKVELQIEAIESQSIEEKVDVTNV-ESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQT 352
++++ EK + V E + E + SP E WE+I
Sbjct: 290 -----------SQTKTAAEKTSQSKVAEKSAPKKETTGSPKESESEDISRLLNNWESICQ 338
Query: 353 EPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENN 412
E V + D ++ ++D + R+++ +A+ED K PG V+LFG+
Sbjct: 339 MDDDFEKSVLTTEQDSTI--SSDQQ----LRLWYWEAYEDPVKIPGQVFLFGRT-----A 387
Query: 413 SHSSCCVIVQNIDRKIYLLPRSEHLK------TKEPVSIAQVYSEFD-QIATQYKILDFK 465
S C+ VQNI+R +YLLPR L TK+ V++A +Y EFD ++A Q K+ F+
Sbjct: 388 DGKSVCLRVQNINRVLYLLPRQFLLDPISKEPTKQKVTVADIYKEFDSEVANQLKLEFFR 447
Query: 466 SRKIEKKYAFNLPG--VPDLSEYLEVRYSAK--CPALPSDLSGDTFSHVFGTKSSFLENL 521
SRK+ K +A + G VP +YLEV Y P L +D ++ +H+FG ++ LE
Sbjct: 448 SRKVTKSFAHHAIGIEVPQSCDYLEVHYDGNKPLPNLSADKKYNSIAHIFGATTNALERF 507
Query: 522 LLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLS---------- 571
LL+RKIKGP WL+ + P+ +SWC EV + + + + G
Sbjct: 508 LLDRKIKGPCWLQVTGFKVSPTPMSWCNTEVTLTEPKNVELVQDKGKPAPPPPLTLLSLN 567
Query: 572 -RTLMGGRSERNEFLLL 587
RT M ++ RNE ++
Sbjct: 568 VRTSMNPKTSRNEICMI 584
>gi|380019792|ref|XP_003693786.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Apis florea]
Length = 1331
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 297/624 (47%), Positives = 426/624 (68%), Gaps = 20/624 (3%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KKAAY+GGLVLEPKKGFYDK I+LMDFNSLYPSIIQEYN+CFTT+P D ++
Sbjct: 691 KKKAAYTGGLVLEPKKGFYDKLILLMDFNSLYPSIIQEYNLCFTTVPGAAYADYGNLSI- 749
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
PE +++G++P+EI+KLVESR +VK LMK N+S +L MQY+IRQ ALKLTANSMYG
Sbjct: 750 ---PESNLESGVIPTEIRKLVESRGEVKKLMKATNISPELKMQYNIRQLALKLTANSMYG 806
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG + RF+A+ LAA+VTAKGREIL +TKSLVE LNYEVIYGDTDS+MI+ N+ DY+ V
Sbjct: 807 CLGATHCRFYAKGLAAMVTAKGREILQHTKSLVEKLNYEVIYGDTDSIMINTNLLDYEEV 866
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
F +G +IK E NKLYK++ELDIDGV++Y+LLL+KKKYAA+ ++KL NG++ +QE KG+D
Sbjct: 867 FSVGKKIKQEVNKLYKRVELDIDGVFRYLLLLQKKKYAAVIMTKLPNGQIELTQEHKGLD 926
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+VRRDW QLA + GK ++ +L Q +DR++ I + + ++ V L+ L
Sbjct: 927 IVRRDWCQLACDTGKKILDHLLSNQ-----PCEDRVEQIFMILHDVAQNVRENQVSLSSL 981
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAY 980
ITKQL+K P EY D K HVQVALRLN + K GDT+ YIIC+DGT ++AT+RAY
Sbjct: 982 VITKQLSKNPNEYPDTKQ-AHVQVALRLNKEGGRMWKTGDTVPYIICDDGTEKSATERAY 1040
Query: 981 NIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKES 1040
+I+E K LKIDVNYYL QI P+V R+ +PIEG D V +A+CLG+D ++Y+S+
Sbjct: 1041 HIDEYKKKDFLKIDVNYYLLSQIFPIVLRICDPIEGFDDVLLAKCLGVD-NIYKSK---- 1095
Query: 1041 IQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECIN 1100
+ E + +E K+++C +F C + C+ ++ ++ G L C N
Sbjct: 1096 -RMIHEEYSDIPLTDEDKFKYCLPLKFNCKDEKCQSEIILKNIIIETSTGNQLSLASCSN 1154
Query: 1101 PECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTR--LCT 1158
P+CK+PP+TY+ + N ++ + K + +YYEGWL+CE+P C T+ PLG + +C
Sbjct: 1155 PDCKIPPWTYVHIIQNAVTLAVRKAVSEYYEGWLECENPICGKQTQILPLGFDSTYPICR 1214
Query: 1159 TCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQHVER 1218
C +LHRV+T+ +LY Q+ F+ ++ +++++ K+ ++ Y +K+ +E+
Sbjct: 1215 KCKDGELHRVFTDTKLYNQMYFYFHLFNVSQSKYKNLLS--QYPQGMREAYDSLKETMEK 1272
Query: 1219 FLESSAYNIVDLKKLFSCEEKQPK 1242
L +A+++V L +F ++Q K
Sbjct: 1273 MLRRNAFSVVCLDTIFLNIDEQSK 1296
Score = 189 bits (480), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 146/245 (59%), Gaps = 26/245 (10%)
Query: 370 LPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
LPL T+ ++VFR ++ DA+ED YKQPG VYL GKVF+ + SCC+ ++NI R+IY
Sbjct: 240 LPLLTNANKEEVFRFYWWDAYEDPYKQPGVVYLLGKVFIPSLKEYCSCCLTIKNIPRRIY 299
Query: 430 LLPRSEHLKT--------KEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
LLPR ++KT ++ +I VY EF+Q A + I +F+S K+ K YAF G P
Sbjct: 300 LLPRV-YIKTSFKDNNEEEQLNTIEDVYKEFNQFANKLGIKEFRSSKVSKHYAFEQEGTP 358
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
+S+YLEVRY+A P +PSD SG + VFGT + LE LL+ER IKGP WLE
Sbjct: 359 AISDYLEVRYAAHYPPVPSDYSGPSIERVFGTTVNALELLLIERNIKGPCWLEIKCP--L 416
Query: 542 PSRI--SWCKYEVQCNQMEKIRITN--------VCGNVLSRTLMGGRSERNEFLLL---- 587
PS I SWCK +V C +ME I + + V + RT + + ++NE +++
Sbjct: 417 PSNIQTSWCKIKVNCMKMENISVFSEFQTLPPLVITTLNIRTSLNVKLQQNEIVMVAILI 476
Query: 588 -HAFH 591
H +H
Sbjct: 477 HHKYH 481
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 110/164 (67%), Gaps = 9/164 (5%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE 102
+ GR KRQKIDKT + +A +KLK LKG K+KYE ENVYEEV EKEYT+ V++RQ
Sbjct: 5 QSGRIKRQKIDKTGRLSALEKLKQLKGS--KNKYEIDKLENVYEEVDEKEYTKTVIERQS 62
Query: 103 DDWIDDDGGDGYVEDGREIFDDDIEDVP---QKKEKHDKRKKNKNIQNPNAKGDIQKLLA 159
DDWI DDG GY+EDGREIFDDD++D +K K KKNK N KG+IQ +L
Sbjct: 63 DDWIIDDGESGYIEDGREIFDDDLDDESIQEARKHKITGPKKNKK-DNIKMKGNIQNMLI 121
Query: 160 NMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTL-KLNTKTNE 202
NM KKK + +L++D++L DL+SE+ +P + KL T N+
Sbjct: 122 NM--SSKKKCDAKLDDDNILGDLMSELKKDNSPKMSKLRTVRNK 163
>gi|355712599|gb|AES04402.1| polymerase , alpha 1, catalytic subunit [Mustela putorius furo]
Length = 716
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/572 (54%), Positives = 406/572 (70%), Gaps = 28/572 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETG 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + ++ + G
Sbjct: 156 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEDIDG 215
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ANK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 216 DANKYKKGRKKAAYAGGLVLDPKAGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 275
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
IT E LP+ ++ GILP EI+KLVE R+QVK LMKQ +L+ DL++QYDIR
Sbjct: 276 AQKITEDGEQEQIPELPDPNLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDIR 335
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
QKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTDS
Sbjct: 336 QKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDS 395
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI+ N D + V+K+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKY AL + S+
Sbjct: 396 IMINTNSTDLEEVYKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYGALVVEPTSD 455
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G QE+KG+D+VRRDW LA E G FVI QIL +QS D ++NI + + +I
Sbjct: 456 GNYSTKQELKGLDIVRRDWCDLAKETGNFVIGQILSDQSR-----DTIVENIQKRLIEIG 510
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+IC
Sbjct: 511 ENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWMNSQGGRKVKAGDTVSYVIC 570
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+DG++ AA QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA LG
Sbjct: 571 QDGSNLAAGQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLG 630
Query: 1028 LDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
LD + +R + EEN +LG G A+ E KY+ C+KF+ C P+C N ++
Sbjct: 631 LDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYRDCEKFKCPC--PTCGTENIYDS 684
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHL 1114
S + L C N +CK P T++ +
Sbjct: 685 VLDGSGTDMEPSLYRCSNIDCKTSPLTFVVQM 716
>gi|47223504|emb|CAF97991.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1753
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 340/784 (43%), Positives = 464/784 (59%), Gaps = 124/784 (15%)
Query: 560 IRITNVCGNVL----------------SRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG 603
++ITN+ GN++ SRTLMGGRSERNEFLLLHAFHEK+Y++PDK
Sbjct: 985 LQITNIAGNIMVAHPRALFTVKERERESRTLMGGRSERNEFLLLHAFHEKNYIVPDKPSF 1044
Query: 604 K----NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEY 659
K ++ EG+E E KGK RKKAAY+GGLVL+PK GFYDKF++L+DFNSLYPSIIQE+
Sbjct: 1045 KKAQLDQAEGDEEVEVAKGKRRKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEF 1104
Query: 660 NICFTTIPVRMLQDS------DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ 713
NICFTT+ R Q S D +P+ ++ GILP EI+KLVE R+QVK LMKQ
Sbjct: 1105 NICFTTV-QREAQHSQKKNEDDEQEEIPEIPDSNLEPGILPKEIRKLVERRKQVKGLMKQ 1163
Query: 714 PNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNT---- 769
+++ D+ +QYDIRQKALKLTANSMYGCLGF SRF+A+PLAALVT KGRE+ +
Sbjct: 1164 QDINPDVYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREVDFDAHQRD 1223
Query: 770 -----KSLVEN-----------LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNK 813
+S +N +N +VIYGDTDS+MI+ N + VFK+GN++K+E NK
Sbjct: 1224 GPEVLRSANKNAQICFPSRPIQMNLDVIYGDTDSIMINTNSKSLEEVFKLGNKVKAEVNK 1283
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
LYK LE+DIDGV+K +LLLKKKKYAAL + L +G+ QE+KG+D+VRRDW LA +
Sbjct: 1284 LYKLLEIDIDGVFKSLLLLKKKKYAALVVENLGDGRYSLKQELKGLDIVRRDWCDLAKDC 1343
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
G +VI QIL +QS D ++NI +H+ ++ + G VPL+ EI K LTK P++Y
Sbjct: 1344 GNYVIGQILSDQSR-----DVIVENIQKHLVEVGEKVAAGDVPLSQYEIHKALTKDPQDY 1398
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-------------------------- 967
D+K+LPHV VAL +N+ +++K GDT+SYIIC
Sbjct: 1399 PDKKSLPHVHVALWINSQGGRRVKAGDTVSYIICKVRVCDRKTPVSGWPCCGPGRWLTCD 1458
Query: 968 ---------EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
+DG++ AA+QRAY +E+L+ L +D YYL+QQ+HPVV+R+ +PIEG D
Sbjct: 1459 RAAVCGVLTQDGSTLAASQRAYALEQLQKQEALSLDTQYYLAQQVHPVVSRICDPIEGID 1518
Query: 1019 AVRIAECLGLDTSLYRSQIKESIQQSEENILGVG--EAEEVKYQFCDKFEFTCMNPSCKQ 1076
V +A LGLD + +RSQ + + EN+LGV ++E +Y+ C+ F F C P C
Sbjct: 1519 GVLVATWLGLDPAQFRSQQQYQREDEAENMLGVSLQLSDEERYKDCEHFTFAC--PQCGA 1576
Query: 1077 VNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC 1136
N ++ S + L C + C+ P + L NKL D+ ++I KYY +
Sbjct: 1577 DNICDSVFEGSGATLEPSLMRCCHAPCQSRPVHHPVLLCNKLLLDIRRHIKKYYSVSIA- 1635
Query: 1137 EDPGCSD----------LTRRCPL--GLKTR--------LCTTCHKYKLHRVYTELQLYQ 1176
G SD LT PL G +TR L + L Y++ LY
Sbjct: 1636 ---GASDGPEPVLLRGTLTITAPLNQGKQTRGQGPAGPGLLILTVSFPLFSQYSDKALYN 1692
Query: 1177 QLSFFHYICDITKALT------KSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDL 1230
QL F+ I D A + KS + K + E Y ++K+ +R L +S Y+ ++L
Sbjct: 1693 QLCFYRSIFDWDAAFSKLQGDEKSRVKTWKGEKEAYR---RLKEVPDRALAASGYSDINL 1749
Query: 1231 KKLF 1234
KLF
Sbjct: 1750 AKLF 1753
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 116/276 (42%), Gaps = 86/276 (31%)
Query: 345 AEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGT----V 400
+ W + + + + P V + LPL + +VFR ++LDAFE+ Y PG+
Sbjct: 362 SSWGQEEEDAAGAAP-VEVQVDSSQLPLVEGPDGDQVFRFYWLDAFEEPYIHPGSSRPLR 420
Query: 401 YLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS------EHL----------------- 437
+ V + + C V V+ ++ +PR EH
Sbjct: 421 PGRRRRPVSDACAWPRCGVPVREGVDRVGQVPRQLLRYGQEHREDRVPPAPGAGEFSPPR 480
Query: 438 --------------------KTKE----PVSIAQVYSEFDQIATQYKILDFKSR------ 467
KT E PV++ VY EF++++ ++KI+ +KS+
Sbjct: 481 PSSPARPSPSLGFPGQRVDPKTGEASEAPVAMMDVYQEFNELSEKFKIMKYKSKVGVGAR 540
Query: 468 --------------------KIEKKYAFNLPGVPDLSEYLEV--------RYSAKCPALP 499
++EK YAF +P VP EYLEV A PALP
Sbjct: 541 GGGALGDGALTAACSISCFQRVEKNYAFEIPDVPSRCEYLEVPILGEHCGALQADFPALP 600
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEF 535
S+L TFSHVFGT +SFLE LLL RKIKGP WL
Sbjct: 601 SNLKASTFSHVFGTNTSFLEQLLLSRKIKGPCWLHL 636
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 84/146 (57%), Gaps = 23/146 (15%)
Query: 46 RAKRQKIDKTNKFAAFQKL-KDLKGQGVKHK--YEFTAD---------ENVYEEVSEKEY 93
R++R+K +K+ + +A +L K KG+ +K++ Y +A +VYEEV E++Y
Sbjct: 6 RSRREKKEKSGRKSALDQLQKAKKGEKIKYQRNYPLSASVGVSQVEELTSVYEEVDEEQY 65
Query: 94 TERVLKRQEDDWIDDDGGDGYVEDGREIFDDDI-EDVPQKKEKHD-------KRKKNKNI 145
++ V RQEDDWI DD G GYVEDGREIFDDD+ EDV + K + K K +
Sbjct: 66 SKLVRDRQEDDWIVDDDGIGYVEDGREIFDDDLDEDVMENKGRAGAKGAEAKKNVKKSAV 125
Query: 146 QNPNAKGDIQKLLANMPVKKKKKEEV 171
PN I+ L + VK+ +++V
Sbjct: 126 AKPNT---IKSLFMSSNVKRPAEKDV 148
>gi|307207775|gb|EFN85393.1| DNA polymerase alpha catalytic subunit [Harpegnathos saltator]
Length = 1482
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/681 (44%), Positives = 424/681 (62%), Gaps = 59/681 (8%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT + GN+LSRTL+GGR+ERNE+LLLHAFH K YV PDK+ K + N G
Sbjct: 822 LQITCLAGNILSRTLLGGRAERNEYLLLHAFHLKEYVTPDKKTEKKRD--------NDGP 873
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
+K AAY GGLVL+PKKGFYDK ++LMDFNSLYPSIIQEYN+CFTT+P + + ++
Sbjct: 874 RKKAAAYIGGLVLDPKKGFYDKLVLLMDFNSLYPSIIQEYNLCFTTVPGAAYAEVEHLSI 933
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
P+ ++TG++P+EI KLV+SR+Q+K LMK PNL+ + M Y IRQ ALKLTANSMY
Sbjct: 934 ----PDSTLETGVIPTEIHKLVKSRQQIKQLMKTPNLTPEQRMDYHIRQMALKLTANSMY 989
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG + RF+A+ LAAL+TAKGREIL +TK LVE L YE++
Sbjct: 990 GCLGATHCRFYAKGLAALITAKGREILEDTKHLVEKLQYEIM------------------ 1031
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
E N YK++ELDIDGV++Y+LLL+KKKYAA++++KL +G++ +QE KG+
Sbjct: 1032 ---------REVNNRYKKVELDIDGVFRYLLLLQKKKYAAVTMTKLPSGQLHLAQEHKGL 1082
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDW LA E GK ++ +L +QS + RL+ + + ++ + + G P++
Sbjct: 1083 DIVRRDWCPLACETGKKILDILLCDQSS-----ETRLEQVVQILQNVAKSVKEGTAPMSS 1137
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
ITKQL+K P+ Y D+K L HV VALRLN + K GDT+ YIICEDGT +AT+RA
Sbjct: 1138 FVITKQLSKNPDAYPDKKQLSHVMVALRLNKAGGRMWKAGDTLPYIICEDGTEASATERA 1197
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE 1039
Y+I+E+KN+ KLK+DVNYYL QI PVV R+ EPIEG D V +A LGL +Y+ +
Sbjct: 1198 YHIDEVKNSEKLKVDVNYYLLSQIFPVVLRICEPIEGIDDVFLANNLGLQF-IYKPK--- 1253
Query: 1040 SIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECI 1099
+I L + +E ++ C F C N C ++ G F L C
Sbjct: 1254 AIACEATLNLPLSINDE-RFDNCVPLTFKCRNERCNTEIIIKDTITEFHSGRQFSLSMCP 1312
Query: 1100 NPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL--C 1157
N +CK+PP+ Y + N + M K I KYY GWL+CE+P CS+ TRR PL + C
Sbjct: 1313 NQDCKLPPWRYANAIQNMVQLAMRKAIGKYYNGWLECENPLCSNRTRRLPLDFARKFPDC 1372
Query: 1158 TTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK---SDTPSIKFDSETYMGYCKMKQ 1214
C + RVY+ +LY QL ++H + DI + + K S P + Y +K+
Sbjct: 1373 PVCKDISMARVYSGTELYNQLYYYHRMFDIGQPIYKHLLSQCP-----RDMIAAYNTLKE 1427
Query: 1215 HVERFLESSAYNIVDLKKLFS 1235
++R L+ + ++ V++ +FS
Sbjct: 1428 AIDRQLKRNKFSCVNITGIFS 1448
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 194/575 (33%), Positives = 302/575 (52%), Gaps = 70/575 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
GR+KRQ+ DKT + +A +KLK+ + K KYE ENVY+EV EKEY+ VLKRQ D
Sbjct: 22 SGRSKRQRTDKTGRLSALEKLKEARSG--KRKYEVGELENVYDEVDEKEYSNTVLKRQRD 79
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK--------GDIQ 155
DWI DDGG GYVEDGREIFDDD+++ + + +++ N+ P K GDIQ
Sbjct: 80 DWIVDDGGSGYVEDGREIFDDDLDE----ESIQEAKRQKYNMAGPRKKRKEEERRKGDIQ 135
Query: 156 KLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKE--EPPAP 213
+ NMP KK +DD+L +LLSE++T+ K + I P+E
Sbjct: 136 NMFRNMP---SKKSNTNCKDDDILGELLSEISTS----KKTVDNSKRIQEPREIKNKFCH 188
Query: 214 TAKEYLA--NFSKPIKVE----KKIEKPIKKEPSPLKDE------------------IKS 249
T LA N S P+ E K I+KP + ++D+ + S
Sbjct: 189 TVHSDLAYKNQSSPVNQEANDKKIIQKPEENASQIIEDDDDTAAIFDAPQKKNTNKPMAS 248
Query: 250 NDSVMEVEMN--VAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDV------------LPEQ 295
ND M+ + + EE ++G+ +Q + D + Q + + E
Sbjct: 249 NDVRCYRNMSQRIEDTKLEEMQENGISKQTESKDTKHCQSASQLIDNESMEVELCSMSEL 308
Query: 296 AKVELQIEAIESQSIEEKV-DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEP 354
A V L E + + E V D++ ++ +++ S V+ ++++ + + +
Sbjct: 309 ASVCLTAEKKSNMDLNECVGDLSTIDFDDGSMDADFSSSVNSVKPQQNRTDITQNVTCKT 368
Query: 355 STSEPQVHSRT-ADDSLP-LATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENN 412
+ +V + + +P L + +VFR ++LDA+E+ YK PGTVYLFGK +V +
Sbjct: 369 TVIGIKVGNVVDFTEVVPQLVKTKDEVEVFRFYYLDAYENPYKNPGTVYLFGKTYVASRD 428
Query: 413 SHSSCCVIVQNIDRKIYLLPRSEHLKT---KEP--VSIAQVYSEFDQIATQYKILDFKSR 467
+ SCCV+V I R+IYLLPR ++LKT EP +I VY EFD+ A++ +I++F +
Sbjct: 429 MYCSCCVMVHCIPRRIYLLPR-KYLKTPKSGEPQLTTIEDVYKEFDEYASKMRIMEFNCK 487
Query: 468 KIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKI 527
+ +K Y+F G P S+YLEVRY+A+ PA+ ++ SG VFG+ + LE LL+ERKI
Sbjct: 488 ETKKHYSFEKEGTPKTSDYLEVRYNARYPAIEANYSGPAIERVFGSTVNALELLLIERKI 547
Query: 528 KGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
KGP WL+ R +WC+ V + ++ + +
Sbjct: 548 KGPGWLDVKNVSPTAGRFAWCQQIVVTSDIDNVSL 582
>gi|3551068|dbj|BAA32745.1| DNA polymerase alpha 180K subunit [Drosophila melanogaster]
Length = 1415
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 292/558 (52%), Positives = 395/558 (70%), Gaps = 29/558 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKG- 618
++ITN+CGN ++RTL GGRSERNEFLLLHA EK+Y++PDK+ + +T G
Sbjct: 788 LQITNICGNTMTRTLQGGRSERNEFLLLHASTEKNYIVPDKKPVSKRSGAGDTDRTLSGA 847
Query: 619 ----KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ +KKAAY+GGLVLEP +G Y+K+++LMD NSLYPSIIQEYNICF PV+ D+
Sbjct: 848 DATMQTKKKAAYAGGLVLEPMRGLYEKYVLLMDLNSLYPSIIQEYNICFN--PVQQPVDA 905
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
D LP+ + + GILP ++K+LVESR++VK LM P+LS +L MQY IRQ ALKLT
Sbjct: 906 D---ELPTLPDSKTEPGILPLQLKRLVESRKEVKKLMAAPDLSPELQMQYHIRQMALKLT 962
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF +SRFFAQ LAALVT KGR+ L NT+ LV+ +NY+V+YGDTDSLMI+ N+
Sbjct: 963 ANSMYGCLGFAHSRFFAQHLAALVTHKGRD-LTNTQQLVQKMNYDVVYGDTDSLMINTNI 1021
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
DYD V+KIG+ IK NKLYKQLELDIDGV+ +LLLKKKKYAA+ +SK S G + Q
Sbjct: 1022 TDYDQVYKIGHNIKQSVNKLYKQLELDIDGVFGCLLLLKKKKYAAIKLSKDSKGNLRREQ 1081
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E KG+D+VRRDWSQLA GK V+ ++L E+ L+++L +H ++KI+T + G
Sbjct: 1082 EHKGLDIVRRDWSQLAVMVGKAVLDEVLSEK-----PLEEKLDAVHAQLEKIKTQIAEGV 1136
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
VPL L ITKQLT+ P++Y + +LPHVQVALR+N +++ K+GD + C DGT+ A
Sbjct: 1137 VPLPLFVITKQLTRTPQDYRNSASLPHVQVALRMNRERNRRYKKGDMVDLCDCLDGTTNA 1196
Query: 975 ATQRAYNIEELKN--NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
A QRAY+++ELK + KL++D NYYL QIHPVVTR++E +EGTDA RIAECLG+D +
Sbjct: 1197 AMQRAYHLDELKTSEDKKLQLDTNYYLGHQIHPVVTRMVEVLEGTDASRIAECLGMDPTK 1256
Query: 1033 YRSQI----KESIQQSE-ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
+R +E+ +QSE E++L + Y+ C+ F F C+ +CK + + R
Sbjct: 1257 FRQNAQRTQRENTEQSEGESLL---KTTLQLYRLCEPFRFQCV--TCKTEQLMASAYRPG 1311
Query: 1088 -THGVVFVLDECINPECK 1104
++ + VL +C++P K
Sbjct: 1312 PSNSHIAVLQQCVSPSAK 1329
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 185/627 (29%), Positives = 296/627 (47%), Gaps = 117/627 (18%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RAKRQ++DK +FAA ++L+ LKG K K E ++VY+ V E+EY +R ++ DDW
Sbjct: 9 RAKRQRVDKNGRFAAMERLRQLKGTKNKCKVEDQV-DDVYDVVDEREYAKRAQEKYGDDW 67
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKK-----------NKNIQNPNAKGDI 154
I++DG GY ED R+ F+D+ E ++++ D +KK +N + K I
Sbjct: 68 IEEDG-TGYAEDLRDFFEDEDEYSDGEEDRKDSKKKKGVAPNSKKRPRENAKPVTGKASI 126
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKT---NEIVIPKEEPP 211
+ L +N V KK + + +DD+LAD+L E+ A T + K +I + +
Sbjct: 127 KNLFSNA-VPKKMDVKTSVKDDDILADILGEIKEEPAATSEKAEKVIAPAKISVTSRKFD 185
Query: 212 APTAKEYLANFSKPIKVEK----------------KIEKP----------------IKKE 239
A AKEY+ +F +KV++ +I KP IKKE
Sbjct: 186 AAAAKEYMNSFLNNMKVQEQERKKAEASSDNEMLERILKPKAAVPNTKVAFFSSPTIKKE 245
Query: 240 PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDN------SQQTQDVLP 293
P P E A+++ E+P D + +DD +N +QQT+ V
Sbjct: 246 PMP--------------EKTPAKKATEDPFSDNEMDFSCLDDDENQFDVEKTQQTEKV-- 289
Query: 294 EQAKVELQIEAIESQSIEEKVDVTNV-ESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQT 352
++++ EK + V E + E + SP E WE+I
Sbjct: 290 -----------SQTKTAAEKTSQSKVAEKSAPKKETTGSPKESESEDISRLLNNWESICQ 338
Query: 353 EPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENN 412
E V + D ++ ++D + R+++ +A+ED K PG V+LFG+
Sbjct: 339 MDDDFEKSVLTTEQDSTI--SSDQQ----LRLWYWEAYEDPVKIPGQVFLFGRT-----A 387
Query: 413 SHSSCCVIVQNIDRKIYLLPRSEHLK------TKEPVSIAQVYSEFD-QIATQYKILDFK 465
S C+ VQNI+R +YLLPR L TK+ V++A +Y EFD ++A Q K+ F+
Sbjct: 388 DGKSVCLRVQNINRVLYLLPRQFLLDPISKEPTKQKVTVADIYKEFDSEVANQLKLEFFR 447
Query: 466 SRKIEKKYAFNLPG--VPDLSEYLEVRYSAK--CPALPSDLSGDTFSHVFGTKSSFLENL 521
SRK+ K +A + G VP +YLEV Y P L +D ++ +H+FG ++ LE
Sbjct: 448 SRKVTKSFAHHAIGIEVPQSCDYLEVHYDGNKPLPNLSADKKYNSIAHIFGATTNALERF 507
Query: 522 LLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLS---------- 571
LL+RKIKGP WL+ + P+ +SWC EV + + + + G
Sbjct: 508 LLDRKIKGPCWLQVTGFKVSPTPMSWCNTEVTLTEPKNVELVQDKGKPAPPPPLTLLSLN 567
Query: 572 -RTLMGGRSERNEFLLLHAF-HEKSYV 596
RT M ++ RNE ++ H + ++
Sbjct: 568 VRTSMNPKTSRNEICMISMLTHNRFHI 594
>gi|332030575|gb|EGI70263.1| DNA polymerase alpha catalytic subunit [Acromyrmex echinatior]
Length = 1447
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 294/622 (47%), Positives = 401/622 (64%), Gaps = 22/622 (3%)
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
G RK AAY+GGLVLEPKKGFYDK ++LMDFNSLYPSIIQEYN+CFTT+P D +
Sbjct: 811 GPRRKAAAYTGGLVLEPKKGFYDKLVLLMDFNSLYPSIIQEYNLCFTTVPGAAYTDVEQL 870
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMK-QPNLSSDLLMQYDIRQKALKLTAN 736
T+ PE ++ G++P+EI KLV+SR+Q+K LMK Q NLS M Y IRQ ALKLTAN
Sbjct: 871 TI----PESNLEPGVVPTEIHKLVKSRQQIKQLMKTQKNLSPAQKMDYHIRQMALKLTAN 926
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
SMYGCLG + RF+A+ LAAL+TAKGREIL +TK LVE L YEVIYGDTDSLMI+ N+ +
Sbjct: 927 SMYGCLGATHCRFYAKGLAALITAKGREILEDTKHLVEKLQYEVIYGDTDSLMINTNILE 986
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
YD VF IG +I E N YK++ELDIDGV++Y+LLL+KKKYAA+ +SK+ +G++ +QE
Sbjct: 987 YDDVFLIGKKIMREVNNRYKKVELDIDGVFRYLLLLQKKKYAAVMMSKI-DGQIQLTQEH 1045
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
KG+D+VRRDW LA + GK ++ +L +QS + RL+ + + ++ + + G P
Sbjct: 1046 KGLDIVRRDWCPLACDTGKKILDILLCDQSS-----ETRLEQVVQILQNVAKSVKEGTTP 1100
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT 976
L+ ITKQL+K P+ Y D+K L HV VALRLN + K GDT+ Y+IC+D T+ +AT
Sbjct: 1101 LSSFVITKQLSKNPDAYPDKKQLSHVMVALRLNKAGGRMWKAGDTLPYVICKDETNASAT 1160
Query: 977 QRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
+RAY+I+E+KN+ KLK+DVNYYL QI PVV R+ EPIEG D V +A LGL +Y+ +
Sbjct: 1161 ERAYHIDEVKNSEKLKVDVNYYLLSQIFPVVLRICEPIEGIDDVFLANNLGLQF-IYKPK 1219
Query: 1037 IKESIQQSEENILGVGEA-EEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVL 1095
S E L + A + ++ C F C N C ++ G L
Sbjct: 1220 -----TISCEATLNLPLAINDDRFNNCLPLTFKCKNERCNTEIIIKDTVTEFHSGRQLSL 1274
Query: 1096 DECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTR 1155
C N +CK+PP+ Y + N + M K I KYY GWL+CE+P CS+ TRR PL +
Sbjct: 1275 SMCPNQDCKLPPWKYANVIQNVVQLAMRKAITKYYNGWLECENPLCSNRTRRLPLDFTKK 1334
Query: 1156 L--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMK 1213
C+ C ++RVY+ LY QL ++H + DIT+ K D Y +K
Sbjct: 1335 FPDCSMCKDVSMNRVYSGTDLYNQLYYYHKMFDITQPAYKHLLSQCSRD--MIAAYNTLK 1392
Query: 1214 QHVERFLESSAYNIVDLKKLFS 1235
+ ++R L+ + ++ V++ +FS
Sbjct: 1393 EAIDRQLKRNKFSCVNITGIFS 1414
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 302/562 (53%), Gaps = 44/562 (7%)
Query: 31 ACSSFCVGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSE 90
C +F G Q GR++RQKIDKT + +A ++LK+ + G K KYE ENVY+EV E
Sbjct: 16 GCLTF--GKQASTSGRSRRQKIDKTGRLSALERLKEARS-GNKRKYEVEELENVYDEVDE 72
Query: 91 KEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNA 150
KEY+ VLKRQ DDWI DDG GY+EDGREIFDDD+++ + + RK+ ++ P
Sbjct: 73 KEYSNTVLKRQRDDWIVDDGESGYIEDGREIFDDDLDE----ESIREARKQRNSMAGPRK 128
Query: 151 K--------GDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNT----TIAPTLKLNT 198
+ GDIQ ++ NMP KK +Q+ +DD+L +LLSE++T T +P KL +
Sbjct: 129 RKKEDNKKKGDIQSMIRNMP-SKKDVNVIQIKDDDILGELLSEISTNKKTTSSP--KLGS 185
Query: 199 KTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEM 258
N+ + + Y A+ + +K I + + S + +S ++E +
Sbjct: 186 NRNKFC---HTVHSNITQTYQASSMNQKEADKIISEKLVTIVSNFDNIPQSESQIIEDDD 242
Query: 259 NVA------EQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIE- 311
++ ++S +PV+ + +++ + Q T+ + + QI E+ I
Sbjct: 243 DMTLFDAPQKKSTSKPVELNNYSKIEENSKSEDQSTKKSMESNKQSASQIIEEENTPIMD 302
Query: 312 -----EKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTA 366
E + + + S + S+S +K + K E TS + A
Sbjct: 303 LSECVEDLSTIDFDDGSMDTDFSSSINNVKSQKIDVKTPEIGVKIPAHKTSIKSMKIGNA 362
Query: 367 DD----SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQ 422
D + L + ++VFR ++LDA+E+ YK PGTVYLFGK +V ++++ SCCV+V
Sbjct: 363 IDLTEVAPQLVKTKDEEEVFRFYYLDAYENPYKNPGTVYLFGKTYVSSHDTYCSCCVMVH 422
Query: 423 NIDRKIYLLPRSEHLKTKEP--VSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGV 480
I R+IYLLPR +++K E ++ VY EFD+ A + +I++F ++++K Y+F G
Sbjct: 423 CIPRRIYLLPR-KYIKNTESQLTTMEDVYKEFDEYANKMRIMEFNCKEVKKHYSFEKEGT 481
Query: 481 PDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
P S+YLEVRY+A+ PA+ S+ SG HVFGT + LE LL+ERKIKGP WL+
Sbjct: 482 PKTSDYLEVRYNARYPAIDSNYSGPAIEHVFGTTVNALELLLIERKIKGPCWLDIKNISP 541
Query: 541 FPSRISWCKYEVQCNQMEKIRI 562
R +WC V + M I +
Sbjct: 542 TAGRFAWCPQIVVTSDMNNISL 563
>gi|324500375|gb|ADY40178.1| DNA polymerase alpha catalytic subunit [Ascaris suum]
Length = 1617
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 321/704 (45%), Positives = 425/704 (60%), Gaps = 52/704 (7%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKG- 618
++IT G VLSRTLMGGR+ERNEFLLLHAF + YV P+K ++KK+ + T +A
Sbjct: 931 VQITQTVGGVLSRTLMGGRAERNEFLLLHAFQKAGYVPPNKHQYEHKKKTQSTEKAIAED 990
Query: 619 --------KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM 670
K KKA Y+GGLVLEPKKG YDK+++L+DFNSLYPSIIQEYNICFTT+
Sbjct: 991 EQEEHVDEKSSKKAQYTGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVDQSK 1050
Query: 671 LQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
+D + LP++Q + GILP EI+ LVE RR VK LM LS QY+IRQ A
Sbjct: 1051 RKDE---SEVPELPDNQ-NEGILPREIRVLVERRRDVKNLMSSEKLSDHQRQQYNIRQMA 1106
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANSMYGCLGF +SRF+A+PLAAL+T++GREIL++TK LVE Y VIYGDTDS+MI
Sbjct: 1107 LKLTANSMYGCLGFTHSRFYAKPLAALITSRGREILMHTKDLVEKQGYAVIYGDTDSIMI 1166
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ + D + V K+G ++K NK +K+LELDIDGVYK +LLLKKKKYA L++ + K+
Sbjct: 1167 NTGLEDLEQVKKLGLELKRMVNKCHKRLELDIDGVYKRLLLLKKKKYAGLAVDLNDSSKV 1226
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
+E+KG+D+VRRDWS LA + G V+ IL D+ ++ IH+ ++ +R +L
Sbjct: 1227 --KREMKGLDIVRRDWSVLAKDIGNEVVDMILS----LSLGRDELVERIHDRLRALRKEL 1280
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
D G + ++ EI KQLT+ P EYTD KA PH VA RLN + +GDT+SYIICEDG
Sbjct: 1281 DEGLIDISKYEILKQLTRDPNEYTDIKAQPHAAVARRLNASGKFHFHRGDTVSYIICEDG 1340
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
+ +A QRAY+ E+ + S+L ID YYL+ Q+HPVV RL EPIE TDAV+IAE LGLD+
Sbjct: 1341 SGNSAAQRAYHKSEITSRSELTIDTLYYLAHQVHPVVCRLCEPIEETDAVQIAEALGLDS 1400
Query: 1031 SLYRSQ---IKESIQQSEENILGVGEAEEVKYQF--CDKFEFTCMNPSCKQVNTVEAPTR 1085
S YRS+ + E +E+ LG+ Y F C F F C CK + +
Sbjct: 1401 SGYRSRGVLMNEYHDDNEDFSLGLN------YDFSRCRPFTFNCPYDGCKAEIEIREALQ 1454
Query: 1086 LSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+ F L EC +CK Y +LIN+L N I +YY CED C+ T
Sbjct: 1455 GEGLDIGFCLGEC--QKCKRSLIRYGAYLINRLHLAQNSAIEEYYTSSFICEDIVCAYRT 1512
Query: 1146 RRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK---------- 1193
R L C CH + R T L++Q SFF + D+ KA+++
Sbjct: 1513 RMHVLNWSREGVHCPRCHIGIMRREKTARMLFEQQSFFRSLFDLPKAISECKPEQQKKLK 1572
Query: 1194 --SDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
D I + +G C + +L + +N V L LF+
Sbjct: 1573 TCRDAEKIFALHASLLGIC------DEYLSRNDFNRVSLAYLFA 1610
Score = 146 bits (368), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 126/210 (60%), Gaps = 12/210 (5%)
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHS-SCCVIVQNIDRKIYLLPR 433
D + + + R ++LDAFED K PGTVYLFG+V NNS S SCCVIV+NI R+++ LPR
Sbjct: 502 DDDGRSIVRFYWLDAFEDPIKFPGTVYLFGRVI---NNSISESCCVIVRNIWRQVFFLPR 558
Query: 434 SEH----LKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
+ + E V +V +E + Q + K R ++ +AFN +P +E LEV
Sbjct: 559 ETRFLNGIDSGEKVDFLEVNNEVQSLLKQIGVSIVKCRPTKRNFAFNDGIIPKNAEVLEV 618
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
+YS+ P L +++ GDTFSHVF T ++ +E LLLE ++GPSW+E + + S+ K
Sbjct: 619 QYSSTFPKLSAEMKGDTFSHVFNTTATAMERLLLEVDMRGPSWMEITDYVVSSPQQSYAK 678
Query: 550 YE--VQCNQMEKIRITNVCGNVL-SRTLMG 576
+E V +M+ +R+ CG+ + + TLM
Sbjct: 679 HEFIVDMERMKSLRVVE-CGDPMPTVTLMA 707
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 38 GTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEF-TADENVYEEVSEKEYTER 96
G ++ RA + +T A ++++ + G+ H+ + + VYEEV E EY
Sbjct: 138 GGERRSSRRAHISRRKETQN-KALEEVRRARATGLVHRVDVDNLIKPVYEEVDEDEYINI 196
Query: 97 VLKRQEDDWIDDDGGDGYVEDGREIFDDDIE 127
V +RQ DD++ DD G GYV+ G +IFDD+ E
Sbjct: 197 VRERQNDDFVVDDDGSGYVDHGVDIFDDEDE 227
>gi|335309430|ref|XP_001926748.3| PREDICTED: DNA polymerase alpha catalytic subunit, partial [Sus
scrofa]
Length = 701
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/482 (57%), Positives = 361/482 (74%), Gaps = 19/482 (3%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE-------GEET 612
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + ++ +
Sbjct: 181 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEDIDG 240
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ KGRKKAAYSGGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 241 DASKYKKGRKKAAYSGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 300
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KLVE RRQVK LMKQP+L+ DL++QYDI
Sbjct: 301 AEKVTEDGEQEQIPE-LPDPGLEMGILPREIRKLVERRRQVKQLMKQPDLNPDLVLQYDI 359
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQKALKLTANSMYGCLGF SRF+A+PLAALVT KGREIL++TK +V+ +N EVIYGDTD
Sbjct: 360 RQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTD 419
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N N + VFK+GN++KSE NKLYK LE+DIDG++K +LLLKKKKYAAL + S
Sbjct: 420 SIMINTNSNSLEEVFKLGNKVKSEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALVVEPTS 479
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G I QE+KG+D++RRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 480 DGNYITKQEVKGLDIIRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 534
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SYII
Sbjct: 535 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYII 594
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ +A E+L+ + L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 595 CQDGSNLSAXXXXXXXEQLQKHDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 654
Query: 1027 GL 1028
L
Sbjct: 655 AL 656
>gi|156379319|ref|XP_001631405.1| predicted protein [Nematostella vectensis]
gi|156218445|gb|EDO39342.1| predicted protein [Nematostella vectensis]
Length = 1242
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 306/690 (44%), Positives = 420/690 (60%), Gaps = 31/690 (4%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK--KEGEETGEANKG 618
+IT + GNVLSRTL+GGRS+RNEFLLLHAFHEK Y+ PDK YGK + +E ++
Sbjct: 563 QITTIAGNVLSRTLLGGRSKRNEFLLLHAFHEKGYICPDKSYGKKQVVREDDDDHVTTTK 622
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD--SDI 676
KGR+K AY+GGLVLEPKKGFYDKFI+L+DFNSLYPSIIQEYNICFTTI + +D DI
Sbjct: 623 KGRRKPAYAGGLVLEPKKGFYDKFILLLDFNSLYPSIIQEYNICFTTIDRKSAKDEEDDI 682
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
L P+ D GILP+EI+KLVE RRQVK +MK + SD +QYDIRQKALKLTAN
Sbjct: 683 VDL----PDMDQDPGILPTEIRKLVERRRQVKGMMKTVSRDSDKYLQYDIRQKALKLTAN 738
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
SMYGCLGF +SRF+A+PLAALVT+KGREIL+ TK LV+ ++ +VIYGDTDS+MI+ N D
Sbjct: 739 SMYGCLGFSHSRFYAKPLAALVTSKGREILMKTKDLVQQMHLDVIYGDTDSIMINTNSTD 798
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
V K+GN+++ + Y L + + +L + +YAA+ IS+ +G M +E+
Sbjct: 799 LQEVKKVGNKVRHP-HATYLVLPVSYTLRFVNLLHILFSRYAAIMISENEDGTMNEVKEM 857
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
KG+D+VRRDW LA +AG +V+SQIL QS + + N+H+ + I D+ G V
Sbjct: 858 KGLDIVRRDWCDLAKDAGNYVLSQILSAQSR-----EAIVDNVHDFLITIGEDVKGGKVD 912
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT 976
L I KQLTKAP +Y D+K+LPHV VAL L + S+K+ GDTI Y+IC+
Sbjct: 913 LQKYVINKQLTKAPHDYPDKKSLPHVHVALWL-MSKSRKVGVGDTIPYVICDVSMHLPLV 971
Query: 977 QRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
+ L ++ L ++ + +PI+GTD+ RIAECLGLD S YR
Sbjct: 972 TCGALVHYLLRYLWRTCTLSLTLPVTHVYTISYISDPIDGTDSARIAECLGLDPSGYRHA 1031
Query: 1037 IKESIQQSEENILGVGE-AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVL 1095
+++ + G + +E +++ C + C P C Q T+E + ++ +
Sbjct: 1032 ATRHDDEADALLGGQAQMTDEERFKDCVRLVLKCKQPGCDQQTTIEELCKDASARTPLLS 1091
Query: 1096 DECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPL--GLK 1153
C E P T +IN L+ + K+I +YY GW +CEDP C TR+ PL
Sbjct: 1092 ALCPGCEKLYSPAT----VINHLTVIIRKHIKEYYAGWQRCEDPSCDHRTRQVPLMHHRG 1147
Query: 1154 TRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL-TKSDTPSIKFDSETYMG---- 1208
T C CH+ + VY++ LY QL F+ + D +AL T D F ++Y+
Sbjct: 1148 TPTCPNCHRAHMLPVYSDTALYNQLLFYGRLFDADRALKTLKDNGGKDFLLKSYLKENKI 1207
Query: 1209 ----YCKMKQHVERFLESSAYNIVDLKKLF 1234
Y + ++R +E++AY+ VDL KLF
Sbjct: 1208 VKSFYTDVHTALQRIIEANAYSEVDLAKLF 1237
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 86/134 (64%), Gaps = 8/134 (5%)
Query: 368 DSLPLATDHEN--KKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNID 425
D+ P+ E +K + ++ DA+ED KQPG VYLFGKV ++ + SCCV ++NID
Sbjct: 170 DAKPIKVKEEKVCEKFLQFYWFDAYEDRIKQPGVVYLFGKVKIESAGKYVSCCVTIKNID 229
Query: 426 RKIYLLPRSEHL-----KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPG 479
R I++LPR + + +++ V VY EF++ IA++ KI+ F RK+EK YAF++
Sbjct: 230 RNIFILPREKRIGADGSESENSVGFKDVYEEFNEKIASKNKIMKFVCRKVEKSYAFDIED 289
Query: 480 VPDLSEYLEVRYSA 493
+P SEYLEVRYS
Sbjct: 290 IPTSSEYLEVRYSV 303
Score = 73.2 bits (178), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 82 ENVYEEVSEKEYTERVLKRQEDDWI-DDDGGDGYVEDGREIFDDDI-EDVPQKKEKHDKR 139
++VY V E+EY++ V +RQE+DW+ DDDG GYVEDGREIFDDD+ E+ QK KH +
Sbjct: 12 KDVYRVVDEEEYSDIVRQRQEEDWVVDDDGAGGYVEDGREIFDDDLDEEEVQKGPKH--K 69
Query: 140 KKNKNIQNPNAKG 152
K +N++ P K
Sbjct: 70 PKKQNVKKPTVKA 82
>gi|256089821|ref|XP_002580953.1| DNA polymerase alpha catalytic subunit [Schistosoma mansoni]
Length = 1017
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 321/752 (42%), Positives = 437/752 (58%), Gaps = 86/752 (11%)
Query: 554 CNQME----KIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
C+Q++ ++IT++CGNVLSRTL GGR+ERNE LLLHAF + Y++PD
Sbjct: 270 CHQLQVLPLAMQITSICGNVLSRTLSGGRAERNEALLLHAFTQHGYIVPDPPVSHRGPHS 329
Query: 610 ---------EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYN 660
+E + G GR+K AY+GGLVLEPKKGFYDK+I+L+DFNSLYPSIIQE+N
Sbjct: 330 NRHDEWDGIQEQAVEDAGTGRRKPAYTGGLVLEPKKGFYDKYILLLDFNSLYPSIIQEFN 389
Query: 661 ICFTTIPVRMLQDSDITTLCEYLPE-HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSD 719
ICFTT+ D D+ E + G+LP+EI++LVESR++VK L+ + S D
Sbjct: 390 ICFTTV------DRDLVATTSSDKEVFDQEPGLLPAEIRRLVESRKEVKKLLANTS-SGD 442
Query: 720 LL--MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN 777
Q++ RQ ALKLTANS+YGCLGF SRF A+ LAALVT GR +L+NT+ LVEN+N
Sbjct: 443 AAQRAQWNTRQAALKLTANSVYGCLGFAASRFCARGLAALVTGLGRAVLMNTRDLVENMN 502
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
EVIYGDTDS+M++ N D + IG +I+ E NK Y+ LELD DGVY MLLL KKKY
Sbjct: 503 MEVIYGDTDSIMVNTNTTDLLAALAIGEKIRQEVNKHYRLLELDTDGVYAAMLLLAKKKY 562
Query: 838 AALSI---------SKLS-----NGKMICS-QEIKGVDVVRRDWSQLASEAGKFVISQIL 882
AALS+ +K+S +++C+ QE+KG+D+VRRDWS LA G+ ++ +L
Sbjct: 563 AALSVINPVQWATAAKISINQGLTPQVVCTKQEMKGLDIVRRDWSALAISVGRRCVAALL 622
Query: 883 DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHV 942
+ D LD ++ E +K+R G +P++ ITK LTK PE+Y+D K+ PHV
Sbjct: 623 SGEP-KDIILDRIHADLTETAEKVR----QGKLPISEFIITKMLTKNPEDYSDAKSQPHV 677
Query: 943 QVALRLNN-------TNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELK------NNS 989
QVALRLN T +++L+ GDT+ Y+ICEDG+ + AT R Y+ EL ++
Sbjct: 678 QVALRLNGSAADDKKTGTRRLRAGDTVEYVICEDGSGQLATHRGYSPTELTSCLYKVSDG 737
Query: 990 KLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY-RSQIKESIQQSEENI 1048
L IDVNYYL+ QIHPVV+RL+ PIEGT RIA+CLGLD S Y RS + + + +EN
Sbjct: 738 NLSIDVNYYLAHQIHPVVSRLVAPIEGTSPARIADCLGLDPSGYRRSNVTTVVDEDDENN 797
Query: 1049 LGVGEAEEV-KYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECK--- 1104
+G + + C E +N C + N P + T V P C
Sbjct: 798 PDIGFSSGFSSFTNCGDVESLYIN--CPR-NCGGPPIAIKTSAFSVVGKTWFCPTCSHNL 854
Query: 1105 VPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR--RCPL-----------G 1151
+ + N+L + + IV Y GW+ CEDP C+ +TR CP G
Sbjct: 855 LLSQDSARLVTNRLVFEARRLIVHYQLGWMTCEDPACAVVTRSLHCPPSSGHHTIGESDG 914
Query: 1152 LKTR----LCTTC-HKYKLHRVYTELQLYQQLSFFHYIC---DITKALTKSDTPSIKFDS 1203
L R LC C + L Y+E +LY+QL FF Y+ + A + +D I
Sbjct: 915 LWARGGRPLCGVCGGQAALKSNYSEAKLYRQLCFFRYLVTPPNNKNAGSNADM-EITLPP 973
Query: 1204 ETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ + H +R L SA+ +VDL KLFS
Sbjct: 974 VVSSILSQCRNHFDRLLSHSAFAMVDLGKLFS 1005
>gi|350645837|emb|CCD59476.1| DNA polymerase alpha catalytic subunit,putative [Schistosoma mansoni]
Length = 1644
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 326/792 (41%), Positives = 444/792 (56%), Gaps = 124/792 (15%)
Query: 554 CNQME----KIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
C+Q++ ++IT++CGNVLSRTL GGR+ERNE LLLHAF + Y++PD
Sbjct: 855 CHQLQVLPLAMQITSICGNVLSRTLSGGRAERNEALLLHAFTQHGYIVPDPPVSHRGPHS 914
Query: 610 ---------EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYN 660
+E + G GR+K AY+GGLVLEPKKGFYDK+I+L+DFNSLYPSIIQE+N
Sbjct: 915 NRHDEWDGIQEQAVEDAGTGRRKPAYTGGLVLEPKKGFYDKYILLLDFNSLYPSIIQEFN 974
Query: 661 ICFTTIPVRMLQ-----------DSDITTLCEY--------------------LPEHQVD 689
ICFTT+ ++ D+ +TTL LP Q +
Sbjct: 975 ICFTTVDRDLVATTSSDKEPLDLDTIVTTLIATVHGDSNSISVSKSDNDKKIRLPVDQ-E 1033
Query: 690 TGILPSEIKKLVESRRQVKALMKQPNLSSDLL--MQYDIRQKALKLTANSMYGCLGFPNS 747
G+LP+EI++LVESR++VK L+ + S D Q++ RQ ALKLTANS+YGCLGF S
Sbjct: 1034 PGLLPAEIRRLVESRKEVKKLLANTS-SGDAAQRAQWNTRQAALKLTANSVYGCLGFAAS 1092
Query: 748 RFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQI 807
RF A+ LAALVT GR +L+NT+ LVEN+N EVIYGDTDS+M++ N D + IG +I
Sbjct: 1093 RFCARGLAALVTGLGRAVLMNTRDLVENMNMEVIYGDTDSIMVNTNTTDLLAALAIGEKI 1152
Query: 808 KSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI---------SKLS-----NGKMICS 853
+ E NK Y+ LELD DGVY MLLL KKKYAALS+ +K+S +++C+
Sbjct: 1153 RQEVNKHYRLLELDTDGVYAAMLLLAKKKYAALSVINPVQWATAAKISINQGLTPQVVCT 1212
Query: 854 -QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
QE+KG+D+VRRDWS LA G+ ++ +L + D LD ++ E +K+R
Sbjct: 1213 KQEMKGLDIVRRDWSALAISVGRRCVAALLSGEP-KDIILDRIHADLTETAEKVR----Q 1267
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN-------TNSKKLKQGDTISYI 965
G +P++ ITK LTK PE+Y+D K+ PHVQVALRLN T +++L+ GDT+ Y+
Sbjct: 1268 GKLPISEFIITKMLTKNPEDYSDAKSQPHVQVALRLNGSAADDKKTGTRRLRAGDTVEYV 1327
Query: 966 ICEDGTSEAATQRAYNIEELKN-------------NSKLKIDVNYYLSQQIHPVVTRLLE 1012
ICEDG+ + AT R Y+ EL + L IDVNYYL+ QIHPVV+RL+
Sbjct: 1328 ICEDGSGQLATHRGYSPTELTSCLYKVSDDSEPSTKGNLSIDVNYYLAHQIHPVVSRLVA 1387
Query: 1013 PIEGTDAVRIAECLGLDTSLY-RSQIKESIQQSEENILGVGEAEEV-KYQFCDKFEFTCM 1070
PIEGT RIA+CLGLD S Y RS + + + +EN +G + + C E +
Sbjct: 1388 PIEGTSPARIADCLGLDPSGYRRSNVTTVVDEDDENNPDIGFSSGFSSFTNCGDVESLYI 1447
Query: 1071 NPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH------LINKLSQDMNK 1124
N C + N P + T V P C + L + N+L + +
Sbjct: 1448 N--CPR-NCGGPPIAIKTSAFSVVGKTWFCPTCS---HNLLLSQDSARLVTNRLVFEARR 1501
Query: 1125 YIVKYYEGWLKCEDPGCSDLTR--RCPL-----------GLKTR----LCTTC-HKYKLH 1166
IV Y GW+ CEDP C+ +TR CP GL R LC C + L
Sbjct: 1502 LIVHYQLGWMTCEDPACAVVTRSLHCPPSSGHHTIGESDGLWARGGRPLCGVCGGQAALK 1561
Query: 1167 RVYTELQLYQQLSFFHYIC---DITKALTKSDTPSIKFDSETYMGYCKMKQHVERFLESS 1223
Y+E +LY+QL FF Y+ + A + +D I + + H +R L S
Sbjct: 1562 SNYSEAKLYRQLCFFRYLVTPPNNKNAGSNADM-EITLPPVVSSILSQCRNHFDRLLSHS 1620
Query: 1224 AYNIVDLKKLFS 1235
A+ +VDL KLFS
Sbjct: 1621 AFAMVDLGKLFS 1632
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 160/517 (30%), Positives = 251/517 (48%), Gaps = 62/517 (11%)
Query: 81 DENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIED------------ 128
++ VYE V E EY E V KR EDDWI DD G Y EDGREIFDD+ ED
Sbjct: 11 EQPVYETVDEAEYAELVRKRLEDDWIVDDEGGDYAEDGREIFDDNDEDEESYDSKPKAKS 70
Query: 129 ------VPQKKEKH-DKRKKNKNIQNPNAKGDIQKLLA---NMPVKKKKKEEVQLNNDDV 178
+P+KK + D R + P I+ L A KK+KE L+ D
Sbjct: 71 KMSSTSIPKKKRLNPDIRASDSAPLRPPVGRGIRSLFAASSGSNSSKKRKEMKDLSVDPN 130
Query: 179 LADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKK 238
L DLL+E+ +++ E P + K ++A+ K + +
Sbjct: 131 LDDLLAELESSV----------TEPKPHHHNPDNLSRKSFVAS-----KRNSGVHGNVVN 175
Query: 239 EPSPLKD----------EIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQT 288
P+PLK S + ++ + S + P+D + ++
Sbjct: 176 TPTPLKRRSPERPEQPIHTPSGSRLRLPLVSEKKHSSQTPLDQRSRNPFSCRELTGTEPK 235
Query: 289 QDVLPEQAKVELQIEAIESQSIEEKVDVTN------VESVSSAVELSTSPPPQV----VE 338
Q + + E+ S+ +VD TN +E + ++ + PP ++
Sbjct: 236 MKHSKPQVTGAISLPTEEATSMVSEVDETNFSEDFEMEMIPKNIQPAVQPPKSTSGSNMQ 295
Query: 339 KKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPG 398
A W + E T+ S P +++ N + ++ DA ED + PG
Sbjct: 296 STTSVTANWLTEENLAKADETTWIDETSPVSFPPSSNKGN--ILYFYWFDAHEDFKQLPG 353
Query: 399 TVYLFGKVF-VKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIAT 457
VYLFGK++ ++ +++SCC+ +++++R+I+LLPR+ + + ++ VY EF + +
Sbjct: 354 IVYLFGKLYDHSKSGTYASCCLRIKDLERRIFLLPRTSSPENGDIPTVKDVYMEFRDLTS 413
Query: 458 QYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSF 517
QYKI F+ + EK+YAF VP+ S+YLEVRY+A ALP+DL G TFSH+FGT +SF
Sbjct: 414 QYKIGKFRCKTTEKRYAFEYADVPETSDYLEVRYAASYSALPADLQGKTFSHIFGTNTSF 473
Query: 518 LENLLLERKIKGPSWLEFPEAEKFPSRISWCK--YEV 552
LENLLL+ +++GP WLE +A + +ISWC+ YEV
Sbjct: 474 LENLLLDLQLRGPCWLEIKDASQVQPQISWCQIDYEV 510
>gi|195995451|ref|XP_002107594.1| hypothetical protein TRIADDRAFT_49541 [Trichoplax adhaerens]
gi|190588370|gb|EDV28392.1| hypothetical protein TRIADDRAFT_49541 [Trichoplax adhaerens]
Length = 1203
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 300/687 (43%), Positives = 435/687 (63%), Gaps = 33/687 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE----A 615
++ITN+ GNVLSRTL+GGRSERNEFLLLHAF EK +V PDK + K ++ EE + A
Sbjct: 528 LQITNIVGNVLSRTLLGGRSERNEFLLLHAFSEKDFVCPDKSFKKKQQFNEEFEDHDDAA 587
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML---Q 672
RKK AYSGGLVLEPKKGFYDK+I+L+DFNSLYP+IIQE+NIC TT+ L +
Sbjct: 588 KSNNRRKKPAYSGGLVLEPKKGFYDKYILLLDFNSLYPTIIQEFNICLTTVDRHHLAADE 647
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKAL-MKQPNLSSDLLMQYDIRQKAL 731
++D CEY P ++ G+LP +K LVE RR+ L ++ L L++QYDIRQKAL
Sbjct: 648 NNDNELECEY-PSPDLEPGVLPLILKGLVERRREYGHLYLRLIFLIHRLVLQYDIRQKAL 706
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMI 790
KLTANS+YGCLGF NSRF+A+PLAALVT+KGREIL K LVEN + EVIYGDTDS+MI
Sbjct: 707 KLTANSLYGCLGFSNSRFYAKPLAALVTSKGREILTKAKELVENQMLLEVIYGDTDSIMI 766
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ N + D + +G+++K+E NK ++ LE+DIDGV+K MLLLKKKKYAAL+I K +G +
Sbjct: 767 NTNSTNLDEAYNLGHKVKAEINKSHRLLEIDIDGVFKSMLLLKKKKYAALAIQKNEDGTL 826
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
+E+KG+D+VRRDW QLA + G + +SQIL S ++ + IH ++ ++ D+
Sbjct: 827 SEVKELKGLDIVRRDWCQLAKDVGNYALSQILSSDSR-----ENIVDKIHSYLTEVGDDV 881
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
+G + + I K L+K+P +Y D+K+LPH+ VAL + T +++++ GD + Y+IC+DG
Sbjct: 882 RSGRIDIDKYVILKTLSKSPNDYPDKKSLPHIHVALWM-QTENRRVQIGDAVPYVICDDG 940
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
+ QRA++ ++ + + LKID YYL+ QIHPVV+RL +PIEGTD+ RIA+CLGLD
Sbjct: 941 SQLNVAQRAFHPDQFRRSDSLKIDFKYYLAYQIHPVVSRLCDPIEGTDSARIADCLGLDG 1000
Query: 1031 SLYRSQIKESIQQSEENILG-VGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTH 1089
S Y+ + + Q + +LG + + E +++ + + +C P CK +T
Sbjct: 1001 SQYKHKSYSAEQNESDAMLGDMHMSLEEQFKNVEPLKISC--PKCKVTEDFAGAYNKTTK 1058
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCP 1149
V C N V + NK+ ++ K+I YY+ W++C+DP C R+ P
Sbjct: 1059 QSGLVCPHC-NSNYNVVT------IQNKVVSEIRKFIKTYYQNWMQCDDPSCDYKMRQAP 1111
Query: 1150 LGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYM 1207
+ R C C + L Y+E LY Q+ ++ ++ DI + I+ D
Sbjct: 1112 YFISGRTIRCPACERGHLTLTYSEKSLYNQILYYQHLFDIDQI-----EKGIRIDQNIKA 1166
Query: 1208 GYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ + V + + + Y+ ++L KLF
Sbjct: 1167 DFKNLYGTVNKIISRNGYSEINLSKLF 1193
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 140/241 (58%), Gaps = 28/241 (11%)
Query: 379 KKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK 438
+K F+ DA+ED Q G +YLFGKV KEN +++SCC+IV+NI+R IY+LPR L
Sbjct: 132 EKYIDFFWFDAYEDPSLQKGIIYLFGKVKTKEN-AYASCCLIVKNIERDIYILPRKTRLD 190
Query: 439 TKEP-----VSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
T V++ VY EF +I + KI+ F+SR +K+YAF L VP SEYL V+YSA
Sbjct: 191 TDGSDSGIEVTMKDVYEEFSEICNKNKIMTFRSRVTKKRYAFELKDVPVESEYLHVKYSA 250
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWCKYEV 552
P + SD+ G TFSHVFGT +S LE+ LL KI GP+WL + FPS ++S+C+ E
Sbjct: 251 ALPQIKSDMQGQTFSHVFGTNTSSLESFLLHNKIMGPNWLRIRNPQ-FPSQKVSYCRSET 309
Query: 553 QCNQMEKIRITNVCGNVLS---RTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
+LS +T++ ++ NE + + A +S+ DK K+ EG
Sbjct: 310 ----------------ILSFSMKTIINPKTHENEIVAIAAVTHQSFYF-DKPPPKSLFEG 352
Query: 610 E 610
Sbjct: 353 H 353
>gi|358340495|dbj|GAA34876.2| DNA polymerase alpha subunit A [Clonorchis sinensis]
Length = 3307
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 323/808 (39%), Positives = 433/808 (53%), Gaps = 150/808 (18%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKG- 618
++IT +CGNVLSRTL GGR+ERNE LLLHAF + Y++PD N + G T A +
Sbjct: 877 MQITCICGNVLSRTLSGGRAERNEALLLHAFTQHGYIVPDPP--TNARRGRGTHAAGQDD 934
Query: 619 ---------------KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
G++K AY+GGLVLEPKKGFYDK+I+L+DFNSLYPSIIQE+NICF
Sbjct: 935 WDVVEHGDETQPAALTGKRKPAYTGGLVLEPKKGFYDKYILLLDFNSLYPSIIQEFNICF 994
Query: 664 TTIPVRMLQDSDI------------------------------------TTLCE------ 681
TT+ ++ SD TT+ +
Sbjct: 995 TTVNRELVTGSDSNPTDSTDVEAPHSETADLDVMVASLLATVQGTAGGSTTVTDPRSHQL 1054
Query: 682 YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL----LMQYDIRQKALKLTANS 737
LP Q G+LP+EI++LV+SRR+VK L+ + SS+ L Q++ RQ ALKLTANS
Sbjct: 1055 RLPTAQT-PGLLPAEIRRLVDSRREVKKLIAVASNSSNPDQAQLAQWNTRQAALKLTANS 1113
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
+YGCLGF SRF A+ LAALVT GR +L+NT+ LVEN+N+EVIYGDTDS+M++ N D
Sbjct: 1114 VYGCLGFAASRFCARGLAALVTGLGRAVLMNTRDLVENMNFEVIYGDTDSIMVNTNSTDL 1173
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK------------- 844
+ IG +++ E NK Y+ LELD DGVY MLLL KKKYAAL+I
Sbjct: 1174 LTALSIGEKVRHEVNKHYRLLELDTDGVYAAMLLLAKKKYAALAIQNPIQWAAAFKAAQA 1233
Query: 845 -----LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNI 899
L K QE+KG+D+VRRDWS +A G+ ++ +L + D L+ I
Sbjct: 1234 KHQPALPPPKT--KQEMKGLDIVRRDWSAIAVSVGRRCVAALLSGEPK-----DTILERI 1286
Query: 900 HEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS------ 953
H + + + G +PL+ ITK LTKAPE+Y D K+ PHVQVALRLNN++
Sbjct: 1287 HTDLIETAEKVREGKMPLSDFIITKMLTKAPEDYADAKSQPHVQVALRLNNSDGSKDGGA 1346
Query: 954 -KKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNS----------KLKIDVNYYLSQQ 1002
++L+ GDT+ YIIC DG+ ATQR Y+ EL N L +DVNYYL+ Q
Sbjct: 1347 RRRLRAGDTVEYIICNDGSGSVATQRGYSPGELTNRGMSKSADDQQPSLTVDVNYYLAHQ 1406
Query: 1003 IHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ-IKESIQQSEENI---LGVG-EAEEV 1057
IHPVV+RL+ PIEGT RIA+CLGLD S YR Q + + +ENI +G G A
Sbjct: 1407 IHPVVSRLVAPIEGTSPARIADCLGLDPSGYRRQGVDVAGGDEDENIDCTVGSGANAGVT 1466
Query: 1058 KYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDEC-------INPECKVPPYTY 1110
+ + C +C P+ L+ +V C ++ C +
Sbjct: 1467 AWGDVEPLYLPCPQ-TCGGPQLEIKPSSLTALSKAWVCPNCSHNLLQSVDSVCSI----- 1520
Query: 1111 LPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR--RCPL----------GLKTR--- 1155
+N+L+ + IV Y GWL CEDP C +TR CP GL R
Sbjct: 1521 ----VNQLTWQARQMIVCYELGWLHCEDPACGLVTRSIHCPPSTVGVHGDSDGLWARGGR 1576
Query: 1156 -LCTTCHKYKLHRV-YTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMK 1213
LC C L + Y E +LY+QL FF ++ + T L + D + +
Sbjct: 1577 PLCPGCGGQALLKPHYAESRLYRQLCFFRHLVNETSKLASESYTNSAIDRLLHQAHA--- 1633
Query: 1214 QHVERFLESSAYNIVDLKKLFSCEEKQP 1241
H +R L SA+ +VDL++LFS P
Sbjct: 1634 -HFDRLLSHSAFAMVDLRQLFSGLRTNP 1660
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 258/534 (48%), Gaps = 85/534 (15%)
Query: 81 DENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIED-----------V 129
+E+VY V E EY + V +R EDDWI DD G GY +DGREIFDD+ ED
Sbjct: 35 EESVYVTVDESEYAKLVQQRLEDDWIVDDDGLGYADDGREIFDDNDEDEAVDDRGRRTKR 94
Query: 130 PQKKEKHDKRKK-NKNIQ-------NPNAKGDIQKLLANMPVK----KKKKEEVQLNNDD 177
K + H K+ + N +I+ P DI+ L A + KK+KE ++ D
Sbjct: 95 SSKTQSHSKKTRLNPDIRATESAPLRPVVGRDIRSLFAASSAQNSSTKKRKEPMEATIDP 154
Query: 178 VLADLLSEVNTT--------IAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVE 229
L DLL+E+ IAP+L TK +++ + P P ++ ++
Sbjct: 155 NLDDLLAELECNDSVPGRRDIAPSLSRPTKPHKVKSRRTVPSQPFQSSEEDQIAEELENS 214
Query: 230 KKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDD--GLWEQMQIDDWDNSQQ 287
I+ +EP K ++ V E +++P+ D L + + + +Q
Sbjct: 215 DVIDLRSHREPMIKKHSTRTP---------VVEAKQKKPIPDVGHLPKPRVTNPFSTEKQ 265
Query: 288 TQDVLPEQAKVELQIEAIESQS-------IEEKVDVTNVESVSSAVELSTSPPPQVVE-- 338
+ P A + A + S E +V V + E + S+ P P+ +
Sbjct: 266 PR---PRAAPAATETVADNTASPEPDTVMAEMEVSVADFEDDFDVPDESSKPKPEPISQP 322
Query: 339 ---------KKEHKCAEWEAIQTEPS--------TSEPQVHSRTADDSLPLATDHENKKV 381
K + W A ++E S E S TADD L
Sbjct: 323 TSDELVKAIKPDQPSIGWLAAESEASKLMEDSDWNDELTTTSVTADDGL----------- 371
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVF-VKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTK 440
++ DA+ED QPG VYLFGK+ + SCC+ V++++R+I+LLPR E
Sbjct: 372 -HFYWFDAYEDSRHQPGVVYLFGKIKDSQRPGKFISCCLRVKDLERRIFLLPRPELTDGA 430
Query: 441 EPVS-IAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALP 499
E S + +VY+EF Q++ ++K+ F+ + K+YAF+L VP SEYLEVRYSA CPALP
Sbjct: 431 ESGSFMKEVYTEFRQVSAEHKVGRFRCKLSTKRYAFDLADVPVESEYLEVRYSASCPALP 490
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQ 553
+DL G TFSH+FGT +SFLENL+LE +++GP WL A +ISWC+ + +
Sbjct: 491 ADLQGKTFSHIFGTNTSFLENLILELQLRGPCWLVVKNAALVQPQISWCQTDFE 544
>gi|326432781|gb|EGD78351.1| hypothetical protein PTSG_09417 [Salpingoeca sp. ATCC 50818]
Length = 1535
Score = 524 bits (1350), Expect = e-145, Method: Compositional matrix adjust.
Identities = 309/695 (44%), Positives = 420/695 (60%), Gaps = 36/695 (5%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPD---KQYGKNKKEGEETGEANK 617
+ITN+ G ++SRTL GRS+RNEFLL H FH + Y++PD + GKNKK+ ++ G+ +
Sbjct: 853 QITNITGGLMSRTLTRGRSDRNEFLLCHEFHRRKYIVPDVPERNSGKNKKDSDDGGDGKE 912
Query: 618 -GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
R+K Y+GGLVLEPK+GFYD +I+L+DFNSLYPSIIQEYN+CFTT+ L D
Sbjct: 913 SASSRRKPKYAGGLVLEPKRGFYDNYILLLDFNSLYPSIIQEYNLCFTTVKRDHLSDDME 972
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
+ E +P+ D GILP +K L+ R+QVKAL+K + L +YDIRQKALKLTAN
Sbjct: 973 DSFAE-IPDETADKGILPRILKTLIAKRKQVKALIKA-ETNPARLAEYDIRQKALKLTAN 1030
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNVN 795
SMYGCLGF SRF+A+P+A L+T KGREIL NT L +N +N +VIYGDTDS+MI+
Sbjct: 1031 SMYGCLGFVGSRFYAKPIAELITTKGREILQNTVDLAQNKMNLDVIYGDTDSIMINTRSR 1090
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQE 855
DY +IG+++K E N LY++LE+DIDGVYK MLLLKKKKYAAL+I + +G +E
Sbjct: 1091 DYKETRQIGHRVKKEVNALYRELEIDIDGVYKTMLLLKKKKYAALTIVENKDGTFRTERE 1150
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFV 915
KG+D+VRRDW LA G ++++IL ++ D ++ HE + K+ G +
Sbjct: 1151 TKGLDIVRRDWCGLAHRIGNIILNKILTQEQ---GQRDKLVEECHEELHKVGESAREGTI 1207
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA 975
PL I K LTK P +Y D K PHVQVALR+ N K +KQ DTI YIIC DG+ A
Sbjct: 1208 PLEEYIIHKSLTKDPNQYPDAKNQPHVQVALRM-RANGKSIKQHDTIPYIICNDGSELPA 1266
Query: 976 TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRS 1035
TQRAY+ ++++ L++DV+YYL Q+HPVV+R+LEPIEGTD ++AECLGLD S +R
Sbjct: 1267 TQRAYHPDDVRKKDNLQVDVDYYLKSQVHPVVSRMLEPIEGTDNAQVAECLGLDASSFR- 1325
Query: 1036 QIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNP---SCKQVN---TVEAPTRLSTH 1089
+Q E L + + Q D+ F +P C+Q N T RLS
Sbjct: 1326 ------RQYEATDLDDDMSFSLSTQLTDEERFKTASPLTVVCRQCNHESTFAGVFRLSEQ 1379
Query: 1090 GVVFVLDECINPEC-KVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRC 1148
G V + +C N C + P YL N++S + K I +YY L C +P C T+
Sbjct: 1380 GDVRLGLQCANAGCTAMYPVNYLK---NRVSLEARKAIHEYYTCKLVCSEPECPRHTQGT 1436
Query: 1149 -PLGLKTRLCT--TCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSET 1205
L + C C + ++Y+E LY QLSFF ++ ++ A+ + + +T
Sbjct: 1437 HQLSVNGARCLEKRCQG-TMRKLYSERMLYTQLSFFAHLFNVPHAVQQLPEELQRIGQQT 1495
Query: 1206 YMGYCKMKQ----HVERFLESSAYNIVDLKKLFSC 1236
Y Q H E L SA V L +LF
Sbjct: 1496 ADQYRSQYQDAFVHAEALLNKSARRFVHLGQLFGA 1530
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 12/180 (6%)
Query: 343 KCAEWEAIQTEPSTSEPQVHSRT---ADDSLPLATDHENKKVFRMFFLDAFEDIY-KQPG 398
K E E T+P+ S V + D P D+E ++V ++LDA+E + + G
Sbjct: 392 KPMEIEEEATKPAWSSTPVDTHKDVKLDLKAPPLDDYEGEQVLHFYWLDAYELPFDNKSG 451
Query: 399 TVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR-----SEHLKTKEPVSIAQVYSEFD 453
VYLFGKVFV+ + + SCCV V+ ++R +++LPR ++ T E V + V+ E D
Sbjct: 452 AVYLFGKVFVESVSEYVSCCVTVRGLERNLFVLPREFKVDAQGNDTTEKVEMGDVFEEVD 511
Query: 454 QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGT 513
+ ++ I ++ +E+ YAF GVP +E+L+++Y A+ L S L ++V T
Sbjct: 512 TLLSRRGISTRLAKPVERNYAFEEKGVPANAEFLKIKYPAR---LGSSLVAHMHNNVHTT 568
>gi|167519929|ref|XP_001744304.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777390|gb|EDQ91007.1| predicted protein [Monosiga brevicollis MX1]
Length = 1089
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 302/649 (46%), Positives = 411/649 (63%), Gaps = 42/649 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK------QYGKNKKEGEETGE 614
+ITN+ G ++SRTL GRS+RNEFLL H FH + Y++PDK Q KN K+G++
Sbjct: 459 QITNITGGLMSRTLSRGRSDRNEFLLCHEFHRRKYIVPDKPTWAEKQAIKNSKQGKKADN 518
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ-- 672
R+K AYSGGLVLEPKKGFYDK I+L+DFNSLYPSIIQEYN+CFTT+ Q
Sbjct: 519 LADEPVRRKPAYSGGLVLEPKKGFYDKLILLLDFNSLYPSIIQEYNLCFTTVGRNDGQPK 578
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
S+ +P+ + G+LP ++ L+ RRQVKAL+K +S L +YDIRQKALK
Sbjct: 579 SSEEEDAIAEVPDSALPRGVLPHLLRTLIAKRRQVKALIKSEADASKL-AEYDIRQKALK 637
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMIS 791
LTANSMYGCLGF SRF+A+ +AALVT+KGREIL T L ++ L EVIYGDTDS+M++
Sbjct: 638 LTANSMYGCLGFTGSRFYAKAIAALVTSKGREILQKTVDLTQDKLGLEVIYGDTDSIMVN 697
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
DY + NQ+K E N LY +LE+D+DG+YK MLLLKKKKYAA + +S GK+
Sbjct: 698 SRCTDYSEAVTLANQVKKEVNSLYSELEIDLDGIYKTMLLLKKKKYAA-LMMDMSKGKVT 756
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
++E+KG+D+VRRDWS LA++AG ++++Q+L+++ + SL ++ HEH++++ D+
Sbjct: 757 LTKEVKGLDIVRRDWSALAADAGNWILNQVLNQEQDSTESL---VETCHEHLRQVSEDVR 813
Query: 912 N-GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
VPL I K LTK P Y D KALPHVQVALR+ K ++ DTI YI+CEDG
Sbjct: 814 TENKVPLEKFIIFKSLTKDPSAYGDAKALPHVQVALRMKAAG-KSVRMHDTIPYIVCEDG 872
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
TS ATQR Y+ +EL+ N LKID YYL Q+HPVV+RLLEPIEGTD V+IAECLGLDT
Sbjct: 873 TSNGATQRGYHPDELRKNEHLKIDYEYYLKSQVHPVVSRLLEPIEGTDNVKIAECLGLDT 932
Query: 1031 SLYRSQIKES-IQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTH 1089
+ ++ + + + +L ++E +++ + TC C + R+
Sbjct: 933 TTFKRAYEVTDVDTDMTMVLSTQLSDEERFKTAEPLTVTCRK--CGHRTDLPGVFRMK-D 989
Query: 1090 GVVFVLDECINPECKVPPYTYLP-HLINKLSQDMNKYIVKYYEGWLKCEDPGC------- 1141
GV C N EC ++ P +L N + + KYI +YY+ L C+D GC
Sbjct: 990 GVRQCGLLCPNAECTA---SFEPVYLSNLMQLEARKYIARYYDAALICDDAGCPRGHRET 1046
Query: 1142 ---SDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDI 1187
S L RRC L +C + L +VY++ QLY QL +F + D+
Sbjct: 1047 RDLSVLGRRC-------LDPSC-RGTLQQVYSDKQLYTQLCYFRNLFDV 1087
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 119/189 (62%), Gaps = 6/189 (3%)
Query: 370 LPLATDHENKKVFRMFFLDAFEDIYK-QPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKI 428
LPL T ++V M++LDAFE G++YLFGKV+ E+ ++ SCC+ V N++R I
Sbjct: 8 LPLDTLESGEEVLHMYWLDAFEVSRNCGDGSIYLFGKVYHPESETYISCCLTVANLERNI 67
Query: 429 YLLPRS-----EHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDL 483
+++PR E ++T E VS+A VY E QI ++YKI F S+ +++KYAF+ VP+
Sbjct: 68 FVVPRRLRLDREGVETNEAVSMADVYEEMGQIMSRYKINPFLSKPVKRKYAFDKTDVPEE 127
Query: 484 SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS 543
+ L+++YS PALP DLSG TFSHVFGT S LE L++R + GP WL +
Sbjct: 128 VDVLKIKYSGTLPALPGDLSGQTFSHVFGTNISPLERFLMKRDLMGPCWLRIKNVKGATK 187
Query: 544 RISWCKYEV 552
ISWCK E
Sbjct: 188 NISWCKLEA 196
>gi|341878909|gb|EGT34844.1| hypothetical protein CAEBREN_29139 [Caenorhabditis brenneri]
Length = 1534
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 317/723 (43%), Positives = 426/723 (58%), Gaps = 75/723 (10%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+I+ + G + SRT+MGGR+ERNE+LLLHAF + + PDK K+ +E GE N
Sbjct: 835 IQISQIVGGIASRTMMGGRAERNEYLLLHAFEKADLIAPDKYNAFENKKKKEQGEDNAEG 894
Query: 620 G-----RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
G KA YSGGLVLEPKKG Y+ I+L+DFNSLYPSIIQEYNIC+TT+ D
Sbjct: 895 GGDEKKNGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTTLEYSKDSDE 954
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
++ +P++ G+LP EI+KLVE RR VK LMK + Q DIRQ ALKLT
Sbjct: 955 QLS-----VPQNTDIEGVLPREIRKLVECRRNVKTLMKTERNDAKR-KQMDIRQMALKLT 1008
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF SRF+A+PLAALVTAKGREIL+++K LVE + Y V+YGDTDS+MI+ N
Sbjct: 1009 ANSMYGCLGFQYSRFYAKPLAALVTAKGREILMHSKDLVEKMGYSVVYGDTDSIMINTNS 1068
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
D + K+G++IK NK ++ LELD+DGV+K MLLLKKKKYAAL+I+ + + ++
Sbjct: 1069 MDLVAAKKLGSEIKKAVNKCHRLLELDLDGVFKRMLLLKKKKYAALTINPDTK---VEAK 1125
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E+KG+D+VRRDWSQLA E G V+ +ILD + D+ + I + ++ IR LD+G
Sbjct: 1126 ELKGLDIVRRDWSQLAKETGTAVVDKILD----ASLTRDEMISAIDDLLRDIRQKLDSGT 1181
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
VPL + +I+KQLT+ PE+Y+D KA H VA RLN + L+ D + Y+ICEDGT
Sbjct: 1182 VPLEMFQISKQLTRNPEQYSDVKAQSHAAVAQRLNKSGKFHLRHNDIVEYVICEDGTDNP 1241
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
ATQRAY+ E+ +N LKID+ YYL+QQIHPVV+RL+EPIE TDAVRIAECLGLD++ YR
Sbjct: 1242 ATQRAYHRTEMTDNKDLKIDLLYYLAQQIHPVVSRLVEPIEETDAVRIAECLGLDSTNYR 1301
Query: 1035 SQI----------KESIQQSEENILGVGEAEEV----KYQFCDKFEFTCMNPSCKQVNTV 1080
++ Q E L + V Y C+ C + C N +
Sbjct: 1302 RAAAAQASQRAAEEDCAWQQEVGFLSLSLRYLVYLFKNYDLCEGVIIVCPHAGCGHTNVI 1361
Query: 1081 EA-------PT--RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYE 1131
PT RLS G C E + + N++ + + +++ +++
Sbjct: 1362 RETFDCVTDPTCPRLSISG-------CSKCEGRWESAEDRAVIFNQIDRQLGEFVSRHHL 1414
Query: 1132 GWLKCEDPGCSDLTR-----RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICD 1186
KC++P C TR C GL+ C C L R YT QL+ Q FF I D
Sbjct: 1415 AAFKCDEPTCEFKTRVQTMKWCREGLE---CIRCSTGVLRREYTTKQLFDQQMFFRQIFD 1471
Query: 1187 ITKALTK-----------SDTPSIK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKK 1232
+ A K D P K DS ++ +K +L+ +AYN VDL
Sbjct: 1472 VEAACKKLSELQRKTAENRDRPQFKAYIMDSMEFVERINVK-----YLQKNAYNRVDLAY 1526
Query: 1233 LFS 1235
+F+
Sbjct: 1527 IFA 1529
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 141/290 (48%), Gaps = 64/290 (22%)
Query: 330 TSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPL-------------ATDH 376
TSP VV ++E K E ++ E EP R DSL A D
Sbjct: 281 TSP---VVSQQEKKEIAKEPVKMEIDDDEPSERIREVGDSLAKFRVMEEAWTGSQEAGDE 337
Query: 377 ENKKV---------------------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHS 415
E++K+ RM+++DA+ED++K GTVYLFGKV N S
Sbjct: 338 EDEKMEVKTGSEPFYVMGGNGIDTNAIRMYWIDAYEDVHKANGTVYLFGKVKTSAN-SWG 396
Query: 416 SCCVIVQNIDRKIYLLPRS----------------EHLKTKEPVSIAQVYSEF-DQIATQ 458
+C +IV+NI RK+Y +PRS ++LKT E S+A+++ E D + +
Sbjct: 397 TCSIIVKNICRKVYFMPRSHVSQSQSNITRKYSFFQNLKTGEETSLAELHKEIGDVLKNK 456
Query: 459 YKILDFKSRKIEKKY----AFNLPGVPDLSEYLEVRY---SAKCPALPSDLSGDTFSHVF 511
+ +FK + +EK+ +F G + +EV Y A LPSDL GD+FSH F
Sbjct: 457 FHTQEFKCKMVEKELIRDESFGNGGGTK-TPLMEVLYPVGKADKGKLPSDLKGDSFSHTF 515
Query: 512 GTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
T S LE LL+E+K GP W+E ++ S C+YE + + MEK+R
Sbjct: 516 NTSVSPLERLLIEKKFMGPGWIELYNYSDPKAKTSNCQYEFEVD-MEKMR 564
>gi|392896659|ref|NP_001255109.1| Protein Y47D3A.29, isoform a [Caenorhabditis elegans]
gi|25005148|emb|CAB97239.2| Protein Y47D3A.29, isoform a [Caenorhabditis elegans]
Length = 1428
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 312/694 (44%), Positives = 426/694 (61%), Gaps = 40/694 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+I+ + G + SRT+MGGR+ERNE+LLLHAF + + PDK K+ +E + K
Sbjct: 751 IQISQIVGGIASRTMMGGRAERNEYLLLHAFEKADLIAPDKYNSSESKKKKEESQEGDEK 810
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
KA YSGGLVLEPKKG Y+ I+L+DFNSLYPSIIQEYNIC+TT+ D ++
Sbjct: 811 KSGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTTLEYSKDSDEQLS-- 868
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P+ G+LP EI+KLVE RR VK+LMK + Q DIRQ ALKLTANSMY
Sbjct: 869 ---VPQSTDIEGVLPREIRKLVECRRDVKSLMKSERNEAKK-KQMDIRQMALKLTANSMY 924
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLGF SRF+A+PLAALVTAKGREIL+++K LVE + Y V+YGDTDS+MI+ N D +
Sbjct: 925 GCLGFQYSRFYAKPLAALVTAKGREILMHSKDLVEKMGYSVVYGDTDSIMINTNSVDLVA 984
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
K+GN+IK NK ++ LELD+DGV+K MLLLKKKKYAAL+I+ + + ++E+KG+
Sbjct: 985 AKKLGNEIKKAVNKCHRLLELDLDGVFKRMLLLKKKKYAALTINPDTK---VEAKELKGL 1041
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDWSQLA E G V+ +ILD + D+ + +I + +++IR LD+G VPL +
Sbjct: 1042 DIVRRDWSQLAKETGTAVVDKILD----ASLTRDEMVSSIDDLLREIRAKLDSGTVPLEM 1097
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
+I+KQLT+ PE+Y D KA H VA RLN + L+ D + Y+ICEDGT ATQRA
Sbjct: 1098 FQISKQLTRNPEQYADVKAQCHAAVAQRLNKSGKFNLRHNDIVEYVICEDGTDNPATQRA 1157
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY--RSQI 1037
Y+ E+ NS LKID+ YYL+QQIHPVV+RL+EPIE TDAVRIAE LGLD++ Y +
Sbjct: 1158 YHRTEMAENSALKIDLLYYLAQQIHPVVSRLVEPIEETDAVRIAENLGLDSTNYRRAAAA 1217
Query: 1038 KESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVN----TVEAPTRLSTHGVVF 1093
+ S + +EE+ E Y C+ C C N T + T S+ ++F
Sbjct: 1218 QASQRAAEEDCAWHQE----NYDLCEGIHVICPLDGCGHSNVIRETFDCVTDASSPRLLF 1273
Query: 1094 VLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-----RC 1148
C + + + N++ + M++++ +++ KC++P C TR C
Sbjct: 1274 --SGCAQCQGSWDLQEHQAVIGNQVDRQMSEFVARHHLAAFKCDEPTCEFKTRVQTMKWC 1331
Query: 1149 PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK-SDTPSIKFDSETYM 1207
GL+ C C L R YT QL+ Q FF I D+ A+ K SD
Sbjct: 1332 REGLE---CIRCSTGVLRREYTSKQLFDQQMFFRTILDVDAAVRKLSDAQKKAAKVRVEY 1388
Query: 1208 GYCKMKQHV------ERFLESSAYNIVDLKKLFS 1235
CK+ + E++LE +AYN VDL +F+
Sbjct: 1389 NGCKIDSMMLADRINEKYLEKNAYNRVDLSYIFA 1422
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 128/222 (57%), Gaps = 9/222 (4%)
Query: 346 EWEAIQTEPSTSEPQVHSRTADDSL-PLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFG 404
+W + + +V +T ++ + + K RM+++DA+ED++K GTVYLFG
Sbjct: 289 DWTGGSSSQEDEDVKVEVKTGSEAFYTMGGEDNTTKAIRMYWIDAYEDVHKANGTVYLFG 348
Query: 405 KVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEF-DQIATQYKILD 463
KV N+ +C ++V+NI RK+Y +PR+++L T E S+A+++ E D + ++ +
Sbjct: 349 KVKTS-GNAWETCSIVVKNICRKVYFMPRTKNLSTGEESSLAELHKEIGDVLRNKFNTHE 407
Query: 464 FKSRKIEKKY----AFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLE 519
FK + +EK+ +F G S +EV Y A+ LPSDL GDTFS+ F T + LE
Sbjct: 408 FKCKMVEKELIRDESFGY-GCGTKSPLMEVLYPAEKGKLPSDLKGDTFSNTFNTSVTPLE 466
Query: 520 NLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
LL+E+K GP W+E ++ S CKYE + + MEK+R
Sbjct: 467 RLLIEKKFMGPGWIELYNYSDPKAKTSNCKYEFEVD-MEKMR 507
>gi|308497768|ref|XP_003111071.1| hypothetical protein CRE_04677 [Caenorhabditis remanei]
gi|308242951|gb|EFO86903.1| hypothetical protein CRE_04677 [Caenorhabditis remanei]
Length = 1489
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 306/716 (42%), Positives = 437/716 (61%), Gaps = 61/716 (8%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG-----KNKKEGEETGE 614
++I+ + G + SRT+MGGR+ERNE+LLLHAF + + PDK K ++E E+ E
Sbjct: 790 LQISQIVGGITSRTMMGGRAERNEYLLLHAFEKADLIAPDKYNSFDAKKKKEQESEDNAE 849
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ K KA YSGGLVLEPKKG Y+ I+L+DFNSLYPSIIQEYNIC+TT+ D
Sbjct: 850 VTEEKKSGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTTLEYAKDSDE 909
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
++ +P++ G+LP EI+KLVE RR VK LMK + Q DIRQ ALKLT
Sbjct: 910 QLS-----VPQNTDIEGVLPREIRKLVECRRNVKGLMKTERNEAKR-KQLDIRQMALKLT 963
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF SRF+A+PLAALVTAKGREIL+++K LVE + Y V+YGDTDS+MI+ N
Sbjct: 964 ANSMYGCLGFQYSRFYAKPLAALVTAKGREILMHSKDLVEKMGYSVVYGDTDSIMINTNS 1023
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
D + K+G++IK NK ++ LELD+DGV+K MLLLKKKKYAAL+I+ + + ++
Sbjct: 1024 VDLGAAKKLGSEIKKAVNKCHRLLELDLDGVFKRMLLLKKKKYAALTINPDTR---VEAK 1080
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E+KG+D+VRRDWSQLA E G V+ +ILD T + D+ + +I + +K+IR LD+G
Sbjct: 1081 ELKGLDIVRRDWSQLAKETGTAVVDKILD----TSLTRDEMISSIDDLLKEIRQKLDSGT 1136
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
+PL + +I+KQLT+ PE+Y+D KA H VA RLN + + D + Y+IC+DG+ +
Sbjct: 1137 IPLEMFQISKQLTRNPEQYSDVKAQSHAAVAQRLNKSGKFHFRHNDIVEYVICDDGSDNS 1196
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
ATQRAY+ E+ +N LKID+ YYL+QQIHPVV+RL+EPIE TDAVRIAE LGLD++ Y+
Sbjct: 1197 ATQRAYHRTEMTDNKDLKIDLLYYLAQQIHPVVSRLVEPIEETDAVRIAESLGLDSANYK 1256
Query: 1035 --SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV 1092
+ + S + +EE+ E+ Y+ C+ C C + N + +T
Sbjct: 1257 RAAAAQASQRAAEEDCTWQQES----YELCEGVIVICPYAECGETNVIRETFDSTTDPTC 1312
Query: 1093 --FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR---- 1146
+L C + + + N++ + + +++ +++ +C++P C TR
Sbjct: 1313 PRLLLSGCSKCDKSWESSEHQAVIFNQIDRQLGEFVSRHHAAAFRCDEPTCEFKTRVQTM 1372
Query: 1147 -RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK-SDTPSIKFDSE 1204
C GL+ C C L R YT QL+ Q FF I D+ A+ K SD+ K E
Sbjct: 1373 KWCREGLE---CVRCSTGVLRREYTSKQLFDQQMFFRQIFDVETAIRKLSDSQKSKI-FE 1428
Query: 1205 TYMGY-------------------CKM------KQHVERFLESSAYNIVDLKKLFS 1235
MG+ C++ + +++LE ++YN VDL +F+
Sbjct: 1429 LIMGFYIFSFPGASENSDRQRFTACRIDSMEIVNRITKKYLERNSYNRVDLSYIFA 1484
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 119/195 (61%), Gaps = 8/195 (4%)
Query: 372 LATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLL 431
++ + E+ K RM+++DA+ED++K GTVYLFG+V S SC ++V+NI RK+Y +
Sbjct: 344 MSGESEDTKAIRMYWIDAYEDVHKANGTVYLFGRVKASAT-SWESCSIVVKNICRKVYFM 402
Query: 432 PRSEHLKTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKY----AFNLPGVPDLSEY 486
PRS +L+T E ++A+++ E D + ++ +FK + +EK+ +F G +
Sbjct: 403 PRSHNLRTGEESNLAELHKEIGDVLKNKFNTHEFKCKMVEKELIRDESFGNGGGTK-TPL 461
Query: 487 LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRIS 546
+EV Y A LPSDL G+TFSH F T + LE LL+E+K GP W+E K + +
Sbjct: 462 MEVLYPADKGKLPSDLRGNTFSHTFNTSVTPLERLLIEKKFMGPGWIELYNYAKPKAPTT 521
Query: 547 WCKYEVQCNQMEKIR 561
CK+E + + MEK+R
Sbjct: 522 NCKHEFEVD-MEKMR 535
>gi|268572495|ref|XP_002641336.1| Hypothetical protein CBG13184 [Caenorhabditis briggsae]
Length = 1461
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 311/710 (43%), Positives = 429/710 (60%), Gaps = 55/710 (7%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG-KNKKEGEE-TGEANK 617
++I+ + G + SRT+MGGR+ERNE+LLLHAF + + PDK +NKK+ E+ E
Sbjct: 768 MQISQIVGGITSRTMMGGRAERNEYLLLHAFEKADLIAPDKYSAFENKKQKEQQVKEEGD 827
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
K KA YSGGLVLEPKKG Y+ I+L+DFNSLYPSIIQEYNIC+TT+ D ++
Sbjct: 828 EKKAGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTTLVYSKDSDEQLS 887
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
+P++ G+LP EI+KLVE RR VKALMK S Q DIRQ ALKLTANS
Sbjct: 888 -----VPQNTDVEGVLPREIRKLVECRRDVKALMKTERNESKR-KQMDIRQMALKLTANS 941
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
MYGCLGF SRF+A+PLAALVTAKGREIL+++K LVE + Y V+YGDTDS+MI+ N D
Sbjct: 942 MYGCLGFQYSRFYAKPLAALVTAKGREILMHSKDLVEKMGYSVVYGDTDSIMINTNSMDL 1001
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
K+G++IK NK ++ LELD+DGV+K MLLLKKKKYAAL+I+ + + ++E+K
Sbjct: 1002 AMAKKLGSEIKKAVNKCHRLLELDLDGVFKRMLLLKKKKYAALTINPDTK---VEAKELK 1058
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+D+VRRDWSQLA E G V+ +ILD + S D+ + +I + ++ IR LD+G VP+
Sbjct: 1059 GLDIVRRDWSQLAKEIGTAVVDKILD----SSLSRDEMISSIDDLLRDIRQKLDSGTVPI 1114
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQ 977
+ +I+KQLTK P++Y D KA H VA RLN + ++ D + Y+ICEDGT ATQ
Sbjct: 1115 EMFQISKQLTKNPDQYGDVKAQSHAAVAQRLNKSGKFHMRHNDIVEYVICEDGTDNGATQ 1174
Query: 978 RAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY--RS 1035
RAY+ E+ +N LKID+ YYL+QQIHPVV+RL+EPIE TDAVRIAECLGLD++ Y +
Sbjct: 1175 RAYHRTEMVDNKDLKIDLLYYLAQQIHPVVSRLVEPIEETDAVRIAECLGLDSTNYRRAA 1234
Query: 1036 QIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV--F 1093
+ + + +EE+ E Y+ C+ C +P C N + T F
Sbjct: 1235 AAQANQRAAEEDCTWQQE----NYELCEGVVVVCPHPECGHSNVIRETFDCVTDPTSPRF 1290
Query: 1094 VLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-----RC 1148
++ C + + N++ + +++ +++ KC++P C TR C
Sbjct: 1291 LIAGCSQCNGTWESSEHQAVISNQIDCQLGEFVARHHIAAYKCDEPTCEFKTRVQTMKWC 1350
Query: 1149 PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYM- 1207
GL+ C C L R YT QL+ Q FF I D+ AL K +F YM
Sbjct: 1351 REGLE---CIRCSTGVLRREYTSKQLFDQQMFFRQIFDVDAALRKMSDSQKEF-VRRYML 1406
Query: 1208 ----------------GYCKM------KQHVERFLESSAYNIVDLKKLFS 1235
C++ + E++LE ++YN VDL +F+
Sbjct: 1407 RLKFPGAAENRDRQQFNACRIDSMDIVNRINEKYLERNSYNRVDLSYIFA 1456
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 129/221 (58%), Gaps = 9/221 (4%)
Query: 347 WEAIQTEPSTSEPQVHSRTADDSLPLAT-DHENKKVFRMFFLDAFEDIYKQPGTVYLFGK 405
W + + + +V +T + + T D E+ K RM+++DA+ED++K GTVYLFGK
Sbjct: 307 WTGNEDQEEEEDGKVEVKTGTEPFYVMTGDREDVKAIRMYWIDAYEDVHKANGTVYLFGK 366
Query: 406 VFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQI-ATQYKILDF 464
V N + +C ++V+NI RK+Y +PRSE+L+T E ++A ++ E ++ ++ +F
Sbjct: 367 VKTGAN-TWETCSIVVKNICRKVYFMPRSENLRTGEESNLADLHKEIGEVLKNKFNTHEF 425
Query: 465 KSRKIEKKY----AFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLEN 520
K + +EK+ +F G + +EV Y A LP+DL GDTFSH F T S LE
Sbjct: 426 KCKMVEKELIRDESFGNGGGTK-TPLMEVLYPADKGKLPNDLKGDTFSHTFNTSVSPLER 484
Query: 521 LLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
LL+E+K GP W++ ++ S CKYE + + MEK+R
Sbjct: 485 LLIEKKFMGPGWIDLYSYVDPKAKTSNCKYEFEVD-MEKMR 524
>gi|345494591|ref|XP_001604814.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Nasonia
vitripennis]
Length = 1738
Score = 514 bits (1325), Expect = e-142, Method: Compositional matrix adjust.
Identities = 290/681 (42%), Positives = 427/681 (62%), Gaps = 38/681 (5%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++IT + GN LSRTL G ERNEFLLLHAF K+Y+ PDK+ + +G
Sbjct: 1075 VQITRIVGNTLSRTLSCGVGERNEFLLLHAFQSKNYLTPDKRKDNSDYDG---------- 1124
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
+KK++Y+GG++LEPK GFYD ++L+DFNSLYPSIIQE+NICFTTIP + + L
Sbjct: 1125 -KKKSSYTGGMILEPKAGFYDTSVLLLDFNSLYPSIIQEFNICFTTIP--GAAHASVDEL 1181
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
C E + GILP+ I LV+SR Q+K ++ PNLSSDL QY+ RQ ALKLTANSMY
Sbjct: 1182 CRV--ESCAEQGILPTIISGLVQSRLQIKKMINSPNLSSDLRRQYNSRQLALKLTANSMY 1239
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG SRF+A+ LAALV +GREI T+ L+++ NYEVIYGDTDS MI+ + DY+
Sbjct: 1240 GCLGASYSRFYAKGLAALVAMRGREIFKKTQDLIQSHNYEVIYGDTDSFMINVKLTDYEQ 1299
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
V +G +K E NKL+K++++DID V+K +LL+KKK+YA L I++ SN ++ +EIKG+
Sbjct: 1300 VMAVGRMLKKEVNKLFKKIKIDIDRVFKCLLLMKKKQYAGLIITRQSNDELEYKKEIKGL 1359
Query: 860 DVVRRDWSQLASEAGKFVISQIL-DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+++RRD LAS+ G V+ ++L D+ S+ R +NI E ++ +L G +P++
Sbjct: 1360 EIIRRDCCALASDTGHKVLEELLKDQPSHI------RSKNIFEILETTNRELREGKLPMS 1413
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQR 978
LEITK+L+K P++Y ++ PHV VA RLN N++K K GD +SYIIC+D T+ +R
Sbjct: 1414 SLEITKKLSKDPDKYPNKNH-PHVIVAERLNKINARKWKAGDVVSYIICKDNTTRKPLER 1472
Query: 979 AYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIK 1038
AY+IEE K N ++KID YYL I P++ ++ +PIEG + V IA+ LG+ LY+ + K
Sbjct: 1473 AYHIEEFKTNEQIKIDETYYLMYHIFPIIHKICDPIEGIENVLIAQSLGI-ADLYKPK-K 1530
Query: 1039 ESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDEC 1098
S + + L + + + + C +F C + CK N ++ + G L C
Sbjct: 1531 ISDHRDAKMPLSLHDN---RNKNCVPLQFKCRD--CKTKNKIKTSVIHTKSGCQPSLATC 1585
Query: 1099 INPECKVPPYTYLPHLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL- 1156
N +C PP+ Y PH I N+L + + + KYY G ++C +P C + TR L L
Sbjct: 1586 TNSKCNTPPWKY-PHFIQNQLQLAIRECVNKYYTGAIECSNPLCCNSTRIIHLNSDDGLI 1644
Query: 1157 -CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS-DTPSIKFDSETYMGYCKMKQ 1214
C C + +R Y+E+ L+ QL+FF I + +A + D + + E Y G +++
Sbjct: 1645 KCYDCFDGRRYRKYSEIDLHNQLTFFVDIFTLDEAACQGLDVFTAQEVKEFYTG---LRE 1701
Query: 1215 HVERFLESSAYNIVDLKKLFS 1235
+ ++S+AY+IVDL +LF+
Sbjct: 1702 FMLDQIDSNAYSIVDLSRLFT 1722
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 125/214 (58%), Gaps = 6/214 (2%)
Query: 352 TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKEN 411
T+ PQV + LP T+ +K+FR F+LDA+ED Y PG V+LFGK+
Sbjct: 627 TDSKIISPQVERLSI---LPTTTNSYGQKIFRFFWLDAYEDSYTDPGVVFLFGKILEPTA 683
Query: 412 NSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEK 471
N + S CV V+NI R++Y+LPR + + E + + Y E ++ Q I +FK +K+ K
Sbjct: 684 NQYISSCVTVKNIPRRMYVLPRKD--EAGEQSAFDKAYVELNEYLRQKCINEFKCKKVTK 741
Query: 472 KYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPS 531
YAF VP + YLEVRYS+ PAL SD SG +FGT + +E L+E+ IKGP
Sbjct: 742 IYAFEKKDVPQNTAYLEVRYSSVYPALDSDYSGPAIQAIFGTNVTAMELFLIEKNIKGPC 801
Query: 532 WLEFPEAEKFPSRI-SWCKYEVQCNQMEKIRITN 564
W++ + S + SWCK+E+ C +ME I +TN
Sbjct: 802 WMDVKISPFASSNLSSWCKFEINCTRMEDISVTN 835
>gi|392896657|ref|NP_001255108.1| Protein Y47D3A.29, isoform b [Caenorhabditis elegans]
gi|257146921|emb|CBB16332.1| Protein Y47D3A.29, isoform b [Caenorhabditis elegans]
Length = 1456
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 316/723 (43%), Positives = 432/723 (59%), Gaps = 70/723 (9%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+I+ + G + SRT+MGGR+ERNE+LLLHAF + + PDK K+ +E + K
Sbjct: 751 IQISQIVGGIASRTMMGGRAERNEYLLLHAFEKADLIAPDKYNSSESKKKKEESQEGDEK 810
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
KA YSGGLVLEPKKG Y+ I+L+DFNSLYPSIIQEYNIC+TT+ D ++
Sbjct: 811 KSGKAQYSGGLVLEPKKGLYETLILLLDFNSLYPSIIQEYNICYTTLEYSKDSDEQLS-- 868
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P+ G+LP EI+KLVE RR VK+LMK + Q DIRQ ALKLTANSMY
Sbjct: 869 ---VPQSTDIEGVLPREIRKLVECRRDVKSLMKSERNEAKK-KQMDIRQMALKLTANSMY 924
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLGF SRF+A+PLAALVTAKGREIL+++K LVE + Y V+YGDTDS+MI+ N D +
Sbjct: 925 GCLGFQYSRFYAKPLAALVTAKGREILMHSKDLVEKMGYSVVYGDTDSIMINTNSVDLVA 984
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
K+GN+IK NK ++ LELD+DGV+K MLLLKKKKYAAL+I+ + + ++E+KG+
Sbjct: 985 AKKLGNEIKKAVNKCHRLLELDLDGVFKRMLLLKKKKYAALTINPDTK---VEAKELKGL 1041
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDWSQLA E G V+ +ILD + D+ + +I + +++IR LD+G VPL +
Sbjct: 1042 DIVRRDWSQLAKETGTAVVDKILD----ASLTRDEMVSSIDDLLREIRAKLDSGTVPLEM 1097
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRA 979
+I+KQLT+ PE+Y D KA H VA RLN + L+ D + Y+ICEDGT ATQRA
Sbjct: 1098 FQISKQLTRNPEQYADVKAQCHAAVAQRLNKSGKFNLRHNDIVEYVICEDGTDNPATQRA 1157
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY--RSQI 1037
Y+ E+ NS LKID+ YYL+QQIHPVV+RL+EPIE TDAVRIAE LGLD++ Y +
Sbjct: 1158 YHRTEMAENSALKIDLLYYLAQQIHPVVSRLVEPIEETDAVRIAENLGLDSTNYRRAAAA 1217
Query: 1038 KESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVN----TVEAPTRLSTHGVVF 1093
+ S + +EE+ E Y C+ C C N T + T S+ ++F
Sbjct: 1218 QASQRAAEEDCAWHQE----NYDLCEGIHVICPLDGCGHSNVIRETFDCVTDASSPRLLF 1273
Query: 1094 VLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-----RC 1148
C + + + N++ + M++++ +++ KC++P C TR C
Sbjct: 1274 --SGCAQCQGSWDLQEHQAVIGNQVDRQMSEFVARHHLAAFKCDEPTCEFKTRVQTMKWC 1331
Query: 1149 PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK-SDT----------- 1196
GL+ C C L R YT QL+ Q FF I D+ A+ K SD
Sbjct: 1332 REGLE---CIRCSTGVLRREYTSKQLFDQQMFFRTILDVDAAVRKLSDAQKSSCLRNFIG 1388
Query: 1197 -------PSIKFDSET-----------YMGYCKMKQHV------ERFLESSAYNIVDLKK 1232
+ KF + Y G CK+ + E++LE +AYN VDL
Sbjct: 1389 KKWEKSLENGKFRRNSAKNQAAKVRVEYNG-CKIDSMMLADRINEKYLEKNAYNRVDLSY 1447
Query: 1233 LFS 1235
+F+
Sbjct: 1448 IFA 1450
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 128/222 (57%), Gaps = 9/222 (4%)
Query: 346 EWEAIQTEPSTSEPQVHSRTADDSL-PLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFG 404
+W + + +V +T ++ + + K RM+++DA+ED++K GTVYLFG
Sbjct: 289 DWTGGSSSQEDEDVKVEVKTGSEAFYTMGGEDNTTKAIRMYWIDAYEDVHKANGTVYLFG 348
Query: 405 KVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEF-DQIATQYKILD 463
KV N+ +C ++V+NI RK+Y +PR+++L T E S+A+++ E D + ++ +
Sbjct: 349 KVKTS-GNAWETCSIVVKNICRKVYFMPRTKNLSTGEESSLAELHKEIGDVLRNKFNTHE 407
Query: 464 FKSRKIEKKY----AFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLE 519
FK + +EK+ +F G S +EV Y A+ LPSDL GDTFS+ F T + LE
Sbjct: 408 FKCKMVEKELIRDESFGY-GCGTKSPLMEVLYPAEKGKLPSDLKGDTFSNTFNTSVTPLE 466
Query: 520 NLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
LL+E+K GP W+E ++ S CKYE + + MEK+R
Sbjct: 467 RLLIEKKFMGPGWIELYNYSDPKAKTSNCKYEFEVD-MEKMR 507
>gi|302409208|ref|XP_003002438.1| DNA polymerase alpha catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261358471|gb|EEY20899.1| DNA polymerase alpha catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1231
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 413/1313 (31%), Positives = 637/1313 (48%), Gaps = 223/1313 (16%)
Query: 52 IDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKR-QEDDWIDD 108
+ KT++ A +LK L+ G K + D+ +YEEV E +Y + V R EDD++ D
Sbjct: 1 MGKTDRRAKLAELKALRQAGKKAFDNYQVDDINELYEEVDETQYKKIVRDRLNEDDFVVD 60
Query: 109 DGGDGYVEDGREIFD---------DDIEDVPQKKEKHDKRKKNKNIQNPNAK----GDIQ 155
D G+GY +DGRE +D D ED + + K K K + + DI
Sbjct: 61 DNGEGYADDGREEWDRVQQYHYASDSEEDGSGARGRPTKASKKKQADDAARREANDRDIS 120
Query: 156 KLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA 215
+ K + K + +DD LADLL EV+T + + +TK + +P
Sbjct: 121 TYFTSGAGKTQAKPK---EDDDFLADLLGEVDTNVPAPVPRSTKRHR---------SPDR 168
Query: 216 KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWE 275
++ + P E+ +P+ K S ++D+ S+ + ++ V + S DD L
Sbjct: 169 QQRRVRVASPPSHER--SQPLAKR-SKIRDDRPSSPPAAD-DILVDDNSVPTMDDDELPT 224
Query: 276 QMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA-VELSTSPPP 334
Q + D S V +A+++ + + + +E V + +V++A V ++ S PP
Sbjct: 225 QFPMSDPAPSSPAAKVAERKAQIKKEPDDDDDDMME----VAHAGTVTAASVNIAGSRPP 280
Query: 335 QVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADD---SLPLATDH--ENKKVFRMFFLDA 389
+ + K E A I + P E + +D +L + ++ E K + ++ + DA
Sbjct: 281 KKLIKPEPYPA---PITSSPVKQESAIDPSAWNDITNNLNIVSNSVSEVKSIRKIDYKDA 337
Query: 390 FE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK- 438
E D + G++ LFGKV K+ H SC V + NI RK++ LPR ++
Sbjct: 338 IEEDGSLNMFWTDYTEVSGSLCLFGKVLNKKTGQHVSCFVKIDNILRKLFFLPRETRVQG 397
Query: 439 ---TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKC 495
T + V + VYSE D + T+ KI +K++ ++ K L GV D S L + K
Sbjct: 398 GIDTCDEVGMVDVYSEVDALMTKMKIGKYKTKSLQPK----LEGV-DYSVLLNRIHEKKT 452
Query: 496 P-----------ALPSDLSGDTFSHVFGTKSSFLENLLLE--------RKIKGPSWL--- 533
P PS + G T +VF + LL + K SW
Sbjct: 453 PQWSRLGRLRRTVWPSSI-GKTGGNVFAERQVMSGRLLCDLANDAGKSAMYKCQSWSLTE 511
Query: 534 ----------EFPEAEKFPSRISWCKY------------------------EVQCNQMEK 559
E + + +W + +VQ + K
Sbjct: 512 MCSLYLSGNNHRRELDNDAALKTWASHSKEGFMDYVTHIEADTYFIAALALQVQLLPLTK 571
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK---QYGKNKKEGEETGEAN 616
+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK Q GK KE EE
Sbjct: 572 V-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQGFQRGKGAKEDEE----- 625
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
G +KK + GGLV +P+KG YDKF+++MDFNSLYPSIIQE+NICFTT+ + +
Sbjct: 626 -GDSKKKDKFKGGLVFDPEKGLYDKFVLVMDFNSLYPSIIQEFNICFTTVDRTAKLEDEE 684
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
+ + Q GILP I LV R+QVK+LMK + + L +DI+Q ALKLTAN
Sbjct: 685 EVPEVPVDQEQ---GILPKLIATLVSRRKQVKSLMKDKTATPEQLATWDIKQLALKLTAN 741
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
SMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ +VIYGDTDS+MI+ NV +
Sbjct: 742 SMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESRALQVIYGDTDSVMINANVEN 801
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
FK+G + K N+ Y+ LE+DID V++ +LL KKKYAA+++ + +NGK I E+
Sbjct: 802 VADAFKVGAEFKKAVNERYRLLEIDIDNVFRRILLQAKKKYAAINLVE-NNGKYIEKMEV 860
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
KG+D+ RR++ L+ E ++ +IL +
Sbjct: 861 KGLDMKRREYCGLSKEISGKLLDEILSGED------------------------------ 890
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG-TSEAA 975
+L K P+EY + +P VQVALR + K +++GD ISYII DG +SE A
Sbjct: 891 -------TELGKGPKEYRNGDTMPQVQVALR-DIARGKNVRKGDVISYIITGDGQSSEPA 942
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+RAY + LK S L DV +Y+++QI P V RL I GT +++AECLGLD Y
Sbjct: 943 PKRAYTPSDVLKPESGLAPDVEWYIAKQIFPPVERLCANIVGTSTMQLAECLGLDIKRYD 1002
Query: 1035 SQIK--ESIQQSEE-NILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA----PTRLS 1087
+ + + +++ E + L ++V++ C + C +CK+ + E PTR+S
Sbjct: 1003 TSRRRDDGVEKDMEVHPLESQIPDDVRFADCTRLSLRCR--TCKKSSVFEGLYSQPTRVS 1060
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
GV+ C + + P + ++ ++ + +YYEGWL C+D C TR
Sbjct: 1061 PAGVL-----CDHCGATISPLS----VVAQVEHAIRVQTARYYEGWLICDDSSCGIRTRQ 1111
Query: 1147 ------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA-------- 1190
RC P GL R C +Y+ Y+E +Y QL +F + D+ KA
Sbjct: 1112 MNVYGTRCLGPKGL-ARDCLGRMRYE----YSEKAIYNQLVYFTSLWDVDKARDKAVAAA 1166
Query: 1191 -------LTKSDTPSIKFDSE-TYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
L+++D +I +E + + +K VE++L+ V + LF+
Sbjct: 1167 APSSEEALSQADRENILALAEHNRVRFGTVKGVVEKYLDKCGRQWVAMDTLFA 1219
>gi|410056286|ref|XP_003317445.2| PREDICTED: DNA polymerase alpha catalytic subunit [Pan troglodytes]
Length = 1381
Score = 501 bits (1289), Expect = e-138, Method: Compositional matrix adjust.
Identities = 303/703 (43%), Positives = 406/703 (57%), Gaps = 95/703 (13%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKKEGEET----G 613
++ITN+ GN++SRTLMGGRSERNEFLLLHAF+E +Y++PDKQ + +K G+E G
Sbjct: 741 LQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDG 800
Query: 614 EANK-GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
+ NK KGRKKAAY+GGLVL+PK GFYDKFI+L+DFNSLYPSIIQE+NICFTT+
Sbjct: 801 DTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASE 860
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +D + + E LP+ ++ GILP EI+KL LM
Sbjct: 861 AQKVTEDGEQEQIPE-LPDPSLEMGILPREIRKLXXXXXXXXILMH-------------T 906
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
++ K+ +YG DTD
Sbjct: 907 KEMVQKMNLEVIYG-------------------------------------------DTD 923
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ N + + VFK+GN++KSE NKLYK LE+DIDGV+K +LLLKKKKYAAL + S
Sbjct: 924 SIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTS 983
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+G + QE+KG+D+VRRDW LA + G FVI QIL +QS D ++NI + + +I
Sbjct: 984 DGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSR-----DTIVENIQKRLIEI 1038
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ NG VP++ EI K LTK P++Y D+K+LPHV VAL +N+ +K+K GDT+SY+I
Sbjct: 1039 GENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVI 1098
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
C+DG++ A+QRAY E+L+ L ID YYL+QQIHPVV R+ EPI+G DAV IA L
Sbjct: 1099 CQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWL 1158
Query: 1027 GLDTSLYRSQIKESIQQSEEN--ILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVE 1081
GLD + +R + EEN +LG G A+ E KY+ P+C N +
Sbjct: 1159 GLDPTQFRVH---HYHKDEENDALLG-GPAQLTDEEKYR--XXXXXXXXXPTCGTENIYD 1212
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
S + L C N +CK P T+ L NKL D+ ++I KYY+GWL CE+P C
Sbjct: 1213 NVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTC 1272
Query: 1142 SDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR PL LC C K L Y++ LY QL F+ YI D AL K T
Sbjct: 1273 RNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHE 1332
Query: 1200 K-------FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 1333 KDKLKKQFFTPRVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFA 1375
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 284/583 (48%), Gaps = 88/583 (15%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 20 RARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDW 78
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLL 158
I DD G GYVEDGREIFDDD+ED ++ K K +N N K +I+ +
Sbjct: 79 IVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMF 138
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNT-----TIAPTLKLNTKTNEIVIPKEEPPAP 213
KK + V L+ DD+L D+L ++NT T P + LN K + P
Sbjct: 139 IACAGKKTADKAVDLSKDDLLGDILQDLNTEVNEITPPPVMILNIKRSIGASPNPFSVHT 198
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ P+ + E P+ P PLK + D +V +S EE + G
Sbjct: 199 ATAVPSGKIASPV---SRKEPPLT--PVPLKRAEFAGD-------DVQVESTEEEQESGA 246
Query: 274 WEQMQIDDWDNSQQTQ--DVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
E + D+D + + D+ P AK Q E+ ++ ++++ D S + S
Sbjct: 247 ME-FEDGDFDEPMEVEEVDLEPMAAKAWDQ-ESEPAEEVKQEAD-----SGKGTMSYLGS 299
Query: 332 PPPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
P V C W+ Q + S E QV S LPL + ++VF ++LD
Sbjct: 300 FLPDV------SC--WDIDQEGDSSFSVQEVQVDS----SHLPLVKGADEEQVFHFYWLD 347
Query: 389 AFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEP 442
A+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P
Sbjct: 348 AYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTP 407
Query: 443 VSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
+S+ VY EFD+ IAT+YKI+ FKS+ A+ P LP D
Sbjct: 408 ISMKDVYEEFDEKIATKYKIMKFKSK-------------------------AEMPQLPQD 442
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
L G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E + + +
Sbjct: 443 LKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVN 502
Query: 562 ITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ V +T+ ++ +NE + + A S+ L
Sbjct: 503 VIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFAL 545
>gi|391331432|ref|XP_003740150.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1500
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 292/708 (41%), Positives = 425/708 (60%), Gaps = 32/708 (4%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKKEGEETGEANKG 618
+IT +CGN L++TL GR+ RNE+LLLHAF K++++PDK+ + KK+ E E G
Sbjct: 795 QITTICGNTLTQTLQKGRALRNEYLLLHAFTSKNFIVPDKESRRAQKKKQQNEADEGKTG 854
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---IPVRMLQDSD 675
+K AYSGGLVL+P GFYD ++LMDFNSLYPSIIQEYN+CFTT P +
Sbjct: 855 DKKKGPAYSGGLVLDPIVGFYDSMVLLMDFNSLYPSIIQEYNLCFTTCALTPPEDNAAAA 914
Query: 676 ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+P VDTG+LP EI+KLVE+RR VK L+K PNLS + +QYDIRQKALKLTA
Sbjct: 915 EADWEAQIPPATVDTGVLPFEIRKLVENRRTVKDLLKTPNLSREKKLQYDIRQKALKLTA 974
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
NSMYGCLGF SRF+A+P+AAL+T +GR+IL++ KS+ E++ Y +IYGDTDS+MI+
Sbjct: 975 NSMYGCLGFQGSRFYAKPIAALITQRGRDILMSAKSMAESMGYSIIYGDTDSIMINTCTR 1034
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ- 854
D V +IG ++ N YK+LE+++DGV+K MLLLKKKKYAA +++ L +G + +
Sbjct: 1035 DIAQVKEIGKKLSKAINDQYKRLEIEVDGVFKSMLLLKKKKYAAHTLTFLPDGSLAGGKI 1094
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E+KG+D+VRRDWS+LA + G+FV+ +L + S DD + +H+H++++ +++
Sbjct: 1095 EVKGLDIVRRDWSELARKTGRFVVDTLLK----GELSADDAVDAVHDHLREVGKKVNDNA 1150
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
+P ITKQLTK E+Y D K HV VA R N +KKL+ GDT+ Y+ICEDGT
Sbjct: 1151 LPFEDYVITKQLTKNVEDYPDAKNQSHVLVAKRFNARGAKKLRAGDTVQYVICEDGTENP 1210
Query: 975 ATQRAYNIEELKNN---SKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
TQRAY+ EE+++ +KL +D NYYL+QQ+ PVV+RL+EPI GTDA +A+CLGLD S
Sbjct: 1211 HTQRAYSKEEMESKEFANKLTVDRNYYLTQQVFPVVSRLIEPIRGTDAAVVAQCLGLDPS 1270
Query: 1032 LY--RSQIKESIQQSEENILGVG-----EAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
Y R+ S E +G+ + +Q + F C C +V+
Sbjct: 1271 KYNRRTNFDPSGMVDSELAVGISLLLPQSLDSDLFQNVEAFTVNCTK--CDNPISVDGFV 1328
Query: 1085 RLSTHGVV-FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
+ G F+ +C +C P + L N+L++ + + ++ + C+
Sbjct: 1329 FKNMDGQTKFLFSDC--GKCHSPLLPQVDQLCNQLTKQLQQLQLESEKIMYICQMCDHRV 1386
Query: 1144 LTRRCPLG-LKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFD 1202
L C L + +C C + L Q Y QL ++ ++ D+ K F+
Sbjct: 1387 LDVLCNLHEEEIPVCPACGEDTLRLQAQAFQTYAQLRYWGFMFDLEYNREKFPNAGELFE 1446
Query: 1203 SETYMGYCK-MKQHVERFLESSAYNIVDLK----KLFSCE-EKQPKLS 1244
SE + K +++FL+ + ++ L+ KL SC K+P +S
Sbjct: 1447 SEAVRVIVESFKMRIDKFLQCNGFSNFSLRSYMEKLPSCNFTKRPIVS 1494
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 275/545 (50%), Gaps = 38/545 (6%)
Query: 59 AAFQKLKDLKGQGVKHKYEFTA-DENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVED 117
AA +K K +K G + KY+ D+N++EEV+E+EY +RV R+ + +D++G Y ++
Sbjct: 53 AALEKFKAVKS-GQRAKYDLIENDDNLFEEVTEEEYNQRVSDRRSNFVVDENGD--YKDN 109
Query: 118 GREIFDDDIEDVPQKKEKHDKR---KKNKNI----QNPNAKGDIQKLLANMPVKKKKKEE 170
G EIFD++ E+ +++ K+ + K K I Q+ G+I+ + P K+K E
Sbjct: 110 GYEIFDEEYEEAEEEERKNKPKVSYKAPKGIRKKRQDAAKSGNIRSMFLAAP-HKRKAEN 168
Query: 171 VQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEK 230
L +D +L L+ A L + E IP+ P E N +K +
Sbjct: 169 ASLEDDKLLEQLMK------AKGLNADDDDEEENIPRANPKKKQKSEVSVNPFASVKKPQ 222
Query: 231 KIEKPIKKEP---SPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQ 287
I+ P + +P +P+ + + E NV QS P ++ M D +
Sbjct: 223 NIKPPPRPKPQGDAPIPGVSANGKTPAAEEANV--QSTNFPDEEDSMSSMP--DVSVADD 278
Query: 288 TQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEW 347
T+D ++ ++ + ++ E+ D V A E+S P K
Sbjct: 279 TRDEKTPANELVGDVKVPDENTVREEDDPKPVVPTIKAEEVSQLEGPS--SAGGFKEVNM 336
Query: 348 EAIQTEPSTSEPQVHSRTADD---SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFG 404
+ + EP+V +TA LP++ + + + VFR+F+LDA+E+ Y PGTVY+FG
Sbjct: 337 NSFNEDDFDDEPEVKPQTAAKLPADLPVSENPDGETVFRLFWLDAYEEPYAHPGTVYVFG 396
Query: 405 KVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE--PVSIAQVYSEFDQIATQYKIL 462
K V +NS S ++V+NI RK++ LPR + P+ VY E ++ Q+ I
Sbjct: 397 KTTV--SNSSVSAAIVVKNIPRKLFFLPRERENENGMMCPIPFKSVYDEVKEVLKQHGIK 454
Query: 463 DFKSRKIEKKYAFNLPGVPDLSEYLEVRYS-AKC-PALPSDLSGDTFSHVFGTKSSFLEN 520
+F+ ++ EK + F GVP + YLEV+Y+ AK LP DLSG TFS VFGT +S LE
Sbjct: 455 EFRCKESEKMFVFATQGVPRKANYLEVQYNPAKAMKTLPGDLSGQTFSKVFGTSTSSLEA 514
Query: 521 LLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGN--VLSRTLMGGR 578
L+L+RK+KGPSWL+ + E + CK+E+ C ++ I +++V LS + R
Sbjct: 515 LILDRKLKGPSWLDVKQPESAHLHNTTCKFEIDCQDLKNISVSSVQAGPPALSILTLQAR 574
Query: 579 SERNE 583
+ RNE
Sbjct: 575 AVRNE 579
>gi|300681493|emb|CBH32589.1| DNA polymerase alpha catalytic subunit,putative,expressed [Triticum
aestivum]
Length = 1516
Score = 494 bits (1273), Expect = e-136, Method: Compositional matrix adjust.
Identities = 303/696 (43%), Positives = 414/696 (59%), Gaps = 88/696 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK------------E 608
++TN+ GN+ +TL G R++R E+LLLH+FH K +++PDK +NK+ E
Sbjct: 802 QLTNISGNLWGKTLQGARAQRVEYLLLHSFHAKKFIIPDKFAARNKELNSAKRKLNADTE 861
Query: 609 G-------------EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
G +E ++GK RK +Y+GGLVLEPKKG YDK+I+L+DFNSLYPSI
Sbjct: 862 GGNAADGAADPSIDDEVHNGDQGKARKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSI 921
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN 715
IQE+NICFTT V D ++ LP + TG+LP +K LVE RR VK+ +K
Sbjct: 922 IQEFNICFTT--VERSSDGNLPN----LPNSKA-TGVLPELLKSLVERRRMVKSWLK--T 972
Query: 716 LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE- 774
S Q+DI+Q+ALKLTANSMYGCLGF NSRFFA+PLA L+T +GREIL NT LV+
Sbjct: 973 ASGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFFAKPLAELITLQGREILQNTVDLVQN 1032
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKK 834
NLN EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DGVYK MLLLKK
Sbjct: 1033 NLNLEVIYGDTDSIMIYTGLDDISKAKAIAGKVIQEVNKKYRCLEIDLDGVYKRMLLLKK 1092
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
KKYAA+ ++ +G + + E KG+D+VRRDWS L+ E G F ++QIL + + DD
Sbjct: 1093 KKYAAIKVAL--DGSLRENIERKGLDMVRRDWSMLSKEIGDFCLNQIL-----SGGTCDD 1145
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+++IH + +++ + +G + L ITK LTKAPE+Y D K PHVQVALRL
Sbjct: 1146 VIESIHNSLVQVQAQMKSGQIELEKYIITKSLTKAPEDYPDAKNQPHVQVALRLKQNGFS 1205
Query: 955 KLKQGDTISYIIC-----EDGTSEAATQRAYNIEELKNN-SKLKIDVNYYLSQQIHPVVT 1008
GDT+ YIIC ++ S QRA + +ELK + +K ID+ YYLSQQIHPVV+
Sbjct: 1206 GCSAGDTVPYIICSQQDSDNTHSGGIAQRARHPDELKRDPNKWMIDIEYYLSQQIHPVVS 1265
Query: 1009 RLLEPIEGTDAVRIAECLGLDTSLYRSQ-IKESIQQSEENILGVGEAEEVKYQFCDKFEF 1067
RL IEGT R+AECLGLD+S ++S+ I S + + +L V + E+ +Y+ C+
Sbjct: 1266 RLCASIEGTSPARLAECLGLDSSKFQSRSIGSSNEDTSTMLLSVIDDEDERYRGCEPLRL 1325
Query: 1068 TCMNPSCKQVNTVEAPTRLSTHGVVFVL-------DECIN--------------PECKVP 1106
+C PSC NT E P ++ L D +N EC+V
Sbjct: 1326 SC--PSC--TNTFECP---PVSSLIASLSDPNEGKDATVNFWRRMRCPRCPDDTDECRVS 1378
Query: 1107 PYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY- 1163
P L N++ + + +I +YY+G L C+D GC T L + + T C Y
Sbjct: 1379 PAV----LANQIKRQADNFINRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYP 1434
Query: 1164 ----KLHRVYTELQLYQQLSFFHYICDITKALTKSD 1195
+L R YTE LY+QLS+F Y+ D T+ L K D
Sbjct: 1435 QCNGRLVRQYTEADLYRQLSYFCYVLDATRCLDKLD 1470
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 29/205 (14%)
Query: 384 MFFLDAFEDIYK-QPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP---------- 432
+ LDA+E+ + GTVYLFGKV + + SCCV+V+N+ R IY +P
Sbjct: 340 FYVLDAYEEPFGINSGTVYLFGKVVIGKR--FHSCCVVVKNMQRCIYAIPSSSVFPRDTI 397
Query: 433 -RSEHLKTKEPVSIAQVYSEFDQIATQYKI-----------LDFKSRKIEKKYAFNLPGV 480
R E T S + + ++++ KI +F +++ YAF V
Sbjct: 398 SRIEKNSTSSDAS-PSLRATLHELSSGLKIEVAEKLSDLNVSNFVMTPVKRNYAFERTDV 456
Query: 481 PDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
P +Y L++ Y K PA+P+DL G+ F + GT +S LE L++RKIKGPSWL +
Sbjct: 457 PIGEQYVLKINYPYKDPAVPADLRGEHFHALLGTNNSALELFLIKRKIKGPSWLSISKFV 516
Query: 540 KFPS--RISWCKYEVQCNQMEKIRI 562
PS R+SWCK+EV + + I +
Sbjct: 517 ACPSTQRVSWCKFEVTVDSPKDISV 541
>gi|357131369|ref|XP_003567311.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha catalytic
subunit-like [Brachypodium distachyon]
Length = 1538
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 306/735 (41%), Positives = 433/735 (58%), Gaps = 87/735 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG----------- 609
++TN+ GN+ +TL G R++R E+LLLH+FH K +++PDK + +NK+
Sbjct: 825 QLTNISGNLWGKTLQGARAQRVEYLLLHSFHAKKFIVPDK-FARNKELNSAKRKISADTE 883
Query: 610 --------------EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
+E ++GK RK +Y+GGLVLEPKKG YDK+I+L+DFNSLYPSI
Sbjct: 884 GANAADGAADPSIDDEVHHGDQGKARKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSI 943
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN 715
IQE+NICFTT V D ++ LP +V TG+LP +K LVE RR VK+ +K
Sbjct: 944 IQEFNICFTT--VERSSDGNLPN----LPTSKV-TGVLPELLKSLVERRRMVKSWLK--T 994
Query: 716 LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE- 774
S Q+DI+Q+ALKLTANSMYGCLGF NSRFFA+PLA L+T +GREIL NT LV+
Sbjct: 995 ASGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFFAKPLAELITLQGREILQNTVDLVQN 1054
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKK 834
NLN EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DGVYK MLLLKK
Sbjct: 1055 NLNLEVIYGDTDSIMIHTGLDDISRAKAIAGKVIQEVNKKYRCLEIDLDGVYKRMLLLKK 1114
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
KKYAA+ ++ +G + + E KG+D+VRRDWS L+ E G F ++QIL + + DD
Sbjct: 1115 KKYAAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKEIGDFCLNQIL-----SGGTCDD 1167
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+++IH + +++ + +G + L ITK LTKAPE+Y D K PHVQVALRL
Sbjct: 1168 VVESIHNSLVQVQEQMKSGQIELEKYIITKSLTKAPEDYPDAKNQPHVQVALRLKQNGFS 1227
Query: 955 KLKQGDTISYIIC-----EDGTSEAATQRAYNIEELKNN-SKLKIDVNYYLSQQIHPVVT 1008
GDT+ YIIC ++ S QRA + +ELK + +K ID++YYLSQQIHPVV+
Sbjct: 1228 GCSAGDTVPYIICSQQDSDNTHSGGIAQRARHPDELKRDPNKWMIDIDYYLSQQIHPVVS 1287
Query: 1009 RLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEEN-ILGVGEAEEVKYQFCDKFEF 1067
RL IEGT R+AECLGLD+S ++S++ S Q + +L V + E +Y+ C+
Sbjct: 1288 RLCASIEGTSPARLAECLGLDSSKFQSRLTGSTNQDMSSMLLSVIDDENERYRGCEPLRL 1347
Query: 1068 TCMNPSCKQV-------NTVEAPTRLSTHGVVFV-------LDECIN--PECKVPPYTYL 1111
+C PSC + + +P+ + V V C + EC++ P
Sbjct: 1348 SC--PSCSGTFECPPVSSLIASPSDANEGKDVNVNFWRRMRCPRCPDDSDECRISPAV-- 1403
Query: 1112 PHLINKLSQDMNKYIVKYYEGWLKCEDPGC---SDLTRRCPLGLKTRLCTTCHKY----- 1163
L N++ + + +I +YY+G L C+D GC + + +G R T C Y
Sbjct: 1404 --LANQIKRQADNFINQYYKGLLICDDEGCKYSTHIVNXRVMGDSER-GTICPNYPRCNG 1460
Query: 1164 KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-IKFDSETYMGYCKMKQ----HVER 1218
+L R YTE LY+QLS+F Y+ D T+ L K D S + F+ E ++G + +++
Sbjct: 1461 RLVRQYTEADLYRQLSYFCYVLDATRCLEKLDQKSRLPFEKE-FVGLSQTTNLAFMEIQK 1519
Query: 1219 FLESSAYNIVDLKKL 1233
+ A+ V L L
Sbjct: 1520 IRDRCAFGWVQLTDL 1534
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 101/194 (52%), Gaps = 27/194 (13%)
Query: 384 MFFLDAFEDIYK-QPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEP 442
+ LDA+E+ + GT+YLFGKV + + SCCV+V+N+ R IY +P S
Sbjct: 363 FYILDAYEEPFGVNSGTLYLFGKVEIGKR--FHSCCVVVKNMQRCIYAIPSSSVFPRDNI 420
Query: 443 VSIAQ----------VYSEFDQIATQYK-----------ILDFKSRKIEKKYAFNLPGVP 481
I + + + ++A+ K I +F +++ YAF +P
Sbjct: 421 SRIERNSTSSDASSSLRATLHELASGLKGEIADKLSDLNISNFVMTPVKRNYAFERTDLP 480
Query: 482 DLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
+ +Y L++ Y K LP+DL G+ F + GT +S LE L++RKIKGPSWL +
Sbjct: 481 NGEQYVLKINYPYKDTTLPADLRGEHFHALLGTNNSALELFLIKRKIKGPSWLSISKFGT 540
Query: 541 FPS--RISWCKYEV 552
PS R+SWCK+EV
Sbjct: 541 CPSTQRVSWCKFEV 554
>gi|339250812|ref|XP_003374391.1| DNA polymerase (Pol2) superfamily [Trichinella spiralis]
gi|316969308|gb|EFV53426.1| DNA polymerase (Pol2) superfamily [Trichinella spiralis]
Length = 1183
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 291/705 (41%), Positives = 411/705 (58%), Gaps = 42/705 (5%)
Query: 551 EVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKKE 608
+++C Q+ I IT G VLS+TL+GGR+ER E+LLLHAF ++YV P+K GK K
Sbjct: 486 KLRCLQLA-IEITRAVGGVLSKTLLGGRAERTEYLLLHAFDAQNYVYPEKVSHGGKQKVV 544
Query: 609 GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV 668
+ G KKA+Y+GGLVL+PKKG YD+ ++L+DFNSLYPSIIQE+NICFTT+ +
Sbjct: 545 VTSLDDEEIIIGSKKASYAGGLVLDPKKGLYDRIVLLLDFNSLYPSIIQEFNICFTTVDL 604
Query: 669 RMLQDSDITTLCEYLPE---HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
D I E LPE + GILP EIK+LVESRRQ+K+LMK P + DL QY
Sbjct: 605 SPFTDP-IKGSDEALPEIPDPEKAAGILPKEIKRLVESRRQLKSLMK-PGIPPDLFQQYH 662
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDT 785
IRQ+ALK+TANS+YGCLGF SRF+A+PLAAL+TAKGREIL NTK VE L EVIYGDT
Sbjct: 663 IRQQALKITANSVYGCLGFAASRFYAKPLAALITAKGREILTNTKLAVEKLGLEVIYGDT 722
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLL------------LK 833
DS+MI+ N+ D +G ++ E KL + + + +
Sbjct: 723 DSIMINSNLTSIDDALAMGKKV--EKKKLGRIAVVHFSSTCVSLCFADQSRNEQTIQAAR 780
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KKKYAALS K +G +E+KG+D+VRRDWS +A EAG +VI+ IL +D++ D
Sbjct: 781 KKKYAALSCEKRPDGSWQFKKEVKGLDIVRRDWSPIAIEAGNYVINSIL-----SDFTSD 835
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ I E++ K+ +D+ V L I KQL K+P+EY D K PHV VALR+N S
Sbjct: 836 ETAARIREYLMKLTSDVRQNKVVLGKFIIRKQLAKSPDEYQDAKGQPHVAVALRMNEKGS 895
Query: 954 KKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
+QGD I Y IC D T+ A QRAY+ E++ + ++ID +YYL+QQIHPVVTRL EP
Sbjct: 896 -HFRQGDVIPYAICLDQTNNQAMQRAYHFNEIQQGN-MQIDFDYYLAQQIHPVVTRLCEP 953
Query: 1014 IEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPS 1073
IE DA +A+ LGL ++ Y Q + ++ + + + + F C+
Sbjct: 954 IESLDAACLADWLGLKSASYAKQSNFTPPTTDLATVS-SSCSFFDHSYSEPFTVPCVE-- 1010
Query: 1074 CKQVNTVEAPTRLS-THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
C ++ +E T S + L +C +C P + +L++ L + ++K++ +YY G
Sbjct: 1011 CGKI--IEVTTLFSDMENIKLALSKCPYGDCSFKPASNRQYLVSLLRKQIHKHVHQYYLG 1068
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTR---LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
W C+D C +R + L + +C C L R Y+E +LY QL F+ I D +
Sbjct: 1069 WYVCDDSTCRYRSRYVVMKLNSEGKLICPKCPSGILIREYSEKKLYNQLCFYFTIFDFPQ 1128
Query: 1190 A---LTKSDTPSIKFDSETYMG-YCKMKQHVERFLESSAYNIVDL 1230
A L+K+ + + ++ Y + H L +AY ++L
Sbjct: 1129 ALMRLSKAKKQLARLLPKMHLSVYETLATHACSVLNDNAYGTINL 1173
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 108/205 (52%), Gaps = 22/205 (10%)
Query: 373 ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
A + +V ++LDA E K PG VYLFGKV S SCC+IV+NI R+I++LP
Sbjct: 36 AEEEGGHQVVNFYYLDAVEAGKKHPGIVYLFGKVQHLIQKSWISCCLIVKNILRRIWILP 95
Query: 433 RSEHLKTKEPVSIAQVYSEFDQIATQYKILDFK--------------SRKIEKKYAFNLP 478
R L+T EP + V+ E ++ + KI +F+ + +EKK+ N
Sbjct: 96 RQTDLQTGEPFKLEDVHQELTELMNKLKIDEFRIKVTAFCLFNALLLVKAVEKKFWLNSD 155
Query: 479 GVPDLSEYLEVRYSAK----C----PALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGP 530
+ YLE+RYS K C PAL ++L+G TF +FGT SS LE L+LE IKGP
Sbjct: 156 QYAQEAVYLELRYSVKNFLDCNFKYPALEANLTGKTFQAIFGTTSSELELLILEMNIKGP 215
Query: 531 SWLEFPEAEKFPSRISWCKYEVQCN 555
++ S+ +WC E+ N
Sbjct: 216 RLMKISNPTMAASQRTWCAVELIVN 240
>gi|242059369|ref|XP_002458830.1| hypothetical protein SORBIDRAFT_03g041040 [Sorghum bicolor]
gi|241930805|gb|EES03950.1| hypothetical protein SORBIDRAFT_03g041040 [Sorghum bicolor]
Length = 1541
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 302/735 (41%), Positives = 422/735 (57%), Gaps = 84/735 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----------------QYG 603
++TN+ GN+ +TL G R++R E+LLLH+FH + +++PDK G
Sbjct: 825 QLTNISGNLWGKTLQGARAQRVEYLLLHSFHARKFIVPDKFARNKELNSTKRKMNADTEG 884
Query: 604 KNKKEG-------EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSII 656
N +G +E ++GK RK +Y+GGLVLEPKKG YDK+++L+DFNSLYPSII
Sbjct: 885 ANADDGAADPSVDDEVHNGDQGKARKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSII 944
Query: 657 QEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
QEYNICFTT V D + LP + TG+LP ++ LVE RR VK+ +K
Sbjct: 945 QEYNICFTT--VERSSDGSVPN----LPASKA-TGVLPELLRSLVERRRMVKSWLK--TA 995
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-N 775
S Q+DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL NT LV+ N
Sbjct: 996 SGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNN 1055
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
LN EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLKKK
Sbjct: 1056 LNLEVIYGDTDSIMIHTGLDDISRAKAIAGKVIQEVNKKYRCLEIDLDGIYKRMLLLKKK 1115
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYAA+ ++ +G + + E KG+D+VRRDWS L+ + G F ++QIL + + DD
Sbjct: 1116 KYAAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKDIGDFCLNQIL-----SGGTCDDV 1168
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
+++IH + +++ + +G + L ITK LTKAPE+Y D K PHVQVALRL
Sbjct: 1169 VESIHSSLVQVQEQMRSGQIELEKYVITKSLTKAPEDYPDAKNQPHVQVALRLKQNGYSG 1228
Query: 956 LKQGDTISYIIC-----EDGTSEAATQRAYNIEELKNN-SKLKIDVNYYLSQQIHPVVTR 1009
GDT+ YIIC ++ S QRA + EELK + K ID++YYLSQQIHPVV+R
Sbjct: 1229 CSAGDTVPYIICSQQDSDNTHSVGIAQRARHPEELKRDPDKWMIDIDYYLSQQIHPVVSR 1288
Query: 1010 LLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEEN-ILGVGEAEEVKYQFCDKFEFT 1068
L I+GT R+AECLGLD++ ++S++ ES Q +L V + E+ +Y+ C+ +
Sbjct: 1289 LCASIQGTSPARLAECLGLDSAKFQSRVTESSNQDTSTMLLSVIDDEDERYRGCEPLRLS 1348
Query: 1069 CMNPSCKQVNTVEAPTRLSTHGVVFV-----LDECIN-------PEC-------KVPPYT 1109
C PSC + L T D N P C K+ P
Sbjct: 1349 C--PSCSGTFDCPPVSSLITSATSVSDPNEGKDATANFWRHMRCPRCPDNADESKISP-- 1404
Query: 1110 YLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY---- 1163
P L N++ + + +I YY+G C+D GC T L + + T C Y
Sbjct: 1405 --PMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPLCN 1462
Query: 1164 -KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-IKFDSETYMGYCKMK---QHVER 1218
+L R YTE LY+QLS+F Y+ D T+ L K D + + F+ E + Q +++
Sbjct: 1463 GRLVRQYTEADLYRQLSYFCYVLDATRCLEKLDQKARLPFEREFVAVGQTINLALQEIQK 1522
Query: 1219 FLESSAYNIVDLKKL 1233
+ A+ V LK L
Sbjct: 1523 IRDRCAFGWVQLKDL 1537
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 144/581 (24%), Positives = 254/581 (43%), Gaps = 96/581 (16%)
Query: 53 DKTNKFAAFQKLKDLKGQGVKHK--YEFTADENVYEEVSEKEYTERVLKRQED--DWIDD 108
+ + + A Q+L+ ++ ++ + D +Y+ V E+EY V +R+++ ++I D
Sbjct: 23 EASGRAARLQQLRAVRNGEIRASDVIQVKVDAPIYDTVPEEEYNVLVARRKKEAGEFIID 82
Query: 109 DGGDGYVEDGREI-------------FDDDIEDVPQKKEKHDKRKKNKNIQNPNAKG--- 152
D G GYV+DGRE DD + P+K+++ + + Q
Sbjct: 83 DDGLGYVDDGREEDWSHRALPSSSDEGSDDEDGAPRKRKQPRPPQAKRQPQQSAKAAASF 142
Query: 153 ---------DIQKLLANMPVKKK---KKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKT 200
I L + K+ + + + L D ++ D+++E + +
Sbjct: 143 SAAAAKTGQQISSLFTSSVFKRTGSDRTKSLALAADSIVDDIIAEFAPDENDREERRRRV 202
Query: 201 NEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNV 260
+ P +PP PT ++ KP KV E + + E+K ND+ ME +
Sbjct: 203 GRVSAP--QPPPPTV-----SYVKPQKVIVDAEMVRSDNGNDMAVELK-NDTEMETNLEE 254
Query: 261 AEQSKEEPVDDGLWE------QMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
S E V D L E ++ D+ + Q +A E+++E + + K
Sbjct: 255 IPGSSAELVVDNLEEIPGSSAELVFDNKSLEEPKQ-----EANGEVKVEKTHRLNAKIKA 309
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTS-EPQVHSRTADDSLPLA 373
+ + V+SA T+ ++ ++ E E + + +T+ + D +LP
Sbjct: 310 EESRNNDVTSA----TAGWMKICGNGQNAVGE-EGVTVDGNTNVDESSEFELKDGALPF- 363
Query: 374 TDHENKKVFRMFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
+ LDA+E+ + GTVYLFGKV V + SCCVIV+NI R IY +P
Sbjct: 364 -----------YILDAYEEPFGANSGTVYLFGKVEVGKR--FHSCCVIVKNIQRCIYAIP 410
Query: 433 RSEHLKT-------KEPVS---IAQVYSEFDQIATQYK-----------ILDFKSRKIEK 471
+ P S + + + ++A+ K + +F +++
Sbjct: 411 NHSVFPRDSISGIERNPTSADLLPSLRATLHELASGLKSEIADKLSDLNVSNFVMTPVKR 470
Query: 472 KYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGP 530
YAF +P+ +Y L++ Y K PALP+DL G+ F + GT +S LE L++RK+KGP
Sbjct: 471 NYAFERTDLPNGEQYVLKINYPYKDPALPADLRGEHFHALLGTNNSALELFLIKRKVKGP 530
Query: 531 SWLEFPEAEKFPS--RISWCKYEVQCNQMEKIRITNVCGNV 569
SWL + PS R+SWCK+EV + + I + N+
Sbjct: 531 SWLSVSKFVTRPSTQRVSWCKFEVTVDCPKDISVLTTSTNL 571
>gi|85541645|sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catalytic subunit
Length = 1534
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 309/741 (41%), Positives = 423/741 (57%), Gaps = 96/741 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGEA 615
++TN+ GN+ +TL G R++R E+LLLHAFH + +++PDK ++ K++ EA
Sbjct: 818 QLTNISGNLWGKTLQGSRAQRVEYLLLHAFHARKFIVPDKFARSKEFNSTKRKMNPDTEA 877
Query: 616 -----------------NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQE 658
++GK +K +Y+GGLVLEPKKG YDK+++L+DFNSLYPSIIQE
Sbjct: 878 ARPDEADPSIDDEGHHVDQGKTKKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQE 937
Query: 659 YNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSS 718
YNICFTT+ D LP + TG+LP +K LVE RR VK+ +K S
Sbjct: 938 YNICFTTV------DRSADGNVPNLPASKT-TGVLPELLKSLVERRRMVKSWLK--TASG 988
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLN 777
Q+DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL NT LV+ NLN
Sbjct: 989 LKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLN 1048
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLKKKKY
Sbjct: 1049 LEVIYGDTDSIMIHTGLDDISRAKGIAGKVIQEVNKKYRCLEIDLDGIYKRMLLLKKKKY 1108
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
AA+ ++ +G + + E KG+D+VRRDWS L+ E G F ++QIL + S DD ++
Sbjct: 1109 AAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKEIGDFCLNQIL-----SGGSCDDVIE 1161
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
+IH + +++ + G L ITK LTKAPE+Y D K PHVQVALRL
Sbjct: 1162 SIHSSLVQVQEQMRGGQTELEKYIITKSLTKAPEDYPDAKNQPHVQVALRLKQNGYSGCS 1221
Query: 958 QGDTISYIICEDGTSEAA-----TQRAYNIEELKNN-SKLKIDVNYYLSQQIHPVVTRLL 1011
GDT+ YIIC SE+ QRA + EELK N K ID++YYLSQQIHPVV+RL
Sbjct: 1222 AGDTVPYIICSQQDSESTHSGGIAQRARHPEELKRNPDKWMIDIDYYLSQQIHPVVSRLC 1281
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQ-SEENILGVGEAEEVKYQFCDKFEFTCM 1070
I+GT R+AECLGLD+S ++S++ ES Q + +L V + E+ +Y+ C+ +C
Sbjct: 1282 ASIQGTSPARLAECLGLDSSKFQSRLTESDNQDTSSMLLSVIDDEDERYRGCEPLRLSC- 1340
Query: 1071 NPSCKQVNTVEAPTRLSTHGVVFVL---------DECIN-------PEC-------KVPP 1107
PSC T + P S D IN P C +V P
Sbjct: 1341 -PSCS--TTFDCPPVSSLIIGSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSP 1397
Query: 1108 YTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-- 1163
L N++ + + +I YY+G L C+D GC T L + + T C Y
Sbjct: 1398 AV----LANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPR 1453
Query: 1164 ---KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-IKFDSETYMGYCKMKQ----- 1214
L R YTE LY+QLS+F Y+ D T+ L K D + + F+ E + + Q
Sbjct: 1454 CNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKE----FAALSQTINLA 1509
Query: 1215 --HVERFLESSAYNIVDLKKL 1233
V++ + A+ V LK L
Sbjct: 1510 LMEVQKIRDRCAFGWVQLKDL 1530
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 384 MFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE------- 435
+ LDA+E+ + GTVYLFGKV V + SCCV+V+N+ R IY +P S
Sbjct: 356 FYILDAYEEPFGANSGTVYLFGKVEVGKR--FHSCCVVVKNMQRCIYAIPSSSIFPRDTI 413
Query: 436 --------------HLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
L+ + + SE + + + +F +++ YAF +P
Sbjct: 414 SRLEKNSTTSDSSPSLRASLHELASGLKSEIADKLSDFNVSNFAMTPVKRNYAFERTDLP 473
Query: 482 DLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
+ +Y L++ Y K PALP+DL G F + GT +S LE LL++RKIKGPSWL +
Sbjct: 474 NGEQYVLKINYPYKDPALPTDLRGQHFHALLGTNNSALELLLIKRKIKGPSWLSISKFLA 533
Query: 541 FPS--RISWCKYEVQCNQMEKIRI 562
P+ R+SWCK+EV + + I +
Sbjct: 534 CPATQRVSWCKFEVTVDSPKDISV 557
>gi|403166928|ref|XP_003326779.2| DNA polymerase alpha subunit A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166785|gb|EFP82360.2| DNA polymerase alpha subunit A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1602
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 286/702 (40%), Positives = 410/702 (58%), Gaps = 46/702 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKG-- 618
++TN+ GN + TL GGR++RNEF+LLH FH ++ PDK ++K T
Sbjct: 913 QLTNLAGNNWNSTLHGGRAQRNEFILLHEFHRHKFICPDKLSFNDRKTLAATTNTTGEQG 972
Query: 619 ------KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
K KK Y GGLV EPK+G +DKFI++MDFNSLYPSIIQEYNI FTT+ R
Sbjct: 973 EGNGGNKAIKKDKYKGGLVFEPKRGLWDKFILVMDFNSLYPSIIQEYNIDFTTV-NRAGC 1031
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
D D LP + G+LP I LV RR+VK LMK P+ + QYDI+Q ALK
Sbjct: 1032 DDDENDQIPDLPPADMKQGVLPRLIATLVNRRREVKKLMKAPDTPPSKIAQYDIKQMALK 1091
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
LTANSMYGCLGF SRF+A+PLAAL T+KGREIL NT+ L E+ N +VIYGDTDS+MI+
Sbjct: 1092 LTANSMYGCLGFEGSRFYARPLAALTTSKGREILTNTRDLAESQNLDVIYGDTDSVMINT 1151
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
N D+ + KIGN+ K N+ YK LE+DIDGV++ MLLL+KKKYAAL + ++ +++
Sbjct: 1152 NALDFAAANKIGNEFKKLVNERYKLLEIDIDGVFERMLLLQKKKYAALKVDAMTQARIV- 1210
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
E+KG+D+ RR++ +L+ +A ++++ Q+L + S + ++ IHE++ ++ + +
Sbjct: 1211 --EVKGLDMKRREYCKLSKDASQYILEQVL-----SGLSTELVVEKIHEYLTELGQSVKD 1263
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDG 970
G L I K+L K P++Y D K+ PHVQVALR+ + K GD I YI C EDG
Sbjct: 1264 GKKELDDFIIHKKLGKDPKDYPDVKSQPHVQVALRMKLKGNVTPKAGDVIPYIFCLGEDG 1323
Query: 971 TS---EAATQRAYNIEELK-NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
+S A +A + +EL+ +S KID +YYLS Q+ P + R+ +PIEGTD R+AECL
Sbjct: 1324 SSSTRSAQADKARHPDELRLADSPWKIDYDYYLSLQVLPPIERMCDPIEGTDRCRLAECL 1383
Query: 1027 GLDTSLYRSQIKESI-QQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCK------QVNT 1079
GLD S +++ + Q E + L + ++ FE C + K Q +T
Sbjct: 1384 GLDPSRFKNIVATGQDSQREFHTLDSQIPDTERFSGTSPFEVRCRHCGEKFEFKGAQADT 1443
Query: 1080 VEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDP 1139
V +S G+ C N EC+ P +P + +L + ++I K+YE WL C+D
Sbjct: 1444 VGM---ISPSGL-----NCPNLECRKP--LGVPSMATQLEIQIREFIGKFYEAWLICDDA 1493
Query: 1140 GCSDLTRRCPL-GLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK-SDTP 1197
C + TR + G K + K ++ YT+ LY QL +FH + D +KA +K DT
Sbjct: 1494 ACRNRTRMMSVYGRKCLNTSMGCKGQMSYEYTDKMLYNQLLYFHSLFDPSKAESKFKDTS 1553
Query: 1198 SIKFDSETYM----GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
++T + M+ V R+L+ +A V + LFS
Sbjct: 1554 KSDMITKTLLVNQQALATMRGIVNRYLQQNARRFVAMDTLFS 1595
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 46/305 (15%)
Query: 284 NSQQTQDVLPEQAKVELQIEAIESQSIEEKVD------VTNVESVSSAVELS-------- 329
N Q+ LP + ++ +EA IE+ D N S+ ++LS
Sbjct: 363 NWQKALQALPTVSNIDPAVEAHLKVLIEDSEDKPQSSETPNAVVASTEIDLSETTEFLAN 422
Query: 330 ------TSPPPQVVEKKEHKCAEWEAIQTEPSTS-------EPQVHSRTADDSLPLATDH 376
T+ P++ +K A+ EA + P + +P ++T + T++
Sbjct: 423 IPRKSKTAQGPRITKKA---LAQAEADRHLPKPTKVDAFVPQPATDAQTTNKLTETPTEN 479
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
+ F+LD E G +YLFGKVF + + H +CCVIV+ + R +++LPR
Sbjct: 480 SQGNRLKFFWLDYQE----AEGVIYLFGKVFDQLSAKHVACCVIVEGMQRNLFVLPRPTM 535
Query: 437 LKTKEPVSIA----QVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRY 491
+ ++ + + VY E + + ++I +FK + +++KY F +P + E+ +V Y
Sbjct: 536 VD-EDGIEVKPTEDDVYDEVETVLEAHQITEFKGKLVKRKYCFEEKDMPAECDEWFKVVY 594
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLE----FPEAEKFPSRISW 547
S P + +G TFS +FGT +S E LL+RKI GP WL+ P P+ SW
Sbjct: 595 SYTKPPIARLTTGKTFSKIFGTGTSAFELFLLKRKIMGPCWLDVQGAIPSTRATPA--SW 652
Query: 548 CKYEV 552
CK EV
Sbjct: 653 CKLEV 657
Score = 42.7 bits (99), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 62 QKLKDLKGQ--GVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVEDG 118
Q L+ LK G K Y+ + DE +YE VSE +Y V R EDD+I++D GYV+ G
Sbjct: 11 QHLEALKAARAGQKRDYKASQDEAIYETVSEDQYKSIVKGRLAEDDFIENDDDSGYVDQG 70
>gi|255565234|ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
gi|223537171|gb|EEF38804.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
Length = 1526
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 297/700 (42%), Positives = 410/700 (58%), Gaps = 87/700 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK----------------QYGK 604
++TN+ GN+ +TL G R++R E+LLLHAFH K Y++PDK G
Sbjct: 805 QLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKNSFHLKKETKMTKRRIHNGV 864
Query: 605 NKKEGEE-----------TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYP 653
+K EE + E ++GKG+K AY GGLVLEPKKG YDK+++L+DFNSLYP
Sbjct: 865 EEKNAEELDTDHANFDNDSPENDRGKGKKGPAYVGGLVLEPKKGLYDKYVLLLDFNSLYP 924
Query: 654 SIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ 713
SIIQEYNICFTT+ + L LP + TG+LP +K LVE RR VK+ MK
Sbjct: 925 SIIQEYNICFTTV------EKSTDGLVPRLPSIKT-TGVLPELLKNLVERRRMVKSWMK- 976
Query: 714 PNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV 773
N S + Q DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL +T LV
Sbjct: 977 -NASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLV 1035
Query: 774 E-NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLL 832
+ NLN EVIYGDTDS+MI + D I ++ E NK Y+ LE+D+DG+YK MLLL
Sbjct: 1036 QNNLNLEVIYGDTDSIMIYSGLEDITKAKAIAGKVIQEVNKKYRCLEIDLDGLYKRMLLL 1095
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KKKKYAA+ + + +G E KG+D+VRRDWS L+ E G F ++QIL + S
Sbjct: 1096 KKKKYAAVKL-QFKDGTPYEVIERKGLDMVRRDWSLLSKELGDFCLAQIL-----SGGSC 1149
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
+D +++IH + K++ ++ NG V L ITK LTK PE Y D K PHV VALRL +
Sbjct: 1150 EDVVESIHNSLMKVQEEMRNGQVALEKYIITKTLTKPPEAYPDAKNQPHVMVALRLKQSG 1209
Query: 953 -SKKLKQGDTISYIICED-----GTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHP 1005
+ GDT+ YIIC + G+S QRA + +EL K++ K ID++YYLSQQIHP
Sbjct: 1210 YTTGCSVGDTVPYIICCEQGATPGSSSGIAQRARHPDELKKDDGKWMIDIDYYLSQQIHP 1269
Query: 1006 VVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKF 1065
VV+RL I+GT R+A+CLGLD+S ++ + E+I + L +E +Y+ C+
Sbjct: 1270 VVSRLCASIQGTSPERLADCLGLDSSKFQIKSSEAINNDPASSLLFAVNDEERYRSCEPL 1329
Query: 1066 EFTCMNPSCKQVNTVEAP-------TRLSTHGVVFVLDECIN--------PEC------- 1103
+C PSC T E P T +S + ++E ++ P+C
Sbjct: 1330 LLSC--PSCS--GTFECPAVFGSICTSISANPTKLQVEESVSNFWCRMRCPKCPEEGDTG 1385
Query: 1104 KVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCH 1161
++ P L N++ + ++ YY+G + C+D C +TR L L + T C
Sbjct: 1386 RISP----AMLANQVKRQAEGFVSMYYKGLMTCDDETCKHITRSLNLRLIGDSERGTVCP 1441
Query: 1162 KY-----KLHRVYTELQLYQQLSFFHYICDITKALTKSDT 1196
Y +L R YTE +LY+QLSF+ Y+ D + + K D
Sbjct: 1442 NYPRCNGRLVRKYTEAELYKQLSFYCYLLDTVRCMEKMDA 1481
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 133/267 (49%), Gaps = 55/267 (20%)
Query: 345 AEWEAIQTEPSTSEPQVHSRT---------------ADDSLPLATDHENKKVFRMFFLDA 389
A+W+A+++ + S V AD SLP + +DA
Sbjct: 299 ADWQAVRSGGNGSVAGVTEEVKSGVVCDEQSEFELEADGSLPF------------YIIDA 346
Query: 390 FEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQ- 447
E+I+ GT+YLFGKV K N++ SCC++V+N+ R +Y +P T++ + + +
Sbjct: 347 HEEIFGANMGTLYLFGKV--KAGNTYHSCCMVVKNMQRCVYAIPNGSIFHTEDMIRLEKD 404
Query: 448 ------------------VYSEFDQIATQYKILD---FKSRKIEKKYAFNLPGVPDLSEY 486
Y ++IA Q+ L+ F +++KYAF +P Y
Sbjct: 405 VEESRISPAEFRKKLQDVAYELKNEIANQFLSLNVSSFSMTPVKRKYAFERQDIPVGENY 464
Query: 487 -LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-- 543
L++ YS K P LP+DL G+TFS + GT S LE L++RK+KGPSWL + P+
Sbjct: 465 ALKINYSFKEPPLPADLKGETFSALLGTHCSALELFLVKRKVKGPSWLSVSKFSTCPASQ 524
Query: 544 RISWCKYEVQCNQMEKIRITNVCGNVL 570
R+SWCK+E+ + + IR+++ N +
Sbjct: 525 RVSWCKFEITADSPKDIRVSSSSKNTI 551
>gi|115441281|ref|NP_001044920.1| Os01g0868300 [Oryza sativa Japonica Group]
gi|113534451|dbj|BAF06834.1| Os01g0868300, partial [Oryza sativa Japonica Group]
Length = 1244
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 309/741 (41%), Positives = 423/741 (57%), Gaps = 96/741 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGEA 615
++TN+ GN+ +TL G R++R E+LLLHAFH + +++PDK ++ K++ EA
Sbjct: 528 QLTNISGNLWGKTLQGSRAQRVEYLLLHAFHARKFIVPDKFARSKEFNSTKRKMNPDTEA 587
Query: 616 -----------------NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQE 658
++GK +K +Y+GGLVLEPKKG YDK+++L+DFNSLYPSIIQE
Sbjct: 588 ARPDEADPSIDDEGHHVDQGKTKKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQE 647
Query: 659 YNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSS 718
YNICFTT+ D LP + TG+LP +K LVE RR VK+ +K S
Sbjct: 648 YNICFTTV------DRSADGNVPNLPASKT-TGVLPELLKSLVERRRMVKSWLKTA--SG 698
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLN 777
Q+DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL NT LV+ NLN
Sbjct: 699 LKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLN 758
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLKKKKY
Sbjct: 759 LEVIYGDTDSIMIHTGLDDISRAKGIAGKVIQEVNKKYRCLEIDLDGIYKRMLLLKKKKY 818
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
AA+ ++ +G + + E KG+D+VRRDWS L+ E G F ++QIL + S DD ++
Sbjct: 819 AAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKEIGDFCLNQIL-----SGGSCDDVIE 871
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
+IH + +++ + G L ITK LTKAPE+Y D K PHVQVALRL
Sbjct: 872 SIHSSLVQVQEQMRGGQTELEKYIITKSLTKAPEDYPDAKNQPHVQVALRLKQNGYSGCS 931
Query: 958 QGDTISYIICEDGTSEAA-----TQRAYNIEELKNN-SKLKIDVNYYLSQQIHPVVTRLL 1011
GDT+ YIIC SE+ QRA + EELK N K ID++YYLSQQIHPVV+RL
Sbjct: 932 AGDTVPYIICSQQDSESTHSGGIAQRARHPEELKRNPDKWMIDIDYYLSQQIHPVVSRLC 991
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQ-SEENILGVGEAEEVKYQFCDKFEFTCM 1070
I+GT R+AECLGLD+S ++S++ ES Q + +L V + E+ +Y+ C+ +C
Sbjct: 992 ASIQGTSPARLAECLGLDSSKFQSRLTESDNQDTSSMLLSVIDDEDERYRGCEPLRLSC- 1050
Query: 1071 NPSCKQVNTVEAPTRLSTHGVVFVL---------DECIN-------PEC-------KVPP 1107
PSC T + P S D IN P C +V P
Sbjct: 1051 -PSCS--TTFDCPPVSSLIIGSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSP 1107
Query: 1108 YTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-- 1163
L N++ + + +I YY+G L C+D GC T L + + T C Y
Sbjct: 1108 AV----LANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPR 1163
Query: 1164 ---KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-IKFDSETYMGYCKMKQ----- 1214
L R YTE LY+QLS+F Y+ D T+ L K D + + F+ E + + Q
Sbjct: 1164 CNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKE----FAALSQTINLA 1219
Query: 1215 --HVERFLESSAYNIVDLKKL 1233
V++ + A+ V LK L
Sbjct: 1220 LMEVQKIRDRCAFGWVQLKDL 1240
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 384 MFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE------- 435
+ LDA+E+ + GTVYLFGKV V + SCCV+V+N+ R IY +P S
Sbjct: 66 FYILDAYEEPFGANSGTVYLFGKVEVGKR--FHSCCVVVKNMQRCIYAIPSSSIFPRDTI 123
Query: 436 --------------HLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
L+ + + SE + + + +F +++ YAF +P
Sbjct: 124 SRLEKNSTTSDSSPSLRASLHELASGLKSEIADKLSDFNVSNFAMTPVKRNYAFERTDLP 183
Query: 482 DLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
+ +Y L++ Y K PALP+DL G F + GT +S LE LL++RKIKGPSWL +
Sbjct: 184 NGEQYVLKINYPYKDPALPTDLRGQHFHALLGTNNSALELLLIKRKIKGPSWLSISKFLA 243
Query: 541 FPS--RISWCKYEVQCNQMEKIRI 562
P+ R+SWCK+EV + + I +
Sbjct: 244 CPATQRVSWCKFEVTVDSPKDISV 267
>gi|390370603|ref|XP_001196001.2| PREDICTED: DNA polymerase alpha catalytic subunit, partial
[Strongylocentrotus purpuratus]
Length = 517
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/520 (48%), Positives = 343/520 (65%), Gaps = 19/520 (3%)
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYG 783
YDIRQKALKLTANSMYGCLGF +SRF+A+PLAALVT+KGREIL++TK LV+ +N +VIYG
Sbjct: 1 YDIRQKALKLTANSMYGCLGFSHSRFYAKPLAALVTSKGREILMHTKELVQKMNLDVIYG 60
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
DTDS+MI+ N D+D+VFK+GN++K+E NKLY+ LE+DIDGV++ MLLLKKKKYAA+++
Sbjct: 61 DTDSIMINTNSTDHDTVFKLGNRVKTEVNKLYRLLEIDIDGVFQSMLLLKKKKYAAITVE 120
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIH 900
+L +G + S+E+KG+D+VRRDW LA + G + I QIL S D R + NIH
Sbjct: 121 RLLDGTLKTSKEMKGLDIVRRDWCDLAKKVGSYAIDQIL--------SADSREVIVDNIH 172
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK-LKQG 959
H+ ++ + G +PL EI K LTKAP++Y D+K+LPHV VALRLN+ K + G
Sbjct: 173 SHLVELGEKVAAGTIPLDQYEINKGLTKAPQDYPDKKSLPHVNVALRLNSQGGGKPIGAG 232
Query: 960 DTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
DT+SYIIC DG++ A QRAY+ +EL+ LK+D YYL+QQ+HPVV+RL PIEGTDA
Sbjct: 233 DTVSYIICVDGSNLPAGQRAYHPDELRKQEHLKVDTKYYLAQQVHPVVSRLCNPIEGTDA 292
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNT 1079
IAECLGLD S YR ++ + + +LG E +E +++ D+F+F C N +CK+ N
Sbjct: 293 AHIAECLGLDASGYRQSVRH-YEDENDALLGAQEDDEERFKDADRFKFICPNSACKRENI 351
Query: 1080 VEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDP 1139
V++ + L C + C P ++ L NKL Y+ KYY GWL CED
Sbjct: 352 VDSVFTGTGSLAEARLSYC-DSRCGTVPADHVTMLGNKLRLLTRSYVQKYYAGWLICEDT 410
Query: 1140 GCSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTP 1197
C+ TRR PL + +C C + L Y++ +LY QL FF I D KALT+++
Sbjct: 411 SCAHRTRRLPLNPHRQGFVCPVCQRAVLRPEYSDKELYTQLCFFQTIFDYEKALTENNDK 470
Query: 1198 SIKFDSE---TYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ E Y +KQ ++ L ++AY+ VDL KLF
Sbjct: 471 AKSRSQEPASVRAAYQTLKQIIDVRLAANAYSEVDLSKLF 510
>gi|218189439|gb|EEC71866.1| hypothetical protein OsI_04575 [Oryza sativa Indica Group]
Length = 1532
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 307/741 (41%), Positives = 421/741 (56%), Gaps = 98/741 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGEA 615
++TN+ GN+ +TL G R++R E+LLLHAFH + +++PDK ++ K++ EA
Sbjct: 818 QLTNISGNLWGKTLQGARAQRVEYLLLHAFHARKFIVPDKFARSKEFNSTKRKMNPDTEA 877
Query: 616 -----------------NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQE 658
++GK +K +Y+GGLVLEPKKG YDK+++L+DFNSLYPSIIQE
Sbjct: 878 ARPDEADPSIDDEGHHVDQGKTKKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQE 937
Query: 659 YNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSS 718
YNICFTT+ D LP + TG+LP +K LVE RR VK+ +K S
Sbjct: 938 YNICFTTV------DRSADGNVPNLPASKT-TGVLPELLKSLVERRRMVKSWLK--TASG 988
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLN 777
Q+DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL NT LV+ NLN
Sbjct: 989 LKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLN 1048
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLKKKKY
Sbjct: 1049 LEVIYGDTDSIMIHTGLDDISRAKGIAGKVIQEVNKKYRCLEIDLDGIYKRMLLLKKKKY 1108
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
AA+ ++ +G + + E KG+D+VRRDWS L+ E G F ++QIL + S DD ++
Sbjct: 1109 AAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKEIGDFCLNQIL-----SGGSCDDVIE 1161
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
+IH + +++ + G L ITK LTKAPE+Y D K PH VALRL
Sbjct: 1162 SIHSSLVQVQEQMRGGQTELEKYIITKSLTKAPEDYPDAKNQPH--VALRLKQNGYSGCS 1219
Query: 958 QGDTISYIICEDGTSEAA-----TQRAYNIEELKNN-SKLKIDVNYYLSQQIHPVVTRLL 1011
GDT+ YIIC SE+ QRA + EELK N K ID++YYLSQQIHPVV+RL
Sbjct: 1220 AGDTVPYIICSQQDSESTHSGGIAQRARHPEELKRNPDKWMIDIDYYLSQQIHPVVSRLC 1279
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQ-SEENILGVGEAEEVKYQFCDKFEFTCM 1070
I+GT R+AECLGLD+S ++S++ ES Q + +L V + E+ +Y+ C+ +C
Sbjct: 1280 ASIQGTSPARLAECLGLDSSKFQSRLTESDNQDTSSTLLSVIDDEDERYRGCEPLRLSC- 1338
Query: 1071 NPSCKQVNTVEAPTRLSTHGVVFVL---------DECIN-------PEC-------KVPP 1107
PSC T + P S D IN P C +V P
Sbjct: 1339 -PSCS--TTFDCPPVSSLIIGSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSP 1395
Query: 1108 YTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-- 1163
L N++ + + +I YY+G L C+D GC T L + + T C Y
Sbjct: 1396 AV----LANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPR 1451
Query: 1164 ---KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-IKFDSETYMGYCKMKQ----- 1214
L R YTE LY+QLS+F Y+ D T+ L K D + + F+ E + + Q
Sbjct: 1452 CNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKE----FAALSQTINLA 1507
Query: 1215 --HVERFLESSAYNIVDLKKL 1233
V++ + A+ V LK L
Sbjct: 1508 LMEVQKIRDRCAFGWVQLKDL 1528
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 384 MFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE------- 435
+ LDA+E+ + GTVYLFGKV V + SCCV+V+N+ R IY +P S
Sbjct: 356 FYILDAYEEPFGANSGTVYLFGKVEVGKR--FHSCCVVVKNMQRCIYAIPSSSIFPRDTI 413
Query: 436 --------------HLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
L+ + + SE + + + +F +++ YAF +P
Sbjct: 414 SRLEKNSTTSDSSPSLRASLHELASGLKSEIADKLSDFNVSNFAMTPVKRNYAFERTDLP 473
Query: 482 DLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
+ +Y L++ Y K PALP+DL G F + GT +S LE LL++RKIKGPSWL +
Sbjct: 474 NGEQYVLKINYPYKDPALPTDLRGQHFHALLGTNNSALELLLIKRKIKGPSWLSISKFVA 533
Query: 541 FPS--RISWCKYEVQCNQMEKIRI 562
P+ R+SWCK+EV + + I +
Sbjct: 534 CPATQRVSWCKFEVTVDSPKDISV 557
>gi|340369430|ref|XP_003383251.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Amphimedon
queenslandica]
Length = 1359
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 301/685 (43%), Positives = 410/685 (59%), Gaps = 47/685 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKKEGEETGEANKG 618
+IT + GN LSRTL+GGRSERNE+LLLHAF ++ Y+ PDK K+ EE E+
Sbjct: 707 QITRIAGNTLSRTLLGGRSERNEYLLLHAFTQQGYLPPDKLDSASKHHHGNEEEEESAPA 766
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP-VRMLQDSDIT 677
R K++Y GGLVL+PK GFYD+ I+L+DFNSLYPSIIQEYNICFTTI D DI
Sbjct: 767 SKRGKSSYVGGLVLDPKTGFYDRLILLLDFNSLYPSIIQEYNICFTTIDHAHCNSDEDIG 826
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
L P V GILPS+I+ LVE RRQVK LMK P LS + L QYDIRQKALKLTANS
Sbjct: 827 LL--EPPGDSVPQGILPSQIRVLVERRRQVKRLMKDPGLSPETLQQYDIRQKALKLTANS 884
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
MYGCLGF +SRFFA+PLAA+VT KGR+IL T+ L L +VIYGDTDS+MI D
Sbjct: 885 MYGCLGFSHSRFFAKPLAAVVTRKGRQILEQTRDLATKLGLDVIYGDTDSIMIDSGTKDL 944
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
+ + ++K+E NKLY+ LE+D+DG++K MLLLKKKKYAA+SI NGK+I +E+K
Sbjct: 945 EVAESLAKKVKTEVNKLYRLLEIDVDGIFKCMLLLKKKKYAAVSIHS-QNGKLIEKRELK 1003
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+D+VRRDW LA AG +++ +IL +++D+ ++ I ++++R D+ N V L
Sbjct: 1004 GLDIVRRDWCDLAKRAGHYILDKIL-----AGHNIDELIEEIQTFLRQLREDVLNSKVDL 1058
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA-T 976
ITK LTK P++Y D+K+LPHVQVA+R+ + + ++ GD I Y++C G + +
Sbjct: 1059 REFVITKGLTKMPKDYPDKKSLPHVQVAMRM-LSRQQYVQPGDVIPYVVCLMGDDNVSPS 1117
Query: 977 QRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY--R 1034
RAY+ E+ +L++D YYL Q+H VV RL EPIEG D+ +AE LGLD S Y R
Sbjct: 1118 LRAYHPMEV-TQQQLQVDHKYYLQHQVHAVVGRLCEPIEGLDSAHLAEWLGLDPSSYVQR 1176
Query: 1035 SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMN-PSCKQVNTVEAPTRLSTHGVVF 1093
+ EE EA+ V Q +K + C++ P+C + + + V F
Sbjct: 1177 GGGGGGGRGDEEE-----EADVVLPQ--EKSDPLCVSCPTCDKTISFH----YTGKKVSF 1225
Query: 1094 VLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLK 1153
V C +C + +++ L + + YI YY+GWL C G R GL
Sbjct: 1226 V---CGGRDCHNSLSRF--YMMAALGKALRYYISLYYQGWLTCSSCG-----YRTRTGLS 1275
Query: 1154 TRLCTTCHKYKLHRVYTELQLYQQLSFFH--YICDITKALTKSDTP-SIKFDSETYMGYC 1210
+C L Y+ LY QL F ++ K K + P + K D Y
Sbjct: 1276 CAVCGPKEDAVLREEYSSSDLYAQLCSFRDLFLSQGHKQECKEECPRACKGD------YK 1329
Query: 1211 KMKQHVERFLESSAYNIVDLKKLFS 1235
Q V+ L +++Y+ V+L +FS
Sbjct: 1330 DCLQLVQDTLSNNSYSRVNLGGIFS 1354
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 276/547 (50%), Gaps = 70/547 (12%)
Query: 46 RAKRQKIDKTNKFA-AFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDD 104
R+ R++ K N+ + A +K+K + G++ + E A E+++EEV+E+EY + + RQ D+
Sbjct: 16 RSNRER--KRNRASDALEKIKLARQTGIRQEEELEAPESLFEEVTEEEYADLIHTRQRDN 73
Query: 105 WIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKG--DIQKLL---- 158
++ DD G Y E GREIFD+++ P + K K K + ++ G DI+ ++
Sbjct: 74 FVLDDDGT-YCEHGREIFDEEVTTTPTSSKGAKKSKSYKAPFSRSSGGASDIKSMVMGMG 132
Query: 159 --ANMPVKKKKKEEVQLNNDDVLADLLSEVN--TTIAPTLKLNTKTNEIVIPKEEP---- 210
E + ND VL ++LS+++ +T + P+ P
Sbjct: 133 GAKKKTKGGGTGSEGSVKNDLVLNNILSQISVPSTTKASPSSKKSKTLSFSPRTGPKGGV 192
Query: 211 PAPTAKEYLAN--FSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEP 268
AP + L + +KVE + K + + SV + +M + + P
Sbjct: 193 SAPPTRPVLPRPVTTPTVKVEMPLRKERVVKEEEEEVSTFDFGSVHDEDMMTTDYLVDVP 252
Query: 269 VDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVEL 328
DGL ++ ++D+ N + ++ EQAK E+ + VE+VS
Sbjct: 253 --DGLTQEFEVDESINEEDDKENTVEQAK--------------ERRETVPVEAVS----- 291
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTAD-----DSLPLATDHENKKVFR 383
WE ++ E +SE +R D SLPL D + R
Sbjct: 292 ---------------VTGWETVKEEEFSSE-TTPNRKEDLNIDTSSLPLQEDADGNPFIR 335
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----- 438
++LDA+ED+Y+QPG VYLFGK+ ++ +H SCCV+VQNI+R +Y LPR + L
Sbjct: 336 FYWLDAYEDLYRQPGVVYLFGKIPIQ--GTHVSCCVVVQNIERCLYFLPREKLLSKSGKP 393
Query: 439 TKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA 497
T E VS+ VY EF++ A +++I+ F S+ +++KYAF+LP +P S+YLEVRYSA+ PA
Sbjct: 394 TDEDVSMKDVYVEFNESFAEKHRIMKFASKSVDRKYAFHLPDIPRDSKYLEVRYSARHPA 453
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQM 557
P SG ++S VFGT ++ LE L++ +KGP W++ + +SWCK E + +
Sbjct: 454 PPPTSSGLSYSCVFGTNTTSLERLIIGCGLKGPCWIDVKLPSPSTNSVSWCKIECITDGL 513
Query: 558 EKIRITN 564
+ + +
Sbjct: 514 TSVGVAS 520
>gi|56784778|dbj|BAD81999.1| putative DNA polymerase alpha catalytic subunit [Oryza sativa
Japonica Group]
Length = 1532
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 307/741 (41%), Positives = 421/741 (56%), Gaps = 98/741 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGEA 615
++TN+ GN+ +TL G R++R E+LLLHAFH + +++PDK ++ K++ EA
Sbjct: 818 QLTNISGNLWGKTLQGSRAQRVEYLLLHAFHARKFIVPDKFARSKEFNSTKRKMNPDTEA 877
Query: 616 -----------------NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQE 658
++GK +K +Y+GGLVLEPKKG YDK+++L+DFNSLYPSIIQE
Sbjct: 878 ARPDEADPSIDDEGHHVDQGKTKKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQE 937
Query: 659 YNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSS 718
YNICFTT+ D LP + TG+LP +K LVE RR VK+ +K S
Sbjct: 938 YNICFTTV------DRSADGNVPNLPASKT-TGVLPELLKSLVERRRMVKSWLK--TASG 988
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLN 777
Q+DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL NT LV+ NLN
Sbjct: 989 LKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLN 1048
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLKKKKY
Sbjct: 1049 LEVIYGDTDSIMIHTGLDDISRAKGIAGKVIQEVNKKYRCLEIDLDGIYKRMLLLKKKKY 1108
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
AA+ ++ +G + + E KG+D+VRRDWS L+ E G F ++QIL + S DD ++
Sbjct: 1109 AAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKEIGDFCLNQIL-----SGGSCDDVIE 1161
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
+IH + +++ + G L ITK LTKAPE+Y D K PH VALRL
Sbjct: 1162 SIHSSLVQVQEQMRGGQTELEKYIITKSLTKAPEDYPDAKNQPH--VALRLKQNGYSGCS 1219
Query: 958 QGDTISYIICEDGTSEAA-----TQRAYNIEELKNN-SKLKIDVNYYLSQQIHPVVTRLL 1011
GDT+ YIIC SE+ QRA + EELK N K ID++YYLSQQIHPVV+RL
Sbjct: 1220 AGDTVPYIICSQQDSESTHSGGIAQRARHPEELKRNPDKWMIDIDYYLSQQIHPVVSRLC 1279
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQ-SEENILGVGEAEEVKYQFCDKFEFTCM 1070
I+GT R+AECLGLD+S ++S++ ES Q + +L V + E+ +Y+ C+ +C
Sbjct: 1280 ASIQGTSPARLAECLGLDSSKFQSRLTESDNQDTSSMLLSVIDDEDERYRGCEPLRLSC- 1338
Query: 1071 NPSCKQVNTVEAPTRLSTHGVVFVL---------DECIN-------PEC-------KVPP 1107
PSC T + P S D IN P C +V P
Sbjct: 1339 -PSCS--TTFDCPPVSSLIIGSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSP 1395
Query: 1108 YTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-- 1163
L N++ + + +I YY+G L C+D GC T L + + T C Y
Sbjct: 1396 AV----LANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPR 1451
Query: 1164 ---KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-IKFDSETYMGYCKMKQ----- 1214
L R YTE LY+QLS+F Y+ D T+ L K D + + F+ E + + Q
Sbjct: 1452 CNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKE----FAALSQTINLA 1507
Query: 1215 --HVERFLESSAYNIVDLKKL 1233
V++ + A+ V LK L
Sbjct: 1508 LMEVQKIRDRCAFGWVQLKDL 1528
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 384 MFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE------- 435
+ LDA+E+ + GTVYLFGKV V + SCCV+V+N+ R IY +P S
Sbjct: 356 FYILDAYEEPFGANSGTVYLFGKVEVGKR--FHSCCVVVKNMQRCIYAIPSSSIFPRDTI 413
Query: 436 --------------HLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
L+ + + SE + + + +F +++ YAF +P
Sbjct: 414 SRLEKNSTTSDSSPSLRASLHELASGLKSEIADKLSDFNVSNFAMTPVKRNYAFERTDLP 473
Query: 482 DLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
+ +Y L++ Y K PALP+DL G F + GT +S LE LL++RKIKGPSWL +
Sbjct: 474 NGEQYVLKINYPYKDPALPTDLRGQHFHALLGTNNSALELLLIKRKIKGPSWLSISKFLA 533
Query: 541 FPS--RISWCKYEVQCNQMEKIRI 562
P+ R+SWCK+EV + + I +
Sbjct: 534 CPATQRVSWCKFEVTVDSPKDISV 557
>gi|222619596|gb|EEE55728.1| hypothetical protein OsJ_04212 [Oryza sativa Japonica Group]
Length = 1523
Score = 474 bits (1221), Expect = e-130, Method: Compositional matrix adjust.
Identities = 307/741 (41%), Positives = 421/741 (56%), Gaps = 98/741 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGEA 615
++TN+ GN+ +TL G R++R E+LLLHAFH + +++PDK ++ K++ EA
Sbjct: 809 QLTNISGNLWGKTLQGSRAQRVEYLLLHAFHARKFIVPDKFARSKEFNSTKRKMNPDTEA 868
Query: 616 -----------------NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQE 658
++GK +K +Y+GGLVLEPKKG YDK+++L+DFNSLYPSIIQE
Sbjct: 869 ARPDEADPSIDDEGHHVDQGKTKKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQE 928
Query: 659 YNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSS 718
YNICFTT+ D LP + TG+LP +K LVE RR VK+ +K S
Sbjct: 929 YNICFTTV------DRSADGNVPNLPASKT-TGVLPELLKSLVERRRMVKSWLK--TASG 979
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLN 777
Q+DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL NT LV+ NLN
Sbjct: 980 LKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLN 1039
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLKKKKY
Sbjct: 1040 LEVIYGDTDSIMIHTGLDDISRAKGIAGKVIQEVNKKYRCLEIDLDGIYKRMLLLKKKKY 1099
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
AA+ ++ +G + + E KG+D+VRRDWS L+ E G F ++QIL + S DD ++
Sbjct: 1100 AAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKEIGDFCLNQIL-----SGGSCDDVIE 1152
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
+IH + +++ + G L ITK LTKAPE+Y D K PH VALRL
Sbjct: 1153 SIHSSLVQVQEQMRGGQTELEKYIITKSLTKAPEDYPDAKNQPH--VALRLKQNGYSGCS 1210
Query: 958 QGDTISYIICEDGTSEAA-----TQRAYNIEELKNN-SKLKIDVNYYLSQQIHPVVTRLL 1011
GDT+ YIIC SE+ QRA + EELK N K ID++YYLSQQIHPVV+RL
Sbjct: 1211 AGDTVPYIICSQQDSESTHSGGIAQRARHPEELKRNPDKWMIDIDYYLSQQIHPVVSRLC 1270
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQ-SEENILGVGEAEEVKYQFCDKFEFTCM 1070
I+GT R+AECLGLD+S ++S++ ES Q + +L V + E+ +Y+ C+ +C
Sbjct: 1271 ASIQGTSPARLAECLGLDSSKFQSRLTESDNQDTSSMLLSVIDDEDERYRGCEPLRLSC- 1329
Query: 1071 NPSCKQVNTVEAPTRLSTHGVVFVL---------DECIN-------PEC-------KVPP 1107
PSC T + P S D IN P C +V P
Sbjct: 1330 -PSCS--TTFDCPPVSSLIIGSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSP 1386
Query: 1108 YTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-- 1163
L N++ + + +I YY+G L C+D GC T L + + T C Y
Sbjct: 1387 AV----LANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPR 1442
Query: 1164 ---KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-IKFDSETYMGYCKMKQ----- 1214
L R YTE LY+QLS+F Y+ D T+ L K D + + F+ E + + Q
Sbjct: 1443 CNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKE----FAALSQTINLA 1498
Query: 1215 --HVERFLESSAYNIVDLKKL 1233
V++ + A+ V LK L
Sbjct: 1499 LMEVQKIRDRCAFGWVQLKDL 1519
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 35/203 (17%)
Query: 384 MFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE------- 435
+ LDA+E+ + GTVYLFGKV V + SCCV+V+N+ R IY +P S
Sbjct: 357 FYILDAYEEPFGANSGTVYLFGKVEVGKR--FHSCCVVVKNMQRCIYAIPSSSIFPRDTI 414
Query: 436 --------------HLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
L+ + + SE + + + +F +++ YAF +P
Sbjct: 415 SRLEKNSTTSDSSPSLRASLHELASGLKSEIADKLSDFNVSNFAMTPVKRNYAFERTDLP 474
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
PALP+DL G F + GT +S LE LL++RKIKGPSWL +
Sbjct: 475 KWGPD---------PALPTDLRGQHFHALLGTNNSALELLLIKRKIKGPSWLSISKFLAC 525
Query: 542 PS--RISWCKYEVQCNQMEKIRI 562
P+ R+SWCK+EV + + I +
Sbjct: 526 PATQRVSWCKFEVTVDSPKDISV 548
>gi|403415899|emb|CCM02599.1| predicted protein [Fibroporia radiculosa]
Length = 1470
Score = 471 bits (1212), Expect = e-129, Method: Compositional matrix adjust.
Identities = 280/702 (39%), Positives = 409/702 (58%), Gaps = 59/702 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK +GK E+ + + +G
Sbjct: 797 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKLWGKKAATAEKEMQDDDLEG 856
Query: 621 RKKAA------YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
KA Y GGLV EPK+G +DKFI++MDFNSLYPSIIQEYNI FTT V ++D
Sbjct: 857 GGKATKSKRDKYKGGLVFEPKRGLWDKFILVMDFNSLYPSIIQEYNIDFTT--VDRVEDE 914
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
D P V G+LP I LV RRQVK+LMK + L+Q+DI+Q ALKLT
Sbjct: 915 DGEEKIPEPPSSDVALGVLPRLIATLVGRRRQVKSLMKDRKATQSQLLQWDIKQMALKLT 974
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF SRF+A+PLAAL T KGREIL +T+ L E+L +V+YGDTDS+ ++ NV
Sbjct: 975 ANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFVNSNV 1034
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
D KI ++ K N Y+ LE+D+DG+++ +LLL+KKKYAA+ K+ +G S
Sbjct: 1035 TDLAEALKISSEFKKAVNDRYRLLEIDLDGIFQRLLLLQKKKYAAI---KVEDGTRT-ST 1090
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E+KG+D+ RR++ L+ ++V+ QIL + + ++ +H+++ + D+ G
Sbjct: 1091 EVKGLDMKRREYCNLSKNVSQYVLDQILSGE-----ETETVVERVHDYLTTMGEDVRAGK 1145
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
+ L + K+L K PE+Y D K+ PHVQVALR+ + GD I Y+ C + +E+
Sbjct: 1146 IKLEDFIVFKRLGKNPEDYPDGKSQPHVQVALRM-KVRGGTARSGDVIPYVFCLNDNNES 1204
Query: 975 A----TQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
A RA + +E++ ++L+ID YYLSQQI P + RL EPIEGTD R+AECLGLD
Sbjct: 1205 AKSAQADRARHPDEVRRAGAELRIDYEYYLSQQILPPIERLCEPIEGTDRARLAECLGLD 1264
Query: 1030 TSLYRSQIKESIQQSEENILG-----VGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
S YR+ S +SEE G + +AE +++ CD F C SC Q AP
Sbjct: 1265 ASRYRT----SAGESEERYFGSFDSLISDAE--RFKDCDPFIVRCR--SC-QGQVAYAP- 1314
Query: 1085 RLSTHGVVFVLDECINPECKVPPYTYL--PHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
+S G + P C +T++ P L +L + +++ ++YEGW+ C+DP C
Sbjct: 1315 -ISDRGSTLL--SSAGPACPA-CHTHMGQPSLQVQLEVQIREHVGRFYEGWMVCDDPACG 1370
Query: 1143 DLTRRCPLGLKTRLC--TTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSD----- 1195
+ TR +G+ R C C + + Y++ QLY QL ++ + D KAL +
Sbjct: 1371 NRTRM--MGVYGRRCLQQGC-RGTVTFEYSDAQLYTQLRYYSSLFDGKKALDAATGARKE 1427
Query: 1196 --TPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ + +E M V+++L+ V+L +LFS
Sbjct: 1428 ELSALVNVQAEFLHA---MSATVDKYLDQCGRRWVNLTQLFS 1466
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 135/588 (22%), Positives = 246/588 (41%), Gaps = 117/588 (19%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDD 104
RA+R++ K +K+A +++ +D G+ K + D ++Y+EV+E +Y V R +DD
Sbjct: 4 RARRERGSKVDKWAEYKRARDGGGRAWKEE----EDVSLYDEVTEDQYKSIVRGRLAKDD 59
Query: 105 WIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVK 164
++ DDG GY+++G DD E++ + E + R K+ + +KGD + + P
Sbjct: 60 FVIDDGVRGYMDNGI----DDFEELEEYAESDECRSGRKS-KLSKSKGDSKTKARSRPKA 114
Query: 165 KKKKEEVQLN----------NDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPT 214
+ +N D +A L++E ++ +K E ++ P+P
Sbjct: 115 PPPEVTTSINAYRPIVSVDQETDFMASLMAEFDSN-------TSKIKEAAKSRKRKPSP- 166
Query: 215 AKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLW 274
A EY S P + + + ++N A+ S + +DDGL
Sbjct: 167 AFEYAEGNSSPNGHDSSVYR-------------RANAYNYRTSYADADASSDGVLDDGLA 213
Query: 275 EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAV-------- 326
DD V+ + K++++ + S + E+++ V S +S
Sbjct: 214 NIPSSDDL--------VMNPKKKIKMESHGVTSAT--ERINKLEVNSAASGTDGGDTSFD 263
Query: 327 -------------ELSTSPP--------------PQVVEKKEHK---------------- 343
EL P P +E K
Sbjct: 264 DIDMDAFMAVDEDELQALTPQKAGLGHFKLESAKPAALEPTNGKYSAQERPKRLDDVPSW 323
Query: 344 CAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLF 403
+ +E++ T P Q T + E FR ++LD E G +YL
Sbjct: 324 LSTYESLSTAPDDQLGQSLRTTNSSKAADISVLEKDGSFRFYWLDYLE----HEGRLYLV 379
Query: 404 GKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVS----------IAQVYSEFD 453
GK K + + SCCV ++N+ R +++LPR ++ + ++ V+S+FD
Sbjct: 380 GKTQDKVSRTWISCCVTIENLQRNLFVLPRERKMEEDDETGKLYETDVVPDMSDVFSDFD 439
Query: 454 QIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSDLSGDTFSHVFG 512
+I I +K + ++++YAF VP S++ +V Y + P LP++ + + +FG
Sbjct: 440 RIRKHAGIKSWKGKFVKRRYAFGEKDVPKGESQWFKVVYGFEEPQLPNNACSPSIARIFG 499
Query: 513 TKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKI 560
T +S E L+L+RKI GP WL+ + + +SWCK E + + I
Sbjct: 500 TSTSAFELLVLKRKIMGPCWLQIKKPQVEHKGVSWCKMETTVSDPKDI 547
>gi|389745369|gb|EIM86550.1| DNA polymerase alpha catalytic subunit [Stereum hirsutum FP-91666
SS1]
Length = 1452
Score = 471 bits (1212), Expect = e-129, Method: Compositional matrix adjust.
Identities = 286/701 (40%), Positives = 408/701 (58%), Gaps = 52/701 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK--------KEGEET 612
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDKQ+G+ ++GEET
Sbjct: 774 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKQWGRKAAQIKVEVDEDGEET 833
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
G+ +K KK Y GGLV EPK+G +DK+I++MDFNSLYPSIIQEYNI FTTI +
Sbjct: 834 GKKSK---NKKDKYKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTTIDRPEAE 890
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
D + + E + V G+LP I LV RRQVK+LMK +L L+Q+DI+Q+ALK
Sbjct: 891 DGEEEKIPEPPED-DVPQGVLPRLIATLVNRRRQVKSLMKDRSLPHAKLLQFDIKQQALK 949
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
LTANSMYGCLGF SRFFA+PLAAL T KGREIL NT+ L E+L +VIYGDTDSL ++
Sbjct: 950 LTANSMYGCLGFEGSRFFARPLAALTTFKGREILTNTRELAESLQLDVIYGDTDSLFVNS 1009
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
NV + KI + K N+ YK LE+D+DGV++ +LLL+KKKYAA+ K+ +G
Sbjct: 1010 NVTELSDALKISAEFKKAVNERYKLLEIDLDGVFQRLLLLQKKKYAAI---KVEDGTRTT 1066
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
+ E+KG+D+ RR++ L+ ++V+ QIL + + ++NIHE++ + T +
Sbjct: 1067 T-EVKGLDMKRREYCALSKSVSQYVLDQILSGE-----PTEVVVENIHEYLTTLSTSIRT 1120
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTS 972
V + I K+L K P++Y D K+ PHVQVA R+ + GD I YI C +G +
Sbjct: 1121 NQVKVEEFIIFKRLGKNPKDYPDAKSQPHVQVAFRMKERLGVDSRAGDVIPYIFCLEGKA 1180
Query: 973 EAAT-------QRAYNIEELKNNS-KLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
+ +RA + EE+K + +LKID YYL+ QI P V RL +PIEGTD R+AE
Sbjct: 1181 TEGSGGKTGQAERARHPEEIKKAAEELKIDYEYYLANQILPPVERLCDPIEGTDRARLAE 1240
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
CLGLD YR + + ++EE G ++ Q D + P + EA T
Sbjct: 1241 CLGLDPGRYRHNV---VGEAEERYFGTLDS-----QVPDSERYKDAEPFIVRCRHCEAHT 1292
Query: 1085 RLSTHG----VVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPG 1140
S G + + P CK P T L +L ++ K I +YYE W C+DP
Sbjct: 1293 AFSPIGDRDSSIVLPSGPTCPACKKPFST--ASLQVQLEAEIRKSIARYYEAWTVCDDPT 1350
Query: 1141 CSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
C + TR+ + + L C + K+ +++ ++Y QL + Y+ D+ KA K+ T +
Sbjct: 1351 CGNRTRQMAVYGRRCLKPGC-RGKVAFEFSDAEMYNQLRYLAYLFDVEKA-AKAAT-GKR 1407
Query: 1201 FDSETYMGYC------KMKQHVERFLESSAYNIVDLKKLFS 1235
D +G +M Q VE++L+ S VD+ LFS
Sbjct: 1408 HDDIVTLGTLQADFLQRMSQAVEKYLDRSGRRWVDMGSLFS 1448
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/549 (25%), Positives = 245/549 (44%), Gaps = 80/549 (14%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDD 104
RA+R + DK K A ++K ++ G G K E AD +Y+ V+E +Y V R Q+DD
Sbjct: 4 RARRDRKDKLAKLAEYKKARE--GGGRTWKDEEEAD--LYDVVTEDQYKSIVKGRLQKDD 59
Query: 105 WIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNK-NIQNPNAKGDIQKLLANMPV 163
+++DDG DGY+++G + + D ++E+HD+R K N ++ +
Sbjct: 60 FVEDDGVDGYMDNGMDDWTGG-GDSQDEEEEHDRRASKKTNGKSKSKPKAKAPPPPAPAP 118
Query: 164 KKKKKEEVQLNND-DVLADLLSEVNTTIAPTLKLNTKTNEIVIPK---------EEPP-- 211
+ V + + D ++ LL +++T P + + P PP
Sbjct: 119 IAAYRPAVSVEQESDFMSALLGDMDTKPVPAASKHASGSRKRKPSPSYRYASRSSSPPRP 178
Query: 212 --------------APTAKEYLANFSKP--IKVEKKIEKPIKKEPSPLKDEIKSNDSVME 255
AP++ + F P V +++ P K+ + EIK M
Sbjct: 179 AYRNGDSSHDPYSDAPSSDGFDNGFEPPSDYDVVERVPSPRKRPRTGEMPEIKPAIEKMG 238
Query: 256 VEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVD 315
+M+V + E+ D +++M + + ++++ + +E K
Sbjct: 239 -KMDVGATTDEDIDYDASFDEMDMSSF-----------------MEVDEEPTVKVEPK-- 278
Query: 316 VTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHS--RTADDSLPLA 373
V+L S P + KKE + W ++ + + + TA + P
Sbjct: 279 ---------PVDLKPSKPAKPETKKEEEHPSWLSVYDSLAVAGDESFGTLNTAAATAPQN 329
Query: 374 TDH----ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
T++ E FR F+LD E G +Y GK K + SCCV V N+ R ++
Sbjct: 330 TNNISALEPDGSFRFFWLDYLE----HEGVLYFIGKTLDKTTKAWVSCCVAVNNLQRNLF 385
Query: 430 LLPR-----SEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DL 483
+LPR E +T + VYS+FDQ+ + I +K++ +++KYAF + VP +
Sbjct: 386 VLPREKRQDGEGYETDVVPGMKDVYSDFDQVRKKAGIKTWKAKFVKRKYAFGVADVPKEE 445
Query: 484 SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS 543
+ +L+V Y P +P+D++ FS VFG+ +S E L+++R+I GP W++ +
Sbjct: 446 TSWLKVVYGFDEPQIPTDVTSPNFSRVFGSNTSAFELLVIKRRIMGPCWIKVQKPHVEHQ 505
Query: 544 RISWCKYEV 552
SWCK EV
Sbjct: 506 GASWCKMEV 514
>gi|328774387|gb|EGF84424.1| hypothetical protein BATDEDRAFT_85131 [Batrachochytrium dendrobatidis
JAM81]
Length = 2388
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 286/739 (38%), Positives = 411/739 (55%), Gaps = 95/739 (12%)
Query: 528 KGPSWLEFPEAEKFPSRISWCKYE--VQCNQMEKIRI-------TNVCGNVLSRTLMGGR 578
K PS+ F +EK + C+++ + C M K+++ TN+ GN+ SR+L G R
Sbjct: 1709 KIPSY--FWNSEKLMEMVQHCEFDTFLTCQLMFKLQVLPLTKQLTNLAGNIWSRSLTGAR 1766
Query: 579 SERNEFLLLHAFHEKSYVLPDKQYGK-------NKKEGEETGEANKGKGRKKAAYSGGLV 631
+ERNE+LLLH FH++ Y+ PDK Y ++ + E TG K GR+KAAY+GGLV
Sbjct: 1767 AERNEYLLLHEFHDRKYITPDKVYSNRVVSNQLDENDAEGTGAVTKKGGRRKAAYAGGLV 1826
Query: 632 LEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTG 691
LEPKKGFYDK+++++DFNSLYPSIIQEYNICFTTI + D P VD G
Sbjct: 1827 LEPKKGFYDKYVLMLDFNSLYPSIIQEYNICFTTIARSYDNNGD---HMPTPPNSSVDRG 1883
Query: 692 ILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFA 751
ILP + LV R+ VK LMK P + L QYDIRQKALKLTANSMYGCLGF N RF+A
Sbjct: 1884 ILPKLLGTLVNRRQLVKGLMKDPKNTPAELAQYDIRQKALKLTANSMYGCLGFVNFRFYA 1943
Query: 752 QPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC 811
+PLA L+T+KGREIL NT L E N +VIYGDTDS+MI N D V +IG ++K
Sbjct: 1944 EPLAMLITSKGREILQNTVDLAEKSNLDVIYGDTDSIMIYTNSTDLAEVKRIGQELKRAV 2003
Query: 812 NKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLAS 871
NK Y LE+++DG ++ MLLLKKKKYAA+ + + +G++ + E KG+D+VRRDW ++
Sbjct: 2004 NKRYNLLEIELDGFFERMLLLKKKKYAAILVEE-KDGQLKRTIETKGLDLVRRDWCGISF 2062
Query: 872 EAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPE 931
+A +V+ QI ++ + ++ ++ IH+++ K+ ++ +G VPL I K LTK PE
Sbjct: 2063 DASNYVLQQI-----FSGETREEAVEQIHQYLNKLGVEVRSGTVPLEKFIINKGLTKNPE 2117
Query: 932 EYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKL 991
EY+D+ +LPHVQVAL L K
Sbjct: 2118 EYSDKNSLPHVQVALAL-----------------------------------------KA 2136
Query: 992 KIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGV 1051
+ D N+YLS Q+HP +TRL + IEGTD R+A+ LGLD + + S + Q +
Sbjct: 2137 RGDFNWYLSNQVHPPITRLCQHIEGTDTARLADSLGLDMTKFSS----TAQSRSFDDTSA 2192
Query: 1052 GEAEEVKYQFCDKFEFTCM---NPSCKQVNTVEAPTRLSTHGVVFVLDECINPEC-KVPP 1107
+ + Q D+ +F + +P C ++ E+ G C NP C + P
Sbjct: 2193 ADIYTFESQISDEEKFKDIKRWSPRC--IHCGESSEFKGADGTAMSGLTCANPMCGQTMP 2250
Query: 1108 YTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHR 1167
+P L +L + + Y + + C+DP C ++T+ + + L C +
Sbjct: 2251 ---IPSLAVQLRVAICAQMRVYLDQSVVCDDPSCLNITKATSVFGRRCLVPGCKGTVFFQ 2307
Query: 1168 VYTELQLYQQLSFFHYICDI---TKALTKSD--------TPSIKFDSETYMGYCKMKQHV 1216
+ ++ LY Q+ +F + DI TK L KS SI + + + Y + Q V
Sbjct: 2308 L-SDRTLYLQMQYFESLFDIPHVTKTLEKSAENDEIANFARSILTRTISDIKY--LGQLV 2364
Query: 1217 ERFLESSAYNIVDLKKLFS 1235
E++L ++A VDL KLFS
Sbjct: 2365 EQYLSTNARRWVDLGKLFS 2383
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 167/601 (27%), Positives = 279/601 (46%), Gaps = 114/601 (18%)
Query: 47 AKRQKIDKTNKFAAFQKLKDLK--GQGVKHKYEFTADENVYEEVSEKEY-TERVLKRQED 103
+ R+ D +K Q+LK+L+ G YE ++++ V+E+EY T R ED
Sbjct: 928 SSRRSADAYSKRQTLQRLKELRESGNTSLRDYEVAGTADIFDVVTEEEYNTLSKRTRLED 987
Query: 104 DWIDDDGGDGYVEDGREIFDD----------DIEDVPQKKEK---------HDKRKKNK- 143
D++ DD G+GY G E +D+ D + + K K +KRK++K
Sbjct: 988 DFVVDDNGEGYANGGLEDWDNPQSGQSSTDEDGDAINTKFNKTKSTGKGGNSEKRKRDKK 1047
Query: 144 NIQNP-NAKGDIQKLLANMPVKKKK----------KEEVQLNNDDVLADLLSEVNTTIAP 192
++ NP I +L+ +K +E QL D +L L V+T
Sbjct: 1048 SLVNPATGSASIVSMLSKQSKASEKSVQKTGDQTLEESTQLL-DSILESLDDVVSTQEEK 1106
Query: 193 TLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDS 252
++++ TNE +A + NFS + + ++++ + + S + KS DS
Sbjct: 1107 RRRVHSTTNEF----------SANTSIDNFSGSLFSKFQLKESLLTKASTVAS--KSFDS 1154
Query: 253 VMEVEMNVAEQSKEEPVDDGLWEQMQIDD--WDNS----------QQTQDVLPEQAKVEL 300
+ + A+ DGL + M D+ +NS Q+ D L + +E+
Sbjct: 1155 AIVGDREYAQ--------DGL-DIMNNDESSANNSPSNRVGVYTNNQSMDTLDLDSAMEV 1205
Query: 301 QIEAIESQSIEEKVDVTNVESV--SSAVEL----STSPPPQVVEKKEHKCAEWEAIQTEP 354
+A + + V VT+ E+V SS V++ +S + + H ++E +
Sbjct: 1206 STQAPLAT---KPVSVTDAETVQKSSQVKIRKLQKSSANSKSAKSAAHFLPKFEQVAVAT 1262
Query: 355 STSEPQVHSRT----------ADDSLPLATDHENKKV------------------FRMFF 386
+ S+P V S T D++ + N++ +M++
Sbjct: 1263 AASQPSVISSTEMAGCVNWKNVKDTVAITNVSSNEESSFIKSNIGQNDILEPDGSLKMYW 1322
Query: 387 LDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK-----TKE 441
D++E + G VYLFGKV+ H SCC++V+NI R +++LPR L T
Sbjct: 1323 FDSYE----KHGIVYLFGKVYQPLTQRHVSCCLVVKNIQRNLFVLPRPIKLDDLGIPTDT 1378
Query: 442 PVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
V++A VY EFD I +++I +F SR + +KYAF LP +P S+YL+V Y P LPSD
Sbjct: 1379 AVTMADVYQEFDTIRQKHQISEFSSRSVSRKYAFELPNIPSESDYLKVLYPFSEPELPSD 1438
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
+SG TFS VFGT++ +E L+L+RK+ GP W+ + +SWCK E + + IR
Sbjct: 1439 ISGKTFSRVFGTRTRAMELLILKRKLMGPCWISIKNVKVSTPMVSWCKLEFIADDPKSIR 1498
Query: 562 I 562
+
Sbjct: 1499 V 1499
>gi|449463959|ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
sativus]
Length = 1547
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 297/689 (43%), Positives = 398/689 (57%), Gaps = 75/689 (10%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKK----------- 607
++TN+ GN+ R+L G R++R E+LLLHAFH K Y++PDK Y K+KK
Sbjct: 830 QLTNISGNLWGRSLQGARAQRVEYLLLHAFHAKKYIVPDKNSSYVKDKKIVKKRTNHGSE 889
Query: 608 ----------EGE-ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSII 656
+G E + GKG+K +Y GGLVLEPK+G YDK+++L+DFNSLYPSII
Sbjct: 890 EKNVDQFDLDDGNVEAPNTDSGKGKKGPSYLGGLVLEPKRGLYDKYVLLLDFNSLYPSII 949
Query: 657 QEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
QEYNICFTT+ + + LP +V TG+LP +K LV+ RR VK+ MK N
Sbjct: 950 QEYNICFTTV------ERSPDGVIPPLPSSRV-TGVLPELLKNLVQRRRMVKSWMK--NA 1000
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-N 775
S L Q DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T++GREIL +T LV+ N
Sbjct: 1001 SGLKLQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITSQGREILQSTVDLVKNN 1060
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
L+ EVIYGDTDS+MI ++D V I ++ E NK YK LE+D+DG+YK MLLLKKK
Sbjct: 1061 LSLEVIYGDTDSIMIHSGLDDVGKVKAIAGKVIQEVNKKYKCLEIDLDGLYKRMLLLKKK 1120
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYAA+ + + +G E KG+D+VRRDWS L+ E G F ++QIL + S +D
Sbjct: 1121 KYAAVKL-QFKDGMPYEVIERKGLDMVRRDWSLLSKELGDFCLNQIL-----SGGSCEDV 1174
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN-SK 954
+++IH+ + KI+ D+ G V L ITK LTK PE Y D + PHVQVA RL +
Sbjct: 1175 VESIHDSLMKIQEDMRKGQVALEKYIITKTLTKPPEAYPDARNQPHVQVAQRLKQMGYTT 1234
Query: 955 KLKQGDTISYIIC-----EDGTSEAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVT 1008
GDTI YIIC G S QRA + +ELK + K ID+ YYLSQQIHPVV+
Sbjct: 1235 GCSVGDTIPYIICCEQESTSGGSTGIAQRARHPDELKKEDGKWMIDIEYYLSQQIHPVVS 1294
Query: 1009 RLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFT 1068
RL I+GT R+A+CLGLD+S ++++ E + L +E +YQ C FT
Sbjct: 1295 RLCASIQGTSPERLADCLGLDSSKFQNRSIEVSRSDISTSLLCSVNDEERYQGCTPLTFT 1354
Query: 1069 CMNPSCKQVNTVEAPT--------------RLSTHGVVFVLDECINPEC--KVPPYTYLP 1112
C PSC T P RL + P+C + P
Sbjct: 1355 C--PSCS--GTFNCPPIFSSIYKSAEGKQERLVDEPTTKFWNNLRCPKCPDEANAGRITP 1410
Query: 1113 HLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-----K 1164
+I N++ + +++I YY G + C+D C TR L + + T C Y
Sbjct: 1411 GMIANQVKRQADRFISMYYNGLMMCDDETCKYATRAVNLRVMGDSEKGTICPNYPHCNGH 1470
Query: 1165 LHRVYTELQLYQQLSFFHYICDITKALTK 1193
L R YTE LY+QLS+F +I D + + K
Sbjct: 1471 LVRKYTEADLYKQLSYFSHILDTERCMEK 1499
Score = 126 bits (317), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 125/234 (53%), Gaps = 31/234 (13%)
Query: 345 AEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIY-KQPGTVYLF 403
AEW+A+++E S S + A++ TD + F + +DA E+++ GTVYLF
Sbjct: 330 AEWQAVRSEGSGSVNSA-AEMAEEKSEFDTDTDGSLPF--YIVDAHEELFGANMGTVYLF 386
Query: 404 GKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE-----------PVSIAQVYSEF 452
GKV K ++ SCCV+V+N+ R IY +P + L + E +S A + ++
Sbjct: 387 GKV--KAGDTFHSCCVVVKNMQRCIYAIPSASFLHSDEMLELQKDAEESQLSPADLRAKL 444
Query: 453 DQIATQYK------ILD-----FKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALPS 500
++ K +LD F +++KYAF +P Y +++ Y K P LP+
Sbjct: 445 QEVTAGLKNEMAKQLLDLNVSTFSMTPVKRKYAFERQDIPAGENYVIKINYPFKHPPLPA 504
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEV 552
DL G+ F + GT S LE LL++RKIKGPSWL + P+ R+SWCK+EV
Sbjct: 505 DLKGELFCALLGTHRSALELLLIKRKIKGPSWLSISKFSSRPASQRVSWCKFEV 558
>gi|449548212|gb|EMD39179.1| hypothetical protein CERSUDRAFT_112852 [Ceriporiopsis subvermispora
B]
Length = 1462
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 281/695 (40%), Positives = 400/695 (57%), Gaps = 45/695 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE------ETGE 614
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK YGK E E G+
Sbjct: 789 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKLYGKKAATAEKADAQDEDGD 848
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
K K+ Y GGLV EPK+G +DKFI++MDFNSLYPSIIQEYNI FTT+ + +D
Sbjct: 849 GKKTSKSKRDKYKGGLVFEPKRGLWDKFILVMDFNSLYPSIIQEYNIDFTTVD-KAEEDD 907
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
D P +V G+LP I LV RRQVKALMK + LMQ+DI+Q ALKLT
Sbjct: 908 DGEEKIPEPPSSEVAQGVLPRLIATLVSRRRQVKALMKDKKATQAQLMQWDIKQIALKLT 967
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF SRF+A+PLAAL T KGREIL +T+ L E+L +V+YGDTDS+ ++ NV
Sbjct: 968 ANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFVNSNV 1027
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
D KI + +K N YK LE+D+DG+++ +LLL+KKKYAA+ + + +GK S
Sbjct: 1028 TDLAEALKISSDLKKAVNDRYKLLEIDLDGIFQRLLLLQKKKYAAVKVEQ--DGK--TST 1083
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E+KG+D+ RR++ L+ A ++++ QIL + + + ++ IHE++ + D+ G
Sbjct: 1084 EVKGLDMKRREYCALSKAASQYILEQILSGE-----ATETVVERIHEYLMTLGEDVRAGK 1138
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDGTS 972
+ L I K+L K PE+Y D K PHVQVALR+ + GD + YI C EDG +
Sbjct: 1139 IKLDEFIIFKRLGKNPEDYPDAKNQPHVQVALRM-KARGGSARSGDVVPYIFCVGEDGEA 1197
Query: 973 EAATQ--RAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
+TQ +A + +E++ S+ KID YYL+ QI P + RL +PIEGTD R+AECLGLD
Sbjct: 1198 SKSTQADKAKHPDEVRRAGSEAKIDYEYYLAHQILPPIERLCDPIEGTDRARLAECLGLD 1257
Query: 1030 TSLYRSQIKESIQQSEENILGVGE---AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL 1086
+ Y+S ++EE G + ++ +++ D F C SC+ E+
Sbjct: 1258 PNRYKSS-----GEAEERQFGTLDSLMSDAERFKDTDPFIVQCR--SCQGEIVFESIANR 1310
Query: 1087 STHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
T + C P C+ L +L + ++I KYYE W C+DP C + TR
Sbjct: 1311 DTSLLRPSGPTC--PGCQ--NQMGAASLQVQLEAQIREHINKYYESWTVCDDPTCGNRTR 1366
Query: 1147 RCPLGLKTRLC--TTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL---TKSDTPSIKF 1201
+G+ R C C Y + QLY QL F+ + D+ KAL T + I+
Sbjct: 1367 --IMGVYGRRCLRNGCRGLVAFE-YNDAQLYNQLRFYASLFDVDKALKSTTGARADEIRA 1423
Query: 1202 DSETYMGYCK-MKQHVERFLESSAYNIVDLKKLFS 1235
++ + + M V ++L+ V+L LFS
Sbjct: 1424 LADVQGDFFRAMLAAVNKYLDQCGRRWVELSGLFS 1458
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 15/187 (8%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
E R F+LD E G +Y GK K + SCCV V+N+ R +++LPR
Sbjct: 349 EQDGSLRFFWLDYLE----HDGRLYFTGKAQDKTTKAWLSCCVTVENLQRNLFVLPRERR 404
Query: 437 LKTKEPVS----------IAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSE 485
++ E + +Y++FD+I + I +K++ +++KYAF VP S+
Sbjct: 405 IEEDEMTGEVYETDVVPELTDIYNDFDRIRKKANIKKWKAKFVKRKYAFGEKDVPKGESQ 464
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI 545
+L+V Y P LP++LS + VFGT +S E L+L+RKI GP WL+ + +
Sbjct: 465 WLKVVYGFDEPQLPNNLSSPNIARVFGTNTSAFELLVLKRKIMGPCWLQIKKPVLDTKGV 524
Query: 546 SWCKYEV 552
SWCK E
Sbjct: 525 SWCKVEA 531
>gi|359480801|ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
vinifera]
Length = 1522
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 300/691 (43%), Positives = 410/691 (59%), Gaps = 81/691 (11%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK----------------QYGKN 605
+TN+ GN+ +TL G R++R E+LLLH FH K Y++PDK Q G
Sbjct: 806 LTNISGNLWGKTLQGARAQRVEYLLLHEFHAKKYIVPDKISSHLRETKWTKRRMNQGGAE 865
Query: 606 KKEGEE-----------TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPS 654
+ +E N+GKG+K AYSGGLVLEPK+G YDK+I+L+DFNSLYPS
Sbjct: 866 DRNIDELDVDDAHVENDAHHNNQGKGKKGPAYSGGLVLEPKRGLYDKYILLLDFNSLYPS 925
Query: 655 IIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP 714
IIQEYNICFTT V D + L P + TG+LP +KKLVE R+ VK+ +K
Sbjct: 926 IIQEYNICFTT--VERSPDGSVPRL----PSSKT-TGVLPELLKKLVERRKTVKSRLK-- 976
Query: 715 NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE 774
S + Q DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL +T LV+
Sbjct: 977 TASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQ 1036
Query: 775 N-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
N LN EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLK
Sbjct: 1037 NNLNLEVIYGDTDSIMIYTGLDDITKAKAIAGKVIQEVNKKYRCLEIDLDGLYKRMLLLK 1096
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KKKYAA+ + + +G E KG+D+VRRDWS L+ E G F +SQIL + S +
Sbjct: 1097 KKKYAAVKL-QFKDGTPYEVIERKGLDMVRRDWSLLSKELGDFSLSQIL-----SGGSCE 1150
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN- 952
D +++IH + K++ D+ NG V L ITK LTK PE Y D+ PHVQVALRL +
Sbjct: 1151 DVVESIHNSLMKVQEDMRNGEVALEKYIITKSLTKPPEAYPDKNQ-PHVQVALRLKQSGY 1209
Query: 953 SKKLKQGDTISYIIC-EDGTSEAAT----QRAYNIEELK-NNSKLKIDVNYYLSQQIHPV 1006
S GDT+ YIIC E GTS ++ QRA + +ELK +N K ID++YYL+QQIHPV
Sbjct: 1210 STGCSAGDTVPYIICCEQGTSSGSSTGIAQRARHPDELKRDNGKWMIDIDYYLAQQIHPV 1269
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFE 1066
V+RL I+GT R+A+CLGLD+S ++S+ E+I + + + A+E +Y+ C+
Sbjct: 1270 VSRLCASIQGTSPARLADCLGLDSSKFQSRRSEAINN--DFSISLLSADEERYRGCEHLI 1327
Query: 1067 FTCMNPSCKQVNTVEAPTRL-STHGVV------FVLDECIN-------PEC--KVPPYTY 1110
+C PSC T + PT S H + ++E N P+C +
Sbjct: 1328 LSC--PSC--FGTFDCPTLFNSVHTSITEKSTQVQVEESNNFWQRLRCPKCPEEGDVGRM 1383
Query: 1111 LPHLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY---- 1163
P LI N++ + + +I YY+G + C+D C T L + + T C Y
Sbjct: 1384 SPALIANQVKRQADGFISMYYKGSMMCDDETCKHTTNSLNLRVIGDSERGTVCPNYPRCN 1443
Query: 1164 -KLHRVYTELQLYQQLSFFHYICDITKALTK 1193
+L R YTE LY+QLS+F ++ D + + K
Sbjct: 1444 GRLVRKYTEADLYKQLSYFCHVLDTVRCIEK 1474
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 142/574 (24%), Positives = 245/574 (42%), Gaps = 93/574 (16%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKH---KYEFTADENVYEEVSEKEYTERVLKR 100
GR + + + T + A Q+LK L+ G + ++ ++ +Y+ V E EY + V KR
Sbjct: 9 AGRRRSRGAEATARSDALQRLKALRRGGRRSDGVGFQIKVEDPIYDTVDEDEYDKLVAKR 68
Query: 101 QED--DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPN--------- 149
+E+ +I DD G GY ++G+E D + VP ++ D + +
Sbjct: 69 REEFRGFIVDDNGSGYGDEGQE-EDWSLAGVPPSSDESDGEAERPKKKKTEKKDPPPKKP 127
Query: 150 ----------AKGDIQKLLANMPVKKKKKEEVQ-LNNDDVLADLLSEVNTTIAPTLKLNT 198
K + + + KK + ++V+ L+ D ++ D+++E A +
Sbjct: 128 SPLSAAAAMMGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRERRRR 187
Query: 199 KTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEM 258
+ +V NF ++ +I PI P P K I DSV
Sbjct: 188 GQSGLVSGGR------------NFVPGTTIKMEIS-PISIRPEPTKVTIADGDSV----- 229
Query: 259 NVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQA--KVELQIEAIESQSIEEKVDV 316
+ + Q+ G+ ++ + + N ++ +P+ K E ++ E S+ K+
Sbjct: 230 SSSMQNGNMVEGKGVVKESKDANDLNCDAVEETVPDAVEDKSEQAVKRKEVHSLNAKIKE 289
Query: 317 TNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTS--EPQVHSRTADDSLPLAT 374
++S+A + Q V + A +E PS + E +D SLP
Sbjct: 290 EKDLTLSAA-----TAGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDGSLPF-- 342
Query: 375 DHENKKVFRMFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
+ LDA E+ Y G +YLFGKV K +++ SCCV+V+N++R +Y +P
Sbjct: 343 ----------YILDAHEEFYGANMGNLYLFGKV--KAGSAYHSCCVVVKNMERCVYAIPN 390
Query: 434 SEHLKTKE-----------PVSIAQVYSEFDQIATQYK-----------ILDFKSRKIEK 471
E VS A + ++ +A+ K + F +++
Sbjct: 391 DSVFGNDEIMRLEKDIEASRVSPAALRTKLQDVASGLKNEIAKQLLNLNVSTFSMTPVKR 450
Query: 472 KYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGP 530
YAF +P Y L++ Y K P LP+DL G+ F + GT S LE L++RKI GP
Sbjct: 451 SYAFERADIPVGENYVLKINYPFKDPPLPADLKGEAFCALLGTHCSALELFLIKRKIMGP 510
Query: 531 SWLEFPEAEKFPS--RISWCKYEVQCNQMEKIRI 562
WL + P+ R+SWCK+EV + + IRI
Sbjct: 511 YWLSISKFSSCPAPERVSWCKFEVTVDCPKDIRI 544
>gi|224015515|ref|XP_002297409.1| hypothetical protein THAPSDRAFT_bd439 [Thalassiosira pseudonana
CCMP1335]
gi|220967910|gb|EED86279.1| hypothetical protein THAPSDRAFT_bd439 [Thalassiosira pseudonana
CCMP1335]
Length = 1141
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 280/666 (42%), Positives = 407/666 (61%), Gaps = 54/666 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE--GEETGEANKG 618
++TN+ GN+ +RT+ G R+ERNE+LLLH FH Y++P+K+ K + E GEE G +N
Sbjct: 439 QLTNIAGNLWARTMKGNRAERNEYLLLHEFHNLKYLVPEKRTAKQRSEELGEEGGASNG- 497
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRML 671
KA YSGGLVLEPKKG YD FI+L+DFNSLYPS+IQEYN+CFTT+ P +
Sbjct: 498 ----KAKYSGGLVLEPKKGLYDSFILLLDFNSLYPSLIQEYNLCFTTMEWSKSNAPAN-V 552
Query: 672 QDSDITTLCEY--LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQK 729
+ ++ + LP+ + G+LP IK LV+ RR VK +K +++ + +IRQ+
Sbjct: 553 EGGEVPQGDQLPPLPDEGLKRGVLPRVIKTLVDRRRNVKKFLKTEK-NAEKKEELNIRQQ 611
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLNYEVIYGDTDSL 788
ALKLTANSMYGCLGF +SRF+AQP+AALVTA GRE L T L + ++ EVIYGDTDS+
Sbjct: 612 ALKLTANSMYGCLGFSHSRFYAQPIAALVTAMGRETLQRTVDLAQTSIGLEVIYGDTDSI 671
Query: 789 MISC---NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
MI+ +VN+Y V ++GNQ+K E NKLY LEL+IDGV++ MLLLKKKKYAA+++++
Sbjct: 672 MINTRITDVNEYPRVLELGNQVKREVNKLYNTLELEIDGVFRSMLLLKKKKYAAVTMAEG 731
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
GKMI +E+KG+D+VRRDW + E+GKFV+ QIL + + + NIH+H++K
Sbjct: 732 PGGKMIFDKEMKGLDLVRRDWCIQSKESGKFVLDQILSGEEK-----EVVVSNIHDHLEK 786
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
+ + +G +PL ITK L K P EY D K+LPHV VA ++ + K + GD I Y+
Sbjct: 787 VAQQMRSGELPLDKYIITKGLNKHPNEYPDAKSLPHVYVA-KMMLKDHKAVSIGDHIPYV 845
Query: 966 ICE-------DGTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
I E A +RA + +E+ ++N +K DV +YL+QQI P ++RL EPIEGT
Sbjct: 846 ITELEKEEEPSNKKTLAAERARHPDEIERSNGAMKPDVEWYLTQQILPPISRLCEPIEGT 905
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEA----EEVKYQFCDKFEFTCMNPS 1073
+AE LGLD+S Y + + +I E++I+ A +E +++ +K TC
Sbjct: 906 SPGILAEKLGLDSSKYNNIVSANI--DEDDIVDYTPASCLPDEERFKDVEKLVVTC--SG 961
Query: 1074 CKQVNTVEAPTRL-STHGVVFVLD--ECINPECKVPPY------TYLPHLINKLSQDMNK 1124
C + RL +GV + C NP C P + + + ++N+++ +
Sbjct: 962 CNESAEFPGVFRLVKENGVSYCASGMSCPNPVCGRPNWGDADLESCIAKILNRMNLMKKE 1021
Query: 1125 YIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYI 1184
YY+G ++C+DP C+ TR+ + L C+ ++ VYTE L QL +F +
Sbjct: 1022 QQKLYYDGLVRCDDPMCNLETRQLSVYEGCCLKAGCNG-RMKTVYTESSLQTQLKYFDSL 1080
Query: 1185 CDITKA 1190
DI A
Sbjct: 1081 FDIDHA 1086
Score = 103 bits (256), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 20/184 (10%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENN----SHSSCCVIVQNIDRKIYLLPRSEHL-- 437
MF+LDA E + G VYL+GKV + + + SCCV V N R +++LPR +
Sbjct: 5 MFWLDAAE----RNGVVYLYGKVRIPSKDPSKQKYQSCCVTVPNNQRNLFVLPRVKSTNP 60
Query: 438 -KTKEPVSIAQVYSEFDQIATQYKI-----LDFKSRKIEKKYAFNLPGVP-DLSEYLEVR 490
+ +E I VY+E + T I ++ +K+ + YAF P +P +YL+V+
Sbjct: 61 DEGQERYGIMDVYNEIKSVLTPSCIPHTEGSNWAGKKVTRSYAFEDPSIPRGECDYLKVK 120
Query: 491 YSAKCPALPSDL---SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISW 547
Y K P D+ G +F + G +S LEN LL+R + GP W+ + ISW
Sbjct: 121 YDGKYPVPNRDVCVNGGKSFEKILGAGASNLENFLLKRDLMGPQWVRIYNPKSIGGSISW 180
Query: 548 CKYE 551
CK+E
Sbjct: 181 CKWE 184
>gi|449518250|ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
[Cucumis sativus]
Length = 1027
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 297/689 (43%), Positives = 398/689 (57%), Gaps = 75/689 (10%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKK----------- 607
++TN+ GN+ R+L G R++R E+LLLHAFH K Y++PDK Y K+KK
Sbjct: 310 QLTNISGNLWGRSLQGARAQRVEYLLLHAFHAKKYIVPDKNSSYVKDKKIVKKRTNHGSE 369
Query: 608 ----------EGE-ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSII 656
+G E + GKG+K +Y GGLVLEPK+G YDK+++L+DFNSLYPSII
Sbjct: 370 EKNVDQFDLDDGNVEAPNTDSGKGKKGPSYLGGLVLEPKRGLYDKYVLLLDFNSLYPSII 429
Query: 657 QEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
QEYNICFTT+ + + LP +V TG+LP +K LV+ RR VK+ MK N
Sbjct: 430 QEYNICFTTV------ERSPDGVIPPLPSSRV-TGVLPELLKNLVQRRRMVKSWMK--NA 480
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-N 775
S L Q DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T++GREIL +T LV+ N
Sbjct: 481 SGLKLQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITSQGREILQSTVDLVKNN 540
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
L+ EVIYGDTDS+MI ++D V I ++ E NK YK LE+D+DG+YK MLLLKKK
Sbjct: 541 LSLEVIYGDTDSIMIHSGLDDVGKVKAIAGKVIQEVNKKYKCLEIDLDGLYKRMLLLKKK 600
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYAA+ + + +G E KG+D+VRRDWS L+ E G F ++QIL + S +D
Sbjct: 601 KYAAVKL-QFKDGMPYEVIERKGLDMVRRDWSLLSKELGDFCLNQIL-----SGGSCEDV 654
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN-SK 954
+++IH+ + KI+ D+ G V L ITK LTK PE Y D + PHVQVA RL +
Sbjct: 655 VESIHDSLMKIQEDMRKGQVALEKYIITKTLTKPPEAYPDARNQPHVQVAQRLKQMGYTT 714
Query: 955 KLKQGDTISYIIC-----EDGTSEAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVT 1008
GDTI YIIC G S QRA + +ELK + K ID+ YYLSQQIHPVV+
Sbjct: 715 GCSVGDTIPYIICCEQESTSGGSTGIAQRARHPDELKKEDGKWMIDIEYYLSQQIHPVVS 774
Query: 1009 RLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFT 1068
RL I+GT R+A+CLGLD+S ++++ E + L +E +YQ C FT
Sbjct: 775 RLCASIQGTSPERLADCLGLDSSKFQNRSIEVSRSDISTSLLCSVNDEERYQGCTPLTFT 834
Query: 1069 CMNPSCKQVNTVEAPT--------------RLSTHGVVFVLDECINPEC--KVPPYTYLP 1112
C PSC T P RL + P+C + P
Sbjct: 835 C--PSCS--GTFNCPPIFSSIYKSAEGKQERLVDEPTTKFWNNLRCPKCPDEANAGRITP 890
Query: 1113 HLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLK--TRLCTTCHKY-----K 1164
+I N++ + +++I YY G + C+D C TR L + + T C Y
Sbjct: 891 GMIANQVKRQADRFISMYYNGLMMCDDETCKYATRAVNLRVMGDSEKGTICPNYPHCNGH 950
Query: 1165 LHRVYTELQLYQQLSFFHYICDITKALTK 1193
L R YTE LY+QLS+F +I D + + K
Sbjct: 951 LVRKYTEADLYKQLSYFSHILDTERCMEK 979
Score = 47.4 bits (111), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 518 LENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEV 552
LE LL++RKIKGPSWL + P+ R+SWCK+EV
Sbjct: 2 LELLLIKRKIKGPSWLSISKFSSRPASQRVSWCKFEV 38
>gi|388857734|emb|CCF48628.1| related to POL1-DNA-directed DNA polymerase alpha, 180 KD subunit
[Ustilago hordei]
Length = 1670
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 278/727 (38%), Positives = 395/727 (54%), Gaps = 118/727 (16%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-------- 612
++TN+ GN ++TL GGR+ERNE++LLH FH + Y+ PDK KK+ ++
Sbjct: 900 QLTNLAGNSWNKTLNGGRAERNEYILLHDFHRQKYICPDKISAWEKKQIQQAAELKAKAK 959
Query: 613 ----GEANKGKGR----KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
G N KK + GGLV EPK+G +DK+I++MDFNSLYPSIIQE+NI FT
Sbjct: 960 AKNAGGVNNAAASVVSSKKDKFKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEFNIDFT 1019
Query: 665 TI---PVRMLQDSDITTLCEY-------------------------LPEHQVDTGILPSE 696
T+ P + L+D I+ +P VD G+LP
Sbjct: 1020 TVERPPTQGLEDEGISASSTAAATGEDGSDSTFPTAAAVDVDKIPDIPSSDVDQGVLPRI 1079
Query: 697 IKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAA 756
I +LV RRQVK+LMK + ++ LMQ++I+Q ALKLTANSMYGCLGF NSRF+A+PLAA
Sbjct: 1080 IAQLVARRRQVKSLMKDKSATASQLMQWNIKQLALKLTANSMYGCLGFENSRFYARPLAA 1139
Query: 757 LVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK 816
L T KGREIL TK L E++ +VIYGDTDS+MI+ N +Y +IG + K N+ Y+
Sbjct: 1140 LTTFKGREILTATKDLAESMLLDVIYGDTDSVMINTNATEYKEALRIGQEFKKSVNERYR 1199
Query: 817 QLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKF 876
LE+DIDGV++ MLLL+KKKYAA+ + + +GK + EIKG+D+ RR++ L+ +
Sbjct: 1200 LLEIDIDGVFERMLLLQKKKYAAVLVDE--DGKR--TTEIKGLDMKRREYCALSKNVSNY 1255
Query: 877 VISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDR 936
V+ QIL Q + +++IHE++ + T + G V L L I K+L K PE+Y D
Sbjct: 1256 VLDQILSGQ-----PTEIVVEHIHEYLSAMSTKIKTGEVALDDLIIYKRLGKNPEDYPDV 1310
Query: 937 KALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDGTSEAAT---QRAYNIEELKN-NSK 990
K+ PHVQVALR+ + GD I YI C EDG+S + T +RA++ +EL+ +S+
Sbjct: 1311 KSQPHVQVALRMKQRGGSA-RMGDVIPYIFCLGEDGSSSSKTAQAERAHHPDELRRKDSE 1369
Query: 991 LKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILG 1050
LK+D +YL+ Q+ P V RL E IEGTD R+AECLGLD + Y S S +G
Sbjct: 1370 LKVDYEHYLALQLLPPVERLCESIEGTDRSRLAECLGLDPTKY----SHSTTSSAGAGVG 1425
Query: 1051 VGEAE----------EVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDE--- 1097
GE E +V++ C+ TC PSC+Q +T P T +L +
Sbjct: 1426 AGETEFATLDSQIPDQVRFAQCEPLTLTC--PSCRQRSTFLGPAHRPTSTTPRILTDATN 1483
Query: 1098 ---------------CINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
C N C +P L + +L + +I +YY GW +C D C+
Sbjct: 1484 TKEETRNAISTSGIRCTNATCSLP--LPLATVTIQLELSIRTHISRYYAGWTECSDRNCA 1541
Query: 1143 DLTRRCPLGLKTRLCTTCH--------------------KYKLHRVYTELQLYQQLSFFH 1182
TR + + C H + ++ VY + QLY QL +
Sbjct: 1542 SRTRMA--SVYAKRCLAVHDSKSAALLDATSNTGSHLACRGRVEPVYKDKQLYDQLVYLE 1599
Query: 1183 YICDITK 1189
+ D+ +
Sbjct: 1600 SLFDVGR 1606
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 123/235 (52%), Gaps = 22/235 (9%)
Query: 345 AEWEAIQT------EPSTSEP-------QVHSRTADDSLPLATDHENKKVFRMFFLDAFE 391
+ W+ + T EP+T P ++ + A S E K ++LD E
Sbjct: 420 SSWQKVHTDLMKNVEPATPTPAAANGATKIATGNATPSAGKVKAFEQDKSLFFYWLDYLE 479
Query: 392 DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQ 447
+ G VYL GKV K++ + SCC+ V I+R I+LLPRS+ + T V +
Sbjct: 480 G---ENGVVYLVGKVKDKDSGRYVSCCLTVNGIERCIFLLPRSKLFENTHETDRVVGEDE 536
Query: 448 VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTF 507
+Y EF+ ++ ++ I F S+ + +KYAF GVP S Y+++RY P LP D G TF
Sbjct: 537 IYDEFEDLSAKHGIKRFLSKWVTRKYAFEQAGVPAESNYMKIRYGFDEPQLPFDFKGRTF 596
Query: 508 SHVFGTKSSFLENLLLERKIKGPSWLEFPEAE--KFPSRISWCKYEVQCNQMEKI 560
S FGT +S E L+++R+I GPSWL+ A + + ISWCK EV + + I
Sbjct: 597 SKAFGTNTSPFELLVVKRRIFGPSWLKIQNASIAEGSTPISWCKMEVSIDDPKDI 651
Score = 41.6 bits (96), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 51 KIDKTNKFAAFQKLKD-LKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDD 108
K K N AA + +D L D+ +Y++VSE EY + R ++D+I+D
Sbjct: 4 KAKKLNALAALKAKRDGLAPTNATSADLSDDDDAIYDQVSEDEYRSILRGRIMDNDFIED 63
Query: 109 DGGDGYVEDGREIFDD----------DIEDVPQKKEKHDKRKKNKNIQ 146
D G GYV+ G++ +DD D E+ + E+ KRK K +
Sbjct: 64 DDGSGYVDHGQDEWDDRVRGDDDEDQDTENEQEYFERTGKRKPKKGTK 111
>gi|392565173|gb|EIW58350.1| hypothetical protein TRAVEDRAFT_58647 [Trametes versicolor FP-101664
SS1]
Length = 1457
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 278/701 (39%), Positives = 404/701 (57%), Gaps = 54/701 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN-------KKEGEET- 612
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK YGK +KE E+
Sbjct: 781 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYLCPDKLYGKKAATAVKAEKEDEDAE 840
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
G K K+ Y GGLV EPK+G +DK+I++MDFNSLYPSIIQEYNI FTT V ++
Sbjct: 841 GAGTKATKGKRDKYKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTT--VEAVE 898
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
D D P +V G+LP I LV RRQVK+LMK ++ L+Q+DI+Q ALK
Sbjct: 899 DEDGEEKIPEPPSSEVALGVLPRLIATLVNRRRQVKSLMKDKKATAGQLLQWDIKQMALK 958
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
LTANSMYGCLGF SRF+A+PLAAL T KGREIL +T+ L E++ +V+YGDTDS+ ++
Sbjct: 959 LTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAESMQLDVVYGDTDSVFVNS 1018
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
NV D KI + K N YK LE+D+DG+++ +LLL+KKKYAA+ K+ +G
Sbjct: 1019 NVTDLAEALKISAEFKKAVNDRYKLLEIDLDGIFQRLLLLQKKKYAAV---KVEDGTR-T 1074
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
S E+KG+D+ RR++ L+ +FV+ QIL + + ++ ++NIHE++ + ++
Sbjct: 1075 STEVKGLDMKRREYCALSKTVSQFVLEQILSGE-----ATENVVENIHEYLSTVSENVRA 1129
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDG 970
G + L + K+L K PE+Y D K+ PHVQVALR+ + GD I Y+ C E G
Sbjct: 1130 GKIKLDEFIVFKRLGKNPEDYPDAKSQPHVQVALRM-KARGITARAGDVIPYVFCLGEGG 1188
Query: 971 TSEAATQ--RAYNIEELKNNS-KLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
S Q +A + +E++ S KLKID +YLSQQI P + RL EPIEGTD R+AECLG
Sbjct: 1189 ESSKTAQADKAKHPDEVRRESDKLKIDYEHYLSQQILPPIERLCEPIEGTDKSRLAECLG 1248
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAP---- 1083
LD + YR+ ++ L ++ ++Q D F C SC T AP
Sbjct: 1249 LDPNRYRTSAGGDAEERYFGTLDSLMSDAERFQDTDPFVVRCR--SCNGDVTF-APFADR 1305
Query: 1084 --TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ + + GV+ C +C+ + + +L + +I +YYE W C+DP C
Sbjct: 1306 EKSPIKSAGVM-----CT--QCRGE--LSVASVQTQLEVQIRTHIARYYESWTVCDDPTC 1356
Query: 1142 SDLTRRCPLGLKTRLC--TTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR +G+ R C C + + Y++ QLY QL ++ + D +A S +P+
Sbjct: 1357 GNRTRM--MGVYGRRCLRPGC-RGAVSFEYSDAQLYNQLRYYFSLFDAERA-KNSASPAT 1412
Query: 1200 KFDSETYMGYCK-----MKQHVERFLESSAYNIVDLKKLFS 1235
D + G MK V+++++ + + LFS
Sbjct: 1413 IADIKVVEGLRSEFLDMMKGTVDKYMDQCGRRWIQMSALFS 1453
Score = 106 bits (265), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 357 SEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSS 416
S P +RTA + L+ E+ + R ++LD E G +Y GK K+ + S
Sbjct: 323 SGPTTPARTAAPT-NLSVLEEDGSL-RFYWLDYLE----HDGKLYFIGKTQDKKTKTWVS 376
Query: 417 CCVIVQNIDRKIYLLPRSEHLKTKEPVS----------IAQVYSEFDQIATQYKILDFKS 466
V V+N+ R +++LPR ++ E + ++YS+FD++ + I FK
Sbjct: 377 ISVTVENLQRNLFVLPRERRMEEDEDTGEMYETDQVPELPEIYSDFDRLRRKAGIKAFKG 436
Query: 467 RKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLER 525
+ +++KYAF VP + ++L+V Y P LP+ S FS +FGT +S E L+L+R
Sbjct: 437 KFVKRKYAFGEKDVPREEKQWLKVVYGFNEPQLPNTASSPNFSRIFGTNTSAFELLVLKR 496
Query: 526 KIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKI 560
KI GP WL+ E +SWCK E + + I
Sbjct: 497 KIMGPCWLQVKHPEIDNKGVSWCKVEATVSDPKDI 531
Score = 45.4 bits (106), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDD 104
RA+R+K K +K A ++ + +G Y+ D+ +Y+EV+E +Y V R +DD
Sbjct: 4 RARREKQAKLSKLAELKRAR----EGGGRSYKVEEDDRLYDEVTEDQYKSVVRGRLAQDD 59
Query: 105 WIDDDGGDGYVEDGREIF 122
++ DDG GY++ G + F
Sbjct: 60 FVVDDGVGGYMDTGVDDF 77
>gi|347833010|emb|CCD48707.1| similar to DNA polymerase alpha catalytic subunit [Botryotinia
fuckeliana]
Length = 1471
Score = 461 bits (1187), Expect = e-126, Method: Compositional matrix adjust.
Identities = 285/709 (40%), Positives = 411/709 (57%), Gaps = 42/709 (5%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K
Sbjct: 780 IAALALKVQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKAVFK 838
Query: 605 NKKE-GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
K++ EE + G +KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICF
Sbjct: 839 GKQQVEEENADEENGDVKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICF 898
Query: 664 TTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
TT+ R+ +D + E +P+ Q D GILP I LV RRQVK+LMK + +S+ L
Sbjct: 899 TTVD-RLNLSNDEDRVPE-VPKDQ-DQGILPKLIATLVSRRRQVKSLMKDKHATSEQLAT 955
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYG 783
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYG
Sbjct: 956 WDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKDLAESKSLQVIYG 1015
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
DTDS+MI+ NV++ +GN K N LY+ LE+DID V++ +LL KKKYAA+++
Sbjct: 1016 DTDSVMINANVDNIQDALAVGNDFKKSVNDLYRLLEIDIDNVFRRILLQAKKKYAAINLV 1075
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
++ +GK I E+KG+D+ RR++ L+ E V SQ+L+E D S + + IH+++
Sbjct: 1076 QV-DGKFIDKMEVKGLDMKRREYCNLSKE----VSSQLLNEILSGDDS-EAVITRIHDYL 1129
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTIS 963
++I T + G VP+ I +L KAP++Y + +P VQVALR K++++ D I+
Sbjct: 1130 REISTKMREGNVPVQKYTIYTKLGKAPKDYPNADNMPQVQVALR-ELAKGKQVRKDDVIA 1188
Query: 964 YIICEDG-TSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
YI+ +G TSE A +R++ ++ +K +S LK DV +YL +QI P V RL I GTD VR
Sbjct: 1189 YIVTGEGKTSENAAKRSFTPQDVMKRDSGLKPDVEWYLYKQIFPPVERLCANISGTDTVR 1248
Query: 1022 IAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVE 1081
+A+CLGLD Y S +E I + + +F D T SCK V E
Sbjct: 1249 LADCLGLDARKYSINNNNSAGNNEAEIHPLESQIDDSVRFKDSTRLTLRCRSCKAVFGFE 1308
Query: 1082 APTRLSTHGVVFVLDEC--INPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDP 1139
G++ + C C+ ++ +L + + KYYEGWL C+D
Sbjct: 1309 --------GILNSTENCSPFGIICRCGTTLSTLSIMTQLEHQIRQETCKYYEGWLVCDDQ 1360
Query: 1140 GCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
C + TR RC P GL + C +Y+ YTE +Y QL +F + D+ KA
Sbjct: 1361 ACGNRTRQMSVYGHRCLGPKGL-AQGCLGKMRYE----YTEKMMYNQLLYFSSLFDVDKA 1415
Query: 1191 LTKSDTPSIKFDS----ETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ + + S + + +K VE++L+ V + LF
Sbjct: 1416 KSNARGTEKELVSALAEHNRVKFGTLKSVVEKYLDKCGRQWVAMDSLFG 1464
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 236/572 (41%), Gaps = 115/572 (20%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A F +L+ L+ G K YE E++YEEV E+ Y + V R +DD++ DD G+GY
Sbjct: 9 AKFAELRALRESGKKRLDTYEVHQGEDLYEEVDEEGYKKVVRNRLDQDDFVIDDNGEGYA 68
Query: 116 EDGREIFDDDI---------EDVPQKKEK------------HDKRKKNKNIQNPNAKGDI 154
+DGRE +D D E++P + + K +K I N KG
Sbjct: 69 DDGREDWDRDNRRGYGTESEEELPTRSKNGKAAKRKREEEKVKKENMDKGISNYFTKGPA 128
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPT 214
PVK K +DD L LL +V+T + P T
Sbjct: 129 VAQQKPKPVKTKA-------DDDFLEGLLGQVDTNV--------------------PRST 161
Query: 215 AKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEV----EMNVAEQSKEEPV- 269
A+ P + K EK + SP + + +V N PV
Sbjct: 162 AQ--------PSRASKTQEKRRTRALSPSLNNTRHTSKRAKVADSRSANTMNAPSSPPVY 213
Query: 270 ---DDGLWEQMQIDDWDNSQQTQDVLPEQAKVE--LQIEAIESQSIEEKVDVTNVESVS- 323
DD L + DD + + Q P VE L I E + E+ ++V + ++
Sbjct: 214 VGDDDDLMAGIDDDDM-HMDEPQPSSPVAKAVERRLHISVKEEEEDEDMMEVAQADGITA 272
Query: 324 SAVELSTSPPPQVVEKK----------------EHKCAEW-EAIQTEPSTSEPQVHSRTA 366
S+V +S + PP ++K+ E + W + Q + Q T+
Sbjct: 273 SSVNISGTRPPPKLKKELYPTQTTSSPPRGPIDEVDASSWNDVTQRLNVMNSSQPTETTS 332
Query: 367 DDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDR 426
L E MF+ D E G + LFGKV K+ + SC V V N+ R
Sbjct: 333 FGKLDYNDAIEEDGSLHMFWTDYTE----MHGNLCLFGKVKNKKTGTFVSCFVKVDNVLR 388
Query: 427 KIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPD 482
K++ LPR + T + V + VY E D + T+ K+ K + +KYAF LP +P
Sbjct: 389 KLFFLPRQYRQRNGRDTTDEVEMKDVYEEVDSMMTKMKVGMHKIKPCTRKYAFELPEIPK 448
Query: 483 LSEYLEVR--YSAKCP-------------ALPSD-LSGDTFSHVFGTKSSFLENLLLERK 526
EYL++ YS+KC AL D +G TFSHVFG + E +L +
Sbjct: 449 EGEYLKLLYPYSSKCEIHHLATRLTTLDHALNVDQQTGSTFSHVFGANTPLFEQFVLWKN 508
Query: 527 IKGPSWLEFPEAEKFPS--RISWCKYEVQCNQ 556
I GP WL+ +A+ F + S+CK EVQ +
Sbjct: 509 IMGPCWLKIEDAD-FGALKNASYCKLEVQVTK 539
>gi|395331917|gb|EJF64297.1| DNA polymerase alpha catalytic subunit [Dichomitus squalens LYAD-421
SS1]
Length = 1462
Score = 461 bits (1185), Expect = e-126, Method: Compositional matrix adjust.
Identities = 291/701 (41%), Positives = 406/701 (57%), Gaps = 53/701 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN-------KKEGEETG 613
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK YGK +KE E G
Sbjct: 785 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKLYGKKAATAMKAEKEENEDG 844
Query: 614 E-ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-PVRML 671
E A K K+ Y GGLV EPK+G +DK+I++MDFNSLYPSIIQEYNI FTT+ P
Sbjct: 845 EGATKTTKSKRDKYKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTTVEPAE-- 902
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+D P QVD G+LP I LV RR VKALMK + L+Q+DI+Q AL
Sbjct: 903 EDEGGEEKIPEPPSSQVDQGVLPRLIATLVNRRRAVKALMKDKKATPAQLLQWDIKQMAL 962
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLGF SRF+A+PLAAL T KGREIL +T+ L E++ +V+YGDTDS+ ++
Sbjct: 963 KLTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAESMQLDVVYGDTDSVFVN 1022
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
NV D KI + K N YK LE+D+DG++K +LLL+KKKYAA+ + +
Sbjct: 1023 SNVTDLAEALKISAEFKKAVNDRYKLLEIDLDGIFKRLLLLQKKKYAAVKVEDSTR---- 1078
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
S E+KG+D+ RR++ L+ +V+ QIL + + + ++NIHE++ I +
Sbjct: 1079 TSTEVKGLDMKRREYCALSKTVSGYVLDQILSGE-----ATETVVENIHEYLVTIGQQVR 1133
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--ED 969
G + L I K+L K PE+Y D K+ PHVQVALR+ GD I YI C E
Sbjct: 1134 AGKIKLEEFIIHKRLGKNPEDYPDAKSQPHVQVALRM-KAKGGTAHAGDVIPYIFCLGEG 1192
Query: 970 GTSEAATQ--RAYNIEELKNNS-KLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
G + + Q RA + EE++ S K KID +YLSQQ+ P + RL EPIEGTD R+AECL
Sbjct: 1193 GETAKSAQADRARSPEEIRRESDKYKIDYEHYLSQQVLPPIERLCEPIEGTDRARLAECL 1252
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGE---AEEVKYQFCDKFEFTCMNPSCKQVNTVEAP 1083
GLD + YR+ +SEE G + ++ ++Q D F+ C SC+ V AP
Sbjct: 1253 GLDPNRYRTA---GTGESEERYFGTLDSLMSDAQRFQDADAFQVHCR--SCQNVVPF-AP 1306
Query: 1084 T--RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
R +H + P+C+ + + +L + ++I KYYE W C+D C
Sbjct: 1307 VSDREKSH---IRYSGLVCPQCRAA--VSIASVQTQLEVQIREHIAKYYESWTICDDATC 1361
Query: 1142 SDLTRRCPLGLKTRLC--TTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
+ TR +G+ R C C + + Y++ QLY QL ++ + DI KAL ++ T +
Sbjct: 1362 GNRTRM--MGVYGRRCLRPGC-RGTVAFEYSDAQLYNQLRYYFSLFDIKKAL-EAATGAT 1417
Query: 1200 KFDSETY----MGYC-KMKQHVERFLESSAYNIVDLKKLFS 1235
K D +T G C ++++ VER+L V + LFS
Sbjct: 1418 KDDLQTLGHLPQGICDQLREVVERYLNQCGRRWVQMSALFS 1458
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 101/190 (53%), Gaps = 15/190 (7%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE 441
R ++LD E G +Y GK K+ S CV V+N++R +++LPR ++ E
Sbjct: 350 LRFYWLDYLE----HDGRLYFIGKTQDKKTKVWVSICVTVENLERNLFVLPRERRMEEDE 405
Query: 442 PV----------SIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVR 490
++ +YS+FD++ + +I FK++ +++KYAF VP + ++L+V
Sbjct: 406 YTGEMYETDVVPTLGDIYSDFDKLRQKARIGKFKAKFVKRKYAFGEKDVPREERDWLKVV 465
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKY 550
Y P LP++ S FS +FGT +S E L+L+RKI GP WL+ E +SWCK
Sbjct: 466 YPFTEPQLPNNASSPNFSRIFGTNTSAFELLVLKRKIMGPCWLQIKHPEIDNKGVSWCKV 525
Query: 551 EVQCNQMEKI 560
E + + I
Sbjct: 526 EATVSDPKDI 535
Score = 47.8 bits (112), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 70 QGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVEDGREIFDDDIED 128
+G K +Y+ D ++Y+EV+E EY V R DD++ DDG GYV+ G DD E+
Sbjct: 22 EGGKREYKIEDDSSIYDEVTENEYKTIVKGRLARDDFVVDDGFSGYVDTGV----DDFEE 77
Query: 129 VPQKKEKHDKRKKNKN 144
+E ++R KNK+
Sbjct: 78 AGDVEEDEEERPKNKS 93
>gi|426196928|gb|EKV46856.1| hypothetical protein AGABI2DRAFT_119036 [Agaricus bisporus var.
bisporus H97]
Length = 1438
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 281/688 (40%), Positives = 396/688 (57%), Gaps = 31/688 (4%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK---KEGEETGEANK 617
++TN+ GN ++TL GGR+ERNE++LLH FH Y++PDK YGK K+ ++ +A K
Sbjct: 765 QLTNLAGNAWNKTLNGGRAERNEYILLHEFHRLKYIVPDKTYGKKTVPVKQDDDDPDAPK 824
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
KG K+ Y GGLV +PK+G +D +I++MDFNSLYPSIIQEYNI FTT+ ++ +
Sbjct: 825 TKG-KRDKYKGGLVFDPKRGLWDTYILVMDFNSLYPSIIQEYNIDFTTVEQFEVEGENGE 883
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
P + G+LP I LV+ RRQVK+LMK + S L+Q+DI+Q+ALKLTANS
Sbjct: 884 EKIPDPPPPKTAQGVLPRLIATLVQRRRQVKSLMKDKSASHAKLLQWDIKQQALKLTANS 943
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
MYGCLGF SRF+A+PLAAL T KGREIL +T+ L E+LN +V+YGDTDS+ ++ +
Sbjct: 944 MYGCLGFEYSRFYARPLAALTTYKGREILTHTRELAESLNLDVVYGDTDSVFVNSGQTEL 1003
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
KI K N YK LE+D+DGV++ +LLL+KKKYAAL + + K+ EIK
Sbjct: 1004 SEALKISASFKKTVNDRYKLLEIDLDGVFQRLLLLQKKKYAALKVEEGGRTKV----EIK 1059
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+D+ RR++ L+ ++V+ QIL + + ++NIHE++ I ++ NG +
Sbjct: 1060 GLDMKRREYCALSKNVSQYVLDQILSGE-----PTEIVVENIHEYLTTIGQNVRNGSTKV 1114
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED-GTSEAAT 976
I K+L K PE+Y D K PHVQVALR+ + + GD ISYI C D G S + T
Sbjct: 1115 EEFIIFKRLGKNPEDYPDAKNQPHVQVALRMKSRGGSA-RNGDVISYIFCLDEGESSSKT 1173
Query: 977 Q---RAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
RA + +E+ K+N +LKID ++YLSQQ+ P + RL + IEGTD R+AECLGLD
Sbjct: 1174 TQAGRAKHPDEVKKSNGELKIDYDFYLSQQVLPPIERLCDTIEGTDRSRLAECLGLDPMR 1233
Query: 1033 YRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV 1092
YR S E + + + +F D F CK V +P H +V
Sbjct: 1234 YRQ--GNSGGSDERAFIPLDSQLSDQERFKDASPFLIQCRKCK-VELSFSPINDREHSIV 1290
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL 1152
I P CK P L + +L + K I YYEGW C+DP C TR +
Sbjct: 1291 -QPSGFICPPCKAP--FSLASIEVQLEVQIRKTIGLYYEGWTVCDDPTCRSRTRMMSVYG 1347
Query: 1153 KTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL--TKSDTPS---IKFDSETYM 1207
+ L C + + YT+ ++Y QL ++ Y+ D KA+ K T S +
Sbjct: 1348 RRCLKQGC-RGTVAFEYTDKEIYNQLRYYSYLFDGEKAMKAAKGSTDSDAVYAIVGQRKT 1406
Query: 1208 GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
++ V++ L S + VDLK LFS
Sbjct: 1407 DLTRLSACVDKHLNMSGHRWVDLKGLFS 1434
Score = 129 bits (325), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 131/543 (24%), Positives = 247/543 (45%), Gaps = 58/543 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDD 104
R++R K +K A +++ ++ + +K + D +Y+EV+E +Y V R Q+DD
Sbjct: 3 RSRRAAKSKADKLAEYKRAREGGTRILKEE-----DTTIYDEVTEDQYKSIVKGRLQKDD 57
Query: 105 WIDDDGGDGYVEDG--------REIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQK 156
++ DDG GY+++G E DD I+ +KK+ D K P
Sbjct: 58 FVVDDGVAGYMDNGMDDWMDGNEESSDDQIQKKSKKKKSKDVSTSTKPRPKPRPALPAPS 117
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSE---VNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+ A P ++E D ++ LL E V T + PT K I ++ +P
Sbjct: 118 MSAYRPAVSAEQES------DFMSSLLGELDQVPTKVQPTKSRKRKPAPKYISDDDV-SP 170
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ ++ + + ++ + P++ + P +D+ S ++++ + + E+ D +
Sbjct: 171 GSSKFKSYQKRTPYMDLSSDGPVEDDLPPSEDDFTSPKKKIKIDDSAVTPAVEQLADLDV 230
Query: 274 -----WEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQ-SIEEKVDVTNVESVSSAVE 327
+E Q DD D ++ + I+ +S+ S++E+++ + ++
Sbjct: 231 HGSSDFESFQFDDIDFNE------------PMDIDGDDSKPSVKEEIEPV-IPKATTFNG 277
Query: 328 LSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFL 387
S P + K + ++++ E S + S +S +A E+ + R F++
Sbjct: 278 SSVKPVKTEEDTKPAWLSVYDSLNVESQDSLGPITSSNLSNSADIAALEEDGSL-RFFWI 336
Query: 388 DAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQ 447
D E G +Y GK+ K++ SCCV V+N+ R ++ LPR + + E I +
Sbjct: 337 DYLE----LDGKIYFIGKLKDKKSGVWISCCVAVENMQRNLFCLPREKRHEQDEDGDITE 392
Query: 448 ---------VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPA 497
VYS+F+ I + KI ++ + +++KYAF VP D +++L+V Y P
Sbjct: 393 TDIVPTMEDVYSDFELIRKELKIKKWRGKIVKRKYAFGEKDVPRDETQWLKVVYGFNEPP 452
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQM 557
+P + +FGT ++ E L+L+RKI GP WL+ ISWCK EV +
Sbjct: 453 IPPKAESPNIARIFGTSTNAFELLVLKRKIMGPCWLQVKNPVVDNKGISWCKLEVTVSDP 512
Query: 558 EKI 560
+ I
Sbjct: 513 KDI 515
>gi|71020891|ref|XP_760676.1| hypothetical protein UM04529.1 [Ustilago maydis 521]
gi|46100219|gb|EAK85452.1| hypothetical protein UM04529.1 [Ustilago maydis 521]
Length = 1667
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 281/724 (38%), Positives = 395/724 (54%), Gaps = 114/724 (15%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN ++TL GGR+ERNE++LLH FH + Y+ PDK KK+ ++ E K K
Sbjct: 902 QLTNLAGNSWNKTLNGGRAERNEYILLHDFHRQKYICPDKISAWEKKQIQQAAEL-KAKA 960
Query: 621 R-------------------KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
R KK + GGLV EPK+G +DK+I++MDFNSLYPSIIQE+NI
Sbjct: 961 RAKSNGGAADSSASTTAANSKKDKFKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEFNI 1020
Query: 662 CFTTI---PVRMLQDSDITTLCEY----------------------LPEHQVDTGILPSE 696
FTT+ P + ++D +I +P V+ G+LP
Sbjct: 1021 DFTTVERPPTQGIEDDEIGVAAATASSDTAGEAGADAAADVDKIPDVPSSDVEQGVLPRI 1080
Query: 697 IKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAA 756
I +LV RRQVK+LMK + + L+Q++I+Q ALKLTANSMYGCLGF NSRF+A+PLAA
Sbjct: 1081 IAQLVARRRQVKSLMKDKSATPSQLLQWNIKQLALKLTANSMYGCLGFENSRFYARPLAA 1140
Query: 757 LVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK 816
L T KGREIL TK L E++ +VIYGDTDS+MI+ N +Y +IG + K N+ Y+
Sbjct: 1141 LTTFKGREILTATKDLAESMLLDVIYGDTDSVMINTNATEYREALRIGQEFKKSVNERYR 1200
Query: 817 QLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKF 876
LE+DIDGV++ MLLL+KKKYAA+ + + GK S EIKG+D+ RR++S L+ +
Sbjct: 1201 LLEIDIDGVFERMLLLQKKKYAAVLVDE--EGKR--STEIKGLDMKRREYSALSKNVSNY 1256
Query: 877 VISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDR 936
V+ QIL Q + + +++IHE++ I T + G V L I K+L K PE+Y D
Sbjct: 1257 VLEQILSGQ-----ATELVVEHIHEYLSDISTKIKMGEVGLDDFIIYKRLGKNPEDYPDV 1311
Query: 937 KALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDGTSE---AATQRAYNIEELKN-NSK 990
K+ PHVQVALR+ T + GD I YI C EDGTS A +RA++ +EL+ +S+
Sbjct: 1312 KSQPHVQVALRM-KTRGGNARMGDVIPYIFCLGEDGTSSTKTAQAERAHHPDELRRKDSE 1370
Query: 991 LKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY-----RSQIKESIQQSE 1045
LKID +YL+ QI P V RL E IEGTD R+AECLGLD S Y E
Sbjct: 1371 LKIDYEHYLALQILPPVERLCESIEGTDRSRLAECLGLDPSKYSHVSHSGAGSGGAVGRE 1430
Query: 1046 ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDE-------- 1097
L +EV++ C+ + TC PSC++ +T P + + VL +
Sbjct: 1431 FATLDSQIPDEVRFAQCEPLKLTC--PSCRESSTFLGPAHRAASSAIKVLGDSTNTQRSE 1488
Query: 1098 ----------CINPECK--VPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
C N C+ +P L + +L + ++ +YY GW +C DP C T
Sbjct: 1489 PNAISTKGIRCTNAACQRMLP----LATMAIQLELAIRSFVERYYAGWTECSDPNCGSRT 1544
Query: 1146 RRCPLGLKTRLCTTCH--------------------KYKLHRVYTELQLYQQLSFFHYIC 1185
R + K C H + ++ VY + QLY QL + +
Sbjct: 1545 RLASVYAKR--CVAVHDAKSAALLDATSTTGSHLACRGRVEPVYRDKQLYDQLIYLESLF 1602
Query: 1186 DITK 1189
D ++
Sbjct: 1603 DSSR 1606
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 9/190 (4%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
E+ K ++LD E + G VYL GKV K++ + SCC+ V I+R I+LLPRS+
Sbjct: 467 EDDKSLFFYWLDYLEG---ENGIVYLVGKVKDKDSGRYVSCCLTVNGIERCIFLLPRSKQ 523
Query: 437 LK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYS 492
L+ T PV ++Y EF++++ ++ I F S+ + +KYAF GVP S Y+++RY
Sbjct: 524 LENGHETDRPVGEDEIYDEFEELSAKHGIKGFLSKWVTRKYAFEQAGVPAESNYMKIRYG 583
Query: 493 AKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE--KFPSRISWCKY 550
P LP D G TFS FGT +S E L+++R+I GPSWL+ A + + ISWCK
Sbjct: 584 FDEPQLPFDFKGKTFSKAFGTNTSPFELLVVKRRIFGPSWLKISNASLAEGSTPISWCKM 643
Query: 551 EVQCNQMEKI 560
EV + + I
Sbjct: 644 EVSIDDPKDI 653
>gi|409081694|gb|EKM82053.1| hypothetical protein AGABI1DRAFT_126401 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1438
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 279/688 (40%), Positives = 396/688 (57%), Gaps = 31/688 (4%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK---KEGEETGEANK 617
++TN+ GN ++TL GGR+ERNE++LLH FH Y++PDK YGK K+ ++ +A K
Sbjct: 765 QLTNLAGNAWNKTLNGGRAERNEYILLHEFHRLKYIVPDKTYGKKTAPVKQDDDDPDAPK 824
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
KG K+ Y GGLV +PK+G +D +I++MDFNSLYPSIIQEYNI FTT+ ++ +
Sbjct: 825 TKG-KRDKYKGGLVFDPKRGLWDTYILVMDFNSLYPSIIQEYNIDFTTVEQFEVEGENGE 883
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
P + G+LP I LV+ RRQVK+LMK + S L+Q+DI+Q+ALKLTANS
Sbjct: 884 EKIPDPPPPKTAQGVLPRLIATLVQRRRQVKSLMKDKSASHAKLLQWDIKQQALKLTANS 943
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
MYGCLGF SRF+A+PLAAL T KGREIL +T+ L E+LN +V+YGDTDS+ ++ +
Sbjct: 944 MYGCLGFEYSRFYARPLAALTTYKGREILTHTRELAESLNLDVVYGDTDSVFVNSGQTEL 1003
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
KI K N YK LE+D+DGV++ +LLL+KKKYAAL + + K+ EIK
Sbjct: 1004 SEALKISASFKKTVNDRYKLLEIDLDGVFQRLLLLQKKKYAALKVEEGGRTKV----EIK 1059
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+D+ RR++ L+ ++V+ QIL + + ++NIHE++ I ++ NG +
Sbjct: 1060 GLDMKRREYCALSKNVSQYVLDQILSGE-----PTEIVVENIHEYLTTIGQNVRNGSTKV 1114
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED-GTSEAAT 976
I K+L K PE+Y D K PHVQVALR+ + + GD ISYI C D G S + T
Sbjct: 1115 EEFIIFKRLGKNPEDYPDAKNQPHVQVALRMKSRGGSA-RNGDVISYIFCLDEGESSSKT 1173
Query: 977 Q---RAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
RA + +E+ K+N +LKID ++YLSQQ+ P + RL + IEGTD R+AECLGLD
Sbjct: 1174 TQAGRAKHPDEVKKSNGELKIDYDFYLSQQVLPPIERLCDTIEGTDRSRLAECLGLDPMR 1233
Query: 1033 YRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV 1092
YR S E + + + +F D F CK V +P H +V
Sbjct: 1234 YRQ--GNSGGSDERAFIPLDSQLSDQERFKDASPFLIKCRKCK-VELSFSPINDREHSIV 1290
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL 1152
I P CK P L + +L + K I YYEGW C+DP C TR +
Sbjct: 1291 -QPSGFICPPCKAP--FSLASIEVQLEVQIRKTIGLYYEGWTVCDDPTCRSRTRMMSVYG 1347
Query: 1153 KTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMG---- 1208
+ L C + + YT+ ++Y QL ++ Y+ D KA + + +G
Sbjct: 1348 RRCLKQGC-RGTVAFEYTDKEIYNQLRYYSYLFDGEKARKAAKGSTDSDAVHAIVGQRKT 1406
Query: 1209 -YCKMKQHVERFLESSAYNIVDLKKLFS 1235
++ V++ L+ S + VDLK LFS
Sbjct: 1407 DLARLSACVDKHLKMSGHRWVDLKGLFS 1434
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 247/543 (45%), Gaps = 58/543 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDD 104
R++R K +K A +++ ++ + +K + D +Y+EV+E +Y V R Q+DD
Sbjct: 3 RSRRAAKSKADKLAEYKRAREGGTRILKEE-----DTTIYDEVTEDQYKSIVKGRLQKDD 57
Query: 105 WIDDDGGDGYVEDG--------REIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQK 156
++ DDG GY+++G E DD ++ +KK+ D K P
Sbjct: 58 FVVDDGVAGYMDNGMDDWMDGNEESSDDQVQKKSKKKKSKDVSTSTKPRPKPRPALPAPS 117
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSE---VNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+ A P ++E D ++ LL E V T + PT K I ++ +P
Sbjct: 118 MSAYRPAVSAEQES------DFMSSLLGELDQVPTKVQPTKSRKRKPAPQYISDDDV-SP 170
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ ++ + + ++ + P++ + P +D+ S ++++ + + E+ D +
Sbjct: 171 GSSKFKSYQKRTPYMDLSSDGPVEDDLPPSEDDFTSPKKKIKIDDSAVTPAVEQLADLDV 230
Query: 274 -----WEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQ-SIEEKVDVTNVESVSSAVE 327
+E Q DD D ++ + I+ +S+ S++E+++ + ++
Sbjct: 231 HGSSDFESFQFDDIDFNE------------PMDIDGDDSKPSVKEEIEPV-IPKATTFNG 277
Query: 328 LSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFL 387
S P + K + ++++ E S + S +S +A E+ + R F++
Sbjct: 278 NSVKPVKTEEDTKPAWLSVYDSLNVESQDSLGPITSSNLSNSADIAALEEDGSL-RFFWI 336
Query: 388 DAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQ 447
D E G +Y GK+ K++ SCCV V+N+ R ++ LPR + + E I +
Sbjct: 337 DYLE----LDGKIYFIGKLKDKKSGVWISCCVAVENMQRNLFCLPREKRHEQDEDGDITE 392
Query: 448 ---------VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPA 497
VYS+F+ I + KI ++ + +++KYAF VP D +++L+V Y P
Sbjct: 393 TDIVPTMEDVYSDFELIRKELKIKKWRGKIVKRKYAFGEKDVPRDETQWLKVVYGFNEPP 452
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQM 557
+P + +FGT ++ E L+L+RKI GP WL+ ISWCK EV +
Sbjct: 453 IPPKAESPNIARIFGTSTNAFELLVLKRKIMGPCWLQIKNPVVDNKGISWCKLEVTVSDP 512
Query: 558 EKI 560
+ I
Sbjct: 513 KDI 515
>gi|154305854|ref|XP_001553328.1| hypothetical protein BC1G_08158 [Botryotinia fuckeliana B05.10]
Length = 1456
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 284/709 (40%), Positives = 411/709 (57%), Gaps = 42/709 (5%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K
Sbjct: 765 IAALALKVQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKAVFK 823
Query: 605 NKKE-GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
K++ EE + G +KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICF
Sbjct: 824 GKQQVEEENADEENGDVKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICF 883
Query: 664 TTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
TT+ R+ +D + E +P+ Q D GILP I LV RRQVK+LMK + +S+ L
Sbjct: 884 TTVD-RLNLSNDEDRVPE-VPKDQ-DQGILPKLIATLVSRRRQVKSLMKDKHATSEQLAT 940
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYG 783
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYG
Sbjct: 941 WDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKDLAESKSLQVIYG 1000
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
DTDS+MI+ NV++ +GN K N LY+ LE+DID V++ +LL KKKYAA+++
Sbjct: 1001 DTDSVMINANVDNIQDALAVGNDFKKSVNDLYRLLEIDIDNVFRRILLQAKKKYAAINLV 1060
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
++ +GK I E+KG+D+ RR++ L+ E V SQ+L+E D S + + IH+++
Sbjct: 1061 QV-DGKFIDKMEVKGLDMKRREYCNLSKE----VSSQLLNEILSGDDS-EAVITRIHDYL 1114
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTIS 963
++I T + G VP+ I +L KAP++Y + +P VQVALR K++++ D I+
Sbjct: 1115 REISTKMREGNVPVQKYTIYTKLGKAPKDYPNADNMPQVQVALR-ELAKGKQVRKDDVIA 1173
Query: 964 YIICEDG-TSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
YI+ +G TSE A +R++ ++ +K +S LK DV +YL +QI P V RL I GTD VR
Sbjct: 1174 YIVTGEGKTSENAAKRSFTPQDVMKRDSGLKPDVEWYLYKQIFPPVERLCANISGTDTVR 1233
Query: 1022 IAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVE 1081
+A+CLGLD Y S +E I + + +F D T SCK + E
Sbjct: 1234 LADCLGLDARKYSINNNNSAGNNEAEIHPLESQIDDSVRFKDSTRLTLRCRSCKAMFGFE 1293
Query: 1082 APTRLSTHGVVFVLDEC--INPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDP 1139
G++ + C C+ ++ +L + + KYYEGWL C+D
Sbjct: 1294 --------GILNSTENCSPFGIICRCGTTLSTLSIMTQLEHQIRQETCKYYEGWLVCDDQ 1345
Query: 1140 GCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
C + TR RC P GL + C +Y+ YTE +Y QL +F + D+ KA
Sbjct: 1346 ACGNRTRQMSVYGHRCLGPKGL-AQGCLGKMRYE----YTEKMMYNQLLYFSSLFDVDKA 1400
Query: 1191 LTKSDTPSIKFDS----ETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ + + S + + +K VE++L+ V + LF
Sbjct: 1401 KSNARGTEKELVSALAEHNRVKFGTLKSVVEKYLDKCGRQWVAMDSLFG 1449
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 163/567 (28%), Positives = 238/567 (41%), Gaps = 120/567 (21%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A F +L+ L+ G K YE E++YEEV E+ Y + V R +DD++ DD G+GY
Sbjct: 9 AKFAELRALRESGKKRLDTYEVHQGEDLYEEVDEEGYKKVVRNRLDQDDFVIDDNGEGYA 68
Query: 116 EDGREIFDDDI---------EDVPQKKEK------------HDKRKKNKNIQNPNAKGDI 154
+DGRE +D D E++P + + K +K I N KG
Sbjct: 69 DDGREDWDRDNRRGYGTESEEELPTRNKNGKAAKRKREEEKVKKENMDKGISNYFTKGPA 128
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPT 214
PVK K +DD L LL +V+T + P T
Sbjct: 129 VAQQKPKPVKTKA-------DDDFLEGLLGQVDTNV--------------------PRST 161
Query: 215 AKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEV----EMNVAEQSKEEPV- 269
A+ P + K EK + SP + + +V N PV
Sbjct: 162 AQ--------PSRASKTQEKRRTRALSPSLNNTRHTSKRTKVADSRSANTMNAPSSPPVY 213
Query: 270 ---DDGLWEQMQIDDWDNSQQTQDVLPEQAKVE--LQIEAIESQSIEEKVDVTNVESVS- 323
DD L + DD + + Q P VE L I E + E+ ++V + ++
Sbjct: 214 VGDDDDLMAGIDDDDM-HMDEPQPSSPVAKAVERRLHISVKEEEEDEDMMEVAQADGITA 272
Query: 324 SAVELS-TSPPPQVVEKKEHKCAEWEAIQTEPSTSEP------QVHSRTADD-------- 368
S+V +S T PPP++ KKE + P+TS P +V + + +D
Sbjct: 273 SSVNISGTRPPPKL--KKE--------LYPTPTTSSPPRGPIDEVDASSWNDVTQRLNVM 322
Query: 369 --SLPLATDH----------ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSS 416
S P T E MF+ D E G + LFGKV K+ + S
Sbjct: 323 NSSQPTETTSFGKLDYNDAIEEDGSLHMFWTDYTE----MHGNLCLFGKVKNKKTGTFVS 378
Query: 417 CCVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK 472
C V V N+ RK++ LPR + T + V + VY E D + T+ K+ K + +K
Sbjct: 379 CFVKVDNVLRKLFFLPRQYRQRNGRDTTDEVEMKDVYEEVDSMMTKMKVGMHKIKPCTRK 438
Query: 473 YAFNLPGVPDLSEYLEVRYSAKCPALPSD-LSGDTFSHVFGTKSSFLENLLLERKIKGPS 531
YAF LP +P EYL++ Y AL D +G TFSHVFG + E +L + I GP
Sbjct: 439 YAFELPEIPKEGEYLKLLYPYSNHALNVDQQTGSTFSHVFGANTPLFEQFVLWKNIMGPC 498
Query: 532 WLEFPEAEKFPS--RISWCKYEVQCNQ 556
WL+ +A+ F + S CK EVQ +
Sbjct: 499 WLKIEDAD-FGALKNASHCKLEVQVTK 524
>gi|334188684|ref|NP_201511.2| DNA polymerase alpha catalytic subunit [Arabidopsis thaliana]
gi|363548407|sp|Q9FHA3.2|DPOLA_ARATH RecName: Full=DNA polymerase alpha catalytic subunit
gi|332010917|gb|AED98300.1| DNA polymerase alpha catalytic subunit [Arabidopsis thaliana]
Length = 1524
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 291/696 (41%), Positives = 404/696 (58%), Gaps = 81/696 (11%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK------------ 607
+++TN+ GN+ +TL G R++R E+ LLH FH K ++LPDK + K+
Sbjct: 808 LQLTNISGNLWGKTLQGARAQRIEYYLLHTFHSKKFILPDKISQRMKEIKSSKRRMDYAP 867
Query: 608 --------EGEETGEANKGKG---RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSII 656
+ + T E + KG +K AY+GGLVLEPK+G YDK+++L+DFNSLYPSII
Sbjct: 868 EDRNVDELDADLTLENDPSKGSKTKKGPAYAGGLVLEPKRGLYDKYVLLLDFNSLYPSII 927
Query: 657 QEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
QEYNICFTTIP +D LP Q GILP ++ LV R+ VK MK+
Sbjct: 928 QEYNICFTTIPRS--EDG-----VPRLPSSQT-PGILPKLMEHLVSIRKSVKLKMKKE-- 977
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN- 775
+ + DIRQ+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GR+IL T LV+N
Sbjct: 978 TGLKYWELDIRQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGRDILQRTVDLVQNH 1037
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
LN EVIYGDTDS+MI ++D + V I +++ E NK Y+ L++D DG+YK MLLL+KK
Sbjct: 1038 LNLEVIYGDTDSIMIHSGLDDIEEVKAIKSKVIQEVNKKYRCLKIDCDGIYKRMLLLRKK 1097
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYAA+ + + +GK E KGVD+VRRDWS L+ E G +S+IL S +D
Sbjct: 1098 KYAAVKL-QFKDGKPCEDIERKGVDMVRRDWSLLSKEIGDLCLSKIL-----YGGSCEDV 1151
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
++ IH + KI+ ++ NG V L ITK LTK P Y D K+ PHVQVALR+ K+
Sbjct: 1152 VEAIHNELMKIKEEMRNGQVALEKYVITKTLTKPPAAYPDSKSQPHVQVALRMRQRGYKE 1211
Query: 956 -LKQGDTISYIIC-EDGT-----SEAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVV 1007
DT+ YIIC E G S +RA + +E+K+ S+ +D++YYL+QQIHPVV
Sbjct: 1212 GFNAKDTVPYIICYEQGNASSASSAGIAERARHPDEVKSEGSRWLVDIDYYLAQQIHPVV 1271
Query: 1008 TRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEF 1067
+RL I+GT R+AECLGLD S YRS+ ++ L ++E +Y+ C+
Sbjct: 1272 SRLCAEIQGTSPERLAECLGLDPSKYRSKSNDATSSDPSTSLLFATSDEERYKSCEPLAL 1331
Query: 1068 TCMNPSCKQ-------VNTVEA--------PTRLSTHGVVFVLDECINPECKVPPYTYL- 1111
TC PSC +++V A P + ++ C P+C+ T +
Sbjct: 1332 TC--PSCSTAFNCPSIISSVCASISKKPATPETEESDSTFWLKLHC--PKCQQEDSTGII 1387
Query: 1112 -PHLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCP----LGLKTRLCTTCHKY-- 1163
P +I N++ + ++ ++ YY+G + CED C TR P LG + R T C Y
Sbjct: 1388 SPAMIANQVKRQIDGFVSMYYKGIMVCEDESCKHTTRS-PNFRLLGERER-GTVCPNYPN 1445
Query: 1164 ---KLHRVYTELQLYQQLSFFHYICDITKALTKSDT 1196
L R YTE LY+QLS+F +I D +L K D
Sbjct: 1446 CNGTLLRKYTEADLYKQLSYFCHILDTQCSLEKMDV 1481
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 135/587 (22%), Positives = 241/587 (41%), Gaps = 102/587 (17%)
Query: 38 GTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHK----YEFTADENVYEEVSEKEY 93
G E GR + + + +++ ++LK ++ G++ Y+ + +++ V ++EY
Sbjct: 3 GDNSTETGRRRSRGAEASSRKDTLERLKAIRQGGIRSASGGGYDIRLQKPIFDTVDDEEY 62
Query: 94 TERVLKRQED--DWI--DDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKK-------- 141
V +R+E+ ++ D +GGD D E D P+ ++ D +
Sbjct: 63 DALVSRRREEARGFVVEDGEGGDLGYLDEGEEEDWSKPSGPESTDESDDGGRFSGRLKKK 122
Query: 142 ---NKNIQNPNAK---------------GDIQKLLANMPVKK-KKKEEVQLNNDDVLADL 182
+ Q P K G + + + KK K+ ++ Q +
Sbjct: 123 KKGKEQTQQPQVKKVNPALKAAATITGEGRLSSMFTSSSFKKVKETDKAQYEG------I 176
Query: 183 LSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSP 242
L E+ + P K +P P + L + + + +++ EP+P
Sbjct: 177 LDEIIAQVTPDESDRKKHTRRKLPGTVPVTIFKNKKLFSVASSMGMKES-------EPTP 229
Query: 243 LKDEIKSNDSV-MEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQ 301
E DSV M+ E+ E KE V ++ D + + + K EL
Sbjct: 230 STYE---GDSVSMDNELMKEEDMKESEVIPSETMELLGSDIVKEDGSNKIRKTEVKSELG 286
Query: 302 IEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQV 361
++ E ++ +D+ +S SA A W+ + T +
Sbjct: 287 VK--EVFTLNATIDMKEKDSALSAT------------------AGWKEAMGKVGTENGAL 326
Query: 362 HSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQP-GTVYLFGKVFVKENNSHSSCCVI 420
+++ D + R F LDA+E+ + GT+YLFGKV K +++ SCCV+
Sbjct: 327 LGSSSEGKTEFDLDADGS--LRFFILDAYEEAFGASMGTIYLFGKV--KMGDTYKSCCVV 382
Query: 421 VQNIDRKIYLLPRSEHLKTKEPVSIAQ----------------------VYSEFDQIATQ 458
V+NI R +Y +P + E + + Q + +E Q Q
Sbjct: 383 VKNIQRCVYAIPNDSIFPSHELIMLEQEVKDSRLSPESFRGKLHEMASKLKNEIAQELLQ 442
Query: 459 YKILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSF 517
+ +F +++ YAF P VP +Y L++ YS K LP DL G++FS + G+ +S
Sbjct: 443 LNVSNFSMAPVKRNYAFERPDVPAGEQYVLKINYSFKDRPLPEDLKGESFSALLGSHTSA 502
Query: 518 LENLLLERKIKGPSWLEFPE-AEKFPSR-ISWCKYEVQCNQMEKIRI 562
LE+ +L+RKI GP WL+ + PS +SWCK+EV + I I
Sbjct: 503 LEHFILKRKIMGPCWLKISSFSTCSPSEGVSWCKFEVTVQSPKDITI 549
>gi|397638381|gb|EJK73045.1| hypothetical protein THAOC_05357 [Thalassiosira oceanica]
Length = 1023
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 280/706 (39%), Positives = 408/706 (57%), Gaps = 66/706 (9%)
Query: 531 SWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAF 590
+WL P P R + ++ + + + ++TN+ GN+ + T+ G R++R+E+LLLH F
Sbjct: 278 AWLGVPS----PGRSTHTTLQL-LSSIARQQLTNIAGNLWNATIKGNRAQRSEYLLLHEF 332
Query: 591 HEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNS 650
H Y+ P+K K ++E E G+ K Y+GGLVL+PKKG YD FI+L+DFNS
Sbjct: 333 HRLKYIKPEKITAKQRREDAEEAGGKAAGGKSKKGYAGGLVLDPKKGLYDSFILLLDFNS 392
Query: 651 LYPSIIQEYNICFTTIPVRMLQDSDIT-------TLCEYLPEHQVDTGILPSEIKKLVES 703
LYPS+IQEYN+CFTT+ +D DI LP+ +D G+LP IK LVE
Sbjct: 393 LYPSLIQEYNLCFTTM--DWAKDKDIADEAGAQENQLPSLPDESLDRGVLPRVIKSLVER 450
Query: 704 RRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGR 763
RR VK MK +D + +IRQ ALKLTANSMYGCLGF NSRF+A+P+AALVTA GR
Sbjct: 451 RRNVKKFMKSEK-DADKKEELNIRQLALKLTANSMYGCLGFQNSRFYARPIAALVTAMGR 509
Query: 764 EILLNTKSLVE-NLNYEVIYGDTDSLMISCNVND---YDSVFKIGNQIKSECNKLYKQLE 819
+ L T + + + +VIYGDTDS+MI+ + D Y +V ++GN++K E N+LYK LE
Sbjct: 510 QTLQRTVDITQTTIGLDVIYGDTDSIMINTRITDLEEYSTVLELGNKVKREVNRLYKTLE 569
Query: 820 LDIDGVYKYMLLLKKKKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVI 878
L+IDG+++ MLLLKKKKYAAL+I+ GK +E+KG+D+VRRDW + ++GK+VI
Sbjct: 570 LEIDGIFRSMLLLKKKKYAALTITTDGPGGKFKFDKELKGLDLVRRDWCLQSKDSGKYVI 629
Query: 879 SQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTD 935
QIL S +DR + NIH+H++ + + +G + L ITK L K P EY D
Sbjct: 630 DQIL--------SGEDRELIVSNIHDHLENVAKKMRSGELSLDKYVITKGLNKHPNEYPD 681
Query: 936 RKALPHVQVALRLNNTNSKKLKQGDTISYII-----CEDGTSEAA------TQRAYNIEE 984
K+LPHV VA + N K + GD I Y+I E+G + AA ++RA + +E
Sbjct: 682 GKSLPHVHVAKTMLK-NHKAVSIGDHIPYVITESKDAEEGGNSAANSKKNSSERARHPDE 740
Query: 985 LKNNS-KLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQ 1043
++ +S +LK D+++YL+ QI P ++RL EPIEGT +AE LGLD+S Y++ S+
Sbjct: 741 IERSSGELKPDIDWYLNNQILPTISRLCEPIEGTSPGILAEKLGLDSSKYKAI---SVNI 797
Query: 1044 SEENILGVGEA----EEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL---STHGVVFVLD 1096
E++I+ A +E +++ +KF C SC + RL S G+ F
Sbjct: 798 DEDDIVDYTPASCLPDEERFKDVEKFNVLCS--SCGTESEFPGVFRLVKDSDSGMTFCQS 855
Query: 1097 --ECINPECKVPP-------YTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
C NP C P ++ ++N ++ KYY+G +C+DP C TR+
Sbjct: 856 GFRCPNPSCHSPNNWGEADLFSCTAKILNGMNLLKQNVQRKYYDGLTRCDDPMCDLETRQ 915
Query: 1148 CPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK 1193
+ L C+ ++ VYTE L QL + + D+ A K
Sbjct: 916 VSVYEGCCLKAGCNG-RMRTVYTESSLQTQLKYLDSLFDMAHAKKK 960
>gi|116191701|ref|XP_001221663.1| hypothetical protein CHGG_05568 [Chaetomium globosum CBS 148.51]
gi|88181481|gb|EAQ88949.1| hypothetical protein CHGG_05568 [Chaetomium globosum CBS 148.51]
Length = 1474
Score = 457 bits (1177), Expect = e-125, Method: Compositional matrix adjust.
Identities = 273/680 (40%), Positives = 398/680 (58%), Gaps = 50/680 (7%)
Query: 532 WLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFH 591
+L EA+ + IS + Q + K+ +TN+ GN +RTL G R+ERNE++LLHAFH
Sbjct: 756 YLSHAEADTY--FISALAFRTQILPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHAFH 812
Query: 592 EKSYVLPDKQYGKNKKEGEETGEANKGK-GRKKAAYSGGLVLEPKKGFYDKFIILMDFNS 650
+K ++ PDKQ K + +E + + G +KK Y GGLV EP++G YDKF+++MDFNS
Sbjct: 813 KKRFICPDKQPFKGRGRADEEDQEDGGADSKKKDKYKGGLVFEPERGLYDKFVLVMDFNS 872
Query: 651 LYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKAL 710
LYPSIIQEYNICFTT+ + D + +PE + + GILP I +LV+ RRQVK L
Sbjct: 873 LYPSIIQEYNICFTTVDRSFVSDDEDGV--PPVPEDK-ELGILPKLISELVDRRRQVKGL 929
Query: 711 MKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTK 770
MK ++ + L YDI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK
Sbjct: 930 MKAKGITPEQLATYDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTFKGREILRSTK 989
Query: 771 SLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYML 830
L E ++ +VIYGDTDS+MI+ NV++ FK+G K+E NK YK+LE+DID V++ +L
Sbjct: 990 DLAEGMSLQVIYGDTDSVMINANVDNVADAFKVGRAFKAEVNKRYKRLEIDIDNVFRRIL 1049
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L KKKYAA+++ ++ +GK I E+KG+D+ RR++ L+ + K ++ +IL S D
Sbjct: 1050 LQAKKKYAAMNLVEV-DGKFIEEMEVKGLDMKRREYCPLSRDISKRILDEIL---SGDDI 1105
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
L +Q IHE+++ I + + + + I QL K+P+EY + ++P VQVALR
Sbjct: 1106 ELS--IQRIHEYLRDISSKMREQAIATSKYIILTQLGKSPKEYPNADSMPQVQVALR-EL 1162
Query: 951 TNSKKLKQGDTISYIICEDG--TSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVV 1007
K +++GD +SYII D TSE A +RAY ++ LK +S L DV +YL +QI P V
Sbjct: 1163 ARGKTMRKGDVVSYIITGDSKTTSEPAPKRAYTPQDVLKADSGLTPDVEWYLGKQIFPPV 1222
Query: 1008 TRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENI----LGVGEAEEVKYQFCD 1063
RL I GT ++A+ LGLD Y + + S ++ L + ++Q C
Sbjct: 1223 ERLCANIVGTSTAQLADNLGLDVRRYATNNTSNSSSSNRDVEIHPLESQIPDATRFQDCA 1282
Query: 1064 KFEFTCMNPSCKQVNTVE----APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLS 1119
+ C +CK E + R++ GV C P+C T ++ ++
Sbjct: 1283 RLSLRCR--ACKTTAPFEGLLGSSDRITPSGV-----SC--PQCGTVLSTL--SIVAQVE 1331
Query: 1120 QDMNKYIVKYYEGWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYT 1170
+YYEGWL C+D C + TR RC P GL R C +Y++
Sbjct: 1332 AAARAQTARYYEGWLVCDDASCGNRTRQISVAGSRCLGPRGL-ARDCQGRMRYEMG---- 1386
Query: 1171 ELQLYQQLSFFHYICDITKA 1190
E +Y QL +F + D+ +A
Sbjct: 1387 EKAVYNQLLYFASLWDVDRA 1406
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 156/598 (26%), Positives = 259/598 (43%), Gaps = 90/598 (15%)
Query: 52 IDKTNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDD 108
+ K +K F +L+ L+ G K+ YE ++YEEV E +Y + V R EDD++ D
Sbjct: 1 MSKASKRGRFAELRALRQSGKKNFDTYEVEDAADLYEEVDENQYKKIVRDRLNEDDFVVD 60
Query: 109 DGGDGYVEDGREIFD-----------------DDIEDVPQKKEKHDKRKKN-KNIQNPNA 150
D G+GY +DGRE +D D + Q+ E+ KR N +NI
Sbjct: 61 DNGEGYADDGREEWDRVQTYDSESDGALPVRGKDRKSKKQRDEEQSKRDANDRNISEYFT 120
Query: 151 KGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTI-APTLKLNTKT--------N 201
KG + A K K EE +D L DLL EV+ + P ++ K N
Sbjct: 121 KGASK---AQPKPKVIKTEE----DDKFLEDLLGEVDANVPVPAPRVTKKRDRSAERRRN 173
Query: 202 EIVIPKEEPPAPTAKEYL---ANFSKPIKVEKKIEK-----PIKKEPSPLKDEIKSNDSV 253
+ P E P K+ + S P+ + + + P +++ P+ ++ +D
Sbjct: 174 RALSPARESRQPATKKTKMLDGSASSPVATDVAMAEDDFVPPAEEDELPVPLDVDMSDPA 233
Query: 254 MEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEK 313
+ + +P D +++D+ D + E + A+ + S
Sbjct: 234 PSSPAAKVAERRTQPKPD-------TNEYDDFDDDDDDMMEVGRTG----AVAAAS---- 278
Query: 314 VDVTNVESVSSAVELSTSP---PPQVVEKKEHKCAEWEAIQTE---PSTSEPQVHSRTAD 367
V+++ + ++ +P P + + W I + S+S+P+ S
Sbjct: 279 VNLSAARQIKKIIKPDPTPVTSSPAKGPETAVDASSWNGINDKLNVVSSSQPEARSMGKM 338
Query: 368 DSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRK 427
D E MF+ D + +++ G++ LFGKV K+ H SC V V NI RK
Sbjct: 339 D---YKDAIEPDGSLNMFWTD-YTEVH---GSLCLFGKVLNKKTGHHVSCFVKVDNILRK 391
Query: 428 IYLLPRSEHL----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDL 483
+Y LPR + KT E V + VYSE D I T+ + K + +KYAF LP +P
Sbjct: 392 LYFLPRKHRVQRGVKTTEQVEMMDVYSEVDTIMTKMNVNMHKIKTCTRKYAFELPDIPKK 451
Query: 484 SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS 543
++Y+++ Y PA+ G+TFSHVFGT +S E +L + + GP WL +A+ F +
Sbjct: 452 AQYMKLLYPYTKPAIELGTKGETFSHVFGTNTSLFEQFVLWKNVMGPCWLRIKDAD-FGA 510
Query: 544 --RISWCKYEVQCNQMEKIRITN----------VCGNVLSRTLMGGRSERNEFLLLHA 589
S C+ EV + E + + ++ RT+ + + E L + A
Sbjct: 511 LKNASHCRLEVLVDNPEMVTVVEENEGMDMPPLTMMSIALRTMFNAKDNKQEILAISA 568
>gi|393910144|gb|EFO26754.2| hypothetical protein LOAG_01730 [Loa loa]
Length = 1444
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 281/704 (39%), Positives = 402/704 (57%), Gaps = 68/704 (9%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG------ 613
I+IT + G VLSRT++GGR+ERNE+LLLHAF++ YV P+K Y + K+ +++G
Sbjct: 776 IQITKIVGGVLSRTMLGGRAERNEYLLLHAFNKAGYVPPNK-YQPDSKKRKQSGLKDTKS 834
Query: 614 ------EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ K + +K Y GGLVL+PK G YD F++L+DFNSLYPSIIQEYNICFTT+
Sbjct: 835 VDDDLEDYKKVQHNRKGQYVGGLVLDPKIGLYDTFVLLLDFNSLYPSIIQEYNICFTTVD 894
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
+ D + E LP V+ GILP EI+ LVE RR VK +MK L+ QYDIR
Sbjct: 895 ---MSKKDKNEMPE-LPS-DVNEGILPREIRSLVERRRDVKRMMKSEKLTQQQRQQYDIR 949
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q LKLTANSMYGCLGF SRF+A+PLAAL+TA+GREIL++TK L+E Y VIYGDTDS
Sbjct: 950 QMGLKLTANSMYGCLGFQQSRFYAKPLAALITAQGREILMHTKDLIEKNGYSVIYGDTDS 1009
Query: 788 LMISCNV---NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
+MI+ ++ V K+GN++ +++ +K+KYA L++
Sbjct: 1010 VMINTGFSERSELQRVKKLGNEV---------------------IVVTEKEKYAGLAVD- 1047
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
N + +EIKG+D+VRRD+S + + G ++ IL QS D+ + IH ++
Sbjct: 1048 -LNDERKTKREIKGLDIVRRDYSFIVKQIGNEILDIILSVQSQNR---DEIIGQIHSRLR 1103
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
K+ D+ + ++L +I KQLT+ P EY + PH VA RLN T K QGDTI Y
Sbjct: 1104 KLGKDIAQELLEISLFQIFKQLTRNPHEYANISVQPHAAVAQRLNATGKFKFHQGDTIGY 1163
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
IICEDG+ + ATQRAY++ E+ + L+ID YYL QQI PVV+RL PIE + +A+
Sbjct: 1164 IICEDGSGKPATQRAYHLTEVLESKDLRIDFQYYLVQQILPVVSRLCVPIEECNEAWVAQ 1223
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKY---QFCDKFEFTCMNPSCKQVNTVE 1081
LGLD+ YR K +I EEN+ +++ + ++C+ F+F C N CK V
Sbjct: 1224 ALGLDSVAYR---KHAIY--EENMDREEQSQSFPHYSLEYCESFKFVCPNDGCKHEFLVR 1278
Query: 1082 APTRLSTHG-VVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPG 1140
+G L++C C+ + +L N+L ++K I YY+ C+D G
Sbjct: 1279 ECMVQDDNGEQKLWLNDC--SVCRNSLLCFGAYLYNQLQLTLDKVISDYYKVSYVCDDIG 1336
Query: 1141 CSDLTRRCPLGLKTR---LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL---TKS 1194
C+ TR L TR C C + R Y+ +LY+QL F+H + D+ K + T+
Sbjct: 1337 CAYRTRTLVLEW-TREGVPCPRCKSGFMRREYSSKRLYEQLIFYHKLFDVAKVIDNFTEE 1395
Query: 1195 DTPSIKFDS---ETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
++ S E + ++++ + YN V L LFS
Sbjct: 1396 QRMKLRCGSGWKEANALLAGLLSLCDQYIADNQYNCVSLSYLFS 1439
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 130/242 (53%), Gaps = 17/242 (7%)
Query: 336 VVEKKEHKCAEWEAIQTEPS----------TSEPQVHSRTADDSLPLATDHENKKVFRMF 385
V+ K KC E +Q+E +P + A + T+ + + R +
Sbjct: 298 VMNKYSDKCIVEEVVQSETCFIWADRKKAVDEQPMKDNIAATFGSFMRTNSKGESTLRFY 357
Query: 386 FLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTK---EP 442
+LDAFED K PGTVYLFG++ + SCCVIV+NI R+++ LPR + L + +
Sbjct: 358 WLDAFEDPIKIPGTVYLFGRLI--NDGLSESCCVIVKNIWRQVFFLPREKLLINEVQTDE 415
Query: 443 VSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDL 502
V + QV E +I + K R EKK+A+N VP ++ LEV YS P L DL
Sbjct: 416 VDLTQVNEEVQKILRSMGVKVVKCRPCEKKFAYNDGVVPRSAQVLEVHYSFNDPRLSVDL 475
Query: 503 SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYE--VQCNQMEKI 560
SG+TFSHVF T ++ +E LL+E +KGPSW+E + ++S+ K+E V QM+ I
Sbjct: 476 SGETFSHVFNTTANAMERLLIETGMKGPSWVEISGCDVSSLQVSYVKHEFVVDMKQMKSI 535
Query: 561 RI 562
I
Sbjct: 536 SI 537
>gi|367026708|ref|XP_003662638.1| hypothetical protein MYCTH_2061829 [Myceliophthora thermophila ATCC
42464]
gi|347009907|gb|AEO57393.1| hypothetical protein MYCTH_2061829 [Myceliophthora thermophila ATCC
42464]
Length = 1483
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 282/722 (39%), Positives = 406/722 (56%), Gaps = 78/722 (10%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-KEGEETGEANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH FH + Y+ PDKQ + + + EE E + G+G
Sbjct: 785 LTNLAGNSWARTLTGTRAERNEYILLHEFHNQKYICPDKQPLRGRGRFDEENQEEDGGEG 844
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ + ++
Sbjct: 845 QKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTV-----DRTSVSGDE 899
Query: 681 EYLPEHQV--DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
E +P + ILP I++LVE R+ VK LMK PN + + + +DI+Q ALKLTANSM
Sbjct: 900 EGVPPVPTVKEEAILPKLIRRLVERRKVVKGLMKSPNATPENIATWDIKQLALKLTANSM 959
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLGF SRF+A+PLA L T KGREIL +TK L E+LN +VIYGDTDS+MI+ NV++
Sbjct: 960 YGCLGFTKSRFYARPLAVLTTFKGREILRSTKELAESLNLQVIYGDTDSVMINANVDNMR 1019
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G++ K++ NK Y++LE+DID +++ +LL KKKYAA+++ ++ NGK I E+KG
Sbjct: 1020 DALKVGSEFKNQVNKRYQRLEIDIDNIFRRILLQAKKKYAAINMVEV-NGKYIDKMEVKG 1078
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E ++ +IL + T+ S +Q IH ++++I + +P
Sbjct: 1079 LDMKRREYCPLSREVSTRILDEILSGED-TEVS----VQRIHAYLREISGKMREQAIPPA 1133
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG--TSEAAT 976
I QL KAP+EY + +P VQVALR K L++GD +SYII D TSE A
Sbjct: 1134 KYIILTQLGKAPKEYPNADNMPQVQVALR-ELARGKTLRKGDVVSYIITGDSKTTSEPAA 1192
Query: 977 QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY-- 1033
+RAY ++ LK +S L DV +YL +QI P V RL I GT ++A+ LGLD Y
Sbjct: 1193 KRAYTPQDVLKPDSGLTPDVEWYLGKQIFPPVERLCANIVGTSTAQLADNLGLDVRRYVN 1252
Query: 1034 ----RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQV----NTVEAPTR 1085
S E + L + V+++ C + C SCK V + R
Sbjct: 1253 NGASSSSSSGGKHDHEIHPLESQIPDAVRFRDCARLTLRCR--SCKASAPFEGLVGSADR 1310
Query: 1086 LSTHGVVFVLDECINPECKVPPYTYLPHL--INKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
++ GV C P CK LP L + ++ + +YYEGWL C+D C +
Sbjct: 1311 VTPSGV-----SC--PSCK----AILPTLSIVAQVESAVRAQTARYYEGWLVCDDSSCGN 1359
Query: 1144 LTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS 1194
TR RC P GL R CT +Y++ +E +Y QL +F + D+ +AL +
Sbjct: 1360 RTRQMSVYGSRCLGPKGL-GRGCTGRMRYEM----SERDMYNQLLYFASLWDVDRALKRV 1414
Query: 1195 DTPS---------------------IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKL 1233
+ + + +K VE++LE V + L
Sbjct: 1415 SASADGGGGGGGGEALPPGELRDNVVALADHNRTRFSTVKGVVEKYLEKCGRQWVAMDTL 1474
Query: 1234 FS 1235
FS
Sbjct: 1475 FS 1476
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 89/160 (55%), Gaps = 5/160 (3%)
Query: 398 GTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFD 453
G++ LFGKV K+ + SC V V NI RK+Y LPR ++ T E V + VY E D
Sbjct: 364 GSLCLFGKVLNKKTGRYVSCFVKVDNILRKLYFLPRKHRVRGGVETTEQVEMMDVYQEVD 423
Query: 454 QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGT 513
I T+ + K + +KYAF LP +P ++YL++ Y P L G+TFSHVFGT
Sbjct: 424 AIMTKMNVQMHKIKACTRKYAFELPDIPAEAQYLKLLYPYTKPPLELGTKGETFSHVFGT 483
Query: 514 KSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCKYEV 552
+S E +L +KI GP WL +A+ R S C+ EV
Sbjct: 484 NTSLFEQFVLWKKIMGPCWLRIEDADFGALRNASHCRLEV 523
>gi|388583787|gb|EIM24088.1| hypothetical protein WALSEDRAFT_59081 [Wallemia sebi CBS 633.66]
Length = 1399
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 278/698 (39%), Positives = 405/698 (58%), Gaps = 48/698 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKG-- 618
++TN+ GN RTL GGRSERNEF+LLH FH + + PDK +KK + A G
Sbjct: 714 QLTNLAGNSWGRTLTGGRSERNEFILLHEFHRQKMICPDKLSRFDKKAAQLEAAAENGDD 773
Query: 619 ------KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
KG +K + GGLV EPKKG +DK+I++MDFNSLYPSIIQEYNI FTT+ R
Sbjct: 774 EATTKKKGGRKDKFKGGLVFEPKKGLWDKYILVMDFNSLYPSIIQEYNIDFTTVE-RPED 832
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
D + +P G+LP I LV R+QVK LMK N + LMQ DIRQ ALK
Sbjct: 833 DDNGEEKIPEIPAPGSGQGVLPKLIATLVNRRKQVKNLMKDKNATPAKLMQLDIRQMALK 892
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
LTANSMYGCLGF SRF+A+PLAAL T KGREIL +T+ L E++ +V+YGDTDS+ I+
Sbjct: 893 LTANSMYGCLGFEGSRFYARPLAALTTFKGREILTHTRELAESMQLDVVYGDTDSVFINS 952
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
N YD K+ N+ K N YK LE+D+DGV+K +LLL+KKKYAA+ K++ GK
Sbjct: 953 NAYSYDDALKVANEFKKHVNDRYKLLEIDLDGVFKRLLLLQKKKYAAI---KMAEGKE-- 1007
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
S EIKG+D+ RR++SQL+ ++V+ QIL + S + +++IH+++ ++ + N
Sbjct: 1008 STEIKGLDMKRREYSQLSKNVSQYVLDQIL-----SGDSTEVVVEHIHDYLTEMGESIRN 1062
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE--DG 970
G VPL I K+L K PE+Y D K+ PHVQVA+R+ + K GD ISY+ C DG
Sbjct: 1063 GKVPLDDYIINKRLGKDPEQYPDSKSQPHVQVAMRMKSKGGTA-KSGDVISYVFCASPDG 1121
Query: 971 TSE--AATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
+ + AY+ E+L+ +S L +D YY++ Q+ P + RL + IEGTD R+AECLG
Sbjct: 1122 VASKTGKAENAYHPEDLRRKDSNLSLDYEYYITSQVLPPIERLCDNIEGTDRSRLAECLG 1181
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ----VNTVEAP 1083
LD + +++ + E L +++ +++ +KF C P C + + +++
Sbjct: 1182 LDPARFQNHSAGNSNDKEFQTLESQMSDKERFRNAEKFSIRC--PGCTEHTEFGSMLDST 1239
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLIN-KLSQDMNKYIVKYYEGWLKCEDPGCS 1142
+ T G+V C + +PP + +N +L + ++I KYY+ L C D C
Sbjct: 1240 NSVQTRGIV-----CQSCSNILPPGS-----VNIQLEMQLRQFIAKYYDANLVCNDQSCG 1289
Query: 1143 DLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFD 1202
+ TR + K L + C H Y + LY Q+ +F + D+ + L +S++ S +
Sbjct: 1290 NKTRMMSVYGKRCLMSNCLGVMKHE-YDDQMLYNQMLYFARLFDVERILKQSNSSSNYAE 1348
Query: 1203 SETYMGYCK-----MKQHVERFLESSAYNIVDLKKLFS 1235
+ K + V +FLE +A ++V L +FS
Sbjct: 1349 IQVLCEKNKPLLQVLHNTVSKFLERNARSVVSLTDIFS 1386
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 10/195 (5%)
Query: 376 HENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE 435
+++ R ++LD ED G V LFGK + E S V ++ I R ++++PR
Sbjct: 280 YDDDGCVRFYWLDYMED----HGRVVLFGKAYDTEAKKWQSTSVTIEGIQRNLFVVPRQF 335
Query: 436 HL-----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEV 489
L +T E V V++E + I KI + ++ +++ YAF VP + +++L+V
Sbjct: 336 KLDDDENETGEIVEKTDVFTEMESIRKASKIKSWAAKFVKRSYAFEEKDVPREETDWLKV 395
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
Y PA+P ++G TFSHVFGT++S E +++R+I GP WL+ +A +WCK
Sbjct: 396 LYGFNEPAMPLGMTGKTFSHVFGTQTSPFELFVVKRRIMGPCWLKLEDAYVTQKGTTWCK 455
Query: 550 YEVQCNQMEKIRITN 564
++ + ++ N
Sbjct: 456 HQFTVTDPKTVQFFN 470
>gi|356496908|ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Glycine max]
Length = 1512
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 294/705 (41%), Positives = 407/705 (57%), Gaps = 87/705 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-------- 612
++TN+ GN+ +TL G R++R E+LLLH FH +++PDK + + KE +ET
Sbjct: 785 QLTNISGNLWGKTLQGARAQRVEYLLLHTFHAMKFMVPDK-FSYHAKETKETKLMKRRLT 843
Query: 613 ---------------------GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
EA+ K +K +Y+GGLVLEPKKG YDK+I+L+DFNSL
Sbjct: 844 HDVEDNNFDAYIDDANHDNDASEADNKKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSL 903
Query: 652 YPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALM 711
YPSIIQEYNICFTT+ R L +S LP + TG+LP +K LV+ R+ VK+ +
Sbjct: 904 YPSIIQEYNICFTTVE-RSLDES-----FPRLPSSKT-TGVLPEVLKNLVDRRKMVKSWI 956
Query: 712 KQ---PNLSSD--LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREIL 766
K N +D + Q DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T++GREIL
Sbjct: 957 KNEKNKNEKTDPIRVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITSQGREIL 1016
Query: 767 LNTKSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGV 825
+T LV+N LN EVIYGDTDS+MI +++ + KI ++ E NK YK LE+D+DG+
Sbjct: 1017 QSTVDLVQNNLNLEVIYGDTDSIMIYSGLDEIEEANKIAVRVIQEVNKKYKCLEIDLDGL 1076
Query: 826 YKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ 885
YK MLLLKKKKYAA+ + +G + E KG+D+VRRDWS LA E G F ++QIL
Sbjct: 1077 YKRMLLLKKKKYAAVKL-LYKDGTPYEAIERKGLDIVRRDWSILAKELGDFCLTQIL--- 1132
Query: 886 SYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVA 945
+ S +D +++IH + K++ ++ NG V L ITK LTK PE Y D K PHV VA
Sbjct: 1133 --SGGSCEDVVESIHNSLMKVQEEMRNGQVALEKYVITKTLTKPPEAYPDAKNQPHVLVA 1190
Query: 946 LRLNNTN-SKKLKQGDTISYIICED-----GTSEAATQRAYNIEELKNN-SKLKIDVNYY 998
RL S GDTI YIIC + G++ QRA + +ELK + ID++YY
Sbjct: 1191 QRLKQQGYSSGCSVGDTIPYIICYEQGGSPGSAAGIAQRARHPDELKRDQGTWLIDIDYY 1250
Query: 999 LSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVK 1058
LSQQIHPVV+RL PI+GT R+A+CLGLD+S + + E++ + L +E +
Sbjct: 1251 LSQQIHPVVSRLCAPIQGTSPERLADCLGLDSSKFHHKSSEALNDDSASPLSFVADDEER 1310
Query: 1059 YQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDE-----CINPE----------- 1102
Y+ C+ +C PSC T + P + + + E + PE
Sbjct: 1311 YRGCEPLVLSC--PSCS--GTFDCPPVFKS--ICLLGSERQRPTSVAPEEAEYNFWRKLC 1364
Query: 1103 C-KVPPYTYLPHLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCT 1158
C K P P +I N++ + ++I+ YY G L C+D C TR L L + T
Sbjct: 1365 CPKCPDVKISPVMIANQVKRQAERFILMYYRGLLVCDDETCKHTTRSISLRLVGDSERGT 1424
Query: 1159 TCHKY-----KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS 1198
C Y +L R YTE LY+QLS+F ++ D + K + S
Sbjct: 1425 VCPNYPRCNGRLVRKYTEADLYKQLSYFCHVFDTVSCIEKMEAKS 1469
Score = 121 bits (303), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 28/212 (13%)
Query: 375 DHENKKVFRMFFLDAFEDIYKQ-PGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
D E F + LDA+E+ Y + GT+YLFGKV K + + SCC+IV+N+ R IY +P
Sbjct: 315 DLEKDGSFFFYILDAYEEFYGENRGTLYLFGKV--KTGDLYQSCCIIVKNMQRCIYAVPS 372
Query: 434 SEHLKTKEPVS----------------------IAQVYSEFDQIATQYKILDFKSRKIEK 471
+T+E +S ++ V +E Q ++ +F +++
Sbjct: 373 LSLHRTEEMMSLERDVQESRISSADFFKKLQDAVSDVKNEIAQHLVNLEVSNFSMAPVKR 432
Query: 472 KYAFNLPGVPDLSEYL-EVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGP 530
KYAF +P Y+ ++ YS K P LP DL G++F + GT S LE L++RKIKGP
Sbjct: 433 KYAFERSEIPAGENYVVKINYSFKDPVLPVDLKGESFCALLGTGCSALELFLIKRKIKGP 492
Query: 531 SWLEFP--EAEKFPSRISWCKYEVQCNQMEKI 560
SWL+ R+SWCK+EV + ++I
Sbjct: 493 SWLQVSNFSPSSASRRVSWCKFEVTVDSPKQI 524
>gi|393236145|gb|EJD43695.1| hypothetical protein AURDEDRAFT_88520 [Auricularia delicata TFB-10046
SS5]
Length = 1449
Score = 454 bits (1169), Expect = e-124, Method: Compositional matrix adjust.
Identities = 267/700 (38%), Positives = 411/700 (58%), Gaps = 45/700 (6%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN-----KKEGEETGE 614
+++TN+ GN ++TL GGR+ERNE++LLH F++ Y+ PDK YGK K E EE +
Sbjct: 766 LQLTNLAGNAWNKTLNGGRAERNEYILLHEFYKLGYICPDKTYGKKSALAVKAEAEEGDD 825
Query: 615 ANK--GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
A KG K+ Y GGLVL+PK+G +DK+I++MDFNSLYPSIIQEYNI +TTI +
Sbjct: 826 AAAVTSKG-KRDKYKGGLVLQPKRGLWDKYILVMDFNSLYPSIIQEYNIDYTTIDISQFL 884
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
D+D L E P+ G++P IK+LV+ R+QVK LMK PNL QYDIRQ+ALK
Sbjct: 885 DTD--ELPEK-PDADKAEGVMPRVIKELVQRRQQVKKLMKAPNLPEARRKQYDIRQQALK 941
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
LTANSMYGCLGF SRF+A+PLAAL T GRE L T + E + +V+YGDTDS+ ++
Sbjct: 942 LTANSMYGCLGFEYSRFYARPLAALTTFMGREALRRTCEVAEGMGIDVVYGDTDSVFLNS 1001
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
N +I N+ K N+ YK+LE+D+DG+++ +LLL+KKKYAAL + K
Sbjct: 1002 NKLTIKEAKEIANEFKKLVNEQYKRLEIDLDGIFERLLLLQKKKYAALKVDGTDENK-TT 1060
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
++E+KG+D+ RR++ L+ + + ++ ILD + +D ++ IHE + +R ++ +
Sbjct: 1061 TKEVKGLDMKRREYCALSKDMSQKILDVILDPKMSSDVV----VEKIHEGLIALRENVTS 1116
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTS 972
G +PL I K+L K PE Y D K+ PHVQVALR+ N+ + GD I Y+ C+
Sbjct: 1117 GNIPLEQFIINKRLGKEPEAYPDGKSQPHVQVALRMKLRNATA-RAGDVIPYVFCKSDAD 1175
Query: 973 EAA-TQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
+A+ +A++ +E+ K+ KL+ID ++YL+ QI P RL +PIEGTD R+AECLGLD
Sbjct: 1176 KASQADKAHHPDEVRKSGGKLQIDYDFYLANQILPPAERLCDPIEGTDRARLAECLGLDP 1235
Query: 1031 SLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMN-------PSCKQVNTV 1080
Y+ + + ++EE G E++ +++ C+ F C S Q ++
Sbjct: 1236 RRYQVTV---VGETEERAFGSLESQVPDTERFKECEPFVVRCRGCTNSFAFSSLGQTDSA 1292
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPG 1140
E + G+ C+ P CK P T + +L + +++ ++YEGW C++
Sbjct: 1293 EGDQK--NAGITPA--GCLCPGCKKPLGTASVQV--QLEMQIRRHVSRFYEGWTVCQEAT 1346
Query: 1141 CSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
C TR + + L C K+ Y + +Y QL++ + D KA++K+ + +
Sbjct: 1347 CRHRTRMMSVYGRRCLKPGCTG-KVALEYQDAAIYTQLAYLRSLFDGDKAISKAKA-ARQ 1404
Query: 1201 FDSETYMGYCK-----MKQHVERFLESSAYNIVDLKKLFS 1235
+ +G + + V+R+++ VD+K++FS
Sbjct: 1405 DELRALVGLNRGLLEDLLSSVDRYMDMCGRRWVDMKEMFS 1444
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 12/191 (6%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
E+ FR F+LDA+E G V+ GK K+ + SCCV V+N++R +Y+L R +
Sbjct: 333 ESDGSFRFFWLDAYE----ADGKVHFIGKCRDKDTKAWISCCVTVENMERNLYVLKRQKQ 388
Query: 437 LKTKE------PVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSE-YLEV 489
L E P V+++ I Q I +K++ +E++YAF +P +LEV
Sbjct: 389 LDDDENETDIIPTD-EDVWADVAAIRRQAGISSWKAKWVERQYAFGEKDIPTGKHPWLEV 447
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
YS PALPS++ + + GT +S E L+++R+I GP WL + K ISW +
Sbjct: 448 VYSFNHPALPSNIMTPNIARILGTNTSAFELLVMKRRIMGPCWLNIKQPTKTEKPISWTR 507
Query: 550 YEVQCNQMEKI 560
+EV + E I
Sbjct: 508 FEVIVSNPEDI 518
Score = 40.0 bits (92), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 81 DENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVEDGREIF 122
D ++YEEVSE++Y V R Q DD++ DDG GY ++G + F
Sbjct: 54 DTDIYEEVSEEQYNAIVKGRLQRDDFVQDDGVGGYQDNGMDDF 96
>gi|400595091|gb|EJP62901.1| DNA polymerase [Beauveria bassiana ARSEF 2860]
Length = 1462
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 285/721 (39%), Positives = 408/721 (56%), Gaps = 59/721 (8%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ +
Sbjct: 760 IAALAISVQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQIFR 818
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+++ E E G+G+KK + GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICFT
Sbjct: 819 GRQKASEENEDEAGQGKKKDKFKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICFT 878
Query: 665 TIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
T+ +L + D +P+ Q D GILP I LV RRQVK+LMK N +++ L +
Sbjct: 879 TVDRTILSEDD--DAVPEVPKDQ-DQGILPKLISTLVGRRRQVKSLMKDKNATAEQLATW 935
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGD 784
DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYGD
Sbjct: 936 DIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTFKGREILRSTKELAESRSLQVIYGD 995
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+MI+ NV+ FK+GN K N+ Y+ LE+DID V++ +LL KKKYAA+++ +
Sbjct: 996 TDSVMINANVDSVADAFKVGNDFKRAVNEQYRLLEIDIDNVFRRILLQAKKKYAAINLVE 1055
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+GK I E+KG+D+ RR++ L+ E K ++ +IL + ++ + IHE+++
Sbjct: 1056 -KDGKFIEKMEVKGLDMRRREYCALSKEISKRLLDEIL-----SGAETEEAVSRIHEYLR 1109
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
+ +P+ I QL K P EY + ++P VQVALR + K +++GD +SY
Sbjct: 1110 DTAAKMREQTIPVAKYIIFTQLGKGPAEYPNADSMPQVQVALR-DLARGKTVRKGDVVSY 1168
Query: 965 IICEDG-TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIA 1023
II DG +SE +RA+ +LK + L DV +YL +QI P V RL I GT ++A
Sbjct: 1169 IITGDGKSSEPPAKRAHAPGDLKTDPSLVPDVEWYLGKQIFPPVERLCANIVGTSTSQLA 1228
Query: 1024 ECLGLDTSLYRSQIKESIQQSEENILGVGEAE-----EVKYQFCDKFEFTCMNPSCKQVN 1078
E LGLD Y S ++ Q S + L + E EV++ C + C CK
Sbjct: 1229 EQLGLDVRRYNSL--QTQQNSASDDLEIHPLESQIPDEVRFADCTRLALRCRK--CKSST 1284
Query: 1079 TVE----APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWL 1134
E AP R+S G+V I P + + H I S +YYEGWL
Sbjct: 1285 PFEGLASAPDRVSASGIVCGACNAIIPNISI--VAQVEHAIRVQS-------TRYYEGWL 1335
Query: 1135 KCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYIC 1185
C+D C + TR RC P GL R C +Y+ YTE +Y QL +F +
Sbjct: 1336 VCDDSQCGNRTRQMSVYGTRCLGPKGL-ARDCLGRMRYE----YTEKAIYNQLVYFASLW 1390
Query: 1186 DITKALTK---SDTPSIKFDSETYMG--------YCKMKQHVERFLESSAYNIVDLKKLF 1234
D+ +A T+ +D+ D E + + +K V+R+L+ V + LF
Sbjct: 1391 DVERARTRAAGADSGMTSQDREKVLALAEHNRVRFGTVKGIVDRYLDKCGRQWVAMDSLF 1450
Query: 1235 S 1235
+
Sbjct: 1451 A 1451
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 159/589 (26%), Positives = 268/589 (45%), Gaps = 79/589 (13%)
Query: 52 IDKTNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDD 108
+ K N A +LK L+ G K Y+ +Y+EV E Y + V R +DD++ D
Sbjct: 1 MSKVNHRAKLAELKALRKAGKKAFDSYQVEDVNALYDEVDEDGYKKIVRDRLNQDDFVVD 60
Query: 109 DGGDGYVEDGREIFD--------DDIEDVP----QKKEKHDKRKKNKNIQNPNAKGDIQK 156
D G+GY +DGRE +D D+ED+P Q K K R+ + +++ N + +
Sbjct: 61 DNGEGYADDGREDWDRVRQYDSESDLEDLPTRGRQSKSKKASRQAEQAMRDVNDRNISEY 120
Query: 157 LLANMPVKKKKKEEVQLNND-DVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA 215
N ++K + V+ +D D +A+LL EV++ I PAP
Sbjct: 121 FTKNATKPQQKPKIVKTEDDEDFMANLLGEVDSNI--------------------PAPAP 160
Query: 216 KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEE----PVDD 271
+ S E++ + + P P + K D+ + + S ++ P+D+
Sbjct: 161 RPSKQQRSG----ERRKSRALSPPPEPAGKKQKRRDTRLLSPSSAIPPSDDDGYMPPLDE 216
Query: 272 GLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA-VELST 330
++ D + + Q K +L+ E E EE ++V + SV++A V L++
Sbjct: 217 DPIPVGEVPMSDPTPSSPAAKVAQRKAQLRHEIKEDSDDEETMEVAHAASVTTASVNLAS 276
Query: 331 SPPPQVVEKKEHKCAEW-----EAIQTEPSTSEPQVHSRTADDSLPLAT------DHENK 379
S P + + K+E + A+ S+S ++ + S P T DH++
Sbjct: 277 SRPIKKLRKQEPYPSPASSSPVNAVDDVDSSSWNKLTEKLNVVSNPSETRGVGKIDHKDA 336
Query: 380 ---KVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
FF + +I+ G++ LFGKV K+N + SC V V NI RK+Y LPR
Sbjct: 337 IEADGSLSFFWTDYTEIH---GSLCLFGKVLNKKNQEYVSCFVKVDNILRKLYFLPREHR 393
Query: 437 LK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYS 492
L+ T E V + VY+E D + T+ + +K + +KYAF LPGVP ++Y+++ Y
Sbjct: 394 LRDGEETDESVEMMDVYNEVDDLMTKMNVGMYKIKACTRKYAFELPGVPKEAQYMKLLYP 453
Query: 493 AKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKY 550
+ S + G+TFSHVFG+ ++ E +L + + GP WL+ +A+ F + S CK
Sbjct: 454 YTKQQIDSSIIGETFSHVFGSNTALFEQFVLWKNVMGPCWLKIEDAD-FGAIKNASHCKL 512
Query: 551 EVQCNQMEKIRITNVCGN----------VLSRTLMGGRSERNEFLLLHA 589
EV + + + N V RT + + E L + A
Sbjct: 513 EVLAEHPNMLSVASESDNLDAPPLTMMSVALRTAFNAKENKQEILAISA 561
>gi|156048094|ref|XP_001590014.1| hypothetical protein SS1G_08778 [Sclerotinia sclerotiorum 1980]
gi|154693175|gb|EDN92913.1| hypothetical protein SS1G_08778 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1458
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 281/712 (39%), Positives = 407/712 (57%), Gaps = 48/712 (6%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K
Sbjct: 767 IAALALKVQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKAVFK 825
Query: 605 NKKE-GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
K++ EE + G +KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICF
Sbjct: 826 GKQQVEEENADEESGDVKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICF 885
Query: 664 TTIPVRMLQDSDITTLCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
TT+ L D + + +PE D GILP I LV RRQVK+LMK + +S+ L
Sbjct: 886 TTVDRLNLSDDE-----DRVPEVPTDQEQGILPKLIATLVSRRRQVKSLMKDKHATSEQL 940
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVI 781
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VI
Sbjct: 941 ATWDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKDLAESKSLQVI 1000
Query: 782 YGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
YGDTDS+MI+ NV++ +GN K N YK LE+DID V++ +LL KKKYAA++
Sbjct: 1001 YGDTDSVMINANVDNIQDALAVGNDFKRSVNDRYKLLEIDIDNVFRRILLQAKKKYAAIN 1060
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ ++ +GK + E+KG+D+ RR++ L+ E V SQ+L+E D S + + IH+
Sbjct: 1061 LVQV-DGKFVDKMEVKGLDMKRREYCNLSKE----VSSQLLNEILSGDDS-EAVITRIHD 1114
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
++++I T + G VP+ I +L KAP++Y + +P VQVALR K++++ D
Sbjct: 1115 YLREISTKMREGNVPVQKYTIYTKLGKAPKDYPNADNMPQVQVALR-ELAKGKQVRKDDV 1173
Query: 962 ISYIICEDG-TSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
I+YI+ +G TSE A +R++ ++ +K +S LK DV +YL +QI P V RL I GTD
Sbjct: 1174 IAYIVTGEGKTSENAAKRSFTPQDVMKRDSDLKPDVEWYLYKQIFPPVERLCANISGTDT 1233
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNT 1079
VR+A+CLGLD Y S +E I + + +F D T SCK
Sbjct: 1234 VRLADCLGLDARKYSINNNNSSGSNEAEIHPLESQIDDSVRFKDSSRLTLRCRSCKATFG 1293
Query: 1080 VEAPTRLSTHGVVFVLDECINPE---CKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC 1136
E G++ + C +P C+ ++ +L + + KYYEGWL C
Sbjct: 1294 FE--------GLLNSTENC-SPSGIICRCGNILSTLSIMTQLEHQIRQETCKYYEGWLVC 1344
Query: 1137 EDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDI 1187
+D C + TR RC P GL + C +Y+ YTE +Y QL +F + D+
Sbjct: 1345 DDQACGNRTRQMSVYGYRCLGPKGL-AQGCLGKMRYE----YTEKMMYNQLLYFASLFDV 1399
Query: 1188 TKALTKSDTPSIKFDS----ETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
KA + + S + + +K V+++L+ V + LF
Sbjct: 1400 DKAKANARGTEKEIVSALAEHNRVRFGTLKNVVDKYLDKCGRQWVAMDSLFG 1451
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 163/584 (27%), Positives = 244/584 (41%), Gaps = 76/584 (13%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A F +L+ L+ G K YE +E++YEEV E+ Y + V R +DD++ DD G+GY
Sbjct: 9 AKFAELRALRESGKKRLDTYEVHQEEDLYEEVDEEGYKKVVRNRLNQDDFVIDDNGEGYA 68
Query: 116 EDGREIFDDDI---------EDVPQKKEK------------HDKRKKNKNIQNPNAKGDI 154
+DGRE +D D E++P K + K +K I N KG +
Sbjct: 69 DDGREDWDRDHRQGYGTESEEELPVKGKNGKAAKRKREEEKVKKENMDKGISNYFTKGPV 128
Query: 155 QKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIA---PTLKLNTKTNEIVIPKEEPP 211
PVK K E D L LL +V+ + P ++T E + P
Sbjct: 129 AAQQKPKPVKTKADE-------DFLEGLLGQVDMNVPRWKPETSRASRTQEKRRTRALSP 181
Query: 212 APTAKEYLANFSKPIKVEKKIEKPIKKEP-SPLKDEIKSNDSVME----VEMNVAEQSKE 266
A ++ SK KV I P SP +D M +M + E
Sbjct: 182 ALNDSRHM---SKRTKVADSRPTGITNAPPSPPPAYTSGDDDFMAGFDDDDMPMDEPQPS 238
Query: 267 EPVDDGLWEQMQID---DWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVS 323
PV + ++ I+ + D + +V P I A S +I ++
Sbjct: 239 SPVAKAVERRLHINVKEEEDEDEDMMEVAPADG-----ITAT-SVNISGTRPPPRLKKEL 292
Query: 324 SAVELSTSPPPQVVEKKEHKCAEW-EAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVF 382
L++SPP V+ E + W + Q S Q + L E
Sbjct: 293 YPTPLTSSPPHGSVD--EVDASSWNDVTQKLNVMSSSQPSETMSFGKLDYNDAIEEDGSL 350
Query: 383 RMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK---- 438
MF+ D E G++ LFGKV K+ + SC + V NI RK++ LPR +
Sbjct: 351 HMFWTDYTE----INGSLCLFGKVKNKKTGNFFSCFLKVDNILRKLFFLPRQYRKRHGRD 406
Query: 439 TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPAL 498
T + V + VY E D + T+ + K + +KYAF LP +P EYL++ Y AL
Sbjct: 407 TTDEVDMKDVYEEVDDMMTKMNVGMHKIKPCTRKYAFELPDIPKEGEYLKLLYPYSKSAL 466
Query: 499 PSDL-SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCN 555
+D SG TFSHVFG+ + E +L + I GP WL+ +A+ F + S CK EVQ +
Sbjct: 467 HADQHSGSTFSHVFGSNTPLFEQFVLWKNIMGPCWLKIEDAD-FGALKNASHCKLEVQVS 525
Query: 556 QMEKIRITNVCGN----------VLSRTLMGGRSERNEFLLLHA 589
+ I N N + RT+ + + E L + A
Sbjct: 526 KPNLITPINDSDNLEAPPLTLMSIALRTVFNVKENKQEILAISA 569
>gi|407927318|gb|EKG20213.1| DNA-directed DNA polymerase family B pol2 [Macrophomina phaseolina
MS6]
Length = 1467
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 282/673 (41%), Positives = 399/673 (59%), Gaps = 45/673 (6%)
Query: 537 EAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYV 596
EA+ F I+ +VQ + K+ +TN+ GN RTL G R+ERNE++LLH FH Y+
Sbjct: 753 EADTF--FIAAIALKVQMLPLTKV-LTNLAGNSWGRTLGGTRAERNEYILLHEFHRNKYI 809
Query: 597 LPDKQYGK-NKKEGEETGEANKGKGRKKAAYSGG-LVLEPKKGFYDKFIILMDFNSLYPS 654
PDK +GK NKK EET E +G KK G LV EP+KG YD+FI++MDFNSLYPS
Sbjct: 810 CPDKVFGKGNKKPSEETIEGEEGADAKKKDKYKGGLVFEPEKGLYDRFILVMDFNSLYPS 869
Query: 655 IIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP 714
IIQE+NICFTT V + S+ +P D GILP I LV RR+VK LMK P
Sbjct: 870 IIQEFNICFTT--VERAEISEEEEKVPEVPSASQDQGILPRLIATLVSRRREVKKLMKDP 927
Query: 715 NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE 774
+ SSD L +DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL TK L E
Sbjct: 928 SASSDQLATWDIKQMALKLTANSMYGCLGYTKSRFYARPLAMLTTYKGREILRRTKDLAE 987
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKK 834
+ VIYGDTDS+MI+ N+++ FK+GN+ K + N YK LE+DID V++ +LL K
Sbjct: 988 SKMLRVIYGDTDSVMINTNMDNLQDAFKVGNEFKRDVNDSYKLLEIDIDNVFRRLLLHAK 1047
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
KKYAA+++ ++ +GK E+KG+D+ RR++ L+ E +++ +L + +
Sbjct: 1048 KKYAAINMVEV-DGKWTEKLEVKGLDMRRREYCALSKETSSKLLNFLLSGEDP-----ET 1101
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
++ IHE+++++ + + VP+ I QL K P+EY + ++P VQVALRL K
Sbjct: 1102 VVEKIHEYLRELAAQMRDFKVPVQKYTIFTQLGKDPKEYPNGNSMPSVQVALRL-MAKGK 1160
Query: 955 KLKQGDTISYIICED--GTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+K D +S++I + G++E A + AY +EE LK +S L+ D++YYL +QI P V RL
Sbjct: 1161 HVKAKDVMSFVITGESGGSAETAAKNAYTLEEVLKPDSGLRPDIDYYLHKQILPPVERLC 1220
Query: 1012 EPIEGTDAVRIAECLGLDTSLYR-SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCM 1070
PI GT+ R+AECLGLDTS YR S + + Q E + L +EV+++ D FT
Sbjct: 1221 APIAGTNVTRLAECLGLDTSKYRVSTLSSNSQDVEIHPLESQIPDEVRFK--DSLPFTLR 1278
Query: 1071 NPSCKQVNT----VEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYI 1126
PSCK + + P +S G++ C N C+ T + ++L + ++
Sbjct: 1279 CPSCKHQSPFRGLAKTPEMVSHEGLM-----CNNTSCRRALSTL--SISSQLEAQIRQHT 1331
Query: 1127 VKYYEGWLKCEDPGCSDLTR-------RCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQ 1177
+YY GWL C+DP C TR RC LG + R C Y+L + +Y Q
Sbjct: 1332 ARYYAGWLVCDDPACGARTRQMSVYGHRC-LGPQGRGLGCAGRMSYEL----GDKAMYNQ 1386
Query: 1178 LSFFHYICDITKA 1190
L + + D+ KA
Sbjct: 1387 LLYLQSLFDVDKA 1399
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 236/541 (43%), Gaps = 73/541 (13%)
Query: 55 TNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGG 111
++ A +L+ L+ G Y+ ++ +YEEV E+ Y + V R +DD++ DD G
Sbjct: 2 ASRAARLAELRALRAAGKTRLDSYQVEEEKQLYEEVDEEGYKKVVRSRLDQDDFVVDDNG 61
Query: 112 DGYVEDGREIFDDDIEDVPQK----------KEKHDKRKKNKNIQNP-NAKGDIQKLLAN 160
+GY +DGRE D D E +P+ + K KRK+ ++ + AK I K +
Sbjct: 62 EGYADDGRE--DWDTERLPRYDSESEEEQPLRGKAAKRKREEDRERKEKAKNGINKYFSA 119
Query: 161 MPVKKKKKEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
K + +D +ADLL EV+ + P+ +P +
Sbjct: 120 QAATAASKPKPMKTAEDEAFMADLLGEVDANVPSR------------PRMKPVRSDTRRK 167
Query: 219 LANFSKPIKVEKKIEKPIKKE-PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQM 277
S P++ K + ++ E PS + D S ++ + + P DD + M
Sbjct: 168 TRVLSPPLEDRKPKPRQVQAEDPSVMADTPPSASAL-------DDDNYIPPADDDM--MM 218
Query: 278 QIDDWDNSQQTQDVLPEQAKVELQI------------EAIESQSIEEK-VDVTNVESVSS 324
+S T+ V + ++V ++ +A+ I V++T V
Sbjct: 219 SDPPLPSSPVTKAVERKFSQVNVKAEEEEDDDLMEVEQAVGHTGIRTAGVNMTGSRPVPK 278
Query: 325 AVELSTSP------PPQVVEKKEHKCAEWEAIQTEPST-SEPQVHSRTADDSLPLATDH- 376
+ P PP+ ++ + W + + S P V TA + + +H
Sbjct: 279 IKKQDAYPTPNSSSPPRPAQETAVDASAWNKVTNNLNVVSSPAVE--TAYSAGKIRPEHA 336
Query: 377 -ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE 435
E R F++D E G++ LFGK+ K S S V + NI RK++ LPR
Sbjct: 337 LEEDGSLRFFWIDYTE----VKGSLCLFGKIRDKSTGSFVSAFVKIDNILRKLFFLPREY 392
Query: 436 HLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY 491
K T+E V + VY E D + +++++ K + +KYAF L +P +EYL++ Y
Sbjct: 393 RQKHGRDTEEEVGMGDVYQEVDGLMSRFQVDMHKIKPCTRKYAFELREIPKEAEYLKLLY 452
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKY 550
LP DL G+TFSHVFGT +S E +L + I GP WL+ A + SWCK
Sbjct: 453 PYTKQQLPMDLKGETFSHVFGTNTSIFEQFVLWKNIMGPCWLKIDGANLNAVNNASWCKL 512
Query: 551 E 551
E
Sbjct: 513 E 513
>gi|322709417|gb|EFZ00993.1| DNA polymerase alpha catalytic subunit, putative [Metarhizium
anisopliae ARSEF 23]
Length = 1464
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 287/724 (39%), Positives = 405/724 (55%), Gaps = 63/724 (8%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--Y 602
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ
Sbjct: 760 IAALALSVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQSFR 818
Query: 603 GKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNIC 662
G+ K+E E EA +K G LV EP+KG YDKF+++MDFNSLYPSIIQE+NIC
Sbjct: 819 GRQKREDENQEEATGEGKKKDKYKGG-LVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNIC 877
Query: 663 FTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
FTT+ L D + +P Q D GILP I LV RRQVKALMK N + + L
Sbjct: 878 FTTVDRTALADDE--DAVPEVPADQ-DQGILPRLIATLVGRRRQVKALMKDKNATPEQLA 934
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIY 782
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIY
Sbjct: 935 TWDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESKSLQVIY 994
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
GDTDS+MI+ NV+ F++GN+ K N YK LE+DID V++ +LL KKKYAA+++
Sbjct: 995 GDTDSVMINANVDSVADAFRVGNEFKRAVNDQYKLLEIDIDNVFRRILLQAKKKYAAINL 1054
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL--DEQSYTDYSLDDRLQNIH 900
+ +GK + E+KG+D+ RR++ L+ E K ++ +IL DE + IH
Sbjct: 1055 IE-KDGKFVEKMEVKGLDMRRREYCALSKEISKHLLDEILSGDEAEVA-------ITRIH 1106
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
E+++ I + +P+ I QL K P EY + ++P VQVALR + K +++GD
Sbjct: 1107 EYLRDIAGKMREQSIPVAKYIIYTQLGKGPTEYPNADSMPQVQVALR-DIARGKTIRKGD 1165
Query: 961 TISYIICEDGT-SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+SYII DGT SE A +RAY +LK++S L DV +YL +QI P V RL I GT
Sbjct: 1166 VVSYIITGDGTSSEPAPKRAYAPADLKSDSTLVPDVEWYLGKQIFPPVERLCANIVGTST 1225
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAE-----EVKYQFCDKFEFTCM--NP 1072
++AE LGLD Y S ++ Q S + L + E EV++ C + C
Sbjct: 1226 SQLAEQLGLDIRRYSSN--QTQQNSSNDDLEIHPLESQIPDEVRFGDCARLSLRCRKCKA 1283
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
S K V +P R+S GV+ C +P + ++ ++ + +YYEG
Sbjct: 1284 STKFEGLVVSPDRVSASGVL-----CGGCGAVIPTLS----VVAQVEHAVRSQTSRYYEG 1334
Query: 1133 WLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHY 1183
WL C+D C + TR RC P GL R C +Y+ YTE +Y QL +F
Sbjct: 1335 WLVCDDSQCGNRTRQMSVYGTRCLGPKGL-ARDCLGRMRYE----YTEKAIYNQLVYFSS 1389
Query: 1184 ICDITKALTKS-DTPSIKFDSETYMGYCKMKQH-----------VERFLESSAYNIVDLK 1231
+ D+ KA +K+ DT + + + +H V+++L+ V +
Sbjct: 1390 LWDVDKARSKATDTNNSTLSRQGRDTILALAEHNRVRFGTVKGVVDKYLDKCGRQWVAMD 1449
Query: 1232 KLFS 1235
LF+
Sbjct: 1450 TLFA 1453
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 102/174 (58%), Gaps = 11/174 (6%)
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TK 440
FF + +I G++ LFGKV K+ S+ SC V + NI RK+Y LPR + ++ +
Sbjct: 346 FFWTDYTEI---NGSLCLFGKVLNKKTKSYVSCFVKIDNILRKLYFLPRQQRVRDGDSIE 402
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
E V +A VY E D+I T+ K+ +K + +KYAF LP VP ++Y+++ Y P + +
Sbjct: 403 ETVEMASVYEEIDEIMTKLKVDMYKIKACTRKYAFELPNVPKEAQYMKLFYPYTRPQIDA 462
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEV 552
+G+T+SHVFG ++ E +L + I GP WL+ +A+ F + S CK EV
Sbjct: 463 -AAGETYSHVFGANTALFEQFVLWKNIMGPCWLKIQDAD-FGAIHNASHCKLEV 514
>gi|2826900|dbj|BAA24573.1| DNA polymerase alpha catalytic subunit [Oryza sativa]
Length = 1243
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 300/746 (40%), Positives = 418/746 (56%), Gaps = 101/746 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-----QYGKNKKEGEETGEA 615
++TN+ GN+ +TL G R++R E+LLLHAFH + +++PDK ++ K++ EA
Sbjct: 522 QLTNISGNLWGKTLQGSRAQRVEYLLLHAFHARKFIVPDKFARSKEFNSTKRKMNPDTEA 581
Query: 616 -----------------NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQE 658
++GK +K +Y+GGLVLEPKKG YDK+++L+DFNSLYPSIIQE
Sbjct: 582 ARPDEADPSIDDEGHHVDQGKTKKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQE 641
Query: 659 YNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSS 718
YNICFTT+ D LP + TG+LP +K LVE RR VK+ +K S
Sbjct: 642 YNICFTTV------DRSADGNVPNLPASKT-TGVLPELLKSLVERRRMVKSWLKTA--SG 692
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLN 777
Q+DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL NT LV+ NLN
Sbjct: 693 LKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLN 752
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLKKKKY
Sbjct: 753 LEVIYGDTDSIMIHTGLDDISRAKGIAGKVIQEVNKKYRCLEIDLDGIYKRMLLLKKKKY 812
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
AA+ ++ +G + + E KG+D+VRRDWS L+ E G F ++QIL + S DD ++
Sbjct: 813 AAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKEIGDFCLNQIL-----SGGSCDDVIE 865
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
+IH + +++ + G L ITK LTKAPE+Y D K PHVQVALRL
Sbjct: 866 SIHSSLVQVQEQMRGGQTELEKYIITKSLTKAPEDYPDAKNQPHVQVALRLKQNGYSGCS 925
Query: 958 QGDTISYIICEDGTSEAA------TQRAYNIEE----LKNNSKLKIDVNYYLSQQIHPVV 1007
GDT+ YIIC SE+ +QRA E L L+I +YYL Q+I+PVV
Sbjct: 926 AGDTVPYIICSQQDSESTHSERIDSQRAQREPEGWKNLYTMVCLRILASYYLQQRINPVV 985
Query: 1008 TRLLEPI-EGTDAVRIAECLGLDTSLYRSQIKESIQQ-SEENILGVGEAEEVKYQFCDKF 1065
+R+ + GT+ R+AECLGLD+S ++S++ ES Q + +L V + E+ +Y+ C+
Sbjct: 986 SRVCAAVSRGTEPARLAECLGLDSSKFQSRLTESDNQDTSSMLLSVIDDEDERYRGCEPL 1045
Query: 1066 EFTCMNPSCKQVNTVEAPTRLSTHGVVFVL---------DECIN-------PEC------ 1103
+C PSC T + P S D IN P C
Sbjct: 1046 RLSC--PSCS--TTFDCPPVSSLIIGSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDE 1101
Query: 1104 -KVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTC 1160
+V P L N++ + + +I YY+G L C+D GC T L + + T C
Sbjct: 1102 SRVSPAV----LANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTIC 1157
Query: 1161 HKY-----KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-IKFDSETYMGYCKMKQ 1214
Y L R YTE LY+QLS+F Y+ D T+ L K D + + F+ E + + Q
Sbjct: 1158 PNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKE----FAALSQ 1213
Query: 1215 -------HVERFLESSAYNIVDLKKL 1233
V++ + A+ V LK L
Sbjct: 1214 TINLALMEVQKIRDRCAFGWVQLKDL 1239
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 27/204 (13%)
Query: 384 MFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE------- 435
+ LDA+E+ + GTVYLFGKV V + SCCV+V+N+ R IY +P S
Sbjct: 60 FYILDAYEEPFGANSGTVYLFGKVEVGKR--FHSCCVVVKNMQRCIYAIPSSSIFPRDTI 117
Query: 436 --------------HLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
L+ + + SE + + + +F +++ YAF +P
Sbjct: 118 SRLEKNSTTSDSSPSLRASLHELASGLKSEIADKLSDFNVSNFAMTPVKRNYAFERTDLP 177
Query: 482 DLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
+ +Y L++ Y K ALP+DL G F + GT +S LE LL++RKIKGPSWL +
Sbjct: 178 NGEQYVLKINYPYKDSALPTDLRGQHFHALLGTNNSALELLLIKRKIKGPSWLSISKFLA 237
Query: 541 FPS--RISWCKYEVQCNQMEKIRI 562
P+ R+SWCK+EV + + I +
Sbjct: 238 CPATQRVSWCKFEVTVDSPKDISV 261
>gi|409040591|gb|EKM50078.1| hypothetical protein PHACADRAFT_213841 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1452
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 282/703 (40%), Positives = 399/703 (56%), Gaps = 59/703 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE------ 614
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDKQ+GK K E E
Sbjct: 777 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKQWGK-KAEAVAKAENGDGEG 835
Query: 615 -ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-PVRMLQ 672
K K+ Y GGLV EPK+G +DKFI++MDFNSLYPSIIQEYNI FTT+ PV +
Sbjct: 836 EGGKKGKSKRDKYKGGLVFEPKRGLWDKFILVMDFNSLYPSIIQEYNIDFTTVEPV---E 892
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
D D +P + G+LP I LV RRQVK+LMK + L+Q+DI+Q ALK
Sbjct: 893 DEDGEDKIPEVPNQGTEQGVLPRLIATLVNRRRQVKSLMKDRKATQAQLLQWDIKQMALK 952
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
LTANSMYGCLGF SRF+A+PLAAL T KGREIL +T+ L E+L +V+YGDTDS+ ++
Sbjct: 953 LTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFVNS 1012
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
NV + KI + K N YK LE+D+DGV++ +LLL+KKKYAA+ K+ +G
Sbjct: 1013 NVTELAEALKISAEFKKAVNDRYKLLEIDLDGVFQRLLLLQKKKYAAV---KVEDGTR-T 1068
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
S E+KG+D+ RR++ L+ ++V+ QIL + + + ++N+HE++ + D+
Sbjct: 1069 SVEVKGLDMKRREYCALSKNVSQYVLEQILSGE-----ATETVVENVHEYLSTMSGDVRA 1123
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDG 970
G V L I K+L K PE+Y D K+ PHVQVALR+ S + GD I YI C E G
Sbjct: 1124 GKVKLDEFIIFKRLGKNPEDYPDAKSQPHVQVALRMKAKGSAA-RSGDVIPYIFCLGEGG 1182
Query: 971 TSEAATQ--RAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
S + Q RA + +E+K S L+ID YYLSQQI P + RL EPIEGTD R+AECLG
Sbjct: 1183 ESSKSAQAERAKHPDEIKRAGSDLRIDYEYYLSQQILPPIERLCEPIEGTDRARLAECLG 1242
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAP---- 1083
LD S YR+ + L ++ +++ + C +CK T +P
Sbjct: 1243 LDPSRYRNATGTESEGRHFGSLDSLMSDAERFKDSEPLLMRCR--ACK-AETAFSPIDDR 1299
Query: 1084 --TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ L+ GV C P C+ + +L + ++ +YYEGW C+D C
Sbjct: 1300 SASMLTPAGV-----RC--PACEAAIGAASVQV--QLEVQIRAHVARYYEGWTICKDQTC 1350
Query: 1142 SDLTRRCPLGLKTRLCT--TCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS----- 1194
TR +G+ R C C K + Y++ Q+Y QL ++ ++ D+ KAL +
Sbjct: 1351 GGRTRM--MGVYGRRCLRPAC-KGIVAFEYSDAQMYNQLRYYAHVFDVEKALKGAVSRRA 1407
Query: 1195 --DTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ I+ + ++ V+++L VDL LFS
Sbjct: 1408 VEELEGIRVTQAELLD--AVQGTVDKYLAQCGRRWVDLGALFS 1448
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 352 TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKEN 411
T+ T P S + A+ E R F+LD E G +Y GK K+
Sbjct: 312 TKDDTLGPAAGSSAKANGSKDASVLEEDGSLRFFWLDYLE----YEGKLYFIGKTQDKKT 367
Query: 412 NSHSSCCVIVQNIDRKIYLLPR----------SEHLKTKEPVSIAQVYSEFDQIATQYKI 461
SCCV V+N++R +++LPR E +T ++ VY +FD++ + I
Sbjct: 368 RLWLSCCVTVENLERNLFILPRERRVEEDPETGELYETDVTPTLQDVYGDFDRVRKKAGI 427
Query: 462 LDFKSRKIEKKYAFNLPGVPDL-SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLEN 520
FK++ ++++YAF VP +++L+V Y P + +++S FS VFGT +S E
Sbjct: 428 NGFKAKFVKRRYAFGEKDVPRTETQWLKVVYGFDQPQISANISSPNFSRVFGTTTSAFEL 487
Query: 521 LLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
L+L+RKI GP WL+ + +SWCK E
Sbjct: 488 LVLKRKIMGPCWLQIKKPVMEHKGVSWCKVEA 519
>gi|380710181|gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
Length = 1561
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 292/733 (39%), Positives = 422/733 (57%), Gaps = 75/733 (10%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKK----------E 608
++TN+ GN+ +TL G R++R E+LLLHAFH K +++PDK + + K E
Sbjct: 842 QLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKFIVPDKFSSHAREAKITKRKLNQGDE 901
Query: 609 GEETG--------------EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPS 654
G+ET + N GK +K +YSGGLVLEPK+G YDK+I+L+DFNSLYPS
Sbjct: 902 GKETEPIDADDPNIEGGILDINHGKAKKGPSYSGGLVLEPKRGLYDKYILLLDFNSLYPS 961
Query: 655 IIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP 714
IIQEYNICFTT+ +S + +LP + TG+LP +K LVE RR VK+ +K
Sbjct: 962 IIQEYNICFTTV------ESSLDGSVPHLPSSK-RTGLLPELLKNLVERRRMVKSWLKTA 1014
Query: 715 NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE 774
S Q+DI+Q+ALKLTANSMYGCLGF NSRF+A+ LA L+T++GREIL +T LV+
Sbjct: 1015 --SGLKAQQFDIQQQALKLTANSMYGCLGFSNSRFYAKSLAELITSQGREILQSTVDLVQ 1072
Query: 775 N-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
N LN EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLK
Sbjct: 1073 NLLNLEVIYGDTDSIMIYSGLDDIGKSKAIAAKVIQEVNKKYRCLEIDLDGLYKRMLLLK 1132
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KKKYAA+ + +GK E KG+D+VRRDWS L+ E G F +SQIL + S +
Sbjct: 1133 KKKYAAVK-VQFKDGKPYEVIEKKGLDMVRRDWSLLSKELGDFCLSQIL-----SGGSCE 1186
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN- 952
D +++IH + K++ + G + L ITK LTK PE Y D K+ PHV+VALRL +
Sbjct: 1187 DVIESIHNALMKVQEQMRTGQIELEKYVITKSLTKPPEAYPDAKSQPHVEVALRLKKSGY 1246
Query: 953 SKKLKQGDTISYII-CEDG----TSEAATQRAYNIEELK-NNSKLKIDVNYYLSQQIHPV 1006
GDT+ Y+I CE G TS QRA + +ELK +N +D++YYL+QQIHPV
Sbjct: 1247 VTGCSAGDTVPYVICCEQGNGSTTSVGIAQRARHPDELKRDNGNWIVDIDYYLAQQIHPV 1306
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFE 1066
++RL I+GT R+A+CLGLD+S ++++ E++ N L +E +++ C+
Sbjct: 1307 ISRLCASIQGTSPARLADCLGLDSSKFQNKSSEAVNDDPSNALLCVADDEERFRGCEPLT 1366
Query: 1067 FTCMNPSCK----------QVNTVEAPTRLST-HGVVFVLDECINPECKVPPYTYLPH-- 1113
TC + SC + + P L V + P+C +
Sbjct: 1367 LTCPSCSCSFECAPIFSSICSSIRQNPADLQVGESASKVWERFSCPKCPEESEGNISSAL 1426
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-----KLH 1166
+ N++ + + +I YY+G + C+D C+ TR L + + T C Y L
Sbjct: 1427 IANQVKRQVEGFISTYYKGVMMCDDETCNYTTRSLNLRVIGDSERGTVCPNYPRCNGHLL 1486
Query: 1167 RVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCK-----MKQHVERFLE 1221
R YTE LY+QL++F ++ D + + K ++ +++ E + + VE+F +
Sbjct: 1487 RQYTEADLYKQLAYFCFVLDTVRCIEKVES-NMRLQVEKELVRIRPVVEAAASTVEKFRD 1545
Query: 1222 SSAYNIVDLKKLF 1234
AY+ V LK L
Sbjct: 1546 RCAYSWVQLKDLI 1558
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 126/255 (49%), Gaps = 34/255 (13%)
Query: 345 AEWEAIQTEPS----TSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIY-KQPGT 399
AEW+A++ S +E + ++ D + F F LDA E++Y G
Sbjct: 337 AEWQALRNAGSGILNCNESEAKLVNTEEKTDFELDSDGSLPF--FILDAHEELYGTNAGN 394
Query: 400 VYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPVSIAQV----- 448
+YLFGKV K ++ SCC++V+N+ R +Y +P K V +Q+
Sbjct: 395 IYLFGKV--KAGGTYHSCCIVVKNMQRCVYAVPNGSVFCGDTISKLSRDVEESQISPSAF 452
Query: 449 YSEFDQIAT-----------QYKILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCP 496
S+ ++A+ ++ I F +++ YAF VP + L++ Y K P
Sbjct: 453 LSQLHEMASGLKAECRNYLLEHNISSFSMAPVKRNYAFERSDVPRGENFVLKINYPFKDP 512
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK--FPSRISWCKYEVQC 554
LPSDL G+ FS + GT SS +E L++RKIKGPSWL + P R+SWCK+EV
Sbjct: 513 PLPSDLRGENFSALLGTHSSAMELFLIKRKIKGPSWLSISKFSSCPIPQRVSWCKFEVIV 572
Query: 555 NQMEKIRITNVCGNV 569
+ + I+I+ NV
Sbjct: 573 DSPKDIKISTSSKNV 587
>gi|168053915|ref|XP_001779379.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669177|gb|EDQ55769.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1231
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 287/692 (41%), Positives = 406/692 (58%), Gaps = 86/692 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--------QYGKNKK----- 607
++TN+ GN+ SRTL G R++R E+LLLH FH + ++LPDK + GK K
Sbjct: 511 QLTNISGNLWSRTLQGARAQRVEYLLLHEFHIRKFILPDKLSQKEKEKEVGKRKASAQSD 570
Query: 608 -----EGEETGEANKG-------KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
+GE+ + G KG+K AY GGLVLEPKKG YDK+I+L+DFNSLYPSI
Sbjct: 571 RDVPPDGEDGDNRDAGLDNATAKKGKKGPAYLGGLVLEPKKGLYDKYILLLDFNSLYPSI 630
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN 715
IQEYN+CFTT+ + +T +P V G+LP +K LVE R+QVK +K+
Sbjct: 631 IQEYNVCFTTV------ERTVTGSIPSIPLSDV-PGVLPQVLKGLVERRKQVKGWLKK-- 681
Query: 716 LSSDLL--MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV 773
++D+L Q+DI+Q+ALKLTANSMYGCLGF NSRF+A+P+A L+TA+GREIL +T LV
Sbjct: 682 -TTDILKYQQFDIQQQALKLTANSMYGCLGFTNSRFYAKPIAELITAQGREILQSTVDLV 740
Query: 774 E-NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLL 832
+ +LN EVIYGDTDS+MI + D + I ++ E NK Y+ LE+D+DGVYK MLLL
Sbjct: 741 QTSLNLEVIYGDTDSIMIHSGLEDLAAAKSIAMKVIREVNKKYRLLEIDLDGVYKRMLLL 800
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KKKKYAA+ + S+G + E KG+D+VRRDWS L+ E G + + QIL + S
Sbjct: 801 KKKKYAAVKVQSNSDGSVTEVIEQKGLDIVRRDWSSLSKEIGNYCLEQIL-----SGGSR 855
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
++ + IH ++K++ D+ NG + L ITK LTK PE+Y D K PHVQVALR +
Sbjct: 856 EEVVDAIHSQLRKLQEDMRNGQIELDKYVITKSLTKQPEDYPDGKNQPHVQVALR-RKQS 914
Query: 953 SKKLKQGDTISYIIC-----EDGTSEAATQRAYNIEELK-NNSKLKIDVNYYLSQQIHPV 1006
++ DT+ YIIC E S RA + +E+K NS +DV YY+SQQIHPV
Sbjct: 915 GHRISPNDTVPYIICIKKGSERPQSGGIADRARHPDEIKEENSDWLVDVEYYISQQIHPV 974
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCD 1063
V+RL PIEGT+A IA+CLGLD++ K I + ++ V + +V+Y+ C+
Sbjct: 975 VSRLCAPIEGTNAGHIADCLGLDSA------KVHIADLDCDVRVVHLSYFLLDVRYKLCE 1028
Query: 1064 KFEFTCMN-------PSCKQVNTVEAPTRLSTHGVVFVLDECINPEC-------KVPPYT 1109
E C P ++ ++ A + ++ D + +C +V P
Sbjct: 1029 PLELVCAQCYKKYVFPGVTEILSLIATPKGTSSPAAACPDPLMCDQCNQSGGLNRVSPAM 1088
Query: 1110 YLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPL--------GLKTRLCTTCH 1161
L N++ +++I +YYE W+ C+D C +TR L G L C+
Sbjct: 1089 ----LANQVKLRADEFIKRYYECWMMCDDEMCGHITRNITLQRVGDAEKGTVCPLYPRCN 1144
Query: 1162 KYKLHRVYTELQLYQQLSFFHYICDITKALTK 1193
+L R YTE LY QL+ F+ + D+++ L K
Sbjct: 1145 G-RLRRQYTEAHLYNQLTQFYRLLDVSRVLEK 1175
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 109/212 (51%), Gaps = 33/212 (15%)
Query: 368 DSLPLATDHENKKVFRMFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDR 426
+SLPL D E++ F F LDA E+ Y PG +Y+FGKV V + SCCV+V+N+ R
Sbjct: 35 NSLPL--DAESRLPF--FLLDAHEEPYGANPGIIYMFGKVPV--GGKYESCCVVVRNMQR 88
Query: 427 KIYLLPRSEHLKTKEPVSIAQVYS------------EFDQIATQYK-----------ILD 463
+Y++P + + Q+ S + +++T K +
Sbjct: 89 CVYVVPTPSIFPSNSIAELGQLASSDQPAEKIAFKAKLQELSTDLKQEMAEKLMDLDVAQ 148
Query: 464 FKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLL 522
F +++ YAF P VP Y +++ Y K P LPSDL G F V GT +S LE LL
Sbjct: 149 FSMYPVKRSYAFECPEVPTGENYFMKLMYPFKNPPLPSDLKGRNFVKVLGTHTSALELLL 208
Query: 523 LERKIKGPSWLEF--PEAEKFPSRISWCKYEV 552
++++IKGP WL P+ S+ISWCK EV
Sbjct: 209 IKKRIKGPCWLSIAAPQRVASSSQISWCKIEV 240
>gi|406864839|gb|EKD17882.1| DNA polymerase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1450
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 280/718 (38%), Positives = 406/718 (56%), Gaps = 45/718 (6%)
Query: 537 EAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYV 596
EA+ F I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+
Sbjct: 753 EADTF--FIAALALKVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYI 809
Query: 597 LPDKQYGKNKKE-GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
PDK K K + EE + G +KK Y GGLV EP+KG YDKF+++MDFNSLYPSI
Sbjct: 810 CPDKAVFKGKHQIEEENADEESGDVKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSI 869
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQ 713
IQE+NICFTT+ L + + E +PE VD G+LP I LV RR+VK LMK
Sbjct: 870 IQEFNICFTTVDRLNLSNDE-----EQVPEVPVDQDLGVLPKLIATLVSRRREVKKLMKD 924
Query: 714 PNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV 773
+++ L +DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L
Sbjct: 925 KTATTEQLSTWDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKDLA 984
Query: 774 ENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
E+ + +VIYGDTDS+MI+ NV++ ++G + K N+ Y+ LE+DID V++ +LL
Sbjct: 985 ESNSLQVIYGDTDSVMINANVDNVKDALRVGEEFKKAVNERYRLLEIDIDNVFRRILLQA 1044
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KKKYAA+++ ++ +GK + E+KG+D+ RR++ L+ E V +++LDE D ++
Sbjct: 1045 KKKYAAINLVQV-DGKYVDKMEVKGLDMKRREYCNLSKE----VSAKLLDEILSGD-DME 1098
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ IH+++++I T + G VP I +L KAP++Y ++P VQVALR +
Sbjct: 1099 LVVTRIHDYLREISTKMREGAVPTHKYTIYTKLGKAPQDYPQADSMPQVQVALR-ELSRG 1157
Query: 954 KKLKQGDTISYIICEDG--TSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRL 1010
K +++ D I+YI+ DG +SE +R+Y +++ K S L DV +YL +QI P V RL
Sbjct: 1158 KTVRKDDVIAYIVTGDGKNSSEGPAKRSYTPQDVSKAESGLTPDVEWYLYKQIFPPVERL 1217
Query: 1011 LEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCM 1070
I GTD VRIA+CLGLD Y + E I + + + +F D F
Sbjct: 1218 CANIAGTDTVRIADCLGLDVRKYSINNNNANAGGEAEISPLESQIDDEVRFKDAFRLRLQ 1277
Query: 1071 NPSCKQVNTVEAPTRLSTHGVVFVLDEC--INPECKVPPYTYLPHLINKLSQDMNKYIVK 1128
+CK + G+V LD C C+ +I +L + + +
Sbjct: 1278 CRACK--------GKFGFEGLVGSLDSCSAAGITCRCGHTLSNISIIAQLEHQIRQQTSR 1329
Query: 1129 YYEGWLKCEDPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFF 1181
YYEGWL C+D C + TR RC LG K L C K+H YTE +Y QL +F
Sbjct: 1330 YYEGWLVCDDQACGNRTRQMSVYGHRC-LGPKG-LGHGCLG-KMHYEYTEKMIYNQLLYF 1386
Query: 1182 HYICDITKALTKSDTPS----IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ D+ KA T + + + + +K VE++L+ V + LF
Sbjct: 1387 SSLFDVEKAKTAAKGTERELVMALVEHNRVRFGTLKAVVEKYLDKCGRQWVAMDSLFG 1444
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 242/538 (44%), Gaps = 72/538 (13%)
Query: 61 FQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVED 117
F +L+ LK G K Y+ +E++YEEV E Y + V R +DD++ DD G+GY +D
Sbjct: 11 FAELRALKASGKKRLDTYQVQEEEDLYEEVDEDGYKKVVRDRLNQDDFVIDDNGEGYADD 70
Query: 118 GREIFDDDI-------EDVPQK------------KEKHDKRKKNKNIQNPNAKGDIQKLL 158
GRE +D E++P K ++K K K K I N KG +
Sbjct: 71 GREEWDQQPNYGSASEEELPAKGKSGKAAKRQREEDKAKKEKIEKGISNYFTKGPVVAQS 130
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
PVK K +DD LADLL EV+T + P PTA+
Sbjct: 131 KAKPVKTKA-------DDDFLADLLGEVDTNV--------------------PRPTAQSS 163
Query: 219 LANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQ 278
+ + + + + + + P + K +D+ +V + ++ D + + M
Sbjct: 164 RSRRVQDKRKARALSPGVSELPRHTLKKTKVSDNRAPATTHVEQDFGDDGFMDTMDDDMV 223
Query: 279 IDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA-VELSTSPPPQVV 337
+D+ S + ++ V +++E E + +DV + + +A V +S + PP +
Sbjct: 224 MDNPMTSSPVAKAVERKSNVAVKVEDDEEEDT---MDVAQADGIVTARVNISGTRPPTKI 280
Query: 338 EKKEHKCAEWEAIQTE--PSTSEPQVHSRTADD-SLPLATDHENKKVFRMFFLDAFE--- 391
+K E + + T P + + D ++ + E ++ DA E
Sbjct: 281 KKAEPYPSPASSSPTRAPPQRVDASTWNNVTDRLNVVNGSQGETSSFGKLDHTDAIEEDG 340
Query: 392 -------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TK 440
D + G++ LFGKV K + S SC + V NI RK++ LPR + T
Sbjct: 341 SLHMFWTDYTEVNGSLCLFGKVQNKTDRSFVSCFLKVDNILRKLFFLPREYRQRGGRDTT 400
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPAL-P 499
+ V + VY E D++ + ++ K + +KYAF LP +P EYL++ Y P L P
Sbjct: 401 DEVEMKDVYEEVDELMGKMRVGMHKIKPCTRKYAFELPDIPREGEYLKLLYPYSKPQLQP 460
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQ 556
+G TFSHVFGT + E +L + I GP WL+ +AE + S+CK EVQ ++
Sbjct: 461 EHQTGTTFSHVFGTNTPLFEQFVLWKNIMGPCWLKIEDAEFGVLNNASYCKLEVQVSK 518
>gi|440636669|gb|ELR06588.1| DNA polymerase alpha subunit A [Geomyces destructans 20631-21]
Length = 1445
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 275/714 (38%), Positives = 409/714 (57%), Gaps = 52/714 (7%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y++PDK K
Sbjct: 755 IAALALKVQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYIVPDKAPFK 813
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+ + E+ + +G +KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFT
Sbjct: 814 GRPKTEQQDQDEEGDVKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFT 873
Query: 665 TIPVRMLQDSDITTLCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
T+ L D + E +PE VD GILP I LV RRQVK+LMK + +S+ L
Sbjct: 874 TVDRTTLSDDE-----EKVPEVPVDQDQGILPKLIATLVGRRRQVKSLMKDRSATSEQLA 928
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIY 782
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIY
Sbjct: 929 TWDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESKSLQVIY 988
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
GDTDS+MI+ NV++ FK+G++ K N YK LE+DID V++ +LL KKKYAA+++
Sbjct: 989 GDTDSVMINANVDNVTDAFKVGHEFKRAVNDRYKLLEIDIDHVFRRILLQAKKKYAAINL 1048
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
++ +GK I E+KG+D+ RR++ L+ E ++++IL + + + IH++
Sbjct: 1049 LEV-DGKFIEKMEVKGLDMKRREYCALSKEVSSKLLNEILSGE-----ETEIVITRIHDY 1102
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTI 962
+++I + +PL I +L K P++Y + ++P VQVALR K +++ D I
Sbjct: 1103 LREISGKMREDLIPLQKYTIYTKLGKNPKDYPNADSMPQVQVALR-ELARGKTVRKDDVI 1161
Query: 963 SYIICEDGTS--EAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+YI+ DG S E A +R+Y + +K +S+LK D +YL +QI P V RL I GTD+
Sbjct: 1162 AYIVTGDGKSANELAAKRSYTPADVMKADSELKADAEWYLYKQIFPPVERLCANILGTDS 1221
Query: 1020 VRIAECLGLDTSLY--RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQV 1077
+R+A+CLGLD Y + + +E + L +EV+++ + + +C CK
Sbjct: 1222 MRLADCLGLDVRKYSINNNVSSGGTATEIHPLESQIEDEVRFKDAARLQLSCR--VCKGT 1279
Query: 1078 NTVEAPTRLSTHGVVFVLDECINPE---CKVPPYTYLPHLINKLSQDMNKYIVKYYEGWL 1134
E G++ LD C +P C+ ++ +L + + +YYEGWL
Sbjct: 1280 FGFE--------GLLGSLDSC-SPNGIMCRCGATLRNLAVVAQLEHKIRQETARYYEGWL 1330
Query: 1135 KCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYIC 1185
C+D C TR RC P GL + C Y+ Y+E +Y QL +F +
Sbjct: 1331 VCDDQACGARTRQMSVYGHRCLGPRGL-GQGCLGRMGYE----YSEKAMYNQLLYFSSLF 1385
Query: 1186 DITKALTKSDTPS----IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
D+ KA K + + + +K VER+L+ V + LF
Sbjct: 1386 DVEKAREKCGGTDRDLVLALGEHNRVRFDTLKGVVERYLDKCGRQWVAMDSLFG 1439
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 254/542 (46%), Gaps = 73/542 (13%)
Query: 52 IDKTNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDD 108
+ K+ + + +L+ L+ G K YE +E++YEEV E Y + + R +DD++ D
Sbjct: 1 MSKSARSSKLAELRALRESGKKRLDTYEVHQEEDLYEEVDEDGYKKVIRDRLNQDDFVID 60
Query: 109 DGGDGYVEDGRE------IFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANM- 161
D G+GY +DGRE +D + E+ + K K+ K K K ++ + ++ K + N
Sbjct: 61 DNGEGYADDGREDWDRRQGYDSESEEEARPKGKNGKAAKRKREEDKTKRENMDKGINNYF 120
Query: 162 ---PV--KKKKKEEVQLNNDDVLADLLSEVNTTIAPTL------KLNTKTNEIVIPKEEP 210
PV + K K +DD L DLL+EV+T + P +L +T + P
Sbjct: 121 TKGPVVAQPKAKPVKTQADDDFLGDLLAEVDTNVLPRASHHPPKQLTRRTRAL-----SP 175
Query: 211 PAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVD 270
P +AK A K +K+ + P+ + D+ + + ++ +++ + PV
Sbjct: 176 PIQSAKSLSA---KRMKLGGANDAPLAHD----DDDGSFIGGMDDDDVPMSDPAPSSPVQ 228
Query: 271 DGLWEQMQI-------DDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVS 323
+ + Q+ DD+D + Q + I + S V+++ V
Sbjct: 229 KAVERKAQVAIKAEEEDDYDAMEVAQ------------ADGIAAAS----VNMSGSRPVP 272
Query: 324 SAVELSTSPPPQVVEK-----KEHKCAEWEAIQTEPS--TSEPQVHSRTADDSLPLATDH 376
++ P PQ +E + W + + + +S P +RT +
Sbjct: 273 KLLKPDPYPTPQSSSPTRPPLEEVDVSAWNNVTSRLNVISSSPPTDTRTYG-KMDYKDAI 331
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
+ MF+ D + +++ G++ LFGKV K+ + SC + V NI RK++ LPR
Sbjct: 332 DGDGSLNMFWTD-YTEVH---GSLCLFGKVKNKKTGEYVSCFLKVDNILRKVFFLPRDNL 387
Query: 437 LK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYS 492
K T E V + VY E D I T+ K+ K + +KYAF L VP+ EYL++ Y
Sbjct: 388 YKHGRETSEEVGMEDVYKEVDSIMTRMKVGMHKIKPCSRKYAFELEDVPNEGEYLKLLYP 447
Query: 493 AKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYE 551
PALP DL+GDTFSH FGT +S E +L + + GP WL+ +A+ F + S CK E
Sbjct: 448 YNKPALPIDLTGDTFSHTFGTNTSIFEQFVLWKNVMGPCWLKIEDADFTFLNNASHCKLE 507
Query: 552 VQ 553
VQ
Sbjct: 508 VQ 509
>gi|443900254|dbj|GAC77580.1| GPI-anchor transamidase [Pseudozyma antarctica T-34]
Length = 1658
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 288/780 (36%), Positives = 410/780 (52%), Gaps = 126/780 (16%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK- 619
++TN+ GN ++TL GGR+ERNE++LLH FH + YV PDK KK+ ++ E
Sbjct: 894 QLTNLAGNSWNKTLNGGRAERNEYILLHDFHRQKYVCPDKISAWEKKQIQQAAELKAKAK 953
Query: 620 --------------GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT 665
KK + GGLV EPK+G +DK+I++MDFNSLYPSIIQE+NI FTT
Sbjct: 954 AKNGATGAGAAAAASSKKDKFKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEFNIDFTT 1013
Query: 666 I---PVRMLQDSDITTLCEY---------------------LPEHQVDTGILPSEIKKLV 701
+ P + L+D D +P V+ G+LP I +LV
Sbjct: 1014 VERPPTQGLEDDDAVNPATVAAEDDAEAAAEGVVDGDKIPDVPSSDVEQGVLPRIIAQLV 1073
Query: 702 ESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAK 761
RRQVK+LMK + + LMQ++I+Q ALKLTANSMYGCLGF NSRF+A+PLAAL T K
Sbjct: 1074 ARRRQVKSLMKDKSATPSQLMQWNIKQLALKLTANSMYGCLGFENSRFYARPLAALTTFK 1133
Query: 762 GREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELD 821
GREIL TK L E++ +V+YGDTDS+MI+ N +Y +IG + K N+ Y+ LE+D
Sbjct: 1134 GREILTATKDLAESMLLDVVYGDTDSVMINTNATEYREAIRIGLEFKKSVNERYRLLEID 1193
Query: 822 IDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQI 881
IDGV++ MLLL+KKKYAA+ + + +GK + EIKG+D+ RR++S L+ +V+ QI
Sbjct: 1194 IDGVFERMLLLQKKKYAAVMVDE--DGKR--TTEIKGLDMKRREYSALSKNVSNYVLEQI 1249
Query: 882 LDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPH 941
L Q + +++IHE++ + + G V L I K+L K PE+Y D K+ PH
Sbjct: 1250 LSGQ-----PTEVVVEHIHEYLGDMADKIKRGEVALEDFIIYKRLGKNPEDYPDVKSQPH 1304
Query: 942 VQVALRLNNTNSKKLKQGDTISYIIC--EDGTS---EAATQRAYNIEELKN-NSKLKIDV 995
VQVALR+ + GD I YI C EDG S A RA++ +EL+ +S+LK+D
Sbjct: 1305 VQVALRV-KARGGSARMGDVIPYIFCLGEDGASSTKSAQADRAHHPDELRRKDSELKVDY 1363
Query: 996 NYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAE 1055
+YL+ QI P + RL E IEGTD R+AECLGLD + Y S + S + G+G+ E
Sbjct: 1364 EHYLALQILPPIERLCESIEGTDRSRLAECLGLDPTKY-SHVSASAGGA-----GMGDRE 1417
Query: 1056 ----------EVKYQFCDKFEFTCMNPSCKQVNTVEAPT-RLSTHGVVFVLDECIN--PE 1102
EV++ C+ E TC PSC++ + P R S+ VL + N PE
Sbjct: 1418 FATLDSQIPDEVRFARCEPLELTC--PSCRETSRFLGPAHRASSSTASSVLRDSTNAKPE 1475
Query: 1103 CKVPPYTYLPHLINKLSQDM--------------NKYIVKYYEGWLKCEDPGCSDLTRRC 1148
+ T N Q M KY+ +YY GW +C D C TR
Sbjct: 1476 ERNAISTKGIRCTNAACQRMLPLATVSIQLELAIRKYVERYYAGWTECSDANCHSRTRMA 1535
Query: 1149 PLGLKTRLCTTCH--------------------KYKLHRVYTELQLYQQLSFFHYICDIT 1188
+ + C H + ++ Y + QLY QL +F + D
Sbjct: 1536 --SVYAKRCIAVHDSKSAALLEATSTVGGQLACRGRVEPCYRDKQLYDQLIYFESLVDAA 1593
Query: 1189 KALTK------SDTPSIKFDSETYMGYCKMKQH--------VERFLESSAYNIVDLKKLF 1234
+ + S TP+IK + + + + ++++L + V L LF
Sbjct: 1594 RIRERVVGKGTSQTPNIKAWHDEVLATLDINKRELDMLHETIDKYLAKNGRRFVKLASLF 1653
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 13/211 (6%)
Query: 352 TEPSTSEPQVHSRTA-DDSLPLATD---HENKKVFRMFFLDAFEDIYKQPGTVYLFGKVF 407
T P+ + P +TA ++ P A E+ K ++LD E + G VYL GKV
Sbjct: 430 TTPTPAGPAGAVKTAVGNATPSAGKVKAFEDDKSLFFYWLDYLEG---ENGVVYLVGKVK 486
Query: 408 VKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILD 463
KE + SCC+ V I+R I+LLPRS+ L+ T V ++Y EF++++ ++ I
Sbjct: 487 DKETGRYVSCCLTVNGIERCIFLLPRSKQLENGHETDRAVGEDEIYDEFEELSAKHGIKR 546
Query: 464 FKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLL 523
F S+ + +KYAF GVP S Y+++RY P LP D G TFS GT +S E L++
Sbjct: 547 FLSKWVTRKYAFEQAGVPAESNYMKIRYGFDEPQLPFDFKGRTFSKTLGTNTSPFELLVV 606
Query: 524 ERKIKGPSWLEFPEAE--KFPSRISWCKYEV 552
+R+I GPSWL+ A + + ISWCK EV
Sbjct: 607 KRRIFGPSWLKISNASIAEGSTPISWCKMEV 637
>gi|170592803|ref|XP_001901154.1| DNA polymerase alpha catalytic subunit [Brugia malayi]
gi|158591221|gb|EDP29834.1| DNA polymerase alpha catalytic subunit, putative [Brugia malayi]
Length = 1292
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 275/645 (42%), Positives = 391/645 (60%), Gaps = 67/645 (10%)
Query: 455 IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTK 514
+ATQ+ IL S +IEK + + L ++ R +A +L+ F + ++
Sbjct: 629 LATQFTIL---SSRIEKLGIAHWSRLSRLKRSVKARQAAHMKTSQWELTAGRF--ILDSR 683
Query: 515 SS-----FLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEK-IRITNVCGN 568
+S F+ N ++ +WL V+ N + I+IT + G
Sbjct: 684 NSTQLIRFINNAWMD------AWLSLAII-------------VELNALPLFIQITKIVGG 724
Query: 569 VLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-----------GEANK 617
VLSRT++GGR+ERNE+LLLHAF++ YV P+K +KK + G+ NK
Sbjct: 725 VLSRTVLGGRAERNEYLLLHAFNKAGYVAPNKYQSDSKKRKQSQLRDTRSADNHPGDYNK 784
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
+K Y+GGLVL+PK G YD FI+L+DFNSLYPSIIQEYNICFTT+ + ++
Sbjct: 785 ILQNRKGQYAGGLVLDPKMGLYDTFILLLDFNSLYPSIIQEYNICFTTVDMSKKDKNE-- 842
Query: 678 TLCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+PE D GILP EI+ LVE RR VK +MK L+ QYDIRQ LKLTA
Sbjct: 843 -----MPELPTDANEGILPREIRSLVERRRDVKRMMKSEKLTEQQRQQYDIRQMGLKLTA 897
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV- 794
NSMYGCLGF SRF+A+PLAAL+TA+GREIL++TK LVE Y VIYGDTDS+MI+
Sbjct: 898 NSMYGCLGFQQSRFYAKPLAALITAQGREILMHTKDLVEKSGYSVIYGDTDSVMINTGFS 957
Query: 795 --NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
++ V K+GN IK N+ YK+LE+DIDG++ +LLLKKKKYA L++ L++ + I
Sbjct: 958 ERSELQHVKKLGNDIKKIINQSYKKLEIDIDGIFIKLLLLKKKKYAGLAVD-LNDERKI- 1015
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
+EIKG+D+VRRD+S + E G ++ IL QS + D+ ++ IH ++K++ ++
Sbjct: 1016 KREIKGLDIVRRDYSFIVKEIGNEILDIILSVQS---QNRDEIIEQIHSRLQKLKEEISQ 1072
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTS 972
+ +++ +I KQLT+ P+EYT+ PH VA RLN T K +GDT+ YIICEDG+
Sbjct: 1073 ELLEISMFQIFKQLTRNPDEYTNINIQPHAVVAQRLNATGKFKFHRGDTVGYIICEDGSG 1132
Query: 973 EAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
++ATQRAY++ E++ N+ L+ID +YYL QQI PVV+RL PIE + +A+ LGLD+ +
Sbjct: 1133 QSATQRAYHLTEVQENN-LRIDFHYYLVQQIIPVVSRLCVPIEECNEAWVAQALGLDSMI 1191
Query: 1033 YRSQIKESIQQSEENILGVGEAEEVKY---QFCDKFEFTCMNPSC 1074
Y K ++ EEN+ + Y Q C+ F+F C N C
Sbjct: 1192 YE---KHAVH--EENVDREEQLXCFSYHSLQRCESFKFVCPNDGC 1231
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 159/532 (29%), Positives = 253/532 (47%), Gaps = 66/532 (12%)
Query: 53 DKTNKFAAFQKLKDLKGQGVKHKYEFT-ADENVYEEVSEKEYTERVLKRQEDDWIDDDGG 111
++ +K A +++K + G H+ + VYEEV E EY V +RQ+DD++ DD G
Sbjct: 33 EQESKSRALEEMKRARDAGTVHRVNVANLVKPVYEEVDEDEYVRIVQERQKDDFVVDDDG 92
Query: 112 DGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEE- 170
GYV+ G + FD++ +K K +R+ +K KG I + +KK K+E
Sbjct: 93 SGYVDHGFDFFDEEQCTATRKAMKAKERRGDK----VKRKG-IGNFFHALNIKKMKEENT 147
Query: 171 VQLNNDDVLADLLSEVNTTIAPTLKLN-----TKTNEIVIPKEEPPAPTAKEYLANFSKP 225
V + +D + LL+E +++ N +KT+ + + + +
Sbjct: 148 VTVTDDPDVEALLNECDSSNFLKKSANEKVDGSKTDNVSLIRNHCFDSKITANSIKTHQM 207
Query: 226 IKVEKKIEK---PIKKEPSPLKDEIKSND----SVMEVEMNVAEQSKEEPVDDGLWEQMQ 278
IK+ ++ E PSP+ + KS + S EV +++S +E V D
Sbjct: 208 IKLNERREHLNVTASHSPSPISNVGKSTNLESISEKEVRKVFSKESSKEQVKDHF----- 262
Query: 279 IDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVE 338
++A +S E VTN S V+ P +
Sbjct: 263 -----------------------LDAQKSDIFVEVHSVTNKHSDKCVVKEVVQPETSFI- 298
Query: 339 KKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPG 398
W A + + +P S A + T+ E + V R ++LDAFED K PG
Sbjct: 299 --------W-ADRNQMLNEQPMKESVVATFGSFMRTNLEGELVLRFYWLDAFEDPIKMPG 349
Query: 399 TVYLFGKVFVKENNSHS-SCCVIVQNIDRKIYLLPRSEHLKTK---EPVSIAQVYSEFDQ 454
TVYLFG++ N S S SCCV+V+NI R+++ LPR +HL + + V + QV E +
Sbjct: 350 TVYLFGRLI---NGSISESCCVVVKNIWRQVFFLPREKHLVNEVQTDEVDLMQVNEEVQK 406
Query: 455 IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTK 514
I + K R EKK+A+N VP ++ LEV+YS P LP DLSG+TFSHVF T
Sbjct: 407 ILRSMGVKVVKCRPCEKKFAYNDGIVPQNAQVLEVQYSFNDPRLPMDLSGETFSHVFNTT 466
Query: 515 SSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYE--VQCNQMEKIRITN 564
++ +E LL+E +KGPSW+E ++++ K+E V +M+ I I++
Sbjct: 467 ANAMERLLVETGMKGPSWIEISGCNVSSLQVTYVKHEFTVDMERMKSISISD 518
>gi|300681492|emb|CBH32588.1| DNA polymerase alpha catalytic subunit,putative,expressed [Triticum
aestivum]
Length = 1369
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 286/670 (42%), Positives = 393/670 (58%), Gaps = 59/670 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK-------QYGKNKKEGEETG 613
++TN+ GN+ +TL G R++R E+LLLH+F K +++PDK + K K + G
Sbjct: 678 QLTNISGNLWGKTLQGARAQRVEYLLLHSFPSKKFIVPDKFAACKELNFAKRKLNADTGG 737
Query: 614 -------------EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYN 660
+ GK RK +Y+GGLVLEPKKG YDK+I+L+DFNSLYPSIIQE+N
Sbjct: 738 GNAVDPSIDDEVHHGDPGKVRKVPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEFN 797
Query: 661 ICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL 720
ICFTT V D ++ LP + TG+LP +K LVE RR VK+ +K S
Sbjct: 798 ICFTT--VERSSDGNLPN----LPTSKA-TGVLPELLKSLVERRRMVKSWLK--TASGLK 848
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLNYE 779
Q+DI+Q+ALKLTANSMYGCLGF +SRFFA+PLA L+T +GREIL NT +LV+ NLN E
Sbjct: 849 RQQFDIQQQALKLTANSMYGCLGFTSSRFFAKPLAELITLQGREILQNTVNLVQNNLNLE 908
Query: 780 VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAA 839
VIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DGVYK MLLLKKKKYAA
Sbjct: 909 VIYGDTDSIMIYTGLDDISKAKSIAGKVIQEVNKKYRCLEIDLDGVYKRMLLLKKKKYAA 968
Query: 840 LSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNI 899
+ ++ +G + + E KG+D+VRRDWS L+ E G F ++QIL + + DD +++I
Sbjct: 969 IKVAL--DGSLRENIERKGLDMVRRDWSLLSKEIGDFCLNQIL-----SGGTCDDVVESI 1021
Query: 900 HEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQG 959
H + +++ + +G + L ITK LTKAPE+Y D K PHVQVALRL G
Sbjct: 1022 HNSLVQVQAQMKSGQIELEKYIITKSLTKAPEDYPDAKNQPHVQVALRLKQNGFSGCSAG 1081
Query: 960 DTISYIICEDGTSE-----AATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
DT+ YIIC S+ QRA + +EL ++ +K ID+ YYLSQQIHPVV+RL
Sbjct: 1082 DTVPYIICSQQDSDKTHSGGIAQRARHPDELTRDPNKWMIDIEYYLSQQIHPVVSRLCAS 1141
Query: 1014 IEGTDAVRIAECLGLDTSLYRSQIKESIQQSEEN-ILGVGEAEEVKYQFCDKFEFTCMNP 1072
IEGT R+AECLGLD+S ++S+ S + + +L V + EE +Y+ C+ +C P
Sbjct: 1142 IEGTSPARLAECLGLDSSKFQSRSTGSSNEDMSSMLLSVTDDEEERYRGCEPMRLSC--P 1199
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
C +T E P S + +E + P + D ++ V
Sbjct: 1200 CC--TSTFECPPVSSLIASLSDANEGKDAIVNFWRRMRCP----RCPDDTDECRVSPAVI 1253
Query: 1133 WLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-----KLHRVYTELQLYQQLSFFHYIC 1185
+C+D GC T L + + T C Y +L R YTE LY+QLS+ Y+
Sbjct: 1254 ANQCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVRQYTEADLYRQLSYLCYVL 1313
Query: 1186 DITKALTKSD 1195
D T+ L K D
Sbjct: 1314 DATRCLDKLD 1323
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 101/194 (52%), Gaps = 27/194 (13%)
Query: 384 MFFLDAFEDIYK-QPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP---------- 432
+ LDA+E+ + GTVYLFGKV V+ HS CCV+V+N+ R IY +P
Sbjct: 254 FYLLDAYEEPFGINSGTVYLFGKV-VRGKRFHS-CCVVVKNMQRCIYAIPSSSVFPRDTI 311
Query: 433 -RSEHLKTKEPVS----------IAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
R E T S + + SE + + +F +++ YAF VP
Sbjct: 312 SRIERNSTSSDASPSLRATLHELSSGLKSEIADKLSDLNVSNFVMTPVKRNYAFERTDVP 371
Query: 482 DLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
+Y L+V Y K PA+P+DL G F + GT +S LE L++RKIKGPSWL +
Sbjct: 372 IGEQYVLKVNYPYKDPAVPADLRGKYFHALLGTNNSALELFLIKRKIKGPSWLSISKFVA 431
Query: 541 FPS--RISWCKYEV 552
PS R+SWCK+EV
Sbjct: 432 CPSTERVSWCKFEV 445
>gi|297797665|ref|XP_002866717.1| hypothetical protein ARALYDRAFT_332862 [Arabidopsis lyrata subsp.
lyrata]
gi|297312552|gb|EFH42976.1| hypothetical protein ARALYDRAFT_332862 [Arabidopsis lyrata subsp.
lyrata]
Length = 1492
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 292/702 (41%), Positives = 402/702 (57%), Gaps = 88/702 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK---------------QYGK 604
+++TN+ GN+ +TL G RS+R E+ LLH FH K Y+LPDK YG
Sbjct: 810 LQLTNISGNLWGKTLQGARSQRIEYYLLHTFHSKKYILPDKISQRMKEIKSSKRRMNYGP 869
Query: 605 NKKEGEET-------GEANKG-KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSII 656
+ EE + +KG K +K AY+GGLVLEPK+G YDK+++L+DFNSLYPSII
Sbjct: 870 EDRNVEELDADLALENDPSKGSKTKKGPAYAGGLVLEPKRGLYDKYVLLLDFNSLYPSII 929
Query: 657 QEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
QEYNICFTT+P +D LP Q G+LP ++ LV R+ VK MK+
Sbjct: 930 QEYNICFTTMPRS--EDG-----VPRLPSSQT-PGVLPKLMEHLVSIRKSVKLKMKKE-- 979
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN- 775
+ + DIRQ ALKLTANSMYGCLGFPNSRF+A+PLA L+T +GREIL T LV+N
Sbjct: 980 TGLKYWELDIRQHALKLTANSMYGCLGFPNSRFYAKPLAELITLQGREILQRTVDLVQNH 1039
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
LN EVIYGDTDS+MI ++D + V I +++ E NK Y+ L++D DG+YK MLLL+KK
Sbjct: 1040 LNLEVIYGDTDSIMIHSGLDDIEEVNAIKSKVIQEVNKKYRCLKIDCDGIYKRMLLLRKK 1099
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYAA+ + + +GK E KGVD+VRRDWS L+ E G +S+IL S +D
Sbjct: 1100 KYAAVKL-EFKDGKPCEDIERKGVDMVRRDWSLLSKEIGDLCLSKIL-----YGGSCEDV 1153
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
++ +H + KI+ ++ NG V L ITK LTK P Y D K+ PHVQVALR+ K+
Sbjct: 1154 VEAVHNELMKIKEEMRNGQVALEKYVITKTLTKPPAAYPDSKSQPHVQVALRMRQRGYKE 1213
Query: 956 -LKQGDTISYIIC-EDGT-----SEAATQRAYNIEELKNN-SKLKIDVNYYLSQQIHPVV 1007
DT+ YIIC E G S +RA + +E+K++ S+ +D++YYL+QQIHPVV
Sbjct: 1214 GFNAKDTVPYIICYEQGNASSASSAGIAERARHPDEVKSDGSRWLVDIDYYLAQQIHPVV 1273
Query: 1008 TRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEF 1067
+RL I+GT R+AECLGLD S YRS+ ++ L ++E +
Sbjct: 1274 SRLCAEIQGTSPERLAECLGLDPSKYRSKSNDAASSDPSTSLLFAASDEER--------- 1324
Query: 1068 TCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYT--YLPHLI-NKLSQDMNK 1124
P+ + ++ L H C P+C+ T P +I N++ + ++
Sbjct: 1325 ----PATPETEESDSTFWLKLH--------C--PKCQQEDSTGRISPAMIANQVKRQVDG 1370
Query: 1125 YIVKYYEGWLKCEDPGCSDLTRRCP----LGLKTRLCTTCHKY-----KLHRVYTELQLY 1175
++ YY+G + C+D C T R P LG + R T C Y L R YTE LY
Sbjct: 1371 FVSMYYKGIMVCDDESCKHTT-RSPNFRLLGERER-GTVCPNYPNCNGTLLRKYTEADLY 1428
Query: 1176 QQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQHVE 1217
+QLS+F +I D +L K D +K E M K++ VE
Sbjct: 1429 KQLSYFCHILDTQHSLEKMDV-GMKIQVEKAM--TKIRPAVE 1467
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 137/590 (23%), Positives = 253/590 (42%), Gaps = 104/590 (17%)
Query: 37 VGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHK----YEFTADENVYEEVSEKE 92
G + GR + + + T++ ++LK ++ G++ Y+ + +++ V + E
Sbjct: 2 TGDNSTDIGRRRSRGAEATSRKDTLERLKAIRQGGIRSASGGGYDIRLQKPIFDTVDDDE 61
Query: 93 YTERVLKRQED--DWI--DDDGGD-GYVEDGREIFDDDIEDVPQKKEKHDKRKK------ 141
Y V +R+E+ ++ D +GGD GY+++G E D P+ ++ D +
Sbjct: 62 YDALVSRRREEARGFVVEDGEGGDLGYLDEGEE-EDWSKPSGPESTDESDDGGRFSGRLK 120
Query: 142 -----NKNIQNPNAK---------------GDIQKLLANMPVKK-KKKEEVQLNNDDVLA 180
+ +Q P K G + + + KK K+ ++ Q
Sbjct: 121 KKKKGKEQMQQPQVKKVNPALKAAATITGEGRLSSMFTSSSFKKVKETDKAQYEG----- 175
Query: 181 DLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEP 240
+L EV + P K P P + + L + + +++++ EP
Sbjct: 176 -ILDEVIAQVTPDESDRKKHTRRKQPGTVPVTISRNKKLVSVTSSMEMKES-------EP 227
Query: 241 SPLKDEIKSNDSV-MEVEMNVAEQSKEEPVDDGL-WEQMQIDDWDNSQQTQDVLPEQAKV 298
+PL I +D V ME E+ E KE V E M++ D+ + ++ + +A+V
Sbjct: 228 TPL---IYEDDCVFMENELMKEEDMKESEVTPSHNVESMEVPGSDSVIEDENKI-RKAEV 283
Query: 299 ELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSE 358
+ ++ E ++ +D+ +S SA A W+ + T
Sbjct: 284 KTELGVKEVFTLNATIDMKEKDSALSAT------------------AGWKEAMGKGGTEN 325
Query: 359 PQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQP-GTVYLFGKVFVKENNSHSSC 417
+ + + D + R + LDA+E+ + GT+YLFGKV K +++ SC
Sbjct: 326 GALLGPSCEGKTEFDLDADGS--LRFYILDAYEEAFGASMGTIYLFGKV--KMGDTYKSC 381
Query: 418 CVIVQNIDRKIYLLPRSEHLKTKEPVSIAQ----------------------VYSEFDQI 455
CV+V+NI R +Y +P + E + + Q + +E Q
Sbjct: 382 CVVVKNIQRCVYAIPNDSIFPSHELIMLEQEVKDSQLSPESFRGKLHEMASKLKNEIAQE 441
Query: 456 ATQYKILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTK 514
Q + +F +++ YAF P VP +Y +++ Y K LP DL G++F + G+
Sbjct: 442 LLQLNVSNFSMAPVKRNYAFERPDVPTGEQYVMKINYPFKDRPLPEDLKGESFCALLGSH 501
Query: 515 SSFLENLLLERKIKGPSWLE-FPEAEKFPS-RISWCKYEVQCNQMEKIRI 562
+S LE+ +L+RKI GPSWL+ F + PS +SWCK+EV + I +
Sbjct: 502 TSALEHFILKRKIMGPSWLKIFNFSTCSPSVGVSWCKFEVTVESPKDITV 551
>gi|302904102|ref|XP_003049003.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729937|gb|EEU43290.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1473
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 290/737 (39%), Positives = 410/737 (55%), Gaps = 75/737 (10%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-YG 603
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ +
Sbjct: 758 IAALAISVQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQTFR 816
Query: 604 KNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
++ EE + G +KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICF
Sbjct: 817 GRQRAEEEQQQEEAGDTKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICF 876
Query: 664 TTIP----------------VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQV 707
TT+ + +Q D + + +P +Q D GILP I LV RRQV
Sbjct: 877 TTVDRTASVSRHWFFFRIMFLTPMQTEDEDAVPD-VPTNQ-DQGILPRLIATLVSRRRQV 934
Query: 708 KALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILL 767
K+LMK + + L +DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL
Sbjct: 935 KSLMKDKKATPEELATWDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTFKGREILR 994
Query: 768 NTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYK 827
+TK L E+ + +VIYGDTDS+MI+ NV++ FK+GN K N YK LE+DID V++
Sbjct: 995 STKELAESKSLQVIYGDTDSVMINANVDNVADAFKVGNDFKKAVNDQYKLLEIDIDNVFR 1054
Query: 828 YMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY 887
+LL KKKYAA+++ + +GK I E+KG+D+ RR++ L+ E K ++ +IL
Sbjct: 1055 RILLQAKKKYAAINLVE-KDGKFIEKMEVKGLDMKRREYCALSKEISKHLLDEIL----- 1108
Query: 888 TDYSLDD---RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQV 944
S DD + IHE+++ I + +P+ I QL KAP+EY + ++P VQV
Sbjct: 1109 ---SGDDTEVSIARIHEYLRDIAGKMREQTIPVPKYIIYTQLGKAPKEYPNADSMPQVQV 1165
Query: 945 ALRLNNTNSKKLKQGDTISYIICEDG-TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQI 1003
ALR K +++GD ISYII DG +SE A +RAY +LK + L DV +Y+ +QI
Sbjct: 1166 ALR-ELAKGKTVRKGDVISYIITGDGKSSEPAPKRAYAPGDLKADPTLLPDVEWYIGKQI 1224
Query: 1004 HPVVTRLLEPIEGTDAVRIAECLGLDTSLYRS---QIKESIQQSEENILGVGEAEEVKYQ 1060
P V RL I GT ++AE LGLD Y S Q S E + L +EV++
Sbjct: 1225 FPPVERLCANIVGTSTSQLAEQLGLDIKRYSSFQTQQNSSSNDLEIHPLDSQIPDEVRFG 1284
Query: 1061 FCDKFEFTCMNPSCKQVNTVE----APTRLSTHGVVFVLDECINPECKVPPYTYLPHLIN 1116
C + C CK +T E +P R++ GVV C + + + ++
Sbjct: 1285 DCARLSLRCRK--CKASSTFEGLAASPDRVTASGVV-----CGSCGATISTLS----IVA 1333
Query: 1117 KLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHR 1167
+L + +YYEGWL C+D C + TR RC P GL R C +Y+
Sbjct: 1334 QLEHAIRTQTSRYYEGWLVCDDTQCGNRTRQMSVYGTRCLGPKGL-ARDCLGRMRYE--- 1389
Query: 1168 VYTELQLYQQLSFFHYICDITKALTKSDTPSI-KFDSETYMG--------YCKMKQHVER 1218
YTE +Y QL +F + D+ KA K+ + + D E + + +K V++
Sbjct: 1390 -YTEKAIYTQLLYFASVWDVDKAKAKAQVAEMSRQDRENILAQAEHNRVRFGTVKGVVDK 1448
Query: 1219 FLESSAYNIVDLKKLFS 1235
+LE V + LFS
Sbjct: 1449 YLEKCGRQWVAMDTLFS 1465
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 266/593 (44%), Gaps = 100/593 (16%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +LK L+ G K Y+ +N+Y+EV E Y + V R EDD++ DD G+GY
Sbjct: 5 ARLAELKALRQSGKKAFDNYKVKDVDNLYDEVDEAGYKKIVRDRLNEDDFVVDDNGEGYA 64
Query: 116 EDGRE------IFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-----GDIQKLLANMPVK 164
+DGRE +D D E+ + + K K KN Q AK DI + +
Sbjct: 65 DDGREEWDRVQAYDSDSEEEAVVRGRPSKAAK-KNRQQEQAKRDANDKDISEYFTKGAGR 123
Query: 165 KKKKEEV--QLNNDDVLADLLSEVNTTI-APTLKLNT--KTNEIVIPKEEPPAPTAKEYL 219
+ K +V +DD L DLL EV+ I AP ++++ ++ + PAP
Sbjct: 124 AQPKPKVVKTKADDDFLTDLLGEVDNNIPAPAVRISAIERSGGRRKARALSPAP------ 177
Query: 220 ANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQI 279
+PI +KK + PSPL +D + P D L +++
Sbjct: 178 ----EPIPKKKKTLD--TRLPSPLPPAADDDDGFIP------------PAADDL-SDLEV 218
Query: 280 DDWDNSQQTQDVLPE----QAKVELQIEAIESQSIEEKVDVTNVESVSS-AVELSTSPPP 334
D S+ P Q K +++ E + + E+ ++V + ++++ +V L++S P
Sbjct: 219 ADIPMSEGPAPSSPAAKVAQRKAQVKQEPKDDED-EDMMEVAHAGTIAATSVNLTSSRPI 277
Query: 335 QVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPL-----------ATDHENKKVFR 383
+ + K E A T P++S P + A DS ++ E K + +
Sbjct: 278 KKIIKAE-------AYPT-PASSSPVKANGAAVDSTSWNALTERLNVVSSSPSETKGIGK 329
Query: 384 MFFLDAFE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
+ DA E D + G++ LFGKV K+ S+ SC V V NI RK+Y LPR
Sbjct: 330 IDHKDAVEEDGSLNFFWTDYMEINGSLCLFGKVLNKKTRSYVSCFVKVDNILRKLYFLPR 389
Query: 434 SEHLKTKEPVS----IAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ E + VY E D+I T+ K+ +K + +KYAF LPGVP ++Y+++
Sbjct: 390 QHRVQGGEETGEEVEMTNVYDEVDEIMTRMKVGMYKIKACTRKYAFELPGVPKEAQYMKL 449
Query: 490 RYSAKCPALPSDLS-GDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RIS 546
Y P P D + G+T+SHVFG+ ++ E +L + I GP WL+ + + F S S
Sbjct: 450 LYPYNKP--PVDPTPGETYSHVFGSNTALFEQFVLWKNIMGPCWLKIEDGD-FGSIKNGS 506
Query: 547 WCKYEVQCNQMEKIRITNVCGN----------VLSRTLMGGRSERNEFLLLHA 589
CK EV I + + N V RT + + E L + A
Sbjct: 507 HCKLEVLAEHPNMISVLSDSDNLDVPPLTLMSVSLRTAFNSKDNKQEILAISA 559
>gi|340522222|gb|EGR52455.1| polymerase [Trichoderma reesei QM6a]
Length = 1474
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 291/725 (40%), Positives = 418/725 (57%), Gaps = 65/725 (8%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ K
Sbjct: 762 IAALAVSVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQTFK 820
Query: 605 NKKEGEE-TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
+++ EE G+ G G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICF
Sbjct: 821 GRQKAEEENGDEEAGDGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICF 880
Query: 664 TTIPVRMLQDSDITTLCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
TT+ D++ + +PE V+ GILP I LV RRQVK LMK + + L
Sbjct: 881 TTVDRTASADNE-----DAVPEVPVNQEQGILPRLIATLVSRRRQVKNLMKDKKATPEEL 935
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVI 781
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VI
Sbjct: 936 ATWDIKQLALKLTANSMYGCLGYTRSRFYARPLAILTTHKGREILRSTKDLAESKSLQVI 995
Query: 782 YGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
YGDTDS+MI+ NV++ FK+GN+ K N+ Y+ LE+DID V++ +LL KKKYAA++
Sbjct: 996 YGDTDSVMINANVDNVADAFKVGNEFKKAVNEQYRLLEIDIDNVFRRILLQAKKKYAAIN 1055
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQN 898
+ + +GK I E+KG+D+ RR++ L+ E K ++ +IL S DD +
Sbjct: 1056 LVE-KDGKFIEKMEVKGLDMRRREYCALSKEVSKHLLDEIL--------SGDDIEVAVAR 1106
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
IHE+++ I T + +P+ I QL K P+EY + ++P VQVALR + K +++
Sbjct: 1107 IHEYLRDIATKMREFSIPVAKYTIYTQLGKGPKEYPNADSMPQVQVALR-DMLRGKTVRK 1165
Query: 959 GDTISYIICEDG-TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
GD ISY+I +SE A +RAY+ +LK + L+ DV++Y+++QI P V RL I GT
Sbjct: 1166 GDVISYVITGTSKSSEPAPKRAYSPADLKADPSLQPDVDWYIAKQIFPPVERLCANIAGT 1225
Query: 1018 DAVRIAECLGLDTSLY---RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSC 1074
++AE LGLD Y ++Q S Q E + L +EV++ C + + C C
Sbjct: 1226 STSQLAEQLGLDVRRYTSTQTQSGSSSDQLEIHPLESQIPDEVRFVDCKRLKLRCRK--C 1283
Query: 1075 KQVNTVE----APTRLSTHGVVFVLDECINPECKVPPYTYLPHL--INKLSQDMNKYIVK 1128
K + E +P R++ GV I P C LP L + ++ + +
Sbjct: 1284 KASSDFEGLTGSPDRVTASGV-------ICPGCS----AVLPTLSVVAQVEHAVRLQTSR 1332
Query: 1129 YYEGWLKCEDPGCSDLTRR------CPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFH 1182
YYEGWL C+DP C + TR+ C LG K L C K+ YTE +Y QL +F
Sbjct: 1333 YYEGWLVCDDPQCGNRTRQMSVYGTCCLGPKG-LARDCGG-KMQYEYTEKAMYNQLVYFA 1390
Query: 1183 YICDITKALTKSDTPS-----------IKFDSE-TYMGYCKMKQHVERFLESSAYNIVDL 1230
+ D+ KA K+ S I+ +E + + +K V+++LE V +
Sbjct: 1391 SLWDVDKAKAKAGDASNTDLSAQEREKIRALAEHNRVRFTTVKTVVDKYLEKCGRQWVAM 1450
Query: 1231 KKLFS 1235
LFS
Sbjct: 1451 DSLFS 1455
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 255/540 (47%), Gaps = 64/540 (11%)
Query: 51 KIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDD 109
K+D+ K A + L+ G+ Y+ N+Y+EV E Y E V R +DD++ DD
Sbjct: 3 KVDRRAKLAELKALRQ-AGKKAFESYQVEDVANLYDEVDEAGYKEIVRDRLNQDDFVVDD 61
Query: 110 GGDGYVEDGREIFD--------DDIEDVPQKKEKHDKRKKNKNIQNPNAKGD---IQKLL 158
G+GY +DGRE +D + +++P + KK+++ + + I +
Sbjct: 62 NGEGYADDGREDWDRVRPYESDSEGDELPTRGRPSKAAKKSRDEEQAKRDANDRSISEYF 121
Query: 159 ANMPVKKKKKEEV--QLNNDDVLADLLSEVNTTIAPTLKLNTKT----NEIVIPKEEPPA 212
K + K +V +DD LADLL EV+ I K E ++ PA
Sbjct: 122 TKGAGKAQPKPKVVKTKADDDFLADLLGEVDANIPAPAPRAPKAERSGGERRKARDLSPA 181
Query: 213 PTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDG 272
P +F K +V+ ++ P +P+P + +D + + +DD
Sbjct: 182 PEP-----SFKKQKRVDIRLPSP---DPAPPSFDDNDDDGLAPL------------IDD- 220
Query: 273 LWEQMQIDDW---DNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA-VEL 328
E M D+ D + + Q K +++ E +S ++ ++V + +V A V L
Sbjct: 221 --EPMGTADFPMSDPAPSSPAAKVAQRKAQIKQEP-QSDDDDDMMEVAHAGAVKVASVNL 277
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLD 388
+ S P + + K+E + S + T ++ ++ E K + ++ D
Sbjct: 278 AASRPVRKIIKEEPAATSSPVKAPDTSVDASSWNQLTEKLNVVSSSMSEPKGIGKIDHRD 337
Query: 389 AFE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK 438
A E D + G++ LFGKV K+ S+ SC V + NI RK+Y LPR + L+
Sbjct: 338 AIEADGSLNFFWTDYTEVNGSLCLFGKVLNKKTQSYVSCFVKIDNILRKLYFLPRQQRLR 397
Query: 439 ----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAK 494
T + V ++ VY+E D++ T+ + +K +K ++KYAF+LP +P ++Y+++ Y
Sbjct: 398 DGEETGDEVDMSDVYNEVDELMTKMNVGMYKIKKCQRKYAFDLPDIPKEADYMKLLYPYT 457
Query: 495 CPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEV 552
PAL D G+TFSHVFGT ++ E +L + I GP WL+ +A+ F + S CK EV
Sbjct: 458 KPALNMDTKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIQDAD-FGAIKNASHCKLEV 516
>gi|402223440|gb|EJU03504.1| DNA polymerase alpha catalytic subunit [Dacryopinax sp. DJM-731 SS1]
Length = 1365
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 285/701 (40%), Positives = 397/701 (56%), Gaps = 54/701 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN ++TL GGR+ERNE++LLH FH Y++PDK +GK E + +G
Sbjct: 689 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYIVPDKMWGKKTANAAAKAETEELEG 748
Query: 621 RKKAAYSGG------LVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
AA LV EPK+G +DK+I++MDFNSLYPSIIQEYNI FTTI Q
Sbjct: 749 GVPAAGKKKDKYKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTTIE----QPE 804
Query: 675 DITTLCEYLPEH---QVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+ E +P+ + G+LP I LV RRQVK LMK + S L QYDIRQKAL
Sbjct: 805 QVEGEEEKIPDTPATDIAQGVLPRLIATLVNRRRQVKNLMKDKSASKAKLQQYDIRQKAL 864
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLGF SRF+A+PLAAL T KGREIL +T+ L E+L +V+YGDTDS+ ++
Sbjct: 865 KLTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFVN 924
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
NV+D + KI N K N+ YK LE+D+DGV++ +LLL+KKKYAAL + + +G
Sbjct: 925 SNVSDLEEAKKIANDFKKHVNERYKLLEIDLDGVFQRLLLLQKKKYAALKVEE--DG--T 980
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
S E+KG+D+ RR++ L+ + V+ IL + + + ++ IHE++ KI D+
Sbjct: 981 TSTEVKGLDMKRREYCALSKTVSQAVLEFILSGE-----ATEIVVERIHEYLTKIGEDVK 1035
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--ED 969
G + + I K+L K PE+Y D K+ PHVQVALR+ + GD I YI C +D
Sbjct: 1036 AGKIDMDEFIIFKRLGKNPEDYPDAKSQPHVQVALRM-KARGNSARGGDVIPYIFCLGDD 1094
Query: 970 GTSEAATQ--RAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
G + Q A++ +EL+ NS L ID +YLSQQI P + RL EPIEGTD R+AECL
Sbjct: 1095 GQTSRTAQADHAHHPDELRKVNSGLHIDYLHYLSQQILPPIERLCEPIEGTDRARLAECL 1154
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL 1086
GLD S Y S + Q++E + G ++ Q DK F ++ + EA
Sbjct: 1155 GLDPSRYSSSLS---NQTDEPLFGTLDS-----QIPDKERFKDVDALLIRCRKCEASFMF 1206
Query: 1087 STHG----VVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
+ + +D P C P + L +L + + +I KYY+GW+ C+DP C
Sbjct: 1207 GSMAEKNDCILHVDGPKCPACSAPIQS--ASLQVQLDRAIRDHISKYYDGWMICDDPTCG 1264
Query: 1143 DLTRRCPLGLKTRLCT--TCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIK 1200
+ TR +G+ R C C + + YT+L LY Q+ F+ + D KA K S +
Sbjct: 1265 NRTRS--MGVYGRRCMRPGC-RGNMAFEYTDLMLYHQILFYSSLLDGKKAEAKCKNTS-R 1320
Query: 1201 FD------SETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
D + + +M V + LE VDL LFS
Sbjct: 1321 LDEVKALLTSNHQLLDEMVGIVHKHLEKCGRQWVDLGNLFS 1361
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 205/466 (43%), Gaps = 61/466 (13%)
Query: 103 DDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQ-KLLANM 161
DDW D GDG+ ED E + + + + + K+KK K P D + A
Sbjct: 2 DDWERD--GDGHEEDSEEDYGEFRQSCAFRHKDKAKKKKEKKEMRPRPDVDATPDISAYR 59
Query: 162 PVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKE---Y 218
PV +KE D +A L+ + TT A + + + P TA +
Sbjct: 60 PVINAEKES------DFMASLMKSMETTPASASRGRPQKRKSAA-HAAPTNFTAHRRPPH 112
Query: 219 LANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQ 278
L NF P K + + + K +D M P DD ++
Sbjct: 113 LENFGSPAKKARLQQAAVTS---------KLHDLTM-------------PDDDSFYDNFY 150
Query: 279 IDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVE 338
DD +L ++A ++ E + +S+ K+ + S S L +
Sbjct: 151 QDD---------MLVDEAPAIVKQEH-KGKSVSPKLPIAEAASESRISPLKPADNLPRPL 200
Query: 339 KKEHKCAEWEAIQTE---PSTSEPQVHSRTADDSL-PLATDHENKKVFRMFFLDAFEDIY 394
KKE W ++Q + S S+ + S S + E+ R F+LD E+
Sbjct: 201 KKEPAFPSWLSVQDKLNVKSESDDTIGSTAMSGSAGSKVSALEDDGSLRFFWLDYLEN-- 258
Query: 395 KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL-------KTKEPVSIAQ 447
G VY GKV K SCCV ++NI+R I++L R + +T E + A+
Sbjct: 259 --DGKVYFVGKVVDKVTGKWVSCCVAIENIERNIFVLKRHRKMGMRKDGAETDEIPTNAE 316
Query: 448 VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSDLSGDT 506
V+ +FD + + I ++++ ++++YAF VP + +E+++V Y P LP+D+SG +
Sbjct: 317 VFQDFDHVRRKAGIQKWRAKFVKRRYAFGETDVPTEETEWMKVVYGFGEPQLPNDISGPS 376
Query: 507 FSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
FS VFGT +S E L+L+RKI GP WL+ E + ISWCK EV
Sbjct: 377 FSRVFGTSTSAFELLVLKRKIMGPCWLQIKEPTVSDTGISWCKLEV 422
>gi|343425417|emb|CBQ68952.1| related to POL1-DNA-directed DNA polymerase alpha, 180 KD subunit
[Sporisorium reilianum SRZ2]
Length = 1671
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 278/736 (37%), Positives = 396/736 (53%), Gaps = 132/736 (17%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK- 619
++TN+ GN ++TL GGR+ERNE++LLH FH + Y+ PDK KK+ ++ E K K
Sbjct: 900 QLTNLAGNSWNKTLNGGRAERNEYILLHDFHRQKYICPDKISAWEKKQIQQAAEL-KAKA 958
Query: 620 -------------------GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYN 660
KK + GGLV EPK+G +DK+I++MDFNSLYPSIIQE+N
Sbjct: 959 RAKSGAGGAGGAAASGTAVSSKKDKFKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEFN 1018
Query: 661 ICFTTI---PVRMLQD--------------------------SDITTLCEYLPEHQVDTG 691
I FTT+ P + L+D +D+ + + +P V+ G
Sbjct: 1019 IDFTTVERPPTQGLEDAEVAAPAAAATAASTSGEGETAVDAVADVDKIPD-IPSSDVEQG 1077
Query: 692 ILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFA 751
+LP I +LV RRQVK+LMK + LMQ++I+Q ALKLTANSMYGCLGF NSRF+A
Sbjct: 1078 VLPRIIAQLVARRRQVKSLMKDKTATPSQLMQWNIKQLALKLTANSMYGCLGFENSRFYA 1137
Query: 752 QPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC 811
+PLAAL T KGREIL TK L E++ +VIYGDTDS+MI+ N +Y +IG + K
Sbjct: 1138 RPLAALTTFKGREILTATKDLAESMLLDVIYGDTDSVMINTNATEYREALRIGQEFKKSV 1197
Query: 812 NKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLAS 871
N+ Y+ LE+DIDGV++ MLLL+KKKYAA+ + + +GK S EIKG+D+ RR++S L+
Sbjct: 1198 NERYRLLEIDIDGVFERMLLLQKKKYAAVLVDE--DGKR--STEIKGLDMKRREYSALSK 1253
Query: 872 EAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPE 931
+V+ QIL Q + + +++IHE++ + + G V L I K+L K PE
Sbjct: 1254 NVSNYVLDQILSGQ-----ATELVVEHIHEYLSDMSGKIKTGQVALDDFIIFKRLGKNPE 1308
Query: 932 EYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDGTSEAAT---QRAYNIEELK 986
+Y D K+ PHVQVALR+ + GD I YI C EDGTS T +RA++ +EL+
Sbjct: 1309 DYPDVKSQPHVQVALRM-KARGGSARMGDVIPYIFCLGEDGTSSTKTAQAERAHHPDELR 1367
Query: 987 N-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR------SQIKE 1039
+S+LKID +YL+ QI P V RL E IEGTD R+AECLGLD + Y +
Sbjct: 1368 RKDSELKIDYEHYLALQILPPVERLCESIEGTDRSRLAECLGLDPAKYSHASTSGAGAGG 1427
Query: 1040 SIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTR-------------- 1085
+ E L +EV++ C+ + TC P+C++ + P
Sbjct: 1428 AGADREFATLDSQIPDEVRFAQCEPLKLTC--PTCREHSAFLGPAHRPRIAAIKQPLADS 1485
Query: 1086 ----------LSTHGVVFVLDECINPECK--VPPYTYLPHLINKLSQDMNKYIVKYYEGW 1133
+ST G+ C NP C+ +P L + +L + Y+ +YY GW
Sbjct: 1486 TNTPPEERNAISTKGI-----RCTNPACQRMLP----LATVAIQLELAVRTYVERYYAGW 1536
Query: 1134 LKCEDPGCSDLTRRCPLGLKTRLCTTCH--------------------KYKLHRVYTELQ 1173
+C DP C TR + K C H + ++ Y + Q
Sbjct: 1537 TECSDPNCGSRTRMASVYAKR--CLAVHDAKSAALLDATAQVGSHLACRGRVEPSYRDKQ 1594
Query: 1174 LYQQLSFFHYICDITK 1189
LY QL + + D+ +
Sbjct: 1595 LYDQLIYLESLFDVGR 1610
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 16/221 (7%)
Query: 353 EPSTSEPQVHSRTADDSLPLATDH-------ENKKVFRMFFLDAFEDIYKQPGTVYLFGK 405
EP+T P + + + AT E+ K ++LD E + G VYL GK
Sbjct: 434 EPATPTPAAANGSVKTAAGTATPSAGKIKAFEDDKSLFFYWLDYLEG---ENGVVYLVGK 490
Query: 406 VFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKI 461
V K++ + SCC+ V I+R I+LLPRS+ L+ T V ++Y EF+++ ++ I
Sbjct: 491 VKDKDSGRYVSCCLTVNGIERCIFLLPRSKQLEDGHETDRAVGEDEIYDEFEELTAKHGI 550
Query: 462 LDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENL 521
F S+ + +KYAF GVP S Y+++RY P LP D G TFS FGT +S E L
Sbjct: 551 KRFLSKWVTRKYAFEHAGVPAESSYMKIRYGFDEPQLPFDFKGRTFSKAFGTNTSPFELL 610
Query: 522 LLERKIKGPSWLEFPEAE--KFPSRISWCKYEVQCNQMEKI 560
+++R+I GPSWL+ A + + ISWCK EV + + I
Sbjct: 611 VVKRRIFGPSWLKISNASLAEGSTPISWCKMEVTIDDPKDI 651
>gi|392589707|gb|EIW79037.1| hypothetical protein CONPUDRAFT_126817 [Coniophora puteana RWD-64-598
SS2]
Length = 1433
Score = 448 bits (1152), Expect = e-122, Method: Compositional matrix adjust.
Identities = 276/713 (38%), Positives = 390/713 (54%), Gaps = 72/713 (10%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK YGK K E EA++ G
Sbjct: 751 QLTNLAGNAWNKTLNGGRAERNEYILLHEFHRLKYICPDKTYGKKVKPEPEPDEADEEGG 810
Query: 621 RK-------------KAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ Y GGLV EPK+G +DKFI++MDFNSLYPSIIQEYNI FTT+
Sbjct: 811 NAAGGGGGGKASKAKRDKYKGGLVFEPKRGLWDKFILVMDFNSLYPSIIQEYNIDFTTVE 870
Query: 668 VRMLQDSDITTLCEYLPE---HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
R + D D + +PE V G+LP I LV RRQVK+LMK + + L+QY
Sbjct: 871 -RQVDDPD-----DKIPEPPSSDVAQGVLPRLIATLVSRRRQVKSLMKDKSATPAKLLQY 924
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGD 784
DI+Q+ALKLTANSMYGCLGF SRF+A+PLAAL T KGREIL +T+ L E+L +V+YGD
Sbjct: 925 DIKQQALKLTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAESLQLDVVYGD 984
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+ ++ NV + KI N+ K N Y+ LE+D+DGV+ +LLL+KKKYAA+ +
Sbjct: 985 TDSVFVNSNVTELSEALKISNEFKKAVNDRYRLLEIDLDGVFARLLLLQKKKYAAIKVED 1044
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
S S EIKG+D+ RR++ L+ ++V+ QIL + + + ++ IHE++
Sbjct: 1045 GSR----TSTEIKGLDMKRREYCALSKNVSQYVLDQILSGE-----ATEIVVEQIHEYLT 1095
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
+ ++ +G + + I K+L K PE+Y D K+LPHV VALRL + GD I Y
Sbjct: 1096 SVSENVRSGKIKVDDFIIFKRLGKNPEDYPDAKSLPHVHVALRL-KAKGGSARAGDVIPY 1154
Query: 965 IIC----EDGTSEAATQRAYNIEELK--NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
I C ED + A +RA + +EL+ + +L+ID ++YL+ QI P + RL EPIEGTD
Sbjct: 1155 IFCVAPGEDSSKTAQAERAKHPDELRRADTKELQIDYDHYLANQILPPIERLCEPIEGTD 1214
Query: 1019 AVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEA----EEVKYQFCDKFEFTCMNPSC 1074
R+AECLGLD S +RS GEA + Q D F NP
Sbjct: 1215 RARLAECLGLDPSRFRSS-------------SAGEATTSFATLDSQITDAERFRDANPFL 1261
Query: 1075 KQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLP----HLINKLSQDMNKYIVKYY 1130
+ + S ++ D C+ P P P L +L + I +YY
Sbjct: 1262 VRCRGCQGQLAFSP---LWEDDACVRPTGVACPACSAPLSTVSLQTQLEVQIRACIARYY 1318
Query: 1131 EGWLKCEDPGCSDLTRRCPLGLKTRLCTTCH-KYKLHRVYTELQLYQQLSFFHYICDITK 1189
EGW C+D C + TR + + R C + +H Y++ +LY QL +F + D K
Sbjct: 1319 EGWTVCDDTTCGNRTRS--MRVYGRRCVQPECRGSVHFEYSDTELYNQLRYFATLFDEGK 1376
Query: 1190 ALTKSDTPSIKFDSETYMGYC-------KMKQHVERFLESSAYNIVDLKKLFS 1235
+ + K + + M V +++E VD+ LF
Sbjct: 1377 IKAAAAGSARKDAIDGLLANPISREFLETMAATVGKYVEQCGRRYVDMAALFG 1429
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 18/186 (9%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----- 438
F+LD E G ++L GKV + + +S C+ ++ + R +Y+LPR ++
Sbjct: 319 FFWLDFLE----LSGKLFLTGKVKDRTTGAWASACLSIEGLQRNLYVLPRQLRVEQVEDE 374
Query: 439 --------TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
T+ P S A VY +FD+I + I FK++ + + YAF+ VP +E+L+V
Sbjct: 375 DGEVSLQETEHPPSRADVYGDFDRIRQRLDIKSFKAKWVRRSYAFDEKDVPKEAEWLKVL 434
Query: 491 YSAKCP-ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
Y + P +P D + +FGT +S E +L+RKI GP WL A ISWCK
Sbjct: 435 YPFEDPHQVPMDAQSPNIARIFGTNTSAFELFVLKRKIMGPCWLNVRNAVVENKGISWCK 494
Query: 550 YEVQCN 555
E +
Sbjct: 495 LEASVS 500
>gi|299745348|ref|XP_001831651.2| DNA polymerase alpha catalytic subunit [Coprinopsis cinerea
okayama7#130]
gi|298406546|gb|EAU90184.2| DNA polymerase alpha catalytic subunit [Coprinopsis cinerea
okayama7#130]
Length = 1430
Score = 447 bits (1151), Expect = e-122, Method: Compositional matrix adjust.
Identities = 271/695 (38%), Positives = 394/695 (56%), Gaps = 49/695 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN---KKEGEETGEANK 617
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK YGK K+ +E G+A K
Sbjct: 760 QLTNLAGNAWNKTLNGGRAERNEYILLHEFHRLKYICPDKTYGKKTVPKETADEEGDAPK 819
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
K K+ Y GGLV EPK+G +D +I++MDFNSLYPSIIQEYNI FTT+ + ++
Sbjct: 820 SKA-KRDKYKGGLVFEPKRGLWDSYILVMDFNSLYPSIIQEYNIDFTTVDPPEVDENGEE 878
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
+ + P D G+LP I LV RRQVK+LMK + L+QYDI+Q+ALKLTANS
Sbjct: 879 KIPD--PPSDKDKGVLPRLIATLVNRRRQVKSLMKDRTATPAKLLQYDIKQQALKLTANS 936
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
MYGCLGF SRF+A+PLAAL T KGREIL T+ L E+LN +VIYGDTDS+ ++ VND+
Sbjct: 937 MYGCLGFEYSRFYARPLAALTTFKGREILTRTRELAESLNLDVIYGDTDSVFVNSGVNDF 996
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
K K N Y LE+D+D V++ +LLL+KKKYAAL + S S E+K
Sbjct: 997 AEALKTSAIFKKAVNDQYNLLEIDLDCVFQRLLLLQKKKYAALKVEDGSR----TSVEVK 1052
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+D+ RR++ L+ E ++V+++IL + S +D ++ IHE++ + ++ +G V L
Sbjct: 1053 GLDMKRREYCALSKEVSQYVLARIL-----SGDSTEDVVETIHEYLGTMSQNVRSGQVKL 1107
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC----EDGTSE 973
+ K+L K PE+Y D K+ PHVQVALR+ + + GD I YI C E+
Sbjct: 1108 EDFIVFKRLGKNPEDYPDAKSQPHVQVALRM-KAKGQSARSGDVIPYIFCLGEGEESART 1166
Query: 974 AATQRAYNIEELKNNSK-LKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
RA + +E++ + +KID +YL+ Q+ P + RL + IEGTD R+AECLGLD +
Sbjct: 1167 TQADRARHPDEVRRGAGVVKIDYEWYLAHQVLPPIERLCDAIEGTDRARLAECLGLDPNR 1226
Query: 1033 YRSQIKESIQQSEENI---LGVGEAEEVKYQFCDKFEFTCMNPSCKQ----VNTVEAPTR 1085
YR + S+E L ++ +++ D FE C + K ++ P
Sbjct: 1227 YR-----TTTASDEKFFMSLDSQTSDAERFKDADPFEVRCKSCQGKTKFPLLHDRTIPL- 1280
Query: 1086 LSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+ GV + C P V +L +L + +I KYYEGW C++ C + T
Sbjct: 1281 VRASGVTCL--SCDKPIAGV-------NLQLQLEVQIRAHISKYYEGWTVCDEQTCKNRT 1331
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL-----TKSDTPSIK 1200
R + K L C + ++ Y++ +LY QL ++ Y+ D KAL T S+ +
Sbjct: 1332 RAMGVYGKRCLKPGC-RGRVSFEYSDTKLYNQLRYYKYLFDREKALKAARGTGSEEEVLA 1390
Query: 1201 FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ VE++L VDL +FS
Sbjct: 1391 VVGSQATLLNNLSDVVEKYLNQCGRRWVDLNSIFS 1425
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL---- 437
R F++D E G +YL GK+ K++++ SCCV + ++R +Y LPR + +
Sbjct: 317 LRFFWIDYLE----HEGRLYLVGKLKDKKSDTWVSCCVTIDGLERNLYALPREKRIDFDE 372
Query: 438 ------KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVR 490
+T E + V +F+Q+ KI +K+R +++ YAF VP S +L++
Sbjct: 373 DTGEVTETDEIPTDEDVLDDFEQLRQNMKIKSYKTRFVKRNYAFGEKDVPRGESRWLKIV 432
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKY 550
Y P +P + SH+FGT +S E +L+RKI GP WLE +SWC++
Sbjct: 433 YPFTQPQIPMGVWSPNISHIFGTNTSAFEIFVLKRKIMGPCWLEIKNPVVEFKGVSWCRF 492
Query: 551 EV 552
E
Sbjct: 493 EA 494
Score = 44.7 bits (104), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 53 DKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWI--DDD 109
+K +K A +LK + G + E D+ +Y+E+SE EY V R Q DD++ D +
Sbjct: 6 EKVSKLEALAELKRARAGGKRILKE--EDDQIYDEISEDEYRNIVKGRLQRDDFVIEDGE 63
Query: 110 GGDGYVEDGREIF----DDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK 165
G GYV++G + + D ED + K K K+ P K +
Sbjct: 64 GSSGYVDNGEDDWLDTRDASDEDSDRGKRKTSKKNGKAKTMKPKEKAKPAPPPVAPSINA 123
Query: 166 KKKEEVQLNNDDVLADLLSEVNTTIAPTL 194
+ + D +A LL +++ T AP +
Sbjct: 124 YRPQVSVEQEQDFMAGLLGQLDKTPAPRV 152
>gi|346972036|gb|EGY15488.1| DNA polymerase alpha catalytic subunit [Verticillium dahliae VdLs.17]
Length = 1474
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 283/731 (38%), Positives = 414/731 (56%), Gaps = 76/731 (10%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--- 601
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ
Sbjct: 768 IAALALQVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQGFQ 826
Query: 602 YGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
GK KE EE G +KK + GGLV +P+KG YDKF+++MDFNSLYPSIIQE+NI
Sbjct: 827 RGKGAKEDEE------GDSKKKDKFKGGLVFDPEKGLYDKFVLVMDFNSLYPSIIQEFNI 880
Query: 662 CFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
CFTT+ + + + + Q GILP I LV RRQVK+LMK + + L
Sbjct: 881 CFTTVDRTATLEDEEEVPEVPVDQEQ---GILPKLIATLVSRRRQVKSLMKDKTATPEQL 937
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVI 781
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ +VI
Sbjct: 938 ATWDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESRALQVI 997
Query: 782 YGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
YGDTDS+MI+ NV + FK+G + K N+ Y+ LE+DID V++ +LL KKKYAA++
Sbjct: 998 YGDTDSVMINANVENVADAFKVGAEFKKAVNERYRLLEIDIDNVFRRILLQAKKKYAAIN 1057
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ + +NGK I E+KG+D+ RR++ L+ E ++ +IL + T+ S + IH+
Sbjct: 1058 LVE-NNGKYIEKMEVKGLDMKRREYCGLSKEISGKLLDEILSGED-TEVS----ISRIHD 1111
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
++++I + +P I QL K P+EY + +P VQVALR + K +++GD
Sbjct: 1112 YLREIAAKMREQSIPAQKYIIFTQLGKGPKEYPNGDTMPQVQVALR-DIARGKNVRKGDV 1170
Query: 962 ISYIICEDG-TSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
ISYII DG +SE A +RAY + LK S L DV +Y+++QI P V RL I GT
Sbjct: 1171 ISYIITGDGQSSEPAPKRAYTPSDVLKPESGLAPDVEWYIAKQIFPPVERLCANIVGTST 1230
Query: 1020 VRIAECLGLDTSLYRSQIK--ESIQQSEE-NILGVGEAEEVKYQFCDKFEFTCMNPSCKQ 1076
+++AECLGLD Y + + + +++ E + L ++V++ C + C +CK+
Sbjct: 1231 MQLAECLGLDIKRYDTSRRHDDGVEKDMEVHPLESQIPDDVRFADCTRLSLRCR--TCKK 1288
Query: 1077 VNTVEA----PTRLSTHGVVFVLDEC---INPECKVPPYTYLPHLINKLSQDMNKYIVKY 1129
+ E PTR+S GV + D C INP ++ ++ + +Y
Sbjct: 1289 SSVFEGLYSQPTRVSPAGV--LCDHCGATINPLS----------VVAQVEHAIRVQTARY 1336
Query: 1130 YEGWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSF 1180
YEGWL C+D C TR RC P GL R C +Y+ Y+E +Y QL +
Sbjct: 1337 YEGWLVCDDSSCGIRTRQMNVYGTRCLGPKGL-ARDCLGRMRYE----YSEKAIYNQLVY 1391
Query: 1181 FHYICDITK---------------ALTKSDTPSIKFDSE-TYMGYCKMKQHVERFLESSA 1224
F + D+ K AL+++D +I +E + + +K VE++L+
Sbjct: 1392 FTSLWDVDKARDKAVAAAAPGSEEALSQADRENILALAEHNRVRFGTVKGVVEKYLDKCG 1451
Query: 1225 YNIVDLKKLFS 1235
V + LF+
Sbjct: 1452 RQWVAMDTLFA 1462
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 250/546 (45%), Gaps = 71/546 (13%)
Query: 52 IDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKR-QEDDWIDD 108
+ KT++ A +LK L+ G K + D+ +YEEV E +Y + V R EDD++ D
Sbjct: 1 MGKTDRRAKLAELKALRQAGKKAFDNYQVDDINELYEEVDETQYKKIVRDRLNEDDFVVD 60
Query: 109 DGGDGYVEDGREIFD---------DDIEDVPQKKEKHDKRKKNKNIQNPNAK----GDIQ 155
D G+GY +DGRE +D D ED + + K K K + + DI
Sbjct: 61 DNGEGYADDGREEWDRVQQYHYASDSEEDGSGARGRPTKASKKKQADDAARREANDRDIS 120
Query: 156 KLLANMPVKKKKKEEVQLN--NDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+ K + K +V +DD LADLL EV+T + + +TK + +++
Sbjct: 121 TYFTSGAGKTQAKPKVAKTKEDDDFLADLLGEVDTNVPAPVPRSTKRHR-SPDRQQRRVR 179
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
A S+P+ KI+ P D + ++ V ++ DD L
Sbjct: 180 VASPPPHERSQPLAKRSKIQDDRPSSPPAADDMLMDDNFVPTID------------DDEL 227
Query: 274 WEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA-VELSTSP 332
Q + D S V +A+++ + + + +E V + +V++A V ++ S
Sbjct: 228 PTQFPMSDPAPSSPAAKVAERKAQIKKEPDDDDDDMME----VAHAGTVTAASVNIAGSR 283
Query: 333 PPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDS----------LPLATDHENKKVF 382
PP+ + K E A P TS P H D S + ++ E K +
Sbjct: 284 PPKKLIKPEPYPA--------PITSSPVKHESAIDPSAWNDITNNLNIVSSSASEVKSIR 335
Query: 383 RMFFLDAFE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
++ + DA E D + G++ LFGKV K+ H SC V + NI RK++ LP
Sbjct: 336 KIDYKDAIEEDGSLNMFWTDYTEVSGSLCLFGKVLNKKTGQHVSCFVKIDNILRKLFFLP 395
Query: 433 RSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
R ++ T + V + VY+E D + T+ KI K++ ++KYAF LP +P +YL+
Sbjct: 396 RETRVQGGIDTCDEVGMVDVYNEVDALMTKLKIGKHKTKACKRKYAFELPDIPKEGQYLK 455
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RIS 546
Y ++ + +G+TFSHVFGT ++ E +L + I GP WL +A+ F S S
Sbjct: 456 CMYPYSMASVDARETGETFSHVFGTNTALFEQFVLWKNIMGPCWLNIKDAD-FSSLQNAS 514
Query: 547 WCKYEV 552
CK EV
Sbjct: 515 HCKLEV 520
>gi|302784554|ref|XP_002974049.1| hypothetical protein SELMODRAFT_232193 [Selaginella moellendorffii]
gi|300158381|gb|EFJ25004.1| hypothetical protein SELMODRAFT_232193 [Selaginella moellendorffii]
Length = 1419
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 283/679 (41%), Positives = 391/679 (57%), Gaps = 96/679 (14%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK------------- 607
++TN+ GN+ S+TL G R++R E+LLLH F+ + Y++PDK K+
Sbjct: 744 QLTNISGNLWSKTLQGARAQRVEYLLLHEFYGRKYIVPDKVSASEKEKDNEKKRKKAQQD 803
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
E E A + K +K AY+GGLVLEPKKG YDK+I+L+DFNSLYPSIIQEYNICFTT
Sbjct: 804 EDFEPDSAVEAKNKKAPAYTGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTT-- 861
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL--MQYD 725
V D I++L P G+LP +K LV+ R+QVK +K+ ++D+L Q D
Sbjct: 862 VERSSDGSISSL----PNADA-PGVLPQVLKALVDRRKQVKQWLKK---TTDVLKYQQMD 913
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGD 784
I+Q+ALKLTANSMYGCLGFPNSRF+A+ +A L+T++GREIL +T LV+N LN EVIYGD
Sbjct: 914 IQQQALKLTANSMYGCLGFPNSRFYAKFIAELITSQGREILQSTVDLVQNVLNLEVIYGD 973
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+MI+ ++D I Q+ E NK YK LE+D+DGV+K MLLLKKKKYA + +
Sbjct: 974 TDSIMINTGLDDLLKAKSIAAQVIKEVNKKYKLLEIDLDGVFKRMLLLKKKKYACVKVET 1033
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
++GK+ E +G+D+VRRDWS L+ + G F++ QIL E S +D + IH+ ++
Sbjct: 1034 SADGKLREVIEQRGLDIVRRDWSLLSKDVGNFILEQILSEGSR-----EDVVDAIHDKLR 1088
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
K++ D+ NG + L ITK L+K PE+Y D K PHVQVALR K GDTI Y
Sbjct: 1089 KLQDDMRNGRIELEKYVITKSLSKRPEDYPDSKNQPHVQVALRRKQEGHKCFP-GDTIPY 1147
Query: 965 IIC--EDGTSEAATQRAYNIEELK-NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
+IC E +RA + +ELK IDV+YYLSQQIHPVV+RL PIEGTD
Sbjct: 1148 VICCQEGVLGVPLAERARHPDELKAGGGGCIIDVDYYLSQQIHPVVSRLCTPIEGTDPSH 1207
Query: 1022 IAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMN-------PSC 1074
IA+CLGLD S R Y C+ E C + P
Sbjct: 1208 IADCLGLDPSKDR------------------------YNRCEALELLCSSCAARYPFPGV 1243
Query: 1075 KQVNTV----------EAPTRLSTH--GVVFVLDECINPECKVPPYTYLPHLINKLSQDM 1122
V T+ L TH G F+ C + E P P ++++ ++
Sbjct: 1244 SHVLTLVGEDQSEDENAGTQSLLTHQSGTSFIF--CTSDE---PLSIVSPQVLDRAAE-- 1296
Query: 1123 NKYIVKYYEGWLKCEDPGCSDLTRRCPLGL-----KTRLCTT---CHKYKLHRVYTELQL 1174
+I +YY+ W+ C+D C+ +R L + + +C C+ +L R Y+++ L
Sbjct: 1297 --FIQRYYDCWMVCDDEMCNHTSRDTILRIVGDAERGAVCPNFPRCNG-RLVRQYSQVDL 1353
Query: 1175 YQQLSFFHYICDITKALTK 1193
Y QL+ F + D+ + L K
Sbjct: 1354 YNQLTHFFRLLDVNRVLQK 1372
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 134/298 (44%), Gaps = 62/298 (20%)
Query: 308 QSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQT-------------EP 354
Q+ E K D VE E S PPP EK+ AE A+ T EP
Sbjct: 190 QTSEAKEDTAKVE------EDSLPPPPSTSEKQ----AEDSAVSTSLVADAEVKIKVEEP 239
Query: 355 STSEPQV-----HS-------RTADDSLPL----ATDHENKKVFRMFFLDAFEDIY-KQP 397
S P + HS + A+DS L A + FFLDA+E+ +
Sbjct: 240 SRELPPLPFNADHSTSENERIKAAEDSFGLGEMSALPADEMGNLSFFFLDAYEEAFGANS 299
Query: 398 GTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP-----------------RSEHLKTK 440
GTV+LFGKV + + SCCV V+NI R ++ +P S LK K
Sbjct: 300 GTVFLFGKV--QRGGKYVSCCVAVRNIQRCVFAVPGPSVFPDGLVNTLEQEATSSELKLK 357
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALP 499
++ E + + + F +++ YAF+ V + Y L++ Y K P LP
Sbjct: 358 LQEMAREMKMELSEKLMELNVSKFSMIPVKRSYAFDRMDVRSGAHYYLKLSYPFKDPTLP 417
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP--SRISWCKYEVQCN 555
DL G F+ +FGT++S LE L++R+IKGP WL + P S+ISWCK EV +
Sbjct: 418 GDLRGAHFTSLFGTRTSALETFLIKRRIKGPCWLSISNPHQIPCSSQISWCKVEVSVD 475
Score = 40.4 bits (93), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR--QEDDWIDDDGGDGY 114
AA ++LK L+ G + +E +E +++ + EK+Y V KR + D++ DD G GY
Sbjct: 22 AALEQLKRLREGGGRRVDTFELKVEEQIFDRLDEKDYALLVAKRRLESQDFVVDDDGLGY 81
Query: 115 VEDGREIFDDDIEDVPQKKEKHD 137
+ G E + D+ +P+ ++ D
Sbjct: 82 ADIGEE-ENWDVGAMPESSDEED 103
>gi|346319562|gb|EGX89163.1| DNA polymerase alpha catalytic subunit, putative [Cordyceps militaris
CM01]
Length = 1481
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 280/705 (39%), Positives = 405/705 (57%), Gaps = 49/705 (6%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ +
Sbjct: 779 IAALAISVQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQTFR 837
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+++ + E G+G+KK + GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICFT
Sbjct: 838 GRQKASDENEEEAGQGKKKDKFKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICFT 897
Query: 665 TIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
T+ R +D + E +P+ Q D G+LP I LV RRQVK+LMK + +++ L +
Sbjct: 898 TVD-RTSLSTDEDAVPE-VPKDQ-DQGVLPKLISTLVGRRRQVKSLMKDKSATAEQLATW 954
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGD 784
DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYGD
Sbjct: 955 DIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTFKGREILRSTKELAESKSLQVIYGD 1014
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+MI+ NV+ FK+GN+ K N+ Y+ LE+DID V++ +LL KKKYAA+++ +
Sbjct: 1015 TDSVMINANVDCVADAFKVGNEFKKAVNEQYRLLEIDIDNVFRRILLQAKKKYAAINLVE 1074
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+GK I E+KG+D+ RR++ L+ E K ++ +IL + + + IHE+++
Sbjct: 1075 -KDGKFIEQMEVKGLDMRRREYCALSKEISKHLLDEIL-----SGADTEAAVSRIHEYLR 1128
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
+I + +P+ I QL K P+EY + ++P VQVALR + K +++GD ISY
Sbjct: 1129 EIAAKMREQTIPVAKYIIFTQLGKDPKEYPNADSMPQVQVALR-DIARKKNVRKGDVISY 1187
Query: 965 IICEDG-TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIA 1023
+I DG +SE +RA+ +LK ++ L DV +YL +QI P V RL I GT ++A
Sbjct: 1188 VITGDGKSSEPPAKRAHAPGDLKTDTTLIPDVEWYLGKQIFPPVERLCANIVGTSTSQLA 1247
Query: 1024 ECLGLDTSLYRSQIKESIQQSEENILGVGEAE-----EVKYQFCDKFEFTCMNPSCKQVN 1078
E LGLD Y S ++ Q S + L + E EV++ C + C CK
Sbjct: 1248 EQLGLDVRRYNSL--QTQQNSASDDLEIHPLESQIPDEVRFADCARLSLRCRK--CKSST 1303
Query: 1079 TVE----APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWL 1134
E AP R+S GV V C N + + H + S +YYEGWL
Sbjct: 1304 PFEGLAVAPDRVSASGV--VCGACHNVIPNISIVAQVEHAVRVQSS-------RYYEGWL 1354
Query: 1135 KCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYIC 1185
C+D C + TR RC P GL R C +Y+ YTE +Y QL +F +
Sbjct: 1355 VCDDSQCGNRTRQMSVYGTRCLGPKGL-ARDCLGRMRYE----YTEKAIYNQLVYFASLW 1409
Query: 1186 DITKALTKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDL 1230
D+ +A ++ P S+ + +H R + +VDL
Sbjct: 1410 DVERARARASAPDGPMPSQDREKVLALAEH-NRVRFGTVKGVVDL 1453
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 164/629 (26%), Positives = 276/629 (43%), Gaps = 110/629 (17%)
Query: 38 GTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTE 95
G R + K N A +L L+ G K Y+ +Y+EV E Y +
Sbjct: 5 GASHTNATRYNALVMSKVNHRAKLAELTALRKAGKKAFDSYKVEDVNALYDEVDEDGYKK 64
Query: 96 RVLKR-QEDDWIDDDGGDGYVEDGREIFD--------DDIEDVPQKKEKHDKRKKNKNIQ 146
V R EDD++ DD G+GY +DGRE +D D+E+ P + + K N+ Q
Sbjct: 65 IVRDRLNEDDFVVDDNGEGYADDGREDWDRVRQYDSESDLEERPTRGRQSKANKANR--Q 122
Query: 147 NPNAKGD-----IQKLLANMPVKKKKKEEVQLNNDDV--LADLLSEVNTTI---APTLKL 196
AK D I + P K ++K ++ +DDV +A+LL EV++ I AP +
Sbjct: 123 AEQAKRDANDRNISEYFTKNPTKPQQKPKIVKTDDDVDFMANLLGEVDSNIPAPAPRIPK 182
Query: 197 NTKTNE-----IVIPKEEPPAPTAKEYLANF-----SKPIKVEKKIEKPIKKEPSPLKDE 246
++ E + P EP K A + P+ + P+ ++P P D
Sbjct: 183 QERSGERRKSRALSPAPEPAGKKQKRLHARLLSPQSTAPLSDDDGYMPPLDEDPVPASDV 242
Query: 247 IKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIE 306
+ S+ + VA++ + L ++++ +D D+
Sbjct: 243 LMSDPAPSSPAAKVAQRKAQ------LKQEIKKEDSDD---------------------- 274
Query: 307 SQSIEEKVDVTNVESVSSA-VELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRT 365
EE ++V + SV++A V L++S P + + K+E + P++S P
Sbjct: 275 ----EETIEVAHAASVTTASVNLASSRPIKKLRKEE--------LYPSPASSSPVKPVDD 322
Query: 366 ADDSL---------PLATDHENKKVFRMFFLDAFE----------DIYKQPGTVYLFGKV 406
D S ++ E + + +M DA E D + G++ LFGKV
Sbjct: 323 VDSSSWNKLTEKLNVVSNPSETRGLGKMDHNDAIEADGSLNFFWTDYIEVNGSLCLFGKV 382
Query: 407 FVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKIL 462
K++ + SC V + NI RK+Y LPR + L+ T E V + VY+E D + T+ K+
Sbjct: 383 LNKKSKEYVSCFVKIDNILRKLYFLPREQRLRDGDQTDESVEMMDVYTEVDDLMTKMKVG 442
Query: 463 DFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLL 522
+K + +KYAF LPGVP ++Y+++ Y + +++G+TFSHVFG+ ++ E +
Sbjct: 443 MYKIKACTRKYAFELPGVPKEAQYMKLLYPYTNQPIDPNVTGETFSHVFGSNTALFEQFV 502
Query: 523 LERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQMEKIRITNVCGN----------VL 570
L + + GP WL+ +A+ F + S CK EV + + N V
Sbjct: 503 LWKNVMGPCWLKIQDAD-FGAIKHASHCKLEVLAEHPNMLSVATDSDNLDAPPLTMMSVA 561
Query: 571 SRTLMGGRSERNEFLLLHAFHEKSYVLPD 599
RT + + E L + A + +L D
Sbjct: 562 LRTAFNSKENKQEILAISARIYEKVLLSD 590
>gi|322693770|gb|EFY85619.1| DNA polymerase alpha catalytic subunit, putative [Metarhizium acridum
CQMa 102]
Length = 1464
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 287/726 (39%), Positives = 405/726 (55%), Gaps = 67/726 (9%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--Y 602
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ
Sbjct: 760 IAALALSVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQSFR 818
Query: 603 GKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNIC 662
G+ K+E E EA +K G LV EP++G YDKF+++MDFNSLYPSIIQE+NIC
Sbjct: 819 GRQKREDENQEEAVGEGKKKDKYKGG-LVFEPERGLYDKFVLVMDFNSLYPSIIQEFNIC 877
Query: 663 FTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
FTT+ L D + +P Q D GILP I LV RRQVKALMK N + + L
Sbjct: 878 FTTVDRTALADDE--DAVPEVPTDQ-DQGILPRLIATLVGRRRQVKALMKDKNATLEQLA 934
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIY 782
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIY
Sbjct: 935 TWDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESKSLQVIY 994
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
GDTDS+MI+ NV+ FK+GN+ K N YK LE+DID V++ +LL KKKYAA+++
Sbjct: 995 GDTDSVMINANVDSVADAFKVGNEFKKAVNDQYKLLEIDIDNVFRRILLQAKKKYAAINL 1054
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL--DEQSYTDYSLDDRLQNIH 900
+ +GK + E+KG+D+ RR++ L+ E K ++ +IL DE + IH
Sbjct: 1055 IE-KDGKFVEKMEVKGLDMKRREYCALSKEISKHLLDEILSGDEAEVV-------ITRIH 1106
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
E+++ I + +P+ I QL K P EY + ++P VQVALR + K +++GD
Sbjct: 1107 EYLRDIAGKMRAQSIPVAKYIIYTQLGKGPTEYPNADSMPQVQVALR-DIARGKTIRKGD 1165
Query: 961 TISYIICEDGT-SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+SYII DGT SE A +RAY +LK++S L DV +YL +QI P V RL I GT
Sbjct: 1166 VVSYIITGDGTSSEPAPKRAYAPADLKSDSTLVPDVEWYLGKQIFPPVERLCANIVGTST 1225
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAE-----EVKYQFCDKFEFTCMNPSC 1074
++AE LGLD Y S ++ Q S + L + E EV++ C + C C
Sbjct: 1226 SQLAEQLGLDIRRYSSN--QTQQNSSNDDLEIHPLESQIPDEVRFGDCARLCLRCRK--C 1281
Query: 1075 KQVNTVE----APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
K E +P +S GV+ C +P + +I ++ + +YY
Sbjct: 1282 KASTRFEGLVISPDGVSASGVL-----CGGCGAVIPTLS----VIAQVEHAVRSQTSRYY 1332
Query: 1131 EGWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFF 1181
EGWL C+D C + TR RC P GL R C +Y+ YTE +Y QL +F
Sbjct: 1333 EGWLVCDDSQCGNRTRQMSVYGTRCLGPKGL-ARDCLGRMRYE----YTEKAIYNQLVYF 1387
Query: 1182 HYICDITKALTKS-DTPS-----------IKFDSETYMGYCKMKQHVERFLESSAYNIVD 1229
+ D+ KA +K+ DT + + + + +K V+++L+ V
Sbjct: 1388 SSLWDVDKARSKALDTNNSTLSRQERDTILALAEHNRVRFGTVKGVVDKYLDKCGRQWVA 1447
Query: 1230 LKKLFS 1235
+ LF+
Sbjct: 1448 MDTLFA 1453
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 21/221 (9%)
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TK 440
FF + +I G++ LFGKV K+ S+ SC V + NI RK+Y LPR + ++ T
Sbjct: 346 FFWTDYTEIN---GSLCLFGKVLNKKTQSYVSCFVQIDNILRKLYFLPRQQRVRDGEGTD 402
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
E V +A VY E D+I T+ K+ +K + +KYAF LP VP ++Y+++ Y P +
Sbjct: 403 ETVGMADVYEEVDEIMTKMKVNMYKIKACTRKYAFELPDVPKEAQYMKLFYPYTKPQIDV 462
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQME 558
+G+T+SHVFG ++ E +L + I GP WL+ +A+ F + S CK EV
Sbjct: 463 -AAGETYSHVFGANTALFEQFVLWKNIMGPCWLKIQDAD-FGAIKNASHCKLEVLAEHPN 520
Query: 559 KIRITNVCGN----------VLSRTLMGGRSERNEFLLLHA 589
+ + N V RT + R E L + A
Sbjct: 521 MVSPISESDNLDAPPLTLMSVAIRTAFNAKENRQEILAISA 561
>gi|30984123|dbj|BAC76767.1| DNA polymerase alpha catalytic subunit [Coprinopsis cinerea]
Length = 1426
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 271/694 (39%), Positives = 394/694 (56%), Gaps = 47/694 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN---KKEGEETGEANK 617
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK YGK K+ +E G+A K
Sbjct: 756 QLTNLAGNAWNKTLNGGRAERNEYILLHEFHRLKYICPDKTYGKKTVPKETADEEGDAPK 815
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
K K+ Y GGLV EPK+G +D +I++MDFNSLYPSIIQEYNI FTT+ + ++
Sbjct: 816 SKA-KRDKYKGGLVFEPKRGLWDSYILVMDFNSLYPSIIQEYNIDFTTVDPPEVDENGEE 874
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
+ + P D G+LP I LV RRQVK+LMK + L+QYDI+Q+ALKLTANS
Sbjct: 875 KIPD--PPSDKDKGVLPRLIATLVNRRRQVKSLMKDRTATPAKLLQYDIKQQALKLTANS 932
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
MYGCLGF SRF+A+PLAAL T KGREIL T+ L E+LN +VIYGDTDS+ ++ VND+
Sbjct: 933 MYGCLGFEYSRFYARPLAALTTFKGREILTRTRELAESLNLDVIYGDTDSVFVNSGVNDF 992
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
K K N Y LE+D+D V++ +LLL+KKKYAAL + S S E+K
Sbjct: 993 AEALKTSAIFKKAVNDQYNLLEIDLDCVFQRLLLLQKKKYAALKVEDGSR----TSVEVK 1048
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+D+ RR++ L+ E ++V+++IL + S +D ++ IHE++ + ++ +G V L
Sbjct: 1049 GLDMKRREYCALSKEVSQYVLARIL-----SGDSTEDVVETIHEYLGTMSQNVRSGQVKL 1103
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC----EDGTSE 973
+ K+L K PE+Y D K+ PHVQVALR+ + + GD I YI C E+
Sbjct: 1104 EDFIVFKRLGKNPEDYPDAKSQPHVQVALRM-KAKGQSARGGDVIPYIFCLGEGEESART 1162
Query: 974 AATQRAYNIEELKNNSK-LKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
RA + +E++ + +KID +YL+ Q+ P + RL + IEGTD R+AECLGLD +
Sbjct: 1163 TQADRARHPDEVRRGAGVVKIDYEWYLAHQVLPPIERLCDAIEGTDRARLAECLGLDPNR 1222
Query: 1033 YRSQIK--ESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ----VNTVEAPTRL 1086
YR+ E S ++ + E +++ D FE C + K ++ P +
Sbjct: 1223 YRTTTASDEKFFMSLDSQMSDAE----RFKDADPFEVRCKSCQGKTKFPLLHDRTIPL-V 1277
Query: 1087 STHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
GV + C P V +L +L + +I KYYEGW C++ C + TR
Sbjct: 1278 RASGVTCL--SCDKPIAGV-------NLQLQLEVQIRAHISKYYEGWTVCDEQTCKNRTR 1328
Query: 1147 RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL-----TKSDTPSIKF 1201
+ K L C + ++ Y++ +LY QL ++ Y+ D KAL T S+ +
Sbjct: 1329 AMGVYGKRCLKPGC-RGRVSFEYSDTKLYNQLRYYKYLFDREKALKAARGTGSEEEVLAV 1387
Query: 1202 DSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ VE++L VDL +FS
Sbjct: 1388 VGSQATLLNNLSDVVEKYLNQCGRRWVDLNSIFS 1421
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL---- 437
R F++D E G +YL GK+ K++++ SCCV + ++R +Y LPR + +
Sbjct: 323 LRFFWIDYLE----HEGRLYLVGKLKDKKSDTWVSCCVTIDGLERNLYALPREKRIDFDE 378
Query: 438 ------KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVR 490
+T E + V +F+Q+ KI +K+R +++ YAF VP + +L++
Sbjct: 379 DTGEVTETDEIPTDEDVLDDFEQLRQNMKIKSYKTRFVKRNYAFGEKDVPRGETGWLKIV 438
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKY 550
Y + P P + SH+FGT +S E +L+RKI GP WLE +SWC++
Sbjct: 439 YHSLNPD-PMGVWSPNISHIFGTNTSAFEIFVLKRKIMGPCWLEIKNPVVEFKGVSWCRF 497
Query: 551 EV 552
E
Sbjct: 498 EA 499
Score = 44.7 bits (104), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 53 DKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWI--DDD 109
+K +K A +LK + G + E D+ +Y+E+SE EY V R Q DD++ D +
Sbjct: 12 EKVSKLEALAELKRARAGGKRILKE--EDDQIYDEISEDEYRNIVKGRLQRDDFVIEDGE 69
Query: 110 GGDGYVEDGREIF----DDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK 165
G GYV++G + + D ED + K K K+ P K +
Sbjct: 70 GSSGYVDNGEDDWLDTRDASDEDSDRGKRKTSKKNGKAKTTKPKEKAKPAPPPVAPSINA 129
Query: 166 KKKEEVQLNNDDVLADLLSEVNTTIAPTL 194
+ + D +A LL +++ T AP +
Sbjct: 130 YRPQVSVEQEQDFMAGLLGQLDKTPAPRV 158
>gi|406695133|gb|EKC98448.1| DNA polymerase alpha catalytic subunit [Trichosporon asahii var.
asahii CBS 8904]
Length = 1445
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 285/714 (39%), Positives = 412/714 (57%), Gaps = 66/714 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-----KEGEETGEA 615
++TN+ GN + TL GGR+ RNEF+LLH FH+ YV PDK + K ++GEE E
Sbjct: 761 QLTNLAGNSWNLTLNGGRAVRNEFILLHEFHKLKYVCPDKTFKNTKIKFINEDGEEQ-EV 819
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 675
+ G R KA Y+GGLV EPK+G +D +I++MDFNSLYPSIIQEYNI FTT+ + D
Sbjct: 820 SAGHKRGKAKYAGGLVFEPKRGLWDTYILVMDFNSLYPSIIQEYNIDFTTVEREDCEGED 879
Query: 676 ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+ + +P V G+LP I LV+ RRQVK LMK + + L Q+DI+Q+ALKLTA
Sbjct: 880 EEKIPD-VPSRDVAQGVLPRIIATLVQRRRQVKGLMKDKSAGAAKLQQWDIKQQALKLTA 938
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
NSMYGCLGF SRF ++PLAAL T KGREIL +T+ L E+L+ +V+YGDTDS+ ++ NV
Sbjct: 939 NSMYGCLGFAGSRFSSRPLAALTTFKGREILTHTRELAESLSLDVVYGDTDSVFVNSNVV 998
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQE 855
Y KI N+ K N+ YK LE+D+D ++ +LLL KKKYAA+ I + GK S E
Sbjct: 999 SYPEAVKIANEFKKLVNERYKLLEIDLDATFERVLLLNKKKYAAVKIDEA--GKK--STE 1054
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLDN 912
IKG+D+ RR++S+L+ +A V+ +IL S DD ++ IHE++ ++ + +
Sbjct: 1055 IKGLDMKRREFSKLSKDASSSVLKEIL--------SGDDTEKVVEKIHEYLIQLGEIVRS 1106
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDG 970
G VPL I K PE+Y D+K+ PHVQVALR+ + ++ D I YI+C DG
Sbjct: 1107 GAVPLDDFIIYKN----PEDYPDKKSQPHVQVALRMKAKGT-AVRAHDVIPYILCLGPDG 1161
Query: 971 TSEAATQ--RAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
S + Q +A++ ++L + S+LKID + YL Q+ + RL E IEGT+ R+AECLG
Sbjct: 1162 KSAKSAQADKAFHPDDLRRQGSELKIDYDLYLDSQVLQPILRLCESIEGTERSRLAECLG 1221
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCK---QVNTVEAPT 1084
LD + Y SQ +++ + + L ++E +++ +K C PSC + +E
Sbjct: 1222 LDPTRYVSQT-QNVHERQFFTLESQISDEERFRDAEKLSLKC--PSCAVTFEFEGIEQNL 1278
Query: 1085 RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDM--NKYIVKYYEGWLKCEDP-GC 1141
+++ G V C P C +P L ++ KYI +YY GW C+ P GC
Sbjct: 1279 KINQSGQAGV--AC--PSCA----NMIPQASVALQVELLIRKYIARYYLGWTVCDGPDGC 1330
Query: 1142 SDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS 1194
TR RC LG +R C K + Y++ +LY QL +F ++ D K L K+
Sbjct: 1331 GQRTRNVSVYAKRC-LGF-SREGGRC-KGSVRLEYSDTELYNQLLYFRHLFDGDKLLDKA 1387
Query: 1195 ------DTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFSCEEKQPK 1242
D + +S M + V+RFL + VD++ LF + +PK
Sbjct: 1388 KGTGRYDEVRLLVNSNQQM-ISSLTDEVDRFLNKNGRRFVDMRSLFGFMDNRPK 1440
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
E RMF+LD E Q G V+L GKV +++N + S C+ + I R +++ PR++
Sbjct: 329 EQDGSLRMFWLDFQE----QDGVVHLIGKVLDRQSNKYVSACLSINGIQRNLFIKPRAKR 384
Query: 437 L----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRY 491
+ ++ V VY+EFD + +++ I ++K + +++KYAF + SE+++V Y
Sbjct: 385 MVGQTESDMDVDKTDVYTEFDSVRSKHGIDEWKCKFVQRKYAFEDHDIERGESEWMKVTY 444
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYE 551
P +P +G TFSH+FGT ++ E L+L+R+I GP WL A SWCK E
Sbjct: 445 PFTQPEIPMGTTGATFSHIFGTNTTAFELLVLKRRIMGPCWLNITGAVPSTKATSWCKIE 504
Query: 552 VQCN 555
+
Sbjct: 505 FTVD 508
>gi|393221988|gb|EJD07472.1| hypothetical protein FOMMEDRAFT_137775 [Fomitiporia mediterranea
MF3/22]
Length = 1441
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 270/699 (38%), Positives = 393/699 (56%), Gaps = 49/699 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK +GK +G G
Sbjct: 764 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKTFGKKVAAAAAVKAEAEGDG 823
Query: 621 -------RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
K+ Y GGLV EPK+G +DK+I++MDFNSLYPSIIQEYNI FTT+ ++
Sbjct: 824 VVPVTQKSKRDKYKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTTVERADSEE 883
Query: 674 SDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKL 733
+ + + P V G+LP I LV RR+VK LMK + ++QYDI+Q+ALKL
Sbjct: 884 GEEEKIPDP-PSSDVPQGVLPRLIATLVARRREVKKLMKDRSTPHAKMLQYDIKQQALKL 942
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCN 793
TANSMYGCLGF SRF+A+PLAAL T KGREIL T+ L EN +VIYGDTDS+ ++ N
Sbjct: 943 TANSMYGCLGFEYSRFYARPLAALTTYKGREILARTRELAENQGLDVIYGDTDSIFVNSN 1002
Query: 794 VNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICS 853
V + +I + K N+ Y +LE+D+DG+++ +LLL+KKKYAAL + S
Sbjct: 1003 VTELPQALRISDTFKKLVNEQYVKLEIDLDGIFQRLLLLQKKKYAALKVEDAER----TS 1058
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
E+KG+D+ RR++ QL+ + ++ +L + + + ++ IHEH+ K+ ++
Sbjct: 1059 VEVKGLDMKRREYCQLSKDTSHHILEMVLSGE-----ATETVVEQIHEHLSKLGEEVRGD 1113
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
+ L I K+L K PE+Y D K+ PHV VALRL + ++ + GD I YI C + +E
Sbjct: 1114 KINLDKFIINKRLGKNPEDYPDAKSQPHVTVALRL-KSKGQQPRAGDVIPYIFCLNEGAE 1172
Query: 974 ----AATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
A RA++ +EL+ N +LKID +YLSQQI P + RL EPIEGTD R+AECLGL
Sbjct: 1173 SMKSAQADRAHHPDELRRANGELKIDYEFYLSQQILPPIERLCEPIEGTDRARLAECLGL 1232
Query: 1029 DTSLYRSQIKESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMNPSCKQVNTVEAP-T 1084
D +RS S++ G E++ V+++ CD C C+ E P T
Sbjct: 1233 DPGRFRSHYN---GDSDDRAFGTLESQMPDNVRFKDCDPLTIRCRK--CEG----EMPFT 1283
Query: 1085 RLSTHGVVFVLDECINPECK---VPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+S G + + P CK P T + +L + ++I +YYEGW C+DP C
Sbjct: 1284 HISERGTSII--QTSGPTCKGCQAPLKTTSMQM--QLENQIREHINRYYEGWTVCDDPMC 1339
Query: 1142 SDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKF 1201
+ TR + + L C K + Y++ QLY QL F+ + K L + K
Sbjct: 1340 RNRTRMMSVYGRRCLKREC-KGTVAFEYSDNQLYTQLMFYSSLVCPEKVLKSAIASPQKS 1398
Query: 1202 DSETYMGYCK-----MKQHVERFLESSAYNIVDLKKLFS 1235
+ + + M + V+++L V+L LFS
Sbjct: 1399 TIDAAVQNNRKLLDDMNEIVDKYLSQCGRRWVELGNLFS 1437
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 254/549 (46%), Gaps = 71/549 (12%)
Query: 47 AKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDW 105
+ R+K K +K AA+++ ++ G+ K + D VY+EV E++Y V R Q DD+
Sbjct: 2 SHRRKNAKPDKLAAYKRAREGGGRDWKPE----EDVEVYDEVDEEQYKSIVKGRLQRDDF 57
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK 165
I DDG DGY ++G DD ED + ++ K K+ K + K
Sbjct: 58 IVDDGVDGYADNG---MDDWGEDQGMESDEEVKPKEKKKSKLVKTKPAPPPPPVATFNDY 114
Query: 166 KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK--------- 216
K+K + DD ++ LL ++ + P + ++ + P++ P ++
Sbjct: 115 KQKPSAAVE-DDFMSSLLGKMEK-VTPDTRFRSRKRK---PRDISPLTSSSPDDFNGYRA 169
Query: 217 --EYLAN---------FSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEM-NVAEQS 264
++ A+ +S P + I P K++ +++ +V + ++ NVA S
Sbjct: 170 PGDFYADTSSDGPIDEYSVPPSDDLDISGPFKRQ---RREDADVKPAVQKFKIFNVATSS 226
Query: 265 K--EEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESV 322
+ P DD L DD D S+ T D E+ K +++I +E ++ +D+ N
Sbjct: 227 EGLSTPYDDSL------DDIDMSEFTHD--EEELKPKIEIVKME----DDDMDLLNHRHA 274
Query: 323 SSAVELSTSPPPQVVEKKEHKCAEWEAIQT-----EPSTSEPQVHSRTADDSLPLATDHE 377
+ ++ VEK E + W + + S + R+A+ E
Sbjct: 275 KESNAVNNVK----VEKMEDETPSWVNVHASLKVEKNDDSLGPLGGRSANVRSSNVAALE 330
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
+ R F++D E Q G V+ GK+ K+ SCC+ V+N++R +++L R + L
Sbjct: 331 DDGSLRFFWIDYLE----QDGNVHFIGKLKDKKTKLWVSCCLTVENLERNLFVLSRPKKL 386
Query: 438 KTKEPVSIA----QVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSE--YLEVRY 491
+ I V +FD + + I FKS+ +++KYAF P VP L+E +++V+Y
Sbjct: 387 EDGHETDIVPDNLDVAKDFDALRKKAGINKFKSKFVKRKYAFGEPDVP-LNEHSWMKVKY 445
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYE 551
P L +L DT + +FGT++S E L+L+RKI GP WL+ E ISWCK+E
Sbjct: 446 PFSEPQLSENLQTDTIARIFGTRTSAFELLVLKRKIMGPCWLQIKEPHVEHKGISWCKFE 505
Query: 552 VQCNQMEKI 560
+ + I
Sbjct: 506 ATVSNPKDI 514
>gi|401885415|gb|EJT49533.1| DNA polymerase alpha catalytic subunit [Trichosporon asahii var.
asahii CBS 2479]
Length = 1445
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 285/714 (39%), Positives = 411/714 (57%), Gaps = 66/714 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-----KEGEETGEA 615
++TN+ GN + TL GGR+ RNEF+LLH FH+ YV PDK + K ++GEE E
Sbjct: 761 QLTNLAGNSWNLTLNGGRAVRNEFILLHEFHKLKYVCPDKTFKNTKIKFINEDGEEQ-EV 819
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 675
+ G R KA Y+GGLV EPK+G +D +I++MDFNSLYPSIIQEYNI FTT+ + D
Sbjct: 820 SAGHKRGKAKYAGGLVFEPKRGLWDTYILVMDFNSLYPSIIQEYNIDFTTVEREDCEGED 879
Query: 676 ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+ + +P V G+LP I LV+ RRQVK LMK + + L Q+DI+Q+ALKLTA
Sbjct: 880 EEKIPD-VPSRDVAQGVLPRIIATLVQRRRQVKGLMKDKSAGAAKLQQWDIKQQALKLTA 938
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
NSMYGCLGF SRF ++PLAAL T KGREIL +T+ L E+L+ +V+YGDTDS+ ++ NV
Sbjct: 939 NSMYGCLGFAGSRFSSRPLAALTTFKGREILTHTRELAESLSLDVVYGDTDSVFVNSNVV 998
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQE 855
Y KI N+ K N+ YK LE+D+D ++ +LLL KKKYAA+ I + GK S E
Sbjct: 999 SYPEAVKIANEFKKLVNERYKLLEIDLDATFERVLLLNKKKYAAVKIDEA--GKK--STE 1054
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLDN 912
IKG+D+ RR++S+L+ +A V+ +IL S DD ++ IHE++ ++ + +
Sbjct: 1055 IKGLDMKRREFSKLSKDASSSVLKEIL--------SGDDTEKVVEKIHEYLIQLGEIVRS 1106
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDG 970
G VPL I K PE+Y D+K+ PHVQVALR+ ++ D I YI+C DG
Sbjct: 1107 GAVPLDDFIIYKN----PEDYPDKKSQPHVQVALRM-KAKGIAVRAHDVIPYILCLGPDG 1161
Query: 971 TSEAATQ--RAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
S + Q +A++ ++L + S+LKID + YL Q+ + RL E IEGT+ R+AECLG
Sbjct: 1162 KSAKSAQADKAFHPDDLRRQGSELKIDYDLYLDSQVLQPILRLCESIEGTERSRLAECLG 1221
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCK---QVNTVEAPT 1084
LD + Y SQ +++ + + L ++E +++ +K C PSC + +E
Sbjct: 1222 LDPTRYVSQT-QNVHERQFFTLESQISDEERFRDAEKLSLKC--PSCAVTFEFEGIEQNL 1278
Query: 1085 RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDM--NKYIVKYYEGWLKCEDP-GC 1141
+++ G V C P C +P L ++ KYI +YY GW C+ P GC
Sbjct: 1279 KINQSGQAGV--AC--PSCA----NMIPQASVALQVELLIRKYIARYYLGWTVCDGPDGC 1330
Query: 1142 SDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS 1194
TR RC LG +R C K + Y++ +LY QL +F ++ D K L K+
Sbjct: 1331 GQRTRNVSVYAKRC-LGF-SREGGRC-KGSVRLEYSDTELYNQLLYFRHLFDGDKLLDKA 1387
Query: 1195 ------DTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFSCEEKQPK 1242
D + +S M + V+RFL + VD++ LF + +PK
Sbjct: 1388 KGTGRYDEVRLLVNSNQQM-ISSLTDEVDRFLNKNGRRFVDMRSLFGFMDNRPK 1440
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
E RMF+LD E Q G V+L GKV +++N + S C+ + I R +++ PR++
Sbjct: 329 EQDGSLRMFWLDFQE----QDGVVHLIGKVLDRQSNKYVSACLSINGIQRNLFIKPRAKR 384
Query: 437 L----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRY 491
+ ++ V VY+EFD + +++ I ++K + +++KYAF + SE+++V Y
Sbjct: 385 MVGQTESDMDVDKTDVYTEFDSVRSKHGIDEWKCKFVQRKYAFEDHDIERGESEWMKVTY 444
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYE 551
P +P +G TFSH+FGT ++ E L+L+R+I GP WL A SWCK E
Sbjct: 445 PFTQPEIPMGTTGATFSHIFGTNTTAFELLVLKRRIMGPCWLNITGAVPSTKATSWCKIE 504
Query: 552 VQCN 555
+
Sbjct: 505 FTVD 508
>gi|358397908|gb|EHK47276.1| hypothetical protein TRIATDRAFT_282724 [Trichoderma atroviride IMI
206040]
Length = 1468
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 279/718 (38%), Positives = 414/718 (57%), Gaps = 52/718 (7%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDKQ K
Sbjct: 761 IAALAVSVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFYRNKYICPDKQTFK 819
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+++ EE + G+G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFT
Sbjct: 820 GRQKAEEENDEEAGEGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFT 879
Query: 665 TIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
T+ D D + E +P +Q D GILP I LV RRQVK+LMK + + L +
Sbjct: 880 TVDRTTSADDDGDAVPE-VPVNQ-DQGILPRLIATLVSRRRQVKSLMKDKKATPEQLATW 937
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGD 784
DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYGD
Sbjct: 938 DIKQLALKLTANSMYGCLGYTKSRFYARPLAILTTHKGREILRSTKDLAESKSLQVIYGD 997
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+MI+ NV++ FK+GN+ K N+ Y+ LE+DID V++ +LL KKKYAA+++ +
Sbjct: 998 TDSVMINANVDNVADAFKVGNEFKKAVNEQYRLLEIDIDNVFRRILLQAKKKYAAINLIE 1057
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+GK I E+KG+D+ RR++ L+ E K ++ +IL + ++ + IHE+++
Sbjct: 1058 -KDGKFIEKMEVKGLDMKRREYCALSKEVSKHLLDEIL-----SGDDIEVAVARIHEYLR 1111
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
+ T + VP+ I QL K P+EY + ++P VQVALR + K +++GD ISY
Sbjct: 1112 ETATKMREFTVPVPKYTIYTQLGKGPKEYPNADSMPQVQVALR-DLARGKTVRKGDVISY 1170
Query: 965 IICEDG-TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIA 1023
I+ +SE A +RAY +LK + L+ DV++Y+++QI P V RL I GT ++A
Sbjct: 1171 IVTGTSQSSEPAPKRAYAPPDLKADPNLQPDVDWYIAKQIFPPVERLCANIAGTSTSQLA 1230
Query: 1024 ECLGLDTSLYRSQIKESIQQSEENILGVGEAE-----EVKYQFCDKFEFTCMNPSCKQVN 1078
E LGLD Y S ++ Q S + L + E EV++ C + C CK
Sbjct: 1231 EQLGLDVRRYSST--QTQQNSSSDDLEIHPLESQIPDEVRFVDCKRLSLRCRK--CKAST 1286
Query: 1079 TVE----APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWL 1134
E + R++ GV C +P + ++ ++ + +YYEGWL
Sbjct: 1287 VFEGLMGSADRVTASGVT-----CPGCGAVIPTLS----VVAQVEHAVRLQTSQYYEGWL 1337
Query: 1135 KCEDPGCSDLTRR------CPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDIT 1188
C DP C + TR+ C LG K L C+ +H YTE +Y QL +F + D+
Sbjct: 1338 VCNDPQCGNRTRQMSVYGTCCLGPKG-LARDCNG-TMHYEYTEKAIYNQLVYFASLWDVD 1395
Query: 1189 KALTKSDTPSIKFDSE-----------TYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
KA T++ + + ++ + + +K V+++L+ V + LF+
Sbjct: 1396 KAKTRAADTTNEISTQEREKIRALAEHNRVRFTTVKTAVDKYLDKCGRQWVAMDTLFA 1453
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 150/543 (27%), Positives = 249/543 (45%), Gaps = 71/543 (13%)
Query: 51 KIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDD 109
K+D+ K A + L+ G+ Y+ +N+Y+EV E Y + V +R +DD++ DD
Sbjct: 3 KVDRRAKLAELKALRQ-AGKKAFESYQVEDADNLYDEVDEAGYKKIVRERLNQDDFVVDD 61
Query: 110 GGDGYVEDGREIFD--------DDIEDVPQKKEKHDKRKKNKNIQNPNAKGD-----IQK 156
G+GY +DGRE +D + E +P + KK+ +Q+ AK D I +
Sbjct: 62 NGEGYADDGREDWDRVRQYESDSEGEGLPARGRPSKASKKS--LQDEQAKRDANDRSISE 119
Query: 157 LLANMPVKKKKKEEV--QLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPT 214
K + K +V +DD LADLL EV+ + PAP
Sbjct: 120 YFTKGAGKAQPKPKVVKTKADDDFLADLLGEVDANVPA------------------PAPR 161
Query: 215 AKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL- 273
A SK + + +P + P+P K + + + + DDGL
Sbjct: 162 A-------SKIERSGGERRRPRELSPAPEPSSKKQKRVNIRLPSPSPPPASFDDDDDGLP 214
Query: 274 ----------WEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVS 323
M + D S V +A ++ + ++ + + E V+ V+
Sbjct: 215 APLIDDEPMGAADMPMSDPAPSSPAAKVAQRKALIKQEPQSDDDDDMMEIAHAGAVK-VA 273
Query: 324 SAVELSTSPPPQVVEKKEHKCAEWEAIQT--EPS-----TSEPQVHSRTADDSLPLATDH 376
S + P ++++++ + + +A T +P+ T + V S + +S +
Sbjct: 274 SVNMAGSRPVKKIIKEEPPQSSPVKAPDTSVDPTSWNELTEKLNVVSSSETESRGIGKID 333
Query: 377 ENKKVFRMFFLDAFEDIYKQ-PGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE 435
N + L+ F Y + G++ LFGKV K+ S+ SC V V NI RK+Y LPR +
Sbjct: 334 HNDAIEADGSLNFFWTDYTEINGSLCLFGKVLNKKTRSYVSCFVKVDNILRKLYFLPRQQ 393
Query: 436 HLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY 491
++ T E V + VY+E D+I T+ + FK +K E+KYAF L +P ++Y+++ Y
Sbjct: 394 RVRDGEETGEDVDMGDVYNEVDEIMTKMNVGMFKIKKCERKYAFELADIPKEADYMKLLY 453
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCK 549
P L D+ G+TFSHVFGT ++ E +L + I GP WL+ +A+ F + S CK
Sbjct: 454 PYTKPTLNMDVKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIQDAD-FGAIKNASHCK 512
Query: 550 YEV 552
EV
Sbjct: 513 LEV 515
>gi|10177597|dbj|BAB10944.1| DNA polymerase alpha 1 [Arabidopsis thaliana]
Length = 1492
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 284/681 (41%), Positives = 393/681 (57%), Gaps = 83/681 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK------------ 607
+++TN+ GN+ +TL G R++R E+ LLH FH K ++LPDK + K+
Sbjct: 808 LQLTNISGNLWGKTLQGARAQRIEYYLLHTFHSKKFILPDKISQRMKEIKSSKRRMDYAP 867
Query: 608 --------EGEETGEANKGKG---RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSII 656
+ + T E + KG +K AY+GGLVLEPK+G YDK+++L+DFNSLYPSII
Sbjct: 868 EDRNVDELDADLTLENDPSKGSKTKKGPAYAGGLVLEPKRGLYDKYVLLLDFNSLYPSII 927
Query: 657 QEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
QEYNICFTTIP +D LP Q GILP ++ LV R+ VK MK+
Sbjct: 928 QEYNICFTTIPRS--EDG-----VPRLPSSQT-PGILPKLMEHLVSIRKSVKLKMKKE-- 977
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN- 775
+ + DIRQ+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GR+IL T LV+N
Sbjct: 978 TGLKYWELDIRQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGRDILQRTVDLVQNH 1037
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
LN EVIYGDTDS+MI ++D + V I +++ E NK Y+ L++D DG+YK MLLL+KK
Sbjct: 1038 LNLEVIYGDTDSIMIHSGLDDIEEVKAIKSKVIQEVNKKYRCLKIDCDGIYKRMLLLRKK 1097
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYAA+ + + +GK E KGVD+VRRDWS L+ E G +S+IL S +D
Sbjct: 1098 KYAAVKL-QFKDGKPCEDIERKGVDMVRRDWSLLSKEIGDLCLSKIL-----YGGSCEDV 1151
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
++ IH + KI+ ++ NG V L ITK LTK P Y D K+ PHVQVALR+ K+
Sbjct: 1152 VEAIHNELMKIKEEMRNGQVALEKYVITKTLTKPPAAYPDSKSQPHVQVALRMRQRGYKE 1211
Query: 956 -LKQGDTISYIIC-EDGT-----SEAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVV 1007
DT+ YIIC E G S +RA + +E+K+ S+ +D++YYL+QQIHPVV
Sbjct: 1212 GFNAKDTVPYIICYEQGNASSASSAGIAERARHPDEVKSEGSRWLVDIDYYLAQQIHPVV 1271
Query: 1008 TRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEF 1067
+RL I+GT R+AECLGLD S YRS+ ++ L ++E +
Sbjct: 1272 SRLCAEIQGTSPERLAECLGLDPSKYRSKSNDATSSDPSTSLLFATSDEESKK------- 1324
Query: 1068 TCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYL--PHLI-NKLSQDMNK 1124
P+ + ++ L H C P+C+ T + P +I N++ + ++
Sbjct: 1325 ----PATPETEESDSTFWLKLH--------C--PKCQQEDSTGIISPAMIANQVKRQIDG 1370
Query: 1125 YIVKYYEGWLKCEDPGCSDLTRRCP----LGLKTRLCTTCHKY-----KLHRVYTELQLY 1175
++ YY+G + CED C T R P LG + R T C Y L R YTE LY
Sbjct: 1371 FVSMYYKGIMVCEDESCKHTT-RSPNFRLLGERER-GTVCPNYPNCNGTLLRKYTEADLY 1428
Query: 1176 QQLSFFHYICDITKALTKSDT 1196
+QLS+F +I D +L K D
Sbjct: 1429 KQLSYFCHILDTQCSLEKMDV 1449
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 28/207 (13%)
Query: 382 FRMFFLDAFEDIYKQP-GTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTK 440
R F LDA+E+ + GT+YLFGKV K +++ SCCV+V+NI R +Y +P +
Sbjct: 345 LRFFILDAYEEAFGASMGTIYLFGKV--KMGDTYKSCCVVVKNIQRCVYAIPNDSIFPSH 402
Query: 441 EPVSIAQ----------------------VYSEFDQIATQYKILDFKSRKIEKKYAFNLP 478
E + + Q + +E Q Q + +F +++ YAF P
Sbjct: 403 ELIMLEQEVKDSRLSPESFRGKLHEMASKLKNEIAQELLQLNVSNFSMAPVKRNYAFERP 462
Query: 479 GVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPE 537
VP +Y L++ YS K LP DL G++FS + G+ +S LE+ +L+RKI GP WL+
Sbjct: 463 DVPAGEQYVLKINYSFKDRPLPEDLKGESFSALLGSHTSALEHFILKRKIMGPCWLKISS 522
Query: 538 -AEKFPSR-ISWCKYEVQCNQMEKIRI 562
+ PS +SWCK+EV + I I
Sbjct: 523 FSTCSPSEGVSWCKFEVTVQSPKDITI 549
>gi|384252932|gb|EIE26407.1| hypothetical protein COCSUDRAFT_52325 [Coccomyxa subellipsoidea
C-169]
Length = 1243
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 281/726 (38%), Positives = 404/726 (55%), Gaps = 77/726 (10%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK------------- 607
+++ + G++ SRTL G R++R E LLLH F+ + ++LPDK G+ ++
Sbjct: 538 QLSCLSGSLWSRTLQGQRAQRIEMLLLHEFYARKFLLPDKLSGRERERLARRQHAAAHAD 597
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+GE E G + KA Y+GGLVLEPKKG Y+ ++L+DFNSLYPSIIQEYNICFTT
Sbjct: 598 DGEAFEEVKAGGKKGKAQYAGGLVLEPKKGLYNSIVLLLDFNSLYPSIIQEYNICFTT-- 655
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
VR +D I L E P H D +LP I+ LV+ RR+VK+L+ Q DIR
Sbjct: 656 VRRPKDGSIAPLPE--PSH--DLAVLPKVIRGLVQRRREVKSLLANER-DGVRRQQLDIR 710
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTD 786
Q+ALKLTANSMYGCLGF SRFFA+PLA LVTA+GR+IL +T LV++ + EVIYGDTD
Sbjct: 711 QQALKLTANSMYGCLGFSASRFFARPLAELVTAQGRDILQSTVDLVQSSVGLEVIYGDTD 770
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+M+ +V + +G ++K E NK YK LE+++D +YK MLLLKKKKYAA+ + + +
Sbjct: 771 SIMVRTDVAKEEEARAMGARVKREVNKRYKLLEIELDAMYKCMLLLKKKKYAAIKLDRDA 830
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
G+ + +E KG+D+VRRDW LA + G + + +IL + +D + IH ++++
Sbjct: 831 AGRTVEVKEAKGLDMVRRDWCALAKDCGNYALDEIL-----SGRPCEDVVSAIHARLRQV 885
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK-LKQGDTISYI 965
R +D G V L I KQLTK PE+Y D K PHVQVALR + ++ KQG+T+ YI
Sbjct: 886 REKVDAGAVTLDKFVIHKQLTKRPEDYPDAKNQPHVQVALRRAAAHKREGTKQGETVPYI 945
Query: 966 IC---------EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
IC +DG + +RAY+ EEL N L++DV YYL+ Q+HPVV+RL PIEG
Sbjct: 946 ICIEVDEAGQPKDGGAGGLAERAYHREELAANPALRVDVQYYLANQVHPVVSRLCAPIEG 1005
Query: 1017 TDAVRIAECLGLDTSLYRSQIK--ESIQQSEENILGVGEAE---EVKYQFCDKFEFTCMN 1071
TDA R+A+CLGLD + Y + ++ + E+ L A + +Y+ CD T +
Sbjct: 1006 TDAARLADCLGLDPAKYHAAAAAGSGMRDALEDALIASTATLDCDARYKDCDPLWLTSAD 1065
Query: 1072 PSCKQVNTVEAPTRLSTHGVVFVLDECINP--------ECKVPPYTYLPHLINKLSQDMN 1123
TR GV VL + P + N++
Sbjct: 1066 -----------GTRFPFVGVQDVLSGGVAPGDAFAPPDAAATGSGLSAAQVANQVRLRAR 1114
Query: 1124 KYIVKYYEGWLKCEDPGCSDLTRRCPL--------GLKT-RLCTTCHKYKLHRVYTELQL 1174
+ + KYYEG L +D TR L G+ + + + H + +E L
Sbjct: 1115 EAVAKYYEGSLVSDDELMPVNTRNVCLRAQGDAAPGMASPNVASAGH---MAAAMSEAAL 1171
Query: 1175 YQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCK-----MKQHVERFLESSAYNIVD 1229
Y QLS FH + D + AL + + + ++ + + ++ VE+ AY V
Sbjct: 1172 YTQLSHFHRLLDPSLALARLKDDTERLEATRRLAPIREALEAGRKAVEQLRNRCAYRWVS 1231
Query: 1230 LKKLFS 1235
L L++
Sbjct: 1232 LGSLYN 1237
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 105/212 (49%), Gaps = 33/212 (15%)
Query: 367 DDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDR 426
D SLPL F LDA E+ PGTVYLFGKV H SCC +++ R
Sbjct: 63 DGSLPLV-----DGTLPFFLLDAHEEA-ATPGTVYLFGKV--PNGGQHQSCCAVLEGCMR 114
Query: 427 KIYLLPR----------------SEHLKTKEPV------SIAQVYSEFDQIATQYKILDF 464
I+ +P+ + + K P+ A + +E + ++ I F
Sbjct: 115 CIFFVPQPGTFTGAELTRLEAEAAANPGAKGPLLRHLHEQAAALKAEVRAVLAEHGIDKF 174
Query: 465 KSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLL 523
+ + + YAF L VP ++ L+VRYSA P+LP+ L G+ F VFG + S LE++LL
Sbjct: 175 VIKPVRRNYAFELDSVPHGEQWVLKVRYSAAKPSLPNGLEGEHFVGVFGAQQSVLESVLL 234
Query: 524 ERKIKGPSWLEF--PEAEKFPSRISWCKYEVQ 553
+R+I GPSW+ P ++SWCK EV+
Sbjct: 235 KRRIMGPSWISLSCPTRVDASKQVSWCKLEVK 266
>gi|384487376|gb|EIE79556.1| hypothetical protein RO3G_04261 [Rhizopus delemar RA 99-880]
Length = 1319
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 265/631 (41%), Positives = 375/631 (59%), Gaps = 51/631 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN---- 616
++T + GN+ +RT+ G R+ERNEFLLLH FH+ Y+ PDK +G KE G+A
Sbjct: 696 QLTALAGNLWARTMTGARAERNEFLLLHEFHKAKYICPDKTFGN--KESVSVGQAVVQAA 753
Query: 617 ---------------KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
K GR+K AY+GGLVLEPKKGFYDK+++L+DFNSLYPSIIQEYN+
Sbjct: 754 EQDDDEDALKEVSNVKKSGRRKPAYAGGLVLEPKKGFYDKYVLLLDFNSLYPSIIQEYNV 813
Query: 662 CFTTIPVRMLQDSDITTLCEYLPEHQVDT---GILPSEIKKLVESRRQVKALMKQPNLSS 718
CFTT+ Q + E +P+ D+ GILP +K LV+ RRQVK MK S
Sbjct: 814 CFTTVDRSAFQQGNEKNEEEKVPDVPGDSVPEGILPKLLKTLVDRRRQVKNAMKGEK-SE 872
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNY 778
Q +IRQ+ALKLTANSMYGCLGF SRF+A+PLA L+T KGREIL +T +L NL+
Sbjct: 873 AKYNQLNIRQQALKLTANSMYGCLGFTYSRFYAKPLAMLITFKGREILQSTVNLAGNLDM 932
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
VIYGDTDS+M+ N ND + V K+GN ++ + N YK LE+ IDG +K+MLLLKKKKYA
Sbjct: 933 NVIYGDTDSIMVYTNQNDLNEVKKMGNLLRKKVNDHYKLLEIGIDGYFKHMLLLKKKKYA 992
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
AL + + NG+++ S E KG+D+VRRDW L+ + V+ IL +D D+ +
Sbjct: 993 ALLVEEKDNGELVESVETKGLDLVRRDWCDLSHDVSSHVLDLIL-----SDKERDEVVNE 1047
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
IH +++ + G +PL I KQLTK P++Y D K+ PHVQVALR+ + +K
Sbjct: 1048 IHTYLEVTVERIRQGEIPLEKYVINKQLTKRPQDYADAKSQPHVQVALRM-IAAGQGVKS 1106
Query: 959 GDTISYIICE-----DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
GDT+ Y+IC+ G + + RAY+ +++ + +++D+ +YL QQ+HP +TRL P
Sbjct: 1107 GDTVPYVICKVDEETSGDKKGSALRAYHPDDVVKKN-MQLDIEWYLQQQVHPPLTRLCSP 1165
Query: 1014 IEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILG----VGEAEEVKYQFCDKFEFTC 1069
IEGTD R+A CLGL+ S YR + + E+ ++ + +AE +++ + TC
Sbjct: 1166 IEGTDPARLAGCLGLEASRYR-HFSGGMGEDEQELVTLDSQISDAE--RFKSSEALLLTC 1222
Query: 1070 MNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKY 1129
N C + E R + + EC + L +L ++ YI +Y
Sbjct: 1223 NN--CDKEFKYEGILRQTEDTI-----ECGLKCVHCYQVIHYASLKAQLILNIRNYIDRY 1275
Query: 1130 YEGWLKCEDPGCSDLTRRCPLGLKTRLCTTC 1160
Y+GWL C+DP C + TR + + L C
Sbjct: 1276 YQGWLLCDDPTCGNRTRMISVFGRRCLADEC 1306
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 234/541 (43%), Gaps = 123/541 (22%)
Query: 81 DENVYEEVSEKEYTERVLKRQEDD-WIDDDGGDGYVEDGREI-------FDDDIEDVPQK 132
D+++YEE+ E +Y L Q+D+ +++DD GY+++G E ++ ++E +
Sbjct: 32 DDDLYEEIEENDY----LAIQDDEAFVEDDDKGGYIDNGEEEEYNYSDEYETEVEKISSG 87
Query: 133 KEKHDKR--------KKNKNIQNPNAKGDIQKLLANMPVKKK--KKEEVQLNNDDVLADL 182
K K + K N+ I + I+K A P+K K KEE +D L DL
Sbjct: 88 KRKRKIKQKQPSTPVKPNQQINKFFSSSMIKKHTAEKPIKHKPIDKEE----SDSFLNDL 143
Query: 183 LSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSP 242
LSE NT PT + + + +P E PA L+ PI+ + + + EP P
Sbjct: 144 LSEFNT---PTKQ--ERKAPVNVPVREKPAVNHLSRLSQMRTPIQRASLLAQQQQPEP-P 197
Query: 243 LKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQI 302
+ EI E +V S+ E E + DD N ++++
Sbjct: 198 IAQEIS--------EPSVPTSSELE------LESIDFDDIMN--------------DIKV 229
Query: 303 EAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVH 362
E+I +++++N + S +E +T P WE + S +
Sbjct: 230 ESIN------QIEMSNNKPTFSTLEPATIAP---------GLQGWE--DADASMIDTFAQ 272
Query: 363 SRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQ 422
++S + E+ + RM++ DA+E K+ G VYLF NS
Sbjct: 273 DTVKEESQSVNVFEEDGHL-RMWWYDAYE--RKEKGYVYLFAS-----GNS--------- 315
Query: 423 NIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPD 482
T + V I VY E ++ ++++I + S+K+ +KYAF L VP
Sbjct: 316 ----------------TDKEVEITDVYEEVSELFSKHRITKYASKKVSRKYAFELHDVPA 359
Query: 483 LSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP 542
S+YL+V Y + P+L +G TFS VFG + LE+ L++R I GP WL+ A+
Sbjct: 360 ESDYLKVLYDYEQPSLTGTETGKTFSRVFGANTGPLEHFLVKRDIMGPCWLDISGAQMSK 419
Query: 543 SRISWCKYEVQCNQMEKIR-ITNVCGN---------VLS---RTLMGGRSERNEFLLLHA 589
+ +WCK EV + + + + GN V+S RT+M + NE + A
Sbjct: 420 TSETWCKVEVTVEDPKTVNPLVDETGNRPIHVPPLIVMSLCLRTIMNSKKNVNEIVAASA 479
Query: 590 F 590
Sbjct: 480 L 480
>gi|164655126|ref|XP_001728694.1| hypothetical protein MGL_4173 [Malassezia globosa CBS 7966]
gi|159102577|gb|EDP41480.1| hypothetical protein MGL_4173 [Malassezia globosa CBS 7966]
Length = 1409
Score = 445 bits (1144), Expect = e-121, Method: Compositional matrix adjust.
Identities = 275/714 (38%), Positives = 397/714 (55%), Gaps = 69/714 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE-ETGEANKGK 619
++TN+ GN SRTL GGR+ERNE++LLH FH+K Y+ PDKQ +KK + E G A K K
Sbjct: 722 QLTNLAGNAWSRTLNGGRAERNEYILLHEFHKKKYICPDKQSMWDKKAAKKEEGSAKKEK 781
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
+ GGLV EPK+G +DK+I++MDFNSLYPSIIQEYNI FTT+ QD D
Sbjct: 782 ------FKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTTVERHADQDGDDV-- 833
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P V G+LP I LV RRQVKALMK + + +Q++I+Q+ALKLTANSMY
Sbjct: 834 -PDVPSSDVAQGVLPHLIATLVNRRRQVKALMKDKHAPALKQLQWNIKQQALKLTANSMY 892
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ NSRF+A+PLAAL T KGREIL T+ L E+++ +VIYGDTDS+MI+ DY +
Sbjct: 893 GCLGYENSRFYARPLAALTTFKGREILSTTRELAESMSLDVIYGDTDSVMINTRCIDYQA 952
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
KIG++ + N+ Y+ LE+DIDGV++ MLLL+KKKYAAL L N EIKG+
Sbjct: 953 AIKIGHEFRRAVNERYRLLEIDIDGVFQRMLLLQKKKYAAL----LVNETGATQTEIKGL 1008
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+ RR++ L+ A +V+ QIL + + + ++ +HE+++++ TD+ G +PL
Sbjct: 1009 DMKRREYCALSKRASAYVLEQILSGE-----ATETVVEKMHEYLQQLATDVREGRIPLDD 1063
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC------------ 967
I K+L K P++Y D + PHVQVALR+ N + + GD I Y+ C
Sbjct: 1064 YVIYKRLGKRPQDYPDAQNQPHVQVALRMLAKN-ETARSGDVIPYVFCVGPQTPSSNDSI 1122
Query: 968 ------------EDGTSEAATQRAYNIEELK---NNSKLKIDVNYYLSQQIHPVVTRLLE 1012
T +RA++ ++++ ++ ID +YLS QI P + RL +
Sbjct: 1123 NNSNHNSNNHHHHQHTKATQAERAFHPDDVRRHMDDPAYAIDYKHYLSLQILPPIERLAD 1182
Query: 1013 PIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENI-LGVGEAEEVKYQFCDKFEFTCMN 1071
+EGTD R+A CLGLD Y S S S E + L ++Y CD C
Sbjct: 1183 SMEGTDRSRLAACLGLDVHTYTSSSHASSDSSREWMTLESQVPSSIRYAHCDPLRVRCRQ 1242
Query: 1072 PSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYE 1131
A + ++ G L C P C +T LP L+ +L + +I +YYE
Sbjct: 1243 CGAVSDAVPLAHSARTSEGAAPWL-SC--PSCST-AWT-LPSLVVQLQLAIRAHIARYYE 1297
Query: 1132 GWLKCEDPGC---SDLTRRCPLGLKTRLCTT--CHKYKLHRVYTELQLYQQLSFFHYICD 1186
G C +P C S +T G+ + C C + K+ Y + LY QL ++ Y+ D
Sbjct: 1298 GVQTCTEPSCRASSTMT-----GVYSGRCVVPGC-RGKVLAQYPDKALYTQLCYYAYLFD 1351
Query: 1187 ITKALTKSDTPSIKFDSETYMGYCK-----MKQHVERFLESSAYNIVDLKKLFS 1235
T+A+ ++ + + + + V+++L +A V L KLFS
Sbjct: 1352 STQAMAETSEAAQHLRLRDTIDARRADLDVLYATVQQYLARNARRFVGLDKLFS 1405
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 11/185 (5%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
++ + F++D F+ G ++LFGKV + N + S V + ++R ++LLPR+
Sbjct: 286 QDDRSVHFFWIDYFD----ANGKIFLFGKVLDRATNKYVSASVAIDGMERCVFLLPRTRT 341
Query: 437 LKTKEPVSIA----QVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYS 492
+ + V+ EF+ + ++Y I + + + +KYAF LP VP YL+V+Y
Sbjct: 342 IVDGHETDMVPGEDDVFEEFETMRSRYGIKSWLGKWVRRKYAFELPDVPAEGPYLKVKYG 401
Query: 493 AKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE--KFPSRISWCKY 550
PALP+D+SG TFS FGT +S E L+L+R+I GP WL +A P R +W K
Sbjct: 402 FDEPALPADISGATFSRAFGTHTSAFELLVLKRRIMGPCWLRIEQASLPSGPPR-TWTKL 460
Query: 551 EVQCN 555
E++ +
Sbjct: 461 ELEVD 465
>gi|46122087|ref|XP_385597.1| hypothetical protein FG05421.1 [Gibberella zeae PH-1]
Length = 1494
Score = 445 bits (1144), Expect = e-121, Method: Compositional matrix adjust.
Identities = 286/716 (39%), Positives = 412/716 (57%), Gaps = 64/716 (8%)
Query: 552 VQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE 611
VQ + K+ +TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDKQ ++++ EE
Sbjct: 763 VQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFYRNKYICPDKQTFRSRQRAEE 821
Query: 612 TG-EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PV 668
E +G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICFTT+ P
Sbjct: 822 AQREGETAEGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICFTTVDRPD 881
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
D ++ + P +Q D GILP I LV RRQVK+LMK + + L +DI+Q
Sbjct: 882 TKEGDDEVPEV----PTNQ-DQGILPRLIATLVSRRRQVKSLMKDKKATPEELATWDIKQ 936
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYGDTDS+
Sbjct: 937 LALKLTANSMYGCLGYTKSRFYARPLAVLTTFKGREILRSTKELAESNSLQVIYGDTDSV 996
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
MI+ NV++ FK+GN+ K N+ YK LE+DID V++ +LL KKKYAA+++ + +G
Sbjct: 997 MINANVDNVADAFKVGNEFKKAVNEQYKLLEIDIDNVFRRILLQAKKKYAAINLVE-KDG 1055
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKK 905
K I EIKG+D+ RR++ L+ E + ++++IL S DD + IHE++ +
Sbjct: 1056 KFIEKMEIKGLDMKRREYCALSKEISQHLLNEIL--------SGDDTEVSIARIHEYLNE 1107
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
I + +P+ I QL KAP++Y D ++P VQVALR K +++GD I+Y+
Sbjct: 1108 IAGKMREQSIPVQKYIIHTQLGKAPQDYPDSNSMPQVQVALR-EMAKGKTVRKGDVIAYV 1166
Query: 966 ICEDG-TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
I D +SE A +RAY +LK +S L DV +Y+ +QI P V RL I GT ++AE
Sbjct: 1167 ITGDSNSSEPAPKRAYTPGDLKADSSLLPDVEWYIGKQIFPPVERLCANIVGTSTSQLAE 1226
Query: 1025 CLGLDTSLYRS---QIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVE 1081
LGLD Y S Q S E + L +EV++ C + C CK ++T E
Sbjct: 1227 QLGLDIKRYSSFQTQQNSSSNDLEIHPLDSQIPDEVRFGDCTRLSLRCRK--CKALSTFE 1284
Query: 1082 A----PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCE 1137
P R+S G++ C + V + ++ ++ + +YYEGWL C+
Sbjct: 1285 GLAATPERVSQSGIL-----CSSCGTLVSTLS----VVAQMEHAIRTQTSRYYEGWLICD 1335
Query: 1138 DPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDIT 1188
D C + TR RC P GL R C +Y+ YTE +Y QL +F + D+
Sbjct: 1336 DTQCGNRTRQMSVYGSRCLGPKGL-ARDCLGRMRYE----YTEKAIYTQLLYFASLWDVD 1390
Query: 1189 KALTKSD-TPSIKFDSETYMG--------YCKMKQHVERFLESSAYNIVDLKKLFS 1235
KA TK+ T + D E + + +K V+++L+ V + LF+
Sbjct: 1391 KAKTKAAITEMSRPDRENILALAEHNRVRFGNIKGVVDKYLDKCGRQWVAMDTLFT 1446
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 145/552 (26%), Positives = 251/552 (45%), Gaps = 70/552 (12%)
Query: 59 AAFQKLKDLKGQGVK--HKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +LK L+ G K Y+ +++Y+EV E Y + V +R +DD++ DD G+GY
Sbjct: 5 ARLAELKALRASGKKAFDNYKVADVDDLYDEVDEDGYKKVVRERLNQDDFVVDDNGEGYA 64
Query: 116 EDGREIFD------------DDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPV 163
+DGRE +D + P K K K ++ + + + DI +
Sbjct: 65 DDGREDWDRVQAYESDSEEEAGVRGRPSKAAK--KSRQEEQTKRDASDRDISEYFKGANR 122
Query: 164 KKKKKEEVQLN-NDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANF 222
+ K + V+ +DD L+DLL EV++ I ++ +K + + A L+
Sbjct: 123 TQPKPKAVKTKADDDFLSDLLGEVDSNIPEPVRHISKVERSGGGRRKARA------LSPA 176
Query: 223 SKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDW 282
+PI +KKI P P D+ E + P DD L E +
Sbjct: 177 PEPISKKKKIIDTRMSSPPPALDD---------------EDNFFPPADDDLLETADVPMS 221
Query: 283 DNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSS-AVELSTSPPPQVVEKKE 341
D + + Q K +++ E + ++ ++V + ++++ +V L++ P + + K
Sbjct: 222 DPAPSSPAAKVAQRKAQIKQEPKDDDDDDDMMEVAHTGAIATTSVNLTSKRPIKKIIK-- 279
Query: 342 HKCAEWEAIQTEPSTSEPQVHSRTADDSLPL--------ATDHENKKVFRMFFLDAFE-- 391
A+ + S +P V S A L ++ E K + ++ DA E
Sbjct: 280 ---ADIDPTPASSSPVKPNVASVNATSWNALTERLNVVSSSPAEVKSIGKIDHKDAIEED 336
Query: 392 --------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----T 439
D + G+++LFGKV K+ S+ SC V V NI RK+Y LPR ++ T
Sbjct: 337 GSLNFFWTDYTELNGSLFLFGKVLNKKTKSYVSCFVKVDNILRKLYFLPREHRMQDGEET 396
Query: 440 KEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALP 499
E V + QVY E D + T+ + +K + +KYAF L VP ++Y+++ Y P +
Sbjct: 397 GEEVEMMQVYDEIDTMMTKMNVGMYKIKACTRKYAFELRDVPKEAQYMKLLYPYNKPEID 456
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEA--EKFPSRISWCKYEVQCNQM 557
+ G+T+SHVFG+ +S E +L + I GP WL+ +A +K + S CK EV +
Sbjct: 457 PNRPGETYSHVFGSNTSLFEQFVLWKNIMGPCWLKIEDADFDKLKN-ASHCKLEVVADHP 515
Query: 558 EKIRITNVCGNV 569
+ + + N+
Sbjct: 516 NMVSVLSESDNL 527
>gi|224096742|ref|XP_002310719.1| predicted protein [Populus trichocarpa]
gi|222853622|gb|EEE91169.1| predicted protein [Populus trichocarpa]
Length = 1312
Score = 444 bits (1143), Expect = e-121, Method: Compositional matrix adjust.
Identities = 290/698 (41%), Positives = 399/698 (57%), Gaps = 91/698 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-------------- 606
++TN+ GN+ +TL G R++R E+LLLHAFH K Y++PDK + K
Sbjct: 591 QLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKMSSRVKEAKITKRRINNGIE 650
Query: 607 -KEGEE--TGEAN---------KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPS 654
+ +E T AN GK +K AY+GGLVLEPKKG YDK+++L+DFNSLYPS
Sbjct: 651 DRNADELDTDAANFENDNQQSDHGKRKKGPAYAGGLVLEPKKGLYDKYVLLLDFNSLYPS 710
Query: 655 IIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP 714
IIQEYNICFTT+ + + L LP + TG+LP +K LVE RR VK+ MK
Sbjct: 711 IIQEYNICFTTV------ERSMDGLVPRLPSSKT-TGVLPELLKNLVERRRMVKSWMK-- 761
Query: 715 NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE 774
N S + Q DI+Q+ALKLTANSMYGCLGF NSRF+A+PLA L+T +GREIL +T LV+
Sbjct: 762 NASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQ 821
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
NLN EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK M LL
Sbjct: 822 NNLNLEVIYGDTDSIMIYSGLDDIPKAKAIAGKVIQEVNKKYRCLEIDLDGLYKRM-LLL 880
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KKK A + +G E KG+D+VRRDWS L+ E G F ++QIL + S +
Sbjct: 881 KKKKYAAVKVQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDFCLAQIL-----SGGSCE 935
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN- 952
D +++IH + K++ D+ +G V L ITK LTK PE Y D K PH VALRL +
Sbjct: 936 DVIESIHNSLMKVQEDMRSGQVALEKYVITKTLTKPPEAYPDAKNQPHALVALRLKQSGY 995
Query: 953 SKKLKQGDTISYII-CEDGTSEAA------TQRAYNIEELK-NNSKLKIDVNYYLSQQIH 1004
+ GDT+ YII CE G +A QRA + +ELK ++ K ID+ YYLSQQIH
Sbjct: 996 TAGCSAGDTVPYIICCEQGAGASAVSLTGIAQRARHPDELKCDDGKWIIDIEYYLSQQIH 1055
Query: 1005 PVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDK 1064
PVV+RL I+GT R+A+CLGLD+S +RS+ S ++L + EE +YQ C+
Sbjct: 1056 PVVSRLCASIQGTSPERLADCLGLDSSKFRSK--SSESVPSSSLLFAADDEE-RYQSCEP 1112
Query: 1065 FEFTCMNPSCKQVNTVEAPTRLSTHGVVFV-------LDECIN--------PEC------ 1103
+C PSC T P + + ++E I+ P+C
Sbjct: 1113 LILSC--PSCS--GTFHCPPVFISICTSILEKSKNPQIEESISNFWHRLCCPKCPEEGDL 1168
Query: 1104 -KVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTC 1160
++ P T + N++ + ++ YY+G + C+D C TR L L + T C
Sbjct: 1169 GRISPAT----MANQVKRQAEGFVSTYYKGVMMCDDETCKHTTRSLNLRLVGDSERGTVC 1224
Query: 1161 HKY-----KLHRVYTELQLYQQLSFFHYICDITKALTK 1193
Y +L R YTE LY+QLS+F ++ + + + K
Sbjct: 1225 PSYPRCNGRLVRKYTEADLYKQLSYFCHLLETARCIEK 1262
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 114/207 (55%), Gaps = 28/207 (13%)
Query: 384 MFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEP 442
+ LDA E+I+ GT+YLFGKV K N++ SCCV+V+N+ R +Y +P S +T E
Sbjct: 127 FYILDAHEEIFGANRGTIYLFGKV--KAGNTYHSCCVVVKNMHRCVYAIPNSSIFRTDEM 184
Query: 443 VSIAQ-------------------VYSEFDQIATQYKILD---FKSRKIEKKYAFNLPGV 480
+ + Y +++A+Q L+ F ++++YAF+ +
Sbjct: 185 SMLEKEVEESRISSTDFHKKLQDMAYELKNEVASQLLSLNVSSFSMAPVKRRYAFDRSDI 244
Query: 481 PDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
P Y L++ Y K P LP+DL G+TF + GT S LE L++RK+KGPSWL +
Sbjct: 245 PAGENYALKINYPFKEPPLPADLKGETFCALLGTHCSALELFLVKRKVKGPSWLSVSKFA 304
Query: 540 KFPS--RISWCKYEVQCNQMEKIRITN 564
P+ ++SWCK+E+ ++I++++
Sbjct: 305 TCPASQKVSWCKFEIIVESPKEIQVSS 331
>gi|408397181|gb|EKJ76331.1| hypothetical protein FPSE_03586 [Fusarium pseudograminearum CS3096]
Length = 1456
Score = 444 bits (1143), Expect = e-121, Method: Compositional matrix adjust.
Identities = 287/718 (39%), Positives = 412/718 (57%), Gaps = 68/718 (9%)
Query: 552 VQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE 611
VQ + K+ +TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDKQ ++++ EE
Sbjct: 765 VQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFYRNKYICPDKQSFRSRQRAEE 823
Query: 612 TG-EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PV 668
E +G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICFTT+ P
Sbjct: 824 AQREGETAEGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICFTTVDRPD 883
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
D ++ + P +Q D GILP I LV RRQVK+LMK + + L +DI+Q
Sbjct: 884 TKEGDDEVPEV----PTNQ-DQGILPRLIATLVSRRRQVKSLMKDKKATPEELATWDIKQ 938
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYGDTDS+
Sbjct: 939 LALKLTANSMYGCLGYTKSRFYARPLAVLTTFKGREILRSTKELAESNSLQVIYGDTDSV 998
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
MI+ NV++ FK+GN+ K N+ YK LE+DID V++ +LL KKKYAA+++ + +G
Sbjct: 999 MINANVDNVADAFKVGNEFKKAVNEQYKLLEIDIDNVFRRILLQAKKKYAAINLVE-KDG 1057
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKK 905
K I E+KG+D+ RR++ L+ E + ++++IL S DD + IHE++ +
Sbjct: 1058 KFIEKMEVKGLDMKRREYCALSKEISQHLLNEIL--------SGDDTEVSIARIHEYLNE 1109
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
I + +P+ I QL KAP++Y D ++P VQVALR K +++GD I+Y+
Sbjct: 1110 IAGKMREQSIPVQKYIIHTQLGKAPQDYPDSNSMPQVQVALR-EMAKGKTVRKGDVIAYV 1168
Query: 966 ICEDG-TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
I D +SE A +RAY +LK +S L DV +Y+ +QI P V RL I GT ++AE
Sbjct: 1169 ITGDSNSSEPAPKRAYTPGDLKADSSLLPDVEWYIGKQIFPPVERLCANIVGTSTSQLAE 1228
Query: 1025 CLGLDTSLYRS---QIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVE 1081
LGLD Y S Q S E + L +EV++ C + C CK ++T E
Sbjct: 1229 QLGLDIKRYSSFQTQQNSSSNDLEIHPLDSQIPDEVRFGDCTRLSLRCRK--CKALSTFE 1286
Query: 1082 A----PTRLSTHGVVFVLDECINPECKVPPYTYLPHL--INKLSQDMNKYIVKYYEGWLK 1135
P R+S G++ C P T + L + ++ + +YYEGWL
Sbjct: 1287 GLAATPERVSQSGIL----------CS-PCGTLISTLSVVAQMEHAIRTQTSRYYEGWLI 1335
Query: 1136 CEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICD 1186
C+D C + TR RC P GL R C +Y+ YTE +Y QL +F + D
Sbjct: 1336 CDDTQCGNRTRQMSVYGSRCLGPKGL-ARDCLGRMRYE----YTEKAIYTQLLYFASLWD 1390
Query: 1187 ITKALTKSD-TPSIKFDSETYMG--------YCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ KA TK+ T + D E + + +K V+++L+ V + LF+
Sbjct: 1391 VDKAKTKAAITEMSRPDRENILALAEHNRVRFGNIKGVVDKYLDKCGRQWVAMDTLFT 1448
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 147/554 (26%), Positives = 256/554 (46%), Gaps = 72/554 (12%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +LK L+ G K Y+ +++Y+EV E Y + V +R +DD++ DD G+GY
Sbjct: 5 ARLAELKALRASGKKAFDNYKVADVDDLYDEVDEDGYKKVVRERLNQDDFVVDDNGEGYA 64
Query: 116 EDGREIFD------------DDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPV 163
+DGRE +D + P K K R++ + ++ N + DI +
Sbjct: 65 DDGREDWDRVQAYESDSEEEAGVRGRPSKAAKK-SRQEEQTKRDANDR-DISEYFKGANR 122
Query: 164 KKKKKEEVQLN-NDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANF 222
+ K + V+ +DD L+DLL EV++ I ++ +K + + A L+
Sbjct: 123 TQPKPKAVKTKADDDFLSDLLGEVDSNIPEPVRHISKVERSGGGRRKARA------LSPA 176
Query: 223 SKPIKVEKKI-EKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDD 281
+PI +KKI + + P P D+ E + P DD L E +
Sbjct: 177 PEPISKKKKIIDTRMSSPPPPALDD---------------EDNFFPPADDDLLETADVPM 221
Query: 282 WDNSQQTQDVLPEQAKVELQIEA-IESQSIEEKVDVTNVESVSS-AVELSTSPPPQVVEK 339
D + + Q K +++ E + ++ ++VT+ ++++ +V L++ P + + K
Sbjct: 222 SDPAPSSPAAKVAQRKAQIKQEPKDDDDDYDDMMEVTHTGAIATTSVNLTSKRPIKKIIK 281
Query: 340 KEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPL--------ATDHENKKVFRMFFLDAFE 391
AE + S +P V S A L ++ E K + ++ DA E
Sbjct: 282 -----AEIDPTPASSSPVKPNVGSVNATSWNALTERLNVVSSSPAEAKSIGKIDHKDAIE 336
Query: 392 ----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK--- 438
D + G+++LFGKV K+ S+ SC V V NI RK+Y LPR ++
Sbjct: 337 EDGSLNFFWTDYTELNGSLFLFGKVLNKKTKSYVSCFVKVDNILRKLYFLPREHRMQDGE 396
Query: 439 -TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA 497
T + V + QVY E D + T+ + +K + +KYAF L VP ++Y+++ Y P
Sbjct: 397 ETGDEVEMMQVYDEIDTMMTKMNVGMYKIKACTRKYAFELRDVPKEAQYMKLLYPYSKPE 456
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEA--EKFPSRISWCKYEVQCN 555
+ + G+T+SHVFG+ +S E +L + I GP WL+ +A +K + S CK EV +
Sbjct: 457 IDPNRPGETYSHVFGSNTSLFEQFVLWKNIMGPCWLKIEDADFDKLKN-ASHCKLEVVAD 515
Query: 556 QMEKIRITNVCGNV 569
+ + + N+
Sbjct: 516 HPNMVSVLSESDNL 529
>gi|392575421|gb|EIW68554.1| hypothetical protein TREMEDRAFT_31892 [Tremella mesenterica DSM 1558]
Length = 1468
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 266/705 (37%), Positives = 399/705 (56%), Gaps = 55/705 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK-----EGEETGEA 615
++TN+ GN + TL GGR+ RNEF+LLH FH YV PDK + K + E EE A
Sbjct: 790 QLTNLAGNSWNLTLNGGRAVRNEFILLHEFHRLKYVCPDKTFKKTRTITMEDEDEEVPMA 849
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 675
+GK A Y+GGLV +PKKG +D +I++MDFNSLYPSIIQEYNI FTT+ + +
Sbjct: 850 KRGK----AKYAGGLVFDPKKGLWDTYILVMDFNSLYPSIIQEYNIDFTTVEREPVDEEG 905
Query: 676 ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+P ++ G+LP I LV R+QVKALMK N ++ L QYDIRQ+ALKLTA
Sbjct: 906 EEDKIPDVPGGEIPQGVLPRIIATLVGRRKQVKALMKDKNATAAQLQQYDIRQQALKLTA 965
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
NSMYGCLGF SRF ++PLAAL T KGREIL +T+ L E+L +V+YGDTDS+ ++ NV
Sbjct: 966 NSMYGCLGFQGSRFSSRPLAALTTYKGREILTHTRELAESLQLDVVYGDTDSVFVNSNVT 1025
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQE 855
Y KI N K N+ Y+ LE+D+D V++ +LLL KKKYAA+ I + + E
Sbjct: 1026 SYPEALKIANDFKKLVNERYRLLEIDLDAVFERILLLNKKKYAAVKIDASGDK----TTE 1081
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFV 915
+KG+D+ RR++++++ +A V+ +IL Q + + ++ IHE++ + + +G +
Sbjct: 1082 VKGLDMKRREFAKISKDASAAVLKEILSGQ-----ATEVVVEKIHEYLTSLGETVRSGGI 1136
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDGTS- 972
PL I K+L K PE+Y D+K+ PHVQVALR+ + ++ D I YI+C EDG S
Sbjct: 1137 PLEDFIIFKRLGKNPEDYPDKKSQPHVQVALRM-KSKGVAVRAHDVIPYIMCLGEDGKSA 1195
Query: 973 -EAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
A RA++ ++L + S+L+ID ++YL QI V RL E IEGTD R+AECLGLD
Sbjct: 1196 KSAHADRAFHPDDLRRQGSELRIDFDFYLDGQILQPVLRLCESIEGTDRARLAECLGLDP 1255
Query: 1031 SLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVE-----APTR 1085
+ Y + + + + +++ +++ C+ C V+ E +
Sbjct: 1256 TRYATHTGGEVTEKQFFTFESQISDKERFKDASPLSLRCIG--CHSVSNFEGLLDDSSNM 1313
Query: 1086 LSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
L G++ + I P P + ++ + ++ +YY G+ C+ GC T
Sbjct: 1314 LQPTGLICPVCSSIYPT---------PSISVQMENQIRAHVARYYLGYTICDGEGCGART 1364
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRV----YTELQLYQQLSFFHYICDITKALTKSDT-PSIK 1200
R +G+ R C K V Y++ +L+ QL +FH + + KAL SDT K
Sbjct: 1365 RM--MGVYGRRCLGLVKEGCKGVVRLEYSDQKLHDQLLYFHTLFNTDKAL--SDTRGGAK 1420
Query: 1201 FDS------ETYMGYCKMKQHVERFLESSAYNIVDLKKLFSCEEK 1239
++ + ++ + +R+L+ + VDLK LF E+
Sbjct: 1421 YEELRALLIPNLQAFNQITRVAQRYLDKNGRRFVDLKGLFGFMER 1465
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 144/557 (25%), Positives = 249/557 (44%), Gaps = 67/557 (12%)
Query: 53 DKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE-DDWIDDDGG 111
++ ++FAA +K + G+ + K D +Y+ VS+++Y V R E DD+I DD G
Sbjct: 4 NRADRFAALKKARKEGGRLSQWK---PGDGEIYDTVSDEQYRSIVGDRLEKDDFIVDDDG 60
Query: 112 DGYVEDG----------------REIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQ 155
+GYV++G +D E +K K K + ++ ++K +
Sbjct: 61 NGYVDNGVDDWEDEREEESSEDEDHFEGEDEELRKARKLKKAKARARAQKKSTSSKPKPK 120
Query: 156 KLLANM--PVKKK---KKEEVQLNNDDVLADLLSEVNTTIA----PTLKLNTK----TNE 202
L++ P++ + + DD +A LLS V + + P +T+ + +
Sbjct: 121 SALSDYARPIQSTSTYRPAPSAIAEDDFMASLLSSVTSVPSVPSQPAFLSDTRKRKSSPD 180
Query: 203 IVIPKEEPPAPTAKEYLANFSKP-------IKVEKKIEKPIKKEPSPLKDEIK-SNDSVM 254
I + + P+++E FSK ++ E ++ I + P E+ D M
Sbjct: 181 IPMYSSDGIEPSSEESF--FSKKRYGDSSDVEEEPRMTMTIGNKKKPRISEMTIVPDKDM 238
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKV---ELQIEAIESQSIE 311
E++M++ KEE + D D D + Q Q+K+ + + + S S++
Sbjct: 239 EMDMHMETVVKEERISD---------DEDEGIKVQSKPLAQSKINGNSTRRKMVNSTSVK 289
Query: 312 EKVDVTNVESVSSAVELSTSPPPQVVEKKE--HKCAEWEAIQTEPSTSEPQVHSRTAD-D 368
K ++ V V VE P V K+ W ++ + ++ + TA
Sbjct: 290 VKQEIPVVHGVGKEVETKEEETPSKVGLKKIIPGATHWSSLSETLAPKTQELETVTAPVG 349
Query: 369 SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKI 428
S+ E RMF+LD E Q G V+L GKV +++ + S CV V I R +
Sbjct: 350 SIKQENVLEEDGTLRMFWLDFIE----QDGVVHLVGKVLDRQSGKYVSACVSVNGIQRNL 405
Query: 429 YLLPRSEHL----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DL 483
++ PR + +T V+ VY +FD+ + + ++ ++ +++KYAF VP
Sbjct: 406 FVKPRPKRFSGGHETDLEVTKTDVYQDFDKARQKAGVEEWAAKFVQRKYAFEEKDVPKGE 465
Query: 484 SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS 543
SE+L+V Y P +P D G TFS VFGT +S E L+++RKI GP WLE
Sbjct: 466 SEWLKVVYGFDQPEMPMDCQGPTFSRVFGTNTSAFELLVIKRKIMGPCWLEIKGPVLSTK 525
Query: 544 RISWCKYEVQCNQMEKI 560
SWCK E + + +
Sbjct: 526 ATSWCKIEFHTSSPKNV 542
>gi|134112730|ref|XP_774908.1| hypothetical protein CNBF0730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257556|gb|EAL20261.1| hypothetical protein CNBF0730 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1494
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 285/709 (40%), Positives = 401/709 (56%), Gaps = 57/709 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK----EGEETGE-- 614
++TN+ GN + TL GGR+ RNEF+LLH FH YV PDK K K + +E E
Sbjct: 810 QLTNLAGNSWNLTLNGGRAVRNEFILLHEFHRLEYVCPDKAPYKAKTRPTGDDDEVTEDI 869
Query: 615 -ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
A KG+ R KA Y+GGLV EPK+G +DK+II+MDFNSLYPSIIQEYNI FTT+ +D
Sbjct: 870 IAMKGQ-RGKAKYAGGLVFEPKRGLWDKYIIIMDFNSLYPSIIQEYNIDFTTVE----RD 924
Query: 674 SDITTLCEYLPE---HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
D E +P+ V G+LP I LV RRQVKALMK + + L+QYDI+Q+A
Sbjct: 925 DDENAEEEKIPDVPSSDVPQGVLPRIIATLVNRRRQVKALMKDKSATPAKLLQYDIKQQA 984
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANSMYGCLGF SRF ++PLAAL T KGREIL +T+ L E+L +V+YGDTDS+ +
Sbjct: 985 LKLTANSMYGCLGFAGSRFSSRPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFV 1044
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ NV Y KI N+ K N+ YK LE+D+D V++ +LLL KKKYAA+ I +
Sbjct: 1045 NSNVTTYPEALKIANEFKKLVNERYKLLEIDLDAVFERILLLNKKKYAAVKIDEAGER-- 1102
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
S E+KG+D+ RR++S+++ +A ++ +IL + + + ++ IHE + K+ +
Sbjct: 1103 --STEVKGLDMKRREFSKVSKDASAAILKEILSGE-----ATEVVVEKIHELLTKLGEAV 1155
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED- 969
N +P+ I K+L K PE+Y D+K+ PHVQVALR+ + ++ D I YIIC D
Sbjct: 1156 RNNEIPIDDYIIFKRLGKNPEDYPDKKSQPHVQVALRMKQKGA-AVRAHDVIPYIICLDE 1214
Query: 970 ---GTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQI-HPVVTRLLEPIEGTDAVRIAE 1024
G A+ RA++ ++L + S+L+ID YYL QQI HP++ RL E IEGT+ R+AE
Sbjct: 1215 HGKGGKTASADRAFHPDDLRRQGSELRIDHEYYLDQQILHPIL-RLCETIEGTERARLAE 1273
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNT-VEAP 1083
CLGLD Y S Q+ E ++ +++ D C PSC + V
Sbjct: 1274 CLGLDPLRYTSTGTAEAQEKEFFTFDSQISDNDRFRDADPLNLVC--PSCSEETVFVGLQ 1331
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
T S + C N C++ + L +L + +I KYY GW+ C+ GC
Sbjct: 1332 TDASEVSNIRANGICCN-SCQL--VIHPASLQLQLENQIRSHISKYYLGWMTCDGEGCGL 1388
Query: 1144 LTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDT 1196
TR RC LG C + + YT+ +LY QL ++ + D+ K L +
Sbjct: 1389 RTRAMSVYGKRC-LGFIKENCWGTMRLE----YTDAKLYNQLLYYRSLFDVEKILN-AVR 1442
Query: 1197 PSIKFDSETYMGYCKMKQHVE------RFLESSAYNIVDLKKLFSCEEK 1239
S +FD + K E +L+ + VDLK LF E+
Sbjct: 1443 GSQRFDEIRPLTTANQKVLSELVAVTDMYLDKNGRRYVDLKGLFGFMER 1491
>gi|310798406|gb|EFQ33299.1| DNA polymerase [Glomerella graminicola M1.001]
Length = 1476
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 286/724 (39%), Positives = 413/724 (57%), Gaps = 63/724 (8%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ K
Sbjct: 770 ITALALQVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQTFK 828
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+ EE + ++G+G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFT
Sbjct: 829 GRMAQEENRD-DEGEGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFT 887
Query: 665 TIP-VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
T+ M QD D+ +P+ Q D GILP I LV R+QVK LMK + + + L
Sbjct: 888 TVDRSAMEQDEDVVP---EVPKDQ-DQGILPRLIATLVSRRKQVKGLMKDKSATPEQLAT 943
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYG 783
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ +VIYG
Sbjct: 944 WDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKDLAESNQLQVIYG 1003
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
DTDS+MI+ NV + FK+G + K N+ Y+ LE+DID V++ +LL KKKYAA+++
Sbjct: 1004 DTDSVMINANVENVSDAFKVGQEFKKAVNERYRLLEIDIDNVFRRILLQAKKKYAAINLV 1063
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ +GK I E+KG+D+ RR++ L+ E + S+IL+E D + + + IHE++
Sbjct: 1064 E-KDGKFIEKMEVKGLDMKRREYCGLSKE----ISSKILNEILSGDET-EKSIARIHEYL 1117
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTIS 963
++I + +P I QL KAP EY + ++P VQVALR K +++GD IS
Sbjct: 1118 REISGKMREQAIPAQKYIIFTQLGKAPTEYPNADSMPQVQVALR-EIAKGKNIRRGDVIS 1176
Query: 964 YIICEDG-TSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
YII D +S+ A +RAY ++ +K +S L DV +YL +QI P V RL I GT + +
Sbjct: 1177 YIITGDSQSSDPAPKRAYTPQDVMKADSGLSPDVEWYLGKQIFPPVERLCANIIGTSSSQ 1236
Query: 1022 IAECLGLDTSLYRSQIKESIQQSEENILGVGEAE-----EVKYQFCDKFEFTCMNPSCKQ 1076
+AECLGLD Y+S +++ Q N + + E +V++ C + C CK
Sbjct: 1237 LAECLGLDIRRYKS-VQDQHQGGSSNDVEIHPLESQVPDDVRFAECARLSLRCRK--CKA 1293
Query: 1077 VNTVEA----PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
+ E P R+S GV+ C C T ++ +L + +YYEG
Sbjct: 1294 SSVFEGLVAQPDRVSASGVL-----C--GACGAAISTL--SIVAQLEHALRTQTARYYEG 1344
Query: 1133 WLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHY 1183
WL C+D C TR RC P GL R C +Y+ YTE +Y QL ++
Sbjct: 1345 WLVCDDSACGMRTRQMNVYGTRCLGPKGL-ARDCLGRMRYE----YTEKAIYNQLVYYAS 1399
Query: 1184 ICDITKALTKSDTPS------------IKFDSETYMGYCKMKQHVERFLESSAYNIVDLK 1231
+ D+ KA +K+ S + + + +K V+++L+ V +
Sbjct: 1400 LWDVDKAKSKASAESGSDLSPENKDKILAMAEHNRVRFGTVKGVVDKYLDKCGRQWVAMD 1459
Query: 1232 KLFS 1235
LF+
Sbjct: 1460 TLFA 1463
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 159/594 (26%), Positives = 268/594 (45%), Gaps = 70/594 (11%)
Query: 51 KIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDD 109
KID+ +K A +L+ L+ G + YE E +YEEV E +Y + + R +DD++ DD
Sbjct: 3 KIDRRSKLA---ELRALRAAGKRANYEVEEVEELYEEVDENQYKKIIRDRLDQDDFVVDD 59
Query: 110 GGDGYVEDGREIFD-------DDIEDVPQKKEKHDKRKKNKNIQNPNAKGD-----IQKL 157
G+GY +DGRE +D D +++P K + K ++ +AK D I +
Sbjct: 60 NGEGYADDGREEWDRAPQYYSDSEDEMPMKGRGRPSKASKKQREDEDAKRDANDRDISEY 119
Query: 158 LANMPVKKKKKEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTN---EIVIPKEEPPA 212
K + K +V +D LADLL EV+ + + + K N E + PA
Sbjct: 120 FTKGAAKAQAKPKVVKTEEDDAFLADLLGEVDANVPAPISRSAKRNRSPERRRARVLSPA 179
Query: 213 PTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDG 272
P + +V K+ + + SP D+ ++D + M + P+
Sbjct: 180 PETRP---------RVTKRTKTVDDRLSSPTVDDSAADDGYLP-PMGDDRDNSPAPI--- 226
Query: 273 LWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA-VELSTS 331
+ + + D S V + V+ E E+ ++V + +V++A V L+ S
Sbjct: 227 AADDVPMSDPAPSSPAARVAQRKGLVKQDPNDDED---EDMIEVAHAGAVTAASVNLAGS 283
Query: 332 PPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHS-RTADDSLPLATDH--ENKKVFRMFFLD 388
P + + K + + +P+ + + T D L + T E + V +M + D
Sbjct: 284 RPTKKLVKPDPYPTPMSSSPVKPAAAAIDSSAWNTITDQLNVVTSSPAEARTVGKMDYKD 343
Query: 389 AFE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK 438
A E D + G++ LFGKV K+ + SC + + NI RK++ LPR ++
Sbjct: 344 AVEEDGSLNMFWTDYTEVNGSLCLFGKVLNKKTGLYVSCFIKIDNILRKLFFLPRQTKVQ 403
Query: 439 ----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAK 494
+ E V + VYSE D I T+ + +K + +KYAF LPG+P ++YL+ Y
Sbjct: 404 DGEDSGEEVELMDVYSEVDSIMTKMNVGMYKIKACTRKYAFELPGIPKEAQYLKCLYPYT 463
Query: 495 CPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEV 552
P + +G+TFSHVFGT ++ E +L + I GP WL+ +A+ F + S CK EV
Sbjct: 464 KPVIDGSTTGETFSHVFGTNTALFEQFVLWKNIMGPCWLKITDAD-FGALKNASHCKLEV 522
Query: 553 QCNQMEKIRITNVCGNVLS-----------RTLMGGRSERNEFLLLHA-FHEKS 594
+ N + L RT ++ + E L + A +EK+
Sbjct: 523 LVEHPNMVSTLNESSDNLDTPPLTLMSIALRTAFNAKANKQEILAISARIYEKA 576
>gi|297795609|ref|XP_002865689.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311524|gb|EFH41948.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1550
Score = 441 bits (1134), Expect = e-120, Method: Compositional matrix adjust.
Identities = 285/675 (42%), Positives = 396/675 (58%), Gaps = 84/675 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKK---------- 607
+++TN+ GN+ +TL GG ++RNE+ LLH FH K Y+LPDK Q+ K +K
Sbjct: 879 LQLTNISGNLWGKTLQGGSAQRNEYYLLHTFHSKKYILPDKISQHMKERKSSKRRINHGP 938
Query: 608 EGEETGEANKG-KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI 666
E + +KG K +K AY+GGLVLEPKKG YDK+++L+DF+SLYPSIIQEYNICFTTI
Sbjct: 939 EDHNVDDPSKGNKTKKGPAYAGGLVLEPKKGLYDKYVLLLDFSSLYPSIIQEYNICFTTI 998
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL-LMQYD 725
P +D LP Q GILP ++ LV R+ VK MK+ +DL + D
Sbjct: 999 PRS--EDG-----VPRLPSSQT-PGILPKLMEHLVSIRKCVKLKMKK---ETDLKCRELD 1047
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGD 784
IRQKALKLTANS+YG LGF NSRF+A+PLA L+T +GREIL T LV+N LN EVIYGD
Sbjct: 1048 IRQKALKLTANSLYGYLGFSNSRFYAKPLAELITLQGREILQRTVDLVQNHLNLEVIYGD 1107
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+MI ++D V IG ++ E NK Y+ L++++D +YK MLLL+KKKYAA+ + +
Sbjct: 1108 TDSIMIHSGLDDIKEVKAIGAKVIQEVNKKYRCLKIELDCIYKRMLLLRKKKYAAIKL-Q 1166
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+GK+ E KGVD+VRRDWS L+ E G +++IL S +D ++ IH +
Sbjct: 1167 FKDGKICEDIERKGVDMVRRDWSLLSKEIGDLCLAKIL-----YGGSCEDVVEAIHNELM 1221
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK-LKQGDTIS 963
KI+ ++ NG V L ITK L+K+PE Y D K+ PHVQVALR+ KK DT+
Sbjct: 1222 KIKEEMRNGQVALEKYVITKALSKSPEAYPDSKSQPHVQVALRMRQRGYKKGFSAKDTVP 1281
Query: 964 YIIC-EDGTSEAAT-----QRAYNIEELK-NNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
YIIC E G++ A+ +RA + +E+K ++++ +D++YYLSQQIH VV+RL I+G
Sbjct: 1282 YIICYEQGSTSLASSAGIAERARHPDEVKSDDNRWLVDIDYYLSQQIHLVVSRLCAEIQG 1341
Query: 1017 TDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ 1076
T R+AECLGLD S YRS+ N+ TC +PS
Sbjct: 1342 TSPERLAECLGLDPSKYRSR---------SNVT------------------TCSDPSTSL 1374
Query: 1077 V--NTVEAPTRLSTH---GVVFVLDECINPECKVPPYT--YLPHLI-NKLSQDMNKYIVK 1128
+ + E + T + ++ C P+C+ T P +I N++ + ++ ++
Sbjct: 1375 LCATSYEESNKSETEESDSIFWLKLRC--PKCEAEGSTRRISPAMIANQVKRQIDGFVSM 1432
Query: 1129 YYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-----KLHRVYTELQLYQQLSFF 1181
YY+ + C+D C TR L T C Y L R YTE LY+QLS+F
Sbjct: 1433 YYKDIMMCDDESCKYTTRSPNFRLLGDCERGTVCPNYPNCRGTLLRKYTEADLYRQLSYF 1492
Query: 1182 HYICDITKALTKSDT 1196
+I D +L K D
Sbjct: 1493 CHILDTQCSLEKMDV 1507
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 375 DHENKKVFRMFFLDAFEDIYKQP-GTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
D E + LDA E + GT+YL KV VK+ +++ SCCV+V NI R +Y +P
Sbjct: 414 DLEADGSLLFYILDACEKPFDASMGTIYLLRKVKVKKGDTYKSCCVVVNNIQRCVYAIPN 473
Query: 434 SEHLKTKEPVSIAQ----------------------VYSEFDQIATQYKILDFKSRKIEK 471
+ E +++ Q + E Q Q + ++ +++
Sbjct: 474 DSIFPSHELMTLEQEVKESRLSPESFRGKLHEMASKLKKEISQQLLQLNVSNYSMAIVKR 533
Query: 472 KYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGP 530
YAF+ P VP +Y L++ YS K P LP DL G++F V G+ +S LE +L+RKI GP
Sbjct: 534 NYAFDRPDVPTGQQYVLKINYSFKDPPLPEDLKGESFCTVLGSHTSALELFILKRKIMGP 593
Query: 531 SWLEFPEAEKFPSRISWCKYEVQCNQMEKIRIT 563
SWL+ R+SWCK EV + I ++
Sbjct: 594 SWLKISVFSPPSQRVSWCKCEVTVESPKVITVS 626
>gi|321259786|ref|XP_003194613.1| DNA polymerase alpha catalytic subunit [Cryptococcus gattii WM276]
gi|317461085|gb|ADV22826.1| DNA polymerase alpha catalytic subunit, putative [Cryptococcus gattii
WM276]
Length = 1484
Score = 441 bits (1134), Expect = e-120, Method: Compositional matrix adjust.
Identities = 285/715 (39%), Positives = 404/715 (56%), Gaps = 79/715 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK-------EGEETG 613
++TN+ GN + TL GGR+ RNEF+LLH FH YV PDK K K EG E
Sbjct: 810 QLTNLAGNSWNLTLNGGRAVRNEFILLHEFHRLEYVCPDKAPYKVKTRPTGDDDEGTEDI 869
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
A KG+ R KA Y+GGLV EPK+G +DK+II+MDFNSLYPSIIQEYNI FTT+ +D
Sbjct: 870 IAMKGQ-RGKAKYAGGLVFEPKRGLWDKYIIIMDFNSLYPSIIQEYNIDFTTVD----RD 924
Query: 674 SDITTLCEYLPE---HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
D E +P+ V G+LP I LV RRQVKALMK + S L+QYDI+Q+A
Sbjct: 925 EDENAEEEKIPDVPSSDVPQGVLPRIIATLVNRRRQVKALMKDKSSSPAKLLQYDIKQQA 984
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANSMYGCLGF SRF ++PLAAL T KGREIL +T+ L E+L +V+YGDTDS+ +
Sbjct: 985 LKLTANSMYGCLGFAGSRFSSRPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFV 1044
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ NV Y KI N+ K N+ YK LE+D+D V++ +LLL KKKYAA+ I +
Sbjct: 1045 NSNVTTYPEALKIANEFKKLVNERYKLLEIDLDAVFERILLLNKKKYAAVKIDEAGER-- 1102
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
S E+KG+D+ RR++S+++ +A V+ +IL + + + ++ IHE + K+ +
Sbjct: 1103 --STEVKGLDMKRREFSKVSKDASAAVLKEILSGE-----ATEVVVEKIHELLTKLGEAV 1155
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED- 969
N +P+ I K+L K PE+Y D+K+ PHVQVALR+ + ++ D I YIIC D
Sbjct: 1156 RNNDIPIDDYIIFKRLGKNPEDYPDKKSQPHVQVALRMKQKGA-TVRAHDVIPYIICLDE 1214
Query: 970 ---GTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQI-HPVVTRLLEPIEGTDAVRIAE 1024
G A+ RA++ ++L + S+L+ID YYL QQI HPV+ RL E IEGT+ R+AE
Sbjct: 1215 HGKGGRTASADRAFHPDDLRRQGSELRIDHEYYLDQQILHPVL-RLCETIEGTERARLAE 1273
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSC-KQVNTVEAP 1083
CLG + Q+ E ++ +++ D C PSC ++ V P
Sbjct: 1274 CLGTAEA----------QEKEFFTFDSQISDTDRFRDADPLNLIC--PSCNEEAAFVGLP 1321
Query: 1084 TRLS------THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCE 1137
+ S +G+V C + + + P + L N++ +I KYY GW+ C+
Sbjct: 1322 SDASVVSNIRANGIV-----CNSCQSVIHPASLQLQLENQI----RSHISKYYLGWMTCD 1372
Query: 1138 DPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
GC TR RC LG C + + YT+ QLY QL ++ + D+ K
Sbjct: 1373 GEGCGLRTRAMGVYGKRC-LGFIKENCWGTMRLE----YTDAQLYNQLLYYRSLFDVEKI 1427
Query: 1191 LTKSDTPSIKFD------SETYMGYCKMKQHVERFLESSAYNIVDLKKLFSCEEK 1239
L + S +FD + + ++ + +L+ + VDLK LF E+
Sbjct: 1428 LN-AVRGSQRFDEIRPLTTANQQVFSELVAVTDMYLDKNGRRYVDLKSLFGFMER 1481
Score = 120 bits (300), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 179/430 (41%), Gaps = 73/430 (16%)
Query: 173 LNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA--------KEYLAN--- 221
+ DD +A+LLS V T K++ + + AP++ K Y A+
Sbjct: 146 MQEDDFMANLLSSVTAASNETANRKRKSSPEIPSSDGYQAPSSDGSFFSSRKRYGADSDD 205
Query: 222 ----------FSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDD 271
K +V P + P ++ S D+ M+V+ E K E D
Sbjct: 206 EPVWDAKRGVMGKKPRVSDTTITPRRMSPGSNQENGYSLDNTMDVD---DEAVKPELADS 262
Query: 272 GLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
G E++Q+ + P A +L + S K V N SV + V+ ++
Sbjct: 263 GEDEEIQV---------RKARPLTATNKL------NGSTGAKRRVINSTSVKNIVKREST 307
Query: 332 PPPQVVEKKEHKCAE--------------------WEAIQTEPSTSEPQVHSRTADDSLP 371
P + K E + E W AIQ + S + P
Sbjct: 308 PITVITPKAEPEIEEVQSAKPRVNGKPKAKANAKHWSAIQESLAAFPSNQTSELDTVNAP 367
Query: 372 LATDH-----ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDR 426
+ + E R F+LD E Q G V+L GKV K+ + S CV+V I+R
Sbjct: 368 VGSTKPENVLEEDGSLRFFWLDHLE----QDGVVHLVGKVLDKQTGKYVSACVLVTGIER 423
Query: 427 KIYLLPRSEHL----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGV-P 481
+YL PR++ +T VS V EF+ +Q I ++ + +++KYAF V
Sbjct: 424 CLYLKPRAKRFVRGFETDLDVSEEDVLDEFESFRSQVGIDQYRCKFVKRKYAFEDKDVEK 483
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
S++LEV Y P +P D+SG TFSH+FGT ++ E ++ +KI GPSWLE +
Sbjct: 484 GESDWLEVVYGFDQPTIPMDVSGATFSHIFGTNTTPFELFVVNQKIMGPSWLEIKDIAPS 543
Query: 542 PSRISWCKYE 551
SWCK E
Sbjct: 544 EKASSWCKLE 553
>gi|297795441|ref|XP_002865605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311440|gb|EFH41864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1449
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 277/678 (40%), Positives = 389/678 (57%), Gaps = 82/678 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKKEGE------- 610
+++TN+ GN+ +TL G R++RNE+ LLH FH K ++LPDK Q+ K +K +
Sbjct: 768 LQLTNISGNLWGKTLQGARAQRNEYYLLHTFHSKKFILPDKIPQHRKERKASKRRINHGP 827
Query: 611 --------------ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSII 656
E + K +K AY+GGLVLEPKKG YDK+++L+DF+SLYPSII
Sbjct: 828 EDHSVDELDFDLALENDPSKGNKTKKGPAYAGGLVLEPKKGLYDKYVLLLDFSSLYPSII 887
Query: 657 QEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
QEYNICFTTIP + LP Q GILP ++ LV R+ V+ MK+
Sbjct: 888 QEYNICFTTIPRAEVG-------VPRLPSSQT-PGILPKLMEHLVGIRKCVRLKMKKE-- 937
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN- 775
+ + DIRQ+ALKL ANS+YG LGF NSRF+A+PLA L+T +GREILL T LV+N
Sbjct: 938 TGLKCRELDIRQEALKLAANSLYGYLGFSNSRFYAKPLAELITLQGREILLRTVDLVQNH 997
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
LN EVIYGDTDS+MI ++D + V IG + E NK Y+ L+++ D +YK MLLL+KK
Sbjct: 998 LNLEVIYGDTDSIMIHSGLDDIEEVKAIGAKAIQEVNKKYRFLKIECDAIYKRMLLLRKK 1057
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYAA+ + + +GK+ E KGVD+VRRDWS L+ E G +++IL S +D
Sbjct: 1058 KYAAIKL-QFKDGKICEDIERKGVDMVRRDWSLLSKEIGDLCLAKIL-----YGGSCEDV 1111
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
++ IH + KI ++ NG V + ITK LTK+PE Y D K+ PHVQVALR+ KK
Sbjct: 1112 VEAIHNELMKINEEMRNGQVAVEKYVITKALTKSPEAYPDSKSQPHVQVALRMRQRGYKK 1171
Query: 956 -LKQGDTISYIIC-EDGTSEAAT-----QRAYNIEELK-NNSKLKIDVNYYLSQQIHPVV 1007
DT+ YIIC E G + +A+ +RA + E+K ++S+ +D++YYL+QQIHPVV
Sbjct: 1172 GFSAKDTVPYIICYEQGNTSSASSAGIAERARHPAEVKSDDSRWLVDIDYYLAQQIHPVV 1231
Query: 1008 TRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEF 1067
+RL I+GT R+AECLGLD S YRS+ + L ++E
Sbjct: 1232 SRLCAEIKGTSPERLAECLGLDPSKYRSRSNVTTGSDPSTSLLFATSDE----------- 1280
Query: 1068 TCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLI-NKLSQDMNKYI 1126
+ T E+ + + ++ C+ E + P +I N++ + ++ ++
Sbjct: 1281 -----ESNKSKTAESDS------IFWLKLHCLKCEAEGSTRRISPAMIANQVKRQIDGFV 1329
Query: 1127 VKYYEGWLKCEDPGCSDLTRRCP----LGLKTRLCTTCHKY-----KLHRVYTELQLYQQ 1177
YY+G + C+D C T R P LG + R T C Y L R YTE LY Q
Sbjct: 1330 STYYKGIMMCDDESCK-YTTRSPNFRLLGDRER-GTVCPNYPNCNGTLLRKYTEADLYWQ 1387
Query: 1178 LSFFHYICDITKALTKSD 1195
LS+F +I D +L K D
Sbjct: 1388 LSYFCHILDTQCSLEKMD 1405
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 240/549 (43%), Gaps = 79/549 (14%)
Query: 45 GRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKY--EFTADENVYEEVSEKEYTERVLKRQE 102
GR +R + +++ A +LK + G ++ E ++ +++ V ++EY V +R+E
Sbjct: 10 GRKRRPGAEASSRKEALVRLKANRKGGRRNGGGCEIRLEKPIFDTVGDEEYQALVSRRRE 69
Query: 103 D--DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLAN 160
+ ++ +DG GYV++G E +D E D ++ + G +Q+
Sbjct: 70 EARGFVVEDGDLGYVDEGEE---EDWSKPSGGAESTDG-------ESDDGGGRLQRR--- 116
Query: 161 MPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLA 220
+K +K++V L+ A + E + T KT+++ E LA
Sbjct: 117 ---RKTEKKKVNLSLK-AAATITGEGRLSSMFTCSSFKKTDKVKCES------ILDEVLA 166
Query: 221 NFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQID 280
S ++ K K++P+ L N + +EM +D M+ +
Sbjct: 167 EVSPDDIDRERHHKRRKQQPATL------NKKNLGMEM----------LDSPSIVSMEKE 210
Query: 281 DWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKK 340
+ + QD P +E + + I + D V ++++ +++ P
Sbjct: 211 QATSGMEMQDS-PSIVSMEKEFQVIPPHD-SRQSDANEVFTLNALIDMEDKDPAFTA--- 265
Query: 341 EHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQP-GT 399
A W+ + T E V +A + D + + LDA+E+ + GT
Sbjct: 266 ---TAGWKEAMGKGGTYENVVPLASAVNECQTEFDLDAHGSLLFYILDAYEEPFGASMGT 322
Query: 400 VYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSE-------- 451
++LFGKV K +++ SCC +V+NI R +Y +P + E +++ Q E
Sbjct: 323 IHLFGKV--KMRDTYKSCCAVVKNIQRCVYAIPNDSIFPSHELMTLEQEVKESRLSPESF 380
Query: 452 ---FDQIATQYK-----------ILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCP 496
++A++ K + ++ +++ YAF+ P VP +Y L++ Y K P
Sbjct: 381 RGKLHEMASKLKKEISQQLLKLNVSNYSMALVKRNYAFDRPDVPAGEQYVLKINYPFKDP 440
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP--EAEKFPSRISWCKYEVQC 554
LP DL G++F V G+ +S LE +L+RKI GPSWL+ A R+SWCK+EV
Sbjct: 441 PLPEDLKGESFCAVLGSHTSALELFILKRKIMGPSWLKISIFSATSPSQRVSWCKFEVTV 500
Query: 555 NQMEKIRIT 563
+ I ++
Sbjct: 501 ESPKVITVS 509
>gi|336366791|gb|EGN95137.1| hypothetical protein SERLA73DRAFT_77147 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379492|gb|EGO20647.1| hypothetical protein SERLADRAFT_441989 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1546
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 274/711 (38%), Positives = 391/711 (54%), Gaps = 63/711 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-----------KEG 609
++TN+ GN ++TL GGR+ERNE++LLH FH+ Y+ PDK +GK +G
Sbjct: 863 QLTNLAGNAWNKTLNGGRAERNEYILLHEFHKLKYICPDKTFGKKALPPTKSDDPDDPDG 922
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
E KG K+ Y GGLV EPK+G +DK+I++MDFNSLYPSIIQEYNI FTT+
Sbjct: 923 EGGAGGGKGVKGKRDKYKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTTV--- 979
Query: 670 MLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQK 729
+ D + P +V G+LP I LV RRQVK+LMK ++S L+QYDI+Q+
Sbjct: 980 ---ERDESDDIPEPPPSEVAQGVLPRLIATLVSRRRQVKSLMKDKSVSHAKLLQYDIKQQ 1036
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLM 789
ALKLTANSMYGCLGF SRF+A+PLAAL T KGREIL +T+ L E+L +V+YGDTDS+
Sbjct: 1037 ALKLTANSMYGCLGFEYSRFYARPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVF 1096
Query: 790 ISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGK 849
++ NV + KI + K N YK LE+D+DG++ +LLL+KKKYAA+ + S
Sbjct: 1097 VNSNVTELSEALKISAEFKKAVNDRYKLLEIDLDGIFARLLLLQKKKYAAIKVEDGSR-- 1154
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
S E+KG+D+ RR++ L+ ++V+ QIL + + + ++ IHE++ + +
Sbjct: 1155 --TSTEVKGLDMKRREYCVLSKSVSQYVLDQILSGE-----ATETVVERIHEYLATVGEN 1207
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-- 967
+ G V L + K+L K PE+Y D K+ PHVQVA+R+ + GD I Y+ C
Sbjct: 1208 VRGGKVKLDDFIVYKRLGKNPEDYPDAKSQPHVQVAMRM-KAKGGSARSGDVIPYVFCIA 1266
Query: 968 --EDGTSEAATQRAYNIEELKNNS--KLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIA 1023
E+ A +RA + +E+K + ++ ID +YL+ Q+ P + RL EPIEGTD R+A
Sbjct: 1267 AGEESAKSAQAERAKHPDEIKKAAPGEMNIDYEHYLALQVLPPIERLCEPIEGTDKARLA 1326
Query: 1024 ECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQ-FCDKFEFTCMNPSCKQVNTVEA 1082
ECLGLD + +RS + Q G ++ + F D F SCK V A
Sbjct: 1327 ECLGLDPARFRSSLA---GQDVGMTFGTLDSRTSDSERFRDAIPFIVRCRSCKG-QIVFA 1382
Query: 1083 PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
P ++ + D I P CK T LI +L + K I +YYE W C+DP C
Sbjct: 1383 P--INDGSTLLRSDGPICPACKAIFGT--ASLIAQLEVQIRKCISRYYEFWTVCDDPTCG 1438
Query: 1143 DLTRRCPLGLKTRLCT----------------TCHKYKLHRVYTELQLYQQLSFFHYICD 1186
TR +G+ R C C K + Y + LY Q+ +F + D
Sbjct: 1439 ARTRG--MGVYGRRCLRRVEASETGGSGGVEERC-KGNVRIEYGDADLYDQMRYFASLFD 1495
Query: 1187 ITKALTKS--DTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+A+ + I S + M + VE++ + VDLK LFS
Sbjct: 1496 AERAVRGALDREKMITLTSHNVIFLQTMMETVEKYTDQCGRRWVDLKSLFS 1546
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 57/259 (22%)
Query: 349 AIQTEPSTSEPQVHSRT-----ADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLF 403
A+ E P + S + +DDS+ T E R F+LD E G ++
Sbjct: 332 AVAQEAEAFGPSITSNSKSQFKSDDSV-ARTVFEPDGSLRFFWLDCLE----HGGKLFFI 386
Query: 404 GKVFVKENNSHS---------SCCVIVQNIDRKIYLLPRSEHLKT----KEPVSI----- 445
GKV K ++S + S C+ V+N+ R +++LPR + EP+S
Sbjct: 387 GKVLDKSSSSSANPRGKGQWMSACITVENLQRNLFILPREYRVDAIPVDDEPLSSDDSES 446
Query: 446 -----------------------------AQVYSEFDQIATQYKILDFKSRKIEKKYAFN 476
+ VY +FD+I + + +K R +++ YAF+
Sbjct: 447 KGAATKKKGRPKNVENGMVMHATDVVPSQSDVYDDFDRIRRKCGVKSWKGRWVKRNYAFD 506
Query: 477 LPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP 536
VP ++++V Y P LPS+ + +FGT +S E +L+R+I GP WL
Sbjct: 507 ESKVPKEGDWMKVVYGFDDPPLPSNAQSPHIARIFGTNTSAFELFVLKRRIMGPCWLSIK 566
Query: 537 EAEKFPSRISWCKYEVQCN 555
A ISWCK E +
Sbjct: 567 NAVVEGKGISWCKLEASVS 585
>gi|358383606|gb|EHK21270.1| hypothetical protein TRIVIDRAFT_52153 [Trichoderma virens Gv29-8]
Length = 1471
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 285/722 (39%), Positives = 412/722 (57%), Gaps = 60/722 (8%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ K
Sbjct: 760 IAALAVSVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQTFK 818
Query: 605 NK-KEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
+ K EE E G G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICF
Sbjct: 819 GRQKAEEENAEEEGGDGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICF 878
Query: 664 TTIPVRMLQDSDITTLCE---YLPEHQV--DTGILPSEIKKLVESRRQVKALMKQPNLSS 718
TT+ D T E +PE V D GILP I LV RRQVK LMK +
Sbjct: 879 TTV--------DRTASAENEDAVPEVPVNQDQGILPRLIATLVSRRRQVKNLMKDKKATP 930
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNY 778
+ L +DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ +
Sbjct: 931 EELATWDIKQLALKLTANSMYGCLGYTRSRFYARPLAILTTHKGREILRSTKDLAESKSL 990
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
+VIYGDTDS+MI+ NV++ FK+GN+ K N+ Y+ LE+DID V++ +LL KKKYA
Sbjct: 991 QVIYGDTDSVMINANVDNVADAFKVGNEFKKAVNEQYRLLEIDIDNVFRRILLQAKKKYA 1050
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
A+++ + +GK I E+KG+D+ RR++ L+ E K ++ IL + ++ +
Sbjct: 1051 AINLIE-KDGKFIEKMEVKGLDMRRREYCALSKEVSKHLLDDIL-----SGDDIEVSVAR 1104
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
IHE+++ I T + + +P+ I QL K P+EY + ++P VQVALR + K +++
Sbjct: 1105 IHEYLRDIATKMRDFAIPVPKYTIYTQLGKGPKEYPNADSMPQVQVALR-DLARGKTIRK 1163
Query: 959 GDTISYIICEDG-TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
GD ISYI+ +SE A +RAY +LK + L+ DV++Y+++QI P V RL I GT
Sbjct: 1164 GDVISYIVTGTSQSSEPAPKRAYAPPDLKADPSLQPDVDWYIAKQIFPPVERLCANIAGT 1223
Query: 1018 DAVRIAECLGLDTSLYRS-QIKESIQQSEENI--LGVGEAEEVKYQFCDKFEFTCMNPSC 1074
++AE LGLD Y S Q ++S + I L +EV++ C + C C
Sbjct: 1224 STSQLAEQLGLDVRRYTSTQTQQSGTSDDLEIHPLESQIPDEVRFVDCKRLALRCRK--C 1281
Query: 1075 KQVNTVE----APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
K + E +P R++ GV+ C +P + ++ ++ + +YY
Sbjct: 1282 KATSAFEGLTSSPDRVTASGVI-----CPGCGAVIPTLS----VVAQVEHAVRLQTSRYY 1332
Query: 1131 EGWLKCEDPGCSDLTRR------CPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYI 1184
EGWL C+DP C + TR+ C +G K L C +H YTE +Y QL +F +
Sbjct: 1333 EGWLVCDDPQCGNRTRQMSVYGICCMGPKG-LARDCAG-NMHYEYTEKAIYNQLVYFASL 1390
Query: 1185 CDITKA----------LTKSDTPSIKFDSE-TYMGYCKMKQHVERFLESSAYNIVDLKKL 1233
D+ KA LT + I+ E + + +K V+++L+ V + L
Sbjct: 1391 WDVDKAKAKALDANNDLTGQEREKIRALVEHNRVRFTTVKAVVDKYLDKCGRQWVAMDTL 1450
Query: 1234 FS 1235
F+
Sbjct: 1451 FA 1452
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 152/546 (27%), Positives = 258/546 (47%), Gaps = 77/546 (14%)
Query: 51 KIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDD 109
K+D+ K A + L+ G+ Y+ +++Y+EV E Y + V R +DD++ DD
Sbjct: 3 KVDRRAKLAELKALRQ-AGKKAFESYQVEDADDLYDEVDEAGYKKIVRDRLNQDDFVVDD 61
Query: 110 GGDGYVEDGREIFD------DDIED-----VPQKKEKHDKRKKNKNIQNPNAKG-DIQKL 157
G+GY +DGRE +D D E V + K K+ + + + +A I +
Sbjct: 62 NGEGYADDGREDWDRVRRYESDSEGENELPVRGRPSKAAKKSREEELAKRDANDRSISEY 121
Query: 158 LANMPVKKKKKEEVQLN--NDDVLADLLSEVNTTI---AP-TLKLNTKTNEIVIPKEEPP 211
K + K +V +DD LADLL EV+ I AP K+ E ++ P
Sbjct: 122 FTKGAGKAQPKPKVTKTKADDDFLADLLGEVDANIPAPAPKASKVERSGGERRRARDLSP 181
Query: 212 APTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDD 271
AP ++ K +V+ ++ P EP+P + + ++A +EP+
Sbjct: 182 APEP-----SYKKQKRVDIRLPSP---EPAP---------PSFDDDDDLAPLIDDEPM-- 222
Query: 272 GLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS 331
+ M + D S V +A ++ + ++ + + E V+ S V ++ S
Sbjct: 223 -VTADMPMSDPAPSSPAAKVAQRKALIKQEPQSDDDDDMMEVAHAGAVKVAS--VNMAAS 279
Query: 332 PPPQVVEKKEHKCAEWEAIQTEP---------STSEPQVHSRTADDSLPLATDHENKKVF 382
P + + K+E A+ + P +TS ++ + + PL E++ +
Sbjct: 280 RPVKKIIKEE------PAVTSSPIKVPDTSVDATSWNELTEKLNVVNTPLL---ESRGIG 330
Query: 383 RMFFLDAFE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
++ DA E D + G++ LFGKV K+ S+ SC V + NI RK+Y LP
Sbjct: 331 KIDHNDAIESDGSLNFFWTDYTEVNGSLCLFGKVLNKKTQSYVSCFVKIDNILRKLYFLP 390
Query: 433 RSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
R + ++ T + V + VY+E D+I T+ + +K +K E+KYAF LP +P +EY++
Sbjct: 391 RQQRVRDGEETGDEVDMTDVYTEVDEIMTKMNVGMYKIKKCERKYAFELPEIPKEAEYMK 450
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RIS 546
+ Y PA+ D G+TFSHVFGT ++ E +L + I GP WL+ +A+ F + S
Sbjct: 451 LLYPYTKPAINMDAKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIQDAD-FGAIKNAS 509
Query: 547 WCKYEV 552
CK EV
Sbjct: 510 HCKLEV 515
>gi|328857126|gb|EGG06244.1| hypothetical protein MELLADRAFT_48531 [Melampsora larici-populina
98AG31]
Length = 1159
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 278/708 (39%), Positives = 409/708 (57%), Gaps = 52/708 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN + TL GGR++RNE++LLH FH + ++ PDK N ++ E +A K +
Sbjct: 462 QLTNLAGNSWNATLFGGRAQRNEYILLHEFHRQKFICPDK-LSFNDRKAIEKAQAIKSEN 520
Query: 621 --------RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
KK Y GGLV EPK+G +DKFI++MDFNSLYPSIIQEYNI FTTI L
Sbjct: 521 DGEDGKKNVKKDKYKGGLVFEPKRGLWDKFILVMDFNSLYPSIIQEYNIDFTTIDRTTLD 580
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
+ D + E LP GILP I LV RRQVK+LMK + + ++QY+I+Q ALK
Sbjct: 581 EDDPDAMPE-LPSSSTKQGILPRLIATLVNRRRQVKSLMKDRDTPPNKMIQYEIKQLALK 639
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
LTANSMYGCLGF SRF+A+ LAAL T KGREIL NT+ L E+ + +VIYGDTDS+MI+
Sbjct: 640 LTANSMYGCLGFEGSRFYARSLAALTTYKGREILTNTRELAESKDLDVIYGDTDSVMINT 699
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
N D+ + KIG + K N+ Y+ LE+DID V++ MLLL+KKKYAAL I +++ K
Sbjct: 700 NAIDFAAAKKIGGEFKKLVNERYRLLEIDIDAVFERMLLLQKKKYAALKIDEVTLQK--- 756
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
S E+KG+D+ RR++ +L+ +A ++++ +L + ++ +HE++ ++ D+
Sbjct: 757 SVEVKGLDMKRREFCKLSKDASQYILQHVLSGD-----PTEIVVEKMHEYLTQLGEDVKE 811
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDG 970
G L I K+L K P++Y D K+ PHVQVALR+ + S K GD I YI C +DG
Sbjct: 812 GRKDLEDFIIHKKLGKNPKDYPDAKSQPHVQVALRMESKGSSAAKAGDVIPYIFCLGDDG 871
Query: 971 TS---EAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
+S A +A + ++L +++S KID +YYLS Q+ P + RL EPIEGTD R+AECL
Sbjct: 872 SSSTRSAQADKARHPDDLRRSDSPWKIDYDYYLSLQVLPPIERLCEPIEGTDRSRLAECL 931
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSC--------KQVN 1078
GLD S +++ + ++ + +F D F SC Q +
Sbjct: 932 GLDPSRFKTHTSSNALDNDREFHTLDSQIPDSERFKDSQPFKLRCRSCHEESDFKGAQAD 991
Query: 1079 TVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCED 1138
TV +L G+ ++ C N CK Y+ + ++ +L + YI K+YE WL C+D
Sbjct: 992 TVCPFQKLGMIGISGII--CPNLVCK-QRYS-IGSMVAQLEIQIRGYINKFYEAWLVCDD 1047
Query: 1139 PGCSDLTRRCPLGLKTRLC---TTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL---- 1191
C + TR + + R C + K + YT+ LY Q+ ++ + D KA+
Sbjct: 1048 ASCRNRTRM--MSVYGRRCLNSSMACKGVMSYEYTDKMLYDQILYYQSLFDPDKAIERFK 1105
Query: 1192 --TKSDTPS--IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
KS+ + +K + +T +K V++ LE + V + LFS
Sbjct: 1106 GTDKSELTANILKVNKKT---LSILKTIVDKHLEWNGRRYVSMGSLFS 1150
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 18/209 (8%)
Query: 353 EPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENN 412
EP S V +R + AT E + + F+LD E G +YLFGKV K +
Sbjct: 7 EPRVSSGPVATRESGVEGNDAT--EKGENLKFFWLDYLE----VEGVIYLFGKVLNKLTS 60
Query: 413 SHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIA----QVYSEFDQIATQYKILDFKSRK 468
++ +CCVIV+ ++R +++LP+ E ++ ++ V + VY + + + +Y I +FK++
Sbjct: 61 TYVTCCVIVEGMERNLFVLPK-ETIRDEDDVEVKPTEDDVYDDIEDVLQKYGIAEFKAKV 119
Query: 469 IEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKI 527
+++KY F G+P E+ +V YS PA+P + TF V GT SS E LL+R+I
Sbjct: 120 VKRKYCFEEKGIPAGEHEWHKVVYSFSKPAIPLNTKSRTFGKVLGTHSSAFELFLLKRRI 179
Query: 528 KGPSWLE----FPEAEKFPSRISWCKYEV 552
GP WL P K P+ SWC+ EV
Sbjct: 180 MGPCWLNLKGALPNKSKTPA--SWCQLEV 206
>gi|390594500|gb|EIN03911.1| DNA polymerase alpha catalytic subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1473
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 275/701 (39%), Positives = 393/701 (56%), Gaps = 49/701 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE-------GEETG 613
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK +GK G++
Sbjct: 792 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKTWGKKAAAAVKAEAEGDDPN 851
Query: 614 EAN--KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-PVRM 670
A K+ Y GGLV EPK+G +DKFI++MDFNSLYPSIIQEYNI FTT+ PV
Sbjct: 852 GATVGGKGKGKRDKYKGGLVFEPKRGLWDKFILVMDFNSLYPSIIQEYNIDFTTVEPVE- 910
Query: 671 LQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
D D P+ G+LP I LV RRQVKALMK S LMQYDI+Q+A
Sbjct: 911 -DDEDGEERIPDPPDSTTAQGVLPRLIATLVNRRRQVKALMKDKTASQAKLMQYDIKQQA 969
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANSMYGCLGF SRF+A+PLAAL T KGREIL T+ L E+L +V+YGDTDS+ +
Sbjct: 970 LKLTANSMYGCLGFEYSRFYARPLAALTTFKGREILTATRELAESLQLDVVYGDTDSVFV 1029
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ D KI K N+ Y+ LE+D+DG+++ +LLL+KKKYAA+ K+ +G
Sbjct: 1030 NSGATDLAEALKIAADFKKAVNERYRLLEIDLDGIFQRLLLLQKKKYAAI---KVEDGTR 1086
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
S E+KG+D+ RR++ L+ ++V+ QIL + + + ++ IH+++ I ++
Sbjct: 1087 T-STEVKGLDMKRREYCALSKNVSQYVLEQILSGE-----ATEIVVEQIHDYLTTIGQNV 1140
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
G + L + K+L K PE+Y D K+ PHVQVALR+ T + GD I Y+ C
Sbjct: 1141 REGKIKLDDFIVFKRLGKNPEDYPDAKSQPHVQVALRM-KTRGGTARSGDVIPYVFCLGA 1199
Query: 971 TSEAA----TQRAYNIEELKNNSK-LKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAEC 1025
+ E++ +A + +E++ K +ID YYLSQQ+ P + RL EPIEGTD R+AEC
Sbjct: 1200 SGESSKTGQADKAKHPDEVRKGGKDCQIDYEYYLSQQVLPPIERLCEPIEGTDRARLAEC 1259
Query: 1026 LGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTR 1085
LGLD +R+ +Q+ L ++ +++ D F C C + AP
Sbjct: 1260 LGLDPGRFRTSTSGEVQEHVFTTLDSQMSDAERFKDTDPFVVRCRK--C-EGQIAFAPVA 1316
Query: 1086 LSTHGVVFVLD-ECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
T ++ EC P CK P T L +L + +I +YYEGW+ C D C
Sbjct: 1317 DRTASLLLPSGPEC--PACKAPMTT--ASLQVQLDTQIRAHIARYYEGWIVCNDQTCGMR 1372
Query: 1145 TRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICD---ITKALTKSDTPS 1198
TR + +T L CT+ ++ Y++ +LY QL +H + D I KA D
Sbjct: 1373 TRMMGVYARTCLRKDCTSTVAFE----YSDAELYNQLRMYHSLFDQQKIIKAARGMDKDK 1428
Query: 1199 I-KFDSETYMGYCKMK---QHVERFLESSAYNIVDLKKLFS 1235
+ + D+ M ++ VE+++ S VD+ LFS
Sbjct: 1429 LMEIDTLCTMQAGLLQTLLDTVEKYMLQSGRRWVDMSSLFS 1469
Score = 146 bits (369), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 251/552 (45%), Gaps = 49/552 (8%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENV-YEEVSEKEYTERVLKR-QED 103
R++R K +K AA+++ + +G F D+ V Y+EVSE++Y + V R +D
Sbjct: 3 RSRRANKSKLDKLAAYKRAR----EGGSRAIAFEEDDGVLYDEVSEEQYKQIVKGRLAKD 58
Query: 104 DWIDDDGGDGYVEDGREIFDDD-----IEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKL- 157
D++ DDG +GY+++G + + + ++ Q+K + + +K P+ K +
Sbjct: 59 DFVVDDGVEGYMDNGMDDWGNGGTDEEDDEEEQRKPRKSGKSSSKVADGPSKKAKPKAPP 118
Query: 158 --LANMPVKKKKKEEVQLNNDDVLADLLSEVNT--TIAPTLKLNTKTNEIVIPKEEPPAP 213
+ M + + +D ++ LL +++ T APT N K ++ PP
Sbjct: 119 PAVQPMSMAAYRPTVSADQENDFMSSLLGAMDSLPTEAPTKPRNKKRKSEMVRDNSPPRA 178
Query: 214 T----AKEYLANFSKPIKVEKK----IEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSK 265
+K+Y S E + P KK + S+D + + +S
Sbjct: 179 NGSYRSKQYAYADSSSDGPEPPSDDYVLSPKKKSRTHDYTNGISDDGMTPSMERMGVKSD 238
Query: 266 EEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA 325
E D G D+D T D + +A +E+ E ++ + +
Sbjct: 239 NEGTDGGF--SAGASDFD-VDATFDEIDMEAFMEVDEEELKPNVKKVVKKEEVELDLKKP 295
Query: 326 VE-LSTSPP---PQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHEN 378
++ L+ PP P +K++ W ++ T +EP ++ + +S E+
Sbjct: 296 LKPLNGVPPAHPPTNAKKEDDAKPSWLSVYDGLTVAPAAEPLGSTKMSSNSSNFEV-LED 354
Query: 379 KKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK 438
R F+LD E G +Y GK+ K + S CV ++N+ R +++LPR+ ++
Sbjct: 355 DGSLRFFWLDYME----HEGKLYFIGKLKEKTSGQWVSICVTIENLQRNLFVLPRALRVE 410
Query: 439 TKE---------PVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLE 488
E PV ++ VYS+FDQI Q I ++ + +++KYAF P VP D +E+L+
Sbjct: 411 QDEDGNLVETDVPVEMSDVYSDFDQIRQQAGIKSWRCKPVKRKYAFGEPDVPRDEAEWLK 470
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWC 548
V Y + P +PS +S FS +FGT ++ E L+L+RKI GP WL + ISWC
Sbjct: 471 VVYPFEEPTIPSTVSSPNFSRIFGTNTTAFELLVLKRKIMGPCWLNIKHPKVEHKGISWC 530
Query: 549 KYEVQCNQMEKI 560
K E + + I
Sbjct: 531 KVEATVSDPKDI 542
>gi|241953235|ref|XP_002419339.1| DNA polymeras I subunit A, putative; DNA polymerase alpha catalytic
subunit A, putative; catalytic subunit of the DNA
polymerase I alpha-primase complex, putative [Candida
dubliniensis CD36]
gi|223642679|emb|CAX42933.1| DNA polymeras I subunit A, putative [Candida dubliniensis CD36]
Length = 1531
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 263/661 (39%), Positives = 376/661 (56%), Gaps = 53/661 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--------YGKNKKEGEET 612
++TN+ GN S TL G R+ RNE++LLH F +Y++PDK+ Y + +
Sbjct: 824 QLTNIAGNAWSHTLSGTRAGRNEYILLHEFKRNNYIVPDKEDKTHKNTSYQQEARVENAE 883
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV-RML 671
+A KK Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+ R
Sbjct: 884 EDATTATSNKKPKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVNRDRFN 943
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
D LPE ++G+LP + LV RR+VK L+K P + QYDI+Q+AL
Sbjct: 944 VTHDENKDMPVLPERDTESGVLPRLLNTLVSRRREVKKLLKDPKNTPFQKAQYDIKQQAL 1003
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E+ + V+YGDTDS+MI
Sbjct: 1004 KLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESSSLRVVYGDTDSVMID 1063
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL--SISKLSNGK 849
N Y KIG Q K++ N+ Y+ LE+DID V+K +LL KKKYAA+ SI+K +N +
Sbjct: 1064 TGANSYKEAIKIGEQFKAQVNERYRLLEIDIDNVFKRLLLHAKKKYAAMNASINKATNEE 1123
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
+ E+KG+D+ RR++ QL+ + FV+++IL +D + L +++++ +++T
Sbjct: 1124 -TATLEVKGLDMRRREYCQLSKDISTFVLTKIL-----SDSDPETALLEVYDYLDEMKTK 1177
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-- 967
+ N +P+ +I +L+K P+ Y + K +P VQVALRL K +K G I+Y+I
Sbjct: 1178 VQNNEIPIDKYKINTKLSKDPKSYPNGKTMPQVQVALRLRE-EGKVIKAGSVITYVITAA 1236
Query: 968 -EDGTSEAATQRAYNIEEL--KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
+DG S +RA I+EL K + LK D NYYL +QI V RLLE IEG D VR+A
Sbjct: 1237 RDDGDSSTVAERARAIQELLSKKDPNLKPDANYYLEKQIFAPVERLLERIEGIDMVRVAT 1296
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTC-----MNPSCKQVNT 1079
LG+DT Y ++K S E GE ++ D+ F ++ C
Sbjct: 1297 SLGIDTKRYILRVKNS-----EGGGANGEILPIESNISDEERFRATSYLVLHCKCGTSFR 1351
Query: 1080 VEAPTRLSTHGVVFVLDECINPECKVPPYTYLP-HLINKLSQDMNKYIVKYYEGWLKCED 1138
T+ V F C +C YT+ L ++L + K+I YY GWL C+D
Sbjct: 1352 FGGIMAAETYKVTFNGVCC--SQCN---YTFPAIKLTSQLESMIRKHIALYYAGWLVCDD 1406
Query: 1139 PGCSDLTR-------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
P C +TR RC +G R C +Y+ Y + QLY QL +F I D+ K
Sbjct: 1407 PACGIVTRQISVYGKRC-IGNSGRAMDCKGVMRYR----YNDKQLYNQLLYFQSIFDVEK 1461
Query: 1190 A 1190
Sbjct: 1462 T 1462
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 138/528 (26%), Positives = 236/528 (44%), Gaps = 53/528 (10%)
Query: 60 AFQKLKDLK--GQGVKHKYEFTADEN-VYEEVSEKEYTERVLKRQE---DDWIDDDGGDG 113
Q+LK+ + G+ V T D N +Y+EV E Y R KR + DD+I DD G+G
Sbjct: 70 TLQQLKEARRTGRNVNVIESDTDDYNEIYDEVDEDTY--RQHKRNQLMNDDFIVDDNGEG 127
Query: 114 YVEDGREIFDDD-----IEDVPQKKEKHDKRKKNKNIQNPNAK-GDIQKLLANMPVKKKK 167
YV++G + +DD D + KR+K ++ + AK I+ M
Sbjct: 128 YVDNGADDWDDASRPNYYSDEENESMGSRKRRKKEDKTSKVAKTSQIRNFFKPMSGISDS 187
Query: 168 KEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIK 227
K++++ N DD+L D +++ + TN+ V + + NFS K
Sbjct: 188 KKKLETNIDDILNDFGDDLDRKKHIPKAFSHSTNKEVNNNKINKKKLKNTF--NFSTSTK 245
Query: 228 VEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQ 287
+ I P L S+D M+++ +++P + + D ++
Sbjct: 246 -KTDITTP------KLDAFNASSDYTMDIDT-----FEDQPSSPFKLKSEVTPEADTGKE 293
Query: 288 TQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEW 347
D P + +E E ++Q EK +V N + + S P VV+K +
Sbjct: 294 NIDPEPTKNILEDPPELPKNQ---EKANV-NDDDSDDDIVYSRKPRAAVVKKNQVDTVSA 349
Query: 348 EAIQTEPS--TSEPQVHSRTADDSLPLATDH--ENKKVFRMFFLDAFEDIYKQPGTVYLF 403
PS TS+P V+++ ++ + ++ D+ + F+MF+ D E ++ LF
Sbjct: 350 VKANQLPSSPTSKP-VYTKFSNHTEKVSEDNIKDTSDSFKMFWFDYAE----VENSLLLF 404
Query: 404 GKVFVKENNSHSSCCVIVQNIDRKIYLLPR------SEHLKTKEPVSIAQVYSEFDQIAT 457
GK+ KE S V V I R+++ LPR E KTK+ +I + +
Sbjct: 405 GKIMTKEGKLVSGV-VKVDGICRELFFLPREYRIVDDEEDKTKKLAAIDVLEEIQPLLLA 463
Query: 458 QYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV----RYSAKCPALPSDLSGDTFSHVFGT 513
YK+ + +++ KKYAF L +P +EYL+V +P+++ G TF HVFGT
Sbjct: 464 NYKLEELRAKPEVKKYAFELADIPKEAEYLKVLLPFNNETNRNIMPANIEGSTFRHVFGT 523
Query: 514 KSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQMEKI 560
++ E+ +++R I GP WLE + +S C+ EV N+ +I
Sbjct: 524 NANMFESFVMQRNIMGPCWLEIRGGDFDAMQNVSHCQVEVVVNRPSQI 571
>gi|405121124|gb|AFR95893.1| DNA polymerase alpha catalytic subunit [Cryptococcus neoformans var.
grubii H99]
Length = 1456
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 274/655 (41%), Positives = 379/655 (57%), Gaps = 64/655 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK----EGEETGE-- 614
++TN+ GN + TL GGR+ RNEF+LLH FH YV PDK K K + +E E
Sbjct: 764 QLTNLAGNSWNLTLNGGRAVRNEFILLHEFHRLEYVCPDKAPYKVKTRPTGDDDEVTEDI 823
Query: 615 -ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
A KG+ R KA Y+GGLV EPK+G +DK+II+MDFNSLYPSIIQEYNI FTT+ +D
Sbjct: 824 IAMKGQ-RGKAKYAGGLVFEPKRGLWDKYIIIMDFNSLYPSIIQEYNIDFTTVD----RD 878
Query: 674 SDITTLCEYLPE---HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
D E +P+ V G+LP I LV RRQVK LMK + + L+QYDI+Q+A
Sbjct: 879 EDENPEEEKIPDVPSSDVPQGVLPRIIATLVNRRRQVKTLMKDKSATPAKLLQYDIKQQA 938
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANSMYGCLGF SRF ++PLAAL T KGREIL +T+ L E+L +V+YGDTDS+ +
Sbjct: 939 LKLTANSMYGCLGFAGSRFSSRPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFV 998
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ NV Y KI N+ K N+ YK LE+D+D V++ +LLL KKKYAA+ I +
Sbjct: 999 NSNVTTYPEALKIANEFKRLVNERYKLLEIDLDAVFERILLLNKKKYAAVKIDEAGER-- 1056
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
S E+KG+D+ RR++S+++ +A V+ +IL + + + ++ IHE + K+ +
Sbjct: 1057 --STEVKGLDMKRREFSKVSKDASAAVLKEILSGE-----ATEVVVEKIHELLTKLGEAV 1109
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED- 969
N +P+ I K+L K PE+Y D+K+ PHVQVALR+ + ++ D I YIIC D
Sbjct: 1110 RNSEIPIDDYIIFKRLGKNPEDYPDKKSQPHVQVALRMKQKGA-TVRAHDVIPYIICLDE 1168
Query: 970 ---GTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQI-HPVVTRLLEPIEGTDAVRIAE 1024
G A+ RA++ ++L + S+LKID YYL QQI HP++ RL E IEGT+ R+AE
Sbjct: 1169 HGKGGKTASADRAFHPDDLRRQGSELKIDHEYYLDQQILHPIL-RLCETIEGTERARLAE 1227
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNT-VEAP 1083
CLGLD Y S Q+ E ++ +++ D C PSCK+ V P
Sbjct: 1228 CLGLDPLRYTSAGTAEAQEKEFFTFDSQISDNDRFRDADPLNLIC--PSCKEETVFVGLP 1285
Query: 1084 TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
+ S V I+P L +L + +I KYY GW+ C+ GC
Sbjct: 1286 SDASEVSV-------IHPAS----------LQLQLENQIRSHISKYYLGWMTCDGEGCGL 1328
Query: 1144 LTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL 1191
TR RC LG C + + YT+ +LY QL ++ + D+ K L
Sbjct: 1329 RTRAMSVYGKRC-LGFIKENCWGTMRLE----YTDAKLYNQLLYYRSLFDVEKIL 1378
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 122/266 (45%), Gaps = 34/266 (12%)
Query: 316 VTNVESVSSAVELSTSPPPQVVEKKEHKCAE--------------------WEAIQTEPS 355
V N SV + ++ SP P + K + E W AIQ +
Sbjct: 246 VINSTSVKNVIKREPSPAPVIAPKAAPEIEEIQSVMPHVNGKPKAKANAKHWSAIQESLA 305
Query: 356 TSEPQVHSRTADDSLPLATDHENKKV-----FRMFFLDAFEDIYKQPGTVYLFGKVFVKE 410
S S S P+ + K + R F+LD E Q G V+L GKV K+
Sbjct: 306 ASSSNQTSELDTVSAPVGSTKPEKVMEKDGSLRFFWLDHLE----QDGIVHLVGKVLDKQ 361
Query: 411 NNSHSSCCVIVQNIDRKIYLLPRSEHL----KTKEPVSIAQVYSEFDQIATQYKILDFKS 466
+ S CV V I+R +Y+ PR++ +T VS V EF+ +Q I ++
Sbjct: 362 TGKYVSACVSVTGIERCLYVKPRAKRFARGFETDLDVSEEDVLDEFENFRSQVGIDQYRC 421
Query: 467 RKIEKKYAFNLPGV-PDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLER 525
+ +++KYAF V S++LEV Y PA+P D SG TFSH+FGT ++ E ++ +
Sbjct: 422 KFVKRKYAFEDKDVEKGESDWLEVVYGFDQPAIPMDSSGATFSHIFGTNTTPFELFVVNQ 481
Query: 526 KIKGPSWLEFPEAEKFPSRISWCKYE 551
KI GPSWLE + SWCK E
Sbjct: 482 KIMGPSWLEIKDIAPVEKASSWCKLE 507
>gi|121715516|ref|XP_001275367.1| DNA polymerase alpha catalytic subunit, putative [Aspergillus
clavatus NRRL 1]
gi|119403524|gb|EAW13941.1| DNA polymerase alpha catalytic subunit, putative [Aspergillus
clavatus NRRL 1]
Length = 1461
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 268/702 (38%), Positives = 403/702 (57%), Gaps = 50/702 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK---EGEETGEANKG 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K +K + ++ E +
Sbjct: 776 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSKLQKVEEKNQDGEEDDAA 835
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 836 DKKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVDRTATAENENEE 895
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + D L +D +Q A KLTANSM
Sbjct: 896 KVPEVPSSDQEQGILPRLIATLVGRRREVKKLMKDKRATPDQLALWDTKQLAFKLTANSM 955
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 956 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTIS 1015
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1016 DALKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAVNMTEV-DGKYVDKLEVKG 1074
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L S D L L +H+++K++ + +P+
Sbjct: 1075 LDMKRREYCALSKEVSQRLLNEVL---SGEDQEL--VLNRVHDYLKELADKMRAYQIPVQ 1129
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE---DGTSEAA 975
I +L+K PEEY +++++P QVALR K ++ D ISYI+ + +S A
Sbjct: 1130 KYVIYTKLSKRPEEYPNKESMPPAQVALR-ELARGKTIRPNDVISYIVTNGDAETSSLAP 1188
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y +++ +K S LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1189 AKRSYTLQDVMKPESGLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQ 1248
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVE---APTRLST- 1088
+ Q I + + V+++ + TC CK+ + E A T + T
Sbjct: 1249 INTSSTSNQQNAEIFPLESQIPDSVRFENAARLTLTCR--FCKEKSIFEGLVASTHMCTA 1306
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-- 1146
+G++ C N C+ P+T L ++ +L + KYYEGWL C+D C + TR
Sbjct: 1307 NGII-----CPNQACQ-KPFTVL-TIVAQLESQIRAQTSKYYEGWLVCDDSACGNRTRQM 1359
Query: 1147 -----RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
RC LG + R C Y+ YTE Q+Y QL +F + D+ KA + + S
Sbjct: 1360 SVYGHRC-LGPRGRAEGCLGRMSYE----YTEKQMYNQLLYFAGLWDVDKAKSNAQRESG 1414
Query: 1200 -KFDSETYM------GYCKMKQHVERFLESSAYNIVDLKKLF 1234
K DS + + +K V+ +L+ V++ LF
Sbjct: 1415 EKKDSIAALVEFNRTRFGTVKDVVDSYLKKCGRQWVEMDSLF 1456
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 155/560 (27%), Positives = 254/560 (45%), Gaps = 91/560 (16%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A ++L+ L+ G K YE +++YEEV ++ Y + + R +DD++ DD G+GY
Sbjct: 6 AKLEELRALRAAGKKRLSTYEIEEQDDIYEEVDDEGYKKIIRNRLDQDDFVVDDNGEGYA 65
Query: 116 EDGREIFDD---------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK- 165
+DGRE++++ D +++P + + ++++ + + I K + P
Sbjct: 66 DDGREVWNEATAEYNSESDDDELPARSKAAKRKREEEKQRKEKINNGISKYFNSGPAASA 125
Query: 166 -KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K K +D +ADLL EV+T N +N I P + + + S
Sbjct: 126 PKPKPVATAEDDAFMADLLGEVDT--------NVVSNHI--PTKNVIKSETRRKVRILSP 175
Query: 225 PIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEE-PVDDGLWEQMQIDDWD 283
P+ ++ I D E VA+QS + DDG M DD
Sbjct: 176 PLSSRQR------------SGRISRKDENSEPVSPVAQQSDLDFDNDDGPLPSMDDDDVH 223
Query: 284 NSQQTQDVLPE-------QAKVELQIEAIESQS----IEEKVDVTNV-ESVSSAVELSTS 331
S D +P + K + I+ ES I E VT E+ +++V ++ S
Sbjct: 224 MS----DPMPSSPVSKAVERKSAINIKKEESDGEDNDIMEVAQVTGQHEAKTASVNMAGS 279
Query: 332 PPPQVVEKKEHKC---------------AEWEAIQTEPST-SEPQVHSRT-----ADDSL 370
PP ++K+ + A W ++++ + S P +RT A+D +
Sbjct: 280 RPPPKIKKENYSTPANSSPAKAPVDILDASWNDVRSKLNVLSSPASETRTFGKLHAEDVV 339
Query: 371 PLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYL 430
E R F++D E G++ LFGKV K +S++S V V I RK++
Sbjct: 340 ------EEDGSLRFFWIDYTE----VNGSLCLFGKVKNKRTDSYASAFVKVDQILRKLFF 389
Query: 431 LPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY 486
LPR K T E V + VY E D + ++ ++ K + +KYAF +P +P +EY
Sbjct: 390 LPREHRHKHGRETDEEVDMKDVYEEVDALMSRLRVGMHKIKPATRKYAFEMPNIPKETEY 449
Query: 487 LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRI 545
L++ Y P LP D G+TFSHVFGT +S E +L + I GP WL+ +A+ +
Sbjct: 450 LKLLYPYDKPVLPMDTKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIEDADFSAVNNA 509
Query: 546 SWCKYEVQCNQMEKIRITNV 565
SWCK+E C + + IT V
Sbjct: 510 SWCKFE--CQVTKPVSITPV 527
>gi|336469269|gb|EGO57431.1| hypothetical protein NEUTE1DRAFT_146042 [Neurospora tetrasperma FGSC
2508]
gi|350291097|gb|EGZ72311.1| hypothetical protein NEUTE2DRAFT_90453 [Neurospora tetrasperma FGSC
2509]
Length = 1479
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 284/712 (39%), Positives = 404/712 (56%), Gaps = 61/712 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQY--GKNKKEGEETGEANKGK 619
+TN+ GN +RTL G R+ERNE++LLH FH YV+PDKQ G+ + E E E
Sbjct: 784 LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYVVPDKQTFKGRQRIEEENAEEEGGEG 843
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ L + D
Sbjct: 844 GKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVDRTSLSEDD--DA 901
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P+ Q GILP I LV RRQVK+LMK N + + L +DI+Q ALKLTANSMY
Sbjct: 902 VPEVPKEQAQ-GILPKLIATLVSRRRQVKSLMKDKNATPEELATWDIKQLALKLTANSMY 960
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYGDTDS+MI+ N ++
Sbjct: 961 GCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESNSLQVIYGDTDSVMINANKDNVAE 1020
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
++G++ K N+ Y+ LE+DID V++ +LL KKKYAA+++ ++ NGK + E+KG+
Sbjct: 1021 ALRVGHEFKKAVNERYRLLEIDIDNVFRRILLQAKKKYAAINMVEV-NGKWVEKMEVKGL 1079
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVP 916
D+ RR++ L+ E ++++IL S DD +Q IHE+++ I + +G VP
Sbjct: 1080 DMKRREYCGLSKEISNRILTEIL--------SGDDTEVSVQRIHEYLRDISAKMRDGAVP 1131
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG--TSEA 974
+ I+ QL KAP++Y + ++P VQVALR K +++GD ISYII D TSEA
Sbjct: 1132 VQKYIISTQLGKAPKDYPNADSMPQVQVALR-ELAKGKTIRKGDVISYIITGDSKTTSEA 1190
Query: 975 ATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+RAY ++ LK S L DV +Y+ +QI P V RL I GT ++AE LGLD Y
Sbjct: 1191 VAKRAYTPQDVLKAESGLSPDVEWYIGKQIFPPVERLCANIVGTSTSQLAENLGLDVRRY 1250
Query: 1034 RSQIKESI---QQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA-PTRLSTH 1089
S + Q E + L + +++Q C + C CK ++ E + S +
Sbjct: 1251 SSNTNNNSSGPQDLEIHPLESQIPDSLRFQSCARLSLRCRK--CKTSHSFEGLASPSSIN 1308
Query: 1090 GVVFVLDECINPECKVPPYTYLPHL--INKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
V +C P C+ LP L + ++ + +YYEGWL C+D C + TR
Sbjct: 1309 NVTPSGIQC--PSCQY----VLPTLSVVAQVEAAVRAQTARYYEGWLVCDDSSCGNRTRQ 1362
Query: 1147 ------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS------ 1194
RC LG K C ++ YTE +Y QL +F + D+ KA +K+
Sbjct: 1363 ISVYGTRC-LGSKGLARGECGG-RMRYEYTERDIYNQLVYFASLWDVDKAKSKAKENNDE 1420
Query: 1195 DTPSIKFDSETYMGYCKMKQH-----------VERFLESSAYNIVDLKKLFS 1235
D + K +E M +H VE++L+ V + LF+
Sbjct: 1421 DADAAKLSAEERERVAIMAEHNRVRFGTVKGVVEKYLDKCGRRWVAMDTLFA 1472
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 247/544 (45%), Gaps = 66/544 (12%)
Query: 50 QKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDD 108
+++ K +K+A +L++L+ G K Y+ + +YEEV E +Y + V R EDD++ D
Sbjct: 3 RRVAKRDKYA---ELRELRQSGKKKTYDVGEIDELYEEVDENQYKKIVRDRLNEDDFVVD 59
Query: 109 DGGDGYVEDGREIFD------DDIED---VPQKKEKHDKRKKNKNIQNPNAKG-DIQKLL 158
D G+GY +DGRE +D D E+ +P K + K++K + +A +I +
Sbjct: 60 DNGEGYADDGREEWDRLPQYHSDSEEELGLPGSKPRKSKKQKEQEDAKRDANDRNITEYF 119
Query: 159 ANMPVKKKKKEEVQLNNDD--VLADLLSEVNTTI-APTLKLNTKTNE--------IVIPK 207
VK K++V +D L DL+ +V I P +++ K + ++ P
Sbjct: 120 TKGAVKAPPKQKVIKTEEDEKFLDDLIDQVTAQIPVPATRVSKKRDRSVERRKVRVLSPV 179
Query: 208 EEPPAPTAKEYLA---NFSKPI-----KVEKKIEKPIKKEPSPLKDEIKSNDSVMEVE-- 257
EP P AK S P + + EP+P+ D + S D++M
Sbjct: 180 REPRPPMAKRAKTVDDRASSPAGDDDLLPDDDYLPAMDDEPAPVSDYLMS-DAIMPSSPA 238
Query: 258 MNVAEQ---SKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
VA + + EP + DD D + +V A + S+ I++
Sbjct: 239 AKVATRRTFGRPEP-------KKNEDDEDEDEDMMEVAHTGAVTAASVNISASRQIKK-- 289
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAI-QTEPSTSEPQVHSRTADDSLPLA 373
+ E V ++ + +P P+V A W I Q S Q R+ +
Sbjct: 290 -ILKTEPVPASSSPARAPAPEV------DAASWNEINQKLNVVSMSQSEGRSVG-KIDYK 341
Query: 374 TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
E MF+ D E G++ LFGKV K+ ++ SC V V NI RK++ LPR
Sbjct: 342 DAIEEDGSLNMFWTDYTE----VNGSLCLFGKVLNKKTKTYVSCFVKVDNILRKLFFLPR 397
Query: 434 SEHLKTKEPVSIAQ----VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ E + VY+E D+I T+ + K + +KYAF LP VP S+YL++
Sbjct: 398 KYRVRGGEETTEEVEMMDVYNEVDEIMTKMNVGMHKIKACTRKYAFELPDVPKESQYLKL 457
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWC 548
Y PA+ G+TFSHVFGT ++ E +L + I GP WL+ +A+ R S C
Sbjct: 458 FYPYTKPAMEPTHKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTSLRNASHC 517
Query: 549 KYEV 552
K EV
Sbjct: 518 KLEV 521
>gi|453082971|gb|EMF11017.1| DNA polymerase alpha catalytic subunit [Mycosphaerella populorum
SO2202]
Length = 1468
Score = 438 bits (1126), Expect = e-119, Method: Compositional matrix adjust.
Identities = 278/720 (38%), Positives = 404/720 (56%), Gaps = 69/720 (9%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK---NKKEGEETGEANKG 618
+TN+ GN +RTL G RSERNE++LLH F+ Y+ PDK YGK NK+ E
Sbjct: 768 LTNLAGNSWARTLSGTRSERNEYILLHEFYRNKYICPDKIYGKGPSNKRIEEAEEGEEGA 827
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YDKFI++MDFNSLYPSIIQEYNICFTT+ SDI+
Sbjct: 828 DSKKKDKYKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEYNICFTTV-----DRSDISE 882
Query: 679 LCEYLPEHQVDT---GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
E +P+ DT GILP I+ LV RR+VK LMK + + D+L +D++Q ALKLTA
Sbjct: 883 QDERVPDVPEDTSNKGILPRLIRTLVSRRREVKKLMKDKSATEDMLKTWDVKQMALKLTA 942
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN-YEVIYGDTDSLMISCNV 794
NSMYGCLG+ SRF+A+PLAAL T+KGREIL +TK+L E+ + VIYGDTDS+MI+ NV
Sbjct: 943 NSMYGCLGYTKSRFYARPLAALTTSKGREILQSTKNLAESQHALRVIYGDTDSVMINTNV 1002
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
++ K+G + N+ Y+ LE++ID +++ +LL KKKYAA+ + +
Sbjct: 1003 DNILDALKMGKDFQRSVNEQYELLEIEIDHIFRRLLLHAKKKYAAIQMIDAGDNTWKEKL 1062
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
++KG+D+ RR++ QL+ + +++ +L + + + IH+H++ + + N
Sbjct: 1063 DVKGLDMRRREYCQLSKDTSTQLLNYLLSGE-----EPEKVVSQIHDHLRSLSEKMRNNE 1117
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED--GTS 972
+P I QL K P++Y + +++P VQVAL+ K++K D ++++IC D G
Sbjct: 1118 IPAHKYTIYTQLGKDPKDYPNGRSMPSVQVALK-RLAKGKQVKAKDVMAFVICGDSEGNQ 1176
Query: 973 EAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
E A Q AY ++ L NS+L DV YYL +QI P V RL PI GTD R+AECLGLDT+
Sbjct: 1177 EKAAQNAYELDAVLAKNSELTPDVQYYLHKQILPPVERLCAPISGTDISRLAECLGLDTT 1236
Query: 1032 LYR-SQIKESIQQSEE-NILGVGEAEEVKYQFCDKFEFTCMNPSCKQ------VNTV--- 1080
YR S +S +QS E L + ++++ C+ C+ CK +N +
Sbjct: 1237 KYRISGASKSTEQSNEITTLESQIPDHLRFKDCEPLGLLCL--GCKNHFEYRGLNYMPPD 1294
Query: 1081 -EAP----TRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLK 1135
EAP L+ G+ C ECK T + +L + ++ +YY WLK
Sbjct: 1295 GEAPLVPLGVLTNDGLA-----CPRAECKKRISTLT--MTTQLETQIRRHTSRYYSAWLK 1347
Query: 1136 CEDPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDIT 1188
C+D C TR RC LG + L C ++ Y+E LY QL + + D+
Sbjct: 1348 CDDQACGLRTRQISVYGHRC-LGPQG-LAYGCAG-RMSFEYSEKALYNQLLYLQGLFDVD 1404
Query: 1189 KALTKSDTPS--IKFDSET------YMGYCKMK-----QHVERFLESSAYNIVDLKKLFS 1235
K+L K S +K D E+ G + + V+ +L+ S + V + LF
Sbjct: 1405 KSLEKMSAASGLVKLDGESKEKAKILAGMNRDRFAVCWDVVKAYLDKSGWGWVSMDSLFG 1464
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 258/584 (44%), Gaps = 86/584 (14%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGD 112
+ ++ A + L+ G+ YE E++YE V ++ Y + V R DD++ DD G+
Sbjct: 5 RADRLAQLRALRK-AGRTAFDDYEVEEAESIYETVDDEGYKKVVRDRLDRDDFVVDDNGE 63
Query: 113 GYVEDGRE--------IFDDDIEDVPQKKEKHDKRKK--NKNIQNPNAKGDIQKLLANMP 162
GY +DGRE ++D + E+ K K KRK+ + + Q+ KG I K P
Sbjct: 64 GYADDGREDWQNERQPMYDSESEEDLPKNSKAAKRKREADADRQDKLTKG-ISKYFNQKP 122
Query: 163 VKK--KKKEEVQLNNDDVLADLLSEVNTTI---APTLKLNTKTNE-----IVIPKEEPPA 212
K K +DD +A LL EV+T I A + K+N+ ++ P E
Sbjct: 123 TAAAPKPKPVRTAEDDDFMAGLLGEVDTNIQRPAASYGKAIKSNDRRKTRVLSPPLEDRG 182
Query: 213 PTAKEYLAN----FSKPIKVEKKIE--KPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKE 266
P+ A S P V + I+ + P+ + + V ++ A E
Sbjct: 183 PSRSSRQAADEPIHSSPPAVTGGDDDYTTIQDDDMPMMSDPLPSSPVAKIAERKAAIKTE 242
Query: 267 EPVDDGLWEQMQIDDWDNSQQTQDVL------PEQAKVELQI--EAIESQSIEEKVDVTN 318
E +D L E ++ N + + P+ AK + ++ E VD+T
Sbjct: 243 EAEEDDLMEVAEVKGGSNLKSANVNIRGSRPAPKLAKPSYPTPDSSSPTRGPAEDVDMTA 302
Query: 319 VESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRT-ADDSLPLATDHE 377
+ +V++ + + +SP SEP + + D+L E
Sbjct: 303 INNVAAKLNIMSSP-----------------------ASEPVMAGKLDPKDAL------E 333
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
+ F+ D E G++ LFGKV ++ S+ SC V V NI RK+Y LPR
Sbjct: 334 DDGSLNFFWFDYTE----VNGSLCLFGKVKNRQTGSYVSCFVKVDNILRKLYFLPREHRH 389
Query: 438 K----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
K T + V A VY E DQI +++K+ K ++ +KYAF LPG+P ++YL++ Y
Sbjct: 390 KHGRDTGDEVGFADVYEEVDQIMSKHKVTMHKIKQCTRKYAFELPGIPKEADYLKLLYPY 449
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEV 552
LP D G+TFSH+FGT ++ E ++ + I GP WL+ A+ S SWCK E+
Sbjct: 450 DKSPLPMDYQGETFSHIFGTNTALFEQFVMWKNIMGPCWLKIEGADFNAVSNASWCKLEL 509
Query: 553 QCNQMEKIRITNVCGNVLS----------RTLMGGRSERNEFLL 586
Q + I N+ + RT+ + +NE L+
Sbjct: 510 QVTKPNGITTLGEADNLEAPPLTMMSMALRTVFNPKDNKNEILV 553
>gi|412991410|emb|CCO16255.1| DNA polymerase alpha catalytic subunit [Bathycoccus prasinos]
Length = 1670
Score = 437 bits (1125), Expect = e-119, Method: Compositional matrix adjust.
Identities = 287/791 (36%), Positives = 423/791 (53%), Gaps = 117/791 (14%)
Query: 547 WCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK 606
W +Q + + +++N+ GN S+TL R++R EFL LH FH++ Y++PD+ K K
Sbjct: 894 WLMLHLQALPLTR-QLSNIAGNTWSKTLGHTRAQRVEFLFLHEFHKRKYMVPDRLSAKEK 952
Query: 607 KEGEETGEANKGKG------RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYN 660
+ + EA G G +K YSGGLVLEPKKG YDK+++++DFNSLYPSIIQEY+
Sbjct: 953 RR-VQAAEAKNGNGDKDVDDKKGPQYSGGLVLEPKKGLYDKYVLMLDFNSLYPSIIQEYD 1011
Query: 661 ICFTTIPVRMLQDSDITTLCEYLPEHQV------DTGILPSEIKKLVESRRQVKALMKQP 714
ICFTT+ + D+ L LP + + +LP I KLV+ RR VK L+K+
Sbjct: 1012 ICFTTVK----RGKDMAGLAPELPPPVLGKPGGENAAVLPQVICKLVQHRRAVKELLKKE 1067
Query: 715 NLSSDLL-MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV 773
++D++ Q DIRQ ALKLTANSMYGCLGF SRF+A+PLA L+T +GREIL +T L
Sbjct: 1068 --TNDVIKAQLDIRQLALKLTANSMYGCLGFSASRFYAKPLAELITGQGREILQSTVDLA 1125
Query: 774 ENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
+NL+Y+VIYGDTDS+MI+ N ++ V K+G ++K E NK YK LE+++DG Y+ MLLLK
Sbjct: 1126 QNLSYDVIYGDTDSIMINTNKDNLAEVHKVGQEVKREVNKRYKLLEIEMDGCYRSMLLLK 1185
Query: 834 KKKYAALSIS-KLSNGKMICSQEI--KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
KKKYAA+ + + GK I + + KG+D VRRDW +LA + G + +I ++
Sbjct: 1186 KKKYAAVVVEPSMHEGKTIYVERVEKKGLDTVRRDWCKLAKDVGDTCLDEIFKKR----- 1240
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVAL-RLN 949
+++D ++ IH+ +++ RT + N V L +TKQLTK+P +Y D + PHV+VAL R+
Sbjct: 1241 AVEDTVEKIHDALREARTKMVNNQVNLESYIVTKQLTKSPRDYPDANSQPHVKVALRRIE 1300
Query: 950 NTNSKKLKQGDTISYIIC--------EDGTSEAA--------------TQRAYNIEELKN 987
+ G+T+ YIIC +D T++A +RA++ EEL+
Sbjct: 1301 QGKQDGVNAGETVPYIICCEVKPEDEKDMTNDAIANGHASSKSGGKGLAERAFHPEELQE 1360
Query: 988 NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY--RSQIKESIQQSE 1045
N L++D++YYL+QQ+HPV++RL PIEGTDA R+A+CLGLD S + R+ + +
Sbjct: 1361 NPNLRVDLHYYLTQQLHPVISRLCAPIEGTDAARLADCLGLDASKFAARNVGADDDDMNA 1420
Query: 1046 ENILGVGEAEEVKYQFCD---------KFEFTCMNPSCK-----QVNTVEAPTRLSTHGV 1091
++ Y+ C+ K EFT P + +++ +A S GV
Sbjct: 1421 NRYAACSLDDDAMYEKCEPLKLFASDGKTEFTF--PGVRDILLGKISCADALKPPSARGV 1478
Query: 1092 VFVLDECIN--------PECKVP-----------------------PYTYLP----HLIN 1116
V ++ N P+ K P T P N
Sbjct: 1479 VSATEDKENATTTSVKTPQPKTPGSGTAATTPDAATTQKSKTDASATTTIQPLSAAAFTN 1538
Query: 1117 KLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLG------LKTRLCTTCHKYKLHRVYT 1170
+++ + K I KYY L+ +D TR L + T+ T + + +
Sbjct: 1539 QVTLQVRKTIQKYYAQKLRSDDELYPCETRDITLKAVGDVEVGTKPLNTICSGVMKKSFE 1598
Query: 1171 ELQLYQQLSFFHYICDITKALTKSDTPSIK------FDSETYMGYCKMKQHVERFLESSA 1224
E +LY QL F + AL + SI+ E K VE L SA
Sbjct: 1599 ERELYTQLVHFKRLLSRKDALGRIKDQSIRGTCEKNITKEMRTALDLAKDEVEEVLNLSA 1658
Query: 1225 YNIVDLKKLFS 1235
Y V+L LF
Sbjct: 1659 YRWVNLSTLFG 1669
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 53/278 (19%)
Query: 367 DDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHS---------SC 417
D LP+ + K +FLDA EDI PGTV+LFGKV + + + S
Sbjct: 386 DSGLPV---DDFDKTLPFYFLDAQEDI-GSPGTVFLFGKVPTRRDPQTNVLDPSLGTVSS 441
Query: 418 CVIVQNIDRKIYLLPR----------SEHLKTKEPVSIAQVYSEFDQIA----------- 456
C +V N+ R ++++PR S LKT E + A+ S+ D++A
Sbjct: 442 CAVVNNMQRCVFVVPRLEFTPQSLDESNELKTLEEKANAKDASKADKVALLKWLQVKTKP 501
Query: 457 ---------TQYKILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDT 506
++ + + + + +KY F +P +Y ++++YS ALPSD+ G+T
Sbjct: 502 VKDELKKIMSERGVDQYTMKPVYRKYCFERNDIPSGGQYVIKLKYSYLNSALPSDIKGET 561
Query: 507 FSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI--------SWCKYEVQCNQME 558
F GT+++ LE+LL++ KI GPSWL AE P SWCK EV
Sbjct: 562 FCGALGTQTNALEHLLVKSKIMGPSWLALHNAEIVPQATLKDKEAMKSWCKLEVNLQNGH 621
Query: 559 KIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYV 596
K + N + +GG+ +++ A ++ V
Sbjct: 622 K-SVRNPTVEAIEALGLGGQQRDPPTVIVAALKLQTVV 658
>gi|169610559|ref|XP_001798698.1| hypothetical protein SNOG_08383 [Phaeosphaeria nodorum SN15]
gi|111063539|gb|EAT84659.1| hypothetical protein SNOG_08383 [Phaeosphaeria nodorum SN15]
Length = 1462
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 279/728 (38%), Positives = 409/728 (56%), Gaps = 63/728 (8%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH+ Y+ PDKQ+GK
Sbjct: 756 IAAISMKVQMLPLTKV-LTNLAGNSWARTLSGTRAERNEYILLHEFHKNKYICPDKQWGK 814
Query: 605 NKKE--GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNIC 662
+K + E +KK + GGLV EP+KG YDKFI++MDFNSLYPSIIQE+NIC
Sbjct: 815 SKIKVEEEAAEGEEGTDAKKKDKFKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEFNIC 874
Query: 663 FTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
FTT+ L + D +P++Q + GILP I LV RR+VK LMK + ++D L
Sbjct: 875 FTTVERSDLSEDDDKV--PEVPDNQ-EQGILPRLIATLVSRRREVKKLMKAKDATTDQLA 931
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIY 782
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL TK + E VIY
Sbjct: 932 TWDIKQLALKLTANSMYGCLGYTKSRFYARPLAMLTTYKGREILRRTKDMAEEKMLRVIY 991
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
GDTDS+MI+ NV++ K+GN+ K N Y+ LE+DID V++ +LL KKKYAA+++
Sbjct: 992 GDTDSVMINTNVDNIQDALKLGNEFKKIVNDSYRLLEIDIDNVFRRILLHAKKKYAAINM 1051
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ +GK I E+KG+D+ RR++ L+ + +++ +L + + ++ IH H
Sbjct: 1052 VPV-DGKYIEKLEVKGLDMRRREYCALSKDTSTELLNFLLSGEDP-----EVVVEKIHNH 1105
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTI 962
++++ + VP I QL K P+EY + ++P VQVAL+L K +K D +
Sbjct: 1106 LRELSKQMREYAVPTRKYTIYTQLGKNPKEYPNGNSMPSVQVALKL-QAKGKHVKAKDVM 1164
Query: 963 SYIICED--GTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
S+II + G++E A + AY ++E LK S+LK D++YYL +QI P V RL PI GT+
Sbjct: 1165 SFIITGEASGSAENAAKNAYPVDEVLKPGSELKPDIDYYLHKQILPPVERLCAPITGTNI 1224
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENI--LGVGEAEEVKYQFCDKFEFTCMNPSCK-- 1075
+A CLGLDTS YR Q E + L + V++Q C C +
Sbjct: 1225 TLLAACLGLDTSKYRVNTTSGATQEETEVHPLESQIPDSVRFQACALLWLRCRGCTTTFP 1284
Query: 1076 -QVNTVEAPT-------RLSTHGVVFVLDECINPECKVPPYTYLPH--LINKLSQDMNKY 1125
Q + AP+ +S +GV +C N C LP+ ++ +L + +Y
Sbjct: 1285 FQGLSATAPSASLAKLQTVSHNGV-----QCPNTNCG----NILPNISIVAQLESSIRQY 1335
Query: 1126 IVKYYEGWLKCEDPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQL 1178
+ YY G+L C+DP C + TR RC LG K L C K+H E ++ QL
Sbjct: 1336 LASYYAGYLVCDDPQCGNRTRQMSVYGSRC-LGPKG-LAKDCLG-KMHYELKERDVWNQL 1392
Query: 1179 SFFHYICDITKALTKSDTPSIKFDSE-----------TYMGYCKMKQHVERFLESSAYNI 1227
++ + D+ + + K D IK + E + +K V+++LE +
Sbjct: 1393 LYYQSLFDVDR-VAKEDV--IKAEGEGREKIKVLAEVNRERFGTLKGVVDKWLERNGRQW 1449
Query: 1228 VDLKKLFS 1235
V + LFS
Sbjct: 1450 VQMDSLFS 1457
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 162/608 (26%), Positives = 259/608 (42%), Gaps = 103/608 (16%)
Query: 56 NKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGD 112
++ A +L+ L+ G YE +E +Y+EV E Y + V R +DD+I DD G+
Sbjct: 2 SRAAKLAELRALRAAGKTRLSTYEVAEEEQLYDEVDEDGYKKIVRSRLDQDDFIVDDNGE 61
Query: 113 GYVEDGREIFDD-------------DIEDVPQK-KEKHDKRKKNKNIQNPNAKGDIQKLL 158
GYV+DGRE +DD + ED P K K KR+++K Q G I K
Sbjct: 62 GYVDDGREEWDDGQGRYRYAATDSEEEEDRPAKGKAAKRKREEDKEKQEKINNG-ISKYF 120
Query: 159 ANMPVKKKKKEEVQLNNDDV--LADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK 216
K K + + DV + DLL E++T N P+ A+
Sbjct: 121 GAKNAAKAPKAKPAVTAADVDFMDDLLGEIDT------------NPRAAPRMRAVKTEAR 168
Query: 217 EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQ 276
S P+ + P+ +K +DS M N + DDGL
Sbjct: 169 RKTRVLSPPVS---------ENRPAVIKRSSNDSDSYMP---NTPPAANAFADDDGL--P 214
Query: 277 MQIDDWDNSQQTQDVLPEQAKVE------LQIEAIESQSIEEKVDVTNVESVSSAVELST 330
DD S P VE +++E + +E ++ +++V ++
Sbjct: 215 TFDDDVPMSDPPLQSSPVAKAVERKSQPVVKVEEEDDDLLEVAQPTRHLGVPAASVNMAG 274
Query: 331 SPPPQVVEKKEH----------------KCAEWE------AIQTEPSTSEPQVHSRTADD 368
P + K ++ + W + + P+ V ++D
Sbjct: 275 KRPISKLRKADYPTPASSSPVGPSTASINASSWNDVTDKLNVMSSPAPQTTGVGKMRSED 334
Query: 369 SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKI 428
L E RMF++D E G++ LFGKV + S++SC V + NI RK+
Sbjct: 335 VL------EEDGSVRMFWIDYTE----INGSLCLFGKVKDRTTGSYASCFVKIDNIMRKL 384
Query: 429 YLLPRSEH-----LKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDL 483
Y LPR EH + T E + ++ V E D I +++++ K + +KYAF L +P
Sbjct: 385 YFLPR-EHRHVRGVATDEEIGLSDVSDELDNIMSKHRVNLHKIKPCTRKYAFELADIPKE 443
Query: 484 SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS 543
++Y+++ Y L SDL+G+TFSHVFGT +S E +L + I GP WL+ A+ F +
Sbjct: 444 ADYMKLLYGYDKMPLSSDLTGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIDGAD-FGA 502
Query: 544 --RISWCKYEVQCNQMEKIRITNVCGNV---------LS-RTLMGGRSERNEFLLLHAFH 591
SWCK E+Q ++ I + + N+ LS RT + + E L+ A
Sbjct: 503 IHNASWCKLEIQVSKPNSITVLSNSDNLDAPPMTLMSLSLRTSFNAKENKQEILMASAMV 562
Query: 592 EKSYVLPD 599
++ L D
Sbjct: 563 YDNFSLSD 570
>gi|164424154|ref|XP_963131.2| hypothetical protein NCU07870 [Neurospora crassa OR74A]
gi|157070398|gb|EAA33895.2| hypothetical protein NCU07870 [Neurospora crassa OR74A]
Length = 1479
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 284/712 (39%), Positives = 402/712 (56%), Gaps = 61/712 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQY--GKNKKEGEETGEANKGK 619
+TN+ GN +RTL G R+ERNE++LLH FH YV+PDKQ G+ + E E E
Sbjct: 784 LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYVVPDKQTFKGRQRIEEENAEEEGGEG 843
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ L + D
Sbjct: 844 GKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVDRTSLSEDD--DA 901
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P+ Q GILP I LV RRQVK+LMK N + + L +DI+Q ALKLTANSMY
Sbjct: 902 VPEVPKEQAQ-GILPKLIATLVSRRRQVKSLMKDKNATPEELATWDIKQLALKLTANSMY 960
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYGDTDS+MI+ N ++
Sbjct: 961 GCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESNSLQVIYGDTDSVMINANKDNVAE 1020
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
++G++ K N+ Y+ LE+DID V++ +LL KKKYAA+++ ++ NGK + E+KG+
Sbjct: 1021 ALRVGHEFKKAVNERYRLLEIDIDNVFRRILLQAKKKYAAINMVEV-NGKWVEKMEVKGL 1079
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVP 916
D+ RR++ L+ E ++++IL S DD +Q IHE+++ I + G VP
Sbjct: 1080 DMKRREYCGLSKEISNRILTEIL--------SGDDTEVSVQRIHEYLRDISAKMREGAVP 1131
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG--TSEA 974
+ I+ QL KAP++Y + ++P VQVALR K +++GD ISYII D TSEA
Sbjct: 1132 VQKYIISTQLGKAPKDYPNADSMPQVQVALR-ELAKGKTIRKGDVISYIITGDSKTTSEA 1190
Query: 975 ATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+RAY ++ LK S L DV +Y+ +QI P V RL I GT ++AE LGLD Y
Sbjct: 1191 VAKRAYTPQDVLKAESGLSPDVEWYIGKQIFPPVERLCANIVGTSTSQLAENLGLDVRRY 1250
Query: 1034 RSQIKESI---QQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA-PTRLSTH 1089
S + Q E + L + +++Q C + C CK + E + S +
Sbjct: 1251 SSNTNNNSSGPQDLEIHPLESQIPDSLRFQSCARLSLRCRK--CKTSHPFEGLASPSSVN 1308
Query: 1090 GVVFVLDECINPECKVPPYTYLPHL--INKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
V +C P C+ LP L + ++ + +YYEGWL C+D C + TR
Sbjct: 1309 NVTPSGIQC--PSCQY----VLPMLSVVAQVEAAVRAQTARYYEGWLVCDDSSCGNRTRQ 1362
Query: 1147 ------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS------ 1194
RC LG K C ++ YTE +Y QL +F + D+ KA +K+
Sbjct: 1363 ISVYGTRC-LGSKGLARGECGG-RMRYEYTERDIYNQLVYFASLWDVDKAKSKAKENNDE 1420
Query: 1195 DTPSIKFDSETYMGYCKMKQH-----------VERFLESSAYNIVDLKKLFS 1235
D + K +E M +H VE++L+ V + LF+
Sbjct: 1421 DVDAAKLSAEEKERVAIMAEHNRVRFGTVKGVVEKYLDKCGRRWVAMDTLFA 1472
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 246/544 (45%), Gaps = 66/544 (12%)
Query: 50 QKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDD 108
+++ K +K+A +L++L+ G K Y+ + +YEEV E +Y + V R EDD++ D
Sbjct: 3 RRVAKRDKYA---ELRELRQSGKKKTYDVGEIDELYEEVDENQYKKIVRDRLNEDDFVVD 59
Query: 109 DGGDGYVEDGREIFD------DDIED---VPQKKEKHDKRKKNKNIQNPNAKG-DIQKLL 158
D G+GY +DGRE +D D E+ +P K + K++K +A DI +
Sbjct: 60 DNGEGYADDGREEWDRLPQYHSDSEEELGLPGSKPRKSKKQKEHEDAKRDANDRDITEYF 119
Query: 159 ANMPVKKKKKEEVQLNNDD--VLADLLSEVNTTI-APTLKLNTKTNE--------IVIPK 207
VK K++V +D L DL+ +V I P +++ K + ++ P
Sbjct: 120 TKGAVKAPPKQKVIKTEEDEKFLDDLIDQVTAQIPVPVTRVSKKRDRSVERRKVRVLSPV 179
Query: 208 EEPPAPTAKEYLA---NFSKPI-----KVEKKIEKPIKKEPSPLKDEIKSNDSVMEVE-- 257
EP P AK S P + + EP+P+ D + S D++M
Sbjct: 180 REPRPPMAKRAKTVDDRASSPAGDDDLLPDDDYLPAMDDEPAPVSDYLMS-DAIMPSSPA 238
Query: 258 MNVAEQ---SKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
VA + + EP + DD D + +V A + S+ I++
Sbjct: 239 AKVATRRTFGRPEP-------KKNEDDEDEDEDMMEVAHTGAVTAASVNISASRQIKK-- 289
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAI-QTEPSTSEPQVHSRTADDSLPLA 373
+ E V ++ + +P P+V A W I Q S Q R+ +
Sbjct: 290 -ILKTEPVPASSSPARAPAPEV------DAASWNEINQKLNVVSMSQSEGRSVG-KIDYK 341
Query: 374 TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
E MF+ D E G++ LFGKV K+ ++ SC V V NI RK++ LPR
Sbjct: 342 DAIEEDGSLNMFWTDYTE----VNGSLCLFGKVLNKKTKTYVSCFVKVDNILRKLFFLPR 397
Query: 434 SEHLKTKEPVSIAQ----VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ E + VY+E D+I T+ + K + +KYAF LP VP S+YL++
Sbjct: 398 KYRVRGGEETTEEVEMMDVYNEVDEIMTKMNVGMHKIKACTRKYAFELPDVPKESQYLKL 457
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWC 548
Y PA+ G+TFSHVFGT ++ E +L + I GP WL+ +A+ R S C
Sbjct: 458 LYPYTKPAMEPTHKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTSLRNASHC 517
Query: 549 KYEV 552
K EV
Sbjct: 518 KLEV 521
>gi|302803376|ref|XP_002983441.1| hypothetical protein SELMODRAFT_234261 [Selaginella moellendorffii]
gi|300148684|gb|EFJ15342.1| hypothetical protein SELMODRAFT_234261 [Selaginella moellendorffii]
Length = 1386
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 273/662 (41%), Positives = 387/662 (58%), Gaps = 96/662 (14%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK------------- 607
++TN+ GN+ S+TL G R++R E+LLLH F+ + Y++PDK K+
Sbjct: 744 QLTNISGNLWSKTLQGARAQRVEYLLLHEFYGRKYIVPDKVSASEKEKDNEKKRKTAQQD 803
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
E E A + K +K AY+GGLVLEPKKG YDK+I+L+DFNSLYPSIIQEYNICFTT
Sbjct: 804 EDFEPDSAVEAKNKKAPAYTGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTT-- 861
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL--MQYD 725
V D I++L P G+LP +K LV+ R+QVK +K+ ++D+L Q D
Sbjct: 862 VERSSDGSISSL----PNADA-PGVLPQVLKALVDRRKQVKQWLKK---TTDVLKYQQMD 913
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGD 784
I+Q+ALKLTANSMYGCLGFPNSRF+A+ +A L+T++GREIL +T LV+N LN EVIYGD
Sbjct: 914 IQQQALKLTANSMYGCLGFPNSRFYAKFIAELITSQGREILQSTVDLVQNVLNLEVIYGD 973
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+MI+ ++D I Q+ E NK YK LE+D+DGV+K MLLLKKKKYA + +
Sbjct: 974 TDSIMINTGLDDLLKAKSIAAQVIKEVNKKYKLLEIDLDGVFKRMLLLKKKKYACVKVET 1033
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
++GK+ E +G+D+VRRDWS L+ + G F++ QIL E S +D + IH+ ++
Sbjct: 1034 SADGKLREVIEQRGLDIVRRDWSLLSKDVGNFILEQILSEGSR-----EDVVDAIHDKLR 1088
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
K++ D+ NG + L ITK L+K PE+Y D K PHVQVALR K GDTI Y
Sbjct: 1089 KLQDDMRNGRIELEKYVITKSLSKRPEDYPDSKNQPHVQVALRRKQEGHKCFP-GDTIPY 1147
Query: 965 IIC--EDGTSEAATQRAYNIEELK-NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
+IC E +RA + +ELK IDV+YYLSQQIHPVV+RL PIEGTD
Sbjct: 1148 VICCQEGVLGVPLAERARHPDELKAGGGGWIIDVDYYLSQQIHPVVSRLCTPIEGTDPSH 1207
Query: 1022 IAECLGLDTS--LYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNT 1079
IA+CLGLD S ++ + + ++G ++E+
Sbjct: 1208 IADCLGLDPSKVIFYAHVL--------TLVGEDQSED----------------------- 1236
Query: 1080 VEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDP 1139
G +L+E P P ++++ ++ +I +YY+ W+ C+D
Sbjct: 1237 -------ENAGTQSLLNE--------PLSIVSPQVLDRAAE----FIQRYYDCWMVCDDE 1277
Query: 1140 GCSDLTRRCPLGL-----KTRLCTT---CHKYKLHRVYTELQLYQQLSFFHYICDITKAL 1191
C+ +R L + + +C C+ +L R Y+++ LY QL+ F + D+ + L
Sbjct: 1278 MCNHTSRDTILRIVGDAERGAVCPNFPRCNG-RLVRQYSQVDLYNQLTHFFRLLDVNRVL 1336
Query: 1192 TK 1193
K
Sbjct: 1337 QK 1338
Score = 119 bits (299), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 134/298 (44%), Gaps = 62/298 (20%)
Query: 308 QSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQT-------------EP 354
Q+ E K D VE E S PPP EK+ AE A+ T EP
Sbjct: 190 QTSEAKEDTAKVE------EDSLPPPPSTSEKQ----AEDSAVSTFLVADAEVKIKVEEP 239
Query: 355 STSEPQV-----HSRTADDSLPLATDH-----------ENKKVFRMFFLDAFEDIY-KQP 397
S P + HS + ++ + A D + FFLDA+E+ +
Sbjct: 240 SQELPPLPFNADHSTSKNERIKAAEDSSGLGEMPALPADEMGNLSFFFLDAYEEAFGANA 299
Query: 398 GTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP-----------------RSEHLKTK 440
GTV+LFGKV + + SCCV V+NI R ++ +P S LK K
Sbjct: 300 GTVFLFGKV--QRGGKYVSCCVAVRNIQRCVFAVPGPSVFPDGLVNTLEQEATSSELKVK 357
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALP 499
++ E + + + F +++ YAF+ V + Y L++ Y K P LP
Sbjct: 358 LQEMAREMKMELSEKLMELNVSKFSMIPVKRSYAFDRMDVRSGAHYYLKLSYPFKDPTLP 417
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP--SRISWCKYEVQCN 555
DL G F+ VFGT++S LE L++R+IKGP WL + + P S+ISWCK EV +
Sbjct: 418 GDLRGAHFTSVFGTRTSALETFLIKRRIKGPCWLSISNSHQIPCSSQISWCKVEVSVD 475
Score = 40.0 bits (92), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR--QEDDWIDDDGGDGY 114
AA ++LK L+ G + +E +E +++ + EK+Y V KR + D++ DD G GY
Sbjct: 22 AALEQLKRLREGGGRRVDTFELKVEEQIFDRLDEKDYALLVAKRRLESQDFVVDDDGLGY 81
Query: 115 VEDGREIFDDDIEDVPQKKEKHD 137
+ G E + D+ +P+ ++ D
Sbjct: 82 ADIGEE-ENWDVGAMPESSDEED 103
>gi|330918671|ref|XP_003298310.1| hypothetical protein PTT_08978 [Pyrenophora teres f. teres 0-1]
gi|311328568|gb|EFQ93598.1| hypothetical protein PTT_08978 [Pyrenophora teres f. teres 0-1]
Length = 1446
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 273/673 (40%), Positives = 387/673 (57%), Gaps = 55/673 (8%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN RTL G R+ERNE++LLH F++ Y+ PDKQ+GK
Sbjct: 735 IAAISIKVQMLPLTKV-LTNLAGNSWGRTLSGTRAERNEYILLHEFYKNKYICPDKQWGK 793
Query: 605 NKKE--GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNIC 662
+K + E +KK + GGLV EP+KG YDKFI++MDFNSLYPSIIQE+NIC
Sbjct: 794 SKAKVDEEAAEGEEGADAKKKDKFKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEFNIC 853
Query: 663 FTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
FTT+ L + D +P HQ D GILP I LV RR+VK LMK + + D L
Sbjct: 854 FTTVERSDLSEDDDKV--PEVPTHQ-DQGILPRLIATLVSRRREVKKLMKAKDATPDQLA 910
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIY 782
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL TK + E VIY
Sbjct: 911 TWDIKQMALKLTANSMYGCLGYTKSRFYARPLAMLTTYKGREILRKTKDMAEEKALRVIY 970
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
GDTDS+MI+ NV++ K+GN+ K E N Y+ LE+DID V++ +LL KKKYAA+++
Sbjct: 971 GDTDSVMINTNVDNIQDALKLGNEFKKEVNDSYRLLEIDIDNVFRRILLHAKKKYAAINM 1030
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ +GK I E+KG+D+ RR++ L+ E +++ +L + + ++NIH H
Sbjct: 1031 VPV-DGKYIEKLEVKGLDMRRREYCALSKETSTELLNFLLSGE-----DPEVVVENIHNH 1084
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTI 962
++++ + +P I QL K P EY + ++P VQVALRL K +K D +
Sbjct: 1085 LRELSKQMREYAIPSRKYTIYTQLGKNPNEYPNGGSMPSVQVALRL-QAKGKHVKAKDVM 1143
Query: 963 SYIICED--GTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
S+II + G++E A + AY ++E LK +S LK D++YYL +QI P V RL PI GT+
Sbjct: 1144 SFIITGESSGSAENAAKNAYPVDEVLKPDSGLKPDIDYYLHKQILPPVERLCAPISGTNV 1203
Query: 1020 VRIAECLGLDTSLYR-SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNP---SCK 1075
+A CLGLDTS YR S + S QQ E ++ Q D F C +P C+
Sbjct: 1204 TLLAACLGLDTSKYRVSTVSGSAQQDT-------EIHPLESQIPDSVRFQCCSPLWLRCR 1256
Query: 1076 QVNTV--------EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHL--INKLSQDMNKY 1125
TV +PT LS V +C P C LP++ + ++ + +
Sbjct: 1257 ACTTVFPFQGLSSTSPTTLSLQTVSHNGIQCPAPNCG----NILPNISVVAQVESSIRQI 1312
Query: 1126 IVKYYEGWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQ 1176
+ YY G++ C+DP CS+ TR RC P GL R C Y++ E ++
Sbjct: 1313 LAAYYAGYVVCDDPQCSNRTRSISVYGHRCLGPKGL-ARDCLGKMSYEIK----ERDVWN 1367
Query: 1177 QLSFFHYICDITK 1189
QL +F + D+ +
Sbjct: 1368 QLLYFASLFDVDR 1380
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 155/603 (25%), Positives = 256/603 (42%), Gaps = 110/603 (18%)
Query: 51 KIDKTNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWID 107
++ K A +L+ + G YE +E +Y+ V E+ Y + V R EDD++
Sbjct: 3 RVGKKTGAALLAELRANRAAGKTRLSTYEVAEEEQLYDTVDEEGYKKIVRGRLDEDDFVV 62
Query: 108 DDGGDGYVEDGREIFDDD------------IEDVPQKKEKHDKRKKNKNIQNPNAKGDIQ 155
D G+GYV+DGRE +DDD E+ P K + ++++ + I
Sbjct: 63 GDEGEGYVDDGREEWDDDQGKYHYAATDSEGEERPAKGKAAKRKREEDEEKRKKIDNGIS 122
Query: 156 KLLANMPVKKKKKEEVQLN--NDDVLADLLSEVNTTI--APTLKLNTKTNEIVIPKEEPP 211
K + K K + + D + DLL E++T K T ++ +P + PP
Sbjct: 123 KYFSAKNAAKAPKAKPVATAADKDFMNDLLGEIDTNPNRPAATKRRTDDSDAYMP-DTPP 181
Query: 212 A----------PTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVME------ 255
A PT + +A S P + K +++ P+ + + D +ME
Sbjct: 182 ALNAHADDDGLPTFDDDVA-MSDPPLPSSPVTKAVERRTQPVVKQEEDEDDLMEIAQPTT 240
Query: 256 ---VEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEE 312
V + + P+ +++ ++ + V P A
Sbjct: 241 HHGVPVASVNMAGRRPI-----AKLKKEENPTPASSSPVGPSPASF-------------- 281
Query: 313 KVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPL 372
D ++ V+S + + +SP PQ T +PQ D++
Sbjct: 282 --DASSWSDVTSKLNVMSSPAPQT---------------TGVGKMQPQ-------DAV-- 315
Query: 373 ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
E R F++D E G + LFGKV ++ ++SSC V V NI RK+Y LP
Sbjct: 316 ----EEDGSLRFFWIDYTE----INGNLCLFGKVKDNKSGNYSSCFVKVDNILRKLYFLP 367
Query: 433 RS-EHLK---TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
R H++ T E + ++ V E D I +++++ K + +KYAF LP +P ++YL+
Sbjct: 368 REYRHVRGVATDEEIGLSDVSDEVDSIMSKHRVNLHKIKPCTRKYAFELPDIPKEADYLK 427
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEF--PEAEKFPSRIS 546
+ Y L SDL G+TFSHVFGT +S E +L + I GP WL+ P+ S S
Sbjct: 428 LLYGYDKMPLSSDLKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIDNPDFGAL-SNAS 486
Query: 547 WCKYEVQCNQMEKIRITNVCGNV---------LS-RTLMGGRSERNEFLLLHAFHEKSYV 596
WCK EV ++ I + + N+ LS RT + + E L+ A ++
Sbjct: 487 WCKLEVLVSKPNNITVMSASDNLDAPSMTLMSLSLRTTFNAKDNKQEILMASAMIYDNFS 546
Query: 597 LPD 599
L D
Sbjct: 547 LTD 549
>gi|429863473|gb|ELA37924.1| DNA polymerase alpha catalytic [Colletotrichum gloeosporioides Nara
gc5]
Length = 1471
Score = 434 bits (1117), Expect = e-118, Method: Compositional matrix adjust.
Identities = 279/723 (38%), Positives = 413/723 (57%), Gaps = 64/723 (8%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ +
Sbjct: 769 ITALALQVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQTFR 827
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+ E+ E +G+G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICFT
Sbjct: 828 GRMAQEDNQE-EEGEGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICFT 886
Query: 665 TIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
T+ R + D + E +P+ Q D GILP I LV RRQVKALMK + +++ L +
Sbjct: 887 TVN-RSAMNEDEDAVPE-VPKDQ-DQGILPRLIATLVSRRRQVKALMKDKSATTEQLATW 943
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGD 784
DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ +VIYGD
Sbjct: 944 DIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESKALQVIYGD 1003
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+MI+ NV + FK+G + K N+ Y+ LE+DID V++ +LL KKKYAA+++ +
Sbjct: 1004 TDSVMINANVENVADAFKVGQEFKKAVNERYRLLEIDIDNVFRRILLQAKKKYAAINLVE 1063
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL--DEQSYTDYSLDDRLQNIHEH 902
+GK I E+KG+D+ RR++ L+ E ++++IL DE + + IHE+
Sbjct: 1064 -KDGKFIEKMEVKGLDMKRREYCTLSKEISSKILNEILSGDETEVS-------ISRIHEY 1115
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTI 962
+++I + VP I QL K P EY + ++P VQVALR K +++GD +
Sbjct: 1116 LREISGMMREQSVPPQKYIIFTQLGKTPTEYPNADSMPQVQVALR-EIARGKTVRRGDVV 1174
Query: 963 SYIICEDG-TSEAATQRAY-NIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
SYII D +S+ A +RAY + +K +S L DV +Y+ +QI P V RL I GT +
Sbjct: 1175 SYIITGDPQSSDPAPKRAYLPADVMKADSGLSPDVEWYMGKQIFPPVERLCANIVGTSSS 1234
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAE-----EVKYQFCDKFEFTCMNPSCK 1075
++AECLGLD Y+S + QS N + + E +V++ C + C +CK
Sbjct: 1235 QLAECLGLDIRRYKSA--QDGHQSSSNDMEIHPLESQIPDDVRFAECARLSLRCR--TCK 1290
Query: 1076 QVNTVEA----PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYE 1131
+ + E P R+S GV+ C + + +P + ++ ++ + +YYE
Sbjct: 1291 KSSVFEGLLAQPDRVSASGVL-----CDSCDATIP----MMSIVAQVEHALRTQTARYYE 1341
Query: 1132 GWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFH 1182
GWL C+D C TR RC P GL R C +Y+ +TE +Y QL +F
Sbjct: 1342 GWLVCDDTACGIRTRQMNVYGTRCLGPKGL-ARDCLGRMRYE----FTEKAIYNQLVYFA 1396
Query: 1183 YICDITKALTKSDTPS----------IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKK 1232
+ D+ K +++ S + + +K V+++L+ V +
Sbjct: 1397 SLWDVEKIKASAESGSDLSREEKDKIFALAEHNRVRFDTVKGVVDKYLDKCGRQWVAMDT 1456
Query: 1233 LFS 1235
LF+
Sbjct: 1457 LFA 1459
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 263/544 (48%), Gaps = 66/544 (12%)
Query: 51 KIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDD 109
K D+ +K A +L+ L+ G K YE +YEEV E +Y + + R +DD++ DD
Sbjct: 3 KADRRSKLA---ELRALRQSGKKGNYEVEDVSELYEEVDENQYKKIIRDRLDQDDFVVDD 59
Query: 110 GGDGYVEDGREIFD-------DDIEDVP----QKKEKHDKRKKNKNIQNPNAKG-DIQKL 157
G+GY +DGRE +D D EDV + K K+++ + +A DI +
Sbjct: 60 NGEGYADDGREEWDRAPQYYSDSDEDVTIQGRGRPSKALKKQREDEVAKRDANDRDISEY 119
Query: 158 LANMPVKKKKKEEVQLNNDD--VLADLLSEVNTTI-APTLKLNTKTN---EIVIPKEEPP 211
VK + K +V +D LADLL EV+ + AP + K N E + P
Sbjct: 120 FTKGAVKTQAKPKVAKTKEDDAFLADLLGEVDANVPAPVSRSGGKRNRSPERRRARVLSP 179
Query: 212 APTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDD 271
AP + L+ +P V+ ++ PSP D+ +D M + + ++ P+
Sbjct: 180 APETRRPLSK--RPKTVDDRL-------PSPTIDDSVLDDGYMP---PMGDDREDSPI-- 225
Query: 272 GLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA-VELST 330
E I D + + Q K +++ E + + ++ ++V + ++++A V ++
Sbjct: 226 --VEAADIPMSDPAPSSPAAKVAQRKAQIKAEP-KDEDDDDMMEVAHAGTITTASVNIAG 282
Query: 331 SPPPQVVEKKEHKCAEWEAIQTEPS-TSEPQVHSRTAD---DSLPLATDH--ENKKVFRM 384
S PP+ + K E + + + P+ +EP V S + D L + + E + V ++
Sbjct: 283 SRPPKKLIKPEPYPS---PLNSSPAKAAEPMVDSSAWNFITDQLNVVSSSPAEARTVGKI 339
Query: 385 FFLDAFE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
+ DA E D + G++ LFGKV K+ + SC V V NI RK+Y LPR
Sbjct: 340 DYKDAVEPDGSLNLFWTDYTEVNGSLCLFGKVLNKKTGLYVSCFVKVDNILRKLYFLPRE 399
Query: 435 EHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
++ T E V + VYSE D + T+ + +K + ++KYAF LPG+P ++YL+
Sbjct: 400 TRVQGSEDTGEEVGMMDVYSEIDAMMTKMNVGMYKIKACKRKYAFELPGIPKEAQYLKCL 459
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWC 548
Y P + +G+TFS VFGT ++ E +L + I GP WL+ +A+ F + S C
Sbjct: 460 YPYTKPVIDGSATGETFSRVFGTNTALFEQFVLWKNIMGPCWLKINDAD-FGALKNASHC 518
Query: 549 KYEV 552
K EV
Sbjct: 519 KLEV 522
>gi|238880835|gb|EEQ44473.1| DNA polymerase alpha catalytic subunit [Candida albicans WO-1]
Length = 1470
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 256/655 (39%), Positives = 371/655 (56%), Gaps = 44/655 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--------YGKNKKEGEET 612
++TN+ GN S TL G R+ RNE++LLH F +Y++PDK+ Y + +
Sbjct: 766 QLTNIAGNAWSHTLSGTRAGRNEYILLHEFKRNNYIVPDKEDKTHKNTSYQQEARVENAE 825
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV-RML 671
+A KK Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+ R
Sbjct: 826 EDATTATSNKKPKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVNRDRFN 885
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
D LPE ++G+LP + LV RR+VK L+K P + QYDI+Q+AL
Sbjct: 886 VTHDENKDMPILPERDTESGVLPRLLNTLVSRRREVKKLLKDPKNTPFQKAQYDIKQQAL 945
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E+ + V+YGDTDS+MI
Sbjct: 946 KLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESSSLRVVYGDTDSVMID 1005
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL--SISKLSNGK 849
+ Y KIG Q K + N+ Y+ LE+DID V+K +LL KKKYAA+ SI+K +N +
Sbjct: 1006 TGASSYQEAIKIGEQFKVQVNERYRLLEIDIDNVFKRLLLHAKKKYAAMNASINKATNEE 1065
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
+ E+KG+D+ RR++ QL+ + FV+++IL +D + L +++++ ++
Sbjct: 1066 -TATLEVKGLDMRRREYCQLSKDISTFVLTKIL-----SDSDPETALLEVYDYLDDMKGK 1119
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-- 967
+ N +P+ +I +L+K P+ Y + K++P VQVALRL K +K G I+Y+I
Sbjct: 1120 IQNNEIPIDKYKINTKLSKDPKSYPNGKSMPQVQVALRLRE-EGKVIKAGSVITYVITAA 1178
Query: 968 -EDGTSEAATQRAYNIEEL--KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
+DG + +RA I+EL K + LK D NYYL +QI V RLLE IEG D VR+A
Sbjct: 1179 KDDGDNSTVAERARAIQELLSKKDPDLKPDANYYLEKQIFAPVERLLERIEGIDMVRVAT 1238
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
LG+DT Y ++K S E + +++ +++ C S + + A
Sbjct: 1239 SLGIDTKRYILRVKNSDANGEILPIESNISDKERFRATSYLVLHCKCGSSFRFGGIMAA- 1297
Query: 1085 RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
T+ V F C P L ++L + K+I YY GWL C+DP C
Sbjct: 1298 --ETYKVTFNGVCCTKCNYTFPAI----KLTSQLESMIRKHIALYYAGWLVCDDPACGIT 1351
Query: 1145 TR-------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
TR RC +G R C +Y+ Y + QLY QL +F I D+ K
Sbjct: 1352 TRQISVYGKRC-IGNSGRAMDCKGVMRYR----YNDKQLYNQLLYFQSIFDVDKT 1401
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 133/532 (25%), Positives = 236/532 (44%), Gaps = 59/532 (11%)
Query: 60 AFQKLKDLK--GQGVKHKYEFTADEN-VYEEVSEKEYTERVLKRQE---DDWIDDDGGDG 113
Q+LK+ + G+ V T D N +Y+EV E Y R KR + DD+I DD G+G
Sbjct: 10 TLQQLKEARKTGRNVNVVESDTDDYNEIYDEVDEDTY--RQHKRNQLMNDDFIVDDNGEG 67
Query: 114 YVEDGREIFDDD-----IEDVPQKKEKHDKRKKNKNIQNPNAK-GDIQKLLANMPVKKKK 167
YV++G + +DD D + KR+K ++ AK I+ M
Sbjct: 68 YVDNGADDWDDASRPNYYSDEENESMGSRKRRKKEDKTTKVAKTSQIRNFFKPMSGVSDS 127
Query: 168 KEEVQLNNDDVLADLLSEV----NTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFS 223
K++++ N DD+L D ++ N A + +N + N I K++ L N
Sbjct: 128 KKKLETNIDDILNDFGDDLDKKKNIPKAFSNSINKEVNNHNINKKK---------LKNTF 178
Query: 224 KPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWD 283
+K +K K L S+D M+++ +++P + + +
Sbjct: 179 SFSTSTRKTDKTTPK----LDAFNASSDYTMDID-----NFEDQPSSPFKLKSEVTPEAE 229
Query: 284 NSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHK 343
++ D P + E E++++Q E+ D + + + S P VV+K +
Sbjct: 230 TEKENIDPEPTKNVFENPSESLKNQ--EKVNDNDDEDDSDDDIVYSRKPRAAVVKKNQVD 287
Query: 344 CAEWEAIQTEPST--SEPQVHSRTADDSLPLATDH--ENKKVFRMFFLDAFEDIYKQPGT 399
PS+ S+P V+++ ++ + ++ D+ + F+MF+ D E +
Sbjct: 288 TVSAVKANQLPSSPISKP-VYTKFSNHTEKVSKDNIKDTSDSFKMFWFDYAE----AENS 342
Query: 400 VYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR------SEHLKTKEPVSIAQVYSEFD 453
+ LFGK+ KE S V V I R+++ LPR E K+K+ +I +
Sbjct: 343 LLLFGKIMTKEG-KLVSGVVKVDGICRELFFLPREYRIVDDEEDKSKKLTAIDVLEEIQP 401
Query: 454 QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV----RYSAKCPALPSDLSGDTFSH 509
+ Y + + +++ KKYAF L +P +EYL+V +P+++ G TF H
Sbjct: 402 LLLANYNLEELRAKPEVKKYAFELADIPKEAEYLKVLLPFNNETNRNIMPANIEGSTFRH 461
Query: 510 VFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQMEKI 560
VFGT ++ E+ +++R I GP WLE + S C+ EV ++ +I
Sbjct: 462 VFGTNANMFESFVMQRNIMGPCWLEIRGGDFDAMQNASHCQVEVVVDRPSQI 513
>gi|378733560|gb|EHY60019.1| DNA polymerase alpha subunit A [Exophiala dermatitidis NIH/UT8656]
Length = 1455
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 263/654 (40%), Positives = 379/654 (57%), Gaps = 42/654 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN--KKEGEETGEANKGK 619
+T + GN +RTL G R+ERNE++LLH FH Y+ PDK+YGK K E
Sbjct: 769 LTELAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKEYGKGRAKHNEENEDGEEGAD 828
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
+KK Y GGLV EP+KG YDKFI++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 829 TKKKDKYKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEYNICFTTVDRSTTSENENEEK 888
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P+ Q GILP I LV+ RR+VK LMK +++ L +D +Q ALKLTANSMY
Sbjct: 889 VPEVPDEQTQ-GILPKLISTLVKRRREVKKLMKDKRATAEDLALWDTKQLALKLTANSMY 947
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ SRF+A+PLA LVT KGREIL +TK L E+ +VIYGDTDS+MI+ N ++
Sbjct: 948 GCLGYTQSRFYARPLAMLVTFKGREILRSTKELAESNQLQVIYGDTDSVMINTNADNIAQ 1007
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
+G K N+ YK LE+DID +++ +LL KKKYAA++++++ +GK + E+KG+
Sbjct: 1008 ALSVGVDFKRSVNERYKLLEIDIDNIFRRLLLHAKKKYAAINMAEV-DGKYVEKLEVKGL 1066
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+ RR++ L+ EA + ++++IL + + L+ IHE+++++ + +P+
Sbjct: 1067 DMKRREYCALSKEASQRLLNEILSGE-----DPEVVLEKIHEYLRELAGKMRENAIPVQK 1121
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAAT 976
I +L K P+EY + ++P VQVALR K ++ D +SY++ E S A
Sbjct: 1122 YVIYTKLGKNPKEYPNADSMPQVQVALR-EIARGKTVRVNDVMSYVVTMGDEQTKSLPAP 1180
Query: 977 QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR- 1034
+R+Y ++ LK +S L DV YYL +QI P + RL PI GTD+VR+AECLGLD Y+
Sbjct: 1181 KRSYTPQDVLKPDSGLVPDVEYYLYKQIFPPIERLCAPIPGTDSVRLAECLGLDVRKYQI 1240
Query: 1035 --SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTRLSTH 1089
S S Q +E L ++V+++ + C +CKQ E T L T
Sbjct: 1241 NTSSGGASQQNNEITPLESQIPDDVRFRDAARLRLLCR--ACKQTTVYEGLCDSTDLCTP 1298
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR--- 1146
+ C N EC ++ + ++ +L + YYEGWL C+DP C + TR
Sbjct: 1299 DGIM----CSNGECG-HKFSNM-AIVAQLESQIRVQTSAYYEGWLVCDDPSCGNRTRQMS 1352
Query: 1147 ----RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS 1194
RC LG R C Y+ Y+E QLY QL +F + D+ KA K+
Sbjct: 1353 VYGHRC-LGPNGRAEGCLGRMSYE----YSEKQLYNQLLYFAGLFDVEKAKNKA 1401
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 156/550 (28%), Positives = 240/550 (43%), Gaps = 82/550 (14%)
Query: 59 AAFQKLKD--LKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
AA +L+ L G+ Y+ +Y+EV E Y + V R +DD++ DD G+GY
Sbjct: 5 AAIAQLRAQRLAGKTRLETYQIEDQGAIYDEVDEDGYKKVVRSRLDQDDFVVDDNGEGYA 64
Query: 116 EDGREIF--------DDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKK 167
+DGRE + DD EDVP K ++++ ++ I N PV K
Sbjct: 65 DDGREEWQNERQYYSSDDAEDVPLKGNASKRKREETREKDERTNHKILNYFNNAPVTAPK 124
Query: 168 -KEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPI 226
K + ++ +ADLL EV+ I PT K P + + S P+
Sbjct: 125 PKIQTTAEDEAFMADLLGEVDANILPTRTYTKK----------PVKSENRRKVRVLSPPL 174
Query: 227 KVEKKIEKPIKKEPSP-LKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNS 285
E+ +P K P+ L D + D+ P DD + DD DN
Sbjct: 175 TQERP--RPKYKAPTTDLVDTPPAQDAA--------------PEDDVM---HNFDDDDNI 215
Query: 286 QQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNV-----------ESVSSA-VELSTS-P 332
D LP V+ +E +I+E+ + + E V SA V ++ S P
Sbjct: 216 MS--DPLPSSPVVK-AVERKAKLTIKEEENDDDDDVMDVVQVVAHEGVQSASVNMTGSRP 272
Query: 333 PPQV----VEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDH-----------E 377
PP++ + + A+ ++S + S+ S P + ++ E
Sbjct: 273 PPKIKSAQLPTPNNSSPPLPAVNDVDASSWNNITSKLNIQSSPSSENYIFGKMKPQDAVE 332
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS--- 434
R F+LD E G++ LFGKV K + S V V N+ RK++ LPR
Sbjct: 333 EDGSLRFFWLDYTE----VNGSLCLFGKVKHKSTGRYLSAFVKVDNVLRKLFFLPRKYRH 388
Query: 435 -EHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
+T+E V +A VY+E D + ++ K+ K + +KYAF LP VP +EYL++ Y
Sbjct: 389 CNGRETQEEVEMADVYNEVDALMSRMKVTTRKVKPCTRKYAFELPDVPKEAEYLKLLYPY 448
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEV 552
ALP DL G+TFS VFGT ++ E +L + I GP WL +A+ + SWCK E
Sbjct: 449 DNAALPMDLQGETFSRVFGTNTALFEQFVLWKNIMGPCWLNIEDADFTAVNNASWCKLEC 508
Query: 553 QCNQMEKIRI 562
+ I +
Sbjct: 509 AVTRPANITV 518
>gi|241747993|ref|XP_002414368.1| DNA polymerase alpha catalytic subunit, putative [Ixodes scapularis]
gi|215508222|gb|EEC17676.1| DNA polymerase alpha catalytic subunit, putative [Ixodes scapularis]
Length = 978
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 267/674 (39%), Positives = 367/674 (54%), Gaps = 104/674 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--------------- 604
++ITN+ GNVLSRTL+GGRS+RNE+LLLHAF +++Y+ PDK + K
Sbjct: 323 LQITNIAGNVLSRTLLGGRSQRNEYLLLHAFSDRNYICPDKSFKKQAVKVRLREASLLHS 382
Query: 605 -------NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQ 657
+ K RK + PKK +S+ PS
Sbjct: 383 SIDAIIRHPTTTRRNSRLPKTNPRKVQPTAVVWSWSPKK------------DSMTPSSCS 430
Query: 658 EYNICFT--------------TIPVRMLQDSDITTLCEYLPE---HQVDTGILPSEIKKL 700
+ +T T P + +PE + G+LPSEI+KL
Sbjct: 431 WTSTAYTPPSSKSTTSASRPWTCPRVAATRRARAQAEDQIPELPSSSAEPGVLPSEIRKL 490
Query: 701 VESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTA 760
VESRRQVK LMK ++ +DL QYDIRQKALKLTANSMYGCLGF SRFFA+PLAAL+T+
Sbjct: 491 VESRRQVKNLMKAADVGADLYQQYDIRQKALKLTANSMYGCLGFAQSRFFAKPLAALITS 550
Query: 761 KGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLEL 820
+GREIL+ TK LVE + +VIYGDTDS+MI+ N D V K+GN++K+E NKLYKQLE+
Sbjct: 551 RGREILMQTKELVEKMGLDVIYGDTDSIMINTNSRDLKEVSKLGNKVKAEINKLYKQLEI 610
Query: 821 DIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQ 880
DIDG++K MLLLKKKKYAAL +S NG++ S+++KG+DVVRRDWS+LA + G++VI +
Sbjct: 611 DIDGIFKSMLLLKKKKYAALVVSVGPNGQVSTSKQLKGLDVVRRDWSELARKTGEYVIDE 670
Query: 881 ILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALP 940
+L +D S +D ++ IH ++ ++ + +PL+ +TK
Sbjct: 671 LL-----SDNSREDIVEKIHSYLMQLAAKIQGDLLPLSDFCVTK---------------- 709
Query: 941 HVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLS 1000
DG+S+ ATQRAY+ EELK N L ID YYL+
Sbjct: 710 ----------------------------DGSSQTATQRAYHPEELKGNDSLSIDKQYYLA 741
Query: 1001 QQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQ 1060
QQIHPVV R+ PI+GTDA IAE LGL+ + YR +E + G + Y+
Sbjct: 742 QQIHPVVARICAPIDGTDAAMIAEVLGLNPAHYRHYNHNEEDDTERRLNDGGASGLALYK 801
Query: 1061 FCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQ 1120
C++ + C + C V VE + + FVL+EC P+CK Y+ L N+++
Sbjct: 802 SCERVKLRCPSEGCTAVIAVEDIFERTGVELRFVLEEC--PQCKTALCGYINALCNQVTL 859
Query: 1121 DMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKYKLHRVYTELQLYQQL 1178
+ I K+Y GWL CED C TRR PL + LC C + +H Y LY QL
Sbjct: 860 FIRDCISKFYAGWLVCEDSVCCHRTRRLPLRFVKASPLCFACERSVMHPEYKTSDLYNQL 919
Query: 1179 SFFHYICDITKALT 1192
+ + D ++A+
Sbjct: 920 RYLSKLFDFSRAVA 933
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 32/138 (23%)
Query: 354 PSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNS 413
P P ++ +SLPL + +KV R F+LDA+ED +K PG V+LFGKV + + ++
Sbjct: 51 PLAEAPHENADVKVESLPLVENENGEKVVRFFWLDAYEDYFKNPGVVHLFGKVKLLDAST 110
Query: 414 HSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKY 473
++SC V V NI RK+YLLPR P ++ K+Y
Sbjct: 111 YASCTVTVCNIPRKVYLLPR--------PFAVT------------------------KRY 138
Query: 474 AFNLPGVPDLSEYLEVRY 491
AF+ GVP +EYLE+ Y
Sbjct: 139 AFDKEGVPAEAEYLEIVY 156
>gi|219114300|ref|XP_002176321.1| catalytic subunit p180 [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402724|gb|EEC42713.1| catalytic subunit p180 [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1147
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 280/720 (38%), Positives = 408/720 (56%), Gaps = 64/720 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++T V GN+ S TL R+ER E+LLLH FH + P+K A K +G
Sbjct: 452 QLTCVAGNLWSHTLKSNRAERTEYLLLHEFHRLQTLPPEKH------------RALKDEG 499
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
KA Y+GGLVLEPKKG YD +I+L+DFNSLYPSIIQEYN+CFTT+ L ++ L
Sbjct: 500 GSKAKYAGGLVLEPKKGLYDSYILLLDFNSLYPSIIQEYNLCFTTLDWAGLAGTEDNVLP 559
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+ LP+ + D G+LP I+ LVE RR VK L+K ++ + DIRQKALKLTANSMYG
Sbjct: 560 D-LPDTEADRGVLPRVIQSLVERRRTVKKLLKS-ETNAVRKEELDIRQKALKLTANSMYG 617
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNVNDYDS 799
CLGF NSRFFAQP+AAL+T+ GREIL T + + + +VIYGDTDS+MI+ +ND +
Sbjct: 618 CLGFSNSRFFAQPIAALITSMGREILQRTVDIAQQKVGLDVIYGDTDSIMINTRINDEND 677
Query: 800 VFKI---GNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
+ K+ G ++K E N+LY+ LEL+IDG+++ MLLLKKKKYAA ++ + NG++ QE+
Sbjct: 678 LPKVKELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAAKTVEEGPNGEVKYGQEL 737
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
KG+D+VRRDW + + G++V QIL Q D ++NIH H++++ T + G +P
Sbjct: 738 KGLDLVRRDWCIQSKDTGRYVTEQILSGQES-----DIVIENIHSHLEELATKMRAGNLP 792
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA-- 974
L ITK L+K P EY D K+ PHVQVA+ + N++ + GD I YII +EA
Sbjct: 793 LEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLK-NNRPVNTGDHIPYIITVSEEAEAED 851
Query: 975 -------ATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
+ +RA + EE L++N LK DV +YL+QQI P V RL EPIEG +AE L
Sbjct: 852 KKPKSSSSAERARHPEEILRSNGALKPDVEWYLTQQILPPVARLCEPIEGMSQQVLAEKL 911
Query: 1027 GLDTSLYRSQIKESIQQSEENILGVGEAEEV----KYQFCDKFEFTCMNPSCKQ----VN 1078
GLD S Y ++ S + ++ A + +++ +KF C + V
Sbjct: 912 GLDASRYNHAVRTSGDIDADELIDYTPASSLSDTERFKEVEKFYLHCYGCGVESQFPGVY 971
Query: 1079 TVEAPTRLSTHGVVFVLDECINPECKVP-------PYTYLPHLINKLSQDMNKYIVKYYE 1131
V ++ V L C NP+C P + + N +S + +YY
Sbjct: 972 HVVTNSQTGNQNTVSGL-HCTNPDCLRPMFWGHATQFECFARISNNISIWTQDVMRRYYS 1030
Query: 1132 GWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL 1191
++C++PGCS TR+ + L C+ K+ V++E +Y L + + +I A
Sbjct: 1031 STIRCDEPGCSLETRQLSVVGGVCLRRGCNG-KMCSVFSERSVYTHLKYMESLFNIDHAS 1089
Query: 1192 T--------KSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVD---LKKLFSCEEKQ 1240
T + D+ ++ + ET + ++ + R LES+ +N + +FS KQ
Sbjct: 1090 TQWNKKKKKQDDSYALVKNDETI--FKELHKVAMRGLESNGFNWISPAFWNGMFSIAAKQ 1147
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 22/177 (12%)
Query: 398 GTVYLFGKV-----FVKENNSHSSCCVIVQNIDRKIYLLPR-----SEHLKTKEPVSIAQ 447
G ++LFGKV + + S S CV+VQ+ R +Y+LPR S+ K +
Sbjct: 18 GDLWLFGKVRQPTTTTEASPSFVSACVVVQHNMRNLYVLPRQTASGSDDAKEDVEPDLQA 77
Query: 448 VYSEFDQIATQYKI-----LDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSD 501
V+ E + + + + S+ ++ YAF+ P VP + YL+V Y AK PALP+D
Sbjct: 78 VHGEVKSLLQTHVLPKTAGTSWASKPVQLTYAFDDPTVPRSATTYLQVLYDAKYPALPAD 137
Query: 502 LS------GDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
++ D + +F ++S E L++R+I+GPSWL + +SWC EV
Sbjct: 138 VAHPAGSVSDNIARIFNAQASITETFLVQRRIQGPSWLRLRAPRATTAPVSWCALEV 194
>gi|68465455|ref|XP_723089.1| likely DNA polymerase I alpha subunit p180 [Candida albicans SC5314]
gi|68465748|ref|XP_722942.1| likely DNA polymerase I alpha subunit p180 [Candida albicans SC5314]
gi|46444950|gb|EAL04221.1| likely DNA polymerase I alpha subunit p180 [Candida albicans SC5314]
gi|46445106|gb|EAL04376.1| likely DNA polymerase I alpha subunit p180 [Candida albicans SC5314]
Length = 1470
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 256/655 (39%), Positives = 371/655 (56%), Gaps = 44/655 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--------YGKNKKEGEET 612
++TN+ GN S TL G R+ RNE++LLH F +Y++PDK+ Y + +
Sbjct: 766 QLTNIAGNAWSHTLSGTRAGRNEYILLHEFKRNNYIVPDKEDKTHKNTSYQQEARVENAE 825
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV-RML 671
+A KK Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+ R
Sbjct: 826 EDATTATSNKKPKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVNRDRFN 885
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
D LPE ++G+LP + LV RR+VK L+K P + QYDI+Q+AL
Sbjct: 886 ITHDENKDMPILPERDTESGVLPRLLNTLVSRRREVKKLLKDPKNTPFQKAQYDIKQQAL 945
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E+ + V+YGDTDS+MI
Sbjct: 946 KLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESSSLRVVYGDTDSVMID 1005
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL--SISKLSNGK 849
+ Y KIG Q K + N+ Y+ LE+DID V+K +LL KKKYAA+ SI+K +N +
Sbjct: 1006 TGASSYQEAIKIGEQFKVQVNERYRLLEIDIDNVFKRLLLHAKKKYAAMNASINKATNEE 1065
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
+ E+KG+D+ RR++ QL+ + FV+++IL +D + L +++++ ++
Sbjct: 1066 -TATLEVKGLDMRRREYCQLSKDISTFVLTKIL-----SDSDPETALLEVYDYLDDMKGK 1119
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-- 967
+ N +P+ +I +L+K P+ Y + K++P VQVALRL K +K G I+Y+I
Sbjct: 1120 IQNNEIPIDKYKINTKLSKDPKSYPNGKSMPQVQVALRLRE-EGKVIKAGSVITYVITAA 1178
Query: 968 -EDGTSEAATQRAYNIEEL--KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
+DG + +RA I+EL K + LK D NYYL +QI V RLLE IEG D VR+A
Sbjct: 1179 KDDGDNSTVAERARAIQELLSKKDPDLKPDANYYLEKQIFAPVERLLERIEGIDMVRVAT 1238
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
LG+DT Y ++K S E + +++ +++ C S + + A
Sbjct: 1239 SLGIDTKRYILRVKNSDANGEILPIESNISDKERFRATSYLVLHCKCGSSFRFGGIMAA- 1297
Query: 1085 RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
T+ V F C P L ++L + K+I YY GWL C+DP C
Sbjct: 1298 --ETYKVTFNGVCCTKCNYTFPAI----KLTSQLESMIRKHIALYYAGWLVCDDPACGIT 1351
Query: 1145 TR-------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
TR RC +G R C +Y+ Y + QLY QL +F I D+ K
Sbjct: 1352 TRQISVYGKRC-IGNSGRAMDCKGVMRYR----YNDKQLYNQLLYFQSIFDVDKT 1401
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 133/532 (25%), Positives = 236/532 (44%), Gaps = 59/532 (11%)
Query: 60 AFQKLKDLK--GQGVKHKYEFTADEN-VYEEVSEKEYTERVLKRQE---DDWIDDDGGDG 113
Q+LK+ + G+ V T D N +Y+EV E Y R KR + DD+I DD G+G
Sbjct: 10 TLQQLKEARKTGRNVNVVESDTDDYNEIYDEVDEDTY--RQHKRNQLMNDDFIVDDNGEG 67
Query: 114 YVEDGREIFDDD-----IEDVPQKKEKHDKRKKNKNIQNPNAK-GDIQKLLANMPVKKKK 167
YV++G + +DD D + KR+K ++ AK I+ M
Sbjct: 68 YVDNGADDWDDASRPNYYSDEENESMGSRKRRKKEDKTTKVAKTSQIRNFFKPMSGVSDS 127
Query: 168 KEEVQLNNDDVLADLLSEV----NTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFS 223
K++++ N DD+L D ++ N A + +N + N I K++ L N
Sbjct: 128 KKKLETNIDDILNDFGDDLDKKKNIPKAFSNSINKEVNNHNINKKK---------LKNTF 178
Query: 224 KPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWD 283
+K +K K L S+D M+++ +++P + + +
Sbjct: 179 SFSTSTRKTDKTTPK----LDAFNASSDYTMDID-----NFEDQPSSPFKLKSEVTPEAE 229
Query: 284 NSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHK 343
++ D P + E E++++Q E+ D + + + S P VV+K +
Sbjct: 230 TEKENIDPEPTKNVFENPSESLKNQ--EKVNDNDDEDDSDDDIVYSRKPRAAVVKKNQVD 287
Query: 344 CAEWEAIQTEPST--SEPQVHSRTADDSLPLATDH--ENKKVFRMFFLDAFEDIYKQPGT 399
PS+ S+P V+++ ++ + ++ D+ + F+MF+ D E +
Sbjct: 288 TVSAVKANQLPSSPISKP-VYTKFSNHTEKVSKDNIKDTSDSFKMFWFDYAE----AENS 342
Query: 400 VYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR------SEHLKTKEPVSIAQVYSEFD 453
+ LFGK+ KE S V V I R+++ LPR E K+K+ +I +
Sbjct: 343 LLLFGKIMTKEG-KLVSGVVKVDGICRELFFLPREYRIVDDEEDKSKKLTAIDVLEEIQP 401
Query: 454 QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV----RYSAKCPALPSDLSGDTFSH 509
+ Y + + +++ KKYAF L +P +EYL+V +P+++ G TF H
Sbjct: 402 LLLANYNLEELRAKPEVKKYAFELADIPKEAEYLKVLLPFNNETNRNIMPANIEGSTFRH 461
Query: 510 VFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQMEKI 560
VFGT ++ E+ +++R I GP WLE + S C+ EV ++ +I
Sbjct: 462 VFGTNANMFESFIMQRNIMGPCWLEIRGGDFDAMQNASHCQVEVVVDRPSQI 513
>gi|134056299|emb|CAK37532.1| unnamed protein product [Aspergillus niger]
Length = 1464
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/647 (39%), Positives = 376/647 (58%), Gaps = 35/647 (5%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K K E+ E + +
Sbjct: 778 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSKLLKAEEKMQEGDDDESA 837
Query: 622 KKAAYS---GGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
K GGLV EP+KG YDKFI++MDFNSLYPSIIQEYNICFTT+ D+D
Sbjct: 838 DKKKKDKYKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEYNICFTTVERTATADNDKEE 897
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 898 KVPEVPTSDQEQGILPKLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 957
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 958 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTIS 1017
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G++ K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1018 DALKVGDEFKKSVNERYRLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDKLEVKG 1076
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L + + L +H++++++ + VP+
Sbjct: 1077 LDMKRREYCSLSKEVSQKLLNEVLSGEDQ-----EVVLNRVHDYLRELAEKMREFSVPVQ 1131
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE---DGTSEAA 975
I +L+K PEEY +++++P VQVALR K ++ D ISY++ + +S A
Sbjct: 1132 KYVIYTKLSKRPEEYPNKESMPPVQVALR-ELARGKSVRPNDVISYVVTNGDAETSSLAP 1190
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y +++ +K +S LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1191 AKRSYTLQDVMKPDSGLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQ 1250
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV 1092
Q +I + + V+++ + TC CK+ + E + STH
Sbjct: 1251 INSSSGSNQQNADIFPLESQIPDSVRFENATRLTLTCR--FCKEKSVFEGLAQ-STHMCT 1307
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR------ 1146
C N C+ P++ L ++ +L + KYYEGWL C+D C + TR
Sbjct: 1308 ANGIICPNQACQ-KPFSVL-TIVAQLEAQIRAQTSKYYEGWLVCDDTACGNRTRQISVYG 1365
Query: 1147 -RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC LG + C Y+ Y+E Q+Y QL +F + D+ KA
Sbjct: 1366 HRC-LGPRGHAEGCLGRMTYE----YSEKQMYNQLLYFAGLWDVDKA 1407
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 253/547 (46%), Gaps = 83/547 (15%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE ++YEEV ++ Y + + R +DD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEVEEQGDIYEEVDDEGYKKIIRNRLDQDDFVVDDNGEGYA 65
Query: 116 EDGREIFDDDIED----------VPQKKEKHDKRKKNKNIQNPNAKGDIQKLL--ANMPV 163
+DGRE++++ D +P + + ++++ + + I K P
Sbjct: 66 DDGREVWNERTADYGDSESEDDELPARGKAAKRKREEEKQRQEKINNGISKYFNSGAAPS 125
Query: 164 KKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFS 223
K K +D +ADLL EV+T + P T IV K E A+ + S
Sbjct: 126 APKPKPVATAEDDAFMADLLGEVDTNVVPH---RVPTRNIV--KTE-----ARRKVRILS 175
Query: 224 KPIKVEKKIEKPIKKEP-----SPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQ 278
P+ + E+PIKK+ SP+KD+ E+N + DDG M
Sbjct: 176 PPLADRTRKERPIKKDENSDPVSPVKDQ---------PELNFDD-------DDGALPGMD 219
Query: 279 IDD------WDNSQQTQDVLPEQAKVELQIEAIES--QSIEEKVDVT--NVESVSSAVEL 328
DD +S ++ V + +++E + I E VT N +S
Sbjct: 220 DDDVPMSDPMPSSPISKAVERKSTTTPVKVEEFDDDDNDIMEIAQVTGQNDAKATSINMA 279
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEP----STSEPQVHSRTADDSLPLATDH-------- 376
+ PPP++ KKE A + T+P S V S+ S P +++
Sbjct: 280 GSRPPPKL--KKESTPALASSSPTKPMPEVDASWNDVRSKLNVLSSPASSEMRSFGKLRA 337
Query: 377 ----ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
E RMF+LD F ++ G++ LFGKV K+N S++S V V NI RK+Y LP
Sbjct: 338 QDVVEEDGSLRMFWLD-FTEVN---GSLCLFGKVKNKQNGSYASAFVKVDNILRKLYFLP 393
Query: 433 RSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
R K T E V + VY E D + ++ ++ K + +KYAF LPGVP +EYL+
Sbjct: 394 REYRHKNGRETDEEVDMEDVYHEVDGMMSRLRVGMHKMKPCTRKYAFELPGVPKETEYLK 453
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISW 547
+ Y LP D+ G+TFSHVFGT +S E +L + I GP WL+ EA+ + SW
Sbjct: 454 LFYPYDKSPLPMDVKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIEEADFTAVNNASW 513
Query: 548 CKYEVQC 554
CK+E Q
Sbjct: 514 CKFECQA 520
>gi|296813443|ref|XP_002847059.1| DNA polymerase alpha catalytic subunit [Arthroderma otae CBS 113480]
gi|238842315|gb|EEQ31977.1| DNA polymerase alpha catalytic subunit [Arthroderma otae CBS 113480]
Length = 1463
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 263/655 (40%), Positives = 382/655 (58%), Gaps = 44/655 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN+ GN SRTL G R+ERNE++LLH F+ Y+ PDK K + + EE E + +
Sbjct: 780 LTNLAGNSWSRTLSGTRAERNEYILLHEFYRGKYICPDKYGQKTQIKVEENEEEDGIDKK 839
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCE 681
KK Y GGLV EP+KG YDK +++MDFNSLYPSIIQEYNICFTT+ ++D
Sbjct: 840 KKEKYKGGLVFEPEKGLYDKHVLVMDFNSLYPSIIQEYNICFTTVDRHASSENDREESVP 899
Query: 682 YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGC 741
+P+ GILP I LV RR+VK LMK N + + L +D +Q ALKLTANSMYGC
Sbjct: 900 EVPDSSQALGILPRLIATLVNRRREVKKLMKNKNATPEELALWDTKQLALKLTANSMYGC 959
Query: 742 LGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVF 801
LG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ N ++
Sbjct: 960 LGYTQSRFYARPLAMLTTFKGREILRNTKELAETNQLRVIYGDTDSVMINTNTDNVQEAL 1019
Query: 802 KIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDV 861
K+GN+ K N+ Y+ LE+DID V+K +LL KKKYAA+++S++ +G + E+KG+D+
Sbjct: 1020 KVGNEFKRLVNQRYRLLEIDIDNVFKRLLLHAKKKYAAINLSEV-DGTYVEHLEVKGLDM 1078
Query: 862 VRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVPLT 918
RR++ L+ E ++ +IL S DD L IH++++++ + +P+
Sbjct: 1079 KRREFCALSKEVSTKLLHEIL--------SGDDVEIVLNKIHDYLRELAQKMHEYAIPVQ 1130
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT-- 976
I +L+K P+EY +++ +P QVALR K ++ D ISYI+ G +E ++
Sbjct: 1131 KYVIYTKLSKKPDEYPNKETMPPAQVALR-ELARGKSVRPNDVISYIVTT-GDAETSSLP 1188
Query: 977 --QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+R+Y +++ +K +S LK DV +YL +QI P + RL PI GTDA R+AECLGLD Y
Sbjct: 1189 PAKRSYTLQDVIKTDSGLKPDVEFYLLKQIFPPIERLCAPIPGTDAARLAECLGLDVRKY 1248
Query: 1034 R--SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA--PTR--LS 1087
+ S Q++E L + ++++ + C C++ E +R S
Sbjct: 1249 QISSNTAHGQQETELCALESQIPDSIRFEKAARLNLKCR--FCQKTIIFEGLIGSRDICS 1306
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
+G+V C +P C +T + +I +L + +YYEGWL C+D C + TR
Sbjct: 1307 PNGIV-----CPDPAC-AKTFTVI-SIIAQLESQIRAQTAQYYEGWLVCDDSACGNRTRQ 1359
Query: 1147 ------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSD 1195
RC LG + R C ++H YTE QLY QL +F + D+ KA T ++
Sbjct: 1360 MSVYGQRC-LGPRGR-AEGCLG-RMHYEYTEKQLYNQLLYFAGLWDVEKAKTMAE 1411
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 260/553 (47%), Gaps = 76/553 (13%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE DE++YE+V E+ Y + V KR DD++ DD G+GY
Sbjct: 5 AKLAELRALRASGQKRLATYEVQEDEDIYEQVDEEGYKKVVRKRLDRDDFVVDDNGEGYA 64
Query: 116 EDGREIFDD--------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKK 167
+DGRE +DD D + +P + + ++++ +N + I K K+
Sbjct: 65 DDGREEWDDTRHVASESDSDGLPVRGKAAKRKREEENQRKEKIANGINKYFTATLTKQTS 124
Query: 168 KEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKP 225
K + DD LAD+L +V T+ P+ K + K + I E + + S P
Sbjct: 125 KPKPVATADDEAFLADILGDVETSTIPS-KAHVKKS---IKSE------TRRKVRIVSPP 174
Query: 226 IKVE---KKIEKPIKKEPSPLKD-----EIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQM 277
+++ KK E ++ + +P KD ++ +D ++ + A S++ + +
Sbjct: 175 FQLKPRVKKAENELENDRTPSKDHSALDDVLEDDGFIDSGNDDAIMSEQPLPSSPVANAV 234
Query: 278 QIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVV 337
+ + S+ Q+++ ++ ++++ + + V S + PPP++
Sbjct: 235 ERKTANASKSRQEIIKKEEDDVDDDMIDVAEAVAD-----HSAHVPSVDMVGKRPPPKI- 288
Query: 338 EKKEH-----------------KCAEWEAIQTE-----PSTSEPQVHSR-TADDSLPLAT 374
KKE + W + ++ S SE Q + TA D++
Sbjct: 289 -KKEVYDDPMASSPARATTEMINPSSWNDVTSKLNVLNSSVSEMQRFGKLTAQDAV---- 343
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
E R F+LD E G++ LFGKV K N+S+ S V V NI RK+Y LPR
Sbjct: 344 --EEDDSLRFFWLDYTE----VNGSLCLFGKVKNKANDSYVSAFVKVDNILRKLYFLPRE 397
Query: 435 EHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
+ T E V + VY E D+I ++ K+ K + +KYAF LP +P +EYL++
Sbjct: 398 YKYRRGQTTDEEVDMEDVYGEVDEIMSRSKVEMHKIKPCTRKYAFELPDIPKETEYLKLM 457
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCK 549
Y PALP DL G+TFSHVFGT ++ E +L + I GP WL+ +A+ + SWCK
Sbjct: 458 YPYTKPALPMDLKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTAVNGASWCK 517
Query: 550 YEVQCNQMEKIRI 562
E Q + +I +
Sbjct: 518 LECQVSNPAEISL 530
>gi|189205368|ref|XP_001939019.1| DNA polymerase alpha catalytic subunit A [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187986118|gb|EDU51606.1| DNA polymerase alpha catalytic subunit A [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1472
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 286/730 (39%), Positives = 412/730 (56%), Gaps = 63/730 (8%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN RTL G R+ERNE++LLH FH+ Y+ PDKQ+GK
Sbjct: 762 IAAISIKVQMLPLTKV-LTNLAGNSWGRTLSGTRAERNEYILLHEFHKNKYICPDKQWGK 820
Query: 605 NKKE--GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNIC 662
+K + E +KK + GGLV EP+KG YDKFI++MDFNSLYPSIIQE+NIC
Sbjct: 821 SKAKVDEEAAEGEEGADAKKKDKFKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEFNIC 880
Query: 663 FTTIPVRMLQDSDITTLCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDL 720
FTT+ + SD++ + +PE D GILP I LV RR+VK LMK + +SD
Sbjct: 881 FTTV-----ERSDLSEDDDKVPEVPTDQQQGILPRLIATLVSRRREVKKLMKAKDATSDQ 935
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEV 780
L +DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL TK + E V
Sbjct: 936 LATWDIKQMALKLTANSMYGCLGYTKSRFYARPLAMLTTYKGREILRKTKDMAEVKALRV 995
Query: 781 IYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL 840
IYGDTDS+MI+ NV++ K+GN+ K E N YK LE+DID V++ +LL KKKYAA+
Sbjct: 996 IYGDTDSVMINTNVDNIQDALKLGNEFKREVNDSYKLLEIDIDNVFRRILLHAKKKYAAI 1055
Query: 841 SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ + +GK I E+KG+D+ RR++ L+ E +++ +L + + ++ IH
Sbjct: 1056 NMVPV-DGKYIEKLEVKGLDMRRREYCALSKETSTELLNFLLSGEDP-----EVVVEKIH 1109
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
H++++ + +P I QL K P+EY + ++P VQVALRL + K +K D
Sbjct: 1110 NHLRELSKQMREYAIPARKYTIYTQLGKNPKEYPNGGSMPAVQVALRL-QSKGKLVKAKD 1168
Query: 961 TISYIICED--GTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+S+II + G++E A + A+ ++E LK +S LK D++YYL +QI P V RL PI GT
Sbjct: 1169 VMSFIITGESSGSAENAAKNAFPVDEVLKPDSGLKPDIDYYLHKQILPPVERLCAPISGT 1228
Query: 1018 DAVRIAECLGLDTSLYR-SQIKESIQQSEE-NILGVGEAEEVKYQFCDKFEFTCMNPSCK 1075
+ +A CLGLD+S YR S + S QQ E + L + V++Q C C +C
Sbjct: 1229 NITLLAACLGLDSSKYRVSTVSGSAQQDTEIHPLESQIPDSVRFQSCSPLWLRCR--TCT 1286
Query: 1076 QVNTVE-----APTRLSTHGVVFVLDECINPECKVPPYTYLPHL--INKLSQDMNKYIVK 1128
V + +PT LS + +C P C T +P++ + +L + + +
Sbjct: 1287 TVFPFQGLASTSPTTLSLQTISHNGIQCPAPTCG----TIIPNITVVAQLESAIRQILAT 1342
Query: 1129 YYEGWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLS 1179
YY G + C+DP CS+ TR RC P GL R C K+ V E ++ QL
Sbjct: 1343 YYAGHVVCDDPQCSNRTRSISVYGHRCLGPKGL-ARDCLG----KMSYVVKERDVWNQLL 1397
Query: 1180 FFHYICDI-------------TKALTKSDTPSIKFDSETYM-GYCKMKQHVERFLESSAY 1225
+F + D+ KA IK +E + +K VE++LE +
Sbjct: 1398 YFASLFDVDRVGKDVGGGSAGVKAEEMERREKIKVLAEVNRERFGTLKGVVEKWLERNGR 1457
Query: 1226 NIVDLKKLFS 1235
V + LFS
Sbjct: 1458 QWVQMDSLFS 1467
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 163/582 (28%), Positives = 246/582 (42%), Gaps = 93/582 (15%)
Query: 76 YEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVEDGREIFDDD--------- 125
YE +E +Y+ V E+ Y + V R EDD++ D G+GYV+DGRE +DDD
Sbjct: 30 YEVAEEEQLYDTVDEEGYKKIVRGRLDEDDFVVGDEGEGYVDDGREEWDDDQGKYHYAAT 89
Query: 126 ---IEDVPQK-KEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNND-DVLA 180
E+ P K K KR++++ + KG + A K K + V D D +
Sbjct: 90 DSEGEERPAKGKAAKRKREEDEEKRKKIDKGISKYFNAKNAAKAPKAKPVATEADKDFMN 149
Query: 181 DLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKK-----IEKP 235
DLL E++T PA ++ + +PIK E + + P
Sbjct: 150 DLLGEIDTN---------------------PARSSSSRM----RPIKTEARRKTRVLSPP 184
Query: 236 IKK-EPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPE 294
I + P+ K +D+ M + DDGL DD S P
Sbjct: 185 ISENRPAATKRRTDDSDAYMP---DTPPALNAHADDDGL--PTFDDDIAMSDPPLPSSPV 239
Query: 295 QAKVELQIEAIESQSIEEK---------------VDVTNVESVSSAVELST-SPPPQVVE 338
VE + + + Q EE V N+ +L +P P
Sbjct: 240 TKAVERRTQPVVKQEEEEDDLMEIAQPTTHHGVPVASVNMAGRRPIAKLKEENPTPANSS 299
Query: 339 KKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKV-----FRMFFLDAFEDI 393
A ++A TS+ V S A + + V R F++D E
Sbjct: 300 PVGPSTASFDASSWSDVTSKLNVMSSPAPQNTGIGKMEPQDAVEEDGSLRFFWIDYTE-- 357
Query: 394 YKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS-EHLK---TKEPVSIAQVY 449
G++ LFGKV + ++SSC V V NI RK+Y LPR H++ T E V ++ V
Sbjct: 358 --INGSLCLFGKVKNNKTGNYSSCFVKVDNILRKLYFLPREYRHVRGVATDEEVGLSDVS 415
Query: 450 SEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSH 509
E D I +++++ K + +KYAF LP +P ++YL++ Y L SDL G+TFSH
Sbjct: 416 DEVDSIMSKHRVNLHKIKPCTRKYAFELPDIPKEADYLKLLYGYDKMPLSSDLKGETFSH 475
Query: 510 VFGTKSSFLENLLLERKIKGPSWLEF--PEAEKFPSRISWCKYEVQCNQMEKIRITNVCG 567
VFGT +S E +L + I GP WL+ P+ S SWCK EV ++ I + +
Sbjct: 476 VFGTNTSLFEQFVLWKNIMGPCWLKIDNPDFGSL-SNASWCKLEVLVSKPNNIAVMSASD 534
Query: 568 NV---------LS-RTLMGGRSERNEFLLLHAFHEKSYVLPD 599
N+ LS RT + + E L+ A ++ L D
Sbjct: 535 NLDAPPMTLMSLSLRTTFNAKDNKQEILMASAMIYDNFSLTD 576
>gi|380481728|emb|CCF41675.1| DNA polymerase, partial [Colletotrichum higginsianum]
Length = 1058
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 281/674 (41%), Positives = 393/674 (58%), Gaps = 49/674 (7%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ +
Sbjct: 399 ITALALQVQLLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQTFR 457
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+ EE + ++G+G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICFT
Sbjct: 458 GRMAQEEN-QDDEGEGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICFT 516
Query: 665 TIPVRML-QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
T+ L QD D +P+ Q D GILP I LV R+QVKALMK S D L
Sbjct: 517 TVDRSALEQDEDAV---PEVPKDQ-DQGILPRLIATLVNRRKQVKALMKDKGASQDQLAT 572
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYG 783
+DI+Q+ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ +VIYG
Sbjct: 573 WDIKQQALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESNQLQVIYG 632
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
DTDS+MI+ NV + FK+G + K N+ Y+ LE+DID V++ +LL KKKYAA+++
Sbjct: 633 DTDSVMINANVENVSDAFKVGQEFKKAVNERYRLLEIDIDNVFRRILLQAKKKYAAINLV 692
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ +GK I E+KG+D+ RR++ L+ E + S+IL+E D + + + IHE++
Sbjct: 693 Q-KDGKFIEQMEVKGLDMKRREYCGLSKE----ISSKILNEILSGDET-EKSIARIHEYL 746
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTIS 963
+ I + +P I QL KAP EY + ++P VQVALR K +++GD IS
Sbjct: 747 RDISGKMREQAIPTQKYIIFTQLGKAPTEYPNADSMPQVQVALR-EIAKGKNVRRGDVIS 805
Query: 964 YIICED-GTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
YII D +S+ A +RA+ + +K +S L DV +YL +QI P V RL I GT + +
Sbjct: 806 YIITGDPQSSDPAPKRAFTPPDVMKADSGLSPDVEWYLGKQIFPPVERLCANIVGTSSSQ 865
Query: 1022 IAECLGLDTSLYRS----QIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQV 1077
+AECLGLD Y+S Q S E + L ++V++ C + C CK
Sbjct: 866 LAECLGLDIRRYKSVQDQQHGGSSNDVEIHPLESQIPDDVRFAECARLSLRCRK--CKAS 923
Query: 1078 NTVEA----PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGW 1133
+T E P R+S GV+ P C T ++ +L + +YYEGW
Sbjct: 924 STFEGLLAQPDRVSASGVL------CGP-CGATISTL--SIVAQLEHALRTQTARYYEGW 974
Query: 1134 LKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYI 1184
L C+D C TR RC P GL R C +Y+ YTE +Y QL ++ +
Sbjct: 975 LVCDDSACGMRTRQMNVYGTRCLGPKGL-ARDCLGRMRYE----YTEKAIYNQLVYYASL 1029
Query: 1185 CDITKALTKSDTPS 1198
++ KA K+ S
Sbjct: 1030 WNVDKAKAKASAES 1043
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 36/226 (15%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKT-KEP 442
MF+ D + D+ G++ LFGKV K+ + SC V V NI RK++ LP + + K P
Sbjct: 1 MFWTD-YTDV---NGSLCLFGKVLNKKTGLYVSCFVKVDNILRKLFFLPAKQKYRAEKTP 56
Query: 443 VSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDL 502
+++ +K + +KYAF LPG+P +EYL+ Y P +
Sbjct: 57 MNVGM----------------YKIKACTRKYAFELPGIPKETEYLKCLYPYTKPVIDGSA 100
Query: 503 SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQMEKI 560
+G+TFSHVFGT ++ E +L + I GP WL+ +A+ F + S CK EV +
Sbjct: 101 TGETFSHVFGTNTALFEQFVLWKNIMGPCWLKITDAD-FGALKNASHCKLEVLVEHPNMV 159
Query: 561 RITN-----------VCGNVLSRTLMGGRSERNEFLLLHA-FHEKS 594
N +++ RT ++ + E L + A +EK+
Sbjct: 160 STLNESTDNLDAPPLTLMSLVLRTAFNAKANKQEILAISARIYEKA 205
>gi|414879514|tpg|DAA56645.1| TPA: hypothetical protein ZEAMMB73_505723 [Zea mays]
Length = 1528
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 281/708 (39%), Positives = 397/708 (56%), Gaps = 103/708 (14%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-------KEGEETG 613
++TN+ GN+ +TL G R++R E+LLLH+FH + ++ PDK + +NK K +TG
Sbjct: 805 QLTNISGNLWGKTLQGARAQRVEYLLLHSFHARKFIAPDK-FARNKELNSTKRKMNPDTG 863
Query: 614 EAN------------------KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
AN + K RK +Y+GGLVLEPKKG YDK+++L+DFNSLYPSI
Sbjct: 864 GANADDGAADPSVDDEVHNGDQSKARKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSI 923
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN 715
IQE+NICFTT+ + SD + LP +V TG+LP ++ LVE RR VK+ +K
Sbjct: 924 IQEFNICFTTVE----RSSDGSV--PNLPASKV-TGVLPELLRSLVERRRMVKSWLK--T 974
Query: 716 LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE- 774
S Q+DI+Q+ALKLTAN RF+A+PLA L+T +GREIL NT LV+
Sbjct: 975 ASGLKKQQFDIQQQALKLTAN-----------RFYAKPLAELITLQGREILQNTVDLVQN 1023
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSE----------------CNKLYKQL 818
NLN EVIYGDTDS+MI ++D I ++ E NK Y+ L
Sbjct: 1024 NLNLEVIYGDTDSIMIHTGLDDISRAKAIAGKVIQEMCKLKKDGLTKNASIQVNKKYRCL 1083
Query: 819 ELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVI 878
E+D+DG+YK MLLLKKKKYAA+ ++ +G + + E KG+D+VRRDWS L+ + G F +
Sbjct: 1084 EIDLDGIYKRMLLLKKKKYAAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKDIGDFCL 1141
Query: 879 SQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA 938
QIL + + DD +++IH + +++ + +G + L ITK LTKAPE+Y D K
Sbjct: 1142 KQIL-----SGGTCDDVVESIHSSLVQVQEQMRSGQIELEKYVITKSLTKAPEDYPDAKN 1196
Query: 939 LPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA-----TQRAYNIEELKNN-SKLK 992
PHVQVALRL GDT+ YIIC S+ A QRA + EELK + K
Sbjct: 1197 QPHVQVALRLKQNGYSGCSAGDTVPYIICSQQDSDNAHSVGIAQRARHPEELKRDPDKWM 1256
Query: 993 IDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQ-SEENILGV 1051
ID++YYLSQQIHPVV+RL I+GT R+AECLGLD++ ++ ++ ES Q + +L V
Sbjct: 1257 IDIDYYLSQQIHPVVSRLCASIQGTSPARLAECLGLDSAKFQPRLTESSNQDTSMMLLSV 1316
Query: 1052 GEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECIN----------- 1100
+ E+ +Y+ C+ +C PSC + L T + + I
Sbjct: 1317 IDDEDERYRGCEPLRLSC--PSCSGTFDCPPVSSLITSASATSVSDPIEGKDATANFWRH 1374
Query: 1101 ---PEC--KVPPYTYLPHLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL-- 1152
P C + P ++ N++ + + +I YY+G C+D GC T L +
Sbjct: 1375 MRCPRCLDNTVESKFSPSMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSVNLRVMG 1434
Query: 1153 KTRLCTTCHKY-----KLHRVYTELQLYQQLSFFHYICDITKALTKSD 1195
+ T C Y +L R Y E LY+QLS+F Y+ D T+ L K D
Sbjct: 1435 DSERGTVCPNYPRCNGRLVRQYKESDLYRQLSYFCYVLDATRCLEKLD 1482
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 114/218 (52%), Gaps = 26/218 (11%)
Query: 384 MFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKT--- 439
+ LDA+E+ + GTVYLFGKV V + SCCVIV+NI R IY +P
Sbjct: 344 FYILDAYEEPFGANSGTVYLFGKVEVGKQ--FHSCCVIVKNIQRCIYAIPNRSVFPMDSI 401
Query: 440 ----KEPVS--IAQVYSEFDQIATQYK-----------ILDFKSRKIEKKYAFNLPGVPD 482
+ P + + + + ++A+ K + +F +++ YAF +P+
Sbjct: 402 SGIERNPTADLLPSLRATLHELASGLKSEIADKLSDLNVSNFIMTPVKRNYAFERTDLPN 461
Query: 483 LSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
+Y L++ Y K PALP+DL G+ F + GT +S LE L++RK+KGPSWL +
Sbjct: 462 GEQYVLKINYPYKDPALPADLRGEHFHALLGTNNSALELFLIKRKVKGPSWLSVSKFVTR 521
Query: 542 PS--RISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGG 577
PS R+SWCK+EV + + I + N+ T++ G
Sbjct: 522 PSTQRVSWCKFEVTVDCPKDISVLTTSTNLEVPTVVVG 559
>gi|443924593|gb|ELU43591.1| DNA polymerase alpha catalytic subunit, putative [Rhizoctonia solani
AG-1 IA]
Length = 1321
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 273/678 (40%), Positives = 383/678 (56%), Gaps = 79/678 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG--------EET 612
++TN+ GN ++TL GGR+ERNE++LLH FH YV PDK + K +E
Sbjct: 665 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYVPPDKTWAKKSGAAAAKAEVVDDEG 724
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
G A K+ Y GGLV EPK+G +DK+I++MDFNSLYPSIIQEYNI FTT V
Sbjct: 725 GAAPVAAKSKRDKYKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTT--VDKSD 782
Query: 673 DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
D +P+ + G+LP I LV RRQVK LMK + L+Q+DI+QKALK
Sbjct: 783 DDSGEVKIPAIPDSGIPQGVLPRLIATLVNRRRQVKNLMKDRTATQAQLVQWDIKQKALK 842
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
LTANSMYGCLGF +SRF+A+PLAAL T KGREIL +T+ L ENL+ +VIYGDTDS+ ++
Sbjct: 843 LTANSMYGCLGFEHSRFYARPLAALTTFKGREILTHTRELAENLSLDVIYGDTDSIFVNS 902
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
NV D KI N++K N Y+ LE+D+DG+++ MLLL+KKKYAA+ + +++
Sbjct: 903 NVTDLPDALKIANELKKAVNDRYRLLEIDLDGIFRRMLLLQKKKYAAVKVEEMN----AS 958
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTD 909
S EIKG+D+ RR++ +++ QIL S DD ++ IHE+++ + +
Sbjct: 959 SVEIKGLDMKRREYCI-------YILDQIL--------SGDDAETVVERIHEYLRWMGEN 1003
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-- 967
+ G V + + K+L KAPE+Y +LPHV VA R+ + GD I YI C
Sbjct: 1004 IRGGKVDMDDFIVFKRLGKAPEDYPKDNSLPHVHVAKRMKERGGHA-RIGDVIPYIFCLG 1062
Query: 968 EDGTSEAATQ--RAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
DGTS Q RA++ +EL K +S+LKID YY++QQI P V RL +PIEGTD R+AE
Sbjct: 1063 GDGTSVKTGQADRAFHPDELRKTDSELKIDFEYYIAQQILPPVERLCDPIEGTDRARLAE 1122
Query: 1025 CLGLDTSLYR---SQIKESIQQSEENILGVGEAEEVKYQF---CDKFEFTCMNPSCKQVN 1078
CLGLD S ++ I + ++ ++ + E QF C K + + + PS V
Sbjct: 1123 CLGLDPSRFQVSVGVIDDDPYRTLDSQIPDKERFREAAQFTVKCRKCQGSTVFPS---VG 1179
Query: 1079 TVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCED 1138
+ EAP +++ GV C P C L + +L + + I YY GW+ CED
Sbjct: 1180 SPEAPV-ITSAGV-----RC--PGCS--EELTLASIQVQLETQLRQQINNYYSGWMICED 1229
Query: 1139 PGCSDLTRRCPLGLKTRLCTTC-------------------HKYKLHR---VYTELQLYQ 1176
C TR + K L C ++ LH Y++L+LY
Sbjct: 1230 ATCGHRTRGMSVYGKRCLNPGCTAKDPMSYEVCNDGFTWASDQWCLHSKFPQYSDLKLYN 1289
Query: 1177 QLSFFHYICDITKALTKS 1194
QL ++ + D KA+ K+
Sbjct: 1290 QLLYYASLFDGHKAIEKA 1307
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 332 PPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKV-----FRMFF 386
P + V+ K E A + +EP+ T P H+ K + RMF+
Sbjct: 229 PKVEPVDTKPPAWLELHASLNASAVTEPE----TLGSDKPGTISHDVKALEEDGSLRMFW 284
Query: 387 LDAFEDIYKQPGTVYLFGKVFVKENNSH-----SSCCVIVQNIDRKIYLLPRSEHLKTKE 441
LD E +YL GKV K ++ +SCCV ++ I+R +++LPR ++
Sbjct: 285 LDYLE----LDSRLYLVGKVIDKAQSTEKVTKWASCCVAIEGIERNLFVLPRKYRMEFGH 340
Query: 442 PVSIA----QVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDL-SEYLEVRYS 492
A VY EFD++ + I + ++ + + YAF P +P+ S++++V Y
Sbjct: 341 ETDTAPTEDDVYDEFDRVRQKNGIKKWAAKFVTRSYAFGEPDIPEGESQWMKVLYG 396
>gi|212543673|ref|XP_002151991.1| DNA polymerase alpha catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
gi|210066898|gb|EEA20991.1| DNA polymerase alpha catalytic subunit, putative [Talaromyces
marneffei ATCC 18224]
Length = 1464
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 251/651 (38%), Positives = 375/651 (57%), Gaps = 44/651 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK + K EE + +
Sbjct: 780 LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKYSNRQLKALEEKVDDDDDSTD 839
Query: 622 KKAAYS--GGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
KK GGLV EP+KG YD+++++MDFNSLYPSIIQE+NICFTT+ +++
Sbjct: 840 KKKKEKYKGGLVFEPEKGLYDRYVLVMDFNSLYPSIIQEFNICFTTVDRSSTAENENEEQ 899
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P + GILP I LV RR+VK LMK +++ L +D +Q ALKLTANSMY
Sbjct: 900 VPEVPSSDQEQGILPRLIANLVTRRREVKKLMKDKRATTEQLALWDTKQMALKLTANSMY 959
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 960 GCLGYTQSRFYARPLAMLTTFKGREILRSTKDLAESKQLRVIYGDTDSVMINTNMDTISD 1019
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
K+G + K+ N+ YK LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+
Sbjct: 1020 ALKVGEEFKASVNERYKLLEIDIDNVFRRLLLHAKKKYAAINMTEI-DGKYVDKLEVKGL 1078
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+ RR++ L+ E K ++ +IL + + L +H++++ + + +P+
Sbjct: 1079 DMKRREYCALSKEVSKRLLDEILSGEDS-----EVVLNKVHDYLRDVTAQMKEYKIPVQK 1133
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT--- 976
I +L+K PEEY +++++P QVALR K ++ D I+YI+ G SE A
Sbjct: 1134 YVIYTKLSKRPEEYPNKESMPPAQVALR-EIARGKTIRPNDVIAYIVT-SGDSETANLPP 1191
Query: 977 -QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y +++ +K +S+LK D+ YYL +QI P + RL PI GTD VRIAECLGLD Y+
Sbjct: 1192 PKRSYTLQDVMKPDSELKPDIEYYLLKQIFPPIERLCAPIPGTDPVRIAECLGLDVRKYQ 1251
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVE----APTRLST 1088
S Q + I + + ++++ + C + C + + E +P S
Sbjct: 1252 INTSRSNSQQDAKIYPLESQIPDSIRFEHSARLSLRCRH--CGESSVFEGLSSSPRMCSP 1309
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-- 1146
HGVV + C N + ++ ++ + KYYEGWL C+D C + TR
Sbjct: 1310 HGVVCPNEACANVFSTI-------SIVAQVESQIRAQTAKYYEGWLVCDDSSCGNRTRQM 1362
Query: 1147 -----RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC LG + R C Y+ YTE Q+Y QL +F + D+ KA
Sbjct: 1363 SVYGHRC-LGPRGRAEGCLGRMNYE----YTEKQMYNQLLYFAGLWDVDKA 1408
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 383 RMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK---- 438
+ F+LD E G++ LFGKV K+ S+ S V V NI RK++ LPR +K
Sbjct: 351 QFFWLDYTE----VNGSLCLFGKVKNKKTGSYVSSFVKVDNILRKLFFLPRENRVKNGHV 406
Query: 439 TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPAL 498
T E V + VY E D + T+ K+ K + +KYAF LP +P +YL++ Y P L
Sbjct: 407 TDEEVDMEDVYEEVDGMMTKLKVGMHKIKPCTRKYAFELPNIPKEGDYLKLLYPYDKPVL 466
Query: 499 PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQM 557
P D +G+TFSHVFGT ++ E +L + + GP WL+ EA+ + SWCK+E Q ++
Sbjct: 467 PMDTTGETFSHVFGTNTALFEQFVLWKHVMGPCWLKIGEADFSAATNASWCKFECQVSKP 526
Query: 558 EKI 560
I
Sbjct: 527 NTI 529
>gi|19115098|ref|NP_594186.1| DNA polymerase alpha catalytic subunit [Schizosaccharomyces pombe
972h-]
gi|118833|sp|P28040.1|DPOA_SCHPO RecName: Full=DNA polymerase alpha catalytic subunit; AltName:
Full=DNA polymerase I
gi|5009|emb|CAA41232.1| DNA polymerase catalytic subunit alpha [Schizosaccharomyces pombe]
gi|2662027|emb|CAB16598.1| DNA polymerase alpha catalytic subunit [Schizosaccharomyces pombe]
gi|227842|prf||1712310A DNA polymerase
Length = 1405
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 271/697 (38%), Positives = 388/697 (55%), Gaps = 40/697 (5%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +++Q Q+ K +TN+ GN +RTL G R+ERNE++LLH F + Y++PDKQ
Sbjct: 742 IAAVAFKIQMLQLSK-NLTNIAGNSWARTLTGTRAERNEYILLHEFKKNGYIVPDKQQSI 800
Query: 605 NKKE---GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
+ G E G + G+KK Y GGLV EP+KG Y+ I++MDFNSLYPSIIQEYNI
Sbjct: 801 RRHAEAFGAEDGLQEESLGKKKDKYKGGLVFEPQKGLYETCILVMDFNSLYPSIIQEYNI 860
Query: 662 CFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
CFTT+ R +SD P + GI P I LVE RRQ+K L+K + +
Sbjct: 861 CFTTVD-RSPSNSDSDDQIPDTPSASANQGIFPRLIANLVERRRQIKGLLKDNSATPTQR 919
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVI 781
+Q+DI+Q+ALKLTANSMYGCLG+ SRF+A+PLA L+T KGRE L+NTK L + + +VI
Sbjct: 920 LQWDIQQQALKLTANSMYGCLGYTKSRFYARPLAVLITYKGREALMNTKELADQMGLQVI 979
Query: 782 YGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
YGDTDS+M++ NV D + +IGN+ K + N+ Y +LE+DID VY+ MLL KKKYAAL
Sbjct: 980 YGDTDSVMLNTNVTDKNHALRIGNEFKEKVNERYSKLEIDIDNVYQRMLLHAKKKYAALQ 1039
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ S GK + ++KG+D+ RR++ LA EA KF + QIL + + ++NIH
Sbjct: 1040 LD--SQGKP--NLDVKGLDMKRREFCTLAKEASKFCLDQILSGE-----LTETVIENIHS 1090
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
++ + NG P I +L K PE+Y + K +P VQVAL+ + ++ GD
Sbjct: 1091 YLMDFSEKMRNGKFPANKFIIFNRLGKNPEDYPNGKTMPFVQVALK-KKARGENVRVGDV 1149
Query: 962 ISYIICEDGTSEAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
I +II RAY+ +E+ N NS L ID NYYLS QI P + R++ PIEGT+
Sbjct: 1150 IPFIIAGSDADGHPADRAYSPQEIMNTNSTLVIDYNYYLSHQILPPIERVIAPIEGTNRA 1209
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQ-FCDKFEFTCMNPSCKQVNT 1079
R+AECLGLD Y S + SE + E+ Q F + PSC +
Sbjct: 1210 RLAECLGLDARKYYSH-----ETSESSAFQRYESTLTDDQCFINVSPLLLKCPSCNATSF 1264
Query: 1080 VEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH-LINKLSQDMNKYIVKYYEGWLKCED 1138
+ + EC +C Y Y +I + S + +I YYEG L C+D
Sbjct: 1265 SLRSVKSLKETLYANTVEC---DCG---YEYSDFTIILQFSSQLRDFINLYYEGILVCDD 1318
Query: 1139 PGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS 1198
C + TR+ + K R C + +H Y + QLY Q+ F T T++
Sbjct: 1319 SSCGNRTRQMSVYGK-RCCNKSCRGSVHFEYNDEQLYNQIKFLLKAVQTTTGATRNGI-- 1375
Query: 1199 IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
I+ ++ + +++ R + +A VD+ +FS
Sbjct: 1376 IRCNA--------INKNISRIMNKNAREFVDMGLIFS 1404
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 249/549 (45%), Gaps = 50/549 (9%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDD 104
R + I + +FA + L+ G+ YE +E +Y+ VSE+EY + V +R EDD
Sbjct: 2 RKRNAGIKPSQRFAELRALRQ-AGKTRASTYESKENEELYDNVSEEEYRKIVRQRLDEDD 60
Query: 105 WIDDDGGDGYVEDGREIFD----DDIEDVPQKKEKHDKRKKNKNI-QNPNAK-GDIQKLL 158
++ DD G GYV++G + +D D +D +K KRKK+KN+ PN + G K
Sbjct: 61 FVVDDNGAGYVDNGYDEWDQSHYSDEDDENEKGSSGRKRKKSKNVLAEPNQQIGAFFKAN 120
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
A P + + D+ +A++L ++ I +L+TK AK
Sbjct: 121 AIQPASRIANRKNNEKEDEFMAEILGSIDQDIPE--RLSTKKG-----NRSHTTSNAKRR 173
Query: 219 LANFSKPIKVEKKIEK-PIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQM 277
+ I + P K P + + S+ A EE VD + M
Sbjct: 174 SQKAASSISTTNVVSSDPKKYIPETVPSTPQPASSLPIPSSPPAALETEENVDS---QPM 230
Query: 278 QIDDWDNSQQTQDVLP--EQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQ 335
++D+ + LP A + E+I + + V + S+S A P
Sbjct: 231 ELDEPE--------LPVGSDAPIIDVEESIAMKPLMSHDQVDDTASLSKATISQQPLSPM 282
Query: 336 VVEKKEHKCAEWEAIQTE------PSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDA 389
E + + I ++ P++S S+ + P E+ +F FF
Sbjct: 283 TPLSSELDVSAFSEINSKIKNVDVPASSYSSPISKVS----PSDVTEEDGSLF--FFWMD 336
Query: 390 FEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQ-- 447
+ ++Y G++ LFGKV+ K + SC + V I R +Y LPR E AQ
Sbjct: 337 YTEMY---GSLCLFGKVYDKATKQYVSCFLKVDGIMRSLYFLPRPSSSSVSEDSIAAQTK 393
Query: 448 -VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDT 506
VY E + ++ + ++KSR + KYAF L VP ++YLEV YS PALP+DL+G +
Sbjct: 394 DVYDEVANLLSKRGVKEWKSRVSKYKYAFELEDVPRTADYLEVIYSYSYPALPTDLTGSS 453
Query: 507 FSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQMEKIRITN 564
FSHVFGT ++ E +L R++ GP WL+ + F + SWC+ E+ C+ + I ++
Sbjct: 454 FSHVFGTNTALFEQFVLSRRVMGPCWLKI-QQPNFDAVKNASWCRVEIGCSSPQNISVSF 512
Query: 565 VCGNVLSRT 573
+ S+T
Sbjct: 513 EKNEITSKT 521
>gi|358365785|dbj|GAA82407.1| DNA polymerase alpha catalytic subunit [Aspergillus kawachii IFO
4308]
Length = 1465
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/704 (37%), Positives = 397/704 (56%), Gaps = 53/704 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K K E+ E +
Sbjct: 779 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSKLLKAEEKMQEGDDEDSA 838
Query: 622 KKAAYS---GGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
K GGLV EP+KG YDKFI++MDFNSLYPSIIQEYNICFTT+ D+D
Sbjct: 839 DKKKKDKYKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEYNICFTTVERTATADNDKEE 898
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 899 KVPEVPTSDQEQGILPKLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 958
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 959 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTIS 1018
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G++ K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1019 DALKVGDEFKKSVNERYRLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDKLEVKG 1077
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L + + L +H++++++ + VP+
Sbjct: 1078 LDMKRREYCSLSKEVSQKLLNEVLSGEDQ-----EVVLNRVHDYLRELAEKMREYSVPVQ 1132
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE---DGTSEAA 975
I +L+K PEEY +++++P VQVALR K ++ D ISY++ + +S A
Sbjct: 1133 KYVIYTKLSKRPEEYPNKESMPPVQVALR-ELARGKTVRPNDVISYVVTNGDAETSSLAP 1191
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y ++ +K +S LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1192 AKRSYTPQDVMKPDSGLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQ 1251
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTH--- 1089
Q +I + + V+++ +F TC CK+ + E + STH
Sbjct: 1252 INSSSGSNQQNADIFPLESQIPDSVRFENATRFTLTCR--FCKEKSVFEGLAQ-STHMCT 1308
Query: 1090 --GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
GVV C N C+ ++ L ++ +L + KYYEGWL C+D C + TR
Sbjct: 1309 ANGVV-----CPNQACQ-KTFSVL-TIVAQLESQIRAQTSKYYEGWLVCDDTACGNRTRQ 1361
Query: 1147 ------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS 1198
RC LG + C Y+ Y+E Q+Y QL +F + D+ KA ++
Sbjct: 1362 ISVYGHRC-LGPRGHAEGCLGRMTYE----YSEKQMYNQLLYFAGLWDVDKARKAAEKEP 1416
Query: 1199 I--KFDSETYMG------YCKMKQHVERFLESSAYNIVDLKKLF 1234
K DS T + + +K V+ +L+ V++ LF
Sbjct: 1417 TGEKKDSVTALAEFNRIRFGTIKGVVDAYLKKCGRQWVEMDSLF 1460
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 161/545 (29%), Positives = 252/545 (46%), Gaps = 78/545 (14%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE ++YEEV ++ Y + + R +DD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEVEEQGDIYEEVDDEGYKKIIRNRLDQDDFVVDDNGEGYA 65
Query: 116 EDGREIFDDDIED----------VPQKKEKHDKRKKNKNIQNPNAKGDIQKLLAN--MPV 163
+DGRE++++ D +P + + ++++ + + I K ++ P
Sbjct: 66 DDGREVWNERTADYGDSESEDDGLPARGKAAKRKREEEKQRQEKINNGISKYFSSGAAPS 125
Query: 164 KKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFS 223
K K +D +ADLL EV+T + P T IV K E A+ + S
Sbjct: 126 APKPKPVATAEDDAFMADLLGEVDTNVVPH---RVPTRNIV--KTE-----ARRKVRILS 175
Query: 224 KPIKVEKKIEKPIKKEP-----SPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQ 278
P+ + EKPIK++ SP+KD+ E+N + DDG M
Sbjct: 176 PPLADRTRREKPIKRDENSDPVSPVKDQ---------PEVNFDDD------DDGALPGMD 220
Query: 279 IDD------WDNSQQTQDVLPEQAKVELQIEAIESQS--IEEKVDVT--NVESVSSAVEL 328
DD +S ++ V + +++E ++ I E VT N +S
Sbjct: 221 DDDVPMSDPMPSSPISKAVERKSTTTPVKVEEVDDDDNDIMEIAQVTGQNDAKATSVNMA 280
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEP--STSEPQVHSRTADDSLPLATDH---------- 376
+ PPP+ + A + P S V S+ S P +++
Sbjct: 281 GSRPPPKFKRESTPPLASSSPTKPMPEVDASWNNVRSKLNVLSSPASSEMRSFGKLRAQD 340
Query: 377 --ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
E+ RMF+LD F ++ G++ LFGKV K+N S++S V + NI RK+Y LPR
Sbjct: 341 VVEDDGSLRMFWLD-FTEVN---GSLCLFGKVKNKQNGSYASAFVKIDNILRKLYFLPRE 396
Query: 435 EHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
K T E V + VY E D + ++ K+ K + +KYAF LPGVP +EYL++
Sbjct: 397 YRHKNGRDTDEEVDMEDVYHEVDGMMSRLKVGMHKMKPCTRKYAFELPGVPKETEYLKLF 456
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCK 549
Y LP D+ G+TFSHVFGT +S E +L + I GP WL+ EA+ + SWCK
Sbjct: 457 YPYDKSPLPMDVKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIEEADFTAVNNASWCK 516
Query: 550 YEVQC 554
+E Q
Sbjct: 517 FECQA 521
>gi|6018683|emb|CAB57881.1| DNA-directed DNA polymerase [Schizosaccharomyces pombe]
Length = 1405
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 271/697 (38%), Positives = 388/697 (55%), Gaps = 40/697 (5%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +++Q Q+ K +TN+ GN +RTL G R+ERNE++LLH F + Y++PDKQ
Sbjct: 742 IAAVAFKIQMLQLSK-NLTNIAGNSWARTLTGTRAERNEYILLHEFKKNGYIVPDKQQSI 800
Query: 605 NKKE---GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
+ G E G + G+KK Y GGLV EP+KG Y+ I++MDFNSLYPSIIQEYNI
Sbjct: 801 RRHAEAFGAEDGLQEESLGKKKDKYKGGLVFEPQKGLYETCILVMDFNSLYPSIIQEYNI 860
Query: 662 CFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
CFTT+ R +SD P + GI P I LVE RRQ+K L+K + +
Sbjct: 861 CFTTVD-RSPSNSDSDDQIPDTPSASANQGIFPRLIANLVERRRQIKGLLKDNSATPTQR 919
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVI 781
+Q+DI+Q+ALKLTANSMYGCLG+ SRF+A+PLA L+T KGRE L+NTK L + + +VI
Sbjct: 920 LQWDIQQQALKLTANSMYGCLGYTKSRFYARPLAVLITYKGREALMNTKELADQMGLQVI 979
Query: 782 YGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
YGDTDS+M++ NV D + +IGN+ K + N+ Y +LE+DID VY+ MLL KKKYAAL
Sbjct: 980 YGDTDSVMLNTNVTDKNHALRIGNEFKEKVNERYSKLEIDIDNVYQRMLLHAKKKYAALQ 1039
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ S GK + ++KG+D+ RR++ LA EA KF + QIL + + ++NIH
Sbjct: 1040 LD--SQGKP--NLDVKGLDMKRREFCTLAKEASKFCLDQILSGE-----LTETVIENIHS 1090
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
++ + NG P I +L K PE+Y + K +P VQVAL+ + ++ GD
Sbjct: 1091 YLMDFSEKMRNGKFPANKFIIFNRLGKNPEDYPNGKTMPFVQVALK-KKARGENVRVGDV 1149
Query: 962 ISYIICEDGTSEAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
I +II RAY+ +E+ N NS L ID NYYLS QI P + R++ PIEGT+
Sbjct: 1150 IPFIIAGSDADGHPADRAYSPQEIMNTNSTLVIDYNYYLSHQILPPIERVIAPIEGTNRA 1209
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQ-FCDKFEFTCMNPSCKQVNT 1079
R+AECLGLD Y S + SE + E+ Q F + PSC +
Sbjct: 1210 RLAECLGLDARKYYSH-----ETSESSAFQRYESTLTDDQCFINVSPLLLKCPSCNATSF 1264
Query: 1080 VEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH-LINKLSQDMNKYIVKYYEGWLKCED 1138
+ + EC +C Y Y +I + S + +I YYEG L C+D
Sbjct: 1265 SLRSVKSLKETLYANTVEC---DCG---YEYSDFTIILQFSSQLRDFINLYYEGILVCDD 1318
Query: 1139 PGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS 1198
C + TR+ + K R C + +H Y + QLY Q+ F T T++
Sbjct: 1319 SSCGNRTRQMSVYGK-RCCNKSCRGSVHFEYNDEQLYNQIKFLLKAVQTTTGATRNGI-- 1375
Query: 1199 IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
I+ ++ + +++ R + +A VD+ +FS
Sbjct: 1376 IRCNA--------INKNISRIMNKNAREFVDMGLIFS 1404
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 249/549 (45%), Gaps = 50/549 (9%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDD 104
R + I + +FA + L+ G+ YE +E +Y+ VSE+EY + V +R EDD
Sbjct: 2 RKRNAGIKPSQRFAELRALRQ-AGKTRASTYESKENEELYDNVSEEEYRKIVRQRLDEDD 60
Query: 105 WIDDDGGDGYVEDGREIFD----DDIEDVPQKKEKHDKRKKNKNI-QNPNAK-GDIQKLL 158
++ DD G GYV++G + +D D +D +K KRK++KN+ PN + G K
Sbjct: 61 FVVDDNGAGYVDNGYDEWDQSHYSDEDDENEKGSSGRKRKRSKNVLAEPNQQIGAFFKAN 120
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEY 218
A P + + D+ +A++L ++ I +L+TK AK
Sbjct: 121 AIQPASRIANRKNNEKEDEFMAEILGSIDQDIPE--RLSTKKG-----NRSHTTSNAKRR 173
Query: 219 LANFSKPIKVEKKIEK-PIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQM 277
+ I + P K P + + S+ A EE VD + M
Sbjct: 174 SQKAASSISTTNVVSSDPKKYIPETVPSTPQPASSLPIPSSPPAALETEENVDS---QPM 230
Query: 278 QIDDWDNSQQTQDVLP--EQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQ 335
++D+ + LP A + E+I + + V + S+S A P
Sbjct: 231 ELDEPE--------LPVGSDAPIIDVEESIAMKPLMSHDQVDDTASLSKATISQQPLSPM 282
Query: 336 VVEKKEHKCAEWEAIQTE------PSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDA 389
E + + I ++ P++S S+ + P E+ +F FF
Sbjct: 283 TPLSSELDVSAFSEINSKIKNVDVPASSYSSPISKVS----PSDVTEEDGSLF--FFWMD 336
Query: 390 FEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQ-- 447
+ ++Y G++ LFGKV+ K + SC + V I R +Y LPR E AQ
Sbjct: 337 YTEMY---GSLCLFGKVYDKATKQYVSCFLKVDGIMRSLYFLPRPSSSSVSEDSIAAQTK 393
Query: 448 -VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDT 506
VY E + ++ + ++KSR + KYAF L VP ++YLEV YS PALP+DL+G +
Sbjct: 394 DVYDEVANLLSKRGVKEWKSRVSKYKYAFELEDVPRTADYLEVIYSYSYPALPTDLTGSS 453
Query: 507 FSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQMEKIRITN 564
FSHVFGT ++ E +L R++ GP WL+ + F + SWC+ E+ C+ + I ++
Sbjct: 454 FSHVFGTNTALFEQFVLSRRVMGPCWLKI-QQPNFDAVKNASWCRVEIGCSSPQNISVSF 512
Query: 565 VCGNVLSRT 573
+ S+T
Sbjct: 513 EKNEITSKT 521
>gi|350634362|gb|EHA22724.1| DNA polymerase alpha, catalytic subunit [Aspergillus niger ATCC 1015]
Length = 1971
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/647 (39%), Positives = 376/647 (58%), Gaps = 35/647 (5%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K K E+ E + +
Sbjct: 778 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSKLLKAEEKMQEGDDDESA 837
Query: 622 KKAAYS---GGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
K GGLV EP+KG YDKFI++MDFNSLYPSIIQEYNICFTT+ D+D
Sbjct: 838 DKKKKDKYKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEYNICFTTVERTATADNDKEE 897
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 898 KVPEVPTSDQEQGILPKLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 957
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 958 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTIS 1017
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G++ K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1018 DALKVGDEFKKSVNERYRLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDKLEVKG 1076
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L + + L +H++++++ + VP+
Sbjct: 1077 LDMKRREYCSLSKEVSQKLLNEVLSGEDQ-----EVVLNRVHDYLRELAEKMREFSVPVQ 1131
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE---DGTSEAA 975
I +L+K PEEY +++++P VQVALR K ++ D ISY++ + +S A
Sbjct: 1132 KYVIYTKLSKRPEEYPNKESMPPVQVALR-ELARGKSVRPNDVISYVVTNGDAETSSLAP 1190
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y +++ +K +S LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1191 AKRSYTLQDVMKPDSGLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQ 1250
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV 1092
Q +I + + V+++ + TC CK+ + E + STH
Sbjct: 1251 INSSSGSNQQNADIFPLESQIPDSVRFENATRLTLTCR--FCKEKSVFEGLAQ-STHMCT 1307
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR------ 1146
C N C+ P++ L ++ +L + KYYEGWL C+D C + TR
Sbjct: 1308 ANGIICPNQACQ-KPFSVL-TIVAQLEAQIRAQTSKYYEGWLVCDDTACGNRTRQISVYG 1365
Query: 1147 -RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC LG + C Y+ Y+E Q+Y QL +F + D+ KA
Sbjct: 1366 HRC-LGPRGHAEGCLGRMTYE----YSEKQMYNQLLYFAGLWDVDKA 1407
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 258/547 (47%), Gaps = 83/547 (15%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE ++YEEV ++ Y + + R +DD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEVEEQGDIYEEVDDEGYKKIIRNRLDQDDFVVDDNGEGYA 65
Query: 116 EDGREIFDDDIED----------VPQKKEKHDKRKKNKNIQNPNAKGDIQKLL--ANMPV 163
+DGRE++++ D +P + + ++++ + + I K P
Sbjct: 66 DDGREVWNERTADYGDSESEDDELPARGKAAKRKREEEKQRQEKINNGISKYFNSGAAPS 125
Query: 164 KKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFS 223
K K +D +ADLL EV+T + P T IV K E A+ + S
Sbjct: 126 APKPKPVATAEDDAFMADLLGEVDTNVVPH---RVPTRNIV--KTE-----ARRKVRILS 175
Query: 224 KPIKVEKKIEKPIKKEP-----SPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQ 278
P+ + E+PIKK+ SP+KD+ E+N + DDG M
Sbjct: 176 PPLADRTRKERPIKKDENSDPVSPVKDQ---------PELNFDD-------DDGALPGMD 219
Query: 279 IDD------WDNSQQTQDVLPEQAKVELQIEAIES--QSIEEKVDVTNV-ESVSSAVELS 329
DD +S ++ V + +++E + I E VT ++ ++++ ++
Sbjct: 220 DDDVPMSDPMPSSPISKAVERKSTTTPVKVEEFDDDDNDIMEIAQVTGQNDAKATSINMA 279
Query: 330 TS-PPPQVVEKKEHKCAEWEAIQTEP----STSEPQVHSRTADDSLPLATDH-------- 376
S PPP++ KKE A + T+P S V S+ S P +++
Sbjct: 280 GSRPPPKL--KKESTPALASSSPTKPMPEVDASWNDVRSKLNVLSSPASSEMRSFGKLRA 337
Query: 377 ----ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
E RMF+LD F ++ G++ LFGKV K+N S++S V V NI RK+Y LP
Sbjct: 338 QDVVEEDGSLRMFWLD-FTEVN---GSLCLFGKVKNKQNGSYASAFVKVDNILRKLYFLP 393
Query: 433 RSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
R K T E V + VY E D + ++ ++ K + +KYAF LPGVP +EYL+
Sbjct: 394 REYRHKNGRETDEEVDMEDVYHEVDGMMSRLRVGMHKMKPCTRKYAFELPGVPKETEYLK 453
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISW 547
+ Y LP D+ G+TFSHVFGT +S E +L + I GP WL+ EA+ + SW
Sbjct: 454 LFYPYDKSPLPMDVKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIEEADFTAVNNASW 513
Query: 548 CKYEVQC 554
CK+E Q
Sbjct: 514 CKFECQA 520
>gi|396491082|ref|XP_003843485.1| similar to DNA polymerase alpha catalytic subunit [Leptosphaeria
maculans JN3]
gi|312220064|emb|CBY00006.1| similar to DNA polymerase alpha catalytic subunit [Leptosphaeria
maculans JN3]
Length = 1461
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 280/721 (38%), Positives = 407/721 (56%), Gaps = 51/721 (7%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH+ Y+ PDKQ+GK
Sbjct: 757 IAAISMKVQMLPLTKV-LTNLAGNSWARTLSGTRAERNEYILLHEFHKNKYICPDKQWGK 815
Query: 605 NKKEGEETG-EANKGKGRKKAAYSGG-LVLEPKKGFYDKFIILMDFNSLYPSIIQEYNIC 662
+K + EE E +G KK G LV EP+KG YDKFI++MDFNSLYPSIIQE+NIC
Sbjct: 816 SKVKIEEDAVEGEEGADAKKKDKFKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEFNIC 875
Query: 663 FTTIPVRMLQDSDITTLCEYLPEHQV--DTGILPSEIKKLVESRRQVKALMKQPNLSSDL 720
FTT+ + +D++ + +PE + GILP I LV RR+VK LMK + + D
Sbjct: 876 FTTV-----ERADLSEDDDKVPEVPATQEQGILPRLIATLVSRRREVKKLMKAKDATPDQ 930
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEV 780
L +DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL TK + E V
Sbjct: 931 LATWDIKQLALKLTANSMYGCLGYTKSRFYARPLAMLTTYKGREILRKTKDMAEEKALRV 990
Query: 781 IYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL 840
IYGDTDS+MI+ NV++ K+GN+ K E N Y+ LE+DID V++ +LL KKKYAA+
Sbjct: 991 IYGDTDSVMINTNVDNIQDALKLGNEFKKEVNDSYRLLEIDIDNVFRRILLHAKKKYAAI 1050
Query: 841 SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ + +GK + E+KG+D+ RR++ L+ E +++ +L + + ++ IH
Sbjct: 1051 NMIPV-DGKYVEKLEVKGLDMRRREYCALSKETSTELLNFLLSGEDP-----ETVVEKIH 1104
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
H++++ + +P I QL K P+EY + ++P VQVALRL K +K D
Sbjct: 1105 NHLRELSKRMREYAIPTRKYTIYTQLGKNPKEYPNGNSMPSVQVALRL-MAKGKHVKAKD 1163
Query: 961 TISYIICED--GTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+S+II + G++E A + AY ++E LK +S LK D++YYL +QI P V RL PI+GT
Sbjct: 1164 VMSFIITGESSGSAENAAKNAYPVDEVLKTDSGLKPDIDYYLHKQILPPVERLCAPIDGT 1223
Query: 1018 DAVRIAECLGLDTSLYR-SQIKESIQQSEE-NILGVGEAEEVKYQFCDKFEFTCMNPSCK 1075
+ +A CLGLDTS YR S + QQ E + L + +++Q C C SC
Sbjct: 1224 NITMLAACLGLDTSKYRVSTVSGGAQQDTEIHPLESQIPDSMRFQSCTPLWLRCR--SCT 1281
Query: 1076 QVN-----TVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
V + +PT S V +C CK T ++ +L + + + YY
Sbjct: 1282 TVFPFQGLSATSPTTTSLQTVSHNGIQCPAEGCKQILQTL--SVVAQLESSIRQLLASYY 1339
Query: 1131 EGWLKCEDPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHY 1183
G L C+DP C + TR RC LG K L C K+H E ++ QL +F
Sbjct: 1340 AGHLVCDDPQCGNRTRSISVYGHRC-LGPKG-LAKDCLG-KMHWEMREKDVWNQLLYFQS 1396
Query: 1184 ICDITKALTKSDTPSIKFDSETYMG---------YCKMKQHVERFLESSAYNIVDLKKLF 1234
+ D+ + + ++ +S M + +K VE +LE + V + LF
Sbjct: 1397 LFDVDRVAKGEEGVKVE-ESRVKMKILAEQNRERFGTLKGVVEAWLERNGRQWVQMDSLF 1455
Query: 1235 S 1235
S
Sbjct: 1456 S 1456
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 162/605 (26%), Positives = 261/605 (43%), Gaps = 104/605 (17%)
Query: 60 AFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVE 116
A ++K L+ G YE +E +Y+ V E Y + V R +DD+I DD G+GYV+
Sbjct: 6 ALAEIKALRAAGKTRLSTYEVEEEEQLYDTVDEDGYKKIVRSRLDQDDFIVDDNGEGYVD 65
Query: 117 DGREIFDD------------DIEDVPQKKEKHDKRKK--NKNIQNPNAKGDIQKLLANMP 162
DGRE +DD + ED K K KRK+ +K Q+ G + A
Sbjct: 66 DGREEWDDGQGRYHYAATDSEGEDERPAKGKAAKRKREEDKEKQDKINNGISKYFSAKTA 125
Query: 163 VKKKKKEEVQLNND-DVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLAN 221
K K + V D D + DLL E++T N I PAP +
Sbjct: 126 AKAPKPKPVATAADKDFMEDLLGEIDT------------NPI-----RQPAPRMR----- 163
Query: 222 FSKPIKVEKK-----IEKPIKK-EPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL-- 273
P+K E + + PI + P+ K +D++M + + E DDGL
Sbjct: 164 ---PVKTEARRKTRVLSPPISENRPAVSKKRTNDSDTIMP---DTPPAANEYGDDDGLPT 217
Query: 274 WEQMQIDDWDNSQQTQDV---LPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELST 330
+ + D Q+ V + +A+ ++IE E +E + ++V ++
Sbjct: 218 FADDDVPMSDPPLQSSPVAKAVQRRAQPAVKIEEEEEDLMEVTQPTGGLGVPVTSVNMAG 277
Query: 331 SPPPQVVEKKEHK--------------CAEWEAIQTE------PSTSEPQVHSRTADDSL 370
P ++K E+ + W + ++ P+ V +D+L
Sbjct: 278 KRPIARIKKAEYPTPASSSPVGPSAVDASSWNEVTSKLNVMSSPAPQTTGVGKMRPEDAL 337
Query: 371 PLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYL 430
E MF++D E G++ LFGKV ++ +++SC + + NI RK+Y
Sbjct: 338 ------EEDGSLHMFWIDYTE----INGSLCLFGKVKDRQTGNYASCFLKIDNILRKLYF 387
Query: 431 LPRS----EHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY 486
LPR + T E V ++ V E D I +++++ K + +KYAF LP +P ++Y
Sbjct: 388 LPREYRQVRGVTTDEEVRLSDVSDEVDSIMSRHRVGMHKIKPCTRKYAFELPDIPKEADY 447
Query: 487 LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEF--PEAEKFPSR 544
L++ Y L +DLSG+TFSHVFGT +S E +L + + GP WL+ P+
Sbjct: 448 LKLLYGYDKMPLSADLSGETFSHVFGTNTSLFEQFVLWKNVMGPCWLKIDNPDLGAI-HN 506
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNV---------LS-RTLMGGRSERNEFLLLHAFHEKS 594
SWCK E Q + I + + N+ LS RT + + E L+ A
Sbjct: 507 ASWCKLEAQVAKPNSISVLSNSDNLDAPPMTLMSLSLRTTFNAKDNKQEILMASAMIYDK 566
Query: 595 YVLPD 599
+ L D
Sbjct: 567 FSLTD 571
>gi|58268454|ref|XP_571383.1| DNA polymerase alpha catalytic subunit [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227618|gb|AAW44076.1| DNA polymerase alpha catalytic subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 1485
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 280/708 (39%), Positives = 395/708 (55%), Gaps = 79/708 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK----EGEETGE-- 614
++TN+ GN + TL GGR+ RNEF+LLH FH YV PDK K K + +E E
Sbjct: 825 QLTNLAGNSWNLTLNGGRAVRNEFILLHEFHRLEYVCPDKAPYKAKTRPTGDDDEVTEDI 884
Query: 615 -ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
A KG+ R KA Y+GGLV EPK+G +DK+II+MDFNSLYPSIIQEYNI FTT+ +D
Sbjct: 885 IAMKGQ-RGKAKYAGGLVFEPKRGLWDKYIIIMDFNSLYPSIIQEYNIDFTTVE----RD 939
Query: 674 SDITTLCEYLPE---HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
D E +P+ V G+LP I LV RRQVKALMK + + L+QYDI+Q+A
Sbjct: 940 DDENAEEEKIPDVPSSDVPQGVLPRIIATLVNRRRQVKALMKDKSATPAKLLQYDIKQQA 999
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANSMYGCLGF SRF ++PLAAL T KGREIL +T+ L E+L +V+YGDTDS+ +
Sbjct: 1000 LKLTANSMYGCLGFAGSRFSSRPLAALTTFKGREILTHTRELAESLQLDVVYGDTDSVFV 1059
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ NV Y KI N+ K N+ YK LE+D+D V++ +LLL KKKYAA+ I +
Sbjct: 1060 NSNVTTYPEALKIANEFKKLVNERYKLLEIDLDAVFERILLLNKKKYAAVKIDEAGER-- 1117
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
S E+KG+D+ RR++S+++ +A ++ +IL + + + ++ IHE + K+ +
Sbjct: 1118 --STEVKGLDMKRREFSKVSKDASAAILKEILSGE-----ATEVVVEKIHELLTKLGEAV 1170
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED- 969
N +P+ I K+L K PE+Y D+K+ PHVQVALR+ + ++ D I YIIC D
Sbjct: 1171 RNNEIPIDDYIIFKRLGKNPEDYPDKKSQPHVQVALRMKQKGA-AVRAHDVIPYIICLDE 1229
Query: 970 ---GTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQI-HPVVTRLLEPIEGTDAVRIAE 1024
G A+ RA++ ++L + S+L+ID YYL QQI HP++ RL E IEGT+ R+AE
Sbjct: 1230 HGKGGKTASADRAFHPDDLRRQGSELRIDHEYYLDQQILHPIL-RLCETIEGTERARLAE 1288
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
CLG + Q+ E ++ +++ D C PSC
Sbjct: 1289 CLGTAEA----------QEKEFFTFDSQISDNDRFRDADPLNLVC--PSC---------- 1326
Query: 1085 RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
+ VFV + E V + L +L + +I KYY GW+ C+ GC
Sbjct: 1327 ---SEETVFVGLQTDASEVLV---IHPASLQLQLENQIRSHISKYYLGWMTCDGEGCGLR 1380
Query: 1145 TR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTP 1197
TR RC LG C + + YT+ +LY QL ++ + D+ K L +
Sbjct: 1381 TRAMSVYGKRC-LGFIKENCWGTMRLE----YTDAKLYNQLLYYRSLFDVEKILN-AVRG 1434
Query: 1198 SIKFDSETYMGYCKMKQHVE------RFLESSAYNIVDLKKLFSCEEK 1239
S +FD + K E +L+ + VDLK LF E+
Sbjct: 1435 SQRFDEIRPLTTANQKVLSELVAVTDMYLDKNGRRYVDLKGLFGFMER 1482
>gi|313236818|emb|CBY12070.1| unnamed protein product [Oikopleura dioica]
gi|313241440|emb|CBY33695.1| unnamed protein product [Oikopleura dioica]
Length = 1387
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 282/706 (39%), Positives = 386/706 (54%), Gaps = 84/706 (11%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++ITN+CGN+LSRTL GR+ERN +LLLHAFH+K ++ P K ++G++ G
Sbjct: 730 VQITNICGNILSRTLSRGRAERNAYLLLHAFHKKDHLPPPPYKKKTVEDGDKKG------ 783
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
++GG+VLEPKKG Y +I+L+DFNSLYPSIIQEYNICFTT ++ DI+T
Sbjct: 784 ----PKFAGGMVLEPKKGLYTNYILLLDFNSLYPSIIQEYNICFTTTAMQAPPGEDISTW 839
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
LP+ ++ GILP EIKKLV R++VK L+K ++D L + +IRQ LKLTANSMY
Sbjct: 840 LPDLPK-TMEEGILPFEIKKLVNRRKEVKKLIKNEK-NADELARLNIRQLGLKLTANSMY 897
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLGF SRF AQPLAALVTAKGREIL TK VE +N EV+YGDTDS+MI+ N +
Sbjct: 898 GCLGFTASRFCAQPLAALVTAKGREILEATKVFVEKMNLEVVYGDTDSIMINSNSTNISE 957
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
V K+GN +K E NK Y+ LE+DIDG YK MLLLKKKKYAA+ NGK +E KG+
Sbjct: 958 VMKLGNLVKKEVNKHYRLLEIDIDGAYKSMLLLKKKKYAAID----QNGK----EEFKGL 1009
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDWS++A G+ ++ +L EQ ++ ++ IHEH++ I T L+N
Sbjct: 1010 DIVRRDWSEIARNEGRTILKLLLHEQDE-----EEGVRKIHEHLEMIGTKLENKEYRTVD 1064
Query: 920 LEITKQLTKAPEEYTDRK-ALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQR 978
I K LTKAPE+Y PHV+VALR+N K K GDT+ YIIC A R
Sbjct: 1065 YRIQKALTKAPEQYPKSGDGQPHVKVALRMNKKQPGKFKAGDTVPYIICCGDEKLKAADR 1124
Query: 979 AYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIK 1038
A++ E+ K +ID++YYL Q+ PV RLL+PIE TD +IA LG+D S ++S+
Sbjct: 1125 AFHPSEVAREKK-EIDIDYYLRSQLVPVFGRLLDPIEATDEQQIATRLGMDPSAFKSRAA 1183
Query: 1039 ESIQQSEENILG--VGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLD 1096
+ E + + EE K C E + +
Sbjct: 1184 TRARAEREEEMARIASQKEEEKLANCTPLEIN-------------------------IGE 1218
Query: 1097 ECINPECKVPPYTY-----------LPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
E + + VPP++ + + L + + I + Y+ W C C T
Sbjct: 1219 ERLTLDLFVPPFSQNYGDGKALREKMSQIECALRKALKLQIKRVYDNWQIC---SCGYRT 1275
Query: 1146 RRCPLGLKTR---LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK--SDTP--- 1197
R ++ C +C L ++ Y QL FF I D L K S+ P
Sbjct: 1276 RFISPNYTSKGLFACPSCEDDILKCEFSISDFYLQLQFFQRIFDADAWLKKMNSEIPKEK 1335
Query: 1198 --------SIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
I +E Y Y +K+ + ++ + V L L+S
Sbjct: 1336 EQREMALKEINRVNEDYAYYVGVKKIADEAMKRCNFGKVSLPSLWS 1381
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 243/533 (45%), Gaps = 70/533 (13%)
Query: 42 MEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQ 101
ME R R + DK ++ A KLK +G G+ H YE +NVYEEV E Y E +R
Sbjct: 1 MERSRRNRTQ-DKRSE--ALAKLK--RGGGI-HDYEVDEVQNVYEEVDEGTYQEMRDQRA 54
Query: 102 EDDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLL--- 158
D + D D +++DGR++FDDD E P +++ K++K K + + G+I ++
Sbjct: 55 SDFVVGADADD-WMDDGRDVFDDDDE--PFQEDAKTKKQKKKMAKFASGSGNIAAMILKQ 111
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEV---NTTIAPTLKLNTKTNEIVIPKEEPPAPTA 215
A K K +++++++DD L +++E+ N ++ T +L K + PA T
Sbjct: 112 AKNSKTKTKAKDIKMHDDDDLDAIMNEIDDGNVSMKVTPRLKKSKKSK---KPQAPAITF 168
Query: 216 KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWE 275
SK ++++++ P K+ K + +V + E A+Q DD L E
Sbjct: 169 NSSPEKSSKKRVLQQRVQNPTKRP--------KLDKNVFKREAE-AKQEYISDNDDELPE 219
Query: 276 QMQI---DDWDNS-QQTQDVLPEQAKVELQIEA-IESQSIEEKVDVTNVESVSSAVELST 330
+ +D+D + ++ +P++ +I + +++ S+EE+ V N +
Sbjct: 220 PGDVFGDNDFDEEMSEDENRIPKKEPSSTEISSKLQNISMEEEKSVIN--------HVKE 271
Query: 331 SPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAF 390
P Q+ C E++ + D P+ ++ +++LDA+
Sbjct: 272 EPDSQIDWNATKTCVEFD---------------KEEDIQYPV-----DENCLNLYWLDAY 311
Query: 391 EDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYS 450
E Y + G +YL G+ V SCC+I+ NI +Y+LPR E VY
Sbjct: 312 ETQYNKSGKLYLTGRANVA--GELKSCCLIISNIPHVVYILPR-------ENSDTGDVYE 362
Query: 451 EFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHV 510
E + + K+ +K++ ++KK F GVP +EYL V Y K P + S + G FSHV
Sbjct: 363 EIGEWMDKNKVDSWKAKPMKKKNFFGGAGVPPEAEYLRVEYGPKNPLMSSTMKGAHFSHV 422
Query: 511 FGTKSSFLENLLLERKIKGPSWLEFPEAEKFP-SRISWCKYEVQCNQMEKIRI 562
F E LER I GP WL ISWC E C +++
Sbjct: 423 FNVNQPLFEFFALERNIMGPCWLSISSYSPVSGGAISWCSVEYDCTDYRAVQV 475
>gi|308198132|ref|XP_001386860.2| DNA-directed DNA polymerase alpha Required for mitotic DNA synthesis,
premeiotic DNA synthesis, recombination, and full
sporulation [Scheffersomyces stipitis CBS 6054]
gi|149388875|gb|EAZ62837.2| DNA-directed DNA polymerase alpha Required for mitotic DNA synthesis,
premeiotic DNA synthesis, recombination, and full
sporulation [Scheffersomyces stipitis CBS 6054]
Length = 1463
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/734 (36%), Positives = 397/734 (54%), Gaps = 74/734 (10%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKK 607
+ +Q + K ++TN+ GN S TL G R+ RNEF+LLH F +Y++PDK+ + KN
Sbjct: 750 FSIQILSLSK-QLTNIAGNAWSHTLSGTRAGRNEFILLHEFKRNNYIVPDKEDKFHKNAN 808
Query: 608 EGEET------GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
+E +A KK Y GGLV EP+KG + +I++MDFNSLYPSIIQE+NI
Sbjct: 809 HQQEAKMEATEDDATTVTSNKKPKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEFNI 868
Query: 662 CFTTIP-----VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
CFTT+ V +D D+ +L PE G+LP + LV RR+VK L+K P
Sbjct: 869 CFTTVDRDNFNVTHDEDRDMPSL----PERDSAAGVLPRLLNSLVSRRREVKKLLKDPKN 924
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL 776
+ QYDIRQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E++
Sbjct: 925 TPFQRAQYDIRQQALKLTANSMYGCLGYINSRFYAKPLAMLVTNKGREILMDTRQLAESI 984
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI V+D+ KIG Q K + N+ Y+ LE+DID V+K +LL KKK
Sbjct: 985 GLRVVYGDTDSVMIDTGVDDFQEAIKIGEQFKLQVNERYRLLEIDIDNVFKRLLLHAKKK 1044
Query: 837 YAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YAA++ S S G++ + E+KG+D+ RR++ QL+ E FV+ +IL +D +
Sbjct: 1045 YAAMNASINSKTGEISTTLEVKGLDMRRREYCQLSKEISAFVLMKIL-----SDLDPEKA 1099
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
L +++++++++ + N + + +I +L+K P Y + K++P VQVAL+L ++ K
Sbjct: 1100 LGDVYDYLEEMSGKIKNNEIAVDKYKINTKLSKDPNNYPNGKSMPQVQVALKL-RSDGKV 1158
Query: 956 LKQGDTISYIIC---EDGTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+K G I+Y+I D + +RA I E L + LK D NYYL +QI V RLL
Sbjct: 1159 IKAGSVITYVITAPKSDDDKSSPPERARAIHELLGKKTDLKPDANYYLEKQIFAPVERLL 1218
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMN 1071
E IEG D VR+A+CL +DT + ++K S E L + +++ + F +N
Sbjct: 1219 ERIEGIDMVRVAKCLDIDTKKFILRVKNSENTGEITSLEASVTDSERFR---QASFLVLN 1275
Query: 1072 PSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYE 1131
C + + V F C + P + L +L + K+I YY
Sbjct: 1276 CKCGKQFRFGGIIASRDYSVTFNGVTCNSCSYNFP----VLKLTAQLEGAIRKHISVYYS 1331
Query: 1132 GWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFH 1182
GWL C+D C TR RC GL C +YK Y++ LY QL +F+
Sbjct: 1332 GWLVCDDNACGITTRQISVYGKRCIGSSGL-AHGCKGIMRYK----YSDKALYNQLLYFN 1386
Query: 1183 YICDITKA----------------------LTKSDTPSIKFDSETYMGYCKMKQHVERFL 1220
I D+ KA L ++ + GYC + V+++L
Sbjct: 1387 AIFDVDKAKKDELRPIYDAFTQSAQAAPTKLASGQVAALAEQNRELFGYC--QDVVQKYL 1444
Query: 1221 ESSAYNIVDLKKLF 1234
+ V++ +F
Sbjct: 1445 QDCGRRYVNMGSIF 1458
Score = 136 bits (342), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 233/518 (44%), Gaps = 81/518 (15%)
Query: 81 DENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVEDGREIFDDDIED--VPQKKEKHD 137
D +Y+EV E+ Y E K+ DD+I DD G+GYV++G + +DD ++E
Sbjct: 36 DVGIYDEVDEETYREHKRKQLMNDDFIVDDNGEGYVDNGVDEWDDSTRPNYYSDEEEAQA 95
Query: 138 KRKKNKNIQNPNAKGDIQKLL-------ANMPVKKKKKEEVQLNNDDVLADLLSEVNTT- 189
K+ K Q P + ++ PV+ KK V N DD+L D V T
Sbjct: 96 GTKRKKKSQRPVKVTKVAQISNYFKPAGGAAPVQSKK---VDANIDDILDDFADSVPTKK 152
Query: 190 -----IAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLK 244
+ K N+ N+++ K+ NFS +K EK + K ++
Sbjct: 153 KAKREVTNIFKNNSSNNKVM---------KTKKKTFNFSTSVKSEKSV----KHVSIDVE 199
Query: 245 DEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEA 304
D+ S D M+++ E+ P+ ++ D +++ +++ P + +
Sbjct: 200 DDNDSQDFSMDMD---TEEQPSSPIK-------KVKDEVIAEEKENIDPSTKALNVA--- 246
Query: 305 IESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQ------TEPS--T 356
E++S+EE D S E+ S P+ V ++ A + +++ + P+ T
Sbjct: 247 -ENESVEESDD--------SEDEIVVSRRPRAVAANKNNRATFSSVKAVDIPSSSPTRAT 297
Query: 357 SEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSS 416
S Q++ D + +++K F+MF+LD E ++ LFGK+ +E N S
Sbjct: 298 SYSQINYTEKLDEALIVGSNDDKDSFKMFWLDYCE----VDSSLLLFGKILTREGNLVSG 353
Query: 417 CCVIVQNIDRKIYLLPRSEHL-----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEK 471
V + + R++Y LPR L ++PV+ V E + LD K EK
Sbjct: 354 V-VKINGLCRELYFLPRKFRLVDDEEDVQQPVTALDVNDEVTPLLLHQFGLDGLRAKPEK 412
Query: 472 -KYAFNLPGVPDLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLER 525
KYAF L G+P +EYL++ K +PS+L G+TFSHVFGT +S E +L+R
Sbjct: 413 MKYAFELAGIPKETEYLKILLPFKTNKNKNIVMPSELEGETFSHVFGTNASIFEAFVLQR 472
Query: 526 KIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQMEKIR 561
I GP W+E + F S S C+ EV + I+
Sbjct: 473 NIMGPCWIEVSNGD-FNSIQNTSHCQVEVSIDSPSYIK 509
>gi|303315657|ref|XP_003067833.1| DNA polymerase alpha catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107509|gb|EER25688.1| DNA polymerase alpha catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1463
Score = 431 bits (1109), Expect = e-117, Method: Compositional matrix adjust.
Identities = 271/708 (38%), Positives = 412/708 (58%), Gaps = 62/708 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE-TGEANKGKG 620
+TN+ GN +RTLMG R+ERNE++LLH F+ Y+ PDK +GK++ + EE GE + G
Sbjct: 780 LTNLAGNSWARTLMGTRAERNEYILLHEFYRNKYICPDKYFGKSQPKMEEYEGEDDGGDK 839
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK++++MDFNSLYPSIIQEYNICFTT+ ++ +++
Sbjct: 840 KKKDKYKGGLVFEPEKGLYDKYVLVMDFNSLYPSIIQEYNICFTTVNRELVSENENEEKV 899
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P Q + GILP I LV RR+VK LMK + + L +D +Q ALKLTANSMYG
Sbjct: 900 PEVPADQ-EQGILPRLISTLVSRRREVKKLMKNKRATPEELALWDTKQLALKLTANSMYG 958
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ NV++ +
Sbjct: 959 CLGYTQSRFYARPLAMLTTFKGREILQNTKELAEKNQLRVIYGDTDSVMINTNVDNMEEA 1018
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN+ K N YK LE+D+D V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1019 LKVGNEFKRLVNDSYKLLEIDVDNVFRRLLLHAKKKYAAINMTEV-DGKYVDHLEVKGLD 1077
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLDNGFVPL 917
+ RR++ L+ E ++++IL S DD L ++++++++ + +P+
Sbjct: 1078 MKRREYCTLSKEVSSKLLTEIL--------SGDDTEVVLGKVYDYLRELTQKMKEFTIPV 1129
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT- 976
I +L+K P+EY +++++P VQVALR K ++ D ISYI+ G SE ++
Sbjct: 1130 QKYVIFTKLSKRPDEYPNKESMPPVQVALR-ELARGKTVRPNDVISYIVTS-GDSETSSL 1187
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+R+Y ++ +K +S LK D+ YYL +QI P + RL PI GTDAV++AECLGLD
Sbjct: 1188 QPAKRSYTPQDVMKPDSGLKPDIEYYLLKQIFPPIERLCAPIPGTDAVQLAECLGLDVRK 1247
Query: 1033 YRSQIKESIQQSEENI----LGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTR 1085
Y QI S ++++ L + ++++ +F C +C + E T
Sbjct: 1248 Y--QINTSSSHGQQSLELCPLESQIPDSLRFEKAARFTLRCR--ACHERTVFEGLNISTD 1303
Query: 1086 LST-HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
+ T G+V C N C+ P++ + ++ +L + +YYEGW+ C+D C +
Sbjct: 1304 ICTPKGLV-----CPNSNCR-KPFSVI-SIVAQLESQIRAQTTRYYEGWIVCDDSACGNR 1356
Query: 1145 TR-------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSD 1195
TR RC LG + R C Y+ YTE QLY QL +F + D+ KA ++
Sbjct: 1357 TRQMSVYGHRC-LGPRGRAEGCLGRMSYE----YTEKQLYNQLLYFATLWDVDKAKATAE 1411
Query: 1196 TPSIKFDSETYMG--------YCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ E + + MK V+ +L+ V++ LF
Sbjct: 1412 KEASGEKKEKVLALVEWNRTRFGTMKGVVDEYLKKCGRQWVEMDVLFG 1459
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 179/701 (25%), Positives = 302/701 (43%), Gaps = 115/701 (16%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE + ++YEEV E+ Y V +R DD++ DD G+GY
Sbjct: 6 AKLAELRALRASGKKRLATYEVEEEGDIYEEVDEEGYKNVVRQRLDRDDFVVDDNGEGYA 65
Query: 116 EDGREIFDDDIE-------DVPQKKEKHDKRKKNKNIQN-PNAKGDIQKLLANM---PVK 164
+DGRE +DD D P + K KRK+ ++ Q I K +
Sbjct: 66 DDGREEWDDRRRVDSGTDSDEPPLRGKAAKRKREEDKQRREKINNGINKYFSGAYGTSNA 125
Query: 165 KKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K K ++ +ADLL EV+ + P+ + ++P + + S
Sbjct: 126 SKPKRNATAEDEAFMADLLGEVDVNVVPSR----------VSVKKPVKSETRRKVRIISP 175
Query: 225 PIKVEKKIEK-PIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWD 283
P+ E+ +K KKEP+P K +++ ++ +++ + PV D E + + D
Sbjct: 176 PLSQERTPKKVQAKKEPTPHKADVE-----LKSDIDFDDDVGLLPVGDD--EDVPMSDPP 228
Query: 284 NSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESV------SSAVELSTSPPPQVV 337
S + + ++ E + I+++ D+ +E+ ++ V ++ P +
Sbjct: 229 PSSPVAKAVERKNASLVKKEDEGADDIDDE-DLVTIEATGHHENNATRVNMTGKRPAPKL 287
Query: 338 EKKEHKCAEWEAIQTEPSTSEPQVHSRTADD--------------SLPLATDHENKKV-- 381
+ KE + P+TS P + A D S P + H K+
Sbjct: 288 KVKE-------SFYPSPATSPPVRANSDAIDASSWTDITRKLNVLSSPASDMHAFGKLRA 340
Query: 382 ---------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
R F+LD E G++ LFGKV K ++ S V + NI RK+Y LP
Sbjct: 341 QDAVETDGSLRFFWLDYTE----VNGSLCLFGKVKDKRSSRFVSAFVKIDNILRKLYFLP 396
Query: 433 RSEHL----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
R L T + + + V +E D++ T+ ++ K + +KYAF LP +P ++YL+
Sbjct: 397 REYRLHHGQNTDDEIDMEDVSNEVDELMTKLRVNVHKIKPCTRKYAFELPNIPKKAKYLK 456
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISW 547
+ Y P LP D+ G+TFSHVFGT ++ E +L + I GP WL+ +A+ S SW
Sbjct: 457 LMYPYDKPVLPIDVKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTAVSGASW 516
Query: 548 CKYEVQCNQMEKIRITNVCGNVLS----------RTLMGGRSERNEFLLLHA-FHEKSYV 596
CK E Q +Q I + N+ + RT + + + E L + A +E +
Sbjct: 517 CKLECQVSQPALISSISDAENLDTPTLTLMSLALRTQLNVKENKQEILAMSARVYENVSL 576
Query: 597 --------LPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGF-YDKFIILMD 647
LP K + + G + + RK + G +LE + F KF+ L
Sbjct: 577 TDPTPPAKLPCKTFTVMRPLGPTYPIGFEAETRK---HRGTFMLEKSEQFLLSKFLAL-- 631
Query: 648 FNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQV 688
F + P ++ + LQ+ D+T L L E +
Sbjct: 632 FEKMDPDVVMGHQ----------LQEVDLTVLINRLKEKRT 662
>gi|320034062|gb|EFW16008.1| DNA polymerase alpha catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1449
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 271/708 (38%), Positives = 412/708 (58%), Gaps = 62/708 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE-TGEANKGKG 620
+TN+ GN +RTLMG R+ERNE++LLH F+ Y+ PDK +GK++ + EE GE + G
Sbjct: 766 LTNLAGNSWARTLMGTRAERNEYILLHEFYRNKYICPDKYFGKSQPKMEEYEGEDDGGDK 825
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK++++MDFNSLYPSIIQEYNICFTT+ ++ +++
Sbjct: 826 KKKDKYKGGLVFEPEKGLYDKYVLVMDFNSLYPSIIQEYNICFTTVNRELVSENENEEKV 885
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P Q + GILP I LV RR+VK LMK + + L +D +Q ALKLTANSMYG
Sbjct: 886 PEVPADQ-EQGILPRLISTLVSRRREVKKLMKNKRATPEELALWDTKQLALKLTANSMYG 944
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ NV++ +
Sbjct: 945 CLGYTQSRFYARPLAMLTTFKGREILQNTKELAEKNQLRVIYGDTDSVMINTNVDNMEEA 1004
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN+ K N YK LE+D+D V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1005 LKVGNEFKRLVNDSYKLLEIDVDNVFRRLLLHAKKKYAAINMTEV-DGKYVDHLEVKGLD 1063
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLDNGFVPL 917
+ RR++ L+ E ++++IL S DD L ++++++++ + +P+
Sbjct: 1064 MKRREYCTLSKEVSSKLLTEIL--------SGDDTEVVLGKVYDYLRELTQKMKEFTIPV 1115
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT- 976
I +L+K P+EY +++++P VQVALR K ++ D ISYI+ G SE ++
Sbjct: 1116 QKYVIFTKLSKRPDEYPNKESMPPVQVALR-ELARGKTVRPNDVISYIVTS-GDSETSSL 1173
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+R+Y ++ +K +S LK D+ YYL +QI P + RL PI GTDAV++AECLGLD
Sbjct: 1174 QPAKRSYTPQDVMKPDSGLKPDIEYYLLKQIFPPIERLCAPIPGTDAVQLAECLGLDVRK 1233
Query: 1033 YRSQIKESIQQSEENI----LGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTR 1085
Y QI S ++++ L + ++++ +F C +C + E T
Sbjct: 1234 Y--QINTSSSHGQQSLELCPLESQIPDSLRFEKAARFTLRCR--ACHERTVFEGLNISTD 1289
Query: 1086 LST-HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
+ T G+V C N C+ P++ + ++ +L + +YYEGW+ C+D C +
Sbjct: 1290 ICTPKGLV-----CPNSNCR-KPFSVI-SIVAQLESQIRAQTTRYYEGWIVCDDSACGNR 1342
Query: 1145 TR-------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSD 1195
TR RC LG + R C Y+ YTE QLY QL +F + D+ KA ++
Sbjct: 1343 TRQMSVYGHRC-LGPRGRAEGCLGRMSYE----YTEKQLYNQLLYFATLWDVDKAKATAE 1397
Query: 1196 TPSIKFDSETYMG--------YCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ E + + MK V+ +L+ V++ LF
Sbjct: 1398 KEASGEKKEKVLALVEWNRTRFGTMKGVVDEYLKKCGRQWVEMDVLFG 1445
Score = 140 bits (352), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 164/654 (25%), Positives = 279/654 (42%), Gaps = 112/654 (17%)
Query: 103 DDWIDDDGGDGYVEDGREIFDDDIE-------DVPQKKEKHDKRKKNKNIQN-PNAKGDI 154
DD++ DD G+GY +DGRE +DD D P + K KRK+ ++ Q I
Sbjct: 39 DDFVVDDNGEGYADDGREEWDDRRRVDSGTDSDEPPLRGKAAKRKREEDKQRREKINNGI 98
Query: 155 QKLLAN---MPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPP 211
K + K K ++ +ADLL EV+ + P+ + ++P
Sbjct: 99 NKYFSGAYGTSNASKPKRNATAEDEAFMADLLGEVDVNVVPSR----------VSVKKPV 148
Query: 212 APTAKEYLANFSKPIKVEKKIEK-PIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVD 270
+ + S P+ E+ +K KKEP+P K +++ ++ +++ + PV
Sbjct: 149 KSETRRKVRIISPPLSQERTPKKVQAKKEPTPHKADVE-----LKSDIDFDDDVGLLPVG 203
Query: 271 DGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESV------SS 324
D E + + D S + + ++ E + I+++ D+ +E+ ++
Sbjct: 204 DD--EDVPMSDPPPSSPVAKAVERKNASLVKKEDEGADDIDDE-DLVTIEATGHHENNAT 260
Query: 325 AVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADD--------------SL 370
V ++ P ++ KE + P+TS P + A D S
Sbjct: 261 RVNMTGKRPAPKLKVKE-------SFYPSPATSPPVRANSDAIDASSWTDITRKLNVLSS 313
Query: 371 PLATDHENKKV-----------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCV 419
P + H K+ R F+LD E G++ LFGKV K ++ S V
Sbjct: 314 PASDMHAFGKLRAQDAVETDGSLRFFWLDYTE----VNGSLCLFGKVKDKRSSRFVSAFV 369
Query: 420 IVQNIDRKIYLLPRSEHL----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAF 475
+ NI RK+Y LPR L T + + + V +E D++ T+ ++ K + +KYAF
Sbjct: 370 KIDNILRKLYFLPREYRLHHGQNTDDEIDMEDVSNEVDELMTKLRVNVHKIKPCTRKYAF 429
Query: 476 NLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEF 535
LP +P ++YL++ Y P LP D+ G+TFSHVFGT ++ E +L + I GP WL+
Sbjct: 430 ELPNIPKKAKYLKLMYPYDKPVLPIDVKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKI 489
Query: 536 PEAE-KFPSRISWCKYEVQCNQMEKIRITNVCGNVLS----------RTLMGGRSERNEF 584
+A+ S SWCK E Q +Q I + N+ + RT + + + E
Sbjct: 490 EDADFTAVSGASWCKLECQVSQPALISSISDAENLDTPTLTLMSLALRTQLNVKENKQEI 549
Query: 585 LLLHA-FHEKSYV--------LPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPK 635
L + A +E + LP K + + G + + RK + G +LE
Sbjct: 550 LAMSARVYENVSLTDPTPPAKLPCKTFTVMRPLGPTYPIGFEAETRK---HRGTFMLEKS 606
Query: 636 KGF-YDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQV 688
+ F KF+ L F + P ++ + LQ+ D+T L L E +
Sbjct: 607 EQFLLSKFLAL--FEKMDPDVVMGHQ----------LQEVDLTVLINRLKEKRT 648
>gi|336271345|ref|XP_003350431.1| hypothetical protein SMAC_02144 [Sordaria macrospora k-hell]
gi|380090953|emb|CCC11486.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1482
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 273/715 (38%), Positives = 397/715 (55%), Gaps = 64/715 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQY--GKNKKEGEETGEANKGK 619
+TN+ GN +RTL G R+ERNE++LLH FH YV+PDKQ G+ + E E E
Sbjct: 784 LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYVVPDKQTFKGRQRIEEENAEEEGGEG 843
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ L + D
Sbjct: 844 AKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVDRTSLSEDD--DA 901
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P+ Q GILP I LV R+QVK+LMK N + + L +DI+Q ALKLTANSMY
Sbjct: 902 VPEVPKEQAQ-GILPKLIATLVSRRKQVKSLMKDKNATPEELATWDIKQLALKLTANSMY 960
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VIYGDTDS+MI+ N ++
Sbjct: 961 GCLGYTKSRFYARPLAVLTTYKGREILRSTKELAESNSLQVIYGDTDSVMINANKDNVAD 1020
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
++G++ K N+ Y+ LE+DID V++ +LL KKKYAA+++ ++ N K + E+KG+
Sbjct: 1021 ALRVGHEFKKAVNERYRLLEIDIDNVFRRILLQAKKKYAAINMVQV-NDKWVEKMEVKGL 1079
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVP 916
D+ RR++ L+ E ++++IL S DD +Q IHE+++ I + G VP
Sbjct: 1080 DMKRREYCGLSKEISNRILTEIL--------SGDDTEVSVQRIHEYLRDISAKMREGAVP 1131
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG--TSEA 974
+ I QL KAP++Y + ++P VQVALR K +++GD I+YI+ D TSEA
Sbjct: 1132 VQKYIILTQLGKAPKDYPNADSMPQVQVALR-ELAKGKTIRKGDVIAYIVTGDSKTTSEA 1190
Query: 975 ATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+RAY ++ LK S L DV +Y+ +QI P V RL I GT ++ E LGLD Y
Sbjct: 1191 VAKRAYTPQDVLKAESGLSPDVEWYIGKQIFPPVERLCANIVGTSTSQLTENLGLDVRRY 1250
Query: 1034 RSQIKESIQQSEENI----LGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA-PTRLST 1088
S + +++ L + +++Q C + C CK + E + S
Sbjct: 1251 SSNTNNNNSSGPQDLEIHPLESQIPDSLRFQSCARLSLRCRR--CKTSSPFEGLASPSSV 1308
Query: 1089 HGVVFVLDECINPECKVPPYTYLP--HLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
+ V +C P C+ LP ++ ++ + +YYEGWL C+D C + TR
Sbjct: 1309 NNVTPSGIQC--PSCQY----VLPTISVVAQVEAAVRAQTARYYEGWLVCDDSSCGNRTR 1362
Query: 1147 -------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS----- 1194
RC LG K C ++ Y+E +Y QL +F + D+ KA K+
Sbjct: 1363 QISVYGTRC-LGSKGLARGECGG-RMRYEYSERDIYNQLVYFASLWDVDKAKRKAKGNND 1420
Query: 1195 ---DTPSIKFDSE-----------TYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
D + K +E + + +K VE +L+ V + LF+
Sbjct: 1421 EDGDADAAKLSAEEKERVAIMAERNRVRFGTVKGVVENYLDKCGRRWVAMGTLFA 1475
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 244/545 (44%), Gaps = 66/545 (12%)
Query: 50 QKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDD 108
+++ K KFA F ++L+ G K Y+ + +YEEV E +Y + V R EDD++ D
Sbjct: 3 RRVAKRGKFAEF---RELRQSGKKKSYDVGEVDELYEEVDENQYKKIVRDRLNEDDFVVD 59
Query: 109 DGGDGYVEDGREIFD------DDIED---VPQKKEKHDKRKKNKNIQNPNAKG-DIQKLL 158
D G+GY +DGRE +D DD E+ +P K + K++K + +A DI +
Sbjct: 60 DNGEGYADDGREEWDRLPQYQDDSEEELGLPGSKPRKSKKQKEQEDAKRDANDRDITEYF 119
Query: 159 ANMPVKKKKKEEV--QLNNDDVLADLLSEVNTTIAPTLKLNTKTNE---------IVIPK 207
K ++V +D L DL+ +V + TK E ++ P
Sbjct: 120 TKGAAKAPPNQKVIKTEEDDKFLEDLIEKVTANTPTPVTRVTKKRERSVERRKVRVLSPV 179
Query: 208 EEPPAPTAKEYLA---NFSKPI-----KVEKKIEKPIKKEPSPLKDEIKSNDSVMEVE-- 257
EP P AK S P + + EP+P+ D + S D++M
Sbjct: 180 REPRPPMAKRAKTVDDRASSPAGDDDLLPDDDYLAAMDDEPAPVSDYLMS-DAIMPSSPA 238
Query: 258 MNVAEQ---SKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
VA + + EP + + +D D + +V A + S+ +++ +
Sbjct: 239 AKVATRRTFGRSEP-------KKKEEDEDEDEDMMEVAHTGAVTAASVNISASRQVKKIL 291
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAI-QTEPSTSEPQVHSRTADDSLPLA 373
+ + SS + +P P+V A W I Q S Q R+ +
Sbjct: 292 KADPIPASSSP---ARAPAPEV------DAASWNEINQKLNVVSMSQSEGRSVG-KIDYK 341
Query: 374 TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
E MF+ D E G++ LFGKV K+ ++ SC V V NI RK++ LPR
Sbjct: 342 DAIEEDGSLNMFWTDYTE----VNGSLCLFGKVLNKKTKTYVSCFVKVDNILRKLFFLPR 397
Query: 434 SEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ T E V + VY+E D+I T+ + K + +KYAF LP VP +YL++
Sbjct: 398 KHRVRGGQETTEGVEMMDVYNEVDEIMTKMNVGMHKIKACTRKYAFELPDVPKEGQYLKL 457
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWC 548
Y PA+ G+TFSHVFGT ++ E +L + I GP WL+ +A+ R S C
Sbjct: 458 LYPYTKPAMEPTTQGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTSLRNASHC 517
Query: 549 KYEVQ 553
K EV+
Sbjct: 518 KLEVR 522
>gi|367051082|ref|XP_003655920.1| hypothetical protein THITE_2120214 [Thielavia terrestris NRRL 8126]
gi|347003184|gb|AEO69584.1| hypothetical protein THITE_2120214 [Thielavia terrestris NRRL 8126]
Length = 1484
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/654 (40%), Positives = 384/654 (58%), Gaps = 56/654 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE-ETGEANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ K Y+ PDKQ K + E E E + G+G
Sbjct: 782 LTNLAGNSWARTLTGTRAERNEYILLHEFYGKKYICPDKQPFKGRARVEDENQEEDGGEG 841
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YD+F+++MDFNSLYPSIIQE+NICFTT+ D +
Sbjct: 842 KKKDKYKGGLVFEPEKGLYDRFVLVMDFNSLYPSIIQEFNICFTTVDRTFSSDDE----- 896
Query: 681 EYLPEHQVD--TGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+ +P D +LP I LV+ RRQVK+LMK N + + L +DIRQ ALKLTANSM
Sbjct: 897 DAVPPVPTDKTPAVLPKLIAGLVDRRRQVKSLMKDKNATPEQLATWDIRQLALKLTANSM 956
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+++ +VIYGDTDS+MI NV++
Sbjct: 957 YGCLGYTKSRFYARPLAMLTTFKGREILRSTKDLAESMSLQVIYGDTDSVMIHANVDNVA 1016
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K+E NK Y++LE+DID V++ +LL KKKYAA+++ + +NGK + E+KG
Sbjct: 1017 DALKVGREFKAEVNKRYRRLEIDIDNVFRRILLQAKKKYAAVNLVE-TNGKFVEKLEVKG 1075
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E K ++ +IL T+ S +Q+IHE++++I + +P
Sbjct: 1076 LDMKRREYCPLSREVSKRILDEILSGND-TEVS----VQHIHEYLREISGKMRAQAIPAQ 1130
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG--TSEAAT 976
I QL KAP+EY + ++P VQVALR K +++GD +SYII D TSE A
Sbjct: 1131 KYIILTQLGKAPKEYPNGDSMPQVQVALR-EMARGKTMRKGDVVSYIITGDSKTTSEPAA 1189
Query: 977 QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRS 1035
+RAY ++ LK +S L DV +Y+ +QI P V RL I GT ++A+ LGLD Y +
Sbjct: 1190 KRAYTPQDVLKADSGLTPDVEWYIGKQIFPPVERLCANIVGTSTAQLADNLGLDVRRYAN 1249
Query: 1036 QIKESIQQSEENILGVGEAEE-----VKYQFCDKFEFTCMNPSCKQVNTVE----APTRL 1086
+ S L + E +++Q C + C +CK E + R+
Sbjct: 1250 NSASNSSSSSNRDLDIHPLESQIPDAIRFQNCARLTLRCR--ACKASAPFEGLLGSADRI 1307
Query: 1087 STHGVVFVLDECINPECKVPPYTYLPHL--INKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
+ GV C P C + LP L + ++ + +YYEGWL C+D C +
Sbjct: 1308 TPAGVA-----C--PTC----HAVLPTLSIVAQVEAALRAQTARYYEGWLVCDDASCGNR 1356
Query: 1145 TR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
TR RC P GL R C +Y++ E +Y QL +F + D+ K
Sbjct: 1357 TRQMGVYGARCLGPKGL-ARDCLGRMRYEVG----ERDIYNQLVYFASLWDVDK 1405
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 100/177 (56%), Gaps = 11/177 (6%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK--- 438
+MF+ D E G++ LFGKV K+ + SC V + NI RK+Y LPR ++
Sbjct: 349 LKMFWTDYTE----VNGSLCLFGKVLNKKTGHYVSCFVKIDNILRKLYFLPRKHRVRRGV 404
Query: 439 -TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA 497
T E V + VY+E D I T+ + K + +KYAF LP +P ++YL++ Y PA
Sbjct: 405 ETTEQVEMMDVYNEVDAIMTKMNVDMHKIKVCTRKYAFELPEIPSEAQYLKLLYPYTRPA 464
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEV 552
+ G+TFSHVFGT ++ E +L +KIKGP WL+ +A+ F + S C+ EV
Sbjct: 465 IELGTKGETFSHVFGTNTALFEQFVLWKKIKGPCWLKIEDAD-FGALKNASHCRLEV 520
>gi|440796401|gb|ELR17510.1| DNA polymerase (pol2), putative [Acanthamoeba castellanii str. Neff]
Length = 1352
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 275/736 (37%), Positives = 406/736 (55%), Gaps = 119/736 (16%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKS---YVLPDKQYGKNKKEGEETGEANKG 618
+TNVCGN+ SR+LMG R+ER E+LLLH FH++ ++ PD+ +E G+ NKG
Sbjct: 665 LTNVCGNLWSRSLMGARAERIEYLLLHRFHDQPKPHFICPDR-------ASQEDGKFNKG 717
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
K +K AY GGLVL+PKKGFYD +I+L+DFNSLYPSIIQEYNICFTTI D ++
Sbjct: 718 K--RKPAYEGGLVLDPKKGFYDTYILLLDFNSLYPSIIQEYNICFTTI------DREV-- 767
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+ +LV R VK +K S+ Q +++Q ALKL ANSM
Sbjct: 768 ------------------VYELVNRRGAVKKQLKAERDGSERFQQLNVKQLALKLVANSM 809
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNV--- 794
YGCLGF +SRFFA LA L+T KGRE L TK E LN +VIYGDTDS+M++ +
Sbjct: 810 YGCLGFSHSRFFAMALAELITLKGREALKTTKEQAEGQLNLDVIYGDTDSIMVNTRIPSV 869
Query: 795 ---------NDYDSVF----KIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
D SV K+GN +K N+ Y +E+DIDG++K +LLL KKKYAAL+
Sbjct: 870 PAPDADPALRDSASVLSQVRKMGNDLKKVINQRYSHVEIDIDGIFKMILLLAKKKYAALT 929
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
I N +E+KG+D+VRRDW L+ E G+ V+ +I+ + D + IH
Sbjct: 930 IGNDIND---VKKEMKGLDLVRRDWCDLSKEMGQRVLDEIMSGKPRQDV-----VSGIHS 981
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
++ + + + +G + L ITK L+K P+ Y D+K LPHVQVAL+L N +K+ G+
Sbjct: 982 YLTHMGSQIKSGRISLEKFVITKCLSKDPDAYPDKKGLPHVQVALKLRQQN-RKVSVGEY 1040
Query: 962 ISYIICEDGTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
I Y+IC+ G + +A +RA++ +++ K++ L+ID+++YL+QQIHP ++RL PIEGTD
Sbjct: 1041 IRYVICK-GDAVSAAERAFSPDQVEKSDGLLEIDIDWYLTQQIHPPLSRLCGPIEGTDPA 1099
Query: 1021 RIAECLGLDTSLYRSQIK-ESIQQSEENILGVGEA---EEVKYQFCDKFEFTCMNPSCKQ 1076
+IAECLGL+ + ++S + E +QS ++ V ++ ++ K++ C+ TC P C +
Sbjct: 1100 QIAECLGLNPAKFQSHVATEGDEQSLDSFSFVPKSLMDDDEKFKNCEPLVVTC--PWCTK 1157
Query: 1077 VNTVEAPTRLSTHGVVFVL---------------DECINPECKVPPYTY----------- 1110
HG L + + P V P +
Sbjct: 1158 A--------FVFHGAGLKLPGNQKADKGKEKEDEESLLLPSGAVRPSDFKCAKCGHVRFE 1209
Query: 1111 LPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYK------ 1164
+ N ++ + K+I +YYE WL C DP C L R L ++ C K
Sbjct: 1210 AGKISNLVTLQIRKHIKRYYEQWLVCTDPTCR-LRTRTDYKLGSKGTIKCRAKKNGATCN 1268
Query: 1165 --LHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE---TYMGYCKMKQHVERF 1219
++ Y+E L+ QL ++ + D++K LT+ S + + Y +K+ VE F
Sbjct: 1269 NVMNIEYSEKDLHNQLQYYARLFDLSK-LTEEQKLSFNSNPDPDRLAKSYEVVKKGVETF 1327
Query: 1220 LESSAYNIVDLKKLFS 1235
+ +SAY VDL F+
Sbjct: 1328 VSASAYRYVDLGSFFA 1343
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 141/268 (52%), Gaps = 30/268 (11%)
Query: 353 EPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFV-KEN 411
+P T + V + D LPL D ++LDA E+ PG V++FGKV V K
Sbjct: 188 QPDTQQASV-TVAMDTDLPLEKDGS----LLFYWLDAAEEKQVNPGVVFMFGKVCVNKTT 242
Query: 412 NSHSSCCVIVQNIDRKIYLLPRSEHL-----KTKEPVSIAQVYSEFDQIATQYKILDFKS 466
N +SCC+ +N+ R ++++PR + L +T PV++ V +E + +Y + +
Sbjct: 243 NQFASCCITARNVPRSLFVVPRQKMLDDQRQETDTPVTMQDVRAEIGSLRKEYNMGQLRM 302
Query: 467 RKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLER 525
+ + +KY F+ GVP S++L+V S+ LP++LSG +FSH+FG +S E+LL++R
Sbjct: 303 KSVRRKYPFDKEGVPRGESDFLKVICSSSV-HLPANLSGQSFSHIFGATTSATESLLIKR 361
Query: 526 KIKGPSWLEFPEA-------EKFPSRISWCKYEVQCNQMEKIRITNVCGNVLS-RTLMGG 577
+ GP WL+ + +I+WCK+E + + I NVL+ GG
Sbjct: 362 HLMGPGWLKITNVAEDNAKLRRGVQQITWCKFEGHVDNITDI-------NVLTPDQCPGG 414
Query: 578 RSERNEFLLLHAFHEKSYVLPDKQYGKN 605
R R L++ A H KS++ + GKN
Sbjct: 415 RLPREPALVVMALHIKSHL--NTNAGKN 440
>gi|340905438|gb|EGS17806.1| DNA polymerase alpha catalytic subunit-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1495
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 260/670 (38%), Positives = 387/670 (57%), Gaps = 58/670 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKKEGEETGEANKGK 619
+TN+ GN +RTL G R+ERNEF+LLH F + Y+LPDK G+ + + E +
Sbjct: 786 LTNLAGNSWARTLTGTRAERNEFILLHEFKKAGYILPDKIPAKGRARVDEENQDDDGGEG 845
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
G+KK Y GGLV EP+KG YDK++++MDFNSLYPSIIQEYNICFTT+ L D +
Sbjct: 846 GKKKDKYKGGLVFEPEKGLYDKYVLVMDFNSLYPSIIQEYNICFTTVDRSNLSDDE--DA 903
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P D GILP + KLV+ RR+VK LMK P + + L +DIRQ ALKLTANSMY
Sbjct: 904 VPAVPGKDRDQGILPRLLGKLVDRRREVKKLMKTPRATPEQLATWDIRQLALKLTANSMY 963
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ SRF+A+PLA L+T KGREIL +TK+L E+++ +VIYGDTDS+MI+ NV++ +
Sbjct: 964 GCLGYTKSRFYARPLAVLITYKGREILRSTKALAESMSLQVIYGDTDSVMINANVDNVLA 1023
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
++GN++K E NKLYK+LE+DID V++ +LL KKKYAA+++ + NG+ + E+KG+
Sbjct: 1024 AIEVGNKLKQEVNKLYKRLEIDIDNVFRRILLQAKKKYAAINMVE-ENGRWVEKMEVKGL 1082
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+ RR++ L+ E K ++ +IL T+ S +Q +H+++++I + G +PL
Sbjct: 1083 DMRRREYCPLSREVSKRILDEILSGDD-TEVS----VQRVHKYLREISAKMREGAIPLNK 1137
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT--- 976
I QL KAP+EY + ++P VQVALR K +++GD +SYII + + + +
Sbjct: 1138 YIILTQLGKAPKEYPNADSMPQVQVALR-EMARGKVMRRGDVVSYIITTNKNNTSGSDSL 1196
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+RAY ++ +K +S L DV +Y+ +QI P V RL I GT A ++AE LGLD
Sbjct: 1197 PPAKRAYTPQDVMKADSGLVPDVEWYIGKQIMPPVERLCANIVGTSATQLAENLGLDPRH 1256
Query: 1033 YRS------QIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL 1086
Y + ++ + E + L + +++ C + C +CK + E L
Sbjct: 1257 YANNRSAAYNTADAARDLEIHPLESQIPDHIRFSNCARLTLRCR--ACKHLFPFEGLLPL 1314
Query: 1087 STHGV------------VFVLDECINPECK--VPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
+ P C +P T L+ ++ + +YYE
Sbjct: 1315 PASDAQQQKEAAEEQNKIITPSGIHCPSCSALLPTLT----LVAQVETAVRAQTARYYET 1370
Query: 1133 WLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHY 1183
WL C+D C + TR RC P GL R C ++++ E ++Y QL +F
Sbjct: 1371 WLTCDDASCGNRTRQMSVYGTRCLGPRGL-ARDCLGRMRFEM----GEREMYNQLVYFAG 1425
Query: 1184 ICDITKALTK 1193
+ D+ KA K
Sbjct: 1426 LWDVDKARKK 1435
Score = 179 bits (454), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 278/584 (47%), Gaps = 65/584 (11%)
Query: 53 DKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGG 111
+K NKFA + L+ G+ V Y+ E++YEEV E +Y + V R +DD++ DD G
Sbjct: 5 NKRNKFAELRALRQ-AGKKVFDTYQVAEVEDLYEEVDENQYKKIVRARLNQDDFVVDDNG 63
Query: 112 DGYVEDGREIFD--------DDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPV 163
+GYV+DGRE +D DD V K K+ K+++ + + + DI +
Sbjct: 64 EGYVDDGREEWDHEEYYSDEDDEVSVRGKDRKNKKQREQEQAKRDASDRDITEYFTRGAA 123
Query: 164 KKKKKEEVQLNNDD--VLADLLSEVNTTIAPTL----KLNTKTNEIVIPKEEPPAPTAKE 217
K +KK + +D LADLL EV+ + L K ++ E + P P A+
Sbjct: 124 KPQKKPKPVKTEEDEKFLADLLGEVDANVPAPLPRIPKKRDRSAERRKVRALSPLPEARP 183
Query: 218 YLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQM 277
+A K K ++ P+ + +D + +V + P+ D + E+
Sbjct: 184 PVA------KRTKMLDGSASSPPAIHDAAMIEDDGFIP---SVESEPAAAPMSDIVMEEP 234
Query: 278 QIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSS-AVELSTSPPPQV 336
+++ +S ++ V Q + +++IE +++ ++V + +V++ +V LS S +
Sbjct: 235 ELEPLPSSPVSKVV---QRRTQVKIEP--DDDVDDLMEVAHAGAVTTTSVNLSGSRQARK 289
Query: 337 VEKKEHKCAEWEAIQTEPSTSEPQVHSRTADD-----SLPLATDHENKKVFRMFFLDAFE 391
+ K E + PS EP+V + + ++ ++ E K ++ + DA E
Sbjct: 290 IPKPEPHSVPASSSPVRPS--EPEVDASAWNSINQKLNVVSSSPTEAKTFGKIHYTDAIE 347
Query: 392 ----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK--- 438
D + G++ LFGKV K+ N + SC V V NI RK+Y LPR ++
Sbjct: 348 EDGSLHFYWTDYTELNGSLCLFGKVLNKKKNHYVSCFVKVDNILRKLYFLPRKYRMRNGV 407
Query: 439 -TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA 497
T EPV + VY+E D + T+ + K + +KKYAF LPG+P +EYL++ Y P
Sbjct: 408 ETDEPVEMMDVYNEVDALMTKLGVDMHKIKPRKKKYAFELPGIPSEAEYLKLMYPYTKPQ 467
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCN 555
+ +G+TFSHVFGT ++ E +L R I GP WL+ +A+ F + S C+ EV +
Sbjct: 468 IELGKTGETFSHVFGTNTALFEQFVLWRNIMGPCWLKIEDAD-FGALKNASHCRLEVLVS 526
Query: 556 QMEKIRITN----------VCGNVLSRTLMGGRSERNEFLLLHA 589
+ + I +V RT+ R + E L + A
Sbjct: 527 RPDSISPIGDSESTDAPPLTLMSVAIRTIFNARDNKQEILAISA 570
>gi|302509736|ref|XP_003016828.1| hypothetical protein ARB_05121 [Arthroderma benhamiae CBS 112371]
gi|291180398|gb|EFE36183.1| hypothetical protein ARB_05121 [Arthroderma benhamiae CBS 112371]
Length = 1467
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 260/652 (39%), Positives = 378/652 (57%), Gaps = 47/652 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-GEANKGKG 620
+TN+ GN SRTL G R+ERNE++LLH F+ Y+ PDK K + + EE GE +
Sbjct: 783 LTNLAGNSWSRTLSGTRAERNEYILLHEFYRGKYICPDKYGHKTQIKIEENEGEEDGADK 842
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK +++MDFNSLYPSIIQE+NICFTT+ ++D
Sbjct: 843 KKKEKYKGGLVFEPEKGLYDKHVLVMDFNSLYPSIIQEFNICFTTVDRHASSENDREESV 902
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ GILP I LV RR+VK LMK + + + L +D +Q ALKLTANSMYG
Sbjct: 903 PEVPDSDQPLGILPRLIATLVSRRREVKKLMKDKSATPEELALWDTKQLALKLTANSMYG 962
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ N ++
Sbjct: 963 CLGYTQSRFYARPLAMLTTFKGREILRNTKELAETNQLRVIYGDTDSVMINTNTDNVQEA 1022
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN+ K N+ Y+ LE+DID V+K +LL KKKYAA+++S++ +GK + E+KG+D
Sbjct: 1023 LKVGNEFKRLVNQRYRLLEIDIDNVFKRLLLHAKKKYAAINLSEV-DGKYVEHLEVKGLD 1081
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVPL 917
+ RR++ L+ E ++ +IL S DD L IH++++++ + +P+
Sbjct: 1082 MKRREFCALSKEVSTKLLHEIL--------SGDDVEVVLNKIHDYLRELAQKMHEYAIPV 1133
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT- 976
I +L+K P+EY +++ +P QVALR K ++ D ISYI+ G SE ++
Sbjct: 1134 QKYVIYTKLSKKPDEYPNKETMPPAQVALR-ELARGKSVRPNDVISYIVTL-GDSETSSL 1191
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+R+Y +++ +K +S LK DV +YL +QI P + RL PI GTDA R+AECLGLD
Sbjct: 1192 QPAKRSYTLQDVIKPDSGLKPDVEFYLLKQIFPPIERLCAPIPGTDAARLAECLGLDVRK 1251
Query: 1033 YR--SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHG 1090
Y+ S Q++E L + ++++ + C C++ +T E G
Sbjct: 1252 YQISSNATHGQQETELCALESQIPDSIRFEKAARLNLQCR--FCRKKSTFE--------G 1301
Query: 1091 VVFVLDEC-----INPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+V D C + PE + ++ +L + +YYEGWL C+D C + T
Sbjct: 1302 LVASRDMCSPNGLLCPEPSCGKAFTVISIVAQLESQIRAQTAQYYEGWLVCDDSACGNRT 1361
Query: 1146 R-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
R RC LG + R C ++H Y+E QLY QL +F + D+ KA
Sbjct: 1362 RQMSVYGQRC-LGPRGR-AEGCLG-RMHYEYSEKQLYNQLLYFAGLWDVEKA 1410
Score = 152 bits (385), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 252/557 (45%), Gaps = 84/557 (15%)
Query: 61 FQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVED 117
++L+ L+ G K YE DE++YE+V E+ Y + V KR DD++ DD G+GY +D
Sbjct: 8 LEELRALRASGKKRLSTYEIQEDEDIYEQVDEEGYKKVVRKRLDRDDFVVDDNGEGYADD 67
Query: 118 GREIFDD--------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKE 169
GRE +DD D + +P + + ++++ N + I K K+ K
Sbjct: 68 GREEWDDTRLAASDSDSDGLPVRGKAAKRKREEDNKKKEEINNGINKYFTATLTKQASKP 127
Query: 170 EVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIK 227
+ DD LAD+L +V T IAP LN P K + + ++
Sbjct: 128 KPVATADDEAFLADILGDVETNIAP---LNV--------------PVKKSVKSETRRKVR 170
Query: 228 VEKKIEKPIKKEPSPLKDEI-KSNDSVMEVEMNVAEQSKEEPV--DDGLWEQMQIDDWDN 284
+ + P + +P K EI + NDS + + A+ E+ V D G DD
Sbjct: 171 I---VSPPAQPKPRVKKTEIDQENDSPHPKDNSAADVEFEDDVFLDGG------DDDAIM 221
Query: 285 SQQTQDVLPEQAKVELQIEAI--ESQSIEEKVD---------------VTNVESVSSAVE 327
S+Q P + VE + Q + +K + V + + + +V
Sbjct: 222 SEQPLPSSPVASAVERKTAGTSRSKQVVIKKEEDDDDGDDDMLDVAEAVADHSANTPSVN 281
Query: 328 LSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRM--F 385
+ PP V+K+ + + + + P+ + ++ + ++ + + + N V M F
Sbjct: 282 MVGKRPPPKVKKEVYD----DPMASSPARATTEMINPSSWNDVTNKLNVLNSSVTDMQRF 337
Query: 386 FLDAFEDIYKQPGTVYLFGKVFVKENNS--------------HSSCCVIVQNIDRKIYLL 431
++ ++ G++ F + + N S + S V V NI RK+Y L
Sbjct: 338 GKLTCQEAVEEDGSLRFFWLDYTEINGSLCLFGKVKNKTNNNYVSAFVKVDNILRKLYFL 397
Query: 432 PRS-EHLK---TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYL 487
PR ++++ T E V + VY E D I ++ K+ K + +KYAF LP +P +EYL
Sbjct: 398 PREYKYIRGQTTSEEVDMEDVYGEVDNIMSRSKVEMHKIKPCTRKYAFELPDIPKEAEYL 457
Query: 488 EVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRIS 546
++ Y PALP +L G+TFSHVFGT ++ E +L + I GP WL+ +A+ + S
Sbjct: 458 KLMYPYTKPALPMELKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTAVNGAS 517
Query: 547 WCKYEVQCNQMEKIRIT 563
WCK E Q +I +
Sbjct: 518 WCKLECQVTNPAEISLV 534
>gi|119178034|ref|XP_001240726.1| hypothetical protein CIMG_07889 [Coccidioides immitis RS]
gi|392867311|gb|EAS29457.2| DNA polymerase (pol2) [Coccidioides immitis RS]
Length = 1463
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 269/708 (37%), Positives = 410/708 (57%), Gaps = 62/708 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE-TGEANKGKG 620
+TN+ GN +RTLMG R+ERNE++LLH F+ Y+ PDK +G+++ + EE GE + G
Sbjct: 780 LTNLAGNSWARTLMGTRAERNEYILLHEFYRNKYICPDKYFGRSQPKMEEYEGEDDGGDK 839
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK++++MDFNSLYPSIIQEYNICFTT+ ++ +++
Sbjct: 840 KKKDKYKGGLVFEPEKGLYDKYVLVMDFNSLYPSIIQEYNICFTTVNRELVSENENEEKV 899
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P Q + GILP I LV RR+VK LMK + + L +D +Q ALKLTANSMYG
Sbjct: 900 PEVPADQ-EQGILPRLISTLVSRRREVKKLMKNKRATPEELALWDTKQLALKLTANSMYG 958
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ NV++ +
Sbjct: 959 CLGYTQSRFYARPLAMLTTFKGREILQNTKELAEKNQLRVIYGDTDSVMINTNVDNMEEA 1018
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN+ K N YK LE+D+D V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1019 LKVGNEFKRLVNDSYKLLEIDVDNVFRRLLLHAKKKYAAINMTEV-DGKYVDHLEVKGLD 1077
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLDNGFVPL 917
+ RR++ L+ E ++++IL S DD L ++++++++ + +P+
Sbjct: 1078 MKRREYCTLSKEVSSKLLTEIL--------SGDDTEVVLGKVYDYLRELTQKMKEFTIPV 1129
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT- 976
I +L+K P+EY +++ +P VQVALR K ++ D ISYI+ G SE ++
Sbjct: 1130 QKYVIFTKLSKRPDEYPNKETMPPVQVALR-ELARGKTVRPNDVISYIVTS-GDSETSSL 1187
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+R+Y ++ +K +S LK D+ YYL +QI P + RL PI GTDAV++AECLGLD
Sbjct: 1188 QPAKRSYTPQDVMKPDSGLKPDIEYYLLKQIFPPIERLCAPIPGTDAVQLAECLGLDVRK 1247
Query: 1033 YRSQIKESIQQSEENI----LGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTR 1085
Y QI S + ++ L + ++++ +F C +C + E T
Sbjct: 1248 Y--QINTSSSHGQRSLELCPLESQIPDSLRFEKAARFTLRCR--ACHERTVFEGLNISTD 1303
Query: 1086 LST-HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDL 1144
+ T G+V C N C+ P++ + ++ +L + +YYEGW+ C+D C +
Sbjct: 1304 ICTPKGLV-----CPNSNCR-KPFSVI-SIVAQLESQIRAQTTRYYEGWIVCDDSACGNR 1356
Query: 1145 TR-------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSD 1195
TR RC LG + R C Y+ YT+ QLY QL +F + D+ KA ++
Sbjct: 1357 TRQMSVYGHRC-LGPRGRAEGCLGRMSYE----YTDKQLYNQLLYFATLWDVDKAKATAE 1411
Query: 1196 TPSIKFDSETYMG--------YCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ E + + MK V+ +L+ V++ LF
Sbjct: 1412 KEASGEKKEKVLALVEWNRTRFGTMKGVVDEYLKKCGRQWVEMDVLFG 1459
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 155/567 (27%), Positives = 256/567 (45%), Gaps = 80/567 (14%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE + ++YEEV E+ Y V +R DD++ DD G+GY
Sbjct: 6 AKLAELRALRASGKKRLATYEVEEEGDIYEEVDEEGYKNVVRQRLDRDDFVVDDNGEGYA 65
Query: 116 EDGREIFDDDIE-------DVPQKKEKHDKRKKNKNIQN-PNAKGDIQKLLANM---PVK 164
+DGRE +DD D P + K KRK+ ++ Q I K +
Sbjct: 66 DDGREEWDDRRRVDSGTDSDGPPLRGKAAKRKREEDKQRREKINNGINKYFSGAYGTSNA 125
Query: 165 KKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K K ++ +ADLL EV+ + P+ +P ++P + + S
Sbjct: 126 SKPKRNATAEDEAFMADLLGEVDVNVVPSR----------VPVKKPVKSETRRKVRIISP 175
Query: 225 PIKVEKKIEK-PIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWD 283
P+ E+ +K KKEP+P + D M+ +++ + PV D E + + D
Sbjct: 176 PLSQERTPKKVQAKKEPTP-----HNADVEMKSDIDFDDDVGLLPVGDD--EDVPMSDPP 228
Query: 284 NSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESV------SSAVELSTSPPPQVV 337
S + + ++ E + I+++ D+ +E+ ++ V +++ P +
Sbjct: 229 PSSPVAKAVERKNASLVKKEEESADDIDDE-DLVTIEATGHHENNATRVNMASKRPAPKL 287
Query: 338 EKKEHKCAEWEAIQTEPSTSEPQVHSRTADD--------------SLPLATDHENKKV-- 381
+ KE + P+TS P + A D S P + H K+
Sbjct: 288 KVKE-------SFYPSPATSPPARANSDAIDASSWTDITRKLNVLSSPASDMHAFGKLRA 340
Query: 382 ---------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
R F+LD E G++ LFGKV K ++ S V + NI RK+Y LP
Sbjct: 341 QDAVETDGSLRFFWLDYTE----VNGSLCLFGKVKDKRSSRFVSAFVKIDNILRKLYFLP 396
Query: 433 RSEHL----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
R L T + + + V +E D++ T+ ++ K + +KYAF LP +P ++YL+
Sbjct: 397 REYRLHHGQNTDDEIDMEDVSNEVDELMTKLRVNVHKIKPCTRKYAFELPNIPKKAQYLK 456
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISW 547
+ Y P LP+D+ G+TFSHVFGT ++ E +L + I GP WL+ +A+ S SW
Sbjct: 457 LMYPYDKPVLPTDVKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTAVSGASW 516
Query: 548 CKYEVQCNQMEKIRITNVCGNVLSRTL 574
CK E Q +Q I + N+ + TL
Sbjct: 517 CKLECQVSQPALISSVSDAENLDTPTL 543
>gi|326471235|gb|EGD95244.1| DNA polymerase alpha catalytic subunit [Trichophyton tonsurans CBS
112818]
Length = 1467
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 261/652 (40%), Positives = 376/652 (57%), Gaps = 47/652 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-GEANKGKG 620
+TN+ GN SRTL G R+ERNE++LLH F+ Y+ PDK K + + EE GE +
Sbjct: 783 LTNLAGNSWSRTLSGTRAERNEYILLHEFYRGKYICPDKYGHKTQIKVEENEGEEDGADK 842
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK +++MDFNSLYPSIIQE+NICFTT+ ++D
Sbjct: 843 KKKEKYKGGLVFEPEKGLYDKHVLVMDFNSLYPSIIQEFNICFTTVDRHASSENDREESV 902
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ GILP I LV RR+VK LMK + + + L +D +Q ALKLTANSMYG
Sbjct: 903 PEVPDSDQPLGILPRLIATLVSRRREVKKLMKDKSATPEELALWDTKQLALKLTANSMYG 962
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ N +
Sbjct: 963 CLGYTQSRFYARPLAMLTTFKGREILRNTKELAETNQLRVIYGDTDSVMINTNTDSVQEA 1022
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ YK LE+DID V+K +LL KKKYAA+++S++ +GK + E+KG+D
Sbjct: 1023 LKVGNDFKRLVNQRYKLLEIDIDNVFKRLLLHAKKKYAAINLSEV-DGKYVEHLEVKGLD 1081
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVPL 917
+ RR++ L+ E ++ +IL S DD L IH++++++ + +P+
Sbjct: 1082 MKRREFCALSKEVSTKLLHEIL--------SGDDVEVVLNKIHDYLRELAQKMHEYAIPV 1133
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT- 976
I +L+K P+EY +++ +P QVALR K ++ D ISY++ G SE ++
Sbjct: 1134 QKYVIYTKLSKKPDEYPNKETMPPAQVALR-ELARGKSVRPNDVISYVVTL-GDSETSSL 1191
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+R+Y +++ +K +S LK DV +YL +QI P + RL PI GTDA R+AECLGLD
Sbjct: 1192 PPAKRSYTLQDVIKPDSGLKPDVEFYLLKQIFPPIERLCAPIPGTDAARLAECLGLDVRK 1251
Query: 1033 YR--SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHG 1090
Y+ S Q++E L + ++++ + C C++ +T E G
Sbjct: 1252 YQISSNATHGQQETELCALESQIPDSIRFEKAARLNLQCR--FCRKKSTFE--------G 1301
Query: 1091 VVFVLDEC-----INPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+V D C I PE + ++ +L + +YYEGWL C+D C + T
Sbjct: 1302 LVASRDMCSPNGLICPEPSCGKVFTVISIVAQLESQIRAQTAQYYEGWLVCDDSACGNRT 1361
Query: 1146 R-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
R RC LG + R C ++H Y+E QLY QL +F + D+ KA
Sbjct: 1362 RQMSVYGQRC-LGPRGR-AEGCLG-RMHYEYSEKQLYNQLLYFAGLWDVEKA 1410
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 102/187 (54%), Gaps = 9/187 (4%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS----EHL 437
R F+LD E G++ LFGKV K NNS+ S V V NI RK+Y LPR
Sbjct: 352 LRFFWLDYTE----INGSLCLFGKVKNKTNNSYVSAFVKVDNILRKLYFLPREYKYVRGQ 407
Query: 438 KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA 497
T E V + VY E D I ++ K+ K + +KYAF LP +P +EYL++ Y PA
Sbjct: 408 STSEEVDMEDVYGEVDNIMSRSKVEMHKIKPCTRKYAFELPDIPKETEYLKLMYPYTKPA 467
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQ 556
LP +L G+TFSHVFGT ++ E +L + I GP WL+ +A+ + SWCK E Q
Sbjct: 468 LPMELKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTAVNGASWCKLECQVTN 527
Query: 557 MEKIRIT 563
I +
Sbjct: 528 PADISLV 534
>gi|326479330|gb|EGE03340.1| DNA polymerase alpha catalytic subunit [Trichophyton equinum CBS
127.97]
Length = 1467
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 261/652 (40%), Positives = 376/652 (57%), Gaps = 47/652 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-GEANKGKG 620
+TN+ GN SRTL G R+ERNE++LLH F+ Y+ PDK K + + EE GE +
Sbjct: 783 LTNLAGNSWSRTLSGTRAERNEYILLHEFYRGKYICPDKYGHKTQIKVEENEGEEDGADK 842
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK +++MDFNSLYPSIIQE+NICFTT+ ++D
Sbjct: 843 KKKEKYKGGLVFEPEKGLYDKHVLVMDFNSLYPSIIQEFNICFTTVDRHASSENDREESV 902
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ GILP I LV RR+VK LMK + + + L +D +Q ALKLTANSMYG
Sbjct: 903 PEVPDSDQPLGILPRLIATLVSRRREVKKLMKDKSATPEELALWDTKQLALKLTANSMYG 962
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ N +
Sbjct: 963 CLGYTQSRFYARPLAMLTTFKGREILRNTKELAETNQLRVIYGDTDSVMINTNTDSVQEA 1022
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ YK LE+DID V+K +LL KKKYAA+++S++ +GK + E+KG+D
Sbjct: 1023 LKVGNDFKRLVNQRYKLLEIDIDNVFKRLLLHAKKKYAAINLSEV-DGKYVEHLEVKGLD 1081
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVPL 917
+ RR++ L+ E ++ +IL S DD L IH++++++ + +P+
Sbjct: 1082 MKRREFCALSKEVSTKLLHEIL--------SGDDVEVVLNKIHDYLRELAQKMHEYAIPV 1133
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT- 976
I +L+K P+EY +++ +P QVALR K ++ D ISY++ G SE ++
Sbjct: 1134 QKYVIYTKLSKKPDEYPNKETMPPAQVALR-ELARGKSVRPNDVISYVVTL-GDSETSSL 1191
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+R+Y +++ +K +S LK DV +YL +QI P + RL PI GTDA R+AECLGLD
Sbjct: 1192 PPAKRSYTLQDVIKPDSGLKPDVEFYLLKQIFPPIERLCAPIPGTDAARLAECLGLDVRK 1251
Query: 1033 YR--SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHG 1090
Y+ S Q++E L + ++++ + C C++ +T E G
Sbjct: 1252 YQISSNATHGQQETELCALESQIPDSIRFEKAARLNLQCR--FCRKKSTFE--------G 1301
Query: 1091 VVFVLDEC-----INPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+V D C I PE + ++ +L + +YYEGWL C+D C + T
Sbjct: 1302 LVASRDMCSPNGLICPEPSCGKVFTVISIVAQLESQIRAQTAQYYEGWLVCDDSACGNRT 1361
Query: 1146 R-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
R RC LG + R C ++H Y+E QLY QL +F + D+ KA
Sbjct: 1362 RQMSVYGQRC-LGPRGR-AEGCLG-RMHYEYSEKQLYNQLLYFAGLWDVEKA 1410
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 102/187 (54%), Gaps = 9/187 (4%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS----EHL 437
R F+LD E G++ LFGKV K NNS+ S V V NI RK+Y LPR
Sbjct: 352 LRFFWLDYTE----INGSLCLFGKVKNKTNNSYVSAFVKVDNILRKLYFLPREYKYVRGQ 407
Query: 438 KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA 497
T E V + VY E D I ++ K+ K + +KYAF LP +P +EYL++ Y PA
Sbjct: 408 STSEEVDMEDVYGEVDNIMSRSKVEMHKIKPCTRKYAFELPDIPKETEYLKLMYPYTKPA 467
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQ 556
LP +L G+TFSHVFGT ++ E +L + I GP WL+ +A+ + SWCK E Q
Sbjct: 468 LPMELKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTAVNGASWCKLECQVTN 527
Query: 557 MEKIRIT 563
I +
Sbjct: 528 PADISLV 534
>gi|255950462|ref|XP_002565998.1| Pc22g21010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593015|emb|CAP99389.1| Pc22g21010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1461
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/703 (36%), Positives = 401/703 (57%), Gaps = 52/703 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN GN +RTL G R+ERNE++LLH FH Y+ PDK + +K E+ + + +
Sbjct: 776 LTNTAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSRLQKAEEKMQDGDDDEAL 835
Query: 622 KKAAYS---GGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
K GGLV EP+KG YD+F+++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 836 DKKKKDKFKGGLVFEPEKGLYDRFVLVMDFNSLYPSIIQEYNICFTTVDRTATAENENEE 895
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + + G+LP I LV RR+VK LMK + + L +D +Q ALKLTANSM
Sbjct: 896 KVPDVPSSEQEQGVLPRLIATLVNRRREVKKLMKDKRATPEQLAIWDTKQLALKLTANSM 955
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL NTK L E+ VIYGDTDS+MI+ N+++
Sbjct: 956 YGCLGYTQSRFYARPLAMLTTFKGREILRNTKELAESQQLRVIYGDTDSVMINTNMDNMS 1015
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1016 DAIKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAVNLTEV-DGKYVEKLEVKG 1074
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E ++++IL + + L IHE+++++ + +P+
Sbjct: 1075 LDMKRREYCSLSKEVSSKLLNEILSGEDQ-----EVVLNKIHEYLRELAGRMKEYTIPVQ 1129
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT-- 976
I +L+K P+EY +++++P QVALR K ++ D ISYI+ +G SE ++
Sbjct: 1130 KYVIYTKLSKRPQEYPNKESMPPAQVALR-EIARGKTVRPNDVISYIVT-NGDSETSSLP 1187
Query: 977 --QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+R+Y+ ++ LK +S L+ DV +Y+ +QI P + RL PI GTDAVR+AECLGLDT Y
Sbjct: 1188 PAKRSYSPQDVLKPDSGLRPDVEFYILKQIFPPIERLCAPIPGTDAVRLAECLGLDTRKY 1247
Query: 1034 RSQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS---- 1087
+ S Q I + + V++ + C CK+ + E S
Sbjct: 1248 QINTSSSSGQQNAEITPLESQIPDSVRFANSKRLSLRCR--YCKEQSVYEGLVTSSHMCT 1305
Query: 1088 THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
HG++ C N C+ P++ + ++ +L + + I +YYEGWL C+D C + TR
Sbjct: 1306 AHGII-----CPNQSCQ-KPFSVM-TIVAQLENQIREQISRYYEGWLVCDDSSCGNRTRQ 1358
Query: 1147 ------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS 1198
RC LG + R C Y+ Y+E ++Y QL +F + D+ KA ++ +
Sbjct: 1359 ISVYGHRC-LGPRGRAEGCLGRMSYE----YSEKEVYNQLLYFAGLWDVEKAKVAAEKET 1413
Query: 1199 I-KFDSETYMG------YCKMKQHVERFLESSAYNIVDLKKLF 1234
K DS + + +K V+ +L+ V++ LF
Sbjct: 1414 GEKKDSVAALAEFNRTRFGTIKGVVDSYLKKCGRQWVEMDGLF 1456
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 193/712 (27%), Positives = 314/712 (44%), Gaps = 146/712 (20%)
Query: 61 FQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVED 117
+L+ L+ G K YE ++Y+EV + Y + + R +DD++ DD G GY +D
Sbjct: 8 LAELRALRASGKKRISTYEVEDQGDIYDEVDDDGYKKVIRNRLDQDDFVVDDNGAGYADD 67
Query: 118 GREIFD--------DDIEDVPQK---------KEKHDKRKKNKNIQNPNAKGDIQKLLAN 160
GRE+++ D+ +++P + +E+ K K N I KG + A+
Sbjct: 68 GREVWNEQTAEYDSDESDELPTRGKAAKRKREEEQQRKEKMNNGISKYFNKG---QAAAS 124
Query: 161 MPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLA 220
P K+K +D +ADLL EV+ + + + T IV K E A+ +
Sbjct: 125 AP---KRKPVATAEDDAFMADLLGEVDANVVSS---HAPTRNIV--KSE-----ARRKVR 171
Query: 221 NFSKPIKVEKKIEKPIKKE-----PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWE 275
S P+ +++ EK K+ SP+KD+ +D + DDG
Sbjct: 172 VLSPPLSEKRRHEKIHAKDENDMPSSPMKDQTLHSDDL----------------DDGPLP 215
Query: 276 QMQIDDWDNSQQTQDVLPE-------QAKVELQIEAIESQSIEEKVDVTNVESVSSAVEL 328
DD S D+LP + + + ++A E + ++ VD+ +V V+ L
Sbjct: 216 MPDDDDVPMS----DILPSSPISKAVERRNTVPVKAEEPE--DDDVDLMDVAEVTGDSSL 269
Query: 329 STS--------PPPQ--------------VVEKKEHKCAEWEAIQTEP---STSEPQVHS 363
T PPP+ V E A W ++++ S+ P++ S
Sbjct: 270 KTKTINMTGSRPPPKIKYEVASTPEGSSPVKSMPEVMDASWNDVRSKLNVLSSPAPEMRS 329
Query: 364 ---RTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVI 420
A D + E+ R+F+LD E G++ LFGKV K+N S++S V
Sbjct: 330 FGKLRAQDVV------EDDGSLRIFWLDYTE----VNGSLCLFGKVKNKQNGSYTSAFVK 379
Query: 421 VQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFN 476
V NI RK+Y LPR K T+E V + VYSE D++ ++ K+ K + E+KYAF
Sbjct: 380 VDNILRKLYFLPREYRYKHGRATEEEVGMQDVYSEVDEMMSKLKVGMHKMKPCERKYAFE 439
Query: 477 LPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP 536
+PGVP +EYL++ Y ALP + G+TFS+VFGT +S E +L + I GP WL+
Sbjct: 440 MPGVPKEAEYLKLLYPYDKAALPMETKGETFSNVFGTNTSLFEQFVLWKNIMGPCWLKID 499
Query: 537 EAE-KFPSRISWCKYEVQCNQMEKIRITNVCGNV---------LS-RTLMGGRSERNEFL 585
+A+ + SWCK+E Q + I + N+ LS RT + + + E L
Sbjct: 500 QADFAAVTNASWCKFECQATKPALISLVPDSENLDAPPLTLMSLSFRTQLNVKENKQEIL 559
Query: 586 LLHA--FHEKSYV-------LPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKK 636
+ A + + S LP K + + G + + RK+ G ++LE +
Sbjct: 560 VASARVYEDVSLTDTTPPEKLPCKTFTVMRPAGGSYPMHFEAEARKQ---RGTVILERSE 616
Query: 637 GFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQV 688
F + M F + P +I + LQD D+ L + E +
Sbjct: 617 QFLLSRFLAM-FEKMDPDVIMGHQ----------LQDVDLGILLSRMREKKT 657
>gi|320580849|gb|EFW95071.1| DNA-directed DNA polymerase alpha [Ogataea parapolymorpha DL-1]
Length = 1421
Score = 428 bits (1100), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/667 (37%), Positives = 382/667 (57%), Gaps = 46/667 (6%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ + VQ + K ++TN+ GN + TL G R+ RNE++LLH F + Y++PDK+
Sbjct: 706 IAEVAFRVQILSLSK-QLTNLAGNAWAHTLGGTRAGRNEYILLHEFTKNGYIVPDKETRS 764
Query: 605 NKKEG------EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQE 658
++ E+ G+ + KK Y GGLV EP+KG + +I++MDFNSLYPSIIQE
Sbjct: 765 QRQAAAAAAALEQDGDESAATSNKKTKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQE 824
Query: 659 YNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSS 718
+NICFTT+ L D+D+ + P V G+LP +++LV RR+VK L+K P ++
Sbjct: 825 FNICFTTVNRSNLGDNDLPNV----PPSDVAQGVLPRLLQQLVNRRREVKKLLKDPRATA 880
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNY 778
QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT +GREIL++T+ L E++
Sbjct: 881 VEKAQYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNRGREILMDTRQLAESIGL 940
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
V+YGDTDS+MI +++ KIG+ K + N+ Y+ LE+DID V+K +LL KKKYA
Sbjct: 941 RVVYGDTDSVMIDTGSDNFQDAIKIGDDFKIKVNERYRLLEIDIDNVFKRLLLHSKKKYA 1000
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
A++ S ++G E+KG+D+ RR++ L+ E FV+ +IL D +D L
Sbjct: 1001 AMNASMDASGLEKTVLEVKGLDMRRREFCPLSKETSTFVLEKIL-----GDADPEDALNE 1055
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
I+ H++ +R L + +P+ L I +L+K PE+Y K++P VQVALRL K ++
Sbjct: 1056 IYAHLEDVRNKLTDNQIPMHKLTINTRLSKDPEQYPGGKSMPAVQVALRLRK-QGKLVRA 1114
Query: 959 GDTISYIICEDGT--SEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIE 1015
G +++++ + G ++ RA I E L N S+ + D YYL +QI + RLLE IE
Sbjct: 1115 GSVMTFVVTDKGQDDGDSVADRARAISEILANPSQYRPDPYYYLEKQIFAPIERLLERIE 1174
Query: 1016 GTDAVRIAECLGLDTSLY--RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPS 1073
G D VR+A LGLD Y R++ + +E L ++ +++ C C S
Sbjct: 1175 GNDVVRMATALGLDARKYEARARFVQDRVSAELQPLDSTISDSERFRDCKPLALRCT--S 1232
Query: 1074 CK---QVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
C+ + ++A R + V F +C++ + + P + ++L + + I YY
Sbjct: 1233 CRVSFEFGGIQASKR---YQVTFSGVKCLSCQHVLAPLA----ISSQLEHFLRREISAYY 1285
Query: 1131 EGWLKCEDPG-----CSDLTRRCPLGL--KTRLCTTCHKYKLHRVYTELQLYQQLSFFHY 1183
GWL C+D G S RRC +G K C +Y Y + QLY QL +
Sbjct: 1286 AGWLVCDDCGVKTRQVSVYGRRC-IGKNGKAYGCKGIMRY----TYPDKQLYNQLLYIMS 1340
Query: 1184 ICDITKA 1190
+ D+ KA
Sbjct: 1341 LFDVDKA 1347
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 222/503 (44%), Gaps = 59/503 (11%)
Query: 71 GVKHKYEFTADENVYEEVSEKEYTE-RVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDV 129
G+K E E++YEEV E+++ + + + DD+I DD G+GY E G + +D E
Sbjct: 15 GIKLSDEEDGYEDIYEEVDEQQFRQHKQHQLLNDDFIVDDSGNGYAETGADDWDGANEYA 74
Query: 130 PQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTT 189
+ +++ + R++ K + I + K K +V N DD+L+D ++ ++
Sbjct: 75 SEDEDEPEIRQRKKIAKIKRDTPQISSFFKGAETENKPKRKVD-NLDDILSDFTAQASSK 133
Query: 190 IAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKS 249
T N K V + K KP+ V+K + ++E + ++ S
Sbjct: 134 ARSTPMFNVKKRTDVFS-------SLKSDRVRPVKPLDVKKLM---FEEEVPAKRVKLSS 183
Query: 250 NDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQS 309
D + E +++ SK E + ++ I+ E S
Sbjct: 184 EDEIYAPESDISSASKIET-------------------------PSSPIKAAIKEDEEFS 218
Query: 310 IEEKVDVTNVESVSSAVE-LSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADD 368
++++DVT +++ + V+ ++ S ++ EKK + A + TS D+
Sbjct: 219 SDDEIDVTTLKTARADVQRVNLSSTRELKEKKVAEIATSSPTRDASETSMINSTFEKVDE 278
Query: 369 SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKI 428
S D E +MF++D E ++ LFGKV + H SC V V I R+I
Sbjct: 279 SQ--VADSE---TLQMFWMDYAE----VDNSLLLFGKVKTLDGR-HVSCVVQVNGISREI 328
Query: 429 YLLPRSEHLKTKE--PVSIAQVYSEFDQIATQYKILD-FKSRKIEKKYAFNLPGVPDLSE 485
Y LPR L + P + V+ E + LD K++ KK+AF L +P +E
Sbjct: 329 YFLPRESRLDEDDGPPPTAMDVHEEIIPLLLDKFGLDRIKAKPETKKWAFELENIPKETE 388
Query: 486 YLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK 540
YL+V + P LPS L G+TF HVFG ++ E +++R + GP WLE A+
Sbjct: 389 YLKVLLPFQTPKSRNTVLPSTLEGETFRHVFGANANIFETFVVQRNVMGPCWLEIKGAD- 447
Query: 541 FPS--RISWCKYEVQCNQMEKIR 561
F + S C+ EV +I+
Sbjct: 448 FSAIKNSSHCQVEVAVADPAQIK 470
>gi|242787440|ref|XP_002481007.1| DNA polymerase alpha catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
gi|218721154|gb|EED20573.1| DNA polymerase alpha catalytic subunit, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1464
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/700 (37%), Positives = 390/700 (55%), Gaps = 47/700 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK + K EE + +
Sbjct: 780 LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKYSNRQHKATEEKMDDDDDSTD 839
Query: 622 KKAAYS--GGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
KK GGLV EP+KG YD+++++MDFNSLYPSIIQE+NICFTT+ +++
Sbjct: 840 KKKKEKYKGGLVFEPEKGLYDRYVLVMDFNSLYPSIIQEFNICFTTVDRSSTAENENEEK 899
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+P + GILP I LV RR+VK LMK +++ L +D +Q ALKLTANSMY
Sbjct: 900 VPEVPSSDQEQGILPRLIANLVTRRREVKKLMKDKRATTEQLALWDTKQMALKLTANSMY 959
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 960 GCLGYTQSRFYARPLAMLTTFKGREILRSTKDLAESKQLRVIYGDTDSVMINTNMDTISD 1019
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
K+G + K N+ YK LE+DID V++ +LL KKKYAA++++++ +GK I E+KG+
Sbjct: 1020 ALKVGEEFKMSVNERYKLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYIDKLEVKGL 1078
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+ RR++ L+ E K ++ +IL + + L +H++++ I + + +P+
Sbjct: 1079 DMKRREYCALSKEVSKRLLDEILSGEDS-----EVVLNKVHDYLRDIASQMREYKIPVQK 1133
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT--- 976
I +L+K PEEY +++++P QVALR K ++ D I+Y++ +G SE A+
Sbjct: 1134 YVIYTKLSKRPEEYPNKESMPPAQVALR-EIARGKTIRPNDVIAYVVT-NGDSETASLPP 1191
Query: 977 -QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y ++ +K +S+LK D+ YYL +QI P + RL PI GTD VRIA+CLGLD Y+
Sbjct: 1192 PKRSYAPQDVMKPDSELKPDIEYYLLKQIFPPIERLCAPIPGTDPVRIADCLGLDVRKYQ 1251
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQV--NTVEAPTRLSTHG 1090
S Q + I + + V+++ + C + V + S HG
Sbjct: 1252 INSSRSNAQQDAEIYPLESQIPDSVRFEHAARLTLRCRHCGASSVFEGLSSSSNMCSPHG 1311
Query: 1091 VVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR---- 1146
VV C N C T +I ++ + KYYEGWL C+D C + TR
Sbjct: 1312 VV-----CPNEACGKVFSTI--SIIAQVESQIRAQTAKYYEGWLVCDDSSCGNRTRQMSV 1364
Query: 1147 ---RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA--LTKSDTPSI 1199
RC LG + R C Y+ YTE Q+Y QL +F + D+ KA + +
Sbjct: 1365 YGHRC-LGPRGRAEGCLGRMNYE----YTEKQMYNQLLYFAGLWDVDKAKSIAAKEAGEA 1419
Query: 1200 KFDSETYMGYCK-----MKQHVERFLESSAYNIVDLKKLF 1234
K + Y + +K V+ +L+ VD+ LF
Sbjct: 1420 KDNIHALAEYNRAKFATIKGVVDGYLKKCGRQWVDMDTLF 1459
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 153/591 (25%), Positives = 270/591 (45%), Gaps = 70/591 (11%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +LK L+ G K YE ++Y+EV E+ Y + V +R EDD++ DD G+GY
Sbjct: 7 AKLAELKALRASGKKRLSTYEVEDQGSIYDEVDEEGYKKVVRQRLDEDDFVVDDNGEGYA 66
Query: 116 EDGREIFDDDI---------EDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPV--K 164
+DGRE++++D D+P + + ++++ +N + I K +
Sbjct: 67 DDGREVWNEDHIGYSDSEDDGDLPARGKAAKRKREEENQRKEKINNGISKYFSTSSALAA 126
Query: 165 KKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K K ++ +ADLL +V+ I P+ ++ TK +I E + + S
Sbjct: 127 PKPKPVATAEDEAFMADLLGDVDANILPS-RVPTKN---IIKSE------TRRKVRILSP 176
Query: 225 PIKVEKKIEKPIKK-----EPSPLKDEIK-----SNDSVMEVEMNVAEQSKEEPVDDGLW 274
P+ + + KP + P P K ++ +D + + + E P+ D
Sbjct: 177 PLSDKSQKTKPRMRGKGEDTPIPPKQDVNIPDYDDDDGTLALGGDGDENI---PMSDAAL 233
Query: 275 EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPP 334
I + + + EQ ++ + + + + + + +S SS+V ++ S PP
Sbjct: 234 PSSPIS---KAVERKAFKSEQEAIKEEEDEDDMMDVAQATG--HHDSKSSSVNMTGSKPP 288
Query: 335 QVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFE--- 391
++K+ + + P+ E + T+ ++ + EN ++ D E
Sbjct: 289 PKIKKQSYPSPSSSSPPRAPAEVEATWDNVTSKLNVLSSPATENVGFGKVRAQDVIEEDG 348
Query: 392 -------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TK 440
D + GT+ LFGKV K+ ++ S V V NI RK++ LPR +K T
Sbjct: 349 SVQFFWLDYTEVNGTLCLFGKVKNKKTGTYVSSFVKVDNILRKLFFLPREHRMKNGHITD 408
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
E V + VY E D++ T+ K+ K + +KYAF LP +P +YL++ Y P L
Sbjct: 409 EEVDMEDVYEEVDKMMTKLKVGMHKIKPCTRKYAFELPNIPKEGDYLKLLYPYDKPVLSM 468
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQMEK 559
D +G+TFSHVFGT ++ E +L ++I GP WL+ EA+ + SWCK+E Q ++
Sbjct: 469 DTTGETFSHVFGTNTALFEQFVLWKRIMGPCWLKIGEADFSAAANASWCKFECQVSKPNT 528
Query: 560 IRITNVCGNVLS-----------RTLMGGRSERNEFLLLHAFHEKSYVLPD 599
IT + + L RTL+ + + E L+ A ++ LP+
Sbjct: 529 --ITTIPDSELEMPPLTLMSLSFRTLLNVKENKQEILVASARIYENVSLPE 577
>gi|159129478|gb|EDP54592.1| DNA polymerase alpha catalytic subunit, putative [Aspergillus
fumigatus A1163]
Length = 1462
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 260/652 (39%), Positives = 386/652 (59%), Gaps = 45/652 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET---GEANKG 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K +K E+ + + G
Sbjct: 776 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSKLQKAEEKNQDGDDDDAG 835
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 836 DKKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVDRTATAENENEE 895
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + + L +D +Q A KLTANSM
Sbjct: 896 KVPEVPSSDQEQGILPKLIATLVGRRREVKKLMKSKSATPEQLALWDTKQLAFKLTANSM 955
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 956 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTIS 1015
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1016 DALKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAINMTEV-DGKFVDKLEVKG 1074
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + ++++IL S D L L +H++++ + + +P+
Sbjct: 1075 LDMKRREYCALSKEVSQKLLNEIL---SGEDQEL--VLNRVHDYLRDLADKMRGYQIPVQ 1129
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT-- 976
I +L+K PEEY +++ +P QVALR K ++ D ISYI+ +G SE ++
Sbjct: 1130 KYVIYTKLSKRPEEYPNKETMPPAQVALR-ELARGKTIRPNDVISYIVT-NGDSETSSLP 1187
Query: 977 --QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+R+Y + + +K+++ LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y
Sbjct: 1188 PAKRSYTVHDVMKSDNNLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKY 1247
Query: 1034 RSQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVE---APTRLST 1088
+ Q +I + + V+++ + TC SCK+ + E A T + T
Sbjct: 1248 QINTSSGSNQQNADIFPLESQIPDSVRFENAARLTLTCR--SCKEKSIFEGLVASTHMCT 1305
Query: 1089 -HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
+G+V C N C+ P+T L +I +L + KYYEGWL C+D C + TR
Sbjct: 1306 ANGIV-----CPNQACQ-KPFTVL-TIIAQLESQIRAQTSKYYEGWLVCDDSACGNRTRQ 1358
Query: 1147 ------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC LG + R C Y+ Y+E Q+Y QL +F + D+ KA
Sbjct: 1359 MSVYGHRC-LGPRGRAEGCLGRMTYE----YSEKQMYNQLLYFAGLWDVDKA 1405
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 252/549 (45%), Gaps = 91/549 (16%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE ++++EEV ++ Y + + R +DD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEIEEQDDIFEEVDDEGYKKIIRDRLDQDDFVVDDNGEGYA 65
Query: 116 EDGREIFDD---------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK- 165
+DGRE++++ D E++P + + ++++ + + I K P
Sbjct: 66 DDGREVWNERVADYNSESDDEELPGRNKAAKRKREEEKQRKERINNGISKYFNTGPAASA 125
Query: 166 -KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K K V ++ +ADLL EV+T N N + P + +
Sbjct: 126 PKPKPVVTAEDEAFMADLLGEVDT--------NVVANHV---------PIQNVIKSETRR 168
Query: 225 PIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWD- 283
+++ + P+ +P + K +S ++N A + E DDG M DD D
Sbjct: 169 KVRI---LSPPLASKPRNERISGKDENSEPVSQVNQAPDLEFED-DDGPLPTM--DDGDV 222
Query: 284 ------NSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNV-------ESVSSAVELST 330
S V+ ++ V ++ E +S EE D+ + E+ ++V ++
Sbjct: 223 AMSDPMPSSPISKVVERKSNVNVKKE----ESDEEDNDLMEIAPATGQSEAKMTSVNMAG 278
Query: 331 SPPPQVVEKKEHKC---------------AEWEAIQTEPST-SEPQVHSRT-----ADDS 369
S PP ++K+ + A W ++++ + S P SRT A D
Sbjct: 279 SRPPPKIKKENYTTPASSSPAKAPVDVLNASWNDVRSKLNVLSSPATESRTFGKLRAQDV 338
Query: 370 LPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
+ E RMF+LD E G++ LFGKV K SH S V + NI RK++
Sbjct: 339 I------EEDGSLRMFWLDYTE----VNGSLCLFGKVKNKHTGSHVSAFVKIDNILRKLF 388
Query: 430 LLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSE 485
LPR K T E V + VY E D+I ++ K+ K + +KYAF LP +P +E
Sbjct: 389 FLPREYRYKHGRVTDEEVDMKDVYEEVDEIMSRLKVGMHKIKPCTRKYAFELPDIPKEAE 448
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSR 544
YL++ Y PALP + G+TFSHVFGT +S E +L R + GP WL+ +A+ S
Sbjct: 449 YLKLLYPYDKPALPMETKGETFSHVFGTNTSLFEQFVLWRNVMGPCWLKIEDADFTAVSN 508
Query: 545 ISWCKYEVQ 553
SWCK+E Q
Sbjct: 509 ASWCKFECQ 517
>gi|71001450|ref|XP_755406.1| DNA polymerase alpha catalytic subunit [Aspergillus fumigatus Af293]
gi|66853044|gb|EAL93368.1| DNA polymerase alpha catalytic subunit, putative [Aspergillus
fumigatus Af293]
Length = 1462
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 260/652 (39%), Positives = 386/652 (59%), Gaps = 45/652 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET---GEANKG 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K +K E+ + + G
Sbjct: 776 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSKLQKAEEKNQDGDDDDAG 835
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 836 DKKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVDRTATAENENEE 895
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + + L +D +Q A KLTANSM
Sbjct: 896 KVPEVPSSDQEQGILPKLIATLVGRRREVKKLMKSKSATPEQLALWDTKQLAFKLTANSM 955
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 956 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTIS 1015
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1016 DALKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAINMTEV-DGKFVDKLEVKG 1074
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + ++++IL S D L L +H++++ + + +P+
Sbjct: 1075 LDMKRREYCALSKEVSQKLLNEIL---SGEDQEL--VLNRVHDYLRDLADKMRGYQIPVQ 1129
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT-- 976
I +L+K PEEY +++ +P QVALR K ++ D ISYI+ +G SE ++
Sbjct: 1130 KYVIYTKLSKRPEEYPNKETMPPAQVALR-ELARGKTIRPNDVISYIVT-NGDSETSSLP 1187
Query: 977 --QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+R+Y + + +K+++ LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y
Sbjct: 1188 PAKRSYTVHDVMKSDNNLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKY 1247
Query: 1034 RSQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVE---APTRLST 1088
+ Q +I + + V+++ + TC SCK+ + E A T + T
Sbjct: 1248 QINTSSGSNQQNADIFPLESQIPDSVRFENAARLTLTCR--SCKEKSIFEGLVASTHMCT 1305
Query: 1089 -HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
+G+V C N C+ P+T L +I +L + KYYEGWL C+D C + TR
Sbjct: 1306 ANGIV-----CPNQACQ-KPFTVL-TIIAQLESQIRAQTSKYYEGWLVCDDSACGNRTRQ 1358
Query: 1147 ------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC LG + R C Y+ Y+E Q+Y QL +F + D+ KA
Sbjct: 1359 MSVYGHRC-LGPRGRAEGCLGRMTYE----YSEKQMYNQLLYFAGLWDVDKA 1405
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 251/549 (45%), Gaps = 91/549 (16%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE ++++EEV ++ Y + + R +DD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEIEEQDDIFEEVDDEGYKKIIRDRLDQDDFVVDDNGEGYA 65
Query: 116 EDGREIFDD---------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK- 165
+DGRE++++ D E++P + + ++++ + + I K P
Sbjct: 66 DDGREVWNERVADYNSESDDEELPGRNKAAKRKREEEKQRKERINNGISKYFNTGPAASA 125
Query: 166 -KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K K V ++ +ADLL EV+ N N + P + +
Sbjct: 126 PKPKPVVTAEDEAFMADLLGEVDA--------NVVANHV---------PIQNVIKSETRR 168
Query: 225 PIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWD- 283
+++ + P+ +P + K +S ++N A + E DDG M DD D
Sbjct: 169 KVRI---LSPPLASKPRNERISGKDENSEPVSQVNQAPDLEFED-DDGPLPTM--DDGDV 222
Query: 284 ------NSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNV-------ESVSSAVELST 330
S V+ ++ V ++ E +S EE D+ + E+ ++V ++
Sbjct: 223 AMSDPMPSSPISKVVERKSNVNVKKE----ESDEEDNDLMEIAPATGQSEAKMTSVNMAG 278
Query: 331 SPPPQVVEKKEHKC---------------AEWEAIQTEPST-SEPQVHSRT-----ADDS 369
S PP ++K+ + A W ++++ + S P SRT A D
Sbjct: 279 SRPPPKIKKENYTTPASSSPAKAPVDVLNASWNDVRSKLNVLSSPATESRTFGKLRAQDV 338
Query: 370 LPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
+ E RMF+LD E G++ LFGKV K SH S V + NI RK++
Sbjct: 339 I------EEDGSLRMFWLDYTE----VNGSLCLFGKVKNKHTGSHVSAFVKIDNILRKLF 388
Query: 430 LLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSE 485
LPR K T E V + VY E D+I ++ K+ K + +KYAF LP +P +E
Sbjct: 389 FLPREYRYKHGRVTDEEVDMKDVYEEVDEIMSRLKVGMHKIKPCTRKYAFELPDIPKEAE 448
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSR 544
YL++ Y PALP + G+TFSHVFGT +S E +L R + GP WL+ +A+ S
Sbjct: 449 YLKLLYPYDKPALPMETKGETFSHVFGTNTSLFEQFVLWRNVMGPCWLKIEDADFTAVSN 508
Query: 545 ISWCKYEVQ 553
SWCK+E Q
Sbjct: 509 ASWCKFECQ 517
>gi|389639082|ref|XP_003717174.1| DNA polymerase alpha catalytic subunit [Magnaporthe oryzae 70-15]
gi|351642993|gb|EHA50855.1| DNA polymerase alpha catalytic subunit [Magnaporthe oryzae 70-15]
gi|440475723|gb|ELQ44386.1| DNA polymerase alpha catalytic subunit [Magnaporthe oryzae Y34]
gi|440486034|gb|ELQ65937.1| DNA polymerase alpha catalytic subunit [Magnaporthe oryzae P131]
Length = 1482
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 271/717 (37%), Positives = 399/717 (55%), Gaps = 77/717 (10%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-KEGEETGEANKGK- 619
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK+ K + + EE E G+
Sbjct: 792 LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKRAFKGRQRAAEEDEEGQAGET 851
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ + D + +
Sbjct: 852 GKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVDRQSRIDDEEDAV 911
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
E +P ++D GILP I LV RRQVK+LMK + + + L +DI+Q ALKLTANSMY
Sbjct: 912 PE-VPPAELDQGILPRLIATLVSRRRQVKSLMKDKSATPEQLATWDIKQLALKLTANSMY 970
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLG+ SRF+A+PLA L T KGREIL +TK L EN + +VIYGDTDS+MI+ NV++ +
Sbjct: 971 GCLGYTKSRFYARPLAILTTYKGREILRSTKELAENNSLQVIYGDTDSVMINANVDNVAA 1030
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
F++G K N+ Y+ LE+DID V++ +LL KKKYAA+++ ++ +GK + E+KG+
Sbjct: 1031 AFRVGQDFKRAVNERYRLLEIDIDNVFRRILLQAKKKYAAINMVEV-DGKFVEKMEVKGL 1089
Query: 860 DVVRRDWSQLASEAGKFVISQIL--DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
D+ RR++ L+ E ++ +IL DE + + IHE+++ I + +P
Sbjct: 1090 DMRRREYCALSKEISARILDEILSGDETEVS-------VTRIHEYLRDIAAKMRAQEIPP 1142
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQ 977
I QL K P+EY + ++P VQVALR K +++GD ISYII SE A
Sbjct: 1143 QKYIILTQLGKGPKEYPNGDSMPQVQVALR-EIARGKTIRKGDVISYIITT--GSEPAAT 1199
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
RAY + LK +S L DV++Y+++QI P V RL I GT ++AE LGLD Y S
Sbjct: 1200 RAYTPPDVLKPDSGLSPDVDWYMAKQIFPPVERLCANIIGTSTAQLAENLGLDPRRYAS- 1258
Query: 1037 IKESIQQSEENILGVGEA--------------EEVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
+ G G+A ++V+++ C + E C +CK + E
Sbjct: 1259 -----VSGQNKGFGNGDADAGLEIHPLESQMPDDVRFRNCSRLELRCR--ACKATSVFEG 1311
Query: 1083 ---------PTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGW 1133
+ ++ GV C + +PP + +I ++ + + +YYEGW
Sbjct: 1312 LQAVDGEEKQSHVTPSGVA-----CGSCGATIPPVS----VIAQVERAVRLTTARYYEGW 1362
Query: 1134 LKCEDPGCSDLT-------RRC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYI 1184
L C+D C T RC P GL C +Y+ + E LY QL +F +
Sbjct: 1363 LVCDDTSCGARTTQMSVYGSRCLGPKGLAID-CMGRMRYE----FGERDLYNQLVYFASL 1417
Query: 1185 CDITKALTKS--DTPS----IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
D+ +A D + + + + + +K V+R+L+ V + LF+
Sbjct: 1418 FDVERARAGGVKDEAARERLLALAEQNRVRFGTVKATVDRYLDKCGRQWVAMDNLFT 1474
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 251/559 (44%), Gaps = 76/559 (13%)
Query: 54 KTNKFAAFQKLKDLKGQGVK--HKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDG 110
K NK + +L+ L+ G K YE + ++YEEV E Y + V +R +DD++ DD
Sbjct: 4 KANKRSKLAELRALRQAGKKTFDTYEVEQEGSLYEEVDEDSYKKIVRERLNQDDFVVDDN 63
Query: 111 GDGYVEDGREIFD-------DDIED-VPQKKE--KHDKRKKNKNIQNPNAKG-DIQKLLA 159
G+GY +DGRE +D D ED P +K+ K KR +++ +A DI + +
Sbjct: 64 GEGYADDGREDWDRVPVYDESDSEDGAPARKKTSKAAKRARDEEQAKRDANDRDISEYFS 123
Query: 160 NMPVKKKKKEEVQLNNDD--VLADLLSEVNTTI-APTLKLNTKTNEIVIPKEE---PPAP 213
K + K++ DD LADLL EV++ + P + KT++ + ++ P P
Sbjct: 124 KGASKTQPKQKAIKTEDDDRFLADLLGEVDSNVRVPVYRAPKKTDKTLERRKARALSPGP 183
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ P+ + KI PSP +DE +D M ++ +EP+
Sbjct: 184 DTR-------LPLHKKVKIVDDRPAAPSPHEDE---DDGFMNMD--------DEPLP-LT 224
Query: 274 WEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESV----SSAVELS 329
E + + D S V +A Q + + ++E D+ V +S+V L+
Sbjct: 225 AEDVPMSDPAPSSPAAKVAERKA----QADKKAPEDVDEDEDMMEVSHAGAIKASSVNLA 280
Query: 330 TSPPPQVVEKKEH------------------KCAEWEAIQTEPSTSEPQVHSRTADDSLP 371
S P + + K E + W +I E + Q +RT +
Sbjct: 281 ASRPIKKIIKPEPVPEPIKSSPVKAEVSDDVDASSWNSITQELNVVSSQTETRTVG-KMD 339
Query: 372 LATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLL 431
E R F+ D E G++ LFGKV K+ ++ SC + V NI RK+Y L
Sbjct: 340 FKNAVEADGSLRFFWTDYTE----VNGSLCLFGKVLDKKTKAYVSCFIKVDNILRKLYFL 395
Query: 432 PRSEHLK-----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY 486
PR + EPV + VYSE D I T+ K+ K + +KYAF LP VP +Y
Sbjct: 396 PRENRHRDGEDCPDEPVQMMDVYSEVDDIMTKMKVDMHKIKACTRKYAFELPDVPKEGKY 455
Query: 487 LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-I 545
L++ Y P L SG+TFS VFGT + E +L + I GP WL+ +A+ R
Sbjct: 456 LKLLYPYTKPQLDLARSGETFSRVFGTNTGLFEQFVLLKNIMGPCWLKIGDADFGAIRNA 515
Query: 546 SWCKYEVQCNQMEKIRITN 564
S C+ EV +I + +
Sbjct: 516 SHCRLEVLVEHPNQISVMS 534
>gi|449296808|gb|EMC92827.1| hypothetical protein BAUCODRAFT_96163 [Baudoinia compniacensis UAMH
10762]
Length = 1474
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 273/726 (37%), Positives = 407/726 (56%), Gaps = 73/726 (10%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK---NKK---EGEETGEA 615
+TN+ GN +RTL G R+ERNE++LLH F+ ++ PDK YGK NKK + EA
Sbjct: 774 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKFICPDKVYGKGAANKKLEDTADNGDEA 833
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 675
+ +KK + GGLV EP+KG YDKFI++MDFNSLYPSIIQE+NICFTT+ SD
Sbjct: 834 DAADTKKKDKFKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEFNICFTTV-----DRSD 888
Query: 676 ITTLCEYLPEHQVDT---GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
I + +PE DT GILP I+ LV RR+VK LMK ++S + +D++Q+ALK
Sbjct: 889 IGADEDKVPEVPEDTANKGILPRLIRTLVSRRREVKKLMKDKSISEEQRQTWDVKQQALK 948
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN-YEVIYGDTDSLMIS 791
LTANSMYGCLG+ SRF+A+PLAAL T+KGREIL +TK L E+ + VIYGDTDS+M++
Sbjct: 949 LTANSMYGCLGYTKSRFYARPLAALTTSKGREILQSTKELAESAHALRVIYGDTDSVMVN 1008
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
N ++ K+GN+ K N+ Y+ LE++ID +++ +LL KKKYAA+++ + NG
Sbjct: 1009 TNKDNILEAIKMGNEFKKAVNERYELLEIEIDNIFRRLLLHAKKKYAAINMVE-DNGVWR 1067
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
E+KG+D+ RR++ QL+ + +++ +L + + + +IH+H++ + +
Sbjct: 1068 EKMEVKGLDMRRREYCQLSKDTSTELLNYLLSGE-----EPEKVVSHIHDHLRSLGEKMR 1122
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--ED 969
+ +P I QL KAP+EY + ++P VQVAL+L K+++ D +S+IIC
Sbjct: 1123 SNAIPAYKYTIYTQLGKAPKEYPNANSMPSVQVALKL-MAKGKQVRAKDVMSFIICGSSG 1181
Query: 970 GTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
G++E A + A ++E L +S L DV YYL +QI P V RL PIEGT+ +AECLGL
Sbjct: 1182 GSAENAAKNACTLDEVLAKDSGLVPDVEYYLHKQILPPVERLCVPIEGTNVSLLAECLGL 1241
Query: 1029 DTSLYR----SQIKESIQQSEENILGVGEAEEVKYQFCD-----------KFEFTCMN-- 1071
DTS YR S+ E + E L + ++++ C+ FEF +N
Sbjct: 1242 DTSKYRLSGASKTSEGGRGDEITTLESQVPDHIRFKECEGLGLLCLGCKRHFEFRGLNHQ 1301
Query: 1072 -PSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
PS P + H + C +C+ T L +L + ++ +YY
Sbjct: 1302 QPSTSTPEEETTPMAVVAHTGL----TCPREDCRRTISTLA--LSAQLEAQIRRHTSRYY 1355
Query: 1131 EGWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFF 1181
+L C+D C TR RC P GL C+ +++ Y E LY QL F
Sbjct: 1356 AAYLICDDAACGIRTRQMSVYGHRCLGPKGL-AHGCSGRMRFE----YGEKALYNQLLFL 1410
Query: 1182 HYICDITKALTK-----SDTPSIKFDSET---YMGYCKMKQHVERFLESSAYNIVDLKKL 1233
+ D+ KA+ K + +K +E G C ++ V+ +L+ S + V ++ L
Sbjct: 1411 QGLFDVEKAVGKLGVKGEEDEKVKVMAELNRERFGVC--REVVKAYLDKSGWGWVCMEGL 1468
Query: 1234 FSCEEK 1239
F K
Sbjct: 1469 FGFARK 1474
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 158/604 (26%), Positives = 254/604 (42%), Gaps = 116/604 (19%)
Query: 52 IDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDG 110
+ + + A + L+ G YE +++YE V +++Y + V KR EDD++ DD
Sbjct: 3 VSRAERLAQLRALRKAGKTGF-DAYEVQEADSIYETVDDEQYKQVVRKRLDEDDFVVDDN 61
Query: 111 GDGYVEDGRE-------IFDDDI--EDVPQKKEKHDKRKKNKNI---QNPNAKGDIQKLL 158
G GY +DGRE +++DD ED+P K+ K KRK+ ++ Q N
Sbjct: 62 GAGYADDGREDWQDQRVVYEDDESEEDLP-KQSKAAKRKREDDVERQQKLNQGISKFFSA 120
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTI---APTLKLNTKTNEIVIPKEEPPAPTA 215
K K +DD LA LL EV+ + AP+ K+N+ K +P
Sbjct: 121 NAAASAPKPKPVRTAEDDDFLAGLLGEVDANVPSRAPSYGKPIKSNDRR--KTRVLSPPR 178
Query: 216 KEYLANFSK--PIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+E + ++ + P VE P P+ + ND DG
Sbjct: 179 EESVRSYKRLAPENVEST-------PPHPIAAVVNDND-------------------DGY 212
Query: 274 WEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS-- 331
+ Q DD S QA + I+ ++ E+ D+ V + T+
Sbjct: 213 YVHPQDDDVPMSDPLPSSPAAQAGERKEQTVIKKEAAEDDDDLMEVAEAQGHAAMKTANV 272
Query: 332 ------PPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDH--------- 376
P P++V+ P +S P +R +D + + +
Sbjct: 273 NIKGSRPAPKIVKSS----------YPTPDSSSP---TRAPEDGIDMTAINNVTEKLNIL 319
Query: 377 -------------------ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSC 417
E+ R F+ D E G++ LFGKV + ++ SC
Sbjct: 320 SSSSSEAVSAGKIAAKDALEDDGTLRFFWTDYTE----VNGSLCLFGKVKNRTKGTYVSC 375
Query: 418 CVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKY 473
V V NI RK+Y LPR + T + V ++ VY E D + T++K+ K + +KY
Sbjct: 376 FVKVDNILRKLYFLPREHRQRHGRDTSDEVEMSDVYEEVDGLMTKFKVNMHKIKPCSRKY 435
Query: 474 AFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWL 533
AF LP +P ++YL++ Y PALP ++G+TFSHVFGT ++ E +L + I GP WL
Sbjct: 436 AFELPDIPREADYLKLLYPYDKPALPMGMTGETFSHVFGTNTALFEQFVLWKNIMGPCWL 495
Query: 534 EFPEAE-KFPSRISWCKYEVQCNQMEKIRITNVCGNVLS----------RTLMGGRSERN 582
+ A+ + + SWCK E+Q + I N+ + RT M + +N
Sbjct: 496 KIEGADFQAVNNASWCKLELQVTKPNGITTVGDSDNLEAPPMTLMSLALRTTMNVKENKN 555
Query: 583 EFLL 586
E L+
Sbjct: 556 EILV 559
>gi|345566186|gb|EGX49131.1| hypothetical protein AOL_s00079g3 [Arthrobotrys oligospora ATCC
24927]
Length = 1402
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 268/657 (40%), Positives = 382/657 (58%), Gaps = 57/657 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETGE 614
++TN+ GN L+RTL G R+ERNE++LLH F + Y+ PDK Y K + G + E
Sbjct: 766 QLTNLAGNSLARTLSGTRAERNEYILLHEFTKNKYICPDKSYDKRNSQKATDDDGADEEE 825
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ G+KK + GGLVLEP++G YDKF+++MDFNSLYPSIIQE+NICFTT+ L +
Sbjct: 826 DTRPDGKKKDKFKGGLVLEPERGLYDKFVLVMDFNSLYPSIIQEFNICFTTVERSDLPED 885
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
+ + P Q GILP I LV+ RRQVK LMK + L Q+DI+Q+ALKLT
Sbjct: 886 QVPEI----PSEQAQ-GILPKLISTLVQRRRQVKGLMKDKRATPAQLSQWDIKQQALKLT 940
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLG+ SRF+A+PLA L T +GREIL +TK L E+ VIYGDTDS+MI+ NV
Sbjct: 941 ANSMYGCLGYVRSRFYARPLAMLTTFQGREILRSTKELAESSQLRVIYGDTDSVMINTNV 1000
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
+ Y KIGN K N Y+ LE+DID V++ +LL KKKYAAL+ S ++GK +
Sbjct: 1001 DIYADAIKIGNDFKKAVNDRYRLLEIDIDNVFQRLLLHSKKKYAALNFS--ADGKPVV-- 1056
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E+KG+D+ RR++ Q++ + +++ +IL + D ++ IHE+++ I ++
Sbjct: 1057 EVKGLDMKRREYCQVSKDVSGWILKKILSGEDP-----DAVIEEIHEYLRGIAQNMRENN 1111
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED-GTSE 973
+P + I +L+K PE+Y K +P VQVALR + +K D I+YII D G +
Sbjct: 1112 IPFSRYTIYTKLSKDPEQYPGGKTMPQVQVALR-RRSKGDVVKANDVIAYIITGDGGNTS 1170
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+ +RA+ +ELK++ LK D +YL +QI P V RL PI+GTDA+R+AEC LDT Y
Sbjct: 1171 SPAERAFTPQELKSDPTLKPDPEWYLLKQIFPPVERLCGPIDGTDAIRLAEC--LDTRKY 1228
Query: 1034 RSQIKESIQQSEENI--LGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGV 1091
QI + Q+E I L ++E +++ TC+ CK T LS G+
Sbjct: 1229 --QIASTTAQTESEIHPLESTLSDEERFRNTKPLVLTCL--LCK--------TTLSFGGL 1276
Query: 1092 VFVLDECINPECKVPPYT-----YLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
L+ C K P P LI ++ ++ + +YYE WL CED C + TR
Sbjct: 1277 DSDLEICTPDGLKCPNIGCSNIFTTPVLIAQVESNIRSWTSQYYESWLACEDSSCGNRTR 1336
Query: 1147 -------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS 1194
RC P GL C Y+ Y++ LY QL ++ + D+ +A K+
Sbjct: 1337 QVCVYGKRCIGPQGLGIG-CEGPVAYE----YSDKMLYNQLLYYSTLFDVERAKLKA 1388
Score = 123 bits (308), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 234/558 (41%), Gaps = 104/558 (18%)
Query: 54 KTNKFAAFQKLKDLKG--QGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDG 110
K ++ A ++L+ L+G Q Y+ ++ +++E+ E EY + R +DD++ DD
Sbjct: 4 KASQRAKLEELRKLRGSKQTRLSSYKTQDEQRLFDELDEIEYRKVQRSRLDQDDFVVDDN 63
Query: 111 GDGYVEDGREIFD----------DDIEDVPQKKEKHDKRKK-NKNIQNPNAKGDIQKLLA 159
G+GYVE+G + +D D D P + KRK+ N+ + + G I K
Sbjct: 64 GEGYVENGLDEWDMCGRGDHVSSSDENDNPVRPSTKGKRKRENEIVTRKDQDGSINKYFT 123
Query: 160 NMPVK--KKKKEEVQLNNDDVLADL---LSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPT 214
+M + K K E + + + L++L + E + KL K + P PT
Sbjct: 124 SMAAQGATKHKAESTVEDKEFLSELLGQMDESRDSFRTVKKL----------KAQDPEPT 173
Query: 215 AKEYLANFSKPIKVEKKIEKPIKKE----------PSPLKDEIKSNDSVMEVEMNVAEQS 264
+ A S + + P K SP + + S+D+ +
Sbjct: 174 NRRQRA-LSPSRSTARGLRVPEHKRLTSGQADFVPSSPPRHGVISDDN--------EDDD 224
Query: 265 KEEPVDDGLWEQMQI-----DDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNV 319
+ DD Q +D S+ + P + + E + + + +T
Sbjct: 225 HTKTFDDDTTRQATAFITPHEDISKSRISVKTEPPEPEAHAYNENDDDDELAVRPILTFS 284
Query: 320 ESVSSAVELSTSPPPQVVEK-----------KEHKCAEWEAIQTEPSTSEPQVHSRTADD 368
++ S + L++ P + +K ++ +W A+ + S H+ +D
Sbjct: 285 KTKDSPINLNSIRPDRSAKKDTIPEKLPTPIEDIDANQWRAVDAKLS------HNHVSDQ 338
Query: 369 SLPLATDHENKKV------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQ 422
PL +K V R F++D E G + LFGKVFVK + H+S V +
Sbjct: 339 --PLLGKVASKDVTNDDGSLRFFWMDYTE----IGGCLCLFGKVFVKGTDKHASAFVKIN 392
Query: 423 NIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKI---LDFKSRKIEKKYAFNLPG 479
I RK++ LPR T E V ++ VYSE D++ T+ KI D+K++ + + PG
Sbjct: 393 GIMRKLFFLPRVTKRSTGEEVEMSDVYSEVDELLTRLKISQGSDWKAKPCSRNNPIHSPG 452
Query: 480 VPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
P +P +G++FSHVFGT +S E +L R I GP WL E
Sbjct: 453 ----------------PQVPPGTNGESFSHVFGTGTSIFEQFVLARNIMGPCWLHI-EDP 495
Query: 540 KFPS--RISWCKYEVQCN 555
F SWCK E+Q +
Sbjct: 496 IFTGIENASWCKVELQVS 513
>gi|451996792|gb|EMD89258.1| hypothetical protein COCHEDRAFT_1180672 [Cochliobolus heterostrophus
C5]
Length = 1470
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 284/725 (39%), Positives = 407/725 (56%), Gaps = 57/725 (7%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDKQ+GK
Sbjct: 764 IAAIAIKVQMLPLSKV-LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKQWGK 822
Query: 605 NK--KEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNIC 662
+K E E +KK + GGLV EP+KG YDKFI++MDFNSLYPSIIQEYNIC
Sbjct: 823 SKVKAEEEAAEGEEGADAKKKDKFKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEYNIC 882
Query: 663 FTTIPVRMLQDSDITTLCEYLPE--HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL 720
FTT+ + SDI+ + +PE D GILP I LV RR+VK LMK + + D
Sbjct: 883 FTTV-----ERSDISEDDDKVPEVPSDQDQGILPRLIATLVSRRREVKKLMKAKDATPDQ 937
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEV 780
L +DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL TK + E V
Sbjct: 938 LATWDIKQMALKLTANSMYGCLGYTKSRFYARPLAMLTTYKGREILRKTKDMAEEKALRV 997
Query: 781 IYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL 840
IYGDTDS+MI+ NV++ K+GN+ K E N YK LE+DID V++ +LL KKKYAA+
Sbjct: 998 IYGDTDSVMINTNVDNIQDAIKLGNEFKKEVNDSYKLLEIDIDNVFRRILLHAKKKYAAI 1057
Query: 841 SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ + +GK I E+KG+D+ RR++ L+ E +++ +L + + ++ IH
Sbjct: 1058 NMVPV-DGKYIEKLEVKGLDMRRREYCALSKETSTELLNFLLSGE-----DPEVVVEKIH 1111
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
H++++ + +P I QL K P+EY + ++P VQVALRL K +K D
Sbjct: 1112 NHLRELSKQMREYAIPPRKYTIYTQLGKNPKEYPNGNSMPSVQVALRL-MAKGKHVKAKD 1170
Query: 961 TISYIICED--GTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+S+II D G++E A + AY ++E LK +S LK DV+YYL +QI P V RL PI GT
Sbjct: 1171 VMSFIITGDSSGSAENAAKNAYPVDEVLKPDSGLKPDVDYYLHKQILPPVERLCAPISGT 1230
Query: 1018 DAVRIAECLGLDTSLYR-SQIKESIQQSEE-NILGVGEAEEVKYQFCDKFEFTCMNPSCK 1075
+ +A CLGLDTS YR S + QQ E + L + V++Q C C +C
Sbjct: 1231 NITLLAACLGLDTSKYRVSTVSGGAQQETEIHPLESQIPDSVRFQSCSPLWLRCR--TCT 1288
Query: 1076 QVNTVE-----APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
V + +PT S + +C C + ++ +L + + + YY
Sbjct: 1289 TVFPFQGLSPTSPTSASLQTISHSGIQCPAEGCGMILQNI--SVVAQLESAIRQVVASYY 1346
Query: 1131 EGWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFF 1181
G++ C+DP CS+ TR RC P GL R C Y++ E ++ QL ++
Sbjct: 1347 AGYVLCDDPQCSNRTRSISVYGHRCLGPKGL-ARDCLGKMTYEIK----ERDVWNQLLYY 1401
Query: 1182 HYICDITKALTKSDTP----------SIKFDSETYM-GYCKMKQHVERFLESSAYNIVDL 1230
+ D+ +A K D IK +E + +K V+++LE + V +
Sbjct: 1402 QSLFDVDRA-GKMDGGIKSEDMERREKIKVLAEVNRERFDTLKSVVQKWLEKNGRQWVQM 1460
Query: 1231 KKLFS 1235
LFS
Sbjct: 1461 DSLFS 1465
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 169/601 (28%), Positives = 259/601 (43%), Gaps = 115/601 (19%)
Query: 69 GQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVEDGREIFDDDI- 126
G+ YE +E +Y+EV E+ Y + V R EDD++ D G+GYV+DGRE +DDD
Sbjct: 23 GKTRMSTYEVAEEEQLYDEVDEEGYKKIVRGRLDEDDFVVGDEGEGYVDDGREEWDDDQG 82
Query: 127 -----------EDVPQKKEKHDKRK------KNKNIQNPNAKGDIQKLLANMPVKKKKKE 169
ED K K KRK K K I N +K K A P K K
Sbjct: 83 RYRYAGTESEDEDERPAKGKAAKRKREEDEEKRKKIDNGISKYFSAKNAAMAP---KSKP 139
Query: 170 EVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEE------PPA----PTAKEYL 219
+ D + DLL E++T PTL +T I PP P A +
Sbjct: 140 VATAADKDFMDDLLGEIDTN--PTLTSTIRTRPIKTEARRKTRVLSPPVSESRPAATKRR 197
Query: 220 ANFS-------KPIKVEKKIEK--PIKKEPSPLKDE-IKSNDSVMEVEMNVAEQSKEEPV 269
N S P + + + PI + P+ D ++S+ VE K E
Sbjct: 198 TNDSDRHMPGTPPTEAAEADDDALPIFDDDVPMSDPPLQSSPVAKAVERRTQPGVKIEEE 257
Query: 270 DDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQ----IEAIESQSI------------EEK 313
+D L M+I S+ T + A V + I I+ ++I
Sbjct: 258 EDDL---MEI-----SEPTGQLGAPVASVNMAGRRPIAKIKQENIPTPAGSSPTKPSTAN 309
Query: 314 VDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLA 373
VD ++ V+S + + +SP PQ + +PQ D+L
Sbjct: 310 VDASSWNDVTSNLNVMSSPAPQTAGAGKL---------------QPQ-------DAL--- 344
Query: 374 TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
E+ RMF++D E G++ LFGKV +++ ++ SC + + NI RK+Y LPR
Sbjct: 345 ---EDDGSLRMFWIDYTE----LNGSLCLFGKVKDRKSGNYVSCFLKIDNILRKLYFLPR 397
Query: 434 S----EHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
+ T E + ++ V E D I +++++ K + +KYAF L +P ++YL++
Sbjct: 398 EYRQVRGVTTDEEIGLSDVSDEVDSIMSKHRVNLHKIKPCTRKYAFELADIPKEADYLKL 457
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP-SRISWC 548
Y L +DL+G+TFSHVFGT +S E +L + I GP WL+ + P + SWC
Sbjct: 458 LYGYDKMPLSTDLTGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIDAPDFGPVANASWC 517
Query: 549 KYEVQCNQMEKIRITNVCGNV---------LS-RTLMGGRSERNEFLLLHAFHEKSYVLP 598
K E Q + I + + N+ LS RT + + E L+ A ++ L
Sbjct: 518 KLEAQVVKPNNITVLSASDNLDAPPMTLMSLSLRTTFNAKDNKQEILMASAMIYDNFSLT 577
Query: 599 D 599
D
Sbjct: 578 D 578
>gi|425771140|gb|EKV09593.1| DNA polymerase [Penicillium digitatum Pd1]
gi|425776664|gb|EKV14872.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1460
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/702 (37%), Positives = 401/702 (57%), Gaps = 50/702 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK---QYGKNKKEGEETGEANKG 618
+TN GN +RTL G R+ERNE++LLH FH Y+ PDK + K + + ++ +
Sbjct: 775 LTNTAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSRLQKTEDKMQDGDDDEAV 834
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+ G YD+F+++MDFNSLYPSIIQEYNICFTT+ + +++
Sbjct: 835 DKKKKDKYKGGLVFEPETGLYDRFVLVMDFNSLYPSIIQEYNICFTTVDRTAMAENENEE 894
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + G+LP I LV RR+VK LMK + + L +D +Q ALKLTANSM
Sbjct: 895 NVPDVPSSDQEQGVLPRLIATLVSRRREVKKLMKDKRATPEQLAIWDTKQLALKLTANSM 954
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL NTK L E+ VIYGDTDS+MI+ N+++
Sbjct: 955 YGCLGYTQSRFYARPLAMLTTFKGREILRNTKELAESQQLRVIYGDTDSVMINTNMDNMS 1014
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1015 DAIKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAVNLTEV-DGKYVEKLEVKG 1073
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E ++++IL + + L IHE+++++ + +P+
Sbjct: 1074 LDMKRREYCALSKEVSSKLLNEILSGEDQ-----EVVLNKIHEYLRELAERMKEYTIPVQ 1128
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT-- 976
I +L+K P+EY ++++LP QVALR K ++ D ISYI+ +G SE ++
Sbjct: 1129 KYVIYTKLSKRPQEYPNKESLPPAQVALR-EIARGKTVRPNDVISYIVT-NGDSETSSLP 1186
Query: 977 --QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+R+Y+ ++ LK++S LK DV +Y+ +QI P V RL PI GTDAVR+AECLGLDT Y
Sbjct: 1187 PAKRSYSPQDVLKSDSGLKPDVEFYILKQIFPPVERLCAPIPGTDAVRLAECLGLDTRKY 1246
Query: 1034 RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVE---APTRLST-H 1089
+ S Q + + +F + + CK+ + E A + + T H
Sbjct: 1247 QINTSSSSNQQNAEVTPLESQIPDSVRFANSTRLSLRCRYCKEQSVYEGMVASSHMCTAH 1306
Query: 1090 GVVFVLDECINPEC-KVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-- 1146
G+V C N C K+ P ++ +L + + +YYEGWL C+D C + TR
Sbjct: 1307 GIV-----CPNQSCQKIFPVM---TIVAQLEHQIREQTTRYYEGWLVCDDSSCGNRTRQI 1358
Query: 1147 -----RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSI 1199
RC LG + R C Y+ Y+E ++Y QL +F + D+ KA ++ +
Sbjct: 1359 SVYGHRC-LGPRGRAEGCLGRMSYE----YSEKEIYNQLLYFSGLWDVEKAKVAAEKETG 1413
Query: 1200 -KFDSETYMG------YCKMKQHVERFLESSAYNIVDLKKLF 1234
K DS + + +K V+ +L+ V++ LF
Sbjct: 1414 EKKDSVAALAEFNRTRFGTIKGVVDSYLKKCGRQWVEMDSLF 1455
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 183/708 (25%), Positives = 304/708 (42%), Gaps = 139/708 (19%)
Query: 61 FQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVED 117
+L+ L+ G K YE ++Y+EV + Y + + R +DD++ DD G GY +D
Sbjct: 8 LAELRALRASGKKRISTYEVEDQGDIYDEVDDDGYKKVIRNRLDQDDFVVDDNGAGYADD 67
Query: 118 GREIFD--------DDIEDVPQK---------KEKHDKRKKNKNIQNPNAKGDIQKLLAN 160
GRE+++ D+ +++P + +E+ K K N I KG + A+
Sbjct: 68 GREVWNEQTVEYDSDESDELPTRGKAAKRKREEEQQRKEKMNNGISKYFNKG---QAAAS 124
Query: 161 MPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLA 220
P K K +D +ADLL +V+T + LN ++ E A+ +
Sbjct: 125 AP---KPKLAATAEDDAFMADLLGKVDTNVV----LNHAPTRNIVKSE------ARRKVR 171
Query: 221 NFSKPI------KVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLW 274
S P+ K+ + E + + SP KD+ +D + DDG
Sbjct: 172 VLSPPLSERHREKLHTRDENDLPR--SPKKDQALHSDDL----------------DDGPL 213
Query: 275 EQMQIDDWDNSQQTQDVLPE-------QAKVELQIEAIESQSIEEKVDVTNVESVSSAVE 327
DD S DVLP + + + ++A E + ++ VD+ +V V+
Sbjct: 214 SMPDDDDVPMS----DVLPSSPISKAVERRNTVLVKAEEPE--DDDVDLMDVAEVTGDST 267
Query: 328 L--------STSPPPQVVEKKEHKCAEWEAIQTEP---STSEPQVHSRTADDSLPLATDH 376
L + PPP++ + A +++ P S V S+ S P
Sbjct: 268 LKSKTINMTGSRPPPKIKHDTDPTPASSSPVKSMPEVMDASWNDVRSKLNVLSSPAPETR 327
Query: 377 -----------ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNID 425
E+ R+F+LD E G++ LFGKV K+N S +S V V NI
Sbjct: 328 SFGKLRAQDVVEDDGSLRIFWLDYTE----VNGSLCLFGKVKNKQNGSFTSAFVKVDNIL 383
Query: 426 RKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
RK+Y LPR + T+E V + VYSE D++ ++ K+ K + E+KYAF +PGVP
Sbjct: 384 RKLYFLPREYRHRHGRPTEEEVDMQDVYSEVDEMMSKLKVGMHKMKPCERKYAFEIPGVP 443
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-K 540
+EYL++ Y ALP + G+TFS+VFGT +S E +L + I GP WL +A+
Sbjct: 444 KEAEYLKLLYPYDKAALPMETKGETFSNVFGTNTSLFEQFVLWKNIMGPCWLRVDQADFA 503
Query: 541 FPSRISWCKYEVQCNQMEKIRITNVCGNVLS----------RTLMGGRSERNEFLLLHA- 589
+ SWCK+E + + I + N+ + RT + + + E L+ A
Sbjct: 504 AVTNASWCKFECRAAKPALISLVPDSENLDAPPLTLMSLSFRTQLNAKENKQEILIASAR 563
Query: 590 -FHEKSYV-------LPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGF-YD 640
+ + S LP K + + G + + R + G ++LE + F
Sbjct: 564 VYEDVSLTDNTPPEKLPCKTFTVMRPAGASYPMHFEAEARSQ---RGTVILEKSEQFLLS 620
Query: 641 KFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQV 688
KF+ + F + P ++ + LQD D+ L + E +
Sbjct: 621 KFLAM--FEKMDPDVVMGHQ----------LQDVDLGILLSRMREKKT 656
>gi|119481041|ref|XP_001260549.1| DNA polymerase alpha catalytic subunit, putative [Neosartorya
fischeri NRRL 181]
gi|119408703|gb|EAW18652.1| DNA polymerase alpha catalytic subunit, putative [Neosartorya
fischeri NRRL 181]
Length = 1462
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 258/652 (39%), Positives = 387/652 (59%), Gaps = 45/652 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK---EGEETGEANKG 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K +K + ++ + + G
Sbjct: 776 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSKLQKVEEKNQDGDDDDAG 835
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 836 DKKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVDRTATAENENEE 895
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + + L +D +Q A KLTANSM
Sbjct: 896 KVPEVPSSDQEQGILPKLIATLVGRRREVKKLMKSKSATPEQLALWDTKQLAFKLTANSM 955
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 956 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTIS 1015
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1016 DALKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAVNMTEV-DGKFVDKLEVKG 1074
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L S D L L +H++++ + + +P+
Sbjct: 1075 LDMKRREYCALSKEVSQKLLNEVL---SGEDQEL--VLNRVHDYLRDLADKMRGYQIPVQ 1129
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT-- 976
I +L+K PEEY +++ +P QVALR K ++ D ISYI+ +G SE ++
Sbjct: 1130 KYVIYTKLSKRPEEYPNKETMPPAQVALR-ELARGKTIRPNDVISYIVT-NGDSETSSLP 1187
Query: 977 --QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+R+Y + + +K+++ LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y
Sbjct: 1188 PAKRSYTVHDVMKSDNNLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKY 1247
Query: 1034 RSQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVE---APTRLST 1088
+ Q +I + + V+++ + TC SCK+ + E A T + T
Sbjct: 1248 QINTSSGSNQQNADIFPLESQIPDSVRFENAARLTLTCR--SCKEKSIFEGLVASTHMCT 1305
Query: 1089 -HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
+G+V C N C+ P+T L +I +L + KYYEGWL C+D C + TR
Sbjct: 1306 ANGIV-----CPNQACQ-KPFTVL-TIIAQLESQIRAQTSKYYEGWLVCDDSACGNRTRQ 1358
Query: 1147 ------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC LG + R C Y+ Y+E Q+Y QL +F + D+ KA
Sbjct: 1359 MSVYGHRC-LGPRGRAEGCLGRMTYE----YSEKQMYNQLLYFAGLWDVDKA 1405
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 150/551 (27%), Positives = 253/551 (45%), Gaps = 81/551 (14%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE +++YEEV ++ Y + + R +DD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEIEEQDDIYEEVDDEGYKKIIRDRLDQDDFVVDDNGEGYA 65
Query: 116 EDGREIFDDDIED---------VPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK- 165
+DGRE++++ + D +P + + ++++ + + I K P
Sbjct: 66 DDGREVWNERVADYNSESDDDGLPGRSKAAKRKREEEKQRKEKINNGISKYFNTGPAASA 125
Query: 166 -KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K K V ++ +ADLL EV+T + IP + + + S
Sbjct: 126 PKPKPVVTAEDEAFMADLLGEVDTNVVANH----------IPTQNVIKSETRRKVRILSP 175
Query: 225 PIKVEKKIEKPIKKEPS--PLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDW 282
P+ + + E+ +K+ + PL ++ D +E E + +DDG + + D
Sbjct: 176 PLASKPRNERISRKDENSEPLSPVNQAPD--LEFE---DDDGPLPTMDDG---DVAMSDP 227
Query: 283 DNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNV-------ESVSSAVELSTSPPPQ 335
S V+ ++ ++ E +S EE D+ + E+ ++V ++ S PP
Sbjct: 228 MPSSPISKVVERKSNANVKKE----ESDEEDNDLMEIAPATGQSEAKMTSVNMAGSRPPP 283
Query: 336 VVEKKEHKC---------------AEWEAIQTEPST-SEPQVHSRT-----ADDSLPLAT 374
++K+ + A W ++++ + S P SRT A D +
Sbjct: 284 KIKKENYATPANSSPAKAPVDVLNASWNDVRSKLNVLSSPATESRTFGKLRAQDVI---- 339
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
E RMF+LD E G++ LFGKV K SH S V + NI RK++ LPR
Sbjct: 340 --EEDGSLRMFWLDYTE----VNGSLCLFGKVKNKHTGSHVSAFVKIDNILRKLFFLPRE 393
Query: 435 EHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
K T E V + VY E D++ ++ K+ K + +KYAF LP +P +EYL++
Sbjct: 394 YRYKHGRVTDEEVDMKDVYEEVDEMMSRLKVGMHKIKPCTRKYAFELPDIPKEAEYLKLL 453
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCK 549
Y P LP + G+TFSHVFGT +S E +L + I GP WL+ +A+ + SWCK
Sbjct: 454 YPYDKPTLPMETKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIEDADFTAVNNASWCK 513
Query: 550 YEVQCNQMEKI 560
+E Q + I
Sbjct: 514 FECQVARPASI 524
>gi|302652611|ref|XP_003018152.1| hypothetical protein TRV_07848 [Trichophyton verrucosum HKI 0517]
gi|291181764|gb|EFE37507.1| hypothetical protein TRV_07848 [Trichophyton verrucosum HKI 0517]
Length = 1467
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 260/652 (39%), Positives = 377/652 (57%), Gaps = 47/652 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-GEANKGKG 620
+TN+ GN SRTL G R+ERNE++LLH F+ Y+ PDK K + + EE GE +
Sbjct: 783 LTNLAGNSWSRTLSGTRAERNEYILLHEFYRGKYICPDKYGHKTQIKIEENEGEEDGADK 842
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK +++MDFNSLYPSIIQE+NICFTT+ ++D
Sbjct: 843 KKKEKYKGGLVFEPEKGLYDKHVLVMDFNSLYPSIIQEFNICFTTVDRHTSSENDREESV 902
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ GILP I LV RR+VK LMK + + + L +D +Q ALKLTANSMYG
Sbjct: 903 PEVPDSDQPLGILPRLIATLVSRRREVKKLMKDKSATPEELALWDTKQLALKLTANSMYG 962
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ N ++
Sbjct: 963 CLGYTQSRFYARPLAMLTTFKGREILRNTKELAETNQLRVIYGDTDSVMINTNTDNVQEA 1022
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN+ K N+ Y+ LE+DID V+K +LL KKKYAA+++S++ +GK + E+KG+D
Sbjct: 1023 LKVGNEFKRLVNQRYRLLEIDIDNVFKRLLLHAKKKYAAINLSEV-DGKYVEHLEVKGLD 1081
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVPL 917
+ RR++ L+ E ++ +IL S DD L IH++++++ + +P+
Sbjct: 1082 MKRREFCALSKEVSTKLLHEIL--------SGDDVEVVLNKIHDYLRELAQKMHEYAIPV 1133
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT- 976
I +L+K P+EY +++ +P QVALR K ++ D ISYI+ G SE ++
Sbjct: 1134 QKYVIYTKLSKKPDEYPNKETMPPAQVALR-ELARGKSVRPNDVISYIVTL-GDSETSSL 1191
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+R+Y +++ +K +S LK DV +YL +QI P + RL PI GTDA R+AECLGLD
Sbjct: 1192 QPAKRSYTLQDVIKPDSGLKPDVEFYLLKQIFPPIERLCAPIPGTDAARLAECLGLDVRK 1251
Query: 1033 YR--SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHG 1090
Y+ S Q+ E L + ++++ + C C++ +T E G
Sbjct: 1252 YQISSNATHGQQEIELCALESQIPDSIRFEKAARLNLHCR--FCRKKSTFE--------G 1301
Query: 1091 VVFVLDEC-----INPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+V D C + PE + ++ +L + +YYEGWL C+D C + T
Sbjct: 1302 LVASRDMCSPNGLLCPEPSCGKAFTVISIVAQLESQIRAQTAQYYEGWLVCDDSACGNRT 1361
Query: 1146 R-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
R RC LG + R C ++H Y+E QLY QL +F + D+ KA
Sbjct: 1362 RQMSVYGQRC-LGPRGR-AEGCLG-RMHYEYSEKQLYNQLLYFAGLWDVEKA 1410
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 156/546 (28%), Positives = 248/546 (45%), Gaps = 62/546 (11%)
Query: 61 FQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVED 117
++LK L+ G K YE DE++YE+V E+ Y + V KR DD++ DD G+GY +D
Sbjct: 8 LEELKALRASGRKRLLTYEVQEDEDIYEQVDEEGYKKVVRKRLDRDDFVVDDNGEGYADD 67
Query: 118 GREIFDD--------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKE 169
GRE +DD D + +P + + ++++ N + I K K+ K
Sbjct: 68 GREEWDDTRLAASDSDSDGLPVRGKAAKRKREEDNKKKEEINNGINKYFTATLTKQTSKP 127
Query: 170 EVQLNNDD--VLADLLSEVNTTIAP-------TLKLNTKTNEIVIPKEEPPAPTAKEYLA 220
+ DD LAD+L +V T IA ++K T+ ++ P P K+
Sbjct: 128 KPVATADDEAFLADILGDVETNIASLKVPVKRSVKSETRRKVRIVSPPAQPKPRVKK--- 184
Query: 221 NFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQID 280
+++++ + P K+ S E + +D ++ + A S++ + ++
Sbjct: 185 -----TEIDQENDNPHPKDSSAADAEFE-DDVFLDGGDDDAIMSEQPLPSSPVASAVERK 238
Query: 281 DWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKK 340
S+ Q V+ ++ + + + + TN SV+ + PPP+V K
Sbjct: 239 TAGTSRSKQVVIKKEEDDDDGDDDMLDVAEAVADHSTNTPSVNM---VGKRPPPKV---K 292
Query: 341 EHKCAEWEAIQTEPSTSE---PQ-----------VHSRTAD----DSLPLATDHENKKVF 382
+ C + A +T+E P ++S D L E
Sbjct: 293 KEVCDDPMASSPARATTEMINPSSWNDVTNKLNVLNSSVTDIQRFGKLTCQEAVEEDGSL 352
Query: 383 RMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS----EHLK 438
R F+LD E G++ LFGKV K NNS+ S V V NI RK+Y LPR
Sbjct: 353 RFFWLDYTE----INGSLCLFGKVKNKTNNSYVSAFVKVDNILRKLYFLPREYKYVRGQP 408
Query: 439 TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPAL 498
T E V + VY E D I ++ K+ K + +KYAF LP +P +EYL++ Y PAL
Sbjct: 409 TSEEVDMEDVYGEVDNIMSRSKVEMHKIKPCTRKYAFELPDIPKEAEYLKLMYPYTKPAL 468
Query: 499 PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQM 557
P +L G+TFSHVFGT ++ E +L + I GP WL+ +A+ + SWCK E Q
Sbjct: 469 PIELKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFTAVNGASWCKLECQVTNP 528
Query: 558 EKIRIT 563
I +
Sbjct: 529 ADISLV 534
>gi|315041206|ref|XP_003169980.1| DNA polymerase alpha catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311345942|gb|EFR05145.1| DNA polymerase alpha catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1465
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 258/652 (39%), Positives = 377/652 (57%), Gaps = 47/652 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-GEANKGKG 620
+TN+ GN SRTL G R+ERNE++LLH F+ Y+ PDK K + + EE G+ +
Sbjct: 781 LTNLAGNSWSRTLSGTRAERNEYILLHEFYRGKYICPDKYGHKTQIKVEENEGDEDGADK 840
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK +++MDFNSLYPSIIQE+NICFTT+ ++D
Sbjct: 841 KKKEKYKGGLVFEPEKGLYDKHVLVMDFNSLYPSIIQEFNICFTTVDRHASSENDREESV 900
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ GILP I LV RR+VK LMK + + + L +D +Q ALKLTANSMYG
Sbjct: 901 PEVPDSDQPLGILPRLIATLVSRRREVKKLMKDKSATPEELALWDTKQLALKLTANSMYG 960
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ N ++
Sbjct: 961 CLGYTQSRFYARPLAMLTTFKGREILRNTKELAETNQLRVIYGDTDSVMINTNTDNVQEA 1020
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN+ K N+ Y+ LE+DID V+K +LL KKKYAA+++S++ +GK + E+KG+D
Sbjct: 1021 LKVGNEFKRLVNQRYRLLEIDIDNVFKRLLLHAKKKYAAINLSEV-DGKYVEHLEVKGLD 1079
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVPL 917
+ RR++ L+ E ++ +IL S DD L IH++++++ + +P+
Sbjct: 1080 MKRREFCALSKEVSTKLLHEIL--------SGDDVEVVLNKIHDYLRELTQKMHEYTIPV 1131
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT- 976
I +L+K P+EY +++ +P QVALR K ++ D ISYI+ G SE ++
Sbjct: 1132 QKYVIYTKLSKRPDEYPNKETMPPAQVALR-ELARGKSVRPNDVISYIVTL-GDSETSSL 1189
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+R+Y +++ +K +S LK DV +YL +QI P + RL PI GTDA R+AECLGLD
Sbjct: 1190 QPAKRSYTLQDVIKPDSGLKPDVEFYLLKQIFPPIERLCAPIPGTDAARLAECLGLDVRK 1249
Query: 1033 YR--SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHG 1090
Y+ S Q++E L + ++++ + C C++ T E G
Sbjct: 1250 YQISSNANHGQQETELCALESQVPDSIRFEKAARLNLQCR--FCRKTATFE--------G 1299
Query: 1091 VVFVLDEC-----INPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+V + C I P+ + ++ +L + +YYEGWL C+D C + T
Sbjct: 1300 LVASREMCSPNGLICPDASCGKAFTVISIVAQLESQIRAQTAQYYEGWLVCDDSACGNRT 1359
Query: 1146 R-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
R RC LG + R C ++H Y+E QLY QL +F + D+ KA
Sbjct: 1360 RQISVYGQRC-LGPRGR-AEGCLG-RMHYEYSEKQLYNQLLYFAGLWDVEKA 1408
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 250/562 (44%), Gaps = 87/562 (15%)
Query: 54 KTNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDG 110
+ NK A +LK L+ G K YE DE++YE+V E+ Y + V KR DD++ DD
Sbjct: 4 RANKLA---ELKALRASGKKRLATYEVEEDEDIYEQVDEEGYKKVVRKRLDRDDFVVDDN 60
Query: 111 GDGYVEDGREIFDD--------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMP 162
G+GY +DGRE +DD D +D+P + + ++++ ++ + + I K
Sbjct: 61 GEGYADDGREEWDDTRPAASDSDSDDLPVRGKAAKRKREEESKRKEKIENGINKYFTATL 120
Query: 163 VKKKKKEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLA 220
K+ K + DD LAD+L +V T IA + AP K +
Sbjct: 121 TKQTSKPKPVATADDEAFLADILGDVETNIATS-----------------NAPVKKSIKS 163
Query: 221 NFSKPIKVEKKIEKPIKKEPSPLKDEIK-SNDS-------VMEVEMNVAEQS-------- 264
+ +++ + P++ +P K E NDS V +VE
Sbjct: 164 ETRRKVRI---VSPPVQPKPRAKKTETNPGNDSPHAKDKLVPDVEFEDGGFLDGGDDDAI 220
Query: 265 -KEEPVDDG-LWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESV 322
E P+ + M+ S+ QDV+ ++ E +++ + TN SV
Sbjct: 221 MSEPPLPSSPVASAMERKTGSTSRPKQDVIKKEEDDEDDDMMDVVEAVADHS--TNTPSV 278
Query: 323 SSAVELSTSPPPQVVEKKEH-----------------KCAEWEAIQTEPSTSEPQVHSRT 365
+ + PPP++ KKE + W + ++ + V
Sbjct: 279 NM---VGKRPPPKI--KKEIYDDPMASSPARATTEMINPSSWNDVTSKLNVLNSSVTDMQ 333
Query: 366 ADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNID 425
L E R F+LD E G++ LFGKV K NNS+ S V V NI
Sbjct: 334 RFGKLTCQEAVEEDGSLRFFWLDYTE----INGSLCLFGKVKNKTNNSYVSAFVKVDNIL 389
Query: 426 RKIYLLPR----SEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
RK+Y LPR + T E V + VY E D + ++ K+ K + +KYAF LPG+P
Sbjct: 390 RKLYFLPREYKYTRGQTTSEEVDMEDVYGEVDTLMSRSKVEMHKIKPCTRKYAFELPGIP 449
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-K 540
+EYL++ Y PALP DL G+TFSHVFGT ++ E +L + I GP WL+ +A+
Sbjct: 450 KEAEYLKLMYPYTKPALPMDLKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFT 509
Query: 541 FPSRISWCKYEVQCNQMEKIRI 562
+ SWCK E Q +I +
Sbjct: 510 AVNGASWCKLECQVTNPAEISL 531
>gi|115384642|ref|XP_001208868.1| hypothetical protein ATEG_01503 [Aspergillus terreus NIH2624]
gi|114196560|gb|EAU38260.1| hypothetical protein ATEG_01503 [Aspergillus terreus NIH2624]
Length = 1460
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 270/706 (38%), Positives = 408/706 (57%), Gaps = 57/706 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANK---G 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK + +K E+ + ++
Sbjct: 774 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSRLQKAEEKIQDGDEEDGV 833
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 834 DKKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVERTATAENENEE 893
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 894 KVPEVPTSDQEQGILPRLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 953
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK LVE+ VIYGDTDS+MI+ N++
Sbjct: 954 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELVESKQLRVIYGDTDSVMINTNMDTIS 1013
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G+++K N+ Y+ LE+DID +++ +LL KKKYAA++I+++ +GK + E+KG
Sbjct: 1014 DALKVGDELKKVVNERYRLLEIDIDNIFRRLLLHAKKKYAAINITEV-DGKYVDKLEVKG 1072
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ EA + +++++L S D L L +HE+++ + + VP+
Sbjct: 1073 LDMKRREYCALSKEASQRLLNEVL---SGEDQEL--VLDRVHEYLRDLAHKMREYTVPVQ 1127
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT-- 976
I +L+K PEEY +++++P VQVALR K ++ D ISYI+ +G SE ++
Sbjct: 1128 KYVIYTKLSKRPEEYPNKESMPPVQVALR-ELARGKSVRPNDVISYIVT-NGDSETSSLP 1185
Query: 977 --QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+R+Y +++ +K+++ LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y
Sbjct: 1186 PAKRSYTLQDVMKSDNGLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKY 1245
Query: 1034 RSQIKESIQQSEENI----LGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS-- 1087
QI S +++N L + V++Q + TC CK+ + E S
Sbjct: 1246 --QINNSSGGNQQNTDIFPLESQIPDSVRFQNAARLTLTCR--FCKEKSVFEGLVTSSHM 1301
Query: 1088 --THGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
HG+V C N C+ ++ L ++ +L + KYYEGWL C+D C + T
Sbjct: 1302 CNPHGIV-----CPNESCQ-KQFSVL-TVVAQLESQIRAQTSKYYEGWLVCDDSACGNRT 1354
Query: 1146 R-------RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK--ALTKS 1194
R RC LG + C Y+ Y+E Q+Y QL +F + D+ K A +
Sbjct: 1355 RQTSVYGHRC-LGPRGHAEGCLGRMTYE----YSEKQMYNQLLYFAGLWDVDKARAAAQK 1409
Query: 1195 DTPSIKFDSETYMG------YCKMKQHVERFLESSAYNIVDLKKLF 1234
+ K DS + + +K V+ +L+ V++ LF
Sbjct: 1410 EASGEKKDSVAALAEFNRVRFGTVKGVVDGYLKKCGRQWVEMDNLF 1455
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 250/552 (45%), Gaps = 93/552 (16%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE ++YEEV ++ Y + + R EDD++ DD G GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEIEEQGDIYEEVDDEGYKKVIRDRLDEDDFVVDDNGAGYA 65
Query: 116 EDGREIFD-------DDIED--VPQKKEKHDKRKKNKNIQNPNAKGDIQKLL--ANMPVK 164
+DGRE+++ DD ED +P + + ++++ + + I K N
Sbjct: 66 DDGREVWNEPTAGYYDDSEDDELPARGKAAKRKREEEKQRQEKINNGISKYFNKGNATTT 125
Query: 165 KKKKEEVQLNNDDVLADLLSEVNTTIA----PT---LKLNTK----------TNEIVIPK 207
K K V +D +ADLL EV+T + PT +K + ++ +PK
Sbjct: 126 SKPKPVVTAEDDAFMADLLGEVDTNVVSNHVPTQNVIKSEARRKVRILSPPLSDRTRLPK 185
Query: 208 EE----------PPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVE 257
+E PPA + L N P+ + P+ D + S+ VE
Sbjct: 186 KERKDENSDPVSPPAQEPELNLDNDDGPLST--------ADDDIPMSDPMPSSPLSKAVE 237
Query: 258 MNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVT 317
A K+E DD + M+I + +Q E K
Sbjct: 238 RKTATPVKKEESDDEENDLMEIAEATGTQ------------------------EAKAASV 273
Query: 318 NVESVSSAVEL-------STSPPPQVVEKKEHKCAEWEAIQTEPST-SEPQVHSRTADDS 369
N+ +L ++S P + E+ A W ++++ + S P SRT
Sbjct: 274 NMAGTRPPPKLKRALPTPASSSPAKAAPDLEN--ASWNDVRSKLNVLSSPATESRTFG-K 330
Query: 370 LPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
L E RMF++D F ++ G++ LFGKV K S +S V V NI RK+Y
Sbjct: 331 LRAQDVVEEDGSLRMFWID-FTEVN---GSLCLFGKVKNKHTGSFASAFVKVDNILRKLY 386
Query: 430 LLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSE 485
LPR +K T E V + VYSE D++ ++ ++ K + +KYAF +PG+P +E
Sbjct: 387 FLPRENRVKHGRETDEEVDMEDVYSEVDEMMSRLRVGMHKIKPCTRKYAFEIPGIPREAE 446
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSR 544
YL++ Y PALP D+ G+TFSHVFGT +S E +L + I GP WL+ EA+ +
Sbjct: 447 YLKLLYPYDKPALPMDVKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIEEADFSAVNN 506
Query: 545 ISWCKYEVQCNQ 556
SWCK+E Q ++
Sbjct: 507 ASWCKFECQVSK 518
>gi|312068656|ref|XP_003137316.1| hypothetical protein LOAG_01730 [Loa loa]
Length = 1409
Score = 425 bits (1092), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/628 (40%), Positives = 362/628 (57%), Gaps = 76/628 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG------ 613
I+IT + G VLSRT++GGR+ERNE+LLLHAF++ YV P+K Y + K+ +++G
Sbjct: 780 IQITKIVGGVLSRTMLGGRAERNEYLLLHAFNKAGYVPPNK-YQPDSKKRKQSGLKDTKS 838
Query: 614 ------EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ K + +K Y GGLVL+PK G YD F++L+DFNSLYPSIIQEYNICFTT+
Sbjct: 839 VDDDLEDYKKVQHNRKGQYVGGLVLDPKIGLYDTFVLLLDFNSLYPSIIQEYNICFTTVD 898
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
+ D + E LP V+ GILP EI+ LVE RR VK +MK L+ QYDIR
Sbjct: 899 ---MSKKDKNEMPE-LPS-DVNEGILPREIRSLVERRRDVKRMMKSEKLTQQQRQQYDIR 953
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGRE------------------ILLNT 769
Q LKLTANSMYGCLGF SRF+A+PLAAL+TA+GRE IL++T
Sbjct: 954 QMGLKLTANSMYGCLGFQQSRFYAKPLAALITAQGRECFSRYGGSTRNDPIIVLQILMHT 1013
Query: 770 KSLVENLNYEVIYGDTDSLMISCNVND---YDSVFKIGNQIKSECNKLYKQLELDIDGVY 826
K L+E Y VIYGDTDS+MI+ ++ V K+GN++
Sbjct: 1014 KDLIEKNGYSVIYGDTDSVMINTGFSERSELQRVKKLGNEV------------------- 1054
Query: 827 KYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS 886
+++ +K+KYA L++ N + +EIKG+D+VRRD+S + + G ++ IL QS
Sbjct: 1055 --IVVTEKEKYAGLAVDL--NDERKTKREIKGLDIVRRDYSFIVKQIGNEILDIILSVQS 1110
Query: 887 YTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVAL 946
+ D+ + IH ++K+ D+ + ++L +I KQLT+ P EY + PH VA
Sbjct: 1111 Q---NRDEIIGQIHSRLRKLGKDIAQELLEISLFQIFKQLTRNPHEYANISVQPHAAVAQ 1167
Query: 947 RLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPV 1006
RLN T K QGDTI YIICEDG+ + ATQRAY++ E+ + L+ID YYL QQI PV
Sbjct: 1168 RLNATGKFKFHQGDTIGYIICEDGSGKPATQRAYHLTEVLESKDLRIDFQYYLVQQILPV 1227
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKY---QFCD 1063
V+RL PIE + +A+ LGLD+ YR K +I EEN+ +++ + ++C+
Sbjct: 1228 VSRLCVPIEECNEAWVAQALGLDSVAYR---KHAIY--EENMDREEQSQSFPHYSLEYCE 1282
Query: 1064 KFEFTCMNPSCKQVNTVEAPTRLSTHG-VVFVLDECINPECKVPPYTYLPHLINKLSQDM 1122
F+F C N CK V +G L++C C+ + +L N+L +
Sbjct: 1283 SFKFVCPNDGCKHEFLVRECMVQDDNGEQKLWLNDC--SVCRNSLLCFGAYLYNQLQLTL 1340
Query: 1123 NKYIVKYYEGWLKCEDPGCSDLTRRCPL 1150
+K I YY+ C+D GC+ TR L
Sbjct: 1341 DKVISDYYKVSYVCDDIGCAYRTRTLVL 1368
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 244/549 (44%), Gaps = 87/549 (15%)
Query: 53 DKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLK----RQEDDWIDD 108
D+ +K A +++K + G H+ + N+ + V E+ E +K RQ DD++ D
Sbjct: 33 DQESKSLALEEMKRARDAGGVHRVDIA---NLVKPVYEEVDEEEYMKIVQERQRDDFVVD 89
Query: 109 DG---------GDGYVEDGREIFDDDIEDVPQKKEKHD--KRKKNKNIQNPNA-----KG 152
DG G GYV+ G + FD++ + ++K D K K ++ NA
Sbjct: 90 DGPYLTETLFDGSGYVDYGIDFFDEEQCNKAKRKAIDDFFHTSKTKKVKEENALTVTDDP 149
Query: 153 DIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPA 212
D++ LL + E D D LS + + +K KE
Sbjct: 150 DVEALLNECDLSSFLNENAVEKMDGSKTDSLSLIRNQFVKESETASKL------KESDEV 203
Query: 213 PTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDG 272
+E+L + P PL I + +S +E +V++QS E+ G
Sbjct: 204 NECREHLNATASP----------------PLPAIIGAKNST-NLE-SVSQQSIEKKKKSG 245
Query: 273 LWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVEL---- 328
+WE T D + L + + S E V +V ++ SA E
Sbjct: 246 IWEG-----------TLDAV-------LVVFSTTS-GFESPHSVRSVNALKSAHEPVYAD 286
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEPS----------TSEPQVHSRTADDSLPLATDHEN 378
S V+ K KC E +Q+E +P + A + T+ +
Sbjct: 287 SFMDVHSVMNKYSDKCIVEEVVQSETCFIWADRKKAVDEQPMKDNIAATFGSFMRTNSKG 346
Query: 379 KKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK 438
+ R ++LDAFED K PGTVYLFG++ + SCCVIV+NI R+++ LPR + L
Sbjct: 347 ESTLRFYWLDAFEDPIKIPGTVYLFGRLI--NDGLSESCCVIVKNIWRQVFFLPREKLLI 404
Query: 439 TK---EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKC 495
+ + V + QV E +I + K R EKK+A+N VP ++ LEV YS
Sbjct: 405 NEVQTDEVDLTQVNEEVQKILRSMGVKVVKCRPCEKKFAYNDGVVPRSAQVLEVHYSFND 464
Query: 496 PALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYE--VQ 553
P L DLSG+TFSHVF T ++ +E LL+E +KGPSW+E + ++S+ K+E V
Sbjct: 465 PRLSVDLSGETFSHVFNTTANAMERLLIETGMKGPSWVEISGCDVSSLQVSYVKHEFVVD 524
Query: 554 CNQMEKIRI 562
QM+ I I
Sbjct: 525 MKQMKSISI 533
>gi|430811166|emb|CCJ31341.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1367
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 281/700 (40%), Positives = 396/700 (56%), Gaps = 75/700 (10%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK----KEGEETGEAN 616
++TN+ GN +RTL G R+ERNE++LLH FH + Y+ PDK K+K E +E +
Sbjct: 716 QLTNLAGNNWARTLTGTRAERNEYILLHEFHREKYICPDKTLTKSKIIDINEEDEIDDTV 775
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
K R K Y GGLV EP KG YDK+I++MDFNSLYPSIIQEYNICFTTI + D
Sbjct: 776 PLKKRDK--YKGGLVFEPIKGLYDKYILIMDFNSLYPSIIQEYNICFTTID---RHECDN 830
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
LP+ Q+ GILP I+ V R+Q+K LMK N SS MQ+DI+Q+ALKLTAN
Sbjct: 831 DEKIPELPDEQIPQGILPKLIETFVNRRKQIKNLMKDKNASSIQRMQWDIKQQALKLTAN 890
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
SMYGCLG+ SRF+A+PLA L+T KGREIL NTK L E+LN +VIYGDTDS+MI+ NV
Sbjct: 891 SMYGCLGYTKSRFYARPLAVLITYKGREILRNTKELAESLNLQVIYGDTDSVMINTNVEI 950
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
++ KIGN+ K N+ YK LE+DID VY+ MLL KKKYAAL + + +NGKM +I
Sbjct: 951 FEEAIKIGNEFKKHVNERYKLLEIDIDNVYQRMLLHAKKKYAALHLIE-TNGKM--EPKI 1007
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG-FV 915
+ R +V+ QIL + T++ ++ IH++++ + G F
Sbjct: 1008 DQKKLHR-----------GYVLDQILSGKQ-TEFV----VEKIHDYLRDFANKMHIGDFQ 1051
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-EDGTSEA 974
P + I +L K PEEY + K++PHVQVAL+ +K D I YII + +
Sbjct: 1052 PAKFI-IYNKLGKNPEEYPNGKSMPHVQVALK-KKAKGDSVKVNDVIGYIITGNENDNRH 1109
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+RA +E+ +S +KID NYYL+ QI P + RL PIEGTD R+AECLGLD Y
Sbjct: 1110 VAERACLPQEVIKSSNMKIDYNYYLANQILPPIERLCGPIEGTDRTRLAECLGLDIKKY- 1168
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV 1092
QI E I SE I +E +++ F TC SC + ++ G+
Sbjct: 1169 -QINE-INNSEYKISTYESNLTDEERFKGVASFIITC--NSCHE--------KIDFKGLA 1216
Query: 1093 ----FVLDECINPEC--KVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
FV E I +C K+P YT + +L + + YY WL C DP C++ TR
Sbjct: 1217 KSKEFVNSEGIFCKCGKKIPIYT----VSAQLESQIRNHNSIYYNAWLLCNDPSCANRTR 1272
Query: 1147 RCPLGLKTRLCT--TCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE 1204
+ +G+ + C+ C +++ Y++ LY QL ++ + ++ KA ++ +F +
Sbjct: 1273 Q--IGVYGKRCSIKNCQG-QMYFEYSDKMLYTQLLYYDTLFNVNKAREIAN----QFPNP 1325
Query: 1205 TYMGYC---------KMKQHVERFLESSAYNIVDLKKLFS 1235
+ C K++ + +L + VDL+ +FS
Sbjct: 1326 ESILICAEYNRERFEKVRYVTQSYLNHNRRRFVDLQSIFS 1365
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 34/177 (19%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
E+ +MF++D + D+ T+ LFGK + ++ + SC + +
Sbjct: 317 EDDGSLKMFWID-YTDL---NNTLCLFGKAYSRKFQKYVSCFLQIHE------------- 359
Query: 437 LKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP 496
V++ VY E ++ ++KI +FKS+ +KY F P VP +YL+V Y P
Sbjct: 360 ------VTMGDVYEEVSELFEKFKIDEFKSKPTSRKYVFEFPDVPHQCDYLKVLYPYTKP 413
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEV 552
+P + SG+TFS VFGT +S I GP WL E + F SWC+ E+
Sbjct: 414 TIPQNTSGNTFSRVFGTNTS----------IMGPCWLHIKEPQFTFGQNFSWCRLEL 460
>gi|259479896|tpe|CBF70539.1| TPA: catalytic subunit of the DNA polymerase alpha-primase complex
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1459
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/706 (36%), Positives = 401/706 (56%), Gaps = 57/706 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE---GEETGEANKG 618
+TN+ GN +RTL G R+ERNE++LLH F++ Y+ PDK K +K +E E +
Sbjct: 773 LTNIAGNSWARTLSGTRAERNEYILLHEFYKNKYICPDKYSSKLQKAEEIAQEGDEDDAT 832
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP++G YD+++++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 833 DKKKKDKYKGGLVFEPERGLYDRYVLVMDFNSLYPSIIQEYNICFTTVDRTSSAENENDE 892
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 893 KVPEVPASDAEQGILPRLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 952
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK LVE+ VIYGDTDS+MI+ N++
Sbjct: 953 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELVESKQLRVIYGDTDSVMINTNMDTIS 1012
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G ++K+ N+ YK LE+DID V++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1013 DALKVGEELKTAVNERYKLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDKLEVKG 1071
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLDNGFV 915
+D+ RR++ L+ EA + ++++IL S DD+ L +H++++++ ++ +
Sbjct: 1072 LDMKRREYCALSKEASQRLLNEIL--------SGDDQELVLNRVHDYLRELAGNMREYTI 1123
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA 975
P+ I +L+K PEEY +++ +P QVALR K ++ D ISYI+ G SE +
Sbjct: 1124 PVQKYVIYTKLSKRPEEYPNKETMPPAQVALR-ELARGKTVRPNDVISYIVTS-GDSETS 1181
Query: 976 T----QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
+ +R+Y +++ +K +S+LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD
Sbjct: 1182 SLPPAKRSYTLQDVIKPDSRLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDV 1241
Query: 1031 SLYRSQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLST 1088
Y+ + I + + V+++ + TC CK+ + E S
Sbjct: 1242 RKYQINTTTTNSTQNTEIFPLESQIPDSVRFESAARLTLTCRR--CKERSVFEG-LAASI 1298
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-- 1146
H C N C P T +I +L + KYYEGWL C++ C + TR
Sbjct: 1299 HMCKPTGLFCPNSSCGNPISTL--TIIAQLESQIRAQTSKYYEGWLVCDESTCGNRTRQI 1356
Query: 1147 -----RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS- 1198
RC P G + C Y+ Y+E Q+Y QL +F + D+ KA ++ S
Sbjct: 1357 SVYGHRCLGPRG-QAEGCLGRMAYE----YSEKQMYNQLLYFASLWDVDKARAAAEKESN 1411
Query: 1199 ----------IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
++F+ + + +K V+ +L+ V++ LF
Sbjct: 1412 EEKKDSIAALVEFNR---VRFGTIKGVVDAYLKKCGRQWVEMDALF 1454
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 253/567 (44%), Gaps = 124/567 (21%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE ++YEEV + Y + + R EDD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEVEEQGDIYEEVDDDGYKKIIRNRLDEDDFVVDDNGEGYA 65
Query: 116 EDGREIFDD---------DIEDVPQ-----KKEKHDKRKKNKNIQNPNAKGDIQKLLANM 161
+DGRE++++ D +D+P K+++ +++++ + I N +K A
Sbjct: 66 DDGREVWNEQTGQYSDESDDDDLPARGKAAKRKREEEKQRKEKINNGISKYFSSGAAAPT 125
Query: 162 PVKKKKKEEVQLNNDDVLADLLSEVNTTI----------------------APTLKLNTK 199
P K K +D LADLL EV+ + +P L T+
Sbjct: 126 P---KPKPVATAEDDAFLADLLGEVDNNVVSNTVPKHNVVKSETRRKVRILSPPLSEKTR 182
Query: 200 TNEIVIPKEE--PPAPTAKEY---LANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVM 254
T++ I E P P A+E + N P+ I P+ D + S+
Sbjct: 183 TSKPAIKDENSGPVPPVAEEPVLDMDNGDGPLDTNDDI---------PMSDTMPSSPVTK 233
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
VE A KEEP DD DN +E +++ +E
Sbjct: 234 AVERKSAVLIKEEPEDDD----------DN----------------MMEVVQATGHDE-- 265
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKC--------------AEWEAIQTE------P 354
+ + +V +S S PP ++K+ + A W ++ + P
Sbjct: 266 ------AKAPSVNISGSRPPPKIKKQPYATPASSSPVKSAADVNASWNDVRNKLNVLNSP 319
Query: 355 STSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSH 414
+++E + + + E R F+LD E G++ LFGKV K+N S+
Sbjct: 320 ASTETRAFGKLRPQDV-----AEQDGSLRFFWLDYTE----VNGSLCLFGKVKNKQNGSY 370
Query: 415 SSCCVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIE 470
+S V V +I RK+Y LPR K T E V + VY E DQ+ ++ ++ K +
Sbjct: 371 ASAFVKVDSILRKLYFLPREYRHKGGRETDEEVDMEDVYHEVDQMMSRLRVGMHKIKACT 430
Query: 471 KKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGP 530
+KYAF +PG+P +EYL++ Y PALP D G+TFSHVFGT +S E +L + I GP
Sbjct: 431 RKYAFEMPGIPKEAEYLKLLYPYDKPALPMDTKGETFSHVFGTNTSLFEQFVLWKNIMGP 490
Query: 531 SWLEFPEAE-KFPSRISWCKYEVQCNQ 556
WL+ EA+ + SWCK+E Q ++
Sbjct: 491 CWLKIEEADFSAVNNASWCKFECQTSK 517
>gi|451847719|gb|EMD61026.1| hypothetical protein COCSADRAFT_149455 [Cochliobolus sativus ND90Pr]
Length = 1470
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 281/720 (39%), Positives = 403/720 (55%), Gaps = 47/720 (6%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDKQ+GK
Sbjct: 764 IAAIAIKVQMLPLSKV-LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKQWGK 822
Query: 605 NK--KEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNIC 662
+K E E +KK + GGLV EP+KG YDKFI++MDFNSLYPSIIQEYNIC
Sbjct: 823 SKVKAEEEAAEGEEGADAKKKDKFKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEYNIC 882
Query: 663 FTTIPVRMLQDSDITTLCEYLPE--HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL 720
FTT+ + SDI+ + +PE D GILP I LV RR+VK LMK + + D
Sbjct: 883 FTTV-----ERSDISEDDDKVPEVPSDQDQGILPRLIATLVSRRREVKKLMKAKDATPDQ 937
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEV 780
L +DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL TK + E V
Sbjct: 938 LATWDIKQMALKLTANSMYGCLGYTKSRFYARPLAMLTTYKGREILRKTKEMAEEKALRV 997
Query: 781 IYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL 840
IYGDTDS+MI+ NV++ K+GN+ K E N Y+ LE+DID V++ +LL KKKYAA+
Sbjct: 998 IYGDTDSVMINTNVDNIQDAIKLGNEFKKEVNDSYRLLEIDIDNVFRRILLHAKKKYAAI 1057
Query: 841 SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ + +GK I E+KG+D+ RR++ L+ E +++ +L + + ++ IH
Sbjct: 1058 NMVPV-DGKYIEKLEVKGLDMRRREYCALSKETSTELLNFLLSGE-----DPEVVVEKIH 1111
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
H++++ + +P I QL K P+EY + ++P VQVALRL K +K D
Sbjct: 1112 NHLRELSKQMREYVIPPRKYTIYTQLGKNPKEYPNGNSMPSVQVALRL-MAKGKHVKAKD 1170
Query: 961 TISYIICED--GTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+S+II + G++E A + AY ++E LK +S LK D++YYL +QI P V RL PI GT
Sbjct: 1171 VMSFIITGESSGSAENAAKNAYPVDEVLKPDSGLKPDIDYYLHKQILPPVERLCAPISGT 1230
Query: 1018 DAVRIAECLGLDTSLYR-SQIKESIQQSEE-NILGVGEAEEVKYQFCDKFEFTCMNPSCK 1075
+ +A CLGLDTS YR S + QQ E + L + V++Q C C +C
Sbjct: 1231 NITLLAACLGLDTSKYRVSTVSGGAQQETEIHPLESQIPDSVRFQSCSPLWLRCR--TCT 1288
Query: 1076 QVNTVE-----APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
V + +PT S + +C C + ++ +L + + + YY
Sbjct: 1289 TVFPFQGLSPTSPTTASLQTISHSGIQCPAEGCGMTLQNI--SVVAQLESAIRQVVASYY 1346
Query: 1131 EGWLKCEDPGCSDLTR-------RC--PLGLKTRLCTTCHKYKLHR--VYTELQLYQQLS 1179
G++ C+DP CS+ TR RC P GL R C Y++ V+ +L YQ L
Sbjct: 1347 AGYVLCDDPQCSNRTRSISVYGHRCLGPKGL-ARDCLGKMTYEIKERDVWNQLLYYQSLF 1405
Query: 1180 FFHYICDITKALTKSDT---PSIKFDSETYM-GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ + D IK +E + +K VE++LE + V + LFS
Sbjct: 1406 DADRAGKMDGGIKSEDMERREKIKVLAEVNRERFDTLKGVVEKWLEKNGRQWVQMDSLFS 1465
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 165/593 (27%), Positives = 255/593 (43%), Gaps = 99/593 (16%)
Query: 69 GQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVEDGREIFDDDI- 126
G+ YE +E +Y+EV E+ Y + V R EDD++ D G+GYV+DGRE +DDD
Sbjct: 23 GKTRMSTYEVAEEEQLYDEVDEEGYKKIVRGRLDEDDFVVGDEGEGYVDDGREEWDDDQG 82
Query: 127 -----------EDVPQKKEKHDKRK------KNKNIQNPNAKGDIQKLLANMPVKKKKKE 169
ED K K KRK K K I N +K K A P K K
Sbjct: 83 RYRYAGTESEDEDERPAKGKAAKRKREEDEEKRKKIDNGISKYFSAKNAAMAP---KSKP 139
Query: 170 EVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVE 229
+ D + DLL E++T PTL +T +PIK E
Sbjct: 140 VATAADKDFMDDLLGEIDTN--PTLTSTIRT-----------------------RPIKTE 174
Query: 230 KK----IEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNS 285
+ + P E P + ++NDS + ++ E DDGL + DD S
Sbjct: 175 ARRKTRLLSPPISESRPAATKRRTNDSDSHMPGTPPAEAAEAD-DDGL--PIFHDDVPMS 231
Query: 286 QQTQDVLPEQAKVE------LQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEK 339
P VE ++IE E +E + + ++V ++ P + K
Sbjct: 232 DPPLQSSPVAKAVERRTQPGVKIEEEEDDLMEISEPTGQLGAPVASVNMAGRRPIAKI-K 290
Query: 340 KEHKCAEWEAIQTEPST------------------SEPQVHSRTADDSLPLATDHENKKV 381
+E+ + T+PS S P + A P E+ +
Sbjct: 291 QENVPTPAGSSPTKPSATNIDASSWNDVTSNLNVMSSPAPQTAGAGKLQPQDALEEDGSL 350
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS----EHL 437
RMF++D E G++ LFGKV +++ ++ SC + + NI RK+Y LPR +
Sbjct: 351 -RMFWIDYTE----LNGSLCLFGKVKDRKSGNYVSCFLKIDNILRKLYFLPREYRQVRGV 405
Query: 438 KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA 497
T E + ++ V E D I +++++ K + +KYAF L +P ++YL++ Y
Sbjct: 406 TTDEEIELSDVSDEVDSIMSKHRVNLHKIKPCTRKYAFELADIPKEADYLKLLYGYDKMP 465
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP-SRISWCKYEVQCNQ 556
L +DL+G+TFSHVFGT +S E +L + I GP WL+ + P + SWCK E Q +
Sbjct: 466 LSTDLTGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIDAPDFGPVANASWCKLEAQVVK 525
Query: 557 MEKIRITNVCGNV---------LS-RTLMGGRSERNEFLLLHAFHEKSYVLPD 599
I + + N+ LS RT + + E L+ A ++ L D
Sbjct: 526 PNNITVLSASDNLDAPPMTLMSLSLRTTFNAKDNKQEILMASAMIYDNFSLTD 578
>gi|414879513|tpg|DAA56644.1| TPA: hypothetical protein ZEAMMB73_505723 [Zea mays]
Length = 1526
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 279/708 (39%), Positives = 395/708 (55%), Gaps = 105/708 (14%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-------KEGEETG 613
++TN+ GN+ +TL G R++R E+LLLH+FH + ++ PDK + +NK K +TG
Sbjct: 805 QLTNISGNLWGKTLQGARAQRVEYLLLHSFHARKFIAPDK-FARNKELNSTKRKMNPDTG 863
Query: 614 EAN------------------KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
AN + K RK +Y+GGLVLEPKKG YDK+++L+DFNSLYPSI
Sbjct: 864 GANADDGAADPSVDDEVHNGDQSKARKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSI 923
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN 715
IQE+NICFTT+ + SD + LP +V TG+LP ++ LVE RR VK+ +K
Sbjct: 924 IQEFNICFTTVE----RSSDGSV--PNLPASKV-TGVLPELLRSLVERRRMVKSWLK--T 974
Query: 716 LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE- 774
S Q+DI+Q+ALKLTAN RF+A+PLA L+T +GREIL NT LV+
Sbjct: 975 ASGLKKQQFDIQQQALKLTAN-----------RFYAKPLAELITLQGREILQNTVDLVQN 1023
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSE----------------CNKLYKQL 818
NLN EVIYGDTDS+MI ++D I ++ E NK Y+ L
Sbjct: 1024 NLNLEVIYGDTDSIMIHTGLDDISRAKAIAGKVIQEMCKLKKDGLTKNASIQVNKKYRCL 1083
Query: 819 ELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVI 878
E+D+DG+YK MLLLKKKKYAA+ ++ +G + + E KG+D+VRRDWS L+ + G F +
Sbjct: 1084 EIDLDGIYKRMLLLKKKKYAAIKVAL--DGSLRENIERKGLDMVRRDWSLLSKDIGDFCL 1141
Query: 879 SQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA 938
QIL + + DD +++IH + +++ + +G + L ITK LTKAPE+Y D K
Sbjct: 1142 KQIL-----SGGTCDDVVESIHSSLVQVQEQMRSGQIELEKYVITKSLTKAPEDYPDAKN 1196
Query: 939 LPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA-----TQRAYNIEELKNN-SKLK 992
PH VALRL GDT+ YIIC S+ A QRA + EELK + K
Sbjct: 1197 QPH--VALRLKQNGYSGCSAGDTVPYIICSQQDSDNAHSVGIAQRARHPEELKRDPDKWM 1254
Query: 993 IDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQ-SEENILGV 1051
ID++YYLSQQIHPVV+RL I+GT R+AECLGLD++ ++ ++ ES Q + +L V
Sbjct: 1255 IDIDYYLSQQIHPVVSRLCASIQGTSPARLAECLGLDSAKFQPRLTESSNQDTSMMLLSV 1314
Query: 1052 GEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECIN----------- 1100
+ E+ +Y+ C+ +C PSC + L T + + I
Sbjct: 1315 IDDEDERYRGCEPLRLSC--PSCSGTFDCPPVSSLITSASATSVSDPIEGKDATANFWRH 1372
Query: 1101 ---PEC--KVPPYTYLPHLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL-- 1152
P C + P ++ N++ + + +I YY+G C+D GC T L +
Sbjct: 1373 MRCPRCLDNTVESKFSPSMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSVNLRVMG 1432
Query: 1153 KTRLCTTCHKY-----KLHRVYTELQLYQQLSFFHYICDITKALTKSD 1195
+ T C Y +L R Y E LY+QLS+F Y+ D T+ L K D
Sbjct: 1433 DSERGTVCPNYPRCNGRLVRQYKESDLYRQLSYFCYVLDATRCLEKLD 1480
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 114/218 (52%), Gaps = 26/218 (11%)
Query: 384 MFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKT--- 439
+ LDA+E+ + GTVYLFGKV V + SCCVIV+NI R IY +P
Sbjct: 344 FYILDAYEEPFGANSGTVYLFGKVEVGKQ--FHSCCVIVKNIQRCIYAIPNRSVFPMDSI 401
Query: 440 ----KEPVS--IAQVYSEFDQIATQYK-----------ILDFKSRKIEKKYAFNLPGVPD 482
+ P + + + + ++A+ K + +F +++ YAF +P+
Sbjct: 402 SGIERNPTADLLPSLRATLHELASGLKSEIADKLSDLNVSNFIMTPVKRNYAFERTDLPN 461
Query: 483 LSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
+Y L++ Y K PALP+DL G+ F + GT +S LE L++RK+KGPSWL +
Sbjct: 462 GEQYVLKINYPYKDPALPADLRGEHFHALLGTNNSALELFLIKRKVKGPSWLSVSKFVTR 521
Query: 542 PS--RISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGG 577
PS R+SWCK+EV + + I + N+ T++ G
Sbjct: 522 PSTQRVSWCKFEVTVDCPKDISVLTTSTNLEVPTVVVG 559
>gi|428168063|gb|EKX37013.1| DNA polymerase alpha subunit one [Guillardia theta CCMP2712]
Length = 997
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/514 (45%), Positives = 337/514 (65%), Gaps = 27/514 (5%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG---------EE 611
++TN+ GN+ SR+L+ R+ER E+LLLH F + +V+PDK NKK+G E
Sbjct: 465 QLTNLAGNLWSRSLLSARAERVEYLLLHEFQKLKFVMPDKATF-NKKKGNKDDSNFDDEA 523
Query: 612 TGEAN-KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM 670
+AN K RKKAAYSGGLVL+PK+G YDK I+L+DFNSLYP+IIQE+NICFTT+
Sbjct: 524 EDDANPKWSKRKKAAYSGGLVLDPKRGLYDKHILLLDFNSLYPTIIQEFNICFTTVLPS- 582
Query: 671 LQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
+++ T +P +D G+LP IK LVE RR VK ++K+ ++ Q DIRQ A
Sbjct: 583 -SNTEEETPRYEMPSKDLDEGVLPRVIKTLVERRRSVKEIIKKETDATK-RQQLDIRQSA 640
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLM 789
LK+ ANSMYGCLGF SRF+A+PLA L+TA+GRE+L T + +N LN EV+YGDTDS+
Sbjct: 641 LKIMANSMYGCLGFTYSRFYAKPLAELITAQGRELLQKTVEVTQNKLNLEVVYGDTDSIF 700
Query: 790 ISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGK 849
++ + Y+ K N+ + E NK+++ LE+ +DG+Y +LLL KKKYAALS+++ +GK
Sbjct: 701 VNSGCDTYEEAVKTANEARKELNKMWRLLEVGLDGIYCPLLLLNKKKYAALSVTE-RDGK 759
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
+ +E KG+D+VRRDW LA AG ++ IL + ++D ++NIH +++++ TD
Sbjct: 760 ITKVKEKKGLDIVRRDWCVLAKRAGDKILDFIL-----SGNPVEDVVENIHTYLRQLATD 814
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
++N +PL+ ITK LTK PEEY+D K PHVQVA+++ + ++ GD I Y+IC D
Sbjct: 815 MENNSLPLSDYVITKGLTKEPEEYSDGKTQPHVQVAIKMKE-RGRPVRAGDHIPYVICAD 873
Query: 970 GTSEAATQRAYNIEELKNNS-KLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
QRA++ E ++ + KL +D +YL Q+HPVV+R+ IEGTD+ RIAECLGL
Sbjct: 874 PNITMFAQRAHDPELVEEAAGKLTLDKKWYLESQLHPVVSRICAVIEGTDSGRIAECLGL 933
Query: 1029 DTSLYRSQIKESIQQSEENILGVGEAEEVKYQFC 1062
D + + ES +S+ N V V+ Q C
Sbjct: 934 DATKFHKN--ES--RSQSNFDSVFAQPAVEVQCC 963
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 129/229 (56%), Gaps = 21/229 (9%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENN----SHSSCCVIVQNIDRKIYLLPRSEHL 437
+ F++DA+ED+ K GTV+LFGK+ ++ N+ + SCC+ V+N+ R++++LPR + L
Sbjct: 22 LKFFWIDAYEDVSKA-GTVFLFGKIKIQNNDLDKPTFMSCCIHVENLQRQVFVLPREKLL 80
Query: 438 -----KTKEPVSIA-QVYSEFDQIATQYKILDFKSRKIEKKYAFNL--PGVPDLSEYLEV 489
+E V + V+ EF + A I K++ +++ Y ++ P +P S+YL+
Sbjct: 81 DKDGNAMEEDVDLMNHVFPEFAKFARDAGIKKHKAKLVKRNYMYHFQDPSIPKSSQYLKF 140
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCK 549
Y A+ PA+ SDL+G +F VFGT S LE LLL+RK+ GP WL AE + +SWCK
Sbjct: 141 VYPAEFPAVASDLAGRSFKKVFGTTQSCLELLLLKRKLMGPCWLNIQGAEPVSTPLSWCK 200
Query: 550 YEVQCNQMEKIRITNV--------CGNVLSRTLMGGRSERNEFLLLHAF 590
YE + + I+ + V +V +T+ R NE +L A
Sbjct: 201 YEFRVADSKWIQKSTVYMETPPLRVMSVHMQTVKNLRDHSNEVAMLSAL 249
>gi|452989094|gb|EME88849.1| hypothetical protein MYCFIDRAFT_35428 [Pseudocercospora fijiensis
CIRAD86]
Length = 1475
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 273/724 (37%), Positives = 398/724 (54%), Gaps = 68/724 (9%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN---KKEGEETGEANKG 618
+TN+ GN +RTL G RSERNE++LLH F+ Y+ PDK +GK K E +
Sbjct: 773 LTNLAGNSWARTLSGTRSERNEYILLHEFYRNKYICPDKVWGKGALKKTEEADAEGEEGA 832
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK + GGLV EP+KG YDKFI++MDFNSLYPS+IQEYNICFTT+ SD
Sbjct: 833 DAKKKDKFKGGLVFEPEKGLYDKFILVMDFNSLYPSLIQEYNICFTTV-----DRSDFAE 887
Query: 679 LCEYLPEHQVDT---GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+ +PE DT GILP I+ LV RR+VK LMK + + D L +D++Q ALKLTA
Sbjct: 888 EDDRVPEVPEDTSNKGILPRLIRTLVSRRREVKKLMKDKSATEDQLATWDVKQMALKLTA 947
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN-YEVIYGDTDSLMISCNV 794
NSMYGCLG+ SRF+A+PLAAL T+KGRE+L TK L E+ + VIYGDTDS+M++ NV
Sbjct: 948 NSMYGCLGYTKSRFYARPLAALTTSKGREVLQATKDLAESAHALRVIYGDTDSVMVNTNV 1007
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
++ K+G + + N+ Y+ LE++ID +++ +LL KKKYAA+ + +
Sbjct: 1008 DNILDALKMGKEFQKSVNERYELLEIEIDHIFRRLLLHAKKKYAAIQMVDTGDNTWKEKL 1067
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
++KG+D+ RR++ QL+ E K +++ +L + + + IH+H++++ + N
Sbjct: 1068 DVKGLDMKRREYCQLSKETSKELLNHLLSGE-----EPEVVVSKIHDHLRQLGEKMRNKE 1122
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED--GTS 972
+P+ I QL K P++Y + +P VQVAL+ K++ D +S++IC D G
Sbjct: 1123 IPVHKYTIYTQLGKNPKDYPNGSTMPAVQVALK-RMAKGKQVHAKDVMSFVICGDSEGKQ 1181
Query: 973 EAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
E A + AY++E+ L +S L DV+YYL +QI P V RL PI GT+ +AECLGLDTS
Sbjct: 1182 EHAAKNAYDLEDVLAKDSGLAPDVDYYLHKQILPPVERLCAPISGTNVTLLAECLGLDTS 1241
Query: 1032 LYR--SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ----------VNT 1079
YR K S Q +E L + V+Y+ C+ + C+ CKQ +
Sbjct: 1242 KYRVSGAAKSSEQSNEITRLESQIPDHVRYKDCEPLDLLCLG--CKQHFEYRGMNYEADP 1299
Query: 1080 VEAPT----RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLK 1135
E P L+ G+ C ECK T L +L + ++ +YY WLK
Sbjct: 1300 AETPITPIGTLTNDGIA-----CPRAECKKRMATL--SLTAQLETQIRRHTARYYSAWLK 1352
Query: 1136 CEDPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDIT 1188
C++P C TR RC LG K L C ++ Y+E LY QL + I D+
Sbjct: 1353 CDEPTCGIRTRQISVYGHRC-LGPKG-LAYGCSG-RMSFEYSEKALYNQLLYLQSIFDVD 1409
Query: 1189 KALTKSDTPS-------IKFDSETYMGYCKMK-----QHVERFLESSAYNIVDLKKLFSC 1236
K+L K +K ++ G + + V+ +L+ S + V + LF
Sbjct: 1410 KSLEKMGAGGLVKPEYELKEKAKVLAGMNRDRFAVCWDVVKAYLDKSGWGWVSMDSLFGF 1469
Query: 1237 EEKQ 1240
KQ
Sbjct: 1470 AMKQ 1473
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 166/603 (27%), Positives = 263/603 (43%), Gaps = 120/603 (19%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGD 112
+ + A + L+ G+ YE E++YE V ++ Y + V R +DD++ DD G+
Sbjct: 5 RAERLAQLRALRK-AGKTAFDDYEVQEAESIYETVDDEGYKKVVRSRLDQDDFVVDDNGE 63
Query: 113 GYVEDGREIFDDDIE---------DVPQK-KEKHDKRKKNKNIQNPNAKGDIQKLL---A 159
GY +DGRE + D+ + D+P+ K KR+++ Q KG I K
Sbjct: 64 GYADDGREDWQDERQPMDDSESDDDLPRNSKAAKRKREEDAERQEKLTKG-ISKYFNQKT 122
Query: 160 NMPVKKKKKEEVQLNNDDVLADLLSEVNTTI---APTLKLNTKTNE-----IVIPKEE-- 209
N K K + +DD +ADLL EV+ + AP+ K+N+ ++ P E
Sbjct: 123 NNAAPKPKPVRTR-EDDDFMADLLGEVDANVQSRAPSYGKAIKSNDRRKTRVLSPPLEDR 181
Query: 210 ------------------PPAPTAKE---YLAN-------FSKPIKVEKKIEKPIKKEPS 241
PPA A + Y+ S P+ + +KE S
Sbjct: 182 EPVRHSQNKPAAAPVDSSPPAMIANDDDGYVVPQDDDVPMMSDPLPSSPAAKAVERKEQS 241
Query: 242 PLKDEIKSNDSVMEV-EMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVEL 300
+K E + +ME+ E+N + K V N + ++ P+ AK
Sbjct: 242 TIKAEEAEEEDLMEIAEVNAGSKLKSANV--------------NIRGSRPA-PKLAKPAY 286
Query: 301 QI--EAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSE 358
+ S++ E VD+T + +V+S + + +SP + V S
Sbjct: 287 PTPDSSSPSRTPAEDVDMTAINNVASKLNILSSPAQETV-------------------SA 327
Query: 359 PQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCC 418
++ SR A E+ R F+ D E G++ LFGKV + + SC
Sbjct: 328 GKLDSRDA---------LEDDGSLRFFWTDYTE----VNGSLCLFGKVKNRRMGGYVSCF 374
Query: 419 VIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYA 474
V V NI RK+Y LPR K T E + + VY E DQ+ T+ K+ K + +KYA
Sbjct: 375 VKVDNILRKLYFLPREHRQKGGKDTTEEIDFSDVYQEVDQLMTRNKVAMHKIKASTRKYA 434
Query: 475 FNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLE 534
F LPG+P +EYL++ Y PA+ +D G+TFSHVFGT ++ E +L + I GP WL
Sbjct: 435 FELPGIPKEAEYLKLLYPYDKPAISTDYRGETFSHVFGTNTALFEQFVLWKNIMGPCWLS 494
Query: 535 FPEAE-KFPSRISWCKYEVQCNQMEKIRITNVCGNVLS----------RTLMGGRSERNE 583
A+ + SWCK E+Q ++ + I N+ + RT + +NE
Sbjct: 495 IEGADFNAVNNASWCKLELQVSRPKGITTLGESDNLEAPPLTMMSMSLRTTFNAKENKNE 554
Query: 584 FLL 586
L+
Sbjct: 555 ILV 557
>gi|154271065|ref|XP_001536386.1| hypothetical protein HCAG_08707 [Ajellomyces capsulatus NAm1]
gi|150409609|gb|EDN05053.1| hypothetical protein HCAG_08707 [Ajellomyces capsulatus NAm1]
Length = 1458
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 268/698 (38%), Positives = 394/698 (56%), Gaps = 42/698 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE-ANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK GK ++ + E +
Sbjct: 775 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKYAGKQQQMSQTNEEDEDGTDK 834
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK+I++MDFNSLYPSIIQE+NICFTT+ + +++
Sbjct: 835 KKKDKYKGGLVFEPEKGLYDKYILVMDFNSLYPSIIQEFNICFTTVDRTSVVENENQENV 894
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ Q GILP I LV RR+VK LMK S + L +D +Q ALKLTANSMYG
Sbjct: 895 PEVPKAQ-SMGILPRLIATLVNRRREVKKLMKDKRASPEDLALWDTKQMALKLTANSMYG 953
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL +TK L E+ +VIYGDTDS+MI+ N ++ +
Sbjct: 954 CLGYTQSRFYARPLAMLTTFKGREILRSTKELAESNQLQVIYGDTDSVMINTNADNMEDA 1013
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1014 LKVGNTFKRLVNERYQLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVEQLEVKGLD 1072
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++ +IL + D L +H++++ I + +PL
Sbjct: 1073 MKRREYCALSKEVSSKLLHEILSGEDS-----DVVLTKVHDYLRDITKKIKEYSIPLQKY 1127
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAATQ 977
I +L+K P EY +++ +P QVALR K ++ D I+YI+ D +S A +
Sbjct: 1128 VIYMKLSKRPNEYPNKETMPAAQVALR-ELARGKTVRPNDVIAYIVTTGDSDTSSLAPAK 1186
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K +S LK DV YYL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1187 RSYTLQDVMKPDSGLKPDVEYYLLKQIFPPIERLCGPIPGTDAVRLAECLGLDVKKYQIN 1246
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTRLST-HGVV 1092
S Q I + +F D T C + E T + T +G++
Sbjct: 1247 TSSSRDQQNMEIFPLESQIPDSIRFKDAVRLTLRCRFCHERTCFEGLCLSTEMCTANGLI 1306
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT------- 1145
C N C P++ + ++ +L + KYYEGWL C+DP C + T
Sbjct: 1307 -----CPNSTCG-KPFSVI-SVVAQLETQIRAQTSKYYEGWLVCDDPSCGNRTRQMSVYG 1359
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA--LTKSDTPSIKFDS 1203
RRC LG + R + YT+ QLY QL +F + D+ KA + +T + K D
Sbjct: 1360 RRC-LGPRGRAEGCLGQMGFE--YTDKQLYNQLLYFARLWDVDKAKEAAQKETNTEKRDK 1416
Query: 1204 ETYM------GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
M + +K V+ +L+ VD++ LF
Sbjct: 1417 VIAMVEWNRSRFGTLKGVVDAYLKKCGRQWVDMEVLFG 1454
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 246/553 (44%), Gaps = 80/553 (14%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +LK L+ G K YE + N+Y+E+ E Y + V KR +DD++ DD G+GY
Sbjct: 6 AKLAELKALRAAGKKRLATYEVKDEGNIYDEIDEDGYKKLVRKRLDQDDFVIDDTGEGYA 65
Query: 116 EDGREIFDD--------DIEDVP------QKKEKHDKRKKNKNIQNPNAKGDIQKLLANM 161
+DGRE ++D D +++P ++K + D+++K K I N I K
Sbjct: 66 DDGREEWNDSKHYYSDSDGDELPLTGKAAKRKREEDQQRKEK-INN-----GISKYFNTG 119
Query: 162 PVKKKKKEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYL 219
P K K + +D +A LL EV+T +P PP T K
Sbjct: 120 PASKASKPKPVATAEDEAFMAGLLEEVDTK--------------PLPSRLPPKKTVK--- 162
Query: 220 ANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLW----- 274
+ + I++ P + S + K ND+ + +A +++ +P +D W
Sbjct: 163 SETRRKIRILS--PPPSQDSASKQPKDRKENDTSSPL---IAPKAELDPENDSTWLDAGH 217
Query: 275 -EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS-- 331
+ + + D S + + K +++E E + T V+ A T
Sbjct: 218 DDDVFMSDPTPSSPVARAIDRKIKNNIKVEEEEEDELMAVTQTTAHHDVNGARINMTGKR 277
Query: 332 PPPQVVEKKEHKCAEWEAIQTEPSTSEPQ----VHSRTADDSLPLATDH----------- 376
P P+V E A ++ P +P V S+ S P TD
Sbjct: 278 PVPKVKEPTYPSPATSSPLRANPDGIDPSSWNDVTSKLNVLSSPATTDFKTFGKLSAQDA 337
Query: 377 -ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSE 435
E F+LD E G++ LFGKV K+ ++ S + N+ RK+Y LPR
Sbjct: 338 IEENGSLLFFWLDYVE----VNGSLCLFGKVKNKKTGAYVSAFAKIDNVLRKLYFLPRKY 393
Query: 436 HLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY 491
++ T+E + + VY+E D + ++ K KS+ +KYAF L VP EYL+V Y
Sbjct: 394 RVRHGRETEEEIDMEDVYNEVDDLMSRTKAGTHKSKVSTRKYAFELADVPKEGEYLKVMY 453
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKY 550
S PAL D+ G+TFS VFGT ++ E +L + I GP WL+ +A+ + SWCK
Sbjct: 454 SYDKPALAFDVKGETFSRVFGTNTALFEQFVLWKNIMGPCWLKLEDADFTAVNGASWCKL 513
Query: 551 EVQCNQMEKIRIT 563
E Q ++ + I +
Sbjct: 514 ECQVSEPKLITVA 526
>gi|67539524|ref|XP_663536.1| hypothetical protein AN5932.2 [Aspergillus nidulans FGSC A4]
gi|40738605|gb|EAA57795.1| hypothetical protein AN5932.2 [Aspergillus nidulans FGSC A4]
Length = 2019
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/651 (38%), Positives = 380/651 (58%), Gaps = 43/651 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE---GEETGEANKG 618
+TN+ GN +RTL G R+ERNE++LLH F++ Y+ PDK K +K +E E +
Sbjct: 773 LTNIAGNSWARTLSGTRAERNEYILLHEFYKNKYICPDKYSSKLQKAEEIAQEGDEDDAT 832
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP++G YD+++++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 833 DKKKKDKYKGGLVFEPERGLYDRYVLVMDFNSLYPSIIQEYNICFTTVDRTSSAENENDE 892
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 893 KVPEVPASDAEQGILPRLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 952
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK LVE+ VIYGDTDS+MI+ N++
Sbjct: 953 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELVESKQLRVIYGDTDSVMINTNMDTIS 1012
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G ++K+ N+ YK LE+DID V++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1013 DALKVGEELKTAVNERYKLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDKLEVKG 1071
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRTDLDNGFV 915
+D+ RR++ L+ EA + ++++IL S DD+ L +H++++++ ++ +
Sbjct: 1072 LDMKRREYCALSKEASQRLLNEIL--------SGDDQELVLNRVHDYLRELAGNMREYTI 1123
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA 975
P+ I +L+K PEEY +++ +P QVALR K ++ D ISYI+ G SE +
Sbjct: 1124 PVQKYVIYTKLSKRPEEYPNKETMPPAQVALR-ELARGKTVRPNDVISYIVTS-GDSETS 1181
Query: 976 T----QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
+ +R+Y +++ +K +S+LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD
Sbjct: 1182 SLPPAKRSYTLQDVIKPDSRLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDV 1241
Query: 1031 SLYRSQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLST 1088
Y+ + I + + V+++ + TC CK+ + E S
Sbjct: 1242 RKYQINTTTTNSTQNTEIFPLESQIPDSVRFESAARLTLTCRR--CKERSVFEG-LAASI 1298
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-- 1146
H C N C P T +I +L + KYYEGWL C++ C + TR
Sbjct: 1299 HMCKPTGLFCPNSSCGNPISTLT--IIAQLESQIRAQTSKYYEGWLVCDESTCGNRTRQI 1356
Query: 1147 -----RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC P G + C Y+ Y+E Q+Y QL +F + D+ KA
Sbjct: 1357 SVYGHRCLGPRG-QAEGCLGRMAYE----YSEKQMYNQLLYFASLWDVDKA 1402
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 250/553 (45%), Gaps = 96/553 (17%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE ++YEEV + Y + + R EDD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEVEEQGDIYEEVDDDGYKKIIRNRLDEDDFVVDDNGEGYA 65
Query: 116 EDGREIFDD---------DIEDVPQ-----KKEKHDKRKKNKNIQNPNAKGDIQKLLANM 161
+DGRE++++ D +D+P K+++ +++++ + I N +K A
Sbjct: 66 DDGREVWNEQTGQYSDESDDDDLPARGKAAKRKREEEKQRKEKINNGISKYFSSGAAAPT 125
Query: 162 PVKKKKKEEVQLNNDDVLADLLSEVNTTI----------------------APTLKLNTK 199
P K K +D LADLL EV+ + +P L T+
Sbjct: 126 P---KPKPVATAEDDAFLADLLGEVDNNVVSNTVPKHNVVKSETRRKVRILSPPLSEKTR 182
Query: 200 TNEIVIPKEE--PPAPTAKEY---LANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVM 254
T++ I E P P A+E + N P+ I P+ D + S+
Sbjct: 183 TSKPAIKDENSGPVPPVAEEPVLDMDNGDGPLDTNDDI---------PMSDTMPSSPVTK 233
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
VE A KEEP DD D + + Q ++AK S +I
Sbjct: 234 AVERKSAVLIKEEPEDD---------DDNMMEVVQATGHDEAKAP-------SVNISGSR 277
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTE------PSTSEPQVHSRTADD 368
++ A S+SP V+ A W ++ + P+++E + +
Sbjct: 278 PPPKIKKQPYATPASSSP----VKSAADVNASWNDVRNKLNVLNSPASTETRAFGKLRPQ 333
Query: 369 SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKI 428
+ E R F+LD E G++ LFGKV K+N S++S V V +I RK+
Sbjct: 334 DVA-----EQDGSLRFFWLDYTE----VNGSLCLFGKVKNKQNGSYASAFVKVDSILRKL 384
Query: 429 YLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLS 484
Y LPR K T E V + VY E DQ+ ++ ++ K + +KYAF +PG+P +
Sbjct: 385 YFLPREYRHKGGRETDEEVDMEDVYHEVDQMMSRLRVGMHKIKACTRKYAFEMPGIPKEA 444
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPS 543
EYL++ Y PALP D G+TFSHVFGT +S E +L + I GP WL+ EA+ +
Sbjct: 445 EYLKLLYPYDKPALPMDTKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIEEADFSAVN 504
Query: 544 RISWCKYEVQCNQ 556
SWCK+E Q ++
Sbjct: 505 NASWCKFECQTSK 517
>gi|258577025|ref|XP_002542694.1| hypothetical protein UREG_02210 [Uncinocarpus reesii 1704]
gi|237902960|gb|EEP77361.1| hypothetical protein UREG_02210 [Uncinocarpus reesii 1704]
Length = 1460
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 255/650 (39%), Positives = 385/650 (59%), Gaps = 46/650 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE-TGEANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK GK++ + EE G+ +
Sbjct: 777 LTNLAGNSWARTLTGTRAERNEYILLHEFYRNKYICPDKYSGKSQPKMEEHEGDDDGADK 836
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK++++MDFNSLYPSIIQEYNICFTT+ ++ +++
Sbjct: 837 KKKDKYKGGLVFEPEKGLYDKYVLVMDFNSLYPSIIQEYNICFTTVNRELVSENENEEKV 896
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P Q GILP I LV RR+VK LMK + + L +D +Q ALKLTANSMYG
Sbjct: 897 PRVPTDQAQ-GILPRLISTLVSRRREVKKLMKNKRATPEELALWDTKQLALKLTANSMYG 955
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREILLNTK L E VIYGDTDS+MI+ N ++ +
Sbjct: 956 CLGYTQSRFYARPLAMLTTFKGREILLNTKELAEKNQLRVIYGDTDSVMINTNADNVEEA 1015
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+G K N YK LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1016 LKVGRDFKRLVNDSYKLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDHLEVKGLD 1074
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++++IL + + L ++++++ + + +P+
Sbjct: 1075 MKRREYCALSKEVSSKLLTEILSGE-----DTEVVLGKVYDYLRDLAQKMKEFTIPVQKY 1129
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA---TQ 977
I +L+K P+EY +++ +P QVALR K ++ D ISYI+ T A+ +
Sbjct: 1130 VIFTKLSKRPDEYPNKETMPPAQVALR-ELARGKTIRPNDVISYIVTSGDTETASLPPAK 1188
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K +S LK D+ +YL +QI P + RL PI GTDAV++AECLGLD Y Q
Sbjct: 1189 RSYTLQDVMKQDSGLKPDIEFYLLKQIFPPIERLCAPIPGTDAVQLAECLGLDVKKY--Q 1246
Query: 1037 IKESIQQSEENI----LGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLST---- 1088
I S +++++ L + ++++ +F C +C++ E + S
Sbjct: 1247 INTSSTHNQQSLELCPLESQIPDALRFEKAARFTLRCR--TCRERTIFEGLSVSSNACTP 1304
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-- 1146
+G+V C N CK P++ + ++ +L + KYYEGWL C+DP C + TR
Sbjct: 1305 NGLV-----CPNTNCK-KPFSVI-SIVAQLENQIRAQTTKYYEGWLVCDDPACHNRTRQM 1357
Query: 1147 -----RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
RC LG + R C Y+ YTE QLY Q+ +F + D+ K
Sbjct: 1358 SVYGHRC-LGPRGRAEGCLGRMSYE----YTEKQLYNQMLYFSSLWDVDK 1402
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 190/712 (26%), Positives = 303/712 (42%), Gaps = 140/712 (19%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE + ++YEEV E+ Y + V +R DD++ DD G+GY
Sbjct: 6 AKLAELRALRASGKKRLATYEVEEEGDIYEEVDEEGYKKVVRQRLDRDDFVVDDNGEGYA 65
Query: 116 EDGREIFD------DDIEDVPQKKEKHDKRKKNKNI-QNPNAKGDIQKLLANM---PVKK 165
+DGRE +D D P + K KRK+ ++ + I K +N P
Sbjct: 66 DDGREEWDTRQADSGSESDEPALRGKAAKRKREEDKHRKEKINNGINKYFSNAFAAPNAT 125
Query: 166 KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKP 225
K K ++ +A LL E++T +A + +L K KP
Sbjct: 126 KPKRNATAEDEAFMAGLLEEMDTNVASS-RLPVK------------------------KP 160
Query: 226 IKVEKK-----IEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQID 280
+K E + I P +E +P+K K +V+ +++ +S + DD + M D
Sbjct: 161 VKSETRRKVRIISPPRSQESTPIKP--KEQKTVIPAKIDTEPKSDIDFDDDAGYLPMGGD 218
Query: 281 DWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVD----------VTNVESV----SSAV 326
D D LP + V +E ++ S++++ + +T E+ ++A
Sbjct: 219 D---DGPMSDPLP-SSPVAKAVERRKASSVKQEDESMDDMDDEEFMTVAEATGHNEANAA 274
Query: 327 ELSTS---PPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADD--------------S 369
++ + PPPQ K + P++S P + A D S
Sbjct: 275 RVNMTGKRPPPQPKVK--------DTAYPSPTSSSPVRANSDAIDPSSWTDVTKRLNVLS 326
Query: 370 LPLATDHENKKV-----------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCC 418
P H K+ R+F+ D E G + LFGKV K + S
Sbjct: 327 SPPQETHAFGKLRAEDAVEADGSLRLFWFDYTE----VNGALCLFGKVKNKRTGKYVSAF 382
Query: 419 VIVQNIDRKIYLLPRS-EHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNL 477
V V NI RK+Y LPR + T E I VY E D++ T+ ++ K + E+KYAF L
Sbjct: 383 VKVDNILRKLYFLPRKHDGQNTDEEADIENVYQEVDRLMTKLRVGTHKIKPCERKYAFEL 442
Query: 478 PGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPE 537
P +P ++YL++ YS PALP D+ G+TFSHVFGT +S E +L + I GP WL+ +
Sbjct: 443 PDIPKEAKYLKLMYSYAKPALPIDVQGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIED 502
Query: 538 AE-KFPSRISWCKYEVQCNQMEKI----------RITNVCGNVLSRTLMGGRSERNEFLL 586
A+ + SWCK E Q + E I T ++ RT + + + E L+
Sbjct: 503 ADFTAINGASWCKLECQVSDPELISSISDSENLDHPTFTLMSLALRTQLNVKENKQEILV 562
Query: 587 LHA-FHEKSYV--------LPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKG 637
A +E + LP K + + G + + RK + G +LE +
Sbjct: 563 ASARVYENVSLTDTTPPEKLPCKTFTVMRPSGSTYPIGFEAETRK---HRGTFMLEKSEQ 619
Query: 638 F-YDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQV 688
F KF+ L F + P ++ + LQ+ D+T L L E +
Sbjct: 620 FLLSKFLAL--FEKMDPDVVMGHQ----------LQEVDLTILINRLKEKKT 659
>gi|240276502|gb|EER40014.1| DNA-directed DNA polymerase alpha [Ajellomyces capsulatus H143]
Length = 1458
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 267/698 (38%), Positives = 393/698 (56%), Gaps = 42/698 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE-ANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK GK ++ + E +
Sbjct: 775 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKYAGKQQQMSQANDEDEDGTDK 834
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK+I++MDFNSLYPSIIQE+NICFTT+ + +++
Sbjct: 835 KKKDKYKGGLVFEPEKGLYDKYILVMDFNSLYPSIIQEFNICFTTVDRTSVVENENQENV 894
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ Q GILP I LV RR+VK LMK S + L +D +Q ALKLTANSMYG
Sbjct: 895 PEVPKAQ-SMGILPRLIATLVNRRREVKKLMKDKRASPEDLALWDTKQMALKLTANSMYG 953
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL +TK L E+ +VIYGDTDS+MI+ N ++ +
Sbjct: 954 CLGYTQSRFYARPLAMLTTFKGREILRSTKELAESNQLQVIYGDTDSVMINTNADNMEDA 1013
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1014 LKVGNTFKRLVNERYQLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVEQLEVKGLD 1072
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++ +IL + D L +H++++ I + +PL
Sbjct: 1073 MKRREYCALSKEVSSKLLHEILSGEDS-----DVVLTKVHDYLRDITEKMKEYSIPLQKY 1127
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAATQ 977
I +L+K P EY +++ +P QVALR K ++ D I+YI+ D +S A +
Sbjct: 1128 VIYMKLSKRPNEYPNKETMPAAQVALR-ELARGKTVRPNDVIAYIVTTGDSDTSSLAPAK 1186
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K +S LK DV YYL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1187 RSYTLQDVVKPDSGLKPDVEYYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVKKYQIN 1246
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTRLST-HGVV 1092
S Q I + +F D T C + E T + T +G++
Sbjct: 1247 TSSSRDQQNMEIFPLESQIPDSIRFKDAVRLTLRCRFCHERTCFEGLCLSTEMCTANGLI 1306
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT------- 1145
C + C P++ + ++ +L + KYYEGWL C+DP C + T
Sbjct: 1307 -----CPSSTCG-KPFSVI-SIVAQLETQIRAQTSKYYEGWLVCDDPSCGNRTRQMSVYG 1359
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA--LTKSDTPSIKFDS 1203
RRC LG + R + YT+ QLY QL +F + D+ KA +T + K D
Sbjct: 1360 RRC-LGPRGRAEGCLGQMGFE--YTDKQLYNQLLYFARLWDVDKAKEAAAKETSTEKRDK 1416
Query: 1204 ETYM------GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
M + +K V+ +L+ VD++ LF
Sbjct: 1417 VIAMVEWNRSRFGTLKGVVDAYLKKCGRQWVDMEVLFG 1454
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 156/555 (28%), Positives = 249/555 (44%), Gaps = 84/555 (15%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +LK L+ G K YE + ++Y+E+ E Y + V KR +DD++ DD G+GY
Sbjct: 6 AKLAELKALRAAGKKRLATYEVKDEGDIYDEIDEDGYKKLVRKRLDQDDFVIDDTGEGYA 65
Query: 116 EDGREIFDD--------DIEDVP------QKKEKHDKRKKNKNIQNPNAKGDIQKLLANM 161
+DGRE ++D D +++P ++K + D+++K K I N I K +
Sbjct: 66 DDGREEWNDSKHYYSDSDGDELPLTGKAAKRKREEDQQRKEK-INN-----GISKYFSTG 119
Query: 162 PVKKKKKEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK--- 216
P K K + +D +A LL EV+T +P PP T K
Sbjct: 120 PTSKASKPKPVATAEDEAFMAGLLEEVDTK--------------PLPSRLPPKKTVKSET 165
Query: 217 -EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLW- 274
+ S P + +KP KD K ND+ + +A +++ +P +D W
Sbjct: 166 RRKIRILSPPPSQDSASKKP--------KDR-KENDTSSPL---IAPKAELDPENDSTWL 213
Query: 275 -----EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELS 329
+ + + D S + + +++E E + T V+ A
Sbjct: 214 DAGHDDDVFMSDPTPSSPVARAVDRKITNNIKVEEEEEDELMAVTQTTAHHDVNGARINM 273
Query: 330 TS--PPPQVVEKKEHKCAEWEAIQTEPSTSEPQ----VHSRTADDSLPLATDHENKKVFR 383
T P P+V E A ++ P +P V S+ S P TD K +
Sbjct: 274 TGKRPVPKVKEPTYPSPATSSPLRANPDGIDPSSWNDVTSKLNVLSSPATTDF--KTFGK 331
Query: 384 MFFLDAFE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
+ DA E D + G++ LFGKV K+ ++ S + N+ RK+Y LPR
Sbjct: 332 LAAQDAIEENGSLLFFWLDYVEVNGSLCLFGKVKNKKTGAYVSAFAKIDNVLRKLYFLPR 391
Query: 434 SEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ T+E + + VY+E D + ++ K KS+ +KYAF L GVP EYL+V
Sbjct: 392 KYRVRHGRETEEEIDMEDVYNEVDGLMSRTKAGTHKSKVSTRKYAFELAGVPKEGEYLKV 451
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWC 548
Y PALP D+ G+TFS VFGT ++ E +L + I GP WL+ +A+ + SWC
Sbjct: 452 MYLYDKPALPLDVKGETFSRVFGTNTALFEQFVLWKNIMGPCWLKLEDADFTAVNGASWC 511
Query: 549 KYEVQCNQMEKIRIT 563
K E Q ++ + I +
Sbjct: 512 KLECQVSEPKLITVA 526
>gi|317026709|ref|XP_001399392.2| DNA polymerase alpha catalytic subunit [Aspergillus niger CBS 513.88]
Length = 1444
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/595 (39%), Positives = 354/595 (59%), Gaps = 21/595 (3%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K K E+ E + +
Sbjct: 778 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSSKLLKAEEKMQEGDDDESA 837
Query: 622 KKAAYS---GGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
K GGLV EP+KG YDKFI++MDFNSLYPSIIQEYNICFTT+ D+D
Sbjct: 838 DKKKKDKYKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEYNICFTTVERTATADNDKEE 897
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 898 KVPEVPTSDQEQGILPKLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 957
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 958 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTIS 1017
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G++ K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1018 DALKVGDEFKKSVNERYRLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDKLEVKG 1076
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L + + L +H++++++ + VP+
Sbjct: 1077 LDMKRREYCSLSKEVSQKLLNEVLSGEDQ-----EVVLNRVHDYLRELAEKMREFSVPVQ 1131
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE---DGTSEAA 975
I +L+K PEEY +++++P VQVALR K ++ D ISY++ + +S A
Sbjct: 1132 KYVIYTKLSKRPEEYPNKESMPPVQVALR-ELARGKSVRPNDVISYVVTNGDAETSSLAP 1190
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y +++ +K +S LK D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1191 AKRSYTLQDVMKPDSGLKPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQ 1250
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVV 1092
Q +I + + V+++ + TC CK+ + E + STH
Sbjct: 1251 INSSSGSNQQNADIFPLESQIPDSVRFENATRLTLTCR--FCKEKSVFEGLAQ-STHMCT 1307
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
C N C+ P++ L ++ +L + KYYEGWL C+D C + TR+
Sbjct: 1308 ANGIICPNQACQ-KPFSVL-TIVAQLEAQIRAQTSKYYEGWLVCDDTACGNRTRQ 1360
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 253/547 (46%), Gaps = 83/547 (15%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE ++YEEV ++ Y + + R +DD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLSTYEVEEQGDIYEEVDDEGYKKIIRNRLDQDDFVVDDNGEGYA 65
Query: 116 EDGREIFDDDIED----------VPQKKEKHDKRKKNKNIQNPNAKGDIQKLL--ANMPV 163
+DGRE++++ D +P + + ++++ + + I K P
Sbjct: 66 DDGREVWNERTADYGDSESEDDELPARGKAAKRKREEEKQRQEKINNGISKYFNSGAAPS 125
Query: 164 KKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFS 223
K K +D +ADLL EV+T + P T IV K E A+ + S
Sbjct: 126 APKPKPVATAEDDAFMADLLGEVDTNVVPH---RVPTRNIV--KTE-----ARRKVRILS 175
Query: 224 KPIKVEKKIEKPIKKEP-----SPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQ 278
P+ + E+PIKK+ SP+KD+ E+N + DDG M
Sbjct: 176 PPLADRTRKERPIKKDENSDPVSPVKDQ---------PELNFDD-------DDGALPGMD 219
Query: 279 IDD------WDNSQQTQDVLPEQAKVELQIEAIES--QSIEEKVDVT--NVESVSSAVEL 328
DD +S ++ V + +++E + I E VT N +S
Sbjct: 220 DDDVPMSDPMPSSPISKAVERKSTTTPVKVEEFDDDDNDIMEIAQVTGQNDAKATSINMA 279
Query: 329 STSPPPQVVEKKEHKCAEWEAIQTEP----STSEPQVHSRTADDSLPLATDH-------- 376
+ PPP++ KKE A + T+P S V S+ S P +++
Sbjct: 280 GSRPPPKL--KKESTPALASSSPTKPMPEVDASWNDVRSKLNVLSSPASSEMRSFGKLRA 337
Query: 377 ----ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
E RMF+LD F ++ G++ LFGKV K+N S++S V V NI RK+Y LP
Sbjct: 338 QDVVEEDGSLRMFWLD-FTEVN---GSLCLFGKVKNKQNGSYASAFVKVDNILRKLYFLP 393
Query: 433 RSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
R K T E V + VY E D + ++ ++ K + +KYAF LPGVP +EYL+
Sbjct: 394 REYRHKNGRETDEEVDMEDVYHEVDGMMSRLRVGMHKMKPCTRKYAFELPGVPKETEYLK 453
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISW 547
+ Y LP D+ G+TFSHVFGT +S E +L + I GP WL+ EA+ + SW
Sbjct: 454 LFYPYDKSPLPMDVKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLKIEEADFTAVNNASW 513
Query: 548 CKYEVQC 554
CK+E Q
Sbjct: 514 CKFECQA 520
>gi|226289752|gb|EEH45236.1| DNA polymerase alpha catalytic subunit [Paracoccidioides brasiliensis
Pb18]
Length = 1459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/698 (37%), Positives = 390/698 (55%), Gaps = 42/698 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE-ANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK GK ++ + E +
Sbjct: 775 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKYAGKYQQMSQANEEDEDGTGK 834
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP++G YDK+I++MDFNSLYPSIIQE+NICFTT+ ++ +++
Sbjct: 835 KKKDKYKGGLVFEPERGLYDKYILVMDFNSLYPSIIQEFNICFTTVDRALVAENENEEKV 894
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P Q GILP I LV RR+VK LMK S + L +D +Q ALKLTANSMYG
Sbjct: 895 PEVPTEQA-PGILPRLIATLVNRRREVKKLMKDKRASPEDLALWDTKQMALKLTANSMYG 953
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+ LA L T+KGREIL +TK L E+ +VIYGDTDS+MI+ N ++ +
Sbjct: 954 CLGYTQSRFYARSLAMLTTSKGREILRSTKELAESNQLQVIYGDTDSVMINTNADNIEEA 1013
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ YK LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1014 LKVGNTFKRLVNERYKLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDQLEVKGLD 1072
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++++IL D L +H++++++ + +P+
Sbjct: 1073 MKRREYCALSKEVSSKLLNEILSGD-----DPDVVLTKVHDYLRELTEKMKEFAIPVQKY 1127
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA---TQ 977
I +L+K P+EY +++ +P QVALR K ++ D ISYI+ ++ ++ +
Sbjct: 1128 VIYTKLSKGPDEYPNKETMPPAQVALR-ELARGKTVRPNDVISYIVTSGDSNTSSLPPAK 1186
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K +S LK DV YYL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1187 RSYTLQDVIKPDSGLKPDVEYYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQIN 1246
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTR----LSTHGVV 1092
I + Q I + +F D T C + E + + +G+V
Sbjct: 1247 ISNTRDQQNMEIFPLESQIPDSIRFKDASRLTLRCRFCHERTFFEGLSSSAEMCTANGLV 1306
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT------- 1145
C N C P + ++ +L + KYYEGWL C+DP C + T
Sbjct: 1307 -----CPNTACGKP--FNIISIVAQLESQIRAQTAKYYEGWLVCDDPSCGNRTRQMSVYG 1359
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSET 1205
RRC LG + R + YTE QLY QL ++ + D+ KA +D E
Sbjct: 1360 RRC-LGPRGRAEGCLGRMGFE--YTEKQLYNQLLYYARLWDVDKAKVAADKEPDPEKREK 1416
Query: 1206 YM--------GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
M + +K V+ +L+ VD+ LF
Sbjct: 1417 IMVMVEWNRARFGTVKGVVDAYLKKCGRQWVDMGVLFG 1454
Score = 123 bits (309), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 14/219 (6%)
Query: 350 IQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVK 409
+ + P+ S+ + + A P A + + +F F+LD E G + LFGKV K
Sbjct: 317 VLSSPAASDFKTFGKLA---APDAVEEDGSLLF--FWLDYVE----INGNLCLFGKVKNK 367
Query: 410 ENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFK 465
++ S+ S V V NI RK+Y LPR ++ T+E + + VY E ++ + K+ K
Sbjct: 368 KSGSYVSAFVKVDNILRKLYFLPRQYRVRHGCETEEEIDMEDVYKEVAELMSAAKVTKHK 427
Query: 466 SRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLER 525
++ +KYAF LP +P + YL++ YS LP D+ G+TFSHVFGT ++ E +L +
Sbjct: 428 IKESVRKYAFELPDIPKQATYLKLMYSYDSSPLPVDVKGETFSHVFGTNTALFEQFVLWK 487
Query: 526 KIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQMEKIRIT 563
I GP WL+ A+ + SWCK E Q +Q + I +
Sbjct: 488 NIMGPCWLKLGNADFTAVNGASWCKLECQVSQPKLITVV 526
>gi|225682359|gb|EEH20643.1| DNA polymerase alpha catalytic subunit A [Paracoccidioides
brasiliensis Pb03]
Length = 1459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/698 (37%), Positives = 390/698 (55%), Gaps = 42/698 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE-ANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK GK ++ + E +
Sbjct: 775 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKCAGKYQQMSQANEEDEDGTGK 834
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP++G YDK+I++MDFNSLYPSIIQE+NICFTT+ ++ +++
Sbjct: 835 KKKDKYKGGLVFEPERGLYDKYILVMDFNSLYPSIIQEFNICFTTVDRALVAENENEEKV 894
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P Q GILP I LV RR+VK LMK S + L +D +Q ALKLTANSMYG
Sbjct: 895 PEVPTEQA-PGILPRLIATLVNRRREVKKLMKDKRASPEDLALWDTKQMALKLTANSMYG 953
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+ LA L T+KGREIL +TK L E+ +VIYGDTDS+MI+ N ++ +
Sbjct: 954 CLGYTQSRFYARSLAMLTTSKGREILRSTKELAESNQLQVIYGDTDSVMINTNADNIEEA 1013
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ YK LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1014 LKVGNTFKRLVNERYKLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDQLEVKGLD 1072
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++++IL D L +H++++++ + +P+
Sbjct: 1073 MKRREYCALSKEVSSKLLNEILSGD-----DPDVVLTKVHDYLRELTEKMKEFAIPVQKY 1127
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA---TQ 977
I +L+K P+EY +++ +P QVALR K ++ D ISYI+ ++ ++ +
Sbjct: 1128 VIYTKLSKGPDEYPNKETMPPAQVALR-ELARGKTVRPNDVISYIVTSGDSNTSSLPPAK 1186
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K +S LK DV YYL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1187 RSYTLQDVIKPDSGLKPDVEYYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQIN 1246
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTR----LSTHGVV 1092
I + Q I + +F D T C + E + + +G+V
Sbjct: 1247 ISNTRDQQNMEIFPLESQIPDSIRFKDASRLTLRCRFCHERTFFEGLSSSAEMCTANGLV 1306
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT------- 1145
C N C P + ++ +L + KYYEGWL C+DP C + T
Sbjct: 1307 -----CPNTACGKP--FNIISIVAQLESQIRAQTAKYYEGWLVCDDPSCGNRTRQMSVYG 1359
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSET 1205
RRC LG + R + YTE QLY QL ++ + D+ KA +D E
Sbjct: 1360 RRC-LGPRGRAEGCLGRMGFE--YTEKQLYNQLLYYARLWDVDKAKVAADKEPDPEKREK 1416
Query: 1206 YM--------GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
M + +K V+ +L+ VD+ LF
Sbjct: 1417 IMVMVEWNRARFGTVKGVVDAYLKKCGRQWVDMGVLFG 1454
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 14/219 (6%)
Query: 350 IQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVK 409
+ + P+ S+ + + A P A + + +F F+LD E G + LFGKV K
Sbjct: 317 VLSSPAASDFKTFGKLA---APDAVEEDGSLLF--FWLDYVE----INGNLCLFGKVKNK 367
Query: 410 ENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFK 465
++ S+ S V V NI RK+Y LPR ++ T+E + + VY E ++ + K+ K
Sbjct: 368 KSGSYVSAFVKVDNILRKLYFLPRQYRVRHGRETEEEIDMEDVYKEVAELMSAAKVTKHK 427
Query: 466 SRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLER 525
++ +KYAF LP +P + YL++ YS LP D+ G+TFSHVFGT ++ E +L +
Sbjct: 428 IKESVRKYAFELPDIPKQATYLKLMYSYDSSPLPVDVKGETFSHVFGTNTALFEQFVLWK 487
Query: 526 KIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQMEKIRIT 563
I GP WL+ A+ + SWCK E Q +Q + I +
Sbjct: 488 NIMGPCWLKLENADFTAVNGASWCKLECQVSQPKLITVV 526
>gi|327302928|ref|XP_003236156.1| DNA polymerase alpha catalytic subunit [Trichophyton rubrum CBS
118892]
gi|326461498|gb|EGD86951.1| DNA polymerase alpha catalytic subunit [Trichophyton rubrum CBS
118892]
Length = 1467
Score = 421 bits (1083), Expect = e-114, Method: Compositional matrix adjust.
Identities = 261/652 (40%), Positives = 377/652 (57%), Gaps = 47/652 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-KEGEETGEANKGKG 620
+TN+ GN SRTL G R+ERNE++LLH F+ Y+ PDK KN+ K E GE
Sbjct: 783 LTNLAGNSWSRTLSGTRAERNEYILLHEFYRGKYICPDKYGHKNQIKVEENEGEEEGVDK 842
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK +++MDFNSLYPSIIQE+NICFTT+ ++D
Sbjct: 843 KKKEKYKGGLVFEPEKGLYDKHVLVMDFNSLYPSIIQEFNICFTTVDRHASSENDREESV 902
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ GILP I LV RR+VK LMK + + + L +D +Q ALKLTANSMYG
Sbjct: 903 PEVPDSDQPLGILPRLIATLVSRRREVKKLMKDKSATPEELALWDTKQLALKLTANSMYG 962
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL NTK L E VIYGDTDS+MI+ N ++
Sbjct: 963 CLGYTQSRFYARPLAMLTTFKGREILRNTKELAETNQLRVIYGDTDSVMINTNTDNVQEA 1022
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN+ K N+ Y+ LE+DID V+K +LL KKKYAA+++S++ +GK + E+KG+D
Sbjct: 1023 LKVGNEFKRLVNQRYRLLEIDIDNVFKRLLLHAKKKYAAINLSEV-DGKYVERLEVKGLD 1081
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQNIHEHMKKIRTDLDNGFVPL 917
+ RR++ L+ E ++ +IL S DD L IH++++++ + +P+
Sbjct: 1082 MKRREFCALSKEVSTKLLHEIL--------SGDDVEVVLNKIHDYLRELAQKMHEYAIPV 1133
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT- 976
I +L+K P+EY +++ +P QVALR K ++ D ISYI+ G SE ++
Sbjct: 1134 QKYVIYTKLSKKPDEYPNKETMPPAQVALR-ELARGKSVRPNDVISYIVTL-GDSETSSL 1191
Query: 977 ---QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSL 1032
+R+Y +++ +K +S LK DV +YL +QI P + RL PI GTDA R+AECLGLD
Sbjct: 1192 QPAKRSYTLQDVIKPDSGLKPDVEFYLLKQIFPPIERLCAPIPGTDAARLAECLGLDVRK 1251
Query: 1033 YR--SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHG 1090
Y+ S Q++E L + ++++ + C C++ +T E G
Sbjct: 1252 YQISSNATHGQQETELCALESQIPDSIRFEKAARLTLQCR--FCRKKSTFE--------G 1301
Query: 1091 VVFVLDEC-----INPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT 1145
+V D C + PE + ++ +L + +YYEGWL C+D C + T
Sbjct: 1302 LVASRDMCSPNGLLCPEPSCGKAFTVISIVAQLESQIRAQTAQYYEGWLVCDDSACGNRT 1361
Query: 1146 R-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
R RC LG + R C ++H Y+E QLY QL +F + D+ KA
Sbjct: 1362 RQMSVYGQRC-LGPRGR-AEGCLG-RMHYEYSEKQLYNQLLYFAGLWDVEKA 1410
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 150/563 (26%), Positives = 251/563 (44%), Gaps = 84/563 (14%)
Query: 55 TNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGG 111
+++ +LK L+ G K YE DE++YE+V E+ Y + V KR DD++ DD G
Sbjct: 2 SSRAKTLAELKALRASGKKRLSTYEVQEDEDIYEQVDEEGYKKVVRKRLDRDDFVVDDNG 61
Query: 112 DGYVEDGREIFDD--------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPV 163
+GY +DGRE +DD D + +P + + ++++ N + I K
Sbjct: 62 EGYADDGREEWDDTRLAASDSDSDGLPVRGKAAKRKREEDNKKKEEINNGINKYFTATLT 121
Query: 164 KKKKKEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLAN 221
K+ K + DD LAD+L +V T IAP LK+ P K +
Sbjct: 122 KQTSKPKPVATADDEAFLADILGDVETNIAP-LKV----------------PVKKSVKSE 164
Query: 222 FSKPIKVEKKIEKPIKKEPSPLKDEI-KSNDSVMEVEMNVAEQSKEEPV--DDGLWEQMQ 278
+ +++ + P + +P K EI + NDS + + A+ E+ V D G
Sbjct: 165 TRRKVRI---VSPPAQPKPRVKKTEIDQENDSPHPKDNSAADAEFEDDVFLDGG------ 215
Query: 279 IDDWDNSQQTQDVLPEQAKVELQIEAI--ESQSIEEKVD---------------VTNVES 321
DD S+Q P + VE + Q I +K + V + +
Sbjct: 216 DDDAIMSEQPLPSSPVASAVERKTAGASRSKQVIIKKEEDDDDGDDDMLDVAEAVADHSA 275
Query: 322 VSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKV 381
+ +V + PP V+K+ + + + + P+ + ++ + ++ + + + N V
Sbjct: 276 NTPSVNMVGKRPPPKVKKEVYD----DPMASSPARATTEMINPSSWNDVTNKLNVLNSSV 331
Query: 382 FRM--FFLDAFEDIYKQPGTVYLFGKVFVKENNS--------------HSSCCVIVQNID 425
M F ++ ++ G++ F + + N S + S V V NI
Sbjct: 332 TDMQRFGKLTCQEAVEEDGSLKFFWLDYTEINGSLCLFGKVKNKTNNSYVSAFVKVDNIL 391
Query: 426 RKIYLLPRS----EHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
RK+Y LPR T E V + VY E D I ++ K+ K + +KYAF LP +P
Sbjct: 392 RKLYFLPREYKYVRGQSTSEEVDMEDVYGEVDNIMSRSKVEMHKIKPCTRKYAFELPDIP 451
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-K 540
+EYL++ Y PALP +L G+TFSHVFGT ++ E +L + I GP WL+ +A+
Sbjct: 452 KEAEYLKLMYPYTKPALPMELKGETFSHVFGTNTALFEQFVLWKNIMGPCWLKIEDADFT 511
Query: 541 FPSRISWCKYEVQCNQMEKIRIT 563
+ SWCK E + +I +
Sbjct: 512 AVNGASWCKLECEVTNPAEISLV 534
>gi|325091995|gb|EGC45305.1| DNA-directed DNA polymerase alpha [Ajellomyces capsulatus H88]
Length = 1458
Score = 421 bits (1083), Expect = e-114, Method: Compositional matrix adjust.
Identities = 267/698 (38%), Positives = 393/698 (56%), Gaps = 42/698 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE-ANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK GK ++ + E +
Sbjct: 775 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKYAGKQQQMSQANDEDEDGTDK 834
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK+I++MDFNSLYPSIIQE+NICFTT+ + +++
Sbjct: 835 KKKDKYKGGLVFEPEKGLYDKYILVMDFNSLYPSIIQEFNICFTTVDRTSVVENENQENV 894
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ Q GILP I LV RR+VK LMK S + L +D +Q ALKLTANSMYG
Sbjct: 895 PEVPKAQ-SMGILPRLIATLVNRRREVKKLMKDKRASPEDLALWDTKQMALKLTANSMYG 953
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL +TK L E+ +VIYGDTDS+MI+ N ++ +
Sbjct: 954 CLGYTQSRFYARPLAMLTTFKGREILRSTKELAESNQLQVIYGDTDSVMINTNADNMEDA 1013
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1014 LKVGNTFKRLVNERYQLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVEQLEVKGLD 1072
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++ +IL + D L +H++++ I + +PL
Sbjct: 1073 MKRREYCALSKEVSSKLLHEILSGEDS-----DVVLTKVHDYLRDITEKMKEYSIPLQKY 1127
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAATQ 977
I +L+K P EY +++ +P QVALR K ++ D I+YI+ D +S A +
Sbjct: 1128 VIYMKLSKRPNEYPNKETMPAAQVALR-ELARGKTVRPNDVIAYIVTTGDSDTSSLAPAK 1186
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K +S LK DV YYL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1187 RSYTLQDVVKPDSGLKPDVEYYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVKKYQIN 1246
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTRLST-HGVV 1092
S Q I + +F D T C + E T + T +G++
Sbjct: 1247 TSSSRDQQNMEIFPLESQIPDSIRFKDAVRLTLRCRFCHERTCFEGLCLSTEMCTANGLI 1306
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT------- 1145
C + C P++ + ++ +L + KYYEGWL C+DP C + T
Sbjct: 1307 -----CPSSTCG-KPFSVI-SIVAQLETQIRAQTSKYYEGWLVCDDPSCGNRTRQMSVYG 1359
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA--LTKSDTPSIKFDS 1203
RRC LG + R + YT+ QLY QL +F + D+ KA +T + K D
Sbjct: 1360 RRC-LGPRGRAEGCLGQMGFE--YTDKQLYNQLLYFARLWDVDKAKEAAAKETNTEKRDK 1416
Query: 1204 ETYM------GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
M + +K V+ +L+ VD++ LF
Sbjct: 1417 VIAMVEWNRSRFGTLKGVVDAYLKKCGRQWVDMEVLFG 1454
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 156/555 (28%), Positives = 249/555 (44%), Gaps = 84/555 (15%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +LK L+ G K YE + ++Y+E+ E Y + V KR +DD++ DD G+GY
Sbjct: 6 AKLAELKALRAAGKKRLATYEVKDEGDIYDEIDEDGYKKLVRKRLDQDDFVIDDTGEGYA 65
Query: 116 EDGREIFDD--------DIEDVP------QKKEKHDKRKKNKNIQNPNAKGDIQKLLANM 161
+DGRE ++D D +++P ++K + D+++K K I N I K +
Sbjct: 66 DDGREEWNDSKHYYSDSDGDELPLTGKAAKRKREEDQQRKEK-INN-----GISKYFSTG 119
Query: 162 PVKKKKKEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK--- 216
P K K + +D +A LL EV+T +P PP T K
Sbjct: 120 PTSKASKPKPVATAEDEAFMAGLLEEVDTK--------------PLPSRLPPKKTVKSET 165
Query: 217 -EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLW- 274
+ S P + +KP KD K ND+ + +A +++ +P +D W
Sbjct: 166 RRKIRILSPPPSQDSASKKP--------KDR-KENDTSSPL---IAPKAELDPENDSTWL 213
Query: 275 -----EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELS 329
+ + + D S + + +++E E + T V+ A
Sbjct: 214 DAGHDDDVFMSDPTPSSPVARAVDRKITNNIKVEEEEEDELMAVTQTTAHHDVNGARINM 273
Query: 330 TS--PPPQVVEKKEHKCAEWEAIQTEPSTSEPQ----VHSRTADDSLPLATDHENKKVFR 383
T P P+V E A ++ P +P V S+ S P TD K +
Sbjct: 274 TGKRPVPKVKEPTYPSPATSSPLRANPDGIDPSSWNDVTSKLNVLSSPATTDF--KTFGK 331
Query: 384 MFFLDAFE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
+ DA E D + G++ LFGKV K+ ++ S + N+ RK+Y LPR
Sbjct: 332 LAAQDAIEENGSLLFFWLDYVEVNGSLCLFGKVKNKKTGAYVSAFAKIDNVLRKLYFLPR 391
Query: 434 SEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ T+E + + VY+E D + ++ K KS+ +KYAF L GVP EYL+V
Sbjct: 392 KYRVRHGRETEEEIDMEDVYNEVDGLMSRTKAGTHKSKVSTRKYAFELAGVPKEGEYLKV 451
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWC 548
Y PALP D+ G+TFS VFGT ++ E +L + I GP WL+ +A+ + SWC
Sbjct: 452 MYLYDKPALPLDVKGETFSRVFGTNTALFEQFVLWKNIMGPCWLKLEDADFTAVNGASWC 511
Query: 549 KYEVQCNQMEKIRIT 563
K E Q ++ + I +
Sbjct: 512 KLECQVSEPKLITVA 526
>gi|225555681|gb|EEH03972.1| DNA-directed DNA polymerase alpha [Ajellomyces capsulatus G186AR]
Length = 1458
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 267/698 (38%), Positives = 393/698 (56%), Gaps = 42/698 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE-ANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK GK ++ + E +
Sbjct: 775 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKYAGKQQQMSQANEEDEDGADK 834
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP+KG YDK+I++MDFNSLYPSIIQE+NICFTT+ + +++
Sbjct: 835 KKKDKYKGGLVFEPEKGLYDKYILVMDFNSLYPSIIQEFNICFTTVDRTSVVENENQENV 894
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ Q GILP I LV RR+VK LMK S + L +D +Q ALKLTANSMYG
Sbjct: 895 PEVPKAQ-SMGILPRLIATLVNRRREVKKLMKDKRASPEDLALWDTKQMALKLTANSMYG 953
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T KGREIL +TK L E+ +VIYGDTDS+MI+ N ++ +
Sbjct: 954 CLGYTQSRFYARPLAMLTTFKGREILRSTKELAESNQLQVIYGDTDSVMINTNADNMEDA 1013
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1014 LKVGNTFKRLVNERYQLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVEQLEVKGLD 1072
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++ +IL + D L +H++++ I + +PL
Sbjct: 1073 MKRREYCALSKEVSSKLLHEILSGEDS-----DVVLTKVHDYLRDITEKMKEYSIPLQKY 1127
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAATQ 977
I +L+K P EY +++ +P QVALR K ++ D I+YI+ D +S A +
Sbjct: 1128 VIYMKLSKRPNEYPNKETMPAAQVALR-ELARGKTVRPNDVIAYIVTTGDSDTSSLAPAK 1186
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K +S LK DV YYL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1187 RSYTLQDVVKPDSGLKPDVEYYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVKKYQIN 1246
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTRLST-HGVV 1092
S Q I + +F D T C + E T + T +G++
Sbjct: 1247 TSSSRDQQNMEIFPLESQIPDSIRFKDAVRLTLRCRFCHERTCFEGLCLSTEMCTANGLI 1306
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT------- 1145
C + C P++ + ++ +L + KYYEGWL C+DP C + T
Sbjct: 1307 -----CPSSTCG-KPFSVI-SIVAQLETQIRAQTSKYYEGWLVCDDPSCGNRTRQMSVYG 1359
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA--LTKSDTPSIKFDS 1203
RRC LG + R + YT+ QLY QL +F + D+ KA +T + K D
Sbjct: 1360 RRC-LGPRGRAEGCLGQMGFE--YTDKQLYNQLLYFARLWDVDKAKEAAAKETNTEKRDK 1416
Query: 1204 ETYM------GYCKMKQHVERFLESSAYNIVDLKKLFS 1235
M + +K V+ +L+ VD++ LF
Sbjct: 1417 VIAMVEWNRSRFGTLKGVVDAYLKKCGRQWVDMEVLFG 1454
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 156/555 (28%), Positives = 249/555 (44%), Gaps = 84/555 (15%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +LK L+ G K YE + ++Y+E+ E Y + V KR +DD++ DD G+GY
Sbjct: 6 AKLAELKALRAAGKKRLATYEVKDEGDIYDEIDEDGYKKLVRKRLDQDDFVIDDTGEGYA 65
Query: 116 EDGREIFDD--------DIEDVP------QKKEKHDKRKKNKNIQNPNAKGDIQKLLANM 161
+DGRE ++D D +++P ++K + D+++K K I N I K +
Sbjct: 66 DDGREEWNDSKHYYSDSDGDELPLTGKAAKRKREEDQQRKEK-INN-----GISKYFSTG 119
Query: 162 PVKKKKKEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK--- 216
P K K + +D +A LL EV+T +P PP T K
Sbjct: 120 PTSKASKPKPVATAEDEAFMAGLLEEVDTK--------------PLPSRLPPKKTVKSET 165
Query: 217 -EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLW- 274
+ S P + +KP KD K ND+ + +A +++ +P +D W
Sbjct: 166 RRKIRILSPPPSQDSASKKP--------KDR-KENDTSSPL---IAPKAELDPENDSTWL 213
Query: 275 -----EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELS 329
+ + + D S + + +++E E + T V+ A
Sbjct: 214 DAGHDDDVFMSDPTPSSPVARAVDRKITNNIKVEEEEEDELMAVTQTTAHHDVNGARINM 273
Query: 330 TS--PPPQVVEKKEHKCAEWEAIQTEPSTSEPQ----VHSRTADDSLPLATDHENKKVFR 383
T P P+V E A ++ P +P V S+ S P TD K +
Sbjct: 274 TGKRPVPKVKEPTYPSPATSSPLRANPDGIDPSSWNDVTSKLNVLSSPATTDF--KTFGK 331
Query: 384 MFFLDAFE----------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
+ DA E D + G++ LFGKV K+ ++ S + N+ RK+Y LPR
Sbjct: 332 LAAQDAIEENGSLLFFWLDYVEVNGSLCLFGKVKNKKTGAYVSAFAKIDNVLRKLYFLPR 391
Query: 434 SEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ T+E + + VY+E D + ++ K KS+ +KYAF L VP EYL+V
Sbjct: 392 KYRVRHGRETEEEIDMEDVYNEVDDLMSRTKAGTHKSKVSTRKYAFELADVPKEGEYLKV 451
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWC 548
YS PALP D+ G+TFS VFGT ++ E +L + I GP WL+ +A+ + SWC
Sbjct: 452 MYSYDKPALPLDVKGETFSRVFGTNTALFEQFVLWKNIMGPCWLKLEDADFTAVNGASWC 511
Query: 549 KYEVQCNQMEKIRIT 563
K E Q ++ + I +
Sbjct: 512 KLECQVSEPKLITVA 526
>gi|239615018|gb|EEQ92005.1| DNA polymerase alpha catalytic subunit [Ajellomyces dermatitidis
ER-3]
gi|327357152|gb|EGE86009.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1458
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 263/698 (37%), Positives = 393/698 (56%), Gaps = 42/698 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE-ANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK GK ++ + E +
Sbjct: 775 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKYGGKQQQMSQANEEDEDGADK 834
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV P+KG YDK+I++MDFNSLYPSIIQE+NICFTT+ + +++
Sbjct: 835 KKKDKYKGGLVFPPEKGLYDKYILVMDFNSLYPSIIQEFNICFTTVDRAAVVENENEEKV 894
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P +Q GILP I LV RR+VK LMK S + L +D +Q ALKLTANSMYG
Sbjct: 895 PKVPSNQ-SPGILPRLIATLVNRRREVKKLMKDKRASPEDLALWDTKQMALKLTANSMYG 953
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T+KGREIL +TK L EN +VIYGDTDS+MI+ N ++ +
Sbjct: 954 CLGYTQSRFYARPLAMLTTSKGREILRSTKELAENNQLQVIYGDTDSVMINTNTDNMEDA 1013
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1014 LKVGNTFKRLVNERYQLLEIDIDSVFRRLLLHAKKKYAAMTMTEI-DGKYVDQLEVKGLD 1072
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++++IL + D L +H+++++I + +P+
Sbjct: 1073 MKRREYCALSKEVSSKLLNEILSGE-----DPDMVLTKVHDYLREITEKMKEYTIPVQKY 1127
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAATQ 977
I +L+K P+EY +++ +P QVALR K ++ D I+YI+ D +S +
Sbjct: 1128 VIYTKLSKRPDEYPNKETMPPAQVALR-ELARGKTVRPNDVIAYIVTTGDSDTSSLPPAK 1186
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K S LK DV YYL +QI P V RL P+ GTDAVR+AECLGLD Y+
Sbjct: 1187 RSYTLQDVMKPESGLKPDVEYYLLKQIFPPVERLCAPLPGTDAVRLAECLGLDVKKYQIN 1246
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTRLST-HGVV 1092
+ Q I + +F D T C + + E T + T +G++
Sbjct: 1247 TSSTRDQQNMEIFPLESQIPDSIRFKDAVRLTLRCRFCHERTSFEGLCVSTEMCTANGLI 1306
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT------- 1145
C N C P+T + + +L + KYYEGWL C+D C + T
Sbjct: 1307 -----CPNSGCG-KPFTVI-SIAAQLESQIRAQTSKYYEGWLVCDDSSCGNRTRQMSVYG 1359
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSET 1205
RRC LG + R + + YT+ QLY QL +F + D+ KA ++ + E
Sbjct: 1360 RRC-LGPRGRAESCLGRMGFE--YTDKQLYNQLLYFARLWDVDKAKEIAEKETNAEKREK 1416
Query: 1206 YMGYCK--------MKQHVERFLESSAYNIVDLKKLFS 1235
M + +K V+ +L+ VD++ LF
Sbjct: 1417 IMAMVEWNRPRFETLKGVVDAYLKKCGRQWVDMEVLFG 1454
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 250/554 (45%), Gaps = 84/554 (15%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE + ++Y+E+ E+ Y + V KR +DD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLTTYEVEDEGDIYDEIDEEGYKKLVRKRLDQDDFVIDDTGEGYA 65
Query: 116 EDGREIFDD--------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK-- 165
+DGRE ++D D +++P + + ++++ + I K P K
Sbjct: 66 DDGREEWNDSKQYYSDSDGDELPLRGKAAKRKREEDQQRKEKINNGISKYFNTGPAAKAP 125
Query: 166 -KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K K ++ LADLL EV++ P + V+PK K
Sbjct: 126 SKPKPVATAEDEAFLADLLEEVDSN--PVSR--------VLPK----------------K 159
Query: 225 PIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMN-----VAEQSKEEPVDDGLWEQMQI 279
+K E + + ++ PL S + E N VA + + +P +D W
Sbjct: 160 AVKSETR--RKVRIISPPLSQNTTSEAAKDRKENNISSPLVASKVELDPDNDTTWLDAGD 217
Query: 280 DDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS-------- 331
DD P VE +I EE+ ++ V ++ +++ +
Sbjct: 218 DDDVFMSDPAPSSPVTKAVERKIPKNIKVEEEEEDELMVVTQTTAHHDINGARINMTGKR 277
Query: 332 PPPQVVEKKEHKCAEWEAIQTEPSTSEPQ----VHSR--------TADD------SLPLA 373
P P+V E K A I+ P +P V S+ TAD + P A
Sbjct: 278 PTPKVKEPKYPSPATSSPIRANPDGIDPSSWNDVTSKLNVLSSPATADFKTFGKLAAPSA 337
Query: 374 TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
+ + +F F+LD E G++ LFGKV K+ + S V NI RK+Y LPR
Sbjct: 338 VEEDGSLLF--FWLDYVE----INGSLCLFGKVKNKDTGDYVSAFAKVDNILRKLYFLPR 391
Query: 434 SEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ T+E + + VY E D + ++ K+ K +++ +KYAF LP VP EYL++
Sbjct: 392 KYRVRHGHETEEEIDMEDVYKEVDALLSRTKVGTHKIKEVTRKYAFELPDVPKEGEYLKL 451
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWC 548
YS PALP D+ G+TFS VFG ++ E +L + I GP WL+F +A+ + SWC
Sbjct: 452 MYSYDKPALPIDVKGETFSRVFGINTALFEQFVLWKNIMGPCWLKFEDADFTAVNGASWC 511
Query: 549 KYEVQCNQMEKIRI 562
K E Q ++ + I +
Sbjct: 512 KLECQVSEPKLITV 525
>gi|261188006|ref|XP_002620420.1| DNA polymerase alpha catalytic subunit [Ajellomyces dermatitidis
SLH14081]
gi|239593431|gb|EEQ76012.1| DNA polymerase alpha catalytic subunit [Ajellomyces dermatitidis
SLH14081]
Length = 1458
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 263/698 (37%), Positives = 393/698 (56%), Gaps = 42/698 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE-ANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK GK ++ + E +
Sbjct: 775 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKYGGKQQQMSQANEEDEDGADK 834
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV P+KG YDK+I++MDFNSLYPSIIQE+NICFTT+ + +++
Sbjct: 835 KKKDKYKGGLVFPPEKGLYDKYILVMDFNSLYPSIIQEFNICFTTVDRAAVVENENEEKV 894
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P +Q GILP I LV RR+VK LMK S + L +D +Q ALKLTANSMYG
Sbjct: 895 PKVPSNQ-SPGILPRLIATLVNRRREVKKLMKDKRASPEDLALWDTKQMALKLTANSMYG 953
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+PLA L T+KGREIL +TK L EN +VIYGDTDS+MI+ N ++ +
Sbjct: 954 CLGYTQSRFYARPLAMLTTSKGREILRSTKELAENNQLQVIYGDTDSVMINTNTDNMEDA 1013
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ Y+ LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1014 LKVGNTFKRLVNERYQLLEIDIDSVFRRLLLHAKKKYAAMTMTEI-DGKYVDQLEVKGLD 1072
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++++IL + D L +H+++++I + +P+
Sbjct: 1073 MKRREYCALSKEVSSKLLNEILSGE-----DPDMVLTKVHDYLREITEKMKEYTIPVQKY 1127
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAATQ 977
I +L+K P+EY +++ +P QVALR K ++ D I+YI+ D +S +
Sbjct: 1128 VIYTKLSKRPDEYPNKETMPPAQVALR-ELARGKTVRPNDVIAYIVTTGDSDTSSLPPAK 1186
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K S LK DV YYL +QI P V RL P+ GTDAVR+AECLGLD Y+
Sbjct: 1187 RSYTLQDVMKPESGLKPDVEYYLLKQIFPPVERLCAPLPGTDAVRLAECLGLDVKKYQIN 1246
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEA---PTRLST-HGVV 1092
+ Q I + +F D T C + + E T + T +G++
Sbjct: 1247 TSSTRDQQNMEIFPLESQIPDSIRFKDAARLTLRCRFCHERTSFEGLCVSTEMCTANGLI 1306
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT------- 1145
C N C P+T + + +L + KYYEGWL C+D C + T
Sbjct: 1307 -----CPNSGCG-KPFTVI-SIAAQLESQIRAQTSKYYEGWLVCDDSSCGNRTRQMSVYG 1359
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSET 1205
RRC LG + R + + YT+ QLY QL +F + D+ KA ++ + E
Sbjct: 1360 RRC-LGPRGRAESCLGRMGFE--YTDKQLYNQLLYFARLWDVDKAKEIAEKETNAEKREK 1416
Query: 1206 YMGYCK--------MKQHVERFLESSAYNIVDLKKLFS 1235
M + +K V+ +L+ VD++ LF
Sbjct: 1417 IMAMVEWNRPRFETLKGVVDAYLKKCGRQWVDMEVLFG 1454
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 250/554 (45%), Gaps = 84/554 (15%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE + ++Y+E+ E+ Y + V KR +DD++ DD G+GY
Sbjct: 6 AKLAELRALRAAGKKRLTTYEVEDEGDIYDEIDEEGYKKLVRKRLDQDDFVIDDTGEGYA 65
Query: 116 EDGREIFDD--------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK-- 165
+DGRE ++D D +++P + + ++++ + I K P K
Sbjct: 66 DDGREEWNDSKQYYSDSDGDELPLRGKAAKRKREEDQQRKEKINNGISKYFNTGPAAKAP 125
Query: 166 -KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K K ++ LADLL EV++ P + V+PK K
Sbjct: 126 SKPKPVATAEDEAFLADLLEEVDSN--PVSR--------VLPK----------------K 159
Query: 225 PIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMN-----VAEQSKEEPVDDGLWEQMQI 279
+K E + + ++ PL S + E N VA + + +P +D W
Sbjct: 160 AVKSETR--RKVRIISPPLSQNTTSEAAKDRKENNISSPLVASKVELDPDNDTTWLDAGD 217
Query: 280 DDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTS-------- 331
DD P VE +I EE+ ++ V ++ +++ +
Sbjct: 218 DDDVFMSDPAPSSPVTKAVERKIPKNIKVEEEEEDELMVVTQTTAHHDINGARINMTGKR 277
Query: 332 PPPQVVEKKEHKCAEWEAIQTEPSTSEPQ----VHSR--------TADD------SLPLA 373
P P+V E K A I+ P +P V S+ TAD + P A
Sbjct: 278 PTPKVKEPKYPSPATSSPIRANPDGIDPSSWNDVTSKLNVLSSPATADFKTFGKLAAPSA 337
Query: 374 TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
+ + +F F+LD E G++ LFGKV K+ + S V NI RK+Y LPR
Sbjct: 338 VEEDGSLLF--FWLDYVE----INGSLCLFGKVKNKDTGDYVSAFAKVDNILRKLYFLPR 391
Query: 434 SEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
++ T+E + + VY E D + ++ K+ K +++ +KYAF LP VP EYL++
Sbjct: 392 KYRVRHGHETEEEIDMEDVYKEVDALLSRTKVGTHKIKEVTRKYAFELPDVPKEGEYLKL 451
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWC 548
YS PALP D+ G+TFS VFG ++ E +L + I GP WL+F +A+ + SWC
Sbjct: 452 MYSYDKPALPIDVKGETFSRVFGINTALFEQFVLWKNIMGPCWLKFEDADFTAVNGASWC 511
Query: 549 KYEVQCNQMEKIRI 562
K E Q ++ + I +
Sbjct: 512 KLECQVSEPKLITV 525
>gi|171687046|ref|XP_001908464.1| hypothetical protein [Podospora anserina S mat+]
gi|170943484|emb|CAP69137.1| unnamed protein product [Podospora anserina S mat+]
Length = 1472
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 271/714 (37%), Positives = 399/714 (55%), Gaps = 70/714 (9%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKKEGEE-TGEANKG 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK+ G+ + E EE GEA K
Sbjct: 782 LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKEPFKGRARPEDEEDGGEAGK- 840
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQEYNICFTT+ L+D
Sbjct: 841 ---KKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEYNICFTTVDRTFLEDG---- 893
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+PE Q D G+LP I LV+ RRQVK+LMK + + L +DI+Q ALKLTANSM
Sbjct: 894 -VPQVPEKQ-DLGVLPRLIATLVDRRRQVKSLMKDKTATPEQLATWDIKQLALKLTANSM 951
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGRE+L +TK L E++ +VIYGDTDS+MI+ NV++
Sbjct: 952 YGCLGYTKSRFYARPLAVLTTFKGREVLRSTKDLAESMQLQVIYGDTDSVMINANVDNVA 1011
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
++G + K+ N YK+LE+DID +++ +LL KKKYAA+++ + ++GK + EIKG
Sbjct: 1012 DALRVGREFKAAVNGSYKKLEIDIDNIFRRILLQAKKKYAAVNLVE-TDGKYVEKMEIKG 1070
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E K ++ +IL + ++D +Q IH+++++I + + G V +
Sbjct: 1071 LDMKRREYCPLSREISKKLLDEIL-----SGNDIEDSVQKIHDYLREISSKMREGKVQIP 1125
Query: 919 LLEITKQLTKAPEEYT-DRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG--TSEAA 975
I QL K+P EY + +P +QVALR K +++GD +SYII D +SE
Sbjct: 1126 KYIILTQLGKSPTEYGQNGDTMPQIQVALR-EMARGKTMRKGDVVSYIITGDAKQSSEHF 1184
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY- 1033
+RAY ++ LK S+L DV +Y+ +QI P V RL I GT ++AE LGLD +
Sbjct: 1185 AKRAYTPQDVLKAGSELSPDVEWYIGKQIFPPVERLCANITGTSTSQLAENLGLDPRRFA 1244
Query: 1034 -----RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLST 1088
Q E + L ++V++ C + C +CK + E
Sbjct: 1245 NNNSNSGSGSAGGQDLEIHPLESQIPDQVRFADCKRLLLRCR--ACKGTSAFEG----LL 1298
Query: 1089 HGVVFVLDECIN-PECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR- 1146
V V + + P C T ++ ++ + + +YYEGWL C D C + TR
Sbjct: 1299 GSVEMVTPKGLACPSCSATLSTL--SIVAQVEAQVREQTSRYYEGWLVCGDADCGNRTRQ 1356
Query: 1147 ------RC--PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS 1198
RC P GL R C +++ + E +Y QL +F + D+ KA K+ + +
Sbjct: 1357 MSVYGDRCLGPKGL-GRDCMGRMRWE----FGERDMYNQLVYFASLFDVDKAKEKATSRA 1411
Query: 1199 IKFDS------ETYMGYCKMKQH-----------VERFLESSAYNIVDLKKLFS 1235
++ ET M +H V+R+L+ V + LF
Sbjct: 1412 TGGETGEVVTGETRERVMVMAEHNRVRFGTVKGVVDRYLDKCGRQWVAMDTLFG 1465
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 165/582 (28%), Positives = 277/582 (47%), Gaps = 67/582 (11%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGD 112
K +KFA + L++ G+ YE E++YEEV E +Y + V +R EDD++ DD G+
Sbjct: 7 KRDKFAELRALRE-SGKKKFDTYEVEEVEDLYEEVDENQYKKIVRQRLNEDDFVVDDNGE 65
Query: 113 GYVEDGRE-------IFDDDIED-VPQKKEKHDKRKKNKNIQNPNAKG-DIQKLLANMPV 163
GY +DGRE +D + ED V ++KE+ K+++++ +A +I +
Sbjct: 66 GYADDGREEWDRIPAAYDSESEDGVEERKERKSKKQRDEEKAKRDANDRNITEYFTKGAT 125
Query: 164 KKKKKEEVQLNNDD--VLADLLSEVNTTI-APTLKLNTKTNEIVIPKEEPPAPTAKEYLA 220
K + K +V DD LADLL EV+ + AP ++ + K + + A+E
Sbjct: 126 KTQPKPKVVKTEDDDKFLADLLGEVDANVPAPVVRSSKKRDRSAERRTTRALSPAREA-- 183
Query: 221 NFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQID 280
+P +KK+ PSP D E N +++EPV + M D
Sbjct: 184 --RQPAPKKKKVIDDRLSSPSPDYDM---------SEDNFLPPAEDEPV--AAPDVMMSD 230
Query: 281 DWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA-VELSTSPPPQVVEK 339
S V Q +V+ + E + E+ ++V + +V++A V +S S P + + K
Sbjct: 231 PPLPSSPAAKV--AQRRVQPKAVIEEEEEDEDMMEVAHTGAVTAASVNISASRPVKKIIK 288
Query: 340 KEHKCAEWEAIQTEP-STSEPQVHSRTADD-----SLPLATDHENKKVFRMFFLDAFE-- 391
E + AI + P +EP + + + + ++ + E + + ++ + DA E
Sbjct: 289 AEPLPSA--AITSSPMKAAEPAIDASSWNGLNQKLNVVGNSQAEARGIGKIDYKDAIEED 346
Query: 392 --------DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----T 439
D + G++ LFGKV K+ N H SC V + NI RK+Y LPR ++ T
Sbjct: 347 GSLNLFWTDYTEVNGSLCLFGKVLNKKTNHHVSCFVKIDNILRKLYFLPRKTRVQGKVDT 406
Query: 440 KEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALP 499
E V + VY+E D I T+ + +K + +KYAF LP VP +YL++ Y +
Sbjct: 407 GEEVEMMDVYNEVDAIMTKKNVGMYKIKACTRKYAFELPDVPKEGQYLKLLYPYTKAPID 466
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQM 557
+ +G+TFSHVFGT ++ E +L + IKGP WL+ +A+ F + S C+ EV +
Sbjct: 467 MNTTGETFSHVFGTNTALFEQFVLWKNIKGPCWLKIEDAD-FGALKNSSHCRLEVLVDHP 525
Query: 558 EKIRITNVCGNVLS----------RTLMGGRSERNEFLLLHA 589
+ NV + RT+ ++ + E L + A
Sbjct: 526 NMVAPFKDSENVEAPPLTLMSIALRTIFNAKANKQEILAISA 567
>gi|448089833|ref|XP_004196912.1| Piso0_004142 [Millerozyma farinosa CBS 7064]
gi|448094173|ref|XP_004197943.1| Piso0_004142 [Millerozyma farinosa CBS 7064]
gi|359378334|emb|CCE84593.1| Piso0_004142 [Millerozyma farinosa CBS 7064]
gi|359379365|emb|CCE83562.1| Piso0_004142 [Millerozyma farinosa CBS 7064]
Length = 1453
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 260/672 (38%), Positives = 376/672 (55%), Gaps = 51/672 (7%)
Query: 546 SWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YG 603
S +E+Q + K ++TN+ GN S TL G R+ RNEF+LLH F +Y++PD++ Y
Sbjct: 735 SEISFEIQILSLTK-QLTNLAGNAWSHTLSGTRAGRNEFILLHEFKRNNYIVPDREDRYQ 793
Query: 604 KNKKEGEET------GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQ 657
KN ++ EA KK Y GGLV EP+KG + +I++MDFNSLYPSIIQ
Sbjct: 794 KNSNNQQQAKLEANEDEATAVTSNKKPKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQ 853
Query: 658 EYNICFTTIP-----VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMK 712
E+NICFTT+ + + +D D+ +LP+ G+LP + LV RR+VK L+K
Sbjct: 854 EFNICFTTVDRDQYNLTLDEDRDLP----FLPDGDSSQGVLPRLLNTLVSRRREVKKLLK 909
Query: 713 QPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSL 772
P ++ QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L
Sbjct: 910 DPKITKSEKAQYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQL 969
Query: 773 VENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLL 832
E++ V+YGDTDS+MI V D KIG + K + N+ YK LE+DID V+K +LL
Sbjct: 970 AESIGLRVVYGDTDSVMIDTGVEDLKEAIKIGEEFKVQVNERYKLLEIDIDNVFKRLLLH 1029
Query: 833 KKKKYAALSIS-KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KKKYAA+++S + GK E+KG+D+ RR++ QL+ + +V+ +IL Q+ + +
Sbjct: 1030 AKKKYAAMNVSIDKTTGKEKTILEVKGLDMRRREYCQLSKDISTYVLEKIL-SQADPEQA 1088
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
L + + E KKIR N +P+ +I +L+K P Y + K +P VQ AL+L
Sbjct: 1089 LFSVYEYLEEEAKKIR----NNEIPVDKFKINTRLSKDPNNYPNGKTMPPVQAALKLRK- 1143
Query: 952 NSKKLKQGDTISYIIC----EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
K +K G I+Y+I ED +S A RA I+++ N KL+ D ++YL +QI V
Sbjct: 1144 QGKVIKAGSVITYVITAKASEDDSSSQA-DRAVPIQDVIRN-KLRPDPDFYLEKQIFAPV 1201
Query: 1008 TRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEF 1067
RLLE IEG + +RIAE LG+DT Y + S N G+ ++ D+ F
Sbjct: 1202 ERLLERIEGIEMIRIAEILGIDTRRY-------VINSRHNDSAGGDIVPIESSISDEERF 1254
Query: 1068 -----TCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDM 1122
+ CK + + V F +C P L L ++L +
Sbjct: 1255 RQASYLVLECKCKAKFRFGGIMASTDYQVTFNGIKCAKCGFTFP----LIKLTSQLEVAI 1310
Query: 1123 NKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYK----LHRVYTELQLYQQL 1178
K+I YY GWLKC+D C TR+ + + L + Y + Y++ LY QL
Sbjct: 1311 RKHISLYYCGWLKCDDASCGIETRQISVYGRRCLGASGKAYGCRGIMRYAYSDKALYNQL 1370
Query: 1179 SFFHYICDITKA 1190
+F I D+ KA
Sbjct: 1371 LYFDSIFDVNKA 1382
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 238/542 (43%), Gaps = 95/542 (17%)
Query: 61 FQKLKDLKGQGVK-HKYEFTADENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVE 116
+KL++ + G Y DE +Y+EV E Y E KRQE DD+I DD G+GYV+
Sbjct: 11 LKKLREARKAGSSVLTYSDDEDEQIYDEVDETTYREH--KRQEMMNDDFIVDDNGEGYVD 68
Query: 117 DGREIFDD--------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQ--KLLANMPVKKK 166
+G + +DD D E+ Q K++ +K K + Q KL + KK
Sbjct: 69 NGLDEWDDSTRPNYYSDEEEEAQGKKRKKTKKPVKIAKTAQISHYFQSSKLGGDSGANKK 128
Query: 167 KKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPI 226
K V N DD+L D + T+AP K ++ PK P + + S+P
Sbjct: 129 K---VDANIDDILVDF-EDKKPTVAPFGKKGSEKQNKTKPKNSNPF----SFSTSSSRPK 180
Query: 227 ------KVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQID 280
K +K E ++K PSP D D+V E NVAE+
Sbjct: 181 QKAAEQKPREKRESSLEKSPSPAIDNAPEIDTVDMAEDNVAEE----------------- 223
Query: 281 DWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKK 340
P KVE E KV+ + S S ++ + P+ V K
Sbjct: 224 ------------PNPVKVE---------DPEVKVEKEDASSDDSDEDVIVTRRPRAVGKN 262
Query: 341 EHKCAEWEA-----IQTEPSTSEPQV---HSRTADDSLPLATDHENKKVFRMFFLDAFED 392
+ + + I+T S+ P V ++ D S L D + F+MF+LD E
Sbjct: 263 RNNDVNFTSVNETKIKTNASSVTPSVPISYTEKYDASKVLGADQADDNTFKMFWLDYAE- 321
Query: 393 IYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK-----TKEPVSIAQ 447
T+ LFGKV K+ S I Q+I +++Y LPR L + EPV+
Sbjct: 322 ---VDNTLILFGKVPTKDGRVVSGVLQI-QDICKELYFLPRDYRLSDEADFSNEPVNPLD 377
Query: 448 VYSEFDQIATQYKILDFKSRKIEK-KYAFNLPGVPDLSEYLEVRYSAKCPA-----LPSD 501
V+ E + + LD K EK KYAF LPG+P EYL+V + P +PS+
Sbjct: 378 VHDEIVPLLLEKYGLDSIKAKPEKMKYAFELPGIPKEKEYLKVLLPFRTPKNRFVNIPSN 437
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQMEK 559
L G+TF HVFG + E+ +L+R I GP WLE A+ F S +S C+ EV + E+
Sbjct: 438 LEGETFKHVFGGNAGIFESFVLQRNIMGPCWLEVTGAD-FNSIKNVSHCQVEVAVSSPEQ 496
Query: 560 IR 561
I+
Sbjct: 497 IK 498
>gi|361131944|gb|EHL03559.1| putative DNA polymerase alpha catalytic subunit [Glarea lozoyensis
74030]
Length = 1354
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/672 (39%), Positives = 384/672 (57%), Gaps = 71/672 (10%)
Query: 537 EAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYV 596
EA+ F I+ +VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+
Sbjct: 677 EADTF--FIAALALKVQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYI 733
Query: 597 LPDKQYGKNKKEGEETGEANKGKG--RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPS 654
PDK K +++ EE + G +KK Y GGLV EP+KG YDKF+++MDFNSLYPS
Sbjct: 734 CPDKAVFKGRQQIEEENDEEGGAADVKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPS 793
Query: 655 IIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMK 712
IIQEYNICFTT+ L D + E +PE D GILP I LV RRQVK+LMK
Sbjct: 794 IIQEYNICFTTVDRTKLSDDE-----EQVPEVPEDQELGILPKLIATLVSRRRQVKSLMK 848
Query: 713 QPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSL 772
+ +++ L +DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L
Sbjct: 849 GKSATAEQLATWDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTYKGREILRSTKEL 908
Query: 773 VENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLL 832
E+ + +VIYGDTDS+MI+ NV++ D K+GN+ K N YK LE+DID V++ +LL
Sbjct: 909 AESNSLQVIYGDTDSVMINANVDNVDDALKVGNEFKKAVNDRYKLLEIDIDNVFRRILLQ 968
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KKKYAA+++ ++ +GK + E+KG+D+ RR++ L+ E V S++L+E D S
Sbjct: 969 AKKKYAAINLVQI-DGKFVDKMEVKGLDMKRREYCNLSKE----VSSKLLNEILSGDES- 1022
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D + IHE++++I T + +P I +L KAP++Y + ++P VQVALR +
Sbjct: 1023 DVVITRIHEYLREIATKMREDEIPTQKYTIYTKLGKAPKDYPNADSMPQVQVALR-EMSR 1081
Query: 953 SKKLKQGDTISYIICEDG--TSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTR 1009
K +++ D ++YI+ DG +SE +R+Y +++ K +S LK DV +YL +QI P V R
Sbjct: 1082 GKTVRKDDVMAYIVTGDGKNSSEPPAKRSYTPQDVGKADSGLKPDVEWYLYKQIFPPVER 1141
Query: 1010 LLEPIEGTDAVRIAECLGLDTSLY--RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEF 1067
+ G +T ++ SQI +S+ +F D
Sbjct: 1142 ITNNNSSG---------GNETEIHSLESQIDDSV------------------RFMDASRL 1174
Query: 1068 TCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINP--ECKVPPYTYLPHLINKLSQDMNKY 1125
+ +CK+ G+V + +C C+ ++ +L + K
Sbjct: 1175 SLRCRACKR--------NFDFEGLVESVGQCSQAGITCQCGQTLSTLSVVAQLEHQIRKQ 1226
Query: 1126 IVKYYEGWLKCEDPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQL 1178
KYYEGWL C+D C + TR RC LG K L C+ K+ Y+E +Y QL
Sbjct: 1227 TSKYYEGWLICDDQACGNRTRQMSVYGHRC-LGPKG-LAHGCYG-KMRYEYSEKMMYNQL 1283
Query: 1179 SFFHYICDITKA 1190
+F + D+ KA
Sbjct: 1284 LYFSSLFDVEKA 1295
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 222/538 (41%), Gaps = 94/538 (17%)
Query: 59 AAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVED 117
A F +L+ G K YE E++YEEV E Y + V +R +DD++ DD G+GY +D
Sbjct: 10 AKFAELRANVQSGKKRTYEVEQQEDLYEEVDEDGYKKVVRERLNQDDFVIDDNGEGYADD 69
Query: 118 GREIFD-------DDIEDVPQKKEK------------HDKRKKNKNIQNPNAKGDIQKLL 158
GRE +D + E++P K + K +K I N KG I
Sbjct: 70 GREEWDRQPGYGTESEEELPVKGKAGKAAKRKREEEKAKKENADKGISNYFTKGPITAQP 129
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIA-PTLKLNTKTNEIVIPKEEPPAPTAKE 217
PVK K++ DD +A LL EV+ + PT T ++ V PK A
Sbjct: 130 KAKPVKTKEE-------DDFMASLLGEVDDNVPRPT----THSSRRVQPKPRNRA----- 173
Query: 218 YLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQM 277
S + V++ + K K + + S +++N DG M
Sbjct: 174 ----LSPTLDVQRHVSKKRK--------SLDTRISTPPLDLNTG---------DGGDFIM 212
Query: 278 QIDD---WDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVS-SAVELSTSPP 333
+DD D+ Q + V + ++ ++A + + V E ++ S+V +S + P
Sbjct: 213 NMDDDTHLDDPQPSSPVARAVERKQVMVKAEDEDDDDMME-VAQAEGIATSSVNMSGTRP 271
Query: 334 PQVVEKKEHK-----------------CAEWEAIQTEPSTSEPQVHSRTADDSLPLATDH 376
++K E + W + + + + S T TD
Sbjct: 272 VPKIKKAEPYPSPASSSPVRGGAERVDASSWNDVTQKLNVMDSSQSSETVTFGKLDYTDA 331
Query: 377 -ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP--- 432
E + F+ D E G++ LFGKV K+N +H SC V V N+ RK++ LP
Sbjct: 332 IEEDGSLKFFWTDYTE----VNGSLCLFGKVKNKKNGAHVSCFVKVDNVLRKLFFLPREY 387
Query: 433 RSEHLK-TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY 491
R +++K T E V + +VY E D++ + ++ K + +KYAF VP EYL++ Y
Sbjct: 388 RQQNMKDTDEEVGMKEVYEEVDEMMGRMRVGMHKMKPCTRKYAFEHEDVPKEGEYLKLLY 447
Query: 492 ----SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKI-KGPSWLEFPEAEKFPSR 544
S A P L V K + E L + +I S + EK P R
Sbjct: 448 PYSNSDSMDAPPLTLMSIAMRTVLNVKDNKQEILAISARIYHDISLTDTTSPEKLPCR 505
>gi|344228706|gb|EGV60592.1| hypothetical protein CANTEDRAFT_96043 [Candida tenuis ATCC 10573]
Length = 1440
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 259/733 (35%), Positives = 402/733 (54%), Gaps = 74/733 (10%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKK 607
+ +Q + K ++TN+ GN S+TL G R+ RNE++LLH FH+ ++ PDK+ Y KN
Sbjct: 726 FSIQILSLSK-QLTNLAGNAWSQTLYGTRAGRNEYILLHEFHKNKFICPDKEDKYHKNTS 784
Query: 608 EGEET------GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
++ +A KK + GGLV EP+KG + I++MDFNSLYPSIIQE+NI
Sbjct: 785 YAQQARLESTEDDATNVTSNKKPKFQGGLVFEPEKGLHKNCILVMDFNSLYPSIIQEFNI 844
Query: 662 CFTTIP-----VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
CFTT+ + +D D+ +L PE+ + G+LP + LV RR+VK L+K P
Sbjct: 845 CFTTVERERYNITHDEDKDLPSL----PENDLQPGVLPKLLNTLVSRRREVKKLLKDPKN 900
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL 776
+ QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E++
Sbjct: 901 TPVERAQYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESI 960
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI V + K GN+ K++ N+ YK LE+DID YK +LL KKK
Sbjct: 961 GLRVVYGDTDSVMIDTGVTELKEAIKTGNEFKAKVNERYKILEIDIDNTYKAILLHAKKK 1020
Query: 837 YAALSIS-KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YAA+ IS GK + E+KG+D+ RR++ QL+ + F+++++L D +
Sbjct: 1021 YAAMDISFDKRTGKEVTKLEVKGLDMRRREYCQLSKDISTFILNKVL-----LDADSEKA 1075
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
L I+E+++++ + N +P+ +I +L+K P +Y + K++ VQVALR+ K
Sbjct: 1076 LSEIYEYLEQMANRIKNNEIPMDKFKINTKLSKDPTQYPNAKSMAQVQVALRMRE-QGKV 1134
Query: 956 LKQGDTISYII---CEDGTSEAATQRAYNIEELKNNSK-LKIDVNYYLSQQIHPVVTRLL 1011
+K G I+Y++ + + +A +RA + +E N + L+ D ++YL +QI V RLL
Sbjct: 1135 VKAGSVITYVVTAPVNESDTSSAVERARSFQETMNKAAGLRPDPSFYLEKQIFAPVERLL 1194
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKES-----IQQSEENILGVGEAEEVKYQFCDKFE 1066
E I+G D VR+A CL +DTS Y ++K I E +I G++E +++
Sbjct: 1195 ERIDGIDMVRVAGCLSIDTSKYILRVKNGDVLNDIAPIESSI---GDSE--RFRSASHLL 1249
Query: 1067 FTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLIN-KLSQDMNKY 1125
C + ++A +H +C+ YT+ IN +L + +
Sbjct: 1250 LKCKCGHQFRFGGIQA-----SHAYKITFKGIACNKCQ---YTFSALRINSQLETALRNH 1301
Query: 1126 IVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRV----YTELQLYQQLSFF 1181
I YY GWL C+D C TR+ + K + ++ Y V Y++ LY QL +F
Sbjct: 1302 ISTYYGGWLVCDDGACGITTRQISVYGKRCIGSSGKAYGCKGVMRYKYSDKALYNQLLYF 1361
Query: 1182 HYICDITKALTK---------------SDTPSIKFDSET-----YMGYCKMKQHVERFLE 1221
+ D+ KA +D P+ ++ T G C +Q V+++LE
Sbjct: 1362 DALFDVDKAKNNKLRPLYDGVEDGKVPADIPAATLNALTEQNRDLFGSC--QQVVQKYLE 1419
Query: 1222 SSAYNIVDLKKLF 1234
VD+ +F
Sbjct: 1420 DCGRRYVDMGSIF 1432
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 225/538 (41%), Gaps = 81/538 (15%)
Query: 55 TNKFAAFQKLKDLK-----GQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE---DDWI 106
++K A +KLK LK G+ V+ + +Y+EV E + R KR + DD+I
Sbjct: 3 SSKNARREKLKLLKQARELGRNVELSDQEEEAGGIYDEVDEDTF--RQHKRNQMMNDDFI 60
Query: 107 DDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANM----- 161
DD G+GYV++G + +DD E+ D K K + P AK + N
Sbjct: 61 VDDDGEGYVDNGADEWDDTTRPNYYSDEEEDVGSKRKRTKKP-AKVTKTSQINNFFKPKG 119
Query: 162 --PVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYL 219
K K + V+ + DD+L D P + + T+ + K P
Sbjct: 120 FEIASKPKPKVVEADIDDILNDFDDVAPAPKKPRVNVFGSTSSVNRNKPASRNP------ 173
Query: 220 ANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQI 279
F++P ++ EP+ D+ S + + MN S P+ + E
Sbjct: 174 --FNRPAATSRR------AEPTTASDD----SSDVTISMNDQPSS---PIKTAVQE---- 214
Query: 280 DDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEK 339
D D + D S + + V+ S + PQ+
Sbjct: 215 -DVDTFSKDTD----------------SIGDIDDESDEDDIIVARRPRASAANRPQISNI 257
Query: 340 KEHKCAEWEAIQTEPSTSEPQV-HSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPG 398
K AE + +TS P V + ++ D NK F+MF++D E
Sbjct: 258 SAMK-AERLSSPVRNTTSNPDVSYVDKLNEEEVFGGD--NKDSFKMFWMDHCE----VDN 310
Query: 399 TVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR-----SEHLKTKEPVSIAQVYSEF- 452
++ LFGKV + + S V + + R+++ LPR T++ VS V+ E
Sbjct: 311 SLILFGKVQTR-SGQFVSGAVQINGLTRELFFLPRKYRKVGGEDDTEDEVSPQDVHEEII 369
Query: 453 DQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP-----ALPSDLSGDTF 507
+ +YK+ +++ + KYAF L GVP S+YL+V K P +P+DL G+TF
Sbjct: 370 PLLLDKYKLDTIRAKPEKMKYAFELTGVPKESDYLKVLLPFKTPKNKHLIMPADLEGETF 429
Query: 508 SHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRIS-WCKYEVQCNQMEKIRITN 564
SHVFGT S+ E +++R I GP WLE + + R S C+ EV + I+ N
Sbjct: 430 SHVFGTNSNIFEAFVVQRNIMGPCWLEISKGDFNSIRNSTHCQVEVSVDSPNYIKPLN 487
>gi|254569452|ref|XP_002491836.1| Catalytic subunit of the DNA polymerase I alpha-primase complex
[Komagataella pastoris GS115]
gi|238031633|emb|CAY69556.1| Catalytic subunit of the DNA polymerase I alpha-primase complex
[Komagataella pastoris GS115]
gi|328351664|emb|CCA38063.1| DNA polymerase alpha subunit A [Komagataella pastoris CBS 7435]
Length = 1442
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/759 (34%), Positives = 406/759 (53%), Gaps = 73/759 (9%)
Query: 520 NLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRS 579
NLLL +G S ++ S + +Q + KI +TN+ GN S TL G R+
Sbjct: 712 NLLLTVAKEGASMVQI---------TSEITFRIQILSLSKI-LTNLAGNAWSHTLGGTRA 761
Query: 580 ERNEFLLLHAFHEKSYVLPDKQ-------YGKNKKEGEETGEANKGKGRKKAAYSGGLVL 632
RNEF+LLH F + Y++PDK+ + + + E E K +K + GGLV
Sbjct: 762 GRNEFILLHEFRKNGYIVPDKENFYQKHQQQQLQDQSPEDDETTKISSKKNNKFKGGLVF 821
Query: 633 EPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGI 692
EP+KG + ++++DFNSLYPSIIQE+NICFTT+ ++S +P G+
Sbjct: 822 EPEKGLHRNIVLVLDFNSLYPSIIQEFNICFTTVE----RESGNVDTIPPVPVQNSQQGV 877
Query: 693 LPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQ 752
LP + LV RR+VK L+K + Q+DI+Q+ALKLTANSMYGCLG+ NSRF+A+
Sbjct: 878 LPRLLANLVSRRREVKKLLKDSKIGPVEKAQFDIKQQALKLTANSMYGCLGYVNSRFYAR 937
Query: 753 PLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN 812
PLA LVT+KGREIL++T+ L E+L +V+YGDTDS+MI DY IG +K++ N
Sbjct: 938 PLAMLVTSKGREILMDTRQLAESLGLKVVYGDTDSVMIDSGTIDYQEAIAIGEDLKAKVN 997
Query: 813 KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASE 872
+ Y LE+DID V+K +LL KKKYAA+++S L NGKM+ E+KG+D+ RR++ QL+ E
Sbjct: 998 ERYSLLEIDIDNVFKRILLHAKKKYAAMNLS-LQNGKMVSQLEVKGLDMRRREYCQLSKE 1056
Query: 873 AGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEE 932
V+ QIL E D+ L +I+++++ + T + +P+T I +L+K P +
Sbjct: 1057 ISTHVLEQILGENDS-----DEALSDIYQYLETMGTKIRENSIPITKFNINTKLSKDPAQ 1111
Query: 933 YTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEE-LKNNSKL 991
Y + +P VQVALRL K +K G +S+I+ + + +RA + E L +L
Sbjct: 1112 YANAGGMPQVQVALRLRG-QGKVVKAGTVVSFIVTAGDDNLSVAERARPLAEVLATPEQL 1170
Query: 992 KIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY---RSQIKESIQQSEENI 1048
+ D +YYL +QI V RL+E +EG D VR+A+CLGLD+ Y R+Q ++ +
Sbjct: 1171 RPDPDYYLEKQIFAPVERLVERLEGVDLVRLAKCLGLDSGRYARIRTQYANGGANGDDLL 1230
Query: 1049 LG----VGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECK 1104
+ +AE +++ E TC +C S + V F +C + +
Sbjct: 1231 QPLESCISDAE--RFKEAATLELTC---TCGAHFAFGGIQESSYYTVTFSGIQCSSCGTQ 1285
Query: 1105 VPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCH--- 1161
+ + ++L + + +I YY GW++C+D C TR+ + K + T
Sbjct: 1286 LSSL----RVASQLERLIRHHISLYYAGWVECDDVSCGVHTRQVSVYGKRCIGNTGRSVG 1341
Query: 1162 -KYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTP-------SIKFDS-ETYMG---- 1208
K + VYT+ +LY QL + + D+ KA + P I+ DS ET G
Sbjct: 1342 CKGVISYVYTDRELYNQLLYLESLFDVDKARRQELRPLQDDTENRIRSDSGETKKGISQS 1401
Query: 1209 ------------YCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ + V+++ E VD+ LF+
Sbjct: 1402 TLDALAEQNRDTFGAFQSVVQKYFEQCGRRYVDMASLFN 1440
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK-TKEP 442
M++LD E +K + LFGKV + + S V V +DR+IY+LPRS H + P
Sbjct: 313 MYWLDYVEVNHK----LLLFGKVRTS-SGALVSAMVQVGGVDREIYILPRSSHRSDSSAP 367
Query: 443 VSIAQVYSEFDQIATQ-YKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP----- 496
V+ E + + Y + +++ + KYAF LPGVP ++YL++ P
Sbjct: 368 CGPMDVHEEITPLLLEKYGLKSIRAKPVTMKYAFELPGVPSEADYLKILLPHDTPLNADL 427
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCKYEVQCN 555
ALPS L G+TF VFG S+ E+ +L++ + GP WLE + R S C+ E+
Sbjct: 428 ALPSSLEGETFQRVFGGHSALFEDFVLQKDVMGPCWLEISNPDFDSMRNSSHCRVEMAIQ 487
Query: 556 QMEKIRI 562
+ I +
Sbjct: 488 SPKDITV 494
>gi|358053935|dbj|GAA99900.1| hypothetical protein E5Q_06603 [Mixia osmundae IAM 14324]
Length = 1500
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 268/709 (37%), Positives = 391/709 (55%), Gaps = 63/709 (8%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGG-RSERNEFLLLHAFHEKSYVLPDKQYGKNKKE 608
+EVQ + + ++TN+ GN RTL GG RSERNE++LLH FH Y++PDK G+ ++
Sbjct: 827 FEVQVLPLTQ-QLTNLSGNSWGRTLSGGSRSERNEYILLHEFHRLKYIVPDKFRGRVEEV 885
Query: 609 GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV 668
E+ Y GG V EPKKG +DK+II+MDFNSLYPSIIQEYNI FTT V
Sbjct: 886 KEK--------------YMGGKVFEPKKGLWDKYIIVMDFNSLYPSIIQEYNIDFTT--V 929
Query: 669 RMLQDSDITTLCEY---LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
+D + LP ++ G+LP I LV+ R+ VK LMK +++ MQYD
Sbjct: 930 DRSKDDGAKAGADSIPDLPSSDLEQGVLPKLIATLVQRRQLVKTLMKDRDVTPARYMQYD 989
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDT 785
IRQKALKLTANSMYGCLGF SRF+A+ LAAL T KGREIL NTK L E + +VIYGDT
Sbjct: 990 IRQKALKLTANSMYGCLGFAGSRFYARALAALTTYKGREILTNTKELAEGIQLDVIYGDT 1049
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
DS+MI+ NV D I + K N+ Y+ LE+D D V+ MLLL+KKKYAAL + +
Sbjct: 1050 DSVMINTNVTDLKEALLIASNFKKLINQRYRLLEIDTDAVFTRMLLLQKKKYAALKVEDM 1109
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+ G + E+KG+D RR++ +LA E + + I+ + S + ++ +HE++
Sbjct: 1110 TTGA--TALEVKGLDQRRREFCKLAKEVSENTLRFIMSGE-----STEVVVEKLHEYLAA 1162
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
+ ++ G PL I KQL+K + YT+ K +PHV VA R K D ++YI
Sbjct: 1163 VSDEVRAGLKPLEDFIINKQLSKELDAYTE-KNMPHVVVA-RRQKAKGYSAKAKDVVAYI 1220
Query: 966 IC--EDGTSEAATQ--RAYNIEELK---NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
C EDG+S Q RA + ++L+ K+D YYL Q+ PVV RL E IEG D
Sbjct: 1221 FCLGEDGSSAKTAQADRARHPDDLRQKEGKEAYKVDYGYYLFGQVLPVVERLCEHIEGAD 1280
Query: 1019 AVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVN 1078
R+A+CLG+D + ++ + E + L ++ +++ D C+ S
Sbjct: 1281 RQRLAQCLGIDLAQQKAHGMTDDVEREFHTLESQISDADRFRDADPLVMRCLYCS----- 1335
Query: 1079 TVEAP-TRLSTHGVVFVLDE---CINPECK--VPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
EAP L+++G + D C+N C +PP + + +L + I ++YEG
Sbjct: 1336 -TEAPFGGLASNGNGQISDAGLVCVNDACASVLPPAS----IAIQLELQVRARISQFYEG 1390
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALT 1192
WL C+D C + TR + K L C +H YT+ +LY QL +F + D +A
Sbjct: 1391 WLVCDDQECGNRTRMLAMYGKRCLQLGCRGI-MHNEYTDSRLYNQLLYFDTLFDGERA-- 1447
Query: 1193 KSDTPSIKFDSETYMG------YCKMKQHVERFLESSAYNIVDLKKLFS 1235
S +K D+ + + ++++ + R+++ V++ LFS
Sbjct: 1448 -SRNAPLKKDAIMVLARSNAVLFAELRKTLARYMDKCGRRYVNMSNLFS 1495
Score = 103 bits (256), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR-------S 434
++LD E + +P + L GKV+ S+ SCC+ + N+ R I+ LP+
Sbjct: 393 LHFYWLDYQEPPFPEP--LRLIGKVYDHATQSYVSCCLSIHNMMRNIFALPKIPVQAISD 450
Query: 435 EHLKTKEPVS-IAQVYSEFDQIATQ--YKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVR 490
++ +T+E + + V E +A + K F+ + + +KYAF VP + ++Y++
Sbjct: 451 DYEETEEELQRLTNVADELQALAVRSGVKATQFEYKFVNRKYAFEDDSVPREKTQYVKAM 510
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKY 550
Y P + + SG FSH+FGT++S E+ L+RK+KGP WLE AE +SWCK
Sbjct: 511 YPFTEPII-QETSGQFFSHLFGTRTSAFEHFALKRKLKGPCWLEIKNAELSDIAMSWCKL 569
Query: 551 EVQCNQMEKIR 561
EV C + + IR
Sbjct: 570 EVICKEPKDIR 580
>gi|295662386|ref|XP_002791747.1| DNA polymerase alpha catalytic subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279873|gb|EEH35439.1| DNA polymerase alpha catalytic subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1458
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 251/650 (38%), Positives = 374/650 (57%), Gaps = 34/650 (5%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE-ANKGKG 620
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK K ++ + E +
Sbjct: 775 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKYASKYQQMSQANEEDEDGTGK 834
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KK Y GGLV EP++G YDK+I++MDFNSLYPSIIQE+NICFTT+ ++ +++
Sbjct: 835 KKKDKYKGGLVFEPERGLYDKYILVMDFNSLYPSIIQEFNICFTTVDRALVAENENEEKV 894
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P Q GILP I LV RR+VK LMK S + L +D +Q ALKLTANSMYG
Sbjct: 895 PEVPTEQA-PGILPRLIATLVNRRREVKKLMKDKRASPEDLALWDTKQMALKLTANSMYG 953
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLG+ SRF+A+ LA L T+KGREIL +TK L E+ +VIYGDTDS+MI+ N ++ +
Sbjct: 954 CLGYTQSRFYARSLAMLTTSKGREILRSTKELAESNQLQVIYGDTDSVMINTNADNIEEA 1013
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K N+ YK LE+DID V++ +LL KKKYAA++++++ +GK + E+KG+D
Sbjct: 1014 LKVGNTFKRLVNERYKLLEIDIDNVFRRLLLHAKKKYAAINMTEV-DGKYVDQLEVKGLD 1072
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
+ RR++ L+ E ++++IL D L +H++++++ + +P+
Sbjct: 1073 MKRREYCALSKEVSSKLLNEILSGD-----DPDVVLTKVHDYLRELTEKMKELAIPVQKY 1127
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA---TQ 977
I +L+K P+EY +++ +P QVALR K ++ D ISYI+ ++ ++ +
Sbjct: 1128 VIYTKLSKGPDEYPNKETMPPAQVALR-ELARGKTVRPNDVISYIVTSGDSNTSSLPPAK 1186
Query: 978 RAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ 1036
R+Y +++ +K +S LK DV YYL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1187 RSYTLQDVIKPDSGLKPDVEYYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQIN 1246
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTR----LSTHGVV 1092
I + Q I + +F D T C + E + + +G+V
Sbjct: 1247 ISNTRDQQNMEIFPLESQIPDSIRFKDASRLTLRCRFCHERTFFEGLSSSAEMCTANGLV 1306
Query: 1093 FVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLT------- 1145
C N C P + ++ +L + KYYEGWL C+DP C + T
Sbjct: 1307 -----CPNTACGKP--FNIISIVAQLESQIRAQTAKYYEGWLVCDDPSCGNRTRQMSVYG 1359
Query: 1146 RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSD 1195
RRC LG + R + YTE QLY QL ++ + D+ KA +D
Sbjct: 1360 RRC-LGPRGRAEGCLGRMGFE--YTEKQLYNQLLYYARLWDVDKAKVAAD 1406
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE D ++Y+EV E+ Y + V KR +DD++ DD G+GY
Sbjct: 6 AKLAELRALRASGKKRLTTYEIEDDGDIYDEVDEEGYKKLVRKRLDQDDFVIDDAGEGYA 65
Query: 116 EDGREIFDD--------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK-- 165
+DGRE ++D D +++P K + ++++ + + I K P K
Sbjct: 66 DDGREEWNDSRRYYSDSDGDELPLKGKAAKRKREEDDQRKEKINNCISKYFNTGPAAKAT 125
Query: 166 -KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKT 200
K K ++ +ADLL EV+ P+ L K
Sbjct: 126 SKPKPVASAEDEAFMADLLGEVDANPLPSRALPKKA 161
>gi|255726188|ref|XP_002548020.1| DNA polymerase alpha catalytic subunit [Candida tropicalis MYA-3404]
gi|240133944|gb|EER33499.1| DNA polymerase alpha catalytic subunit [Candida tropicalis MYA-3404]
Length = 1473
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 255/660 (38%), Positives = 377/660 (57%), Gaps = 55/660 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--------YGKNKKEGEET 612
++TN+ GN S TL G R+ RNE++LLH F +Y++PDK+ Y + +
Sbjct: 767 QLTNIAGNAWSHTLSGTRAGRNEYILLHEFKRNNYIVPDKEDKTHKNTSYQQEARLENAE 826
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV-RML 671
+A KK Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+ R
Sbjct: 827 EDATTATSNKKPKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVDRDRFN 886
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
D LPE + G+LP + LV RR+VK L+K P + QYDI+Q+AL
Sbjct: 887 MTHDENKDMPILPEKESAPGVLPRLLNTLVSRRREVKKLLKDPKNTPFQKAQYDIKQQAL 946
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E+ + V+YGDTDS+MI
Sbjct: 947 KLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESSSLRVVYGDTDSVMID 1006
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS-KLSNGKM 850
N + KIG + K + N+ Y+ LE+DID V+K +LL KKKYAA++ S + G+
Sbjct: 1007 TGANSFKEAIKIGEEFKVQVNERYRLLEIDIDNVFKRLLLHAKKKYAAMNASIDRATGEE 1066
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
+ E+KG+D+ RR++ QL+ + +V+ +IL +D + L +++ ++++++ +
Sbjct: 1067 STTLEVKGLDMRRREYCQLSKDISTYVLMKIL-----SDSDPEAALIDVYNYLEEMKNKI 1121
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--- 967
N +P+ +I +L+K P+ Y + K++P VQVAL+L K +K G I+Y I
Sbjct: 1122 QNNEIPVDRYKINTKLSKDPKSYPNGKSMPQVQVALKLRE-QGKVIKAGSVITYAITAPQ 1180
Query: 968 --EDGTSEAATQRAYNIEEL--KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIA 1023
ED ++ A +RA +I+EL K N LK D YYL +QI V RLLE IEG D VR+A
Sbjct: 1181 NEEDKSTPA--ERARSIQELLSKKNPNLKPDPTYYLEKQIFAPVERLLERIEGIDMVRVA 1238
Query: 1024 ECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQV----NT 1079
LG+DT Y ++K S + + IL + + +F + +N C
Sbjct: 1239 SSLGIDTKRYILRVKNS-EGANGEILPMESSIPDSERFRTS-SYLVLNCKCGHSFRFGGI 1296
Query: 1080 VEAPT-RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCED 1138
+ +P +++ +GV E PE K L ++L + K+I YY GWL C+D
Sbjct: 1297 LASPDYKVTFNGVCCQKCEYTFPEIK---------LTSQLESMIRKHIALYYAGWLVCDD 1347
Query: 1139 PGCSDLTR-------RCPLGL--KTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
P C TR RC +G K C +Y+ Y++ QLY QL +F+ I D+ K
Sbjct: 1348 PACGITTRQISVYGKRC-IGASGKAMDCKGMMRYR----YSDKQLYNQLLYFNSIFDVDK 1402
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 19/210 (9%)
Query: 356 TSEPQVHSRTADDSLPLATD--HENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNS 413
T++P +H++ A+ + + D ++ F+MF+LD E ++ LFGK+ KE
Sbjct: 303 TAQP-IHAKFANHTEKVDEDIIRDSSDSFKMFWLDYSE----SDCSLLLFGKIMTKEGGL 357
Query: 414 HSSCCVIVQNIDRKIYLLPRSEHL-----KTKEPVSIAQVYSEFDQIA-TQYKILDFKSR 467
S V V+ + R++Y+LPR L E V+ A V E + + + YK+ +++
Sbjct: 358 ISGV-VKVEGLCRELYILPRDHPLVDGEEDQNETVTPADVLEEINPVLLSNYKLDSIRAK 416
Query: 468 KIEKKYAFNLPGVPDLSEYLEVR--YSAKCPA--LPSDLSGDTFSHVFGTKSSFLENLLL 523
KKYAF L +P +EYL+V +SA+ +PS++ G TF H+FGT ++ E +
Sbjct: 417 PERKKYAFELADIPKEAEYLKVLLPFSAETNKNIMPSNIEGRTFRHIFGTNTNMFEAFVT 476
Query: 524 ERKIKGPSWLEFPEAE-KFPSRISWCKYEV 552
+R I GP WLE + + S C+ EV
Sbjct: 477 QRNIMGPCWLEIKNGDFRAMQNASHCQAEV 506
>gi|391865026|gb|EIT74318.1| DNA polymerase alpha, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1460
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 252/650 (38%), Positives = 378/650 (58%), Gaps = 41/650 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK---EGEETGEANKG 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K +K + ++ + +
Sbjct: 774 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSAKLQKAEVKLQDGDDDDAT 833
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YD+F+++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 834 DKKKKDKYKGGLVFEPEKGLYDRFVLVMDFNSLYPSIIQEYNICFTTVERTATAENENEE 893
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 894 KVPEVPTSDQEQGILPRLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 953
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 954 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTLS 1013
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1014 DALKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAINMTEM-DGKYVDKLEVKG 1072
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L S D + L +H++++ + + VP+
Sbjct: 1073 LDMKRREYCALSKEVSQRLLNEVL---SGEDQEI--VLNRVHDYLRDLAGKMREFAVPVQ 1127
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAA 975
I +L+K PEEY +++ +P VQVALR K ++ D ISYI+ + +S A
Sbjct: 1128 KYVIYTKLSKRPEEYPNKETMPPVQVALR-ELARGKSVRPNDVISYIVTSGDSETSSLAP 1186
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y +++ +K +S L D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1187 AKRSYTLQDVMKPDSGLNPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQ 1246
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVE---APTRLSTH 1089
Q +I + + V+++ + TC SCK+ + E A + +
Sbjct: 1247 INTSSGGNQQNTDIFPLESQIPDSVRFETAARLTLTCR--SCKEKSVFEGLAASSHMCNA 1304
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR--- 1146
+F C N C+ +T L +I +L + KYYEGWL C+D C + TR
Sbjct: 1305 NGLF----CPNTACQ-KQFTVL-TIIAQLESQIRAQTSKYYEGWLVCDDSACGNRTRQMS 1358
Query: 1147 ----RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC LG + C Y+ Y+E QLY QL +F + D+ KA
Sbjct: 1359 VYGHRC-LGPRGHAEGCLGRMSYE----YSEKQLYNQLLYFAGLWDVDKA 1403
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 259/545 (47%), Gaps = 79/545 (14%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE +++YEEV ++ Y + + R EDD++ DD G+GY
Sbjct: 6 AKLAELRALRASGKKRISTYEVEEQDDIYEEVDDEGYKKIIRNRLDEDDFVVDDNGEGYA 65
Query: 116 EDGREIF-------DDDIEDVP------QKKEKHDKRKKNKNIQNPNAKGDIQKLLANMP 162
+DGRE + + D D+P ++K + DK++K K I N +K + A+ P
Sbjct: 66 DDGREDWTVDYHDSESDDGDLPANGKAAKRKREEDKQRKEK-INNGISKYFNKGSGASAP 124
Query: 163 VKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANF 222
K K ++ +ADLL EV+T N +N + PT +
Sbjct: 125 ---KPKPVATAEDEAFMADLLGEVDT--------NVVSNHV---------PTQNVIKSET 164
Query: 223 SKPIKVEKKIEKPIKKEPSPLKDEIKSNDS------VMEVEMNVAEQSKEEPVDDGLWEQ 276
+ ++V + P+ P P K + K +S + ++++ PV D +
Sbjct: 165 RRKVRV---LSPPLSHRPRPQKKQTKDENSDPMSPIGQKPDLDLDNDDGPLPVADD--DD 219
Query: 277 MQIDDWDNSQQTQDVLPEQAKVELQIEAI--ESQSIEEKVDVTNV-ESVSSAVELSTSPP 333
+ + D S + + + ++ E E + E +VT E+ +++V ++ S P
Sbjct: 220 VPMSDPMPSSPVSKAVERKTAIAVKTEDPDEEDNDLMEIAEVTGQHEAKTTSVNMAGSRP 279
Query: 334 PQVVEKKEHKC---------------AEWEAIQTEPST-SEPQVHSRTADDSLPLATDHE 377
P ++K+ + A W ++ + + S P +RT L E
Sbjct: 280 PPKIKKEAYTTPANSSPVKAMPDVANASWNDVRNKLNVLSSPASETRTFG-KLRAQDVVE 338
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
+ RMF++D F ++ G++ LFGKV K+ +++S V V NI RK+Y LPR
Sbjct: 339 DDGSLRMFWID-FTEVN---GSLCLFGKVRNKQTGNYASAFVKVDNILRKLYFLPREYRH 394
Query: 438 K----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
K T E V + VY+E D + ++ K+ K + +KYAF +PGVP +EYL++ Y
Sbjct: 395 KHGRDTDEEVDMEDVYNEVDGMMSRLKVGMHKIKPCTRKYAFEMPGVPKETEYLKLLYPY 454
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYE 551
PALP + G+TFSHVFGT +S E +L + I GP WL F E F + SWCK+E
Sbjct: 455 DKPALPMETKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLRF-EGADFSAVNNASWCKFE 513
Query: 552 VQCNQ 556
Q ++
Sbjct: 514 CQVSK 518
>gi|238493215|ref|XP_002377844.1| DNA polymerase alpha catalytic subunit, putative [Aspergillus flavus
NRRL3357]
gi|220696338|gb|EED52680.1| DNA polymerase alpha catalytic subunit, putative [Aspergillus flavus
NRRL3357]
Length = 1460
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 252/650 (38%), Positives = 378/650 (58%), Gaps = 41/650 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK---EGEETGEANKG 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K +K + ++ + +
Sbjct: 774 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSAKLQKAEVKLQDGDDDDAT 833
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YD+F+++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 834 DKKKKDKYKGGLVFEPEKGLYDRFVLVMDFNSLYPSIIQEYNICFTTVERTATAENENEE 893
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 894 KVPEVPTSDQEQGILPRLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 953
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 954 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTLS 1013
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1014 DALKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAINMTEM-DGKYVDKLEVKG 1072
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L S D + L +H++++ + + VP+
Sbjct: 1073 LDMKRREYCALSKEVSQRLLNEVL---SGEDQEI--VLNRVHDYLRDLAGKMREFAVPVQ 1127
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAA 975
I +L+K PEEY +++ +P VQVALR K ++ D ISYI+ + +S A
Sbjct: 1128 KYVIYTKLSKRPEEYPNKETMPPVQVALR-ELARGKSVRPNDVISYIVTSGDSETSSLAP 1186
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y +++ +K +S L D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1187 AKRSYTLQDVMKPDSGLNPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQ 1246
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVE---APTRLSTH 1089
Q +I + + V+++ + TC SCK+ + E A + +
Sbjct: 1247 INTSSGGNQQNTDIFPLESQIPDSVRFETAARLTLTCR--SCKEKSVFEGLAASSHMCNA 1304
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR--- 1146
+F C N C+ +T L +I +L + KYYEGWL C+D C + TR
Sbjct: 1305 NGLF----CPNTACQ-KQFTVL-TIIAQLESQIRAQTSKYYEGWLVCDDSACGNRTRQMS 1358
Query: 1147 ----RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC LG + C Y+ Y+E QLY QL +F + D+ KA
Sbjct: 1359 VYGHRC-LGPRGHAEGCLGRMSYE----YSEKQLYNQLLYFAGLWDVDKA 1403
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 259/545 (47%), Gaps = 79/545 (14%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE +++YEEV ++ Y + + R EDD++ DD G+GY
Sbjct: 6 AKLAELRALRASGKKRISTYEVEEQDDIYEEVDDEGYKKIIRNRLDEDDFVVDDNGEGYA 65
Query: 116 EDGREIF-------DDDIEDVP------QKKEKHDKRKKNKNIQNPNAKGDIQKLLANMP 162
+DGRE + + D D+P ++K + DK++K K I N +K + A+ P
Sbjct: 66 DDGREDWTVDYHDSESDDGDLPANGKAAKRKREEDKQRKEK-INNGISKYFNKGSGASAP 124
Query: 163 VKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANF 222
K K ++ +ADLL EV+T N +N + PT +
Sbjct: 125 ---KPKPVATAEDEAFMADLLGEVDT--------NVVSNHV---------PTQNVIKSET 164
Query: 223 SKPIKVEKKIEKPIKKEPSPLKDEIKSNDS------VMEVEMNVAEQSKEEPVDDGLWEQ 276
+ ++V + P+ P P K + K +S + ++++ PV D +
Sbjct: 165 RRKVRV---LSPPLSHRPRPQKKQTKDENSDPMSPIGQKPDLDLDNDDGPLPVADD--DD 219
Query: 277 MQIDDWDNSQQTQDVLPEQAKVELQIEAI--ESQSIEEKVDVTNV-ESVSSAVELSTSPP 333
+ + D S + + + ++ E E + E +VT E+ +++V ++ S P
Sbjct: 220 VPMSDPMPSSPVSKAVERKTAITVKTEDPDEEDNDLMEIAEVTGQHEAKTTSVNMAGSRP 279
Query: 334 PQVVEKKEHKC---------------AEWEAIQTEPST-SEPQVHSRTADDSLPLATDHE 377
P ++K+ + A W ++ + + S P +RT L E
Sbjct: 280 PPKIKKEAYTTPANSSPVKAMPDVANASWNDVRNKLNVLSSPASETRTFG-KLRAQDVVE 338
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
+ RMF++D F ++ G++ LFGKV K+ +++S V V NI RK+Y LPR
Sbjct: 339 DDGSLRMFWID-FTEVN---GSLCLFGKVRNKQTGNYASAFVKVDNILRKLYFLPREYRH 394
Query: 438 K----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
K T E V + VY+E D + ++ K+ K + +KYAF +PGVP +EYL++ Y
Sbjct: 395 KHGRDTDEEVDMEDVYNEVDGMMSRLKVGMHKIKPCTRKYAFEMPGVPKETEYLKLLYPY 454
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYE 551
PALP + G+TFSHVFGT +S E +L + I GP WL F E F + SWCK+E
Sbjct: 455 DKPALPMETKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLRF-EGADFSAVNNASWCKFE 513
Query: 552 VQCNQ 556
Q ++
Sbjct: 514 CQVSK 518
>gi|398405728|ref|XP_003854330.1| hypothetical protein MYCGRDRAFT_99627 [Zymoseptoria tritici IPO323]
gi|339474213|gb|EGP89306.1| hypothetical protein MYCGRDRAFT_99627 [Zymoseptoria tritici IPO323]
Length = 1478
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 273/728 (37%), Positives = 402/728 (55%), Gaps = 79/728 (10%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK---NKK-EGEETGEANK 617
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK +GK NKK E E E +
Sbjct: 769 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKVWGKGATNKKLEDNENVEGEE 828
Query: 618 GKGRKKAAYSGG-LVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
G KK G LV EP+KG YDKFI++MDFNSLYPSIIQEYNICFTTI L + D
Sbjct: 829 GADAKKKDKYKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEYNICFTTIERGHLTEED- 887
Query: 677 TTLCEYLPEHQVDT---GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKL 733
E +PE DT GILP IK LV RR+VK LMK + + D +D++Q+ALKL
Sbjct: 888 ----EKVPEVPDDTANKGILPRLIKTLVSRRREVKKLMKDKSATEDQRKTWDVKQQALKL 943
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN-YEVIYGDTDSLMISC 792
TANSMYGCLG+ SRF+A+PLAAL TAKGREIL +TK L E+ + VIYGDTDS+MI+
Sbjct: 944 TANSMYGCLGYTKSRFYARPLAALTTAKGREILQSTKDLAESAHALRVIYGDTDSVMINT 1003
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
N ++ K+G + + N+ Y+ LE++ID +++ +LL KKKYAA+++ + + I
Sbjct: 1004 NADNVLDALKMGKEFQKSVNERYELLEIEIDHIFRRLLLHAKKKYAAMTMVQKDDNTWIE 1063
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
++KG+D+ RR++ QL+ + + ++ +L + + + IH++++ + + N
Sbjct: 1064 KMDVKGLDMRRREYCQLSKDTSQALLDFLLSGE-----EPEKVVAQIHDYLRTLSEKMRN 1118
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED--G 970
+P I QL K P++Y + ++P VQVAL+ K++K D ++++IC + G
Sbjct: 1119 NEIPKHKYTIYTQLGKNPKDYPNGGSMPSVQVALK-RLAKGKQVKAKDVMAFVICGNSSG 1177
Query: 971 TSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
+E A + A++++E L +S L DV+YYL++QI P V RL PI GT+ +AECLGLD
Sbjct: 1178 VAENAAKNAHDLDEVLARDSPLVPDVDYYLAKQILPPVERLCAPIGGTNISLLAECLGLD 1237
Query: 1030 TSLYR--SQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCM----------------N 1071
TS YR S + S Q +E L + ++++ C+ C+ +
Sbjct: 1238 TSKYRVSSASRSSEQTNEITTLESQIPDHIRFKDCEPLHLLCLGCKHHFEFRGLSQPPPD 1297
Query: 1072 PSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYE 1131
PS +Q T P TH + C CK T L +L + + +YY
Sbjct: 1298 PSDEQPLT---PLAALTHDGL----ACPRSNCKSAISTLT--LSAQLEHQIRTHTSRYYS 1348
Query: 1132 GWLKCEDPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYI 1184
WL C+D C TR RC LG K L C ++ Y+E LY QL + +
Sbjct: 1349 AWLTCDDAACGARTRQMSVYGHRC-LGPKG-LAYGCSG-RMAFEYSEKALYNQLLYLQGL 1405
Query: 1185 CDITKALTKSDTPS--IKFDSET---------------YMGYCKMKQHVERFLESSAYNI 1227
D+ ++L K + +K + ET G C + V+++LE S +
Sbjct: 1406 FDVDRSLEKMENEKSLVKVEGETEKREKVKVMAGLNRERFGVC--RDVVKQYLERSGWGW 1463
Query: 1228 VDLKKLFS 1235
V + LF
Sbjct: 1464 VSMDSLFG 1471
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 156/545 (28%), Positives = 248/545 (45%), Gaps = 80/545 (14%)
Query: 55 TNKFAAFQKLKDLKGQG--VKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGG 111
+K A ++++ L+ G Y+ E++YE V ++ Y + V R ++DD++ DD G
Sbjct: 2 ASKADALKRIRALRAAGKTAFDDYKVEEAESIYETVDDEGYKKVVRSRLEQDDFVVDDNG 61
Query: 112 DGYVEDGRE--------IFDDDIEDVPQKKEKHDKRKKNKN---IQNPNAKGDIQKLLAN 160
+GY +DGRE ++D + ED K K KRK+ ++ I+ N KG I K
Sbjct: 62 EGYADDGREDWQDERQPMYDSESEDDRPKNSKAAKRKREEDADRIERQN-KG-INKYFNQ 119
Query: 161 MPVKKKKKEEVQ-LNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYL 219
P K + V+ +DD + +LL +V+T I + AP+
Sbjct: 120 KPTNAPKPKPVRTAEDDDFMNNLLGDVDTNI------------------QTRAPS----- 156
Query: 220 ANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQI 279
+ KP+K + + + PL+D ++ E S P++DG Q
Sbjct: 157 --YGKPVKSNDR--RKTRVLSPPLEDIERAAQRSRRTENEPPLPSA--PIEDGDTYMTQN 210
Query: 280 DDWDNSQQTQDVLPEQAKVELQIEAIESQSIE----------EKVDVTNVESVSSAVELS 329
DD D D +P V+ +E E +I+ E +VT + +AV +
Sbjct: 211 DDDD--MIMSDPMPSSPAVK-AVERKEHATIKAEEEEEEDLMEIAEVTGNAKLKTAVNIK 267
Query: 330 TSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTA----DDSLPLATD--HENKKVFR 383
S P + K K A + P+ TA D L + + E K+ +
Sbjct: 268 GSRPAPKLSKPVAKPAYPTPNSSSPTRGPADEVDMTAINRVTDQLNIMSSPAAETAKIGK 327
Query: 384 MFFLDAFED----------IYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
+ DA ED + G++ LFGKV +++ S S V V NI RK+Y LPR
Sbjct: 328 LDSQDAIEDDGSLRFFWTDYTEVNGSLCLFGKVKNRKDGSFVSAFVKVDNILRKLYFLPR 387
Query: 434 SEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
+ T E + VY E D I ++ K+ K ++ +KYAF LPG+P ++YL++
Sbjct: 388 ENRYRRGRETDEEIDFKDVYEEVDSIMSRQKVTMHKIKQSSRKYAFELPGIPREADYLKL 447
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWC 548
Y PAL DL+G+TFSHVFGT ++ E ++ + I GP WL+ A+ + SWC
Sbjct: 448 LYPYDKPALSMDLTGETFSHVFGTNTNLFEQFVMWKNIMGPCWLKIENADFNAVNNASWC 507
Query: 549 KYEVQ 553
K E+Q
Sbjct: 508 KLELQ 512
>gi|50552854|ref|XP_503837.1| YALI0E11869p [Yarrowia lipolytica]
gi|49649706|emb|CAG79430.1| YALI0E11869p [Yarrowia lipolytica CLIB122]
Length = 1375
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 263/703 (37%), Positives = 392/703 (55%), Gaps = 82/703 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN ++TL G RS RNE +LLH F + Y++PDK+ G+ NK
Sbjct: 727 QLTNLAGNAWNKTLAGTRSGRNESILLHEFTRQGYIIPDKEAGRG---------TNK--- 774
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R KA + GGLVL+P KG YD+ +++MDFNSLYPSIIQEYNICF+T+ + D I
Sbjct: 775 RGKAKFQGGLVLDPVKGLYDRHVLVMDFNSLYPSIIQEYNICFSTVDWASIPDDQIEPPA 834
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+ PE V+ GILP I+ LV+ RR+VK L+K P S+ Q+D++Q ALKLTANSMYG
Sbjct: 835 Q--PEPSVEQGILPRLIRTLVQRRREVKRLIKDPKASAAQKKQWDVKQMALKLTANSMYG 892
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLGF SRF+A+PLA L T+ GR+ L TK L E + +V+YGDTDS+MI+ N + Y
Sbjct: 893 CLGFEGSRFYAKPLANLTTSIGRDTLRATKELAEAESLQVVYGDTDSVMINTNTDTYKDA 952
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVD 860
K+GN K + N LYKQLE+DIDGV+ +LL KKKYAA ++ GK+ E+KG+D
Sbjct: 953 IKVGNDFKKKVNGLYKQLEIDIDGVFARLLLTNKKKYAARLATEEGMGKI----EVKGLD 1008
Query: 861 VVRRDWSQLASEAGKFVISQIL--DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFV--- 915
+ RR+ Q++ +A +V+ Q+L D+Q + L N+HE++ ++ L +G V
Sbjct: 1009 LRRRETCQISKDACTYVLEQVLGPDDQ-------ETALNNVHEYLFELAEKLRSGPVKDE 1061
Query: 916 ----PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
P+ I KQL K P+ Y + P V VALR + +++GD +S++I G+
Sbjct: 1062 SAPFPVEHYAILKQLGKDPKAY-NPPIQPFVAVALR-RLERGEVIREGDVMSFVITTVGS 1119
Query: 972 SEAATQRAYNIEELK-NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
E+A +A ++K + KL+ D YY+S+Q++P + RLL + GTD VR+ E LG+
Sbjct: 1120 DESA--KAQTTMDVKLSRGKLQPDAEYYISKQLYPQIERLLAHVTGTDPVRLGEVLGI-- 1175
Query: 1031 SLYRSQIKESIQQSEENIL------GVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
+IK++ Q E L + +AE +++ K E TC C E
Sbjct: 1176 -----EIKKAHQSHESRELLHPLESTISDAE--RFKDAVKLELTC---ECGHSFAYEGVK 1225
Query: 1085 RLST-HGVVFVLDECINPECKVPPYTYLP--HLINKLSQDMNKYIVKYYEGWLKCEDPGC 1141
+ +T HG+ I P C T P L +L + ++I KYYE W C D C
Sbjct: 1226 QNTTEHGI-------ICPSCS----TMFPLTRLCAQLETSIRRHISKYYETWYTCSDSAC 1274
Query: 1142 -------SDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS 1194
++ +RC +G R TC++ L Y + LY+QL +F + ++ KA ++
Sbjct: 1275 GIRTAQLTNFGKRC-MGSDGRF-NTCNRGTLDYEYNDQDLYRQLLYFDTLFNMDKAAQEN 1332
Query: 1195 DTPS--IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
D + + +Q V+++L+ S VD+ +F
Sbjct: 1333 DKDMKLAVLAGQNRERFVYPRQVVDKYLKDSGRAFVDMAAIFG 1375
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 138/563 (24%), Positives = 247/563 (43%), Gaps = 93/563 (16%)
Query: 71 GVKHKYEFTADENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDGREIFDDDIE 127
G K + F A E+VY+E+ E E+ + ++QE DD++ D G+GY + G ++D +
Sbjct: 16 GEKRELTFNA-EDVYDELDETEFKQH--RKQELLQDDFVVGDNGEGYADTGAYEWEDTGK 72
Query: 128 DVPQKKE----KHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLL 183
E K + KKN ++ N K + K LA+ PVK + DD + DL+
Sbjct: 73 RYGSSDEDGSPKSKRAKKNSDVIK-NRKLNF-KALASKPVKTETAASAVA--DDFMDDLI 128
Query: 184 SEVNTT---IAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEK----KIEKPI 236
+ + A K + + KEE +Y + + P V +I +
Sbjct: 129 GVIGGSGPKSADKKKPMNRKSRSARAKEEEDVFVDMDYSYDMASPEHVSSSPPAEIVHAV 188
Query: 237 KKEPSPLKDEIKSNDSVMEVEM---NVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLP 293
++E + D + D M+++M ++ + + DD E + + ++
Sbjct: 189 REE--AIADGMDFADD-MDIDMGEPDIPNKVPQSESDDDEDEVVVRPKAGQAAAAVNMRG 245
Query: 294 EQAKVELQIEAIESQSIEEKVDVTNVE------SVSSAVELSTSPPPQVVEKKEHKCAEW 347
++ V ++ E ++++ +++++ ++E ++S ++L+TS + A+
Sbjct: 246 QKPVVAVKKEIVKTEPVKKELVKEDIEEPELVPDITSNIQLATS---------KAGSADT 296
Query: 348 EAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVF 407
I EP+ T + K F+ F+++ I + T+YLFGK
Sbjct: 297 AKISVEPNE----------------VTTEDGK--FKFFWME--HAIVRD--TLYLFGKTM 334
Query: 408 V---KENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDF 464
V K SC + V + R++++LP++E S + V+ E D I + + +
Sbjct: 335 VLTGKNKGQFVSCLIKVASTQRQMFVLPKNE-------CSTSDVHEELDGI-MEARGIRM 386
Query: 465 KSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLE 524
+++ + KKY F+LPGVP +EYLEV YS SG TFSHVFG S E +L
Sbjct: 387 RAKPVTKKYCFHLPGVPAEAEYLEVLYSPPKEKFDVPSSGATFSHVFGANQSLFEQFVLS 446
Query: 525 RKIKGPSWLEFPE---AEKFPSRISWCKYEVQCNQMEKIRITNVCGN------------V 569
++ GP W++ E A RIS E+ KI +VC N +
Sbjct: 447 HQVMGPCWMQIDEPDFASAGQGRISHTGIEITAKSSAKI---SVCSNQEAPMPPISMISL 503
Query: 570 LSRTLMGGRSERNEFLLLHAFHE 592
RT+ G+S+ + L F +
Sbjct: 504 AVRTMTEGKSQSVVAVTLRMFQD 526
>gi|317157024|ref|XP_001826175.2| DNA polymerase alpha catalytic subunit [Aspergillus oryzae RIB40]
Length = 1939
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 257/702 (36%), Positives = 395/702 (56%), Gaps = 49/702 (6%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK---EGEETGEANKG 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K +K + ++ + +
Sbjct: 1253 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSAKLQKAEVKLQDGDDDDAT 1312
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YD+F+++MDFNSLYPSIIQEYNICFTT+ +++
Sbjct: 1313 DKKKKDKYKGGLVFEPEKGLYDRFVLVMDFNSLYPSIIQEYNICFTTVERTATAENENEE 1372
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+P + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 1373 KVPEVPTSDQEQGILPRLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 1432
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 1433 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTLS 1492
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1493 DALKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAINMTEM-DGKYVDKLEVKG 1551
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L + + L +H++++ + + VP+
Sbjct: 1552 LDMKRREYCALSKEVSQRLLNEVLSGEDQ-----EIVLNRVHDYLRDLAGKMREFAVPVQ 1606
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAA 975
I +L+K PEEY +++ +P VQVALR K ++ D ISYI+ + +S A
Sbjct: 1607 KYVIYTKLSKRPEEYPNKETMPPVQVALR-ELARGKSVRPNDVISYIVTSGDSETSSLAP 1665
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y +++ +K +S L D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1666 AKRSYTLQDVMKPDSGLNPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQ 1725
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVE---APTRLSTH 1089
Q +I + + V+++ + TC SCK+ + E A + +
Sbjct: 1726 INTSSGGNQQNTDIFPLESQIPDSVRFETAARLTLTCR--SCKEKSVFEGLAASSHMCNA 1783
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR--- 1146
+F C N C+ +T L +I +L + KYYEGWL C+D C + TR
Sbjct: 1784 NGLF----CPNTACQ-KQFTVL-TIIAQLESQIRAQTSKYYEGWLVCDDSACGNRTRQMS 1837
Query: 1147 ----RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS-- 1198
RC LG + C Y+ Y+E QLY QL +F + D+ KA ++ +
Sbjct: 1838 VYGHRC-LGPRGHAEGCLGRMSYE----YSEKQLYNQLLYFAGLWDVDKARVAAEKEASG 1892
Query: 1199 ------IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ S + +K V+ +L+ V++ LF
Sbjct: 1893 EKKDSVVALASFNRARFETVKGVVDAYLKKCGRQWVEMDSLF 1934
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 157/550 (28%), Positives = 258/550 (46%), Gaps = 89/550 (16%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE +++YEEV ++ Y + + R EDD++ DD G+GY
Sbjct: 485 AKLAELRALRASGKKRISTYEVEEQDDIYEEVDDEGYKKIIRNRLDEDDFVVDDNGEGYA 544
Query: 116 EDGREIFDDDIED-------------VPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMP 162
+DGRE + D D ++K + DK++K K I N +K + A+ P
Sbjct: 545 DDGREDWTVDYHDSESDDGDLPANGKAAKRKREEDKQRKEK-INNGISKYFNKGSGASAP 603
Query: 163 VKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANF 222
K K ++ +ADLL EV+T N +N + PT +
Sbjct: 604 ---KPKPVATAEDEAFMADLLGEVDT--------NVVSNHV---------PTQNVIKSET 643
Query: 223 SKPIKVEKKIEKPIKKEPSPLKDEIKSNDS------VMEVEMNVAEQSKEEPVDDGLWEQ 276
+ ++V + P+ P P K + K +S + ++++ PV D +
Sbjct: 644 RRKVRV---LSPPLSHRPRPQKKQTKDENSDPMSPIGQKPDLDLDNDDGPLPVADD--DD 698
Query: 277 MQIDDWDNSQQTQDVLPEQAKVELQIEAI--ESQSIEEKVDVTNV-ESVSSAVELSTSPP 333
+ + D S + + + ++ E E + E +VT E+ +++V ++ S P
Sbjct: 699 VPMSDPMPSSPVSKAVERKTAITVKTEDPDEEDNDLMEIAEVTGQHEAKTTSVNMAGSRP 758
Query: 334 PQVVEKKEHKC---------------AEWEAIQTEPST-SEPQVHSRT-----ADDSLPL 372
P ++K+ + A W ++ + + S P +RT A D +
Sbjct: 759 PPKIKKEAYTTPANSSPVKAMPDVANASWNDVRNKLNVLSSPASETRTFGKLRAQDVV-- 816
Query: 373 ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
E+ RMF++D F ++ G++ LFGKV K+ +++S V V NI RK+Y LP
Sbjct: 817 ----EDDGSLRMFWID-FTEVN---GSLCLFGKVRNKQTGNYASAFVKVDNILRKLYFLP 868
Query: 433 RSEHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
R K T E V + VY+E D + ++ K+ K + +KYAF +PGVP +EYL+
Sbjct: 869 REYRHKHGRDTDEEVDMEDVYNEVDGMMSRLKVGMHKIKPCTRKYAFEMPGVPKETEYLK 928
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RIS 546
+ Y PALP + G+TFSHVFGT +S E +L + I GP WL F E F + S
Sbjct: 929 LLYPYDKPALPMETKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLRF-EGADFSAVNNAS 987
Query: 547 WCKYEVQCNQ 556
WCK+E Q ++
Sbjct: 988 WCKFECQVSK 997
>gi|344301322|gb|EGW31634.1| hypothetical protein SPAPADRAFT_51626 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1445
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 254/676 (37%), Positives = 382/676 (56%), Gaps = 67/676 (9%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKK 607
+ +Q + K ++TN+ GN S TL G R+ RNE++L+H F +Y++PDKQ KN
Sbjct: 731 FAIQILSLSK-QLTNIAGNAWSHTLSGTRAGRNEYILVHEFKRNNYIVPDKQDQTHKNTS 789
Query: 608 EGEET------GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
+E +A KK Y GGLV EP+KG + +I++MDFNSLYPSIIQE+NI
Sbjct: 790 YNQEARLENIDDDATTATSNKKPKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEFNI 849
Query: 662 CFTTIP-----VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
CFTT+ V +D D+ L PE + + G+LP + LV RR+VK L+K P
Sbjct: 850 CFTTVDRDRFNVSHDEDRDLPVL----PERESEPGVLPRLLNTLVSRRREVKKLLKDPKN 905
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL 776
+ QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E+
Sbjct: 906 TPFQRAQYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESS 965
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI +++ K+G + K + N+ Y+ LE+DID V+K +LL KKK
Sbjct: 966 GLRVVYGDTDSVMIDTGADNFQHALKVGEEFKIQVNERYRLLEIDIDNVFKRLLLHAKKK 1025
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YAA+++S + NG S E+KG+D+ RR++ QL+ + FV+ +IL ++ + L
Sbjct: 1026 YAAMNVS-IKNGVESTSLEVKGLDMRRREYCQLSKDISTFVLMKIL-----SNMDPEQAL 1079
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
I+++++ + + + + + +I +L+K P Y + K++P VQVALRL K +
Sbjct: 1080 SEIYDYLEDQKNKIISNEILMDKFKINTRLSKDPANYPNGKSMPQVQVALRLRK-QGKVI 1138
Query: 957 KQGDTISYII---CEDGTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
K G+ ++Y+I +D A++RA +I+E + N K K D YYL +QI V RLLE
Sbjct: 1139 KAGNVVTYVITSPADDSDKSTASERARSIQEVITNKDKYKPDAMYYLEKQIFAPVERLLE 1198
Query: 1013 PIEGTDAVRIAECLGLDTSLYRSQIKES------IQQSEENILGVGEAEEVKYQFCDKFE 1066
IEG D +R+A LG+DT Y +++ S I E NI ++ +++
Sbjct: 1199 RIEGVDMMRVATSLGIDTKKYILRVRNSDGPNGEIAPLESNI-----SDSERFRQSSYLV 1253
Query: 1067 FTCMNPSCKQVNTVEAPT--RLSTHGVVFVLDECINPECKVPPYTY-LPHLINKLSQDMN 1123
C + + A ++S +GV C +T+ + L +L Q +
Sbjct: 1254 LKCKCGHSFRFGGIVASKDYKVSFNGVT----------CLKCDHTFSVLKLTAQLEQAIR 1303
Query: 1124 KYIVKYYEGWLKCEDPGCSDLT-------RRCPLGL--KTRLCTTCHKYKLHRVYTELQL 1174
+I YY GWL C+DP C +T RRC +G K C +Y+ Y++ L
Sbjct: 1304 HHIALYYSGWLICDDPACGIMTRQISVYGRRC-IGSSGKAMDCKGVMRYR----YSDKAL 1358
Query: 1175 YQQLSFFHYICDITKA 1190
Y QL +F I +I KA
Sbjct: 1359 YNQLLYFDSIFNIDKA 1374
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 25/246 (10%)
Query: 334 PQVVEKKEHKCAEWEAIQTEPSTSEPQV----HSRTADDSLPLATDHENKKVFRMFFLDA 389
P+ +H +++ + TS P H+ D+S+ + D E+ F+MF+LD
Sbjct: 252 PRASATHKHTIKTVSSVKADEFTSSPTTLFANHTDKLDESIIM--DTESTDSFKMFWLDY 309
Query: 390 FEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE-----PVS 444
E T+ LFGK+ K+ +S V V + R++Y LPR ++ E PV
Sbjct: 310 CE----VDNTLLLFGKILTKDGKL-ASGVVQVNGLCRELYFLPRKYRMENGEENEDEPVG 364
Query: 445 IAQVYSEFDQIAT-QYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP-----AL 498
V E I QY + + K++ KYAF L +P +EYL+V K P +
Sbjct: 365 PLDVLDELTPILLEQYNLQELKAKPETMKYAFELAEIPKETEYLKVLLPFKTPKNQHMIM 424
Query: 499 PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQ 556
P+++ G+TF+HVFGT + E + +R + GP WL E F S S C+ EV +
Sbjct: 425 PANIEGETFNHVFGTNQNIFEAFVTQRNVMGPCWLTI-EGGDFHSIQNTSHCQVEVAVDS 483
Query: 557 MEKIRI 562
+I +
Sbjct: 484 PSQISV 489
>gi|296412426|ref|XP_002835925.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629722|emb|CAZ80082.1| unnamed protein product [Tuber melanosporum]
Length = 1451
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 271/711 (38%), Positives = 386/711 (54%), Gaps = 80/711 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN +RT+ G R+ERNE++LLH F+ Y+ PDK YGK G T +A+
Sbjct: 780 QLTNLAGNSWARTMSGTRAERNEYILLHEFYRNKYICPDKVYGK----GNTTQKADGAGN 835
Query: 621 ---------RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML 671
+KK Y GGLV EP+KG YDKFI++MDFNSLYPSIIQE+NICFTT+
Sbjct: 836 EGENEGGGVKKKEKYKGGLVFEPEKGLYDKFILVMDFNSLYPSIIQEFNICFTTVK---- 891
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+D +PE QV GILP I LV+ RR VK LMK + Q+DI+Q+AL
Sbjct: 892 RDDSGEEKVPDVPETQV-LGILPRLISTLVQRRRIVKNLMKDKTATDVQKSQWDIKQQAL 950
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLG+P SRF+A+PLA L T KGREIL +TK L E ++ +VIYGDTDS+MI+
Sbjct: 951 KLTANSMYGCLGYPRSRFYARPLAMLTTHKGREILRSTKELAEAIDLQVIYGDTDSVMIN 1010
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
V++Y KIG K + N+ YK LE+DID V++ +LL KKKYAA++ ++ NGK+
Sbjct: 1011 TGVDNYADAIKIGTDFKRKVNEQYKLLEIDIDNVFQRLLLHAKKKYAAINYVEI-NGKLA 1069
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR---LQNIHEHMKKIRT 908
E L+ +A ++++I +S DD ++ IHE+++ +
Sbjct: 1070 TKLE-------------LSKDASSHILAEI--------FSGDDTEVVVERIHEYLRGLAE 1108
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEY-TDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
+ PL I +L K+ +EY T + +P VQVALR N + +K GD +SY+I
Sbjct: 1109 KVRENAFPLMKYIIYTKLGKSLDEYGTSLQTMPQVQVALR-KNARGEPVKSGDVVSYVIT 1167
Query: 968 EDGTSEA----ATQRAYNIEE-LKNNSKLK-IDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
SEA + RAY ++ +K +S LK +D +YL +QI P + RL PIEGTDA+R
Sbjct: 1168 GGEGSEAPDKNVSDRAYAPQDIMKTDSGLKPVDAEWYLIKQIFPPIERLCGPIEGTDAMR 1227
Query: 1022 IAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVE 1081
+AECLGLDT Y QI + Q + I + + +F D +C + E
Sbjct: 1228 LAECLGLDTRKY--QITNAPDQEDRTIHPLESTLPDEERFKDAVRLQLQCRACGESFQFE 1285
Query: 1082 APTR----LSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCE 1137
S G+V C N C +P ++ ++ + + KYYE WL C+
Sbjct: 1286 GLILSYECCSHEGIV-----CRNASCN--KVLSVPSIVAQVECQIRQLTSKYYEAWLVCD 1338
Query: 1138 DPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
D C + TR RC LG RL C + YT+ LY QL +F + ++ KA
Sbjct: 1339 DAACGNRTRQMNVYGKRC-LG-PNRLADECRGVMGYE-YTDKMLYTQLLYFSSLFNVGKA 1395
Query: 1191 LTKSDTPSIKFDSETYMGYCKMKQH------VERFLESSAYNIVDLKKLFS 1235
K S K ++ T + + V+++L+ V + +F+
Sbjct: 1396 TAKPKDGSEKQETITALARTNQPRFEVISNVVQKYLDKCGRQWVSMDSIFA 1446
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 256/560 (45%), Gaps = 77/560 (13%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QE 102
R++R KT F++L++LK G Y+ +E+ Y+ V E+EY + V +R +
Sbjct: 3 RSRRAGAKKT-PHEGFKELRELKASGKTRLSGYKVEEEEDFYDLVDEEEYKKVVRQRLDQ 61
Query: 103 DDWIDDDGGDGYVEDG---------REIFDDDIEDVPQKKEKHDK--RKKNKNIQNPNAK 151
DD++ DD G+GY ++G RE ++ ED KK RK + + +
Sbjct: 62 DDFVVDDQGEGYADNGMDDWDDDHRREGSWEESEDERSKKGGRSAKARKAEEQKRKGEQE 121
Query: 152 GDIQKLL-ANMPVKKKKKEEVQLNNDDVLADLLSEV-NTTIAPTLKLNTKTNEIVIPKEE 209
G+I+K +N K K +V+ N + L DLL E N + A + L +K P+ +
Sbjct: 122 GNIRKFFNSNTAPTAKPKPKVKEENLNFLNDLLGEFDNDSPAEPISLMSKR-----PRGD 176
Query: 210 PPA------PTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVME-------- 255
P A P K+ SKP ++++ + + E SN +
Sbjct: 177 PVAKVRRLSPPLKD-----SKPTRMDQISQAGGEGEKPSFAGSSLSNAGNADNDDQDYGS 231
Query: 256 ----VEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIE-SQSI 310
V+M A P+ D + ++ + ++ +L + I+ S+SI
Sbjct: 232 FDEDVDMGDAPVVPSSPIADAV------------KRKRSKDEDEDDEDLSVARIQGSKSI 279
Query: 311 EEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAE---WEAIQT-EPSTSEPQVHSRTA 366
KV+ N+ + A++ T VV K + W + + TS P +
Sbjct: 280 --KVEAVNIIASRPALKSQTVKQEAVVPNKPVAAIDPTTWASFAGGDNVTSSPALDGSDL 337
Query: 367 DDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDR 426
+ P D E +MF+LD + +++ G++ LFGKV K++ + S + + I R
Sbjct: 338 EKLGP--EDVEEDGFIKMFWLD-YTEVH---GSLCLFGKVQDKKSGKYVSAFLKIDGILR 391
Query: 427 KIYLLPRSEH----LKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPD 482
+Y LPR L T E V++ V+ E +I + I FK++ ++YAF LPG+P
Sbjct: 392 NLYFLPRETRYKNKLDTGEIVAMQDVHDEIAEIMEHHGINFFKAKPSWRRYAFELPGIPK 451
Query: 483 LSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP 542
S+YL+V Y P +L+G TFS VFGT ++ E +L R I GP WL+ E F
Sbjct: 452 GSDYLKVLYPYTKPPFSHELTGQTFSCVFGTSTALFEQFVLCRNIMGPCWLKI-EGANFT 510
Query: 543 S--RISWCKYEVQCNQMEKI 560
+ SWCK E+Q + +++
Sbjct: 511 AVENSSWCKLEIQVAEPQQV 530
>gi|294658522|ref|XP_460862.2| DEHA2F11440p [Debaryomyces hansenii CBS767]
gi|202953194|emb|CAG89207.2| DEHA2F11440p [Debaryomyces hansenii CBS767]
Length = 1470
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/673 (37%), Positives = 381/673 (56%), Gaps = 59/673 (8%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKK 607
+ +Q + K ++TN+ GN S TL G R+ RNEF+LLH F +Y++PDK+ Y KN
Sbjct: 760 FSIQILSLSK-QLTNLAGNAWSHTLSGTRAGRNEFILLHEFKRNNYIVPDKEDKYHKNTN 818
Query: 608 EGEETG------EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
++ +A KK Y GGLV EP+KG + +I++MDFNSLYPSIIQEYNI
Sbjct: 819 HQQQAKLESNEEDATTATSNKKPKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEYNI 878
Query: 662 CFTTIP-----VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNL 716
CFTT+ + + D+ + P+ + G+LP + LV RR+VK L+K P
Sbjct: 879 CFTTVNRDNYNAAKIDEGDLPDI----PDREAAQGVLPRLLNALVSRRREVKKLLKDPKN 934
Query: 717 SSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL 776
++ QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E++
Sbjct: 935 TAIERAQYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESI 994
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI V+D+ KIG + K + N+ YK LE+DID V+K +LL KKK
Sbjct: 995 GLRVVYGDTDSVMIDTGVDDFKEAIKIGEEFKIQVNERYKLLEIDIDNVFKRLLLHAKKK 1054
Query: 837 YAALSIS-KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YAA++ S G+ I E+KG+D+ RR++ QL+ + FV+ +IL +D +
Sbjct: 1055 YAAMTTSIDRKTGQEIVKLEVKGLDMRRREYCQLSKDMSTFVLEKIL-----SDADPEQA 1109
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
L +++E+++ + + + + + +I +L+K P Y + K +P VQVALRL + K
Sbjct: 1110 LSDVYEYLEDMTRKIKDNEIQVDKFKINTRLSKDPNSYPNGKTMPPVQVALRL-RASGKV 1168
Query: 956 LKQGDTISYIIC----EDGTSEAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRL 1010
+K G I+YII ED + A +RA I+E+ N + LK D ++YL +QI V RL
Sbjct: 1169 IKAGSVITYIITAPASEDDKAPPA-ERARAIQEVLNKQANLKPDADFYLEKQIFAPVERL 1227
Query: 1011 LEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENI-LGVGEAEEVKYQFCDKFEFTC 1069
++ IEG D +RIA LG+DT Y ++K S + E + L ++ +++ C
Sbjct: 1228 VDRIEGVDMMRIASSLGIDTKKYVLRVKNSDATNGEILPLESNISDSERFRQSSYLVLEC 1287
Query: 1070 MNPSCKQVNTVEAPT--RLSTHGVVFVLDECINPECKVPPYTY-LPHLINKLSQDMNKYI 1126
S + + A +++ +G+ C YT+ + + ++ + +I
Sbjct: 1288 KCGSKFRFGGIMASDDYKVTFNGIC----------CSKCDYTFPVLRITAQVEYTLRNHI 1337
Query: 1127 VKYYEGWLKCEDPGCSDLT-------RRCPLGL--KTRLCTTCHKYKLHRVYTELQLYQQ 1177
YY GWL C+D C T RRC +G K C +YK Y++ LY Q
Sbjct: 1338 SLYYAGWLVCDDSACGITTRQISVYGRRC-IGTSGKAHGCKGVMRYK----YSDKALYNQ 1392
Query: 1178 LSFFHYICDITKA 1190
L + H + D+ KA
Sbjct: 1393 LLYLHSLFDVDKA 1405
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 235/556 (42%), Gaps = 104/556 (18%)
Query: 63 KLKDLK-----GQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGY 114
KLK+LK G + + D+ +Y+EV E+ Y ER KR + DD+I DD G+GY
Sbjct: 10 KLKELKEARQAGSSLITYSDGEDDQGIYDEVDEETYRER--KRNQMMNDDFIVDDNGEGY 67
Query: 115 VEDGREIFDDDIEDVPQKKEKHD--------------KRKKNKNIQNPNAKGDIQKLLAN 160
V++G + +DD E+ + K K I N G
Sbjct: 68 VDNGVDEWDDSTRPKYYSDEEEEGTGKKRKKNQKKPVKVAKTSEINNFFKSGGFTSSKVT 127
Query: 161 MPVKKKKKEEVQLNNDDVLADLLSEV------NTTIAPTLKLNTKTN------------E 202
P K + N DD+L D SEV +TT + + + KT
Sbjct: 128 APKK------IDANIDDILEDF-SEVKNGNKKSTTTSNSFGVQRKTANKKKSKQNAFSFS 180
Query: 203 IVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE 262
+ +++P ++S I ++ PIK+E + LK+EI N ME E NV
Sbjct: 181 TMSKRDKPKRIDELSSHDDYSMDIDASEQPSSPIKRESTNLKEEINVNG--MEKE-NVDP 237
Query: 263 QSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESV 322
Q K+E + + + QD E+ + + E I ++ + +
Sbjct: 238 QVKKEDTPENI-----------NGDVQDEDDEEIDDDSEDEVIVTRRPRAAAANKHKAAN 286
Query: 323 SSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHE-NKKV 381
SAV+ S P P + P+ H+ D+S L E +
Sbjct: 287 FSAVKASNVPSPS---------------PSRPTAHSLVSHTEKLDESKILQDSGEAGNES 331
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK--- 438
F+MF+LD E ++ LFGK+ ++ N S V V + R++Y LPR +
Sbjct: 332 FKMFWLDYCE----VDNSLLLFGKIQTRDGNLVSGV-VKVNGLCRELYFLPRKHRISNDE 386
Query: 439 --TKEPVSIAQVYSEFDQIATQ-YKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKC 495
T++ VS V+ E + + Y + K++ KYAF LPG+P EYL+V K
Sbjct: 387 EDTEDEVSALDVHEEVTPLLLEKYGLESIKAKPETMKYAFELPGIPKEGEYLKVLLPYKT 446
Query: 496 P-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLE-----FPEAEKFPSRI 545
P +PS+L G+TFSHVFGT ++ E L+ ++ I GP WLE F E +
Sbjct: 447 PRNRSLIIPSNLEGETFSHVFGTNANIFEALVSQQNIMGPCWLEISNGNFTEIQN----T 502
Query: 546 SWCKYEVQCNQMEKIR 561
S C+ EV + +R
Sbjct: 503 SHCQVEVAVSSPSFVR 518
>gi|353237576|emb|CCA69546.1| related to POL1-DNA-directed DNA polymerase alpha, 180 KD subunit
[Piriformospora indica DSM 11827]
Length = 1412
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 380/707 (53%), Gaps = 62/707 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET------GE 614
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK +GK + G
Sbjct: 745 QLTNIAGNSWNKTLNGGRAERNEYILLHEFHSLKYICPDKTWGKKAAAAAKVEAEEGDGA 804
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
A K K+ Y GGLV EPK+G +DK I++MDFNSLYPSIIQEYNI FTT+ +++S
Sbjct: 805 ATNTKS-KRDKYKGGLVFEPKRGLWDKIILVMDFNSLYPSIIQEYNIDFTTVETGQIEES 863
Query: 675 DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
+ +P+ + G+LP I LV+ R+ VK MK P + Q+DI+Q+ALKLT
Sbjct: 864 E--DQIPPVPDPSLAQGVLPRLIADLVKRRKAVKGYMKSPGSTEAERKQWDIKQQALKLT 921
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMY L +GREIL NTK L E++ +V+YGDTDS+ ++
Sbjct: 922 ANSMY----------------WLPWLRGREILTNTKQLAESMGLDVVYGDTDSVFVNSGH 965
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
D KI +Q K N Y+ LE+D+DGV++ +LLL+KKKYAA+ K+ N + +
Sbjct: 966 LDQTEALKIAHQFKKAVNDRYRLLEIDVDGVFQRLLLLQKKKYAAI---KVENN--VPTM 1020
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
E+KG+D+ RR++S L+ + V+ IL + + ++ IH+++ I ++ NG
Sbjct: 1021 EVKGLDMKRREYSALSKNTSRDVLGFILSGE-----ETEVVVEKIHDYLTAIGQNVRNGS 1075
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--EDGTS 972
V L I K+L K PE+Y D K PHVQVALR+ + K GD I YI C +DGTS
Sbjct: 1076 VQLDDYTIFKRLGKNPEDYPDAKTQPHVQVALRM-KAKGQSAKAGDVIPYIFCLADDGTS 1134
Query: 973 EAATQ--RAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
Q RA++ +++ ++ +LKID +YLSQQI P + RL +PIEGTD R+AECLGLD
Sbjct: 1135 SKTAQADRAFHPDDIRRSGGQLKIDFEHYLSQQILPPIERLCDPIEGTDRSRLAECLGLD 1194
Query: 1030 TSLYRSQIKESIQQSEE-NILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTR--- 1085
S Y + + L +++ +++ CD F TC CK P+
Sbjct: 1195 PSRYHAHSTGGGGEDRAFEALDSQKSDAQRFKSCDPFIVTCRK--CKSARAWHPPSSEDN 1252
Query: 1086 --LSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
++ GVV C C P L +L + +I +YY+GW+ C+D C +
Sbjct: 1253 ELVTGSGVV-----CATASCAAP--ITAASLQTQLEVQIRAHIGRYYDGWMVCDDEVCGN 1305
Query: 1144 LTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDS 1203
TR + K L C + ++ Y + QLY QL F+ + D K L S S +
Sbjct: 1306 RTRMMRVYGKRCLREGC-RGAMNPEYNDSQLYTQLLFYSSLFDSQKLLNSSKGSSRQEHI 1364
Query: 1204 ETYMG-----YCKMKQHVERFLESSAYNIVDLKKLFSCEEKQPKLSR 1245
+G + + VER L+ VDLK LF + + SR
Sbjct: 1365 TALVGQNADTLLVLAEVVERHLDECGRRWVDLKDLFGFMSIKGRGSR 1411
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE 441
RMF+LD E K VYL GKV K N + S CV ++NI+R +++LPR ++
Sbjct: 319 LRMFWLDYLEVDAK----VYLVGKVLDKSTNRYVSACVAIENIERNLFVLPRERRMEGDY 374
Query: 442 PVSIA----QVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDL-SEYLEVRYSAKCP 496
I V ++F + ++ I + +++KYAF PGVP + +++V Y P
Sbjct: 375 ETDIQPEKRDVQADFTEARQKFDIKRCAMKWVKRKYAFGEPGVPTQETLWMKVVYPFSEP 434
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEV 552
A+PS+L+ + +FGT +S E +++RKI GP WL+ AE SWCK E
Sbjct: 435 AMPSNLTSPNIARIFGTNTSAFELFVIKRKIMGPCWLQIKNAEIANKGASWCKLEA 490
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 55 TNKFAAFQKLKDLK----GQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDD 109
+ + A +L +L+ GQ +++ D ++Y+EVSE++Y V R +DD+++DD
Sbjct: 2 SGRTAQSHRLANLRNARQGQSRAKQWKPKGDASIYDEVSERDYEAIVRGRLDQDDFVEDD 61
Query: 110 GGDGYVEDGREIFDDDIEDVPQKKE 134
G DGY++ G + F+ D+ D ++E
Sbjct: 62 GVDGYIDHGMDDFEGDMADSEDERE 86
>gi|260941119|ref|XP_002614726.1| hypothetical protein CLUG_05504 [Clavispora lusitaniae ATCC 42720]
gi|238851912|gb|EEQ41376.1| hypothetical protein CLUG_05504 [Clavispora lusitaniae ATCC 42720]
Length = 1431
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/726 (36%), Positives = 391/726 (53%), Gaps = 84/726 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKKEGEET------ 612
++TN+ GN S TL G R+ RNEF+LLH F +Y++PDK+ + KN ++
Sbjct: 734 QLTNLAGNAWSHTLSGTRAGRNEFILLHEFRRNNYIVPDKEGKFHKNTSHQQDARIEATE 793
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+A KK Y GGLV EP+KG + +I++MDFNSLYPSIIQE+NICFTT+ +
Sbjct: 794 DDATTVTSNKKPKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEFNICFTTVE----R 849
Query: 673 DSDITTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
D+ TT E +PE D G+LP + LV RR+VK L+K P +S+ QYDI+
Sbjct: 850 DAYNTTHDEERDLPEIPERDSDQGVLPRLLNTLVSRRREVKKLLKDPKISAAERAQYDIK 909
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E++ V+YGDTDS
Sbjct: 910 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESIGLRVVYGDTDS 969
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS-KLS 846
+MI KIG + K + N+ YK LE+D D V+K +LL KKKYAA++++
Sbjct: 970 VMIDTGATSMAEALKIGEEFKVQVNERYKLLEIDTDNVFKRLLLHAKKKYAAMNVTLDRK 1029
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
GK I S E+KG+D+ RR++ L+ E FV+ ++L +D ++ L ++ +++
Sbjct: 1030 TGKEITSLEVKGLDMRRREYCSLSKEISTFVLEKLL-----SDIDPEEALSQVYGYLETT 1084
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
+ P+ I +L+K P Y + K +P VQVALRL K +K G I++II
Sbjct: 1085 SAKIRANEFPVDKYSINTRLSKDPTSYPNGKTMPPVQVALRLRK-QGKVVKAGSVITFII 1143
Query: 967 C---EDGTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
E S + +RA I+E L + + K D YYL +QI+ V RL+ IEG D +RI
Sbjct: 1144 TAPKEGEESASPAERARAIQEVLGDRTNFKPDSEYYLEKQIYAPVERLVNKIEGVDMLRI 1203
Query: 1023 AECLGLDTSLYRSQIKES------IQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ 1076
A LG+DT Y +++ + I E NI V + Y F TC + +
Sbjct: 1204 ASSLGIDTKKYAMRLRNTEGAEHEILPLESNISDVERFRQASY-----FVLTCKCGAKFR 1258
Query: 1077 VNTVEAPT--RLSTHGVVFVLDECINPECKVPPYTY-LPHLINKLSQDMNKYIVKYYEGW 1133
+ A +++ +GV C Y + + L ++L + K++ YY GW
Sbjct: 1259 FGGIMASKDYKVTFNGVC----------CAKCDYVFPVLRLTSQLEAAIRKHLSLYYAGW 1308
Query: 1134 LKCEDPGCSDLTR-------RCPLGL--KTRLCTTCHKYKLHRVYTELQLYQQLSFFHYI 1184
L C+D C TR RC +G K C YK Y++ LY QL +F I
Sbjct: 1309 LVCDDSACGIKTRQISVYGKRC-IGASGKAHGCKGVMSYK----YSDKALYNQLLYFDAI 1363
Query: 1185 CDITKA----------------LTKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIV 1228
D++KA +++ ++ ++ GYC ++ V+++L+ V
Sbjct: 1364 FDVSKAQKNQLRPIVYDVPVNPMSEGQLNALAEQNKVNFGYC--REVVDQYLKVCGRRYV 1421
Query: 1229 DLKKLF 1234
++ +F
Sbjct: 1422 NMGNIF 1427
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 145/587 (24%), Positives = 239/587 (40%), Gaps = 120/587 (20%)
Query: 47 AKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADEN--VYEEVSEKEYTERVLKRQE-- 102
A++ K+DK F+KL++ + G + + + DE+ +Y+EV E + R KR +
Sbjct: 3 ARKAKLDK------FKKLREARRTG---RIDASDDEDASIYDEVDEDTF--RQHKRDQLM 51
Query: 103 -DDWIDDDGGDGYVEDGREIFDDDIE-----DVPQKKEKHDKRKKNKNIQNPNAKGDIQK 156
DD+I DD G+GYV++G + +DD D + KR K + +I
Sbjct: 52 NDDFIVDDNGEGYVDNGVDEWDDATRPNYYSDEEAEAGPSRKRSKTHKVAKVTRTAEIDN 111
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK 216
A P + + D+L + +AP +++ +
Sbjct: 112 FFA--PAQTVSAPAAPKAPQASVDDILDDF---VAPKSRVSKN----------------R 150
Query: 217 EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQ 276
+ + +K E+ P +S S E A S +D
Sbjct: 151 AFTSFGRNQVKTERSA--------GPFG---RSRTSAPRKETKFASSSPSNTLD------ 193
Query: 277 MQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQV 336
+ D+D+ +D Q E ++ S T ES A L++SP PQ
Sbjct: 194 --MQDFDDFNTAED-----NGTNPQDETTDTPSTAATASSTQNESAKQA-SLASSPEPQA 245
Query: 337 VEKKEHK---------------CAEWEAIQTEPSTSEPQVHSRTADDSLPL--------A 373
E + A A++TE S P +S S+P A
Sbjct: 246 AESDSDEEVVVRRRAAAPARAHTASVTAVKTEAVVS-PSRNSLAFTSSVPSSQPKVELDA 304
Query: 374 TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
++K RMF+LD E G++ LFGKV E S S V V ++ R++Y+LPR
Sbjct: 305 VSSDDK--LRMFWLDYAE----ADGSLLLFGKVLTPEG-SLVSAMVQVHDMCRELYVLPR 357
Query: 434 SEHLKTKEPVSIAQVYSEFDQIAT-QYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYS 492
VS V++E I Q+ + +++ +KYAF LP VP +EYL+V
Sbjct: 358 DN-------VSPMDVHAELVPILMEQFGLERLRAKPETRKYAFELPDVPKEAEYLKVLLP 410
Query: 493 AKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP-SRIS 546
K +PS+L G+TF +FGT ++ E+ + +R I GP WL+ + P S
Sbjct: 411 FKTKKNQHVVMPSELEGETFRRIFGTNTNVFESFVTQRNIMGPCWLDIRTSGCSPLQNAS 470
Query: 547 WCKYEVQCNQMEKIR-ITN-------VCGNVLSRTLMGGRSERNEFL 585
C++E + E I +TN ++ +T+M ++ R E +
Sbjct: 471 HCQFEAAISSPECISPVTNGSPAPNLTTTSISVQTVMNVKANRQEVV 517
>gi|402079097|gb|EJT74362.1| DNA polymerase alpha catalytic subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1527
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 257/668 (38%), Positives = 379/668 (56%), Gaps = 63/668 (9%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK----EGEETGEANK 617
+TN+ GN +RTL G R+ERNE++LLH FH YV PDK + ++ + E+ EA
Sbjct: 816 LTNLAGNSWARTLTGTRAERNEYILLHEFHRSKYVCPDKPVFRGREARVVKEEDEDEAKA 875
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
G G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICFTT+ L D
Sbjct: 876 GGGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICFTTVDRSSLTAKDED 935
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
+ E +P +++ GILP I LV RRQVKALMK +++ L +D++Q+ALKLTANS
Sbjct: 936 EVPE-VPSAKLEQGILPRLIATLVSRRRQVKALMKDKTATAEELATWDVKQQALKLTANS 994
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
MYGCLGF SRF+A+PLA L T KGREIL +TK L E+ +VIYGDTDS+MI+ NV+ Y
Sbjct: 995 MYGCLGFDKSRFYARPLAVLTTYKGREILRSTKELAESNALQVIYGDTDSVMINANVDSY 1054
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
+ ++G K N+ Y+ LE+DID V++ +LL KKKYAA+++ ++ +G+++ E+K
Sbjct: 1055 AAARRVGIDFKRAVNERYRLLEIDIDNVFRRILLQAKKKYAAVNLIEV-DGRLVEKMEVK 1113
Query: 858 GVDVVRRDWSQLASEAGKFVISQIL--DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFV 915
G+D+ RR++ L+ E ++S+IL DE + + IHE+++ + + V
Sbjct: 1114 GLDMRRREYCALSKEVSAHILSEILSGDETEAS-------VARIHEYLRDMAARMRAATV 1166
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA 975
P + QL KAP EY + ++P VQVALR + K +++GD ISYI+ SE
Sbjct: 1167 PPQKYVVYTQLGKAPREYPNADSMPQVQVALR-DLAQGKTVRKGDVISYIVTTG--SEPV 1223
Query: 976 TQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+RAY + LK +S L DV++Y+++QI P V RL I GT ++AE +GLD Y
Sbjct: 1224 AKRAYTPTDVLKADSGLTPDVDWYMAKQIFPPVERLCANIVGTSTAQLAENMGLDPRRYA 1283
Query: 1035 SQIKESIQQS------EENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVE------- 1081
+ + Q + + + L +EV++ C + + C +CK V+T E
Sbjct: 1284 AGPSPAGQATGGADGLDIHPLESQLPDEVRFANCARLQLRCR--ACKLVSTFEGIGAADN 1341
Query: 1082 ---------------APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYI 1126
A ST V C + K+ P + ++ ++ +
Sbjct: 1342 EQKQQQDKQQPESDMASNSSSTIKVTASGMACGLCDAKLSPIS----VVAQVEHAVRSAT 1397
Query: 1127 VKYYEGWLKCEDPGCSDLT-------RRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLS 1179
+YYEGWL C+D C T RC LG K L C ++ ++E +Y QL
Sbjct: 1398 ARYYEGWLVCDDTSCGARTCQVSVYGTRC-LGPKG-LALDCQG-RMRYEFSERDIYNQLV 1454
Query: 1180 FFHYICDI 1187
+ + D+
Sbjct: 1455 YLASLFDV 1462
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 162/565 (28%), Positives = 247/565 (43%), Gaps = 90/565 (15%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGD 112
K KFA + L+ G+ YE +++YEEV E Y + V +R +DD++ DD G+
Sbjct: 9 KRTKFAELRALRQ-SGKKTFDAYEVEKVDSLYEEVDEDSYKKLVRERLNQDDFVVDDNGE 67
Query: 113 GYVEDGRE------IFDDDIED--VPQKKEKH------DKRKKNKNIQNPNAKG-DIQKL 157
GY +DGRE ++DD D P+K K KR ++++ +A DI +
Sbjct: 68 GYADDGREDWDRVPVYDDSESDGAAPRKTGKSAVAAVAGKRARDEDRAKRDANDRDISEY 127
Query: 158 LA-NMPVKKKKKEEVQLNNDD-VLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEP--PAP 213
+ P ++K + V+ +DD LADLL EV++ T + T K P P P
Sbjct: 128 FSKGAPKAQQKPKAVKTEDDDKFLADLLGEVDSNTRLTTHKSAATKPAERRKGRPLSPGP 187
Query: 214 TAKEYLANFSKPIKVEKKI--------------------EKPIKKEPSPLK--DEIKSND 251
+A++ +K + + P P+PL D++ +D
Sbjct: 188 SARQPRPKKAKTSDSRRALPPRATDNTALSDDEGFVPAPSSPGSPGPAPLAFDDDVLMSD 247
Query: 252 SVMEVEMNVAEQSK---EEPVDDGLW-----EQMQIDDWDN----------SQQTQDVLP 293
V A K +E + G E ++ DD D S
Sbjct: 248 PVPSSPAFKAAARKSLHQEGGESGHRTLIKKEVVEEDDEDTMEVSHAGAIASSSVNLAAS 307
Query: 294 EQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTE 353
+ AK L+ A E +E KV+ + VS+ EL +S Q+ + + E +
Sbjct: 308 KPAKKALKPPAPEPSRVESKVE----KDVSATEELDSSSWTQITQGLNVVSSLAEGV--- 360
Query: 354 PSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNS 413
P+ + D SL RMF+LD E + G++ LFGKV K+
Sbjct: 361 PAGKMDAADAVEEDGSL------------RMFWLDYAEVM----GSLCLFGKVLNKKTKL 404
Query: 414 HSSCCVIVQNIDRKIYLLPRSEHLKTKE-----PVSIAQVYSEFDQIATQYKILDFKSRK 468
++SC V V NI RK+Y LPR ++ E V + VY E D + T+ + K +
Sbjct: 405 YTSCFVKVDNILRKLYFLPRQFRVRQGEEHEDESVGMQDVYGEVDGLMTKMGVDMHKIKA 464
Query: 469 IEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIK 528
+KYAF LP VP +YL+ Y AL D +G+T+SHVFGT +S E +L + I
Sbjct: 465 CSRKYAFELPDVPREGQYLKCLYPYTKRALDGDQAGETYSHVFGTNTSLFEQFVLWKNIM 524
Query: 529 GPSWLEFPEAEKFPSR-ISWCKYEV 552
GP WL+ +A R S C+ EV
Sbjct: 525 GPCWLKIEDANFSAVRNASHCRLEV 549
>gi|213404058|ref|XP_002172801.1| DNA polymerase alpha catalytic subunit [Schizosaccharomyces japonicus
yFS275]
gi|212000848|gb|EEB06508.1| DNA polymerase alpha catalytic subunit [Schizosaccharomyces japonicus
yFS275]
Length = 1314
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 253/644 (39%), Positives = 361/644 (56%), Gaps = 30/644 (4%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
IS ++ Q Q+ K +TN+ GN SRTL G R+ERNE++LLH F + Y+LPDKQY
Sbjct: 650 ISALAFKTQILQLSK-NLTNIAGNSWSRTLTGTRAERNEYILLHEFKKNGYILPDKQYQN 708
Query: 605 NKK----EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYN 660
+++ + EET GK + K LV EPKKG YD +I++MDFNSLYPSIIQEYN
Sbjct: 709 SREVDVVDPEETPADTLGKKKDKYKGG--LVFEPKKGLYDTYILVMDFNSLYPSIIQEYN 766
Query: 661 ICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL 720
ICFTT+ + + + +P ++ GI P I LV R+Q+KAL+K N +
Sbjct: 767 ICFTTVHRKHCTSKNGADVVPDVPNSSLEQGIFPRLIANLVNRRKQIKALLKDKNATPVQ 826
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEV 780
+Q+DI+Q+ALKLTANSMYGCLG+ SRF+A+PLA LVT KGRE+L +TK L + + +V
Sbjct: 827 RLQWDIKQQALKLTANSMYGCLGYTKSRFYARPLAVLVTYKGREVLTSTKELADLMGLQV 886
Query: 781 IYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL 840
IYGDTDS+MI+ N N+ +IGN+ K+ N+ Y++LE+DID VY+ MLL KKKYAAL
Sbjct: 887 IYGDTDSVMINTNANNMTDALRIGNEFKNRVNERYRKLEIDIDNVYQRMLLHAKKKYAAL 946
Query: 841 SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
+ + GK + +IKG+D+ RR++ LA EA K+ + QIL + + + NIH
Sbjct: 947 QMD--AQGKPVL--DIKGLDMKRREFCALAKEASKYSLDQILSGE-----LTETVISNIH 997
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
++ + +G I +L KAPE Y + K +P VQVAL+ + ++ GD
Sbjct: 998 AYLVDFAQKMRSGKFSANKFIIFNKLGKAPESYPNGKTMPFVQVALK-KKARGENVRVGD 1056
Query: 961 TISYIICEDGTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
I +II + + RA + ++ + +S L ID YYLS QI P + RL+ P+EGTD
Sbjct: 1057 VIPFIITGNESQGHPADRAVSPQQVMDQSSNLTIDYEYYLSHQILPPLERLVAPVEGTDR 1116
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNT 1079
R+AECLGLD Y + E S + ++ ++ C P CK +
Sbjct: 1117 ARLAECLGLDPRKYYT--PEHADSSAFARIESTLTDDQRFSSARPLLLIC--PECKG-ES 1171
Query: 1080 VEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLIN-KLSQDMNKYIVKYYEGWLKCED 1138
T V+F N EC Y Y +N + + Y+ YYEG L C+D
Sbjct: 1172 FNMKTVAEIREVLFA----DNVECDC-GYEYSNLTVNLQFLGQLRNYLNHYYEGILVCDD 1226
Query: 1139 PGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFH 1182
C + TR+ + R C + +H + LY Q+ F H
Sbjct: 1227 SSCGNKTRQMNV-YGRRCCAPGCRGHMHFEIDDKSLYNQIKFLH 1269
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 88/176 (50%), Gaps = 22/176 (12%)
Query: 406 VFVKENNSHSSCCVIVQNIDRKIYLLPR-------------SEHLKTKEPVSIAQVYSEF 452
V +EN ++SS V + I R +Y LPR + T S+ +V +E
Sbjct: 249 VPARENKTYSSAFVKLDGIQRHLYFLPRPLDVDEEKDEEASASSTPTPTHTSLDEVQAEV 308
Query: 453 DQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFG 512
+ ++ I ++K + KYAF LP VP +EYL V YS K PA P DLSG TFS VFG
Sbjct: 309 SALFSKSGIHEWKCKVDRFKYAFELPDVPAETEYLHVLYSYKYPAFPFDLSGQTFSRVFG 368
Query: 513 TKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQMEKIRITNVC 566
T ++ E +LE+ + GP WL + F S SWC+ E C I N+C
Sbjct: 369 THTALFEQFVLEKDVMGPCWLRI-RSPDFDSVKNTSWCRLETACA------IPNIC 417
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 20/200 (10%)
Query: 30 SACSSFCVGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADEN--VYEE 87
S C SF + + + K + A +L+ L+ G + +EN +Y+
Sbjct: 7 SYCFSFSIEDIFLHLFFHNMSRSGKASAREALSQLRALRESGKTRASVYETEENPELYDS 66
Query: 88 VSEKEYTERVLKR-QEDDWIDDDGGDGYVEDGREIF-------DDDIEDVPQKKEKHDKR 139
V E EY V KR EDD++ DD G GYVE+G + + DD D K K KR
Sbjct: 67 VDEDEYRRVVRKRLDEDDFVVDDNGAGYVENGYDEWGPRNPTSSDDEADENAKDRK--KR 124
Query: 140 KKNKNIQNPNAKGDI---QKLLANMPVKKKKKEEVQLNNDDV-LADLLSEVNTTIAPTLK 195
++ + P + +K LA K ++ +DD LAD+L V+ + L
Sbjct: 125 SSSQRLAAPEQRISTFFKRKALAPPTTKSSSEKRADKRDDDAFLADILGAVDADVMTELP 184
Query: 196 LNTKTNEIVIPKEEPPAPTA 215
K NE PP+ T+
Sbjct: 185 KKRKLNET----RNPPSGTS 200
>gi|255078890|ref|XP_002503025.1| predicted protein [Micromonas sp. RCC299]
gi|226518291|gb|ACO64283.1| predicted protein [Micromonas sp. RCC299]
Length = 1643
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 296/770 (38%), Positives = 397/770 (51%), Gaps = 105/770 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEA----- 615
+++N+ GN+ S+TL R++R E+LLLH FH + Y+LPDK K +K G A
Sbjct: 881 QLSNIAGNLWSKTLQHTRAQRVEYLLLHEFHARKYLLPDKLTAKERKFGRGYQNADADLD 940
Query: 616 ----------NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT 665
GK R AY+GGLVLEPKKG YDK++++MDFNSLYPSIIQEYNICFTT
Sbjct: 941 GGDFDGDGGVKAGKKRGGPAYAGGLVLEPKKGLYDKYVLMMDFNSLYPSIIQEYNICFTT 1000
Query: 666 I--PVRMLQDSDITTLCEYLPEHQVDTGI-LPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ P D LP T + LP IKKLV+ RR+VK ++K ++
Sbjct: 1001 VAQPKADPDDPAAAPPAPTLPTDADGTKVVLPQVIKKLVDRRREVKNMIKT-ERNAARAK 1059
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLNYEVI 781
Q DIRQ ALKLTANSMYGCLGF SRF+A+PLA LVT +GREIL +T L + NL VI
Sbjct: 1060 QLDIRQMALKLTANSMYGCLGFAASRFYAKPLAELVTLQGREILQSTVDLAQGNLGRNVI 1119
Query: 782 YGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
YGDTDS+MI+ + V + Q K +K +K LE+++DG+YK MLLLKKKKYAAL
Sbjct: 1120 YGDTDSIMINTESTNIAEVVDMAKQFKKLSDKRFKVLEIEMDGLYKSMLLLKKKKYAALM 1179
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ +L +G E KG+D+VRRDWS LA E G + +IL + +D ++ IHE
Sbjct: 1180 VKQLPDGSYTTVIEQKGLDIVRRDWSPLAKEQGNLALKEIL-----SGNPTEDVVEGIHE 1234
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK-LKQGD 960
++K R DL NG V + ITKQLTK PE+Y D HVQVALRL ++ + QG+
Sbjct: 1235 TLRKCREDLVNGAVTMDKFIITKQLTKRPEDYPDAANQAHVQVALRLRAAGKREGVNQGE 1294
Query: 961 TISYIIC--------EDGTSEAATQ---------RAYNIEELK-NNSKLKIDVNYYLSQQ 1002
T+ Y+I E + A Q RAY+ +E+ NS LK+D++YYL+QQ
Sbjct: 1295 TVPYVIALKTDASAEEIASGRAVNQSSGGKGLADRAYHPDEVSAENSGLKLDLHYYLTQQ 1354
Query: 1003 IHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSE--ENILGVGEA--EEVK 1058
+HPVV+RL +PIEGTDA IA CLGLD S + Q+ + E +++L A + +
Sbjct: 1355 VHPVVSRLCQPIEGTDAAHIANCLGLDPSKFHHQVVTANGGDEYDDDLLAPAAALDDSER 1414
Query: 1059 YQFC---------DKFEFTCMNPSCKQVNTVE-------APTRLSTHGV----------V 1092
++ C +FEF P + E AP + G
Sbjct: 1415 FKRCKPLVLRTAGGEFEF----PGVDAILAGEVAPDASLAPAPKTNDGAPDAGGKENAGA 1470
Query: 1093 FVLDECINPE--------CKVPPYTYLP--HLINKLSQDMNKYIVKYYEGWLKCEDPGCS 1142
+ +NP V T L L N++ + I YY L+ +D
Sbjct: 1471 GAANPGVNPPNAGKLAGVASVTAATPLGAHALANQVRLAVRDSINSYYSTTLRSDDELAP 1530
Query: 1143 DLTRRCPLGLKTRLCT---------TCHKYKLHRVYTELQLYQQLSFFHYICDITKALTK 1193
TR L + C + + TE LY QL F + D AL +
Sbjct: 1531 SETRNVSLRVGADATAEPGTLPADPKCQGV-MQKTTTEAALYTQLVHFRRLLDYRGALAR 1589
Query: 1194 ---SDTPSIKFDSETYMGYC----KMKQHVERFLESSAYNIVDLKKLFSC 1236
D + + E G C VER L SAY V+L+ LF
Sbjct: 1590 MPPKDRDAARARMEASPGTCAALDAAANEVERTLRRSAYRWVNLRTLFGA 1639
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 106/244 (43%), Gaps = 53/244 (21%)
Query: 363 SRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHS------- 415
++ AD SLPL D FF+DA EDI PGTV+LFG+V V + S
Sbjct: 376 AQLADGSLPLDAD----DTLPFFFVDAHEDI-AHPGTVFLFGRVPVDTSAPTSAPASAPT 430
Query: 416 ---SCCVIVQNIDRKIYLLPRSE----------------------------------HLK 438
S C +V + R ++++PR + L+
Sbjct: 431 ETVSACAVVTGMQRCMFVVPRPDVFDDQNGEIESLERAAEEAAKGADDAAAKKARGALLR 490
Query: 439 TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPA 497
T + V E +I I F + +++ Y F +P +Y L+VR A PA
Sbjct: 491 TLQ-TRAKDVKDEVREILLARGIESFTMKPVKRSYCFERDDIPRGCQYVLKVRCPATGPA 549
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCN 555
LP DL G F V G + LE+L+++ K+ GPSW+ A PS + SWCK EV +
Sbjct: 550 LPVDLKGRHFVAVLGASTPSLEHLVIKSKVMGPSWISIHGARLVPSGQQKSWCKLEVAVD 609
Query: 556 QMEK 559
+ K
Sbjct: 610 RGHK 613
>gi|190344967|gb|EDK36762.2| hypothetical protein PGUG_00860 [Meyerozyma guilliermondii ATCC 6260]
Length = 1438
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 269/739 (36%), Positives = 401/739 (54%), Gaps = 72/739 (9%)
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
DLSE L+V K AL + + ++ +SFL L E K+
Sbjct: 676 DLSEMLDVVCHKKHTALEINFTNPRYAE----DASFLLMALKENA----------SNVKY 721
Query: 542 PSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ 601
+ I++ +Q + K ++TN+ GN S TL G R+ RNEF+LLH FH Y++PDK+
Sbjct: 722 TAEIAFA---IQILSLSK-QLTNIAGNAWSHTLSGTRAGRNEFILLHEFHRNKYIVPDKE 777
Query: 602 --YGKNKKEGEET------GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYP 653
+ KN +E ++ KK Y GGLV EP+KG + +I++MDFNSLYP
Sbjct: 778 DKFHKNSSYQQEAKVENNEDDSTTVTSNKKPKYQGGLVFEPEKGLHKNYILVMDFNSLYP 837
Query: 654 SIIQEYNICFTTIP-----VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK 708
SIIQEYNICFTT+ V ++ D+ L P+ + G+LP + LV RR+VK
Sbjct: 838 SIIQEYNICFTTVDRDDFNVSHDEEKDMPVL----PDRESVQGVLPRLLNTLVSRRREVK 893
Query: 709 ALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
L+K P S QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++
Sbjct: 894 KLLKDPKNSLVERAQYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMD 953
Query: 769 TKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
T+ L E++ V+YGDTDS+MI V D+ KIG Q K N+ YK LE+DID V+K
Sbjct: 954 TRQLAESIGLRVVYGDTDSVMIDTGVTDFKEAIKIGEQFKLHVNERYKLLEIDIDNVFKR 1013
Query: 829 MLLLKKKKYAALSIS-KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY 887
+LL KKKYAA++ S G+ E+KG+D+ RR++ QL+ E F++ +IL
Sbjct: 1014 LLLHAKKKYAAMNASIDRKTGEEKVVLEVKGLDMRRREYCQLSKEISTFILEKIL----- 1068
Query: 888 TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR 947
D + L +++++++K+ + +G +P+ +I +L+K P Y + K +P V+VA+
Sbjct: 1069 ADSDPEQALMDVYDYLEKMSAKIKSGEIPVNKFQINTRLSKDPNNYPNGKTMPPVRVAML 1128
Query: 948 LNNTNSKKLKQGDTISYIICEDGTSE---AATQRAYNIEE-LKNNSKLKIDVNYYLSQQI 1003
L + K +K G I+++I T + + RA I++ LK +S + D NYYL +QI
Sbjct: 1129 LRES-GKVIKAGTVITFVITAPQTEDEKSSPADRARPIQDVLKKDSIYRPDPNYYLEKQI 1187
Query: 1004 HPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-KYQFC 1062
V RLLE IEG D +R+A L +DT Y +++ S + E + +V +++ C
Sbjct: 1188 FAPVERLLERIEGIDMMRVASSLDIDTKKYVLRVRNSDTHAGEIVPLESNISDVERFRQC 1247
Query: 1063 DKFEFTCMNPSCKQVNTVEAPT--RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQ 1120
C + + A +++ +G+ C N +C YT+ I +
Sbjct: 1248 SYLVLKCKCGVNFRFGGIVASNDYKVTFNGI------CCN-KCH---YTFPTFRIAAQLE 1297
Query: 1121 DM-NKYIVKYYEGWLKCEDPGCSDLTR-------RCPLGLKTRL-CTTCHKYKLHRVYTE 1171
+M +++ YY GWL C+D C TR RC T C +YK Y++
Sbjct: 1298 NMIRRHVSLYYAGWLVCDDGACGITTRQISVYGKRCIGASGTATGCKGVMRYK----YSD 1353
Query: 1172 LQLYQQLSFFHYICDITKA 1190
LY QL +F I D+ KA
Sbjct: 1354 RALYNQLLYFSSIFDVDKA 1372
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 240/510 (47%), Gaps = 69/510 (13%)
Query: 81 DENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDGREIFDDDIED--VPQKKEK 135
+ N+Y+EV E Y E KR + DD+I DD G+GYV++G + +D++ ++E
Sbjct: 32 ESNIYDEVDENTYREH--KRDQLMNDDFIVDDDGEGYVDNGEDEWDENTRPKYYSDEEEL 89
Query: 136 HDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLK 195
D+ +K K PVK K ++ N + + N AP +K
Sbjct: 90 VDEPRKRKE----------------KPVKIAKTAKI---NTFFKSSAFPDSNP--APAVK 128
Query: 196 LNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVME 255
+ K ++I+ E P T K + F K ++ KP + + +K E K+ S ++
Sbjct: 129 SDAKIDDILDDFEGPA--TKKFKFSTFGKTSSKPQQKAKPSYRFATSMKSEKKNPSSDVQ 186
Query: 256 VEMNVAEQSKEEPVD--DGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEK 313
+ +++ ++ ++P E ID D+ + L E+ K + ES S +E
Sbjct: 187 IYDDMSPETPDQPSSPIKSKAENEVIDISDDGDAKEANLKEEPKSQ-----PESDSEDEV 241
Query: 314 VDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLA 373
V +S S +ST + + + ++++P T +V + D + A
Sbjct: 242 VVARRPKSAVSRTTMST-----LTAVRTSELPSSSPVRSQPVTFTEKV---SQSDIVGSA 293
Query: 374 TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
+D + F+MF+LD E ++ LFGKV KE S V V I R++Y LPR
Sbjct: 294 SDTTDDG-FKMFWLDYCE----VDSSLLLFGKVLTKEGKLVSGV-VQVNGISRELYFLPR 347
Query: 434 SEHLK------TKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY 486
E K T++PV+ VY E + +++ + +++K + KYAF L G+P ++Y
Sbjct: 348 -EFRKVDGMEDTEQPVTTDDVYHEIAPHLLSKFGLEMIRAKKEKMKYAFELSGIPRDTDY 406
Query: 487 LEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
L++ K P LPSDL G+TF HVFGT +S E+ +L++ I GP WL+ + F
Sbjct: 407 LKILLPFKTPKSRNLVLPSDLEGETFRHVFGTNASIFESFVLQQNIMGPCWLDI-KGGNF 465
Query: 542 PS--RISWCKYEVQCNQMEKIRITNVCGNV 569
+ S C+ EV + + +T + GN+
Sbjct: 466 EAIQNTSHCQVEVAVDAPKA--VTPISGNL 493
>gi|146423101|ref|XP_001487483.1| hypothetical protein PGUG_00860 [Meyerozyma guilliermondii ATCC 6260]
Length = 1438
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 269/739 (36%), Positives = 401/739 (54%), Gaps = 72/739 (9%)
Query: 482 DLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
DLSE L+V K AL + + ++ +SFL L E K+
Sbjct: 676 DLSEMLDVVCHKKHTALEINFTNPRYAE----DASFLLMALKENA----------SNVKY 721
Query: 542 PSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ 601
+ I++ +Q + K ++TN+ GN S TL G R+ RNEF+LLH FH Y++PDK+
Sbjct: 722 TAEIAFA---IQILSLSK-QLTNIAGNAWSHTLSGTRAGRNEFILLHEFHRNKYIVPDKE 777
Query: 602 --YGKNKKEGEET------GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYP 653
+ KN +E ++ KK Y GGLV EP+KG + +I++MDFNSLYP
Sbjct: 778 DKFHKNSSYQQEAKVENNEDDSTTVTSNKKPKYQGGLVFEPEKGLHKNYILVMDFNSLYP 837
Query: 654 SIIQEYNICFTTIP-----VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK 708
SIIQEYNICFTT+ V ++ D+ L P+ + G+LP + LV RR+VK
Sbjct: 838 SIIQEYNICFTTVDRDDFNVSHDEEKDMPVL----PDRESVQGVLPRLLNTLVSRRREVK 893
Query: 709 ALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
L+K P S QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++
Sbjct: 894 KLLKDPKNSLVERAQYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMD 953
Query: 769 TKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
T+ L E++ V+YGDTDS+MI V D+ KIG Q K N+ YK LE+DID V+K
Sbjct: 954 TRQLAESIGLRVVYGDTDSVMIDTGVTDFKEAIKIGEQFKLHVNERYKLLEIDIDNVFKR 1013
Query: 829 MLLLKKKKYAALSIS-KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY 887
+LL KKKYAA++ S G+ E+KG+D+ RR++ QL+ E F++ +IL
Sbjct: 1014 LLLHAKKKYAAMNASIDRKTGEEKVVLEVKGLDMRRREYCQLSKEISTFILEKIL----- 1068
Query: 888 TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR 947
D + L +++++++K+ + +G +P+ +I +L+K P Y + K +P V+VA+
Sbjct: 1069 ADSDPEQALMDVYDYLEKMSAKIKSGEIPVNKFQINTRLSKDPNNYPNGKTMPPVRVAML 1128
Query: 948 LNNTNSKKLKQGDTISYIICEDGTSE---AATQRAYNIEE-LKNNSKLKIDVNYYLSQQI 1003
L + K +K G I+++I T + + RA I++ LK +S + D NYYL +QI
Sbjct: 1129 LRES-GKVIKAGTVITFVITAPQTEDEKSSPADRARPIQDVLKKDSIYRPDPNYYLEKQI 1187
Query: 1004 HPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-KYQFC 1062
V RLLE IEG D +R+A L +DT Y +++ S + E + +V +++ C
Sbjct: 1188 FAPVERLLERIEGIDMMRVASSLDIDTKKYVLRVRNSDTHAGEIVPLESNISDVERFRQC 1247
Query: 1063 DKFEFTCMNPSCKQVNTVEAPT--RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQ 1120
C + + A +++ +G+ C N +C YT+ I +
Sbjct: 1248 SYLVLKCKCGVNFRFGGIVASNDYKVTFNGI------CCN-KCH---YTFPTFRIAAQLE 1297
Query: 1121 DM-NKYIVKYYEGWLKCEDPGCSDLTR-------RCPLGLKTRL-CTTCHKYKLHRVYTE 1171
+M +++ YY GWL C+D C TR RC T C +YK Y++
Sbjct: 1298 NMIRRHVSLYYAGWLVCDDGACGITTRQISVYGKRCIGASGTATGCKGVMRYK----YSD 1353
Query: 1172 LQLYQQLSFFHYICDITKA 1190
LY QL +F I D+ KA
Sbjct: 1354 RALYNQLLYFSSIFDVDKA 1372
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 241/510 (47%), Gaps = 69/510 (13%)
Query: 81 DENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDGREIFDDDIED--VPQKKEK 135
+ N+Y+EV E Y E KR + DD+I DD G+GYV++G + +D++ ++E
Sbjct: 32 ESNIYDEVDENTYREH--KRDQLMNDDFIVDDDGEGYVDNGEDEWDENTRPKYYSDEEEL 89
Query: 136 HDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLK 195
D+ +K K PVK K ++ N + ++N AP +K
Sbjct: 90 VDEPRKRKE----------------KPVKIAKTAKI---NTFFKSSAFPDLNP--APAVK 128
Query: 196 LNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVME 255
+ K ++I+ E P T K + F K ++ KP + + +K E K+ S ++
Sbjct: 129 SDAKIDDILDDFEGPA--TKKFKFSTFGKTSSKPQQKAKPSYRFATSMKLEKKNPSSDVQ 186
Query: 256 VEMNVAEQSKEEPVDDGLW--EQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEK 313
+ +++ ++ ++P E ID D+ + L E+ K + ES S +E
Sbjct: 187 IYDDMSPETPDQPSSPIKLKAENEVIDISDDGDAKEANLKEEPKSQ-----PESDSEDEV 241
Query: 314 VDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLA 373
V +S S +ST + + + ++++P T +V + D + LA
Sbjct: 242 VVARRPKSAVSRTTMST-----LTAVRTSELPSSSPVRSQPVTFTEKV---SQSDIVGLA 293
Query: 374 TDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR 433
D + F+MF+LD E ++ LFGKV KE S V V I R++Y LPR
Sbjct: 294 LDTTDDG-FKMFWLDYCE----VDSSLLLFGKVLTKEGKLVSGV-VQVNGISRELYFLPR 347
Query: 434 SEHLK------TKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY 486
E K T++PV+ VY E + +++ + +++K + KYAF L G+P ++Y
Sbjct: 348 -EFRKVDGMEDTEQPVTTDDVYHEIAPHLLSKFGLEMIRAKKEKMKYAFELSGIPRDTDY 406
Query: 487 LEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
L++ K P LPSDL G+TF HVFGT +S E+ +L++ I GP WL+ + F
Sbjct: 407 LKILLPFKTPKSRNLVLPSDLEGETFRHVFGTNASIFESFVLQQNIMGPCWLDI-KGGNF 465
Query: 542 PS--RISWCKYEVQCNQMEKIRITNVCGNV 569
+ S C+ EV + + +T + GN+
Sbjct: 466 EAIQNTSHCQVEVAVDAPKA--VTPISGNL 493
>gi|83774919|dbj|BAE65042.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1453
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 250/650 (38%), Positives = 375/650 (57%), Gaps = 48/650 (7%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK---EGEETGEANKG 618
+TN+ GN +RTL G R+ERNE++LLH FH Y+ PDK K +K + ++ + +
Sbjct: 774 LTNIAGNSWARTLSGTRAERNEYILLHEFHRNKYICPDKYSAKLQKAEVKLQDGDDDDAT 833
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
+KK Y GGLV EP+KG YD+F+++MDFNSLYPSIIQEYNICFTT+ T
Sbjct: 834 DKKKKDKYKGGLVFEPEKGLYDRFVLVMDFNSLYPSIIQEYNICFTTV-------ERTAT 886
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+ + + GILP I LV RR+VK LMK + + L +D +Q A KLTANSM
Sbjct: 887 VRVFAEKSCGKQGILPRLIATLVGRRREVKKLMKDKRATPEQLALWDTKQLAFKLTANSM 946
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLG+ SRF+A+PLA L T KGREIL +TK L E+ VIYGDTDS+MI+ N++
Sbjct: 947 YGCLGYTQSRFYARPLAMLTTFKGREILRSTKELAESKQLRVIYGDTDSVMINTNMDTLS 1006
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
K+G + K N+ Y+ LE+DID +++ +LL KKKYAA++++++ +GK + E+KG
Sbjct: 1007 DALKVGEEFKKSVNERYRLLEIDIDNIFRRLLLHAKKKYAAINMTEM-DGKYVDKLEVKG 1065
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+D+ RR++ L+ E + +++++L + + L +H++++ + + VP+
Sbjct: 1066 LDMKRREYCALSKEVSQRLLNEVLSGEDQ-----EIVLNRVHDYLRDLAGKMREFAVPVQ 1120
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC---EDGTSEAA 975
I +L+K PEEY +++ +P VQVALR K ++ D ISYI+ + +S A
Sbjct: 1121 KYVIYTKLSKRPEEYPNKETMPPVQVALR-ELARGKSVRPNDVISYIVTSGDSETSSLAP 1179
Query: 976 TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
+R+Y +++ +K +S L D+ +YL +QI P + RL PI GTDAVR+AECLGLD Y+
Sbjct: 1180 AKRSYTLQDVMKPDSGLNPDIEFYLLKQIFPPIERLCAPIPGTDAVRLAECLGLDVRKYQ 1239
Query: 1035 SQIKESIQQSEENILGVGE--AEEVKYQFCDKFEFTCMNPSCKQVNTVE---APTRLSTH 1089
Q +I + + V+++ + TC SCK+ + E A + +
Sbjct: 1240 INTSSGGNQQNTDIFPLESQIPDSVRFETAARLTLTCR--SCKEKSVFEGLAASSHMCNA 1297
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR--- 1146
+F C N C+ +T L +I +L + KYYEGWL C+D C + TR
Sbjct: 1298 NGLF----CPNTACQ-KQFTVL-TIIAQLESQIRAQTSKYYEGWLVCDDSACGNRTRQMS 1351
Query: 1147 ----RCPLGLKTRL--CTTCHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
RC LG + C Y+ Y+E QLY QL +F + D+ KA
Sbjct: 1352 VYGHRC-LGPRGHAEGCLGRMSYE----YSEKQLYNQLLYFAGLWDVDKA 1396
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 156/545 (28%), Positives = 256/545 (46%), Gaps = 79/545 (14%)
Query: 59 AAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +L+ L+ G K YE +++YEEV ++ Y + + R EDD++ DD G+GY
Sbjct: 6 AKLAELRALRASGKKRISTYEVEEQDDIYEEVDDEGYKKIIRNRLDEDDFVVDDNGEGYA 65
Query: 116 EDGREIFDDDIED-------------VPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMP 162
+DGRE + D D ++K + DK++K K I N +K + A+ P
Sbjct: 66 DDGREDWTVDYHDSESDDGDLPANGKAAKRKREEDKQRKEK-INNGISKYFNKGSGASAP 124
Query: 163 VKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANF 222
K K ++ +ADLL EV+T N +N + PT +
Sbjct: 125 ---KPKPVATAEDEAFMADLLGEVDT--------NVVSNHV---------PTQNVIKSET 164
Query: 223 SKPIKVEKKIEKPIKKEPSPLKDEIKSNDS------VMEVEMNVAEQSKEEPVDDGLWEQ 276
+ ++V + P+ P P K + K +S + ++++ PV D +
Sbjct: 165 RRKVRV---LSPPLSHRPRPQKKQTKDENSDPMSPIGQKPDLDLDNDDGPLPVADD--DD 219
Query: 277 MQIDDWDNSQQTQDVLPEQAKVELQIEAI--ESQSIEEKVDVTNV-ESVSSAVELSTSPP 333
+ + D S + + + ++ E E + E +VT E+ +++V ++ S P
Sbjct: 220 VPMSDPMPSSPVSKAVERKTAITVKTEDPDEEDNDLMEIAEVTGQHEAKTTSVNMAGSRP 279
Query: 334 PQVVEKKEHKC---------------AEWEAIQTEPST-SEPQVHSRTADDSLPLATDHE 377
P ++K+ + A W ++ + + S P +RT L E
Sbjct: 280 PPKIKKEAYTTPANSSPVKAMPDVANASWNDVRNKLNVLSSPASETRTFG-KLRAQDVVE 338
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
+ RMF++D F ++ G++ LFGKV K+ +++S V V NI RK+Y LPR
Sbjct: 339 DDGSLRMFWID-FTEVN---GSLCLFGKVRNKQTGNYASAFVKVDNILRKLYFLPREYRH 394
Query: 438 K----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
K T E V + VY+E D + ++ K+ K + +KYAF +PGVP +EYL++ Y
Sbjct: 395 KHGRDTDEEVDMEDVYNEVDGMMSRLKVGMHKIKPCTRKYAFEMPGVPKETEYLKLLYPY 454
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYE 551
PALP + G+TFSHVFGT +S E +L + I GP WL F E F + SWCK+E
Sbjct: 455 DKPALPMETKGETFSHVFGTNTSLFEQFVLWKNIMGPCWLRF-EGADFSAVNNASWCKFE 513
Query: 552 VQCNQ 556
Q ++
Sbjct: 514 CQVSK 518
>gi|149240417|ref|XP_001526084.1| DNA polymerase alpha catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
gi|146450207|gb|EDK44463.1| DNA polymerase alpha catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
Length = 1529
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/683 (37%), Positives = 386/683 (56%), Gaps = 61/683 (8%)
Query: 541 FPSRI-SWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPD 599
F ++I S + +Q + K ++TN+ GN S TL G R+ RNE++LLH F + +Y++PD
Sbjct: 802 FNAKITSEIAFSIQILSLSK-QLTNIAGNAWSHTLSGTRAGRNEYILLHEFRKNNYIVPD 860
Query: 600 KQ--------YGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
K+ Y + K + KK + GGLV EP+KG + +I++MDFNSL
Sbjct: 861 KEDALHKNTSYLQQAKLESFDDDVQTATSNKKPKFQGGLVFEPEKGLHKNYILVMDFNSL 920
Query: 652 YPSIIQEYNICFTTIPVRMLQDS-----DITTLCEYLPEHQVDTGILPSEIKKLVESRRQ 706
YPSIIQE+NICFTT+ ++ D+ TL P++ D G+LP + LV RR+
Sbjct: 921 YPSIIQEFNICFTTVDRDRFNNTHDEERDLPTL----PDNDADAGVLPRLLNTLVTRRRE 976
Query: 707 VKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREIL 766
VK L+K P + QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL
Sbjct: 977 VKKLLKDPKNTPFQNAQYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREIL 1036
Query: 767 LNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVY 826
++T+ L E+ + V+YGDTDS+MI ++ K+G Q K + N+ Y+ LE+DID V+
Sbjct: 1037 MDTRQLAESNSLRVVYGDTDSVMIDTGADNLRDAVKVGEQFKVQVNERYRLLEIDIDNVF 1096
Query: 827 KYMLLLKKKKYAAL--SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDE 884
+ +LL KKKYAA+ SI+K + G+ + + E+KG+D+ RR++ QL+ E FV+ +IL
Sbjct: 1097 RRLLLHAKKKYAAMNASINK-ATGEEVTTLEVKGLDMRRREYCQLSKEISTFVLMKIL-- 1153
Query: 885 QSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQV 944
++ ++ L +++++++++R + VP +I +L+K P Y + K +P VQV
Sbjct: 1154 ---SNADPEEALMDVYQYLEEMRDKIIANQVPAIKYKINTKLSKDPTSYPNGKNMPQVQV 1210
Query: 945 ALRLNNTNSKKLKQGDTISYII----CEDGTSEAATQRAYNIEE-LKNNSKLKIDVNYYL 999
AL+L N K +K G I+Y+I E+ TS A RA I++ L ++L+ D YYL
Sbjct: 1211 ALKLKN-QGKVIKAGSVITYVITAPTAENDTSSVA-DRARAIQDLLVQKTELRPDPTYYL 1268
Query: 1000 SQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKY 1059
+QI V RLLE I+ D VR+A LG+DT Y ++K E + ++ ++
Sbjct: 1269 EKQIFAPVERLLEKIDSVDMVRVATALGIDTKRYILKVKNGDLNGEIMPMESRISDAERF 1328
Query: 1060 QFCDKFEFTCMNPSCKQVNTVEAPT--RLSTHGVVFVLDECINPECKVPPYTY-LPHLIN 1116
+ C + ++A R++ +GV +C YT+ L L
Sbjct: 1329 RQSSFLVLKCKCGHHFRFGGIQASVDYRVTFNGV----------QCSKCEYTFPLIKLTA 1378
Query: 1117 KLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-------RCPLGLKTRL--CTTCHKYKLHR 1167
+L + K+I YY GWL C+DP C TR RC +GL + C Y+
Sbjct: 1379 QLECTIRKHISVYYAGWLVCDDPSCGITTRQISVYGKRC-IGLSGKGLDCKGVMSYR--- 1434
Query: 1168 VYTELQLYQQLSFFHYICDITKA 1190
YT+ LY QL +F I D+ K
Sbjct: 1435 -YTDKALYNQLLYFQSIFDVEKT 1456
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL---- 437
FRMF++D E ++ LFGKV ++ S V V + R++++LPR +
Sbjct: 382 FRMFWMDYAE----VENSLLLFGKVATRDGKLVSGV-VQVNGLCRELFILPREYRMVDGE 436
Query: 438 -KTKEP-VSIAQVYSEFDQIATQ-YKILDFKSRKIEKKYAFNLPGVPDLSEYLEV----R 490
T P V+ V E + + YK+ +++ KKYAF L +P +EYL+V
Sbjct: 437 EDTGSPRVTPNDVREEITPLFMEHYKLETLRAKAETKKYAFELANIPKEAEYLKVLLPYN 496
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWC 548
+ LP++ G TF HVFG+ ++ E+ + +R I GP WL+ E F + + C
Sbjct: 497 NATNRKVLPANTEGQTFRHVFGSNTNMFESFVTQRNIMGPCWLDI-EGGNFEAIQNSTHC 555
Query: 549 KYEVQCNQMEKI 560
+ EV + KI
Sbjct: 556 QVEVAVSLPNKI 567
Score = 40.4 bits (93), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 84 VYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVEDGREIFDD-------DIEDVPQKKEK 135
+Y+EV E+ + E K+ +DD+I DD G+GYV++G + +DD ED +
Sbjct: 41 IYDEVDEETFREHKRKQLMDDDFIVDDNGEGYVDNGADEWDDASRPNYYSDEDSDTEVRT 100
Query: 136 HDKRKKNKNIQNPNAKGDIQKLLANM-----PVKKKKKEEVQLNNDDVLADL 182
K++KN++ K ++N + K++V N DD+L D
Sbjct: 101 SSKKRKNRHHNQRAVKVAKTAPISNFFKHSNDINGGIKKKVDTNIDDILEDF 152
>gi|452839534|gb|EME41473.1| hypothetical protein DOTSEDRAFT_176630 [Dothistroma septosporum
NZE10]
Length = 1475
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 274/728 (37%), Positives = 402/728 (55%), Gaps = 81/728 (11%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK---NKK-EGEETGEANK 617
+TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDK +GK NK+ E +
Sbjct: 768 LTNLAGNSWARTLSGTRAERNEYILLHEFYRNKYICPDKVFGKGAANKRLEEDNPEGEEG 827
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
+KK + GGLV EP+KG YD FI++MDFNSLYPSIIQEYNICFTT+ S+IT
Sbjct: 828 DDKKKKDKFKGGLVFEPEKGLYDNFILVMDFNSLYPSIIQEYNICFTTV-----NRSEIT 882
Query: 678 TLCEYLPEHQVDT---GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
E +PE DT GILP I+ LV RR+VK LMK + + D +D++Q+ALKLT
Sbjct: 883 EEDEKIPEVPDDTSNKGILPRLIRTLVSRRREVKKLMKDKSTTEDQRNTWDVKQQALKLT 942
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN-YEVIYGDTDSLMISCN 793
ANSMYGCLG+ SRF+A+PLAAL T+KGREIL +TK L E+ + VIYGDTDS+M++ N
Sbjct: 943 ANSMYGCLGYTKSRFYARPLAALTTSKGREILQSTKDLAESAHALRVIYGDTDSVMVNTN 1002
Query: 794 VNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICS 853
++ K+G + + N+ Y+ LE++ID +++ +LL KKKYAA+ + + G
Sbjct: 1003 ADNILDAIKMGKEFQKSVNEKYELLEIEIDHIFRRLLLHAKKKYAAIQMVEADGGVWKEK 1062
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILD-EQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
++KG+D+ RR++ QL+ + K +++ +L E+S S IH++++ + +
Sbjct: 1063 LDVKGLDMKRREYCQLSKDTSKELLNYLLSGEESEVAVS------KIHDYLRSLGEKMRQ 1116
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED--G 970
+P I QL K P+EY + ++P VQVAL+ K +K D ++++IC + G
Sbjct: 1117 HAIPPHKYTIYTQLGKDPKEYPNSNSMPAVQVALK-KIAKGKPVKAKDVMAFVICGNSAG 1175
Query: 971 TSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
+E A + AY ++E + +S L DV+YYL +QI P V RL PI GT+ +AECLGLD
Sbjct: 1176 NNETAAKNAYELDEVMAKDSGLVPDVDYYLHKQILPPVERLCAPISGTNVTLLAECLGLD 1235
Query: 1030 TSLYR-SQIKESIQQSEE-NILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLS 1087
TS YR S ++ +QS E L + ++++ C+ E C+ CK
Sbjct: 1236 TSKYRVSGASKAAEQSNEITRLESQIPDHIRFKDCEALELLCL--GCKH--------HFE 1285
Query: 1088 THGVVFV--LDE---------------CINPECKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
HG+ + DE C +C+ T L +L Q + ++ KYY
Sbjct: 1286 YHGLNYTPPSDETPLVPFGILTNDGLACPRGDCRKKITTLT--LSAQLEQQIRRHTSKYY 1343
Query: 1131 EGWLKCEDPGCSDLTR-------RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHY 1183
WL C+DP C TR RC LG K L C ++ Y+E LY QL +
Sbjct: 1344 SAWLICDDPACGMRTRQMSVYGHRC-LGPKG-LAYGCSG-RMSLEYSEKALYNQLLYLQG 1400
Query: 1184 ICDITKALTKSDTP--SIKFDS---------ETYMGYCKMK-----QHVERFLESSAYNI 1227
I D K + K S+K DS + G K + + V+ +L+ SA+
Sbjct: 1401 IFDTDKMVEKMSAAGGSVKVDSAEGEKRDKTKVLAGMNKQRFGICLEVVKAYLDKSAWGW 1460
Query: 1228 VDLKKLFS 1235
V ++ LF
Sbjct: 1461 VSMESLFG 1468
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 159/587 (27%), Positives = 265/587 (45%), Gaps = 90/587 (15%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGD 112
+ ++ A + L+ G+ + YE E +YE V ++ Y + V R +DD++ DD G+
Sbjct: 5 RADRLAQLRALR-AAGKTAFNDYEVQEAEPIYETVDDEGYKKVVRSRLDQDDFVVDDNGE 63
Query: 113 GYVEDGREIFDDDIE---------DVP-QKKEKHDKRKKNKNIQNPNAKGDIQKLLANMP 162
GY +DGRE + D+ + D+P K KR+ + + Q KG +
Sbjct: 64 GYADDGREDWQDERQAMDDSESDGDLPVNSKAAKRKREDDADRQEKLNKGISKYFNQKTT 123
Query: 163 VKKKKKEEVQLNNDDV-LADLLSEVNTTI---APTLKLNTKTNEIVIPKEEPPAPTAKEY 218
K V+ DD +ADLL EV+T I AP+ K+N+ + P +E
Sbjct: 124 SAAPKPRPVRTAEDDAFMADLLGEVDTNIQRRAPSYGKQIKSNDRRKTRVLSPPLEDREN 183
Query: 219 LANFSKPIKVEKKIEKPIKKEPS--------------PLKDEIKSNDSVMEVEMNVAEQS 264
+ +K ++ ++ P + P+ D + S+ + VE +
Sbjct: 184 ASYRAKDPSKKQIVDTPPAPQAGQDEDTYFVQPDDDVPMSDPLPSSPAAKAVERK-EKMK 242
Query: 265 KEEPVDDGLWEQMQIDDWDNSQQTQDV-------LPEQAKVELQI--EAIESQSIEEKVD 315
E+ +D L E ++ N QT +V +P+ K + ++++ E VD
Sbjct: 243 TEDAEEDDLMEIAEVTGSSN-LQTANVNIRGTRPVPKMVKTSYPTPDSSSPTRALTEDVD 301
Query: 316 VTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATD 375
+T +++V+ + + +SP +EP + + A A D
Sbjct: 302 MTAIDNVAQKLNILSSP-----------------------AAEPAMAGKLA------AKD 332
Query: 376 H-ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
E+ R F+ D E G++ LFGKV ++N+S SC V V NI RK+Y LPR
Sbjct: 333 ACEDDGSLRFFWTDYTE----VNGSLCLFGKVKNRKNDSFVSCFVKVDNIMRKLYFLPRE 388
Query: 435 EHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
K T E V + VY E D + T++++ K + +KYAF LPG+P +EYL++
Sbjct: 389 NRRKHGVETDEEVDMGMVYEEVDGLMTKHRVSMHKIKPCTRKYAFELPGIPKEAEYLKLL 448
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCK 549
Y LP D+ G+TFSHVFGT ++ E ++ + I GP WL+ A+ + SWCK
Sbjct: 449 YPYDKQPLPMDMQGETFSHVFGTNTNMFEQFVMWKNIMGPCWLQIDNADFNAVNNASWCK 508
Query: 550 YEVQCNQMEKIRITNVCGNVLS----------RTLMGGRSERNEFLL 586
E+Q N+ +I + N+ + RT + +NE L+
Sbjct: 509 LELQVNKPNEITVMGESDNLDAPPLTLMSLALRTTFNQKENKNEILV 555
>gi|354545340|emb|CCE42068.1| hypothetical protein CPAR2_806170 [Candida parapsilosis]
Length = 1454
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 250/665 (37%), Positives = 376/665 (56%), Gaps = 65/665 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG-------------KNKK 607
++TN+ GN S TL G R+ RNE++LLH F +Y++PDK+ +N +
Sbjct: 748 QLTNIAGNAWSHTLSGTRAGRNEYILLHEFRRNNYIVPDKEDSTHKNTSFQQEAQLENAE 807
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
E +T +NK K Y GGLV EP+KG + +I++MDFNSLYPSIIQEYNICFTT+
Sbjct: 808 EDVQTATSNK-----KPKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEYNICFTTVD 862
Query: 668 VRMLQDSDITTLCE-----YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+D TT E +P++ + G+LP + LV RR+VK L+K P +
Sbjct: 863 ----RDRFNTTHNEDKDMPLIPDNDSERGVLPRLLNSLVTRRREVKKLLKDPKNTPFQKA 918
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIY 782
QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E+ + V+Y
Sbjct: 919 QYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESSSLRVVY 978
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL-- 840
GDTDS+MI Y K+G++ K + N+ YK LE+DID V+K +LL KKKYAA+
Sbjct: 979 GDTDSVMIDTGAQTYKDAIKVGDEFKVQVNERYKMLEIDIDNVFKRLLLHAKKKYAAMNV 1038
Query: 841 SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
SI+K++ G+ + + E+KG+D+ RR++ QL+ + FV+ +IL +D ++ LQ+++
Sbjct: 1039 SINKVT-GEEVTTLEVKGLDMRRREYCQLSKDISTFVLMKIL-----SDADPEEALQDVY 1092
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
++++R + +P+ +I +L+K P Y + K++P VQVALRL N K +K G
Sbjct: 1093 TFLEEMRDKILGNEMPVDRFKINTKLSKDPNNYPNGKSMPQVQVALRLKN-EGKVVKAGS 1151
Query: 961 TISYII---CEDGTSEAATQRAYNIEELKNNS-KLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
ISY++ ++ +RA I+EL + LK D +YL +QI V RLL+ IE
Sbjct: 1152 VISYVVTAPTDENDKSTVAERARAIQELLSKKLNLKPDPMFYLEKQIFAPVERLLDKIES 1211
Query: 1017 TDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ 1076
D +R+A LG+DT Y ++K E + +++ +++ C +
Sbjct: 1212 VDMMRVATSLGVDTKRYILKVKNEGFNGEITSIESNISDQERFRQSSYLVLKCNCGHVFR 1271
Query: 1077 VNTVEAPT--RLSTHGVVFVLDECINPECKVPPYTY-LPHLINKLSQDMNKYIVKYYEGW 1133
++A +++ +GV CK YT+ L +L + K+I YY GW
Sbjct: 1272 YGGIQASNDYKVTFNGVT----------CKKCDYTFPTIKLTAQLEATIRKHIALYYCGW 1321
Query: 1134 LKCEDPGCSDLTR-------RCPLGLKTRL-CTTCHKYKLHRVYTELQLYQQLSFFHYIC 1185
L C+D C TR RC L C +Y+ YT+ LY QL +F+ I
Sbjct: 1322 LVCDDNSCGIETRQISVYGKRCIGASGKGLDCRGVMRYR----YTDKALYNQLLYFNSIF 1377
Query: 1186 DITKA 1190
D+ K
Sbjct: 1378 DVEKT 1382
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 233/550 (42%), Gaps = 105/550 (19%)
Query: 84 VYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDGREIFDD--------DIEDVPQK 132
+Y+EV E+ + E KR + DD+I DD G+GYV++G + +DD D +DV
Sbjct: 37 IYDEVDEETFREH--KRHQLMNDDFIVDDNGEGYVDNGADEWDDSSRPNYYSDEDDVDSN 94
Query: 133 KEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAP 192
K K K+ + + I+ I + ++ + ++V +N DD+L P
Sbjct: 95 KRKRKKKDEQRPIKVAKT-APINNFFKSTTIRTNEVKKVDMNIDDILEGFQD------VP 147
Query: 193 TLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKP--------IKKE-PSPL 243
K+N AK + ANF K + ++K+ KP I KE SP
Sbjct: 148 QKKVNV----------------AKSF-ANFKKSVPIKKR--KPNTSFTFSTINKERKSPS 188
Query: 244 KDEIK-SNDSVMEVEMNVAEQSKEEPV----DDGLWEQMQIDDWDNSQQ---TQDVLPEQ 295
+ S+D M+ E + PV D + E+ +D + ++ ++ LPE
Sbjct: 189 VEAFNASSDYTMDFE---EVEQPSSPVTTIASDAVQEKENVDPASSPRKEVKSEKTLPES 245
Query: 296 AKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPS 355
K+D ES S + P K+EH A +++
Sbjct: 246 -----------------KLD----ESDSDDDVIFAKRPKTSGVKREHNTATISSVKAGAI 284
Query: 356 TSEPQVHSRTA----DDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKEN 411
+S P TA D + + FRMF++D E ++ LFGK+ K+
Sbjct: 285 SSSPPRQPYTAFANHTDKIDEQDVNSETGSFRMFWMDYAE----VENSLLLFGKIQTKDG 340
Query: 412 NSHSSCCVIVQNIDRKIYLLPRSEHLKT-KEPVSIAQVYSEFDQIATQ-YKILDFKSRKI 469
+S V + + R++Y+LP+ + + + S V E I + YK+ +++
Sbjct: 341 -KLASGVVQINGLCRELYILPKEKQSNSGNQRFSTDDVLDEITPIFMENYKLESLRAKPE 399
Query: 470 EKKYAFNLPGVPDLSEYLEVRYSAKC----PALPSDLSGDTFSHVFGTKSSFLENLLLER 525
KKYAF L +P +EYL+V LP+D G+TFSH+FGT ++ E+ + +R
Sbjct: 400 TKKYAFELAYIPKEAEYLKVLLPYNTVTNRKVLPADTEGETFSHIFGTNANMFESFVTQR 459
Query: 526 KIKGPSWLEFPEAEKFPSR-ISWCKYEVQCNQMEKIRITN---------VCGNVLSRTLM 575
I GP WLE + R S C+ EV KI + + C ++ T+M
Sbjct: 460 GIMGPCWLEIQGGDFDAIRNSSHCQIEVAIASPGKISVVDKAPPAAPDLTCTSISVLTVM 519
Query: 576 GGRSERNEFL 585
+ + E +
Sbjct: 520 NPKQNKQEVV 529
>gi|320590664|gb|EFX03107.1| DNA polymerase alpha catalytic [Grosmannia clavigera kw1407]
Length = 1510
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 271/747 (36%), Positives = 399/747 (53%), Gaps = 76/747 (10%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH FH Y+ PDKQ
Sbjct: 775 IAALGLRVQILPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFHRNKYICPDKQ--- 830
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
K G GE + G+KK Y GGLV EP++G YDKF+++MDFNSLYPSIIQE+NICFT
Sbjct: 831 -KFRGRGQGEDDNADGKKKDKYKGGLVFEPERGLYDKFVLVMDFNSLYPSIIQEFNICFT 889
Query: 665 TIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
T+ L SD +P Q G+LP I LV RRQVK+LMK +++ L +
Sbjct: 890 TVERAAL--SDEGDAVPEVPTEQ-SQGVLPRLIATLVSRRRQVKSLMKDKTATAEELATW 946
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGD 784
DI+Q ALKLTANSMYGCLG+ SRF+A+PLA LVT KGREIL +TK L E+++ +VIYGD
Sbjct: 947 DIKQLALKLTANSMYGCLGYTQSRFYARPLAVLVTYKGREILRSTKELAESMSLQVIYGD 1006
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQL-ELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+MI+ NV++ ++G + K N+ Y+ L DID V++ +LL KKKYAA+++
Sbjct: 1007 TDSVMINANVDNVADAMRVGQEFKRTVNERYRLLGGFDIDNVFRRILLQAKKKYAAINMV 1066
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
++ GK + E+KG+D+ RR++ L+ E ++++IL + T+ S+ + E
Sbjct: 1067 EV-GGKYVEKMEVKGLDMKRREYCALSKEMSTRILNEILSGEE-TEVSVTRIHAYLREMA 1124
Query: 904 KKIR------TDLDNGF---------VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
K+R T+ +NG +P I QL K P +Y + + +P VQVALR
Sbjct: 1125 AKMRGTSSDETEDNNGTTTTTTTASSIPAAKYIIFTQLGKEPTDYPNAETMPQVQVALR- 1183
Query: 949 NNTNSKKLKQGDTISYIICEDG---TSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIH 1004
+ +K+ +GD +SY+I TSE A +RAY + ++ + +S L DV +Y+ +QI
Sbjct: 1184 ERSQGRKVSKGDVVSYLIATGTSAPTSEPAAKRAYTLADVQRKDSGLTPDVEWYIGKQIF 1243
Query: 1005 PVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGV-GEAEE------- 1056
P V RL I GT ++AE LGLD Y + Q +GV GE E
Sbjct: 1244 PPVERLCANIVGTSTAQLAENLGLDMRRYAAGGGGQGQHGSNGGMGVNGELMEVHPLESQ 1303
Query: 1057 ----VKYQFCDKFEFTCMNPSCKQVNTVE------APTRLSTHGVVFVLDECINPECKVP 1106
V+++ C + + C CK + E + + V + +C
Sbjct: 1304 IPDAVRFRDCARLQLRCRK--CKATDQFEGLWSEDGEQTIQAEKAMHVTPAGVACKCGAA 1361
Query: 1107 PYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR-------RC--PLGLKTRLC 1157
T ++ ++ + +YYEGWL C+DP C TR RC P GL R C
Sbjct: 1362 LSTL--SVVAQVEHAVRMATSRYYEGWLVCDDPSCGQRTRQMSVYGTRCLGPKGL-ARDC 1418
Query: 1158 TTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSE---------TYMG 1208
+Y++ E +Y QL ++ + D+ KA T + D + +
Sbjct: 1419 LGRMRYEMG----ERDIYNQLVYYAGLFDVDKARTAVLAAAADKDEQDRVLALAEHNRVR 1474
Query: 1209 YCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ +K VER+L+ V + LF+
Sbjct: 1475 FGNVKAAVERYLDKCGRRWVAMDTLFA 1501
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 236/543 (43%), Gaps = 77/543 (14%)
Query: 61 FQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYVED 117
F++L+ L+ G K YE + +YE V + +Y V R +DD++ DD G+GY +D
Sbjct: 11 FEELRALRKAGKKAFDSYEVEDADKLYELVDDDQYKNIVRSRLNQDDFVVDDNGEGYADD 70
Query: 118 GRE------IFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGD-----IQKLLANMPVKKK 166
GRE +++ D +D + K D++ K+ + AK D I + K +
Sbjct: 71 GREEWDRAHVYESDSDDNMVARTK-DRKSSKKSREEDQAKRDANDRNIAEYFTKGAAKPQ 129
Query: 167 KKEEVQLNNDD--VLADLLSEVNTTIAPTLKLNTKTNEIV-----------------IPK 207
K +V + DD +A LL EV+T + L + K V +PK
Sbjct: 130 AKTKVVVTKDDDSFMASLLDEVDTNLPTALPVIKKKKRTVDQRKSRDFSPPAGIRQPLPK 189
Query: 208 ----EEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQ 263
E PPAP AN S + + E P D+I +D + +
Sbjct: 190 RAKVELPPAP------ANISFADDDDDDDFAALHDENIPASDDIPMSDPMPSSPTVQVAR 243
Query: 264 SKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSI-EEKVDVTNVESV 322
K +P ++Q + E+ + + +E + ++ V+++ +
Sbjct: 244 RKAQPAQA------------VAEQITTIKEEEDEDDGMMEVAHAGAVTAASVNLSAARPL 291
Query: 323 SSAV--ELSTSPPPQVVEKKEHKCAEWEA------IQTEPSTSEPQVHSRTADDSLPLAT 374
V EL SP V + + + W + + P T+E + H+ A
Sbjct: 292 KKLVKEELFLSPTKAAVAEDKVDASAWNKLNDKLNVMSSPKTAEAESHTMGGKVDYKDAI 351
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
+ + F+ + +I+ G++ LFGKV K+ H S + + NI RK++ LPR
Sbjct: 352 EQDGS---LNFYWTDYTEIH---GSLCLFGKVLNKKTKKHVSSFLKIDNIQRKLFFLPRQ 405
Query: 435 EHLK----TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
+ T + VS+A VY E D + T+ + K++ +KYAF LP +P YL++
Sbjct: 406 RRSQDGEETGDEVSMADVYGEVDALMTKMGVPQHKTKPCTRKYAFELPNIPKEGRYLKLL 465
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCK 549
Y P + ++ G T+SHVFGT ++ E +L + + GP WL+ +A + S CK
Sbjct: 466 YPYTKPVI-AEAGGVTYSHVFGTNTALFEQFVLWKNVMGPCWLKIEDANYSALKNASHCK 524
Query: 550 YEV 552
EV
Sbjct: 525 LEV 527
>gi|308806656|ref|XP_003080639.1| DNA-directed DNA polymerase alpha catalytic subunit, putative (ISS)
[Ostreococcus tauri]
gi|116059100|emb|CAL54807.1| DNA-directed DNA polymerase alpha catalytic subunit, putative (ISS)
[Ostreococcus tauri]
Length = 1530
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/525 (43%), Positives = 326/525 (62%), Gaps = 34/525 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE-GEETGEANKGK 619
+++N+ GN+ S+TL R++R E+LLLH FH++ ++LPD+ K ++ G+
Sbjct: 819 QLSNIAGNLWSKTLGHTRAQRVEYLLLHEFHKRKHILPDRLSSKERRRVAAVNGDEEDDG 878
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
G+K +Y+GGLVLEPKKG YD F++++D+ SLYPSIIQEYNIC+TT+ R D D T+
Sbjct: 879 GKKGPSYAGGLVLEPKKGLYDDFVLVLDYQSLYPSIIQEYNICYTTVK-RHFNDGDDPTI 937
Query: 680 CEYLP---EHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM--QYDIRQKALKLT 734
LP + D +LP+ I +V SR+ VK LM + SD QYD+RQ ALKLT
Sbjct: 938 --QLPPSVSNDKDFAVLPAVIASIVRSRKDVKGLMAK---ESDPARKKQYDLRQLALKLT 992
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV-ENLNYEVIYGDTDSLMISCN 793
ANSMYGCLGF SRF+A+ +AAL+T++GR IL +T L + + +VIYGDTDS+M++
Sbjct: 993 ANSMYGCLGFSQSRFYAEAIAALITSQGRTILQHTVDLARQKCDLDVIYGDTDSIMVNTG 1052
Query: 794 VNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICS 853
+ D GN++ N+ Y++L L+ D ++ MLLLKKKKYAA+ + NG +
Sbjct: 1053 TKNLDQARAAGNKLIRFVNREYRKLVLEEDYAFRSMLLLKKKKYAAMKVVNGPNGTKMTE 1112
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
E+KG+D+VRRDW+ L E GK Q L+E D L++R+ IH+ +++IR ++
Sbjct: 1113 LEMKGLDIVRRDWAPLVKEIGK----QTLEELLEVDGELEERVTAIHDLLREIRVEMVAN 1168
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVA-LRLNNTNSKKLKQGDTISYIIC----- 967
VPL ITKQLTKA EEY D K PHV VA RL ++ G+T+ YII
Sbjct: 1169 RVPLDKYIITKQLTKAVEEYPDAKHQPHVMVAKRRLEAGKQDGVRAGETVPYIIAMESDA 1228
Query: 968 --EDGTSEAA--------TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
ED S A +RAY+ +E+K + LKID++YYLSQQ+HPV++RL PIE T
Sbjct: 1229 SLEDIASGKAGATGGKGLAERAYHPDEVKERN-LKIDLHYYLSQQVHPVISRLCAPIEET 1287
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFC 1062
D ++AECLG+D++ ++SQ +E G ++ ++ C
Sbjct: 1288 DGAKMAECLGMDSNKFKSQSREDDLDDGSGGGVFGLDDQERFHDC 1332
Score = 93.2 bits (230), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 144/562 (25%), Positives = 221/562 (39%), Gaps = 130/562 (23%)
Query: 77 EFTADENVYEEVSEKEYTERVLKRQED--DWIDDDGGDGYVEDGRE--------IFDDDI 126
E A ENVY+E+ E Y V KR+E D++ +D G+GY + G E + DD
Sbjct: 40 EADAIENVYDELDEDAYRALVAKRREAGVDFVVNDAGEGYDDLGEEEDWTTANPNYSDDE 99
Query: 127 EDVPQKKEKHDKRKKNKNIQN------PNAKGDIQKLLANMPVKKKKKEEV--QLNNDDV 178
ED P+ K KK K + +L KKKK +EV + D +
Sbjct: 100 EDAPKAKGAKATEKKAKATADEKAAKANAKAKGNAGMLLGGVQKKKKLDEVAADADADAI 159
Query: 179 LADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKV------EKKI 232
L D+ +EV+ N T V+ + P S P K+ +
Sbjct: 160 LEDIFAEVDM-------FNASTPATVLARRAAPVAATAPVAPRRS-PRKIAQATAAAANV 211
Query: 233 EKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVL 292
P+K +PSP K ++ E ++EP G D DN + +
Sbjct: 212 RSPVKADPSPAKKSVR------------FETEEDEPAPQGDIGGFDDD--DNDVDLDEAM 257
Query: 293 PEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQT 352
PE ++ I++ D N +SV A + P PQ + K + E + T
Sbjct: 258 PE-------VDPIDT-------DEPNYKSVEIAKAVQ-PPAPQSILKTLDEDEHEEDLAT 302
Query: 353 EPSTSEPQVHS-----RTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVF 407
+ P + + AD S+P FF+DA E+ + PGTV+LFG+V
Sbjct: 303 ITQDAAPVTFNGVELPKDADGSIPF------------FFMDAHEE-RESPGTVFLFGRVP 349
Query: 408 VKENNSHS--SCCVIVQNIDRKIYLLPRS------------------------------- 434
V S C +VQN++R +Y++P +
Sbjct: 350 VSSEPGAETISACAVVQNMERCMYVIPTASTFDDPDDELMELADKMDEARRKFKTCTDAD 409
Query: 435 --------------EHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGV 480
+ +K P S A + +E ++ + I + K + + Y F +
Sbjct: 410 KLEEAKVAAQKAKADLMKRLVPKSGA-LRAEIKELLKKRGIENSKITIVRRHYCFERKDI 468
Query: 481 PDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
P S + L+V+ A A PSDL G F + GT++ LE L L+ K+KGPSW+ A
Sbjct: 469 PHGSLFVLKVKTPATQSAFPSDLKGTNFIAMMGTQAPMLELLTLKSKLKGPSWISLHGAS 528
Query: 540 KFPS--RISWCKYEVQCNQMEK 559
PS + SWCK E+ K
Sbjct: 529 IVPSEKQKSWCKLEMSIPHAHK 550
>gi|406606821|emb|CCH41857.1| DNA polymerase alpha subunit A [Wickerhamomyces ciferrii]
Length = 1452
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 246/651 (37%), Positives = 371/651 (56%), Gaps = 33/651 (5%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK---------KEGEE 611
++TN+ GN + TL G R+ RNEF+LLH F+ Y++PDK+ + + + E+
Sbjct: 762 QLTNLAGNAWAHTLGGTRAGRNEFILLHEFNRNDYIVPDKETRQQRLAHQQQYQQQSSED 821
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML 671
+ KK+ Y GGLV EP+KG + +I++MDFNSLYPSIIQE+NICFTT+ +
Sbjct: 822 GNDEQVSNNNKKSKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEFNICFTTVDRDL- 880
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
++I TL + +P D G+LP + LV RR+VK LMK P + QYDI+Q+AL
Sbjct: 881 --NNIETLPD-VPPTGSDQGVLPRLLSTLVNRRREVKKLMKDPTATMIEKAQYDIKQQAL 937
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMIS 791
KLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E+L V+YGDTDS+MI
Sbjct: 938 KLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAESLGLRVVYGDTDSVMID 997
Query: 792 CNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
N +D KIG K + N+ Y+ LE+DID V+K +LL KKKYAA+++S G+
Sbjct: 998 TNCDDIKDATKIGEDFKIKVNERYRLLEIDIDNVFKRLLLHAKKKYAAMNVSFDKMGQEN 1057
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
E+KG+D+ RR++ L+ E +V+ +IL +D + L I+ +++ + + +
Sbjct: 1058 SVLEVKGLDMKRREYCPLSKEISIYVLEKIL-----SDLDPELALNEIYSYLEDMTSKIK 1112
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
N + +I +L+K P Y K +P VQVALRL K +K G I+++I E G
Sbjct: 1113 NNEIRADKFKINTKLSKDPSSYPGAKNMPAVQVALRLRE-QGKVIKAGSVITFVITE-GE 1170
Query: 972 SEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
+ +RA + E L S LK D N+YL +QI V RLLE IEG D VR+A+ LGL+
Sbjct: 1171 EGSPAERARALAELLPKTSTLKPDANHYLEKQIFAPVERLLERIEGFDVVRLAKSLGLE- 1229
Query: 1031 SLYRS-QIKESIQQSEENILGVGEAEEVKYQFCDKFEFT---CMNPSCKQVNTVEAPTRL 1086
+RS Q+ + I G+ + E ++F+ + +N C
Sbjct: 1230 --HRSKQLSNRSNNTNGGINGILQPLESTISDAERFKLSKHLYLNCKCGSHFKFGGIVSS 1287
Query: 1087 STHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTR 1146
+ + + F +C +C T ++ ++L Q + +I KYY+G + C+D C +T+
Sbjct: 1288 NDYQMTFNGIQC--KKCMNQLNTL--NVTSQLEQRIRSFISKYYQGIVICDDSTCGMITK 1343
Query: 1147 RCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTP 1197
+ + K L C K + Y++ +LY QL +F + D+ K +S P
Sbjct: 1344 QISVYGKRCLSNGC-KGVMRYQYSDKELYNQLLYFDSLFDVEKNKNQSLRP 1393
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 16/190 (8%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
++ K F+M++LD E T+ LFGKV + S V V+N +R+++ LPR
Sbjct: 319 DDSKSFKMYWLDYTE----VENTLILFGKVLTTDK-QLVSAMVQVKNFNRELFFLPRDYR 373
Query: 437 L----KTKEPVSIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY 491
L T E V+ + V E I QY + ++++ +KYAF +PG+P +YL++
Sbjct: 374 LVDGEATDEAVTPSDVRDEIQPLILEQYGLTSLRTKEETRKYAFEMPGIPKEKDYLKILL 433
Query: 492 SAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRI 545
+ P LPSDL G+TFSHVFGT ++ E +L+R I GP WLE A
Sbjct: 434 PFQPPKNAKKTLPSDLEGETFSHVFGTSANIFETFVLQRNIMGPCWLEIKNANFDDVKNT 493
Query: 546 SWCKYEVQCN 555
S CK EV N
Sbjct: 494 SHCKLEVSVN 503
>gi|50305661|ref|XP_452791.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641924|emb|CAH01642.1| KLLA0C13255p [Kluyveromyces lactis]
Length = 1430
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 247/661 (37%), Positives = 371/661 (56%), Gaps = 46/661 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
+ +Q + K ++TN+ GN +TL G R+ RNE++LLH F+ Y++PDK+ + K++
Sbjct: 726 FRIQILSLTK-QLTNLAGNGWRQTLGGTRAGRNEYILLHEFNRNDYIVPDKETRQMKQDR 784
Query: 610 EETGE--ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
++ E KK+ Y GGLV EP+KG + +I++MDFNSLYPSIIQE+NICFTT+
Sbjct: 785 QQKNEDPMEPQVSSKKSKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEFNICFTTVD 844
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
R QD++ +P + G+LP + LV+ RR+VK LMK N +S QYDIR
Sbjct: 845 -RNPQDNE---ELPDVPSREKSRGVLPRLLANLVQRRREVKNLMKTENDASKK-AQYDIR 899
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E+L V+YGDTDS
Sbjct: 900 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESLGLTVVYGDTDS 959
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MIS ++Y KIG K N+ Y LE+DID ++K +LL KKKYAAL+++
Sbjct: 960 VMISTGCDNYMDAIKIGENFKKLVNERYSLLEIDIDNIFKRLLLHAKKKYAALNVTFDKQ 1019
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
+ E+KG+D+ RR++ L+ E V++ +L +D + LQ I+ +M++IR
Sbjct: 1020 NNEKTTLEVKGLDMKRREFCPLSKEVSTRVLNILL-----SDKDSESALQEIYAYMEEIR 1074
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++N + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1075 QKVENNEIRMDKYKINTRLSKDPKSYPGGKNMPAVQVALRMREA-GRVVKAGSVITFVIT 1133
Query: 968 EDGTSEA-------ATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+ +RA + E+ N + LK D YYL +QI V RLLE IE D
Sbjct: 1134 KGSDDSDQDSDQANVAERARALNEVMNKKNGLKPDPVYYLGKQIFSPVQRLLERIESFDI 1193
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDK--------FEFTCMN 1071
+R++E LGLD+ Y I E N G+ + ++ D+ E TC
Sbjct: 1194 IRLSEALGLDSRKY---INRGGANGELNGRGMDTLQPLETTISDEERFRDSVPLELTC-- 1248
Query: 1072 PSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYE 1131
P+C + V+ +C N + P + ++L + + +I YY
Sbjct: 1249 PNCDTKFVYGGIVASKEYRFVYSGIQCSNCNHIMTPI----QVTSQLERIIRAHISLYYA 1304
Query: 1132 GWLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDIT 1188
GW+ C+D C ++TR+ + K L CT YK Y++ QLY Q+ +F + D+
Sbjct: 1305 GWVACDDSTCGNITRQISVFGKRCLLDGCTGVMSYK----YSDKQLYNQMLYFQSLFDLQ 1360
Query: 1189 K 1189
K
Sbjct: 1361 K 1361
Score = 116 bits (290), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 137/540 (25%), Positives = 235/540 (43%), Gaps = 85/540 (15%)
Query: 81 DENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDG-------REIFDDDIEDVP 130
+ENVY+ + E +Y R KRQE DD+++DD G GYV+ G +E + D+ + V
Sbjct: 32 EENVYDLIDEDQY--RSKKRQELLRDDFVEDDDGSGYVDRGVDEWDQSQEFYSDEDDGVD 89
Query: 131 QKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKK------KKEEVQLNN-DDVLADLL 183
K K K+NK +N K I ++ VK+K K ++V L DD+L++
Sbjct: 90 AKSGK----KRNKTSKNNKGKDTISDIIKQQNVKRKMTMPTEKPKKVSLAEFDDILSEFD 145
Query: 184 SEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIK-KEPSP 242
+E P +K ++ I +++P T Y K + P+K K+ P
Sbjct: 146 AE------PLVK----KPKLTISRKQPANTTPMNY--------KHPQVDTSPLKGKDVVP 187
Query: 243 LKDEIKSNDSVMEVEMNVAEQSKE-EPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQ 301
K DSV ++ + E+ + E + + + + Q D ++ +
Sbjct: 188 FKA-----DSVNPIDCDSMEEDHDIESLLNDVASSPSMSKQKTYQSEDDSEDDEDDIHFG 242
Query: 302 IEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQV 361
+ +S + + ++++ S+ TS P V + Q S S
Sbjct: 243 RKKFKSIATQRQMNI------SAQTAPLTSSPTYVTAPNTPLSTSTGSTQATESISGSLR 296
Query: 362 HSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIV 421
+D + T N FF F ++ ++ LFGKV ++N S+ I
Sbjct: 297 QRIPKEDVVDAETGSFN------FFWTDFTEVN---SSLILFGKVKTRKNQVVSAMAQI- 346
Query: 422 QNIDRKIYLLPRSEHLKTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPGV 480
+R++Y LP KE + + V+ E + +Y + +++ KKYAF LPG+
Sbjct: 347 NGFNRELYFLP-------KEGKTASDVHQEIVPLLLDKYGLQSLRAKPETKKYAFELPGI 399
Query: 481 PDLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEF 535
P +EYL+V P +P++L GDTFSHVFG + E+ +++RKI GP WL+
Sbjct: 400 PHEAEYLKVLLPYDTPKCKSITIPAELEGDTFSHVFGGNQNLFESFVVQRKIMGPCWLKI 459
Query: 536 PEAE-KFPSRISWCKYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLL 587
+ + S C EVQ + I TN C ++ +T+M + + E + +
Sbjct: 460 SDGDFDAVQGASHCAIEVQIDSPNHISATNEKSSPSLNCISLSIQTVMNAKENKQEIVAI 519
>gi|50288441|ref|XP_446650.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525958|emb|CAG59577.1| unnamed protein product [Candida glabrata]
Length = 1454
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 257/658 (39%), Positives = 374/658 (56%), Gaps = 41/658 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKK 607
+ +Q + K ++TN+ GN S+TL G R+ RNE++LLH F Y++PDK Q +N++
Sbjct: 752 FRIQILSLTK-QLTNLAGNAWSQTLGGTRAGRNEYILLHEFARNGYIVPDKETQKMRNQR 810
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ G KK+ Y GGLV +P+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 811 LRAQDGSDEPEGSSKKSKYQGGLVFDPEKGLHTNYVLVMDFNSLYPSIIQEFNICFTTV- 869
Query: 668 VRMLQDSDITTLCEY--LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
D D+ + E +P G+LP + LVE RR+VK +MK L Q D
Sbjct: 870 -----DRDVENIDELPEVPSADKAQGVLPRLLANLVERRREVKKIMKTETDPHKRL-QCD 923
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDT 785
IRQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDT
Sbjct: 924 IRQQALKLTANSMYGCLGYVNSRFYARPLAMLVTNKGREILMNTRQLAESMNLIVVYGDT 983
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
DS+MI N ++Y KIGN K+ N+ Y+ LE+DID V+K +LL KKKYAAL++S
Sbjct: 984 DSVMIDTNCDNYHDAIKIGNNFKTLVNERYRLLEIDIDNVFKKLLLHAKKKYAALNVSIN 1043
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
GK E+KG+D+ RR++ L+ + V++ IL +D + LQ ++ +++
Sbjct: 1044 KEGKEETVLEVKGLDMKRREFCPLSRDISIHVLNTIL-----SDKDPETALQEVYYYLED 1098
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
+R ++ + + +I +L+K P Y K +P VQVALR+ T + +K G I+Y+
Sbjct: 1099 MREKIEKDEIRVDKYKINTKLSKDPSAYPGGKNMPAVQVALRMRKT-GRMVKAGTVITYV 1157
Query: 966 I-----CEDGTSEAA---TQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
I E+G + A +RAY + E + S L+ D +YL +QI+ V RLLE I+
Sbjct: 1158 ITKPAEVENGEASGAQSVAERAYALNEVMMKGSNLRPDPEFYLEKQIYAPVERLLERIDS 1217
Query: 1017 TDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQ-FCDKFEFTCMNPSCK 1075
D+VR+ LGLD+ Y + S N L E + F D P+CK
Sbjct: 1218 FDSVRLISALGLDSKKYLRRGGIDGHGSNSNELEPLETTISDMERFKDSSNLILNCPNCK 1277
Query: 1076 QVNTVEAPTRLSTHGVVF--VLDECINP-ECKVPPYTYLP-HLINKLSQDMNKYIVKYYE 1131
+ E P G+V C N +CK Y + P + +L + + +I YY
Sbjct: 1278 K----EFP----YGGIVASNYYQHCYNGLQCKSCDYLFSPLQMTCQLERAIRSHISLYYA 1329
Query: 1132 GWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
GWL+C+DP C ++TR+ + K L C +H YT+ QLY QL FF + D K
Sbjct: 1330 GWLQCDDPTCGNVTRQLSVFGKRCLNDGCTGV-MHYRYTDKQLYNQLLFFDSLFDCDK 1386
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 142/563 (25%), Positives = 257/563 (45%), Gaps = 58/563 (10%)
Query: 56 NKFAAFQKLKDL-KGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE---DDWIDDDGG 111
+K A +KL+ L KG+ + + + +Y+E+ EKEY R KRQE DD++ DD G
Sbjct: 6 DKLAKLKKLQALRKGKNANDEDDEDNYDKIYDEIDEKEYRNR--KRQELLRDDFVVDDDG 63
Query: 112 DGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-GDIQK------LLANMPVK 164
GYV+ G E + ED E + K Q P + GD+ K +L+ +
Sbjct: 64 LGYVDRGVEEEFNSEEDYSSNDELDNSTSKGNKKQQPKKQIGDMLKAHHSKVVLSGKQLD 123
Query: 165 KKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
KKK+ ++L++ D D+L+E + L + N ++ K L +F
Sbjct: 124 SKKKQ-IKLDDFD---DILNEFDNEEDEKPILTHRKNASLLSSSPTVKTAMKRSLNDFDS 179
Query: 225 PIKVEKKIE-KPIKKEPSPLKDEIKSN---DSVM--EVEMNVAEQSKEEPV-DDGLWEQM 277
++I+ K + SPLK++IK++ +S+ + +N E S V D L +
Sbjct: 180 SDNENRRIKNKRVDMNSSPLKNQIKNSIPSESLGGGDTAVNSLETSPTRHVQDSSLLNAV 239
Query: 278 QID-DWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQV 336
+ + + D+S ++ V + + + + KV++ + ++SS+ ++T P
Sbjct: 240 KSEFEQDSSTNIDSDDSDEDNVIVTKRKMRTATAVRKVNLDSKSALSSSPYVTTPGTPIT 299
Query: 337 VEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQ 396
KK + + P Q T D + T F+M++ D F ++
Sbjct: 300 ENKKSIGSSVASYSMSGPLNFATQKF--TKDQIIDPQTG-----TFKMYWFD-FTEVN-- 349
Query: 397 PGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIA 456
T+ LFGK+ + H S + + + R++Y LPR + ++P I + +
Sbjct: 350 -NTLVLFGKIKLL-TGEHVSAMIQIDGMCRELYFLPR----EGRKPEEIHEEIIPL--LM 401
Query: 457 TQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVF 511
+Y + + +++ KYAF LPG+P S+YL+V P +P DLS +TF HVF
Sbjct: 402 DKYGLPNIRAKPEHMKYAFELPGIPHESDYLKVLLPFNTPKSSRDTIPPDLSSETFHHVF 461
Query: 512 GTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQMEKIRITNV---- 565
G ++ E+ +++ KI GP WLE + F + S EV N+ + I+ ++
Sbjct: 462 GGNTNIFESFVVQNKIMGPCWLEIKGGD-FSALQNASHTSIEVLINRPQDIKPIDIKEMP 520
Query: 566 ---CGNVLSRTLMGGRSERNEFL 585
C ++ +T+M + + E +
Sbjct: 521 ELHCTSISIQTVMNPKQNKQEIV 543
>gi|401623954|gb|EJS42033.1| pol1p [Saccharomyces arboricola H-6]
Length = 1468
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 252/662 (38%), Positives = 376/662 (56%), Gaps = 49/662 (7%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
+ +Q + K ++TN+ GN ++TL G R+ RNE++LLH F Y++PDK+ G+N+ +
Sbjct: 766 FRIQLLSLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGYIVPDKEGGRNRTQR 824
Query: 610 EETGEANKG--KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
++ + N K KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 825 QKQNDENASAPKNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 884
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +V G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 885 ---RNKEDIDELSN-VPPSEVSQGVLPRLLANLVDRRREVKKVMKT-ETDPHKRVQCDIR 939
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 940 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 999
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL++S N
Sbjct: 1000 VMIDTGCDNYADAIKIGLGFKKSVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVSLDKN 1059
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++E+++ IR
Sbjct: 1060 GNETTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYEYLEDIR 1114
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
T ++ + + +I +L+K P Y K +P VQVALR+ + +K G I+++I
Sbjct: 1115 TKVEANNIRIDKYKINMRLSKDPTAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1173
Query: 968 EDGTSE--------AATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ G + + +RAY + E +K N+ LK D YYL +Q+ V RLLE I+
Sbjct: 1174 KQGETSDDENTPAPSVAERAYALNEVMIKGNN-LKPDPQYYLEKQLFAPVERLLERIDSF 1232
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQ-FCDKFEFTCMNPSCKQ 1076
+ VR+ E LGLD+ Y + + + N L E + F D + PSC Q
Sbjct: 1233 NVVRLTEALGLDSKKYFKREGANGNGGDANNLQPLETTVTDIERFKDTVILELICPSCDQ 1292
Query: 1077 VNTVEAPT-----RLSTHGVVFVLDECINPECKVPPYTY-LPHLINKLSQDMNKYIVKYY 1130
R+S +G+ +CK ++ L +++ + +I YY
Sbjct: 1293 QFPFGGIVSSNHYRMSYNGI----------QCKHCEQSFSFIQLSSQIEHSIRAHISLYY 1342
Query: 1131 EGWLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDI 1187
GWL+C+D C +TR+ + K L CT +YK YT+ QLY QL +F + D
Sbjct: 1343 AGWLQCDDSTCGVVTRQLSVFGKRCLNEGCTGVMRYK----YTDKQLYNQLLYFDSLFDC 1398
Query: 1188 TK 1189
K
Sbjct: 1399 EK 1400
Score = 106 bits (264), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 149/562 (26%), Positives = 251/562 (44%), Gaps = 100/562 (17%)
Query: 84 VYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYV---------EDGREIFDDDIEDVPQ 131
+Y+EV EKEY R KRQE DD++ DD G GYV EDG D+D ED
Sbjct: 36 LYDEVDEKEYRAR--KRQELLHDDFVVDDDGLGYVDRGVEEDWREDGNNYIDEDDEDSGS 93
Query: 132 KKEKHDKRKKNKNIQNPNAKGDIQK-------LLANMPVKKKKKEEVQLNN-DDVLADLL 183
K KRKK + + D+ + LL + KK +K+ + +++ DD+L +
Sbjct: 94 LASKDAKRKKGLKKEKDHPITDMLRTQHSKSTLLTH--AKKAQKKSMAIDDFDDILGEFE 151
Query: 184 S----EVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKE 239
S + T+ L+ N ++ P+ K + + + K +K +
Sbjct: 152 SGEAEKPKVTLPAKLRANLNSS---------PSADFKSSVKRLNGSSNNNTSMAKRVKID 202
Query: 240 PSPLKDEIKSNDSVMEVEMN-VAEQSKEEPVDDGLWEQMQIDDWDNSQ--------QTQD 290
P S D +E+ + + QS+++ + + Q +DD +NS Q ++
Sbjct: 203 PD------SSTDKYLEINSSPLKSQSRKQRYANDV--QDLLDDVENSPVMANKKLIQPEN 254
Query: 291 VLPE-----QAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCA 345
+L E Q+ V+ + + I K + +V + + V L + P A
Sbjct: 255 ILVENPPSSQSLVDGDDDDSDDDIILRKRTMRSV-TATKRVNLDSRSNPST---SPFVTA 310
Query: 346 EWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKV-------FRMFFLDAFEDIYKQPG 398
I T P SR + D+ L + + V F+MF+LD E
Sbjct: 311 PGTPIGIRAPT--PTKPSRVSTDATVLTASVKKEDVIDPETDSFQMFWLDFCE----VNT 364
Query: 399 TVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEF-DQIAT 457
T+ LFGKV ++ N+ + S V V + R+++ LPR + K P A V+ E +
Sbjct: 365 TLILFGKVKLR-NDKYVSAMVQVNGLCRELFFLPR----EGKTP---ADVHEEIIPLLMD 416
Query: 458 QYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFG 512
+Y + + +++ + KY+F LP +P ++YL+V + P +PSDLS DTF HVFG
Sbjct: 417 KYGLDNIRAKPQKMKYSFELPDIPSENDYLKVLLPYQTPKSSRDTIPSDLSSDTFHHVFG 476
Query: 513 TKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCKYEVQCNQMEKIRITNV------ 565
++ E+ +++ KI GP WLE A+ R S C EV ++ + I + N+
Sbjct: 477 GNANIFESFVIQNKIMGPCWLEIKGADFNAVRNSSHCAIEVFVDKPQNI-VPNITKTMPD 535
Query: 566 --CGNVLSRTLMGGRSERNEFL 585
C ++ +TLM + + E +
Sbjct: 536 LRCLSLSMQTLMNPKENKQEII 557
>gi|410078800|ref|XP_003956981.1| hypothetical protein KAFR_0D01990 [Kazachstania africana CBS 2517]
gi|372463566|emb|CCF57846.1| hypothetical protein KAFR_0D01990 [Kazachstania africana CBS 2517]
Length = 1449
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 252/665 (37%), Positives = 373/665 (56%), Gaps = 52/665 (7%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
+ +Q + K ++TN+ GN S+TL G RS RNE++LLH F YV+PDK+ + + +
Sbjct: 744 FRIQLLSLTK-QLTNLAGNAWSQTLGGTRSLRNEYILLHEFARNGYVVPDKESRQARTQR 802
Query: 610 EETGEANKGKG---RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI 666
+ AN KA Y GGLV +P+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 803 MKKNSANDADDTAPSSKAKYQGGLVFDPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTV 862
Query: 667 PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
+ DI + E E V G+LP + LV RR+VK +MK + L Q DI
Sbjct: 863 QRNL---HDINEMPEVPGEDNVQ-GVLPRLLANLVARRREVKKIMKT-EMDPHKLAQCDI 917
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTD
Sbjct: 918 RQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTD 977
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI + Y KIG K N+ YK LE+DID V+K +LL KKKYAAL++S
Sbjct: 978 SVMIDTGCDSYADAIKIGQNFKRLVNERYKLLEIDIDNVFKRLLLHAKKKYAALNVSIDK 1037
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
G E+KG+D+ RR++ L+ + +V+S +L +D + LQ I+ ++++I
Sbjct: 1038 AGNENTVLEVKGLDMKRREFCPLSKDVSTYVLSHLL-----SDKDPETALQEIYAYLEEI 1092
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ ++N + +I +L+K P Y K +P VQVAL++ + +K G I+++I
Sbjct: 1093 KSKVENNQIRADKYKINTKLSKDPSAYPGAKTMPAVQVALKMRKA-GRVVKAGSVITFVI 1151
Query: 967 C----------EDGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
+DG + +RAY + E +K+N+ L D +YYL +QI V RLLE I
Sbjct: 1152 TKQNDGANDGKKDGETMHFAERAYALNEVMIKSNN-LVPDPDYYLEKQIFSPVERLLERI 1210
Query: 1015 EGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGE---AEEVKYQFCDKFEFTCMN 1071
EG D VR++ LGL++ + + + + + N L E ++ ++ E +C
Sbjct: 1211 EGFDVVRLSNALGLESKKFLKRYNDDVTGNSINNLQPLETTISDVERFATSAILELSC-- 1268
Query: 1072 PSCKQVNTVEAPTRLSTHGVVF--VLDECINP-ECKVPPYTYLP-HLINKLSQDMNKYIV 1127
P C + + G+V C N +CK + P L +L + +I
Sbjct: 1269 PMCSK--------QFPFGGIVASNYYKMCFNGIQCKGCDHILSPIQLTAQLEATIRVHIS 1320
Query: 1128 KYYEGWLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYI 1184
YY GWL C+D C +TR+ + K L CT +YK Y++ QLY QL +F +
Sbjct: 1321 LYYAGWLICDDLACGTVTRQMSVFGKRCLNEGCTGVMRYK----YSDKQLYNQLLYFDSL 1376
Query: 1185 CDITK 1189
DI K
Sbjct: 1377 FDIEK 1381
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 260/582 (44%), Gaps = 100/582 (17%)
Query: 55 TNKFAAFQKLKDLKGQGVKHKYEFTADE----NVYEEVSEKEYTERVLKRQE---DDWID 107
++K A +KL+ + +G T+DE VY+EV EK+Y + LKR++ DD+I
Sbjct: 3 SDKLAKLKKLQAAR-KGKAETTNSTSDEEDFDRVYDEVDEKQYLD--LKRKQLLQDDFIV 59
Query: 108 DDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKN--------------IQNPNAKGD 153
DD G GYV+ G E DD I +++D + N I +
Sbjct: 60 DDDGVGYVDRGVE--DDSI----YYSDEYDNEDYSSNKKKKRKEPRKEEHQIGSLLRSQH 113
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+K+LA+ K KK DD+L + S+ N A KL K +P P A
Sbjct: 114 TRKILASSNSIKPKKAIAVDEFDDILGEFDSD-NMKDAQRNKLQVK-----LP-SSPTAQ 166
Query: 214 TAKEYLANFSKPIKVEKKIEKP-IKKEPSPLKDEI---KSNDSVMEVEMNVAEQSKEEPV 269
A++ L N + ++KP I+ SPLK++I K NDS+ ++ +V + P
Sbjct: 167 AAQKRLLNQA----AGSILKKPKIEMNSSPLKNQIANSKINDSLDDLLHDV----EASPT 218
Query: 270 DDGLWEQMQIDDWDNSQQTQDV--------LPEQAKVELQIEAIESQSIEEKVDVTNVES 321
+++ + D + T V ++ + + S ++ +V+ + +
Sbjct: 219 MVKKTKEISQTETDINSSTTGVGKTARSDDEDSDDELIFKRRPLRSANVSRQVNFNSKSN 278
Query: 322 --VSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHS--RTADDSLPLATDHE 377
S V +P Q ++ K + + SEP S + + + ATD
Sbjct: 279 PGTSPFVTAPGTPINQGLKNTSKKTLHY-------TLSEPLEFSFKYSKNQIIDPATDS- 330
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL 437
F+MF+LD E ++ LFGKV + N S V + ++R+++ LPR H
Sbjct: 331 ----FQMFWLDFVE----INNSLILFGKVKANDGN-LVSAMVQINELNRELFFLPREGH- 380
Query: 438 KTKEPVSIAQVYSEFDQIATQ-YKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP 496
S A+++ E + + Y + + +++ + KYAF LP +P +EYL+V CP
Sbjct: 381 ------SAAEIHEEIIPLLMEKYGLANIRAKPQKMKYAFELPDIPHETEYLKVLLPFNCP 434
Query: 497 A-----LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCK 549
+P DL +TFSHVFG S+ E+ +++ KI GP WLE + F S S C
Sbjct: 435 KNSNDLIPPDLCSETFSHVFGGNSNIFESFVVQNKIMGPCWLEIKNGD-FSSLKNASNCS 493
Query: 550 YEVQCN-----QMEKIRITNV-CGNVLSRTLMGGRSERNEFL 585
EV + +EK I N+ C ++ +T+M + E +
Sbjct: 494 SEVAVDIQNIKVIEKKAICNLKCVSLAVQTMMNPVENKQEIV 535
>gi|294934334|ref|XP_002781065.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239891298|gb|EER12860.1| DNA polymerase delta catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 948
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 277/761 (36%), Positives = 400/761 (52%), Gaps = 114/761 (14%)
Query: 544 RISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG 603
R+ W +Q + + ++TN+ GN+ S +L R+ERNE LL+H FH K +++PDK+
Sbjct: 227 RVGWA---LQVLSLTR-QLTNLAGNLWSHSLQNKRAERNEILLVHEFHRKKFIVPDKERP 282
Query: 604 KNKK--------EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
++K E +T A G RKKAAY+GGLVLEPK G YDK ++L+DFNSLYPSI
Sbjct: 283 GDRKSHQVDVFDENGDTKAATAGPRRKKAAYAGGLVLEPKAGLYDKLVLLLDFNSLYPSI 342
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDT-----GILPSEIKKLVESRRQVKAL 710
I+EYNICFTT+ DS + +PE ILP I +LVESR+ VK L
Sbjct: 343 IREYNICFTTVERLDAHDSALEENAGAIPELPKRAPGEGDAILPQVITRLVESRKDVKKL 402
Query: 711 MK---QPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILL 767
+K P + Q DIRQKALKLTANSMYGCLGF NSRF+A+P+AAL+T GRE L
Sbjct: 403 LKTCSNPKTGN----QLDIRQKALKLTANSMYGCLGFSNSRFYAKPIAALITRTGRETLQ 458
Query: 768 NTKSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVY 826
T +VEN L +V+YGDTDS+ + +D +IG QI +E NK YK+LELD+DGV+
Sbjct: 459 ATVDIVENQLRLDVVYGDTDSIFVHTGTEAFDQAMRIGAQIMAEINKRYKKLELDVDGVF 518
Query: 827 KYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILD--E 884
K +LLLKKKKYA + + + G I +E KG+D+VRRDW L+ + G V+ +L
Sbjct: 519 KRLLLLKKKKYAGVKVIDWAQG--IAEKEYKGLDLVRRDWCPLSKKMGDEVLRCLLGLRA 576
Query: 885 QSYTDYSLDDRLQNI--------------HEHMKKIRTDLDNGFVPLTLLEITKQLTKAP 930
+S T S D+ L ++ H+++K I +DN +PL ITK LTK P
Sbjct: 577 ESPTPASSDNGLADVDRSAQEAEHVVEWLHDYVKSISLKMDNDEIPLEDYVITKALTKMP 636
Query: 931 EEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE----------DG---------- 970
+Y D K+ HV VA + + ++ G+ I Y+I DG
Sbjct: 637 ADYPDAKSQAHVMVAKSMMESG-HVIRPGNEIPYVITRLVESATKADADGDSDTKPATLG 695
Query: 971 -TSEAATQRAYNIEELK--NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
S++ RA + +E++ +S ++ID +Y S QIHP + RL P+ GTDA +AECLG
Sbjct: 696 NDSQSVAARARSPDEVRKLGSSVIQIDTQWYKSHQIHPPLVRLCAPVSGTDAAHLAECLG 755
Query: 1028 LDTSLYRSQIKESIQQSEEN----------ILGVGEAEEVKYQFCDKFEFTCMNPSCKQV 1077
LD S + SI S N + + + ++ ++ D +F + S +Q
Sbjct: 756 LDPSKF-----ASIGMSNNNAGDGDDIEAVMASLSQNIDIDTKYSDARKF--LAGSARQY 808
Query: 1078 NTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLI-NKLSQDMNKYIVKYYEGWLKC 1136
+ T V + D EC LI N L+ + K + GW++C
Sbjct: 809 KCHKCKT------VCHIADAIKQKECVKCSAEISSALIRNLLTLILRKVTREAGLGWVRC 862
Query: 1137 EDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRV--YTELQLYQQLSFFHYICDITKALTKS 1194
+D GC +TR+ PLG C + KL ++ +T +++ LS+ + LT
Sbjct: 863 DDEGCGRVTRQLPLGTSRCPFGGC-RGKLQQLPAHTNRAVHEVLSYL-------RELTAK 914
Query: 1195 DTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
P + Y L +AY+++++ LFS
Sbjct: 915 HRPECESIPAQY-------------LSMNAYDVINITALFS 942
>gi|294881182|ref|XP_002769285.1| dna polymerase alpha catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239872563|gb|EER02003.1| dna polymerase alpha catalytic subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 1438
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 265/678 (39%), Positives = 363/678 (53%), Gaps = 97/678 (14%)
Query: 544 RISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG 603
R+ W +Q + + ++TN+ GN+ S +L R+ERNE LL+H FH K +++PDK+
Sbjct: 785 RVGWA---LQVLSLTR-QLTNLAGNLWSHSLQNKRAERNEILLVHEFHRKKFIVPDKERP 840
Query: 604 KNKK--------EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
++K E +T A G RKKAAY+GGLVLEPK G YDK ++L+DFNSLYPSI
Sbjct: 841 GDRKSHQVDVFDENGDTKAATAGPRRKKAAYAGGLVLEPKAGLYDKLVLLLDFNSLYPSI 900
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPE-----HQVDTGILPSEIKKLVESRRQVKAL 710
I+EYNICFTT+ DS + +PE ILP I +LVESR+ VK L
Sbjct: 901 IREYNICFTTVERLDAHDSALEENAGAIPELPKRAPGEGDAILPQVITRLVESRKDVKKL 960
Query: 711 MK---QPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILL 767
+K P + Q DIRQKALKLTANSMYGCLGF NSRF+A+P+AAL+T GRE L
Sbjct: 961 LKTCSNPKTGN----QLDIRQKALKLTANSMYGCLGFSNSRFYAKPIAALITRTGRETLQ 1016
Query: 768 NTKSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVY 826
T +VEN L +V+YGDTDS+ + +D +IG QI +E NK YK+LELD+DGV+
Sbjct: 1017 ATVDIVENQLRLDVVYGDTDSIFVHTGTEAFDQAMRIGAQIMAEINKRYKKLELDVDGVF 1076
Query: 827 KYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILD--E 884
K +LLLKKKKYA + + + G I +E KG+D+VRRDW L+ + G V+ +L
Sbjct: 1077 KRLLLLKKKKYAGVKVIDWAQG--IAEKEYKGLDLVRRDWCPLSKKMGDEVLRCLLGLRA 1134
Query: 885 QSYTDYSLDDRLQNI--------------HEHMKKIRTDLDNGFVPLTLLEITKQLTKAP 930
+S T S D+ L ++ H+++K I +DN +PL ITK LTK P
Sbjct: 1135 ESPTPASSDNGLADVDRSAQEAEHVVEWLHDYVKSISLKMDNDEIPLEDYVITKALTKMP 1194
Query: 931 EEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE----------DG---------- 970
+Y D K+ HV VA + + ++ G+ I Y+I DG
Sbjct: 1195 ADYPDAKSQAHVMVAKSMMESG-HVIRPGNEIPYVITRPVESATKADADGDPDTKPAALG 1253
Query: 971 -TSEAATQRAYNIEELK--NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
S++ RA + +E++ +S ++ID +Y S QIHP + RL P+ GTDA +AECLG
Sbjct: 1254 NDSQSVAARARSPDEVRKLGSSVIQIDTQWYKSHQIHPPLVRLCAPVSGTDAAHLAECLG 1313
Query: 1028 LDTSLYRSQIKESIQQSEENILGVGEAEEV------------KYQFCDKF-EFTCMNPSC 1074
LD S + SI S N + E V KY KF T C
Sbjct: 1314 LDPSKF-----ASIGMSNNNTGDGDDIETVMASLSQNIDTDTKYSDARKFLAGTARQYKC 1368
Query: 1075 KQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLI-NKLSQDMNKYIVKYYEGW 1133
+ T V + D EC LI N L+ + K + GW
Sbjct: 1369 HKCKT-----------VCHIADAIKQKECVKCSAEISSALIRNLLTLILRKVTREAGLGW 1417
Query: 1134 LKCEDPGCSDLTRRCPLG 1151
++C+D GC +TR+ PLG
Sbjct: 1418 VRCDDEGCGRVTRQLPLG 1435
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 21/200 (10%)
Query: 373 ATDHENKKVFRMFFLDAFEDIY--KQPGTVYLFGKVFVKENNSHS------SCCVIVQNI 424
A E M+ LD +ED+ K P +YLFGK ++ + S SCCV+V NI
Sbjct: 336 AVKEEEDGSLMMYLLDVYEDVLPNKTP-ALYLFGKTRRRDGKASSGRAEYESCCVVVTNI 394
Query: 425 DRKIYLLPRSEHLKTKE-PVSIAQVYSEFDQI-----ATQYKILDFKSRKIEKKYAFN-L 477
R + LPR + E + V EF+ + + +K + + + Y F+ +
Sbjct: 395 MRNCFFLPREQSEDEAECKAACYSVMQEFESMRKKSGGVLAAVNRYKCKFVWRNYCFDQV 454
Query: 478 PGVPDLS-EYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP 536
G+P +L+V YS+ CPALPS L G +FSHVFGT +S E L++R+I GP W++
Sbjct: 455 HGIPHGRLGFLKVVYSSNCPALPSGLEGKSFSHVFGTNTSLTELFLIKRRIMGPCWIQIS 514
Query: 537 EAEKFPS----RISWCKYEV 552
PS ++SWC EV
Sbjct: 515 SGSFNPSTTLNKLSWCAREV 534
>gi|448521819|ref|XP_003868577.1| Pol1 DNA directed DNA polymerase alpha [Candida orthopsilosis Co
90-125]
gi|380352917|emb|CCG25673.1| Pol1 DNA directed DNA polymerase alpha [Candida orthopsilosis]
Length = 1449
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/659 (36%), Positives = 364/659 (55%), Gaps = 53/659 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG-------------KNKK 607
++TN+ GN S TL G R+ RNE++LLH F +Y++PDK+ +N
Sbjct: 747 QLTNIAGNAWSHTLSGTRAGRNEYILLHEFRRNNYIVPDKEDSTHKNTSFQQEAQLENAD 806
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
E +T +NK K Y GGLV EP+KG + +I++MDFNSLYPSIIQEYNICFTT+
Sbjct: 807 EDVQTATSNK-----KPKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEYNICFTTVD 861
Query: 668 VRML-----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+D D+ +P++ + G+LP + LV RR+VK L+K P +
Sbjct: 862 RARFNTTHNEDKDM----PLIPDNDSERGVLPRLLNTLVTRRREVKKLLKDPKNTPFQRA 917
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIY 782
QYDI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL++T+ L E V+Y
Sbjct: 918 QYDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMDTRQLAEASGLRVVY 977
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
GDTDS+MI K G K + N+ Y+ LE+DID V+K +LL KKKYAA+++
Sbjct: 978 GDTDSVMIDTGAQSLKEAIKFGEDFKLQVNERYRMLEIDIDNVFKRLLLHAKKKYAAMNV 1037
Query: 843 S-KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
S + G+ + + E+KG+D+ RR++ QL+ + FV+ +IL +D ++ LQ+++
Sbjct: 1038 SVNKATGEEVSTLEVKGLDMRRREYCQLSKDISTFVLMKIL-----SDSDPEEALQDVYS 1092
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
+++++R + +P+ +I +L+K P Y + K++P V VALRL N K +K G
Sbjct: 1093 YLEEMRDKILRNEIPVDRFKINTKLSKDPNNYPNGKSMPQVSVALRLKN-EGKVIKAGSV 1151
Query: 962 ISYII---CEDGTSEAATQRAYNIEELKNNS-KLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
ISY++ + +RA ++EL + LK D +YL +QI V RLL+ I+
Sbjct: 1152 ISYVVTAPTNETDKSTVAERARALQELLSKKLDLKPDPMFYLEKQIFAPVERLLDKIDSV 1211
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQV 1077
D +R+A LG+DT Y ++K E + +++ +++ C +C V
Sbjct: 1212 DMMRVATSLGIDTKRYILKVKNEGFNGEIASIESNISDDERFRQSSYLVLKC---NCGHV 1268
Query: 1078 NTVEAPTRLSTHGVVFVLDECINPECKVPPYTY-LPHLINKLSQDMNKYIVKYYEGWLKC 1136
+ + V F CK YT+ L +L + K+I YY GWL C
Sbjct: 1269 FRYGGIQSSNDYKVTFN-----GVTCKRCDYTFPTIKLTAQLEATIRKHIALYYCGWLVC 1323
Query: 1137 EDPGCSDLTRRCPLGLKTRLCTT-----CHKYKLHRVYTELQLYQQLSFFHYICDITKA 1190
+D C TR+ + K + T+ C +R YT+ LY QL +F+ I D+ K
Sbjct: 1324 DDNSCGIETRQISVYGKRCIGTSGKGLDCRGVMRYR-YTDKALYNQLLYFNSIFDVEKT 1381
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR-SEHLKTK 440
F+MF+LD E ++ LFGK+ K+ +S V V + R++Y+LP+ +E
Sbjct: 314 FKMFWLDYAE----VENSLLLFGKIQTKDGKV-ASGVVQVNGLCRELYILPKVNEGSGKN 368
Query: 441 EPVSIAQVYSEFDQI-ATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV----RYSAKC 495
E S V E I YK+ +++ KKYAF L +P EYL+V +
Sbjct: 369 ERFSTDDVREEITPIFMDNYKLETLRAKPETKKYAFELANIPKEIEYLKVLLPYNTATNR 428
Query: 496 PALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCKYEVQC 554
LP+D G+TF+H+FGT ++ E+ + +R I GP WLE + R S C+ EV
Sbjct: 429 RVLPADTEGETFNHIFGTNANMFESFVTQRNIMGPCWLEIQGGDFDAIRNSSHCQIEVAV 488
Query: 555 NQMEKIRITN---------VCGNVLSRTLMGGRSERNEFL 585
KI + + C ++ +T+M + + E +
Sbjct: 489 ASPGKISVVDKSPPPAPNLTCTSISVQTVMNPKQNKQEVV 528
>gi|145349730|ref|XP_001419281.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579512|gb|ABO97574.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 990
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/503 (43%), Positives = 317/503 (63%), Gaps = 35/503 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE-GEETGEANKGK 619
+++N+ GN+ S+TL R++R E+LLLH FH + +++PD+ K ++ +GE
Sbjct: 470 QLSNIAGNLWSKTLGHTRAQRVEYLLLHEFHSRKHIVPDRLSAKERRRVAAASGEEEDDG 529
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
G+K +Y+GG VLEPKKG YD F++++D+ SLYPSIIQEYNIC+TT+ R + T
Sbjct: 530 GKKGPSYAGGRVLEPKKGLYDTFVLVLDYQSLYPSIIQEYNICYTTVR-RHFDAGEENTE 588
Query: 680 CEYLPEHQV---DTGILPSEIKKLVESRRQVKALM---KQPNLSSDLLMQYDIRQKALKL 733
E LP + D +LP I +V+SRR+VK LM K P + QYD+RQ ALKL
Sbjct: 589 IE-LPAPILSDKDFAVLPKVIANIVQSRREVKGLMAREKDPARAK----QYDLRQLALKL 643
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLNYEVIYGDTDSLMISC 792
TANSMYGCLGF SRFFA+P+AAL+TA+GR+IL T+ L + +VIYGDTDS+M++
Sbjct: 644 TANSMYGCLGFSQSRFFAEPIAALITAQGRKILQRTEDLAKAKCELDVIYGDTDSIMVNT 703
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
+D + +GN++ NK Y++L L+ D +++ MLLLKKKKYAA+ + NG
Sbjct: 704 KSHDLNHSRALGNKLIRFVNKEYRKLVLEEDYIFRSMLLLKKKKYAAMKVVNGPNGTKAT 763
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
E+KG+D+VRRDW+ L + GK + ++LD D ++R+ IH+ ++ IR D+
Sbjct: 764 KLEMKGLDIVRRDWAPLVKDVGKQTLEELLD----VDGEREERVNAIHDGLRTIRKDMVE 819
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVA-LRLNNTNSKKLKQGDTISYIIC---- 967
V L+ ITKQLTKA EEY D K PHV VA RL +K G+T+ YII
Sbjct: 820 NRVQLSKYIITKQLTKAVEEYPDAKHQPHVMVAKRRLEAGKQDGVKAGETVPYIIALESE 879
Query: 968 ---ED--------GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
ED + +RAY+ +E+ LK+D++YYLSQQ+HPV+TRL PIE
Sbjct: 880 LPLEDIAAGKAGASGGKGLAERAYHPDEILEKG-LKVDLHYYLSQQVHPVITRLCAPIEE 938
Query: 1017 TDAVRIAECLGLDTSLYRSQIKE 1039
TD +AECLGLD++ +++Q ++
Sbjct: 939 TDGAAMAECLGLDSNKFKTQTRD 961
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 24/191 (12%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKEN--NSHSSCCVIVQNIDRKIYLLP--------- 432
FF+DA E+ + PGTV+LFG+V V + + S C +VQN+ R +Y++P
Sbjct: 6 FFFMDAQEE-RESPGTVFLFGRVPVSSDPQSETISACAVVQNMQRCMYIVPTASTFADPD 64
Query: 433 --------RSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLS 484
+S+ +K P+S + +E ++ KI + K + ++Y F +P
Sbjct: 65 GEIAAQKAKSDLMKKLVPLS-GDLRAEVKEVLKARKIENSKITIVRRRYCFERKDIPQGP 123
Query: 485 EY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS 543
+ L+V+ A A PSD+ G F GT++ LE L L+ K+KGPSW+ A P+
Sbjct: 124 LFVLKVKIPATYAAFPSDIKGKHFVAALGTQAPMLELLTLKSKLKGPSWIALHGAAIVPT 183
Query: 544 --RISWCKYEV 552
+ SWCK E+
Sbjct: 184 EKQKSWCKLEL 194
>gi|255713646|ref|XP_002553105.1| KLTH0D09064p [Lachancea thermotolerans]
gi|238934485|emb|CAR22667.1| KLTH0D09064p [Lachancea thermotolerans CBS 6340]
Length = 1453
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 260/733 (35%), Positives = 395/733 (53%), Gaps = 76/733 (10%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG--KNKK 607
+ +Q + K ++T + GN +TL G R+ RNE++LLH F +Y++PDK+ +N++
Sbjct: 749 FRIQILSLTK-QLTVLAGNAWCQTLGGTRAGRNEYILLHEFERNNYIVPDKETKSMRNQR 807
Query: 608 EGEETGEANKGKG------RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
+ EA G KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQEYNI
Sbjct: 808 QQRAREEAGLDGGDEVQVSSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEYNI 867
Query: 662 CFTTIPVRMLQDSDITTLCEY--LPEHQVDTGILPSEIKKLVESRRQVKALMK-QPNLSS 718
CFTT+ + D + + E +P ++ G+LP + LV+ RR+VK L+K +P+
Sbjct: 868 CFTTV------ERDPSNIDELPNVPSSEMAQGVLPRLLASLVQKRREVKKLLKTEPDPHK 921
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNY 778
Q DIRQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E+L
Sbjct: 922 R--TQCDIRQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESLAL 979
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
V+YGDTDS+MI + Y KIG K N+ Y+ LE+D D V++ +LL KKKYA
Sbjct: 980 TVVYGDTDSVMIDTGSDSYMEAIKIGENFKKLVNERYRLLEIDTDNVFRKLLLHAKKKYA 1039
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
AL++ +G E+KG+D+ RR++ L+ E V+ IL +D + LQ+
Sbjct: 1040 ALTVVFDKSGAEKTLLEVKGLDMRRREYCPLSKEVSTHVLETIL-----SDKEPETALQD 1094
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
++E+++ IR ++N + + +I +L+K P+ Y K +P VQ ALR+ + +K
Sbjct: 1095 VYEYLEDIREKVENNTIRVDKYKINTRLSKDPKAYPGGKNMPAVQAALRMREA-GRVVKA 1153
Query: 959 GDTISYII-----CEDGTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
G I+++I ED +S + +RA + E + N+ L+ D +YL +QI V RLLE
Sbjct: 1154 GSVITFVITKQEGVEDDSSLSPAERARVLNEVMVKNNNLRPDPQFYLEKQIFAPVERLLE 1213
Query: 1013 PIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEF----- 1067
IE D VR++E LGLD+ R I + E N G + ++ D+ F
Sbjct: 1214 RIESFDIVRLSESLGLDS---RRFINRAGANGELNGSSSGSLQPLESSISDEERFKDVAA 1270
Query: 1068 -TCMNPSCKQ---VNTVEAPTR--LSTHGVVFVLDECINPECKVPPYTYLP-HLINKLSQ 1120
T C+Q + A R +S G+ +C +T+ P + +L
Sbjct: 1271 LTFQCSGCQQRFPFGGIVASKRYQMSYSGL----------QCSSCQHTFAPLQMSAQLES 1320
Query: 1121 DMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSF 1180
+ +I YY G+L C+DP C + TR+ + K L C +R YT+ QLY QL +
Sbjct: 1321 AIRSHISMYYAGYLACDDPTCGNNTRQVSVFGKRCLNENCMGVMRYR-YTDKQLYNQLLY 1379
Query: 1181 FHYICDI-------TKALTK---SDTPSIKFDSETYMG--------YCKMKQHVERFLES 1222
F + D+ K L K D P K + + + M V+++L +
Sbjct: 1380 FESLFDVDKNKKDAVKPLYKPDHPDAPEAKIPTSQLLALGEQNRELFQVMSSVVQKYLAN 1439
Query: 1223 SAYNIVDLKKLFS 1235
A VD+ +F+
Sbjct: 1440 CARRFVDMDAIFA 1452
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 148/555 (26%), Positives = 249/555 (44%), Gaps = 95/555 (17%)
Query: 81 DENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHD 137
D+ VY+ + E+E+ R +KRQE DD++ DD G GYV+ G + +DD D E+ D
Sbjct: 32 DDKVYDLIDEEEF--RSMKRQELLRDDFVVDDDGLGYVDRGVDEWDDRNRDQNYSSEEDD 89
Query: 138 K-----RKKNKNIQNPNAKG-------DIQKLLA-----NMPVKKKKKEEVQLNN-DDVL 179
K K +K I+N + KG I ++A N V K ++ L+ DD+L
Sbjct: 90 KPRERAAKGSKKIKN-DGKGVKSSSGASIGDIIAAQHTKNAKVLSKAPKKFSLDEFDDIL 148
Query: 180 ADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKE 239
+ +T L K++ +V PK E +E A + P KI++
Sbjct: 149 QEFDGNEASTAVGGL-FGAKSHRVV-PKLE--NNIKREANAAATPPTIKRMKIDEQSFST 204
Query: 240 PSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNS-----QQTQDVLPE 294
P + +N S + ++K +DD + M IDD +S +++ D++
Sbjct: 205 P-----QGGANTSPL-----AGTKTKANLLDDRDLQAM-IDDVQSSPTITKERSADIVKS 253
Query: 295 QAK---------VELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEK-KEHKC 344
+ + + I S + ++ +V SV S+ ++ P P K KE
Sbjct: 254 GGQSSEEDSDEEITFRRRTIRSAAASQRSNVDIRSSVQSSPFVTAPPTPSGSSKLKEENP 313
Query: 345 AEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFG 404
I S S+ +N F+ ++LD F ++ T+ LFG
Sbjct: 314 KSLSFIGKRYSRSD---------------VISDNASSFKFYWLD-FAEV---DSTLLLFG 354
Query: 405 KVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQ-YKILD 463
K+ +EN S+ I+ N+ R+++ LPR E + + V+ E + + Y + +
Sbjct: 355 KISTRENKLISAMIQIL-NLSRELFFLPR-------EGKTASDVHGEIIPLLMEKYGLEN 406
Query: 464 FKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFL 518
+++ KKYAF LPG+P SEYL+V + P +PSDL GDTF HVFG ++
Sbjct: 407 IRAKPEIKKYAFELPGIPHESEYLKVLLPYRTPKNRNVTIPSDLEGDTFHHVFGGNTNIF 466
Query: 519 ENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQMEKIRITN-------VCGNVL 570
E+ ++++K+ GP WLE + S S C EVQ +Q I T+ C ++
Sbjct: 467 ESFVVQKKVMGPCWLEINNGDFSALSNASHCDIEVQVSQPSSIEPTSDKHVPNLNCASLA 526
Query: 571 SRTLMGGRSERNEFL 585
+T+M + + E +
Sbjct: 527 VQTIMSSKENKQEIV 541
>gi|366995475|ref|XP_003677501.1| hypothetical protein NCAS_0G02620 [Naumovozyma castellii CBS 4309]
gi|342303370|emb|CCC71149.1| hypothetical protein NCAS_0G02620 [Naumovozyma castellii CBS 4309]
Length = 1454
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 249/653 (38%), Positives = 370/653 (56%), Gaps = 55/653 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-------G 613
++TN+ GN ++TL G R+ RNE++LLH F Y++PDK+ K + + ++ G
Sbjct: 760 QLTNLAGNAWAQTLGGTRAGRNEYILLHEFKRNGYIVPDKETNKMRSQRQQKKADEQGDG 819
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
E N G KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+ +D
Sbjct: 820 EVNTGAASKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVE----RD 875
Query: 674 SDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKL 733
+ +P ++ G+LP + LV+ RR+VK +M + +Q DIRQ+ALKL
Sbjct: 876 PENIEELPEVPSTDIEQGVLPRLLANLVQRRREVKKIMATES-DPHKRVQCDIRQQALKL 934
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCN 793
TANSMYGCLG+ SRF+A+PLA LVT KGREIL+NT+ L EN+N V+YGDTDS+MI
Sbjct: 935 TANSMYGCLGYVYSRFYAKPLAMLVTNKGREILMNTRQLAENMNLLVVYGDTDSVMIDTG 994
Query: 794 VNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICS 853
++Y KIGN K N YK LE+DID V+K +LL KKKYAAL++S GK
Sbjct: 995 CDNYADAIKIGNNFKKLVNDRYKLLEIDIDNVFKKLLLHAKKKYAALNVSIDKEGKERTV 1054
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
E+KG+D+ RR++ L+ + V++ IL +D + LQ ++++++ ++ ++N
Sbjct: 1055 LEVKGLDMKRREFCPLSKDVSTHVLTTIL-----SDKDPETALQEVYDYLENVKNKMENN 1109
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
+ +I +L+K P+ Y K +P VQVAL++ + +K G I+++I + SE
Sbjct: 1110 EIRADKYKINMKLSKDPKAYPGGKNMPAVQVALKMRKA-GRVVKAGSVITFVITKQEESE 1168
Query: 974 -----AATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
A RAY + E +K +S LK D YYL +QI V RLLE IE D VR++ LG
Sbjct: 1169 DKEIIPAADRAYALNEVMKKDSNLKPDPEYYLEKQIFAPVDRLLERIESFDVVRLSAALG 1228
Query: 1028 LDTSLYRSQIK---------ESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVN 1078
LD+ Y + + +S+Q E I + EV E +C P+C
Sbjct: 1229 LDSKKYLRRGENGGGTGNSIDSLQPLETTISDMERFAEVAL-----LELSC--PNC---- 1277
Query: 1079 TVEAPTRLSTHGVVFVLDECINP-ECKVPPYTYLP-HLINKLSQDMNKYIVKYYEGWLKC 1136
+E P + + C N +CK + + P + ++L + +I YY GWL C
Sbjct: 1278 NIEFPFGGIIASNYYQM--CYNGLQCKKCEHMFTPLQISSQLESCIRSHISLYYAGWLTC 1335
Query: 1137 EDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICD 1186
+D C + TR+ + K L CT +Y+ Y++ QLY QL +F + D
Sbjct: 1336 DDSTCGNATRQISVFGKRCLNDGCTGVMRYR----YSDKQLYNQLLYFGSLFD 1384
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 29/226 (12%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEH 436
EN K F+MF++D E ++ LFGK+ + N S I + R++Y LP ++
Sbjct: 332 ENGK-FQMFWMDFCE----VNNSLILFGKIRTNDGNLISGMLQI-NGLCRELYFLPNTD- 384
Query: 437 LKTKEPVSIAQVYSEFDQIATQ-YKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKC 495
KT E +++ E + + Y + D +++ + KYAF LPG+P S YL+V +
Sbjct: 385 -KTPE-----EIHEEIIPLLLEKYGLHDIRAKPEKMKYAFELPGIPHESTYLKVLLPFQT 438
Query: 496 PA-----LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWC 548
P +P DLS +TF+HVFG ++ E ++ KI GP WLE + F S S C
Sbjct: 439 PKSSNDLIPPDLSSETFNHVFGGNTNIFEAFAIQNKIMGPCWLEISNGD-FNSLQNSSNC 497
Query: 549 KYEVQCNQMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLL 587
EV ++ + I++ + C ++ +T+M + + E + +
Sbjct: 498 AVEVSVHKPQDIQVADNKTTPDLKCISLAVQTVMNSKENKQEIVAI 543
>gi|303278858|ref|XP_003058722.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459882|gb|EEH57177.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1439
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 236/518 (45%), Positives = 321/518 (61%), Gaps = 47/518 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
+++N+ GN+ ++TL R+ R E LLLH FH + Y++PD+ K +K G G + G G
Sbjct: 686 QLSNIAGNLWAKTLQHTRATRVEHLLLHEFHARKYLMPDRLSAKERKFGRGGGGGDDGDG 745
Query: 621 RKKA------------AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-- 666
+Y+GGLVLEPKKG YDKF++++DFNSLYPSIIQEYNICFTT+
Sbjct: 746 EGDGEGVKAGKKKGGPSYAGGLVLEPKKGLYDKFVLMLDFNSLYPSIIQEYNICFTTVAR 805
Query: 667 PVRMLQDSDITTLCEYLPE------HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL 720
P D LPE ++ +LP I+KLV+ RR+VK ++K ++
Sbjct: 806 PKADPNDPAGVAPAPQLPEPCAGGPGGPNSAVLPQVIRKLVQRRREVKNMIKTEK-NAAR 864
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYE 779
Q DIRQ+ALKLTANSMYGCLGF SRF+A+PLA LVT +GREIL +T L + L +
Sbjct: 865 RQQLDIRQQALKLTANSMYGCLGFAASRFYAKPLAELVTLQGREILQSTVDLAQGTLGMD 924
Query: 780 VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAA 839
VIYGDTDS+MI+ + V IG +K E NK YK LE+++DG++K MLLLKKKKYAA
Sbjct: 925 VIYGDTDSIMINTKSTNLQEVSAIGAALKKEVNKRYKLLEIEMDGIFKSMLLLKKKKYAA 984
Query: 840 LSISKLSNGK--MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
L + ++G E KG+D+VRRDWS LA G + IL + +D ++
Sbjct: 985 LMVKPAADGSGGFTTVMEQKGLDIVRRDWSPLAKRQGNHALELILSGRPA-----EDVVE 1039
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK-L 956
+IHE ++K R DL NG V + ITKQLTK PE+Y D HVQVALRL + ++ +
Sbjct: 1040 DIHESLRKCREDLVNGVVTMDQFIITKQLTKRPEDYPDAANQAHVQVALRLRDAGKREGV 1099
Query: 957 KQGDTISYIIC---EDGTSE-------------AATQRAYNIEEL-KNNSKLKIDVNYYL 999
QG+T+ Y+I + T+E RAY+ +E+ S LK+D++YYL
Sbjct: 1100 NQGETVPYVIAVKTDSATAEDIASGRTGATGGKGLADRAYHPDEVAAEGSGLKLDLHYYL 1159
Query: 1000 SQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQI 1037
+QQ+HPVV+RL +PIEGTDA RIA+CLGLD S + +Q+
Sbjct: 1160 TQQVHPVVSRLCQPIEGTDAARIADCLGLDASKFHAQV 1197
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 105/248 (42%), Gaps = 47/248 (18%)
Query: 365 TADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSC---CVIV 421
AD SLPL D F LDA EDI PGTV+LFGKV V + C C +V
Sbjct: 190 AADGSLPLDPD----ATLPFFILDAHEDI-SVPGTVFLFGKVPVNAGEVNGECVSACAVV 244
Query: 422 QNIDRKIYLLPRSEHLKTKE---------------------------------PVSIAQV 448
N+ R + +P E E A V
Sbjct: 245 PNMQRCAFAVPTPETFADPENEISDLEDAAAAAAAGDDAAAAKKAKGALLRCLQGRCADV 304
Query: 449 YSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDTF 507
+E ++ I F + +++ Y F +P S+Y ++VR+ A ALP D+ G F
Sbjct: 305 KNELREMLLARGIEQFTMKPVKRSYCFEKDDIPRGSQYVIKVRFPATYAALPGDVRGAHF 364
Query: 508 SHVFGTKSSFLENLLLERKIKGPSWLEFPEAE--KFPSRISWCKYEVQCNQMEK-IRITN 564
+ GT++ LE+L+++ +I GPSW+ A ++ S CK EV K +R T
Sbjct: 365 ITMLGTQTPMLEHLMIKSRIMGPSWIALHGANVVDVSAQRSHCKLEVVLPSGHKSVRPTA 424
Query: 565 VCGNVLSR 572
G LSR
Sbjct: 425 TNG--LSR 430
>gi|301109283|ref|XP_002903722.1| DNA polymerase alpha catalytic subunit, putative [Phytophthora
infestans T30-4]
gi|262096725|gb|EEY54777.1| DNA polymerase alpha catalytic subunit, putative [Phytophthora
infestans T30-4]
Length = 1523
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 251/698 (35%), Positives = 370/698 (53%), Gaps = 87/698 (12%)
Query: 561 RITNVCGNVLSRTLMGG-RSERNEFLLLHAFH--EKSYVLPDKQYGKNKKEGEETGEANK 617
++ N+CG + +RTL R+ER E+LLLH F + +++P+K + EA+K
Sbjct: 791 QLANLCGYMWTRTLEANKRAERIEYLLLHEFSRSKNKFIVPEKFKSRT--------EADK 842
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM------- 670
R++A+Y+GG+V PKKG YD F++L+DF SLYPSII+EYNICFTT+ ++
Sbjct: 843 SNKRREASYAGGMVFAPKKGLYDNFVVLLDFMSLYPSIIREYNICFTTVERQLNEDVSGA 902
Query: 671 ------------------------------LQDSDITTLCEY--LPEHQVDTGILPSEIK 698
L ++D + E LP + G+LP+ IK
Sbjct: 903 PSSIKKKKKSKPMPQPENDEVVDDEDMDQNLDNADASADSEIPALPSSASEPGVLPAVIK 962
Query: 699 KLVESRRQVKALMK--QPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAA 756
+L+ESR+QVK +K Q + + DIRQKA+KLTANSMYGCLGF SRF+A+P+AA
Sbjct: 963 RLLESRKQVKQQLKIEQKEGNVEKANMLDIRQKAIKLTANSMYGCLGFRFSRFYAKPIAA 1022
Query: 757 LVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY 815
L+T+ GR+ L K + E Y+VIYGDTDS+M+ D +IG +I+++CNK +
Sbjct: 1023 LITSTGRQTLQRAKEVAEQECGYDVIYGDTDSIMVDSRTETLDEAKRIGREIQAQCNKHF 1082
Query: 816 KQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGK 875
K LEL++D ++K +LLL KKKYAAL + + N + +E+KG+D+VRRDW ++ G
Sbjct: 1083 KLLELEVDYIFKRILLLNKKKYAALVMKERPNSEPTFDKEVKGLDMVRRDWCVISKAVGN 1142
Query: 876 FVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTD 935
V+ IL + S DD +++IHEH++++ + +G P+ ITK L K PE+Y D
Sbjct: 1143 EVLDFIL-----SGNSRDDVVESIHEHLEQVAERMRSGKEPIEQYVITKSLNKQPEQYPD 1197
Query: 936 RKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKN-NSKLKID 994
R HVQVAL L K + G I+Y++C++ + +RAY+ +E+K N KL ID
Sbjct: 1198 RAKQYHVQVALALRALG-KPVGAGTHIAYVLCKE-EEPGSGRRAYHPDEVKRANGKLNID 1255
Query: 995 VNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEEN-----IL 1049
V +YL QIHP V RL IEGT + ++A CLGLDT ++ S EEN I
Sbjct: 1256 VEWYLESQIHPPVNRLCAHIEGTSSPQLAHCLGLDT----AKFSHSANHFEENDGGDAIP 1311
Query: 1050 GVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYT 1109
V + + +++ C E TC CK + S + P CK +
Sbjct: 1312 SVLQNDADRFKDCVPLEITC--DRCKMASAFPGVFGTSEKDSSLA-SGLLCPVCKADFWG 1368
Query: 1110 YLPH-------------LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL 1156
+ L N+L + KYYE W C D C T++ L +
Sbjct: 1369 FDKEGIYGNVGDDLQAVLSNRLHIATRQATKKYYEAWAVCSDVTCKTRTQKQSLRGNGNI 1428
Query: 1157 CTTCH-KYKLHRVYTELQLYQQLSFFHYICDITKALTK 1193
C+ + Y + LY QL +F + D +A K
Sbjct: 1429 CSAAGCRATTTLEYPDSALYTQLKYFESLFDAERAQKK 1466
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 122/236 (51%), Gaps = 31/236 (13%)
Query: 342 HKCAEWEAIQTEPSTSEPQVHSRTADDS----LPLATDHENKKVFRMFFLDAFEDIYKQP 397
++ AEW + + + + +ADD+ LP A D +M+++DA E + ++P
Sbjct: 288 NEVAEWWHVAGDDDANVSMADA-SADDAEPETLPSAADS-----IQMYWMDAVE-VRERP 340
Query: 398 GTVYLFGKVFV------KENNSHSSCCVIVQNIDRKIYLLPRSEHL----KTKEPVSIAQ 447
G +YL GK+ + + + SCCV+V N+ R +YL+P+ L T++ + +
Sbjct: 341 GKIYLIGKMKIPSPEGSNQPPTFRSCCVVVNNLQRYMYLVPKGTPLIELSNTEQQEAWMK 400
Query: 448 VYSEFDQIATQYKILD------FKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPS 500
++ E I I + FK++ +E+ YAF +P +++L+V+Y AK PA PS
Sbjct: 401 MHEEIHNILIPSCITNRRDQEVFKTKLVERNYAFEEANIPRGKNQFLKVKYPAKYPAPPS 460
Query: 501 DL---SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQ 553
D G TFS + G + LEN LL R++ GP W+E K +S+CK E +
Sbjct: 461 DFCSRGGKTFSRICGAFTRPLENFLLTRRLLGPGWVEIKGVRKCTEGVSFCKMEFE 516
>gi|403217489|emb|CCK71983.1| hypothetical protein KNAG_0I01980 [Kazachstania naganishii CBS 8797]
Length = 1464
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 252/668 (37%), Positives = 373/668 (55%), Gaps = 54/668 (8%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE- 608
+ +Q + K ++TN+ GN S+TL G R+ RNE++LLH F + Y++PDK+ K + +
Sbjct: 755 FRIQLLSLTK-QLTNLAGNAWSQTLGGTRAGRNEYILLHEFSKNGYIVPDKETQKMRNQR 813
Query: 609 ---------GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEY 659
G+E E KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+
Sbjct: 814 QMQMQRNEKGDEDTETTALGSSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEF 873
Query: 660 NICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSD 719
NICFTT+ R LQD D +P + G+LP + LVE RR+VK +MK
Sbjct: 874 NICFTTVD-RNLQDID---ELPTVPSDDKNQGVLPRLLANLVERRREVKKVMKTEK-DPH 928
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYE 779
+Q DIRQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGRE+L+NT+ L E +
Sbjct: 929 KYVQCDIRQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREVLMNTRQLAETMGLV 988
Query: 780 VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAA 839
V+YGDTDS+MI Y KIG K N+ YK LE+DID V+K +LL KKKYAA
Sbjct: 989 VVYGDTDSVMIDTGCESYADAIKIGENFKKLVNERYKLLEIDIDNVFKKLLLHAKKKYAA 1048
Query: 840 LSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNI 899
L+++ G E+KG+D+ RR++S L+ + V+S +L +D + LQ +
Sbjct: 1049 LNVTINKAGVEHVKLEVKGLDMRRREFSPLSKDVSTHVLSTVL-----SDKDPETALQEV 1103
Query: 900 HEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQG 959
+E+++ I+T ++N + + +I +++K P Y K +P VQVAL++ K +K G
Sbjct: 1104 YEYLEDIKTKMENNEIRIDKYKINTKISKDPTAYPGGKTMPAVQVALKMRKA-GKLVKAG 1162
Query: 960 DTISYIIC-------EDGTSEAATQRAYNIEELKNNS-KLKIDVNYYLSQQIHPVVTRLL 1011
+ I++II + G +RA+ + ++ + S L+ D YYL +QI V RLL
Sbjct: 1163 NVITFIITKPKLEDEKSGERSHPAERAFALNDVMDKSNNLQPDPEYYLEKQIFSPVERLL 1222
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGE---AEEVKYQFCDKFEFT 1068
E IEG D VR+++ LGLD+ Y + + N L E ++ +++ E
Sbjct: 1223 ERIEGFDVVRLSQALGLDSKKYLIRASDDANGHGSNSLQPLETTISDMERFKDSSNLELH 1282
Query: 1069 CMNPSCKQVNTVEAPTRLSTHGVVF--VLDECINP-ECKVPPYTYLP-HLINKLSQDMNK 1124
C P+C Q + GV+ C N +CK + + P L +L +
Sbjct: 1283 C--PNCSQ--------QFVFGGVIASNFYQMCYNGLQCKKCEHIFTPIQLSCQLESIIRA 1332
Query: 1125 YIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFF 1181
+I YY GWL C+D C ++TR+ + K L CT +Y+ Y++ QLY QL +F
Sbjct: 1333 HISLYYAGWLVCDDMTCGNVTRQISVFGKRCLNEGCTGVMRYR----YSDKQLYNQLLYF 1388
Query: 1182 HYICDITK 1189
+ D K
Sbjct: 1389 ESLFDCAK 1396
Score = 110 bits (274), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 139/536 (25%), Positives = 248/536 (46%), Gaps = 70/536 (13%)
Query: 55 TNKFAAFQKLKDLKGQGVKHKYEFTADEN----VYEEVSEKEYTERVLKRQE---DDWID 107
++K +KL+ + H Y ++DE+ +Y+EV E EY +R KRQE DD++
Sbjct: 3 SDKLEKLRKLQAARRGKQDHGYSHSSDEDNDVQLYDEVDENEYKKR--KRQELLQDDFVV 60
Query: 108 DDGGDGYVEDGREIFDD------DIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANM 161
DD G+GY++ G E ++ D D + K+ +KK ++Q+ NA G + + +
Sbjct: 61 DDDGEGYIDRGVEEAEEYYSGESDEGDNAKHKKAPKDKKKKTSVQSKNAIGSMLRAQHSK 120
Query: 162 PVKKKKKEEVQLNNDDVLADLLSEVNTT-IAPTLKLNTKTNEIVIPKEEPPAPT-----A 215
+K+ + ++N D D+L E + T P L VIP P +P +
Sbjct: 121 KAANLQKKTLAIDNFD---DILGEFDATETKPALHR-------VIPARLPSSPQESFKRS 170
Query: 216 KEYLANFSKPIKVEKKIEKP---IKKEPSPLKDEI-KSNDSVMEVE--MNVAEQS---KE 266
++ ++FS +K +K ++ SPL++++ K+ + + + +N E S +
Sbjct: 171 QDTDSSFSNTVKRQKNDNSAAYELRLNSSPLRNQVSKAKHDITDFDDLLNDVENSPTMTK 230
Query: 267 EPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVT-NVESVSSA 325
+PV ++ + + + EL + +S+ VT N S ++
Sbjct: 231 KPVSSTSTSPLK-----KTVPVSLDDDDDSDEELVFKKRPMRSVTTSRQVTLNPRSNPNS 285
Query: 326 VELSTSP--PPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFR 383
T+P P ++ K +K + + STSEP + +S + ++ N F
Sbjct: 286 SPFVTAPGTPVGFIDLK-NKEGSLSSNTPQTSTSEPLTFANKYTESQMVESNTGNS--FE 342
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPV 443
MF+LD F ++ ++ L+GK + + S V + + R++Y LPR +
Sbjct: 343 MFWLD-FAEVN---NSLVLYGKAKALDG-TMVSAMVQINGLCRELYFLPR-------DGK 390
Query: 444 SIAQVYSE-FDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA----- 497
S A + E + +Y + + +++ KKYAF LP +P EYL+V + P
Sbjct: 391 SAADIEEEILPLLMDKYGLNNIRAKPESKKYAFELPDIPHEKEYLKVLLPYETPKCSHDL 450
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEV 552
LP DLS D FSHVFG ++ +E+ +++ + GP WLE A+ K S C EV
Sbjct: 451 LPPDLSSDNFSHVFGGNANIVESFVVQNNVMGPCWLEIKNADFKALQNASHCAIEV 506
>gi|365987994|ref|XP_003670828.1| hypothetical protein NDAI_0F02670 [Naumovozyma dairenensis CBS 421]
gi|343769599|emb|CCD25585.1| hypothetical protein NDAI_0F02670 [Naumovozyma dairenensis CBS 421]
Length = 1294
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 248/653 (37%), Positives = 375/653 (57%), Gaps = 36/653 (5%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK--NKK 607
+ +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ K ++
Sbjct: 592 FRIQMLSLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFTRNGFIVPDKETNKMRTQR 650
Query: 608 EGEETGEANKGKG---RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+ ++ G+ G KKA Y GGLV EP+KG + +I++MDFNSLYPSIIQEYNICFT
Sbjct: 651 QRKQMGDQQDGDAPVSSKKAKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEYNICFT 710
Query: 665 TIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
T V QD DI L E +P + G+LP + LV+ RR+VK +MK +Q
Sbjct: 711 T--VERNQD-DIDELPE-VPSSDIAQGVLPRLLANLVDRRREVKKIMKTET-DPHKKIQC 765
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGD 784
DIRQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGD
Sbjct: 766 DIRQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGD 825
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+MI + Y KIGN K N+ YK LE+DID V+K +LL KKKYAAL+++
Sbjct: 826 TDSVMIDTGCDTYADAIKIGNDFKKLVNERYKLLEIDIDNVFKRLLLHAKKKYAALNVTL 885
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+G + E+KG+D+ RR++ L+ + V++ IL +D + LQ I+ +++
Sbjct: 886 NKDGSERLTLEVKGLDMKRREFCPLSKDVSTHVLNTIL-----SDKDPEAALQEIYGYLE 940
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
IR ++N + + +I +L+K P+ Y K +P VQVAL++ + +K G I++
Sbjct: 941 DIRNKMENNEIRVDKYKINMKLSKDPQAYPGGKNMPAVQVALKMRKA-GRVVKAGSVITF 999
Query: 965 IIC----EDGTSE---AATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+I E+G + + RA+ + E + ++KL D YYL +QI V RLLE IE
Sbjct: 1000 VITKGKQEEGKEDEKLSPADRAFALNEVMVKSNKLIPDAEYYLEKQIFSPVERLLERIES 1059
Query: 1017 TDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ 1076
D VR++E LGLD+ Y + + + + + +F D P+C
Sbjct: 1060 FDVVRLSEALGLDSKKYLRRNDNINSNNIDALQPLETTISDMERFKDATTLDLHCPNCSS 1119
Query: 1077 VNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC 1136
+ + + + +C N E K+ ++ + L ++L + +I YY GWL C
Sbjct: 1120 EFPFGGIVPSNHYLMCYNGLQCKNCE-KI--FSTI-QLTSQLESSIRSHISLYYAGWLIC 1175
Query: 1137 EDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICD 1186
+D C ++TR+ + K L CT +Y+ YT+ QLY QL +F + D
Sbjct: 1176 DDITCGNVTRQISVFGKRCLNDGCTGVMRYR----YTDKQLYNQLLYFDSLFD 1224
Score = 86.3 bits (212), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 19/186 (10%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE 441
F+ F+LD F ++ T+ LFGK + S S V + + R++Y LPR + +
Sbjct: 178 FQFFWLD-FTEVN---NTLVLFGKAKTLDG-SFISAMVQINGLCRELYFLPRENNTPEEI 232
Query: 442 PVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPA---- 497
I + E +Y + + +++ +KKYAF LP +P + YL+V P
Sbjct: 233 HEEIVPLLLE------KYGLDNIRAKPEKKKYAFELPDIPHEANYLKVLMPFNTPKSSND 286
Query: 498 -LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS--RISWCKYEVQC 554
+P DLS DTFSHVFG ++ E +++ KI GP WLE + + F + S C EV
Sbjct: 287 LIPPDLSSDTFSHVFGGNTNIFEAFVVQNKIMGPCWLEIKDGD-FTALQNASHCSIEVAV 345
Query: 555 NQMEKI 560
N+ + +
Sbjct: 346 NKPQNV 351
>gi|297808923|ref|XP_002872345.1| hypothetical protein ARALYDRAFT_327035 [Arabidopsis lyrata subsp.
lyrata]
gi|297318182|gb|EFH48604.1| hypothetical protein ARALYDRAFT_327035 [Arabidopsis lyrata subsp.
lyrata]
Length = 1376
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 268/698 (38%), Positives = 382/698 (54%), Gaps = 102/698 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKKEGE------- 610
+++TN+ GN+ TL G R++RNE+ LLH FH + Y+LPDK Q+ K +K +
Sbjct: 698 LQLTNISGNLWGNTLQGARAQRNEYYLLHTFHSRKYILPDKISQHMKERKSSKRRINHGP 757
Query: 611 --------------ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSII 656
E + NK K K AY+GGLVLEPKKG YDK+++L+DF+SLYPSII
Sbjct: 758 EDHNVDELDVDLALENDQGNKTK--KGPAYAGGLVLEPKKGLYDKYVLLLDFSSLYPSII 815
Query: 657 QEYNICFTTIPVRMLQDSD-------ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKA 709
Q ++ R+ D I E+ P + ++ LV R+ VK
Sbjct: 816 QVSRPNIISVS-RLYHDQKTEFLVYPIVRHLEFFPRYLME---------HLVSIRKCVKL 865
Query: 710 LMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNT 769
M +L DIRQ+ALKLTANS YG LGF NSRF+ GREIL T
Sbjct: 866 KMNDSLKCREL----DIRQEALKLTANSFYGYLGFSNSRFY-----------GREILQRT 910
Query: 770 KSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
V+N LN EVIYGDTDS+MI ++D + V IG ++ E NK Y+ L++++DG+YK
Sbjct: 911 VDFVQNHLNLEVIYGDTDSIMIHSGLDDIEEVKAIGAKVIQEVNKKYRCLKIELDGIYKR 970
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
MLLL+KKKYAA+ + + +GK+ E KGVD+VRRDWS L+ E G +++IL
Sbjct: 971 MLLLRKKKYAAIKL-QFKDGKICEEIERKGVDMVRRDWSLLSKEIGDVCLAKIL-----C 1024
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
S +D ++ IH + KI+ ++ NG V L ITK L+K+PE Y D K+ PHVQVALR+
Sbjct: 1025 GGSCEDVVEAIHNELMKIKEEMRNGQVALEKYVITKALSKSPEAYPDSKSQPHVQVALRM 1084
Query: 949 NNTNSKK-LKQGDTISYIIC-EDGTSEAAT-----QRAYNIEELKN-NSKLKIDVNYYLS 1000
K+ DT+ YIIC E G A+ +RA + E+K+ +S+ +D++YYL+
Sbjct: 1085 RQRGYKEGFSAKDTVPYIICYEQGNPSLASSVGIVERARHPAEVKSEDSRWLVDIDYYLA 1144
Query: 1001 QQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENI-LGVGEAEEVKY 1059
QQIHPVV+RL I+GT R+AECLGLD S YRS+ NI G + + +
Sbjct: 1145 QQIHPVVSRLCAEIQGTSPERLAECLGLDPSKYRSR---------SNITTGSDPSTSLLF 1195
Query: 1060 QFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLI-NKL 1118
D+ C + CK+ +T E+ + + ++ C+ E + P +I N++
Sbjct: 1196 ATSDEESSVCAS-ICKKSDTEESDS------IFWLKRHCLKCEAEGSTRRISPAMIANQV 1248
Query: 1119 SQDMNKYIVKYYEGWLKCEDPGCSDLTRRCP----LGLKTRLCTTCHKY-----KLHRVY 1169
+ ++ ++ YY+G + C+D C T R P LG + R T C Y R Y
Sbjct: 1249 KRQIDGFVSMYYKGIMMCDDESCK-YTTRSPNFRLLGDRER-GTVCPNYPNCNGTFLRKY 1306
Query: 1170 TELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYM 1207
TE LY+QLS+F +I D +L K D +K E M
Sbjct: 1307 TEADLYRQLSYFCHILDTQYSLEKMDV-GVKIQVEKAM 1343
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 36/268 (13%)
Query: 330 TSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRM----- 384
+ P P +V ++ + +Q P H D+ + + +K F +
Sbjct: 190 SEPTPSIVSMEKEQATSTMEMQDSPEFEVIPPHDSRQSDANQVFKLNACQKEFDLGADGS 249
Query: 385 ---FFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTK 440
+ LDA+E+ + G +YLFGKV K +++ SCC +V+ I R +Y +P +
Sbjct: 250 LLFYILDAYEEPFGASKGIIYLFGKV--KTGDTYKSCCAVVKYIQRCVYAIPNDTIFPSH 307
Query: 441 EPVSIAQ----------------------VYSEFDQIATQYKILDFKSRKIEKKYAFNLP 478
E +++ Q + E Q Q + ++ +++ YAF+ P
Sbjct: 308 EIMTLEQEVKESRLSPESFRGKLHEMASKLKKEISQQLLQLNVSNYSMALVKRNYAFDRP 367
Query: 479 GVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP- 536
VP +Y L++ Y K P LP DL G++F V G+ +S LE +L+RKI GPSWL+
Sbjct: 368 DVPAREQYVLKINYPFKDPPLPEDLKGESFCAVLGSHTSALELFILKRKIMGPSWLKISI 427
Query: 537 -EAEKFPSRISWCKYEVQCNQMEKIRIT 563
A R+SWCK EV + I ++
Sbjct: 428 FSATLKSQRVSWCKSEVTVESPKVITVS 455
>gi|32329593|gb|AAP45774.1| DNA polymerase catalytic subunit alpha [Stylonychia lemnae]
Length = 1514
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 272/725 (37%), Positives = 404/725 (55%), Gaps = 69/725 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E
Sbjct: 801 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDLRRGFMGDEYEEN 860
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
+ G KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R
Sbjct: 861 DTKGGGKKGGKRKKAKYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 920
Query: 670 MLQDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALM 711
++ D + L LP+ V+ +LP+ ++ LV+ R+ VK M
Sbjct: 921 PTKNYDGSELKNQFKSADNAEGDEVEDVDLPDKNVNIKDAVLPNVLRDLVQKRKAVKEKM 980
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
K L Q +IRQKA+KLTANSMYGCLGF +SRF A +AAL+T GRE LL TK
Sbjct: 981 KNEK-DQVKLQQLEIRQKAIKLTANSMYGCLGFSSSRFHASAIAALITKTGRETLLRTKD 1039
Query: 772 LVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYML 830
+ EN L + V+YGDTDS+MI+ N ++G ++K E N LYK LE++IDGV+K +L
Sbjct: 1040 IAENKLGFNVVYGDTDSIMINTGTNQLQQSLEMGKKLKVEVNCLYKCLEIEIDGVFKSLL 1099
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD- 889
LLKKKKYAAL + + ++ QE+KG+D+VRRDW L+ G +V+SQIL + D
Sbjct: 1100 LLKKKKYAALRYEGVGSNEVXVIQEMKGLDMVRRDWCPLSKSIGNYVLSQILSGKQREDV 1159
Query: 890 -YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
++L++ L +I E MK R LD F+ ITKQLT+A EY+D K PHV VA RL
Sbjct: 1160 VFNLNEYLSDIGEKMKSNRITLDQ-FI------ITKQLTRAISEYSDIKGQPHVAVAQRL 1212
Query: 949 NNTN-SKKLKQGDTISYIICEDGTSEAATQ-----RAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I A + +AY+ +E L + K+ +D+++Y++
Sbjct: 1213 KNQGKSEADLVNNFIPYVIGAQAFDTAKSNPQLSDKAYHPDELLSSKGKITLDIDWYITT 1272
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--------SQIKESIQQSEENILGVGE 1053
QI P +TRL+E I+G + +A+CLG+D Y+ +I + + IL
Sbjct: 1273 QILPPITRLIEHIDGINIEFVAQCLGVDPKKYKYHSEKKNTDEIGDDGGSIQNPILQTET 1332
Query: 1054 AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH 1113
+ +K++ + + C PSC + + P V L C K+P +
Sbjct: 1333 EKSLKHRSIAELKVKC--PSC--THNYDFPGIYQEGKDVSGLI-CTKCNAKIPE----KY 1383
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQ 1173
++N+++ + + + YY+G +C++P C +TR+ K + TC K K+ Y+E Q
Sbjct: 1384 VMNRVNLFLKQLLALYYQGKYECQEPSCKSMTRQLLYHNKC-VNLTC-KGKMVPEYSEHQ 1441
Query: 1174 LYQQLSFFHYICDITKAL---TKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDL 1230
L + + +I K L +K+D+ ++ D Y Y ++ V+ + S YN VDL
Sbjct: 1442 TNDTLRYLQGLFNIKKHLHENSKNDSLKVETDIPFYNEYNVLQTKVDELMNRSKYNKVDL 1501
Query: 1231 KKLFS 1235
+F
Sbjct: 1502 GSIFG 1506
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 135/559 (24%), Positives = 261/559 (46%), Gaps = 51/559 (9%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKR 100
+ GR ++ K+ A +L+ + G K ++ +E ++EE+ EY +R
Sbjct: 8 QSGREIKKIGQKSGVKNALAQLRAAREGGDKRTDQYQVEEAKRIFEEIDADEYERIQDQR 67
Query: 101 QEDDWIDDDGGDGYVEDGREIFD-DDIEDVPQKKEKHDKRKKNKNIQN---PNA---KGD 153
+ DD+I DD G GY + G EI++ DD E+V KK+K ++I N P + K
Sbjct: 68 KNDDFIVDDDGFGYRDHGGEIWERDDNEEVGGKKKKRKLDPNEQHITNFMMPASTIRKNK 127
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+N+ +K+K K + + D++ +LL E++ L+ + + ++ +P A
Sbjct: 128 GTGNSSNIQIKQKPKVTAE-QSMDIMNNLLQELDNKDVDELE-DVNASAVMAELNKPIAF 185
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
E L N + +E K E +K++ + E ++ + + N SK+ +D+
Sbjct: 186 NKNEELLN-KYGVTLESKQEIQVKRQLEQQQHE----QTIGQHQQNANVFSKKRKLDEIQ 240
Query: 274 WEQMQID--DWDNSQQTQDVLPEQAKVEL-----QIEAIESQSIEEKVDVTNVESVSSAV 326
Q++ + + + S+QT+ ++ + + Q+ +S + VD + + SSA
Sbjct: 241 QPQVKKEHQELNKSRQTETIIHQSSNTSYFDAKSQLSHDQSMDYQSAVDDSKMSESSSAQ 300
Query: 327 ELSTSPPPQVVEKKE-----HKCAEWEAIQTEPSTSEPQ---VHSRTADD----SLPLAT 374
+ + + P K + K EW I+ + + + + ++A D +LPL
Sbjct: 301 KNAMNEGPIAFSKNQTNMSASKNDEWAQIKHQNQQAHQEFKTMEQKSAMDIQEFALPLNQ 360
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
D + +DA E+ +++FGK+F E N + SC + V + R+IY LP+
Sbjct: 361 DGS----LSFYXIDAHEE--NNGADLFIFGKIFQPEINQYVSCSMKVNGMQREIYALPKM 414
Query: 435 EHLKTKEPVS-------IAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSE 485
+ K + ++ + V E + I + I ++ + + +KYAF +P
Sbjct: 415 QKGKARGTLTREDENQLVRGVQLELEDIRKKRFQGITKWRCKPVTRKYAFEMPIQHGEHL 474
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-R 544
+L+++Y A LPS + G+TF +FG+ S LE +L+RKIKGP W+ +K +
Sbjct: 475 FLKIKYDATFIPLPSTVQGNTFECLFGSNQSMLELFILKRKIKGPCWMTIKNPKKVTDFK 534
Query: 545 ISWCKYEVQCNQMEKIRIT 563
+WC+ E++ + +T
Sbjct: 535 KTWCRQEIEIENPKNAEVT 553
>gi|348682637|gb|EGZ22453.1| hypothetical protein PHYSODRAFT_496258 [Phytophthora sojae]
Length = 1536
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 249/702 (35%), Positives = 376/702 (53%), Gaps = 94/702 (13%)
Query: 561 RITNVCGNVLSRTLMGG-RSERNEFLLLHAFH--EKSYVLPDKQYGKNKKEGEETGEANK 617
++ N+CG + +RTL R+ER E+LLLH F + +++P+K + EA+K
Sbjct: 803 QLANLCGYLWTRTLEANKRAERIEYLLLHEFSRSKNKFIVPEKFKTRT--------EADK 854
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM------- 670
R++A+Y+GG+V PKKG YD F++L+DF SLYPSII+EYNICFTT+ ++
Sbjct: 855 SNKRREASYAGGMVFAPKKGLYDNFVVLLDFMSLYPSIIREYNICFTTVERQLNEDVPGA 914
Query: 671 ------------------------------LQDSDITTLCEY--LPEHQVDTGILPSEIK 698
L ++D + E LP + GILP+ IK
Sbjct: 915 PSASKKKKKSKPMPQPENDEVVDDEDVDQNLDNADASADSEIPALPSSASEPGILPAVIK 974
Query: 699 KLVESRRQVKALMK--QPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAA 756
+L+ESR+QVK +K Q + + + DIRQKA+KLTANSMYGCLGF SRF+A+P+AA
Sbjct: 975 RLLESRKQVKQQLKIEQKEGNVEKAIMLDIRQKAIKLTANSMYGCLGFRFSRFYAKPIAA 1034
Query: 757 LVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY 815
L+T+ GR+ L K + E Y+VIYGDTDS+M+ D +IG +I+++CNK +
Sbjct: 1035 LITSTGRQTLQRAKEVAEQECGYDVIYGDTDSIMVDSRTETLDEAKRIGREIQAQCNKHF 1094
Query: 816 KQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGK 875
K LEL++D ++K +LLL KKKYAAL + + N + +E+KG+D+VRRDW ++ G
Sbjct: 1095 KLLELEVDYIFKRILLLNKKKYAALVLKERPNSEPTFVKEVKGLDMVRRDWCVISKAVGN 1154
Query: 876 FVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTD 935
V+ IL + S DD +++IHEH++++ + +G P+ ITK L K PE+Y D
Sbjct: 1155 EVLDFIL-----SGNSRDDVVESIHEHLEQVAERMRSGKEPIAQYVITKSLNKQPEQYPD 1209
Query: 936 RKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEEL-KNNSKLKID 994
R HVQVAL L K + G I Y++C++ + +RAY+ +E+ + KL ID
Sbjct: 1210 RAKQYHVQVALALRAL-GKPVGAGTHIPYVLCKE-EEPGSGRRAYHPDEVTRAGGKLNID 1267
Query: 995 VNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSE--ENILGVG 1052
V +YL QIHP V RL IEGT + ++A CLGLDT+ + ++++ + I V
Sbjct: 1268 VEWYLESQIHPPVNRLCAHIEGTSSPQLAHCLGLDTAKFSHSANHFGEENDGGDAIPSVL 1327
Query: 1053 EAEEVKYQFCDKFEFTCMNPSCKQVN-------TVEAPTRLSTHGVVFVLDECINPECKV 1105
+ + +++ C E TC CK + T E + LS+ + P CK
Sbjct: 1328 QNDADRFKDCVPLEITC--DRCKMASAFPGVFGTSEKDSSLSSG--------LLCPVCKA 1377
Query: 1106 PPYTYLPH-------------LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL 1152
+ + L N+L + KYYE W C D C T++ L
Sbjct: 1378 DFWGFDQEGIYGNVGDDLEAVLSNRLHIATREATKKYYEAWTICSDVTCKTRTQKQSLRG 1437
Query: 1153 KTRLCTTCH-KYKLHRVYTELQLYQQLSFFHYICDITKALTK 1193
+C+ + Y + LY QL +F + D+ +A K
Sbjct: 1438 NGNICSAAGCRATTTLEYPDSALYTQLKYFESLFDVERAQKK 1479
Score = 106 bits (264), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 128/250 (51%), Gaps = 32/250 (12%)
Query: 342 HKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVY 401
++ AEW + + S V AD++ P A + +M+++DA E + ++PG +Y
Sbjct: 303 NEVAEWWNVAGDDSN----VKMEDADEAEPEAPVGAADSI-QMYWMDAVE-VRERPGKIY 356
Query: 402 LFGKVFV------KENNSHSSCCVIVQNIDRKIYLLPRSEHL----KTKEPVSIAQVYSE 451
L GK+ + K+ + SCCV+V N+ R +YL+P+ L +T++ + Q++ E
Sbjct: 357 LIGKIKIPSPEGSKQPPTFRSCCVVVNNLQRYMYLVPKGTPLNELSETEQQEAWMQMHEE 416
Query: 452 FDQIATQYKILD------FKSRKIEKKYAF---NLPGVPDLSEYLEVRYSAKCPALPSDL 502
+ I F+++ +E+ YAF N+P +L +L+V+Y A+ PA PSD
Sbjct: 417 IHNVLIPSCITSRRDQEVFRTKLVERNYAFEEANIPRGKNL--FLKVKYPARYPAPPSDF 474
Query: 503 ---SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEK 559
G TF+ + G + LEN LL R++ GP W+E K +S+CK E + +
Sbjct: 475 CSRGGKTFTRICGAFTRPLENFLLTRRLLGPGWVEIKNVRKCNEGVSFCKMEFET--FDP 532
Query: 560 IRITNVCGNV 569
+T + G +
Sbjct: 533 KNVTPIAGGM 542
>gi|32329597|gb|AAP45776.1| DNA polymerase catalytic subunit alpha [Stylonychia lemnae]
Length = 1514
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 273/725 (37%), Positives = 406/725 (56%), Gaps = 69/725 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E
Sbjct: 801 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDLRRGFMGDEYEEN 860
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
+ G KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R
Sbjct: 861 DTKGGGKKGGKRKKAKYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 920
Query: 670 MLQDSDITTL-CEY---------------LPEHQVDT--GILPSEIKKLVESRRQVKALM 711
++ D + L +Y LP+ V+ +LP+ ++ LV+ R+ VK M
Sbjct: 921 PTKNYDGSELKNQYKSADNAEGDEVEDVDLPDKNVNIKDAVLPNVLRDLVQKRKAVKEKM 980
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
K L Q +IRQKA+KLTANSMYGCLGF +SRF A +AAL+T GRE LL TK
Sbjct: 981 KNEK-DQVKLQQLEIRQKAIKLTANSMYGCLGFSSSRFHASAIAALITKTGRETLLRTKD 1039
Query: 772 LVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYML 830
+ EN L + V+YGDTDS+MI+ N ++G ++K E N LYK LE++IDGV+K +L
Sbjct: 1040 IAENKLGFNVVYGDTDSIMINTGTNQLQQSLEMGKKLKVEVNCLYKCLEIEIDGVFKSLL 1099
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD- 889
LLKKKKYAAL + + ++ QE+KG+D+VRRDW L+ G +V+SQIL + D
Sbjct: 1100 LLKKKKYAALRYEGVGSNEVKVIQEMKGLDMVRRDWCPLSKSIGNYVLSQILSGKQREDV 1159
Query: 890 -YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
++L++ L +I E MK R LD F+ ITKQLT+A EY+D K PHV VA RL
Sbjct: 1160 VFNLNEYLSDIGEKMKSNRITLDQ-FI------ITKQLTRAISEYSDIKGQPHVAVAQRL 1212
Query: 949 NNTN-SKKLKQGDTISYIICEDGTSEAATQ-----RAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I A + +AY+ +E L + K+ +D+++Y++
Sbjct: 1213 KNQGKSEADLVNNFIPYVIGAQAFDTAKSNPQLSDKAYHPDELLSSKGKITLDIDWYITT 1272
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--------SQIKESIQQSEENILGVGE 1053
QI P +TRL+E I+G + +A+CLG+D Y+ +I + + IL
Sbjct: 1273 QILPPITRLIEHIDGINIEFVAQCLGVDPKKYKYHSEKKNTDEIGDDGGSIQNPILQTET 1332
Query: 1054 AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH 1113
+ +K++ + + C PSC + + P V L C K+P +
Sbjct: 1333 EKSLKHRSIAELKVKC--PSC--THNYDFPGIYQEGKDVSGLI-CTKCNAKIPE----KY 1383
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQ 1173
++N+++ + + + YY+G +C++P C +TR+ K + TC K K+ Y+E Q
Sbjct: 1384 VMNRVNLFLKQLLALYYQGKYECQEPSCKSMTRQLLYHNKC-VNLTC-KGKMVPEYSEHQ 1441
Query: 1174 LYQQLSFFHYICDITKAL---TKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDL 1230
L + + +I K L +K+D+ ++ D Y Y ++ V+ + S YN VDL
Sbjct: 1442 TNDTLRYLQGLFNIKKHLHENSKNDSLKVETDIPFYNEYNVLQTKVDELMNRSKYNKVDL 1501
Query: 1231 KKLFS 1235
+F
Sbjct: 1502 GSIFG 1506
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 135/559 (24%), Positives = 263/559 (47%), Gaps = 51/559 (9%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKR 100
+ GR ++ K+ A +L+ + G K ++ +E ++EE+ EY +R
Sbjct: 8 QSGREIKKIGQKSGVKNALAQLRAAREGGDKRTDQYQVEEAKRIFEEIDADEYERIQDQR 67
Query: 101 QEDDWIDDDGGDGYVEDGREIFD-DDIEDVPQKKEKHDKRKKNKNIQN---PNA---KGD 153
+ DD+I DD G GY + G EI++ DD E+V KK+K ++I N P + K
Sbjct: 68 KNDDFIVDDDGFGYRDHGGEIWERDDNEEVGGKKKKRKLDPNEQHITNFMMPASTIRKNK 127
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+N+ +K+K K + + D++ +LL E++ L+ + + ++ +P A
Sbjct: 128 GTGNSSNIQIKQKPKVTAE-QSMDIMNNLLQELDNKDVDELE-DVNASAVMAELNKPIAF 185
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
E L N + +E K E +K++ + E ++ + + N SK+ +D+
Sbjct: 186 NKNEELLN-KYGVTLESKQEIQVKRQLEQQQHE----QTIGQHQQNANVFSKKRKLDEIQ 240
Query: 274 WEQMQID--DWDNSQQTQDVLPEQAKVEL-----QIEAIESQSIEEKVDVTNVESVSSAV 326
Q++ + + + S+QT+ ++ + + Q+ +S + VD + + SSA
Sbjct: 241 QPQVKKEHQELNKSRQTETIIHQSSNTSYFDAKSQLSHDQSMEYQSAVDDSKMSESSSAQ 300
Query: 327 ELSTSPPPQVVEKKE-----HKCAEWEAIQTEPSTSEPQ---VHSRTADD----SLPLAT 374
+ + + P K + K EW I+ + + + + ++A D +LPL
Sbjct: 301 KNAMNEGPIAFSKNQTNMSASKNDEWAQIKHQNQQAHQEFKTMEQKSAMDIQEFALPLNQ 360
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
D +++DA E+ +++FGK+F E N + SC + V + R+IY LP+
Sbjct: 361 DGS----LSFYWIDAHEE--NNGADLFIFGKIFQPEINQYVSCSMKVNGMQREIYALPKM 414
Query: 435 EHLKTKEPVS-------IAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSE 485
+ K + ++ + V E + I + I ++ + + +KYAF +P
Sbjct: 415 QKGKARGTLTREEENQLVRGVQLELEDIRKKRFQGITKWRCKPVTRKYAFEMPIQHGEHL 474
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-R 544
+L+++Y A LPS + G+TF +FG+ S LE +L+RKIKGP W+ +K +
Sbjct: 475 FLKIKYDATFIPLPSTVQGNTFECLFGSNQSMLELFILKRKIKGPCWMTIKNPKKVTDFK 534
Query: 545 ISWCKYEVQCNQMEKIRIT 563
+WC+ E++ + + +T
Sbjct: 535 KTWCRQEIEIDNPKNAEVT 553
>gi|32329591|gb|AAP45773.1| DNA polymerase catalytic subunit alpha [Stylonychia lemnae]
Length = 1514
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 272/725 (37%), Positives = 404/725 (55%), Gaps = 69/725 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E
Sbjct: 801 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDLRRGFMGDEYEEN 860
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
+ G KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R
Sbjct: 861 DTKGGGKKGGKRKKAKYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 920
Query: 670 MLQDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALM 711
++ D + L LP+ V+ +LP+ ++ LV+ R+ VK M
Sbjct: 921 PTKNYDGSELKNQFKSADNAEGDEVEDVDLPDKNVNIKDAVLPNVLRDLVQKRKAVKEKM 980
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
K L Q +IRQKA+KLTANSMYGCLGF +SRF A +AAL+T GRE LL TK
Sbjct: 981 KNEK-DQVKLQQLEIRQKAIKLTANSMYGCLGFSSSRFHASAIAALITKTGRETLLRTKD 1039
Query: 772 LVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYML 830
+ EN L + V+YGDTDS+MI+ N ++G ++K E N LYK LE++IDGV+K +L
Sbjct: 1040 IAENKLGFNVVYGDTDSIMINTGTNQLQQSLEMGKKLKVEVNCLYKCLEIEIDGVFKSLL 1099
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD- 889
LLKKKKYAAL + + ++ QE+KG+D+VRRDW L+ G +V+SQIL + D
Sbjct: 1100 LLKKKKYAALRYEGVGSNEVKVIQEMKGLDMVRRDWCPLSKSIGNYVLSQILSGKQREDV 1159
Query: 890 -YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
++L++ L +I E MK R LD F+ ITKQLT+A EY+D K PHV VA RL
Sbjct: 1160 VFNLNEYLSDIGEKMKSNRITLDQ-FI------ITKQLTRAISEYSDIKGQPHVAVAQRL 1212
Query: 949 NNTN-SKKLKQGDTISYIICEDGTSEAATQ-----RAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I A + +AY+ +E L + K+ +D+++Y++
Sbjct: 1213 KNQGKSEADLVNNFIPYVIGAQAFDTAKSNPQLSDKAYHPDELLSSKGKITLDIDWYITT 1272
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--------SQIKESIQQSEENILGVGE 1053
QI P +TRL+E I+G + +A+CLG+D Y+ +I + + IL
Sbjct: 1273 QILPPITRLIEHIDGINIEFVAQCLGVDPKKYKYHSEKKNTDEIGDDGGSIQNPILQTET 1332
Query: 1054 AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH 1113
+ +K++ + + C PSC + + P V L C K+P +
Sbjct: 1333 EKSLKHRSIAELKVKC--PSC--THNYDFPGIYQEGKDVSGLI-CTKCNAKIPE----KY 1383
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQ 1173
++N+++ + + + YY+G +C++P C +TR+ K + TC K K+ Y+E Q
Sbjct: 1384 VMNRVNLFLKQLLALYYQGKYECQEPSCKSMTRQLLYHNKC-VNLTC-KGKMVPEYSEHQ 1441
Query: 1174 LYQQLSFFHYICDITKAL---TKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDL 1230
L + + +I K L +K+D+ ++ D Y Y ++ V+ + S YN VDL
Sbjct: 1442 TNDTLRYLQGLFNIKKHLHENSKNDSLKVETDIPFYNEYNVLQTKVDELMNRSKYNKVDL 1501
Query: 1231 KKLFS 1235
+F
Sbjct: 1502 GSIFG 1506
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 134/559 (23%), Positives = 263/559 (47%), Gaps = 51/559 (9%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKR 100
+ GR ++ K+ A +L+ + G K ++ +E ++EE+ EY +R
Sbjct: 8 QSGREIKKIGQKSGVKNALAQLRAAREGGDKRTDQYQVEEAKRIFEEIDADEYERIQDQR 67
Query: 101 QEDDWIDDDGGDGYVEDGREIFD-DDIEDVPQKKEKHDKRKKNKNIQN---PNA---KGD 153
+ DD+I DD G GY + G EI++ DD E+V KK+K ++I N P + K
Sbjct: 68 KNDDFIVDDDGFGYRDHGGEIWERDDNEEVGGKKKKRKLDPNEQHITNFMMPASTIRKNK 127
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+N+ +K+K K + + D++ +LL E++ L+ + + ++ +P A
Sbjct: 128 GTGNSSNIQIKQKPKVTAE-QSMDIMNNLLQELDNKDVDELE-DVNASAVMAELNKPIAF 185
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
E L N + +E K E +K++ + E ++ + + N SK+ +D+
Sbjct: 186 NKNEELLN-KYGVTLESKQEIQVKRQLEQQQHE----QTIGQHQQNANVFSKKRKLDEIQ 240
Query: 274 WEQMQID--DWDNSQQTQDVLPEQAKVEL-----QIEAIESQSIEEKVDVTNVESVSSAV 326
Q++ + + + S+QT+ ++ + + Q+ +S + VD + + SSA
Sbjct: 241 QPQVKKEHQELNKSRQTETIIHQSSNTSYFDAKSQLSHDQSMEYQSAVDDSKMSESSSAQ 300
Query: 327 ELSTSPPPQVVEKKE-----HKCAEWEAIQTEPSTSEPQ---VHSRTADD----SLPLAT 374
+ + + P K + K EW I+ + + + + ++A D +LPL
Sbjct: 301 KNAMNEGPIAFSKNQTNMSASKNDEWAQIKHQNQQAHQEFKTMEQKSAMDIQEFALPLNQ 360
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
D +++DA E+ +++FGK++ E N + SC + V + R+IY LP+
Sbjct: 361 DGS----LSFYWIDAHEE--NNGADLFIFGKIYQPEINQYVSCSMKVNGMQREIYALPKM 414
Query: 435 EHLKTKEPVS-------IAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSE 485
+ K + ++ + V E + I + I ++ + + +KYAF +P
Sbjct: 415 QKGKARGTLTREEENQLVRGVQLELEDIRKKRFQGITKWRCKPVTRKYAFEMPIXHGEHL 474
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-R 544
+L+++Y A LPS + G+TF +FG+ S LE +L+RKIKGP W+ +K +
Sbjct: 475 FLKIKYDATFIPLPSTVQGNTFECLFGSNQSMLELFILKRKIKGPCWMTIKNPKKVTDFK 534
Query: 545 ISWCKYEVQCNQMEKIRIT 563
+WC+ E++ + + +T
Sbjct: 535 KTWCRQEIEIDNPKNAEVT 553
>gi|32329601|gb|AAP45778.1| DNA polymerase catalytic subunit alpha [Stylonychia lemnae]
Length = 1514
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 272/725 (37%), Positives = 404/725 (55%), Gaps = 69/725 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E
Sbjct: 801 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDLRRGFMGDEYEEN 860
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
+ G KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R
Sbjct: 861 DTKGGGKKGGKRKKAKYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 920
Query: 670 MLQDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALM 711
++ D + L LP+ V+ +LP+ ++ LV+ R+ VK M
Sbjct: 921 PTKNYDGSELKNQFKSADNAEGDEVEDVDLPDKNVNIKDAVLPNVLRDLVQKRKAVKEKM 980
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
K L Q +IRQKA+KLTANSMYGCLGF +SRF A +AAL+T GRE LL TK
Sbjct: 981 KNEK-DQVKLQQLEIRQKAIKLTANSMYGCLGFSSSRFHASAIAALITKTGRETLLRTKD 1039
Query: 772 LVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYML 830
+ EN L + V+YGDTDS+MI+ N ++G ++K E N LYK LE++IDGV+K +L
Sbjct: 1040 IAENXLGFNVVYGDTDSIMINTGTNQLQQSLEMGKKLKVEVNCLYKCLEIEIDGVFKSLL 1099
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD- 889
LLKKKKYAAL + + ++ QE+KG+D+VRRDW L+ G +V+SQIL + D
Sbjct: 1100 LLKKKKYAALRYEGVGSNEVKVIQEMKGLDMVRRDWCPLSKSIGNYVLSQILSGKQREDV 1159
Query: 890 -YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
++L++ L +I E MK R LD F+ ITKQLT+A EY+D K PHV VA RL
Sbjct: 1160 VFNLNEYLSDIGEKMKSNRITLDQ-FI------ITKQLTRAISEYSDIKGQPHVAVAQRL 1212
Query: 949 NNTN-SKKLKQGDTISYIICEDGTSEAATQ-----RAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I A + +AY+ +E L + K+ +D+++Y++
Sbjct: 1213 KNQGKSEADLVNNFIPYVIGAQAFDTAKSNPQLSDKAYHPDELLSSKGKITLDIDWYITT 1272
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--------SQIKESIQQSEENILGVGE 1053
QI P +TRL+E I+G + +A+CLG+D Y+ +I + + IL
Sbjct: 1273 QILPPITRLIEHIDGINIEFVAQCLGVDPKKYKYHSEKKNTDEIGDDGGSIQNPILQTET 1332
Query: 1054 AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH 1113
+ +K++ + + C PSC + + P V L C K+P +
Sbjct: 1333 EKSLKHRSIAELKVKC--PSC--THNYDFPGIYQEGKDVSGLI-CTKCNAKIPE----KY 1383
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQ 1173
++N+++ + + + YY+G +C++P C +TR+ K + TC K K+ Y+E Q
Sbjct: 1384 VMNRVNLFLKQLLALYYQGKYECQEPSCKSMTRQLLYHNKC-VNLTC-KGKMVPEYSEHQ 1441
Query: 1174 LYQQLSFFHYICDITKAL---TKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDL 1230
L + + +I K L +K+D+ ++ D Y Y ++ V+ + S YN VDL
Sbjct: 1442 TNDTLRYLQGLFNIKKHLHENSKNDSLKVETDIPFYNEYNVLQTKVDELMNRSKYNKVDL 1501
Query: 1231 KKLFS 1235
+F
Sbjct: 1502 GSIFG 1506
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 136/561 (24%), Positives = 263/561 (46%), Gaps = 55/561 (9%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKR 100
+ GR ++ K+ A +L+ + G K ++ +E ++EE+ EY +R
Sbjct: 8 QSGREIKKIGQKSGVKNALAQLRAAREGGDKRTDQYQVEEAKRIFEEIXADEYERIQDQR 67
Query: 101 QEDDWIDDDGGDGYVEDGREIFD-DDIEDVPQKKEKHDKRKKNKNIQN---PNA---KGD 153
+ DD+I DD G GY + G EI++ DD E+V KK+K ++I N P + K
Sbjct: 68 KNDDFIVDDDGFGYRDHGGEIWERDDNEEVGGKKKKRKLDPNEQHITNFMMPASTIRKNK 127
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+N+ +K+K K + + D++ +LL E++ L+ + + ++ +P A
Sbjct: 128 GTGNSSNIQIKQKPKVTAE-QSMDIMNNLLQELDNKDVDELE-DVNASAVMAELNKPIAF 185
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
E L N + +E K E +K++ + E ++ + + N SK+ +D+
Sbjct: 186 NKNEELLN-KYGVTLESKQEIQVKRQLEQQQHE----QTIGQNQQNANVFSKKRKLDE-- 238
Query: 274 WEQMQI----DDWDNSQQTQDVLPEQAKVEL-----QIEAIESQSIEEKVDVTNVESVSS 324
+Q QI + + S+QT+ ++ + + Q+ +S + VD + + SS
Sbjct: 239 IQQPQIKKEHQELNKSRQTETIIHQSSXTSYFDAKSQLSHDQSMEYQSAVDDSKMSESSS 298
Query: 325 AVELSTSPPPQVVEKKE-----HKCAEWEAIQTEPSTSEPQ---VHSRTADD----SLPL 372
A + + + P K + K EW I+ + + + + ++A D +LPL
Sbjct: 299 AQKNAMNEGPIAFSKNQTNMSASKNDEWAQIKHQNQQAHQEFKTMEQKSAMDIQEFALPL 358
Query: 373 ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
D +++DA E+ +++FGK++ E N + SC + V + R+IY LP
Sbjct: 359 NQDGS----LSFYWIDAHEE--NNGADLFIFGKIYQPEINQYVSCSMKVNGMQREIYALP 412
Query: 433 RSEHLKTKEPVS-------IAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDL 483
+ + K + ++ + V E + I + I ++ + + +KYAF +P
Sbjct: 413 KMQKGKARGTLTREEENQLVRGVQLELEDIRKKRFQGITKWRCKPVTRKYAFEMPIQHGE 472
Query: 484 SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS 543
+L+++Y A LPS + G+TF +FG+ S LE +L+RKIKGP W+ +K
Sbjct: 473 HLFLKIKYDATFIPLPSTVQGNTFECLFGSNQSMLELFILKRKIKGPCWMTIKNPKKVTD 532
Query: 544 -RISWCKYEVQCNQMEKIRIT 563
+ +WC+ E++ + + +T
Sbjct: 533 FKKTWCRQEIEIDNPKNAEVT 553
>gi|32329595|gb|AAP45775.1| DNA polymerase catalytic subunit alpha [Stylonychia lemnae]
Length = 1514
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 272/724 (37%), Positives = 404/724 (55%), Gaps = 69/724 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E
Sbjct: 801 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDLRRGFMGDEYEEN 860
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
+ G KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R
Sbjct: 861 DTKGGGKKGGKRKKAKYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 920
Query: 670 MLQDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALM 711
++ D + L LP+ V+ +LP+ ++ LV+ R+ VK M
Sbjct: 921 PTKNYDGSELKNQFKSADNAEGDEVEDVDLPDKNVNIXDAVLPNVLRDLVQKRKAVKEKM 980
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
K L Q +IRQKA+KLTANSMYGCLGF +SRF A +AAL+T GRE LL TK
Sbjct: 981 KNEK-DQVKLQQLEIRQKAIKLTANSMYGCLGFSSSRFHASAIAALITKTGRETLLRTKD 1039
Query: 772 LVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYML 830
+ EN L + V+YGDTDS+MI+ N ++G ++K E N LYK LE++IDGV+K +L
Sbjct: 1040 IAENKLGFNVVYGDTDSIMINTGTNQLQQSLEMGKKLKVEVNCLYKCLEIEIDGVFKSLL 1099
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD- 889
LLKKKKYAAL + + ++ QE+KG+D+VRRDW L+ G +V+SQIL + D
Sbjct: 1100 LLKKKKYAALRYEGVGSNEVKVIQEMKGLDMVRRDWCPLSKSIGNYVLSQILSGKQREDV 1159
Query: 890 -YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
++L++ L +I E MK R LD F+ ITKQLT+A EY+D K PHV VA RL
Sbjct: 1160 VFNLNEYLSDIGEKMKSNRITLDQ-FI------ITKQLTRAISEYSDIKGQPHVAVAQRL 1212
Query: 949 NNTN-SKKLKQGDTISYIICEDGTSEAATQ-----RAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I A + +AY+ +E L + K+ +D+++Y++
Sbjct: 1213 KNQGKSEADLVNNFIPYVIGAQAFDTAKSNPQLSDKAYHPDELLSSKGKITLDIDWYITT 1272
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--------SQIKESIQQSEENILGVGE 1053
QI P +TRL+E I+G + +A+CLG+D Y+ +I + + IL
Sbjct: 1273 QILPPITRLIEHIDGINIEFVAQCLGVDPKKYKYHSEKKNTDEIGDDGGSIQNPILQTET 1332
Query: 1054 AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH 1113
+ +K++ + + C PSC + + P V L C K+P +
Sbjct: 1333 EKSLKHRSIAELKVKC--PSC--THNYDFPGIYQEGKDVSGLI-CTKCNAKIPE----KY 1383
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQ 1173
++N+++ + + + YY+G +C++P C +TR+ K + TC K K+ Y+E Q
Sbjct: 1384 VMNRVNLFLKQLLALYYQGKYECQEPSCKSMTRQLLYHNKC-VNLTC-KGKMVPEYSEHQ 1441
Query: 1174 LYQQLSFFHYICDITKAL---TKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDL 1230
L + + +I K L +K+D+ ++ D Y Y ++ V+ + S YN VDL
Sbjct: 1442 TNDTLRYLQGLFNIKKHLHENSKNDSLKVETDIPFYNEYNVLQAKVDELMNRSKYNKVDL 1501
Query: 1231 KKLF 1234
+F
Sbjct: 1502 GSIF 1505
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 134/559 (23%), Positives = 264/559 (47%), Gaps = 51/559 (9%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKR 100
+ GR ++ K+ A +L+ + G K ++ +E ++EE+ EY +R
Sbjct: 8 QSGREIKKIGQKSGVKNALAQLRAAREGGDKRTDQYQVEEAKRIFEEIDADEYERIQDQR 67
Query: 101 QEDDWIDDDGGDGYVEDGREIFD-DDIEDVPQKKEKHDKRKKNKNIQN---PNA---KGD 153
+ DD+I DD G GY + G EI++ DD E+V KK+K ++I N P + K
Sbjct: 68 KNDDFIVDDDGFGYRDHGGEIWERDDNEEVGGKKKKRKLDPNEQHITNFMMPASTIRKNK 127
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+N+ +K+K K + + D++ +LL E++ L+ + + ++ +P A
Sbjct: 128 GTGNSSNIQIKQKPKVTAE-QSMDIMNNLLQELDNKDVDELE-DVNASAVMAELNKPIAF 185
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
E L N + +E K E +K++ + E ++ + + N SK+ +D+
Sbjct: 186 NKNEELLN-KYGVTLESKQEIQVKRQLEQQQHE----QTIGQHQQNANVFSKKRKLDEIQ 240
Query: 274 WEQMQID--DWDNSQQTQDVLPEQAKVEL-----QIEAIESQSIEEKVDVTNVESVSSAV 326
Q++ + + + S+QT++++ + + Q+ +S + VD + + SSA
Sbjct: 241 QPQVKKEHQELNKSRQTENIIHQSSNTSYFDAKSQLSHDQSMEYQSAVDDSKMSESSSAQ 300
Query: 327 ELSTSPPPQVVEKKE-----HKCAEWEAIQTEPSTSEPQ---VHSRTADD----SLPLAT 374
+ + + P K + K EW I+ + + + + ++A D +LPL
Sbjct: 301 KNAMNEGPIAFSKNQTNMSASKNDEWAQIKHQNQQAHQEFKTMEQKSAMDIQEFALPLNQ 360
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
D +++DA E+ +++FGK++ E N + SC + V + R+IY LP+
Sbjct: 361 DGS----LSFYWIDAHEE--NNGADLFIFGKIYQPEINQYVSCSMKVNGMQREIYALPKM 414
Query: 435 EHLKTKEPVS-------IAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSE 485
+ K + ++ + V E + I + I ++ + + +KYAF +P
Sbjct: 415 QKGKARGTLTREEENQLVRGVQLELEDIRKKRFQGITKWRCKPVTRKYAFEMPIQHGEHL 474
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-R 544
+L+++Y A LPS + G+TF +FG+ S LE +L+RKIKGP W+ +K +
Sbjct: 475 FLKIKYDATFIPLPSTVQGNTFECLFGSNQSMLELFILKRKIKGPCWMTIKNPKKVTDFK 534
Query: 545 ISWCKYEVQCNQMEKIRIT 563
+WC+ E++ + + +T
Sbjct: 535 KTWCRQEIEIDNPKNAEVT 553
>gi|254578760|ref|XP_002495366.1| ZYRO0B09592p [Zygosaccharomyces rouxii]
gi|238938256|emb|CAR26433.1| ZYRO0B09592p [Zygosaccharomyces rouxii]
Length = 1456
Score = 391 bits (1005), Expect = e-105, Method: Compositional matrix adjust.
Identities = 266/734 (36%), Positives = 404/734 (55%), Gaps = 67/734 (9%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I+ + +Q + K ++TN+ GN S+TL G R+ RNE++LLH F Y+LPDK+ +
Sbjct: 739 IAEISFRIQLLSLTK-QLTNLAGNAWSQTLGGTRAGRNEYILLHEFSRNGYILPDKENSR 797
Query: 605 NK--KEGEETG--EANKGKG-----RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
N+ K + TG + + G G KKA Y GGLV EP+KG + ++++MDFNSLYPSI
Sbjct: 798 NRTSKRPDTTGAPDGDSGNGDPVVSSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSI 857
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALM---K 712
IQE+NICFTT+ R L+D+D L E +P + G+LP + LV+ RR+VK +M +
Sbjct: 858 IQEFNICFTTVD-RNLEDTD--ELPE-VPSNDGGKGVLPRLLANLVQRRREVKKIMATER 913
Query: 713 QPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSL 772
P+ + Q DI+Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L
Sbjct: 914 DPHKRT----QCDIKQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQL 969
Query: 773 VENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLL 832
E+L V+YGDTDS+MI ++Y K+GN+ K N+ YK LE+DID V+K +LL
Sbjct: 970 AESLELTVVYGDTDSVMIDSKCDNYADAIKVGNEFKKLVNERYKLLEIDIDNVFKKLLLH 1029
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KKKYAAL++S G E+KG+D+ RR++ L+ + V++ +L E
Sbjct: 1030 AKKKYAALTVSLDKEGNERTILEVKGLDMKRREFCPLSRDVSIHVLNTVLSEDDS----- 1084
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
+ L +I+E+++++R ++N + + +I +L+K P Y + K++P VQVALR+
Sbjct: 1085 EKALSDIYEYLERVRVQMENNEIRVDKYKINTKLSKDPNSYPNGKSMPAVQVALRMRKV- 1143
Query: 953 SKKLKQGDTISYIICEDGTSEAATQ---------RAYNIEELKNNSKLKIDVNYYLSQQI 1003
+ +K G I+++I + SE + RA N +K N+ L+ D YYL +QI
Sbjct: 1144 GRVVKAGTVITFVITKQDNSELEDKEIPPVPERARALNEVMVKGNN-LRPDPAYYLEKQI 1202
Query: 1004 HPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCD 1063
V RLLE IE D VR+ + LGLDT Y ++ Q +E + G+ + ++ D
Sbjct: 1203 FAPVERLLERIESFDVVRLTQSLGLDTRRYLNR----GQTAENSAGGIDSLQPLETTIPD 1258
Query: 1064 KFEFTCMNP---SCKQVNTVEAPTRLSTHGVVFVLDECINP-ECKVPPYTYLP-HLINKL 1118
F + P C Q + E P +++ C N +CK + + P L +L
Sbjct: 1259 AERFRDVQPLQIRCPQCDQ-EFPFGGIASSNHYMM--CYNGLQCKHCNHLFTPLQLTCQL 1315
Query: 1119 SQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQL 1178
+ + +I YY GW++C+D C++ RR R +H Y++ QLY QL
Sbjct: 1316 ERCIRLHISLYYAGWVQCDDRTCNNSVRRQISVFGKRCLNDGCTGVVHYRYSDKQLYNQL 1375
Query: 1179 SFFHYICDITKALTKSDTP-----------------SIKFDSETYMGYCKMKQH-VERFL 1220
+F + D K + P SIK SE Y + + V+++L
Sbjct: 1376 LYFDSLFDCEKNKRQQLKPLYVEGDTDFPRDLLTDSSIKALSEQNRDYLDVGRGVVQKYL 1435
Query: 1221 ESSAYNIVDLKKLF 1234
VD+ +F
Sbjct: 1436 GDCGRRYVDMSNIF 1449
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 225/522 (43%), Gaps = 99/522 (18%)
Query: 61 FQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVED 117
+KL+ L+ + D+ +Y+E+ EKEY R +K +E DD+++DD G GYV+
Sbjct: 8 LRKLQKLQASHGGNSGNDGNDDRLYDEIDEKEY--RHMKYKELLQDDFVEDDDGFGYVDR 65
Query: 118 GREIF------DDDIEDVPQKKEKHDKRKKNKNIQNPNAK-----GDIQKL-LANMPVKK 165
G E D+DIE+ K K K K+ N N GD+ +L A++ + K
Sbjct: 66 GVEDVEEDHYSDEDIENDNVNNRKKSKETKAKSANNNNGSSERNIGDMLRLQRASVQLNK 125
Query: 166 KKKEEVQLNN-DDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
K+ ++ DD+L + +E + PT + P PP+
Sbjct: 126 PTKKAKDIDEFDDILGEYENE--PMVKPTH---------IRPVLSPPSINRNN------- 167
Query: 225 PIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE--QSKEEPVDDGLWEQMQIDDW 282
V++ I P E+ + +++E N E + P+ ++ Q+D
Sbjct: 168 -TSVKRNI---------PASQEVSNKRLKVDLENNADEDFEMNSSPLKPRSIKRSQVDL- 216
Query: 283 DNSQQTQDV-----LPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVV 337
N++ T+D+ P+ + ++ + ++ + + P +V
Sbjct: 217 -NAEPTKDIGSSPTAPKSSGLQNDNKESNDDDDDD--------ESDDDIFVGRRPVKRVA 267
Query: 338 EKKEHKCAEWEAIQTEP--STSEPQVHSRTADDS--------LPLATDHENK-------- 379
K+E + P + PQ S+ S L L+T K
Sbjct: 268 AKREINLSSKSNFLASPVVAPGTPQSSSKAGSQSQRLSSPEPLNLSTGKLGKDQIVDPET 327
Query: 380 KVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKT 439
+ F+MF+LD E T+ LFGK+ ++ S S V + I R++Y+LPR +
Sbjct: 328 ESFQMFWLDFCE----VDNTLVLFGKIKARDG-SLVSGMVQINGICRELYILPRED---- 378
Query: 440 KEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP-- 496
K P V+ E + +Y + + +++ + KYAF LP +P ++YL+V P
Sbjct: 379 KTP---QDVHDEIIPLLMGKYGLDNIRAKSEKMKYAFELPDIPREADYLKVLMPINTPKC 435
Query: 497 ---ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEF 535
+P DLS DTF HVFG KSS E+ +++ KI GP WLE
Sbjct: 436 KYETIPPDLSSDTFYHVFGGKSSAFESFVVQNKIMGPCWLEI 477
>gi|363753528|ref|XP_003646980.1| hypothetical protein Ecym_5409 [Eremothecium cymbalariae DBVPG#7215]
gi|356890616|gb|AET40163.1| hypothetical protein Ecym_5409 [Eremothecium cymbalariae DBVPG#7215]
Length = 1475
Score = 391 bits (1005), Expect = e-105, Method: Compositional matrix adjust.
Identities = 256/679 (37%), Positives = 382/679 (56%), Gaps = 56/679 (8%)
Query: 541 FPSRISW-CKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPD 599
F S+I+ + +Q + K ++TN+ GN +TL G R+ RNEF+LLH F+ +Y++PD
Sbjct: 755 FASKIAAEIAFRIQILPLTK-QLTNLAGNAWCQTLGGTRAGRNEFILLHEFNRSNYIVPD 813
Query: 600 KQYG--KNKKE--GEETGEANKGK----GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
K+ +N K+ ET +N G KK Y GGLV EP+KG + ++++MDFNSL
Sbjct: 814 KETKQMRNSKQHKANETTTSNDGNQTSASNKKPKYQGGLVFEPEKGLHKNYVLVMDFNSL 873
Query: 652 YPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALM 711
YPSIIQE+NICFTT+ DI L E +P + G+LP + LV+ RR+VK LM
Sbjct: 874 YPSIIQEFNICFTTVE---RDPGDIEQLPE-VPPSGIVQGVLPKLLANLVQRRREVKKLM 929
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
K + + DIRQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+
Sbjct: 930 KL-EIDPQKKAECDIRQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQ 988
Query: 772 LVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLL 831
L E+L VIYGDTDS+MI ++Y IG K N+ YK LE+DID V+K +LL
Sbjct: 989 LAESLALSVIYGDTDSVMIDTGCDNYKESVNIGENFKKLVNERYKLLEIDIDNVFKKLLL 1048
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KKKYAAL++ G S E+KG+D+ RR++ L+ E V++ IL +D
Sbjct: 1049 HAKKKYAALNVGFDKLGNETSSLEVKGLDMRRREYCPLSKEVSTQVLNTIL-----SDKD 1103
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
L+ LQ ++E M++IR+ ++N + + +I +L+K P+ Y + K++P VQVAL++
Sbjct: 1104 LESALQEVYEFMEEIRSKIENNEIRVDKYKINTKLSKDPKSYPNGKSMPAVQVALKMREA 1163
Query: 952 NSKKLKQGDTISYIICE--------DGTSEAATQRAYNIEELKN-NSKLKIDVNYYLSQQ 1002
K +K G I+++I + D ++ + RAY + ++ N ++L D YYL +Q
Sbjct: 1164 -GKVIKAGSVITFVITKGPQGKDSTDSSNSSPADRAYPLHDVMNKRNELAPDPKYYLEKQ 1222
Query: 1003 IHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFC 1062
I V R+LE +E D VR++E LGLD+ Y +++ E N + ++
Sbjct: 1223 IFAPVERILERVESFDIVRLSESLGLDSRRYINRVGSG---GELNGGSSSNLQPLESTIS 1279
Query: 1063 DKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINP--------ECKVPPYTY-LPH 1113
D F K ++ + H F N +CK + + L
Sbjct: 1280 DTERF-------KDTEWLDITCSICQHKFPFGGITASNHYQWTYNGLQCKHCDHLFSLIE 1332
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYT 1170
L +L + + +I YY GWL C+DP C++LTR+ + K L CT +Y+ Y+
Sbjct: 1333 LTCQLERSIRSHISLYYAGWLLCDDPTCNNLTRQISVFGKRCLNENCTGVMRYR----YS 1388
Query: 1171 ELQLYQQLSFFHYICDITK 1189
+ +LY QL +F + DI K
Sbjct: 1389 DKKLYNQLLYFDSLFDIEK 1407
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 220/497 (44%), Gaps = 72/497 (14%)
Query: 77 EFTADENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDGREIFDDDIEDVPQKK 133
E A+ VY+ V E ++ ER R+E DD++ DD G GY+ G + +D ++
Sbjct: 31 ELAAESQVYDLVDENQFRER--NRKELLRDDFVVDDDGKGYINKGIDEWDARYQEDDYSD 88
Query: 134 EKH---DKRKKNKNIQN--PNAKGD----IQKLLANMPVKKKKKEEVQLNNDDVLADLLS 184
+ R K + +++ PN D +QK A + V+KK K+ DD+L S
Sbjct: 89 FDDADAEIRVKAQRVKSTKPNVISDMINNVQKSRAAVSVQKKPKKINADEFDDILEQFDS 148
Query: 185 EVNTTIAPTLKLNT------KTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKK 238
E+ + + L T + + P P K L + IK ++ K
Sbjct: 149 EIVSAQPKSSTLITGGMNGFNSEKRSRPLGTPAVQNKKPKLDDSFDNIKEVSSMDSSPLK 208
Query: 239 EPSPLKDEIKSNDSVMEVEMN----------VAEQSKEEPVDDGLWEQMQIDDW-DNSQQ 287
S L+ + DSV E +N VA + + P+ + E IDD S
Sbjct: 209 FKSKLQQRAVNTDSVDEPGLNNVANNIQSSPVATKPRSSPLKN---EVFVIDDLPSTSNA 265
Query: 288 TQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEW 347
+ D ++ +++ + + KV T +AV S+SP V+ H
Sbjct: 266 SFDDNDSDDDIQFGRRTVKTVASDRKVTFT------TAVPNSSSP--HVIA---HGTPFD 314
Query: 348 EAIQTEPS-----TSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYL 402
+ +Q S Q+ S +DS+ TD+ F+MF+ D E T+ L
Sbjct: 315 QNMQIAGSGIAQVAVSGQLGSVYTEDSIVDGTDNS----FKMFWADFTE----LDSTLLL 366
Query: 403 FGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEF-DQIATQYKI 461
FGKV K + S V V + R++Y LPR E + +V+ E + +Y +
Sbjct: 367 FGKVKTK-HGKFISAMVQVAGLHRELYFLPR-------EGKTTMEVHEEIIPLLLDKYGL 418
Query: 462 LDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSS 516
+ +++ KKYAF LPG+P +EYL+V P +P+DLSGDTF HVFG ++
Sbjct: 419 DNIRAKPTIKKYAFELPGIPKEAEYLKVLLPYNTPKCKNMTIPADLSGDTFYHVFGGGTN 478
Query: 517 FLENLLLERKIKGPSWL 533
E+ +L++KI GPSWL
Sbjct: 479 IFESFVLQQKIMGPSWL 495
>gi|32329589|gb|AAP45772.1| DNA polymerase catalytic subunit alpha [Stylonychia lemnae]
Length = 1514
Score = 391 bits (1005), Expect = e-105, Method: Compositional matrix adjust.
Identities = 272/725 (37%), Positives = 403/725 (55%), Gaps = 69/725 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E
Sbjct: 801 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDLRRGFMGDEYEEN 860
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
+ G KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN CFTT+ R
Sbjct: 861 DTKGGGKKGGKRKKAKYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNXCFTTVNRR 920
Query: 670 MLQDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALM 711
++ D + L LP+ V+ +LP+ ++ LV+ R+ VK M
Sbjct: 921 PTKNYDGSELKNQFKSADNAEGDEVEDVDLPDKNVNIKDAVLPNVLRDLVQKRKAVKEKM 980
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
K L Q +IRQKA+KLTANSMYGCLGF +SRF A +AAL+T GRE LL TK
Sbjct: 981 KNEK-DQVKLQQLEIRQKAIKLTANSMYGCLGFSSSRFHASAIAALITKTGRETLLRTKD 1039
Query: 772 LVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYML 830
+ EN L + V+YGDTDS+MI+ N ++G ++K E N LYK LE++IDGV+K +L
Sbjct: 1040 IAENKLGFNVVYGDTDSIMINTGTNQLQQSLEMGKKLKVEVNCLYKCLEIEIDGVFKSLL 1099
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD- 889
LLKKKKYAAL + + ++ QE+KG+D+VRRDW L+ G +V+SQIL + D
Sbjct: 1100 LLKKKKYAALRYEGVGSNEVKVIQEMKGLDMVRRDWCPLSKSIGNYVLSQILSGKQREDV 1159
Query: 890 -YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
++L++ L +I E MK R LD F+ ITKQLT+A EY+D K PHV VA RL
Sbjct: 1160 VFNLNEYLSDIGEKMKSNRITLDQ-FI------ITKQLTRAISEYSDIKGQPHVAVAQRL 1212
Query: 949 NNTN-SKKLKQGDTISYIICEDGTSEAATQ-----RAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I A + +AY+ +E L + K+ +D+++Y++
Sbjct: 1213 KNQGKSEADLVNNFIPYVIGAQAFDTAKSNPQLSDKAYHPDELLSSKGKITLDIDWYITT 1272
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--------SQIKESIQQSEENILGVGE 1053
QI P +TRL+E I+G + +A+CLG+D Y+ +I + + IL
Sbjct: 1273 QILPPITRLIEHIDGINIEFVAQCLGVDPKKYKYHSEKKNTDEIGDDGGSIQNPILQTET 1332
Query: 1054 AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH 1113
+ +K++ + + C PSC + + P V L C K+P +
Sbjct: 1333 EKSLKHRSIAELKVKC--PSC--THNYDFPGIYQEGKDVSGLI-CTKCNAKIPE----KY 1383
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQ 1173
++N+++ + + + YY+G +C++P C +TR+ K + TC K K+ Y+E Q
Sbjct: 1384 VMNRVNLFLKQLLALYYQGKYECQEPSCKSMTRQLLYHNKC-VNLTC-KGKMVPEYSEHQ 1441
Query: 1174 LYQQLSFFHYICDITKAL---TKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDL 1230
L + + +I K L +K+D+ ++ D Y Y ++ V+ + S YN VDL
Sbjct: 1442 TNDTLRYLQGLFNIKKHLHENSKNDSLKVETDIPFYNEYNVLQTKVDXLMNRSKYNKVDL 1501
Query: 1231 KKLFS 1235
+F
Sbjct: 1502 GSIFG 1506
Score = 130 bits (328), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 134/559 (23%), Positives = 263/559 (47%), Gaps = 51/559 (9%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKR 100
+ GR ++ K+ A +L+ + G K ++ +E ++EE+ EY +R
Sbjct: 8 QSGREIKKIGQKSGVKNALAQLRAAREGGDKRTDQYQVEEAKRIFEEIDADEYERIQDQR 67
Query: 101 QEDDWIDDDGGDGYVEDGREIFD-DDIEDVPQKKEKHDKRKKNKNIQN---PNA---KGD 153
+ DD+I DD G GY + G EI++ DD E+V KK+K ++I N P + K
Sbjct: 68 KNDDFIVDDDGFGYRDHGGEIWERDDNEEVGGKKKKRKLDPNEQHITNFMMPASTIRKNK 127
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+N+ +K+K K + + D++ +LL E++ L+ + + ++ +P A
Sbjct: 128 GTGNSSNIQIKQKPKVTAE-QSMDIMNNLLQELDNKDVDELE-DVNASAVMAELNKPIAF 185
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
E L N + +E K E +K++ + E ++ + + N SK+ +D+
Sbjct: 186 NKNEELLN-KYGVTLESKQEIQVKRQLEQQQHE----QTIGQHQQNANVFSKKRKLDEIQ 240
Query: 274 WEQMQID--DWDNSQQTQDVLPEQAKVEL-----QIEAIESQSIEEKVDVTNVESVSSAV 326
Q++ + + + S+QT+ ++ + + Q+ +S + VD + + SSA
Sbjct: 241 QPQVKKEHQELNKSRQTETIIHQSSNTSYFDAKSQLSHDQSMEYQSAVDDSKMSESSSAQ 300
Query: 327 ELSTSPPPQVVEKKE-----HKCAEWEAIQTEPSTSEPQ---VHSRTADD----SLPLAT 374
+ + + P K + K EW I+ + + + + ++A D +LPL
Sbjct: 301 KNAMNEGPIAFSKNQTNMSASKNDEWAQIKHQNQQAHQEFKTMEQKSAMDIQEFALPLNQ 360
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS 434
D +++DA E+ +++FGK++ E N + SC + V + R+IY LP+
Sbjct: 361 DGS----LSFYWIDAHEE--NNGADLFIFGKIYQPEINQYVSCSMKVNGMQREIYALPKM 414
Query: 435 EHLKTKEPVS-------IAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSE 485
+ K + ++ + V E + I + I ++ + + +KYAF +P
Sbjct: 415 QKGKARGTLTREEENQLVRGVQLELEDIRKKRFQGITKWRCKPVTRKYAFEMPIQHGEHL 474
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-R 544
+L+++Y A LPS + G+TF +FG+ S LE +L+RKIKGP W+ +K +
Sbjct: 475 FLKIKYDATFIPLPSTVQGNTFECLFGSNQSMLELFILKRKIKGPCWMTIKNPKKVTDFK 534
Query: 545 ISWCKYEVQCNQMEKIRIT 563
+WC+ E++ + + +T
Sbjct: 535 KTWCRQEIEIDNPKNAEVT 553
>gi|444315684|ref|XP_004178499.1| hypothetical protein TBLA_0B01370 [Tetrapisispora blattae CBS 6284]
gi|387511539|emb|CCH58980.1| hypothetical protein TBLA_0B01370 [Tetrapisispora blattae CBS 6284]
Length = 1486
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 260/727 (35%), Positives = 400/727 (55%), Gaps = 62/727 (8%)
Query: 546 SWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN 605
S + +Q + K ++T + GN S+TL G R+ RNE++LLH F +Y+LPDK+ +
Sbjct: 779 SEVSFRIQLLSLTK-QLTTLAGNAWSQTLGGTRAGRNEYILLHEFSRNNYILPDKESNRQ 837
Query: 606 KKE-----GEETGEAN-KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEY 659
K + + G++N KKA Y GGLV EP+KG + +I++MDFNSLYPSIIQE+
Sbjct: 838 KAQRRQQIADTEGDSNLPPVSNKKAKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEF 897
Query: 660 NICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSD 719
NICFTT+ + +DI L E +P G+LP + LV+ RR+VK +M +D
Sbjct: 898 NICFTTVDRNL---NDIDELPE-VPASNKAQGVLPRLLATLVQRRREVKKVMAS---ETD 950
Query: 720 LL--MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN 777
L +Q DIRQ+ALKLTANSMYGCLG+ NSRF+A+PLA L T KGREIL+NT+ L E+L
Sbjct: 951 LHKKVQCDIRQQALKLTANSMYGCLGYNNSRFYAKPLAMLTTNKGREILMNTRQLAESLE 1010
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
V+YGDTDS+MI ++Y++ KIG K N+ Y+ LE+DID V+K +LL KKKY
Sbjct: 1011 LAVVYGDTDSVMIDTGCDNYNNAIKIGQDFKKLVNERYRLLEIDIDNVFKKLLLHAKKKY 1070
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
AAL++ G + E+KG+D+ RR++ L+ E V++ +L +D + L
Sbjct: 1071 AALNVIIDKQGNESTTLEVKGLDMKRREYCPLSKEVSIHVLNTVL-----SDKDSETALS 1125
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
I+E++++ R +++N + + +I +L+K P Y ++K +P VQVAL++ + +K
Sbjct: 1126 EIYEYLERTRNNVENNDIRIDKYKINTKLSKDPNSYPNKKTMPAVQVALKMRKA-GRVVK 1184
Query: 958 QGDTISYIICEDGTSEAA-----TQRAYNIEELKNNS-KLKIDVNYYLSQQIHPVVTRLL 1011
G I++II + + E+ RAY + E+ N S L D YYL +QI V RLL
Sbjct: 1185 AGSVITFIITKGNSDESEQDSHYADRAYALNEVMNKSNNLVPDPTYYLEKQIFSPVERLL 1244
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGE---AEEVKYQFCDKFEFT 1068
E IE D VR++ LGLD+ + + +S+ + + L E A+ +++ E T
Sbjct: 1245 ENIESFDIVRLSTSLGLDSKKFLRRPADSLSGNGIDTLQPLETTVADIERFKDSSALELT 1304
Query: 1069 CMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVK 1128
C P+C + + + + +C N E P + ++L + + +I
Sbjct: 1305 C--PNCANKFLFGGIIASNFYTMCYNGLQCKNCEHIFSPL----QITSQLERCIRSHISL 1358
Query: 1129 YYEGWLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFF---- 1181
YY GWL C+D C +TR+ + K L CT +YK Y++ +LY QL +F
Sbjct: 1359 YYAGWLVCDDKTCGTVTRQISVFGKRCLSDGCTGVMRYK----YSDKKLYNQLLYFDSLF 1414
Query: 1182 -------------HYICDITKALTKSDTPSIKFDSETYMGYCKMKQH-VERFLESSAYNI 1227
++ DI ++ + SIK SE + + V+++L A
Sbjct: 1415 DCEKNKNQLLKPLYHSGDIDYPISSLNESSIKVLSEQNRDLFETNRSVVQKYLSDCARRY 1474
Query: 1228 VDLKKLF 1234
VDL +F
Sbjct: 1475 VDLGSIF 1481
Score = 45.8 bits (107), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQE---DDWIDDDG 110
K K Q L++ K +H + D +Y+E+ E EY R KRQE DD++ DD
Sbjct: 7 KLEKLKKLQALRNAKNSQNQHSNDDINDNKIYDEIDEIEYRNR--KRQELLHDDFVIDDD 64
Query: 111 GDGYVEDGRE 120
G GYV+ G E
Sbjct: 65 GKGYVDRGIE 74
>gi|47118293|gb|AAT11258.1| DNA polymerase alpha [Uroleptus sp. WJC-2003]
Length = 1502
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 268/728 (36%), Positives = 398/728 (54%), Gaps = 69/728 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--------YGKNKKEGEET 612
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E EE
Sbjct: 789 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDFKRGMLGEEFEEN 848
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PVR 669
KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ P +
Sbjct: 849 DNKRKGPKRKKAQYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRRPTK 908
Query: 670 MLQDSDITTLCEY-------------LPEHQVDT--GILPSEIKKLVESRRQVKALMKQP 714
S+I + LP+ V+ +LP+ ++ LV+ RR VK MK
Sbjct: 909 NYDGSEIKNQFKIQDDDENEEEEQSDLPDKNVNLKDAVLPNVLRDLVQKRRAVKDKMKNE 968
Query: 715 NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE 774
L Q +IRQKA+KLTANSMYGCLGF +SRF A+ +AAL+T GRE LL TK + E
Sbjct: 969 K-DQIKLQQLEIRQKAIKLTANSMYGCLGFGSSRFHARAIAALITRTGRETLLRTKDIAE 1027
Query: 775 N-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
N L + V+YGDTDS+MI+ N ++G ++K E N YK LE++IDGV+K +LLLK
Sbjct: 1028 NKLGFNVVYGDTDSIMINTGTNILQQALEMGKRLKVEVNGFYKCLEIEIDGVFKSLLLLK 1087
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD--YS 891
KKKYAAL + + QE+KG+D+VRRDW L+ G +V+ QIL +S + +
Sbjct: 1088 KKKYAALKYEGYGSPDVKVIQEMKGLDMVRRDWCPLSKTVGNYVLGQILSGKSREEVVMN 1147
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
L++ L +I E MK R LD ITKQLT+A +Y D K PHVQ+A RL
Sbjct: 1148 LNEYLSDIGERMKSNRITLDQYI-------ITKQLTRAIADYNDIKGQPHVQIATRLKKQ 1200
Query: 952 N-SKKLKQGDTISYIICEDG-----TSEAATQRAYNIEELKNN-SKLKIDVNYYLSQQIH 1004
S+ G I Y+IC + T+ RAY+ +E+ ++ K+++D +Y++QQI
Sbjct: 1201 GKSEADLVGGFIPYVICTETFEPSKTNPGLADRAYHPDEVASSKGKVQLDNEWYITQQIL 1260
Query: 1005 PVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKE---------SIQQSEENILGVGEAE 1055
P +TRL+E I+G D +A+CLG+D Y+ ++ + Q + IL +
Sbjct: 1261 PPITRLIEHIDGIDVEFVAQCLGVDPKKYKYHSEKKRDDGADGNDMGQIQNPILQTETEK 1320
Query: 1056 EVKYQFCDKFEFTCMNPSCKQVNT---VEAPTRLSTHGVVFVLDECINPECKVPPYTYLP 1112
+K + + + C P C++ + + + G+ CI K+P
Sbjct: 1321 SLKNRSIAELKVKC--PYCQEQYSFPGIYQEIKKEASGM-----NCIKCNKKLPQ----Q 1369
Query: 1113 HLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTEL 1172
+++N+++ + + +V YY G C + C++ R L + TC K K+ YTE
Sbjct: 1370 YVMNRINLFLKQLLVLYYSGNFNCSETSCNNKDCRQLLVNNKCIIPTC-KGKMIAEYTES 1428
Query: 1173 QLYQQLSFFHYICDITKALTKSDTPSIK-FDSETYMGYCKMKQHVERFLESSAYNIVDLK 1231
Q L + + ++ K + + + K D + + ++Q V+ + S YN VDL
Sbjct: 1429 QTNDTLRYLQGLFNLKKYIHEQKKTAFKESDIPNWENFQALQQKVDTVINRSKYNKVDLS 1488
Query: 1232 KLFSCEEK 1239
+F+ K
Sbjct: 1489 SIFNFMRK 1496
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 134/555 (24%), Positives = 246/555 (44%), Gaps = 69/555 (12%)
Query: 50 QKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKRQEDDWID 107
+K K + A +L+ + G K ++ DE ++ ++ ++EY KR+ DD+I
Sbjct: 15 KKAGKRDTSDAISQLRAAREGGQKRTDQYQVDEAKKIFADIDDEEYERLQDKRKNDDFIV 74
Query: 108 DDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKK-- 165
DD G GY + G EI++ V KE+ K+K+ K N + + L+ +P KK
Sbjct: 75 DDEGFGYRDFGGEIWE-----VGDTKEEGAKKKRRKLDPNEQSITNFMMPLSTIPKKKNQ 129
Query: 166 ----------KKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTA 215
K EE Q D++ DLL E + A L+ +I + K
Sbjct: 130 SINNSIQQKPKISEEQQ---KDIMNDLLQEFDQKDADELE------DINVAK-------- 172
Query: 216 KEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWE 275
+A+ ++PI K+ E+ I K L+ +++ M + + + ++ + +
Sbjct: 173 --VMADLNQPIAFSKE-EELINKYNFTLEARQIADEKRMGEQQQIMSGTMQQNTNP-FSK 228
Query: 276 QMQIDDWDNS-----QQTQDVLPEQAKV--------ELQIEAIESQSIEEKVDVTNVESV 322
+ + DD N+ +Q Q P+ + + QI++ + QS + + + +
Sbjct: 229 KRKFDDISNTTSAEKKQFQKNHPQSSNTSYFDAKSNQSQIQSDDYQSAFDDSKMLESKQI 288
Query: 323 SSAVELSTSP--PPQVVEKKEHKCAEWEAIQTEP---STSEPQVHSRTADDSLPLATDHE 377
V+ + P PP K +W ++ + + + S A ++ +
Sbjct: 289 EQQVQQTVKPQIPPTSNSTTPLKNDDWNQLKQQNFQMNNEFKHIDSSAAINAQDYPVPYN 348
Query: 378 NKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP----- 432
+++DA E+ +Y+FGK+F E SC + V + R+IY LP
Sbjct: 349 ADGTLSFYWIDAHEE--NNGADLYVFGKIFQPEVKQFVSCALKVNGMQREIYALPKQTGK 406
Query: 433 -RSEHLKTKEPVSIAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
R K +E + V E D I + I ++ + + +KYAF +P +L++
Sbjct: 407 ARGTLTKEEESKQVRAVQLELDDIRKKRFSGITKWRCKPVTRKYAFEMPIQHGEHLFLKI 466
Query: 490 RYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWC 548
+Y + P LP++L+G +F +F T S LE L+L+RKIKGP W+ A+K + +WC
Sbjct: 467 KYDSTMPPLPTNLTGQSFECLFNTNQSMLELLILKRKIKGPCWMTIKNAQKVVDFKKTWC 526
Query: 549 KYEVQCNQMEKIRIT 563
+ E+ + + I IT
Sbjct: 527 RQEISIDNPKNIEIT 541
>gi|151944432|gb|EDN62710.1| DNA polymerase I alpha subunit p180 [Saccharomyces cerevisiae YJM789]
Length = 1468
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 246/660 (37%), Positives = 378/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 766 YRIQLLSLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 824
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 825 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 884
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 885 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKTET-DPHKRVQCDIR 939
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 940 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 999
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 1000 VMIDTGCDNYADAIKIGLGFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 1059
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 1060 GNETTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 1114
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1115 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1173
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ LK D YYL +QI V RLLE I+
Sbjct: 1174 KQDEIDNAGDTPALSVAERAHALNEVMIKSNN-LKPDPQYYLEKQIFAPVERLLERIDSF 1232
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1233 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1288
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1289 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1344
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1345 WLQCDDSTCGIVTRQVSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1400
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 157/612 (25%), Positives = 260/612 (42%), Gaps = 110/612 (17%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEF--TADENVYEEVSEKEYTERVLKRQE--------- 102
K+ K +KL+ + YE + + +Y+E+ EKEY R KRQE
Sbjct: 4 KSEKLEKLRKLQAARNGASIDDYEGDESDGDRIYDEIDEKEYRAR--KRQELLHDDFVVD 61
Query: 103 ---DDWIDDDGGDGYVEDGREIFDDDI-EDVPQKKEKHDKRKKNKNIQNPNAKGDIQK-- 156
++D G ED RE+ + ED K KRKKN + + D+ +
Sbjct: 62 DDGVGYVDR----GVEEDWREVDNSSSDEDTGNLASKDSKRKKNIKREKDHQITDMLRTQ 117
Query: 157 -----LLANMPVKKKKKEEVQLNN-DDVLADLLS-EV---NTTIAPTLKLN---TKTNEI 203
LLA+ KK +K+ + ++N DD+L + S EV N + L+ N + T+E
Sbjct: 118 HSKSTLLAH--AKKSQKKSIPIDNFDDILGEFESGEVEKPNILLPSKLRENLNSSPTSEF 175
Query: 204 VIPKEEPPAPTAKEYLANFSKPIKVE--KKIEKPIKKEPSPLKDEIKS-------NDSVM 254
+ + A SK +K++ +K ++ E SPLK + + D +
Sbjct: 176 KSSIKRVNGNDESSHDAGISKKVKIDPDSSTDKYLEIESSPLKLQSRKLRYANDVQDLLD 235
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
+VE + +K + V +Q N Q + E+ + + I + V
Sbjct: 236 DVENSPVVATKRQNV-------LQDTLLANPPSAQSLADEEDDEDSDEDIILKRRTMRSV 288
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTS------EPQVHSRTADD 368
T ++ S STSP T P T P S+++ D
Sbjct: 289 TTTRRVNIDSRSNPSTSP-----------------FVTAPGTPIGIKGLTPSKSSQSSTD 331
Query: 369 SLPLATDHENKKV-------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIV 421
LA + + + V F+MF+LD E T+ LFGKV +K+ N S+ V +
Sbjct: 332 VATLAVNVKKEDVVDPETDTFQMFWLDYCE----VNNTLILFGKVKLKDGNCVSAM-VQI 386
Query: 422 QNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
+ R+++ LPR + K P I + + +Y + + +++ + KY+F LP +P
Sbjct: 387 NGLCRELFFLPR----EGKTPTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIP 440
Query: 482 DLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP 536
S+YL+V + P +PSDLS DTF HVFG S+ E+ +++ +I GP WL+
Sbjct: 441 SESDYLKVLLPYQTPKSSRDTIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIK 500
Query: 537 EAEKFPSR-ISWCKYEVQCNQMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LL 586
A+ R S C EV ++ + I T C ++ +TLM + + E +
Sbjct: 501 GADFNSIRNASHCAVEVSVDKPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSIT 560
Query: 587 LHAFHEKSYVLP 598
L A+ S P
Sbjct: 561 LSAYRNISLDSP 572
>gi|320163763|gb|EFW40662.1| DNA polymerase alpha subunit I [Capsaspora owczarzaki ATCC 30864]
Length = 1656
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 262/665 (39%), Positives = 357/665 (53%), Gaps = 135/665 (20%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHE-------KSYVLPDKQYGKNKKEGEET- 612
++TN+ GN+ SRTL+GGR+ERNEF LLH F + ++ PDK Y ++
Sbjct: 914 QLTNIAGNLWSRTLLGGRAERNEFYLLHEFSRPTVWEANRKFIPPDKIYASQVRKAAAAA 973
Query: 613 -----GEANKGKG-----------------------------------RKKAAYSGGLVL 632
G+ N+GK RKKAAY+GGLVL
Sbjct: 974 AAAAAGKGNRGKAAAAAADEGMDEDDQGPSDPASTAAGGGAAAGAFKKRKKAAYAGGLVL 1033
Query: 633 EPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVR---MLQDSD-----ITTLC 680
EPKKGFYD++I+L+DFNSLYPSII EYNICFTT+ PV L+D + IT
Sbjct: 1034 EPKKGFYDRYILLLDFNSLYPSIIMEYNICFTTVDKPQPVSDPTGLEDGNGQPLMITPPA 1093
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
E LP G+LP + +LV+ R K M + Q+DIRQ+ALKLTANSMYG
Sbjct: 1094 E-LPAKTRKDGLLPRVLSRLVQQRALAKKEMAN---HPEQKQQWDIRQRALKLTANSMYG 1149
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLV-ENLNYEVIYGDTDSLMISCNVNDYDS 799
CLGF NSRF+A+ LA L+T +GR+IL +T LV + LN EVIYGDTDS+MI+
Sbjct: 1150 CLGFTNSRFYAKHLAELITGRGRDILQSTVDLVQQQLNLEVIYGDTDSIMINTQSIHLPD 1209
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS------KLSNGKMICS 853
V ++G ++K + N YKQL +++DG++K MLLLKKKKYAALS+ ++ NG S
Sbjct: 1210 VLEVGQRVKKQVNDRYKQLVIEMDGIFKSMLLLKKKKYAALSVHLKDGAVEMVNGAPRVS 1269
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQIL--------DEQSYTDYSLDDRLQNIHEHMKK 905
+E KG+D+VRRDW LA +AG FV++QIL D+ + S D ++ I ++ +
Sbjct: 1270 RETKGLDIVRRDWCDLAHDAGNFVLNQILSDNNAASIDDAAEGVLSKDALVERIRTYLLQ 1329
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
+ D+ G L I K LTK PEEY D+K+ PHVQVALRL K ++ GDT+ Y+
Sbjct: 1330 LAADVRTGKTLLNKFVINKGLTKNPEEYADKKSQPHVQVALRLKE-QGKAVRAGDTVPYV 1388
Query: 966 ICEDGTSEAATQRAYNIEE-LKNNSK---------------------------------- 990
IC RAY+ +E L+ S+
Sbjct: 1389 ICSGSQELGPADRAYHPDEILRAFSRAIAAQAQLPSDAPLPQLDIQTATSAVPASAIACE 1448
Query: 991 LKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKES-IQQSEENIL 1049
L +DV +YL Q+HPV++RL +PIEGT A IAE LGLDT+ Y + + + N
Sbjct: 1449 LNVDVEWYLKYQVHPVISRLCDPIEGTSAALIAEYLGLDTTPYTHRTSSNGMACPRPNCT 1508
Query: 1050 GVGEAEEVKYQ-------FCDKF---EFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECI 1099
G A V + F D++ C + +C+Q T +LS +G +C+
Sbjct: 1509 GEFRAVSVMNRLTIMMRGFIDEYYQGWMKCDDAACQQQRT----RQLSVNG-----RKCL 1559
Query: 1100 NPECK 1104
NP CK
Sbjct: 1560 NPGCK 1564
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 126/209 (60%), Gaps = 10/209 (4%)
Query: 359 PQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCC 418
P V S ++ +LPL TD + + ++LDA+ED+ PG +YL GKV+ + + H SCC
Sbjct: 463 PTVSSSSS--ALPLKTDEAGVQYVQFYWLDAYEDMTISPGLIYLIGKVWSETDKRHVSCC 520
Query: 419 VIVQNIDRKIYLLPRSEH------LKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK 472
V+V N +R I++LPR EH + T + V+I V E D + +Y+I +++S+ +++
Sbjct: 521 VVVHNNERNIFILPR-EHALDANGISTAKEVTIEDVEDELDNVRAKYRIEEWRSKPVQRL 579
Query: 473 YAFNLPGVPDLSEYLEVRYS-AKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPS 531
YAF LPGVP + Y++V+YS A +D SG T+SH+FGT +S LE L++R + GP
Sbjct: 580 YAFGLPGVPAYATYIKVKYSAALPALAAADQSGKTYSHIFGTTTSCLERFLVKRALMGPC 639
Query: 532 WLEFPEAEKFPSRISWCKYEVQCNQMEKI 560
WL+ P + +WC E C+ + I
Sbjct: 640 WLKVPCRPNNGAPETWCALEAICDNPKSI 668
>gi|349580835|dbj|GAA25994.1| K7_Pol1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1468
Score = 388 bits (997), Expect = e-104, Method: Compositional matrix adjust.
Identities = 246/660 (37%), Positives = 378/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 766 YRIQLLSLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 824
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 825 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 884
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 885 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKTET-DPHKRVQCDIR 939
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 940 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 999
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 1000 VMIDTGCDNYADAIKIGLGFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 1059
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 1060 GNETTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 1114
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1115 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1173
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ LK D YYL +QI V RLLE I+
Sbjct: 1174 KQDEIDNAGDTPALSVAERAHALNEVMIKSNN-LKPDPQYYLEKQIFAPVERLLERIDSF 1232
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1233 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1288
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1289 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1344
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1345 WLQCDDSTCGIVTRQVSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1400
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 157/612 (25%), Positives = 261/612 (42%), Gaps = 110/612 (17%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEF--TADENVYEEVSEKEYTERVLKRQE--------- 102
K+ K +KL+ + YE + + +Y+E+ EKEY R KRQE
Sbjct: 4 KSEKLEKLRKLQAARNGASIDNYEGDESDGDRIYDEIDEKEYRAR--KRQELLHDDFVVD 61
Query: 103 ---DDWIDDDGGDGYVEDGREIFDDDI-EDVPQKKEKHDKRKKNKNIQNPNAKGDIQK-- 156
++D G ED RE+ + ED K KRKKN + + D+ +
Sbjct: 62 DDGVGYVDR----GVEEDWREVDNSSSDEDTGNLASKDSKRKKNIKREKDHQITDMLRTQ 117
Query: 157 -----LLANMPVKKKKKEEVQLNN-DDVLADLLS-EV---NTTIAPTLKLN---TKTNEI 203
LLA+ KK +K+ + ++N DD+L + S EV N + L+ N + T+E
Sbjct: 118 HSKSTLLAH--AKKSQKKSIPVDNFDDILGEFESGEVEKPNILLPSKLRENLNSSPTSEF 175
Query: 204 VIPKEEPPAPTAKEYLANFSKPIKVE--KKIEKPIKKEPSPLKDEIKS-------NDSVM 254
+ + A SK +K++ +K ++ E SPLK + + D +
Sbjct: 176 KSSIKRVNGNDESSHDAGISKKVKIDPDSSTDKYLEIESSPLKLQSRKLRYANDVQDLLD 235
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
+VE + +K + V +Q N Q + E+ + + I + V
Sbjct: 236 DVENSPVVATKRQNV-------LQDTLLANPPSAQSLADEEDDEDSDEDIILKRRTMRSV 288
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTS------EPQVHSRTADD 368
T ++ S STSP T P T P S+++ D
Sbjct: 289 TTTRRVNIDSRSNPSTSP-----------------FVTAPGTPIGIKGLTPSKSSQSSTD 331
Query: 369 SLPLATDHENKKV-------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIV 421
LA + + + V F+MF+LD E T+ LFGKV +K++N S+ V +
Sbjct: 332 VATLAVNVKKEDVVDPETDTFQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQI 386
Query: 422 QNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
+ R+++ LPR + K P I + + +Y + + +++ + KY+F LP +P
Sbjct: 387 NGLCRELFFLPR----QGKTPTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIP 440
Query: 482 DLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP 536
S+YL+V + P +PSDLS DTF HVFG S+ E+ +++ +I GP WL+
Sbjct: 441 SESDYLKVLLPYQTPKSSRDTIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIK 500
Query: 537 EAEKFPSR-ISWCKYEVQCNQMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LL 586
A+ R S C EV ++ + I T C ++ +TLM + + E +
Sbjct: 501 GADFNSIRNASHCAVEVSVDKPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSIT 560
Query: 587 LHAFHEKSYVLP 598
L A+ S P
Sbjct: 561 LSAYRNISLDSP 572
>gi|367015308|ref|XP_003682153.1| hypothetical protein TDEL_0F01310 [Torulaspora delbrueckii]
gi|359749815|emb|CCE92942.1| hypothetical protein TDEL_0F01310 [Torulaspora delbrueckii]
Length = 1448
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 253/657 (38%), Positives = 369/657 (56%), Gaps = 53/657 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN S+TL G R+ RNE++LLH F Y++PDK+ K + + E G
Sbjct: 748 QLTNLAGNAWSQTLGGTRAGRNEYILLHEFSRNGYIVPDKETNKTRAQRARKQEEALVDG 807
Query: 621 R--------KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+ R L+
Sbjct: 808 EPPDAIPSSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD-RNLE 866
Query: 673 DSDITTLCEYLPEHQVD---TGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQK 729
D+D LP VD G+LP + LV+ RR+VK +M + +Q DIRQ+
Sbjct: 867 DAD------ELPNAPVDKKEQGVLPRLLANLVQRRREVKKIMASES-DPHKRVQCDIRQQ 919
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLM 789
ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E+++ V+YGDTDS+M
Sbjct: 920 ALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMSLLVVYGDTDSVM 979
Query: 790 ISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGK 849
I + Y +IGN K N+ Y+ LE+DID V+K +LL KKKYAAL+ S NGK
Sbjct: 980 IDSGCDSYTGALEIGNNFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAALNASLDKNGK 1039
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
E+KG+D+ RR++ L+ + V++ IL +Q + LQ +E+++ IR
Sbjct: 1040 EHTVLEVKGLDMKRREYCPLSKDVSVHVLNTILSDQDP-----ETALQRTYEYLEGIRNQ 1094
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-- 967
++ + + +I +L+K P Y K +P VQVALR+ N + +K G I+++I
Sbjct: 1095 VEQNEIRMDRYKINTKLSKDPGAYPGGKNMPAVQVALRM-RKNGRVVKAGTVITFVITKQ 1153
Query: 968 ---EDGTSEAAT-----QRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
E G EA RA N +K N LK D YYL +QI V RLLE IE D
Sbjct: 1154 EEKETGQKEAMLPIAERARALNEVMVKGNG-LKPDPEYYLEKQIFGPVERLLERIESFDI 1212
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNT 1079
VR++E LGLD+ Y ++ +E N G+ + ++ D F + + ++N
Sbjct: 1213 VRLSEALGLDSRRYMNRGG----SNETNGSGINGLQPLESTIPDTERFK--DAANLKLNC 1266
Query: 1080 VEAPTRLSTHGVV---FVLDECINPECKVPPYTYLPHLIN-KLSQDMNKYIVKYYEGWLK 1135
G+V + +CK + + P IN +L + + +I YY GWL+
Sbjct: 1267 PNCSATFDFGGIVASNYYSMSYNGLQCKKCEHLFAPLQINSQLERSIRSHISLYYAGWLQ 1326
Query: 1136 CEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
C+DP C ++TR+ + K L CT +Y+ Y++ +LY QL +F + + K
Sbjct: 1327 CDDPTCGNVTRQISVFGKRCLNDGCTGVMRYR----YSDKKLYNQLLYFDSLFNCEK 1379
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 128/534 (23%), Positives = 236/534 (44%), Gaps = 62/534 (11%)
Query: 81 DENVYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKH- 136
D+ +Y+E+ E EY R KRQE DD++ DD G GYV+ G E +D ED +++
Sbjct: 29 DDRLYDEIDEHEYRSR--KRQELLRDDFVVDDDGLGYVDRGVE---EDQEDYSEEELDEQ 83
Query: 137 ------DKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNN------DDVLADLLS 184
+K+K K ++ N+ G++ ++ N + + +++ N DD+L + +
Sbjct: 84 GEESAIEKKKSTKKQKDKNSIGNLLRVQQNKEILSGRAAQLKTKNVAIDEFDDILGEFDN 143
Query: 185 EVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLK 244
+V + P L++ ++ P +P P+++ + + I + I+ + SPLK
Sbjct: 144 DVVVKVKPNLRMKLPSSP-TRPSNKP-NPSSRIGHSASKRRIDNDSSYNNDIQLDSSPLK 201
Query: 245 DEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEA 304
+ M M E S P+ +++ +++ + ++
Sbjct: 202 SRKVDDQDYMNELMKNLENS---PMSKRSVSSLRVT---QAEKIVEDDDSDDEIIFGRRT 255
Query: 305 IESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSR 364
+ S + ++++ + + S+ ++ P + K + + + + + P EP R
Sbjct: 256 LRSVAATRQININSSSNAPSSPFVTAPSTPAISRKADLR----KGLNSSP---EPLTIGR 308
Query: 365 TADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNI 424
+ + F+MF+LD E ++ LFGK+ +N S V ++ +
Sbjct: 309 ARYEKDQVVDPSSGN--FKMFWLDYCE----VDNSLVLFGKIKTNDNKLVSGM-VQIKGL 361
Query: 425 DRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLS 484
R++Y LPR + K P + + + +Y I +S+ KY F LP VP S
Sbjct: 362 CRELYFLPR----EGKTPQDVHEEIIPL--LLGKYGIDTLRSKPERMKYCFELPEVPRES 415
Query: 485 EYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
+YL+V P +PSDLS DTF HVFG ++ E +++KI GP WLEF +
Sbjct: 416 DYLKVLLPFDTPKSKYDTIPSDLSSDTFHHVFGGNANIFETFAIQKKIMGPCWLEFKNGD 475
Query: 540 -KFPSRISWCKYEVQCNQMEKI---RITNVCG----NVLSRTLMGGRSERNEFL 585
S C EV N + I I NV G ++ +T+M + + E +
Sbjct: 476 FNALQNASNCALEVVVNNPQDILPLDIKNVPGLDAISLAVQTVMNQKDNKQEIV 529
>gi|32329599|gb|AAP45777.1| DNA polymerase catalytic subunit alpha [Stylonychia lemnae]
Length = 1514
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 270/725 (37%), Positives = 402/725 (55%), Gaps = 69/725 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E
Sbjct: 801 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDLRRGFMGDEYEEN 860
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
+ G KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R
Sbjct: 861 DTKGGGKKGGKRKKAKYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 920
Query: 670 MLQDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALM 711
++ D + L LP+ V+ +LP+ ++ LV+ R+ VK M
Sbjct: 921 PTKNYDGSELKNQFKSADNAEGDEVEDVDLPDKNVNIKDAVLPNVLRDLVQKRKAVKEKM 980
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
K L Q +IRQKA+KLTANSMYGCLGF +SRF A +AAL+T GRE LL TK
Sbjct: 981 KNEK-DQVKLQQLEIRQKAIKLTANSMYGCLGFSSSRFHASAIAALITKTGRETLLRTKD 1039
Query: 772 LVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYML 830
+ EN L + V+YGDTDS+MI+ N ++G ++K E N LYK LE++IDGV+K +L
Sbjct: 1040 IAENKLGFNVVYGDTDSIMINTGTNQLQQSLEMGKKLKVEVNCLYKCLEIEIDGVFKSLL 1099
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD- 889
LLKKKKYAAL + + ++ QE+KG+D+VRRDW L+ G +V+SQIL + D
Sbjct: 1100 LLKKKKYAALRYEGVGSNEVKVIQEMKGLDMVRRDWCPLSKSIGNYVLSQILSGKQREDV 1159
Query: 890 -YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
++L++ L +I E MK R LD F+ ITK T+A EY+D K PHV VA RL
Sbjct: 1160 VFNLNEYLSDIGEKMKSNRITLDQ-FI------ITKXXTRAISEYSDIKGQPHVXVAQRL 1212
Query: 949 NNTN-SKKLKQGDTISYIICEDGTSEAATQ-----RAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I A + +AY+ +E L + K+ +D+++Y++
Sbjct: 1213 KNQGKSEADLVNNFIPYVIGAXAFDTAKSNPQLSDKAYHPDELLSSKGKITLDIDWYITT 1272
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--------SQIKESIQQSEENILGVGE 1053
QI P +TRL+E I+G + +A+CLG+D Y+ +I + + IL
Sbjct: 1273 QILPPITRLIEHIDGINIEFVAQCLGVDPKKYKYHSEKKNTDEIGDDGGSIQNPILQTET 1332
Query: 1054 AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH 1113
+ +K++ + + C PSC + + P V L C K+P +
Sbjct: 1333 EKSLKHRSIAELKVKC--PSC--THNYDFPGIYQEGKDVSGLI-CTKCNAKIPE----KY 1383
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQ 1173
++N+++ + + + YY+G +C++P C +TR+ K + TC K K+ Y+E Q
Sbjct: 1384 VMNRVNLFLKQLLALYYQGKYECQEPSCKSMTRQLLYHNKC-VNLTC-KGKMVPEYSEHQ 1441
Query: 1174 LYQQLSFFHYICDITKAL---TKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDL 1230
L + + +I K L +K+D+ ++ D Y Y ++ V+ + S YN VDL
Sbjct: 1442 TNDTLRYLQGLFNIKKHLHENSKNDSLKVETDIPFYNEYNVLQTKVDELMNRSKYNKVDL 1501
Query: 1231 KKLFS 1235
+F
Sbjct: 1502 GSIFG 1506
Score = 130 bits (327), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 136/561 (24%), Positives = 262/561 (46%), Gaps = 55/561 (9%)
Query: 43 EGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKR 100
+ GR ++ K+ A +L+ + G K ++ +E ++EE+ EY +R
Sbjct: 8 QSGREIKKIGQKSGVKNALAQLRAAREGGDKRTDQYQVEEAKRIFEEIDADEYERIQDQR 67
Query: 101 QEDDWIDDDGGDGYVEDGREIFD-DDIEDVPQKKEKHDKRKKNKNIQN---PNA---KGD 153
+ DD+I DD G GY + G EI++ DD E+V KK+K ++I N P + K
Sbjct: 68 KNDDFIVDDDGFGYRDHGGEIWERDDNEEVGGKKKKRKLDPNEQHITNFMMPASTIRKNK 127
Query: 154 IQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAP 213
+N+ +K+K K + + D++ +LL E++ L+ + + ++ +P A
Sbjct: 128 GTGNSSNIQIKQKPKVTAE-QSMDIMNNLLQELDNKDVDELE-DVNASAVMAELNKPIAF 185
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
E L N + +E K E +K++ + E ++ + + N SK+ +D+
Sbjct: 186 NKNEELLN-KYGVTLESKQEIQVKRQLEQQQHE----QTIGQHQQNANVFSKKRKLDE-- 238
Query: 274 WEQMQI----DDWDNSQQTQDVLPEQAKVEL-----QIEAIESQSIEEKVDVTNVESVSS 324
+Q QI + + S+QT ++ + + Q+ +S + VD + + SS
Sbjct: 239 IQQPQIKKEHQELNKSRQTXTIIHQSSNTSYFDAKSQLSHDQSMEYQSAVDDSKMSESSS 298
Query: 325 AVELSTSPPPQVVEKKE-----HKCAEWEAIQTEPSTSEPQ---VHSRTADD----SLPL 372
A + + + P K + K EW I+ + + + + ++A D +LPL
Sbjct: 299 AQKNAMNEGPIAFSKNQTNMSASKNDEWAQIKHQNQQAHQEFKTMEQKSAMDIQEFALPL 358
Query: 373 ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
D +++DA E+ +++FGK++ E N + SC + V + R+IY LP
Sbjct: 359 NQDGS----LSFYWIDAHEE--NNGADLFIFGKIYQPEINQYVSCSMKVNGMQREIYALP 412
Query: 433 RSEHLKTKEPVS-------IAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDL 483
+ + K + ++ + V E + I + I ++ + + +KYAF +P
Sbjct: 413 KMQKGKARGTLTREEENQLVRGVQLELEDIRKKRFQGITKWRCKPVTRKYAFEMPIQHGE 472
Query: 484 SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS 543
+L+++Y A LPS + G+TF +FG+ S LE +L+RKIKGP W+ +K
Sbjct: 473 HLFLKIKYDATFIPLPSTVQGNTFECLFGSNQSMLELFILKRKIKGPCWMTIKNPKKVTD 532
Query: 544 -RISWCKYEVQCNQMEKIRIT 563
+ +WC+ E++ + + +T
Sbjct: 533 FKKTWCRQEIEIDNPKNAEVT 553
>gi|367002710|ref|XP_003686089.1| hypothetical protein TPHA_0F01710 [Tetrapisispora phaffii CBS 4417]
gi|357524389|emb|CCE63655.1| hypothetical protein TPHA_0F01710 [Tetrapisispora phaffii CBS 4417]
Length = 1460
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 255/678 (37%), Positives = 387/678 (57%), Gaps = 51/678 (7%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK-- 607
+ +Q + K ++TN+ GN S+TL G R+ RNE++LLH F Y++PDK+ K++
Sbjct: 752 FRIQLLSLTK-QLTNLAGNAWSQTLGGTRAGRNEYILLHEFVRNGYIVPDKESNKSRARK 810
Query: 608 --EGEETGEANKGKG----RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
E +ET N KKA Y GGLV EP+KG + +I++MDFNSLYPSIIQE+NI
Sbjct: 811 NVEHQETEGNNSSMAPAVSSKKAKYQGGLVFEPEKGLHKNYILVMDFNSLYPSIIQEFNI 870
Query: 662 CFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALM---KQPNLSS 718
CFTT+ + +DI + E +P + + G+LP ++ LV+ RR+VK LM P++ +
Sbjct: 871 CFTTVDRNL---NDIEEIPE-VPSSEKEQGVLPRLLQNLVQRRREVKKLMINESDPHIRA 926
Query: 719 DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNY 778
Q DIRQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N
Sbjct: 927 ----QCDIRQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTGKGREILMNTRQLAESMNL 982
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
+V+YGDTDS+MI Y +G K N+ YK LE+DID V+K +LL KKKYA
Sbjct: 983 KVVYGDTDSVMIDTGSELYGQAIAVGLNFKKLVNERYKLLEIDIDNVFKKLLLHSKKKYA 1042
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
AL+++ N + S E+KG+D+ RR++ L+ E +++ IL +D + LQ
Sbjct: 1043 ALNVTIDKNKQEQTSLEVKGLDMRRREYCPLSKEVSTNILNLIL-----SDKDSETALQE 1097
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
I+++++ I++ ++N + + +I +L+K P Y K++P VQVAL + + +K
Sbjct: 1098 IYDYLEDIKSKVENNEIRVDKYKINTKLSKDPSAYPGGKSMPAVQVALHMRKA-GRVVKA 1156
Query: 959 GDTISYIIC---EDGTSEAAT----QRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTR 1009
G I+++I ED A+T +RA+++ E +K N+ L D NYYL +QI V R
Sbjct: 1157 GSVITFVITKEKEDENKSASTTSPAERAFSLNEVMVKTNNLLP-DPNYYLEKQIFAPVER 1215
Query: 1010 LLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCD--KFE- 1066
LLE IE D VR++ LGLD+ Y ++ E + G+ + ++ D +F+
Sbjct: 1216 LLENIESFDIVRLSSALGLDSRKYLQRVNEYGNGAN----GIDNLQPLETTISDVERFKD 1271
Query: 1067 --FTCMN-PSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMN 1123
F +N PSC + + V F +C +C+ T ++L + +
Sbjct: 1272 TAFVILNCPSCDNEFPFGGIVASNYYTVCFNGIQC--KKCEHIFSTI--QFTSQLERCIR 1327
Query: 1124 KYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHY 1183
+I YY GWL C+D C ++TR+ + K L C +R YT+ QLY QL +F
Sbjct: 1328 SHISLYYAGWLHCDDRTCGNVTRQISVFGKRCLMDGCTGVMRYR-YTDKQLYNQLLYFDS 1386
Query: 1184 ICDITKALTKSDTPSIKF 1201
+ D K + P +F
Sbjct: 1387 LFDCKKIKNRELKPLYQF 1404
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 248/557 (44%), Gaps = 70/557 (12%)
Query: 55 TNKFAAFQKLKDLKG--QGVKHKYEFTADENVYEEVSEKEYTERVLKRQE---DDWIDDD 109
T+ + +KLK L+ G + + D+ +Y+E+ E EY R KRQE DD++ DD
Sbjct: 2 TSNQSRLEKLKKLQAARNGGQASDDVEYDDVLYDELDENEYRSR--KRQELLQDDFVVDD 59
Query: 110 GGDGYVE-------DGREIFDDDIEDVPQKKEKHDKR----KKNKNIQNPNAKGDIQKLL 158
G GYV+ D R+ + D ED+ ++ K+ K K+I+N + + +
Sbjct: 60 DGLGYVDRGVGDDWDNRDEYYTDEEDIVGNQKNSKKKPLTEKDTKSIENIIRAQNSKISI 119
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEE--PPAPTAK 216
+N K KK V D+L E N + + T ++ IP P +PT
Sbjct: 120 SNQLNKPKKNFGVA-----DFDDILDEFNDSNEEKMSFRTAP-KVNIPTHSKLPSSPTIS 173
Query: 217 EYLANFSKPIKVEK--KIEKPIKKEPSPLKDE--IKSNDSVMEVEMNVAEQSKEEPVDDG 272
+K ++V++ K K +K E + + + ++ + S ++ + N+ SKEE
Sbjct: 174 NKRI-MTKDVEVQEDGKQSKKLKTEEAFIHNSKILQISSSPLKSKSNMINTSKEE----- 227
Query: 273 LWEQMQIDDWDNSQQTQDVLPE--------QAKVELQIEAIESQSIEEKVDVTNVESVSS 324
+ + + +++ ++ + ++ + S K+++++ ++ S
Sbjct: 228 --SETPVPSSPTATKSEKIIQKLSEDDSDSDEEIAFGRRTMRSAKSTRKINLSSKTNLGS 285
Query: 325 AVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRM 384
+ ++ P V + + Q+ P T E V + + + D E F+M
Sbjct: 286 SPFVTAPGTPLVSKAPDTPSKTGIDTQSIPDT-ESLVFKKYDKEQI---IDPETNG-FKM 340
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVS 444
F+LD F ++ + + +FG V + S S V + + R+++ LPR E V
Sbjct: 341 FWLD-FSEVDSK---LIIFGLVRALDG-SLLSAMVQINGLARELFFLPR-------EGVE 388
Query: 445 IAQVYSEFDQIATQ-YKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP-----AL 498
+V E + + Y + +S+ E KYAF +PG+P ++ YL+V P +
Sbjct: 389 PEEVQEEIVPLLLEKYGLDKIRSKPQEMKYAFEIPGIPHVTNYLKVLLPFDTPKSKRDII 448
Query: 499 PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCNQM 557
PSDL+ + FSHVFG + LE+ L++ KI GP WL+ + + S CK E+ +
Sbjct: 449 PSDLNSEKFSHVFGGGTGILESFLVQNKIMGPCWLDIKNGDFETLQNTSHCKLEISVSNP 508
Query: 558 EKIRITNVCGNVLSRTL 574
I+ G V + +
Sbjct: 509 SDIKPIEDSGEVFLKCM 525
>gi|71841810|gb|AAZ43188.1| DNA polymerase alpha [Euplotes aediculatus]
Length = 1404
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 264/706 (37%), Positives = 384/706 (54%), Gaps = 44/706 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEA----- 615
++TN+ GN+ R+L +ERNE LLLH F+ K+++ PDK+Y K + ++ +
Sbjct: 703 QLTNIAGNLWFRSLXNAXAERNEMLLLHEFNRKNFICPDKEYNKKPLKNQDEEKEEEDDD 762
Query: 616 -NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV------ 668
N GK RKKAAY GGLVL+PK G YDK ++L+DFNSLYPSIIQEYN+CFTT+
Sbjct: 763 ENYGK-RKKAAYEGGLVLDPKPGLYDKIVLLLDFNSLYPSIIQEYNLCFTTVERCVTHDF 821
Query: 669 --RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
R + D+ I + + Q ++ ILPS +K LV+ + K MK L Q +I
Sbjct: 822 DGREISDAKIDEVDVPILGEQQESAILPSILKMLVKQEKISKDQMKVEK-DKGKLDQLEI 880
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDT 785
+QKALKLTANSMYGCLGF +SRF+A+ +AAL+T KGR+ L T + N L Y V+YGDT
Sbjct: 881 KQKALKLTANSMYGCLGFSSSRFYAKAIAALITRKGRDALKATYDIANNILGYNVVYGDT 940
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
DS+M+S N+ IG++IK E NK YK LE+++DGV++ LLLKKKKYAAL L
Sbjct: 941 DSIMVSTGSNNLKDAILIGDEIKKEVNKKYKHLEIELDGVFRSPLLLKKKKYAALVYEDL 1000
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
++ +E+KG+ +VRRDW L+ G +V+ +IL +S D N+ +
Sbjct: 1001 NDPNSFRKKEVKGLXMVRRDWCPLSKAIGNYVLGEILSSKSQ-----DXXQINLRAYFTD 1055
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT--IS 963
+ L N + + ITKQLT+ P EY + PHV +A R+ SK + + I
Sbjct: 1056 MXDKLKNNEIKMKDFIITKQLTRPPSEYNNPDTFPHVVIANRMIKEQSKSANELTSMYIP 1115
Query: 964 YIICEDGTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
YIIC+ G ++ QRAY EE+ K L+ID ++YLSQQI+P ++RL+E IEG D I
Sbjct: 1116 YIICQ-GEAKQYAQRAYLPEEIQKAQGNLQIDYDWYLSQQIYPPISRLIEHIEGIDGRFI 1174
Query: 1023 AECLGLDTSLYRSQI-KESIQQSEE-----NILGVGEAEEV--KYQFCDKFEFTCMNPSC 1074
EC GLD + + S++ EE L V + ++ KY K++ T P
Sbjct: 1175 CECFGLDAKKHAGMAGRNSVENKEEETYQQKFLDVAKNKDNLEKYIGLTKYKLTKRVPGD 1234
Query: 1075 KQVNTVEAPTRLSTHGVVF--VLDECINPECKVP-PYTYLPHLINKLSQDMNKYIVKYYE 1131
P L G F L I+ + P P +Y+ + I L +DM + YYE
Sbjct: 1235 PSSEYEAFPGVLHPGGKNFDQFLSGLIDKKTGKPLPDSYIKNRIKLLIKDMMR---DYYE 1291
Query: 1132 GWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKAL 1191
G C + C TR K + K +V E + ++ + D K
Sbjct: 1292 GRYVCCEESCKQETRTLHEPNKCVVPHCNSXLKAAKV-NEKGVTDTFNYLERLFDAEKVK 1350
Query: 1192 --TKSDTPSIKFDSETYMG-YCKMKQHVERFLESSAYNIVDLKKLF 1234
TK+ I+ +M + K+K+ + +S+AY+ ++L ++F
Sbjct: 1351 KNTKAQNEIIEEALIDHMNIFKKIKEKISLIRQSNAYDKINLSQVF 1396
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 131/255 (51%), Gaps = 21/255 (8%)
Query: 313 KVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPL 372
K D +E+ A + + + P+V + E + TEP ++ T D PL
Sbjct: 218 KNDFKEIETDIVANQHTNNLTPKVFDGDVEMEDVSEHMNTEP------LNLSTDDKKRPL 271
Query: 373 ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
+ +N +F++D E+ Q VYLFGK++ +SS C++V+ I+R +Y +P
Sbjct: 272 PLNSDN--TLSVFWIDGHEEXINQ-SEVYLFGKIYDSSVKKYSSICLVVKGINRVLYCVP 328
Query: 433 RSEHLKTKEPVSIAQVYSEFDQI-ATQYK-ILDFKSRKIEKKYAFNLPGVPDLSEYLEVR 490
KE VSI V++E ++ ++K I FKS+ EK Y F P + LE+R
Sbjct: 329 -------KEGVSIGDVHTEISKLFEERFKYIKKFKSKPAEKNYCFETPLKKGKNSVLEIR 381
Query: 491 YSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI--SWC 548
YS++ LP +L+G TF H+FG +S LE L+++ K+ GP WL K +++ SWC
Sbjct: 382 YSSEYATLPPNLTGKTFQHIFGKNTSVLELLIIQLKLMGPCWLTVKNP-KVNTQVKKSWC 440
Query: 549 KYEVQCNQMEKIRIT 563
YEV + I+ T
Sbjct: 441 DYEVIVDVPSNIQCT 455
>gi|385304086|gb|EIF48119.1| dna polymerase alpha catalytic subunit [Dekkera bruxellensis
AWRI1499]
Length = 569
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/538 (39%), Positives = 318/538 (59%), Gaps = 24/538 (4%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK 604
I + +Q + K ++TN+ GN SRTL G R+ RNE++LLH F ++PDK+ +
Sbjct: 31 IGDVAFGIQILSLSK-QLTNLAGNAWSRTLGGTRAGRNEYILLHEFTRNGXIVPDKEXXR 89
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
K+ G E +KA Y GGLV EP KG ++ +MDFNSLYPSIIQE+NICFT
Sbjct: 90 QKRHGTSDNEPATAAAGRKAKYQGGLVFEPVKGLVKNYVTVMDFNSLYPSIIQEFNICFT 149
Query: 665 TIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
T+ L + ++ + P + G+LP + +LV RR+VK L+K P +S+ +QY
Sbjct: 150 TVDRSKLTEDELPEV----PSPETPRGVLPKLLHELVSRRREVKKLLKDPRISTQERIQY 205
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGD 784
DI+Q+ALK TANSMYGCLG+ NSRF+A+PLA LVT +GREIL++T+ L E+L V+YGD
Sbjct: 206 DIKQRALKXTANSMYGCLGYXNSRFYAKPLAMLVTNRGREILMDTRHLAESLGMRVVYGD 265
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
TDS+M+ + K + N YK LE+ ID V+K MLL KKKYAA++ +
Sbjct: 266 TDSVMVDTGCDTMKEALKFAEDFRKRVNDRYKLLEIGIDNVFKKMLLHAKKKYAAVNCTI 325
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
G S E+KG+D+ RR++ L+ E F++ ++L D ++ L I+ +++
Sbjct: 326 NXXGXESTSLEVKGLDMKRREYCPLSKEVSTFILEKVLG-----DNDPEEALTAIYGYLE 380
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
I T L B +P+ L+I +L+K P +Y K +P VQVALRL + K K G I++
Sbjct: 381 GITTKLXBNXIPMVKLKINTRLSKDPVQYPGGKTMPAVQVALRLRD-QGKIXKAGSVITF 439
Query: 965 IICEDGTSEAAT--QRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
II + + A+ +RA +I+E L + SK + D ++YL +Q+ ++RLLE IEG D VR
Sbjct: 440 IITNEBXDKXASVAERARSIQEVLSDQSKYEPDADFYLEKQLFAPISRLLEKIEGYDVVR 499
Query: 1022 IAECLGLDTSLY----RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCK 1075
+A+ LGLD+ Y RS +E Q E+ + E +F D +F P C+
Sbjct: 500 LAQSLGLDSRKYEARARSLEREXGLQPLESTVTDSE------RFRDAKDFLINCPKCQ 551
>gi|256271651|gb|EEU06692.1| Pol1p [Saccharomyces cerevisiae JAY291]
Length = 1468
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/660 (37%), Positives = 377/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 766 YRIQLLSLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 824
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 825 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 884
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 885 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKT-ETDPHKRVQCDIR 939
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 940 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 999
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 1000 VMIDTGCDNYADAIKIGLGFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 1059
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 1060 GNGTTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 1114
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1115 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1173
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 1174 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 1232
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1233 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1288
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1289 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1344
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1345 WLQCDDSTCGIVTRQVSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1400
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 157/612 (25%), Positives = 260/612 (42%), Gaps = 110/612 (17%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEF--TADENVYEEVSEKEYTERVLKRQE--------- 102
K+ K +KL+ + YE + + +Y+E+ EKEY R KRQE
Sbjct: 4 KSEKLEKLRKLQAARNGTSIDDYEGDESDGDRIYDEIDEKEYRAR--KRQELLHDDFVVD 61
Query: 103 ---DDWIDDDGGDGYVEDGREIFDDDI-EDVPQKKEKHDKRKKNKNIQNPNAKGDIQK-- 156
++D G ED RE+ + ED K KRKKN + + D+ +
Sbjct: 62 DDGVGYVDR----GVEEDWREVDNSSSDEDTGNLASKDSKRKKNIKREKDHQITDMLRTQ 117
Query: 157 -----LLANMPVKKKKKEEVQLNN-DDVLADLLS-EV---NTTIAPTLKLN---TKTNEI 203
LLA+ KK +K+ + ++N DD+L + S EV N + L+ N + T+E
Sbjct: 118 HSKSTLLAH--AKKSQKKSIPIDNFDDILGEFESGEVEKPNILLPSKLRENLNSSPTSEF 175
Query: 204 VIPKEEPPAPTAKEYLANFSKPIKVE--KKIEKPIKKEPSPLKDEIKS-------NDSVM 254
+ + A SK +K++ +K ++ E SPLK + + D +
Sbjct: 176 KSSIKRVNGNDESSHDAGISKKVKIDPDSSTDKYLEIESSPLKLQSRKLRYANDVQDLLD 235
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
+VE + +K + V +Q N Q + E+ + + I + V
Sbjct: 236 DVENSPVVATKRQNV-------LQDTLLANPPSAQSLADEEDDEDSDEDIILKRRTMRSV 288
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTS------EPQVHSRTADD 368
T ++ S STSP T P T P S++ D
Sbjct: 289 TTTRRVNIDSRSNPSTSP-----------------FVTAPGTPIGIKGLTPSKSSQSNTD 331
Query: 369 SLPLATDHENKKV-------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIV 421
LA + + + V F+MF+LD E T+ LFGKV +K++N S+ V +
Sbjct: 332 VATLAVNVKKEDVVDPETDTFQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQI 386
Query: 422 QNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
+ R+++ LPR + K P I + + +Y + + +++ + KY+F LP +P
Sbjct: 387 NGLCRELFFLPR----EGKTPTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIP 440
Query: 482 DLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP 536
S+YL+V + P +PSDLS DTF HVFG S+ E+ +++ +I GP WL+
Sbjct: 441 SESDYLKVLLPYQTPKSSRDTIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIK 500
Query: 537 EAEKFPSR-ISWCKYEVQCNQMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LL 586
A+ R S C EV ++ + I T C ++ +TLM + + E +
Sbjct: 501 GADFNSIRNASHCAVEVSVDRPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSIT 560
Query: 587 LHAFHEKSYVLP 598
L A+ S P
Sbjct: 561 LSAYRNISLDSP 572
>gi|47118289|gb|AAT11255.1| DNA polymerase alpha [Holosticha sp. WJC-2003]
Length = 1483
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 264/718 (36%), Positives = 403/718 (56%), Gaps = 60/718 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK--------EGEET 612
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ NK+ E E+
Sbjct: 779 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKQLTNKELKRGLFGEEDEQG 838
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PVR 669
+ KG RKKA YSGGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ P +
Sbjct: 839 DDKKKGGKRKKAQYSGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRRPTK 898
Query: 670 MLQDSDI------------TTLCEYLPEH--QVDTGILPSEIKKLVESRRQVKALMKQPN 715
+DI LP+ + + +LP+ ++ LV+ R+ VK MK
Sbjct: 899 NYNGTDIKNDFKGEGEEDNEEETVELPDKNTKANDAVLPNVLRDLVQKRKAVKDKMKTEK 958
Query: 716 LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN 775
L Q +IRQKA+KLTANSMYGCLGF +SRF A+ +AAL+T GRE LL TK + EN
Sbjct: 959 -DPIKLQQLEIRQKAIKLTANSMYGCLGFASSRFHAKAIAALITRTGRETLLRTKDIAEN 1017
Query: 776 -LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKK 834
L + V+YGDTDS+MI+ N ++G ++K+E N LYK LE++IDGV+K +LLLKK
Sbjct: 1018 KLGFNVVYGDTDSIMINTGCNQLQMALEMGKKLKAEVNCLYKCLEIEIDGVFKSLLLLKK 1077
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
KKYAAL + QE+KG+D+VRRDW QL+ G +V++QIL + + L
Sbjct: 1078 KKYAALKYENWTTPDAKIVQEMKGLDMVRRDWCQLSKTVGNYVLAQILSGKQREEVVL-- 1135
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR---LNNT 951
N++E++ I + +PL ITKQLT+A EY+D K PHV +A+R L +
Sbjct: 1136 ---NLNEYLSDIGQKMKACEIPLAEYIITKQLTRAISEYSDIKGQPHVIIAMRQKALGKS 1192
Query: 952 NSKKLKQGDTISYIICE-----DGTSEAATQRAYNIEELKNN-SKLKIDVNYYLSQQIHP 1005
S+ + + I Y+IC+ + + +A++ EE+ N+ K +ID+++Y++ QI P
Sbjct: 1193 ESELV--NNFIPYVICKKPFDAEKLTPQLADKAFHPEEVINSRGKHEIDIDWYITAQILP 1250
Query: 1006 VVTRLLEPIEGTDAVRIAECLGLDTSLYR--SQIKESIQQSEEN------ILGVGEAEEV 1057
+TRL+E I+G D +A+CLG+D Y+ S+ K S+ E++ IL + +
Sbjct: 1251 PITRLIEHIDGIDVEFVAQCLGVDPKKYKYHSEKKNSVDGVEDSGPVSNPILHTETEKSL 1310
Query: 1058 KYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINK 1117
K++ + + C+ P C + + V +C +P +++N+
Sbjct: 1311 KHRSIAELKIRCLGPDCGEYYDFPGIYQEGKDVSGLVCKKC---NGGIPE----QYVMNR 1363
Query: 1118 LSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQ 1177
++ + + I+ YY+ +C +P C +R+ + K + TC K K+ Y+E Q
Sbjct: 1364 INLFLKQLIMLYYQAPYECNEPHCKQKSRQLLVNNKC-VIPTC-KGKMTAEYSEQQTNDT 1421
Query: 1178 LSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
L + + ++ + ++ D Y +K V+ +E S YN VDLK +FS
Sbjct: 1422 LRYIQGLFNVRTYIHENKLAKHVDDIPHSQSYSVLKTKVDSVMERSKYNKVDLKNIFS 1479
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 21/256 (8%)
Query: 323 SSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVH--SRTA----DDSLPLATDH 376
S V+ P Q+ +++ K +W+ I+ + ++ V S A D LP D
Sbjct: 283 SRMVDEQQVEPMQIEKQQSPKEDDWQKIKQQQXNNQESVKIDSNAALNQYDYPLPFNPDG 342
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP---- 432
+++DA E+ Q +Y+FGK++ E S SC + V + R++Y LP
Sbjct: 343 S----LSFYWIDAHEENNGQ--DIYIFGKIYQPEVKSFVSCALKVNGMQREMYALPKIKN 396
Query: 433 --RSEHLKTKEPVSIAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSEYLE 488
RS K +E + ++ E D I + +I +K + + +KYAF +P ++L+
Sbjct: 397 KARSALSKEEEDKQVMNIFHELDDIRKKRFTQITKWKCKPVMRKYAFEMPIQHGEHKFLK 456
Query: 489 VRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISW 547
V+Y P+LP L+G+TF VFG S LE L+L+RKIKGP W +K + +W
Sbjct: 457 VKYDCTMPSLPPGLTGNTFECVFGANQSMLELLILKRKIKGPCWFTLKSPQKVTDFKKTW 516
Query: 548 CKYEVQCNQMEKIRIT 563
C+ E+ N ++I +T
Sbjct: 517 CRQEIFINDPKQIEVT 532
>gi|298705331|emb|CBJ49021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1612
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 253/638 (39%), Positives = 357/638 (55%), Gaps = 91/638 (14%)
Query: 615 ANKGKG--RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
AN G G RKKAAY+GGLVLEPKKG YD++I+L+DFNSLYPS+IQEYN+CFTT+
Sbjct: 945 ANSGGGARRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTM---NWA 1001
Query: 673 DSDITTLCEY---------------------LPEHQVDTGILPSEIKKLVESRRQVKALM 711
D++T + LP +D G+LP I+ LVE R VK ++
Sbjct: 1002 ACDMSTPAQGGEDDMDEDDGAAASAGPKLPDLPAEGMDIGVLPRVIRTLVERRSVVKKML 1061
Query: 712 KQ---PNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
K+ P+ +L DIRQKALKLTANSMYGCLGF SRF+A+P+AALVTA+GRE L
Sbjct: 1062 KKEKDPSRKQEL----DIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQR 1117
Query: 769 TKSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYK 827
T L EN L EVIYGDTDS+MI+ + D V IGNQ+K E NKLYK LELD+DGV+K
Sbjct: 1118 TVDLSENQLGLEVIYGDTDSVMINTHSTDLKQVKDIGNQVKREVNKLYKSLELDLDGVFK 1177
Query: 828 YMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY 887
MLLLKKKKYAAL + + +G + +E+KG+D+VRR+W L+ + GKFV+ ++L ++
Sbjct: 1178 SMLLLKKKKYAALVVVEHPDGSITYDKEMKGLDLVRREWCTLSKDTGKFVLDRVLSGEAR 1237
Query: 888 TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR 947
+ + IH+H++ + + G V + ITK L KAP EY D K+ PHVQVAL
Sbjct: 1238 -----ETVVTGIHDHLEALAASMRAGEVEVPRYVITKGLNKAPHEYPDAKSQPHVQVALA 1292
Query: 948 LNNTNSKKLKQGDTISYIICE-DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPV 1006
+ K + G I Y++C+ +G + A + + + L++ KL++DV +YL+QQI P
Sbjct: 1293 MMKAG-KSVNVGHHIPYVMCKIEGATSPAERARHPDDVLRSGGKLEVDVEWYLNQQIVPP 1351
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFE 1066
V+RL EPIEGT +AE +GLD S + S N G + ++ + K
Sbjct: 1352 VSRLCEPIEGTSMAVLAEKMGLDASKF---------TSHANAAGGDDGDDWAFTPTSKL- 1401
Query: 1067 FTCMNPSCKQVNTVEAPTRLSTHGV--------VFVLD--ECINPECKVPPYTYLPH--- 1113
P ++ VE P +++ VF D + +N + P P+
Sbjct: 1402 -----PDAERFRGVE-PLKMTCRACHEQAEFQGVFSWDRKKAVNGPADLRPGLMCPNSAC 1455
Query: 1114 ----------------LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLC 1157
L +L+ + +++ YY+ L+C+D C LTR G+ C
Sbjct: 1456 GAYYWGAGSEAACVSTLYQRLTLAVRRHLKVYYQTHLRCDDSSCGLLTRST--GVMGVAC 1513
Query: 1158 TT--CHKYKLHRVYTELQLYQQLSFFHYICDITKALTK 1193
C +L + Y + LY QL +F + D+ +A TK
Sbjct: 1514 PAKGCQG-RLVQEYPDKTLYDQLKYFETLFDVDRAQTK 1550
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 50/228 (21%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFV-----------------KENNSHSSCCV 419
E + RMF+LDA E Q GT+YL GKV V + S CV
Sbjct: 449 ETGEFMRMFWLDATE----QNGTIYLIGKVAVPSPSSGSASASPQGDSGAAGTTFLSACV 504
Query: 420 IVQNIDRKIYLLPR---------------SEHLKTKEPVSIAQVYSEFDQ------IATQ 458
V +I+R++ +LPR + + I VY E I
Sbjct: 505 AVHSIEREVLVLPRLVEKDGEYSDGDEDAGGGGGSAKRADIGAVYQEMASVLVPRVIKRN 564
Query: 459 YKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSDL---SGDTFSHVFGTK 514
K F+ + + +KYAF VP + ++YL+++Y A PALP D+ G TF +FG +
Sbjct: 565 AKGEQFRCKPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGAR 624
Query: 515 SSFLENLLLERKIKGPSWLEF--PEAEKFPSRISWCKYEVQCNQMEKI 560
+ +E+ L++RK+ GP W+ P+ P +SWCK EV + I
Sbjct: 625 TPLIESFLIKRKLMGPCWITVRNPKVNNAP--VSWCKVEVAAQSPKSI 670
>gi|398364843|ref|NP_014297.3| Pol1p [Saccharomyces cerevisiae S288c]
gi|1706503|sp|P13382.2|DPOA_YEAST RecName: Full=DNA polymerase alpha catalytic subunit A; AltName:
Full=DNA polymerase I subunit A; AltName: Full=DNA
polymerase alpha:primase complex p180 subunit; Short=DNA
polymerase-primase complex p180 subunit; Short=Pol
alpha-primase complex p180 subunit
gi|929851|emb|CAA90524.1| DNA Polymerase I [Saccharomyces cerevisiae]
gi|1302016|emb|CAA95978.1| CDC17 [Saccharomyces cerevisiae]
gi|285814549|tpg|DAA10443.1| TPA: Pol1p [Saccharomyces cerevisiae S288c]
gi|392296888|gb|EIW07989.1| Pol1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1468
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/660 (37%), Positives = 377/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 766 YRIQLLTLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 824
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 825 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 884
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 885 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKTET-DPHKRVQCDIR 939
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 940 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 999
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 1000 VMIDTGCDNYADAIKIGLGFKRLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 1059
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 1060 GNGTTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 1114
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1115 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1173
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 1174 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 1232
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1233 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1288
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1289 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1344
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1345 WLQCDDSTCGIVTRQVSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1400
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 155/604 (25%), Positives = 258/604 (42%), Gaps = 94/604 (15%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEF--TADENVYEEVSEKEYTERVLKRQE--------- 102
K+ K +KL+ + YE + + +Y+E+ EKEY R KRQE
Sbjct: 4 KSEKLEKLRKLQAARNGTSIDDYEGDESDGDRIYDEIDEKEYRAR--KRQELLHDDFVVD 61
Query: 103 ---DDWIDDDGGDGYVEDGREIFDDDI-EDVPQKKEKHDKRKKNKNIQNPNAKGDIQK-- 156
++D G ED RE+ + ED K KRKKN + + D+ +
Sbjct: 62 DDGVGYVDR----GVEEDWREVDNSSSDEDTGNLASKDSKRKKNIKREKDHQITDMLRTQ 117
Query: 157 -----LLANMPVKKKKKEEVQLNN-DDVLADLLS-EV---NTTIAPTLKLN---TKTNEI 203
LLA+ KK +K+ + ++N DD+L + S EV N + L+ N + T+E
Sbjct: 118 HSKSTLLAH--AKKSQKKSIPIDNFDDILGEFESGEVEKPNILLPSKLRENLNSSPTSEF 175
Query: 204 VIPKEEPPAPTAKEYLANFSKPIKVE--KKIEKPIKKEPSPLKDEIKS-------NDSVM 254
+ + A SK +K++ +K ++ E SPLK + + D +
Sbjct: 176 KSSIKRVNGNDESSHDAGISKKVKIDPDSSTDKYLEIESSPLKLQSRKLRYANDVQDLLD 235
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
+VE + +K + V +Q N Q + E+ + + I + V
Sbjct: 236 DVENSPVVATKRQNV-------LQDTLLANPPSAQSLADEEDDEDSDEDIILKRRTMRSV 288
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLAT 374
T ++ S STSP A I + T + S T +L +
Sbjct: 289 TTTRRVNIDSRSNPSTSP---------FVTAPGTPIGIKGLTPSKSLQSNTDVATLAVNV 339
Query: 375 DHEN-----KKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
E+ F+MF+LD E T+ LFGKV +K++N S+ V + + R+++
Sbjct: 340 KKEDVVDPETDTFQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQINGLCRELF 394
Query: 430 LLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
LPR + K P I + + +Y + + +++ + KY+F LP +P S+YL+V
Sbjct: 395 FLPR----EGKTPTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIPSESDYLKV 448
Query: 490 RYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR 544
+ P +PSDLS DTF HVFG S+ E+ +++ +I GP WL+ A+ R
Sbjct: 449 LLPYQTPKSSRDTIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIKGADFNSIR 508
Query: 545 -ISWCKYEVQCNQMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LLLHAFHEKS 594
S C EV ++ + I T C ++ +TLM + + E + L A+ S
Sbjct: 509 NASHCAVEVSVDKPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSITLSAYRNIS 568
Query: 595 YVLP 598
P
Sbjct: 569 LDSP 572
>gi|207341723|gb|EDZ69700.1| YNL102Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1386
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/660 (37%), Positives = 378/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 684 YRIQLLTLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 742
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 743 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 802
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 803 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKT-ETDPHKRVQCDIR 857
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 858 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 917
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 918 VMIDTGCDNYADAIKIGLGFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 977
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 978 GNGTTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 1032
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
+++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1033 IKVESNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1091
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 1092 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 1150
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1151 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1206
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1207 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1262
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1263 WLQCDDSTCGIVTRQVSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1318
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 26/233 (11%)
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTK 440
F+MF+LD E T+ LFGKV +K++N S+ V + + R+++ LPR + K
Sbjct: 269 TFQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQINGLCRELFFLPR----EGK 319
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP---- 496
P I + + +Y + + +++ + KY+F LP +P S+YL+V + P
Sbjct: 320 TPTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIPSESDYLKVLLPYQTPKSSR 377
Query: 497 -ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCKYEVQC 554
+PSDLS DTF HVFG S+ E+ +++ +I GP WL+ A+ R S C EV
Sbjct: 378 DTIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIKGADFNSIRNASHCAVEVSV 437
Query: 555 NQMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LLLHAFHEKSYVLP 598
++ + I T C ++ +TLM + + E + L A+ S P
Sbjct: 438 DKPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSITLSAYRNISLDSP 490
>gi|172209|gb|AAA34888.1| polymerase I [Saccharomyces cerevisiae]
Length = 1468
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/660 (37%), Positives = 377/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 766 YRIQLLTLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 824
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 825 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 884
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 885 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKTET-DPHKRVQCDIR 939
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 940 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 999
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 1000 VMIDTGCDNYADAIKIGLGFKRLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 1059
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 1060 GNGTTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 1114
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1115 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1173
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 1174 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 1232
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1233 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1288
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1289 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1344
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1345 WLQCDDSTCGIVTRQVSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1400
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 155/604 (25%), Positives = 258/604 (42%), Gaps = 94/604 (15%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEF--TADENVYEEVSEKEYTERVLKRQE--------- 102
K+ K +KL+ + YE + + +Y+E+ EKEY R KRQE
Sbjct: 4 KSEKLEKLRKLQAARNGTSIDDYEGDESDGDRIYDEIDEKEYRAR--KRQELLHDDFVVD 61
Query: 103 ---DDWIDDDGGDGYVEDGREIFDDDI-EDVPQKKEKHDKRKKNKNIQNPNAKGDIQK-- 156
++D G ED RE+ + ED K KRKKN + + D+ +
Sbjct: 62 DDGVGYVDR----GVEEDWREVDNSSSDEDTGNLASKDSKRKKNIKREKDHQITDMLRTQ 117
Query: 157 -----LLANMPVKKKKKEEVQLNN-DDVLADLLS-EV---NTTIAPTLKLN---TKTNEI 203
LLA+ KK +K+ + ++N DD+L + S EV N + L+ N + T+E
Sbjct: 118 HSKSTLLAH--AKKSQKKSIPIDNFDDILGEFESGEVEKPNILLPSKLRENLNSSPTSEF 175
Query: 204 VIPKEEPPAPTAKEYLANFSKPIKVE--KKIEKPIKKEPSPLKDEIKS-------NDSVM 254
+ + A SK +K++ +K ++ E SPLK + + D +
Sbjct: 176 KSSIKRVNGNDESSHDAGISKKVKIDPDSSTDKYLEIESSPLKLQSRKLRYANDVQDLLD 235
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
+VE + +K + V +Q N Q + E+ + + I + V
Sbjct: 236 DVENSPVVATKRQNV-------LQDTLLANPPSAQSLADEEDDEDSDEDIILKRRTMRSV 288
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDSLPLAT 374
T ++ S STSP A I + T + S T +L +
Sbjct: 289 TTTRRVNIDSRSNPSTSP---------FVTAPGTPIGIKGLTPSKSLQSNTDVATLAVNV 339
Query: 375 DHEN-----KKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIY 429
E+ F+MF+LD E T+ LFGKV +K++N S+ V + + R+++
Sbjct: 340 KKEDVVDPETDTFQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQINGLCRELF 394
Query: 430 LLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
LPR + K P I + + +Y + + +++ + KY+F LP +P S+YL+V
Sbjct: 395 FLPR----EGKTPTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIPSESDYLKV 448
Query: 490 RYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR 544
+ P +PSDLS DTF HVFG S+ E+ +++ +I GP WL+ A+ R
Sbjct: 449 LLPYQTPKSSRDTIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIKGADFNSIR 508
Query: 545 -ISWCKYEVQCNQMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LLLHAFHEKS 594
S C EV ++ + I T C ++ +TLM + + E + L A+ S
Sbjct: 509 NASHCAVEVSVDKPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSITLSAYRNIS 568
Query: 595 YVLP 598
P
Sbjct: 569 LDSP 572
>gi|190409091|gb|EDV12356.1| DNA polymerase I alpha subunit p180 [Saccharomyces cerevisiae
RM11-1a]
Length = 1468
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/660 (37%), Positives = 377/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 766 YRIQLLTLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 824
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 825 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 884
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 885 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKT-ETDPHKRVQCDIR 939
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 940 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 999
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 1000 VMIDTGCDNYADAIKIGLGFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 1059
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 1060 GNGTTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 1114
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1115 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1173
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 1174 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 1232
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1233 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1288
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1289 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1344
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1345 WLQCDDSTCGIVTRQVSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1400
Score = 103 bits (257), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 157/612 (25%), Positives = 260/612 (42%), Gaps = 110/612 (17%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEF--TADENVYEEVSEKEYTERVLKRQE--------- 102
K+ K +KL+ + YE + + +Y+E+ EKEY R KRQE
Sbjct: 4 KSEKLEKLRKLQAARNGTSIDDYEGDESDGDRIYDEIDEKEYRAR--KRQELLHDDFVVD 61
Query: 103 ---DDWIDDDGGDGYVEDGREIFDDDI-EDVPQKKEKHDKRKKNKNIQNPNAKGDIQK-- 156
++D G ED RE+ + ED K KRKKN + + D+ +
Sbjct: 62 DDGVGYVDR----GVEEDWREVDNSSSDEDTGNLASKDSKRKKNIKREKDHQITDMLRTQ 117
Query: 157 -----LLANMPVKKKKKEEVQLNN-DDVLADLLS-EV---NTTIAPTLKLN---TKTNEI 203
LLA+ KK +K+ + ++N DD+L + S EV N + L+ N + T+E
Sbjct: 118 HSKSTLLAH--AKKSQKKSIPIDNFDDILGEFESGEVEKPNILLPSKLRENLNSSPTSEF 175
Query: 204 VIPKEEPPAPTAKEYLANFSKPIKVE--KKIEKPIKKEPSPLKDEIKS-------NDSVM 254
+ + A SK +K++ +K ++ E SPLK + + D +
Sbjct: 176 KSSIKRVNGNDESSHDAGISKKVKIDPDSSTDKYLEIESSPLKLQSRKLRYANDVQDLLD 235
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
+VE + +K + V +Q N Q + E+ + + I + V
Sbjct: 236 DVENSPVVATKRQNV-------LQDTLLANPPSAQSLADEEDDEDSDEDIILKRRTMRSV 288
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTS------EPQVHSRTADD 368
T ++ S STSP T P T P S++ D
Sbjct: 289 TTTRRVNIDSRSNPSTSP-----------------FVTAPGTPIGIKGLTPSKSSQSNTD 331
Query: 369 SLPLATDHENKKV-------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIV 421
LA + + + V F+MF+LD E T+ LFGKV +K++N S+ V +
Sbjct: 332 VATLAVNVKKEDVVDPETDTFQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQI 386
Query: 422 QNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
+ R+++ LPR + K P I + + +Y + + +++ + KY+F LP +P
Sbjct: 387 NGLCRELFFLPR----EGKTPTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIP 440
Query: 482 DLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP 536
S+YL+V + P +PSDLS DTF HVFG S+ E+ +++ +I GP WL+
Sbjct: 441 SESDYLKVLLPYQTPKSSRDTIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIK 500
Query: 537 EAEKFPSR-ISWCKYEVQCNQMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LL 586
A+ R S C EV ++ + I T C ++ +TLM + + E +
Sbjct: 501 GADFNSIRNASHCAVEVSVDKPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSIT 560
Query: 587 LHAFHEKSYVLP 598
L A+ S P
Sbjct: 561 LSAYRNISLDSP 572
>gi|365763311|gb|EHN04840.1| Pol1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1468
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/660 (37%), Positives = 377/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 766 YRIQLLTLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 824
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 825 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 884
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 885 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKT-ETDPHKRVQCDIR 939
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 940 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 999
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 1000 VMIDTGCDNYADAIKIGLGFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 1059
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 1060 GNGTTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 1114
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1115 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1173
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 1174 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 1232
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1233 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1288
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1289 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1344
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1345 WLQCDDSTCGIVTRQXSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1400
Score = 103 bits (258), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 157/612 (25%), Positives = 260/612 (42%), Gaps = 110/612 (17%)
Query: 54 KTNKFAAFQKLKDLKGQGVKHKYEF--TADENVYEEVSEKEYTERVLKRQE--------- 102
K+ K +KL+ + YE + + +Y+E+ EKEY R KRQE
Sbjct: 4 KSEKLEKLRKLQAARNGTSIDDYEGDESDGDRIYDEIDEKEYRAR--KRQELLHDDFVVD 61
Query: 103 ---DDWIDDDGGDGYVEDGREIFDDDI-EDVPQKKEKHDKRKKNKNIQNPNAKGDIQK-- 156
++D G ED RE+ + ED K KRKKN + + D+ +
Sbjct: 62 DDGVGYVDR----GVEEDWREVDNSSSDEDTGNLASKDSKRKKNIKREKDHQITDMLRTQ 117
Query: 157 -----LLANMPVKKKKKEEVQLNN-DDVLADLLS-EV---NTTIAPTLKLN---TKTNEI 203
LLA+ KK +K+ + ++N DD+L + S EV N + L+ N + T+E
Sbjct: 118 HSKSTLLAH--AKKSQKKSIPIDNFDDILGEFESGEVEKPNILLPSKLRENLNSSPTSEF 175
Query: 204 VIPKEEPPAPTAKEYLANFSKPIKVE--KKIEKPIKKEPSPLKDEIKS-------NDSVM 254
+ + A SK +K++ +K ++ E SPLK + + D +
Sbjct: 176 KSSIKRVNGNDESSHDAGISKKVKIDPDSSTDKYLEIESSPLKLQSRKLRYANDVQDLLD 235
Query: 255 EVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKV 314
+VE + +K + V +Q N Q + E+ + + I + V
Sbjct: 236 DVENSPVVATKRQNV-------LQDTLLANPPSAQSLADEEDDEDSDEDIILKRRTMRSV 288
Query: 315 DVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTS------EPQVHSRTADD 368
T ++ S STSP T P T P S++ D
Sbjct: 289 TTTRRVNIDSRSNPSTSP-----------------FVTAPGTPIGIKGLTPSKSSQSNTD 331
Query: 369 SLPLATDHENKKV-------FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIV 421
LA + + + V F+MF+LD E T+ LFGKV +K++N S+ V +
Sbjct: 332 VATLAVNVKKEDVVDPETDTFQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQI 386
Query: 422 QNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP 481
+ R+++ LPR + K P I + + +Y + + +++ + KY+F LP +P
Sbjct: 387 NGLCRELFFLPR----EGKTPTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIP 440
Query: 482 DLSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFP 536
S+YL+V + P +PSDLS DTF HVFG S+ E+ +++ +I GP WL+
Sbjct: 441 SESDYLKVLLPYQTPKSSRDTIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIK 500
Query: 537 EAEKFPSR-ISWCKYEVQCNQMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LL 586
A+ R S C EV ++ + I T C ++ +TLM + + E +
Sbjct: 501 GADFNSIRNASHCAVEVSVDKPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSIT 560
Query: 587 LHAFHEKSYVLP 598
L A+ S P
Sbjct: 561 LSAYRNISLDSP 572
>gi|6015011|sp|Q94636.1|DPOLA_OXYNO RecName: Full=DNA polymerase alpha catalytic subunit
gi|405121|gb|AAA21587.1| large subunit of DNA polymerase alpha [Sterkiella nova]
Length = 1492
Score = 385 bits (988), Expect = e-103, Method: Compositional matrix adjust.
Identities = 268/724 (37%), Positives = 401/724 (55%), Gaps = 63/724 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK--------EGEET 612
++TN+ GN+ R+L R+ERNE LLLH F +K +VLPDK+ K E EE
Sbjct: 767 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFVLPDKKQLNAKDLKKNMFADEYEEG 826
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
KG RKKAAY+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R +
Sbjct: 827 DGKTKGGKRKKAAYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRRPTK 886
Query: 673 DSDITTL-CEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALMKQ 713
+ D + + +Y LP+ V+ +LP ++ LV+ R+ VK MK
Sbjct: 887 NFDGSEMKNQYKKGENGEEEVDIEEADLPDKNVNLKDAVLPMVLRDLVQKRKAVKDKMKT 946
Query: 714 PNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV 773
L Q +IRQKA+KLTANSMYGCLGF +SRF AQ +AAL+T GRE LL TK +
Sbjct: 947 EK-DHVKLSQLEIRQKAIKLTANSMYGCLGFGSSRFHAQAIAALITRTGRETLLRTKDIA 1005
Query: 774 EN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLL 832
EN L + V+YGDTDS+MI+ N ++G ++K E N LYK LE++IDGV+K +LLL
Sbjct: 1006 ENKLGFNVVYGDTDSIMINTGSNQLQQALEMGKRLKGEVNCLYKCLEIEIDGVFKSLLLL 1065
Query: 833 KKKKYAALSISK-LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KKKKYAAL LS ++ QE+KG+D+VRRDW L+ G++V+ QIL + +
Sbjct: 1066 KKKKYAALKYENFLSPAEVKVVQEMKGLDMVRRDWCPLSKRVGRYVLDQILSGKQREEVV 1125
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
L N++E + I +L G + L ITKQ+TKA +Y D K PHV VA RL +
Sbjct: 1126 L-----NLNEFLSNIGNELKEGTIKLNEFIITKQITKAISDYNDIKGQPHVAVAKRLRDQ 1180
Query: 952 N-SKKLKQGDTISYIICEDG------TSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQI 1003
S+ + I Y+IC+ +S A + +AY+ +E + + K+ ID ++Y+S Q+
Sbjct: 1181 GKSENQLVNNFIPYVICQQTYGDTTKSSTALSDKAYHPDEVISSRGKVTIDSDWYVSTQL 1240
Query: 1004 HPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--SQIKESIQQSEE------NILGVGEAE 1055
P +TRL+E IEG + +A+CLGLD YR S+ K + +++ +L
Sbjct: 1241 LPPITRLIEHIEGIEVEFVAQCLGLDPKKYRYHSEKKNTDNPTDDPLIVSNPVLQTETER 1300
Query: 1056 EVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLI 1115
+K + + C P C S++ C+ ++P +++
Sbjct: 1301 SLKNRTVAELNIKC--PHCAHNYHFPGILVPSSNNTELTGLACVKCNQRIPD----AYML 1354
Query: 1116 NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLY 1175
N+L+ + + YY G +C++P C T + L L + K K++ Y+EL++
Sbjct: 1355 NRLNLFLKQLTALYYLGMKECKEPQCGMKTNQ--LLLNNKCIVKGCKGKMNSEYSELRIN 1412
Query: 1176 QQLSFFHYICDITKALTKSDTPSIKFDS----ETYMGYCKMKQHVERFLESSAYNIVDLK 1231
L + + ++ K L +++ K++ + + ++++ VE F+ S YN VDL
Sbjct: 1413 DTLRYLEGLFNVKKFLIENEKYRKKYEKPELVPNFQSFKELQKKVESFMIRSGYNKVDLG 1472
Query: 1232 KLFS 1235
+F
Sbjct: 1473 NIFG 1476
Score = 133 bits (334), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 130/534 (24%), Positives = 250/534 (46%), Gaps = 59/534 (11%)
Query: 72 VKHKYEFTADENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFD--DDIEDV 129
+KH + + ++EE+ + EY + R+ DD+I DD G GY + G EI+D D+E+V
Sbjct: 2 IKHILQVEETKKIFEEIDDNEYEKIQDSRKNDDFIVDDDGYGYRDHGGEIWDRDGDVEEV 61
Query: 130 PQKKEK-HDKRKKNKNIQNPNAKGDIQKLLANM----PVKKKKKEEVQLNNDDVLADLLS 184
+KK+K + N+NI N K +N P ++K + + D++ +L
Sbjct: 62 GKKKKKKQNNHDPNENIMNYMMPASTLKKKSNAASTNPSAQQKPKVSVEQSRDIMNNLFQ 121
Query: 185 EVNTTIAPTLK-LNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPL 243
+++ L+ +N N V P A +E N + +E ++E
Sbjct: 122 QLDAKDVDELEDVNEAKNMFVQEMNRPVAFNKEEDFNN-----RYSVTLESREEQERRRQ 176
Query: 244 KDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDV---------LPE 294
+++K ++ + + +V SK+ +D+ ++Q+Q + + + Q + V +
Sbjct: 177 SEQLKQQANIGQNQSDVNPFSKKRKLDE--FQQVQANSYQSKQNSHSVSKSKPGDHEMAN 234
Query: 295 QAK-VELQIEAIE---------SQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKC 344
A V+L + AI+ S+ I + + V SV+ + ST+ Q+ E
Sbjct: 235 HADGVDLNLLAIDDTKMTDSHPSEIITQNQRASAVSSVNQQIMESTNGKNQL----EKND 290
Query: 345 AEWEAIQTEPST-------SEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQP 397
EW+ ++ + + ++ + S D LPL D +++DA E+
Sbjct: 291 TEWQQMKEKNAVFNQDLRMNDNALMSNQQDYPLPLNED----GTLSFYWIDAHEE--NNG 344
Query: 398 GTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP------RSEHLKTKEPVSIAQVYSE 451
+++FGK++ E SC + V + R++++LP R+ +E +V E
Sbjct: 345 ADLFVFGKIYQHEERKFVSCSIKVNGMQRELFVLPKMSGKSRAAMTTEEEKEQARKVMME 404
Query: 452 FDQIATQY-KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHV 510
+ + ++ I ++ + + +KYAF LP ++++++Y A P+LPS + G+TF +
Sbjct: 405 LEGVRKRFPAITKWRCKPVTRKYAFELPIQHGEHQFVKIKYDATFPSLPSTVQGNTFECI 464
Query: 511 FGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWCKYEVQCNQMEKIRIT 563
FG S LE+ +L+RKI+GP W+ +K R +WCK E+ + + I IT
Sbjct: 465 FGANQSMLESFILKRKIRGPCWMTIRNPQKVTDFRRTWCKQEILVSNPKDIEIT 518
>gi|71841808|gb|AAZ43187.1| DNA polymerase alpha [Euplotes octocarinatus]
Length = 1403
Score = 385 bits (988), Expect = e-103, Method: Compositional matrix adjust.
Identities = 268/707 (37%), Positives = 396/707 (56%), Gaps = 45/707 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN----KKEGEETGEAN 616
++TN+ GN+ R+L R+ERNE+LLLH F+ +++ PDK+ K E ++ E
Sbjct: 701 QLTNIAGNLWYRSLQNARAERNEWLLLHEFNRNNFICPDKELNKKPTKDHDEDKDEEEEE 760
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV-------- 668
K RKKAAY GGLVL+PK G YDK ++L+DFNSLYPSIIQEYN+CFTT+
Sbjct: 761 KHGKRKKAAYEGGLVLDPKPGLYDKIVLLLDFNSLYPSIIQEYNLCFTTVERCVTHDFDG 820
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
R + D+ I + + + + ILPS +K LV++RR VK MK L Q +I+Q
Sbjct: 821 REISDAKIDEVDVPVYDQKQGPAILPSILKMLVQARRAVKDQMKXEK-DKGKLDQLEIKQ 879
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDS 787
KA+KLTANSMYGCLGF +SRF+A+ +AAL+T KGR+ L T + N LNY V+YGDTDS
Sbjct: 880 KAIKLTANSMYGCLGFSSSRFYAKAIAALITRKGRDALKATYDITTNVLNYNVVYGDTDS 939
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+M+S N+ +IG+QIK E NK YK LE+++DGV++ +LLLKKKKYAAL + L++
Sbjct: 940 IMVSTGSNNLKEAIQIGDQIKKEVNKKYKNLEIELDGVFRSLLLLKKKKYAALVYTDLND 999
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ-NIHEHMKKI 906
+E+KG+D+VRRDW L+ G V+ +IL ++ D +Q N+ + ++
Sbjct: 1000 PNSFSKREVKGLDMVRRDWCPLSKAIGNQVLKEILSSKN------QDEIQINLRAYFTEM 1053
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ--GDTISY 964
L N + ++ ITKQLT+AP EY + + PHV +A R+ SK + + + Y
Sbjct: 1054 AEKLKNNEITMSNFIITKQLTRAPSEYNNPETFPHVVIANRMIREQSKTISELTNSYVPY 1113
Query: 965 IICEDGTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIA 1023
IICE G S+ QRAY+ EE+ K N LK+D ++YLSQQI+P ++RL+E IEG D I
Sbjct: 1114 IICE-GESKQYAQRAYHPEEIVKANGALKVDHDWYLSQQIYPPISRLIEHIEGIDGRFIC 1172
Query: 1024 ECLGLDTSLYRSQIKESIQQS--EEN----ILGVGEAEEV--KYQFCDKFEFTCMNPSCK 1075
EC GLD + + + ++ EEN L V + ++ KY K++ T P
Sbjct: 1173 ECFGLDAKKHTGMVNTNSTENKEEENYQQKFLDVAKNKDNLEKYIGLTKYKLTTRIPGDS 1232
Query: 1076 QVNTVEAPTRLSTHGVVF--VLDECINPECKVP-PYTYLPHLINKLSQDMNKYIVKYYEG 1132
+ P + G F L I+ + K P Y+ + I L ++M + YYEG
Sbjct: 1233 KSEYESFPGIIHVRGKNFDEYLSGLIDKKTKKQLPEAYIKNRIKLLVKEMMR---DYYEG 1289
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALT 1192
C + C T+ K + K K +V E + ++ + D T+A
Sbjct: 1290 RYVCCEESCKQETKTLYEPNKCIISNCNSKLKAVKV-NEKGVADTFNYLERLFD-TEAKK 1347
Query: 1193 KSDTPSIKFDSETYMG----YCKMKQHVERFLESSAYNIVDLKKLFS 1235
K SE Y ++K V+ + +AY+ ++L ++F+
Sbjct: 1348 KGAKEQTDLISEAIFDHIAHYKRIKDKVKLIRQHNAYDKINLDQVFN 1394
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 139/273 (50%), Gaps = 23/273 (8%)
Query: 294 EQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTE 353
EQ +V++ +Q + K + N+ S ++ VE+S S H+ A E
Sbjct: 202 EQEQVQIDNSFSLNQENDXKENEGNI-SANNNVEMSASI--------SHEGDVEMADDNE 252
Query: 354 PSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNS 413
P+ +E SR D LPL + +N +F+LD E+ Q VYLFGKV+
Sbjct: 253 PNNTESVNISR-EDKKLPLPLNSDN--TLSVFWLDGHEESINQ-SEVYLFGKVYNPTYKR 308
Query: 414 HSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQI-ATQYK-ILDFKSRKIEK 471
+SS C++V+ I+R +Y +P KE I V SE ++ ++K I +K++ I K
Sbjct: 309 YSSICLVVRGINRIMYCVP-------KEEFEIKDVLSEISKLFDDRFKSIKKWKTKPISK 361
Query: 472 KYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPS 531
Y F P SE LE+RYS + LP++L+G TF H+FG +S LE L+++ K+ GP
Sbjct: 362 NYCFETPMKKGQSEVLEIRYSTEYQQLPANLTGKTFHHIFGKNTSALELLIIQLKLMGPC 421
Query: 532 WLEFPEAE-KFPSRISWCKYEVQCNQMEKIRIT 563
WL + ++ SWC YE+ + I+ T
Sbjct: 422 WLTVKNPKINTQNKRSWCDYEIIVDVPSNIQCT 454
>gi|259149259|emb|CAY82501.1| Pol1p [Saccharomyces cerevisiae EC1118]
Length = 1356
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 245/660 (37%), Positives = 377/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 654 YRIQLLTLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 712
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 713 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 772
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 773 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKT-ETDPHKRVQCDIR 827
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 828 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 887
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 888 VMIDTGCDNYADAIKIGLGFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 947
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 948 GNGTTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 1002
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 1003 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1061
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 1062 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 1120
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1121 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1176
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1177 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1232
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1233 WLQCDDSTCGIVTRQVSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1288
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 26/233 (11%)
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTK 440
F+MF+LD E T+ LFGKV +K++N S+ V + + R+++ LPR + K
Sbjct: 239 TFQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQINGLCRELFFLPR----EGK 289
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP---- 496
P I + + +Y + + +++ + KY+F LP +P S+YL+V + P
Sbjct: 290 TPTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIPSESDYLKVLLPYQTPKSSR 347
Query: 497 -ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCKYEVQC 554
+PSDLS DTF HVFG S+ E+ +++ +I GP WL+ A+ R S C EV
Sbjct: 348 DTIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIKGADFNSIRNASHCAVEVSV 407
Query: 555 NQMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LLLHAFHEKSYVLP 598
++ + I T C ++ +TLM + + E + L A+ S P
Sbjct: 408 DKPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSITLSAYRNISLDSP 460
>gi|45190983|ref|NP_985237.1| AER381Cp [Ashbya gossypii ATCC 10895]
gi|44984051|gb|AAS53061.1| AER381Cp [Ashbya gossypii ATCC 10895]
Length = 1435
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 246/673 (36%), Positives = 373/673 (55%), Gaps = 57/673 (8%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
+ +Q + K ++TN+ GN TL G R+ RNEF+LLH F+ +Y+LPDK+ + +
Sbjct: 735 FRIQILSLTK-QLTNLAGNSWGHTLGGTRAGRNEFILLHEFYRNNYILPDKESRQMRSAR 793
Query: 610 EETG--------EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
++ + KKA Y GGLV +P KG + +I++MDFNSLYPSIIQE+NI
Sbjct: 794 QQQNVDTPDGDVATDSRNSNKKAKYQGGLVFDPDKGLHKNYILVMDFNSLYPSIIQEFNI 853
Query: 662 CFTTIPVRMLQDSDITTLCEYLPE--HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSD 719
CFTT+ R D D LP+ + G+LP + LVE RR+VK LM N +D
Sbjct: 854 CFTTVE-RNPHDID------ELPQVPTEAKPGVLPRLLANLVERRREVKKLM---NAETD 903
Query: 720 LL--MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN 777
+ DIRQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E+L
Sbjct: 904 AHKKAECDIRQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESLG 963
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
V+YGDTDS+MI ++Y IG K N+ Y+ LE+DID V+K +LL KKKY
Sbjct: 964 LAVVYGDTDSVMIDTGCDNYREALSIGENFKKLVNERYRLLEIDIDNVFKKLLLHAKKKY 1023
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
AAL++S G I S E+KG+D+ RR++ L+ E V++ IL +Q + L+
Sbjct: 1024 AALNVSFDKAGNEITSLEVKGLDMRRREYCPLSKEVSTQVLNTILSDQDS-----ESALE 1078
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
N++++M+ I++ ++N + +I +L+K P+ Y + K +P VQVAL++ + +
Sbjct: 1079 NVYDYMETIKSKIENNEIRADKFKINTRLSKDPKSYPNGKTMPAVQVALKMRAV-GRVVN 1137
Query: 958 QGDTISYIICEDGTSEA----ATQRAYNIEELKNNSK-LKIDVNYYLSQQIHPVVTRLLE 1012
G I++++ + GT E+ RA + E+ N + L D YYL +QI V RLL+
Sbjct: 1138 AGTVITFVVTK-GTDESEQSNPADRARPLHEVMNKANGLVPDPMYYLEKQIFAPVERLLQ 1196
Query: 1013 PIEGTDAVRIAECLGLDTSLYRSQIKESI-QQSEENILGVGEAEEVKYQFCDKFEFTCMN 1071
IE D VR+ LG+D + + +++S +SE L ++ +++ TC
Sbjct: 1197 KIESFDVVRLGNALGIDGRRFINNVQDSTSNRSELQPLESTISDMERFKDATAMRVTC-- 1254
Query: 1072 PSCKQVNTVEAPTRLSTHGVV------FVLDECINPECKVPPYTYLP-HLINKLSQDMNK 1124
PSC+ + G+V F +CK + + P L ++L +
Sbjct: 1255 PSCQ--------AKFPFGGIVASNHYQFTYSGL---QCKACNHIFAPLQLTSQLEFAIRA 1303
Query: 1125 YIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYI 1184
+I +Y W+ C+DP C +TR+ + K L C +H Y++ QLY QL +F +
Sbjct: 1304 HISLFYAAWMVCDDPTCGTVTRQLSVFGKRCLNEACTGV-MHYRYSDKQLYNQLLYFDSL 1362
Query: 1185 CDITKALTKSDTP 1197
D+TK + P
Sbjct: 1363 FDVTKTKNRDLKP 1375
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 222/482 (46%), Gaps = 67/482 (13%)
Query: 81 DEN-VYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDGREIFDDDIEDV------P 130
DEN VY+ V E+++ E+ +R+E DD++ DD G GYV +G + + D DV P
Sbjct: 34 DENRVYDLVGEEQFQEQ--RRRELLRDDFVVDDDGQGYVNNGLDEWADTRGDVSSDENDP 91
Query: 131 QKKEKHDKRKKNKNIQNPNAKGDIQKLLAN------MPVKKKKKEEVQLNNDDVLADLLS 184
Q+++ +K+ + + D+ +++AN +P +KK K + DD+L + S
Sbjct: 92 QQRQASNKK---------DGRRDLIEMMANAQKSRAVPQQKKVKRVDESAFDDILEEF-S 141
Query: 185 EVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLK 244
V+T + P ++ ++ EE + K A I + + + P+
Sbjct: 142 VVHTAVKPLARVTSEKRLSGDDGEEISSKRIKSDTA--MAAIDSSPTLSRQARALPA--V 197
Query: 245 DEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEA 304
+ + S+D+ + +A ++ P+ + +++ D +D E +V L A
Sbjct: 198 NSLASDDADIHTS-PIAATTRSSPL------KTEVNKLDMLLDNED--SEDDEVYLGRRA 248
Query: 305 IESQSIEEKVDV-TNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHS 363
I S + V+ +SVSS + + P + + + +T + +S
Sbjct: 249 IRSAAASRHVNFGAKFKSVSSPIGAKPTDLPHSDPDLQPMTSPLKGSETPSYDNFNNKYS 308
Query: 364 RTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQN 423
+ +D + ATD F MF+LD E ++ LFGK+ N H S V V
Sbjct: 309 K--EDIVDQATDS-----FSMFWLDYTE----LETSLLLFGKIKTL-NGKHISAMVQVAG 356
Query: 424 IDRKIYLLPRSEHLKTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPGVPD 482
I R++Y LPR E + +V+ E + +Y + +++ +K YAF L +P
Sbjct: 357 IYRELYFLPR-------EGKTALEVHEEIIPLLMDKYGLSTIRAKPEKKMYAFELADIPK 409
Query: 483 LSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPE 537
+EYL+V + P +PSDL GDTF HVFG SS E+ +++R+I GP WL +
Sbjct: 410 EAEYLKVLLPYETPKCKNVVIPSDLCGDTFCHVFGGNSSIFESFVIQRRILGPCWLSIKQ 469
Query: 538 AE 539
+
Sbjct: 470 GD 471
>gi|374108462|gb|AEY97369.1| FAER381Cp [Ashbya gossypii FDAG1]
Length = 1435
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 245/671 (36%), Positives = 372/671 (55%), Gaps = 53/671 (7%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
+ +Q + K ++TN+ GN TL G R+ RNEF+LLH F+ +Y+LPDK+ + +
Sbjct: 735 FRIQILSLTK-QLTNLAGNSWGHTLGGTRAGRNEFILLHEFYRNNYILPDKESRQMRSAR 793
Query: 610 EETG--------EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
++ + KKA Y GGLV +P KG + +I++MDFNSLYPSIIQE+NI
Sbjct: 794 QQQNVDTPDGDVATDSRNSNKKAKYQGGLVFDPDKGLHKNYILVMDFNSLYPSIIQEFNI 853
Query: 662 CFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
CFTT+ DI L + E + G+LP + LVE RR+VK LM N +D
Sbjct: 854 CFTTVE---RNPHDIDELPQVPTEAK--PGVLPRLLANLVERRREVKKLM---NAETDAH 905
Query: 722 --MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYE 779
+ DIRQ+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E+L
Sbjct: 906 KKAECDIRQQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESLGLA 965
Query: 780 VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAA 839
V+YGDTDS+MI ++Y IG K N+ Y+ LE+DID V+K +LL KKKYAA
Sbjct: 966 VVYGDTDSVMIDTGCDNYREALSIGENFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAA 1025
Query: 840 LSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNI 899
L++S G I S E+KG+D+ RR++ L+ E V++ IL +Q + L+N+
Sbjct: 1026 LNVSFDKAGNEITSLEVKGLDMRRREYCPLSKEVSTQVLNTILSDQDS-----ESALENV 1080
Query: 900 HEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQG 959
+++M+ I++ ++N + +I +L+K P+ Y + K +P VQVAL++ + + G
Sbjct: 1081 YDYMETIKSKIENNEIRADKFKINTRLSKDPKSYPNGKTMPAVQVALKMRAV-GRVVNAG 1139
Query: 960 DTISYIICEDGTSEA----ATQRAYNIEELKNNSK-LKIDVNYYLSQQIHPVVTRLLEPI 1014
I++++ + GT E+ RA + E+ N + L D YYL +QI V RLL+ I
Sbjct: 1140 TVITFVVTK-GTDESEQSNPADRARPLHEVMNKANGLVPDPMYYLEKQIFAPVERLLQKI 1198
Query: 1015 EGTDAVRIAECLGLDTSLYRSQIKESI-QQSEENILGVGEAEEVKYQFCDKFEFTCMNPS 1073
E D VR+ LG+D + + +++S +SE L ++ +++ TC PS
Sbjct: 1199 ESFDVVRLGNALGIDGRRFINNVQDSTSNRSELQPLESTISDMERFKDATAMRVTC--PS 1256
Query: 1074 CKQVNTVEAPTRLSTHGVV------FVLDECINPECKVPPYTYLP-HLINKLSQDMNKYI 1126
C+ + G+V F +CK + + P L ++L + +I
Sbjct: 1257 CQ--------AKFPFGGIVASNHYQFTYSGL---QCKACNHIFAPLQLTSQLEFAIRAHI 1305
Query: 1127 VKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICD 1186
+Y W+ C+DP C +TR+ + K L C +H Y++ QLY QL +F + D
Sbjct: 1306 SLFYAAWMVCDDPTCGTVTRQLSVFGKRCLNEACTGV-MHYRYSDKQLYNQLLYFDSLFD 1364
Query: 1187 ITKALTKSDTP 1197
+TK + P
Sbjct: 1365 VTKTKNRDLKP 1375
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 222/482 (46%), Gaps = 67/482 (13%)
Query: 81 DEN-VYEEVSEKEYTERVLKRQE---DDWIDDDGGDGYVEDGREIFDDDIEDV------P 130
DEN VY+ V E+++ E+ +R+E DD++ DD G GYV +G + + D DV P
Sbjct: 34 DENRVYDLVGEEQFQEQ--RRRELLRDDFVVDDDGQGYVNNGLDEWADTRGDVSSDENDP 91
Query: 131 QKKEKHDKRKKNKNIQNPNAKGDIQKLLAN------MPVKKKKKEEVQLNNDDVLADLLS 184
Q+++ +K+ + + D+ +++AN +P +KK K + DD+L + S
Sbjct: 92 QQRQASNKK---------DGRKDLIEMMANAQKSRAVPQQKKVKRVDESAFDDILEEF-S 141
Query: 185 EVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLK 244
V+T + P ++ ++ EE + K A I + + + P+
Sbjct: 142 VVHTAVKPLARVTSEKRLSGDDGEEISSKRIKSDTA--MAAIDSSPTLSRQARALPA--V 197
Query: 245 DEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEA 304
+ + S+D+ + +A ++ P+ + +++ D +D E +V L A
Sbjct: 198 NSLASDDADIHTS-PIAATTRSSPL------KTEVNKLDMLLDNED--SEDDEVYLGRRA 248
Query: 305 IESQSIEEKVDV-TNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHS 363
I S + V+ +SVSS + + P + + + +T + +S
Sbjct: 249 IRSAAASRHVNFGAKFKSVSSPIGAKPTDLPHSDPDLQPMTSPLKGSETPSYDNFNNKYS 308
Query: 364 RTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQN 423
+ +D + ATD F MF+LD E ++ LFGK+ N H S V V
Sbjct: 309 K--EDIVDQATDS-----FSMFWLDYTE----LETSLLLFGKIKTL-NGKHISAMVQVAG 356
Query: 424 IDRKIYLLPRSEHLKTKEPVSIAQVYSEF-DQIATQYKILDFKSRKIEKKYAFNLPGVPD 482
I R++Y LPR E + +V+ E + +Y + +++ +K YAF L +P
Sbjct: 357 IYRELYFLPR-------EGKTALEVHEEIIPLLMDKYGLSTIRAKPEKKMYAFELADIPK 409
Query: 483 LSEYLEVRYSAKCP-----ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPE 537
+EYL+V + P +PSDL GDTF HVFG SS E+ +++R+I GP WL +
Sbjct: 410 EAEYLKVLLPYETPKCKNVVIPSDLCGDTFCHVFGGNSSIFESFVIQRRILGPCWLSIKQ 469
Query: 538 AE 539
+
Sbjct: 470 GD 471
>gi|71064097|gb|AAZ22505.1| Pol1p [Saccharomyces cerevisiae]
Length = 1302
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 245/660 (37%), Positives = 377/660 (57%), Gaps = 45/660 (6%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 600 YRIQLLSLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 658
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 659 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 718
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 719 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKT-ETDPHKRVQCDIR 773
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 774 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 833
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 834 VMIDTGCDNYADAIKIGLGFKKLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 893
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 894 GNETTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 948
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 949 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 1007
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 1008 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 1066
Query: 1018 DAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEV-----KYQFCDKFEFTCMNP 1072
+ VR++E LGLD+ Y +E + E+I + E +++ E +C P
Sbjct: 1067 NVVRLSEALGLDSKKYFR--REGGNNNGEDINNLQPLETTITDVERFKDTVTLELSC--P 1122
Query: 1073 SCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEG 1132
SC + + + V + +C + E P L +++ + +I YY G
Sbjct: 1123 SCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPL----QLTSQIEHSIRAHISLYYAG 1178
Query: 1133 WLKCEDPGCSDLTRRCPLGLKTRL---CTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
WL+C+D C +TR+ + K L CT +YK Y++ QLY QL +F + D K
Sbjct: 1179 WLQCDDSTCGIVTRQVSVFGKRCLNDGCTGVMRYK----YSDKQLYNQLLYFDSLFDCEK 1234
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 117/232 (50%), Gaps = 26/232 (11%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE 441
F+MF+LD E T+ LFGKV +K++N S+ V + + R+++ LPR + K
Sbjct: 186 FQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQINGLCRELFFLPR----EGKT 236
Query: 442 PVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP----- 496
P I + + +Y + + +++ + KY+F LP +P S+YL+V + P
Sbjct: 237 PTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIPSESDYLKVLLPYQTPKSSRD 294
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCKYEVQCN 555
+PSDLS DTF HVFG S+ E+ +++ +I GP WL+ A+ R S C EV +
Sbjct: 295 TIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIKGADFNSIRNASHCAVEVSVD 354
Query: 556 QMEKIRITNV-------CGNVLSRTLMGGRSERNEF--LLLHAFHEKSYVLP 598
+ + I T C ++ +TLM + + E + L A+ S P
Sbjct: 355 KPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIVSITLSAYRNISLDSP 406
>gi|302686118|ref|XP_003032739.1| hypothetical protein SCHCODRAFT_67364 [Schizophyllum commune H4-8]
gi|300106433|gb|EFI97836.1| hypothetical protein SCHCODRAFT_67364 [Schizophyllum commune H4-8]
Length = 1394
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 247/710 (34%), Positives = 370/710 (52%), Gaps = 96/710 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKN----KKEGEETGEAN 616
++T + GN ++TL GGR+ERNE++LLH FH Y+ PDK YGK +++ +E G
Sbjct: 742 QLTQLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKTYGKKAAPVREDPDEEGGGT 801
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
KG K+ Y GGLVL PK+ ++ +I++MDFNSLYPSIIQEYNI FTT+ + +DI
Sbjct: 802 SKKGAKRDKYKGGLVLAPKRQLWETYILVMDFNSLYPSIIQEYNIDFTTVS----RGTDI 857
Query: 677 TTLCE---YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ---YDIRQKA 730
+ LP + G+LP I LV RRQVK LMK N++ +Q YDI+Q+A
Sbjct: 858 GQTPDDEAELPSSEAGQGVLPRLIATLVSRRRQVKNLMKDKNVTQAQYLQVCIYDIKQQA 917
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTAN+M+ L+ V+YGDTDS+ +
Sbjct: 918 LKLTANTMF------------------------------------LSLLVVYGDTDSVFV 941
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ N + KI N+ K N Y+ LE+D+DGV++ +LLL+KKKYAA+ + +
Sbjct: 942 NSNQTELSKALKIANEFKKAVNDRYRLLEIDLDGVFQRLLLLQKKKYAAIKVDGSTT--- 998
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
+ EIKG+D+ RR++SQL+ ++V+ +IL + + ++ IHE++ KI D+
Sbjct: 999 --TTEIKGLDMKRREYSQLSKRVSQYVLDRILSGE-----PTEIVVEEIHEYLAKIGEDV 1051
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC--- 967
G VPL I K+L K PE+Y D K+ PHVQVALR+ S + GD I Y+ C
Sbjct: 1052 RGGKVPLDEFIIFKRLGKNPEDYPDAKSQPHVQVALRMKAKGSSA-RAGDVIPYVFCLPE 1110
Query: 968 --EDGTSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
E + RA + +++ ++ S L ID +YLSQQ+ P + RL EPIEGTD R+AE
Sbjct: 1111 GEETAGKTSQADRAKHPDDVRRSGSGLIIDYEHYLSQQVLPPIERLCEPIEGTDRARLAE 1170
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
CLGLD Y+ S + S + L ++ +++ C F C CK +
Sbjct: 1171 CLGLDPQRYKVSNSASDELS-ISTLETQMSDRERFKDCVAFFVRCRK--CKATDVFARLN 1227
Query: 1085 RLSTHGVVFVLDECINPE---C-----KVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC 1136
+ D ++P+ C K+ P++ L +L + +I +YYEGW C
Sbjct: 1228 EQTVDPTGVPRDPMLHPDGAKCTACQEKLQPWS----LEMQLQAQIRGFITRYYEGWTVC 1283
Query: 1137 EDPGCSDLTRRCPLGLKTRLCT--TCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKS 1194
+DP C TRR +G+ C C K+ YT+ QLY QL +F + D+ KA +
Sbjct: 1284 DDPTCGQRTRR--MGVYGHNCVREGCQG-KVSFEYTDAQLYTQLKYFSSLFDVEKAFEIA 1340
Query: 1195 DTP-SIKFDSETYMGYCK--------MKQHVERFLESSAYNIVDLKKLFS 1235
+ + + + + G ++ +R+L+ V L LFS
Sbjct: 1341 KSKGNARVEHDKVQGLAAGNVVLLDTLRACTDRYLDMCGRRWVSLNNLFS 1390
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 236/529 (44%), Gaps = 61/529 (11%)
Query: 55 TNKFAAFQKLKDLKG--QGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGG 111
+N+ + ++L +LK G K + D +Y+EVSE++Y V R QEDD+++DDG
Sbjct: 2 SNRKSKLEQLAELKRVRAGGKRVLKQEEDTEIYDEVSEEQYRAIVRGRLQEDDFVEDDGV 61
Query: 112 DGYVEDGREIFD---DDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKK 168
DGY++ G E ++ D +D + + K KK+ + + +M + K
Sbjct: 62 DGYMDTGVEEWEATRDYDDDEEDDRRRDKKSKKSAKGKAKAKPPPPPQPAPSMNAYRPKV 121
Query: 169 EEVQLNNDDVLADLLSEVNTT-IAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIK 227
E Q D +A+LL E++T + P L T ++ PAP+ + + +
Sbjct: 122 TEEQ--EQDFMANLLGELDTVPVKPALTTRTS-------RKRKPAPSPERKSSTDKYRYR 172
Query: 228 VEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQ 287
+ ++PI+ SP K ++ ++A ++ D L +DWDN
Sbjct: 173 ERDREDEPIR---SPTKRPRTEATTMAATTNSLAAMDFDDITMDDL------NDWDNDMD 223
Query: 288 TQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEW 347
P + KV+ E + + + SA P + ++ K +
Sbjct: 224 FD--FPAKPKVDPPPAKPEV--------LVDKKPFPSANATPAKPKEKEIDTKPSWINVY 273
Query: 348 EAIQTE------PSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVY 401
E++ PST+ D+L E R F+LD E G VY
Sbjct: 274 ESLNVAETDKLGPSTTTHTSAQHAGIDAL------EPDGSLRFFWLDYLE----LNGNVY 323
Query: 402 LFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK---------TKEPVSIAQVYSEF 452
GK+ K+ N SCCV V+NI+R +++LPR + ++ T EPV + VY++F
Sbjct: 324 FIGKLKDKKTNQWHSCCVTVENIERNLFVLPREKRVEQGSDGEIYDTDEPVEMEDVYNDF 383
Query: 453 DQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSDLSGDTFSHVF 511
D I KI +K + +++KYAF VP S +L+V Y P +P D +F
Sbjct: 384 DMIRGALKIKQWKGKFVKRKYAFGDKEVPRGESTWLKVVYPFTEPTIPMDAISPNILKIF 443
Query: 512 GTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKI 560
GT +S E L+L+RKI GP WL+ + +SWCK+E + + I
Sbjct: 444 GTNTSAFELLVLKRKIMGPCWLQIKNPDVNFKGVSWCKFEATVSDPKDI 492
>gi|281203060|gb|EFA77261.1| DNA polymerase alpha catalytic subunit [Polysphondylium pallidum
PN500]
Length = 1518
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 252/691 (36%), Positives = 400/691 (57%), Gaps = 50/691 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN+ +R+L G R+ER E+LLLH FH + +VLPDK + K+K G
Sbjct: 841 QLTNLAGNLWNRSLAGNRAERIEYLLLHNFHAEKFVLPDKIFSKDK-----------DFG 889
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+KKAAYSGGLVL+PK GFYD++++L+DFNSLYPSIIQEYN+CFTTI ++ +D + +
Sbjct: 890 KKKAAYSGGLVLDPKAGFYDRYVVLLDFNSLYPSIIQEYNVCFTTIERKLREDGNRSING 949
Query: 681 EY----LPEHQVDTGILPSEIKKLVESRRQVK-ALMKQPNLSSDLLMQYDIRQKALKLTA 735
Y P V GILP+ +++LV RR+VK +L + N +L Q DI+Q+A+KL A
Sbjct: 950 GYESAQPPASSVSRGILPTVLQRLVAKRREVKRSLASESN--EELKQQLDIKQQAIKLVA 1007
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
NSMYGCLGF +SRF+A PLA LVT KGRE L + + +NY+V+YGDTDSLMI+ V+
Sbjct: 1008 NSMYGCLGFKSSRFYALPLAELVTRKGRENLQKSSEIAGRMNYDVVYGDTDSLMINTGVS 1067
Query: 796 DYDSVFKIGNQIKSECNKLYKQ--LELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICS 853
Y+ IG +IK + N+ Y+ +E+++DG++K +LLLKKKKYAAL +K + +CS
Sbjct: 1068 TYNEAEAIGFEIKKKVNEQYRGSVMEIELDGIFKRLLLLKKKKYAALIETKKAG---VCS 1124
Query: 854 QEI--KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ-NIHEHMKKIRTDL 910
I KG+D+VRRDW + E G ++S I+ D ++ + LQ I E+++ + +
Sbjct: 1125 TFIQNKGIDIVRRDWCGVTKEIGNHLLSLIMS----PDDNVSNNLQFEIKEYVESMAQKM 1180
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
+ VP+ ITK L+ APE+Y D + PHVQVAL+L + ++QGD I Y+I + G
Sbjct: 1181 RSFEVPVENFVITKTLSSAPEDYNDGDSQPHVQVALQL-KAKGEVVQQGDQIPYVIVK-G 1238
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
+ A +RA + +EL+N++ L ID+++YLSQQI P + R++ ++ + ++A LG+ T
Sbjct: 1239 EDDWA-KRARHPKELENDASL-IDLDWYLSQQILPPLYRMVSLLD-VEEEKLATFLGMST 1295
Query: 1031 SLYRSQIKESIQQSEE----NILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL 1086
YR+ K Q+ EE N + + ++ C + EF C CK + + T +
Sbjct: 1296 RKYRAN-KPKHQEDEEFTIDNEIYRSLDSDARFSSCTRPEFRC--AFCKSLTQFKGITVV 1352
Query: 1087 STHGVVFVLD--ECINPECKVPPYTYLPHLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSD 1143
S + ++ C N CK P P +I N+LS + + ++ + ++C + C
Sbjct: 1353 SDKPICLAIEGLTCSNQACKQP---LSPSIIKNQLSLILRANVKQHQDYAMRCTE--CRS 1407
Query: 1144 LTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDS 1203
+++ + K+ ++ Q+ +QL +F + + + D D
Sbjct: 1408 VSKDYRRSDNIKCIDPYCNGKMEQLVKSEQILKQLEYFQRLFSVKHIKERFDNIEEHLDV 1467
Query: 1204 ETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+ +++ V L + ++K +F
Sbjct: 1468 QQIKLLNELEAQVSNLLNRHKGSTYEIKSIF 1498
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 24/201 (11%)
Query: 379 KKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENN--SHSSCCVIVQNIDRKIYLLPRSEH 436
K + ++L A E+ G +YLFGKV ENN + SCC I++ + R ++LLPR
Sbjct: 402 KNELQFYYLTASEE---NNGNIYLFGKVRSVENNVETFKSCCAIIEGMKRNVFLLPRDYI 458
Query: 437 L------KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAF-------NLPGVPDL 483
L TKEP + + ++ ++ KI + + +E+ F N P P
Sbjct: 459 LDDNGEPTTKEP-NEQLIRADVTKLMNSQKITGWTLKPVERSICFDYKVEGKNQP--PGK 515
Query: 484 SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWL---EFPEAEK 540
+ ++ Y A AL ++L+G TF V+G SS LE LL++KI GPSWL +F A
Sbjct: 516 YKLWKLCYPAAFSALKNELTGSTFQAVYGVTSSPLELFLLKKKIMGPSWLSLADFKPALS 575
Query: 541 FPSRISWCKYEVQCNQMEKIR 561
+ SWC+ E + + +K++
Sbjct: 576 MSEKTSWCRLEGKVDSYKKVK 596
>gi|325183116|emb|CCA17574.1| DNA polymerase alpha catalytic subunit putative [Albugo laibachii
Nc14]
Length = 1561
Score = 382 bits (980), Expect = e-102, Method: Compositional matrix adjust.
Identities = 248/698 (35%), Positives = 368/698 (52%), Gaps = 91/698 (13%)
Query: 561 RITNVCGNVLSRTLMGG-RSERNEFLLLHAFHEKS--YVLPDKQYGKNKKEGEETGEANK 617
++ N+CG + RTL R+ER EFLL H F + ++LP+K K+ +G
Sbjct: 832 QLANLCGYLWPRTLEANKRAERIEFLLSHEFSKSKHKFILPEK-----VKQSRGSG---- 882
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV--------- 668
GK R+KA+Y GG+V PKKG YD F++L+DFNSLYPSII+EYNICFTT+
Sbjct: 883 GKQREKASYMGGMVFSPKKGLYDNFVVLLDFNSLYPSIIREYNICFTTVDRKLEENTTST 942
Query: 669 ------RMLQDSDITTL--------CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP 714
RM +D+ + LP G+LP IK+L++SR+QVK +
Sbjct: 943 GKRGQKRMEGSTDVKSEENIDAEEDIPALPPASCGDGVLPGVIKRLLDSRKQVKQALVSA 1002
Query: 715 NLSS--DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSL 772
+ + D DIRQKA+KLTANSMYGCLGF SR++A+ +AAL+T+ GR+ L K +
Sbjct: 1003 SRAGQKDKAQSLDIRQKAIKLTANSMYGCLGFRYSRYYAKAIAALITSTGRQTLQRAKEV 1062
Query: 773 VE-NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLL 831
E Y+VIYGDTDS+M+ + +IG +I+++CNK ++ LEL++D ++K +LL
Sbjct: 1063 AELECGYDVIYGDTDSIMVDSRSDQLLDAKRIGREIQTQCNKHFELLELEVDSIFKTILL 1122
Query: 832 LKKKKYAALSI---SKLSNGKMI-CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY 887
L KKKYAAL + + SN +I +E+KG+D+VRRDW ++ G ++ QIL ++
Sbjct: 1123 LNKKKYAALVVKETTDTSNSIIIRYEKEVKGLDLVRRDWCVISKVVGNDILDQILSGKAR 1182
Query: 888 TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR 947
D+ + NIH +++ + T + + P+ ITK L K PE+Y D HVQVAL
Sbjct: 1183 -----DEVVDNIHMYLETVATRIRSELDPIDQFVITKSLNKQPEQYPDGAKQYHVQVALA 1237
Query: 948 LNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNS-KLKIDVNYYLSQQIHPV 1006
L + + G I Y++C+ + + AY+ +E+K + KL ID +YL QIHP
Sbjct: 1238 LKQ-QGQHIGVGSHIPYVLCKVQDPRSG-RYAYHPDEVKRAAGKLPIDYEWYLESQIHPP 1295
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTSLYR---SQIKESIQQSE-ENILGVGEAEEVKYQFC 1062
V RL IEGT ++++A+CLGLDTS ++ S I + + E ++I V ++ ++ C
Sbjct: 1296 VNRLCTHIEGTSSIQLAQCLGLDTSKFKNLSSNIGTNPEDDENDSIPSVLRDDQERFSHC 1355
Query: 1063 DKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDE-------------CINPECKVPPYT 1109
TC C Q + GV+F + C C+ +
Sbjct: 1356 VPLHLTCKQ--CHQSSNFP--------GVLFASGDDNGAAKTMQSGLLCPQSNCRAEFWG 1405
Query: 1110 YLPH-------------LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRL 1156
Y L N+L + +YYE WL C D C T++ L
Sbjct: 1406 YTEEGLYGNVGDDLAALLSNQLHLATRAAVRRYYEAWLVCSDVTCKTRTQKQSLRGNGNT 1465
Query: 1157 CTTCHKYKL-HRVYTELQLYQQLSFFHYICDITKALTK 1193
C+ L H YTE LY QL +F + D +A+ K
Sbjct: 1466 CSASGCQSLVHAEYTEYDLYTQLKYFSALFDPVRAMKK 1503
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 129/535 (24%), Positives = 234/535 (43%), Gaps = 64/535 (11%)
Query: 81 DENVYEEVSEKEYTERVLKRQED--DWIDDDGGDGYVEDGRE-IFDDDIEDVP--QKKEK 135
+ +VY+ V+E+EY + V +R++ +DD GY +DG E F+ D E P Q +
Sbjct: 46 ESSVYKVVTEEEYEDLVRQRRQGLPFVANDDAELGYYDDGEEQFFESDEEGNPSEQVEPS 105
Query: 136 HDKRKKNKNIQNPNAKGDIQKLLANMPVKKKKKEEVQLNN--DDVLADLLSEVNTTIAPT 193
HD +K I L + + KK + +L + D + LL ++ T
Sbjct: 106 HDDSGASKQ--------RIGALSSAYARRAKKLQRAKLGDGKDSKITSLLHSSSSMQMKT 157
Query: 194 LKLNTKTNEIV---------IPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLK 244
K KT+E + + ++ PT K E I+ +
Sbjct: 158 AK-RLKTSETMQKTDLDLNSMLEDLTSNPTKAGSSFLSPPSFSSFKDNESTIRMDDDFSY 216
Query: 245 DEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEA 304
+S ++ E + ++A + + D+ L ++ + D++ +T D PE+ K + E
Sbjct: 217 HMAESMATITENDDSLAYE-HDAASDNHLKCEVAEELGDHAMETTDDKPEEVKPPTKREV 275
Query: 305 IESQSIEEKVDVTN--VESVSSAV--------ELSTSPPPQVVEKKEHKCAEWEAIQTEP 354
+ ++ ++ TN ++SS E+ T V E ++ EW
Sbjct: 276 LLRKARARELLTTNPIARALSSEFDDKEEKPEEMKTIDIEPVGEIPSNEVMEWWQTSESC 335
Query: 355 STSEPQVHSRT-ADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNS 413
+ +P V +D L R+F++DA E I +PG +YL GKV V ++
Sbjct: 336 AHQDPVVEEDVKMEDPLEHGKTSSTSDRVRIFWMDAIE-IRDRPGKLYLIGKVKVVSGST 394
Query: 414 --HSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQ----------VYSEFDQIATQYKI 461
+ SCC+ V N++R +YL+P++E ++ +P + ++ + Q Y I
Sbjct: 395 ITYQSCCITVNNLERCMYLVPKTEAVQALDPKATTMNDLTPELQQALWMKMHQDIHHYLI 454
Query: 462 LD----------FKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSDL---SGDTF 507
+ FK++ +E++YAF +P ++Y++VRYSA+ P P D+ G F
Sbjct: 455 PNCITGRKDKENFKTKLVEREYAFEREDIPRGKNKYVKVRYSARYPITPPDICERGGRYF 514
Query: 508 SHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
S + G + LE LL RK+ GP W+E ++ S+C+ E + + I +
Sbjct: 515 SRICGASTRPLEIFLLGRKLLGPGWIEVCNVHASQNKESFCQLEYATDNPKGIHV 569
>gi|27413230|gb|AAG52946.1| type II DNA polymerase alpha [Urostyla grandis]
Length = 1356
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 253/611 (41%), Positives = 366/611 (59%), Gaps = 57/611 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-YGKNKKEGEETGEAN--- 616
++T++ GN+ R+L R+ERNE LLLH F+ K Y+ PDK + K+KK+ E+ N
Sbjct: 752 QLTSIAGNLWYRSLQNARAERNEMLLLHEFYGKKYLCPDKAPFSKDKKQFEDYENENLFG 811
Query: 617 ----KG--KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---P 667
KG K RKKA YSGGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ P
Sbjct: 812 NEEVKGNNKKRKKAQYSGGLVIEPKAGFYDTIILLLDFNSLYPSIIQEYNLCFTTVNRRP 871
Query: 668 VRMLQDSDITTLCEYLPEHQVDT---------GILPSEIKKLVESRRQVKALMKQPNLSS 718
+ +SDI + + + +V+ ILP+ +K LV+ R+ VK +K+ +
Sbjct: 872 SKNYDNSDIKSKQDENIDDEVELPDKGNTYKDAILPNVLKNLVQKRKIVKEQLKK---ET 928
Query: 719 DLL--MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN- 775
D + Q +IRQKA+KLTANSMYGCLGF +SRF A+ +AAL+T GRE LL TK + EN
Sbjct: 929 DPVKQQQLEIRQKAIKLTANSMYGCLGFSSSRFHAKAIAALITKTGRETLLKTKDIAENK 988
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
L + V+YGDTDS+MI+ + + K+G+++K E N+ YK LE++IDG++K +LLLKKK
Sbjct: 989 LGFNVVYGDTDSIMINSGTTNIEEALKMGHRLKQEVNQHYKCLEIEIDGLFKSLLLLKKK 1048
Query: 836 KYAALSISK-LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
KYAAL + +S + +E KG+D+VRRDW LA AG FV+ QIL Q D L
Sbjct: 1049 KYAALKVENFMSPDRKTIIKECKGLDMVRRDWCALAKNAGDFVLDQILSGQQREDIVL-- 1106
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ EH+ + + N +PL I KQ+T+A EY D KALPHV VALRL N K
Sbjct: 1107 ---TLTEHLSNLGQRMKNNQIPLKEYVINKQITRALSEYHDTKALPHVAVALRLKN-QGK 1162
Query: 955 KLKQGDTISYIIC--EDGTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ I Y+IC +D S+ +++AY+ +E L + K+++DV++Y++QQI P+++RL+
Sbjct: 1163 SEADLNFIPYVICTEQDKKSQFLSEKAYHPDEVLTSKGKIQLDVDWYITQQILPIISRLI 1222
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEE----------NILGVGEAEEVKYQF 1061
E IEG +A IA+C G+D Y+ SIQ+S + IL ++K +
Sbjct: 1223 EHIEGIEADFIAQCFGIDPKKYK--YTSSIQKSNDINDDTAHIKKAILSEETENKLKQRS 1280
Query: 1062 CDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQD 1121
+ C + +Q E P +G + L C P+C V ++ N+++
Sbjct: 1281 IAYLKVVCFSCHLEQ----EFPGVFQKNGTISGL-VCQKPDCGVKFSD--QYIQNRVTLF 1333
Query: 1122 MNKYIVKYYEG 1132
M + + YYEG
Sbjct: 1334 MKQLLNLYYEG 1344
Score = 109 bits (273), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 20/261 (7%)
Query: 319 VESVSSAVELSTSPPPQVVEKKEHKCA---EWEAIQTEPSTSEPQVHSRTAD-DSLPLAT 374
+ + S L S Q+ + ++ K A EW+ I+ + + + + DS PL
Sbjct: 253 MNNTSYQTALDHSVVQQIDQVEQEKMAIDEEWQLIKEQNEQMKVMTAASSESVDSYPLPV 312
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP-- 432
+ + + F F+ DA E+ V+LFGKV+ E + SC + V + R +Y LP
Sbjct: 313 NKDKELAF--FWFDAHEE--NMGLDVFLFGKVYQPELKQYVSCSLKVNGMQRIVYALPKV 368
Query: 433 -----RSEHLKTKEPVSIAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSE 485
R+E K +E +++SE D I I +K + ++KYAF +P +
Sbjct: 369 SKNKSRAELTKEEEQEMALKIFSELDGIRKNKFPSISQWKCKVAKRKYAFEMPIHHGEHQ 428
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF---P 542
L+++Y + P LP++L+G TF +F T+ S LE LLL++KIKGP W+ ++
Sbjct: 429 LLKIKYDSTMPPLPANLTGSTFECLFNTQQSMLELLLLKQKIKGPCWITLKNVQQITQAS 488
Query: 543 SRISWCKYEVQCNQMEKIRIT 563
++ SWCK+++ + + I IT
Sbjct: 489 NKRSWCKHDLVISSPKDIVIT 509
>gi|27413232|gb|AAG52947.1| type I DNA polymerase alpha [Urostyla grandis]
Length = 1356
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 255/611 (41%), Positives = 367/611 (60%), Gaps = 57/611 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-YGKNKKEGEETGEAN--- 616
++T++ GN+ R+L R+ERNE LLLH F+ K Y+ PDK + K+KK+ E+ N
Sbjct: 752 QLTSIAGNLWYRSLQNARAERNEMLLLHEFYGKKYLCPDKAPFSKDKKQFEDYENENLFG 811
Query: 617 ----KG--KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---P 667
KG K RKKA YSGGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ P
Sbjct: 812 NEEVKGNNKKRKKAQYSGGLVIEPKAGFYDTIILLLDFNSLYPSIIQEYNLCFTTVNRRP 871
Query: 668 VRMLQDSDITTLCEYLPEHQV---DTG------ILPSEIKKLVESRRQVKALMKQPNLSS 718
+ +SDI + + + +V D G ILP+ +K LV+ R+ VK +K+ +
Sbjct: 872 SKNYDNSDIKSKQDENIDDEVELPDKGNTYKDAILPNVLKNLVQKRKIVKEQLKK---ET 928
Query: 719 DLL--MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN- 775
D + Q +IRQKA+KLTANSMYGCLGF +SRF A+ +AAL+T GRE LL TK + EN
Sbjct: 929 DPVKQQQLEIRQKAIKLTANSMYGCLGFSSSRFHAKAIAALITKTGRETLLKTKDIAENK 988
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
L + V+YGDTDS+MI+ + + K+G+++K E N+ YK LE++IDG++K +LLLKKK
Sbjct: 989 LGFNVVYGDTDSIMINSGTTNIEEALKMGHRLKQEVNQHYKCLEIEIDGLFKSLLLLKKK 1048
Query: 836 KYAALSISK-LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
KYAAL + +S + +E KG+D+VRRDW LA AG FV+ QIL Q D L
Sbjct: 1049 KYAALKVENFMSPDRKTIIKECKGLDMVRRDWCALAKNAGDFVLDQILSGQQREDIVL-- 1106
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ EH+ + + N +PL I KQ+T+A EY D KALPHV VALRL N K
Sbjct: 1107 ---TLTEHLSNLGQRMKNNQIPLKEYVINKQITRALSEYHDTKALPHVAVALRLKN-QGK 1162
Query: 955 KLKQGDTISYIIC--EDGTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ I Y+IC +D S+ +++AY+ +E L + K+++DV++Y++QQI P+++RL+
Sbjct: 1163 SEADLNFIPYVICTEQDKKSQFLSEKAYHPDEVLTSKGKIQLDVDWYITQQILPIISRLI 1222
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEE----------NILGVGEAEEVKYQF 1061
E IEG +A IA+C G+D Y+ SIQ+S + IL ++K +
Sbjct: 1223 EHIEGIEADFIAQCFGIDPKKYK--YTSSIQKSNDINDDTAHIKKAILSEETENKLKQRS 1280
Query: 1062 CDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQD 1121
+ C + +Q E P +G + L C P+C V ++ N+++
Sbjct: 1281 IAYLKVVCFSCHLEQ----EFPGVFQKNGTISGL-VCQKPDCGVKFSD--QYIQNRVTLF 1333
Query: 1122 MNKYIVKYYEG 1132
M + + YYEG
Sbjct: 1334 MKQLLNLYYEG 1344
Score = 109 bits (273), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 20/261 (7%)
Query: 319 VESVSSAVELSTSPPPQVVEKKEHKCA---EWEAIQTEPSTSEPQVHSRTAD-DSLPLAT 374
+ + S L S Q+ + ++ K A EW+ I+ + + + + DS PL
Sbjct: 253 MNNTSYQTALDHSVVQQIDQVEQEKMAIDEEWQLIKEQNEQMKVMTAASSESVDSYPLPV 312
Query: 375 DHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP-- 432
+ + + F F+ DA E+ V+LFGKV+ E + SC + V + R +Y LP
Sbjct: 313 NKDKELAF--FWFDAHEE--NMGLDVFLFGKVYQPELKQYVSCSLKVNGMQRIVYALPKV 368
Query: 433 -----RSEHLKTKEPVSIAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSE 485
R+E K +E +++SE D I I +K + ++KYAF +P +
Sbjct: 369 SKNKSRAELTKEEEQEMALKIFSELDGIRKNKFPSISQWKCKVAKRKYAFEMPIHHGEHQ 428
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF---P 542
L+++Y + P LP++L+G TF +F T+ S LE LLL++KIKGP W+ ++
Sbjct: 429 LLKIKYDSTMPPLPANLTGSTFECLFNTQQSMLELLLLKQKIKGPCWITLKNVQQITQAS 488
Query: 543 SRISWCKYEVQCNQMEKIRIT 563
++ SWCK+++ + + I IT
Sbjct: 489 NKRSWCKHDLVISSPKDIVIT 509
Score = 42.4 bits (98), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 37 VGTQKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADEN--VYEEVSEKEYT 94
+ Q GR ++ DK K A + K + K ++ DE+ ++EE+ +EY
Sbjct: 1 MSKQTTSSGRVIKKVSDK--KQDALAQFKAAREGKEKRTEQYKGDEHKKIFEEIDAEEYD 58
Query: 95 ERVLKRQEDDWIDDDGGDGYVEDGREIFD 123
+R+ DD+I DD G GY E G EI+D
Sbjct: 59 ALYDQRENDDFIVDDDGIGYKEKGGEIWD 87
>gi|397575369|gb|EJK49658.1| hypothetical protein THAOC_31441 [Thalassiosira oceanica]
Length = 1287
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 245/679 (36%), Positives = 380/679 (55%), Gaps = 63/679 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN+ + T+ G RS+R E++LLH FH+ Y+LP+K ++E EA G
Sbjct: 580 QLTNIAGNLWNSTIKGNRSQRAEYILLHEFHKMGYLLPEKLTASQRRE-----EAGCSGG 634
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+K Y+G V EP KG ++ F+++MD+ SL ++IQEYN+CFTT+ + D
Sbjct: 635 KK--GYAGAEVFEPSKGLHESFVLVMDYESLSAALIQEYNLCFTTMDWTDKNNGDQEHSL 692
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
LP D G+LP ++ LV RR +K LM+ + SD Q +IRQ ALK+TA S+YG
Sbjct: 693 PTLPAESQDRGVLPKVVEALVVQRRNLKELMRS-EVDSDKKEQLNIRQLALKITACSVYG 751
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNVN---D 796
CLG+ + RF+A+P+AAL+ GR+ L+ TK + EN + EVIYGDTDS+MI+ ++ D
Sbjct: 752 CLGYDSFRFYAEPIAALLAQLGRQTLVRTKDIAENTMGLEVIYGDTDSIMINTRISRLID 811
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
Y V ++G+ +KSE NKLYK+LEL++D +++ ML+L+KKKYAAL+IS+ G + +E+
Sbjct: 812 YSKVKELGDSVKSEVNKLYKKLELEVDAIFRSMLILEKKKYAALTISEGPGGLLKFGKEL 871
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
KG+D+VRRDW + E+GK+V+ QIL + D QNIH+H++ + + G +
Sbjct: 872 KGLDLVRRDWCIQSRESGKYVVDQILSSEER-----DVVFQNIHDHLELLSEKMRYGELS 926
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG------ 970
+ ITK L K P EY + +LPHVQVA R+ N K + GD I YII E
Sbjct: 927 IGNYVITKGLNKHPNEY--KSSLPHVQVARRMLK-NHKAVGIGDHIPYIITESNKIVEKS 983
Query: 971 -------TSEAATQRAYNIEEL-KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
S+ ++RAY+ +E+ ++ KL+ D+++Y + QI P + RL +P+ G +
Sbjct: 984 DNVTATKMSKNLSERAYHPDEVERSERKLRPDIDWYWNNQIIPPILRLCKPLGGVLPEIL 1043
Query: 1023 AECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKY--QFCDKFEFTCMNPSCKQVNTV 1080
+ GLD+ + + +I ++ ENI+ + + +F D +FT + SCK +
Sbjct: 1044 DKNPGLDSFNLYNSVSGTITKT-ENIIKCAPEQHLSRMERFSDVDKFTVLCSSCKTESEF 1102
Query: 1081 EAPTRLSTHG----VVFVLD--ECINPECKVPP----------YTYLPHLINKLSQDMNK 1124
RL T +F C NP C P + +L+ K+ QD +
Sbjct: 1103 PGSFRLVTENSGSDTIFCQSGFSCPNPMCPSPDNWGEADLFSCACKILNLVRKVKQDAQR 1162
Query: 1125 YIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLC--TTCHKYKLHRVYTELQLYQQLSFFH 1182
KYY+G +C++P C TR+ + T+ C TC L ++ E L QL +
Sbjct: 1163 ---KYYDGLARCDNPLCDLETRQ--VFSSTQCCPRATCDG-SLKAIHNESWLQTQLKYLD 1216
Query: 1183 YICDITKALTK--SDTPSI 1199
+ DI A + S PS+
Sbjct: 1217 SLFDIAHAKKRMLSSCPSL 1235
>gi|154335031|ref|XP_001563762.1| putative DNA polymerase I alpha catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060784|emb|CAM37799.1| putative DNA polymerase I alpha catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1341
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/480 (43%), Positives = 304/480 (63%), Gaps = 27/480 (5%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ K G + E + G
Sbjct: 672 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQDFKRGRDDDEED---G 727
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 728 KRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRSEIDVPPPE 787
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 788 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDANNLAL-LEIRQKAL 846
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIYGDTDSLM 789
KLTANSMYGCLGF SRF AQPLA LVT +GR L +T L+ LN VIYGDTDS+M
Sbjct: 847 KLTANSMYGCLGFEYSRFHAQPLAELVTRQGRLALQSTVDLIPQLNPSLRVIYGDTDSVM 906
Query: 790 ISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
I + ND +V +G +K++ NK Y+ LE+DIDGV++ +LLLKKKKYAAL+++ +
Sbjct: 907 IQTGIKNDIKAVRDLGLDLKAKINKRYQSLEIDIDGVFRAILLLKKKKYAALTVTDWQDE 966
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
+E+KG+D+VRRDW L+ V+S++L+ + +D L + +M+ +
Sbjct: 967 GKTYKKEVKGLDMVRRDWCPLSKRVSDSVLSRVLNAEGS-----EDILDYVMNYMRDVAG 1021
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE 968
+ NG L I+K LTK PE Y + PH VALR+ + ++ GD I Y+IC
Sbjct: 1022 QVRNGCYTLDDFVISKSLTKEPEAYRG-NSFPHATVALRMKQ-RKELVRVGDLIPYVIC- 1078
Query: 969 DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
T + + +A+++EE++ NS+L ID +YLS QI+P V RL E I+G V+++E +G+
Sbjct: 1079 --TGDRLSDKAFHVEEVRQNSELHIDSEWYLSAQIYPPVMRLCEHIQGFSNVQLSEAMGI 1136
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 384 MFFLDAFEDIYK---QPGTVYLFGKVFVKENN--SHSSCCVIVQNIDRKIYLLPRSEHLK 438
++ DA E + PG+++LFGK+ +++N S+ SCCV V+N+ R I+LLPR L+
Sbjct: 245 FYWFDAREQPHTLSVDPGSLFLFGKMVMEKNGRTSYPSCCVRVRNMYRSIFLLPREGSLQ 304
Query: 439 TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPA 497
V E + I I + + +E+ YAF PGVP + + + ++RY + P
Sbjct: 305 E-------DVVKEINDICRNQGIEQRRIKFVERYYAFEEPGVPYEKTRWAKLRYPGRYPP 357
Query: 498 LPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQM 557
L + + G SS LE L++RK+KGPS+L S IS C E +
Sbjct: 358 LNAKGPLRHIQTIMGASSSLLELFLIKRKLKGPSFLRISGLAASASHISHCTLEFSVDSP 417
Query: 558 EKIRI 562
+ +R+
Sbjct: 418 KNLRV 422
>gi|37681580|gb|AAQ97671.1| DNA polymerase alpha [Paraurostyla weissei]
Length = 1496
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 271/722 (37%), Positives = 404/722 (55%), Gaps = 70/722 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE------GEETGE 614
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ N K+ GE+ E
Sbjct: 790 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKQFILPDKK-ASNAKDFKRNLVGEDFEE 848
Query: 615 A----NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---P 667
A KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ P
Sbjct: 849 AEPTGKKGGKRKKAQYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRRP 908
Query: 668 VRMLQDSDITTLCEY-----------LPEHQVDT--GILPSEIKKLVESRRQVKALMKQP 714
+ S+I + LP+ V+ +LP+ ++ LV+ R+ VK MK
Sbjct: 909 TKNFDGSEIKNQFKVGEEDEEVEESSLPDKNVNIKDAVLPNVLRDLVQKRKAVKEKMKNE 968
Query: 715 NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE 774
S L Q +IRQKA+KLTANSMYGCLGF +SRF A+ +AAL+T GRE LL TK + E
Sbjct: 969 K-DSVKLQQLEIRQKAIKLTANSMYGCLGFGSSRFHAKAIAALITRTGRETLLRTKDIAE 1027
Query: 775 N-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
N L + V+YGDTDS+MI+ N ++G ++K E N+LYK LE++IDGV+K +LLLK
Sbjct: 1028 NKLGFNVVYGDTDSIMINTGSNQLQQSLEMGKRLKVEVNQLYKCLEIEIDGVFKSLLLLK 1087
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD--YS 891
KKKYAAL ++ QE+KG+D+VRRDW L+ G +V+ QIL + + +
Sbjct: 1088 KKKYAALKYEGFGTPEVKVVQEMKGLDMVRRDWCPLSKTVGNYVLGQILSGKQREEVVLN 1147
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
L++ L +I + MK R LD ITKQLT+ EY+D K PHV VA RL N
Sbjct: 1148 LNEYLSDIGDKMKTNRITLDQYI-------ITKQLTRQISEYSDIKGQPHVMVAQRLKNL 1200
Query: 952 N-SKKLKQGDTISYIICEDGTS--EAATQ------RAYNIEE-LKNNSKLKIDVNYYLSQ 1001
S+ + I Y+I G S E + Q +AY+ +E L + K+ ID+++Y++Q
Sbjct: 1201 GKSEADLVNNFIPYVI---GVSPFEPSKQNPQLADKAYHPDEVLSSKGKVLIDIDWYITQ 1257
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--------SQIKESIQQSEENILGVGE 1053
QI P +TRL+E I+G D +A+CLG+D Y+ + + + + IL
Sbjct: 1258 QILPPITRLIEHIDGIDVEFVAQCLGVDPKKYKYHSEKKRDDNVGDDMGNVQNPILQTET 1317
Query: 1054 AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH 1113
+ +K + + + C P C++ + P + G CI + K+P +
Sbjct: 1318 EKSLKNRSIAELKVKC--PFCQEF--FDFPG-VYQEGKEITGMNCIKCQQKIPE----QY 1368
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQ 1173
++N+++ + + + YY G C +P C +R+ + K + TC K K+ Y+E Q
Sbjct: 1369 IMNRINLFVKQLMTLYYSGNYDCLEPSCKAKSRQLLVNNKC-INLTC-KGKMVPEYSEHQ 1426
Query: 1174 LYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKL 1233
L + + ++ K + +S D + Y ++++ V+ + S+YN VDL +
Sbjct: 1427 TNDTLRYLQGLFNVKKCIHESKKQMEIKDVPYFQQYQQLQERVDEVMNRSSYNKVDLGSI 1486
Query: 1234 FS 1235
FS
Sbjct: 1487 FS 1488
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 133/567 (23%), Positives = 251/567 (44%), Gaps = 72/567 (12%)
Query: 40 QKMEGGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERV 97
Q GR ++ K+ A +L+ + G K ++ DE ++EE+ +Y +
Sbjct: 5 QHTSSGREIKKVGKKSGVSGALAQLRAAREGGDKRTDQYQVDEAKRIFEEIDADDYEKIQ 64
Query: 98 LKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKL 157
+R+ DD+I DD G GY + G EI++ + KE K+K+ K +PN + +
Sbjct: 65 NQRRNDDFIVDDDGYGYRDFGGEIWE-----ATEGKEDGGKKKRRK--LDPNEQHITNFM 117
Query: 158 LANMPVKKKK---KEEVQLN---------NDDVLADLLSEVNTTIAPTLKLNTKTNEIVI 205
+ ++KKK + VQ+N + D++ +LL E++ A L+ + ++
Sbjct: 118 MPMTTIQKKKNLGQGVVQINQKPKVSAAQSKDIMDNLLQELDNKDADELE-DINAGAVIA 176
Query: 206 PKEEPPAPTAKEYLA---NFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAE 262
+P A +E L N + K E ++ I+++ +++ SN + ++
Sbjct: 177 ELNKPIAFNKEEQLYSKYNLTLETKQEVMKQQIIEQQMPVGQNQSNSNPFSKKRKLEEIS 236
Query: 263 QSKEEPVDDGLWEQMQID---------DWDNSQQTQDVLPEQAKVELQIEAIESQSIEEK 313
Q++ P +Q D D ++Q Q+ + I+S+ I ++
Sbjct: 237 QTQPAPRQSQTSSNLQRDQKSGNTSYFDAQSNQSLNQSSNFQSAFDDSKMLIDSKPIXQE 296
Query: 314 VDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTS------EPQVHSRTAD 367
D + ++ + + + EW ++ + S +P + D
Sbjct: 297 NDHQEXQLINQNLNMKQND-------------EWNQLKQQNSAHNDYNQIDPNAALKAQD 343
Query: 368 DSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRK 427
LPL D +++DA E+ +Y+FGK++ E + SC + V + R+
Sbjct: 344 YPLPLNQDG----TLSFYWIDAHEE--NNGADLYIFGKIYQPEVKQYVSCSLKVNGMQRE 397
Query: 428 IYLLP------RSEHLKTKEPVSIAQVYSEFDQIATQ--YKILDFKSRKIEKKYAFNLPG 479
IY LP R K +E + V E D I + I ++ + + KKYAF +P
Sbjct: 398 IYALPKMKGKARGTLTKEEESQQVRSVQLELDDIRKKRFANITKWRCKPVTKKYAFEMPI 457
Query: 480 VPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
+L+++Y + P+LPS+L+G+TF +FG S LE +++RKIKGP W+ +
Sbjct: 458 QHGEHLFLKMKYDSTMPSLPSNLTGNTFECLFGANQSMLELFIIKRKIKGPCWMTVKNPK 517
Query: 540 K---FPSRISWCKYEVQCNQMEKIRIT 563
K FP +WC+ E+ + + + +T
Sbjct: 518 KVIDFPK--TWCRQEITVDDPKFVEVT 542
>gi|291001623|ref|XP_002683378.1| DNA polymerase alpha catalytic subunit [Naegleria gruberi]
gi|284097007|gb|EFC50634.1| DNA polymerase alpha catalytic subunit [Naegleria gruberi]
Length = 1206
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 241/621 (38%), Positives = 344/621 (55%), Gaps = 73/621 (11%)
Query: 551 EVQCNQMEKI-------RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG 603
+V + MEK+ +TN GN+ +RTL+G RSER E+LLLH F+++ Y+LPDK
Sbjct: 497 QVSMDLMEKLSLIPLTKELTNAAGNLWNRTLIGSRSERIEYLLLHEFYKQKYILPDKSRA 556
Query: 604 KNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
K+ G +K YSGGLVL+PK GF+ +++L+DFNSLYPSII E NICF
Sbjct: 557 FGKRGG------------RKPKYSGGLVLDPKSGFHHNYVLLLDFNSLYPSIILENNICF 604
Query: 664 TTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
S+ E EH+ D +LP I+ L+ RRQ + M+Q + Q
Sbjct: 605 ----------SNFLYTEEEREEHKNDKTVLPLVIETLLSRRRQAQRQMEQA--TGVQRWQ 652
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIY 782
YD+RQ+ALKLTANS YGCLGF SRFF + +A +T +GR IL TK L+EN L + VIY
Sbjct: 653 YDMRQRALKLTANSTYGCLGFTFSRFFCKQMAESITVEGRNILTQTKQLIENSLRFSVIY 712
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK----QLELDIDGVYKYMLLLKKKKYA 838
GDTDS+MI+ + +YD G +IK E N ++ +LE+DIDG+++ MLLL+KKKY
Sbjct: 713 GDTDSVMIATDTTNYDEALSKGEEIKKEINNSFRKGKGKLEIDIDGLFRRMLLLRKKKYG 772
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL----DD 894
AL +K G +I E+KG+D+VRRDW L+ +++I QIL D ++
Sbjct: 773 ALIHTKNKQGTIIPKLELKGLDMVRRDWCDLSRNVSQYIIDQILRPNEPVDCQTQPTPEE 832
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ NIH H+++I D+ N VPL +T LTK PE+YTD PHVQVAL + N +
Sbjct: 833 IVANIHTHLREIADDVRNNRVPLEQYILTTALTKEPEQYTDAINHPHVQVALEMRR-NGQ 891
Query: 955 KLKQGDTISYIIC--EDGTSEA-ATQRAYNIEELKNNSK---LKIDVNYYLSQQIHPVVT 1008
++ I ++I +DGTS + ++RA + + + K L++D +YL+QQ+ P V+
Sbjct: 892 AVRLHQRIPFVITLRKDGTSSSKVSERAVHPDTFRAEQKDNNLELDYEWYLAQQVFPPVS 951
Query: 1009 RLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFE-- 1066
RL E ++ TD IAECLGL+ +R+ + E IL E D+FE
Sbjct: 952 RLCEYLQQTDKALIAECLGLEKKYFRTSYGDDDNMEEYKILSRQEE-------YDEFEGI 1004
Query: 1067 -----FTCMNPSCK-------QVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHL 1114
FTC + S K + + T + +LD C P CK T +
Sbjct: 1005 ELPVNFTCDHCSNKVNLDLVSTLTNAISTTDTDMMQSITILD-C--PHCKSRMST--NKI 1059
Query: 1115 INKLSQDMNKYIVKYYEGWLK 1135
+N ++ + I KYY LK
Sbjct: 1060 VNLSQLNIRELIKKYYSNELK 1080
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 377 ENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR--- 433
E K +F+D+ E G + LFGK+ NN ++SCCV ++ + + IY LPR
Sbjct: 84 EGKSKLDFYFVDSCE----LDGRIILFGKIETLPNN-YASCCVRLEKVQKTIYFLPREPI 138
Query: 434 -SEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP---DLSEYLEV 489
++ + ++ I + SE +I+ + FK E+KY F VP ++ V
Sbjct: 139 EAKLVNQEQESRIQEELSEVLKISPEKFGFKFK----ERKYIFEDADVPYNKSITMVKVV 194
Query: 490 RYSAKC--PALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRIS 546
+ K P L FS VF +S LE +L+RK+ GPSWL + K ++S
Sbjct: 195 IFDVKNLKPHLQEFRGSKLFSKVFHATTSGLEEFILKRKLMGPSWLSIQKFHVKSSGQLS 254
Query: 547 WCKYEVQCNQMEKIRITN 564
WCK+EV ++ I + N
Sbjct: 255 WCKFEVSTDEPTNISVIN 272
>gi|29251556|gb|AAO73537.1| DNA polymerase catalytic subunit alpha [Stylonychia lemnae]
Length = 1524
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 267/727 (36%), Positives = 395/727 (54%), Gaps = 73/727 (10%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E
Sbjct: 801 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDLRRGFMGDEYEEN 860
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
+ G KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R
Sbjct: 861 DTKGGGKKGGKRKKAKYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 920
Query: 670 MLQDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALM 711
++ D + L LP+ V+ +LP ++ LV+ R+ VK M
Sbjct: 921 PTKNYDGSELKNQXKSADNAEGDEVEDVDLPDKNVNIKDAVLPXVLRDLVQKRKAVKEKM 980
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
K L Q +IRQKA+KLTANSMYGCLGF +SRF A +AAL+T GRE LL TK
Sbjct: 981 KN-EXDQXKLQQLEIRQKAIKLTANSMYGCLGFSSSRFHASAIAALITKTGRETLLRTKD 1039
Query: 772 LVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYML 830
+ EN L + V+YG TDS+MI+ N ++G ++K E N LYK LE++IDG +K +L
Sbjct: 1040 IAENKLGFNVVYGXTDSIMINTGTNQLQQSLEMGKKLKVEVNCLYKCLEIEIDGXFKSLL 1099
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD- 889
LLKKKKYA L + + ++ QE+KG+D+VRR W L+ G +V+SQIL + D
Sbjct: 1100 LLKKKKYAXLRYEGVGSNEVKVIQEMKGLDMVRRXWCPLSKSIGNYVLSQILSGKQXEDV 1159
Query: 890 -YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
++L++ L +I E MK R LD F+ ITKQLT+A EY+D K PHV VA RL
Sbjct: 1160 VFNLNEYLSDIGEKMKSNRITLDQ-FI------ITKQLTRAISEYSDIKGQPHVAVAQRL 1212
Query: 949 NNTN-SKKLKQGDTISYIICEDGTSEAATQ-----RAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I A + +AY+ +E L + K+ +D+++Y+
Sbjct: 1213 KNQGKSEADLVNNFIPYVIGAQAFDTAKSNPQLSDKAYHPDELLSSKGKITLDIDWYIXT 1272
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR--------SQIKESIQQSEENILGVGE 1053
QI +TRL+E I+G + +A+CLG+D Y+ +I + + IL
Sbjct: 1273 QILXPITRLIEHIDGINIEFVAQCLGVDPKKYKYHSEKKNTDEIGDDGGSIQNPILQTET 1332
Query: 1054 AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPH 1113
+ +K++ + + C PSC + + P V L C K+P +
Sbjct: 1333 EKSLKHRSIAELKVKC--PSC--THNYDFPGIYQEGKDVSGLI-CTKCNAKIPE----KY 1383
Query: 1114 LINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCT--TCHKYKLHRVYTE 1171
++N+++ + + + YY+G +C++P C +TR+ L C TC K K+ Y+E
Sbjct: 1384 VMNRVNLFLKQLLALYYQGKYECQEPSCKSMTRQL---LYHNKCVNLTC-KGKMVPEYSE 1439
Query: 1172 LQLYQQLSFFHYICDITKAL---TKSDTPSIKFDSETYMGYCKMKQHVERFLESSAYNIV 1228
Q L + + I K L +K+D+ ++ D Y Y ++ V+ + S Y V
Sbjct: 1440 HQTNXTLRYLQGLFXIKKHLHEDSKNDSLKVETDIPFYNEYNVLQTKVDELMNRSKYTKV 1499
Query: 1229 DLKKLFS 1235
DL +F
Sbjct: 1500 DLGSIFG 1506
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 252/544 (46%), Gaps = 55/544 (10%)
Query: 60 AFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVED 117
A +L+ + G K ++ +E ++EE+ EY +R+ DD+I D G GY +
Sbjct: 25 ALAQLRAAREGGDKRTDQYQVEEAKRIFEEIDADEYERIXDQRKNDDFIVXDDGXGYRDH 84
Query: 118 GREIFD-DDIEDVPQKKEKHDKRKKNKNIQN---PNA---KGDIQKLLANMPVKKKKKEE 170
G EI++ DD E+V KK+K ++I B P + K +N+ +K+K K
Sbjct: 85 GGEIWERDDNEEVGGKKKKRKLDPNEQHITBFMMPASTIRKNKGXGNSSNIQIKQKPKVT 144
Query: 171 VQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEK 230
+ + D++ +LL E++ L+ + + ++ +P A E L N + +E
Sbjct: 145 AE-QSMDIMNNLLQELDNKDVDELE-DVNASAVMAELNKPIAFXKNEELLN-KYGVTLES 201
Query: 231 KIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQI----DDWDNSQ 286
K E +K++ + + ++ + + N SK+ +D+ +Q QI + S+
Sbjct: 202 KQEIQVKRQLE----QQQXEQTIGQHQQNANVFSKKRKLDE--IQQPQIKKEHQGLNKSR 255
Query: 287 QTQDVLPEQAKVEL-----QIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKE 341
QT+ ++ + + Q+ +S + VD + + SSA + + + P K +
Sbjct: 256 QTETIIHQSSNTSYFDAKSQLSHDQSMEYQSAVDDSKMSESSSAQKNAMNEGPIAFSKNQ 315
Query: 342 -----HKCAEWEAIQTEPSTSEPQ---VHSRTADD----SLPLATDHENKKVFRMFFLDA 389
K EW I+ + + + + ++A D +LPL D +++DA
Sbjct: 316 TNMSASKNDEWAQIKHQNQQAHQEFKTMEQKSAMDIQEFALPLNQDGS----LSFYWIDA 371
Query: 390 FEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVS----- 444
+ +++FGK++ E N + SC + V + R+IY LP+ + K + ++
Sbjct: 372 HGE--NNGADLFIFGKIYQPEINQYVSCSMKVNGMQREIYALPKMQKGKARGTLTREEEN 429
Query: 445 --IAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
+ V E + I + I ++ + + +KYAF + +L+++Y A LPS
Sbjct: 430 QLVRGVQLELEDIRKKRFQGITKWRCKPVTRKYAFEMLIQHGEHLFLKIKYDATFIPLPS 489
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWCKYEVQCNQMEK 559
+ G+TF +FG+ S LE +L+RKIKGP W+ +K + +WC+ E++ + +
Sbjct: 490 TVQGNTFECLFGSNQSMLELFILKRKIKGPCWMTIKNPKKVTDFKKTWCRQEIEIDNPKN 549
Query: 560 IRIT 563
+T
Sbjct: 550 AEVT 553
>gi|401418706|ref|XP_003873844.1| DNA polymerase I alpha catalytic subunit,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322490076|emb|CBZ25338.1| DNA polymerase I alpha catalytic subunit,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1340
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/483 (44%), Positives = 307/483 (63%), Gaps = 32/483 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ K G + E GK
Sbjct: 670 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQDFKRGRDDDEEEDGK- 727
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
+KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 728 -RKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRSEIDVPPPE 786
Query: 677 -----TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+ E L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 787 NLICASCAAEGLSAPCLHKSVLPKVIKSLVDSRREVKRLMKTEKDANNLAL-LEIRQKAL 845
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIYGDTDSLM 789
KLTANSMYGCLGF +SRF AQPLA LVT +GR L +T L+ LN VIYGDTDS+M
Sbjct: 846 KLTANSMYGCLGFEHSRFHAQPLAELVTRQGRLALQSTVDLIPQLNPSLRVIYGDTDSVM 905
Query: 790 ISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
I + ND +V +G +K++ NK Y+ LE+DIDGV++ +LLLKKKKYAAL+++
Sbjct: 906 IQTGIKNDIKAVRDLGLDLKAKINKRYQSLEIDIDGVFRAILLLKKKKYAALTVTDWQGE 965
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS---YTDYSLDDRLQNIHEHMKK 905
+E+KG+D+VRRDW L+ V+S++L+ + DY + + ++++ E ++
Sbjct: 966 GKTYKKEVKGLDMVRRDWCPLSKCVCDAVLSRVLNAEGSEDILDYVM-NYMRDVAEQVRA 1024
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
R LDN FV I+K LTK PE Y + PH VALR+ + ++ GD I Y+
Sbjct: 1025 GRYTLDN-FV------ISKSLTKEPEAYRG-NSFPHATVALRMKQ-RKELVRVGDLIPYV 1075
Query: 966 ICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAEC 1025
IC T + + +A+++EE++ NS+L ID +YLS QI+P V RL E I+G +++E
Sbjct: 1076 IC---TGDRLSDKAFHVEEVRQNSQLHIDSEWYLSVQIYPPVMRLCEHIQGFSNAQLSEA 1132
Query: 1026 LGL 1028
+G+
Sbjct: 1133 MGI 1135
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 176/389 (45%), Gaps = 58/389 (14%)
Query: 210 PPAPTAKEYLANFSKPIKVEKKIEKPI---KKEPSPLKDEIKSNDSVMEVE--------- 257
P P+AK K KK+ KP+ K P P + + + S M++E
Sbjct: 54 PQLPSAK----------KAGKKLRKPLSGAKPTPKPKQQTLAQSMSDMDMERLLKRYRID 103
Query: 258 --MNVAEQ-------SKEEPVDDGLWEQ---MQIDDWDNSQQTQDVLPEQAKVELQIEAI 305
+VAE DDG EQ + D++ + +P + V+ + E+
Sbjct: 104 EDADVAEDIGVSHLLQPHSDSDDGGDEQEATLTADEFLARLARAEAVPAASIVKEKRESG 163
Query: 306 ESQSIEEKVDVT-NVESVSSAVELSTSPPPQVVEKKEHKCAEW--EAIQTEPSTSEPQVH 362
E ++ D + N E SA L P P + ++ E +AI+ + +
Sbjct: 164 EKTTVVALKDESFNFERDRSAKPLRPKPTPGAGDGAGYRNEETPKQAIELAATLAPQTDA 223
Query: 363 SRTADDSLPLATDHENKKVFRMFFLDAFEDIYK---QPGTVYLFGKVFVKENN--SHSSC 417
++ ++P ++ + +F ++ DA E + PG+++LFGK+ V++N S+ SC
Sbjct: 224 AQFVSPAVPYKSEEMTEGLF--YWFDAREQPHTLSVDPGSLFLFGKMAVEKNGRTSYLSC 281
Query: 418 CVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNL 477
CV V+N+ R I++LP++ S V E + I I + + +E+ YAF +
Sbjct: 282 CVRVRNMYRSIFVLPKAGS-------SQQDVVKEINDICRNQGIEQRRIKFVERYYAFEV 334
Query: 478 PGVP-DLSEYLEVRYSAKCPALPSDLSGDTFSHVF---GTKSSFLENLLLERKIKGPSWL 533
PGVP + +++ ++RY + P L + F H+ G SS LE L++RK+KGP++L
Sbjct: 335 PGVPHEKTQWAKLRYPGRYPPLNAK---GPFRHILIIMGASSSLLELFLIKRKLKGPNFL 391
Query: 534 EFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
+RIS C E + +R+
Sbjct: 392 RISGLVASANRISHCALEFSVESPKNLRV 420
>gi|403341362|gb|EJY69984.1| DNA polymerase alpha catalytic subunit [Oxytricha trifallax]
Length = 1517
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 261/728 (35%), Positives = 390/728 (53%), Gaps = 69/728 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ + +E
Sbjct: 798 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKAPNAKDFKRNMFADEFEEA 857
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--- 666
E KG RKKAAY+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+
Sbjct: 858 EVGKGPKKGGKRKKAAYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 917
Query: 667 PVRMLQDSDITTLCEY---------------LPEHQVDT--GILPSEIKKLVESRRQVKA 709
P + S++ + + LP+ V+ +LP+ ++ LV+ R+ VK
Sbjct: 918 PTKNFDGSEVKSQFKAAGTDANEGNEVEEADLPDKNVNVKDAVLPNVLRDLVQKRKAVKE 977
Query: 710 LMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNT 769
MK + L Q +IRQKA+KLTANSMYGCLGF +SRF AQ +AAL+T GR+ LL T
Sbjct: 978 KMKNEK-DAVKLSQLEIRQKAIKLTANSMYGCLGFGSSRFHAQAIAALITKTGRDTLLRT 1036
Query: 770 KSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
K + EN L + V+YGDTDS+MI+ N ++G ++K+E N LYK LE++IDGV+K
Sbjct: 1037 KDIAENKLGFNVVYGDTDSIMINTGTNQLQQSLEMGKRLKAEVNCLYKCLEIEIDGVFKS 1096
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
+LLLKKKKYAAL QE+KG+D+VRRDW L+ G FV++QIL +
Sbjct: 1097 LLLLKKKKYAALKYEGFGTPDAKVVQEVKGLDMVRRDWCPLSKNVGNFVLNQILSGKQRE 1156
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
D L N++E++ I + N + L ITKQLTKA EY+D K PHV VA RL
Sbjct: 1157 DVVL-----NLNEYLSDIGEKMKNNGITLDQFIITKQLTKAISEYSDIKGQPHVAVAQRL 1211
Query: 949 NNTN-SKKLKQGDTISYIICE-----DGTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I T+ A +AY+ EE + + K+ +D+ +Y++
Sbjct: 1212 KNQGKSESDLVNNFIPYVIGAQPFDPSKTNPALADKAYHPEEVVSSKGKILLDIEWYITM 1271
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEEN---------ILGVG 1052
Q+ P +TRL+E I+G D +A+CLG+D Y+ E N IL
Sbjct: 1272 QVLPPITRLIEHIDGIDVEFVAQCLGVDPKKYKYHSSEKKTGETNNDDGTLIQNPILQTE 1331
Query: 1053 EAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVP-PYTYL 1111
+K + + C P C + + P + G L + +C P P Y+
Sbjct: 1332 TERSLKGRTIAELTIKC--PHCSE--SYHFPG-IFQDGKNNALSGLLCIKCTQPIPEAYI 1386
Query: 1112 PHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTE 1171
N+++ + + + YY+G +C++P C ++R+ L + K K+ YTE
Sbjct: 1387 Q---NRVTLFLKQLLTLYYQGNKQCQEPACGAVSRQ--LLYNNKCINLACKGKMIPEYTE 1441
Query: 1172 LQLYQQLSFFHYICDITKALTKSDTPSIKFDS----ETYMGYCKMKQHVERFLESSAYNI 1227
+ L + + ++ K + ++ + + + +M+ V+ + S YN
Sbjct: 1442 QKTNDTLRYLQGLFNVKKYIQENQKNGCVHKTVEEVPNFDAFARMQGKVDDIMIRSKYNK 1501
Query: 1228 VDLKKLFS 1235
VDL +F+
Sbjct: 1502 VDLSSIFN 1509
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 132/543 (24%), Positives = 249/543 (45%), Gaps = 55/543 (10%)
Query: 59 AAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVE 116
A +L+ + G K ++ DE +++E+ + EY + +R+ DD+I DD G GY +
Sbjct: 24 GALAQLRAAREGGSKRTDQYQVDEAKKIFDEIDDDEYDKIQDQRKNDDFIVDDDGYGYRD 83
Query: 117 DGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNA----KGDIQK--LLANMPVKKKKKEE 170
G EI++ D D P+ K KRK + N Q+ A K I + + N + K+K +
Sbjct: 84 HGGEIWERD--DHPEDGGKKKKRKLDPNEQSITAFMKPKSTINRPGAVTNSSAQIKQKPK 141
Query: 171 VQL-NNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLAN-FSKPIKV 228
V + D++ +L E+++ L+ + + +V +P A + L + ++ ++
Sbjct: 142 VSAEQSKDIMNNLFQELDSKDVDELQ-DVNNSAVVTELNKPIAFNQNDMLTSKYAVTLET 200
Query: 229 EKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDNSQQT 288
+++E+ E + +I N + +++ K E + + D S QT
Sbjct: 201 RQEVEQKRVTEQIQAQAQIGQN---QQSSNPFSKKRKFEEISTN-QNALASDSKRVSNQT 256
Query: 289 QDVLPEQAKVELQIEAIESQSIEE-----------KVDVTNVESVSSAVELSTSPPPQVV 337
D L + +A S+S+ + K+D T+ + + +E T + +
Sbjct: 257 NDNLNKSGNTSY-FDAKSSESLNQSDFQSAMDDSMKIDQTSAQK-KTQIE-QTVNHSKTL 313
Query: 338 EKKEHKCAEWEAIQT-------EPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAF 390
E + EW ++ E EP V T + LPL +EN +++DA
Sbjct: 314 ETQSKSNDEWNQVRQQNFQANQELRNMEPSVGQNTQEFPLPL---NENG-TLSFYWIDAH 369
Query: 391 EDIYKQPGT-VYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP------RSEHLKTKEPV 443
E+ GT +Y+FGK++ + SC + V + R++Y LP R +E
Sbjct: 370 EE---NNGTDLYIFGKIYQPQVRQFVSCSMKVNGMQRELYALPKMRGKARGALTVEEEKE 426
Query: 444 SIAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD 501
+ V E D I + +I ++ + + +KYAF +P ++L+++Y + P LPS
Sbjct: 427 QVRAVMMELDDIRKKRFPQISKWRCKPVNRKYAFEMPIQHGEHQFLKIKYDSTMPPLPST 486
Query: 502 LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWCKYEVQCNQMEKI 560
+ G+TF +FG+ S LE +L+RKI+GP W+ K + +WC+ E+ + + +
Sbjct: 487 IQGNTFECIFGSTQSMLELFILKRKIRGPCWMTIKNPTKVTDFKKTWCRQEIVIDNPKNV 546
Query: 561 RIT 563
+T
Sbjct: 547 EVT 549
>gi|157867365|ref|XP_001682237.1| putative DNA polymerase I alpha catalytic subunit [Leishmania major
strain Friedlin]
gi|68125689|emb|CAJ04158.1| putative DNA polymerase I alpha catalytic subunit [Leishmania major
strain Friedlin]
Length = 1339
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/483 (44%), Positives = 309/483 (63%), Gaps = 33/483 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ K G + E + G
Sbjct: 670 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQDFKRGHDDEEED---G 725
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 726 KRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRSEIDVPPPE 785
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 786 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDANNLAL-LEIRQKAL 844
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIYGDTDSLM 789
KLTANSMYGCLGF SRF AQPLA LVT +GR L +T L+ LN VIYGDTDS+M
Sbjct: 845 KLTANSMYGCLGFEYSRFHAQPLAELVTRQGRLALQSTVDLIPQLNPSLRVIYGDTDSVM 904
Query: 790 ISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
I + ND +V +G ++K++ NK Y+ LE+DIDGV++ +LLLKKKKYAAL+++
Sbjct: 905 IQTGIKNDIKAVRDLGLELKAKINKRYQSLEIDIDGVFRAILLLKKKKYAALTVTDWQGE 964
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS---YTDYSLDDRLQNIHEHMKK 905
+E+KG+D+VRRDW L+ V+S++L+ + DY + + ++++ E ++
Sbjct: 965 GKTYKKEVKGLDMVRRDWCPLSKSVCDSVLSRVLNAEGSEDILDYVM-NYMRDVAEQVRA 1023
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
R LDN FV I+K LTK PE Y + PH VALR+ + ++ GD I Y+
Sbjct: 1024 GRYTLDN-FV------ISKSLTKEPEAYRG-NSFPHATVALRMKQ-RKELVRVGDLIPYV 1074
Query: 966 ICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAEC 1025
IC T + + +A+++EE++ NS+L+ID +YLS QI+P V RL E I+G +++E
Sbjct: 1075 IC---TGDRLSDKAFHVEEVRQNSQLRIDSEWYLSVQIYPPVMRLCEHIQGFSNAQLSEA 1131
Query: 1026 LGL 1028
+G+
Sbjct: 1132 MGI 1134
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 127/255 (49%), Gaps = 23/255 (9%)
Query: 318 NVESVSSAVELSTSPPPQVVEKKEHKCAEW--EAIQTEPSTSEPQVHSRTADDSLPLATD 375
N E SA L P P+ + ++ E +AI+ + + ++ ++P ++
Sbjct: 177 NFERDRSAKPLRPRPNPRAGDGAGYQNEETPKQAIELAATLAPQTDAAQFVSPAVPYKSE 236
Query: 376 HENKKVFRMFFLDAFEDIYK---QPGTVYLFGKVFVKENN--SHSSCCVIVQNIDRKIYL 430
+ +F ++ DA E + PG+++LFGKV V++N S+ SCCV V+N+ R +++
Sbjct: 237 EMTEGLF--YWFDAREQPHTLSVDPGSLFLFGKVAVEKNGRTSYLSCCVRVRNMYRSVFV 294
Query: 431 LPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEV 489
LP++ S V E + I I + + +E+ YAF +PGVP + +++ ++
Sbjct: 295 LPKAGS-------SQQDVVKEINDICRNQGIEQRRIKFVERYYAFEVPGVPHEKTQWAKL 347
Query: 490 RYSAKCPALPSDLSGDTFSHVF---GTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRIS 546
RY + P L + F H+ G SS LE L++RK+KGPS+L P+RIS
Sbjct: 348 RYPGRYPPLNAK---GPFRHILIIMGASSSLLELFLIKRKLKGPSFLRISGLVASPNRIS 404
Query: 547 WCKYEVQCNQMEKIR 561
C E + +R
Sbjct: 405 HCALEFSVESPKNLR 419
>gi|152002407|gb|ABS19604.1| DNA polymerase alpha [Sterkiella histriomuscorum]
Length = 1516
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 260/728 (35%), Positives = 390/728 (53%), Gaps = 69/728 (9%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GB+ R+L R+ERNE LLLH F +K ++LPDK+ + +E
Sbjct: 797 QLTNIAGBLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKAPNAKDFKRNMFADEFEEA 856
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--- 666
E KG RKKAAY+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+
Sbjct: 857 EVGKGPKKGGKRKKAAYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 916
Query: 667 PVRMLQDSDITTLCEY---------------LPEHQVDT--GILPSEIKKLVESRRQVKA 709
P + S++ + + LP+ V+ +LP+ ++ LV+ R+ VK
Sbjct: 917 PTKNFDGSEVKSQFKAAGTDANEGNEVEEADLPDKNVNVKDAVLPNVLRDLVQKRKAVKE 976
Query: 710 LMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNT 769
MK + L Q +IRQKA+KLTANSMYGCLGF +SRF AQ +AAL+T GR+ LL T
Sbjct: 977 KMKNEK-DAVKLSQLEIRQKAIKLTANSMYGCLGFGSSRFHAQAIAALITKTGRDTLLRT 1035
Query: 770 KSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
K + EN L + V+YGDTDS+MI+ N ++G ++K+E N LYK LE++IDGV+K
Sbjct: 1036 KDIAENKLGFNVVYGDTDSIMINTGTNQLQQSLEMGKRLKAEVNCLYKCLEIEIDGVFKS 1095
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
+LLLKKKKYAAL QE+KG+D+VRRDW L+ G FV++QIL +
Sbjct: 1096 LLLLKKKKYAALKYEGFGTPDAKVVQEVKGLDMVRRDWCPLSKNVGNFVLNQILSGKQRE 1155
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
D L N++E++ I + N + L ITKQLTKA EY+D K PHV VA RL
Sbjct: 1156 DVVL-----NLNEYLSDIGEKMKNNGITLDQFIITKQLTKAISEYSDIKGQPHVAVAQRL 1210
Query: 949 NNTN-SKKLKQGDTISYIICE-----DGTSEAATQRAYNIEE-LKNNSKLKIDVNYYLSQ 1001
N S+ + I Y+I T+ A +AY+ EE + + K+ +D+ +Y++
Sbjct: 1211 KNQGKSESDLVNNFIPYVIGAQPFDPSKTNPALADKAYHPEEVVSSKGKILLDIEWYITM 1270
Query: 1002 QIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEEN---------ILGVG 1052
Q+ P +TRL+E I+G D +A+CLG+D Y+ E N IL
Sbjct: 1271 QVLPPITRLIEHIDGIDVEFVAQCLGVDPKKYKYHSSEKKTGETNNDDGTLIQNPILQTE 1330
Query: 1053 EAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVP-PYTYL 1111
+K + + C P C + + P + G L + +C P P Y+
Sbjct: 1331 TERSLKGRTIAELTIKC--PHCSE--SYHFPG-IFQDGKNNTLSGLLCIKCTQPIPEAYI 1385
Query: 1112 PHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTE 1171
N+++ + + + YY+G +C++P C ++R+ L + K K+ YTE
Sbjct: 1386 Q---NRVTLFLKQLLTLYYQGNKQCQEPACGAVSRQ--LLYNNKCINLACKGKMIPEYTE 1440
Query: 1172 LQLYQQLSFFHYICDITKALTKSDTPSIKFDS----ETYMGYCKMKQHVERFLESSAYNI 1227
+ L + + ++ K + ++ + + + +M+ V+ + S YN
Sbjct: 1441 QKTNDTLRYLQGLFNVKKYIQENQKNGCVHKTVEEVPNFDAFARMQGKVDDIMIRSKYNK 1500
Query: 1228 VDLKKLFS 1235
VDL +F+
Sbjct: 1501 VDLSSIFN 1508
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 131/548 (23%), Positives = 247/548 (45%), Gaps = 66/548 (12%)
Query: 59 AAFQKLKDLKGQGVKHKYEFTADE--NVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVE 116
A +L+ + G K ++ DE +++E+ + EY + +R+ DD+I DD G GY +
Sbjct: 24 GALAQLRAAREGGSKRTDQYQVDEAKKIFDEIDDDEYDKIQDQRKNDDFIVDDDGYGYRD 83
Query: 117 DGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNA----KGDIQK--LLANMPVKKKKKEE 170
G EI++ D D P+ K KRK + N Q+ A K I + + N + K+K +
Sbjct: 84 HGGEIWERD--DHPEDGGKKKKRKLDPNEQSITAFMKPKSTINRPGAVTNSSAQIKQKPK 141
Query: 171 VQL-NNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLAN-FSKPIKV 228
V + D++ +L E+++ L+ + + +V +P A + L + ++ ++
Sbjct: 142 VSAEQSKDIMNNLFQELDSKDVDELQ-DVNNSAVVTELNKPIAFNQNDMLTSKYAVTLET 200
Query: 229 EKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDN---- 284
+++E+ E + +I N +QS +E++ + N
Sbjct: 201 RQEVEQKRVTEQIQAQAQIGQN-----------QQSSNPFSKKRKFEEISTNQNANASDS 249
Query: 285 ---SQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKE 341
S QT D L + +A S+S+ + D + S ++ +++ Q+ +
Sbjct: 250 KRVSNQTNDNLNKSGNTSY-FDAKSSESLNQS-DFQSAMDDSMKIDQTSAQKNQIEQTVN 307
Query: 342 HKCA---------EWEAIQT-------EPSTSEPQVHSRTADDSLPLATDHENKKVFRMF 385
H EW ++ E EP V T + LPL +EN +
Sbjct: 308 HSKTLEIQSKSNDEWNQVRQQNFQANQELRNMEPSVGQNTQEFPLPL---NENG-TLSFY 363
Query: 386 FLDAFEDIYKQPGT-VYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP------RSEHLK 438
++DA E+ GT +Y+FGK++ + SC + V + R++Y LP R
Sbjct: 364 WIDAHEE---NNGTDLYIFGKIYQPQMRQFVSCSMKVNGMQRELYALPKMRGKARGALTV 420
Query: 439 TKEPVSIAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP 496
+E + V E D I + +I ++ + + +KYAF +P ++L+++Y + P
Sbjct: 421 EEEKQQVRAVMMELDDIRKKRFPQISKWRCKPVNRKYAFEMPIQHGEHQFLKIKYDSTMP 480
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWCKYEVQCN 555
LPS + G+TF +FG+ S LE +L+RKI+GP W+ K + +WC+ E+ +
Sbjct: 481 PLPSTIQGNTFECIFGSTQSMLELFILKRKIRGPCWMTIKNPTKVTDFKKTWCRQEIVID 540
Query: 556 QMEKIRIT 563
+ + +T
Sbjct: 541 NPKNVEVT 548
>gi|407863071|gb|EKG07865.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1335
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/487 (43%), Positives = 302/487 (62%), Gaps = 39/487 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLHAFH+ +V PDK+ K+ ++ + K
Sbjct: 665 RLTTLAGNLWSRTLYGARSERIEYLLLHAFHDLKFVTPDKKRFDGKRGRQDLEDETK--- 721
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------------P 667
+K Y GG+VLEPK G Y +I+L+DFNSLYPS+IQE+NIC+TTI P
Sbjct: 722 -RKTKYQGGMVLEPKSGLYSDYILLLDFNSLYPSLIQEFNICYTTIERDENTVSAEIPPP 780
Query: 668 VRMLQDSDITTLCEY--LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
R+ I T C LP +LP I+ LVESRR++K LMK S+L +
Sbjct: 781 ERL-----ICTSCAAAGLPSPCSHKCVLPKVIRGLVESRREIKRLMKTEKDPSNL-ATLE 834
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIYG 783
IRQK+LKLTANSMYGCLGF +SRF+AQPLA LVT +GR L NT L+ ++ VIYG
Sbjct: 835 IRQKSLKLTANSMYGCLGFEHSRFYAQPLAELVTRQGRIALQNTVELIPQISPLLRVIYG 894
Query: 784 DTDSLMISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
DTDS+MI + +D V ++G +IK++ N+ Y+ LELDIDGV++ MLLLKKKKYAALS+
Sbjct: 895 DTDSVMIQTGIKDDISKVRELGFEIKNKVNQRYQSLELDIDGVFRAMLLLKKKKYAALSV 954
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ +E+KG+D+VRRDW L+ + + V+S++L+ ++ +D L + H
Sbjct: 955 VDWQSDGKTYKKEVKGLDMVRRDWCPLSQKVSEAVLSRVLNAEAG-----EDILDYVMTH 1009
Query: 903 MKKIRTDLDNG-FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
MK + + G + L I+K LTK PE Y A PH VALR+ + ++ GD
Sbjct: 1010 MKTVADHVRAGNYYGLEDFVISKSLTKEPESYRG-TAFPHAAVALRMKQ-RKENVRVGDL 1067
Query: 962 ISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
I Y+ICE E +AY+++E++ ++IDV +YLS Q++P V RL E I+G +
Sbjct: 1068 IPYVICE---GEHLNDKAYHVDEVRRTKGIRIDVEWYLSSQLYPPVMRLCEHIQGFSPEQ 1124
Query: 1022 IAECLGL 1028
++E +G+
Sbjct: 1125 LSEVMGV 1131
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Query: 384 MFFLDAFEDIY--KQPGTVYLFGKVFVK--ENNSHSSCCVIVQNIDRKIYLLPRSEHLKT 439
++ DA E + +PGT++LFGK + K E S SSCCV V+N+ R +LLPR
Sbjct: 239 FYWFDAKEQPHTLSEPGTIFLFGKFYEKKREKLSFSSCCVHVKNVYRCTFLLPR------ 292
Query: 440 KEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPAL 498
E S ++ E + + ++ I + + R +E+ YAF PG+ + + + ++ + K P
Sbjct: 293 -EGSSDTEIIKEINDVCQKHGIGERRIRFVERYYAFEEPGIRREKNRWAKLLFPGKYPGF 351
Query: 499 PSDLSGDTFSH---VFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCN 555
P + G+ F H V G S +E L+++K+ GPS+L R+S C+ E +
Sbjct: 352 P--IMGE-FKHIRAVMGASRSLIELFLIKKKLMGPSYLSMENFFPATDRLSHCELEFVVD 408
Query: 556 QMEKIRI 562
+ I++
Sbjct: 409 SPKNIKV 415
>gi|6015009|sp|O00874.1|DPOLA_LEIDO RecName: Full=DNA polymerase alpha catalytic subunit
gi|2138288|gb|AAC47538.1| DNA polymerase alpha catalytic subunit [Leishmania donovani]
Length = 1339
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/483 (44%), Positives = 307/483 (63%), Gaps = 32/483 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y +N K G + E GK
Sbjct: 670 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQNFKRGRDDEEEEDGK- 727
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
+KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 728 -RKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRESGSEIDVPPPE 786
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 787 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKIEKDANNLAL-LEIRQKAL 845
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIYGDTDSLM 789
KLTANSMYGCLGF SRF AQPLA LVT +GR L +T L+ LN VIYGDTDS+M
Sbjct: 846 KLTANSMYGCLGFEYSRFHAQPLAELVTRQGRLALQSTVDLIPQLNPSLRVIYGDTDSVM 905
Query: 790 ISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
I + ND +V +G +K++ NK Y+ LE+DIDGV++ +LLLKKKKYAAL+++
Sbjct: 906 IQTGIKNDIKAVRDLGLDLKAKINKRYQSLEIDIDGVFRAILLLKKKKYAALTVTDWQGE 965
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS---YTDYSLDDRLQNIHEHMKK 905
+E+KG+D+VRRDW L+ V+S++L+ + DY + + ++++ E ++
Sbjct: 966 GKTYKKEVKGLDMVRRDWCPLSKCVCDSVLSRVLNAEGSEDILDYVM-NYMRDVSEKVRA 1024
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
R LDN FV I+K LTK PE Y + PH VALR+ + ++ GD I Y+
Sbjct: 1025 GRYTLDN-FV------ISKSLTKEPEAYRG-NSFPHATVALRMKQ-RKELVRVGDLIPYV 1075
Query: 966 ICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAEC 1025
IC T + + +A+++EE++ NS+L+ID +YLS QI+P V RL E I+G +++E
Sbjct: 1076 IC---TGDRLSDKAFHVEEVRQNSQLQIDSEWYLSVQIYPPVMRLCEHIQGFSNAQLSEA 1132
Query: 1026 LGL 1028
+G+
Sbjct: 1133 MGI 1135
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 126/260 (48%), Gaps = 23/260 (8%)
Query: 313 KVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEW--EAIQTEPSTSEPQVHSRTADDSL 370
K ++ NVE SA P P ++ E +AI+ + + ++ ++
Sbjct: 172 KDELFNVERDQSAKPPRPRPTPGAGGGAGYRNEETPKQAIELTATLAPQMDAAQFVSPAV 231
Query: 371 PLATDHENKKVFRMFFLDAFEDIYK---QPGTVYLFGKVFVKENN--SHSSCCVIVQNID 425
P + + +F ++ DA E + PG+++LFGK+ V++N S+ SCCV V+N+
Sbjct: 232 PYKSGEMTEGLF--YWFDAREQPHTLSVDPGSLFLFGKMAVEKNGRTSYLSCCVRVRNMY 289
Query: 426 RKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLS 484
R +++LP++ S V E + I I + + +E+ YAF +PGVP + +
Sbjct: 290 RSVFVLPKAGS-------SQEDVVKEINDICRNQGIEQRRIKFVERYYAFEVPGVPHEKT 342
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVF---GTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
++ ++RY + P L + F H+ G SS LE L++RK+KGPS+L
Sbjct: 343 QWAKLRYPGRYPPLNAK---GPFRHILIIMGASSSLLELFLIKRKLKGPSFLRISGLVAS 399
Query: 542 PSRISWCKYEVQCNQMEKIR 561
+RIS C E + +R
Sbjct: 400 ANRISHCALEFSVESPKNLR 419
>gi|71661998|ref|XP_818012.1| DNA polymerase I alpha catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70883238|gb|EAN96161.1| DNA polymerase I alpha catalytic subunit, putative [Trypanosoma
cruzi]
Length = 1335
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/599 (38%), Positives = 345/599 (57%), Gaps = 53/599 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLHAFH+ +V PDK+ K+ ++ + K
Sbjct: 665 RLTTLAGNLWSRTLYGARSERIEYLLLHAFHDLKFVTPDKKRFDGKRGRQDLEDETK--- 721
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------------P 667
+K Y GG+VLEPK G Y +I+L+DFNSLYPS+IQE+NIC+TTI P
Sbjct: 722 -RKTKYQGGMVLEPKSGLYSDYILLLDFNSLYPSLIQEFNICYTTIERDENTVSAEIPPP 780
Query: 668 VRMLQDSDITTLCEY--LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
R+ I T C LP +LP I+ LVESRR++K LMK ++L +
Sbjct: 781 ERL-----ICTSCAAAGLPSPCSHKCVLPKVIRGLVESRREIKRLMKTEKDPNNL-ATLE 834
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIYG 783
IRQ++LKLTANSMYGCLGF +SRF+AQPLA LVT +GR L NT L+ ++ VIYG
Sbjct: 835 IRQRSLKLTANSMYGCLGFEHSRFYAQPLAELVTRQGRIALQNTVELIPQISPLLRVIYG 894
Query: 784 DTDSLMISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
DTDS+MI + +D V ++G +IK++ N+ Y+ LELDIDGV++ MLLLKKKKYAALS+
Sbjct: 895 DTDSVMIQTGIKDDIRKVRELGFEIKNKVNQRYQSLELDIDGVFRAMLLLKKKKYAALSV 954
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
N +E+KG+D+VRRDW L+ + + V+S++L+ ++ +D L + H
Sbjct: 955 VDWQNDGKTYKKEVKGLDMVRRDWCPLSQKVSEAVLSRVLNAEAG-----EDILDYVMTH 1009
Query: 903 MKKIRTDLDNG-FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
MK + + G + L I+K LTK PE Y A PH VALR+ + ++ GD
Sbjct: 1010 MKTVSDHVRAGNYYGLEDFVISKSLTKEPESYRG-TAFPHAAVALRMKQ-RKENVRVGDL 1067
Query: 962 ISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
I Y+ICE E +AY+++E++ ++IDV +YLS Q++P V RL E I+G +
Sbjct: 1068 IPYVICE---GEHLNDKAYHVDEVRRTKGIRIDVEWYLSSQLYPPVMRLCEHIQGFSPEQ 1124
Query: 1022 IAECLGLDTSL-YRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQV--- 1077
++E +G+ + +I+E++ + + + ++ ++ F C QV
Sbjct: 1125 LSEAMGVACHVRTEREIQETLIVDDFSHCSLFKSRDLSECFPTAVPLQVQCTRCHQVVPI 1184
Query: 1078 ------NTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYY 1130
N + + ++ S F L C+N + + +L N L+Q +K I ++Y
Sbjct: 1185 DPHKYINDMFSASKTSFPNEPFELYNCVNCGQSLS----VTYLANCLTQMCHKIIQQFY 1239
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 26/191 (13%)
Query: 384 MFFLDAFEDIY--KQPGTVYLFGKVFVK--ENNSHSSCCVIVQNIDRKIYLLPRSEHLKT 439
++ DA E + +PGT++LFGK + K E S SSCCV V+N+ R +LLPR
Sbjct: 239 FYWFDAKEQPHTLSEPGTIFLFGKFYEKKREKVSFSSCCVRVKNVYRCTFLLPR------ 292
Query: 440 KEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPAL 498
E S ++ E + + ++ I + + R +E+ YAF PG+ + + + ++R+ K P
Sbjct: 293 -EGSSDTEIIKEINDVCQKHGIGERRIRFVERYYAFEEPGIRREKNRWAKLRFPGKYPGF 351
Query: 499 PSDLSGDTFSH---VFGTKSSFLENLLLERKIKGPSWLE----FPEAEKFPSRISWCKYE 551
P + G+ F H V G S +E L+++K+ GPS+L FP E R+S C+ E
Sbjct: 352 P--IMGE-FKHIRAVMGASRSLIELFLIKKKLMGPSYLSMENFFPATE----RLSHCELE 404
Query: 552 VQCNQMEKIRI 562
+ + I++
Sbjct: 405 FVVDSPKNIKV 415
>gi|398013311|ref|XP_003859848.1| DNA polymerase I alpha catalytic subunit, putative [Leishmania
donovani]
gi|322498065|emb|CBZ33141.1| DNA polymerase I alpha catalytic subunit, putative [Leishmania
donovani]
Length = 1340
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/483 (44%), Positives = 307/483 (63%), Gaps = 32/483 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y +N K G + E GK
Sbjct: 670 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQNFKRGRDDEEEEDGK- 727
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
+KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 728 -RKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRESGSEIDVPPPE 786
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 787 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKIEKDANNLAL-LEIRQKAL 845
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIYGDTDSLM 789
KLTANSMYGCLGF SRF AQPLA LVT +GR L +T L+ LN VIYGDTDS+M
Sbjct: 846 KLTANSMYGCLGFEYSRFHAQPLAELVTRQGRLALQSTVDLIPQLNPSLRVIYGDTDSVM 905
Query: 790 ISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
I + ND +V +G +K++ NK Y+ LE+DIDGV++ +LLLKKKKYAAL+++
Sbjct: 906 IQTGIKNDIKAVRDLGLDLKAKINKRYQSLEIDIDGVFRAILLLKKKKYAALTVTDWQGE 965
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS---YTDYSLDDRLQNIHEHMKK 905
+E+KG+D+VRRDW L+ V+S++L+ + DY + + ++++ E ++
Sbjct: 966 GKTYKKEVKGLDMVRRDWCPLSKCVCDSVLSRVLNAEGSEDILDYVM-NYMRDVSEKVRA 1024
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
R LDN FV I+K LTK PE Y + PH VALR+ + ++ GD I Y+
Sbjct: 1025 GRYTLDN-FV------ISKSLTKEPEAYRG-NSFPHATVALRMKQ-RKELVRVGDLIPYV 1075
Query: 966 ICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAEC 1025
IC T + + +A+++EE++ NS+L+ID +YLS QI+P V RL E I+G +++E
Sbjct: 1076 IC---TGDRLSDKAFHVEEVRQNSQLQIDSEWYLSVQIYPPVMRLCEHIQGFSNAQLSEA 1132
Query: 1026 LGL 1028
+G+
Sbjct: 1133 MGI 1135
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 126/260 (48%), Gaps = 23/260 (8%)
Query: 313 KVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEW--EAIQTEPSTSEPQVHSRTADDSL 370
K ++ NVE SA P P ++ E +AI+ + + ++ ++
Sbjct: 172 KDELFNVERDQSAKPPRPRPTPGAGGGAGYRNEETPKQAIELTATLAPQMDAAQFVSPAV 231
Query: 371 PLATDHENKKVFRMFFLDAFEDIYK---QPGTVYLFGKVFVKENN--SHSSCCVIVQNID 425
P + + +F ++ DA E + PG+++LFGK+ V++N S+ SCCV V+N+
Sbjct: 232 PYKSGEMTEGLF--YWFDAREQPHTLSVDPGSLFLFGKMAVEKNGRTSYLSCCVRVRNMY 289
Query: 426 RKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLS 484
R +++LP++ S V E + I I + + +E+ YAF +PGVP + +
Sbjct: 290 RSVFVLPKAGS-------SQEDVVKEINDICRNQGIEQRRIKFVERYYAFEVPGVPHEKT 342
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVF---GTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
++ ++RY + P L + F H+ G SS LE L++RK+KGPS+L
Sbjct: 343 QWAKLRYPGRYPPLNAK---GPFRHILIIMGASSSLLELFLIKRKLKGPSFLRISGLVAS 399
Query: 542 PSRISWCKYEVQCNQMEKIR 561
+RIS C E + +R
Sbjct: 400 ANRISHCALEFSVESPKNLR 419
>gi|146082971|ref|XP_001464643.1| putative DNA polymerase I alpha catalytic subunit [Leishmania
infantum JPCM5]
gi|134068736|emb|CAM67041.1| putative DNA polymerase I alpha catalytic subunit [Leishmania
infantum JPCM5]
Length = 1340
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/483 (44%), Positives = 307/483 (63%), Gaps = 32/483 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y +N K G + E GK
Sbjct: 670 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQNFKRGRDDEEEEDGK- 727
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
+KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 728 -RKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRESGSEIDVPPPE 786
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 787 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKIEKDANNLAL-LEIRQKAL 845
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIYGDTDSLM 789
KLTANSMYGCLGF SRF AQPLA LVT +GR L +T L+ LN VIYGDTDS+M
Sbjct: 846 KLTANSMYGCLGFEYSRFHAQPLAELVTRQGRLALQSTVDLIPQLNPSLRVIYGDTDSVM 905
Query: 790 ISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
I + ND +V +G +K++ NK Y+ LE+DIDGV++ +LLLKKKKYAAL+++
Sbjct: 906 IQTGIKNDIKAVRDLGLDLKAKINKRYQSLEIDIDGVFRAILLLKKKKYAALTVTDWQGE 965
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS---YTDYSLDDRLQNIHEHMKK 905
+E+KG+D+VRRDW L+ V+S++L+ + DY + + ++++ E ++
Sbjct: 966 GKTYKKEVKGLDMVRRDWCPLSKCVCDSVLSRVLNAEGSEDILDYVM-NYMRDVSEKVRA 1024
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
R LDN FV I+K LTK PE Y + PH VALR+ + ++ GD I Y+
Sbjct: 1025 GRYTLDN-FV------ISKSLTKEPEAYRG-NSFPHATVALRMKQ-RKELVRVGDLIPYV 1075
Query: 966 ICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAEC 1025
IC T + + +A+++EE++ NS+L+ID +YLS QI+P V RL E I+G +++E
Sbjct: 1076 IC---TGDRLSDKAFHVEEVRQNSQLQIDSEWYLSVQIYPPVMRLCEHIQGFSNAQLSEA 1132
Query: 1026 LGL 1028
+G+
Sbjct: 1133 MGI 1135
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 113/217 (52%), Gaps = 22/217 (10%)
Query: 355 STSEPQV-HSRTADDSLPLATDHENKKVFRMFFLDAFEDIYK---QPGTVYLFGKVFVKE 410
+T PQ+ ++ ++P + + +F ++ DA E + PG+++LFGK+ V++
Sbjct: 215 ATLAPQMDAAQFVSPAVPYKSGEMTEGLF--YWFDAREQPHTLSVDPGSLFLFGKMAVEK 272
Query: 411 NN--SHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRK 468
N S+ SCCV V+N+ R +++LP++ S V E + I I + +
Sbjct: 273 NGRTSYLSCCVRVRNMYRSVFVLPKAGS-------SQEDVVKEINDICRNQGIEQRRIKF 325
Query: 469 IEKKYAFNLPGVP-DLSEYLEVRYSAKCPALPSDLSGDTFSHVF---GTKSSFLENLLLE 524
+E+ YAF +PGVP + +++ ++RY + P L + F H+ G SS LE L++
Sbjct: 326 VERYYAFEVPGVPHEKTQWAKLRYPGRYPPLNAK---GPFRHILIIMGASSSLLELFLIK 382
Query: 525 RKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
RK+KGPS+L +RIS C E + + +R
Sbjct: 383 RKLKGPSFLRISGLVASANRISHCALEFSVDSPKNLR 419
>gi|302852093|ref|XP_002957568.1| hypothetical protein VOLCADRAFT_107737 [Volvox carteri f.
nagariensis]
gi|300257085|gb|EFJ41338.1| hypothetical protein VOLCADRAFT_107737 [Volvox carteri f.
nagariensis]
Length = 1606
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 255/739 (34%), Positives = 372/739 (50%), Gaps = 85/739 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
+++ + G + SRTL G R++R E LLLH FH + ++ PDKQ K+K+ ++ EA++
Sbjct: 844 QLSVLSGQLWSRTLAGQRAQRIEMLLLHEFHGRKFITPDKQTYKDKQRKQQA-EADEYDD 902
Query: 621 RKKAA-------------------------------YSGGLVLEPKKGFYDKFIILMDFN 649
YSGGLVLEPKKG YDK +I++DFN
Sbjct: 903 AGGDDDGEDDAGGGKKGKKGKKGSASAAAAKSNGPKYSGGLVLEPKKGLYDKIVIILDFN 962
Query: 650 SLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKA 709
SLYPSIIQEYNICFTT V QD + L + LP+ ++ LV R+QVKA
Sbjct: 963 SLYPSIIQEYNICFTT--VSRPQDGSLPALPNPATAAK-GLAPLPAVLQSLVNRRKQVKA 1019
Query: 710 LMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNT 769
M + Q +RQ+A+KLTANSMYGCLGF SRF+AQPLA L+TA+GR IL +T
Sbjct: 1020 AMSS-ERNPLTRQQLQVRQQAIKLTANSMYGCLGFGASRFYAQPLAELITAQGRSILSST 1078
Query: 770 KSLVE-NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
LV+ ++ EVIYGDTDS+M++ + + + ++G +IK E NK YK LE+++DG+++
Sbjct: 1079 VDLVQGSIGAEVIYGDTDSIMVATHSDSVEEARELGAKIKKEVNKRYKLLEIELDGIFRS 1138
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
+LLLKKKKYAA+ + GK++ E KG+D+VRRDW L+ + G F +S IL +
Sbjct: 1139 ILLLKKKKYAAMKLELEPGGKVVQVMEQKGLDIVRRDWCPLSKDEGNFALSAIL-----S 1193
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNG---FVPLTLLEITKQLTKAPEEYTDRKALPHVQVA 945
+ ++ + IH H+++ L G VP + K+ T
Sbjct: 1194 GGNREEVVAEIHNHLRQTAEKLRAGQGETVPYIICVERKRDDATAAAATADGPAAAEGAP 1253
Query: 946 LRLNNTNSKKLKQGDTISYI-ICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIH 1004
+ G+ S G S + +RA ++EEL++N L++DV YYL+QQIH
Sbjct: 1254 APAAANPAPATTGGNGTSAANGGGTGCSGSLAERARHLEELRDNPSLEVDVEYYLAQQIH 1313
Query: 1005 PVVTRLLEPIEGTDAVRIAECLGLDTSLYR------SQIKESIQQSEENILGVGEA---- 1054
PVV+RL+ IEGTDA IA+CLGLD + YR E++ L VG +
Sbjct: 1314 PVVSRLVSHIEGTDAAHIADCLGLDPTKYRGTSGAGGSGGFGGGGDEDSGLMVGSSMGTL 1373
Query: 1055 --EEVKYQFCDKFEFTCMNPSCKQVNTVEAPTR---LSTHGVVFVLDECINPECKVPPYT 1109
EE ++ C N S + V+A R L H ++ LD + +V
Sbjct: 1374 MDEEDNFRSCSPLMLNSPNGSSFPLRGVDAVLRGEVLPDH-LLTPLDALGDDTARV---- 1428
Query: 1110 YLPHLINKLSQDMNKYIVKYYEGWLKCED------PGCSDLTRRCPLGLKTRLCTTCHKY 1163
L L+N++ ++ + +YY+G L+ +D GC R P G + CH Y
Sbjct: 1429 GLAGLVNQVLLRAHEAVARYYDGVLRPDDETAEVAGGCRAAVLRVP-GGGSGGTALCHYY 1487
Query: 1164 KLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDS----ETYMGYCKMKQHVERF 1219
+L L+ + + C I A KS + + V+
Sbjct: 1488 RL--------LHVEGAVRRQYCRIRAADPKSQIAMEDLRALIPEPLSRTLASAAEAVDSI 1539
Query: 1220 LESSAYNIVDLKKLFSCEE 1238
S ++ VDL KLF C E
Sbjct: 1540 RRCSHWHWVDLGKLFGCLE 1558
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 41/239 (17%)
Query: 354 PSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNS 413
P +S P S +LPL ++ V + LDA+E+ +PG V LFGKV +
Sbjct: 336 PDSSTPG--SAPGPGTLPL----DSNGVMPFYMLDAYENPDVRPGEVLLFGKV--ESEGR 387
Query: 414 HSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQ-------------------------V 448
SC V V+ + R + ++PR E + + SIA+ V
Sbjct: 388 WLSCAVSVRGLQRCLLVVPRPEVFEDVD-GSIARLEAAVKEDPSRRVELIKLLQERCSSV 446
Query: 449 YSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALPSDL----S 503
E + T+ + + +++ YAF + VP ++ ++VRY A P + S S
Sbjct: 447 REEVRGLLTRAGVGSMRMVPVKRSYAFEVKDVPHGEQWVIKVRYPAHMPTVQSPTGGPPS 506
Query: 504 GDTFSHVFGTKSSFLENLLLERKIKGPSWLEF--PEAEKFPSRISWCKYEVQCNQMEKI 560
G TF +FG + S LE L L+R+IKGP WL P+ ++ ++ +WCK EV + +K+
Sbjct: 507 GRTFVAIFGAQQSCLEALQLKRRIKGPGWLGVFQPQRIEYGNQATWCKVEVVVDSAKKL 565
>gi|402594858|gb|EJW88784.1| DNA polymerase [Wuchereria bancrofti]
Length = 1034
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 229/529 (43%), Positives = 310/529 (58%), Gaps = 83/529 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK----EGEETGEA 615
I+IT + G VLSRT++GGR+ERNE+LLLHAF++ YV P+K +KK E ++T A
Sbjct: 487 IQITKIVGGVLSRTMLGGRAERNEYLLLHAFNKAGYVAPNKYQPDSKKRKQSELKDTRSA 546
Query: 616 -------NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV 668
NK +K Y+GGLVL+PK G YD FI+L+DFNSLYPSIIQEYNICFTT+ +
Sbjct: 547 DNHPEDYNKILQNRKGQYAGGLVLDPKMGLYDTFILLLDFNSLYPSIIQEYNICFTTVDM 606
Query: 669 RMLQDSDITTLCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ +PE DT GILP EI+ LVE RR VK +MK L+ QYDI
Sbjct: 607 SKKDKNE-------MPELPSDTNEGILPREIRSLVERRRDVKRMMKSEKLTEQQRQQYDI 659
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
RQ LKLTANSMYGCLGF SRF+A+PLAAL+TA+GREIL++TK LVE Y VIYGDTD
Sbjct: 660 RQMGLKLTANSMYGCLGFQQSRFYAKPLAALITAQGREILMHTKDLVEKNGYSVIYGDTD 719
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
S+MI+ ++ +SE Q LDI ++ Y+ + + ++
Sbjct: 720 SVMINTGFSE-----------RSEL-----QHGLDI----------VRRDYSFI-VKQIG 752
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
N EI +D++ SQ E +I QI RLQ K+
Sbjct: 753 N-------EI--LDIILSVQSQNRDE----IIEQI-----------HSRLQ-------KL 781
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
+ ++ + ++ +I KQLT+ P+EYT+ PH VA RLN T K +GDT+ YII
Sbjct: 782 KEEISQELLENSMFQIFKQLTRNPDEYTNINIQPHAVVAQRLNATGKFKFHRGDTVGYII 841
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
CEDG+ ++ATQRAY++ E++ N+ L+ID +YYL QQI PVV+RL PIE + +A+ L
Sbjct: 842 CEDGSGKSATQRAYHLTEVQENN-LRIDFHYYLVQQILPVVSRLCVPIEECNEAWVAQAL 900
Query: 1027 GLDTSLY-RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSC 1074
GLD+ Y + + E EE +L + C+ F+F C N C
Sbjct: 901 GLDSMAYEKHGVYEENVDREEQLLCFSYH---SLERCESFKFVCPNDGC 946
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 130/238 (54%), Gaps = 20/238 (8%)
Query: 335 QVVEKKEHKCAEWEAIQTEPS----------TSEPQVHSRTADDSLPLATDHENKKVFRM 384
++ K KC E +Q E S +P A + T+ E + V R
Sbjct: 16 ELTNKHSDKCIVKEVVQPETSFIWADRNQMLNEQPMKEGVVATFGSFMRTNSEGEPVLRF 75
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHS-SCCVIVQNIDRKIYLLPRSEHLKTKEPV 443
++LDAFED K PGTVYLFG++ N S S SCCV+V+NI R+ +L+ E + V
Sbjct: 76 YWLDAFEDPIKMPGTVYLFGRLI---NGSISESCCVVVKNIWRQ-HLVNDVE----TDEV 127
Query: 444 SIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLS 503
+ QV E +I + K R EKK+A+N VP ++ LEV+YS P LP DLS
Sbjct: 128 DLMQVNEEVQKILRSMGVKVVKCRPCEKKFAYNDGVVPQSAQVLEVQYSFNDPRLPMDLS 187
Query: 504 GDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIR 561
G+TFSHVF T ++ +E LL+E +KGPSW+E + ++++ K+E + ME+++
Sbjct: 188 GETFSHVFNTTANAMERLLIETGMKGPSWIEISGCDVSSIQVTYVKHEFTVD-MERMK 244
>gi|72393035|ref|XP_847318.1| DNA polymerase alpha catalytic subunit [Trypanosoma brucei TREU927]
gi|62176493|gb|AAX70600.1| DNA polymerase alpha catalytic subunit [Trypanosoma brucei]
gi|70803348|gb|AAZ13252.1| DNA polymerase alpha catalytic subunit [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 1340
Score = 365 bits (936), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 212/492 (43%), Positives = 301/492 (61%), Gaps = 40/492 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLHAFH +V PDK+ K++ + E + +G
Sbjct: 669 RLTLLAGNLWSRTLYGARSERIEYLLLHAFHNLKFVTPDKK----KRDLKRGREDDDDEG 724
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL- 679
++K Y GG+VLEPK G Y ++I+L+DFNSLYPS+IQE+N+C+TTI D D T+
Sbjct: 725 KRKTKYQGGMVLEPKSGLYSEYILLLDFNSLYPSLIQEFNVCYTTI------DRDENTVS 778
Query: 680 -------------CEY--LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
C LP + ILP I+ LV+SRR++K +MK +L M
Sbjct: 779 AEVPPPESLICLSCRAAGLPSPCLHKCILPKVIRGLVDSRREIKRMMKSERDPGNLAM-L 837
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIY 782
+IRQ ALKLTANSMYGCLGF SRF+AQPLA LVT +GR L NT L+ ++ VIY
Sbjct: 838 EIRQLALKLTANSMYGCLGFEYSRFYAQPLAELVTRQGRLALQNTVELIPQISPSIRVIY 897
Query: 783 GDTDSLMISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+MI + +D V +G +IK + N+ Y+ LELDIDGV++ MLLL+KKKYAALS
Sbjct: 898 GDTDSVMIQTGIKDDIGKVRNLGFEIKGKVNQRYQSLELDIDGVFRAMLLLRKKKYAALS 957
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ + +E+KG+D+VRRDW L+ V+ +IL+ + +D L + +
Sbjct: 958 VVDWQGEGKVYKREVKGLDMVRRDWCPLSQHVSDAVLKRILNAEGG-----EDILDFVIK 1012
Query: 902 HMKKIRTDLDNGFV-PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
+MK + D+ +G V PL I+K LTK PE Y PH VALR+ + ++ GD
Sbjct: 1013 YMKGVAQDVRSGNVYPLEEFVISKSLTKEPESYHG-TGYPHAVVALRMKQ-RKEGVRVGD 1070
Query: 961 TISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
I Y+ICE E +AY+I+E++ + L +DV +YLS Q++P V RL E I+G
Sbjct: 1071 LIPYVICEG--DEHIDDKAYHIDEVRRSDGLSVDVEWYLSSQLYPPVMRLCEHIQGFVPE 1128
Query: 1021 RIAECLGLDTSL 1032
+++E + + + +
Sbjct: 1129 QLSEAMCIASHM 1140
Score = 90.5 bits (223), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 384 MFFLDAFEDIYK--QPGTVYLFGKVFV-KENNSHSSCCVIVQNIDRKIYLLPRSEHLKTK 440
++ DA E + PGT+ LFGKV V +E+ SCCV +Q++ R ++LLP K
Sbjct: 244 FYWFDAKEQPHTLTAPGTILLFGKVCVNEEDEEFRSCCVRIQHVHRNVFLLP-------K 296
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALP 499
E + A+V E + I I + + + +E+ YAF PGVP + + + ++ Y + P P
Sbjct: 297 EGSTDAEVVQEINAICRGSGIEERRIKFVERYYAFEEPGVPREKNRWAKLVYPGRYPPFP 356
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEK 559
+ V G S LE L+++++ GPS+LE R+S CK E +
Sbjct: 357 NKGGLTHVQVVVGASRSLLELFLIKKRLMGPSYLEIEHLVTAMDRVSHCKTEFLVPSPKD 416
Query: 560 IRITN 564
I++ N
Sbjct: 417 IKVYN 421
>gi|118834|sp|P27727.1|DPOLA_TRYBB RecName: Full=DNA polymerase alpha catalytic subunit
gi|10501|emb|CAA43287.1| DNA-directed DNA polymerase [Trypanosoma brucei]
Length = 1339
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 212/492 (43%), Positives = 301/492 (61%), Gaps = 40/492 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLHAFH +V PDK+ K++ + E + +G
Sbjct: 668 RLTLLAGNLWSRTLYGARSERIEYLLLHAFHNLKFVTPDKK----KRDLKRGREDDDDEG 723
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL- 679
++K Y GG+VLEPK G Y ++I+L+DFNSLYPS+IQE+N+C+TTI D D T+
Sbjct: 724 KRKTKYQGGMVLEPKSGLYSEYILLLDFNSLYPSLIQEFNVCYTTI------DRDENTVS 777
Query: 680 -------------CEY--LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
C LP + ILP I+ LV+SRR++K +MK +L M
Sbjct: 778 AEVPPPESLICLSCRAAGLPSPCLHKCILPKVIRGLVDSRREIKRMMKSEKDPGNLAM-L 836
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIY 782
+IRQ ALKLTANSMYGCLGF SRF+AQPLA LVT +GR L NT L+ ++ VIY
Sbjct: 837 EIRQLALKLTANSMYGCLGFEYSRFYAQPLAELVTRQGRLALQNTVELIPQISPSIRVIY 896
Query: 783 GDTDSLMISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+MI + +D V +G +IK + N+ Y+ LELDIDGV++ MLLL+KKKYAALS
Sbjct: 897 GDTDSVMIQTGIKDDIVKVRNLGFEIKGKVNQRYQSLELDIDGVFRAMLLLRKKKYAALS 956
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ + +E+KG+D+VRRDW L+ V+ +IL+ + +D L + +
Sbjct: 957 VVDWQGEGKVYKREVKGLDMVRRDWCPLSQHVSDAVLKRILNAEGG-----EDILDFVIK 1011
Query: 902 HMKKIRTDLDNGFV-PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
+MK + D+ +G V PL I+K LTK PE Y PH VALR+ + ++ GD
Sbjct: 1012 YMKGVAQDVRSGNVYPLEEFVISKSLTKEPESYHG-TGYPHAVVALRMKQ-RKEGVRVGD 1069
Query: 961 TISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
I Y+ICE E +AY+I+E++ + L +DV +YLS Q++P V RL E I+G
Sbjct: 1070 LIPYVICEG--DEHIDDKAYHIDEVRRSDGLSVDVEWYLSSQLYPPVMRLCEHIQGFVPE 1127
Query: 1021 RIAECLGLDTSL 1032
+++E + + + +
Sbjct: 1128 QLSEAMCIASHM 1139
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 384 MFFLDAFEDIYK--QPGTVYLFGKVFV-KENNSHSSCCVIVQNIDRKIYLLPRSEHLKTK 440
++ DA E + PGT+ LFGKV + +E+ SCCV +Q++ R ++LLP K
Sbjct: 243 FYWFDAKEQPHTLTAPGTILLFGKVCMNEEDEEFRSCCVRIQHVHRNVFLLP-------K 295
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALP 499
E + A+V E + I I + + + +E+ YAF PGVP + + + ++ Y + P P
Sbjct: 296 EGSTDAEVVQEINAICRGSGIEERRIKFVERYYAFEEPGVPREKNRWAKLVYPGRYPPFP 355
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEK 559
+ V G S LE L+++++ GPS+LE R+S CK E +
Sbjct: 356 NKGGLTHVQVVVGASRSLLELFLIKKRLMGPSYLEIEHLVTAMDRVSHCKTEFLVPSPKD 415
Query: 560 IRITN 564
I++ N
Sbjct: 416 IKVYN 420
>gi|261330543|emb|CBH13527.1| DNA polymerase I, putative [Trypanosoma brucei gambiense DAL972]
Length = 1340
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 212/492 (43%), Positives = 301/492 (61%), Gaps = 40/492 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLHAFH +V PDK+ K++ + E + +G
Sbjct: 669 RLTLLAGNLWSRTLYGARSERIEYLLLHAFHNLKFVTPDKK----KRDLKRGREDDDDEG 724
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL- 679
++K Y GG+VLEPK G Y ++I+L+DFNSLYPS+IQE+N+C+TTI D D T+
Sbjct: 725 KRKTKYQGGMVLEPKSGLYSEYILLLDFNSLYPSLIQEFNVCYTTI------DRDENTVS 778
Query: 680 -------------CEY--LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
C LP + ILP I+ LV+SRR++K +MK +L M
Sbjct: 779 AEVPPPESLICLSCRAAGLPSPCLHKCILPKVIRGLVDSRREIKRMMKSEKDPGNLAM-L 837
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIY 782
+IRQ ALKLTANSMYGCLGF SRF+AQPLA LVT +GR L NT L+ ++ VIY
Sbjct: 838 EIRQLALKLTANSMYGCLGFEYSRFYAQPLAELVTRQGRLALQNTVELIPQISPSIRVIY 897
Query: 783 GDTDSLMISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+MI + +D V +G +IK + N+ Y+ LELDIDGV++ MLLL+KKKYAALS
Sbjct: 898 GDTDSVMIQTGIKDDIVKVRNLGFEIKGKVNQRYQSLELDIDGVFRAMLLLRKKKYAALS 957
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ + +E+KG+D+VRRDW L+ V+ +IL+ + +D L + +
Sbjct: 958 VVDWQGEGKVYKREVKGLDMVRRDWCPLSQHVSDAVLKRILNAEGG-----EDILDFVIK 1012
Query: 902 HMKKIRTDLDNGFV-PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
+MK + D+ +G V PL I+K LTK PE Y PH VALR+ + ++ GD
Sbjct: 1013 YMKGVAQDVRSGNVYPLEEFVISKSLTKEPESYHG-TGYPHAVVALRMKQ-RKEGVRVGD 1070
Query: 961 TISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
I Y+ICE E +AY+I+E++ + L +DV +YLS Q++P V RL E I+G
Sbjct: 1071 LIPYVICEG--DEHIDDKAYHIDEVRRSDGLSVDVEWYLSSQLYPPVMRLCEHIQGFVPE 1128
Query: 1021 RIAECLGLDTSL 1032
+++E + + + +
Sbjct: 1129 QLSEAMCIASHM 1140
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 384 MFFLDAFEDIYK--QPGTVYLFGKVFV-KENNSHSSCCVIVQNIDRKIYLLPRSEHLKTK 440
++ DA E + PGT+ LFGKV + +E+ SCCV +Q++ R ++LLP K
Sbjct: 244 FYWFDAKEQPHTLTAPGTILLFGKVCMNEEDEEFRSCCVRIQHVHRNVFLLP-------K 296
Query: 441 EPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAKCPALP 499
E + A+V E + I I + + + +E+ YAF PGVP + + + ++ Y + P P
Sbjct: 297 EGSTDAEVVQEINAICRGSGIEERRIKFVERYYAFEEPGVPREKNRWAKLVYPGRYPPFP 356
Query: 500 SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEK 559
+ V G S LE L+++++ GPS+LE R+S CK E +
Sbjct: 357 NKGGLTHVQVVVGASRSLLELFLIKKRLMGPSYLEIEHLVTAMDRVSHCKTEFLVPSPKD 416
Query: 560 IRITN 564
I++ N
Sbjct: 417 IKVYN 421
>gi|343469847|emb|CCD17281.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 843
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 212/487 (43%), Positives = 299/487 (61%), Gaps = 32/487 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLHAFH +V+PDK+ ++E + + ++ +
Sbjct: 171 RLTLLAGNLWSRTLYGARSERIEYLLLHAFHNLKFVVPDKK----RQEMKRGRQDDEDET 226
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------------PV 668
++K Y GG+VLEPK G Y ++I+L+DFNSLYPS+IQE+NIC+TTI P
Sbjct: 227 KRKTKYQGGMVLEPKSGLYSEYILLLDFNSLYPSLIQEFNICYTTIERDENTVNADVPPP 286
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
L T LP + ILP I+ LV+SRR++K +MK + L M +IRQ
Sbjct: 287 ESLACLSCKT--AGLPSPCLHKCILPKVIRGLVDSRREIKRIMKSEKDPNSLAM-LEIRQ 343
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIYGDTD 786
KALKLTANS+YGCLGF +SRF+AQPLA LVT +GR L NT L+ ++ VIYGDTD
Sbjct: 344 KALKLTANSVYGCLGFEHSRFYAQPLAELVTRQGRLALQNTVELIPQISPSIRVIYGDTD 403
Query: 787 SLMISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+MI + +D V +G +IK + N+ Y+ LELDIDGV++ MLLL+KKKYAALS+
Sbjct: 404 SVMIQTGIKDDIGKVRNLGFEIKGKVNQRYQSLELDIDGVFRAMLLLRKKKYAALSVVDW 463
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
I +E+KG+D+VRRDW L+ V+ +IL+ + +D L + +MK
Sbjct: 464 QAEGKIYKKEVKGLDMVRRDWCPLSQHVSDSVLKRILNAEGG-----EDILDFVIRYMKD 518
Query: 906 IRTDLDNGFV-PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
I D+ +G PL I+K LTK PE Y PH VALR+ + ++ GD I Y
Sbjct: 519 IAQDVRSGRTYPLEDFVISKSLTKEPESYRG-TGFPHAVVALRMKQ-RKENVRVGDLIPY 576
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
+ICE S +AY+++E++ L +DV +YLS Q++P V RL E I+G +++E
Sbjct: 577 VICEG--SSHVDDKAYHVDEVRRADGLSVDVEWYLSTQLYPPVMRLCEHIQGFVPEQLSE 634
Query: 1025 CLGLDTS 1031
+G+ S
Sbjct: 635 AMGIAAS 641
>gi|66812196|ref|XP_640277.1| DNA polymerase alpha catalytic subunit [Dictyostelium discoideum AX4]
gi|74855136|sp|Q54SV8.1|DPOLA_DICDI RecName: Full=DNA polymerase alpha catalytic subunit
gi|60468293|gb|EAL66301.1| DNA polymerase alpha catalytic subunit [Dictyostelium discoideum AX4]
Length = 1509
Score = 363 bits (931), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 249/687 (36%), Positives = 381/687 (55%), Gaps = 42/687 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN ++L R+ER E+LLLH FHEK Y+LPDK Y K+ G G +K
Sbjct: 827 QLTNLAGNQWDKSLKSNRAERIEYLLLHNFHEKKYLLPDKIYQKSSSSGGGGGAKDKDN- 885
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
AAYSGGLVL+PK FYD++++L+DFNSLYPSIIQEYN+CFTTI R+ +D D
Sbjct: 886 --HAAYSGGLVLDPKIDFYDRYVVLLDFNSLYPSIIQEYNVCFTTIN-RVKRD-DGKWEE 941
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
P ++ GILP + LV RR++K M+Q + + QYDI+Q+A+KL ANSMYG
Sbjct: 942 AMPPPSSIEKGILPKVLHGLVSKRREIKKRMEQEK-NKIIKAQYDIQQQAVKLIANSMYG 1000
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLGF +SRF+A PLA LVT KGRE L S+V + Y+VIYGDTDSLMI V ++
Sbjct: 1001 CLGFSHSRFYALPLAELVTRKGRENLQKGASIVNKMCYDVIYGDTDSLMIYTGVGTFNEA 1060
Query: 801 FKIGNQIKSECNKLYKQ--LELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
IG +I+ + N Y+ +E+ +DG++K +LL KKKKYA L ++ + C +E KG
Sbjct: 1061 ETIGKEIQKKINDQYRGSVMEIGLDGIFKRLLLFKKKKYACLKEFRIDSTTTKCERENKG 1120
Query: 859 VDVVRRDWSQLASEAGKFVISQIL-DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
+D+VRRD+ L + G++V++ IL E+ +SL I E+++ ++ + + + +
Sbjct: 1121 IDIVRRDYCDLTKDIGQWVLNLILGGEEKIALFSL------IKEYLESVQQQIKDNTLAV 1174
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTS----E 973
ITK L+K PEEY D PHVQVAL++ ++ G+ + YII +S E
Sbjct: 1175 EKFIITKTLSKQPEEYNDADIQPHVQVALQM-RAKGLHVQPGEQVPYIITHGNSSSDIKE 1233
Query: 974 AATQRAY---NIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
RA ++E +++ +D+++YLSQQI P + R PI G + +A+ LG+
Sbjct: 1234 EWHHRARAPSDVESIQD-----VDIDWYLSQQILPSIQRNTGPI-GMEPHELAQWLGMTG 1287
Query: 1031 SLYRSQIKESIQQSEENILG--VGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLST 1088
+ Y+ Q QQS ++ E+++Y+ C F F C P C Q N ++ +
Sbjct: 1288 TKYQKQFDHLQQQSNQDFKPRYTLSTEDLRYKQCKSFNFEC--PYCGQNNEFTGIVKIDS 1345
Query: 1089 HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRC 1148
G +C K+P L L N+L ++ Y+ +Y + L+C + C +++
Sbjct: 1346 EGKSESGFDCNQCHAKIP----LKKLANQLQLNIRTYLKQYNDWDLRCTE--CEKVSKNY 1399
Query: 1149 PLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMG 1208
R + K+ ++ T +L+ Q+SFF + L+ SD + +E
Sbjct: 1400 K-ETSYRCARPQCRGKMIQIMTSSKLFNQISFFSKL--FRNDLSNSDNTTTIIPNEDQNT 1456
Query: 1209 YCKMKQHVERFLESSAYNIVDLKKLFS 1235
+ KQ ++ FL V+L L +
Sbjct: 1457 LKQAKQIIDSFLSKFDQYNVNLNSLLT 1483
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 54/257 (21%)
Query: 356 TSEPQVHSRTADDSLPLATDHE-----NKKVFRM-------FFLDAFEDIYKQPGTVYLF 403
T++ S+T DS+ L E N + +M FFL E+ + G + LF
Sbjct: 341 TNQEDWWSKTGVDSVVLVKKLEEIMPKNSDLLKMNMDGSLDFFLLTTEE--DKQGRIILF 398
Query: 404 GKVFVKENNS--------------------------HSSCCVIVQNIDRKIYLLPRSEHL 437
GKV ++ + S ++SCC+I++ ++R ++ LPR L
Sbjct: 399 GKVKLQASKSNKPGGGGGATKQTSITDEPVTKVPLKYASCCIIIEKMERNVFFLPRDYKL 458
Query: 438 -----KTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAF-------NLPGVPDLSE 485
T V+ + +E Q+ + KI D+K +K+++ AF N P V +
Sbjct: 459 DQDGESTTIQVTDTMIEAELKQLVDRSKIKDYKLKKVKRTSAFDYSVPHKNGP-VGEQHY 517
Query: 486 YLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSR 544
++ Y + P+D+ G TF +G SS +E L++RKI GP+WL F +
Sbjct: 518 VWKLSYPSNQMVFPNDIKGSTFRCAYGITSSPVELFLIKRKIMGPTWLTVSGITLNFDQK 577
Query: 545 ISWCKYEVQCNQMEKIR 561
S+ +YE + I+
Sbjct: 578 KSFARYEATVKSFKSIK 594
>gi|340055506|emb|CCC49825.1| DNA polymerase alpha catalytic subunit, fragment, partial
[Trypanosoma vivax Y486]
Length = 916
Score = 362 bits (928), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/490 (43%), Positives = 300/490 (61%), Gaps = 40/490 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T++ GN+ SRTL G RSER E+LLLHAFH +V PD+ KK + G ++ +
Sbjct: 245 RLTSLAGNLWSRTLYGARSERIEYLLLHAFHNLKFVTPDR-----KKLDAKRGRHDEDET 299
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
++K + GG+VLEPK G Y ++I+L+DFNSLYPS+IQE+NIC+TTI + D +T+
Sbjct: 300 KRKTKFQGGMVLEPKSGLYSEYILLLDFNSLYPSLIQEFNICYTTI------ERDESTVA 353
Query: 681 EYLPEHQ-------VDTG---------ILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
+P + TG ILP I+ LV+SRR++K LMK ++L +
Sbjct: 354 AEVPPPESLICRACAATGLPSPCSHKCILPKVIRGLVDSRREIKRLMKTEKDPANLAL-L 412
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN--YEVIY 782
+IRQKALKLTANSMYGCLGF +SRF+AQPLA LVT +GR L NT L+ ++ VIY
Sbjct: 413 EIRQKALKLTANSMYGCLGFEHSRFYAQPLAELVTRQGRLALQNTVELIPQVSPSIRVIY 472
Query: 783 GDTDSLMISCNVND-YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+MI + D V +G +IK + N+ Y+ LELDIDGV++ MLLLKKKKYAALS
Sbjct: 473 GDTDSVMIQTGIKDSIGKVRDLGFEIKGKVNQKYQSLELDIDGVFRAMLLLKKKKYAALS 532
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ + +E+KG+D+VRRDW L+ V++++L+ + +D L I
Sbjct: 533 VVDWQGEGKMYQKEVKGLDMVRRDWCPLSQRISDAVLNRVLNAEGG-----EDVLDFIMR 587
Query: 902 HMKKIRTDLDNGFV-PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
+MK D+ +G V PL I+K LTK PE Y PH VALR+
Sbjct: 588 YMKDRAEDVRSGKVYPLEDFVISKSLTKEPESYRG-SGFPHAVVALRMKQRKENMFVSVT 646
Query: 961 TISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
I Y+IC+ G E+ +AY+++E++ L +DV +YLS Q++P V RL E I+G A
Sbjct: 647 LIPYVICDGG--ESNDDKAYHVDEVRRTKGLCVDVEWYLSSQLYPPVMRLCEHIQGFVAE 704
Query: 1021 RIAECLGLDT 1030
+++E +G+ +
Sbjct: 705 QLSEAMGITS 714
>gi|6015012|sp|Q27152.1|DPOLA_OXYTR RecName: Full=DNA polymerase alpha catalytic subunit
gi|1401224|gb|AAB57771.1| DNA polymerase alpha catalytic subunit [Oxytricha trifallax]
Length = 1513
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 259/730 (35%), Positives = 388/730 (53%), Gaps = 70/730 (9%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKKEGEETGE--- 614
+++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ + K+ K E
Sbjct: 792 LQLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKAPFAKDFKRNMFADEFEE 851
Query: 615 ------ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-- 666
KG RKKAAY+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+
Sbjct: 852 LKSGKGPKKGGKRKKAAYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNR 911
Query: 667 -PVRMLQDSDITTLCEY---------------LPEHQVDT--GILPSEIKKLVESRRQVK 708
P + S++ + + LP+ V+ +LP+ ++ LV+ R+ VK
Sbjct: 912 RPTKNFDGSEVKSQFKAAGTDANEGNEVEEADLPDKNVNVKDAVLPNVLRDLVQKRKAVK 971
Query: 709 ALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
MK + L Q +IRQKA+KLTANSMYGCLGF +SRF AQ +AAL+T GR+ LL
Sbjct: 972 EKMKNEK-DAVKLSQLEIRQKAIKLTANSMYGCLGFGSSRFHAQAIAALITKTGRDTLLR 1030
Query: 769 TKSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVY 826
TK + EN L + V+YGDTDS+MI+ N ++G + + + LYK LE++IDGV+
Sbjct: 1031 TKDIAENKLGFNVVYGDTDSIMINTGTNQLQQSLEMGKRPQGLKLIALYKCLEIEIDGVF 1090
Query: 827 KYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS 886
K +LLLKKKKYAAL QE+KG+D+VRRDW L+ G FV++QIL +
Sbjct: 1091 KSLLLLKKKKYAALKYEGFGTPDAKVVQEVKGLDMVRRDWCPLSKNVGNFVLNQILSGKQ 1150
Query: 887 YTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVAL 946
D L N++E++ I + N + L ITKQLTKA EY+D K PHV VA
Sbjct: 1151 REDVVL-----NLNEYLSDIGEKMKNNGITLDQFIITKQLTKAISEYSDIKGQPHVAVAQ 1205
Query: 947 RLNNTN-SKKLKQGDTISYIICE-----DGTSEAATQRAYNIEE-LKNNSKLKIDVNYYL 999
RL N S+ + I Y+I T+ A +AY+ EE + + K+ +D+ +Y+
Sbjct: 1206 RLKNQGKSESDLVNNFIPYVIGAQPFDPSKTNPALAGKAYHPEEVVSSKGKILLDIEWYI 1265
Query: 1000 SQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEEN---------ILG 1050
+ Q+ P +TRL+E I+G D +A+CLG+D Y+ E N IL
Sbjct: 1266 TMQVLPPITRLIEHIDGIDVEFVAQCLGVDPKKYKYHSSEKKTGETNNDDGTLIQNPILQ 1325
Query: 1051 VGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVP-PYT 1109
+K + + C P C + + P + G L + +C P P
Sbjct: 1326 TETERSLKGRTIAELTIKC--PHCSE--SYHFPG-IFQDGKNNTLSGLLCIKCTQPIPEA 1380
Query: 1110 YLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVY 1169
Y+ N+++ + + + YY+G +C++P C ++R+ L + K K Y
Sbjct: 1381 YIQ---NRVTLFLKQLLTLYYQGNKQCQEPACGAVSRQ--LLYNNKCINLACKLKNDTRY 1435
Query: 1170 TELQLYQQLSFFHYICDITKALTKSDTPSIKFDS----ETYMGYCKMKQHVERFLESSAY 1225
TE + L + + ++ K + ++ + + + +M+ V+ + S Y
Sbjct: 1436 TEQKTNDTLRYLQGLFNVKKYIQENQKNGCVHKTVEEVPNFDAFARMQGKVDDIMIRSKY 1495
Query: 1226 NIVDLKKLFS 1235
N VDL +F+
Sbjct: 1496 NKVDLSSIFN 1505
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 25/233 (10%)
Query: 349 AIQTEPSTSEP--------QVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGT- 399
I+ + TS+P QV + T + LPL +EN +++DA E+ GT
Sbjct: 319 GIKLDNRTSKPIRNLEIWNQVLANTQEFPLPL---NENG-TLSFYWIDAHEE---NNGTD 371
Query: 400 VYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP------RSEHLKTKEPVSIAQVYSEFD 453
+Y+FGK++ + SC + V + R++Y LP R +E + V E D
Sbjct: 372 LYIFGKIYQPQMRQFVSCSMKVNGMQRELYALPKMRGKARGALTVEEEKQQVRAVMMELD 431
Query: 454 QIATQY--KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVF 511
I + +I ++ + + +KYAF +P ++L+++Y + P LPS + G+TF +F
Sbjct: 432 DIRKKRFPQISKWRCKPVNRKYAFEMPIQHGEHQFLKIKYDSTMPPLPSTIQGNTFECIF 491
Query: 512 GTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWCKYEVQCNQMEKIRIT 563
G+ S LE +L+RKI+GP W+ K + +WC+ + + + + +T
Sbjct: 492 GSTQSMLELFILKRKIRGPCWMTIKNPTKVTDFKKTWCRQGIVIDNPKNVEVT 544
>gi|71841812|gb|AAZ43189.1| DNA polymerase alpha [Eschaneustyla sp. WJC-2005]
Length = 1548
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 270/751 (35%), Positives = 392/751 (52%), Gaps = 106/751 (14%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQY--GKNKKEGEETGE---- 614
++TN+ GN+ R+L R+ERNE LLLH F++K Y+ PDK+ GK K+ E+ E
Sbjct: 823 QLTNIAGNLWYRSLQNARAERNEMLLLHEFYQKKYICPDKKVLSGKELKQAEQEQEEAIN 882
Query: 615 ----------ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+ +KKA Y GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFT
Sbjct: 883 IIQSSNKEEKSGANNKKKKAKYQGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFT 942
Query: 665 TI---PVRMLQDSDITT--LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSD 719
T+ P + S+I E Q ILP +K LV RRQVK LMK+ S
Sbjct: 943 TVNRKPTKNFDGSEIEIDEDVEVPSGKQNQEAILPKILKDLVLRRRQVKELMKKEK-DSV 1001
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNY 778
L Q +IRQKA+KLTANSMYGCLGF +SRF A+ +AAL+T KG + LL TK + E+ L +
Sbjct: 1002 KLQQLEIRQKAIKLTANSMYGCLGFSSSRFHAKSIAALITRKGGDTLLRTKDIAESKLQF 1061
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
V+YGDTDS+MI+ N + G ++K+E N LYK LE++IDGV+K +LLLKKKKYA
Sbjct: 1062 NVVYGDTDSIMINTGTNQLNDALNTGRKLKAEVNTLYKCLEIEIDGVFKCLLLLKKKKYA 1121
Query: 839 ALSISKL-----SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
AL + + K IC E+KG+D+VRR+W L+ + FV+ QIL + D L
Sbjct: 1122 ALKVENFLSPNENERKTIC--EMKGLDMVRREWCALSKKVSGFVLDQILSGKQREDVVLQ 1179
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
++E++ ++ + L ITKQL +A ++Y + K LPHV VA RL
Sbjct: 1180 -----LNEYLSEVGRKMKESSYNLGEFIITKQLNRALKDYQNSKGLPHVAVAKRL-AAQG 1233
Query: 954 KKLKQGDTISYIICE-DGTSEAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLL 1011
K + I Y+IC+ + + ++AY +E N + L++D+++Y+ QQI P +TRL+
Sbjct: 1234 KNESDLNFIKYVICKIEKDNSTLEEKAYTPDEFLNKKNNLQLDLDWYIQQQILPPITRLI 1293
Query: 1012 EPIEGTDAVRIAECLGLDTSLYR-----SQIKESIQQSE-ENI-----LGVGEA------ 1054
E I+G + +A+CLG+D Y+ S K+S+ E EN+ + +G+A
Sbjct: 1294 EHIDGIEIDFVAQCLGVDPKKYKQNYHHSGAKKSLGGREFENLNEQQNMFLGKAVMQYDM 1353
Query: 1055 -EEVK-----------YQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPE 1102
+K Y+ +FEF + Q T G++ C NP
Sbjct: 1354 EHNIKQRSFGLLKVQCYKCAHQFEFNGVYQKDGQ-----------TSGLI-----CENPT 1397
Query: 1103 CKVP-PYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCH 1161
C +P P Y+ N++ M + YY+G C + C + TR+ L +K +
Sbjct: 1398 CAIPLPEQYIK---NRVQLFMKEMTTLYYQGTYICSEKDCKNATRQ--LIIKNKCIENTC 1452
Query: 1162 KYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYC----------- 1210
K K+ YT+ L + + D+ K ++ +
Sbjct: 1453 KGKVQLDYTDAATNDTLRYLQSLFDVDKWTNENFKKKQAQQQKQQQQQKEQAIVIQQTHP 1512
Query: 1211 ------KMKQHVERFLESSAYNIVDLKKLFS 1235
+K V LE S YN VDLK++F
Sbjct: 1513 HKDIMDNLKYTVGDLLEKSKYNKVDLKQIFG 1543
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 246/542 (45%), Gaps = 62/542 (11%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKH--KYEFTADENVYEEVSEKEYTERVLKRQ 101
G K+ ID + K + +KL++ + G K +Y+ + ++ E+ ++EY + +R+
Sbjct: 50 GREIKKTGIDSSIK-SGLEKLREAREGGKKRTDQYQIQEERRIFAEIDDEEYEKLQKERR 108
Query: 102 EDDWIDDDGGDGYVEDGREIFD-DDIEDV------------PQKKEKHDKRKKNKNIQNP 148
DD+I +D G GYV+ G EI++ DDI+D P + + I+N
Sbjct: 109 NDDFIVNDDGLGYVDKGGEIWEVDDIDDEKKNKGKKKKKIDPNENHITNFMMPKTTIRNS 168
Query: 149 NAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLK-LNTKTNEIVIPK 207
N Q V K K E + N ++ +L+ E+N A L+ +N V K
Sbjct: 169 NKVYKPQ-------VDKPKVSEAESKN--IMDNLIEEINQCDAEDLEDVNASAYNAV--K 217
Query: 208 EEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPS-PLKDEIKSNDSVMEVEMNVAEQSKE 266
E P A FSK ++K PI+ S L+ K + E E + + SK+
Sbjct: 218 EVLNKPIA------FSKEEYDQQKYNIPIRPLSSYTLEQNNKKKRNREEYEEGL-QSSKK 270
Query: 267 EPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAV 326
E +D + +D + + + A Q E +S + + N+++ S
Sbjct: 271 ESLDSKKMKSNNTSYYDAKSNQNNTINDSAFKSAQSELNQSHNDND----MNIDTSSHNE 326
Query: 327 ELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSE-PQVHSRTADDS----LPLATDHENKKV 381
E +S P E + +W ++ + S E V++ A ++ LP D
Sbjct: 327 EQKSSIIPSTSILNEAQNDDWNNVKMQSSNQEFKSVNTSQALENDKYKLPFNQDG----T 382
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS----EHL 437
+++DA E+ Q VYLFGKV+ E N SC + ++ + R +Y+LP++
Sbjct: 383 LSFYWIDAHEENNGQE--VYLFGKVYQPEVNKFVSCALQIKGMKRIVYILPKAGKNGRGT 440
Query: 438 KTKEPVSI--AQVYSEF-DQIATQY-KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSA 493
+T+E ++ +Y+E D I ++ +I ++ + + + YAF +P ++++++ A
Sbjct: 441 ETQEELAKNGTDIYNEIKDLINKRFPQIKNWGIKSVYRNYAFEMPLQHGEHYFMKMQFPA 500
Query: 494 KCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK---FPSRISWCKY 550
+ LP DL G F FGT S LE LL+R I GP WL A+K + +WC+
Sbjct: 501 EFGTLPRDLKGKXFDCTFGTNQSMLELFLLKRNIMGPCWLTITGAQKVENISQKKTWCQQ 560
Query: 551 EV 552
E+
Sbjct: 561 EI 562
>gi|328866535|gb|EGG14919.1| DNA polymerase alpha catalytic subunit [Dictyostelium fasciculatum]
Length = 763
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 241/668 (36%), Positives = 371/668 (55%), Gaps = 58/668 (8%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN+ +++L G R+ER E+LLLH F++K Y+LPDKQ + + +NK
Sbjct: 8 QLTNLAGNLWNKSLTGNRAERIEYLLLHNFYQKKYILPDKQSRR-----DSLAASNK--- 59
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD----SDI 676
R KAA+SGGLVLEPK+ +YDK+++L+DFNSLYPSIIQEYN+CFTTIP R+ +D S
Sbjct: 60 RAKAAFSGGLVLEPKRAYYDKYVVLLDFNSLYPSIIQEYNVCFTTIP-RIKKDLGDQSKF 118
Query: 677 TTLCEY-------------------LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLS 717
+ E P + V GILP + LV R+ V+ M+
Sbjct: 119 AGVDEVDKPATSTRSLGSKGWELAVPPSNTVAKGILPQVLNYLVNRRKDVRKKMEVEK-D 177
Query: 718 SDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN 777
+ + Q DI+Q+A+KL ANSMYGCLGF +SRF+A PLA LVT KGRE L + + E +N
Sbjct: 178 ATIKQQLDIKQQAIKLVANSMYGCLGFTSSRFYALPLAELVTRKGRENLEKSADITERMN 237
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ--LELDIDGVYKYMLLLKKK 835
+ VIYGDTDS+M+ V+ Y+ IG QIK++ N +K +E+ +DGV+K +LLLKKK
Sbjct: 238 HSVIYGDTDSIMVYTGVSTYNEAQDIGRQIKTKINNQFKNSVMEIGLDGVFKRLLLLKKK 297
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYAAL +KLS+ + KG+D+VRRDW L G ++ +L + L
Sbjct: 298 KYAALIETKLSDNTFKTVIQNKGLDIVRRDWCDLTKTIGNKILEMLLSGEEKESSKL--- 354
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
L+ I +++IR D++ G V + ITK L+ PE Y D + PHV VAL +
Sbjct: 355 LEEIKSFLEQIRKDINEGLVSIDQFIITKTLSANPEAYNDGEHPPHVNVALEMKRKGLIA 414
Query: 956 LKQGDTISYIICEDGTSEAATQRAYNIEELKNN---SKLKIDVNYYLSQQIHPVVTRLLE 1012
+QGD I Y+I + + +++ L + S +ID+++YL+QQI P R+ E
Sbjct: 415 -QQGDAIPYVITLGNGNNNSNLESWSKRALHPSDITSFEQIDLDWYLAQQILPPTYRITE 473
Query: 1013 PIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNP 1072
+ G + ++A LG+ Y+S+ + Q +N L + E+ +++ C+K EF C P
Sbjct: 474 LL-GIEEQKLASWLGMSNIKYKSKSNQQNQGGFDNRLQQQQVEDTRFKDCEKPEFNC--P 530
Query: 1073 SCKQVNTVEAPTRLST-----HGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIV 1127
SC+++ R++ V+ C + + + L L+N+L+ +I
Sbjct: 531 SCRKMTVFSGIKRITLGPEDDREVIESGTTCQHCQKQFG----LAVLLNQLTMQTRSFIK 586
Query: 1128 KYYEGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKLHRVYTELQLYQQLSFFHYICDI 1187
++ + LKC + CS +++ K+ CT KL ++ +L +QL F + +
Sbjct: 587 QHQDWNLKCVE--CSHVSKH--YSDKSFKCTRSCNGKLIQIMNCQKLLRQLYFMKKVFVL 642
Query: 1188 TKALTKSD 1195
+ KSD
Sbjct: 643 EHSNKKSD 650
>gi|330818780|ref|XP_003291516.1| hypothetical protein DICPUDRAFT_49884 [Dictyostelium purpureum]
gi|325078288|gb|EGC31947.1| hypothetical protein DICPUDRAFT_49884 [Dictyostelium purpureum]
Length = 1459
Score = 352 bits (903), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 248/680 (36%), Positives = 371/680 (54%), Gaps = 47/680 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+ GN +++L R+ER E+LLLH F+EK Y+LPDK Y KK+ +G
Sbjct: 799 QLTNLAGNQWNKSLKSNRAERIEYLLLHNFYEKKYLLPDKVYQSIKKDSSNSG------- 851
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
YSGGLVL+PK FYD++++L+DFNSLYPSIIQE+N+CFTTIP +D
Sbjct: 852 -----YSGGLVLDPKIDFYDRYVVLLDFNSLYPSIIQEFNVCFTTIPRERREDGKWVEAE 906
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
P + GILP+ +K LV RR++K M+ + Q DI+Q+A+KL ANSMYG
Sbjct: 907 P--PSSSIKKGILPTVLKSLVGKRREIKKKMENEKNETQK-KQLDIQQQAVKLIANSMYG 963
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
CLGF NSRFFA PLA LVT KGRE L S+V +NYEV+YGDTDSLM+ V ++
Sbjct: 964 CLGFSNSRFFALPLAELVTRKGRENLQKGVSIVGKMNYEVVYGDTDSLMVYTGVPTFNEA 1023
Query: 801 FKIGNQIKSECNKLYKQ--LELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
IG +I+ + N+ Y+ +E+ +DG++K +LL KKKKYA L ++ +E KG
Sbjct: 1024 ETIGREIQKKINESYRNSVMEIGLDGIFKRLLLFKKKKYACLKEYRIDANTTATERENKG 1083
Query: 859 VDVVRRDWSQLASEAGKFVISQILD-EQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
+D+VRRD+ L E G++++ IL E+ ++L I E+++K L +
Sbjct: 1084 LDIVRRDYCGLTKEMGQYLLDLILSGEEKIVLFTL------IKEYLEKTSQKLKENSYEV 1137
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQ 977
ITK L+K E+Y D PHVQVA+ L ++ GD + Y+I + G E Q
Sbjct: 1138 DKFVITKTLSKPIEDYNDADIQPHVQVAI-LQKNKGHHIQVGDQVPYVITK-GDKEWY-Q 1194
Query: 978 RAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQI 1037
RA + ++++ S ID ++YLSQQI P + R PI GT+ ++A LG+ + Y+
Sbjct: 1195 RARDPKDVE--SMEDIDTDWYLSQQILPSIQRNTGPI-GTEGAQLATWLGMTNTKYQRPD 1251
Query: 1038 KESIQQSE--ENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVL 1095
+ QSE +N V +E+ +Y+ C F F C P C N + T+ + +
Sbjct: 1252 SAASAQSEYDKNRQIVWSSEDFRYKQCKSFSFEC--PYCYNDNEFTSVTKANNDDQIRSG 1309
Query: 1096 DECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGW-LKCEDPGCSDLTRRCPLGLKT 1154
+C + KVP + L+N+L ++ Y+ K Y W L+C + C +++
Sbjct: 1310 FDCAHCNAKVP----IKKLLNQLQINIRNYL-KQYNNWDLQCTE--CEKVSKSYKENSYR 1362
Query: 1155 RLCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPSIKFDSETYMGYCKMKQ 1214
C + K+ + T +L+ Q+S+F + SD SI + + + + KQ
Sbjct: 1363 CQRPQC-RGKMIQSMTSSKLFNQISYFLKLFKTDHVNNLSD--SIPVEDQNIIK--QAKQ 1417
Query: 1215 HVERFLESSAYNIVDLKKLF 1234
+E FL VDL L
Sbjct: 1418 IIESFLSKFEQYNVDLSSLL 1437
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 414 HSSCCVIVQNIDRKIYLLPRSEHL-KTKEPVSIA----QVYSEFDQIATQYKILDFKSRK 468
+SSCC+ V+N+ R ++ LPR L ++ E +I ++ E + + +I D+K +K
Sbjct: 406 YSSCCIFVENMIRNVFFLPRDYILDESGESTTIQTTDERIEKEIKSLMEKNRIKDYKIKK 465
Query: 469 IEKKYAF-------NLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENL 521
+++ AF NLP +L+ + +V Y + PALP+D+ G TF +G SS E
Sbjct: 466 VKRTSAFDYQVAHKNLPISEELNVW-KVSYPSTHPALPNDIQGSTFRCAYGITSSPSELF 524
Query: 522 LLERKIKGPSWLEFPEAEKFPSRI----SWCKYEVQCNQMEKI 560
LL+RKI GPSWL + I S+C+YE++ + I
Sbjct: 525 LLKRKIMGPSWLTISAGYQMEFSIGQKKSYCRYEIKTKSFKDI 567
>gi|323449691|gb|EGB05577.1| hypothetical protein AURANDRAFT_30667 [Aureococcus anophagefferens]
Length = 1117
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 261/716 (36%), Positives = 379/716 (52%), Gaps = 89/716 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK- 619
++T + GN+L+RTL G R+ER E+LLLH FH Y+ P+KQ + + G+ K +
Sbjct: 427 QLTAISGNLLARTLKGHRAERIEYLLLHEFHRIKYIAPEKQRYDEDSDDDSNGKKGKKRD 486
Query: 620 ---GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
GR KAAY GGLVLEPKKGFYD ++L+DF SLYPSIIQEY+ICFTTI D
Sbjct: 487 RHAGRAKAAYQGGLVLEPKKGFYDSHVLLLDFASLYPSIIQEYDICFTTI--------DW 538
Query: 677 TTLCEYLPEHQVDTGILPSE--IKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
+ LPE D +K L++ RR+VK L+K+ + L Y+IRQ ALKLT
Sbjct: 539 SKYA--LPEKLEDAPAAKRRAVLKALIDRRREVKQLIKKEK-NPKTLETYNIRQMALKLT 595
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCN 793
ANSMYGCLGF +SRFFA+PLAALVT+ GR+ L T + E L EVIYGDTDS+MI+
Sbjct: 596 ANSMYGCLGFSHSRFFAKPLAALVTSLGRDTLQATADVAEKELGLEVIYGDTDSIMINTR 655
Query: 794 VNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK-LSNGKMIC 852
+D V +GN++K NK Y+ LEL++DG++K MLLLKKKKYAAL +++ G++
Sbjct: 656 TDDLAVVKDLGNKVKKAVNKRYRLLELELDGIFKAMLLLKKKKYAALVVNEDPKTGQLSY 715
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
+E KG+D+VRRDW L+ G ++ +L + + ++ ++ + +
Sbjct: 716 KKETKGLDLVRRDWCPLSKATGTAILDHLLSGEGSEAI-----VSAVNAVLEDVGQRARS 770
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTS 972
G V + IT+ L K E+Y D K+ PH++VA + + + GD I Y+IC G+
Sbjct: 771 GDVDVADYVITRGLNKPVEKYPDSKSQPHLRVAKAMLK-EGRAVNVGDHIPYVICT-GSD 828
Query: 973 EAATQRAYNIEELKNNSKL---KIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
+ R+Y+ + + L K+DV +YL+QQI P + RL EPI G IA+ LGLD
Sbjct: 829 KNVADRSYHPDAVATKPSLEKPKVDVEWYLTQQILPPIARLCEPIAGMSRASIADKLGLD 888
Query: 1030 TSLYRSQIKES---IQQSEENILGVGEA----EEVKYQFCDKFEFTCMNPSCKQVNTVEA 1082
+ + + S + ++ N+ A +E ++ C C SCK +
Sbjct: 889 ARKFAAAMARSQSALDEANANMRSFTPASLQSDEERFADCQPLVVECG--SCK----LRW 942
Query: 1083 PTRLSTHGVVFVLD-----------------ECINPECKVPPYTYLPHLINKLS---QDM 1122
P L G L+ C + K+ Y +++S Q
Sbjct: 943 PLPLEQRGARARLEAARDAATPAKAAACAALSCGHCGAKLLGYKNAASCFSRVSVALQMA 1002
Query: 1123 NKYIVK-YYEGWLKCEDPGCSDLTR-------RC-PLGLKTRLCTTCHKYKLHRVYTELQ 1173
+ +K YY+GW+ C+D C TR RC G K RL ++ R+YT+LQ
Sbjct: 1003 TRASLKDYYDGWMVCDDSACGARTRQLSCAGVRCLSRGCKGRLVPEANE---KRIYTQLQ 1059
Query: 1174 LYQQLSFFHYICDITKALTKSDTPSI-KFDSETYMGYCKMKQHVERFLESSAYNIV 1228
Y+ L + D KSD + KF +++ V +++SAYN V
Sbjct: 1060 YYRAL----FDDDRLACPPKSDEREVAKF----------LQKQVADDIQASAYNFV 1101
Score = 100 bits (249), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 135/272 (49%), Gaps = 27/272 (9%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPV 443
M++LD E Q G++YL GKV ++ ++++S CV+V++++R ++LPR + ++ E
Sbjct: 1 MYWLDVVE----QSGSIYLVGKVKLEGEDAYASACVVVRDVERSFFVLPRVDP-ESGERY 55
Query: 444 SIAQVYSEFDQIATQY---KILDFKSRKIEKKYAFNLPGVP--DLSEYLEVRYSAKCPAL 498
+A+V++E K FK + +++ Y F VP D +EYL+V+Y +K
Sbjct: 56 PMAKVWAETRAELVPRCVPKQAPFKCKGVKRGYCFGDESVPRDDATEYLKVKYLSKFRPP 115
Query: 499 P---SDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCN 555
P D G + G ++ LE L++RK+ GP W+ + + ++SWC EV+
Sbjct: 116 PRGLCDRGGRVIEKILGAGATPLELFLVKRKLMGPCWIRVDKPKAHSPKVSWCAVEVEVA 175
Query: 556 QMEKIRITN---------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL----PDKQY 602
+ I + VC + +T++ ++ ++E + + A + + PD
Sbjct: 176 SPKAITLARDCPYAAPPLVCTTISLKTVVNPKTHQHEIVAVSALTHRGVGIDGATPDGGR 235
Query: 603 GKNKKEGEETGEANKGKGRKKAAYSGGLVLEP 634
G++++ + A+ G ++ G + L P
Sbjct: 236 GEDERLFAPSPGASHKAGSRRWT-CGTVTLAP 266
>gi|453056078|pdb|4FVM|A Chain A, Crystal Structure Of Yeast Dna Polymerase Alpha
gi|453056079|pdb|4FXD|A Chain A, Crystal Structure Of Yeast Dna Polymerase Alpha Bound To
Dna/rna
gi|453056080|pdb|4FXD|B Chain B, Crystal Structure Of Yeast Dna Polymerase Alpha Bound To
Dna/rna
Length = 910
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 205/496 (41%), Positives = 308/496 (62%), Gaps = 25/496 (5%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 418 YRIQLLTLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 476
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 477 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 536
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 537 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKTET-DPHKRVQCDIR 591
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDTDS
Sbjct: 592 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTDS 651
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 652 VMIDTGCDNYADAIKIGLGFKRLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 711
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 712 GNGTTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 766
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 767 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 825
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 826 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 884
Query: 1018 DAVRIAECLGLDTSLY 1033
+ VR++E LGLD+ Y
Sbjct: 885 NVVRLSEALGLDSKKY 900
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 112/217 (51%), Gaps = 24/217 (11%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE 441
F+MF+LD E T+ LFGKV +K++N S+ V + + R+++ LPR + K
Sbjct: 4 FQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQINGLCRELFFLPR----EGKT 54
Query: 442 PVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP----- 496
P I + + +Y + + +++ + KY+F LP +P S+YL+V + P
Sbjct: 55 PTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIPSESDYLKVLLPYQTPKSSRD 112
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCKYEVQCN 555
+PSDLS DTF HVFG S+ E+ +++ +I GP WL+ A+ R S C EV +
Sbjct: 113 TIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIKGADFNSIRNASHCAVEVSVD 172
Query: 556 QMEKIRITNV-------CGNVLSRTLMGGRSERNEFL 585
+ + I T C ++ +TLM + + E +
Sbjct: 173 KPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIV 209
>gi|453056085|pdb|4FYD|A Chain A, Crystal Structure Of Yeast Dna Polymerase Alpha Bound To
Dna/rna And Dgtp
gi|453056086|pdb|4FYD|B Chain B, Crystal Structure Of Yeast Dna Polymerase Alpha Bound To
Dna/rna And Dgtp
Length = 910
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/496 (41%), Positives = 308/496 (62%), Gaps = 25/496 (5%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 418 YRIQLLTLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 476
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++MDFNSLYPSIIQE+NICFTT+
Sbjct: 477 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVMDFNSLYPSIIQEFNICFTTVD 536
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK +MK +Q DIR
Sbjct: 537 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVMKTET-DPHKRVQCDIR 591
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANSMYGCLG+ NSRF+A+PLA LVT KGREIL+NT+ L E++N V+YGDT+S
Sbjct: 592 QQALKLTANSMYGCLGYVNSRFYAKPLAMLVTNKGREILMNTRQLAESMNLLVVYGDTNS 651
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+MI ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 652 VMIDTGCDNYADAIKIGLGFKRLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 711
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D+ RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 712 GNGTTVLEVKGLDMKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 766
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K +P VQVALR+ + +K G I+++I
Sbjct: 767 IKVETNNIRIDKYKINMKLSKDPKAYPGGKNMPAVQVALRMRKA-GRVVKAGSVITFVIT 825
Query: 968 E--------DGTSEAATQRAYNIEE--LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
+ D + + +RA+ + E +K+N+ L D YYL +QI V RLLE I+
Sbjct: 826 KQDEIDNAADTPALSVAERAHALNEVMIKSNN-LIPDPQYYLEKQIFAPVERLLERIDSF 884
Query: 1018 DAVRIAECLGLDTSLY 1033
+ VR++E LGLD+ Y
Sbjct: 885 NVVRLSEALGLDSKKY 900
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 24/217 (11%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE 441
F+MF+LD E T+ LFGKV +K++N S+ V + + R+++ LPR + K
Sbjct: 4 FQMFWLDYCE----VNNTLILFGKVKLKDDNCVSAM-VQINGLCRELFFLPR----EGKT 54
Query: 442 PVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP----- 496
P I + + +Y + + +++ + KY+F LP +P S+YL+V + P
Sbjct: 55 PTDIHEEIIPL--LMDKYGLDNIRAKPQKMKYSFELPDIPSESDYLKVLLPYQTPKSSRD 112
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYEVQCN 555
+PSDLS DTF HVFG S+ E+ +++ +I GP WL+ A+ + S C EV +
Sbjct: 113 TIPSDLSSDTFYHVFGGNSNIFESFVIQNRIMGPCWLDIKGADFNSIAAASHCAVEVSVD 172
Query: 556 QMEKIRITNV-------CGNVLSRTLMGGRSERNEFL 585
+ + I T C ++ +TLM + + E +
Sbjct: 173 KPQNITPTTTKTMPNLRCLSLSIQTLMNPKENKQEIV 209
>gi|296082407|emb|CBI21412.3| unnamed protein product [Vitis vinifera]
Length = 1561
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 228/533 (42%), Positives = 319/533 (59%), Gaps = 47/533 (8%)
Query: 693 LPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQ 752
L + +KKLVE R+ VK+ +K S + Q DI+Q+ALKLTANSMYGCLGF NSRF+A+
Sbjct: 996 LHTLLKKLVERRKTVKSRLK--TASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAK 1053
Query: 753 PLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC 811
PLA L+T +GREIL +T LV+N LN EVIYGDTDS+MI ++D I ++ E
Sbjct: 1054 PLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYTGLDDITKAKAIAGKVIQEV 1113
Query: 812 NKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLAS 871
NK Y+ LE+D+DG+YK MLLLKKKKYAA+ + + +G E KG+D+VRRDWS L+
Sbjct: 1114 NKKYRCLEIDLDGLYKRMLLLKKKKYAAVKL-QFKDGTPYEVIERKGLDMVRRDWSLLSK 1172
Query: 872 EAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPE 931
E G F +SQIL + S +D +++IH + K++ D+ NG V L ITK LTK PE
Sbjct: 1173 ELGDFSLSQIL-----SGGSCEDVVESIHNSLMKVQEDMRNGEVALEKYIITKSLTKPPE 1227
Query: 932 EYTDRKALPHVQVALRLNNTN-SKKLKQGDTISYIIC-EDGTSEAAT----QRAYNIEEL 985
Y D+ PHVQVALRL + S GDT+ YIIC E GTS ++ QRA + +EL
Sbjct: 1228 AYPDKNQ-PHVQVALRLKQSGYSTGCSAGDTVPYIICCEQGTSSGSSTGIAQRARHPDEL 1286
Query: 986 K-NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQS 1044
K +N K ID++YYL+QQIHPVV+RL I+GT R+A+CLGLD+S ++S+ E+I
Sbjct: 1287 KRDNGKWMIDIDYYLAQQIHPVVSRLCASIQGTSPARLADCLGLDSSKFQSRRSEAINN- 1345
Query: 1045 EENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRL-STHGVV------FVLDE 1097
+ + + A+E +Y+ C+ +C PSC T + PT S H + ++E
Sbjct: 1346 -DFSISLLSADEERYRGCEHLILSC--PSC--FGTFDCPTLFNSVHTSITEKSTQVQVEE 1400
Query: 1098 CIN-------PEC--KVPPYTYLPHLI-NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR 1147
N P+C + P LI N++ + + +I YY+G + C+D C T
Sbjct: 1401 SNNFWQRLRCPKCPEEGDVGRMSPALIANQVKRQADGFISMYYKGSMMCDDETCKHTTNS 1460
Query: 1148 CPLGL--KTRLCTTCHKY-----KLHRVYTELQLYQQLSFFHYICDITKALTK 1193
L + + T C Y +L R YTE LY+QLS+F ++ D + + K
Sbjct: 1461 LNLRVIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRCIEK 1513
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 148/580 (25%), Positives = 248/580 (42%), Gaps = 104/580 (17%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKH---KYEFTADENVYEEVSEKEYTERVLKR 100
GR + + + T + A Q+LK L+ G + ++ ++ +Y+ V E EY + V KR
Sbjct: 9 AGRRRSRGAEATARSDALQRLKALRRGGRRSDGVGFQIKVEDPIYDTVDEDEYDKLVAKR 68
Query: 101 QED--DWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPN--------- 149
+E+ +I DD G GY ++G+E D + VP ++ D + +
Sbjct: 69 REEFRGFIVDDNGSGYGDEGQE-EDWSLAGVPPSSDESDGEAERPKKKKTEKKDPPPKKP 127
Query: 150 ----------AKGDIQKLLANMPVKKKKKEEVQ-LNNDDVLADLLSEVNTTIAPTLKLNT 198
K + + + KK + ++V+ L+ D ++ D+++E A +
Sbjct: 128 SPLSAAAAMMGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRERRRR 187
Query: 199 KTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEM 258
+ +V NF ++ +I PI P P K I DSV + +
Sbjct: 188 GQSGLVSGGR------------NFVPGTTIKMEIS-PISIRPEPTKVTIADGDSVSKTKD 234
Query: 259 NVAEQSKEEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQI-EAIESQSIEEKVDVT 317
SK D ++ Q+ D L + VE + +A+E +S E+ V
Sbjct: 235 GKDLNSKM--------------DAESIVQSHDPLTKVDAVEETVPDAVEDKS-EQAVKRK 279
Query: 318 NVESVSSAV----ELSTSPPP---QVVEKKEHKCAEWEAIQTEPSTS--EPQVHSRTADD 368
V S+++ + +L+ S Q V + A +E PS + E +D
Sbjct: 280 EVHSLNAKIKEEKDLTLSAATAGWQAVRNGGNPSAGYEGEVVNPSLNCEEKADFLLDSDG 339
Query: 369 SLPLATDHENKKVFRMFFLDAFEDIY-KQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRK 427
SLP + LDA E+ Y G +YLFGKV K +++ SCCV+V+N++R
Sbjct: 340 SLPF------------YILDAHEEFYGANMGNLYLFGKV--KAGSAYHSCCVVVKNMERC 385
Query: 428 IYLLPRSEHLKTKE-----------PVSIAQVYSEFDQIATQYK-----------ILDFK 465
+Y +P E VS A + ++ +A+ K + F
Sbjct: 386 VYAIPNDSVFGNDEIMRLEKDIEASRVSPAALRTKLQDVASGLKNEIAKQLLNLNVSTFS 445
Query: 466 SRKIEKKYAFNLPGVPDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLE 524
+++ YAF +P Y L++ Y K P LP+DL G+ F + GT S LE L++
Sbjct: 446 MTPVKRSYAFERADIPVGENYVLKINYPFKDPPLPADLKGEAFCALLGTHCSALELFLIK 505
Query: 525 RKIKGPSWLEFPEAEKFPS--RISWCKYEVQCNQMEKIRI 562
RKI GP WL + P+ R+SWCK+EV + + IRI
Sbjct: 506 RKIMGPYWLSISKFSSCPAPERVSWCKFEVTVDCPKDIRI 545
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 79/140 (56%), Gaps = 34/140 (24%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN+ GN+ +TL G R++R E+LLLH FH K +
Sbjct: 802 LTNISGNLWGKTLQGARAQRVEYLLLHEFHAK---------------------------K 834
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCE 681
AYSGGLVLEPK+G YDK+I+L+DFNSLYPSIIQEYNICFTT V D +
Sbjct: 835 MNQAYSGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTT--VERSPDGSVPR--- 889
Query: 682 YLPEHQVDTGILPSEIKKLV 701
LP + TG+LP + LV
Sbjct: 890 -LPSSKT-TGVLPESLALLV 907
>gi|453055722|pdb|4B08|A Chain A, Crystal Structure Of Yeast Dna Polymerase Alpha,
Selenomethionine Protein
Length = 910
Score = 333 bits (853), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 199/495 (40%), Positives = 297/495 (60%), Gaps = 23/495 (4%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG 609
Y +Q + K ++TN+ GN ++TL G R+ RNE++LLH F +++PDK+ +++ +
Sbjct: 418 YRIQLLTLTK-QLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDKEGNRSRAQK 476
Query: 610 EETGEANKGK--GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
+ E N KKA Y GGLV EP+KG + ++++ DFNSLYPSIIQE+NICFTT+
Sbjct: 477 QRQNEENADAPVNSKKAKYQGGLVFEPEKGLHKNYVLVXDFNSLYPSIIQEFNICFTTVD 536
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIR 727
DI L +P +VD G+LP + LV+ RR+VK + K +Q DIR
Sbjct: 537 ---RNKEDIDEL-PSVPPSEVDQGVLPRLLANLVDRRREVKKVXKT-ETDPHKRVQCDIR 591
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDS 787
Q+ALKLTANS YGCLG+ NSRF+A+PLA LVT KGREIL NT+ L E+ N V+YGDTDS
Sbjct: 592 QQALKLTANSXYGCLGYVNSRFYAKPLAXLVTNKGREILXNTRQLAESXNLLVVYGDTDS 651
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN 847
+ I ++Y KIG K N+ Y+ LE+DID V+K +LL KKKYAAL+++ N
Sbjct: 652 VXIDTGCDNYADAIKIGLGFKRLVNERYRLLEIDIDNVFKKLLLHAKKKYAALTVNLDKN 711
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G E+KG+D RR++ L+ + V++ IL +D ++ LQ ++++++ IR
Sbjct: 712 GNGTTVLEVKGLDXKRREFCPLSRDVSIHVLNTIL-----SDKDPEEALQEVYDYLEDIR 766
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++ + + +I +L+K P+ Y K P VQVALR + +K G I+++I
Sbjct: 767 IKVETNNIRIDKYKINXKLSKDPKAYPGGKNXPAVQVALRXRKA-GRVVKAGSVITFVIT 825
Query: 968 E--------DGTSEAATQRAYNIEELK-NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
+ D + + +RA+ + E+ ++ L D YYL +QI V RLLE I+ +
Sbjct: 826 KQDEIDNAADTPALSVAERAHALNEVXIKSNNLIPDPQYYLEKQIFAPVERLLERIDSFN 885
Query: 1019 AVRIAECLGLDTSLY 1033
VR++E LGLD+ Y
Sbjct: 886 VVRLSEALGLDSKKY 900
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 17/185 (9%)
Query: 382 FRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE 441
F+ F+LD E T+ LFGKV +K++N S+ V + + R+++ LPR + K
Sbjct: 4 FQXFWLDYCE----VNNTLILFGKVKLKDDNCVSAX-VQINGLCRELFFLPR----EGKT 54
Query: 442 PVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCP----- 496
P I + + +Y + + +++ + KY+F LP +P S+YL+V + P
Sbjct: 55 PTDIHEEIIPL--LXDKYGLDNIRAKPQKXKYSFELPDIPSESDYLKVLLPYQTPKSSRD 112
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR-ISWCKYEVQCN 555
+PSDLS DTF HVFG S+ E+ +++ +I GP WL+ A+ R S C EV +
Sbjct: 113 TIPSDLSSDTFYHVFGGNSNIFESFVIQNRIXGPCWLDIKGADFNSIRNASHCAVEVSVD 172
Query: 556 QMEKI 560
+ + I
Sbjct: 173 KPQNI 177
>gi|66359588|ref|XP_626972.1| DNA polymerase alpha catalytic subunit [Cryptosporidium parvum Iowa
II]
gi|46228043|gb|EAK88942.1| DNA polymerase alpha catalytic subunit [Cryptosporidium parvum Iowa
II]
Length = 1488
Score = 331 bits (848), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 213/502 (42%), Positives = 308/502 (61%), Gaps = 41/502 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPD----KQYGKNKKEGEETGEANK 617
+TN+ G + S++L+ R+ERNE+LLLH FH+ +V PD Q K + E E +K
Sbjct: 769 LTNLAGFLWSKSLLFLRAERNEYLLLHEFHKGKFVTPDCIQRNQKYKIRAEDSLISEIDK 828
Query: 618 --GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-PVRMLQDS 674
+K+ YSGGLVLEP G YD FI+L+DFNSLYPSIIQE+NICFTT P + D+
Sbjct: 829 DDNNSKKEETYSGGLVLEPITGLYDSFILLLDFNSLYPSIIQEFNICFTTREPTDLGPDA 888
Query: 675 DITTLCEYL-----PEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL-MQYDIRQ 728
T L +Q D+ +LP ++ LV+ RR +K ++K N+ S Q +IRQ
Sbjct: 889 TETFESSSLIDRNSSSNQFDSTVLPGILESLVKRRRHIKEILK--NMPSGTRKSQLEIRQ 946
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDS 787
ALKLTANS+YGCLG+ NSRF+A+ LA+++T GR+IL TK VE+ +VIYGDTDS
Sbjct: 947 LALKLTANSLYGCLGYKNSRFYAKDLASIITFYGRQILQKTKLKVEDETKLQVIYGDTDS 1006
Query: 788 LMISCNVND------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
+M++ N+ D Y V K+ +QIK NK Y +LELD+DGV + +LLLKKKKYA +
Sbjct: 1007 IMVNTNILDDGNGEGYYHVLKLASQIKQIVNKDYTKLELDLDGVLQRLLLLKKKKYACIQ 1066
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
I ++ E KG+D+VRRDWS L + V +Q+L+ +++ +D + NI
Sbjct: 1067 IVDFHRKQL--KLECKGLDLVRRDWSILT----RNVSTQLLN-LLFSNEPIDTVITNILN 1119
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
++ + L++ +PL ITK LTK P+ Y+D LPHV VA R+ ++ + G
Sbjct: 1120 TLESLNEALNSNSIPLESFIITKTLTKLPQFYSDPYLLPHVIVAKRM-ISSGLPVSSGTE 1178
Query: 962 ISYIICEDGTSEAA----------TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
I YIIC++ S+++ ++RAY+ EE+K+N L ID+ +Y +QQ+ P ++RL
Sbjct: 1179 IPYIICKEVNSQSSDEVAPKSSMLSKRAYSPEEVKSNG-LNIDIEWYKTQQLLPPLSRLC 1237
Query: 1012 EPIEGTDAVRIAECLGLDTSLY 1033
PI G + RI +CLGL+ Y
Sbjct: 1238 APIPGLEISRIGQCLGLEYKQY 1259
Score = 133 bits (334), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 250/536 (46%), Gaps = 98/536 (18%)
Query: 55 TNKFAAFQKLKDLKGQGVKHKYEFTA-DENVYEEVSEKEYTERVLKRQEDDWIDDDGGDG 113
TN A +++ ++ +K +T D +++EEV E+EY + +R+ +++ DD G G
Sbjct: 8 TNAQGALSEIRKIREGKIKASDAYTLKDNDIFEEVDEEEYQNIIKERRSGNFVVDDNGIG 67
Query: 114 YVEDGREIFDDDIEDVPQKK---EKHDKRKKNKNIQNP-NAKGDIQKLLANMP------- 162
Y +DGR++ ++ I +P + +++DK+++ ++I+ N G I + +P
Sbjct: 68 YEDDGRDLMENYIP-LPSENNVAKRNDKKRRKEHIKKGLNEGGSILRQFQFIPDDLAEKD 126
Query: 163 -VKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLAN 221
++ K+K+E + + D+L+ L + ++ + ++ + NE K EP KE
Sbjct: 127 GLRIKQKQETKSKSMDILSTL-KVFDDSLFEDIDMDDRENE----KNEPKISEVKE---- 177
Query: 222 FSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDD 281
D + ++ + +N + S G +E I D
Sbjct: 178 -----------------------DNTRLDEMIQINTLNTSNNS-------GQYENTFIID 207
Query: 282 WDNSQQTQDVLPEQAKVELQIEAIESQSI-EEKVDVTNVESVSSAVELSTSPPPQVVEKK 340
+N TQ+ P Q + + + ES + EE+ + T+ + + E K
Sbjct: 208 -ENESMTQNPSPNQDEQFIPGDTPESLDLLEEQKNYTDEQEILGK------------ECK 254
Query: 341 EHKCAEWEA-IQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGT 399
K + I +PS + QV+ T+ E +F + ++ ED G
Sbjct: 255 YMKLGDGTVNIDRKPSGTSAQVY-----------TNEEESLIF--YLIEVTED--SGAGE 299
Query: 400 VYLFGKVFV------KENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQ-VYSEF 452
+YLFGK+ K + S SCC++++ R +Y+ PR +P+S++Q V E
Sbjct: 300 LYLFGKIMTFSGMDEKIHFSTESCCLVIKETWRSLYVYPRESMPNHPDPISVSQDVAKEI 359
Query: 453 DQIATQYKILDFKSRKIEKKYAFNLPGV---PDLSEYLEVRYSAKCPALPSDLSGDTFSH 509
++ +Y+I + + + + + F+ V P+ +L++ YS+K P+LP++LSG+TFS
Sbjct: 360 LELRKEYRIPKIQIKPVVRNFCFSEKDVKYGPN-QPFLKLLYSSKNPSLPTNLSGETFSR 418
Query: 510 VFGTKSSFLENLLLERKIKGPSWLEFPEAEKF----PSRISWCKYEVQCNQMEKIR 561
+FGT +S EN +++R IKGPSWL + + R S CK EV + IR
Sbjct: 419 IFGTSTSLTENFIIKRDIKGPSWLVISKPYQIVPVGGGRKSQCKVEVHVPNWKSIR 474
>gi|342875492|gb|EGU77242.1| hypothetical protein FOXB_12251 [Fusarium oxysporum Fo5176]
Length = 1161
Score = 328 bits (842), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 193/425 (45%), Positives = 272/425 (64%), Gaps = 22/425 (5%)
Query: 545 ISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-YG 603
I+ VQ + K+ +TN+ GN +RTL G R+ERNE++LLH F+ Y+ PDKQ +
Sbjct: 753 IAALALGVQMLPLTKV-LTNLAGNSWARTLTGTRAERNEYILLHEFYRNKYICPDKQTFR 811
Query: 604 KNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
++ E E +G+KK Y GGLV EP+KG YDKF+++MDFNSLYPSIIQE+NICF
Sbjct: 812 SRQRAEEAQREEEAVEGKKKDKYKGGLVFEPEKGLYDKFVLVMDFNSLYPSIIQEFNICF 871
Query: 664 TTI--PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
TT+ P ++ ++ + P +Q D GILP I LV RRQVK+LMK + + L
Sbjct: 872 TTVDRPATNGEEDEVPEV----PINQ-DQGILPRLIATLVSRRRQVKSLMKDKKATPEEL 926
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVI 781
+DI+Q ALKLTANSMYGCLG+ SRF+A+PLA L T KGREIL +TK L E+ + +VI
Sbjct: 927 ATWDIKQLALKLTANSMYGCLGYTKSRFYARPLAVLTTFKGREILRSTKELAESNSLQVI 986
Query: 782 YGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
YGDTDS+MI+ NV++ FK+GN K N+ YK LE+DID V++ +LL KKKYAA++
Sbjct: 987 YGDTDSVMINANVDNVADAFKVGNDFKKAVNEQYKLLEIDIDNVFRRILLQAKKKYAAIN 1046
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD---RLQN 898
+ + +GK I E+KG+D+ RR++ L+ E + ++++IL S DD +
Sbjct: 1047 LVE-KDGKFIEKMEVKGLDMKRREYCALSKEISQHLLNEIL--------SGDDTEVSIAR 1097
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
IHE++ I + +P+ I QL KAP +Y D ++P VQVALR K +++
Sbjct: 1098 IHEYLSDIAGKMREQTIPVQKYIIHTQLGKAPNDYPDSNSMPQVQVALR-EMAKGKTVRK 1156
Query: 959 GDTIS 963
GD I+
Sbjct: 1157 GDVIA 1161
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 153/575 (26%), Positives = 258/575 (44%), Gaps = 69/575 (12%)
Query: 59 AAFQKLKDLK--GQGVKHKYEFTADENVYEEVSEKEYTERVLKR-QEDDWIDDDGGDGYV 115
A +LK L+ G+ V Y+ +N+Y+EV E Y + V +R +DD++ DD G+GY
Sbjct: 5 ARLAELKALRESGKKVFDTYKVADVDNLYDEVDEDGYKKVVRERLNQDDFVVDDNGEGYA 64
Query: 116 EDGREIFDDDIEDVPQKKEKHDKRKK--NKNIQNPNAK-----GDIQKLLANMPVKKKKK 168
+DGRE +D + +E+ R + KN Q AK DI + + K
Sbjct: 65 DDGREDWDRVQAYGSESEEEATFRGRPTKKNRQEEQAKRAATDKDISEYFKGANRAQPKP 124
Query: 169 EEVQLN-NDDVLADLLSEVNTTI---APTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSK 224
+ V+ +DD L++LL EV+ I AP ++ + PAP
Sbjct: 125 KVVKTKEDDDFLSNLLGEVDNNIPAPAPHTSRVERSGGRRKARALSPAPEP--------- 175
Query: 225 PIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGLWEQMQIDDWDN 284
V KK + + PSPL + +D DD + E + D
Sbjct: 176 ---VPKKTKTLDTRLPSPLPPAPEDDDGFFP------------SADDVILETADVPMSDP 220
Query: 285 SQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSS-AVELSTSPPPQVVEKKEHK 343
+ + Q K +++ E E ++ ++V + ++++ +V L++S P + +++ E
Sbjct: 221 APSSPAAKVAQRKAQIKQEPKEDDDDDDMMEVAHAGTIATTSVNLASSRPIKKIQQAESY 280
Query: 344 CAEWEAIQTEPSTSEPQVHSRTA-DDSLPLATDH--ENKKVFRMFFLDAFE--------- 391
+ +P+ ++ S A + L + T E K + ++ + DA E
Sbjct: 281 PTPASSSPVKPNGAQVDSASWNALTERLNVVTSSPAETKTIGKIDYKDAIEEDGSLNFFW 340
Query: 392 -DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK----TKEPVSIA 446
D + G++ LFGKV K+ S+ SC V V NI RK+Y LPR L+ T E V +
Sbjct: 341 TDYTEVNGSLCLFGKVLNKKTRSYVSCFVKVDNILRKLYFLPRQHRLQDGEETGEEVEMM 400
Query: 447 QVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDT 506
VY E D + T+ + +K + +KYAF L VP ++Y+++ Y P + + G+T
Sbjct: 401 NVYDEIDTMMTKMNVGMYKIKACTRKYAFELRDVPKEAQYMKLLYPYNKPEVDPNRPGET 460
Query: 507 FSHVFGTKSSFLENLLLERKIKGPSWLEFPEA--EKFPSRISWCKYEVQCNQMEKIRITN 564
+SHVFG+ ++ E +L + I GP WL+ +A +K S CK EV + + + +
Sbjct: 461 YSHVFGSNTALFEQFVLWKNIMGPCWLKIEDADFDKL-KNASHCKLEVLADHPNMVSVLS 519
Query: 565 VCGN----------VLSRTLMGGRSERNEFLLLHA 589
N V RT R + E L + A
Sbjct: 520 ESDNLDAPPLTLMSVSLRTAFNERDNKQEILAISA 554
>gi|313241438|emb|CBY33693.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/350 (52%), Positives = 240/350 (68%), Gaps = 34/350 (9%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++ITN+CGN+LSRTL GR+ERN +LLLHAFH+K ++ P K ++G++ G
Sbjct: 249 VQITNICGNILSRTLSRGRAERNAYLLLHAFHKKDHLPPPPYKKKTVEDGDKKG------ 302
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
++GG+VLEPKKG Y +I+L+DFNSLYPSIIQEYNICFTT ++ D
Sbjct: 303 ----PKFAGGMVLEPKKGLYTNYILLLDFNSLYPSIIQEYNICFTTTAMQAPPD------ 352
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
LP+ ++ GILP EIKKLV R++VK L+K ++D L + +IRQ LKLTANSMY
Sbjct: 353 ---LPK-TMEEGILPFEIKKLVNRRKEVKKLIKNEK-NADELARLNIRQLGLKLTANSMY 407
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLGF SRF AQPLAALVTAKGREIL TK VE +N EV+YGDTDS+MI+ N +
Sbjct: 408 GCLGFTASRFCAQPLAALVTAKGREILEATKVFVEKMNLEVVYGDTDSIMINSNSTNISE 467
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGV 859
V K+GN +K E NK Y+ LE+DIDG YK MLLLKKKKYAA+ NGK +E KG+
Sbjct: 468 VMKLGNLVKKEVNKHYRLLEIDIDGAYKSMLLLKKKKYAAID----QNGK----EEFKGL 519
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
D+VRRDWS++A G+ ++ +L EQ ++ ++ IHEH++ I T+
Sbjct: 520 DIVRRDWSEIARNEGRTILKLLLHEQDE-----EEGVRKIHEHLEMIGTE 564
>gi|403223257|dbj|BAM41388.1| DNA polymerase [Theileria orientalis strain Shintoku]
Length = 1528
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 211/531 (39%), Positives = 304/531 (57%), Gaps = 77/531 (14%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+T GN SR+L RSER ++LL+H F+ Y+L D + KN + + + +K +G+
Sbjct: 719 LTTTAGNTWSRSLQCARSERIDYLLMHEFYHNKYIL-DHIFEKNAYK-DNYQDDDKNEGK 776
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM----------- 670
K +Y GGLV EP+ G YD FI+L+DFNSLYPSIIQEYNICFTT V+
Sbjct: 777 KGNSYEGGLVFEPRSGLYDNFILLLDFNSLYPSIIQEYNICFTTTYVKTEYGNEGNQREL 836
Query: 671 ----------LQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQV-KALMKQPNLSSD 719
++S++ L E GILPS +K+LVE R ++ KA+ + N
Sbjct: 837 NENEGEDGGNSRESEVVILDE--------VGILPSVLKRLVELRIKIKKAIGTETNELRK 888
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-NY 778
Q RQ ALKL ANS+YGC+G SRF + +A+ +T +GR +L +TK VEN+ N
Sbjct: 889 --SQLKTRQLALKLIANSIYGCIGSTYSRFHCKYIASYITQQGRNLLKSTKEKVENVFNL 946
Query: 779 EVIYGDTDSLMISCNVND------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLL 832
VIYGDTDSLMI+ N+ D Y++ +I + + NK +K+LE+ IDGV+ +LLL
Sbjct: 947 NVIYGDTDSLMINTNIRDDGNATNYNAANQIAVNLVNFINKSHKKLEIGIDGVFNRLLLL 1006
Query: 833 KKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KKKKYA+L + + + + +EIKG+D +RRDWS L E G ++ IL+ Y
Sbjct: 1007 KKKKYASLKVGNVVDYENNVFHREIKGLDFIRRDWSLLTKEVGNQLLKIILNSNYYN--G 1064
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D +Q IH ++ I L++ + LT ITKQLTK P+EY+D + LPHV VALRLN
Sbjct: 1065 VDGIVQEIHSTLQNINQQLNDQSIELTKYLITKQLTKNPKEYSDIQNLPHVSVALRLNEK 1124
Query: 952 NSKKLKQGDTISYIICEDGTSEA--------------------------------ATQRA 979
G +SYI+C +S+A +QRA
Sbjct: 1125 GITNYTAGHEVSYIVCTKESSKAYHESTNKEKEEEESKYGKESTKEKKGASRVDNLSQRA 1184
Query: 980 YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDT 1030
+NI E+K ++ L++D++YY +QQ+ P + RL IEGTDA R+++CL ++T
Sbjct: 1185 FNINEVKEHN-LEVDIHYYKTQQLLPPIIRLCSIIEGTDAQRLSKCLQVET 1234
Score = 48.9 bits (115), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 398 GTVYLFGKVFVKENNSHSSCCVI-VQNIDRKIYLLPRSEHL---------KTKEPVS--- 444
G ++LFG++ K + C+I V+N+ R ++ PR + T+E S
Sbjct: 284 GHLHLFGRM--KTTGVETETCMITVKNMMRNLFFKPRMDLAFNETGELINSTRETSSTDY 341
Query: 445 ---------------IAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEV 489
+ + E + I Y I K + +++ P +L Y++V
Sbjct: 342 EGIIKKGSELYERYLMMNFFKEMETIRKNYGIKKIKYKLVKRSLLTYGPTNEEL--YIKV 399
Query: 490 RYSAKCPAL-PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWC 548
Y + P + G + ++ ++ +E LL+RKIKGP+WL K S+C
Sbjct: 400 CYPYQSPQIEKRHYCGTYYEDIYNINATQIELFLLKRKIKGPNWLRINNFRKTNDAQSYC 459
Query: 549 KYEVQCNQMEKIRI 562
K E++ + + +++
Sbjct: 460 KIELEIDSYKDVQL 473
>gi|237844121|ref|XP_002371358.1| DNA polymerase alpha catalytic subunit [Toxoplasma gondii ME49]
gi|211969022|gb|EEB04218.1| DNA polymerase alpha catalytic subunit [Toxoplasma gondii ME49]
gi|221506357|gb|EEE31992.1| DNA polymerase alpha catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 2017
Score = 326 bits (835), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 222/625 (35%), Positives = 314/625 (50%), Gaps = 160/625 (25%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKN-------------- 605
+T + GN+ +R+L R+ERN FLLLH FH + ++ PDK Y +
Sbjct: 991 LTTIGGNLWARSLQNQRAERNAFLLLHEFHREKFICPDKDDPYARGAPVRRPHAGPGRGG 1050
Query: 606 ------------------KKEGEETGEANKGK------------------GRKKAAYSGG 629
+ G+E G A +G+ R KA+Y+GG
Sbjct: 1051 PRRGPSASGARDEDPWEVEGGGQEVGVAGEGRDEEEAANEGHREGEEKVGARAKASYAGG 1110
Query: 630 LVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVR------------------ 669
LVLEP+ G YD F++L+DFNSLYPSIIQEYN+CF+T+ PVR
Sbjct: 1111 LVLEPRVGLYDTFVLLLDFNSLYPSIIQEYNVCFSTVKRPVRTRISRVQATNGPDGEIAD 1170
Query: 670 MLQDSDITTLCEYLPEHQVDT-----GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
++ D L + E V G+LP +++LV+ RR VKA MK + Q
Sbjct: 1171 AFREPDDRNL-PHAAEEDVQGIASTPGLLPRILRQLVQRRRAVKASMKGESNPVKRATQ- 1228
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYG 783
+I+Q ALKLTANS+YGCLGF SRF+A+ +AA +T +GR IL+ K VE L EV+YG
Sbjct: 1229 EIKQLALKLTANSIYGCLGFSRSRFYAKEIAAFITQQGRNILMAAKDKVERILRLEVVYG 1288
Query: 784 DTDSLMISCNVND-------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKK 836
DTDS+MI+ ++D Y + ++G Q+K+E NK YK+LE+D++GV++ +LLLKKKK
Sbjct: 1289 DTDSIMINTGLHDDGGEGKTYAAAVRLGEQVKAEINKSYKKLEIDLEGVFRRLLLLKKKK 1348
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL-------------- 882
Y + + K E KG+D+VRRDW++L G ++ I
Sbjct: 1349 YVCCIV--VDYAKRQYKLEQKGLDIVRRDWAKLTKVVGNQLLQIIFRIAQKDAALAPVST 1406
Query: 883 -------DEQSY---TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEE 932
DE++ T Y++D ++ +HE ++++ L G VPL ITK LTK P+
Sbjct: 1407 PAADASKDEKAKSNETKYAVDTVVEELHEKLREVGKQLRAGGVPLEFFVITKALTKPPQM 1466
Query: 933 YTDRKA----LPHVQVALRLNNTNSKKLKQGDTISYIIC--------------------- 967
Y PHVQVALR+ + +K G+ I Y+IC
Sbjct: 1467 YARGAGGAIMHPHVQVALRM-QSRGLSVKPGNEIPYVICSEASVRAFLAAKSEAEGGKGG 1525
Query: 968 ------EDGTSEAAT---------------QRAYNIEELKNNSKLKIDVNYYLSQQIHPV 1006
E G EA T +RA++ E+ N LKID YYL QQ+ P
Sbjct: 1526 EPGAGQEAGNREADTAEKAKEGRSGPLSPAERAFHPREVAGNPLLKIDAEYYLEQQLLPP 1585
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTS 1031
+ R+ +EGT A R+AECLGLD S
Sbjct: 1586 IQRMCAFVEGTSASRLAECLGLDGS 1610
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 110/258 (42%), Gaps = 66/258 (25%)
Query: 366 ADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFV------KENNSHS---- 415
+D+ LP+ D +FLDA+E+ GT+YLFGKV+ KE +
Sbjct: 425 SDNQLPVCED----GTLPFYFLDAWEEA----GTLYLFGKVWPAAAKREKEGAEGTIPQK 476
Query: 416 -------SCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSE----------------- 451
SCCV+V+++ ++ R + T + + SE
Sbjct: 477 YRGCPPQSCCVVVRDMMVPLFFRTREQVEITSSLAGLLEGESEENPKDDADASEEREQEL 536
Query: 452 ------------------FDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSE--YLEVRY 491
++ +Y+ + + + YAF+ P VP +++V
Sbjct: 537 RRRVERRMEITKAFFKQDLPKLKQKYRWRKVAIKGVFRHYAFDAPDVPRGRNQTFVKVFV 596
Query: 492 SAKCPAL-PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI---SW 547
A P L P DL G+T+SHVFG S +E LL++R+IKGP WL + S SW
Sbjct: 597 PASAPTLNPEDLEGETYSHVFGVGQSLIELLLVKRRIKGPCWLRIENFSRPASAFEHSSW 656
Query: 548 CKYEVQCNQMEKIRITNV 565
C++EV + + +R+ N
Sbjct: 657 CQHEVYIHSHKDVRLWNA 674
>gi|145521204|ref|XP_001446457.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413935|emb|CAK79060.1| unnamed protein product [Paramecium tetraurelia]
Length = 1344
Score = 325 bits (833), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 213/583 (36%), Positives = 318/583 (54%), Gaps = 88/583 (15%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++TN+CGNV +R+L+ R+ERNE LL+H F + ++LPDK N + E+ + + +
Sbjct: 628 QLTNICGNVWNRSLLNQRAERNEMLLMHEFFLRGFLLPDKMSKINLSDEEKDQQIKEQES 687
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------------- 666
+K Y GGLV EPK Y ++++L+DFNSLYPSII EYNICFTT+
Sbjct: 688 KK--TYGGGLVFEPKADIYTQYVLLLDFNSLYPSIIMEYNICFTTVQRDKINFEVDKTQL 745
Query: 667 ---PVR--------------MLQDSDITT--LCEYLPEHQVD--TGILPSEIKKLVESRR 705
P + QD + T + +++ D +GILP I+KLV R+
Sbjct: 746 EEEPTQTKPQKSNKNKKKKDQTQDENDTKEKIKDFIGSVDPDAGSGILPQIIEKLVNMRK 805
Query: 706 QVKALMKQPNLSSDLLMQ-YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGRE 764
Q K M + S+ L+ Q Y+I+Q A+KL ANS+YGCLGF +SRF+A +A+L+T KGR
Sbjct: 806 QAKKEMSR---STGLMKQIYNIKQLAVKLVANSIYGCLGFSSSRFYAVGIASLITQKGRS 862
Query: 765 ILLNTKSLVENLNYEVIYGDTDSLMISCNV-NDYDSVFKIGNQIKSECNKLYKQLELDID 823
IL+++K+ VE N +VIYGDTDS+MI + + +G QI E NK YK+L L ID
Sbjct: 863 ILMDSKNTVERSN-DVIYGDTDSMMICARQEKNLSEILVLGTQIAKEINKKYKKLVLAID 921
Query: 824 GVYKYMLLLKKKKYAALSISKLSNGKMICSQ--------EIKGVDVVRRDWSQLASEAGK 875
GV+ +LL+KKKKYA + I L + ++ Q E+KG+D+VRR++ ++ +
Sbjct: 922 GVFDTLLLMKKKKYAGIKIDNLED--LMTGQTEQPKFKMEVKGIDIVRREFCDISKKMQS 979
Query: 876 FVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD----------------NGF----V 915
V+ +L ++ D D + M++IR+ D N F +
Sbjct: 980 HVLDILLKTKNRDDIHGD-----LITLMQEIRSMFDALSGNSNADPKQLIAQNRFITYEI 1034
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ--GDTISYIICEDGTSE 973
P + I KQL KAP EY+D + PHVQVALR+ N + + I Y+ICED T +
Sbjct: 1035 PTSDFIIVKQLNKAPHEYSDTISAPHVQVALRMVNEYGRSAQSLVNHFIRYVICEDPTQK 1094
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+ RAY ++EL N + L ID YYLS QI + RL + ++ +A+ LGL T Y
Sbjct: 1095 NLSFRAYTVDELINKN-LTIDYYYYLSTQIFDPIVRLCKNVQVISISELAQILGLKTYQY 1153
Query: 1034 RSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ 1076
+ ++ + E ++ + D F+F C P CK+
Sbjct: 1154 KDKVNHEFID-----FKLEEEQKQELIIIDSFKFKC--PVCKE 1189
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPV 443
+++D +ED + PG++++FGKV + N + SC + ++ + YL + ++ +
Sbjct: 218 FYWIDIYEDQIRFPGSLFVFGKVKNHKLNVYDSCSLYFEDYRKTAYLSYENGRYTEQQLI 277
Query: 444 SIAQVYSEFDQIATQYKIL-----DFKSRKIEKKYAFNLPGVP-DLSEYLEVRYSAK-CP 496
Q A K+L DF + ++++YAF + +P +YLEV Y+ K
Sbjct: 278 QECQ--------ALMKKVLGLGSKDFTYQFVDRQYAFEIADIPTSQQQYLEVSYTLKHGQ 329
Query: 497 ALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSR 544
LP + F + + + +E L+ KI+GP WL+ + ++
Sbjct: 330 QLPVRIDNPIFKYALQSTQTLVEQFLIYNKIRGPCWLQLKSCQTIDTK 377
>gi|399216012|emb|CCF72700.1| unnamed protein product [Babesia microti strain RI]
Length = 1466
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 210/509 (41%), Positives = 300/509 (58%), Gaps = 44/509 (8%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+T + GN+ S +L RSERN+ LLLH FH YV+ + + K+K K
Sbjct: 717 LTCIAGNLWSHSLACMRSERNDMLLLHEFHRLKYVISN-SFQKHKD--------TKSAAT 767
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCE 681
KK +Y GGLVLEP G YD FI+L+DFNSLYPSIIQE+N+CFTT + + D + E
Sbjct: 768 KKGSYEGGLVLEPILGLYDTFILLLDFNSLYPSIIQEFNVCFTTAVISPIVDHNNNLQVE 827
Query: 682 YLPEHQVDTGILPSEIKKLVESRRQVKA-LMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+ + G+LP+ +K+LVE R +K+ +M + N S Q +RQ ALKL ANS+YG
Sbjct: 828 TI---STEPGVLPAVLKRLVEMRATIKSSMMSEKN--SQKKAQLHVRQLALKLIANSLYG 882
Query: 741 CLGFPNSRFFAQPLAALVTAKG-------REILLNTKSLVEN-LNYEVIYGDTDSLMISC 792
CLG P SRF AQ LAA +T +G R IL++TK +E+ +VIYGDTDSLM++
Sbjct: 883 CLGSPYSRFHAQHLAAFITLQGKSVGYSGRNILMDTKEKLESEFKLQVIYGDTDSLMLNT 942
Query: 793 NVN------DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
N+ ++ ++ + NK Y++LE+++D ++ +LLLKKKKYAAL + +
Sbjct: 943 NIRHDGRLESFNKANQLATILSGSINKKYRKLEIELDAIFARLLLLKKKKYAALKV--ID 1000
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
G+ + KG+D VRRDWS L E G +++ IL ++ D +D+ ++ IHE + +
Sbjct: 1001 YGQKKLEIDSKGLDFVRRDWSLLTKEIGDKILN-ILFTANFGDNGIDEAIEKIHELLTYL 1059
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++D+ VPL ITKQL + PEEY+D ALPHV VALR+N + ++ G IS+II
Sbjct: 1060 CGEMDSDRVPLESYTITKQLNRNPEEYSDASALPHVSVALRVNKQGKRTIRAGQDISFII 1119
Query: 967 C----------EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
C + T +QRA+ IEE+K LK D+ YY S Q+ P V RL IEG
Sbjct: 1120 CSKQSIEKIKGKGDTINLLSQRAFTIEEVKELG-LKPDLEYYKSVQLLPPVIRLCGNIEG 1178
Query: 1017 TDAVRIAECLGLDTS-LYRSQIKESIQQS 1044
T++ R+ CLGL + Y + E +Q S
Sbjct: 1179 TNSQRLGRCLGLAINESYEKREGEGVQHS 1207
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 37/264 (14%)
Query: 310 IEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTADDS 369
I + V+++N +++ + + ++KE+ E + P+V T D++
Sbjct: 222 IHDSVEISNTDNIGIDQDF------HIYDRKEYVIVEI----NDAEIDYPKVQLDTPDEN 271
Query: 370 L---PLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKV----FVKENNSHSSCCVIVQ 422
+ P K ++ LD ED G Y+FGK + ++ +SCC+IV
Sbjct: 272 INVKPTDIYLLEDKFIGIYCLDLQEDF---KGNFYIFGKAITSPYTADSVDTASCCIIVT 328
Query: 423 NIDRKIYLLPRSEH---LKTKEPVSIAQ-----------VYSEFDQIATQYKILDFKSRK 468
R +Y R + ++ E V AQ Y E + + Y I +
Sbjct: 329 ECMRDLYFKVRMDMKFTIENSETVIDAQNSLYQKMIMKGFYKELQTLKSHYGIQKVMFKL 388
Query: 469 IEKKYAFNLPGVPDLSEYLEVRYSAKCPAL-PSDLSGDTFSHVFGTKSSFLENLLLERKI 527
+ +K N P + +++V Y P + P SG ++ ++G SS +E ++RKI
Sbjct: 389 VWRKILQNGPCGQQM--FIKVCYPYSSPEIRPEHYSGIHYTDIYGLNSSLVERFAVKRKI 446
Query: 528 KGPSWLEFPEAEKFPSRISWCKYE 551
KGP WL+ +A+ IS C++E
Sbjct: 447 KGPCWLKIRDAKLVKDNISRCQFE 470
>gi|221485502|gb|EEE23783.1| DNA polymerase alpha catalytic subunit, putative [Toxoplasma gondii
GT1]
Length = 2017
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 221/625 (35%), Positives = 314/625 (50%), Gaps = 160/625 (25%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKN-------------- 605
+T + GN+ +R+L R+ERN FLLLH FH + ++ PDK Y +
Sbjct: 991 LTTIGGNLWARSLQNQRAERNAFLLLHEFHREKFICPDKDDPYARGAPVRRPHAGPGRGG 1050
Query: 606 ------------------KKEGEETGEANKGK------------------GRKKAAYSGG 629
+ G++ G A +G+ R KA+Y+GG
Sbjct: 1051 PRRGPSASGARDEDPWEVEGGGQDVGVAGEGRDEEEAANEGHREGEEKVGARAKASYAGG 1110
Query: 630 LVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRM----------------- 670
LVLEP+ G YD F++L+DFNSLYPSIIQEYN+CF+T+ PVR
Sbjct: 1111 LVLEPRVGLYDTFVLLLDFNSLYPSIIQEYNVCFSTVKRPVRTRISRVQATNGPDGEIAD 1170
Query: 671 -LQDSDITTLCEYLPEHQVDT-----GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
++ D L + E V G+LP +++LV+ RR VKA MK + Q
Sbjct: 1171 GFREPDDRNL-PHAAEEDVQGIASTPGLLPRILRQLVQRRRAVKASMKGESNPVKRATQ- 1228
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYG 783
+I+Q ALKLTANS+YGCLGF SRF+A+ +AA +T +GR IL+ K VE L EV+YG
Sbjct: 1229 EIKQLALKLTANSIYGCLGFSRSRFYAKEIAAFITQQGRNILMAAKDKVERILRLEVVYG 1288
Query: 784 DTDSLMISCNVND-------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKK 836
DTDS+MI+ ++D Y + ++G Q+K+E NK YK+LE+D++GV++ +LLLKKKK
Sbjct: 1289 DTDSIMINTGLHDDGGEGKTYAAAVRLGEQVKAEINKSYKKLEIDLEGVFRRLLLLKKKK 1348
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL-------------- 882
Y + + K E KG+D+VRRDW++L G ++ I
Sbjct: 1349 YVCCIV--VDYAKRQYKLEQKGLDIVRRDWAKLTKVVGNQLLQIIFRIAQKDAALAPVST 1406
Query: 883 -------DEQSY---TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEE 932
DE++ T Y++D ++ +HE ++++ L G VPL ITK LTK P+
Sbjct: 1407 PAADASKDEKAKSNETKYAVDTVVEELHEKLREVGKQLRAGGVPLEFFVITKALTKPPQM 1466
Query: 933 YTDRKAL----PHVQVALRLNNTNSKKLKQGDTISYIIC--------------------- 967
Y PHVQVALR+ N +K G+ I Y+IC
Sbjct: 1467 YARGAGGAIMHPHVQVALRMQN-RGLSVKPGNEIPYVICSEASVRAFLAAKSEAEGGKGG 1525
Query: 968 ------EDGTSEAAT---------------QRAYNIEELKNNSKLKIDVNYYLSQQIHPV 1006
E G EA T +R+++ E+ N LKID YYL QQ+ P
Sbjct: 1526 EPGAGQEAGNREADTAEKAKEGRSGPLSPAERSFHPREVAGNPLLKIDAEYYLEQQLLPP 1585
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTS 1031
+ R+ +EGT A R+AECLGLD S
Sbjct: 1586 IQRMCAFVEGTSASRLAECLGLDGS 1610
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 66/258 (25%)
Query: 366 ADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFV------KENNSHS---- 415
+D+ LP+ D +FLDA+E+ GT+YLFGKV+ KE +
Sbjct: 425 SDNQLPVCED----GTLPFYFLDAWEEA----GTLYLFGKVWPAAAKREKEGAEGTIPQK 476
Query: 416 -------SCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSE----------------- 451
SCCV+V+++ ++ R + T + + E
Sbjct: 477 YRGCPPQSCCVVVRDMMVPLFFRTREQVEITSSLAGLLEGEGEENPKDDADASEEREQEL 536
Query: 452 ------------------FDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSE--YLEVRY 491
++ +Y+ + + + YAF+ P VP +++V
Sbjct: 537 RRRVERRMEITKAFFKQDLPKLKQKYRWRKVAIKGVFRHYAFDAPDVPRGRNQTFVKVFV 596
Query: 492 SAKCPAL-PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI---SW 547
A P L P DL G+T+SHVFG S +E LL++R+IKGP WL + S SW
Sbjct: 597 PASAPTLNPEDLEGETYSHVFGVGQSLIELLLVKRRIKGPCWLRIENFSRPASAFEHSSW 656
Query: 548 CKYEVQCNQMEKIRITNV 565
C++EV + + +R+ N
Sbjct: 657 CQHEVYIHSHKDVRLWNA 674
>gi|401412836|ref|XP_003885865.1| putative DNA polymerase alpha catalytic subunit [Neospora caninum
Liverpool]
gi|325120285|emb|CBZ55839.1| putative DNA polymerase alpha catalytic subunit [Neospora caninum
Liverpool]
Length = 1999
Score = 320 bits (821), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 221/622 (35%), Positives = 312/622 (50%), Gaps = 157/622 (25%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-------------------- 601
+T + GN+ +R+L R+ERN FLLLH FH + ++ PD++
Sbjct: 976 LTTIGGNLWARSLQNQRAERNAFLLLHEFHREKFICPDREDPYSRGAPNKRPQAGRTAPR 1035
Query: 602 --------YGKNKKEGEETGEANKG----------------------KGRKKAAYSGGLV 631
GK G+E G + G GR KA Y+GGLV
Sbjct: 1036 RWPGAPGGSGKEDDLGDEEGGIDAGLVERRDEDDGLHEGRREGEERGSGRAKANYAGGLV 1095
Query: 632 LEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVR------------------ML 671
LEP+ G YD F++L+DFNSLYPSIIQEYN+CF+T+ PVR L
Sbjct: 1096 LEPRVGLYDTFVLLLDFNSLYPSIIQEYNVCFSTVKRPVRSRHGQTSAACGPDGEHADTL 1155
Query: 672 QDSDITTLCEYLPEHQVDT-----GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
Q+ D T + E V G+LP +++LV+ RR VKA MK Q +I
Sbjct: 1156 QERDEDTSRPHAAEEDVQGIASTPGLLPRILRQLVQRRRAVKASMKGETNPVKRAAQ-EI 1214
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLNYEVIYGDT 785
+Q ALKLTANS+YGCLGF SRF+A+ LAA +T +GR IL TK VE L EV+YGDT
Sbjct: 1215 KQLALKLTANSIYGCLGFSRSRFYAKELAAFITQQGRNILTATKDKVERTLRLEVVYGDT 1274
Query: 786 DSLMISCNVND-------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
DS+MI+ + D Y + ++G Q+K+E NK YK+LE+D++ V++ +LLLKKKKY
Sbjct: 1275 DSIMINTGLRDDGGQGKAYAAAVRLGEQVKAEINKSYKKLEIDLEAVFRRLLLLKKKKYV 1334
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---------------- 882
+ L K E KG+D+VRRDWS+L G ++ QI+
Sbjct: 1335 CCIV--LDYAKRQYKLEQKGLDIVRRDWSKLTKVVGNQLL-QIMFRVGQNAPLPANAEAS 1391
Query: 883 ----DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY---TD 935
+++S + ++D ++ +HE ++++ L G VPL ITK LTK P+ Y T
Sbjct: 1392 SPAKEKESASKDAVDSVVEELHEKLREVAKQLRAGRVPLEFFVITKALTKPPQMYARGTG 1451
Query: 936 RKAL-PHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA-------------------- 974
L PHVQV+LR+ +K G+ I Y+IC + + A
Sbjct: 1452 GAVLHPHVQVSLRM-QAQGLSVKPGNEIPYVICSEASVRAFLASQDAAGDEAETAKRNEQ 1510
Query: 975 -------------------------ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+RA++ E+ N L++DV+YYL QQ+ P + R
Sbjct: 1511 GSPIEEPGKRAEASKNAQGRSGPLSPAERAFHPREVAGNKTLEMDVDYYLEQQLLPPIQR 1570
Query: 1010 LLEPIEGTDAVRIAECLGLDTS 1031
+ +EGT A R+AECLGLD S
Sbjct: 1571 MCAFVEGTSASRLAECLGLDGS 1592
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 60/238 (25%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFV------KENNSHS-------------SCCVIVQNI 424
+FLDA+E+ GT+YLFGKV+ KE S SCCV+V+++
Sbjct: 429 FYFLDAWEEA----GTLYLFGKVWPAAAKPEKEGAEASPSLQKYRGGPPPQSCCVVVRDM 484
Query: 425 DRKIYLLPR--------SEHLKTKEP-----------------------VSIAQVYSEFD 453
++ R S L+ +E ++ A +
Sbjct: 485 MVPLFFRTREQVDMTSSSRLLEGEEEKDGAKASEERERELRRRLERRMEITKAFFKQDLP 544
Query: 454 QIATQYKILDFKSRKIEKKYAFNLPGVPDLSE--YLEVRYSAKCPAL-PSDLSGDTFSHV 510
++ +Y+ + + + YAF+ P VP E +++V A P L P DL G+T+SHV
Sbjct: 545 RLKQKYRWRKVAIKGVFRHYAFDAPDVPRGREQTFVKVFVPASAPPLSPDDLEGETYSHV 604
Query: 511 FGTKSSFLENLLLERKIKGPSWLE---FPEAEKFPSRISWCKYEVQCNQMEKIRITNV 565
FG S +E LL++R+IKGP WL F +SWC++EV + +R+ N
Sbjct: 605 FGVGQSLIELLLVKRRIKGPCWLRIGNFTRPASAFDHLSWCQHEVYIQSHKDVRLWNA 662
>gi|209882968|ref|XP_002142918.1| DNA polymerase family protein [Cryptosporidium muris RN66]
gi|209558524|gb|EEA08569.1| DNA polymerase family protein [Cryptosporidium muris RN66]
Length = 1562
Score = 318 bits (816), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 206/529 (38%), Positives = 302/529 (57%), Gaps = 66/529 (12%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQY---GKNKKEGEETGE-ANK 617
+TN+ G + S++L+ R+ERNE+LLLH FH+ +V PDK NK + + E +
Sbjct: 808 LTNIAGFLWSKSLLNLRAERNEYLLLHEFHQAKFVTPDKITKISSYNKSQSQRLHEDTDT 867
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD-SDI 676
+ + +Y+GGLVLEP G YD+F+IL+DFNSLYPSIIQE+NICFT + + + DI
Sbjct: 868 PEAEDEISYTGGLVLEPLIGLYDRFVILLDFNSLYPSIIQEFNICFTKRNIGKISNIDDI 927
Query: 677 T------------------------------TLCEYLPEHQVDTGILPSEIKKLVESRRQ 706
T +L + D ILP ++ LV R+
Sbjct: 928 TKKSQEVSNLNSEAEIYSDENIFEYQGDIKDSLMNNFGTLKFDKIILPGILESLVRRRKH 987
Query: 707 VKALMKQPNLSS-DLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREI 765
+K ++K N +S +Q +IRQ ALKLTANS+YGCLG+ NSRF+A+ LA+ +T GR+I
Sbjct: 988 IKDILKNLNSTSPSRRLQLEIRQLALKLTANSLYGCLGYKNSRFYARDLASTITLYGRQI 1047
Query: 766 LLNTKSLVEN-LNYEVIYGDTDSLMISCNVND------YDSVFKIGNQIKSECNKLYKQL 818
L + K+ VE+ L +VIYGDTDS+M++ + D Y V K+ NQIK NK YK+L
Sbjct: 1048 LQSAKNKVEDELKLQVIYGDTDSIMVNTGILDEGDGYGYQQVLKLANQIKQSINKDYKKL 1107
Query: 819 ELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVI 878
E+D+D V + +LLLKKKKYA + + L K E KG+D+VRRDWS+L + K ++
Sbjct: 1108 EIDLDDVLQRLLLLKKKKYACVKV--LDYYKRQFKLEYKGLDLVRRDWSKLTRDISKAIL 1165
Query: 879 SQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA 938
+ I + + LD I ++ + L+N + ITK L K P+ Y+D
Sbjct: 1166 NSIFSNKPIEEVILD-----ILTLLEDLNEKLNNKTIEADYFIITKALNKLPQYYSDPFQ 1220
Query: 939 LPHVQVALRLNNTNSKKLKQGDTISYIICED--------------GTSEAATQRAYNIEE 984
LPHV VA RL N+ ++ G ISYIIC + + + +RAY+++E
Sbjct: 1221 LPHVIVAKRLINS-GHPIRPGTEISYIICMEELPNLEISQNSNKPQSGSSLGRRAYSLDE 1279
Query: 985 LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+K + L+ID+ +Y SQQ+ P ++RL PI G + R+A CLGLD+ +
Sbjct: 1280 VKQQN-LEIDIEWYKSQQLLPPISRLCAPIPGLEIYRLASCLGLDSKYF 1327
Score = 119 bits (299), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 22/208 (10%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHS--------SCCVIVQNIDRKIYLLPRSE 435
+ +D ED G +YLFGK+F + ++ S S C+I+QN R +Y+ P+
Sbjct: 300 FYIVDIAEDF--NSGEIYLFGKIFTQNLSNMSNEQMELNESACIIIQNTYRSLYIYPKDA 357
Query: 436 HLKTKEPVSIAQ-VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGV---PDLSEYLEVRY 491
+ + PV I Q V E I +Y I K + + + +AF GV P+ +L+V Y
Sbjct: 358 YPEHPNPVDICQSVAKEMISIRKKYNIPQIKMKPVIRNFAFTQSGVKYGPN-QPFLKVLY 416
Query: 492 SAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS----RISW 547
+K P LP+++ G+TFSH+FG S +EN +++R+IKGPSWL+ + K S R S
Sbjct: 417 PSKNPNLPNNIKGETFSHIFGLNKSLVENFIIKRRIKGPSWLKIMKPYKVVSVGDGRRSQ 476
Query: 548 CKYEVQCNQMEKIRITNVCGNVLSRTLM 575
CK E+ + + IRI N ++S+ L+
Sbjct: 477 CKVEIHVSTWKNIRIWNA---LISKKLL 501
>gi|340504378|gb|EGR30826.1| hypothetical protein IMG5_122980 [Ichthyophthirius multifiliis]
Length = 1254
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 315/557 (56%), Gaps = 83/557 (14%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK------QYG 603
Y +Q Q+ K ++T +CGN +L R+ERNE LLLH F+E +YV PD QY
Sbjct: 544 YHLQIIQLTK-QLTIICGNQWIGSLQNQRAERNEMLLLHKFYELNYVYPDNFKNLNFQYK 602
Query: 604 KNK--KEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
K K E TG + +KK + GG V EP+KG Y+++I+L+DFNSLYPSIIQE+N+
Sbjct: 603 KKMQLKLSENTGSQQQQGKQKKQKFKGGQVFEPQKGLYNEYIVLLDFNSLYPSIIQEFNV 662
Query: 662 CFTTIPVRML---QDSDITT-----LCEYLPEH----------------------QVD-- 689
CFTT + L Q I L E + ++ Q++
Sbjct: 663 CFTTATRKSLSLEQQMQIFIKNKKDLNEQIIQNNQEEEEQYNDIQQDQQNDDQIAQIEKV 722
Query: 690 --TGILPSEIKKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFP 745
+LP ++ LV+ R++VK +K L + L DI+QKA KL ANS+YGCLGF
Sbjct: 723 KYIAVLPGILRDLVDQRKKVKNQLKNAKDQLEKETL---DIKQKAFKLVANSIYGCLGFS 779
Query: 746 NSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGN 805
+SRF+A P+AA +T+KGRE+L ++K +VE++ Y VIYGDTDSLMI N D KI
Sbjct: 780 SSRFYAMPIAAFITSKGREVLFSSKKIVEDMGYNVIYGDTDSLMIRPNTQDLCEAIKIAL 839
Query: 806 QIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL------SNGKMICSQEIKGV 859
+IK E NK YK+L+LDIDGV+K MLL+KKKKYA L + N + I +E+KG+
Sbjct: 840 KIKIEANKQYKKLQLDIDGVFKNMLLIKKKKYATLKVCNWEEAYQNKNIQEITVKELKGI 899
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
D+VRRDWSQ++ +AG V+ IL+ +S +NI ++ ++ ++D + +
Sbjct: 900 DIVRRDWSQISRDAGNKVLDIILNSKSSEQVQ-----ENIITYLTELNKEIDEKRIKPSD 954
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ----GDTISYIICEDGTS--- 972
ITK+LTK ++Y + K +PHV+VA R+ K L G I+YIIC++ +S
Sbjct: 955 YYITKKLTKRIDQYGE-KNIPHVEVASRM--ITEKGLDPQSLVGHIINYIICKNQSSKLI 1011
Query: 973 -EAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
+A + + YN ++ L+ID+ YY QI + R LE IE + ++A
Sbjct: 1012 DKAFSPKEYNDQK----DTLEIDLEYYKKYQIFEPIKRQLEVIENINISQVASIFA---- 1063
Query: 1032 LYRSQIKESIQQSEENI 1048
IK ++ Q++ENI
Sbjct: 1064 -----IKYTVVQTKENI 1075
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Query: 396 QPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQI 455
+PG +Y FGKV + N + SC + ++NI R YLLP SE + T+E + +V+ F
Sbjct: 140 KPGKIYAFGKVKDPQLNKYHSCTIEIENIIRYYYLLPSSEQI-TEEEIK-NEVHQIFKNA 197
Query: 456 ATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKS 515
K +DF + ++K YAF LP ++ ++ S + +L D+ G TF++ G+
Sbjct: 198 QKMSKKVDFVGQFVQKNYAFELPIPKGNQKWYQIMTSYEFESLDPDVKGKTFNYCIGSTY 257
Query: 516 SFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYE 551
S LE+ L++++IKGP W++ + P+ IS K E
Sbjct: 258 SSLESFLIQKRIKGPCWVKMRNIKNTPNLISNRKLE 293
>gi|85000361|ref|XP_954899.1| DNA polymerase alpha, catalytic subunit [Theileria annulata strain
Ankara]
gi|65303045|emb|CAI75423.1| DNA polymerase alpha, catalytic subunit, putative [Theileria
annulata]
Length = 1074
Score = 316 bits (809), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 200/488 (40%), Positives = 286/488 (58%), Gaps = 56/488 (11%)
Query: 572 RTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLV 631
+++M RSER +FLL+H F+ Y+L D + K K++ ++ +Y GGLV
Sbjct: 585 QSIMMCRSERIDFLLMHEFYRNKYIL-DNVFNKFKEQLDDM-----------KSYEGGLV 632
Query: 632 LEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTG 691
EP G YD FI+L+DFNSLYPSIIQEYNICFTT + D D + Q + G
Sbjct: 633 FEPISGLYDNFILLLDFNSLYPSIIQEYNICFTTTVAK---DEDNVVI-------QDNVG 682
Query: 692 ILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFA 751
+LPS +K+LVE R +K ++K + +Q RQ ALKL ANS+YGCLG SRF
Sbjct: 683 VLPSILKRLVELRLNIKNIIKGEK-NEVRRVQLSTRQLALKLIANSIYGCLGSNFSRFHC 741
Query: 752 QPLAALVTAKGREILLNTKSLVENL-NYEVIYGDTDSLMISCNVND------YDSVFKIG 804
+ +A+ +T GRE+L +TK VEN+ N +VIYGDTDSLMI+ N+ D Y++ ++
Sbjct: 742 KYIASYITKLGRELLRSTKEKVENVFNLQVIYGDTDSLMINTNIRDDGNLANYNAANQLA 801
Query: 805 NQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRR 864
N + + NK +K+LE+ ID V+ +LLLKKKKYA+L + + G+ ++EIKG+D +RR
Sbjct: 802 NNLVTFINKSHKKLEIGIDAVFTRLLLLKKKKYASLKVIEYETGQF--AREIKGLDFIRR 859
Query: 865 DWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITK 924
DWS L E G ++ IL+ Y +D +Q IH + + L+N + L+ ITK
Sbjct: 860 DWSLLTKEIGNKLLDIILNSNYYN--GVDGIVQEIHSTLINLNDQLNNNSIELSKFLITK 917
Query: 925 QLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-----------EDGTSE 973
QLTK P+EY+D + LPHV VALRLN G ISYIIC D ++E
Sbjct: 918 QLTKNPKEYSDVQNLPHVSVALRLNEKGHANYSTGHEISYIICTKSSASKFHTNSDNSAE 977
Query: 974 ----------AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIA 1023
+ + RA++ E+ N L++D++YY QQ+ P + RL IEGTD R++
Sbjct: 978 NTSSSGNTGSSLSSRAFSYNEVTENG-LEVDISYYKQQQLLPPILRLCSIIEGTDIQRLS 1036
Query: 1024 ECLGLDTS 1031
CL ++ S
Sbjct: 1037 RCLQIEQS 1044
Score = 66.6 bits (161), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 351 QTEPSTSEPQVHSRTAD-------DSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLF 403
Q++P +S Q++ DSL L D + LD ED G ++LF
Sbjct: 123 QSQPQSSRMQLYKTNYRNTLLYKPDSLTLTED------LAFYLLDLCED----GGYLHLF 172
Query: 404 GKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL----------------KTKEPVSIAQ 447
G++ SC V V+N+ R ++ PR L + +P+ Q
Sbjct: 173 GRM-RSSGTETESCLVTVKNMYRTLFFKPRMNLLFNELGELVDSAAEGVINSSDPLYERQ 231
Query: 448 V----YSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKC-PALPSDL 502
+ ++EF+ + Y I K + +++ P Y++V Y + P L
Sbjct: 232 IMMNFFNEFEVVRKDYGIKKIKYKLVKRSLLTYGPTKQQF--YIKVCYPFQFQPLNKQHL 289
Query: 503 SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
SG + V+ S+ +E LL+R+IKGP+WL + +K + +S+CK EV+ + +++
Sbjct: 290 SGKYYEDVYHNNSTQVELFLLKRRIKGPTWLRISDYQKSANSLSYCKVEVEIESHKNVQL 349
Query: 563 TNVCGN 568
+ N
Sbjct: 350 WHTKNN 355
>gi|156086442|ref|XP_001610630.1| DNA polymerase alpha subunit [Babesia bovis T2Bo]
gi|154797883|gb|EDO07062.1| DNA polymerase alpha subunit, putative [Babesia bovis]
Length = 1483
Score = 313 bits (801), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 199/506 (39%), Positives = 296/506 (58%), Gaps = 50/506 (9%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+TN+ GN+ SR++ RSERN+FLLLH FH Y++ D + + K+ + + + +
Sbjct: 736 LTNIAGNLWSRSVQCARSERNDFLLLHEFHRSKYII-DHHFERFHKQTSDADKDDSDSKK 794
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCE 681
K Y GGLVLEP+ G YD F++L+DFNSLYPSIIQE+N+CFTT V++L+D + L E
Sbjct: 795 KN--YEGGLVLEPETGLYDNFVLLLDFNSLYPSIIQEFNVCFTT--VKLLEDGSVQVLTE 850
Query: 682 YLPEHQVDTGILPSEIKKLVESRRQVKALMK-QPNLSSDLLMQYDIRQKALKLTANSMYG 740
TG+LP +K+LVE R VKA + + N S Q +RQ ALKL ANS+YG
Sbjct: 851 -------TTGMLPQILKRLVELRASVKAAIAVEKNDSRK--AQLGVRQLALKLVANSLYG 901
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNVND--- 796
CLG SRF A+ +AA +T +GR +L +T+ VEN + VIYGDTDSLMI N+ D
Sbjct: 902 CLGSVYSRFHARHMAAYITQQGRLVLQSTRERVENQYSLHVIYGDTDSLMIDTNIRDDGS 961
Query: 797 ---YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICS 853
Y++ +I N + S NK +K+LE+ +D ++ +LLLKKKKYAAL + + I +
Sbjct: 962 ETSYEAAKQIANTLMSSINKSHKKLEIGMDAMFNRLLLLKKKKYAALKV--VDYKSRIFA 1019
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT--DYSLDDRLQNIHEHMKKIRTDLD 911
+EIKG+D +RRDWS L E G +++ IL+++ + +++ ++ IHE ++ + +
Sbjct: 1020 REIKGLDFIRRDWSILTKEVGNALLAIILNDKVNDPEELGVENTVEKIHETLRDVNNKIA 1079
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
G +P IT+QL K P+EY LPHV VALR+N + + G + +IIC +
Sbjct: 1080 EGNIPPKAWIITRQLAKNPQEYGQNNNLPHVTVALRMNESGA-SFSAGHEVPFIICSKES 1138
Query: 972 SE----------------------AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
E + RAY++ E + L+ D+ YY +QQ+ P + R
Sbjct: 1139 IEKLVLQDNAESNEKKTELDVKLRSLCNRAYSLTEFQQKG-LEPDIQYYKTQQLLPPILR 1197
Query: 1010 LLEPIEGTDAVRIAECLGLDTSLYRS 1035
L IEGTD ++A CL + + R+
Sbjct: 1198 LCGVIEGTDPQKLASCLQIQDDVNRT 1223
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 219/523 (41%), Gaps = 104/523 (19%)
Query: 81 DENVYEEVSEKEYTERVLKRQEDDWIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRK 140
+E +YE V+ +EY +R KR+ D++I+ G EIF DD + + D K
Sbjct: 36 NERIYEVVTAEEYKDRTSKRKLDEFIE----------GGEIFSDDDYEYDSESADEDTDK 85
Query: 141 KNKNIQNPNAKG-DIQKLLANMPVKK----KKKEEVQ---------------LNNDDV-L 179
+ Q P+ G I++ + + K+ K +EVQ L+NDD+ +
Sbjct: 86 RQSKRQLPDGYGKSIEQHFSEIARKESMAYKAPKEVQTDKQLMEKLSKFEDDLDNDDMTM 145
Query: 180 ADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKE 239
LS IA ++ + + P P P + P+ P
Sbjct: 146 GSTLSNSANVIAGNFQMRMGYPQGINPGM--PYPYG---MTESVAPVMPYNYATAPAIGM 200
Query: 240 PSPLKDEIKSNDSVMEVEM--NVAEQSKEEPVDDGLW---EQMQIDDWDNSQQTQDVLPE 294
P N + + +M NV Q EE V+ + EQ+ I + ++ E
Sbjct: 201 PQ--------NQAFPQYQMYANVPRQMPEEHVETTVKHTKEQVDIQNITTGIDIDHIIKE 252
Query: 295 ---QAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQ 351
Q KV LQ++ EE V+V ++E + ++ SP
Sbjct: 253 TNSQDKVPLQLDNSIVADFEE-VEVGDMEVI-----VTDSP------------------- 287
Query: 352 TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKEN 411
E ST P+ + D+ LA + LD ED+ G + LFGK+ + N
Sbjct: 288 REGST--PEFEKTISQDNNELA----------FYLLDLHEDV---GGALRLFGKI-RRSN 331
Query: 412 NSHSSCCVIVQNIDRKIYLLPRSE----HL----KTKEPVSIAQVYSEFDQIATQYKILD 463
+S SC + VQ R ++ R + HL + E + Q ++EF+ I Y I
Sbjct: 332 SSTDSCMITVQQFMRCLFFKARMDLELGHLPELESSYERAFMKQFFNEFESIRKSYGIKK 391
Query: 464 FKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSD-LSGDTFSHVFGTKSSFLENLL 522
K + +++K P L Y++V Y + P+L + G+T+S V+G S+ E L
Sbjct: 392 VKYKLVKRKLLTYGPSEEAL--YVKVCYPYQYPSLKQEHFEGETYSDVYGATSTPGELFL 449
Query: 523 LERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNV 565
++RKIKGPSWL EA RI+ CK+E + + + + + N+
Sbjct: 450 VKRKIKGPSWLRITEARMSKERITTCKHEFEIDSHKNVELWNI 492
>gi|4808579|gb|AAD29860.1|AF093136_1 DNA polymerase alpha catalytic subunit [Toxoplasma gondii]
Length = 1690
Score = 310 bits (794), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 228/678 (33%), Positives = 329/678 (48%), Gaps = 175/678 (25%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKN-------------- 605
+T + GN+ +R+L R+ERN FLLLH FH + ++ PDK Y +
Sbjct: 991 LTTIGGNLWARSLQNQRAERNAFLLLHEFHREKFICPDKDDPYARGPPVRRPHAGPGRGG 1050
Query: 606 ------------------KKEGEETGEANKGK------------------GRKKAAYSGG 629
+ G+E G A +G+ R KA+Y+GG
Sbjct: 1051 PRRGPSASGARDEDPWEVEGGGQEVGVAGEGRDEEEAANEGHREGEEKVGARAKASYAGG 1110
Query: 630 LVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRML---------QDSDITT 678
LVLEP+ G YD F++L+DFNSLYPSIIQEYN+CF+T+ PVR D +I
Sbjct: 1111 LVLEPRVGLYDTFVLLLDFNSLYPSIIQEYNVCFSTVKRPVRTRISRVQATNGPDGEIAD 1170
Query: 679 L--------CEYLPEHQVDT-----GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
+ E V G+LP +++LV+ RR VKA MK + Q +
Sbjct: 1171 AFREPDDRNLPHAAEEDVQGIASTPGLLPRILRQLVQRRRAVKASMKGESNPVKRATQ-E 1229
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGD 784
I+Q ALKLTANS+YGCLGF SRF+A+ +AA +T +GR IL+ K VE L EV+YGD
Sbjct: 1230 IKQLALKLTANSIYGCLGFXRSRFYAKEIAAFITQQGRNILMAAKDKVERILRLEVVYGD 1289
Query: 785 TDSLMISCNVND-------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
TDS+MI+ ++D Y + ++G Q+K+E NK YK+LE+D++GV++ +LLLKKKKY
Sbjct: 1290 TDSIMINTGLHDDGGEGKTYAAAVRLGEQVKAEINKSYKKLEIDLEGVFRRLLLLKKKKY 1349
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL----- 892
+ + K E KG+D+VRRDW++L G ++ QI+ + D +
Sbjct: 1350 VCCIV--VDYAKRQYKLEQKGLDIVRRDWAKLTKVVGNQLL-QIIFRIAQKDAAXAPVST 1406
Query: 893 --------------------DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEE 932
L+N + +K ++ G VPL ITK LTK P+
Sbjct: 1407 PAVTLPRTRRRRATRRNMPSTPWLKNSTRNCEKSGSNCGAGGVPLEFFVITKALTKPPQM 1466
Query: 933 YTDRKAL----PHVQVALRLNNTNSKKLKQGDTISYIIC--------------------- 967
Y PHVQVALR+ + +K G+ I Y+IC
Sbjct: 1467 YARGAGGAIMHPHVQVALRM-QSRGLSVKPGNEIPYVICSEASVRAFLAAKSEAEGGKGG 1525
Query: 968 ------EDGTSEAAT---------------QRAYNIEELKNNSKLKIDVNYYLSQQIHPV 1006
E G EA T +RA++ E+ N LKID YYL QQ+ P
Sbjct: 1526 EPGAGQEAGNREADTAEKAKEGRSGPLSPAERAFHPREVAGNPLLKIDAEYYLEQQLLPP 1585
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQS------------EENILGVGEA 1054
+ R+ +EGT A R+AECLGLD S + ++++ +I ++ EE I+ +
Sbjct: 1586 IQRMCAFVEGTSASRLAECLGLDGSKH-TRLEGTIGETDDCSRDAREKAGEERIMALISK 1644
Query: 1055 EEVKYQFCDKF--EFTCM 1070
E KY+ +F C+
Sbjct: 1645 SEEKYKMVSSTGKDFCCV 1662
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 110/258 (42%), Gaps = 66/258 (25%)
Query: 366 ADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFV------KENNSHS---- 415
+D+ LP+ D +FLDA+E+ GT+YLFGKV+ KE +
Sbjct: 425 SDNQLPVCED----GTLPFYFLDAWEEA----GTLYLFGKVWPAAAKREKEGAEGTIPQK 476
Query: 416 -------SCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSE----------------- 451
SCCV+V+++ ++ R + T + + SE
Sbjct: 477 YRGCPPQSCCVVVRDMMVPLFFRTREQVEITSSLAGLLEGESEENPXDDADASEEREQEL 536
Query: 452 ------------------FDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSE--YLEVRY 491
++ +Y+ + + + YAF+ P VP +++V
Sbjct: 537 RRRVERRMEITKAFFKQDLPKLKQKYRWRKVAIKGVFRHYAFDAPDVPRGRNQTFVKVFV 596
Query: 492 SAKCPAL-PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI---SW 547
A P L P DL G+T+SHVFG S +E LL++R+IKGP WL + S SW
Sbjct: 597 PASAPTLNPEDLEGETYSHVFGVGQSLIELLLVKRRIKGPCWLRIENFSRPASAFEHSSW 656
Query: 548 CKYEVQCNQMEKIRITNV 565
C++EV + + +R+ N
Sbjct: 657 CQHEVYIHSHKDVRLWNA 674
>gi|71027153|ref|XP_763220.1| DNA polymerase alpha [Theileria parva strain Muguga]
gi|68350173|gb|EAN30937.1| DNA polymerase alpha, putative [Theileria parva]
Length = 1451
Score = 306 bits (783), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 211/567 (37%), Positives = 305/567 (53%), Gaps = 82/567 (14%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET----GEANK 617
+T + GN SR++ RSER +FLL+H F+ Y+L D + K K++ T +
Sbjct: 667 LTIIAGNTWSRSIQCARSERIDFLLMHEFYRNKYIL-DNVFNKFKEQSITTLGFYFYIHF 725
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
+Y GGLV EP G YD FI+L+DFNSLYPSIIQEYNICFTT + I
Sbjct: 726 THLDDTKSYEGGLVFEPISGLYDNFILLLDFNSLYPSIIQEYNICFTTTVANGEESVVIL 785
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
+ G+LPS +K+LVE R +K ++K + +Q RQ ALKL ANS
Sbjct: 786 D----------NVGVLPSILKRLVELRLNIKNIIKGEK-NETRRVQLSTRQLALKLIANS 834
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKG-------------------REILLNTKSLVENL-N 777
+YGCLG SRF + +A+ +T G RE+L +TK VEN+ N
Sbjct: 835 IYGCLGSNFSRFHCKYIASYITKLGTASRAGNYPIPHFTTYLHSRELLRSTKEKVENVFN 894
Query: 778 YEVIYGDTDSLMISCNVND------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLL 831
+VIYGDTDSLMI+ N+ D Y++ ++ N + + NK +K+LE+ ID V+ +LL
Sbjct: 895 LQVIYGDTDSLMINTNIRDDGNLTNYNAANQLANNLVTFINKSHKKLEIGIDAVFTRLLL 954
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
LKKKKYA+L + +G+ +EIKG+D +RRDWS L E G +++ IL+ Y
Sbjct: 955 LKKKKYASLKVVDYGSGQF--EREIKGLDFIRRDWSLLTKEIGNKLLNIILNSNYYD--G 1010
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D +Q IH + + L+N + L+ ITKQLTK P+EY+D + LPHV VALRLN
Sbjct: 1011 VDGIVQEIHSTLINLNEQLNNQSIELSKFLITKQLTKNPKEYSDVQNLPHVSVALRLNEK 1070
Query: 952 NSKKLKQGDTISYIIC---------------EDGTSE-----------AATQRAYNIEEL 985
G ISYIIC +D ++E + + RA++ E+
Sbjct: 1071 GLGNYSTGHEISYIICTKSSATKFHTNTTSDKDNSAENNVNSSGNIGGSLSFRAFSYNEV 1130
Query: 986 KNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQ--------- 1036
N L++D++YY QQ+ P + RL IEGTD R++ CL ++ S+ +Q
Sbjct: 1131 MENG-LEVDISYYKQQQLLPPILRLCSIIEGTDIQRLSRCLQIEKSIAVTQEYNYEQESK 1189
Query: 1037 IKESIQQSEENILGVGEAEEVKYQFCD 1063
+ I++S EN V ++ Q C+
Sbjct: 1190 VLSLIKRSHENYRDVEINSQLSCQHCN 1216
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 37/236 (15%)
Query: 348 EAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVF 407
E + + S PQ T D+L L+ D + LD ED G + LFG++
Sbjct: 218 EDVVIDSGQSPPQY---TQPDALTLSED------LAFYLLDLCED----GGYLQLFGRIR 264
Query: 408 VKENNSHSSCCVIVQNIDRKIYLLPRSEHL----------------KTKEPVS----IAQ 447
++ SC V V+N+ R ++ PR + L K+ +P+ +
Sbjct: 265 TSGTDT-ESCMVTVKNMYRSLFFKPRMDLLFNELGEVVETASDGVIKSSDPLYERHLMMN 323
Query: 448 VYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPAL-PSDLSGDT 506
++EF+ I Y I K + +++ P P+ Y++V Y + L LSG
Sbjct: 324 FFNEFEVIRKDYGIKKIKYKLVKRSLLTYGPTKPEF--YIKVCYPFQFQILNKQHLSGKF 381
Query: 507 FSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
+ V+ S+ +E LL+R+IKGP+WL + +K +S+CK E++ + + +++
Sbjct: 382 YEDVYHNHSTQVELFLLKRRIKGPTWLRLTDYQKSTDSLSYCKVEIEIDSHKNVQL 437
>gi|449016652|dbj|BAM80054.1| DNA polymerase alpha, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1527
Score = 300 bits (769), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 246/793 (31%), Positives = 359/793 (45%), Gaps = 163/793 (20%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKS-YVLPDKQYGK---------------- 604
+ ++CG +T++G R+ER E+LLLH H YV PD+ G+
Sbjct: 779 LASICGYPWGKTMLGNRAERIEYLLLHEIHRSGKYVAPDRSSGQRASIRPKRPSFDPTAQ 838
Query: 605 --------------NKKEGEETGEANKGKG--------RKKAAYSGGLVLEPKKGFYDKF 642
+ + G T +G R+K AY GG VLEPK+G Y
Sbjct: 839 ASADKRLDAARTPSSTQRGASTPTTTEGSALELASSAKRRKPAYQGGYVLEPKRGLYGTC 898
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPS------- 695
++ +DF+SLYPSIIQEYNI FTT+ + DS+ L LP+H + GILP+
Sbjct: 899 VLQLDFSSLYPSIIQEYNIDFTTVTL----DSEGNAL---LPKHSNELGILPTVLRRLVQ 951
Query: 696 EIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
+++ E+ R + ++Q Q RQ ALKLTAN++YGCLG+ +SRF + LA
Sbjct: 952 RRRQVREAARNESSPVRQ--------QQLHTRQLALKLTANALYGCLGYVHSRFHIRELA 1003
Query: 756 ALVTAKGREILLNTKSLVE---------------------NLNYEVIYGDTDSLMISCNV 794
L+T GRE L T L E + VIYGDTDS+ I +
Sbjct: 1004 ELITRTGRETLERTVELAEQVLLRKLDDLVAASNVPDRASGVQPRVIYGDTDSIFIDSGI 1063
Query: 795 ----NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ + ++G+ I+ E NK Y LE++I+ +Y MLLL KKKYAAL ++ G
Sbjct: 1064 PFSSDSVQRIMELGHAIRREVNKQYHTLEIEIEALYVRMLLLNKKKYAALKY-QIDTGSF 1122
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
S+E+KG++VVR DW L + AG F + QILD + D I +++ ++ T +
Sbjct: 1123 --SKEVKGIEVVRHDWCALVAAAGNFALDQILDPTCVATEAKD----RICKYLSELATRM 1176
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE-- 968
G V L ITKQLT P+ Y D PHVQVALR + G I Y++C
Sbjct: 1177 RQGRVDLDQFVITKQLTHDPDAYDDAAIQPHVQVALR-RRERGYVVAAGTFIQYVVCREP 1235
Query: 969 -----------DGTS---EAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLLEP 1013
DG + +RA + +E + L +D+++YL Q+H V+ R+ E
Sbjct: 1236 CDTRLRRGEAIDGARAPIDTVARRACHPDEYREAQGMLHLDIDWYLENQLHAVLRRITES 1295
Query: 1014 IEGTDAVRIAECLGLDTSLY-RSQI---------KESIQQSEENILGVGEAEEVKYQFCD 1063
+ G DA +A CLGL+ + R++I S Q +L E++ D
Sbjct: 1296 VPGLDAAALACCLGLNAQPFLRARIMADQMTPGSTASSQDQRRKLL----VEDLFGALSD 1351
Query: 1064 KF--EFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPEC-KVPPYTYLPHLINKLSQ 1120
FT P+C Q ++ +D C P C V P T L +L
Sbjct: 1352 PLVVPFTAQCPACDQRFPIDFRFEGEHIRPAIHIDRCPRPACGAVIPVTVLKQ---QLIV 1408
Query: 1121 DMNKYIVKYY---------------EGWLKCEDPGCSDLTRRCPLGLKTRLCTTCHKYKL 1165
+ I +YY + WL +D SD+T PL ++ L +
Sbjct: 1409 FIRHVIRRYYTSPELLRGHACRAADDDWLAHQD---SDVT-SFPLSSESLL----QEGIS 1460
Query: 1166 HRVYTELQLYQQLSFFHYICDITKALTK-SDTPSIKFDS--ETYMGYCKMKQHVERFLES 1222
R Y E LY QL AL K SD P + S ++ V+ +L++
Sbjct: 1461 EREYGERTLYAQLERLQL------ALGKNSDDPDAEKPSGGSASTAAVALQALVQSYLDA 1514
Query: 1223 SAYNIVDLKKLFS 1235
AY V+L+ LFS
Sbjct: 1515 CAYQYVELRALFS 1527
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 31/205 (15%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPR---------- 433
F LD E + K V++FG+ + E +S ++ CV V I+R+I+ LPR
Sbjct: 319 FFALDMQEILDK----VFVFGRALLPETSSSTAVCVQVCGIEREIFFLPRMYVDCPDDEQ 374
Query: 434 ----------SEHLKTKEPVS----IAQVYSEFDQIATQYKILDFKSRKIEKKYAFNL-- 477
SE P+S + VY E + I +F +R+ E+ + N
Sbjct: 375 ATPRPYPILASEQEPRLAPISEGIAFSCVYEEVKSVLLARGITEFTARREERCFLTNQID 434
Query: 478 PGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPE 537
+++ L VRY AK AL + L G TFS + G+++S LEN +LER + GP W++
Sbjct: 435 RRRAEVTSCLRVRYPAKYRALETALEGQTFSQIVGSRNSPLENFILERCVPGPCWVQVSN 494
Query: 538 AEKFPSRISWCKYEVQCNQMEKIRI 562
A + + IS C++ + + + R+
Sbjct: 495 ASRV-TGISSCRWSLNVDSPAQFRV 518
>gi|146164643|ref|XP_001013747.2| DNA polymerase catalytic subunit [Tetrahymena thermophila]
gi|146145697|gb|EAR93502.2| DNA polymerase catalytic subunit [Tetrahymena thermophila SB210]
Length = 1396
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 223/585 (38%), Positives = 323/585 (55%), Gaps = 95/585 (16%)
Query: 550 YEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--------- 600
Y +Q + K ++T++CGN+ +L R+ERNE LLLH F++ +YV PD
Sbjct: 704 YHLQIVPLTK-QLTSICGNIWMGSLQNQRAERNEMLLLHKFNQLNYVYPDNFKNLPESYK 762
Query: 601 ------QYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPS 654
Q K +E E+ + NK +K+ Y GG V EP+KG Y+++I+L+DFNSLYPS
Sbjct: 763 KKHKNAQIRKQYEEDEDQAQGNKNPKKKENKYKGGQVFEPEKGLYNEYIVLLDFNSLYPS 822
Query: 655 IIQEYNICFTT-----IPVRM------------LQDS---------------------DI 676
IIQE+N+CFTT IP+ M +Q S I
Sbjct: 823 IIQEFNVCFTTCVRDPIPLEMQMAPFLGNKKAAIQYSKNQNTKENKMQDEDEEDNENEQI 882
Query: 677 TTLCEYLPEHQVDTGI--LPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
+ LP +V GI LPS ++ LVE R+ VK +K ++ DI+QKA KL
Sbjct: 883 VQTHDVLPTIEVIKGIAPLPSILQYLVEQRKVVKNQIKGQK-DPQVIETLDIKQKAFKLV 941
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANSMYGCLGF +SRF+A PLA+ +TAKGR IL ++K +VE++ Y VIYGDTDSLMI
Sbjct: 942 ANSMYGCLGFSSSRFYAMPLASFITAKGRHILFDSKKIVEDMGYSVIYGDTDSLMIKPGT 1001
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS-----KLSNGK 849
N++ K G IK + N YK+L+LDIDGV+K MLLLKKKKYA L ++ K +N
Sbjct: 1002 NEFLEAVKTGLSIKIKVNSKYKKLQLDIDGVFKNMLLLKKKKYATLKVANWEEVKNTNAP 1061
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
+EIKG+DVVRRDW QL+ +AG ++ IL+ +S ++ LDD I +++ ++ D
Sbjct: 1062 EKLEKEIKGIDVVRRDWCQLSRDAGNKILEIILESKS-SENMLDD----IKKYLIQLNDD 1116
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ----GDTISYI 965
++ + + ITK+LTK ++Y + K LPHV VA R + K + ISYI
Sbjct: 1117 INQKNIKNSNYYITKRLTKRVDQYGE-KNLPHVAVAQR--SIQEKGIDPQTYVNQIISYI 1173
Query: 966 ICEDGTSE------------------AATQRAYNIEELKNNSK-LKIDVNYYLSQQIHPV 1006
IC++ S+ +AY+ +E SK L+ID+ YY Q+
Sbjct: 1174 ICKNEQSKLFFVDSCMVNIQREKWWLLLVDKAYSPQEFITQSKSLEIDLQYYKRFQLFEP 1233
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGV 1051
+ R+LE IEG + IA L + S+ + ++ + + EN+L +
Sbjct: 1234 IKRMLEVIEGINLQEIASILEVHYSV--QHVSQNNELNAENVLNL 1276
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVS 444
+ D F D +P +Y F KV K+ N+ +C + + I R ++ P S+ V+
Sbjct: 289 YLYDYFYDAQVKPDKIYAFAKVQNKQTNAFDTCVIQIDTIIRNLFFYPSSD------TVT 342
Query: 445 IAQVYSEFDQI----ATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
Q+ +E ++ T K ++F ++K YAF LP S + +V S + +
Sbjct: 343 EQQIKNEIAELLKKEQTSRKNVEFLGAFVDKNYAFELPIPRGKSRWYQVVMSYEYEVISP 402
Query: 501 DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCN 555
D G FS+ G+ S LE L+ +KI GPSW+ F + S I+ K E + +
Sbjct: 403 DTKGQYFSYCVGSTYSALETFLITKKITGPSWVRFQNVKDTTSCITNRKLEFRVD 457
>gi|428671654|gb|EKX72572.1| DNA polymerase family B member protein [Babesia equi]
Length = 1356
Score = 298 bits (763), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/463 (41%), Positives = 274/463 (59%), Gaps = 31/463 (6%)
Query: 584 FLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFI 643
F + H+F Y E ++ NK KG K+ +Y GGLV EP G YD F+
Sbjct: 639 FAVAHSFTNNGYAHSTVNLHNYTDEDDD----NK-KGDKRGSYEGGLVFEPISGLYDNFV 693
Query: 644 ILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVES 703
+L+DFNSLYPSIIQE+NICFTT + ++ + E L + TG+LP +++LV+
Sbjct: 694 LLLDFNSLYPSIIQEFNICFTTAVIE--EEGEGEPKVEILNDV---TGMLPQILRRLVDL 748
Query: 704 RRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGR 763
R VK+++ + +Q +RQ ALKL ANS+YGCLG SRF A+ LAA +T +GR
Sbjct: 749 RFSVKSVLASEK-NEARRIQLGVRQLALKLAANSLYGCLGSVYSRFHAKHLAAYITHQGR 807
Query: 764 EILLNTKSLVEN-LNYEVIYGDTDSLMISCNVND------YDSVFKIGNQIKSECNKLYK 816
+L +TK VEN N +VIYGDTDSLMI+ N+ D +++ + I S NK +K
Sbjct: 808 TVLRSTKEKVENSFNLQVIYGDTDSLMINTNIKDDGQLVNFEAANNLAKTIISTVNKGHK 867
Query: 817 QLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKF 876
+LE+ ID ++ +LLLKKKKYAAL ++ S S+EIKG+D +RRDWS L E G
Sbjct: 868 KLEIGIDAIFNRLLLLKKKKYAALKVNDYSEQNF--SREIKGLDFIRRDWSLLTKEVGNV 925
Query: 877 VISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDR 936
++S IL+ + +D ++ IHE ++ + + +G +P IT+QLTK P+EY D
Sbjct: 926 LLSIILNANYGS--GVDGIVEQIHETLRDVNQRIKDGQIPTKSWLITRQLTKNPKEYADV 983
Query: 937 KALPHVQVALRLNNTNSKKLKQGDTISYIICE--------DGTSEAATQRAYNIEELKNN 988
LPHV VALRLN G +S+IIC G +++ + RA+ + E++
Sbjct: 984 HNLPHVSVALRLNEKGLTNYSAGHEVSFIICSKESIAEIVKGDTKSLSSRAFALSEVEEL 1043
Query: 989 SKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
L D++YY +QQ+ P + RL IEGTDA R+A+CL L++S
Sbjct: 1044 G-LSPDISYYKTQQLFPPILRLCGLIEGTDAQRLAKCLELESS 1085
>gi|357482859|ref|XP_003611716.1| DNA polymerase [Medicago truncatula]
gi|355513051|gb|AES94674.1| DNA polymerase [Medicago truncatula]
Length = 611
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 222/573 (38%), Positives = 298/573 (52%), Gaps = 84/573 (14%)
Query: 697 IKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAA 756
+KKLV+ RR+ K MK S Q DI Q+ALKLTANSMYGCLGF NSRF+A+PLA
Sbjct: 11 LKKLVKLRREKKTWMKTA--SGLKRQQLDIEQQALKLTANSMYGCLGFSNSRFYAKPLAE 68
Query: 757 LVT-------------------------------------AKGREILLNTKSLVE-NLNY 778
L+T +GREIL +T LV+ NLN
Sbjct: 69 LITLQVRRICWLVSTKPVIIHYHTLSIVSDTFILTYMFDVIQGREILQSTVDLVQNNLNL 128
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
EVIYGDTDS+MI ++D I ++ E NK Y+ LE+D+DG+YK MLLLKKKK
Sbjct: 129 EVIYGDTDSIMIYSGLDDIAKATSISKKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKK-Y 187
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
A + +G E KG+D+VRRDWS LA + G F ++QIL + S +D +++
Sbjct: 188 AAVKVQFKDGTPYEVIERKGLDIVRRDWSLLAKDLGDFCLTQIL-----SGGSCEDVVES 242
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN-SKKLK 957
IH + K++ ++ NG V L ITK LTK PE Y D K PHV VA RL +
Sbjct: 243 IHNSLMKVQEEMRNGQVALEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYTSGCS 302
Query: 958 QGDTISYIIC--EDGTSEAATQ---RAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRLL 1011
GDTI Y+IC + G+S +AT RA + +ELK ID++YYLSQQIHPV++RL
Sbjct: 303 VGDTIPYVICCEQGGSSGSATGIALRARHPDELKQEQGTWLIDIDYYLSQQIHPVISRLC 362
Query: 1012 EPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMN 1071
I+GT R+A+CLGLDTS ++ + E+ ++L G+ EE +Y+ C+ +C
Sbjct: 363 ASIQGTSPERLADCLGLDTSKFQHKSSEASDDPTSSLLFAGDDEE-RYRGCESLVLSC-- 419
Query: 1072 PSCKQVNTV------------EAPTRLST--HGVVFVLDECINPEC--KVPPYTYLPHLI 1115
PSC V E PT T F C P+C +
Sbjct: 420 PSCSSVFDCPPVFKSICMLGNEKPTSSGTDESDYNFWRKLCC-PKCFENGAGRISAAMIA 478
Query: 1116 NKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCPLGL--KTRLCTTCHKY-----KLHRV 1168
N++ + K+++ YY G L C+D C TR L + T C Y L+R
Sbjct: 479 NQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSVSFRLVGDSERGTVCPNYPRCNGHLNRK 538
Query: 1169 YTELQLYQQLSFFHY----ICDITKALTKSDTP 1197
YTE LY+QLS+F + +C I K KS P
Sbjct: 539 YTEADLYKQLSYFCHVFDTVCYIEKMEAKSRIP 571
>gi|452823842|gb|EME30849.1| DNA polymerase alpha subunit A [Galdieria sulphuraria]
Length = 1356
Score = 293 bits (749), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 273/494 (55%), Gaps = 33/494 (6%)
Query: 565 VCGNVLSRTLMGGRSERNEFLLLHAFHE--KSYVLPDKQ-----------YGKNKKEGEE 611
+ G + S L R+ER E LL HAF E +LPDK K E +E
Sbjct: 742 ISGYLWSNCLFFTRAERVEILLAHAFKELFPKAILPDKLDRSKKELLQLVLKSEKAEEQE 801
Query: 612 TGEANKGKGR---KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV 668
T +GR +KA Y GGLVLEPK+G YD I+ +DFNSLYPSIIQEYN+CFTT
Sbjct: 802 TVTEKVVEGRTSKRKAKYEGGLVLEPKRGLYDSLILQLDFNSLYPSIIQEYNLCFTTT-- 859
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
+L DS L E + H G+LP ++KLV+ RR+VK L KQ + Q +I Q
Sbjct: 860 -ILYDSSFQNL-EDVVIHTKKKGVLPLVLEKLVQRRREVKDL-KQKTKDINRQQQLNIEQ 916
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
ALKLTANS+YGCLG +SRF AQ LAALVT GR L T + E +EVIYGDTDS+
Sbjct: 917 AALKLTANSVYGCLGAEHSRFGAQTLAALVTQFGRVTLDKTIKIAERCGFEVIYGDTDSM 976
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
++ V + D+V + G +K E N+ ++ LE+D++ +Y MLLL+KK YAA+ + +
Sbjct: 977 FLNTGVKELDAVLEKGRVLKHEVNRNFRSLEIDVEAIYTRMLLLQKKHYAAMRLVDPVSR 1036
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
E+KGV++VR DW + E V+ +L + + + + + +++++R
Sbjct: 1037 PGETILEVKGVEMVRHDWCPASRELSLQVVELLLSSKFEREECVHKVISCLRFYIEQVR- 1095
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC- 967
G VPL ITK LT+ P +Y++ PHV+VA RL L+ G I Y++C
Sbjct: 1096 ---QGNVPLEKFVITKSLTQKPSDYSNDTNNPHVEVAKRL-ICKGFPLRTGSYIPYVMCK 1151
Query: 968 --EDGTSEAA--TQRAYNIEELKNNS-KLKIDVNYYLSQQIHPVVTRLLEP-IEGTDAVR 1021
E+G + T Y+ EL + KL ID +Y+ Q+ P V RL EP + + +
Sbjct: 1152 RTENGYQRTSDTTPVPYHPSELDEAAVKLSIDTEWYIDTQLLPPVLRLCEPAFDEAEKDQ 1211
Query: 1022 IAECLGLDTSLYRS 1035
+ E G+ T+ +S
Sbjct: 1212 LLEACGISTATRKS 1225
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 27/198 (13%)
Query: 366 ADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSH----------- 414
AD S + EN ++ R F+ D E + +++LFGK E++
Sbjct: 254 ADSSHYVPCYTENDEI-RFFWYDIEEAVSAGGSSLFLFGKALFYESDDKLQQKDGKSRQI 312
Query: 415 -SSCCVIVQNIDRKIYLLPRSEHLKT------KEPVSI--AQVYSEFDQIATQYKILDFK 465
+ C+ + N+DR +Y PR + L+ + V + +QV+ E QI T + F
Sbjct: 313 LKNVCLHLPNLDRVLYFAPRWDTLQQDSIQNENDAVELIRSQVFPEVQQITTPL-VPRFF 371
Query: 466 SRKIEKKYAF-NLPGVPDL-SEYLEVRYSAKCPALPSDLS---GDTFSHVFGTKSSFLEN 520
++ + + + F + P VP + YL+V+Y K +L+ G TF+ +FGT ++ +E
Sbjct: 372 AKPVTRIHPFLDDPRVPKYDAYYLKVKYPFKYAPPSKELAIQGGKTFNRIFGTTTTAIER 431
Query: 521 LLLERKIKGPSWLEFPEA 538
LLL++K+KGP WL A
Sbjct: 432 LLLKKKLKGPGWLRLKNA 449
>gi|167375936|ref|XP_001733786.1| DNA polymerase alpha catalytic subunit [Entamoeba dispar SAW760]
gi|165904960|gb|EDR30082.1| DNA polymerase alpha catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1132
Score = 277 bits (709), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 209/596 (35%), Positives = 310/596 (52%), Gaps = 84/596 (14%)
Query: 554 CNQMEKI----RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKS--YVLPDKQYGKNKK 607
CNQM I +TN+ GN+ S + G R+ER E+LLLH F +++ Y+LPDK++G+
Sbjct: 535 CNQMNAIAMTKELTNLAGNIWSHSFFGKRAERVEYLLLHEFIKQTTLYILPDKKFGE--- 591
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
G + Y+GGLVLEP K FY I+L+DF SLYPSII E+ +CF
Sbjct: 592 ------------GSQHKKYAGGLVLEPVKDFYSDPILLIDFKSLYPSIIMEFGVCFLNSQ 639
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL-MQYDI 726
+ + + +LP IKKLV RRQ+ + M++ ++ Q +
Sbjct: 640 LG----------------GENNKSMLPEIIKKLVMRRRQIVSEMEKLGDKDEIKKAQLNT 683
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
+Q ++K+ NS+YGCLGF SRF+ Q +A +T KGR IL NT V+ ++ +VIYGDTD
Sbjct: 684 QQLSVKVMTNSIYGCLGFKGSRFYCQKIAEWITGKGRTILTNTCEQVQKMDIQVIYGDTD 743
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
SLM+ + GN + ++ NK YK LE++ID +++ +LLL+KK+YAA I
Sbjct: 744 SLMVRPPKISLKDLKNFGNNLCAQINKSYKSLEIEIDAIFEKLLLLRKKRYAATMILDGG 803
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+E+KG+DVVRR+W L+ E G + I IL +D L Q + + K I
Sbjct: 804 KK----KKELKGLDVVRREWCPLSKEIGYYCIDLIL-----SDPGLVKMQQILETYFKNI 854
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
L +G V + L ITK L K P+ Y + + HV AL+ +SK K GD I Y+I
Sbjct: 855 AEKLRSGKVDIHQLVITKGLNKDPQSYPQK--IDHVAAALK----SSKHYKAGDQIKYLI 908
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECL 1026
+ +++++ R+ ++ ++ K + D YYL QI+ V+RL E + ++I E L
Sbjct: 909 EKGDNTKSSSDRSIPLDVVEKLDKFEPDYEYYLDTQIYAPVSRLFEVFPSIN-IKIREWL 967
Query: 1027 GLD--TSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
GL T+LY S+I + +S + LG FE C CK+V T A
Sbjct: 968 GLSPTTTLY-SRIAVTANKS-GSWLG--------------FEIEC--GECKKVFTYRAYQ 1009
Query: 1085 RLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPG 1140
+C PECK YT L++K Q M K + Y + + C D G
Sbjct: 1010 ERDM--------KCRCPECK-KLYTS-TDLVSKGKQYMEKVLDDYLKQKVSCNDCG 1055
Score = 43.9 bits (102), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 19/173 (10%)
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVS 444
FF + G V+L GKV K +N SC ++V+ I R +++ P+ E + + V
Sbjct: 132 FFYIDLVSVTTMKGCVFLIGKV--KGDNGFISCSILVKGIRRVLFVEPKKEFINKPKEV- 188
Query: 445 IAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY----SAKCPALPS 500
+++ YK + + K+ N D E LE + +C
Sbjct: 189 -------IEELKKYYKSTNVVFAEATKEMIINPQDTNDNKELLEKKVIKGIQVECYFDDK 241
Query: 501 DL--SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI---SWC 548
+L +G T+ V+ + E L I GPSW++F + + SWC
Sbjct: 242 ELNDTGKTYEKVYQKTLTCEEVFLSNYSIFGPSWIKFNGLTVVRTSVEQKSWC 294
>gi|407042202|gb|EKE41203.1| DNA polymerase alpha catalytic subunit, putative [Entamoeba nuttalli
P19]
Length = 1132
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 209/599 (34%), Positives = 316/599 (52%), Gaps = 90/599 (15%)
Query: 554 CNQMEKI----RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKS--YVLPDKQYGKNKK 607
CNQM I +TN+ GN+ S + G R+ER E+LLLH F +++ Y+LPDK++G+
Sbjct: 535 CNQMNAIAMTKELTNLAGNIWSHSFFGKRAERVEYLLLHEFIKQTTLYILPDKKFGE--- 591
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
G + Y+GGLVLEP K FY I+L+DF SLYPSII E+ +CF
Sbjct: 592 ------------GSQHKKYAGGLVLEPVKDFYSDPILLIDFKSLYPSIIMEFGVCFLNSQ 639
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL-MQYDI 726
+ + + +LP IKKLV RRQ+ + M++ ++ Q +
Sbjct: 640 L----------------GGENNKSMLPEIIKKLVMRRRQIVSEMERLGDKDEIKKAQLNT 683
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
+Q ++K+ NS+YGCLGF SRF+ Q +A +T KGR IL NT V+ ++ +VIYGDTD
Sbjct: 684 QQLSVKVMTNSIYGCLGFKGSRFYCQKIAEWITGKGRTILTNTCEQVQKMDIQVIYGDTD 743
Query: 787 SLMI---SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
SLM+ ++ND + GN + ++ NK YK LE++ID +++ +LLL+KK+YAA I
Sbjct: 744 SLMVRPPKISMNDLKT---FGNNLCAQINKSYKSLEIEIDAIFEKLLLLRKKRYAATMIL 800
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+E+KG+DVVRR+W L+ E G + I IL +D L Q + +
Sbjct: 801 DGGKK----KKELKGLDVVRREWCPLSKEIGYYCIDLIL-----SDPGLVKMQQTLEIYF 851
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTIS 963
K + L +G V + L ITK L K P+ Y + + HV AL+ +SK K GD +
Sbjct: 852 KNMAEKLRSGKVDIHQLVITKGLNKDPQSYPQK--IDHVAAALK----SSKHYKAGDQVK 905
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIA 1023
Y+I + +++++ R+ ++ ++ K + D YYL QI+ V+RL E + ++I
Sbjct: 906 YLIEKGDNTKSSSDRSIPLDVVEKLEKFEPDYEYYLDTQIYAPVSRLFEVFPSMN-IKIR 964
Query: 1024 ECLGLD--TSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVE 1081
E LGL+ T+LY S+I + +S L +G FE C CK+V T
Sbjct: 965 EWLGLNPTTNLY-SRIVVTTNKSG---LWLG------------FEIEC--SECKKVFTYR 1006
Query: 1082 APTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPG 1140
A +C PECK YT L++K Q M K + +Y + + C D G
Sbjct: 1007 AYQERDM--------KCRCPECK-KLYTS-TDLVSKGKQYMEKILDEYLKQEVSCNDCG 1055
Score = 46.2 bits (108), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVS 444
FF + G V+L GKV K +N SC ++V+ I R +++ P++E + + V
Sbjct: 132 FFYIDLVSVTTMKGCVFLIGKV--KGDNGFISCSILVKGIRRVLFVEPKNEFVNKPKEV- 188
Query: 445 IAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY----SAKCPALPS 500
+++ YK + + K+ N D E LE R +C
Sbjct: 189 -------IEELKRHYKSTNVVFVEATKEMIINPQDTNDNKELLEKRVIKGIQVECYFDDK 241
Query: 501 DL--SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI---SWC 548
+L +G T+ V+ + E L I GPSW++F + + SWC
Sbjct: 242 ELNDTGKTYEKVYQKTLTCEEVFLSNYSIFGPSWIKFNGLTVVRTSVEQKSWC 294
>gi|302803544|ref|XP_002983525.1| hypothetical protein SELMODRAFT_422725 [Selaginella moellendorffii]
gi|300148768|gb|EFJ15426.1| hypothetical protein SELMODRAFT_422725 [Selaginella moellendorffii]
Length = 935
Score = 276 bits (707), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 196/528 (37%), Positives = 267/528 (50%), Gaps = 131/528 (24%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEET-------- 612
++TN+ GN+ S+TL G R++R ++LLLH F+ + Y++PDK G K++ ET
Sbjct: 451 QLTNINGNLWSKTLQGARAQRVQYLLLHEFYGRKYIVPDKVSGSEKEKDNETKRKTAQQD 510
Query: 613 -----GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
A + K +K AY+GGLVLEPKKG Y+ F YPSIIQEYNICFTT
Sbjct: 511 EDFEPDSAVEAKNKKAPAYTGGLVLEPKKGLYNNF---------YPSIIQEYNICFTT-- 559
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL--MQYD 725
V D I++L P G+LP QVK +K+ ++D+L Q D
Sbjct: 560 VERSSDGSISSL----PNADA-PGVLP-----------QVKQWLKK---TTDVLKYQQMD 600
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDT 785
I+Q+ALKLTANSMYGCLGFPNSRF+A+ +A L+T
Sbjct: 601 IQQQALKLTANSMYGCLGFPNSRFYAKFIAELIT-------------------------- 634
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+ NK +K LE+D+DGV+K MLLLKKKKYA + +
Sbjct: 635 -----------------------SQVNKKHKLLEIDLDGVFKRMLLLKKKKYACVKVETS 671
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
++GK+ E KF + D + IH+ ++K
Sbjct: 672 ADGKL--------------------REVNKFF------------FDFQDVVDAIHDKLRK 699
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
++ D+ NG + L ITK L+K PE+Y D K PHVQVALR K GDTI Y+
Sbjct: 700 LQDDMRNGRIDLEKYVITKSLSKLPEDYPDSKNQPHVQVALR-RKQECHKCFPGDTIPYV 758
Query: 966 IC--EDGTSEAATQRAYNIEELK-NNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
IC E T+RA + ++LK IDV+YYLSQQIHP+V+RL IEGTD I
Sbjct: 759 ICCQEGVLGVPLTERARHPDKLKAGGGGWTIDVDYYLSQQIHPIVSRLCTLIEGTDPSHI 818
Query: 1023 AECLGLDTSLYRSQIKESIQQSEENILGVGEA-EEVKYQFCDKFEFTC 1069
A+CLGLD S ++ + E+ ++ +E +Y C E C
Sbjct: 819 ADCLGLDPSKFQQHSVSTTLDKEDALVATSVLDDEDRYNRCKALELLC 866
>gi|67484306|ref|XP_657373.1| DNA polymerase alpha catalytic subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56474627|gb|EAL51989.1| DNA polymerase alpha catalytic subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449706283|gb|EMD46161.1| DNA polymerase alpha catalytic subunit, putative [Entamoeba
histolytica KU27]
Length = 1132
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 209/600 (34%), Positives = 317/600 (52%), Gaps = 92/600 (15%)
Query: 554 CNQMEKI----RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKS--YVLPDKQYGKNKK 607
CNQM I +TN+ GN+ S + G R+ER E+LLLH F +++ Y+LPDK++G+
Sbjct: 535 CNQMNAIAMTKELTNLAGNIWSHSFFGKRAERVEYLLLHEFIKQTTLYILPDKKFGE--- 591
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
G + Y+GGLVLEP K FY I+L+DF SLYPSII E+ +CF
Sbjct: 592 ------------GSQHKKYAGGLVLEPVKDFYSDPILLIDFKSLYPSIIMEFGVCFLNSQ 639
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL-MQYDI 726
+ + + +LP IKKLV RRQ+ + M++ ++ Q +
Sbjct: 640 L----------------GGENNKSMLPEIIKKLVMRRRQIVSEMERLGDKDEIKKAQLNT 683
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
+Q ++K+ NS+YGCLGF SRF+ Q +A +T+KGR IL NT V+ ++ +VIYGDTD
Sbjct: 684 QQLSVKVMTNSIYGCLGFKGSRFYCQKIAEWITSKGRTILTNTCEQVQKMDIQVIYGDTD 743
Query: 787 SLMI---SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
SLM+ ++ND + GN + ++ NK YK LE++ID +++ +LLL+KK+YAA I
Sbjct: 744 SLMVRPPKISMNDLKT---FGNNLCAQINKSYKSLEIEIDAIFEKLLLLRKKRYAATMIL 800
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE-H 902
+E+KG+DVVRR+W L+ E G + I IL + ++Q I E +
Sbjct: 801 DGGKK----KKELKGLDVVRREWCPLSKEIGYYCIDLILSDPGLV------KMQQILEIY 850
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTI 962
K + L +G V + L ITK L K P+ Y + HV AL+ +SK K GD +
Sbjct: 851 FKNMAEKLRSGKVDIHQLVITKGLNKDPQSYPQKT--DHVAAALK----SSKHYKAGDQV 904
Query: 963 SYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
Y+I + +++++ R+ ++ ++ K + D YYL QI+ V+RL E + ++I
Sbjct: 905 KYLIEKGDNTKSSSDRSIPLDVVEKLEKFEPDYEYYLDTQIYAPVSRLFEVFPRMN-IKI 963
Query: 1023 AECLGLD--TSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTV 1080
E LGL+ T+LY S+I + +S L +G FE C CK+V T
Sbjct: 964 REWLGLNPTTNLY-SRIAVTTNKSG---LWLG------------FEIEC--SECKKVFTY 1005
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPG 1140
A +C PECK YT L++K Q M K + +Y + + C D G
Sbjct: 1006 RAYQERDM--------KCRCPECK-KLYTS-TDLVSKGKQYMEKVLDEYLKQEVSCNDCG 1055
Score = 45.1 bits (105), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 385 FFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVS 444
FF + G V+L GKV K +N SC ++V+ I R +++ P++E + + V
Sbjct: 132 FFYIDLVSVTTMKGCVFLIGKV--KGDNGFISCSILVKGIRRVLFVEPKNEFINKPKEV- 188
Query: 445 IAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRY----SAKCPALPS 500
+++ YK + + K+ N D E LE + +C
Sbjct: 189 -------IEELKRHYKSTNVVFVEATKEMIINPQDTNDNKELLEKKVIKGIQVECYFDDK 241
Query: 501 DL--SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRI---SWC 548
+L +G T+ V+ + E L I GPSW++F + + SWC
Sbjct: 242 ELNDTGKTYEKVYQKTLTCEEVFLSNYSIFGPSWIKFNGLTVVRTSVEQKSWC 294
>gi|19173639|ref|NP_597442.1| DNA-DIRECTED DNA POLYMERASE ALPHA [Encephalitozoon cuniculi GB-M1]
Length = 956
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 287/505 (56%), Gaps = 58/505 (11%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
++ V G +L+RTL R+ER E+ LLH + + ++ P R
Sbjct: 357 MSEVSGYILNRTLQNLRAERIEYTLLHELYARGFLFPPTV------------------SR 398
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV--RMLQDSDITTL 679
++ YSGGLVL P+ GFY+ ++L+DFNSLYPSIIQE+N+CF+TI + R + + +
Sbjct: 399 REVKYSGGLVLPPQTGFYEDLVLLLDFNSLYPSIIQEFNVCFSTIGMFDRSISGNMSSEQ 458
Query: 680 CEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
L E ++ G LP ++ V R+ VK L+KQ + DIRQKALKLTANS
Sbjct: 459 LVRLTEDAKNSERGFLPRILEGFVRRRKAVKDLLKQGGTPEE-TKALDIRQKALKLTANS 517
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNV-- 794
+YGCLGF SRF +AA +T+KGR++LL K + E +IYGDTDS+M+ +
Sbjct: 518 IYGCLGFVGSRFCNYTMAAYITSKGRDLLLEAKRIAEGECGVRIIYGDTDSVMVHTGLAG 577
Query: 795 --NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
++Y ++ +++ N YK++E+++D V+K +LL KKK+YA L ++ G++
Sbjct: 578 KKSNYTKALELSRRLQDAINSRYKKIEIEVDKVFKKLLLYKKKRYAGLYMTDDGKGRI-- 635
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQIL----DEQSY------------TDYSLDDRL 896
E KG+D+VR+D+ +++ + + V+ +L D ++Y D S+ R
Sbjct: 636 --EYKGLDLVRKDFCEVSRKICRIVLELLLADCEDPETYRRFYEGEPKMVLNDGSIKIR- 692
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+ +++ ++K+ +DL+ +P I L+KAPE Y ALPHV +ALRL K
Sbjct: 693 EAVYDELRKVSSDLEG--IPAREFVIHNTLSKAPESYDACAALPHVSLALRLKE-RGMKF 749
Query: 957 KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+QGD + Y+I + +A +RAY+ +E ID YY+S QI P + R++ ++G
Sbjct: 750 EQGDVVCYVIGKGDPGQAIHKRAYHPDE-----DFAIDYGYYISSQILPPLLRVVGIVKG 804
Query: 1017 TDAVRIAECLGLDTSLYRSQIKESI 1041
A +I + G++ S+ +S+++++I
Sbjct: 805 FHAGKIGKIFGVE-SVPKSEVQKAI 828
>gi|392512664|emb|CAD26619.2| DNA-DIRECTED DNA POLYMERASE ALPHA [Encephalitozoon cuniculi GB-M1]
Length = 951
Score = 275 bits (704), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 287/505 (56%), Gaps = 58/505 (11%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
++ V G +L+RTL R+ER E+ LLH + + ++ P R
Sbjct: 352 MSEVSGYILNRTLQNLRAERIEYTLLHELYARGFLFPPTV------------------SR 393
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV--RMLQDSDITTL 679
++ YSGGLVL P+ GFY+ ++L+DFNSLYPSIIQE+N+CF+TI + R + + +
Sbjct: 394 REVKYSGGLVLPPQTGFYEDLVLLLDFNSLYPSIIQEFNVCFSTIGMFDRSISGNMSSEQ 453
Query: 680 CEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
L E ++ G LP ++ V R+ VK L+KQ + DIRQKALKLTANS
Sbjct: 454 LVRLTEDAKNSERGFLPRILEGFVRRRKAVKDLLKQGGTPEE-TKALDIRQKALKLTANS 512
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNV-- 794
+YGCLGF SRF +AA +T+KGR++LL K + E +IYGDTDS+M+ +
Sbjct: 513 IYGCLGFVGSRFCNYTMAAYITSKGRDLLLEAKRIAEGECGVRIIYGDTDSVMVHTGLAG 572
Query: 795 --NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
++Y ++ +++ N YK++E+++D V+K +LL KKK+YA L ++ G++
Sbjct: 573 KKSNYTKALELSRRLQDAINSRYKKIEIEVDKVFKKLLLYKKKRYAGLYMTDDGKGRI-- 630
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQIL----DEQSY------------TDYSLDDRL 896
E KG+D+VR+D+ +++ + + V+ +L D ++Y D S+ R
Sbjct: 631 --EYKGLDLVRKDFCEVSRKICRIVLELLLADCEDPETYRRFYEGEPKMVLNDGSIKIR- 687
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+ +++ ++K+ +DL+ +P I L+KAPE Y ALPHV +ALRL K
Sbjct: 688 EAVYDELRKVSSDLEG--IPAREFVIHNTLSKAPESYDACAALPHVSLALRLKE-RGMKF 744
Query: 957 KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+QGD + Y+I + +A +RAY+ +E ID YY+S QI P + R++ ++G
Sbjct: 745 EQGDVVCYVIGKGDPGQAIHKRAYHPDE-----DFAIDYGYYISSQILPPLLRVVGIVKG 799
Query: 1017 TDAVRIAECLGLDTSLYRSQIKESI 1041
A +I + G++ S+ +S+++++I
Sbjct: 800 FHAGKIGKIFGVE-SVPKSEVQKAI 823
>gi|449329080|gb|AGE95354.1| DNA-directed DNA polymerase alpha [Encephalitozoon cuniculi]
Length = 956
Score = 275 bits (702), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 287/505 (56%), Gaps = 58/505 (11%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
++ V G +L+RTL R+ER E+ LLH + + ++ P R
Sbjct: 357 MSEVSGYILNRTLQNLRAERIEYTLLHELYARGFLFPPTV------------------SR 398
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV--RMLQDSDITTL 679
++ YSGGLVL P+ GFY+ ++L+DFNSLYPSIIQE+N+CF+TI + R + + +
Sbjct: 399 REVKYSGGLVLPPQTGFYEDLVLLLDFNSLYPSIIQEFNVCFSTIGMFDRSISGNMSSEQ 458
Query: 680 CEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
L E ++ G LP ++ V R+ VK L+KQ + DIRQKALKLTANS
Sbjct: 459 LVRLTEDAKNSERGFLPRILEGFVRRRKAVKDLLKQGRTPEE-TKALDIRQKALKLTANS 517
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNV-- 794
+YGCLGF SRF +AA +T+KGR++LL K + E +IYGDTDS+M+ +
Sbjct: 518 IYGCLGFVGSRFCNYTMAAYITSKGRDLLLEAKRIAEGECGVRIIYGDTDSVMVHTGLAG 577
Query: 795 --NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
++Y ++ +++ N YK++E+++D V+K +LL KKK+YA L ++ G++
Sbjct: 578 KKSNYTKALELSRRLQDAINSRYKKIEIEVDKVFKKLLLYKKKRYAGLYMTDDGKGRI-- 635
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQIL----DEQSY------------TDYSLDDRL 896
E KG+D+VR+D+ +++ + + V+ +L D ++Y D S+ R
Sbjct: 636 --EYKGLDLVRKDFCEVSRKICRIVLELLLADCEDPETYRRFYEGEPKMVLNDGSIKIR- 692
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+ +++ ++K+ +DL+ +P I L+KAPE Y ALPHV +ALRL K
Sbjct: 693 EAVYDELRKVSSDLEG--IPAREFVIHNTLSKAPESYDACAALPHVSLALRLKE-RGMKF 749
Query: 957 KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+QGD + Y+I + +A +RAY+ +E ID YY+S QI P + R++ ++G
Sbjct: 750 EQGDVVCYVIGKGDPGQAIHKRAYHPDE-----DFAIDYGYYISSQILPPLLRVVGIVKG 804
Query: 1017 TDAVRIAECLGLDTSLYRSQIKESI 1041
A +I + G++ S+ +S+++++I
Sbjct: 805 FHAGKIGKIFGVE-SVPKSEVQKAI 828
>gi|300121996|emb|CBK22570.2| unnamed protein product [Blastocystis hominis]
Length = 780
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 189/498 (37%), Positives = 282/498 (56%), Gaps = 51/498 (10%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
+I+ + G R L RSER E+ LLH F +K+++ PDKQ K K++
Sbjct: 203 QISCISGLPWGRCLRSNRSERVEYYLLHGFRQKNFITPDKQ-RKVKQQ------------ 249
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
++K+ Y GGLVLEPK Y+ F++++DFNSLYPSIIQEYN+C+TT+ ++ +
Sbjct: 250 KRKSKYEGGLVLEPKADLYEDFVLVLDFNSLYPSIIQEYNLCYTTVKREKKEEENENEKE 309
Query: 681 EYLPEHQVDTGILPSE----------IKKLVESRRQVKALMKQPNLSSDLLM--QYDIRQ 728
+ + + + E I+ LV RR+VK LMK+ S+ L Q DIRQ
Sbjct: 310 NEKEKEKEERKEVEKEEGEDEDGDLLIRYLVTKRREVKGLMKK---ESNPLKRKQLDIRQ 366
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
ALK+ ANSMYGCLGF NSRF A +A+ VT GR IL NT+ L E Y VIYGDTDS+
Sbjct: 367 LALKILANSMYGCLGFTNSRFCATAIASTVTRVGRYILQNTRLLAEKEGYSVIYGDTDSI 426
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
MI+ DY +IG ++K++ NK YK L++DID V++ MLLLKKKKYAA+ + +
Sbjct: 427 MINTATRDYQQTMEIGRELKNKINKKYKYLQIDIDYVFQKMLLLKKKKYAAVKVISVEGT 486
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
++ +E +G+D+VRRDWS L +AG ++ + E+S +++ ++ +
Sbjct: 487 RLTTQRETRGIDLVRRDWSILTKDAGSKLLDILFSEESRDEFA-----DQFGRYLTDLAA 541
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDR--KALPHVQVAL------------RLNNTNSK 954
+ N VP EIT LT++ +Y +R +LPHV VA L ++
Sbjct: 542 SMRNNLVPYEKYEITMSLTRSLADYRERDISSLPHVVVAQFIEIHSFIHSIDSLIHSFVS 601
Query: 955 KLKQGDTISYIIC---EDGTSEAATQRAYNIEELKN-NSKLKIDVNYYLSQQIHPVVTRL 1010
GD I Y+IC +S + +A+ + E++N N LK DV++YL Q+ P ++RL
Sbjct: 602 FTHAGDFIRYVICYPPNASSSPSLGSQAFTVAEIRNSNGALKPDVDWYLRNQLLPTLSRL 661
Query: 1011 LEPIEGTDAVRIAECLGL 1028
+ P++ ++ CLGL
Sbjct: 662 IAPLKDIPPSFLSHCLGL 679
>gi|440293483|gb|ELP86600.1| DNA polymerase, putative [Entamoeba invadens IP1]
Length = 1126
Score = 271 bits (692), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 265/472 (56%), Gaps = 51/472 (10%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEK--SYVLPDKQYGKNKKEGEETGEANKGK 619
+TN+ GN+ S TL G R+ER E+LLLH F ++ +V+PDK+Y +
Sbjct: 546 LTNLAGNIWSHTLNGQRAERVEYLLLHEFMKRRSEFVIPDKRYLE--------------- 590
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
G++ Y+GGLVLEP K FY+ ++L+DF SLYPSII E+ +CFT + D +
Sbjct: 591 GQQHKKYAGGLVLEPVKQFYNDPVLLIDFKSLYPSIIMEFAVCFTNNTI-----GDKSGK 645
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALM-KQPNLSSDLLMQYDIRQKALKLTANSM 738
C +LP I KLV+ RR + A M K + + Q + Q ++K+ NS+
Sbjct: 646 C-----------VLPEIISKLVKKRRALVAEMEKLGSNEENKKAQMNTEQLSVKVMTNSI 694
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YGCLGF RF+ Q +A +T KGR+IL T V+ Y V+YGDTDSLM+
Sbjct: 695 YGCLGFKGGRFYCQKIAEWITKKGRQILTATYEQVQESGYSVVYGDTDSLMVKPETRSLK 754
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
+K+G ++ N Y LE++ID V+ +LLLKKK+YAA+ +++ NG+ +E+KG
Sbjct: 755 ETYKVGEELCKLINNKYTSLEIEIDAVFSKLLLLKKKRYAAIMVNE--NGE--TKRELKG 810
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+DVVRR+W + E G + I+ IL D + L ++ + KKI +DL G V +
Sbjct: 811 LDVVRREWCLFSKEIGNYCINLIL-----KDEGKEKTLHDLENYFKKIASDLRGGKVDIA 865
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE--AAT 976
L I K L+K P+EY +K + HV AL+ ++K+ K GD + ++I ++ +E
Sbjct: 866 KLVIVKGLSKDPKEYA-QKTIEHVSAALK----STKEYKAGDQVKFVIRQNLENENVGVV 920
Query: 977 QRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
+RA +++++ +ID YYL QI V+R+ E G + +I E +GL
Sbjct: 921 ERALPLDQIEKFEHFQIDYEYYLENQIFAPVSRIFEVFSGMNN-KIREWIGL 971
>gi|396081416|gb|AFN83033.1| DNA-directed DNA polymerase alpha [Encephalitozoon romaleae SJ-2008]
Length = 947
Score = 269 bits (687), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 287/506 (56%), Gaps = 58/506 (11%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
++ + G +L+R L R+ER E+ LLH +E+ Y+ P R
Sbjct: 348 MSEISGYILNRALQNLRAERIEYTLLHELYERGYLFPCVA------------------SR 389
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV---RMLQDSDITT 678
++ Y+GGLVL P+ GFY+ ++L+DFNSLYPSIIQE+N+CF+TI + R+ D D
Sbjct: 390 REVKYTGGLVLSPQVGFYEDLVLLLDFNSLYPSIIQEFNVCFSTIGMFNGRISGDMDGEK 449
Query: 679 LCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
L E L E + G LP ++ V R+ VK LMK+ ++ + +IRQ+ALKLTAN
Sbjct: 450 L-EMLTEKSRSSGRGFLPKILEGFVGRRKAVKDLMKRCKGKEEIKV-LEIRQRALKLTAN 507
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV-ENLNYEVIYGDTDSLMISCNV- 794
S+YGCLGF SRF +AA +T KGR++LL K + E ++IYGDTDS+M+ +
Sbjct: 508 SIYGCLGFAGSRFCNYTMAAYITNKGRDLLLEAKRIAEEGCGMKIIYGDTDSVMVHTGLG 567
Query: 795 ---NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
++Y ++ ++K N YK++E+++D V+K +LL KKKKYA L I++ GK
Sbjct: 568 GEMSNYKKALEMSVRLKDAINSRYKKIEIEVDKVFKKLLLYKKKKYAGLYITE--EGK-- 623
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQIL----DEQSYTDYSLDD--RLQN------- 898
S E KG+D+VR+D+ + + + V+ +L D ++Y + D+ R+ N
Sbjct: 624 SSIEYKGLDLVRKDFCEASRRVCRSVLELLLTDFEDPRTYARFYEDEPKRVLNDGNSKIR 683
Query: 899 --IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+++ +KK+ ++L+ +P I L+KAPE Y ALPHV +ALRL K
Sbjct: 684 RAVYDELKKLSSNLEG--LPTKDFVIYNTLSKAPENYDPSVALPHVSLALRLKEAG-MKF 740
Query: 957 KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
QGD Y+I + G +EA +RAY++ N ID YY+S QI P + R++ ++G
Sbjct: 741 DQGDVACYVIGKGGPNEAPHKRAYHL-----NEDFAIDYEYYISNQILPPLLRIVGIVKG 795
Query: 1017 TDAVRIAECLGLDTSLYRSQIKESIQ 1042
+I G++ + ++++++SI
Sbjct: 796 FHGEKIGRIFGVE-KVVKTEVQKSIS 820
>gi|401826411|ref|XP_003887299.1| DNA polymerase type-B alpha subfamily catalytic domain-containing
protein [Encephalitozoon hellem ATCC 50504]
gi|392998458|gb|AFM98318.1| DNA polymerase type-B alpha subfamily catalytic domain-containing
protein [Encephalitozoon hellem ATCC 50504]
Length = 938
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 308/614 (50%), Gaps = 104/614 (16%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
++ V G +L+R L R+ER E+ LLH + + Y+ P GR
Sbjct: 339 MSEVSGYILNRALQNLRAERIEYTLLHELYARGYLFPCIT------------------GR 380
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV---RMLQDSDITT 678
K+ Y+GGLVL P+ GFY+ ++L+DFNSLYPSIIQE+N+CF+T+ + R+ D
Sbjct: 381 KEVKYTGGLVLSPQAGFYEDLVLLLDFNSLYPSIIQEFNVCFSTVGMFNGRISGDMSAEQ 440
Query: 679 LCEYLPEHQ--VDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
L E L E + G LP ++ V R+ VK LMKQ + + +IRQ+ALKLTAN
Sbjct: 441 L-EMLTEKSRIAERGFLPKVLEGFVGRRKAVKDLMKQSKGKEETRV-LEIRQRALKLTAN 498
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNV- 794
S+YGCLGF SRF +AA +T KGR++LL K + E +IYGDTDS+M+ +
Sbjct: 499 SIYGCLGFAGSRFCNYTMAAYITNKGRDLLLEAKRIAEGECGMRIIYGDTDSVMVHTGLR 558
Query: 795 ---NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
++Y ++ +++ N Y ++E+++D V+K +LL KKKKYA L + + +G+
Sbjct: 559 GEMSNYKKALEMSRKLREAINSRYVKIEIEVDKVFKKLLLYKKKKYAGLYVGE--DGR-- 614
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQIL----DEQSYTDYSLDDRLQN--------- 898
E KG+D+VR+D+ + + + V+ +L D ++Y + D+ ++
Sbjct: 615 SGIEYKGLDLVRKDFCEASRRICRVVLELLLTDPEDPEAYEVFYKDEPKKDLNDGNSKIR 674
Query: 899 --IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+H+ ++K+R+DL+ +P I L+KAPE Y LPHV +ALRL K
Sbjct: 675 EAVHDELRKLRSDLEG--LPAKDFVIHNTLSKAPENYGPSATLPHVSLALRLKEAG-MKF 731
Query: 957 KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
QGD + Y+I EA +RAY++ N ID YY+S QI P + R++ ++G
Sbjct: 732 DQGDVVCYVIGRGSPGEAIHKRAYHL-----NEDFVIDYEYYISNQILPPLLRIVGIVKG 786
Query: 1017 TDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ 1076
A +I G++ +K +Q++ + ++P C
Sbjct: 787 FHAEKIGRIFGVERV-----VKAEVQKN----------------------ISFLSPCCG- 818
Query: 1077 VNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC 1136
S G V EC + P + H +NK+ + + I Y +C
Sbjct: 819 ----------SVQGAVLKCKEC----SRSIPRGFYTHEVNKM---IRREIECLYSADSRC 861
Query: 1137 EDPGCSDLT--RRC 1148
+ G S T +RC
Sbjct: 862 HECGISSYTHMKRC 875
>gi|223460655|gb|AAI38048.1| Pola1 protein [Mus musculus]
Length = 757
Score = 266 bits (679), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 205/589 (34%), Positives = 309/589 (52%), Gaps = 73/589 (12%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 24 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSVYEEVDEEQYSKLVQARQDD 82
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNA--KGDIQK 156
DWI DD G GYVEDGREIFDDD+ED + + RK K+++ P+ +I+
Sbjct: 83 DWIVDDDGIGYVEDGREIFDDDLEDDALDTCGKGSDGKAHRKDRKDVKKPSVTKPNNIKA 142
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK 216
+ KK + V L+ DD+L D+L ++NT A ++IPK+ K
Sbjct: 143 MFIASAGKKTTDKAVDLSKDDLLGDILQDLNTETA-----QITPPPVLIPKK-------K 190
Query: 217 EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEE-----PVDD 271
P V P K SP+ +++ + + + AE + E P D+
Sbjct: 191 RSTGALLNPFSVHTPKAIPSGKPASPV---LRNEPLLTPIPLKRAELAGELAQPECPEDE 247
Query: 272 GLWEQMQIDD--WDNSQQTQDV--LPEQAKVELQ----IEAIESQSIEEKVDVTNVESVS 323
M+ +D +D S T+ V P AK Q +E +E ++ E+ + +E+
Sbjct: 248 QELGVMEFEDGDFDESMDTEKVDEKPVTAKTWDQETEPVERVEHEADPERGTTSYLENFL 307
Query: 324 SAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTS-EPQVHSRTADDSLPLATDHENKKVF 382
V W+ Q + S E QV S +LPL ++++VF
Sbjct: 308 PDVSC------------------WDIDQDDESIPQEVQVDS----SNLPLVKGADDEQVF 345
Query: 383 RMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL----- 437
+ ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR
Sbjct: 346 QFYWLDAYEDPYNQPGVVFLFGKVWIESVKTHVSCCVMVKNIERTLYFLPREMKFDLNTG 405
Query: 438 -KTKEPVSIAQVYSEFD-QIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKC 495
+T PV++ VY EFD +I+ +YKI+ FKS+ +EK YAF +P VP+ SEYLEVRYSA+
Sbjct: 406 KETAIPVTMKDVYEEFDSKISAKYKIMKFKSKIVEKNYAFEIPDVPEKSEYLEVRYSAEV 465
Query: 496 PALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCN 555
P LP +L G+TFSHVFGT +S LE L+ RKIKGP WLE + ISWCK+EV
Sbjct: 466 PQLPQNLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKFEVMAL 525
Query: 556 QMEKIRITN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
+ + + + V + +T+ ++ ++E + + A S+ L
Sbjct: 526 KPDLVNVIKDVSPPPLVVMSFSMKTMQNVQNHQHEIIAMAALVHHSFAL 574
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 1132 GWLKCEDPGCSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITK 1189
GWL CE+P C RR PL LC C K L Y++ LY QL F+ YI D
Sbjct: 640 GWLICEEPTCCSRLRRLPLHFSRNGPLCPVCMKAVLRPEYSDKSLYTQLCFYRYIFDADC 699
Query: 1190 A---LTKSDTPSIK---FDSETYMGYCKMKQHVERFLESSAYNIVDLKKLFS 1235
A LT+ + +K F Y K+K E+FL S Y+ V+L KLF+
Sbjct: 700 ALEKLTEHEKDKLKKQFFPLRVLQDYRKVKNIAEQFLSWSGYSEVNLSKLFA 751
>gi|229442475|gb|AAI72871.1| DNA polymerase alpha [synthetic construct]
Length = 581
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 207/582 (35%), Positives = 300/582 (51%), Gaps = 61/582 (10%)
Query: 46 RAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQEDDW 105
RA+R+K K + A ++LK K G K+KYE VYEEV E++Y++ V RQ+DDW
Sbjct: 20 RARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDW 78
Query: 106 IDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKNKNIQNPNAK-------GDIQKLL 158
I DD G GYVEDGREIFDDD+ED ++ K K +N N K +I+ +
Sbjct: 79 IVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMF 138
Query: 159 ANMPVKKKKKEEVQLNNDDVLADLLSEVNT-----TIAPTLKLNTKTNEIVIPKEEPPAP 213
KK + V L+ D +L D+L ++NT T P + L K + P
Sbjct: 139 IACAGKKTADKAVDLSKDGLLGDILQDLNTETPQITPPPVMILKKKRSIGASPNPFSVHT 198
Query: 214 TAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEEPVDDGL 273
+ P+ + E P+ P PLK + D +V +S EE + G
Sbjct: 199 ATAVPSGKIASPVS---RKEPPLT--PVPLKRAEFAGD-------DVQVESTEEEQESGA 246
Query: 274 WEQMQIDDWDNSQQTQDV-LPEQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSP 332
E + D+D + ++V L A E+ ++ ++++ D S V S
Sbjct: 247 ME-FEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEAD-----SGKGTVSYLGSF 300
Query: 333 PPQVVEKKEHKCAEWEAIQ---TEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDA 389
P V C W+ Q + S E QV S LPL + ++VF ++LDA
Sbjct: 301 LPDV------SC--WDIDQEGDSSFSVQEVQVDSS----HLPLVKGADEEQVFHFYWLDA 348
Query: 390 FEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL------KTKEPV 443
+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR + +T P+
Sbjct: 349 YEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPI 408
Query: 444 SIAQVYSEFDQ-IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDL 502
S+ VY EFD+ IAT+YKI+ FKS+ +EK YAF +P VP+ SEYLEV+YSA+ P LP DL
Sbjct: 409 SMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQDL 468
Query: 503 SGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRI 562
G+TFSHVFGT +S LE L+ RKIKGP WLE + +SWCK E + + + +
Sbjct: 469 KGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVNV 528
Query: 563 TN-------VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL 597
V +T+ ++ +NE + + A S+ L
Sbjct: 529 IKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFAL 570
>gi|47191078|emb|CAF94751.1| unnamed protein product [Tetraodon nigroviridis]
Length = 205
Score = 263 bits (671), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 160/205 (78%), Gaps = 11/205 (5%)
Query: 571 SRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGK----NKKEGEETGEANKGKGRKKAAY 626
SRTLMGGRSERNEFLLLHAFHEK+Y++PDK K ++ EG+E E KGK RKKAAY
Sbjct: 1 SRTLMGGRSERNEFLLLHAFHEKNYIVPDKPSFKKAQLDQAEGDEEVEVAKGKRRKKAAY 60
Query: 627 SGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS------DITTLC 680
+GGLVL+PK GFYDKF++L+DFNSLYPSIIQE+NICFTT+ R Q S D
Sbjct: 61 AGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQ-REAQHSQKKNEDDEQEEI 119
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
+P+ ++ GILP EI+KLVE R+QVK LMKQ +++ D+ +QYDIRQKALKLTANSMYG
Sbjct: 120 PEIPDSNLEPGILPKEIRKLVERRKQVKGLMKQQDINPDVYLQYDIRQKALKLTANSMYG 179
Query: 741 CLGFPNSRFFAQPLAALVTAKGREI 765
CLGF SR +A+PLAALVT KGRE+
Sbjct: 180 CLGFSYSRLYAKPLAALVTHKGREV 204
>gi|303389355|ref|XP_003072910.1| DNA-directed DNA polymerase alpha [Encephalitozoon intestinalis ATCC
50506]
gi|303302053|gb|ADM11550.1| DNA-directed DNA polymerase alpha [Encephalitozoon intestinalis ATCC
50506]
Length = 953
Score = 256 bits (655), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 188/618 (30%), Positives = 311/618 (50%), Gaps = 85/618 (13%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+ + G +L+RTL R+ER E+ LLH + + Y+ P R
Sbjct: 352 MCEISGYILNRTLQNLRAERIEYTLLHELYNRGYLFPSSV------------------SR 393
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV------RMLQDSD 675
++ Y+GGLVL P+ GFY+ ++L+DFNSLYPSIIQE+N+CF+TI + +
Sbjct: 394 REVKYTGGLVLSPQAGFYEDLVLLLDFNSLYPSIIQEFNVCFSTIGMFDKSVSGDMSPEK 453
Query: 676 ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+ L E + G LP ++ V R+ +K LMKQ + DIRQKALKLTA
Sbjct: 454 LAVLTE--KSRMSERGFLPKILEGFVGRRKAIKDLMKQSRTPEE-AKALDIRQKALKLTA 510
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV-ENLNYEVIYGDTDSLMISCNV 794
NS+YGCLGF SRF +AA +T KGR++LL K + E +IYGDTDS+M+ +
Sbjct: 511 NSIYGCLGFTGSRFCNYTMAAYITNKGRDLLLEAKRIAEEECGMRIIYGDTDSVMVYTGL 570
Query: 795 ----NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
++Y ++ +++ N ++++E+++D V+K +LL KKKKY L + + +GK
Sbjct: 571 CGEKSNYKRALEMSRKLRDTINSKHQKIEIEVDKVFKKLLLYKKKKYGGLYMDE--DGKT 628
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQIL----DEQSYTDYSLDDR----------- 895
E KG+D+VR+D+ +++ + K V+ +L D Y + D
Sbjct: 629 YV--EYKGLDLVRKDFCEVSRKICKIVLELLLADSEDPMVYERFYKDKGEAKTILNNGNT 686
Query: 896 --LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
++ +++ +K + ++L++ +P I L+KAPE Y LPHV +ALRL +
Sbjct: 687 KIIEAVYDELKNLSSNLES--IPSKEFVIHNTLSKAPESYDPSVGLPHVSLALRLKESG- 743
Query: 954 KKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K QGD + Y+I + EA +RAY++ E ID YY+S QI P + R++
Sbjct: 744 MKFDQGDVVCYVIGKGDLREAVHKRAYHLSE-----SFTIDYGYYVSNQILPPLLRIVGV 798
Query: 1014 IEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPS 1073
++G +I + G++ + +K+ +++S + E + C + C P
Sbjct: 799 VKGFHPEKIGKIFGVEKA-----VKQGVEKSISFLTPCCEIAQGASSKCRE----CGKPV 849
Query: 1074 CKQ--VNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLIN--------KLSQDMN 1123
++ V V R + C+ EC + YT++ N L+ D +
Sbjct: 850 SREFYVWKVMEMVRKEVECLYSAESRCL--ECGISSYTHMKRCFNCNSELSFEPLNYDFD 907
Query: 1124 KYIVK---YYEGWLKCED 1138
+ + K + GW++ ED
Sbjct: 908 RLLSKVQSMFTGWVEIED 925
>gi|297790079|ref|XP_002862950.1| hypothetical protein ARALYDRAFT_359258 [Arabidopsis lyrata subsp.
lyrata]
gi|297308733|gb|EFH39209.1| hypothetical protein ARALYDRAFT_359258 [Arabidopsis lyrata subsp.
lyrata]
Length = 1018
Score = 255 bits (652), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 206/327 (62%), Gaps = 16/327 (4%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK-KEGEETGEANKG 618
+++TN+ GN+ +TL GG ++RNE +L H +H K ++LPDK K + + +KG
Sbjct: 390 LQLTNISGNLWGKTLQGGSAQRNELVLRHTYHWKKFILPDKISPHMKERTSHNVDDPSKG 449
Query: 619 -KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT 677
K +K AY+GGLV +K + SIIQEYNICFTTIP + D
Sbjct: 450 NKTKKGPAYAGGLVWSQRKAYMTNMCCFSISVVFTLSIIQEYNICFTTIP----RSEDGV 505
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL-LMQYDIRQKALKLTAN 736
LP Q GILP ++ LV R+ VK MK+ +DL + DIRQKALKLTAN
Sbjct: 506 P---RLPSSQT-PGILPKLMEHLVSIRKCVKLKMKK---ETDLKCRELDIRQKALKLTAN 558
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNVN 795
S+YG LGF NSRF+A+PLA L+T +GREIL T LV+N LN EVIYGDTDS+MI ++
Sbjct: 559 SLYGYLGFSNSRFYAKPLAELITLQGREILQRTVDLVQNHLNLEVIYGDTDSIMIHSGLD 618
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQE 855
+ V IG ++ E NK Y+ L++++D +YK MLLL+KKKYAA+ + + +GK+ E
Sbjct: 619 NIKEVKAIGAKVIQEVNKKYRCLKIELDCIYKRMLLLRKKKYAAIKL-QFKDGKICEDIE 677
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQIL 882
KGVD+VRRDWS L+ E G +++IL
Sbjct: 678 RKGVDMVRRDWSLLSKEIGDLCLAKIL 704
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 122/277 (44%), Gaps = 61/277 (22%)
Query: 954 KKLKQGDTISYIIC-EDGTSEAAT-----QRAYNIEELK-NNSKLKIDVNYYLSQQIHPV 1006
K DT+ YIIC E G++ A+ +RA + +E+K ++++ +D++YYLSQQIHPV
Sbjct: 715 KGFSAKDTVPYIICYEQGSTSLASSAGIAERARHPDEVKSDDNRWLVDIDYYLSQQIHPV 774
Query: 1007 VTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFE 1066
V+RL I+GT R+AECLGLD S YRS+ + L + E +Y+ C+
Sbjct: 775 VSRLCAEIQGTSPERLAECLGLDPSKYRSRSNVTTCSDPSTSLLCATSYEERYKSCEPLA 834
Query: 1067 FTCMNPSCKQVNTVEAPTRLSTHGV-----------VFVLD-ECINPECKVPPYT--YLP 1112
C PSC + T + +F L C P+C+ T P
Sbjct: 835 LAC--PSCSAAFNCPSITTSVCASISNKSETEESDSIFWLKLRC--PKCEAEGSTRRISP 890
Query: 1113 HLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRR--------CPLGLKTRLCTTCHKY- 1163
+I +C+D C TR C G T C Y
Sbjct: 891 AMIAN-----------------QCDDESCKYTTRSPNFRLLGDCERG------TVCPNYP 927
Query: 1164 ----KLHRVYTELQLYQQLSFFHYICDITKALTKSDT 1196
L R YTE LY+QLS+F +I D +L K T
Sbjct: 928 NCRGTLLRKYTEADLYRQLSYFCHILDTQCSLEKVST 964
>gi|221052706|ref|XP_002261076.1| DNA polymerase alpha [Plasmodium knowlesi strain H]
gi|194247080|emb|CAQ38264.1| DNA polymerase alpha, putative [Plasmodium knowlesi strain H]
Length = 1880
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 307/596 (51%), Gaps = 117/596 (19%)
Query: 557 MEKIR-ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEA 615
+EK R +T + G + SR+L+ SER E+ LLH ++ K ++ P K+ +T E
Sbjct: 1022 IEKTRDLTKLSGYLWSRSLLCYTSERIEYFLLHEYNRKKFITPVI------KKRVKTIEN 1075
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ--- 672
++GK + A YSGGLVL+P G+YD F++ +DFNSLYPSII EYN+CF+T+ + Q
Sbjct: 1076 DQGKSKNAAKYSGGLVLDPLCGYYDTFVLYLDFNSLYPSIIIEYNVCFSTLKGKGAQTEV 1135
Query: 673 -----------------------DSDITTLCEYLPEHQVDT------------------- 690
D I L + P +D
Sbjct: 1136 EATKQGEISNGVESPNRASATKGDDSIKELSD--PADSIDVMDAEPGEAVAPNESMEIDD 1193
Query: 691 ------GILPSEIKKLVESRRQVKALM--KQPNLSSDLLMQYDIRQKALKLTANSMYGCL 742
GILPS +K LVE R +K L+ ++ +LL+ I+ ++KL +NS+YGCL
Sbjct: 1194 FDKSKPGILPSILKNLVEKRAFIKKLIANEKNKEKKELLL---IQSLSIKLISNSIYGCL 1250
Query: 743 GFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISC-----NVND 796
G N+RF+A+ +AA +T KGR +L +TKS VE N +VIYGDTDS+MI VN+
Sbjct: 1251 GNTNNRFYAKHMAAFITLKGRNLLQHTKSRVEREFNLKVIYGDTDSIMIDTGIKAQGVNN 1310
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
Y F++ + IK+ NK YK+LELD++ ++ +LLLKKKKYA + + K C E+
Sbjct: 1311 YKEAFRLAHVIKNTINKSYKKLELDLECIFSKLLLLKKKKYACAKVMDANMEK--CEYEM 1368
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQS------YTDYSLDDRLQN-----IHEHMKK 905
KG++ ++RD+S+++ G V+ I + TD +D ++N IHE+++
Sbjct: 1369 KGINFIKRDFSKISKLIGNEVLKIIFSNKDGQGSGKVTD-GMDVPVENDLSEQIHEYLRG 1427
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTIS-- 963
+ + L ITK+LTK EY ++ +L HV VA R+ +K G IS
Sbjct: 1428 VHQRIQADEFDLDFFVITKKLTKNVSEYQEKNSLGHVLVAERM-------MKDGYNISVN 1480
Query: 964 ----YIICEDGTSEAATQR--------------AYNIEELKNNSKLKIDVNYYLSQQIHP 1005
Y +C TSE A++ +++ E+K +K+D +YY+ QI
Sbjct: 1481 KEIQYCVC---TSEDASKFFNKSGNEKLSNSLCCFSVSEIK-KYNMKVDKDYYIRNQILS 1536
Query: 1006 VVTRLLEPIEGTDAVRIAECLGL-DTSLYRSQIKESIQQSEENILGVGEAEEVKYQ 1060
+ RL + IEGT+A ++A C + D ++ + E N+L + E +++
Sbjct: 1537 PIGRLCQYIEGTNAEKLASCFNIFDVREIKTDFQTEENYHESNVLSLLNQSEERFK 1592
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 17/174 (9%)
Query: 392 DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSI------ 445
DI K ++ LFGK K + + S + ++++ R + L + ++ V I
Sbjct: 410 DICKHRNSIILFGKTITK-SKLYRSVSIYIEDMYRCYFFLLSKNMIYKRDGVEIRFGDKS 468
Query: 446 ------AQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKC-PAL 498
+ EF + + I K KI K+ N+ D Y +V YS C P
Sbjct: 469 YNTCIMSDFLEEFQTVRKYHHIESIKC-KIVKRRNLNISS-NDEDMYAKVFYSYNCDPIS 526
Query: 499 PSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWCKYE 551
++G T+S + +EN ++++ +K P W++ E + P+ +++C ++
Sbjct: 527 EKFMNGRTYSSFYCCNEDIIENFIIKKNMKLPCWVKVKELKLNPTNNLTYCYFD 580
>gi|156094533|ref|XP_001613303.1| DNA polymerase alpha [Plasmodium vivax Sal-1]
gi|148802177|gb|EDL43576.1| DNA polymerase alpha, putative [Plasmodium vivax]
Length = 1707
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 198/596 (33%), Positives = 310/596 (52%), Gaps = 121/596 (20%)
Query: 557 MEKIR-ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEA 615
+EK R +T + G + +R+L+ SER E+ LLH ++ K ++ P + K + E+
Sbjct: 874 IEKTRDLTKLSGYLWARSLLCYTSERIEYFLLHEYNRKKFITPVVKKRVKKIDSEQV--- 930
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR------ 669
K + A YSGGLVLEP G+YD F++ +DFNSLYPSII EYN+CF+T+ R
Sbjct: 931 ---KNKAAAKYSGGLVLEPLCGYYDTFVLYLDFNSLYPSIIIEYNVCFSTLKGRGEAANL 987
Query: 670 -----------------------MLQDSDITTLCEYLPEHQVDT---------------- 690
+ + +++ + L + + D
Sbjct: 988 GEAANLGEAANRGEAANLGEAANLGEAANLGAISTELGDAEADAAVALSEAVEVDDFDRT 1047
Query: 691 --GILPSEIKKLVESRRQVKALM--KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPN 746
GILPS +K LVE R +K L+ ++ +LL+ I+ ++KL +NS+YGCLG N
Sbjct: 1048 KPGILPSILKNLVEKRAFIKKLIANEKNKEKKELLL---IQSLSIKLISNSIYGCLGNSN 1104
Query: 747 SRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCNV-----NDYDSV 800
+RF+A+ +AA +T KGR +L +TKS VE N +VIYGDTDS+MI + ++Y
Sbjct: 1105 NRFYAKHMAAFITLKGRNLLQHTKSRVEREFNLKVIYGDTDSIMIDTGIKAQGGSNYKEA 1164
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM-ICSQEIKGV 859
F++ + IK+ NK YK+LELD++ ++ +LLLKKKKYA +K+ + M C E+KG+
Sbjct: 1165 FRLAHVIKNTINKSYKRLELDLECIFSKLLLLKKKKYAC---AKVVDANMERCEYEMKGI 1221
Query: 860 DVVRRDWSQLASEAGKFVISQIL---DEQSYTDYSL------------DDRLQNIHEHMK 904
+ ++RD+S+++ G V+ I D Q+ +D + IHE+++
Sbjct: 1222 NFIKRDFSRISKLIGNEVLKIIFSSKDGQAVGGGGGAGSAGSADPPVENDLSEQIHEYLR 1281
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTIS- 963
+ + L ITK+LTK EY ++ +L HV VA R+ +K G IS
Sbjct: 1282 GVHQRILADEFDLDFFTITKKLTKNVSEYQEKNSLGHVLVAERM-------MKDGYNISV 1334
Query: 964 -----YIICEDGTSEAATQRAYN---IEELKNN-----------SKLKIDVNYYLSQQIH 1004
Y +C TSE A R +N E+L N+ L++D +YY+ QI
Sbjct: 1335 NKEIQYCVC---TSEDAC-RFFNKPGHEKLSNSLCCFSLSEIHKHNLRVDKDYYIRNQIL 1390
Query: 1005 PVVTRLLEPIEGTDAVRIAECLGL-DTSLYRS--QIKESIQQSEENILG-VGEAEE 1056
+ RL + IEGT A ++A C + D ++ QI+E+ Q E N+L + E+EE
Sbjct: 1391 SPINRLCQYIEGTSAEKLASCFNIYDVREIKTDLQIEENYQ--EANVLSLLNESEE 1444
Score = 43.9 bits (102), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 30/265 (11%)
Query: 306 ESQSIEEKVDVTNVES---VSSAVELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVH 362
E QS +++ V +E V + +++ PP + K E + + + E + ++
Sbjct: 266 EGQSSDQRSIVARLEENHPVETFLQMGDPPPATIKMKNEVRGSPCDG---EDDQEKSRLI 322
Query: 363 SRTADDSLP--LATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVI 420
+ + P L T+ E V F DI K ++ +FG+ K + S +
Sbjct: 323 TTIGMKNKPDELVTNEETGFVNVYIF-----DICKHRNSIIMFGRTLTKFK-IYRSVSIY 376
Query: 421 VQNIDRKIYLLPRSEHLKTKEPVSI------------AQVYSEFDQIATQYKILDFKSRK 468
++++ R Y L + K+ V I + EF + + I K K
Sbjct: 377 IEDMYRCYYFLLSKTMVYKKDGVEIKYGHKNYNTCIMSDFLEEFRAVRKYHNIESIKC-K 435
Query: 469 IEKKYAFNLPGVPDLSEYLEVRYSAKC-PALPSDLSGDTFSHVFGTKSSFLENLLLERKI 527
I K+ NL D Y ++ Y+ C P LSG T+S + +EN ++++ +
Sbjct: 436 IVKRRNLNLSS-SDEDVYAKIFYTYNCDPISERYLSGRTYSAFYCCNEDVIENFVIKKNL 494
Query: 528 KGPSWLEFPEAE-KFPSRISWCKYE 551
K P W++ + + +++C ++
Sbjct: 495 KLPCWVKVRGLKLNLTNNLTYCYFD 519
>gi|123425608|ref|XP_001306852.1| polymerase [Trichomonas vaginalis G3]
gi|121888449|gb|EAX93922.1| polymerase, putative [Trichomonas vaginalis G3]
Length = 1378
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 267/572 (46%), Gaps = 138/572 (24%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++I+ + G + SR L+G S R+E LL H F + YV+PDK K GK
Sbjct: 630 LQISQLSGALWSRVLLGKASPRSEALLAHEFINRGYVIPDKSQVKVS-----------GK 678
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R+ A Y GG VL+PK+GF++ ++ ++D+NSLYPSII++YNICFTT RM+ + +
Sbjct: 679 -REDAQYKGGHVLDPKRGFHENYVTVLDYNSLYPSIIRQYNICFTT---RMVANPN---- 730
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP------------------------- 714
++ +LP + +L+ R +VK MK+
Sbjct: 731 --------QNSAVLPKIMAELLNKRSEVKKDMKEKGDAQFQVTQQIEELENKIKAGEDSV 782
Query: 715 --------------NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTA 760
NL ++L +I+Q A+K+ ANSMYG LG+ SRF A LA +T
Sbjct: 783 GNKNHLEALKKKLDNLDTEL-RSLNIKQLAVKILANSMYGYLGYKGSRFPATKLAEEITK 841
Query: 761 KGREILLNTKSLVENLNYE------VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKL 814
KGRE L +VE+ YE ++YGDTDS+M+ C D + I
Sbjct: 842 KGREALQAVIDIVEHFQYEDSNQFSIVYGDTDSVMVDCMTRDETRARNVAMGICQAVELH 901
Query: 815 YKQ--------LELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDW 866
+K+ ++L +D ++K MLL+ KKKYAAL +L NG + + E+KG+D+VRRDW
Sbjct: 902 FKKQRKNGDAVMKLGLDHLFKKMLLVSKKKYAAL--DQLPNGNL--NLELKGLDMVRRDW 957
Query: 867 SQLASEAGKFVISQIL-------------------------------DEQSYTDYSLDDR 895
L FVIS + D++S +Y +
Sbjct: 958 CFLTRYLSYFVISTFMFGENSDDSIEKILNEMERVAAMLRNNGELPDDQKSEVEYETSND 1017
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
++ + + +K+R +P L+ ITK LT E Y D PH VA + + K+
Sbjct: 1018 MKVLMKAERKVRL---QSVIPQFLI-ITKMLTNRLETYKDNS--PHAAVARYMQDKMKKE 1071
Query: 956 LKQGDTISYIICEDG--------TSEAATQRAYNIEELKNNSKLK--------IDVNYYL 999
+ G TI YII +D SE ++R + + + K D+ +Y+
Sbjct: 1072 ISPGSTIEYIIAKDNFTPREELEGSEPMSERTQARTNIASKAVYKDLIKEVSDADIEWYI 1131
Query: 1000 SQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
+ QI V RL EP G + +A+ LG+ S
Sbjct: 1132 TNQIFNPVWRLCEPFGGMEKGMLAKALGVKYS 1163
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 294 EQAKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQTE 353
E A E++ + +ESQ E K +VE V + T P + K + +Q E
Sbjct: 155 EAAAAEVKKQKVESQKTEPKT--VSVEKVKRGPK--TEPRDRKPVIKPAEPVNIPDVQEE 210
Query: 354 ---PSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKE 410
P +E + S+ +S +EN F+M+ + ED G +YLFGK F K
Sbjct: 211 DPLPEIAETPITSKMQTESF----HNEN---FQMYLFNIVEDT----GKLYLFGKAFAK- 258
Query: 411 NNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIE 470
+ + CV++ N R I+ LP ++E D ++ + L K+
Sbjct: 259 SKKMVTVCVVISNPRRIIHFLP---------------TFNEIDDCKSEIQSLHQKAIVYP 303
Query: 471 K--KYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIK 528
+ KYAF + +S+++ + G ++ VFG SS E ++ KI
Sbjct: 304 EYLKYAFGDSDISQMSQWITAELPGNYDISKIPMIGKHYNKVFGWSSSLTECFIMRYKIM 363
Query: 529 GPSWLEF 535
GP W++F
Sbjct: 364 GPCWIKF 370
>gi|70953938|ref|XP_746040.1| DNA polymerase alpha [Plasmodium chabaudi chabaudi]
gi|56526541|emb|CAH74267.1| DNA polymerase alpha, putative [Plasmodium chabaudi chabaudi]
Length = 1674
Score = 226 bits (577), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 204/612 (33%), Positives = 319/612 (52%), Gaps = 114/612 (18%)
Query: 550 YEVQ--CNQMEKIR----ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG 603
YE+ CN ++ I +T + G + +R+L+ SE E+ LLH +H+K ++ P
Sbjct: 818 YEIYNVCNILQLIEKSRDLTKLSGYIWARSLLSYTSECVEYFLLHEYHKKKFITPIVVKK 877
Query: 604 KNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
K K E + K + A Y GGLVLEP G+YD +++ +DFNSLYPSII EYNICF
Sbjct: 878 KQKIENDT------NKSKNAAKYLGGLVLEPLCGYYDTYVLYLDFNSLYPSIIIEYNICF 931
Query: 664 TTIPVR-MLQDSDITT--LCEYLPE-----------HQVDT------------------- 690
+T ++ L SD T+ L E + + +Q+D
Sbjct: 932 STFNMKNYLASSDSTSKELQEEIEKKNIINYDESDVNQLDNKEEPVGDLSNIDYFDKTKP 991
Query: 691 GILPSEIKKLVESRRQVKALM--KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSR 748
GILPS +K+LVE R +K L+ ++ +LL+ ++ ++KL +NS+YGCLG ++R
Sbjct: 992 GILPSILKQLVEKRAFIKKLIASEKNKEKKELLL---VQSLSIKLISNSIYGCLGNTHNR 1048
Query: 749 FFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMI-----SCNVNDYDSVFK 802
F+A+ +A+ +T KGR +L +TK VE N VIYGDTDS+MI S ++N+Y K
Sbjct: 1049 FYAKYIASYITQKGRNLLQHTKFKVEKEFNLTVIYGDTDSIMIDTGIKSSDINNYKESLK 1108
Query: 803 IGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVV 862
+ + IK+ NK YK+LELD++ ++ +LLLKKKKYA + + GK E+KG++ +
Sbjct: 1109 LAHTIKNNINKNYKKLELDLECIFSKLLLLKKKKYACAKVIDPNLGKY--EYEMKGINFI 1166
Query: 863 RRDWSQLASEAGKFVISQILDEQSY-----------TDYSLDDRLQN-----IHEHMKKI 906
+RD+ +++ G ++ I + Y +++ D +QN IHE+++ I
Sbjct: 1167 KRDFCKISKLIGNELLRIIFSNKEYKPAQPNATTSSLNHADDLSIQNDLSEQIHEYLRSI 1226
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQG------D 960
+ N L ITK+LTK EY ++ +L HV VA R+ +K G
Sbjct: 1227 YHRIQNDEFDLEHYVITKKLTKNVHEYQEKNSLGHVLVAERM-------IKDGYNICVNK 1279
Query: 961 TISYIICEDGTSEAATQR-------------AYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
I Y +C T+E A + ++I E+K LKID +YY+ QI +
Sbjct: 1280 EIQYCVC---TNEDALKFYNKGNEKLNSSLCCFSISEIK-KYNLKIDKDYYIRNQILLPI 1335
Query: 1008 TRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEE-----NILG-VGEAEEVKYQF 1061
RL E IEGT+ +I+ C ++Y + ++ +Q+EE N+L + E+EE
Sbjct: 1336 NRLCEYIEGTNVEKISSCF----NIYNVKEIKTEEQNEESYLETNVLSLLSESEERFKNI 1391
Query: 1062 CDKFEFTCMNPS 1073
K TC N S
Sbjct: 1392 HLKGFLTCHNCS 1403
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 392 DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRS-------------EHLK 438
DI K ++ LFG+ K + S + ++++DR Y L EH K
Sbjct: 318 DICKHKNSIILFGRTLTKLK-RYKSISIYIEDMDRCYYFLLNKNKKYIKDGIEITYEHEK 376
Query: 439 TKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPAL 498
K + + V SEF +I +Y + KI + NL D Y +V YS +
Sbjct: 377 YKNFIMLDFV-SEFKKIR-EYHNIKMAKYKIVSRKNLNLSSSND-ELYAKVLYSYNYDNI 433
Query: 499 PSDLS-GDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE-KFPSRISWCKYE 551
+ GDT+S + +EN ++++ +K P W++ + + F + I++C ++
Sbjct: 434 SEQFAKGDTYSSFYCCNDDIVENFIIKKNMKMPCWIKVKDLKNNFSNNITYCYFD 488
>gi|82704805|ref|XP_726706.1| DNA polymerase alpha [Plasmodium yoelii yoelii 17XNL]
gi|23482227|gb|EAA18271.1| DNA polymerase alpha-related [Plasmodium yoelii yoelii]
Length = 906
Score = 223 bits (569), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 289/559 (51%), Gaps = 101/559 (18%)
Query: 550 YEVQ--CNQMEKIR----ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG 603
YE+ CN ++ + +T + G + +R+L+ SE E+ LLH +H+K Y+ P
Sbjct: 40 YEIYNVCNVLQLVEKSRDLTKLSGYIWARSLLSYTSECVEYFLLHEYHKKKYITPLVAKK 99
Query: 604 KNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
K K E + K + A Y GGLVLEP G+YD +++ +DFNSLYPSII EYNICF
Sbjct: 100 KPKIENDS------NKSKNTAKYLGGLVLEPLCGYYDTYVLYLDFNSLYPSIIIEYNICF 153
Query: 664 TTIPVRML-----------------------QDSDITTL-----------CEYLPEHQVD 689
+T ++ DSD+ L +Y +
Sbjct: 154 STFNMKNYLALSGSTSEEIQEETGKRNIIDYNDSDVNNLDKDDQVGDISNIDYFD--KTK 211
Query: 690 TGILPSEIKKLVESRRQVKALM--KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNS 747
GILPS +K+LVE R +K L+ ++ +LL+ ++ ++KL +NS+YGCLG ++
Sbjct: 212 PGILPSILKQLVEKRAFIKKLIASEKNKEKKELLL---VQSLSIKLISNSIYGCLGNTHN 268
Query: 748 RFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMI-----SCNVNDYDSVF 801
RF+A+ +A+ +T KGR +L +TK VE N +V+YGDTDS+MI S +VN+Y
Sbjct: 269 RFYAKYIASYITQKGRNLLQHTKFKVEKEFNLKVVYGDTDSIMIDTGIKSSDVNNYKESL 328
Query: 802 KIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDV 861
K+ + IK+ NK YK+LELD++ ++ +LLLKKKKYA + + GK E+KG++
Sbjct: 329 KLAHTIKNNINKNYKKLELDLECIFSKLLLLKKKKYACAKVIDPNLGKY--EYEMKGINF 386
Query: 862 VRRDWSQLASEAGKFVISQILDEQSYT---------------DYSLDDRL-QNIHEHMKK 905
++RD+ +++ G ++ I + Y D S+ + L + IHE+++
Sbjct: 387 IKRDFCKISKLIGNEMLRIIFSNKEYKPSQPNSSNTSLSHTDDLSIQNDLSEQIHEYLRS 446
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQG------ 959
+ + N L ITK+LTK EY ++ +L HV VA R+ +K G
Sbjct: 447 VYQRIQNDEFDLEHYVITKKLTKNVNEYQEKNSLGHVLVAERM-------IKDGYNVCVN 499
Query: 960 DTISYIICEDGTSEAATQRA----------YNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
I Y +C + + + ++I E+K LKID +YY+ QI + R
Sbjct: 500 KEIQYCVCRNEDALKFYNKGNEKLNSSLCCFSISEIK-KYNLKIDKDYYIRNQILLPINR 558
Query: 1010 LLEPIEGTDAVRIAECLGL 1028
L + IEGT+ +I+ C +
Sbjct: 559 LCQYIEGTNIEKISSCFNI 577
>gi|154418827|ref|XP_001582431.1| DNA polymerase family B containing protein [Trichomonas vaginalis
G3]
gi|121916666|gb|EAY21445.1| DNA polymerase family B containing protein [Trichomonas vaginalis
G3]
Length = 1367
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 239/452 (52%), Gaps = 44/452 (9%)
Query: 474 AFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKI----KG 529
+F L G + +R PA +DLS + FG K +EN+ + ++I K
Sbjct: 563 SFCLSGRIAVDIRTNLREFLNLPA--NDLSSVSLQE-FGIKRQQIENVDILKEINDRNKV 619
Query: 530 PSWLEFPEAEKFPSRISWCKYEVQCNQME-KIRITNVCGNVLSRTLMGGRSERNEFLLLH 588
S +EF E + + I K + N +E R++ + G + +TL S R E +LLH
Sbjct: 620 ISLIEFFERD---TNI-LTKLMEKTNLLEITFRLSQISGLLWCKTLKSKPSYRCESILLH 675
Query: 589 AFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDF 648
+F EK++VLPDK+ +A+ K Y G VL+PKKGFYD I+L+DF
Sbjct: 676 SFKEKNFVLPDKK-----------QKADFAPKSKLGKYRGATVLQPKKGFYDTIIVLLDF 724
Query: 649 NSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK 708
SLYPSII EYN+CFTT+ R +S+ C GILP ++ L + R ++K
Sbjct: 725 TSLYPSIISEYNLCFTTVDKRN-PNSEEAVNCGR-------KGILPEIMENLTKMRIELK 776
Query: 709 ALMKQPNLSSDLLMQYD---IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREI 765
M N D +D I+Q+A+K +NS+YG LGF SRF + +AAL+T +GR +
Sbjct: 777 NKM---NTLQDDKFNFDRFLIKQQAIKSLSNSIYGYLGFSLSRFASNEIAALITERGRFV 833
Query: 766 LLNTKSLVENLN-YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDG 824
L T VE+L + VIYGDTDS+M++ + KI N I + K YK L+L + G
Sbjct: 834 LQKTVETVESLGKFSVIYGDTDSVMVNTGTKSVEEAKKIANDISEKVTKQYKFLKLTVSG 893
Query: 825 VYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL-- 882
++ MLL+ KKKYA + + C +E+KG+D+VRRDW QL FV+ Q++
Sbjct: 894 LFTKMLLVAKKKYAV----TVYDDDNKCHREVKGLDMVRRDWCQLTKYLSSFVLDQMMNN 949
Query: 883 DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
D++S T + N+ + ++K D N
Sbjct: 950 DDRSLTVRNCLSEFHNVAKLLRKSNNDEQNSL 981
Score = 57.8 bits (138), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
H+KKI ++ L I +QL K EY+D++ PHV +ALR+ +K+ Q T
Sbjct: 1111 HLKKITKEM---------LIIYRQLNKKISEYSDKRNNPHVSIALRM-MKRGEKVPQHAT 1160
Query: 962 ISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
I I+ E + +E+K+ S +ID +YL QI P + RL P E +
Sbjct: 1161 IPMIVTSPDVRELCDKVKL-PDEVKDMS--EIDSQWYLVNQILPPIIRLFAPYEHVGSST 1217
Query: 1022 IAECLGLDTSLYRSQIKESIQQS 1044
I LGL + I +S + S
Sbjct: 1218 IGRSLGLTVMETKKNINDSYENS 1240
>gi|242223777|ref|XP_002477462.1| predicted protein [Postia placenta Mad-698-R]
gi|220722934|gb|EED77339.1| predicted protein [Postia placenta Mad-698-R]
Length = 559
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 141/213 (66%), Gaps = 10/213 (4%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE-----ETGEA 615
++TN+ GN ++TL GGR+ERNE++LLH FH Y+ PDK +GK E + E
Sbjct: 349 QLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKLWGKKAATAEKEAHDDDAEG 408
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 675
K KK Y GGLV EPK+G +DK+I++MDFNSLYPSIIQEYNI FTT V +D
Sbjct: 409 GKVTKSKKDKYKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTT--VDRAEDEV 466
Query: 676 ITTLCEYLPEH---QVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
E +PE V G+LP I LV RRQVK+LMK + L+Q+DI+Q ALK
Sbjct: 467 RADGEEAIPEPPSPGVGQGVLPRLIATLVNRRRQVKSLMKDRKATQAQLLQWDIKQMALK 526
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREI 765
LTANSMYGCLGF SRF+A+PLAAL T KGREI
Sbjct: 527 LTANSMYGCLGFEYSRFYARPLAALTTFKGREI 559
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 464 FKSRKIEKKYAFNLPGVPDL-SEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLL 522
++ + +++KYAF VP S++ +V Y P LPS++S S VFGT ++ E L+
Sbjct: 2 WRGKLVKRKYAFGEKDVPKGESQWFKVVYGFDEPQLPSNISSPNISRVFGTNTTAFELLV 61
Query: 523 LERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKI 560
L+RKI GP WL+ E + +SWCK E + + I
Sbjct: 62 LKRKIMGPCWLQVKEPKLEHKGVSWCKVEATVSNPKDI 99
>gi|2865226|gb|AAC38856.1| DNA polymerase alpha, partial [Paraurostyla viridis]
Length = 966
Score = 216 bits (550), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/251 (48%), Positives = 160/251 (63%), Gaps = 27/251 (10%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK--------EGEET 612
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ NK+ E E+
Sbjct: 717 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKQLTNKELKRGLFGEEDEQV 776
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PVR 669
+ KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ P +
Sbjct: 777 DDKKKGGKRKKAQYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRRPTK 836
Query: 670 MLQDSDI------------TTLCEYLPEHQVDT--GILPSEIKKLVESRRQVKALMKQPN 715
+DI LP+ T +LP+ ++ LV+ RR VK MK
Sbjct: 837 NFNGTDIKNEFKSEEDEENEEEQVELPDKNTKTNDAVLPNVLRDLVQKRRAVKEKMKSEK 896
Query: 716 LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN 775
++ L Q +IRQKA+KLTANSMYGCLGF +SRF A+ +AAL+T GRE LL TK + EN
Sbjct: 897 DATK-LQQLEIRQKAIKLTANSMYGCLGFQSSRFHAKAIAALITRTGRETLLKTKDIAEN 955
Query: 776 -LNYEVIYGDT 785
L + V+YGDT
Sbjct: 956 KLGFNVVYGDT 966
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 138/280 (49%), Gaps = 23/280 (8%)
Query: 296 AKVELQIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQ---VVEKKEHKCAEWEAIQT 352
AK +L + + QS + + E +++ P PQ + K+ + EA++
Sbjct: 203 AKSQLNQSSDDFQSAYDDSKMIENEQQEEPMKIEKQPSPQQDDWQKIKQQQMQNQEALKI 262
Query: 353 EPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENN 412
+ + + Q D LPL D F+ DA E+ Q +Y+FGK++ E
Sbjct: 263 DQNATLNQY-----DYPLPLNPD----GTLSFFWFDAHEENNGQ--DIYIFGKIYQPEVK 311
Query: 413 SHSSCCVIVQNIDRKIYLLP------RSEHLKTKEPVSIAQVYSEFDQIATQY--KILDF 464
S+ SC + V + R++Y LP RS K +E + ++ E D I + +I +
Sbjct: 312 SYVSCALKVNGMQREMYALPKIKNKARSAMSKEEEDKQVMNIFHELDDIRKKRFQQITKW 371
Query: 465 KSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLE 524
K + + +KYAF +P + L+V+Y P+LP+ L+G++F +FG S LE L+L+
Sbjct: 372 KCKPVMRKYAFEMPIQHGEHKLLKVKYDCTMPSLPAGLTGNSFECLFGANQSMLELLILK 431
Query: 525 RKIKGPSWLEFPEAEKFPS-RISWCKYEVQCNQMEKIRIT 563
RKIKGP W+ +K + +WC+ E+ N +++ +T
Sbjct: 432 RKIKGPCWITLKSPQKVTDFKKTWCRQEIFDNDPKQMEVT 471
>gi|68072149|ref|XP_677988.1| DNA polymerase alpha [Plasmodium berghei strain ANKA]
gi|56498307|emb|CAH97899.1| DNA polymerase alpha, putative [Plasmodium berghei]
Length = 827
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 287/555 (51%), Gaps = 98/555 (17%)
Query: 579 SERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGF 638
SE E+ LLH +H+K Y+ P K K E + K + A Y GGLVLEP G+
Sbjct: 3 SECIEYFLLHEYHKKKYITPLVSKKKQKIENDT------NKSKNTAKYLGGLVLEPLCGY 56
Query: 639 YDKFIILMDFNSLYPSIIQEYNICFTTIPVR-----------------------MLQDSD 675
YD +++ +DFNSLYPSII EYNICF+T ++ DSD
Sbjct: 57 YDTYVLYLDFNSLYPSIIIEYNICFSTFNMKHYLASSASTSEEIQEDIEKKNIVYYNDSD 116
Query: 676 ITTLCEYLPEHQVDT-----------GILPSEIKKLVESRRQVKALM--KQPNLSSDLLM 722
I L + + E D GILPS +K+LVE R +K L+ ++ +LL+
Sbjct: 117 INQL-DNIDEQVGDLSNIDYFDKTKPGILPSILKQLVEKRAFIKKLIASEKNKEKKELLI 175
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVI 781
++ ++KL +NS+YGCLG ++RF+A+ +A+ +T KGR +L +TK VE N +V+
Sbjct: 176 ---VQSLSIKLISNSIYGCLGNTHNRFYAKYIASYITQKGRNLLQHTKFKVEKEFNLKVV 232
Query: 782 YGDTDSLMI-----SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKK 836
YGDTDS+MI S + N+Y K+ + IK+ NK YK+LELD++ ++ +LLLKKKK
Sbjct: 233 YGDTDSIMIDTGIKSSDANNYKESLKLAHTIKNNINKNYKKLELDLECIFSKLLLLKKKK 292
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY--------- 887
YA + + GK E+KG++ ++RD+ +++ G ++ I + Y
Sbjct: 293 YACAKVIDPNLGKY--EYEMKGINFIKRDFCKISKLIGNELLRIIFSNKEYKPSQPNSSN 350
Query: 888 --TDYSLDDRLQN-----IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALP 940
++S D +QN IHE+++ + + N L ITK+LTK EY ++ +L
Sbjct: 351 ISLNHSDDISIQNDLSEQIHEYLRSVYQRIQNDEFDLEHYVITKKLTKNVNEYQEKNSLG 410
Query: 941 HVQVALRLNNTNSKKLKQG------DTISYIICEDGTSEAATQRA----------YNIEE 984
HV VA R+ +K G I Y +C + + + +++ E
Sbjct: 411 HVLVAERM-------IKDGYNVCVNKEIQYCVCRNEDALKFYNKGNEKLNSSLCCFSVGE 463
Query: 985 LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQS 1044
+K LKID +YY+ QI + RL + IEGT+ +I+ C + ++ + E I +S
Sbjct: 464 IK-KYNLKIDKDYYIRNQILLPINRLCQYIEGTNVEKISSCFNI-YNVKEIRTDEQIDES 521
Query: 1045 --EENILG-VGEAEE 1056
E N+L + E EE
Sbjct: 522 YLETNVLSLLSETEE 536
>gi|67602945|ref|XP_666513.1| DNA polymerase alpha, DNAPol alpha [Cryptosporidium hominis TU502]
gi|54657528|gb|EAL36288.1| DNA polymerase alpha, DNAPol alpha [Cryptosporidium hominis]
Length = 556
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 204/328 (62%), Gaps = 26/328 (7%)
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV-ENLNYEVI 781
Q +IRQ ALKLTANS+YGCLG+ NSRF+A+ LA+++T GR+IL TK V E +VI
Sbjct: 9 QLEIRQLALKLTANSLYGCLGYKNSRFYAKDLASIITFYGRQILQKTKLKVEEETKLQVI 68
Query: 782 YGDTDSLMISCNVND------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKK 835
YGDTDS+M++ N+ D Y V K+ +QIK NK Y +LELD+DGV + +LLLKKK
Sbjct: 69 YGDTDSIMVNTNIFDDGNGEGYSHVLKLASQIKQIVNKDYTKLELDLDGVLQRLLLLKKK 128
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
KYA + I ++ E KG+D+VRRDWS L + V +Q+L+ +++ +D
Sbjct: 129 KYACIQIVDFHRKQL--KLECKGLDLVRRDWSILT----RNVSTQLLNSL-FSNEPIDTV 181
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
+ NI ++ + L++ +PL ITK LTK P+ Y+D LPHV VA R+ ++
Sbjct: 182 ITNILNTLESLNEALNSNSIPLESFIITKTLTKLPQFYSDPYLLPHVIVAKRM-ISSGLP 240
Query: 956 LKQGDTISYIICEDGTSEAA----------TQRAYNIEELKNNSKLKIDVNYYLSQQIHP 1005
+ G I YIIC++ S+++ ++RAY+ EE+K+N L ID+ +Y +QQ+ P
Sbjct: 241 VSSGTEIPYIICKEVNSQSSEEVAPKSSILSKRAYSPEEVKSNG-LNIDIEWYKTQQLLP 299
Query: 1006 VVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
++RL PI G + RI +CLGL+ Y
Sbjct: 300 PLSRLCAPIPGLEISRIGQCLGLEYKQY 327
>gi|300709156|ref|XP_002996745.1| hypothetical protein NCER_100120 [Nosema ceranae BRL01]
gi|239606068|gb|EEQ83074.1| hypothetical protein NCER_100120 [Nosema ceranae BRL01]
Length = 866
Score = 215 bits (547), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 238/456 (52%), Gaps = 68/456 (14%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
++ + G +++ L R+E E+ L H ++K Y+LP E N +
Sbjct: 314 LSELSGYTINKVLNNNRAEIIEYTLFHELYDKKYLLP--------------PEVNVSVEK 359
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCE 681
Y GG V EP KG+YD ++L+DFNSLYPSIIQEYN+CF+
Sbjct: 360 ----YEGGKVFEPVKGYYDNLVLLLDFNSLYPSIIQEYNVCFSN---------------- 399
Query: 682 YLPE-HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
P+ + + G+LP + LV+ R++VK LM N D + Y IRQ ALK+ ANS+YG
Sbjct: 400 --PDFNSSEKGVLPKILANLVQRRKEVKKLM---NNDKDNKIYY-IRQMALKILANSIYG 453
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMISCN-VNDYD 798
LG+P SRF +AA +T KGREIL +TK +EN LNY+VIYGDTDS+MI +++ +
Sbjct: 454 SLGYPKSRFCNYKMAAFITEKGREILRDTKKTIENELNYKVIYGDTDSIMIDTGLIHNEE 513
Query: 799 SVFK---IGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQE 855
++ K I +I + N YK +E++++ ++ + L KK+Y I + + + +E
Sbjct: 514 NIIKAKEISQEISEKINLKYKNIEIELEKIFTKLFLYAKKRY----IGRYLDSNSVLHEE 569
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFV 915
KG++ ++R++ AS+ + +++IL LD +NI+ +K+ +L N V
Sbjct: 570 YKGIEALKRNFCPAASDIL-YKVNKIL---------LDSDNKNIYSLLKEEYNNLINRNV 619
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA 975
+ I L K +Y LP V + RL T K GD +SY+I +
Sbjct: 620 EDFV--INNTLNKPLSQYASNAPLPFVHLCNRL-KTKGIHYKVGDVVSYVIGKTENETDF 676
Query: 976 TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
RA+ + E K ID +YY+ QI P + R L
Sbjct: 677 YNRAFLLTE-----KCNIDYDYYVQNQIMPPLMRSL 707
>gi|2865238|gb|AAC38862.1| DNA polymerase alpha, partial [Urostyla grandis]
Length = 927
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/247 (49%), Positives = 164/247 (66%), Gaps = 28/247 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-YGKNKKEGEE-------- 611
++T++ GN+ R+L R+ERNE LLLH F+ K Y+ PDK + K+KK+ E+
Sbjct: 685 QLTSIAGNLWYRSLQNARAERNEMLLLHEFYGKKYLCPDKAPFSKDKKQFEDYENENLFG 744
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PV 668
EANK K RKKA YSGGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ P
Sbjct: 745 NEEANKKK-RKKAQYSGGLVIEPKAGFYDTIILLLDFNSLYPSIIQEYNLCFTTVNRRPS 803
Query: 669 RMLQDSDITTLCEYLPEHQVDT---------GILPSEIKKLVESRRQVKALMKQPNLSSD 719
+ +SDI + + + +V+ ILP+ +K LV+ R+ VK +K+ +D
Sbjct: 804 KNYDNSDIKSKQDENIDDEVELPDKGNTYKDAILPNVLKNLVQKRKIVKEQLKK---ETD 860
Query: 720 LL--MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-L 776
+ Q +IRQKA+KLTANSMYGCLGF +SRF A+ +AAL+T GRE LL TK + EN L
Sbjct: 861 PVKQQQLEIRQKAIKLTANSMYGCLGFSSSRFHAKAIAALITKTGRETLLKTKDIAENKL 920
Query: 777 NYEVIYG 783
+ V+YG
Sbjct: 921 GFNVVYG 927
Score = 106 bits (264), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 123/242 (50%), Gaps = 17/242 (7%)
Query: 335 QVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTAD-DSLPLATDHENKKVFRMFFLDAFEDI 393
QV ++K EW+ I+ + + + + DS PL + + K + DA E+
Sbjct: 205 QVEQEKMAIDEEWQLIKEQNEQMKVMTAASSESVDSYPLPVNKD--KELSLLLFDAHEE- 261
Query: 394 YKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP-------RSEHLKTKEPVSIA 446
V+LFGKV+ E + SC + V + R +Y LP R+E K +E
Sbjct: 262 -NMGLDVFLFGKVYQPELKQYVSCSLKVNGMQRIVYALPKVSKNKSRAELTKEEEQEMAL 320
Query: 447 QVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSG 504
+++SE D I I +K + ++KYAF +P + L+++Y + P LP++L+G
Sbjct: 321 KIFSELDGIRKNKFPSISQWKCKVAKRKYAFEMPIHHGEHQLLKIKYDSTMPPLPANLTG 380
Query: 505 DTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF---PSRISWCKYEVQCNQMEKIR 561
TF +F T+ S LE LLL++KIKGP W+ ++ ++ SWCK+++ + + I
Sbjct: 381 STFECLFNTQQSMLELLLLKQKIKGPCWITLKNVQQITQASNKRSWCKHDLVISSPKDIV 440
Query: 562 IT 563
IT
Sbjct: 441 IT 442
>gi|308158226|gb|EFO61009.1| DNA polymerase alpha subunit A [Giardia lamblia P15]
Length = 1730
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 177/605 (29%), Positives = 276/605 (45%), Gaps = 110/605 (18%)
Query: 577 GRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK----------GRKKAAY 626
GR+ R E L+L+ F Y+LPD +Y K ++G ++ + + K R A Y
Sbjct: 919 GRARRAESLILYNFFVMPYILPDIEY-KAHEQGAKSHDEVRSKDDTTADVTEEARYGAGY 977
Query: 627 SGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-PVRMLQDSDITTLCE---- 681
GG V++P GF+D+ +I++DFNSLYP+II+EYN+CFTT+ P + +D T+ +
Sbjct: 978 EGGYVMDPVAGFHDRIVIVLDFNSLYPNIIREYNLCFTTLDPQNYITGTDSTSTNDGSSS 1037
Query: 682 --------------------YLPEHQVDTGILPSEIKKLVESRRQVKALMKQ-------- 713
+ + T ILP I +L+ R+ +K +K
Sbjct: 1038 LVHLHADPQDAWNQTIEEEIRISKQISHTVILPKIIARLITQRQAIKGKIKDLEAMQVKD 1097
Query: 714 -PNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSL 772
L+ L M DI Q A+KL AN+MYG LG+ RF+ +AA + A+GR L ++
Sbjct: 1098 DKTLNQRLKM-LDISQLAIKLCANAMYGSLGYQYGRFYCPHVAARIPARGRLELTRASNI 1156
Query: 773 VENLNYEVIYGDTDSLMISCNVNDYD---------SVFKIGNQIKSECNKLYKQLELDID 823
+ ++VIYGDTDS+MI N+ +YD V I I S + K L+L +D
Sbjct: 1157 AKQQGFQVIYGDTDSIMIKTNL-EYDKSEKHKIMAQVKAIATTISSRVGEDRKYLQLGLD 1215
Query: 824 GVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILD 883
++ LLL+KKKYAA + + E KG+D+VRRDW ++ K + I+
Sbjct: 1216 YIFIKYLLLQKKKYAATRLFP----DFSVALEYKGLDLVRRDWCPISRTVSKRALEIIMG 1271
Query: 884 -EQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA--LP 940
Q+ +L + L H+ + RT ++TK LTK +Y+ A LP
Sbjct: 1272 YPQNVVASNLLNMLVASHKDILAFRTPAYE-LTYAQQFKMTKSLTKQLHQYSATAATQLP 1330
Query: 941 HVQVALRLNNTNSKKLKQGDTISYIICED--------GTSEAATQRAYN-IEELKNNSKL 991
HV VA+ + K ++ GD I Y++ + + Q +N +LK S
Sbjct: 1331 HVFVAMEMQRIG-KPVRIGDIIEYLVLSNKGVLALQVAMGKDGKQATFNDASDLKQASTS 1389
Query: 992 K--------------------------IDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAEC 1025
+D+ +Y+ QI P + R+ + A ++AEC
Sbjct: 1390 PSGDIARRSVPFEYYSQYLSGCPLVNVLDIEWYIKNQIIPPLQRVCSYVPDLSAGQLAEC 1449
Query: 1026 LGLDTSLYRSQIKESIQQSEENILGVGEAE---EV--KYQFCDKFEFTCMNPSCKQVNTV 1080
GLD+ R I +++ SEE + G E EV +Y C F + C K V
Sbjct: 1450 FGLDS---RDYIADTV--SEEQLTGFNRQEYSIEVRRRYGSCCCFIYHCACGGPKSVTAW 1504
Query: 1081 EAPTR 1085
P +
Sbjct: 1505 PPPIK 1509
>gi|429961811|gb|ELA41355.1| DNA polymerase (pol2) [Vittaforma corneae ATCC 50505]
Length = 933
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 253/513 (49%), Gaps = 101/513 (19%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+ + G +L+R L R+ER E+ L+H + Y+ P N K
Sbjct: 296 MAEISGYLLNRCLGNCRAERIEYTLMHELYAGGYLFPPVTPKMNVK-------------- 341
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR-----------M 670
YSGGLVL+P +GFY+ ++L+DFNSLYPSIIQE+N+CF+T+ +
Sbjct: 342 ----YSGGLVLDPVQGFYEDIVLLLDFNSLYPSIIQEFNVCFSTVGSSRFYITEDNAEDV 397
Query: 671 LQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
L + +I + + + DT LP ++ LV RR VK L++ S + M DIRQ+A
Sbjct: 398 LNNPEIVS---SVADRHADT-FLPRILRSLVRRRRSVKELLRSAK-SPEERMALDIRQRA 452
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LKLTANS+YGCLGF SRF +AA +TAKGRE+L TK E L +VIYGDTDS+MI
Sbjct: 453 LKLTANSIYGCLGFTGSRFCNFEMAAFITAKGRELLNETKIAAEQLGMKVIYGDTDSIMI 512
Query: 791 SCNVND----YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
Y + S+ N Y + ++++ V+K +LL KKKYAAL
Sbjct: 513 HTRYPGTKEYYGRAVDSAKALVSKINSRYSSIGIELEKVFKKLLLYTKKKYAALVFDM-- 570
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNI------- 899
NG I E KG+D+VRRD+ +++ + V++ +L+++ +Y D + +I
Sbjct: 571 NGSCI---ETKGIDIVRRDFCSASTDLSRSVLNVMLEDRE--EYRSDVKTTSIAVNNPFD 625
Query: 900 --------------------------------------HEHMKKIRTDLDNGFV--PLTL 919
E + I +D + P+
Sbjct: 626 GCSAKTGRGVGINLLEDSDEAGDKARCSALKKNNTMETAEKIYGICSDFYSTLFARPVED 685
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEAATQR 978
I+ L++ YT+ LPHV +ALRL + + Q D +SY+I E DG + R
Sbjct: 686 FIISSVLSRDISAYTNATNLPHVNLALRLRASKNITYHQDDVVSYVIGEGDG---PISYR 742
Query: 979 AYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
AY+ +E K+KID YY+ Q+ P + RL+
Sbjct: 743 AYHPDE-----KVKIDYQYYIKNQLLPSLYRLV 770
>gi|253743796|gb|EET00097.1| DNA polymerase alpha subunit A [Giardia intestinalis ATCC 50581]
Length = 1728
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 177/605 (29%), Positives = 275/605 (45%), Gaps = 109/605 (18%)
Query: 577 GRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK----------GRKKAAY 626
GR++R E L+L+ F Y++PD +Y ++ E +K K GR Y
Sbjct: 920 GRAKRAESLILYNFFAMPYIIPDIEYKIYEQNTGGRDEIHKAKDDANTDVVEEGRHGVGY 979
Query: 627 SGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----------PVRM------ 670
GG V++P GF+DK +I++DFNSLYP+II+EY++CFTT+ P +
Sbjct: 980 EGGYVMDPVTGFHDKIVIVLDFNSLYPNIIREYSLCFTTLDPKNYIPGINPANINDSSPS 1039
Query: 671 -------LQDSDITTLCE--YLPEHQVDTGILPSEIKKLVESRRQVKALMK--------- 712
LQDS + E ++ + T ILP I +L+ R+ +K +K
Sbjct: 1040 LSHLQSDLQDSWTQAIEEEIHISKQINHTVILPRIIARLIIQRQTIKTKIKDLEAMQVED 1099
Query: 713 QPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSL 772
L+ L M DI Q A+KL AN+MYG LG+ RF+ +AA + A+GR L ++
Sbjct: 1100 DKTLNQRLKM-LDISQLAIKLCANAMYGSLGYQYGRFYCPHVAARIPARGRLELTRASNI 1158
Query: 773 VENLNYEVIYGDTDSLMISCNVNDYD---------SVFKIGNQIKSECNKLYKQLELDID 823
+ ++VIYGDTDS+MI N+ +Y V I I S + K L+L +D
Sbjct: 1159 AKQQGFQVIYGDTDSIMIKTNL-EYSKPEKHKIMAQVKTIATTISSRVGEDRKYLQLGLD 1217
Query: 824 GVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILD 883
++ LLL+KKKYAA + + E KG+D+VRRDW ++ K + I+
Sbjct: 1218 YIFIKYLLLQKKKYAATRLFP----DFSVALEYKGLDLVRRDWCLISRNISKKALEIIMG 1273
Query: 884 -EQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA--LP 940
Q+ +L L ++ + RT + ++TK LTK +Y+D A LP
Sbjct: 1274 YPQNVVASNLLSMLVASYKDILASRTP-SQELKYVQHFKMTKSLTKQLHQYSDTAATQLP 1332
Query: 941 HVQVALRLNNTNSKKLKQGDTISYIICED-GTS-----------EAATQRAYNIEELKNN 988
HV VA + K ++ GD I Y++ G S +A + ++++ N
Sbjct: 1333 HVFVAKEMQRVG-KAVRVGDIIEYLVLSTKGISALQAKMSKDSKQAVSNDTSDMKQTSTN 1391
Query: 989 SKLKI-----------------------DVNYYLSQQIHPVVTRLLEPIEGTDAVRIAEC 1025
I D+ +Y+ QI P + R+ + A ++AEC
Sbjct: 1392 PSGDIAKRSIPFEYYSQYLSACPLVNVLDIEWYIKNQIIPPLQRVCSYVPDLSAGQLAEC 1451
Query: 1026 LGLDTSLYRSQIKESIQQSEENILGVGEAE-----EVKYQFCDKFEFTCMNPSCKQVNTV 1080
GLD+ R I ++I SE+ I+ E +Y C F + C S K V
Sbjct: 1452 FGLDS---RDYITDTI--SEDQIISFNRREYSIDVRRRYGSCCCFIYHCTCGSSKSVTAW 1506
Query: 1081 EAPTR 1085
P +
Sbjct: 1507 PPPLK 1511
>gi|2865236|gb|AAC38861.1| DNA polymerase alpha, partial [Uroleptus gallina]
Length = 973
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/252 (46%), Positives = 154/252 (61%), Gaps = 29/252 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNK--KEG-------EE 611
++TN+ GN+ R+L +ERNE LLLH F +K ++LPDK+ K K G E+
Sbjct: 723 QLTNIAGNLWFRSLQNVCAERNEMLLLHEFKKKKFILPDKKAASAKELKRGVMGEEFEEQ 782
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML 671
KG RKKA YSGGLV++PK FYD I+L+DFNSLYPSIIQ N+CFTT+ R
Sbjct: 783 DNNGKKGPKRKKAQYSGGLVIDPKARFYDNIILLLDFNSLYPSIIQVLNLCFTTVSRRPT 842
Query: 672 QDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALMKQ 713
++ D + L LP+ V+ +LP+ ++ LV+ RR VK MK
Sbjct: 843 KNFDGSELKNAFKVQDDDNDDEEESVELPDKNVNLKDAVLPNVLRDLVQKRRAVKDKMKN 902
Query: 714 PNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV 773
+ L Q +IRQKA+KLTANSMYGCLGF +SRF A+ +AAL+T GRE LL TK +
Sbjct: 903 EK-DTVKLQQLEIRQKAIKLTANSMYGCLGFGSSRFHAKAIAALITRTGRETLLRTKDIA 961
Query: 774 EN-LNYEVIYGD 784
EN L + V+YGD
Sbjct: 962 ENKLGFNVVYGD 973
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 384 MFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP------RSEHL 437
+++DA E+ +Y+FGKVF + N + SC + + + R+++ LP R
Sbjct: 289 FYWIDAHEE--NNGSDLYIFGKVFQPQINQYVSCALKINGMQREVFALPKQTAKARGTLT 346
Query: 438 KTKEPVSIAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKC 495
K +E + V E + I + I ++ + + +KYAF +P +L+++Y A
Sbjct: 347 KEEESKLVRDVQLELEDIRKKRYSNIAKWRCKPVTRKYAFEMPIQHGEHLFLKIKYDATM 406
Query: 496 PALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWCKYEVQC 554
P LPS+L+G+TF +FG S LE +L+R+IKGP W+ A+K + +WC+ E+
Sbjct: 407 PPLPSNLTGNTFECIFGANQSMLELFILKRRIKGPCWMTIKNAQKVTDFKKTWCRQEIFV 466
Query: 555 NQMEKIRIT 563
+ + + +T
Sbjct: 467 DNFKNVEVT 475
>gi|159108384|ref|XP_001704463.1| DNA polymerase alpha subunit A [Giardia lamblia ATCC 50803]
gi|157432527|gb|EDO76789.1| DNA polymerase alpha subunit A [Giardia lamblia ATCC 50803]
Length = 1730
Score = 206 bits (523), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 181/604 (29%), Positives = 277/604 (45%), Gaps = 108/604 (17%)
Query: 577 GRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEG---------EETGEANKGKGRKKAAYS 627
GR+ R E L+L+ F Y+LPD +Y +++ ++T + R A Y
Sbjct: 919 GRARRAESLILYNFFVMPYILPDTEYKTHEQSAKSHDEFRPKDDTAADATEEARHGAGYE 978
Query: 628 GGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----------------PVRM 670
GG V++P GF+DK +I++DFNSLYP+II+EY++CFTT+ P +
Sbjct: 979 GGYVMDPVAGFHDKIVIVLDFNSLYPNIIREYSLCFTTLDPQNYVTWPDPTNTTDDPSGL 1038
Query: 671 L------QDSDITTLCEYL-PEHQVD-TGILPSEIKKLVESR----RQVKAL----MKQP 714
+ QD+ T+ E + Q+ T ILP I +L+ R R++K L +K
Sbjct: 1039 IHLHADPQDTWNQTIEEEVRASKQISHTVILPKIIARLITQRQAIKRKIKDLEAMQVKDD 1098
Query: 715 NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE 774
S L +I Q A+KL AN+MYG LG+ RF+ +AA + A+GR L ++ +
Sbjct: 1099 KTISQRLKMLEISQLAIKLCANAMYGSLGYQYGRFYCPHVAARIPARGRLELTRASNIAK 1158
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDS--------VFKIGNQIKSECNKLYKQLELDIDGVY 826
Y+VIYGDTDS+MI N+ S V I I S + K L+L +D ++
Sbjct: 1159 QQGYQVIYGDTDSIMIKTNIEYNKSEKHKIMAQVKAIATTISSRVGEDRKYLQLGLDYIF 1218
Query: 827 KYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILD-EQ 885
LLL+KKKYAA + + E KG+D+VRRDW ++ K + I+ Q
Sbjct: 1219 IKYLLLQKKKYAATRLFP----DFSVALEYKGLDLVRRDWCPISRTISKRALEIIMGYPQ 1274
Query: 886 SYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY--TDRKALPHVQ 943
+ +L + L ++ + RT ++TK LTK +Y T LPHV
Sbjct: 1275 NVIASNLLNMLVASYKDILASRTPARE-LKYAQQFKMTKSLTKQLHQYSATAVTQLPHVF 1333
Query: 944 VALRLNNTNSKKLKQGDTISYIICEDGTSEA--------ATQRAYN-IEELKNNSKLK-- 992
VA L K ++ GD I Y++ + A + Q A+N +LK S
Sbjct: 1334 VARELQRVG-KPVRIGDIIEYLVLSNKGISALQVAMGKDSKQAAFNDAPDLKQASVSSSG 1392
Query: 993 ------------------------IDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
+D+ +Y+ QI P + R+ + A ++AEC GL
Sbjct: 1393 DIARRSIPFEYYSQYLSGCPLVNVLDIEWYIKSQIIPPLQRVCSYVPDLSAGQLAECFGL 1452
Query: 1029 DTSLYRSQIKESIQQSEENILGVGEAE---EVKYQF----CDKFEFTCMNPSCKQVNTVE 1081
D+ R I +++ SEE + G E EV+ ++ C + C NP K V
Sbjct: 1453 DS---RDYIADTV--SEEQLTGFNRQEYSIEVRRRYGSCCCFIYHCACGNP--KSVTAWP 1505
Query: 1082 APTR 1085
P R
Sbjct: 1506 PPLR 1509
>gi|378755233|gb|EHY65260.1| hypothetical protein NERG_01706 [Nematocida sp. 1 ERTm2]
Length = 996
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 240/480 (50%), Gaps = 59/480 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
+++ + G +L+ G +S+R E+LLLH + Y++P K GK
Sbjct: 408 KLSYITGALLNSIFHGFKSDRVEYLLLHRMRDNQYLIPKKLLA--------------GKV 453
Query: 621 RKKAAYSGGLVLEPKKGFY-DKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
K Y GG V K G Y D +I L DFNSLYPSIIQEYN+CF+T + +++
Sbjct: 454 DSKDTYEGGYVFLEKPGMYSDTYISLFDFNSLYPSIIQEYNVCFSTSHDLSMDSKNVSR- 512
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+LP ++ LV R ++K MK D+L+ +I Q+A+KL AN +Y
Sbjct: 513 ----------PSLLPGALRDLVAQRTEIKKQMKAGK--GDVLL-LEIEQRAVKLVANCIY 559
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
GCLGF RF+ + +AA +T GR IL +TK+ +E+ Y VIYGDTDS+M+ + +
Sbjct: 560 GCLGFKGFRFYNKAMAAFITECGRSILKDTKTTLESNGYRVIYGDTDSVMVDTGIGTSSA 619
Query: 800 --VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
K+ ++I + Y+ ++L + + ++++ KKKY + S +N E K
Sbjct: 620 PPSNKLLDEISDSISCKYRTIKLGFEKTFLKLVMMAKKKYFGVVHSNGAN-----EVEEK 674
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G++ RRDW ++A E VI +L Y+ ++ L + + +KI+T F+
Sbjct: 675 GLETGRRDWCEMAQEGISAVIRVLL----YSTAPEEEILLLLAKLKEKIQTHNKESFL-- 728
Query: 918 TLLEITKQLTKAPEEY--TDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-EDGTSEA 974
I K++ KAPE Y +L V +ALRL + + GD IS+++ +G S
Sbjct: 729 ----IRKKIQKAPESYNAVQGTSLQQVSLALRLQKERNFTFQAGDIISFVMALHNGVS-- 782
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYR 1034
RA + E +I +YY+ Q+ P + R+LE I + LGL S R
Sbjct: 783 ---RAELVSECG-----EIHYDYYMKMQVFPPIQRMLEYFPSISIESIQKLLGLYVSHSR 834
>gi|429964510|gb|ELA46508.1| DNA polymerase (pol2) [Vavraia culicis 'floridensis']
Length = 813
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 253/468 (54%), Gaps = 78/468 (16%)
Query: 565 VCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKA 624
+ G+ L RT+ R+ER E+LL+H+ ++K +++ ++ G N
Sbjct: 276 ITGHQLDRTITF-RAERTEYLLMHSMYQKKWLICRERKGNNH------------------ 316
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS-DITTLCEYL 683
Y+GGLVLEP+ G ++ IIL+DFNSLYPSII E N+CF+TI + ++ C
Sbjct: 317 -YTGGLVLEPRTGLFEN-IILIDFNSLYPSIIIEENLCFSTINRKARAGKENVDGACAGN 374
Query: 684 PEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLG 743
E + +LP+ + L+ R+++K + + S+ YD RQKALK+TAN++YGCLG
Sbjct: 375 TE---EMALLPAILSTLITRRKKLKQELVKKYSST-----YDARQKALKITANAIYGCLG 426
Query: 744 FPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI--SCNVNDYDSVF 801
RF +AA +T +GRE+L+ KS +E + V+YGDTDSLMI C+V + S
Sbjct: 427 -STGRFSNLEMAAFITGRGRELLMKAKSEIEKIGLTVLYGDTDSLMIKSDCSVEEIPS-- 483
Query: 802 KIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDV 861
+ +I + N YK + ++++ +++ ++L KKKYA +++ K ++I +KG++
Sbjct: 484 -LAQKICASINNHYKFISIEMEDIFERIILYTKKKYAGITVKK----EII----LKGIE- 533
Query: 862 VRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLE 921
RRD+ L+++ F+ I + +D++L + + + +++T+L +LE
Sbjct: 534 -RRDYCMLSNQ---FIYDVIWILLTSSDHNL------VMKRLIELKTNLKTYGKENFVLE 583
Query: 922 ITKQLTKAPEEYTDRKALPHVQVALRLN---NTNSKKL---KQGDTISYIICEDGTSEAA 975
+ L K PE+YT + P VQ+ALR+N N+ K+ K+ D ISY++ DG
Sbjct: 584 --RMLNKDPEKYTTPEGSPQVQLALRINEHITKNNLKMPLYKKNDIISYVMGHDGA---- 637
Query: 976 TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIE--GTDAVR 1021
L+I+ YYL QQ RL+ ++ DAVR
Sbjct: 638 ---------FLPTESLEINYEYYLEQQFLTPFFRLVGVLKNFNVDAVR 676
>gi|83318408|gb|AAI08749.1| Unknown (protein for IMAGE:6640027), partial [Xenopus laevis]
Length = 301
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 162/298 (54%), Gaps = 16/298 (5%)
Query: 949 NNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
N+ +K+K GDTISY+IC+DG++ +A+QRAY E+L+ L ID YYLSQQ+HPVV
Sbjct: 1 NSQGGRKVKAGDTISYVICQDGSNLSASQRAYAQEQLQKQENLSIDTQYYLSQQVHPVVA 60
Query: 1009 RLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGE----AEEVKYQFCDK 1064
R+ EPI+G D+ IA LGLD S +R+ QQ EEN +G +E KY+ C++
Sbjct: 61 RICEPIDGIDSALIAMWLGLDPSQFRAH--RHYQQDEENDALLGGPSQLTDEEKYRDCER 118
Query: 1065 FEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNK 1124
F+F C P C N + S + L C PEC P Y+ + NKL D+ +
Sbjct: 119 FKFFC--PKCGTENIYDNVFDGSGLQIEPGLKRCSKPECDASPLDYVIQVHNKLLLDIRR 176
Query: 1125 YIVKYYEGWLKCEDPGCSDLTRRCPLGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFH 1182
YI KYY GWL CE+ C + TRR PL +C C K L Y E LY QL F+
Sbjct: 177 YIKKYYSGWLVCEEKTCQNRTRRLPLSFSRNGPICQACSKATLRSEYPEKALYTQLCFYR 236
Query: 1183 YICDITKALTKSDTPS------IKFDSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
+I D AL K + K E+ Y K+K V++ L S Y+ V+L KLF
Sbjct: 237 FIFDWDYALEKVVSEQERGHLKKKLFQESENQYKKLKSTVDQVLSRSGYSEVNLSKLF 294
>gi|2865232|gb|AAC38859.1| DNA polymerase alpha [Halteria sp.]
Length = 946
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 167/278 (60%), Gaps = 42/278 (15%)
Query: 546 SWCKYEVQCN----QMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ 601
+W + + C+ + K ++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+
Sbjct: 671 AWLTFTLMCHLSIIPLTK-QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKK 729
Query: 602 Y--GKNKKE---GEE---TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYP 653
G++ ++ G+E + K RKKAAY+GGLV+EPK GFYD I+L+DFNSLYP
Sbjct: 730 QLSGRDMRKSMFGDEDDVVEQGGKKGKRKKAAYAGGLVIEPKAGFYDSIILLLDFNSLYP 789
Query: 654 SIIQEYNICFTTI---PVRMLQDSDI----------------------TTLCEYLPEHQV 688
SIIQEYN+CFTT+ P +DI LP+ V
Sbjct: 790 SIIQEYNLCFTTVNRRPTSNFNGTDIQNQFKIKAKKKEDDDQAEDEENEEEQVELPDKGV 849
Query: 689 DT--GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPN 746
+T +LP+ ++ LV+ R+ VK MK L Q +IRQKA+KLTANSMYGCLGF +
Sbjct: 850 NTKDAVLPNVLRDLVQKRKAVKDKMKSER-DPVKLQQLEIRQKAIKLTANSMYGCLGFSS 908
Query: 747 SRFFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYG 783
SRF A+ +AAL+T GR LL+TK + EN L + V+YG
Sbjct: 909 SRFHAKAIAALITKTGRNTLLSTKEIAENKLGFNVVYG 946
Score = 109 bits (273), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 217/492 (44%), Gaps = 85/492 (17%)
Query: 105 WIDDDGGDGYVEDGREIFDDDIEDVPQKKEKHDKRKKN-----------------KNIQN 147
+I DD G GY + G EI++DD ED +K+ KRK + N
Sbjct: 1 FIVDDDGLGYRDHGGEIWEDDDEDGDHANKKNKKRKLDVSPIFPLMIVQPTEQSITNFMM 60
Query: 148 PNAKGDIQKLLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPK 207
P + + +K K K EE + D++ +LL +++ A L+ + ++ ++
Sbjct: 61 PQSTLNKKKAPPAAKAKPKVTEE---QSRDIMNNLLGQLDNQEAEELE-DINSSAVLAEL 116
Query: 208 EEPPAPTAKEYLANFSKPIKVEKKIEKPIKKE--PSPLKDEIKSNDSVMEVEMNVAEQSK 265
+P A F+K ++ K P+ P P+ + + + N+ + +
Sbjct: 117 NKPTA---------FNKEDQIYNKYNVPLATTTTPQPVAEPV--------TQQNIFSKKR 159
Query: 266 EEPVDDGLWEQMQIDDWDNSQQTQDVLPEQAKVELQIEAIESQSIEEKVDVTNVESVSSA 325
+ G E+ Q ++ + AK E ++ A E QS +++ + ++SV++
Sbjct: 160 KADEISGAGEEQQ-------PKSANTTYFDAKSEQEVPASEYQSAQDESKM-EIDSVAT- 210
Query: 326 VELSTSPPPQVVEKKEHKCAEWEAIQTEPSTSEPQVHSRTAD----DSLPLATDHENKK- 380
K +W+ I+ + + + D LPL H NK
Sbjct: 211 -----------------KGDDWQKIRQQQQQQQAAQTAPQIDPLQLADLPL---HLNKDG 250
Query: 381 VFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP------RS 434
++ DA E+ Q +Y+FGKV+ E SC + V + R+IY LP RS
Sbjct: 251 TLSFYWFDAHEENNGQ--DLYIFGKVWQPELKQFVSCSLKVNGMQREIYALPKLKGKARS 308
Query: 435 EHLKTKEPVSIAQVYSEFDQIATQY--KILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYS 492
K +E + +++E + I + I +K + + +KYAF +P ++L+++Y
Sbjct: 309 ALSKEEEDKLVMNIFTELEDIRKRKYPAITKWKCKPVTRKYAFEMPIQHGEHKFLKIKYD 368
Query: 493 AKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK-FPSRISWCKYE 551
A P+LP L+G+TF +FG S LE +L+RKIKGP W+ K +R +WC+ E
Sbjct: 369 ATMPSLPYGLTGNTFECLFGANQSLLELFILKRKIKGPCWMTIRNPVKESEARKTWCRQE 428
Query: 552 VQCNQMEKIRIT 563
+ N ++ IT
Sbjct: 429 IFINDPKQAEIT 440
>gi|2865228|gb|AAC38857.1| DNA polymerase alpha, partial [Stylonychia lemnae]
Length = 1017
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 157/254 (61%), Gaps = 32/254 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ--YGKNKKEG-------EE 611
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ K+ K G ++
Sbjct: 765 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPSAKDFKRGFMEENEEQD 824
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PV 668
T KG RKKA Y+GGLV+EPK GFYD ++L+DFNSLYPSIIQEYN+CFTT+ P
Sbjct: 825 TKGGKKGGKRKKAKYAGGLVIEPKAGFYDNIVLLLDFNSLYPSIIQEYNLCFTTVNRRPT 884
Query: 669 RMLQDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKAL 710
+ SD+ + LP+ V+T +LP+ ++ LV+ RR VK
Sbjct: 885 KKFDGSDLKNQFKVADNEDHQNDDEVEDVELPDKNVNTKDAVLPNVLRDLVQKRRAVKEK 944
Query: 711 MKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTK 770
MK L Q + RQKA+KLTANSMYGCLGF +S+F A +AAL+T GRE LL TK
Sbjct: 945 MKNEK-DPVKLQQLENRQKAIKLTANSMYGCLGFSSSKFHASAIAALITKTGRETLLRTK 1003
Query: 771 SLVEN-LNYEVIYG 783
+ EN L + V+YG
Sbjct: 1004 DIAENKLGFNVVYG 1017
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 23/235 (9%)
Query: 346 EWEAI--QTEPSTSE-PQVHSRTADD----SLPLATDHENKKVFRMFFLDAFEDIYKQPG 398
+W I Q + +TSE + ++A D LPL D +++DA E+
Sbjct: 289 DWAQIKQQNQQATSEFKTMEQKSAMDIQEFDLPLNQD----GTLSFYWIDAHEE--NNGA 342
Query: 399 TVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHLK---TKEPVS--IAQVYSEFD 453
+Y+FGK++ E SC + V + R++Y LP+ + + TKE S + V E D
Sbjct: 343 DLYIFGKIYQPEIKQFVSCSMKVNGMQRELYALPKMQKISRDLTKEEESQLVRSVQLELD 402
Query: 454 QIATQYK----ILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSH 509
I + K I ++ + + +KYAF +P +L+++Y A LPS + G+TF
Sbjct: 403 DIRKRKKRFQGITKWRCKAVTRKYAFEMPIQHGEHLFLKIKYDATMTPLPSTVYGNTFEC 462
Query: 510 VFGTKSSFLENLLLERKIKGPSWLEFPEAEKFPS-RISWCKYEVQCNQMEKIRIT 563
+FG S LE +L+RKIKGP W+ +K + +WC+ E++ + + +T
Sbjct: 463 LFGCNQSMLELFILKRKIKGPCWMTIKNPKKVKDFKKTWCRQEIEIDNPQFAEVT 517
>gi|387597306|gb|EIJ94926.1| hypothetical protein NEPG_00451 [Nematocida parisii ERTm1]
Length = 870
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 235/479 (49%), Gaps = 63/479 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++ + G +L+ G +S+R E+LLLH + Y++P K G GK
Sbjct: 282 KLAYITGALLNPIFHGYKSDRVEYLLLHRMRDNQYLIPRKSLG--------------GKI 327
Query: 621 RKKAAYSGGLVLEPKKGFY-DKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
K Y GG V K G Y +++I L DFNSLYPSIIQEYN+CF+T + ++ +T
Sbjct: 328 SDKDTYEGGYVFLDKPGVYSERYIALFDFNSLYPSIIQEYNVCFSTSHCLKMDNTKEST- 386
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+LP ++ LV R ++K MK ++ LL +I Q+A+KL AN +Y
Sbjct: 387 ----------PSLLPGALRDLVTQRSEIKRQMKSGAGNTQLL---EIEQRAVKLVANCIY 433
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI--SCNVNDY 797
GCLGF RF+ + +AA +T GR IL +TK+ +E+ +VIYGDTDS+M+ + D
Sbjct: 434 GCLGFKGFRFYNKTMAAFITECGRTILKDTKATLESKGLQVIYGDTDSVMVDTGIKITDP 493
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
+ + I + Y ++L + + ++++ KKKY I L+ +I E K
Sbjct: 494 SPSLETLSGISELISCKYNNIKLGFEKTFSKLVMMAKKKY--FGIYCLNGADVI---EEK 548
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G++ RRDW +A E V+ +IL + + L ++ E MK D ++
Sbjct: 549 GLETGRRDWCLVARETISAVM-RILLFSPMPEEEILRMLSSLKESMKS--RDKESYL--- 602
Query: 918 TLLEITKQLTKAPEEY--TDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-EDGTS-- 972
I K++ K PE Y +L V +ALRL GD IS++I +G S
Sbjct: 603 ----IRKKIQKNPESYNAVQTTSLQQVCLALRLKQERGLTFHGGDIISFVIALHNGISRP 658
Query: 973 EAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
E ++R+ +I +YY+ Q+ P + R+LE I + LGL TS
Sbjct: 659 ELVSERS------------EIHYDYYMKLQVFPPLQRMLEHFSSISIENIQKVLGLYTS 705
>gi|387593650|gb|EIJ88674.1| hypothetical protein NEQG_01364 [Nematocida parisii ERTm3]
Length = 641
Score = 199 bits (506), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 235/479 (49%), Gaps = 63/479 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++ + G +L+ G +S+R E+LLLH + Y++P K G GK
Sbjct: 66 KLAYITGALLNPIFHGYKSDRVEYLLLHRMRDNQYLIPRKSLG--------------GKI 111
Query: 621 RKKAAYSGGLVLEPKKGFY-DKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
K Y GG V K G Y +++I L DFNSLYPSIIQEYN+CF+T ++++ +T
Sbjct: 112 SDKDTYEGGYVFLDKPGVYSERYIALFDFNSLYPSIIQEYNVCFSTSHCLKMENTKEST- 170
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+LP ++ LV R ++K MK + LL +I Q+A+KL AN +Y
Sbjct: 171 ----------PSLLPGALRDLVTQRSEIKRQMKSGAGNIQLL---EIEQRAVKLVANCIY 217
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI--SCNVNDY 797
GCLGF RF+ + +AA +T GR IL +TK+ +E+ +VIYGDTDS+M+ + D
Sbjct: 218 GCLGFKGFRFYNKTMAAFITECGRTILKDTKATLESKGLQVIYGDTDSVMVDTGIKITDP 277
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
+ + I + Y ++L + + ++++ KKKY I L+ +I E K
Sbjct: 278 SPSLETLSGISELISCKYNNIKLGFEKTFSKLVMMAKKKY--FGIYCLNGADVI---EEK 332
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G++ RRDW +A E V+ +IL + + L ++ E MK D ++
Sbjct: 333 GLETGRRDWCLVARETISAVM-RILLFSPMPEEEILRMLSSLKESMKS--RDKESYL--- 386
Query: 918 TLLEITKQLTKAPEEY--TDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC-EDGTS-- 972
I K++ K PE Y +L V +ALRL GD IS++I +G S
Sbjct: 387 ----IRKKIQKNPESYNAVQTTSLQQVCLALRLKQERGLTFHGGDIISFVIALHNGISRP 442
Query: 973 EAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTS 1031
E ++R+ +I +YY+ Q+ P + R+LE I + LGL TS
Sbjct: 443 ELVSERS------------EIHYDYYMKLQVFPPLQRMLEHFSSISIENIQKVLGLYTS 489
>gi|156337916|ref|XP_001619919.1| hypothetical protein NEMVEDRAFT_v1g149821 [Nematostella vectensis]
gi|156203982|gb|EDO27819.1| predicted protein [Nematostella vectensis]
Length = 266
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 153/234 (65%), Gaps = 12/234 (5%)
Query: 807 IKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDW 866
+KSE NKLY+ LE+DIDG++K MLLLKKKKYAA+ IS+ +G M +E+KG+D+VRRDW
Sbjct: 1 VKSEVNKLYRLLEIDIDGIFKSMLLLKKKKYAAIMISENEDGTMNEVKEMKGLDIVRRDW 60
Query: 867 SQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQL 926
LA +AG +V+SQIL QS + + N+H+ + I D+ G V L I KQL
Sbjct: 61 CDLAKDAGNYVLSQILSAQSR-----EAIVDNVHDFLITIGEDVKGGKVDLQKYVINKQL 115
Query: 927 TKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTS----EAATQRAYNI 982
TKAP +Y D+K+LPHV VAL L + S+K+ GDTI Y+IC+ Y +
Sbjct: 116 TKAPHDYPDKKSLPHVHVALWL-MSKSRKVGVGDTIPYVICDVSMHLPLVTCGALVHYLL 174
Query: 983 EELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG--LDTSLYR 1034
E + + LKID YYL+ Q+HPVV RL +PI+GTD+ RIAECLG L S YR
Sbjct: 175 HEFRKSDSLKIDTKYYLANQVHPVVARLCDPIDGTDSARIAECLGGILHPSGYR 228
>gi|159481277|ref|XP_001698708.1| DNA polymerase alpha subunit one [Chlamydomonas reinhardtii]
gi|158273602|gb|EDO99390.1| DNA polymerase alpha subunit one [Chlamydomonas reinhardtii]
Length = 1114
Score = 193 bits (490), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 205/434 (47%), Gaps = 111/434 (25%)
Query: 715 NLSSDLLMQYDI-RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV 773
+L ++ +Y+I A+KLTANSMYGCLGF SRF+AQPLA L+TA+GR IL +T L
Sbjct: 623 SLYPSIIQEYNICFTTAIKLTANSMYGCLGFGASRFYAQPLAELITAQGRSILSSTVDL- 681
Query: 774 ENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
+G +IK E NK YK LE+++DGV+K +LLLK
Sbjct: 682 -------------------------EARALGARIKREVNKRYKLLEIELDGVFKSILLLK 716
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KKKYAA+ + G++ E KG+D+VRRDW L+ + G F ++ +L + +
Sbjct: 717 KKKYAAVKLEPDGQGRLAEVMEQKGLDIVRRDWCPLSKDVGNFALAAVLSGRGR-----E 771
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ + IH H++++ + G +P+ ITKQLTK PE+Y D K PHVQVA+R
Sbjct: 772 EVVGEIHAHLRQVAERVRAGQIPMGKFIITKQLTKRPEDYPDAKNQPHVQVAMRRRAAGK 831
Query: 954 KKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
+ DG IHPVV+RL+ P
Sbjct: 832 R--------------DGV-----------------------------LPIHPVVSRLVSP 848
Query: 1014 IEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPS 1073
IEGTDA IA+CLGLD + + + E +EN ++ C T + +
Sbjct: 849 IEGTDAAHIADCLGLDPARGGTLMDE-----DEN-----------FRSCGPLLLTSPSGA 892
Query: 1074 CKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYL---------PHLINKLSQDMNK 1124
C GV VL E I PE + P L LIN++ +
Sbjct: 893 C-----------FPLRGVDDVLKEAIMPEQLLTPPDALGDPTATVSPAALINQVLLRARE 941
Query: 1125 YIVKYYEGWLKCED 1138
+ +YY+G L+ +D
Sbjct: 942 AVARYYDGVLRPDD 955
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 10/104 (9%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
++ + G + SRTL G R+ R E LLLH FH + +++PDKQ K+K A G G
Sbjct: 545 LSALSGQLWSRTLAGQRAGRIEMLLLHEFHSRKFIVPDKQSYKSKA-------APSGNGP 597
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT 665
K Y+GGLVLEPKKG YDK +I++DFNSLYPSIIQEYNICFTT
Sbjct: 598 K---YAGGLVLEPKKGLYDKIVIILDFNSLYPSIIQEYNICFTT 638
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 373 ATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP 432
A K V + LDA+E+ +PG V LFGK+ E SC V V+ + R + ++P
Sbjct: 106 AGKKRKKGVLPFYLLDAYENPDARPGEVVLFGKIEA-EGGRWQSCAVAVRGLQRTLIVVP 164
Query: 433 RSEHLKTKEPVSIAQ---VYSEFDQIATQYKILDFKSRKIE------KKYAFNLPGVPDL 483
R E + + +A V ++ + K+L S K YAF VP
Sbjct: 165 RREVFEDGDGAIVAMHAAVKADPARKPELMKMLQMWSAAGGVFLEGIKFYAFENRDVPHG 224
Query: 484 SEY-LEVRYSAKCPAL--PSD--LSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEF--P 536
++ ++VRY P L P+ SG T+ +FG S LER+IKGP W+ P
Sbjct: 225 EQWVIKVRYPGHLPVLQPPASGCFSGKTYCAIFGANQS-----TLERRIKGPGWMGICSP 279
Query: 537 EAEKFPSRISWCKYEV 552
++ ++ +WCK EV
Sbjct: 280 TRVEYGNQTTWCKVEV 295
Score = 40.0 bits (92), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 46 RAKRQKIDKTNKF---AAFQKLKDLKGQGVKHK--YEFTADENVYEEVSEKEYTERVLKR 100
R++RQ + + A ++L+ + G+K YE + VY+ V E++Y E V KR
Sbjct: 3 RSRRQPVQSSAAVKAKGALEQLRAARDGGLKRALAYEVKEEAAVYDVVDEQQYAEIVKKR 62
Query: 101 QE-DDWIDDDGGDGYVEDGREIFDDDIEDVP-----------QKKEKHDKRKKN------ 142
++ D++ DD G GY + G DD ++ P K+ KRKK
Sbjct: 63 RDAGDFVVDDDGAGYHDIGE---DDYFQERPVEDDGGDDGEDDTKQAGKKRKKGVLPFYL 119
Query: 143 -KNIQNPNAK 151
+NP+A+
Sbjct: 120 LDAYENPDAR 129
>gi|269861177|ref|XP_002650302.1| DNA polymerase alpha catalytic subunit [Enterocytozoon bieneusi H348]
gi|220066250|gb|EED43740.1| DNA polymerase alpha catalytic subunit [Enterocytozoon bieneusi H348]
Length = 498
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/378 (37%), Positives = 206/378 (54%), Gaps = 39/378 (10%)
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN 715
IQEYNICF+TI + + ++ E ++ LP I LV RR++K M
Sbjct: 1 IQEYNICFSTIDLLKIDKNN---------ELDMNLLFLPKIINNLVRRRREIKKQMINCK 51
Query: 716 LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN 775
+S+ L QY+IRQKALKLTANSMYGCLGFPN+RF+ +AA +T +GR IL +TK + E
Sbjct: 52 -NSEQLNQYNIRQKALKLTANSMYGCLGFPNNRFYNYDMAAFITEQGRNILKDTKIISEK 110
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGN----QIKSECNKLYKQLELDIDGVYKYMLL 831
LN VIYGDTDS+MI +K ++ N YK + ++++ + +LL
Sbjct: 111 LNLNVIYGDTDSIMIHTKYPGTREYYKKAKNSIEELAKAINNKYKNIVIELECAFAKLLL 170
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KKKYA L + N I EIKG+++VRRD++++++ + V+ IL+E DY
Sbjct: 171 YAKKKYAGLVFN--MNTSYI---EIKGLEIVRRDYAKISTNLQEKVLKIILNEND-IDYK 224
Query: 892 LDDRLQNIH-EHMKKIRTDLDNGF--VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D++ +NI+ E + K+ ++ N + I+ L K E Y + LPH+ + RL
Sbjct: 225 IDNK-KNINIEEIYKVCSNYYNNIETIKSENFIISVILRKNLEFYETKNPLPHINLGHRL 283
Query: 949 NNTNSKK---LKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHP 1005
SKK K GD I+YI+ G S AT Y+ E ID +Y+ QI P
Sbjct: 284 ----SKKGINYKAGDVINYIM---GKSTNATAEPYHPIEY-----CTIDYEWYIKNQILP 331
Query: 1006 VVTRLLEPIEGTDAVRIA 1023
+ RLL PI+ +IA
Sbjct: 332 PLYRLLSPIKEIYIEKIA 349
>gi|85014201|ref|XP_955596.1| DNA polymerase delta catalytic subunit [Encephalitozoon cuniculi
GB-M1]
gi|19171290|emb|CAD27015.1| DNA POLYMERASE DELTA CATALYTIC (LARGE) CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|449329935|gb|AGE96202.1| DNA polymerase delta catalytic large chain [Encephalitozoon cuniculi]
Length = 974
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 226/428 (52%), Gaps = 43/428 (10%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----RMLQDSDITTLC 680
+ GG V+EP+KGFY+K + +MDF+SLYPSI+ +N+C+TT+ R+L + T
Sbjct: 463 TFEGGFVIEPRKGFYNKPVSVMDFSSLYPSIMISHNLCYTTLLTKEQYRILGGTKTPT-G 521
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
Y + G+LP + L+ SR+++K +++ S L + RQ A KL ANS+YG
Sbjct: 522 NYFCSAERKKGLLPRILTDLLTSRKRIKEELEREK-DSALRACLNGRQLAFKLCANSLYG 580
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYE----------VIYGDTDSLMI 790
G + ++ VT GRE+++ TK L+E N+ VIYGDTDS+M+
Sbjct: 581 FTGASRGKLPCFEISQSVTGFGREMIILTKKLIEE-NFSRKNGYTHDSVVIYGDTDSVMV 639
Query: 791 SCNVNDYDSVFKIGNQIKSE-CNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGK 849
+ D + VFK+ +I +K K + L+ + VY LL+ KK+YA L S N
Sbjct: 640 DFDEQDIEKVFKMSKEISEFITSKFVKPVSLEFEKVYYPYLLINKKRYAGLLYSNPENPS 699
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
I + +G++ VRRD +L E + V+ IL +++ ++ + +K D
Sbjct: 700 KI---DTRGIETVRRDNCRLVKEVVETVLEMILYQKN---------VEKAKQFVKDAVRD 747
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN-SKKLKQGDTISYIICE 968
L G L+LL I+K LTKA ++Y ++A HVQ+A +L + S GD + Y+I
Sbjct: 748 LYLGRTDLSLLVISKSLTKAGDKYESKQA--HVQLAEKLRKRDESTAPVLGDRVPYVIVR 805
Query: 969 DGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT-------DAV 1020
AA +++ + + L+NN L ID YY+SQQI ++R+ EPI D
Sbjct: 806 KEKGAAAHEKSEDPVYVLENN--LPIDTEYYISQQISKPLSRIFEPIMDNVQELFRGDHT 863
Query: 1021 RIAECLGL 1028
RIA GL
Sbjct: 864 RIAASTGL 871
>gi|297793989|ref|XP_002864879.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
gi|297310714|gb|EFH41138.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
lyrata subsp. lyrata]
Length = 1092
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 245/487 (50%), Gaps = 70/487 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ VLP+ K+ G E G
Sbjct: 524 NYVEMARVTGV---PISFLLARGQSIKVLSQLLRKAKQKNLVLPNA-----KQSGSEQG- 574
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G VLE + GFY+K I +DF SLYPSI+ YN+C+ T ++
Sbjct: 575 ----------TYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVTPE 620
Query: 675 DITTLCEYLPEHQVDT-------------GILPSEIKKLVESRRQVKALMKQPN--LSSD 719
D+ L PEH T GILP +++L+ +R++ KA +K+ L
Sbjct: 621 DVRKL-NLPPEHVTRTPSGETFVKQSLQKGILPEILEELLTARKRAKADLKEAKDPLEKA 679
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---- 775
+L D RQ ALK++ANS+YG G N + +++ VT+ GR+++ TK LVE+
Sbjct: 680 VL---DGRQLALKISANSVYGFTGATNGQLPCLEISSSVTSYGRQMIEQTKKLVEDKFTT 736
Query: 776 -----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYM 829
N EVIYGDTDS+M+ V+D ++ +G + + + K ++L+ + VY
Sbjct: 737 LGGYEYNAEVIYGDTDSVMVQFGVSDVEAAMNLGREAAEHISGTFIKPIKLEFEKVYFPY 796
Query: 830 LLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
LL+ KK+YA L +N + + KG++ VRRD L +++IL
Sbjct: 797 LLINKKRYAGL---LWTNPQQFDKMDTKGIETVRRDNCLLVKNLVTESLNKIL------- 846
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D + E++KK +DL + L+LL ITK LTK ++Y + A H ++A R+
Sbjct: 847 --IDRDVPGAAENVKKTISDLLMNRIDLSLLVITKGLTKTGDDYEVKSA--HGELAERMR 902
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVV 1007
++ GD + Y+I + A +R+ + I L+NN + ID NYYL QI +
Sbjct: 903 KRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNN--IPIDPNYYLENQISKPL 960
Query: 1008 TRLLEPI 1014
R+ EP+
Sbjct: 961 LRIFEPV 967
>gi|426196824|gb|EKV46752.1| hypothetical protein AGABI2DRAFT_186127 [Agaricus bisporus var.
bisporus H97]
Length = 1071
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 153/488 (31%), Positives = 246/488 (50%), Gaps = 63/488 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+S + L +E+ YV+P
Sbjct: 495 NYTEMARVTGVPFNYL---LSRGQSIKVLSQLFRKANEEGYVIP---------------- 535
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQD 673
A KG+G AY G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT I M++
Sbjct: 536 ALKGEGTDGEAYEGATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLIDGNMIEK 595
Query: 674 SDITTLCEYLPEHQVD--------TGILPSEIKKLVESRRQVKA---LMKQPNLSSDLLM 722
D+ +Y+ D G+LP+ ++ L+ +R++ KA + K P + L
Sbjct: 596 LDLVKDVDYIQTPNNDFFVTSMKRKGLLPTILEDLISARKRAKADLKMEKDPFKKAVL-- 653
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-------- 774
D RQ ALK++ANS+YG G + P+++ VTA GR+++ TK VE
Sbjct: 654 --DGRQLALKISANSVYGFTGATVGKLPCLPISSSVTAYGRQMIEKTKQEVEAEFCIANG 711
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLL 832
+ VIYGDTDS+M+ ND V +G++ + K K ++L+ + VY LL+
Sbjct: 712 HQYDARVIYGDTDSVMVKFGQNDLAQVMALGSEAAEFVSAKFIKPIKLEFEKVYYPYLLI 771
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K + S KG++ VRRD +L S + + ++L +
Sbjct: 772 SKKRYAGLYWTKAEKYDKMDS---KGIETVRRDNCRLVSTVIETSLHKLL---------I 819
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ ++K++ DL V ++ L ITK L+K +Y ++A HV++A R+ +
Sbjct: 820 DRDVKAAEIYVKQMIADLLQNKVDMSQLVITKALSKT--DYAGKQA--HVELAERMKQRD 875
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ GD ++Y+I + AA +++ + + NS + ID YYL Q+ + R+
Sbjct: 876 AGSAPALGDRVAYVIIKGIKGAAAYEKSEDPLYVLENS-IPIDTKYYLENQLSKPLMRIF 934
Query: 1012 EPIEGTDA 1019
EPI G A
Sbjct: 935 EPILGEKA 942
>gi|409081586|gb|EKM81945.1| hypothetical protein AGABI1DRAFT_55049 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1089
Score = 187 bits (474), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 153/488 (31%), Positives = 246/488 (50%), Gaps = 63/488 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+S + L +E+ YV+P
Sbjct: 513 NYTEMARVTGVPFNYL---LSRGQSIKVLSQLFRKANEEGYVIP---------------- 553
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQD 673
A KG+G AY G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT I M++
Sbjct: 554 ALKGEGTDGEAYEGATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLIEGSMIEK 613
Query: 674 SDITTLCEYLPEHQVD--------TGILPSEIKKLVESRRQVKA---LMKQPNLSSDLLM 722
D+ +Y+ D G+LP+ ++ L+ +R++ KA + K P + L
Sbjct: 614 LDLVKDVDYIQTPNNDFFVTSMKRKGLLPTILEDLISARKRAKADLKMEKDPFKKAVL-- 671
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-------- 774
D RQ ALK++ANS+YG G + P+++ VTA GR+++ TK VE
Sbjct: 672 --DGRQLALKISANSVYGFTGATVGKLPCLPISSSVTAYGRQMIEKTKQEVEAEFCIANG 729
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLL 832
+ VIYGDTDS+M+ ND V +G++ + K K ++L+ + VY LL+
Sbjct: 730 HQYDARVIYGDTDSVMVKFGQNDLAQVMALGSEAAEFVSAKFIKPIKLEFEKVYYPYLLI 789
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K + S KG++ VRRD +L S + + ++L +
Sbjct: 790 SKKRYAGLYWTKAEKYDKMDS---KGIETVRRDNCRLVSTVIETSLHKLL---------I 837
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ ++K++ DL V ++ L ITK L+K +Y ++A HV++A R+ +
Sbjct: 838 DRDVKAAEIYVKQMIADLLQNKVDMSQLVITKALSKT--DYAGKQA--HVELAERMKQRD 893
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ GD ++Y+I + AA +++ + + NS + ID YYL Q+ + R+
Sbjct: 894 AGSAPALGDRVAYVIIKGIKGAAAYEKSEDPLYVLENS-IPIDTKYYLENQLSKPLMRIF 952
Query: 1012 EPIEGTDA 1019
EPI G A
Sbjct: 953 EPILGEKA 960
>gi|186532719|ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|322510022|sp|Q9LVN7.2|DPOD1_ARATH RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=Protein EMBRYO DEFECTIVE 2780
gi|76262800|gb|ABA41487.1| DNA-directed DNA polymerase delta catalytic subunit [Arabidopsis
thaliana]
gi|332010438|gb|AED97821.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1095
Score = 186 bits (472), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 244/487 (50%), Gaps = 70/487 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ VLP+ K+ G E G
Sbjct: 527 NYVEMARVTGV---PISFLLARGQSIKVLSQLLRKGKQKNLVLPNA-----KQSGSEQG- 577
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G VLE + GFY+K I +DF SLYPSI+ YN+C+ T ++
Sbjct: 578 ----------TYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVTPE 623
Query: 675 DITTLCEYLPEHQVDT-------------GILPSEIKKLVESRRQVKALMKQPN--LSSD 719
D+ L PEH T GILP +++L+ +R++ KA +K+ L
Sbjct: 624 DVRKL-NLPPEHVTKTPSGETFVKQTLQKGILPEILEELLTARKRAKADLKEAKDPLEKA 682
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---- 775
+L D RQ ALK++ANS+YG G + +++ VT+ GR+++ TK LVE+
Sbjct: 683 VL---DGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEQTKKLVEDKFTT 739
Query: 776 -----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYM 829
N EVIYGDTDS+M+ V+D ++ +G + + + K ++L+ + VY
Sbjct: 740 LGGYQYNAEVIYGDTDSVMVQFGVSDVEAAMTLGREAAEHISGTFIKPIKLEFEKVYFPY 799
Query: 830 LLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
LL+ KK+YA L +N + + KG++ VRRD L +++IL
Sbjct: 800 LLINKKRYAGL---LWTNPQQFDKMDTKGIETVRRDNCLLVKNLVTESLNKIL------- 849
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D + E++KK +DL + L+LL ITK LTK ++Y + A H ++A R+
Sbjct: 850 --IDRDVPGAAENVKKTISDLLMNRIDLSLLVITKGLTKTGDDYEVKSA--HGELAERMR 905
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVV 1007
++ GD + Y+I + A +R+ + I L+NN + ID NYYL QI +
Sbjct: 906 KRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNN--IPIDPNYYLENQISKPL 963
Query: 1008 TRLLEPI 1014
R+ EP+
Sbjct: 964 LRIFEPV 970
>gi|8777309|dbj|BAA96899.1| DNA polymerase III catalytic subunit [Arabidopsis thaliana]
Length = 1081
Score = 186 bits (471), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 244/487 (50%), Gaps = 70/487 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ VLP+ K+ G E G
Sbjct: 525 NYVEMARVTGVP---ISFLLARGQSIKVLSQLLRKGKQKNLVLPNA-----KQSGSEQG- 575
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G VLE + GFY+K I +DF SLYPSI+ YN+C+ T ++
Sbjct: 576 ----------TYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVTPE 621
Query: 675 DITTLCEYLPEHQVDT-------------GILPSEIKKLVESRRQVKALMKQPN--LSSD 719
D+ L PEH T GILP +++L+ +R++ KA +K+ L
Sbjct: 622 DVRKL-NLPPEHVTKTPSGETFVKQTLQKGILPEILEELLTARKRAKADLKEAKDPLEKA 680
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---- 775
+L D RQ ALK++ANS+YG G + +++ VT+ GR+++ TK LVE+
Sbjct: 681 VL---DGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEQTKKLVEDKFTT 737
Query: 776 -----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYM 829
N EVIYGDTDS+M+ V+D ++ +G + + + K ++L+ + VY
Sbjct: 738 LGGYQYNAEVIYGDTDSVMVQFGVSDVEAAMTLGREAAEHISGTFIKPIKLEFEKVYFPY 797
Query: 830 LLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
LL+ KK+YA L +N + + KG++ VRRD L +++IL
Sbjct: 798 LLINKKRYAGL---LWTNPQQFDKMDTKGIETVRRDNCLLVKNLVTESLNKIL------- 847
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D + E++KK +DL + L+LL ITK LTK ++Y + A H ++A R+
Sbjct: 848 --IDRDVPGAAENVKKTISDLLMNRIDLSLLVITKGLTKTGDDYEVKSA--HGELAERMR 903
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVV 1007
++ GD + Y+I + A +R+ + I L+NN + ID NYYL QI +
Sbjct: 904 KRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNN--IPIDPNYYLENQISKPL 961
Query: 1008 TRLLEPI 1014
R+ EP+
Sbjct: 962 LRIFEPV 968
>gi|334188613|ref|NP_001190611.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
gi|332010439|gb|AED97822.1| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
Length = 1112
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 244/487 (50%), Gaps = 70/487 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ VLP+ K+ G E G
Sbjct: 544 NYVEMARVTGV---PISFLLARGQSIKVLSQLLRKGKQKNLVLPNA-----KQSGSEQG- 594
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G VLE + GFY+K I +DF SLYPSI+ YN+C+ T ++
Sbjct: 595 ----------TYEGATVLEARTGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVTPE 640
Query: 675 DITTLCEYLPEHQVDT-------------GILPSEIKKLVESRRQVKALMKQPN--LSSD 719
D+ L PEH T GILP +++L+ +R++ KA +K+ L
Sbjct: 641 DVRKL-NLPPEHVTKTPSGETFVKQTLQKGILPEILEELLTARKRAKADLKEAKDPLEKA 699
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---- 775
+L D RQ ALK++ANS+YG G + +++ VT+ GR+++ TK LVE+
Sbjct: 700 VL---DGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEQTKKLVEDKFTT 756
Query: 776 -----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYM 829
N EVIYGDTDS+M+ V+D ++ +G + + + K ++L+ + VY
Sbjct: 757 LGGYQYNAEVIYGDTDSVMVQFGVSDVEAAMTLGREAAEHISGTFIKPIKLEFEKVYFPY 816
Query: 830 LLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
LL+ KK+YA L +N + + KG++ VRRD L +++IL
Sbjct: 817 LLINKKRYAGL---LWTNPQQFDKMDTKGIETVRRDNCLLVKNLVTESLNKIL------- 866
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D + E++KK +DL + L+LL ITK LTK ++Y + A H ++A R+
Sbjct: 867 --IDRDVPGAAENVKKTISDLLMNRIDLSLLVITKGLTKTGDDYEVKSA--HGELAERMR 922
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVV 1007
++ GD + Y+I + A +R+ + I L+NN + ID NYYL QI +
Sbjct: 923 KRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNN--IPIDPNYYLENQISKPL 980
Query: 1008 TRLLEPI 1014
R+ EP+
Sbjct: 981 LRIFEPV 987
>gi|81157941|dbj|BAE48221.1| DNA polymerase delta subunit [Chlorella pyrenoidosa]
Length = 1087
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/480 (30%), Positives = 245/480 (51%), Gaps = 56/480 (11%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + +L K V+P N K G + GE
Sbjct: 515 NYVEMARVTGV---PMSYLLARGQSIKVFSQILRKSRTKGLVVP------NMKRGGDAGE 565
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
AY G VLEP+ G+YD+ + +DF SLYPSI+ +N+C+TT+ + +
Sbjct: 566 G--------VAYEGATVLEPRAGYYDRPVATLDFASLYPSIMMAHNLCYTTLLPKGQEKM 617
Query: 675 DITTLCEYLPEHQV------DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+ + P + V G+LP +++L+ +R++ K M+ ++D ++ Y+
Sbjct: 618 FPSEHLTFTPNNDVFVKPSLAMGVLPEILQELLTARKRAKKDMET---ATDPFLRAVYNG 674
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLN 777
RQ ALK++ANS+YG G +++ VT+ GRE+++ T+ V+ + +
Sbjct: 675 RQLALKVSANSVYGFTGATVGALPCLEISSSVTSFGREMIMETRRRVQERYCKANGYSHD 734
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKK 836
EVIYGDTDS+M+ V+D + ++G + +E +K + K ++L+ + VY LL+ KK+
Sbjct: 735 AEVIYGDTDSVMVYFGVDDVAAAMQLGLEAAAEVSKAFIKPIKLEFEKVYNPYLLISKKR 794
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YA L +K I + KG++ VRRD L + +IL E++ +
Sbjct: 795 YAGLLWTKPEKWDKI---DTKGIETVRRDNCLLVRNVVTTCLEKILVERNPGEAC----- 846
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
E++K + +DL + L+LL I+K LT+ +EY + A HV++A ++ +
Sbjct: 847 ----EYVKGVISDLLMNKLDLSLLVISKGLTQNADEYDTKAA--HVELAKKMKKRDPATA 900
Query: 957 KQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + Y+I + A ++A + I L+NN L ID +YL + + RL EPI
Sbjct: 901 PAVGDRVPYVIVKAAKGAKAYEKAEDPIYALRNN--LPIDCQHYLEHHLEKPLMRLFEPI 958
>gi|396082048|gb|AFN83661.1| DNA polymerase catalytic subunit delta [Encephalitozoon romaleae
SJ-2008]
Length = 959
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 221/410 (53%), Gaps = 42/410 (10%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----RMLQDSDITTLC 680
++ GG V+EPK+GFY+K + +MDF+SLYPSI+ N+C+TT+ R+L T
Sbjct: 448 SFEGGFVIEPKRGFYNKPVSVMDFSSLYPSIMISNNLCYTTLLTKEQYRVLGGIKTPT-D 506
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKLTANS 737
Y + G+LP + L++SR+++K +K+ P L + L + RQ A+KL ANS
Sbjct: 507 NYFCSAETKKGLLPRILIDLLDSRKRIKEELKKEKDPALKACL----NGRQLAVKLCANS 562
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYE----------VIYGDTDS 787
+YG G R ++ VT GRE++ TK+L+E N+ VIYGDTDS
Sbjct: 563 LYGFTGASKGRLPCFEISQSVTGFGREMINFTKNLIEE-NFSKKNGYTHDSVVIYGDTDS 621
Query: 788 LMISCNVNDYDSVFKIGNQI-KSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
+MI N D VF++ +I + K K + L+ + VY LL+ KK+YA L S
Sbjct: 622 VMIDFNEEDIGKVFEMSKEISRFITTKFVKPVSLEFEKVYYPYLLINKKRYAGLLYSNPD 681
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+ I + +G++ VRRD L E + V+ IL +++ ++ +K +
Sbjct: 682 SPSKI---DTRGIETVRRDNCGLVKEVVETVLEMILYQRN---------VEKAKRFVKSV 729
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN-SKKLKQGDTISYI 965
DL G + L+LL I+K LTK ++Y ++A HV++A +L + S GD + Y+
Sbjct: 730 VGDLYLGRIDLSLLVISKSLTKTGDKYGSKQA--HVELAEKLRKRDESTAPVLGDRVPYV 787
Query: 966 ICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
I + G AA +++ + + L+NN L ID YY+ QQ+ + R+ +PI
Sbjct: 788 IVKKGKGMAAYEKSEDPVYVLENN--LPIDTEYYIEQQLSKPLKRIFDPI 835
>gi|392589878|gb|EIW79208.1| hypothetical protein CONPUDRAFT_138364 [Coniophora puteana RWD-64-598
SS2]
Length = 1096
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 250/488 (51%), Gaps = 64/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+S + L +E+ Y +P
Sbjct: 521 NYIEMARVTGVPFNYL---LSRGQSIKVLSQLYRRANEEGYAIP---------------- 561
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
A KG+G + Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 562 AFKGEGSDEQ-YEGATVIEPKKGYYDAPIATLDFSSLYPSIMMAHNLCYTTLLDKKTIDR 620
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ +++D D T ++ ++ G+LPS ++ L+ +R++ KA +K+ +D +
Sbjct: 621 LELVKDVDYIQTPNNDFFATAKMRKGLLPSILEDLIGARKRAKADLKK---ETDTFKRAV 677
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + P+++ T+ GR+++ TK VE
Sbjct: 678 LDGRQLALKISANSVYGFTGATIGKLPCLPISSSTTSYGRQMIEKTKQEVEAEFCIANGH 737
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
N EVIYGDTDS+M+ +D V +G Q K K ++L+ + VY LL+
Sbjct: 738 AHNAEVIYGDTDSVMVKFGPSDLREVMAMGAQAADFVTAKFIKPIKLEFEKVYFPYLLIS 797
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L +K + S KG++ VRRD +L S + + ++L +D
Sbjct: 798 KKRYAGLYWTKPEKYDKMDS---KGIETVRRDNCRLVSTVIETCLHKML---------ID 845
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
++ ++ KK+ +DL V ++ L ITK L KA +Y ++A HV++A R+ ++
Sbjct: 846 RDVKGAEDYTKKMISDLLLNKVDMSQLVITKALAKA--DYAAKQA--HVELAERMRQRDA 901
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y+I + AA +++ + + L+NN + ID YYL Q+ + R+
Sbjct: 902 GSAPALGDRVAYVIIKGMKGAAAYEKSEDPLFVLENN--IPIDTKYYLENQLSKPLMRIF 959
Query: 1012 EPIEGTDA 1019
EPI G A
Sbjct: 960 EPILGEKA 967
>gi|256079239|ref|XP_002575896.1| DNA polymerase alpha catalytic subunit [Schistosoma mansoni]
Length = 511
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 153/532 (28%), Positives = 247/532 (46%), Gaps = 77/532 (14%)
Query: 42 MEGGR-AKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKR 100
MEG + +R K ++ A K+++ K +G + + E ++ VYE V E EY E V KR
Sbjct: 1 MEGVKNPRRASSAKESRLALLAKMREAKEKGERLRIE-KDEQPVYETVDEAEYAELVRKR 59
Query: 101 QEDDWIDDDGGDGYVEDGREIFDDDIED------------------VPQKKE-KHDKRKK 141
EDDWI DD G Y EDGREIFDD+ ED +P+KK D R
Sbjct: 60 LEDDWIVDDEGGDYAEDGREIFDDNDEDEESYDSKPKAKSKMSSTSIPKKKRLNPDIRAS 119
Query: 142 NKNIQNPNAKGDIQKLLA---NMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNT 198
+ P I+ L A KK+KE L+ D L DLL+E L +
Sbjct: 120 DSAPLRPPVGRGIRSLFAASSGSNSSKKRKEMKDLSVDPNLDDLLAE----------LES 169
Query: 199 KTNEIVIPKEEPPAPTAKEYLANFSKPIKVEKKIEKPIKKEPSPLKDE----------IK 248
E P + K ++A+ K + + P+PLK
Sbjct: 170 SVTEPKPHHHNPDNLSRKSFVAS-----KRNSGVHGNVVNTPTPLKRRSPERPEQPIHTP 224
Query: 249 SNDSVMEVEMNVAEQSKEEPVDD------------GLWEQMQIDDWDNSQQTQDVLPEQA 296
S + ++ + S + P+D G +M+ + + ++++ A
Sbjct: 225 SGSRLRLPLVSEKKHSSQTPLDQRSRNPFSCRELTGTEPKMKHSKPQVTGEPKEIINFSA 284
Query: 297 KVELQIEAIESQSIEEKVDVTN------VESVSSAVELSTSPPPQV----VEKKEHKCAE 346
+ + E+ S+ +VD TN +E + ++ + PP ++ A
Sbjct: 285 ---ISLPTEEATSMVSEVDETNFSEDFEMEMIPKNIQPAVQPPKSTSGSNMQSTTSVTAN 341
Query: 347 WEAIQTEPSTSEPQVHSRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKV 406
W + E T+ S P +++ N + ++ DA ED + PG VYLFGK+
Sbjct: 342 WLTEENLAKADETTWIDETSPVSFPPSSNKGN--ILYFYWFDAHEDFKQLPGIVYLFGKL 399
Query: 407 F-VKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFK 465
+ ++ +++SCC+ +++++R+I+LLPR+ + + ++ VY EF + +QYKI F+
Sbjct: 400 YDHSKSGTYASCCLRIKDLERRIFLLPRTSSPENGDIPTVKDVYMEFRDLTSQYKIGKFR 459
Query: 466 SRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSF 517
+ EK+YAF VP+ S+YLEVRY+A ALP+DL G TFSH+FGT +S
Sbjct: 460 CKTTEKRYAFEYADVPETSDYLEVRYAASYSALPADLQGKTFSHIFGTNTSL 511
>gi|150401083|ref|YP_001324849.1| DNA polymerase Pol2 [Methanococcus aeolicus Nankai-3]
gi|150013786|gb|ABR56237.1| DNA polymerase Pol2 [Methanococcus aeolicus Nankai-3]
Length = 811
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 241/484 (49%), Gaps = 70/484 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I +N+ G L S E+LLL K+Y+ P++ YG N+ +
Sbjct: 349 IMFSNIVGQCLFDISRMSSSNMVEYLLLKHSFNKNYLAPNRPYG------------NEYQ 396
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R K Y GG V EP KG +D I+ MDF +LYPSII YNI TI D++ L
Sbjct: 397 NRLKEGYEGGYVKEPIKGMHDN-IVSMDFRALYPSIIISYNISPDTINCPCCGDTNDKIL 455
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL-------------LMQYDI 726
+ + ++ GI+P +K L+E R+ +K ++K N + + L+ Y+
Sbjct: 456 GYWFCKKKI--GIIPEILKDLIERRKNIKDVLKNKNTTENNKDDNNKNNNENYKLLNYE- 512
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
Q+++K+ ANS YG + +P +R++++ A ++T GR + T EN + VIY DTD
Sbjct: 513 -QQSIKILANSFYGYMAYPRARWYSKECAEVITHLGRAYIRKTIEEAENNGFNVIYADTD 571
Query: 787 SLMISCNVND---------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKY 837
L + N + K N+I E L +++EL+ +G YK + + KK+Y
Sbjct: 572 GLYAILDENKNKNTNKENILNKTIKFLNEINRE---LPEKMELEFEGYYKRGIFITKKRY 628
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDE-------QSYTDY 890
A + N K+I +KG++ VRRDWS +A + K V++ +L E Q D
Sbjct: 629 ALID----ENNKII----VKGLEFVRRDWSNIAKKTQKKVLNTLLKEGDVETAKQIIKD- 679
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+++D L+N+ + D P L+ I KQLTK EY+ A PH+ VA ++ +
Sbjct: 680 TIND-LKNLPQSKIGESPGGDKKINPKDLI-IYKQLTKDISEYS--TATPHIAVAKKMRD 735
Query: 951 TNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+LK GD I ++I +G+S ++RA E+ N D NYY+ Q+ P V R+
Sbjct: 736 RGD-RLKIGDVIGFVIV-NGSS-PISERATIPEQATN-----YDANYYIDNQVLPPVLRI 787
Query: 1011 LEPI 1014
+E I
Sbjct: 788 MEAI 791
>gi|345483424|ref|XP_001602680.2| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1090
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 241/486 (49%), Gaps = 65/486 (13%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V LS L G+ + LL E+ Y++P +
Sbjct: 519 MEMARVTGVS---LSSLLTRGQQIKVVSQLLRKTIERGYLIP----------------VH 559
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ---- 672
+G+G + + G V+EPK+G+Y+ I +DF+SLYPSII +NIC+TT+ Q
Sbjct: 560 QGQGSDEQ-FEGATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNICYTTLLSPAAQKAYE 618
Query: 673 ----DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
D T + + V GILP ++ L+ +R+ KA +K+ +D L Q D
Sbjct: 619 VPENDVTKTPVNSNFVKSNVRKGILPEILESLLSARKVAKAELKK---ETDPLKQKVLDG 675
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE +
Sbjct: 676 RQYALKVSANSVYGFTGAQQGKLPCLEISGSVTAYGRTMIDKTKHEVEQQYRKENGYEHD 735
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
EVIYGDTDS+M+ V + K+G + +K K ++L+ + VY LL+ KK+
Sbjct: 736 AEVIYGDTDSVMVKFGVKSIEDAMKLGKEAAEYVTSKFIKPIKLEFEKVYFPYLLINKKR 795
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ KM C KG++ VRRD L + + ++L +D
Sbjct: 796 YAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL---------IDRN 842
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
++ ++ K++ +DL + ++ L ITK+LTK +YT ++A HV++A ++ ++
Sbjct: 843 PEDAIDYAKQVISDLLCNRIDISQLVITKELTKT--DYTAKQA--HVELAAKMKKRDAGT 898
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD I Y+ A Q+A + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 899 APKLGDRIPYVFISGPKGTPAYQKAEDPIYVLENN--IPIDTNYYLENQLSKPLVRIFEP 956
Query: 1014 IEGTDA 1019
I G A
Sbjct: 957 ILGDKA 962
>gi|410720|gb|AAB28217.1| DNA polymerase alpha, DNAPol alpha [Plasmodium falciparum, K1,
Peptide, 1855 aa]
Length = 1855
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 217/388 (55%), Gaps = 46/388 (11%)
Query: 691 GILPSEIKKLVESRRQVKALM--KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSR 748
GILP +K LVE R +K L+ ++ +LL+ I+ ++KL +NS+YGCLG N+R
Sbjct: 1150 GILPCILKSLVEKRSVIKKLISNEKNKEKKELLL---IQSLSIKLISNSIYGCLGNTNNR 1206
Query: 749 FFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMI-----SCNVNDYDSVFK 802
F+A+ LA+ +T+KGR +L +TK VE N +VIYGDTDS+MI + N+N+Y FK
Sbjct: 1207 FYAKHLASYITSKGRNLLQHTKFKVEKEFNLKVIYGDTDSIMIDTGIKANNINNYKESFK 1266
Query: 803 IGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVV 862
+ + IK+ NK YK+LELD++ ++ +LLLKKKKYA + + N E+KG++ +
Sbjct: 1267 LAHLIKNSINKNYKKLELDLECIFSKLLLLKKKKYACAKV--IDNNLEKYEYEMKGINFI 1324
Query: 863 RRDWSQLASEAGKFVISQILDEQSYTDYSL-----DDRLQNIHEHMKKIRTDLDNGFVPL 917
+RD+S+++ G V+ I + ++ +D + IHE+++ I + N L
Sbjct: 1325 KRDFSKISKLIGNEVLRIIFTNRDVDSKNIPVPLENDLSEQIHEYLRTINQRIQNDEFDL 1384
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQG------DTISYIIC--ED 969
ITK+LTK EY D+ +L HV VA R+ +K G I Y +C ED
Sbjct: 1385 DYYIITKKLTKNVHEYQDKNSLGHVLVAERM-------IKDGYNICVNKEIQYCVCTSED 1437
Query: 970 G------TSEAA--TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
TSE +Q ++I E+K LKID YY+ QI + RL + IEGT A +
Sbjct: 1438 ASRFYKKTSEKLNNSQCCFSINEIK-KYNLKIDKEYYIRNQILSPINRLCQYIEGTSAEK 1496
Query: 1022 IAECLGLDTSLYRSQIKESIQQSEENIL 1049
++ C +Y + ++ +Q EEN L
Sbjct: 1497 LSSCFN----IYDVKEIKTDKQIEENYL 1520
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
Query: 557 MEKIR-ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEA 615
+EK R +T + G + R+L+ SER EF LLH +++K ++ P K+ + E
Sbjct: 962 IEKTRDLTKLSGYIWMRSLLCYTSERVEFFLLHEYNKKKFITPLI------KKRTKKIET 1015
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
N+ K + A Y GGLVL+P G+YD F++ +DFNSLYPSII EYN+CF+T+ ++
Sbjct: 1016 NQMKNKNTAKYLGGLVLDPLCGYYDTFVLYLDFNSLYPSIIIEYNVCFSTLKLK 1069
Score = 47.0 bits (110), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 392 DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLL--------PRSEHLKTKEPV 443
DI K ++ LFGK K + S + ++N+DR Y L E +K
Sbjct: 341 DICKHRNSIILFGKTLTKFK-KYKSISIFIENLDRYYYFLLNKNKVYYENGEEIKFNHEK 399
Query: 444 SIAQVYSEFDQ---IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
+ SEF + I +Y + KI K+ NL D Y++V YS +
Sbjct: 400 FKIHIMSEFLEEFKIIREYHNIKMAKYKIVKRKNLNLSSYDD-ELYIKVLYSYNNDPIHE 458
Query: 501 DLS-GDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP-SRISWCKYE 551
G ++ + +EN ++++ K P W++ K S +++C ++
Sbjct: 459 KFQKGSSYLSFYCCNEDIVENFIIKKNFKLPCWIKIKNLRKNDLSNLTYCYFD 511
>gi|303390605|ref|XP_003073533.1| DNA polymerase catalytic subunit delta [Encephalitozoon intestinalis
ATCC 50506]
gi|303302680|gb|ADM12173.1| DNA polymerase catalytic subunit delta [Encephalitozoon intestinalis
ATCC 50506]
Length = 959
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 235/438 (53%), Gaps = 54/438 (12%)
Query: 602 YGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNI 661
Y KEG E + + KK Y GG V+EPKKGFY K I +MDF SLYPSI+ +N+
Sbjct: 427 YRTASKEGFVVPETDPFESGKK--YEGGFVIEPKKGFYGKPISVMDFTSLYPSIMISHNL 484
Query: 662 CFTTIPV----RMLQDSDITT---LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ- 713
C+TT+ R+L T C PE + G+LP + L++SR+++K +K+
Sbjct: 485 CYTTLLTKDQYRILGGIRTPTDNYFCS--PERK--KGLLPRILVDLLDSRKKIKEELKKE 540
Query: 714 --PNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
P + + L + +Q A+KL ANS+YG G + ++ VT GRE+++ TK
Sbjct: 541 KDPAVKACL----NGKQLAVKLCANSLYGFTGASKGKLPCFEISQSVTGFGREMIMLTKK 596
Query: 772 LVENLNYE----------VIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLEL 820
L+E N+ VIYGDTDS+MI+ + D VF++ +I +K K + L
Sbjct: 597 LIEE-NFSKKNGYTHDSVVIYGDTDSVMINFDEEDIKKVFEMSKEISEFVTSKFMKPVSL 655
Query: 821 DIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQ 880
+ + VY LL+ KK+YA L S + I + KG++ VRRD L E + V+
Sbjct: 656 EFEKVYYPYLLINKKRYAGLLYSNPNTASKI---DTKGIEAVRRDNCGLVKETVETVLEM 712
Query: 881 ILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALP 940
IL E++ ++ + ++ + DL G + L+LL I+K LTK+ E+Y R+A
Sbjct: 713 ILHEKN---------VEKAKQFVRDVVRDLYLGRIDLSLLVISKSLTKSGEKYGSRQA-- 761
Query: 941 HVQVALRL---NNTNSKKLKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVN 996
HV++A +L + T + L GD + Y+I + G AA +++ + + L+NN L ID
Sbjct: 762 HVELAEKLRKRDETTAPVL--GDRVPYVIVKKGKGIAAYEKSEDPVYVLENN--LPIDTE 817
Query: 997 YYLSQQIHPVVTRLLEPI 1014
YY+ QQ+ + R+ EP+
Sbjct: 818 YYIEQQLSKPMERIFEPV 835
>gi|332028725|gb|EGI68756.1| DNA polymerase delta catalytic subunit [Acromyrmex echinatior]
Length = 1010
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 243/489 (49%), Gaps = 71/489 (14%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V +S L G+ + LL EK Y++P Q G T E
Sbjct: 439 MEMARVTGVS---ISSLLTRGQQIKVVSQLLRKTREKDYLMPVHQ-------GHGTDEQ- 487
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM------ 670
+ G V+EPK+G+Y+ I +DF+SLYPSII +N+C+TT+
Sbjct: 488 ---------FEGATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLTIAKKKELN 538
Query: 671 LQDSDITTLC--EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+Q+ ITT ++ V GILP ++ L+ +R++ K +KQ +D L Q D
Sbjct: 539 IQEDQITTTPSKSLFIKNSVRKGILPEILENLLVARKKAKTELKQ---ETDPLKQKVLDG 595
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VE+ +
Sbjct: 596 RQYALKVSANSVYGFTGAQMGKLPCLEISASVTAYGRTMIEQTKQEVEDHFRIENGYKND 655
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+M+ V D + K+G + +K K ++L+ + VY LL+ KK+
Sbjct: 656 AMVIYGDTDSVMVKFGVKDIEDAMKLGKEAADYVTSKFIKPIKLEFEKVYFPYLLINKKR 715
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ---SYTDYSL 892
YA L +K KM C KG++ VRRD L + + +L E+ + DY+
Sbjct: 716 YAGLYFTKPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQILLIERNPHAAVDYA- 770
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
K++ +DL + L+ L ITK+LTK +Y ++A HV++A ++ +
Sbjct: 771 -----------KQVISDLLCNRIDLSQLVITKELTKT--DYAAKQA--HVELATKMKKRD 815
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ K GD ++Y+ A Q+A + + L+N+ + ID NYYL Q+ + R+
Sbjct: 816 AGNAPKLGDRVAYVFISAAKGTPAYQKAEDPVYALQNS--IPIDTNYYLENQLAKPLVRI 873
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 874 FEPILGDKA 882
>gi|124505377|ref|XP_001351430.1| DNA polymerase alpha [Plasmodium falciparum 3D7]
gi|8248757|emb|CAB62892.2| DNA polymerase alpha [Plasmodium falciparum 3D7]
Length = 1912
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 215/390 (55%), Gaps = 50/390 (12%)
Query: 691 GILPSEIKKLVESRRQVKALM--KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSR 748
GILP +K LVE R +K L+ ++ +LL+ I+ ++KL +NS+YGCLG N+R
Sbjct: 1207 GILPCILKSLVEKRSVIKKLISNEKNKEKKELLL---IQSLSIKLISNSIYGCLGNTNNR 1263
Query: 749 FFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMI-----SCNVNDYDSVFK 802
F+A+ +A+ +T+KGR +L +TK VE N +VIYGDTDS+MI + N+N+Y FK
Sbjct: 1264 FYAKHIASYITSKGRNLLQHTKFKVEKEFNLKVIYGDTDSIMIDTGIKANNINNYKESFK 1323
Query: 803 IGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVV 862
+ + IK+ NK YK+LELD++ ++ +LLLKKKKYA + + N E+KG++ +
Sbjct: 1324 LAHLIKNSINKNYKKLELDLECIFSKLLLLKKKKYACAKV--IDNNLEKYEYEMKGINFI 1381
Query: 863 RRDWSQLASEAGKFVISQILDEQSYTDYSL-----DDRLQNIHEHMKKIRTDLDNGFVPL 917
+RD+S+++ G V+ I + ++ +D + IHE+++ I + N L
Sbjct: 1382 KRDFSKISKLIGNEVLRIIFTNRDVDSKNIPVPLENDLSEQIHEYLRTINQRIQNDEFDL 1441
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQG------DTISYIICEDGT 971
ITK+LTK EY D+ +L HV VA R+ +K G I Y +C T
Sbjct: 1442 DYYIITKKLTKNVHEYQDKNSLGHVLVAERM-------IKDGYNICVNKEIQYCVC---T 1491
Query: 972 SEAATQRAYNIEELKNNSK------------LKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
SE A++ E NNS+ LKID YY+ QI + RL + IEGT A
Sbjct: 1492 SEDASRFYKKTSEKLNNSQCCFSINEIKKYNLKIDKEYYIRNQILSPINRLCQYIEGTSA 1551
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENIL 1049
+++ C +Y + ++ +Q EEN L
Sbjct: 1552 EKLSSCFN----IYDVKEIKTDKQIEENYL 1577
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
Query: 557 MEKIR-ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEA 615
+EK R +T + G + R+L+ SER EF LLH +++K ++ P K+ + E
Sbjct: 1019 IEKTRDLTKLSGYIWMRSLLCYTSERVEFFLLHEYNKKKFITPLI------KKRTKKIET 1072
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
N+ K + A Y GGLVL+P G+YD F++ +DFNSLYPSII EYN+CF+T+ ++
Sbjct: 1073 NQMKNKNTAKYLGGLVLDPLCGYYDTFVLYLDFNSLYPSIIIEYNVCFSTLKLK 1126
Score = 47.4 bits (111), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 392 DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLL--------PRSEHLKTKEPV 443
DI K ++ LFGK K + S + ++N+DR Y L E +K
Sbjct: 400 DICKHRNSIILFGKTLTKFK-KYKSISIFIENLDRYYYFLLNKNKVYYENGEEIKFNHEK 458
Query: 444 SIAQVYSEFDQ---IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
+ SEF + I +Y + KI K+ NL D Y++V YS +
Sbjct: 459 FKIHIMSEFLEEFKIIREYHNIKMAKYKIVKRKNLNLSSYDD-ELYIKVLYSYNNDPIHE 517
Query: 501 DLS-GDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP-SRISWCKYE 551
G ++ + +EN ++++ K P W++ K S +++C ++
Sbjct: 518 KFQKGSSYLSFYCCNEDIVENFIIKKNFKLPCWIKIKNLRKNDLSNLTYCYFD 570
>gi|2865234|gb|AAC38860.1| DNA polymerase alpha, partial [Holosticha sp.]
Length = 966
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 146/233 (62%), Gaps = 27/233 (11%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYG--KNKKEG------EET 612
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ K+ + G E
Sbjct: 735 QLTNIAGNLWFRSLQNARAERNEILLLHEFKKKKFILPDKKMPNPKDMRRGMADEFEEPE 794
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PVR 669
KG RKKAAY+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ P +
Sbjct: 795 VAGKKGGKRKKAAYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRRPTK 854
Query: 670 MLQDSDITTLCEY------------LPEHQVDT--GILPSEIKKLVESRRQVKALMKQPN 715
SDI LP+ V+ +LP+ ++ LV+ R+ VK MK
Sbjct: 855 NFDGSDIKNKFNVDSADGEDVEESPLPDKSVNLKDAVLPNVLRDLVQKRKAVKDKMKNEK 914
Query: 716 LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFA-QPLAALVTAKGREILL 767
+ L Q +IRQKA+KLTANSMYGCLGF +SRF+A + +AAL+T GR LL
Sbjct: 915 -DAVKLQQLEIRQKAIKLTANSMYGCLGFSSSRFYAFRRIAALITRTGRSTLL 966
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 238/512 (46%), Gaps = 77/512 (15%)
Query: 105 WIDDDGGDGYVEDGREIFD--DDIEDVPQKKEKHDKRKKNKNIQNPNAKGDIQKLLANMP 162
+I DD G GY ++G EI++ D ED +KK++ K PN + ++
Sbjct: 1 FIVDDDGYGYRDNGGEIWEVSDLKEDGGKKKKRKLDVKNTLQFFQPNEQSITNFMMPTTT 60
Query: 163 VKKKK--------KEEVQLNND---DVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPP 211
+KK K K +V++ ++ +++ DLL E++ L+
Sbjct: 61 IKKNKGPAASVMNKPKVKMTDEQSKNIMDDLLQELDNNDGDDLQ---------------- 104
Query: 212 APTAKEYLANFSKPIKVEKKIEKPIK-------KEPSPLKDEIKSNDSVMEVEMNVAEQS 264
A+ L +KPI K+ E K K+ ++++++ + V +V+ NV S
Sbjct: 105 DINAQAVLEELNKPIAFNKEDEMMNKYRVTLQTKQEIQIREQMEDHMPVGQVQQNVNSFS 164
Query: 265 KEEPVDD---GLWEQMQIDDWDNSQQTQDVLPE--------QAKVELQIEAIESQ----S 309
K+ +DD + ++ + ++Q+ + P ++ ++ +E ++ S
Sbjct: 165 KKRKLDDISSTPADAKRMSESASAQKIPIIAPSVNTSYFDARSNLDHSMEYHSAKEGDVS 224
Query: 310 IEEKVDVTNVESVSSAVELSTSPPPQVVEKKEHKCAEWEAIQT-------EPSTSEPQVH 362
++EK T + V +S PP+ + +W +I+ E T +P +
Sbjct: 225 MQEKPRFTANQHVCVIALISNPIPPKNTNATP-QSDDWRSIKQQNQQANQELRTMDPNIA 283
Query: 363 SRTADDSLPLATDHENKKVFRMFFLDAFEDIYKQPGT-VYLFGKVFVKENNSHSSCCVIV 421
T + LPL D +++DA E+ GT +++FGKVF KE N + SC + +
Sbjct: 284 QNTQEYELPLNADGS----LSFYWIDAHEE---NNGTELFVFGKVFQKEINQYVSCSMKI 336
Query: 422 QNIDRKIYLLPRSEHLKTKEPVS-------IAQVYSEFDQIATQY--KILDFKSRKIEKK 472
I+R++Y LP+ ++ K + ++ I V E D I + +I ++ + + +K
Sbjct: 337 NGIEREVYALPKMQNSKARGTLTKEEETQLIRGVQLELDDIRKKRMPQITKWRCKPVTRK 396
Query: 473 YAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSW 532
YAF LP ++L+++Y A P +P++L+G+TF +FGT S LE +L+RKIKGP W
Sbjct: 397 YAFELPIQHGEHQFLKIKYDAIMPPMPNNLTGNTFECLFGTNQSMLELFILKRKIKGPCW 456
Query: 533 LEFPEAEKFPS-RISWCKYEVQCNQMEKIRIT 563
+ +K + +WC+ E N + +T
Sbjct: 457 MTIKNPQKVHEFKKTWCRQEFVINNPKDAEVT 488
>gi|224083478|ref|XP_002307042.1| predicted protein [Populus trichocarpa]
gi|222856491|gb|EEE94038.1| predicted protein [Populus trichocarpa]
Length = 1081
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 244/481 (50%), Gaps = 58/481 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V LS L G+S + LL EK+ V+P+ K+ G E G+
Sbjct: 511 NYVEMARVTGV---PLSFLLARGQSIKVLSQLLRKAKEKNLVIPNV-----KQAGSEQGK 562
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRM 670
Y G VLEPK GFY+K I +DF SLYPSI+ YN+C+ T+ VR
Sbjct: 563 -----------YEGATVLEPKAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRK 611
Query: 671 L----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
L + + T E + + GILP +++L+ +R++ KA +K+ + + D
Sbjct: 612 LNLPPECINKTPSGETFVKSNLQKGILPEILEELLTARKRAKADLKEAKDPFEKAV-LDG 670
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LN 777
RQ ALK++ANS+YG G ++ +++ VT+ GR+++ +TK LVE+ N
Sbjct: 671 RQLALKISANSVYGFTGATVAQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTILGGYEHN 730
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC--NKLYKQLELDIDGVYKYMLLLKKK 835
EVIYGDTDS+M+ V ++ K+G + +EC K ++L+ + VY LL+ KK
Sbjct: 731 AEVIYGDTDSVMVQFGVPTVEAAMKLGRE-AAECISGTFIKPIKLEFEKVYYPYLLISKK 789
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
+YA L +N + KG++ VRRD L + +IL +D
Sbjct: 790 RYAGLF---WTNPDKFDKMDTKGIETVRRDNCLLVKNLVTECLHKIL---------IDRD 837
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
+ + +K +DL + L+LL ITK LTK ++Y + A HV++A R+ ++
Sbjct: 838 VPGAVQFVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAAT 895
Query: 956 LKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
GD + Y+I + A +++ + I L+NN + ID YYL QI + R+ EP
Sbjct: 896 APNVGDRVPYVIIKGAKGAKAFEKSEDPIYVLENN--IPIDPQYYLENQISKPLLRIFEP 953
Query: 1014 I 1014
I
Sbjct: 954 I 954
>gi|13177606|gb|AAK14825.1| DNA polymerase alpha [Plasmodium falciparum]
Length = 1855
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 217/388 (55%), Gaps = 46/388 (11%)
Query: 691 GILPSEIKKLVESRRQVKALM--KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSR 748
GILP +K LVE R +K L+ ++ +LL+ I+ ++KL +NS+YGCLG N+R
Sbjct: 1150 GILPCILKSLVEKRSVIKKLISNEKNKEKKELLL---IQSLSIKLISNSIYGCLGNTNNR 1206
Query: 749 FFAQPLAALVTAKGREILLNTKSLVEN-LNYEVIYGDTDSLMI-----SCNVNDYDSVFK 802
F+A+ +A+ +T+KGR +L +TK VE N +VIYGDTDS+MI + N+N+Y FK
Sbjct: 1207 FYAKHIASYITSKGRNLLQHTKFKVEKEFNLKVIYGDTDSIMIDTGIKANNINNYKESFK 1266
Query: 803 IGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVV 862
+ + IK+ NK YK+LELD++ ++ +LLLKKKKYA + + N E+KG++ +
Sbjct: 1267 LAHLIKNSINKNYKKLELDLECIFSKLLLLKKKKYACAKV--IDNNLEKYEYEMKGINFI 1324
Query: 863 RRDWSQLASEAGKFVISQILDEQSYTDYSL-----DDRLQNIHEHMKKIRTDLDNGFVPL 917
+RD+S+++ G V+ I + ++ +D + IHE+++ I + N L
Sbjct: 1325 KRDFSKISKLIGNEVLRIIFTNRDVDSKNIPVPLENDLSEQIHEYLRTINQRIQNDEFDL 1384
Query: 918 TLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQG------DTISYIIC--ED 969
ITK+LTK EY D+ +L HV VA R+ +K G I Y +C ED
Sbjct: 1385 DYYIITKKLTKNVHEYQDKNSLGHVLVAERM-------IKDGYNICVNKEIQYCVCTSED 1437
Query: 970 G------TSEAA--TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
TSE +Q ++I E+K LKID YY+ QI + RL + IEGT A +
Sbjct: 1438 ASRFYKKTSEKLNNSQCCFSINEIK-KYNLKIDKEYYIRNQILSPINRLCQYIEGTSAEK 1496
Query: 1022 IAECLGLDTSLYRSQIKESIQQSEENIL 1049
++ C +Y + ++ +Q EEN L
Sbjct: 1497 LSSCFN----IYDVKEIKTDKQIEENYL 1520
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
Query: 557 MEKIR-ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEA 615
+EK R +T + G + R+L+ SER EF LLH +++K ++ P K+ + E
Sbjct: 962 IEKTRDLTKLSGYIWMRSLLCYTSERVEFFLLHEYNKKKFITPLI------KKRTKKIET 1015
Query: 616 NKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
N+ K + A Y GGLVL+P G+YD F++ +DFNSLYPSII EYN+CF+T+ ++
Sbjct: 1016 NQMKNKNTAKYLGGLVLDPLCGYYDTFVLYLDFNSLYPSIIIEYNVCFSTLKLK 1069
Score = 47.0 bits (110), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 392 DIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLL--------PRSEHLKTKEPV 443
DI K ++ LFGK K + S + ++N+DR Y L E +K
Sbjct: 341 DICKHRNSIILFGKTLTKFK-KYKSISIFIENLDRYYYFLLNKNKVYYENGEEIKFNHEK 399
Query: 444 SIAQVYSEFDQ---IATQYKILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPS 500
+ SEF + I +Y + KI K+ NL D Y++V YS +
Sbjct: 400 FKIHIMSEFLEEFKIIREYHNIKMAKYKIVKRKNLNLSSYDD-ELYIKVLYSYNNDPIHE 458
Query: 501 DLS-GDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKFP-SRISWCKYE 551
G ++ + +EN ++++ K P W++ K S +++C ++
Sbjct: 459 KFQKGSSYLSFYCCNEDIVENFIIKKNFKLPCWIKIKNLRKNDLSNLTYCYFD 511
>gi|296109913|ref|YP_003616862.1| DNA polymerase Pol2 [methanocaldococcus infernus ME]
gi|295434727|gb|ADG13898.1| DNA polymerase Pol2 [Methanocaldococcus infernus ME]
Length = 757
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 234/456 (51%), Gaps = 46/456 (10%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+ + + VL S+ E+LL+ ++ +Y++P NK EE K
Sbjct: 328 VMFSRIINQVLFEVTRMSSSQMVEYLLMKRAYKLNYIVP------NKPSEEEY------K 375
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R +Y GG V EP KG ++ I+ +DF SLYPSII YNI T+ ++ L
Sbjct: 376 RRVAESYEGGYVKEPIKGIHEN-IVYLDFKSLYPSIIISYNISPDTLDCPCCKEESEKIL 434
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+ + ++ G++P +K LV R ++K +K+ D L+ Y+ Q++LK+ ANS+Y
Sbjct: 435 GHWFCKRRI--GLIPMTVKDLVRRRVEIKERLKK---EKDKLLNYE--QQSLKILANSVY 487
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
G L +P +RF+ + A ++T GR+ ++ T E + V+Y DTD + ++ + ++
Sbjct: 488 GYLAYPRARFYNKVCAEIITFLGRKYIMETIKEAEVFGFTVLYADTDGIFLTIKGENKEA 547
Query: 800 VFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKG 858
+ K + N KL + +EL+ +G Y + + KKKYA ++ G++I IKG
Sbjct: 548 ILKKAYNFLNHINSKLPEDMELEFEGFYSRGIFITKKKYALIT----EEGEII----IKG 599
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
++ VRRDWS +A K V+ +L E ++ + +K+ L N V
Sbjct: 600 LEYVRRDWSGIAKRTQKEVLEALLKEGD---------IEKAKKIIKETIKKLRNLEVDKE 650
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQR 978
L I Q+TK EY + PHV++A RL KK+K GD + YII + ++ ++R
Sbjct: 651 ELIIYTQITKDLNEY--KSTAPHVELAKRLVR-EGKKIKPGDVLGYIIVK--GAKQVSER 705
Query: 979 AYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
A EE+ + +ID+NYY+ QI P + R++E +
Sbjct: 706 AKLPEEVSLD---EIDINYYIDNQILPPIIRIMESL 738
>gi|322801992|gb|EFZ22529.1| hypothetical protein SINV_03834 [Solenopsis invicta]
Length = 1072
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 241/489 (49%), Gaps = 71/489 (14%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V +S L G+ + LL EK Y++P Q G T E
Sbjct: 501 MEMARVTGVS---ISSLLTRGQQIKVVSQLLRKTKEKDYLMPVHQ-------GHGTDEQ- 549
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM------ 670
+ G V+EPK+G+Y+ I +DF+SLYPSII +N+C+TT+
Sbjct: 550 ---------FEGATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLTVAKKKELN 600
Query: 671 LQDSDITTLC--EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+Q+ ITT + + GILP ++ L+ +R++ KA +KQ +D L Q D
Sbjct: 601 IQEDQITTTPSNSLFIKSTIRKGILPEILENLLSARKKAKAELKQ---ETDPLKQKVLDG 657
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VEN +
Sbjct: 658 RQYALKVSANSVYGFTGAQMGKLPCLEISASVTAYGRTMIERTKQEVENHFRIENGYKND 717
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+M+ V + +G + +K K ++L+ + VY LL+ KK+
Sbjct: 718 AMVIYGDTDSVMVKFGVKAIEDAMVLGKEAADYVTSKFIKPIKLEFEKVYFPYLLINKKR 777
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ---SYTDYSL 892
YA L +K KM C KG++ VRRD L + + +L E+ S DY+
Sbjct: 778 YAGLYFTKPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQILLIERNPHSAIDYA- 832
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
K++ +DL + L+ L ITK+LTK +Y ++A HV++A ++ +
Sbjct: 833 -----------KQVISDLLCNRIDLSQLVITKELTKT--DYAAKQA--HVELAAKMKKRD 877
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ K GD ++Y+ A Q+A + + L+N+ + ID NYYL Q+ + R+
Sbjct: 878 AGNAPKLGDRVAYVFTSAAKGTPAYQKAEDPVYALQNS--IPIDTNYYLENQLAKPLVRI 935
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 936 FEPILGEKA 944
>gi|336380987|gb|EGO22139.1| hypothetical protein SERLADRAFT_451027 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1062
Score = 179 bits (454), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 250/489 (51%), Gaps = 65/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+S + L +E+ YV+P G+ E
Sbjct: 486 NYIEMSRVTGVPFNFL---LSRGQSIKVLSQLFRKANEEGYVVPALLKGEGTDE------ 536
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 537 ----------QYEGATVIEPKKGYYDSPIATLDFSSLYPSIMMAHNLCYTTLLDKTTIDR 586
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLM 722
+++++D D T ++ G+LP+ ++ L+ +R++ KA +K+ P + L
Sbjct: 587 LQLVKDVDYIQTPNNDFFATTSRRKGLLPTVLEDLISARKRAKADLKKETDPFKCAVL-- 644
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-------- 774
D RQ ALK++ANS+YG G + +++ VT+ GR+++ TK VE
Sbjct: 645 --DGRQLALKISANSVYGFTGATIGKLPCLAISSSVTSYGRQMIEKTKQEVEAEYCVANG 702
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLL 832
+ N EVIYGDTDS+M+ + V +G++ + K ++L+ + VY LL+
Sbjct: 703 HDHNAEVIYGDTDSVMVKFGPAELTKVMALGSEAADLVTARFVKPIKLEFEKVYFPYLLI 762
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K + S KG++ VRRD +L S + + ++L +
Sbjct: 763 SKKRYAGLYWTKPEKYDKMDS---KGIETVRRDNCRLVSTVIETCLHKML---------I 810
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ ++ K++ +DL V ++ L ITK L+KA EY+ ++A HV++A R+ +
Sbjct: 811 DRDVKGAEDYTKRVISDLLQNKVDMSQLVITKALSKA--EYSGKQA--HVELAGRMKQRD 866
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y+I + AA +++ + + L+NN + ID YYL Q+ + R+
Sbjct: 867 AGSAPALGDRVAYVIVKGMKGAAAYEKSEDPLYVLENN--IPIDTKYYLDNQLSKPLMRI 924
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 925 FEPILGEKA 933
>gi|393222031|gb|EJD07515.1| hypothetical protein FOMMEDRAFT_164466 [Fomitiporia mediterranea
MF3/22]
Length = 1062
Score = 179 bits (454), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 251/489 (51%), Gaps = 66/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V + L L G+S + LL +++ Y+ P + G ++
Sbjct: 487 NYIEMARVTGVPFHFL---LQRGQSIKVLSQLLRRANDEGYITPTLKGGGTDEQ------ 537
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+ + D
Sbjct: 538 -----------YEGATVIEPKKGYYDAPIATLDFSSLYPSIMMAHNLCYTTLLDKHTIDR 586
Query: 675 -DITTLCEYLPEHQVD--------TGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLM 722
++ +Y+ D G+LPS ++ L+ +R++ KA +K+ P + L
Sbjct: 587 LNLVKGVDYIQTPNNDFFVTKEKRKGLLPSVLEDLIAARKRAKADLKKETDPFRRAVL-- 644
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-------- 774
D RQ ALK++ANS+YG G + P+++ VTA GR+++ TK VE
Sbjct: 645 --DGRQLALKISANSVYGFTGATIGKLPCLPISSSVTAYGRQMIEKTKQEVEAEYCIANG 702
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLL 832
N EVIYGDTDS+M+ +D +V ++G++ K K ++L+ + VY LL+
Sbjct: 703 REHNAEVIYGDTDSVMVKFGPSDLATVMQMGSEAADLVTAKFIKPIKLEFEKVYFPYLLI 762
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K + S KG++ VRRD +L S + + ++L +
Sbjct: 763 NKKRYAGLYWTKTDKYDKMDS---KGIETVRRDNCRLVSTVIETCLHKML---------I 810
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ +++K++ +DL + ++ L ITK L K +YT ++A HV +A R+ +
Sbjct: 811 DRDVKGAEDYVKQVISDLLQNKIDMSQLVITKALAKT--DYTAKQA--HVVLAERMKERD 866
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y++ + + AA +++ + I L+NN + ID YYL Q+ + R+
Sbjct: 867 AGSAPALGDRVAYVVIKGMKNAAAYEKSEDPIYVLENN--IPIDTKYYLENQLSKPLMRI 924
Query: 1011 LEPIEGTDA 1019
EP+ G A
Sbjct: 925 FEPVLGEKA 933
>gi|71005878|ref|XP_757605.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
gi|46097098|gb|EAK82331.1| hypothetical protein UM01458.1 [Ustilago maydis 521]
Length = 1057
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 246/489 (50%), Gaps = 66/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+ + L +E +Y++P
Sbjct: 487 NYIEMARVTGVPFNYL---LSRGQQIKVVSQLFRKANEDNYLVP---------------- 527
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
A KG+G + Y G VLEPK G+YD+ I +DF SLYPS++ +N+C+TT+
Sbjct: 528 AYKGEGTEDQ-YEGATVLEPKAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDKKTIDR 586
Query: 668 VRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ + QD D IT Y ++ G+LP+ ++ L+ +R++ KA +K+ +D +
Sbjct: 587 LELKQDEDYVITPNNNYFATKKLRKGLLPTVLENLLAARKRAKADLKK---ETDPFKRAV 643
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------- 775
D RQ ALK++ANS+YG G + ++ TA GR+++ TK+ VE
Sbjct: 644 LDGRQLALKISANSVYGFTGATIGKLPCLEISMSTTAYGRQMIEQTKTYVEKHYTIANGY 703
Query: 776 -LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLK 833
+ EV+YGDTDS+MI V D ++G + +K + ++L+ + VY LL+
Sbjct: 704 EYDAEVVYGDTDSVMIKFGVPDLARAMELGAEAAGLVSKTFVDPIKLEFEKVYFPYLLIS 763
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM + KG++ VRRD +L + + ++L +
Sbjct: 764 KKRYAGLYWTRAEKYDKM----DTKGIETVRRDNCRLVQTVIETCLRKML---------I 810
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ E+ K I +DL V ++ L ITK L K+ +Y ++A HV++A R+ +
Sbjct: 811 DRDVKGAEEYAKNIISDLLQNKVDMSQLVITKALAKS--DYAAKQA--HVELAERMRKRD 866
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y+I + AA +R+ + I L +N + ID YYL Q+ + R+
Sbjct: 867 AGSAPSLGDRVAYVIVKAAKGAAAYERSEDPIYVLDHN--IPIDTRYYLENQLAKPLLRI 924
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 925 FEPIMGPKA 933
>gi|169849845|ref|XP_001831621.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|116507259|gb|EAU90154.1| delta DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 1081
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 249/488 (51%), Gaps = 63/488 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+S + L + + Y++P
Sbjct: 506 NYAEMARVTGVPFNFL---LARGQSIKVLSQLYRKANSEGYLIP---------------- 546
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
+ KG G + Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 547 SMKGGGDGEDQYEGATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKATIDR 606
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ +++D D T +Y G+LP+ ++ L+ +R++ KA +K+ +D +
Sbjct: 607 LSLVKDVDYVQTPNNDYFATPVRRKGLLPTILEDLISARKRAKADLKK---ETDPFKKAV 663
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + +++ VTA GR+++ TK VE
Sbjct: 664 LDGRQLALKISANSVYGFTGATIGKLPCLAISSSVTAYGRQMIERTKQEVEAEYTIANGH 723
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLK 833
+ EVIYGDTDS+M+ D V +G + + + + ++L+ + VY LL+
Sbjct: 724 EHDAEVIYGDTDSVMVRFGPTDLAKVMALGAEAADLVTQHFARPIKLEFEKVYYPYLLIS 783
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L ++ + S KG++ VRRD +L S + + ++L +D
Sbjct: 784 KKRYAGLYWTRADKWDKMDS---KGIETVRRDNCRLVSTVIETCLHKML---------ID 831
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
++ ++ K+I +DL + ++ L ITK L+K E+Y ++A HV++A ++ + ++
Sbjct: 832 RDVKAAEDYTKRIISDLLQNKIDMSQLVITKALSK--EKYAGKQA--HVELAAKMKDRDA 887
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y+I + + AA +++ + + L+NN L ID YYL Q+ + R+
Sbjct: 888 GSAPAVGDRVAYVIVKGARNAAAYEKSEDPLWVLENN--LPIDTRYYLDNQLSKPLMRIF 945
Query: 1012 EPIEGTDA 1019
EPI G A
Sbjct: 946 EPILGEKA 953
>gi|156407049|ref|XP_001641357.1| predicted protein [Nematostella vectensis]
gi|156228495|gb|EDO49294.1| predicted protein [Nematostella vectensis]
Length = 1092
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 243/488 (49%), Gaps = 72/488 (14%)
Query: 555 NQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N ME R+T V G +LSR G+ + LL H+ V+P + GEE
Sbjct: 521 NYMEMARVTGVPMGYLLSR----GQQIKVMSQLLRKTHQTDLVIP----AHKAEAGEE-- 570
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
Y+G V+EP KG+Y+ I +DF+SLYPSI+ +N+C+T+ +L
Sbjct: 571 ------------YAGATVIEPNKGYYNIPIATLDFSSLYPSIMMAHNLCYTS----LLHP 614
Query: 674 SDI----------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
S + T + + V G+LP ++ L+ +R++ KA +K+ +D +
Sbjct: 615 SQVKETPPDQYIKTPSGNFFVKKSVRKGLLPEILEHLLTARKKAKADLKK---ETDPFKK 671
Query: 724 --YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK LVE
Sbjct: 672 KVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFGRMMIERTKELVEAKYTVAN 731
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLL 831
+ +VIYGDTDS+M+ V ++GN+ ++ + K ++L+ + VY LL
Sbjct: 732 GYKTDAKVIYGDTDSVMVRFGVETVAESMELGNEAAEYVSEHFVKPIKLEFEKVYFPYLL 791
Query: 832 LKKKKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
+ KK+YA L +K + KM C KG++ VRRD L + + ++L E++
Sbjct: 792 ISKKRYAGLYFTKPDKHDKMDC----KGIETVRRDNCPLVANLINACLKKLLIERN---- 843
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
Q E+ K++ +DL + ++ L ITK+LTK EEY ++A H ++A R+
Sbjct: 844 -----PQGAVEYTKQVISDLLCNRIDISQLVITKELTKTGEEYAGKQA--HSELAERMRK 896
Query: 951 TNSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ K GD + Y+I A ++A + I L+NN + ID YYL Q+ +
Sbjct: 897 RDAGSAPKLGDRVPYVIIAGAKGAKAYEKAEDPIYVLENN--VPIDTGYYLENQLSKPLL 954
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 955 RIFEPILG 962
>gi|307110156|gb|EFN58392.1| DNA polymerase delta subunit [Chlorella variabilis]
Length = 1011
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 249/480 (51%), Gaps = 56/480 (11%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + +L K+ V+P+ + G + EG
Sbjct: 439 NYVEMARVTGV---PMSYLLSRGQSIKVFSQILRKSRTKNLVVPNMKRGGDPNEG----- 490
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
AY G VLEPK G+YDK + +DF SLYPSI+ +N+C+TT+ + ++
Sbjct: 491 ---------VAYEGATVLEPKAGYYDKPVATLDFASLYPSIMMAHNLCYTTLVPKGHENM 541
Query: 675 ------DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
I+ + + + TG+LP +++L+ +R++ + M + ++D ++ ++
Sbjct: 542 FPKEHLTISPNGDTFVKSSLATGVLPEILQELLAARKRARKDMGE---ATDPFLRAVFNG 598
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNT-KSLVENLN-------- 777
RQ ALK++ANS+YG G +++ VT+ GRE+++ T + ++E N
Sbjct: 599 RQMALKVSANSVYGFTGATVGALPCLEISSSVTSFGREMIMETRRRVMEKYNRANGYTHD 658
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKK 836
+VIYGDTDS+M+ V+D + ++G + E +K + K ++L+ + VY LL+ KK+
Sbjct: 659 ADVIYGDTDSVMVYFGVDDTAAAMQLGLEAAEEVSKAFIKPIKLEFEKVYNPYLLISKKR 718
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YA L +K I + KG++ VRRD L + +IL E++ +
Sbjct: 719 YAGLLWTKPEKWDKI---DTKGIETVRRDNCLLVRNVVTTCLEKILVERAPGEAC----- 770
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN-SKK 955
+++K + +DL + L+LL I+K LT+ ++Y ++ A HV++A ++ + +
Sbjct: 771 ----DYVKGVISDLLMNKLDLSLLVISKGLTQDADDYENKAA--HVELAKKMKKRDLATA 824
Query: 956 LKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + Y+I + A ++A + I L+NN L ID +YL + + RL EPI
Sbjct: 825 PAVGDRVPYVIVKAAKGAKAYEKAEDPIYALRNN--LPIDCQHYLDHHLAQPLMRLFEPI 882
>gi|156552223|ref|XP_001606357.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Nasonia
vitripennis]
Length = 1086
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 243/486 (50%), Gaps = 65/486 (13%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V LS L G+ + LL E+ Y++P +
Sbjct: 515 MEMARVTGVS---LSSLLTRGQQIKVVSQLLRKTIERGYLIP----------------VH 555
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRM---- 670
G+G + Y G V+EP +G+Y+ I +DF+SLYPSII +NIC+TT+ P
Sbjct: 556 HGQGSDEQ-YEGATVIEPLRGYYNDPIATLDFSSLYPSIIMAHNICYTTLLSPSAQNHYN 614
Query: 671 LQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
L + DI T + V GILP +++L+ +R+ KA +K+ +D L Q D
Sbjct: 615 LSNDDITRTPANSNFVKGSVRKGILPEILEQLLSARKAAKADLKK---ETDPLKQKVLDG 671
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLN 777
RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE + +
Sbjct: 672 RQYALKVSANSVYGFTGAQQGKLPCLEISGSVTAYGRTMIEKTKQEVETHYRKENGYDHD 731
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+M+ V + K+G + +K K ++L+ + VY LL+ KK+
Sbjct: 732 AVVIYGDTDSVMVKFGVKKIEDAMKLGKEAAEYVTSKFIKPIKLEFEKVYFPYLLINKKR 791
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L +K KM C KG++ VRRD L + + ++L D + DD
Sbjct: 792 YAGLYFTKPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL-----IDRNPDDA 842
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
+ ++ K+I +DL + ++ L +TK+LTK +YT ++A HV++A ++ ++
Sbjct: 843 M----DYAKQIISDLLCNRIDISQLVVTKELTKT--DYTAKQA--HVELAAKMKKRDAGT 894
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD I Y+ A Q+A + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 895 APKLGDRIPYVFISGPKGVPAYQKAEDPIYVLENN--IPIDTNYYLENQLSKPLVRIFEP 952
Query: 1014 IEGTDA 1019
I G A
Sbjct: 953 ILGDKA 958
>gi|336368221|gb|EGN96564.1| hypothetical protein SERLA73DRAFT_58496 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1084
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 249/489 (50%), Gaps = 65/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+S + L +E+ YV+P G+ E
Sbjct: 508 NYIEMSRVTGVPFNFL---LSRGQSIKVLSQLFRKANEEGYVVPALLKGEGTDE------ 558
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 559 ----------QYEGATVIEPKKGYYDSPIATLDFSSLYPSIMMAHNLCYTTLLDKTTIDR 608
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLM 722
+++++D D T ++ G+LP+ ++ L+ +R++ KA +K+ P + L
Sbjct: 609 LQLVKDVDYIQTPNNDFFATTSRRKGLLPTVLEDLISARKRAKADLKKETDPFKCAVL-- 666
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-------- 774
D RQ ALK++ANS+YG G + +++ VT+ GR+++ TK VE
Sbjct: 667 --DGRQLALKISANSVYGFTGATIGKLPCLAISSSVTSYGRQMIEKTKQEVEAEYCVANG 724
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLL 832
+ N EVIYGDTDS+M+ + V +G + + K ++L+ + VY LL+
Sbjct: 725 HDHNAEVIYGDTDSVMVKFGPAELTKVMALGIEAADLVTARFVKPIKLEFEKVYFPYLLI 784
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K + S KG++ VRRD +L S + + ++L +
Sbjct: 785 SKKRYAGLYWTKPEKYDKMDS---KGIETVRRDNCRLVSTVIETCLHKML---------I 832
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ ++ K++ +DL V ++ L ITK L+KA EY+ ++A HV++A R+ +
Sbjct: 833 DRDVKGAEDYTKRVISDLLQNKVDMSQLVITKALSKA--EYSGKQA--HVELAGRMKQRD 888
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y+I + AA +++ + + L+NN + ID YYL Q+ + R+
Sbjct: 889 AGSAPALGDRVAYVIVKGMKGAAAYEKSEDPLYVLENN--IPIDTKYYLDNQLSKPLMRI 946
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 947 FEPILGEKA 955
>gi|410902099|ref|XP_003964532.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Takifugu
rubripes]
Length = 1104
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 240/485 (49%), Gaps = 64/485 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL ++ V+P K EG E
Sbjct: 535 NYMEMARVTGV---PLTYLLSRGQQIKVVSQLLRQAMKQDLVMP-----VVKTEGGED-- 584
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT+ ++ QD
Sbjct: 585 -----------YTGATVIEPEKGYYSIPIATLDFSSLYPSIMMAHNLCYTTL-LQNTQDK 632
Query: 675 DI--------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
D T + + V G+LP ++ L+ +R++ KA +K+ +L
Sbjct: 633 DSLSPEDFIKTPTGNFFVKSSVRKGLLPEILENLLSARKRAKAELKKETDPFKRQVL--- 689
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 690 DGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEQTKQLVESKYTISNGYQ 749
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKK 834
+ +VIYGDTDS+M+ V + IG + + + ++L+ + VY LL+ K
Sbjct: 750 ADAKVIYGDTDSVMVKLGVATVNEAMSIGREAAEWVSSHFISPIKLEFEKVYYPYLLINK 809
Query: 835 KKYAAL--SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
K+YA L S S ++ KM C KG++ VRRD L + + +IL +
Sbjct: 810 KRYAGLYFSSSADTHDKMDC----KGIETVRRDNCPLVANLINTCLQKIL---------I 856
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D Q +H K++ +DL + ++ L ITK+LT+ +EY ++A HV++A R+ +
Sbjct: 857 DRDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQA--HVELAERMRKRD 914
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ GD + Y+I + AA ++ + + NS + ID YYL QQ+ + R+
Sbjct: 915 AGSAPNLGDRVPYVITKAAKGAAAYMKSEDPIYVLENS-IPIDTQYYLEQQLSKPLLRIF 973
Query: 1012 EPIEG 1016
EPI G
Sbjct: 974 EPILG 978
>gi|351727343|ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA polymerase delta catalytic subunit
gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine max]
Length = 1088
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 152/483 (31%), Positives = 245/483 (50%), Gaps = 62/483 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ V+P+ K+ G E G
Sbjct: 492 NYVEMARVTGV---PISFLLSRGQSIKVLSQLLRRARQKNLVIPNA-----KQAGSEQG- 542
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----RM 670
+ G VLE + GFY+K I +DF SLYPSI+ YN+C+ T+ + R
Sbjct: 543 ----------TFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVIPEDARK 592
Query: 671 L----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
L + + T E + + GILP +++L+ +R++ KA +K+ L +L
Sbjct: 593 LNIPPESVNRTPSGETFVKSNLQKGILPEILEELLTARKRAKADLKEAKDPLEKAVL--- 649
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LVE+
Sbjct: 650 DGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLNGYE 709
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKK 834
N EVIYGDTDS+M+ V+ + +G + + + K ++L+ + VY LL+ K
Sbjct: 710 HNAEVIYGDTDSVMVQFGVSAVEEAMNLGREAAEHISGTFTKPIKLEFEKVYYPYLLISK 769
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L +K N KM + KG++ VRRD L + +IL +D
Sbjct: 770 KRYAGLFWTKPDNFDKM----DTKGIETVRRDNCLLVKNLVNDCLHKIL---------ID 816
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ +++K +DL + L+LL ITK LTK ++Y + A HV++A R+ ++
Sbjct: 817 RDIPGAVQYVKNAISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDA 874
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD + Y+I + A +R+ + I L+NN + ID +YYL QI + R+
Sbjct: 875 ATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN--IPIDPHYYLENQISKPILRIF 932
Query: 1012 EPI 1014
EPI
Sbjct: 933 EPI 935
>gi|302687116|ref|XP_003033238.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
gi|300106932|gb|EFI98335.1| hypothetical protein SCHCODRAFT_81939 [Schizophyllum commune H4-8]
Length = 1072
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 251/488 (51%), Gaps = 64/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+S + L + +Y++P
Sbjct: 496 NYIEMARVTGVPFNYL---LARGQSIKVLSQLFRKANSDNYIIP---------------- 536
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR----- 669
A KG+G + Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+ R
Sbjct: 537 ALKGEGSDEQ-YEGATVIEPKKGYYDAPIATLDFSSLYPSIMMAHNLCYTTLVDRSTIER 595
Query: 670 --MLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+++D D T ++ + G+LP+ ++ L+ +R++ KA +K+ +D +
Sbjct: 596 LGLVKDVDYIQTPNNDFFVKATKRKGLLPTVLEDLISARKRAKADLKK---ETDPFKRAV 652
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------- 776
D RQ ALK++ANS+YG G + +++ VT+ GR+++ TK VE+
Sbjct: 653 LDGRQLALKISANSVYGFTGATIGKLPCLAISSSVTSYGRQMIEKTKQEVESQYCIANGF 712
Query: 777 --NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLK 833
+ EVIYGDTDS+M+ D +V ++G + K K ++L+ + VY LL+
Sbjct: 713 KHDAEVIYGDTDSVMVKFGPADLATVMEMGAEAADFVTGKFVKPIKLEFEKVYFPYLLIS 772
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L +K + S KG++ VRRD +L S + + ++L +D
Sbjct: 773 KKRYAGLYWTKTEKYDKLDS---KGIETVRRDNCRLVSTVIETCLHKML---------ID 820
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
++ +++K ++L V ++ L ITK L KA +YT ++A HV++A R+ +
Sbjct: 821 RDVKGAEDYVKHTISELLQNKVDMSQLVITKALAKA--DYTGKQA--HVELAERMRKRDK 876
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y+I + AA ++A + + L+NN + ID YYL Q+ + R+
Sbjct: 877 HSAPALGDRVAYVIIKGMKGAAAYEKAEDPLYVLENN--VPIDTQYYLENQLSKPLMRIF 934
Query: 1012 EPIEGTDA 1019
EPI G+ A
Sbjct: 935 EPILGSRA 942
>gi|430812887|emb|CCJ29720.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1088
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 225/419 (53%), Gaps = 48/419 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSDITT 678
Y G V+EPKKG+Y+ I+ +DF+SLYPSI+Q +N+C+TT+ + +D D
Sbjct: 568 YEGATVIEPKKGYYNVPIVTLDFSSLYPSIMQAHNLCYTTLLNYKQIETLGFEKDKDYCV 627
Query: 679 LCE---YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKL 733
E ++ H + G+LP + L+ +R++VK +K +D + D RQ ALK+
Sbjct: 628 TPENYCFVKSH-IRKGLLPQIFENLLAARQKVKIDLKN---ETDPFKKAVLDGRQLALKI 683
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYE----------VIYG 783
+ANS+YG G N + P+++ VT+ GR+++ K +E L Y VIYG
Sbjct: 684 SANSVYGFTGATNGKLPCLPISSSVTSYGRQMIERAKEEIE-LKYTIENGYSHKAYVIYG 742
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
DTDS+MI+ V D K+G + NKL K ++L+ + VY LL+ KK+YA L
Sbjct: 743 DTDSVMINFGVKDISESMKLGYEAADYVTNKLIKPIKLEFEKVYFPYLLISKKRYAGLFW 802
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+K I S KG++ +RRD +L S + ++ ++L +Q D QN +
Sbjct: 803 TKPETFDKIDS---KGIETIRRDNCRLVSTVIETILRKLLIDQDV------DGAQN---Y 850
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K++ +DL + ++ L ITK LTK+ +Y ++A HV++A R+ +S GD
Sbjct: 851 VKRVISDLLQNKIDMSNLVITKTLTKS--DYISKQA--HVELAERIRKRDSGLAPTLGDR 906
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
++YII + + R+ + I L+NN + ID YYL Q+ + R+ EPI G A
Sbjct: 907 VAYIIVKGAKGDQTFLRSEDPIYVLENN--IPIDTKYYLDNQLSKPLLRIFEPILGEKA 963
>gi|449547887|gb|EMD38854.1| hypothetical protein CERSUDRAFT_112578 [Ceriporiopsis subvermispora
B]
Length = 1085
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 250/489 (51%), Gaps = 66/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+S + L +E+ Y++P
Sbjct: 510 NYTEMARVTGVPFNYL---LSRGQSIKVLSQLFRRANEEGYLIP---------------- 550
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
+ KG+G + Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 551 SLKGEGSDEQ-YEGATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLDKNTIDR 609
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ +++D D T ++ + G+LP+ ++ L+ +R++ KA +K+ +D +
Sbjct: 610 MNLVKDIDYIQTPNNDFFVKSTKRKGLLPTILEDLISTRKRAKADLKK---ETDPFKRAV 666
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + +++ VT+ GR+++ TK VE
Sbjct: 667 LDGRQLALKISANSVYGFTGATIGKLPCLAISSSVTSYGRQMIEQTKREVEAEFSSDNGH 726
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLK 833
N +VIYGDTDS+M+ D V +G Q +K K ++L+ + VY LL+
Sbjct: 727 KHNAKVIYGDTDSVMVKFGPTDLAEVMALGAQAADFVTSKFIKPIKLEFEKVYFPYLLIS 786
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM + KG++ VRRD +L S + + ++L +
Sbjct: 787 KKRYAGLYWTRPDKYDKM----DTKGIETVRRDNCRLVSTVIETCLHKLL---------I 833
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ E+ K+I +DL V ++ L ITK L KA +Y ++A HV++A R+ +
Sbjct: 834 DRDVRGAEEYTKQIISDLLQNRVDMSQLVITKALAKA--DYAAKQA--HVELAERMKQRD 889
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y+I + AA +++ + I L+NN + ID YYL Q+ + R+
Sbjct: 890 AGSAPALGDRVAYVIIKGVKGAAAYEKSEDPIYVLENN--IPIDTKYYLENQLSNPLMRI 947
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 948 FEPILGDKA 956
>gi|307167251|gb|EFN60939.1| DNA polymerase delta catalytic subunit [Camponotus floridanus]
Length = 1092
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 241/489 (49%), Gaps = 71/489 (14%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V +S L G+ + LL EK Y++P Q G+ E
Sbjct: 521 MEMARVTGVS---ISSLLTRGQQIKVVSQLLRKTREKDYLIPVHQ-------GQVVDEQ- 569
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM------ 670
+ G V+EPK+G+Y+ I +DF+SLYPSII +N+C+TT+
Sbjct: 570 ---------FEGATVIEPKRGYYNSPIATLDFSSLYPSIIMAHNLCYTTLLTLAKKRELN 620
Query: 671 LQDSDITTLC--EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+Q+ +T + V GILP ++ L+ +R++ KA +KQ +D L Q D
Sbjct: 621 IQEDQVTVTPSNSLFIKSTVRKGILPEILENLLAARKKAKAELKQ---ETDPLKQKVLDG 677
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VEN +
Sbjct: 678 RQYALKVSANSVYGFTGAQMGKLPCLEISASVTAYGRTMIEQTKQEVENHFRIENGYKND 737
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+M+ V + ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 738 AVVIYGDTDSVMVKFGVESIEDAMELGRKAADYVTSKFIKPIKLEFEKVYFPYLLINKKR 797
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ---SYTDYSL 892
YA L +K KM C KG++ VRRD L + + +L E+ + DY+
Sbjct: 798 YAGLYFTKPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQILLIERNPHAAVDYA- 852
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
K+I +DL + L+ L ITK+LTK +Y ++A HV++A ++ +
Sbjct: 853 -----------KQIISDLLCNRIDLSQLVITKELTKT--DYAAKQA--HVELAAKMKKRD 897
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ K GD ++Y+ A Q+A + + L+N+ + ID NYYL Q+ + R+
Sbjct: 898 AGNAPKLGDRVAYVFTSAAKGTPAYQKAEDPVYALENS--IPIDTNYYLENQLAKPLVRI 955
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 956 FEPILGEKA 964
>gi|379318583|pdb|4AHC|A Chain A, Crystal Structure Of An Evolved Replicating Dna Polymerase
gi|379318584|pdb|4AHC|B Chain B, Crystal Structure Of An Evolved Replicating Dna Polymerase
gi|379318587|pdb|4AIL|C Chain C, Crystal Structure Of An Evolved Replicating Dna Polymerase
Length = 775
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 233/462 (50%), Gaps = 54/462 (11%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+++ + G L E+ LL +E++ V P NK EE +
Sbjct: 331 IQLSRLIGQPLWDVSRSSTGNLVEWFLLRKAYERNEVAP------NKPSEEEY------Q 378
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
R + +Y+GG V EP+KG +D I+ +DF +LYPSII +N+ T+ + ++ DI
Sbjct: 379 RRLRESYTGGFVKEPEKGLWDD-IVYLDFIALYPSIIITHNVSPDTLNLEGCKNYDIAPQ 437
Query: 678 ---TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
C+ +P G +PS + L+E R+++K MK+ + ++ D RQKA+KL
Sbjct: 438 VGHKFCKDIP------GFIPSLLGHLLEERQKIKTKMKETQDPIEKIL-LDYRQKAIKLL 490
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCN 793
ANS YG G+ +R++ + A VTA GR+ I L K L E ++V+Y DTD L +
Sbjct: 491 ANSFYGYYGYAKARWYCKECAESVTAWGRKYIELVWKELEEKFGFKVLYIDTDGLHATIP 550
Query: 794 VNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
+ + + K + N KL LEL+ +G YK + KK+YA + GK+I
Sbjct: 551 GGESEEIKKKALEFVKYINSKLPGLLELEYEGFYKRGFFVTKKRYAVID----EEGKVIT 606
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
+G+++VRRDWS++A E V+ IL +++ ++ + E ++K L N
Sbjct: 607 ----RGLEIVRRDWSEIAKETQARVLETILKHG-----DVEEAVRIVKEVIQK----LAN 653
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DG 970
+P L I +Q+T+ EY KA+ PHV VA +L K+K G I YI+ DG
Sbjct: 654 YEIPPEKLAIYEQITRPLHEY---KAIGPHVAVAKKL-AAKGVKIKPGMVIGYIVLRGDG 709
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
+ RA EE + K K D YY+ Q+ P V R+LE
Sbjct: 710 ---PISNRAILAEEY-DPKKHKYDAEYYIENQVLPAVLRILE 747
>gi|395331770|gb|EJF64150.1| hypothetical protein DICSQDRAFT_81194 [Dichomitus squalens LYAD-421
SS1]
Length = 1083
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 251/489 (51%), Gaps = 66/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+S + L ++ YV+P
Sbjct: 508 NYTEMARVTGVPFNYL---LARGQSIKVLSQLFRKANDDGYVVP---------------- 548
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
A KG+G + Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 549 ALKGEGSDEQ-YEGATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLDKATVDR 607
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ +++D D T + + G+LP+ ++ L+ +R++ KA +K+ +D +
Sbjct: 608 LGLVRDVDYVQTPNNDLFVKSSRRKGLLPTILEDLISARKRAKADLKK---ETDPFKRAV 664
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + +++ VTA GR+++ TK VE
Sbjct: 665 LDGRQLALKISANSVYGFTGATIGKLPCLAISSSVTAYGRQMIEKTKQEVEAEYCIANGH 724
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLK 833
+ + VIYGDTDS+M+ D +V ++G++ K K ++L+ + VY LL+
Sbjct: 725 DHDATVIYGDTDSVMVRFGPTDLPTVMRLGSEAADFVTGKFIKPIKLEFEKVYFPYLLIS 784
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM + KG++ VRRD +L S + + ++L +
Sbjct: 785 KKRYAGLYWTRPEKYDKM----DTKGIETVRRDNCRLVSTVIETCLHKLL---------I 831
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ E++K++ +DL + ++ L ITK L KA +Y ++A HV++A R+ +
Sbjct: 832 DRDVKAAEEYVKQVISDLLQNRIDMSQLVITKALAKA--DYAAKQA--HVELAERMKQRD 887
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y+I + AA +++ + I L+NN + ID YYL Q+ + R+
Sbjct: 888 AGSAPALGDRVAYVIIKGIKGAAAYEKSEDPIYVLENN--IPIDTKYYLDNQLSNPLMRI 945
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 946 FEPIMGDKA 954
>gi|268557320|ref|XP_002636649.1| Hypothetical protein CBG23360 [Caenorhabditis briggsae]
Length = 1081
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 252/492 (51%), Gaps = 65/492 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+ + ++L + ++ LP E
Sbjct: 501 NYIEMARVTGVPMNFL---LTKGQQIKILSMMLRRCKQNNFFLP-------------VIE 544
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQ 672
AN G G Y G V++P +GFY++ I +DF SLYPSI+ +N+C+TT+ + ++
Sbjct: 545 ANSGDGE---GYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLLKSPQGVE 601
Query: 673 DSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL-LMQYDIRQK 729
+ D T +Y G+LP ++ L+ +R++ K MK N + M Y+ RQ
Sbjct: 602 NKDYIRTPSGQYFATKSKRRGLLPEILEDLLAARKRAKNDMK--NEKDEFKRMVYNGRQL 659
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------N 777
ALK++ANS+YG G + ++ VTA GR+++ TKS VE + +
Sbjct: 660 ALKISANSVYGFTGATVGKLPCLEISQSVTAFGRKMIDMTKSEVERIYKKGALDGKCPAD 719
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYMLLLKKKK 836
+VIYGDTDS+M+ V + +IG + E +K++ ++L+ + VY LL+ KK+
Sbjct: 720 AKVIYGDTDSVMVKFGVENVAQAMEIGLEAAKEVSKIFTPPIKLEFEKVYFPYLLINKKR 779
Query: 837 YAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYSL 892
YA L +K + KM C KG++ VRRD L ++ + ++L D+QS D++
Sbjct: 780 YAGLYFTKPEVHDKMDC----KGLETVRRDNCPLVAKVLGVCLEKLLIDRDQQSALDFA- 834
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
KK +DL + ++LL I+K+LTK+ ++Y ++A HV++A R+ +
Sbjct: 835 -----------KKTISDLLCNKIDISLLIISKELTKSGDKYQAKQA--HVELAARMKKRD 881
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ + GD + Y+ + A +RA + L+NN + +D +YL+ Q+ + R+
Sbjct: 882 AGSAPRLGDRVPYVFVAAAKNVPAYERAEDPTFVLQNN--IPLDTKHYLTNQLAKPLARI 939
Query: 1011 LEPIEGTDAVRI 1022
EPI G A +I
Sbjct: 940 FEPILGDRAEKI 951
>gi|18976584|ref|NP_577941.1| DNA-directed DNA polymerase [Pyrococcus furiosus DSM 3638]
gi|397650711|ref|YP_006491292.1| DNA-directed DNA polymerase [Pyrococcus furiosus COM1]
gi|48428875|sp|P61875.1|DPOL_PYRFU RecName: Full=DNA polymerase; AltName: Full=Pfu polymerase
gi|48428876|sp|P61876.1|DPOL_PYRWO RecName: Full=DNA polymerase; AltName: Full=Pwo polymerase
gi|216918|dbj|BAA02362.1| DNA polymerase [Pyrococcus furiosus]
gi|2347063|gb|AAB67984.1| DNA-dependent DNA polymerase [Pyrococcus woesei]
gi|18892147|gb|AAL80336.1| DNA-directed DNA polymerase [Pyrococcus furiosus DSM 3638]
gi|393188302|gb|AFN03000.1| DNA-directed DNA polymerase [Pyrococcus furiosus COM1]
Length = 775
Score = 177 bits (448), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 233/462 (50%), Gaps = 54/462 (11%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+++ + G L E+ LL +E++ V P NK EE +
Sbjct: 331 IQLSRLVGQPLWDVSRSSTGNLVEWFLLRKAYERNEVAP------NKPSEEEY------Q 378
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
R + +Y+GG V EP+KG ++ I+ +DF +LYPSII +N+ T+ + ++ DI
Sbjct: 379 RRLRESYTGGFVKEPEKGLWEN-IVYLDFRALYPSIIITHNVSPDTLNLEGCKNYDIAPQ 437
Query: 678 ---TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
C+ +P G +PS + L+E R+++K MK+ + ++ D RQKA+KL
Sbjct: 438 VGHKFCKDIP------GFIPSLLGHLLEERQKIKTKMKETQDPIEKIL-LDYRQKAIKLL 490
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCN 793
ANS YG G+ +R++ + A VTA GR+ I L K L E ++V+Y DTD L +
Sbjct: 491 ANSFYGYYGYAKARWYCKECAESVTAWGRKYIELVWKELEEKFGFKVLYIDTDGLYATIP 550
Query: 794 VNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
+ + + K + N KL LEL+ +G YK + KK+YA + GK+I
Sbjct: 551 GGESEEIKKKALEFVKYINSKLPGLLELEYEGFYKRGFFVTKKRYAVID----EEGKVIT 606
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
+G+++VRRDWS++A E V+ IL +++ ++ + E ++K L N
Sbjct: 607 ----RGLEIVRRDWSEIAKETQARVLETILKHG-----DVEEAVRIVKEVIQK----LAN 653
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DG 970
+P L I +Q+T+ EY KA+ PHV VA +L K+K G I YI+ DG
Sbjct: 654 YEIPPEKLAIYEQITRPLHEY---KAIGPHVAVAKKL-AAKGVKIKPGMVIGYIVLRGDG 709
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
+ RA EE + K K D YY+ Q+ P V R+LE
Sbjct: 710 ---PISNRAILAEEY-DPKKHKYDAEYYIENQVLPAVLRILE 747
>gi|45357943|ref|NP_987500.1| DNA polymerase B protein [Methanococcus maripaludis S2]
gi|44920700|emb|CAF29936.1| DNA polymerase family B [Methanococcus maripaludis S2]
Length = 784
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 229/446 (51%), Gaps = 50/446 (11%)
Query: 579 SERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGF 638
S+ E+LLL ++ + P++ GK ++ R +++Y GG V EP KG
Sbjct: 358 SQMVEYLLLKNSYKMGVIAPNRPSGKEYQK------------RIRSSYEGGYVKEPLKGI 405
Query: 639 YDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEH--QVDTGILPSE 696
++ I+ MDF SLYPSII +N+ TI D + E L + GI+P
Sbjct: 406 HED-IVSMDFLSLYPSIIMSHNLSPETIDCTCCSDEENGENEEILGHKFCKKSIGIIPKT 464
Query: 697 IKKLVESRRQVKALMKQPNLSSDLLMQY---DIRQKALKLTANSMYGCLGFPNSRFFAQP 753
+ L+ R++VK ++++ + +Y D Q+++K+ ANS YG L FP +R++++
Sbjct: 465 LMDLINRRKKVKKVLREKAEKGEFDEEYQILDYEQRSIKVLANSHYGYLAFPMARWYSRD 524
Query: 754 LAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC-----NVNDYDSVFKIGNQIK 808
A + T GR+ + T EN ++VIY DTD ++ Y+ + K +K
Sbjct: 525 CAEITTHLGRQYIQKTIEEAENFGFKVIYADTDGFYSKWADDKEKLSKYELLEKTREFLK 584
Query: 809 SECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQ 868
+ N L ++EL+ +G +K + + KKKYA + N K+ +KG++VVRRDWS
Sbjct: 585 NINNTLPGEMELEFEGYFKRGIFVTKKKYALID----ENEKIT----VKGLEVVRRDWSN 636
Query: 869 LASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTK 928
++ K V++ +L E S ++N + ++ +L +G V L I QLTK
Sbjct: 637 VSKNTQKNVLNALLKEGS---------VENAKKVIQDTIKELKDGKVNNEDLLIHTQLTK 687
Query: 929 APEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNN 988
E+Y + PHV+VA ++ + + ++ GD ISYII +++ ++RA +E KN
Sbjct: 688 RIEDY--KTTAPHVEVAKKILKSGN-RVNTGDVISYIIT--SGNKSISERAEILENAKN- 741
Query: 989 SKLKIDVNYYLSQQIHPVVTRLLEPI 1014
D NYY+ QI P V RL+E +
Sbjct: 742 ----YDTNYYIENQILPPVIRLMEAL 763
>gi|401828411|ref|XP_003887919.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon hellem
ATCC 50504]
gi|392998927|gb|AFM98938.1| DNA polymerase type-B delta catalytic subunit [Encephalitozoon hellem
ATCC 50504]
Length = 974
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 221/410 (53%), Gaps = 42/410 (10%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----RMLQDSDITTLC 680
+ GG V+EPK+GFY+K + +MDF SLYPSI+ N+C+TT+ R+L T
Sbjct: 463 TFEGGFVIEPKRGFYNKPVSVMDFTSLYPSIMISNNLCYTTLLTKEQYRVLGGIRTPT-D 521
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKLTANS 737
Y + G+LP + L+ESR+++K +K+ P L + L + RQ A+KL ANS
Sbjct: 522 NYFCSAERKKGLLPRILVDLLESRKKIKEELKKEKDPALKACL----NGRQLAVKLCANS 577
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYE----------VIYGDTDS 787
+YG G + ++ VT GRE++ TK+L+E N+ VIYGDTDS
Sbjct: 578 LYGFTGASKGKLPCFEISQSVTGFGREMINFTKNLIEE-NFSKKNGYTHDSVVIYGDTDS 636
Query: 788 LMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
+MI N D VF++ +I +K + + L+ + VY LL+ KK+YA L S
Sbjct: 637 VMIDFNEEDLGRVFEMSKRISEFVTSKFVRPVSLEFEKVYYPYLLINKKRYAGLLYSNPD 696
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+ I + +G++ VRRD L EA + V+ IL +++ ++ +K +
Sbjct: 697 SPSKI---DTRGIETVRRDNCGLVKEAVETVLEMILYQRN---------VEKAKRFVKDV 744
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN-SKKLKQGDTISYI 965
DL G + L+LL I+K LTKA ++Y R+A HV++A +L + S GD + Y+
Sbjct: 745 VRDLYLGKIDLSLLVISKSLTKAGDKYGSRQA--HVELAEKLRKRDESTAPVLGDRVPYV 802
Query: 966 ICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
I + G AA +++ + + L+NN L ID YY+ QQ+ + R+ +PI
Sbjct: 803 IVKKGKGIAAYEKSEDPVYVLENN--LPIDTEYYIEQQLSKPLKRIFDPI 850
>gi|222615647|gb|EEE51779.1| hypothetical protein OsJ_33228 [Oryza sativa Japonica Group]
Length = 1100
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 247/503 (49%), Gaps = 57/503 (11%)
Query: 532 WLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFH 591
WL + P R+ K N +E R+T V +S L G+S + LL
Sbjct: 508 WLRYLPDAYLPQRL-LDKLMYIYNYVEMARVTGV---PISFLLSRGQSIKVLSQLLRKAK 563
Query: 592 EKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
+K+ V+P+ KG+ + + G VLE + GFY+K I +DF SL
Sbjct: 564 QKNLVIPNI----------------KGQASGQDTFEGATVLEARAGFYEKPIATLDFASL 607
Query: 652 YPSIIQEYNICFTT-IP---VRML----QDSDITTLCEYLPEHQVDTGILPSEIKKLVES 703
YPSI+ YN+C+ T +P R L + + T E + V GILP +++L+ +
Sbjct: 608 YPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEELLAA 667
Query: 704 RRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGR 763
R++ KA +K+ + + D RQ ALK++ANS+YG G + +++ VT+ GR
Sbjct: 668 RKRAKADLKEAKDPFERAV-LDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGR 726
Query: 764 EILLNTKSLVEN---------LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKL 814
+++ +TK LVE+ N EVIYGDTDS+M+ V+ + K+G + +
Sbjct: 727 QMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGT 786
Query: 815 Y-KQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
+ K ++L+ + +Y LL+ KK+YA L +N + + KG++ VRRD L
Sbjct: 787 FIKPIKLEFEKIYFPYLLISKKRYAGLY---WTNPEKFDKMDTKGIETVRRDNCLLVKNL 843
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
+ +IL +D + +++K +DL V L+LL ITK LTK E+Y
Sbjct: 844 VTECLHKIL---------VDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDY 894
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKL 991
+ A HV++A R+ ++ GD + Y+I + A +R+ + I L NN +
Sbjct: 895 AVKAA--HVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNN--I 950
Query: 992 KIDVNYYLSQQIHPVVTRLLEPI 1014
ID YYL QI + R+ EPI
Sbjct: 951 PIDPQYYLENQISKPLLRIFEPI 973
>gi|185177517|pdb|2JGU|A Chain A, Crystal Structure Of Dna-directed Dna Polymerase
Length = 775
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 233/462 (50%), Gaps = 54/462 (11%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+++ + G L E+ LL +E++ V P NK EE +
Sbjct: 331 IQLSRLVGQPLWDVSRSSTGNLVEWFLLRKAYERNEVAP------NKPSEEEY------Q 378
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
R + +Y+GG V EP+KG ++ I+ +D+ SLYPSII +N+ T+ + ++ DI
Sbjct: 379 RRLRESYTGGFVKEPEKGLWEN-IVYLDYKSLYPSIIITHNVSPDTLNLEGCKNYDIAPQ 437
Query: 678 ---TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
C+ +P G +PS + L+E R+++K MK+ + ++ D RQKA+KL
Sbjct: 438 VGHKFCKDIP------GFIPSLLGHLLEERQKIKTKMKETQDPIEKIL-LDYRQKAIKLL 490
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCN 793
ANS YG G+ +R++ + A VTA GR+ I L K L E ++V+Y DTD L +
Sbjct: 491 ANSFYGYYGYAKARWYCKECAESVTAWGRKYIELVWKELEEKFGFKVLYIDTDGLYATIP 550
Query: 794 VNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
+ + + K + N KL LEL+ +G YK + KK+YA + GK+I
Sbjct: 551 GGESEEIKKKALEFVKYINSKLPGLLELEYEGFYKRGFFVTKKRYAVID----EEGKVIT 606
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
+G+++VRRDWS++A E V+ IL +++ ++ + E ++K L N
Sbjct: 607 ----RGLEIVRRDWSEIAKETQARVLETILKHG-----DVEEAVRIVKEVIQK----LAN 653
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DG 970
+P L I +Q+T+ EY KA+ PHV VA +L K+K G I YI+ DG
Sbjct: 654 YEIPPEKLAIYEQITRPLHEY---KAIGPHVAVAKKL-AAKGVKIKPGMVIGYIVLRGDG 709
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
+ RA EE + K K D YY+ Q+ P V R+LE
Sbjct: 710 ---PISNRAILAEEY-DPKKHKYDAEYYIENQVLPAVLRILE 747
>gi|134046285|ref|YP_001097770.1| replicative DNA polymerase I [Methanococcus maripaludis C5]
gi|132663910|gb|ABO35556.1| replicative DNA polymerase I [Methanococcus maripaludis C5]
Length = 780
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 231/446 (51%), Gaps = 54/446 (12%)
Query: 579 SERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGF 638
S+ E+LLL + K + P++ GK ++ R +++Y GG V EP KG
Sbjct: 358 SQMVEYLLLKNSYNKGVIAPNRPSGKEYQK------------RIRSSYEGGYVKEPIKGI 405
Query: 639 YDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQV---DTGILPS 695
++ I+ MDF SLYPSII +N+ TI D + E + H+ + GI+P
Sbjct: 406 HED-IVSMDFLSLYPSIIMSHNLSPETIDCDCCNDEE----NEEILGHKFCKKNIGIIPK 460
Query: 696 EIKKLVESRRQVKALMKQPNLSSDLLMQY---DIRQKALKLTANSMYGCLGFPNSRFFAQ 752
+ L++ R+ VK ++++ + +Y D Q+++K+ ANS YG L FP +R++++
Sbjct: 461 TLMDLIDRRKSVKKILREKGEKGEFDEEYQILDYEQRSIKVLANSHYGYLAFPMARWYSR 520
Query: 753 PLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC----NVNDYDSVFKIGNQIK 808
A + T GR+ + T EN ++VIY DTD + + + + K +K
Sbjct: 521 DCAEITTHLGRQYIQKTIEEAENFGFKVIYADTDGFYSKWANGEKLTNDELLEKTKIFLK 580
Query: 809 SECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQ 868
+ +KL ++EL+ +G +K + + KKKYA + N K+ IKG++VVRRDWS
Sbjct: 581 NINDKLPGEMELEFEGYFKRGIFVTKKKYALID----ENEKIT----IKGLEVVRRDWSN 632
Query: 869 LASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTK 928
++ K V++ +L E S ++N + ++ +L + V L I QLTK
Sbjct: 633 VSKNTQKSVLNALLKEGS---------VENAKKVIQDTIKELKDRKVDKEDLLIHTQLTK 683
Query: 929 APEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNN 988
E+Y + PHV+VA ++ + + ++ GD ISYII G +++ ++RA IE K+
Sbjct: 684 RIEDY--KTTAPHVEVAKKILKSGN-RVNTGDVISYIIT--GGNKSISERAEPIETAKD- 737
Query: 989 SKLKIDVNYYLSQQIHPVVTRLLEPI 1014
D NYY+ QI P V RL+E +
Sbjct: 738 ----YDTNYYIENQILPPVIRLMEAL 759
>gi|62954913|gb|AAY23282.1| Similar to dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza
sativa Japonica Group]
Length = 629
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 153/503 (30%), Positives = 246/503 (48%), Gaps = 57/503 (11%)
Query: 532 WLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFH 591
WL + P R+ K N +E R+T V +S L G+S + LL
Sbjct: 37 WLRYLPDAYLPQRL-LDKLMYIYNYVEMARVTGV---PISFLLSRGQSIKVLSQLLRKAK 92
Query: 592 EKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
+K+ V+P+ KG+ + + G VLE + GFY+K I +DF SL
Sbjct: 93 QKNLVIPNI----------------KGQASGQDTFEGATVLEARAGFYEKPIATLDFASL 136
Query: 652 YPSIIQEYNICFTTI----PVRML----QDSDITTLCEYLPEHQVDTGILPSEIKKLVES 703
YPSI+ YN+C+ T+ R L + + T E + V GILP +++L+ +
Sbjct: 137 YPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPDVQKGILPEILEELLAA 196
Query: 704 RRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGR 763
R++ KA +K+ + + D RQ ALK++ANS+YG G + +++ VT+ GR
Sbjct: 197 RKRAKADLKEAKDPFERAV-LDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGR 255
Query: 764 EILLNTKSLVEN---------LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKL 814
+++ +TK LVE+ N EVIYGDTDS+M+ V+ + K+G + +
Sbjct: 256 QMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGT 315
Query: 815 Y-KQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
+ K ++L+ + +Y LL+ KK+YA L +N + + KG++ VRRD L
Sbjct: 316 FIKPIKLEFEKIYFPYLLISKKRYAGLY---WTNPEKFDKMDTKGIETVRRDNCLLVKNL 372
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
+ +IL +D + +++K +DL V L+LL ITK LTK E+Y
Sbjct: 373 VTECLHKIL---------VDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDY 423
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKL 991
+ A HV++A R+ ++ GD + Y+I + A +R+ + I L NN +
Sbjct: 424 AVKAA--HVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNN--I 479
Query: 992 KIDVNYYLSQQIHPVVTRLLEPI 1014
ID YYL QI + R+ EPI
Sbjct: 480 PIDPQYYLENQISKPLLRIFEPI 502
>gi|402588589|gb|EJW82522.1| DNA polymerase [Wuchereria bancrofti]
Length = 638
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 214/416 (51%), Gaps = 39/416 (9%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSD--ITT 678
Y G V++P +GFY+ I +DF SLYPSI+ +N+C+TT+ L DSD +T
Sbjct: 144 YEGATVIDPIRGFYNTPIATLDFASLYPSIMIAHNLCYTTLIRGSNATHNLSDSDFEVTP 203
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+ + G+LP ++ L+ +R+Q K +K M + RQ ALK++ANS+
Sbjct: 204 SNNRFVKSNIRRGLLPQVLEDLLNARKQAKNDLKNEK-DPFRRMVLNGRQLALKISANSV 262
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------NYEVIYGDTD 786
YG G + ++ VTA GR+++ TKS VE + N +VIYGDTD
Sbjct: 263 YGFTGASVGKLPCLEISQSVTAYGRQMIDLTKSAVEEIYKEGYLDGKCPCNAQVIYGDTD 322
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ V D + ++G +E +K + ++L+ + VY LL+ KK+YA L ++
Sbjct: 323 SVMVKFGVKDVKAAMELGLHAATEVSKKFIPPIKLEFEKVYSPFLLINKKRYAGLYFTRP 382
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
I + KG++ VRRD L S+ + ++L E T + EH KK
Sbjct: 383 EKHDKI---DCKGLETVRRDNCPLVSKVLSTCLEKMLLEGDAT---------SALEHAKK 430
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQGDTISY 964
+ +DL + ++ L ITK+LT++ Y ++A HV +A R+ +S + GD + Y
Sbjct: 431 VISDLLCNRIDISELIITKELTRSSNAYAAKQA--HVVLAERMRERDSGSAPRLGDRVPY 488
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+I G A ++A + I L+NN + ID YYL Q+ + R+ EPI G A
Sbjct: 489 VIVAKGQKVPAYEKAEDPIYVLQNN--IPIDTAYYLENQLAKPLARIFEPILGDKA 542
>gi|358057090|dbj|GAA96997.1| hypothetical protein E5Q_03671 [Mixia osmundae IAM 14324]
Length = 769
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 245/493 (49%), Gaps = 80/493 (16%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+ + L E+ YV+P
Sbjct: 196 NYIEMARVTGVPFNYL---LSRGQQIKVVSQLFRKAGEEGYVIP---------------- 236
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
+ KG+G + Y G V+EP +G+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 237 SLKGEGSDEQ-YEGATVIEPTRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLMDKKTIDR 295
Query: 668 VRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLM 722
+ L D D +T ++ + G+LP+ ++ L+ +R++ K MK P + L
Sbjct: 296 LGFLIDKDYIMTPNGDFFAKSHKRKGLLPTVLEDLLSARKRAKNDMKNETDPFKRAVL-- 353
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREIL----------LNTKSL 772
D RQ ALK++ANS+YG G + P++ TA GRE++ NTK+
Sbjct: 354 --DGRQLALKISANSVYGFTGATVGKLPCLPISTSTTAYGREMIERTKQEVQDKYNTKNG 411
Query: 773 VENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLL 831
EN + EVIYGDTDS+M+ D K+G + + K + ++L+ + VY LL
Sbjct: 412 YEN-DAEVIYGDTDSVMVRFGTKDLAETMKLGAEAAAYVTEKFVRPIKLEFEKVYYPYLL 470
Query: 832 LKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
+ KK+YA L ++ KM + KG++ VRRD QL S + ++++L E+
Sbjct: 471 ISKKRYAGLYWTRPDRYDKM----DTKGIETVRRDNCQLVSTVIETCLNKMLIERD---- 522
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA-LPHVQVALRLN 949
L E++K++ +DL + L+ L ITK L K TD KA HV++A R+
Sbjct: 523 -----LSGAEEYVKQVISDLLQNKIDLSQLVITKALAK-----TDYKAKQAHVELAERMR 572
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQI 1003
++ GD ++++I + GT++A RAY E L +N L ID YYL Q+
Sbjct: 573 KRDAGSAPSLGDRVAFVIIK-GTTDA---RAYEKSEDPIYVLDHN--LPIDTRYYLDNQL 626
Query: 1004 HPVVTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 627 SKPLMRIFEPIMG 639
>gi|336121549|ref|YP_004576324.1| DNA polymerase Pol2 [Methanothermococcus okinawensis IH1]
gi|334856070|gb|AEH06546.1| DNA polymerase Pol2 [Methanothermococcus okinawensis IH1]
Length = 810
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 240/470 (51%), Gaps = 63/470 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
RI N +SR G S+ E+LLL + +++ P++ + ++
Sbjct: 366 RIVNQTLFEVSRM---GSSQMVEYLLLKHSFKNNFLAPNRPSNREYQK------------ 410
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R + Y GG V EP KG ++ I+ MDF +LYPSII YNI TI + +D L
Sbjct: 411 RLREYYEGGYVKEPIKGMHEN-IVSMDFRALYPSIIISYNISPDTIDCKCCEDMSEKILG 469
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN-----LSSD---------LLMQYDI 726
+ + ++ G++P ++ L+E R+ +K ++K+ + L+S L+ Y+
Sbjct: 470 HWFCKKRI--GLIPMVLRNLIERRKTIKKILKEKDTEKKELNSKNNKYYNEYYKLLNYE- 526
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTD 786
QK+LK+ ANS YG + +P +R++++ A ++T GR + T E ++VIY DTD
Sbjct: 527 -QKSLKILANSHYGYMAYPRARWYSKECAEVITHLGRTYIQKTIEEAEKYGFKVIYADTD 585
Query: 787 SLMISCNVN-DYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
L N N D ++ + ++ N KL K +EL+ +G YK + + KK+YA +
Sbjct: 586 GLYAVLNENSDKKTLLNKTYEFLNKINEKLPKDMELEFEGYYKRGIFITKKRYALID--- 642
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
N K+ IKG++ VRRDWS +A + K V+ +L E + ++ +NI +K
Sbjct: 643 -ENDKI----TIKGLEFVRRDWSNIAKKTQKAVLEILLKEGNV------EKAKNI---IK 688
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
I TDL NG + L I QLTK EY + PHV+VA ++ +L GD I Y
Sbjct: 689 NIITDLKNGKIDKKDLIIYTQLTKDINEY--KTTAPHVEVAKKILKKGG-RLNIGDVIGY 745
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
II +++ ++RA E+ K+ D +YY+ QI P V R++E +
Sbjct: 746 IIT--SGNKSISERAVLPEDAKD-----YDTSYYIDNQILPPVLRIMESL 788
>gi|390596710|gb|EIN06111.1| delta DNA polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1052
Score = 176 bits (445), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 249/488 (51%), Gaps = 64/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+S + L +++ Y++P
Sbjct: 477 NYTEMARVTGVPFNYL---LARGQSIKVLSQLFRKANDEGYLVP---------------- 517
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
KG+G + Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 518 VFKGEGSDEQ-YEGATVIEPKKGYYDSPIATLDFSSLYPSIMMAHNLCYTTLLDKATIDR 576
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+++++D D T ++ G+LP+ ++ L+ +R++ KA +K+ SD +
Sbjct: 577 LQLVKDVDYIQTPNNDFFVTSTKRKGLLPTILEDLISARKRAKADLKK---ESDPFKRAV 633
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + +++ T+ GR+++ TK VE
Sbjct: 634 LDGRQLALKVSANSVYGFTGATIGKLPCLAISSSTTSYGRQMIEKTKQEVEAEYCIANGH 693
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLK 833
+ N EVIYGDTDS+M+ +D V +G++ K K ++L+ + VY LL+
Sbjct: 694 SHNAEVIYGDTDSVMVKFGPSDLKEVMALGSEAAEFVTTKFIKPIKLEFEKVYFPYLLIS 753
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L +K + S KG++ VRRD +L S + + ++L +D
Sbjct: 754 KKRYAGLYWTKPEKYDKMDS---KGIETVRRDNCRLVSTVIETCLHKML---------ID 801
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
++ E+ K++ +DL V ++ L ITK L KA +Y ++A HV++A R+ ++
Sbjct: 802 RDVKGAEEYTKQMISDLLQNKVDMSQLVITKALAKA--DYAAKQA--HVELAERMKQRDA 857
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y+I + AA +++ + I L+NN + ID YYL Q+ + R+
Sbjct: 858 GSAPALGDRVAYVIVKGIKGAAAYEKSEDPIYVLENN--IPIDTKYYLDNQLSKPLMRIF 915
Query: 1012 EPIEGTDA 1019
EPI G A
Sbjct: 916 EPILGEKA 923
>gi|262367838|pdb|3A2F|A Chain A, Crystal Structure Of Pyrococcus Furiosus Dna PolymerasePCNA
Monomer Mutant Complex
Length = 775
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 232/462 (50%), Gaps = 54/462 (11%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+++ + G L E+ LL +E++ V P NK EE +
Sbjct: 331 IQLSRLVGQPLWDVSRSSTGNLVEWFLLRKAYERNEVAP------NKPSEEEY------Q 378
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
R + +Y+GG V EP+KG ++ I+ +DF +LYPSII +N+ T+ + ++ DI
Sbjct: 379 RRLRESYTGGFVKEPEKGLWEN-IVYLDFRALYPSIIITHNVSPDTLNLEGCKNYDIAPQ 437
Query: 678 ---TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
C+ +P G +PS + L+E R+++K K+ + ++ D RQKA+KL
Sbjct: 438 VGHKFCKDIP------GFIPSLLGHLLEERQKIKTKXKETQDPIEKIL-LDYRQKAIKLL 490
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCN 793
ANS YG G+ +R++ + A VTA GR+ I L K L E ++V+Y DTD L +
Sbjct: 491 ANSFYGYYGYAKARWYCKECAESVTAWGRKYIELVWKELEEKFGFKVLYIDTDGLYATIP 550
Query: 794 VNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
+ + + K + N KL LEL+ +G YK + KK+YA + GK+I
Sbjct: 551 GGESEEIKKKALEFVKYINSKLPGLLELEYEGFYKRGFFVTKKRYAVID----EEGKVIT 606
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
+G+++VRRDWS++A E V+ IL +++ ++ + E ++K L N
Sbjct: 607 ----RGLEIVRRDWSEIAKETQARVLETILKHG-----DVEEAVRIVKEVIQK----LAN 653
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DG 970
+P L I +Q+T+ EY KA+ PHV VA +L K+K G I YI+ DG
Sbjct: 654 YEIPPEKLAIYEQITRPLHEY---KAIGPHVAVAKKL-AAKGVKIKPGXVIGYIVLRGDG 709
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
+ RA EE + K K D YY+ Q+ P V R+LE
Sbjct: 710 ---PISNRAILAEEY-DPKKHKYDAEYYIENQVLPAVLRILE 747
>gi|218185393|gb|EEC67820.1| hypothetical protein OsI_35398 [Oryza sativa Indica Group]
Length = 1087
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 240/480 (50%), Gaps = 56/480 (11%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ V+P+
Sbjct: 517 NYVEMARVTGV---PISFLLSRGQSIKVLSQLLRKAKQKNLVIPNI-------------- 559
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IP---VRM 670
KG+ + + G VLE + GFY+K I +DF SLYPSI+ YN+C+ T +P R
Sbjct: 560 --KGQASGQDTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARK 617
Query: 671 L----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
L + + T E + V GILP +++L+ +R++ KA +K+ + + D
Sbjct: 618 LNLPPESVNKTPSGETFVKPDVQKGILPEILEELLAARKRAKADLKEAKDPFERAV-LDG 676
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LN 777
RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LVE+ N
Sbjct: 677 RQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHN 736
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKK 836
EVIYGDTDS+M+ V+ + K+G + + + K ++L+ + +Y LL+ KK+
Sbjct: 737 AEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGTFIKPIKLEFEKIYFPYLLISKKR 796
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YA L +N + + KG++ VRRD L + +IL +D +
Sbjct: 797 YAGLY---WTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKIL---------VDRDV 844
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+++K +DL V L+LL ITK LTK E+Y + A HV++A R+ ++
Sbjct: 845 PGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAA--HVELAERMRKRDAATA 902
Query: 957 KQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + Y+I + A +R+ + I L NN + ID YYL QI + R+ EPI
Sbjct: 903 PTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNN--IPIDPQYYLENQISKPLLRIFEPI 960
>gi|449017897|dbj|BAM81299.1| DNA polymerase delta, catalytic subunit [Cyanidioschyzon merolae
strain 10D]
Length = 1084
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 235/478 (49%), Gaps = 53/478 (11%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G + LL HE ++PD E
Sbjct: 505 NYMELARVTGV---PLDWLLSRGHMVKVVSLLHRKAHEADLLVPDL----------PRTE 551
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
A G Y G V+EPKKGFY I MDF SLYPSI+ YN+C++T ++ +S
Sbjct: 552 AGGRSGDGGPQYEGATVIEPKKGFYRTPIATMDFASLYPSIMMAYNLCYST----LVHES 607
Query: 675 DI----------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ- 723
D+ T L + V GIL +++ + SR+ K M+ N + L +
Sbjct: 608 DVPKLKPDDYIRTPLGHCFVKPSVRKGILSEMLEEFLASRKAAKRDMQ--NATDPFLREV 665
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--NYEVI 781
+ RQ ALK++AN++YG G + ++A VT+ GR ++ T+S VE L EVI
Sbjct: 666 LNGRQLALKISANAVYGFTGASVGKLPCMEISASVTSYGRNMIELTRSTVERLYPGAEVI 725
Query: 782 YGDTDSLMISCNVN-DYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAA 839
YGDTDS+M+ N + + V ++G + + ++ + L+ + VY LL+ KK+YA
Sbjct: 726 YGDTDSVMVKFNDHATLEQVMELGREAAKQLTNIFPPPVRLEFEKVYYPYLLISKKRYAG 785
Query: 840 LSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
L ++L + KM C KG++ VRRD +L + V+ ++L EQ +
Sbjct: 786 LYWTRLERHDKMDC----KGIESVRRDNCRLVANVVDTVLQKLLIEQD---------VDG 832
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
E +KKI +DL + L+LL ++K LT+A +Y ++A HV + +L +S
Sbjct: 833 AIEFVKKIVSDLLQNRIDLSLLVVSKTLTRATTDYEAKQA--HVFLVEKLRKRDSGSAPS 890
Query: 959 -GDTISYIICEDGT-SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + Y+I + T +E A RA + + NS + ID +YYL + + R+ +
Sbjct: 891 LGDRVPYVIIKGATKNEKAYTRAEDPIYVLENS-IPIDAHYYLENMLRKPLERIFSAV 947
>gi|115484523|ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group]
gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA polymerase delta catalytic subunit
gi|9188570|dbj|BAA99573.1| OsPol delta large subunit [Oryza sativa Japonica Group]
gi|62734232|gb|AAX96341.1| dna polymerase delta catalytic subunit (ec 2.7.7.7) [Oryza sativa
Japonica Group]
gi|77549018|gb|ABA91815.1| DNA polymerase delta catalytic subunit, putative, expressed [Oryza
sativa Japonica Group]
gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa Japonica Group]
Length = 1105
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 240/480 (50%), Gaps = 56/480 (11%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ V+P+
Sbjct: 535 NYVEMARVTGV---PISFLLSRGQSIKVLSQLLRKAKQKNLVIPNI-------------- 577
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IP---VRM 670
KG+ + + G VLE + GFY+K I +DF SLYPSI+ YN+C+ T +P R
Sbjct: 578 --KGQASGQDTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARK 635
Query: 671 L----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
L + + T E + V GILP +++L+ +R++ KA +K+ + + D
Sbjct: 636 LNLPPESVNKTPSGETFVKPDVQKGILPEILEELLAARKRAKADLKEAKDPFERAV-LDG 694
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LN 777
RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LVE+ N
Sbjct: 695 RQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHN 754
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKK 836
EVIYGDTDS+M+ V+ + K+G + + + K ++L+ + +Y LL+ KK+
Sbjct: 755 AEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGTFIKPIKLEFEKIYFPYLLISKKR 814
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YA L +N + + KG++ VRRD L + +IL +D +
Sbjct: 815 YAGLY---WTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKIL---------VDRDV 862
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+++K +DL V L+LL ITK LTK E+Y + A HV++A R+ ++
Sbjct: 863 PGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAA--HVELAERMRKRDAATA 920
Query: 957 KQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + Y+I + A +R+ + I L NN + ID YYL QI + R+ EPI
Sbjct: 921 PTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNN--IPIDPQYYLENQISKPLLRIFEPI 978
>gi|242060584|ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
gi|241931412|gb|EES04557.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
Length = 1101
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 151/482 (31%), Positives = 242/482 (50%), Gaps = 60/482 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ V+P+
Sbjct: 531 NYVEMARVTGV---PISFLLSRGQSIKVLSQLLRKAKQKNLVIPNI-------------- 573
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IP---VRM 670
KG+G + + G VLE + GFY+K I +DF SLYPSI+ YN+C+ T +P R
Sbjct: 574 --KGQGSGQDTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARK 631
Query: 671 L----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
L + + T E + ++ GILP +++L+ +R++ KA +K+ L +L
Sbjct: 632 LNLPPESINKTPSGEIFVKPELQKGILPEILEELLAARKRAKADLKEAKDPLERAVL--- 688
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LVE+
Sbjct: 689 DGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 748
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKK 834
N EVIYGDTDS+M+ V+ + K+G + + + K ++L+ + VY LL+ K
Sbjct: 749 HNAEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGTFTKPIKLEFEKVYFPYLLISK 808
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L +N + + KG++ VRRD L + +IL +D
Sbjct: 809 KRYAGLY---WTNPEKFDKMDAKGIETVRRDNCLLVKNLVTECLHKIL---------VDR 856
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ +++K +DL V L+LL ITK LTK E+Y + A HV++A R+ +
Sbjct: 857 DVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAA--HVELAERMRKRDPA 914
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD + Y+I + A +++ + I L NN + ID YYL QI + R+ E
Sbjct: 915 TAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNN--IPIDPQYYLENQISKPLLRIFE 972
Query: 1013 PI 1014
PI
Sbjct: 973 PI 974
>gi|389745703|gb|EIM86884.1| hypothetical protein STEHIDRAFT_79581, partial [Stereum hirsutum
FP-91666 SS1]
Length = 1077
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 250/487 (51%), Gaps = 62/487 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+S + L +++ YV+P
Sbjct: 502 NYTEMARVTGVPFNYL---LSRGQSIKVLSQLFRKANDEGYVVP---------------- 542
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
+ KG+G + Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 543 SLKGEGSDEQ-YEGATVIEPKKGYYDAPIATLDFSSLYPSIMMAHNLCYTTLLDKNTIDR 601
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ + +D D T ++ + G+LP+ ++ L+ +R++ KA +K +D +
Sbjct: 602 LNLQKDIDYIQTPNNDFFIKSHKRKGLLPTVLEDLIGARKRAKADLKN---ETDPFKRAV 658
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + P+++ VT+ GR+++ TKS VE
Sbjct: 659 LDGRQLALKVSANSVYGFTGATIGKLPCLPISSSVTSYGRQMIEKTKSEVEAEYCVANGH 718
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLK 833
+ + +VIYGDTDS+M+ D + V ++G++ K K ++L+ + VY LL+
Sbjct: 719 SHDAKVIYGDTDSVMVKFGPPDLEKVMQLGSEAAEFVTQKFVKPIKLEFEKVYFPYLLIS 778
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L ++ + S KG++ VRRD +L S + + ++L +D
Sbjct: 779 KKRYAGLYWTRPDKYDKMDS---KGIETVRRDNCRLVSTVIETCLHKML---------ID 826
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
++ ++ K++ +DL V ++ L ITK L KA +Y ++A HV++A R+ ++
Sbjct: 827 RDVKGAEDYTKQVISDLLQNKVDMSQLVITKALAKA--DYAAKQA--HVELAERMKQRDA 882
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD ++Y+I + AA +++ + + NS + ID YYL Q+ + R+ E
Sbjct: 883 GSAPALGDRVAYVIVKGIKGAAAYEKSEDPIYVLENS-IPIDTKYYLENQLSKPLMRIFE 941
Query: 1013 PIEGTDA 1019
PI G A
Sbjct: 942 PILGDKA 948
>gi|302803951|ref|XP_002983728.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
gi|300148565|gb|EFJ15224.1| hypothetical protein SELMODRAFT_180322 [Selaginella moellendorffii]
Length = 984
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 249/482 (51%), Gaps = 60/482 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + +L ++++V+P+
Sbjct: 414 NYIEMARVTGV---PISFLLSRGQSIKVLSQILRKCRQRNFVVPNI-------------- 456
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
KG+G + + G VLE + GFY+K I +DF SLYPSI+ YN+C+ T+ VR +
Sbjct: 457 --KGQGAGQETFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTL-VRTEDQA 513
Query: 675 DI---------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
+ T E + ++ GILP +++L+ +R++ +A +K+ S + + D
Sbjct: 514 RLNIAPENVNKTPSGEMFVKTNMEKGILPEILEELLAARKRARADLKEATDSLEKAV-LD 572
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--------- 776
RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK+LVE
Sbjct: 573 GRQLALKVSANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKTLVEGRFNTSNKYDN 632
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKK 835
N EVIYGDTDS+M+ V+ + +G + ++ + K ++L+ + VY LL+ KK
Sbjct: 633 NAEVIYGDTDSVMVQFGVSTVEDAMNLGREAADYISETFTKPIKLEFEKVYFPYLLISKK 692
Query: 836 KYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
+YA L +K + KM + KG++ VRRD L K V++Q L + +D
Sbjct: 693 RYAGLLWTKPAKYDKM----DTKGIETVRRDNCLLV----KNVVTQSLHK-----ILVDR 739
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ + +K + +DL + L+LL ITK LTK ++Y + A HV++A R+ ++
Sbjct: 740 DVPGAVDFVKGMISDLLMNRMDLSLLVITKGLTKTGDDYAVKAA--HVELAERMRKRDAA 797
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD + Y+I + A +R+ + I L+NN + ID YYL Q+ + R+ E
Sbjct: 798 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN--IPIDPQYYLENQLSKPLLRIFE 855
Query: 1013 PI 1014
PI
Sbjct: 856 PI 857
>gi|300707422|ref|XP_002995919.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
gi|239605160|gb|EEQ82248.1| hypothetical protein NCER_101069 [Nosema ceranae BRL01]
Length = 977
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 217/408 (53%), Gaps = 36/408 (8%)
Query: 624 AAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD---SDITTLC 680
+ Y GG V++P +GFY + I ++DF+SLYPSI+ N+C++T+ + D T
Sbjct: 464 STYEGGFVMDPMRGFYPQPIAVLDFSSLYPSIMISRNLCYSTLLTKEQYDKFGGTKTPTN 523
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLTANSM 738
Y + +V G+LP + L+ SR+ K K+ N SD ++ + RQ A+K+ ANS+
Sbjct: 524 NYFVDSKVKQGLLPKVLINLLASRKATK---KEMNAESDPGIKACLNARQTAIKVCANSI 580
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGDTDSLM 789
YG G + ++ T+ GRE++ TK+++E+ + VIYGDTDS+M
Sbjct: 581 YGFTGANTGKLPCVEISQSTTSFGREMIAFTKNIIESTFCKEKGYSHDSIVIYGDTDSVM 640
Query: 790 ISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNG 848
I+ ND VF++ ++I K K + L+ + VY LL+ KK+YA L + +
Sbjct: 641 INFKENDMKRVFEMASEISEFVTTKFIKPVSLEFEKVYYPYLLINKKRYAGLIYNNPNTP 700
Query: 849 KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT 908
I + KG++ VRRD L E + +++IL D ++ ++KKI
Sbjct: 701 SKI---DTKGIETVRRDNCNLVKEVIETCLNKIL---------YDKDVEGAKTYVKKIVQ 748
Query: 909 DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIIC 967
DL G + L+ L I+K +TKA ++Y ++A HV++A ++ + G+ ++YI+
Sbjct: 749 DLYQGKIDLSQLVISKSITKAGDKYASKQA--HVELAEKMRKRGDESAGALGNRVAYIMV 806
Query: 968 EDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
E G A +A + + L++N L ID YY+ QQ+ + RL EPI
Sbjct: 807 EKGKKVAGYDKAEDPVYVLEHN--LPIDTEYYIEQQLAKPLHRLFEPI 852
>gi|324120740|dbj|BAJ78761.1| DNA polymerase delta catalytic subunit [Bemisia tabaci]
Length = 1094
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 243/491 (49%), Gaps = 71/491 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL EK +++P TG
Sbjct: 521 NYMEMARVTGV---PLASLLTRGQQIKVVSQLLRKAREKGFLMP-----------THTG- 565
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
G++ + G V+EPKKG+Y++ I +DF+SLYPSI+ +N+C+TT+ ++D
Sbjct: 566 -----GQQDDQFEGATVIEPKKGYYNEPIATLDFSSLYPSIMMAHNLCYTTLLQPNMKDK 620
Query: 675 -----DI---TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
D+ T + + V G+LP + L+ +R++ KA +K+ +D Q
Sbjct: 621 LNLSPDMYVKTPAQNFFVKSSVRKGLLPEILDDLLTARKKAKADLKK---ETDPFKQKVL 677
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 678 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQHYCIANGFK 737
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
+ EVIYGDTDS+M+ ++ + +G + +K ++L+ + VY LL+ K
Sbjct: 738 YDAEVIYGDTDSVMVRFGFDNLEETMNLGREAAEYVTSKFINPIKLEFEKVYFPYLLINK 797
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDY 890
K+YA L ++ KM C KG++ VRRD L + + ++L D+ S Y
Sbjct: 798 KRYAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANVMNMCLQKLLIDRDQVSAVAY 853
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+ KK+ +DL + ++ L ITK+LTK+ +Y ++A HV++A ++
Sbjct: 854 A------------KKVISDLLCNRMDISQLVITKELTKS--DYAAKQA--HVELAKKMKK 897
Query: 951 TNSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ K GD + ++ C G A ++A + I L+NN + ID NYYL Q+ +
Sbjct: 898 RDAGTAPKLGDRVPFVFCAAGKGTPAYEKAEDPIFVLENN--MPIDANYYLENQLSKPLL 955
Query: 1009 RLLEPIEGTDA 1019
R+ PI G A
Sbjct: 956 RIFSPILGDKA 966
>gi|443899075|dbj|GAC76406.1| ribonucleotide reductase, alpha subunit [Pseudozyma antarctica T-34]
Length = 1160
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 245/489 (50%), Gaps = 66/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+ + L +E +Y++P
Sbjct: 590 NYIEMARVTGVPFNYL---LSRGQQIKVVSQLFRKANEDNYLVP---------------- 630
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
A KG+G + Y G VLEPK G+YD+ I +DF SLYPS++ +N+C+TT+
Sbjct: 631 AYKGEGTEDQ-YEGATVLEPKAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDKKTIDR 689
Query: 668 VRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ + QD D +T ++ G+LP+ ++ L+ +R++ KA +K+ +D +
Sbjct: 690 LDLKQDEDYVVTPNNNCFATKKLRKGLLPTVLENLLAARKRAKADLKK---ETDPFKRAV 746
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + ++ TA GR+++ TK+ VE
Sbjct: 747 LDGRQLALKISANSVYGFTGATIGKLPCLEISMSTTAYGRQMIDQTKAYVERHYTIANGY 806
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLK 833
+ EV+YGDTDS+MI V D ++G + + +K + ++L+ + VY LL+
Sbjct: 807 QHDAEVVYGDTDSVMIKFGVPDLAKAMELGAEAAALVSKTFVDPIKLEFEKVYFPYLLIS 866
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K KM + KG++ VRRD +L + ++L +
Sbjct: 867 KKRYAGLYWTKPEKYDKM----DTKGIETVRRDNCRLVQTVIDTCLRKML---------I 913
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ E+ K I +DL V ++ L ITK L KA +Y ++A HV++A R+ +
Sbjct: 914 DRDVKGAEEYAKNIISDLLQNKVDMSQLVITKALAKA--DYAAKQA--HVELAERMRKRD 969
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y+I + AA +R+ + I L +N + ID YYL Q+ + R+
Sbjct: 970 AGSAPALGDRVAYVIVKAAKGAAAYERSEDPIYVLDHN--IPIDTRYYLENQLAKPLLRI 1027
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 1028 FEPIMGPKA 1036
>gi|302801963|ref|XP_002982737.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
gi|300149327|gb|EFJ15982.1| hypothetical protein SELMODRAFT_155333 [Selaginella moellendorffii]
Length = 980
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 249/482 (51%), Gaps = 60/482 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + +L ++++V+P+
Sbjct: 410 NYIEMARVTGV---PISFLLSRGQSIKVLSQILRKCRQRNFVVPNI-------------- 452
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
KG+G + + G VLE + GFY+K I +DF SLYPSI+ YN+C+ T+ VR +
Sbjct: 453 --KGQGAGQETFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTL-VRTEDQA 509
Query: 675 DI---------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
+ T E + ++ GILP +++L+ +R++ +A +K+ S + + D
Sbjct: 510 RLNIAPENVNKTPSGETFVKTNMEKGILPEILEELLAARKRARADLKEATDSLEKAV-LD 568
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--------- 776
RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK+LVE
Sbjct: 569 GRQLALKVSANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKTLVEGRFNTSNKYDN 628
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKK 835
N EVIYGDTDS+M+ V+ + +G + + + K ++L+ + VY LL+ KK
Sbjct: 629 NAEVIYGDTDSVMVQFGVSTVEDAMNLGREAADYISGTFTKPIKLEFEKVYFPYLLISKK 688
Query: 836 KYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
+YA L +K + KM + KG++ VRRD L K V++Q L + +D
Sbjct: 689 RYAGLLWTKPAKYDKM----DTKGIETVRRDNCLLV----KNVVTQSLHK-----ILVDR 735
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ +++K + +DL + L+LL ITK LTK ++Y + A HV++A R+ ++
Sbjct: 736 DVPGAVDYVKGMISDLLMNRMDLSLLVITKGLTKTGDDYAVKAA--HVELAERMRKRDAA 793
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD + Y+I + A +R+ + I L+NN + ID YYL Q+ + R+ E
Sbjct: 794 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN--IPIDPQYYLENQLSKPLLRIFE 851
Query: 1013 PI 1014
PI
Sbjct: 852 PI 853
>gi|225431691|ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
gi|296088521|emb|CBI37512.3| unnamed protein product [Vitis vinifera]
Length = 1089
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 240/482 (49%), Gaps = 60/482 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ VLP+ K+ G E G
Sbjct: 519 NYVEMARVTGV---PISFLLSRGQSIKVLSQLLRKAKQKNLVLPNV-----KQAGSEQG- 569
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRM 670
Y G VLE GFY+K I +DF SLYPSI+ YN+C+ T+ VR
Sbjct: 570 ----------TYEGATVLEANAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRK 619
Query: 671 L----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
L + + T E + + GILP +++L+ +R++ KA +K+ L +L
Sbjct: 620 LNLPPECVNKTPSGEIFVKSSLQKGILPEILEELLAARKRAKADLKEAKDPLEKAVL--- 676
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------N 775
D RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LVE
Sbjct: 677 DGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTKKLVEEKFTTLGGYE 736
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKK 834
N EVIYGDTDS+M+ V+ ++ +G + + + K ++L+ + VY LL+ K
Sbjct: 737 HNAEVIYGDTDSVMVLFGVSTVEAAMNLGREAAEYISGTFMKPIKLEFEKVYYPYLLISK 796
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L +N + KG++ VRRD L K + +IL +D
Sbjct: 797 KRYAGL---LWTNPDKFDKMDTKGIETVRRDNCLLVKNLVKECLHKIL---------IDR 844
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ +++K DL + L+LL ITK LTK ++Y + A HV++A R+ ++
Sbjct: 845 DIPGAVQYVKNTIADLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAA 902
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD + Y+I + A +R+ + I L+NN + ID YYL QI + R+ E
Sbjct: 903 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN--IPIDPQYYLENQISKPLLRIFE 960
Query: 1013 PI 1014
PI
Sbjct: 961 PI 962
>gi|328720536|ref|XP_001948892.2| PREDICTED: DNA polymerase delta catalytic subunit-like [Acyrthosiphon
pisum]
Length = 1093
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 236/488 (48%), Gaps = 65/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L GG+ + LL EK+Y++P
Sbjct: 519 NYMEMARVTGV---PLGSLLTGGQQAKVVSQLLRLAQEKNYIMP---------------- 559
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT------TIPV 668
G + + G V+EP KG+Y I +DF SLYPSI+ +N+C+T TI +
Sbjct: 560 -TMAGGMQDEQFEGATVIEPIKGYYADPIATLDFTSLYPSIMMAHNLCYTTLLSQKTINL 618
Query: 669 RMLQDSDITTL--CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
L ++D T Y + + G+LP ++ L+ +R++ K +K + + D
Sbjct: 619 LNLSENDYTKTPSGSYFLSNSIRKGLLPEILENLLSARKKAKTDLKSETDPFKIKV-LDG 677
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE-- 779
RQ ALK++ANS+YG G + ++ VT+ GR ++ TK VE YE
Sbjct: 678 RQLALKISANSVYGFTGAQVGKLPCLEISTSVTSYGRTMIERTKQEVEQKYCIANGYEHD 737
Query: 780 --VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+M+ V + ++G + K K ++LD + VY LL+ KK+
Sbjct: 738 AVVIYGDTDSVMVKFGVKSIEKAMELGREAAEYVTTKFIKPIKLDFEKVYFPYLLINKKR 797
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ KM C KG++ VRRD S L S + ++L +D
Sbjct: 798 YAGLYFTRPDKYDKMDC----KGLETVRRDNSPLVSNMINTCLQKLL---------IDRD 844
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL---NNTN 952
+ K++ +DL + ++ L ITK+LTK +YT ++A HV++++++ + N
Sbjct: 845 PDGAVAYAKEVISDLLCNRIDISQLVITKELTK--NDYTAKQA--HVELSIKMKKRDPGN 900
Query: 953 SKKLKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ KL GD I YI+ A QRA + I L+NN + ID NYYL Q+ + R+
Sbjct: 901 APKL--GDRIPYILITGTKGSPAYQRAEDPIFVLENN--IPIDFNYYLENQLSKPLVRIF 956
Query: 1012 EPIEGTDA 1019
PI G A
Sbjct: 957 SPILGDKA 964
>gi|157875046|ref|XP_001685930.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
gi|68129003|emb|CAJ06437.1| putative DNA polymerase delta catalytic subunit [Leishmania major
strain Friedlin]
Length = 1032
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 248/491 (50%), Gaps = 63/491 (12%)
Query: 555 NQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N +E R+T V G +L R G+ + +LL +K V+P +Y TG
Sbjct: 460 NNVEMARVTGVPVGWLLER----GQQIKVFSMLLRKAQKKKLVVPTVEY---------TG 506
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVR 669
+++G Y G V++P KGFY+ + +DF SLYPSII +N+C++T+ R
Sbjct: 507 GSDRG-------YEGATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTLVRPADAR 559
Query: 670 MLQDS--DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI- 726
+ + D + + + +V GILP ++ L+ +R+ +A+MK ++S ++Y +
Sbjct: 560 LYPEDALDRSPTSDVFVKKEVFPGILPEVLQDLLAARKHARAMMKDVPMNS---LEYKVL 616
Query: 727 --RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--NYEVIY 782
RQ ALK++ANS+YG G + ++A VTA GR+++ TK+LVE+L V+Y
Sbjct: 617 NGRQLALKVSANSVYGFTGAQVGKLPCLEISASVTAYGRQMIDRTKNLVEDLYPGARVLY 676
Query: 783 GDTDSLMISCNVNDYDS---------VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
GDTDS+M+ C ++ S F I K N L K ++L+ + VY LL+
Sbjct: 677 GDTDSVMVKCVTDEKASDKERLQEAMDFGIEAAEKVSSNFL-KPIKLEFEKVYFPYLLMN 735
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L +N + KG++ VRRD L + V+++IL +S
Sbjct: 736 KKRYAGL---LWTNTDRFDKLDAKGIETVRRDNCPLVARMVSGVLNRILIHRS------- 785
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+++ E +K +DL + ++ L ITK +KA +EY +A H+ + R+ +
Sbjct: 786 --VESAVEFVKGTISDLLLNRLDISNLVITKAFSKAEDEYAGAQA--HIALVERMRQRDP 841
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y+I + A +R+ + I L NN + ID YYL Q+ P + R+
Sbjct: 842 ASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNN--IPIDTQYYLEHQLAPPILRVF 899
Query: 1012 EPIEGTDAVRI 1022
E + +V I
Sbjct: 900 EGVLDDPSVLI 910
>gi|168019806|ref|XP_001762435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686513|gb|EDQ72902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1173
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 249/484 (51%), Gaps = 63/484 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL ++++VLP+ K +G GE
Sbjct: 587 NYVEMARVTGV---PISFLLARGQSIKVLSQLLRKSKQRNFVLPNV-----KSQGAGGGE 638
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR----- 669
+ G VL+ K G+YDK I +DF SLYPSI+ YN+C+ T+ VR
Sbjct: 639 T----------FEGATVLDAKAGYYDKPIATLDFASLYPSIMMAYNLCYCTL-VRAEDLQ 687
Query: 670 --MLQDSDITTL--CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
ML ++T + + ++ GILP +++L+ +R++ KA +K+ ++D L +
Sbjct: 688 KFMLGPEEVTKTPSGDVFVKPSLEKGILPEILEELLAARKRAKADLKE---ATDPLEKAV 744
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LV+
Sbjct: 745 LDGRQLALKVSANSVYGFTGATVGQLPCLEISSSVTSFGRQMIDHTKKLVQERFNTSNSY 804
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLK 833
+ + EVIYGDTDS+M+ D D K+G + + + + K ++L+ + VY LL+
Sbjct: 805 SYDAEVIYGDTDSVMVQFGTPDVDEAMKLGREAAQQISATFTKPIKLEFEKVYWPYLLIS 864
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K KM + KG++ VRRD L + +IL +
Sbjct: 865 KKRYAGLLWTKPEKYDKM----DTKGIETVRRDNCLLVKNLITECLHKIL---------I 911
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D + +++K +DL + L+LL ITK LTKA + Y + A HV++A R+ +
Sbjct: 912 DRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKAGDAYESKTA--HVELAERMRKRD 969
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD + Y+I + A +++ + I L+NN + ID YYL Q+ + R+
Sbjct: 970 AATAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENN--IPIDPQYYLENQLSKPLLRI 1027
Query: 1011 LEPI 1014
+PI
Sbjct: 1028 FDPI 1031
>gi|242070347|ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
gi|241936293|gb|EES09438.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
Length = 1099
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 151/482 (31%), Positives = 241/482 (50%), Gaps = 60/482 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ V+P+
Sbjct: 529 NYVEMARVTGV---PISFLLSRGQSIKVLSQLLRKAKQKNLVIPNI-------------- 571
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IP---VRM 670
KG+G + + G VLE + GFY+K I +DF SLYPSI+ YN+C+ T +P R
Sbjct: 572 --KGQGSGQDTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARK 629
Query: 671 L----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
L + + T E + ++ GILP +++L+ +R++ KA +K+ L +L
Sbjct: 630 LNLPPESINKTPSGEIFVKPELQKGILPEILEELLAARKRAKADLKEAKDPLERAVL--- 686
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LVE+
Sbjct: 687 DGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTVGGYE 746
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKK 834
N EVIYGDTDS+M+ V+ K+G + + + K ++L+ + VY LL+ K
Sbjct: 747 HNAEVIYGDTDSVMVQFGVSTVQDAMKLGREAADYISGTFTKPIKLEFEKVYFPYLLISK 806
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L +N + + KG++ VRRD L + +IL +D
Sbjct: 807 KRYAGLY---WTNPEKFDKMDAKGIETVRRDNCLLVKNLVTECLHKIL---------VDR 854
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ +++K +DL V L+LL ITK LTK E+Y + A HV++A R+ +
Sbjct: 855 DVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAA--HVELAERMRKRDPA 912
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD + Y+I + A +++ + I L NN + ID YYL QI + R+ E
Sbjct: 913 TAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNN--IPIDPQYYLENQISKPLLRIFE 970
Query: 1013 PI 1014
PI
Sbjct: 971 PI 972
>gi|291190618|ref|NP_001167152.1| DNA polymerase delta catalytic subunit [Salmo salar]
gi|223648376|gb|ACN10946.1| DNA polymerase delta catalytic subunit [Salmo salar]
Length = 1105
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 240/485 (49%), Gaps = 63/485 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL ++ V+P K EG E
Sbjct: 535 NYMEMARVTGV---PLTYLLSRGQQIKVVSQLLRQAMKQGLVMP-----VVKPEGGED-- 584
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR----- 669
Y+G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT+ +
Sbjct: 585 -----------YTGATVIEPEKGYYSVPIATLDFSSLYPSIMMAHNLCYTTLLQKGSAEK 633
Query: 670 -MLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-YD 725
L D T + + V G+LP ++ L+ +R++ KA +K N + Q D
Sbjct: 634 LGLNPEDFIKTPTGDLFVKSSVRKGLLPDILEDLLSARKKAKAELK--NETDPFKKQVLD 691
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------L 776
RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 692 GRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEQTKQLVESKYTIANGYQA 751
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYMLLLKKK 835
+ +VIYGDTDS+M+ V+ ++G + + + ++L+ + VY LL+ KK
Sbjct: 752 DAKVIYGDTDSVMVKLGVDTVSRAMEVGREAAEWVSSHFTPPIKLEFEKVYYPYLLINKK 811
Query: 836 KYAAL--SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
+YA L S S ++ KM C KG++ VRRD L + + IL +D
Sbjct: 812 RYAGLYFSSSADTHDKMDC----KGIETVRRDNCTLVANLINTCLQTIL---------ID 858
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
Q H K++ +DL + ++ L ITK+LT+ +EY ++A HV++A R+ ++
Sbjct: 859 RDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAAKQA--HVELAERMKKRDA 916
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
Q GD + Y+I + AA ++ + I L+NN + ID YYL QQ+ + R+
Sbjct: 917 GSAPQLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENN--IPIDTQYYLEQQLSKPLLRIF 974
Query: 1012 EPIEG 1016
EPI G
Sbjct: 975 EPILG 979
>gi|170574522|ref|XP_001892851.1| DNA polymerase delta catalytic subunit [Brugia malayi]
gi|158601393|gb|EDP38315.1| DNA polymerase delta catalytic subunit, putative [Brugia malayi]
Length = 1084
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 214/416 (51%), Gaps = 39/416 (9%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSD--ITT 678
Y G V++P +GFY+ I +DF SLYPSI+ +N+C+TT+ L DSD +T
Sbjct: 559 YEGATVIDPIRGFYNTPIATLDFASLYPSIMIAHNLCYTTLIRGSNASHNLSDSDVEVTP 618
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+ + G+LP ++ L+ +R+Q K +K M + RQ ALK++ANS+
Sbjct: 619 SNNRFVKSNIRRGLLPQVLEDLLNARKQAKNDLKNEQ-DPFRRMVLNGRQLALKISANSV 677
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------NYEVIYGDTD 786
YG G + ++ VTA GR+++ TKS VE + + +VIYGDTD
Sbjct: 678 YGFTGASVGKLPCLEISQSVTAYGRQMIDLTKSAVEQIYKEGYLDGKCPCDAQVIYGDTD 737
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ V D + ++G +E +K + ++L+ + VY LL+ KK+YA L ++
Sbjct: 738 SVMVKFGVKDVKAAMELGLHAATEVSKKFIPPIKLEFEKVYSPFLLINKKRYAGLYFTRP 797
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
I + KG++ VRRD L S+ + ++L E T + EH KK
Sbjct: 798 EKHDKI---DCKGLETVRRDNCPLVSKVLSTCLEKMLLEGDAT---------SALEHAKK 845
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQGDTISY 964
+ +DL + ++ L ITK+LT++ Y ++A HV +A R+ +S + GD + Y
Sbjct: 846 VISDLLCNRIDISELIITKELTRSSNAYAAKQA--HVVLAERMRERDSGSAPRLGDRVPY 903
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+I G A ++A + I L+NN + ID YYL Q+ + R+ EPI G A
Sbjct: 904 VIVAKGQKVPAYEKAEDPIYVLQNN--IPIDTAYYLENQLAKPLARIFEPILGDKA 957
>gi|422294898|gb|EKU22198.1| DNA polymerase delta subunit 1 [Nannochloropsis gaditana CCMP526]
Length = 569
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 235/472 (49%), Gaps = 51/472 (10%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+ V G ++ L G+ + +LL + + ++P+ KN+++
Sbjct: 1 MARVTGVPMAFLLTRGQQIKVFSMLLRKCRQSALLIPN--LPKNRQD------------- 45
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR-----MLQDSDI 676
+ Y G V+EPKK FY I +DF SLYPSI+Q +N+C++T+ R + S I
Sbjct: 46 -EGTYEGATVIEPKKAFYQDPIATLDFASLYPSIMQAFNLCYSTLLSREEKQALPPSSYI 104
Query: 677 TTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
TT E + V GILP + +L+ +R++ K M + +Q + RQ ALK++A
Sbjct: 105 TTPSQESFVKPSVRKGILPLILDELLAARKRAKRDMAAATDPMEKAVQ-NGRQLALKISA 163
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDTD 786
NS+YG G + P+A+ VT+ GR++L TK+ VE + N EV+YGDTD
Sbjct: 164 NSVYGFTGATVGQLPCIPIASSVTSYGRDLLYQTKAFVEEHYTIEKGCSANAEVVYGDTD 223
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ V + + + E K++ ++L+ + VY LL+ KK+YA L ++
Sbjct: 224 SVMVRFGVPTVEEAMPLAERAAEEVTKIFPPPIKLEFEKVYFPYLLMNKKRYAGLLWTRP 283
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+ + KG++ VRRD L + +IL +D + + K
Sbjct: 284 DKYDKL---DTKGLETVRRDNCLLVRRVIDTCLRKIL---------IDRDVPGAIGYCKH 331
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEE--YTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
+ +L + ++LL ITK L K+ +E Y ++A HV++A+R+ + GD +
Sbjct: 332 VIAELLQNKMDISLLVITKALGKSADESGYAAKQA--HVELAMRMKKRDPGTAPNVGDRV 389
Query: 963 SYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
+Y+I + G A +R+ + + N ++ ID +YYL Q+ +TRL EPI
Sbjct: 390 AYVIIQAGKGAPAYERSEDPVYVLEN-RIPIDTDYYLQNQLSNPLTRLFEPI 440
>gi|401427880|ref|XP_003878423.1| putative DNA polymerase delta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494671|emb|CBZ29973.1| putative DNA polymerase delta catalytic subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1032
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 151/491 (30%), Positives = 248/491 (50%), Gaps = 63/491 (12%)
Query: 555 NQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N +E R+T V G +L R G+ + +LL +K V+P +Y TG
Sbjct: 460 NNVEMARVTGVPVGWLLER----GQQIKVFSMLLRKAQKKKLVVPTVEY---------TG 506
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVR 669
+++G Y G V++P KGFY+ + +DF SLYPSII +N+C++T+ R
Sbjct: 507 GSDRG-------YEGATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTLVRPADAR 559
Query: 670 ML-QDS-DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI- 726
+ +DS D + + + +V GILP ++ L+ +R+ +A+MK ++S ++Y +
Sbjct: 560 LYPEDSLDRSPTSDIFVKKEVFPGILPEVLQDLLAARKHARAMMKDVPMNS---LEYKVL 616
Query: 727 --RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--NYEVIY 782
RQ ALK++ANS+YG G + ++A VTA GR+++ TK+LVE L V+Y
Sbjct: 617 NGRQLALKVSANSVYGFTGAQVGKLPCLEISASVTAYGRQMIDRTKNLVEELYPGARVLY 676
Query: 783 GDTDSLMISCNVNDYDS---------VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
GDTDS+M+ C N+ S F I K N L ++L+ + VY LL+
Sbjct: 677 GDTDSVMVKCVTNEKASDKERLQAAMDFGIEAAEKVSSNFL-NPIKLEFEKVYFPYLLMN 735
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L +N + KG++ VRRD L + V+++IL +S
Sbjct: 736 KKRYAGL---LWTNTDRFDKLDAKGIETVRRDNCPLVARMVSGVLNRILIHRS------- 785
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+++ E +K +DL + ++ L ITK +KA +EY +A H+ + R+ +
Sbjct: 786 --VESAVEFVKGTISDLLLNRLDISNLVITKAFSKAEDEYAGAQA--HIALVERMRQRDP 841
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y+I + A +R+ + I L NN + ID YYL Q+ P + R+
Sbjct: 842 ASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNN--IPIDTQYYLEHQLAPPILRVF 899
Query: 1012 EPIEGTDAVRI 1022
E + +V I
Sbjct: 900 EGVLDDPSVLI 910
>gi|403413674|emb|CCM00374.1| predicted protein [Fibroporia radiculosa]
Length = 1060
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 247/492 (50%), Gaps = 66/492 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+S + L ++ Y++P
Sbjct: 485 NYTEMARVTGVPFNYL---LSRGQSIKVLSQLYRKANDDGYIIP---------------- 525
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
+ KG+G + Y G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 526 SLKGEGSDEQ-YEGATVIEPMKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLVDKKVIDR 584
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ +++D D T ++ G+LP+ ++ L+ +R++ K +K+ +D +
Sbjct: 585 LHLVKDVDYIQTPNNDFFVTSSKRKGLLPTILEDLIGARKRAKVDLKK---ETDPFKRAV 641
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + P+++ VTA GR+++ TK VE
Sbjct: 642 LDGRQLALKISANSVYGFTGATIGKLPCLPISSSVTAYGRQMIEKTKQEVEAEYCVANGH 701
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
+ + VIYGDTDS+M+ D +V +G Q K K ++L+ + VY LL+
Sbjct: 702 SHDAHVIYGDTDSVMVKFGPTDLPTVMALGAQAADFVTAKFIKPIKLEFEKVYFPYLLIS 761
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM + KG++ VRRD +L S + + ++L +
Sbjct: 762 KKRYAGLYWTRPDKYDKM----DTKGIETVRRDNCRLVSTVIETCLHKML---------I 808
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ E+ K+I DL V ++ L ITK L KA +Y ++A HV++A R+ +
Sbjct: 809 DRDVKGAEEYTKQIIADLLQNKVDMSQLVITKALAKA--DYAAKQA--HVELAERMKQRD 864
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y+I + AA +++ + I L+NN + ID YYL Q+ + R+
Sbjct: 865 AGSAPALGDRVAYVIIKGVKGAAAYEKSEDPIYVLENN--IPIDTKYYLENQLSNPLMRI 922
Query: 1011 LEPIEGTDAVRI 1022
EPI G A +
Sbjct: 923 FEPILGEKAASL 934
>gi|324120742|dbj|BAJ78762.1| DNA polymerase delta catalytic subunit [Uroleucon nigrotuberculatum]
Length = 1093
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 153/490 (31%), Positives = 237/490 (48%), Gaps = 69/490 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L GG+ + LL EK+Y++P
Sbjct: 519 NYMEMARVTGV---PLGSLLTGGQQAKVVSQLLRLAQEKNYIMP---------------- 559
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT------TIPV 668
G + + G V+EP KG+Y I +DF SLYPSI+ +N+C+T TI +
Sbjct: 560 -TMAGGMQDEQFEGATVIEPIKGYYADPIATLDFTSLYPSIMMAHNLCYTTLLSQKTINL 618
Query: 669 RMLQDSDITTL--CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
L ++D T Y + + G+LP ++ L+ +R++ K +K +D +
Sbjct: 619 LNLSENDYTKTPSGSYFLSNSIRKGLLPEILENLLSARKKAKTDLKS---ETDPFKKKVL 675
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE 779
D RQ ALK++ANS+YG G + ++ VT+ GR ++ TK VE YE
Sbjct: 676 DGRQLALKISANSVYGFTGAQVGKLPCLEISTSVTSYGRTMIERTKQEVEQKYCIANGYE 735
Query: 780 ----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
VIYGDTDS+M+ V + ++G + K K ++LD + VY LL+ K
Sbjct: 736 HDAVVIYGDTDSVMVKFGVKTIEKAMELGREAAEYVTTKFIKPIKLDFEKVYFPYLLINK 795
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ KM C KG++ VRRD S L S + ++L +D
Sbjct: 796 KRYAGLYFTRPDKYDKMDC----KGLETVRRDNSPLVSNMINTCLQKLL---------ID 842
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL---NN 950
+ K++ +DL + ++ L ITK+LTK +YT ++A HV++++++ +
Sbjct: 843 RDPDGAVAYAKEVISDLLCNRIDISQLVITKELTK--NDYTAKQA--HVELSIKMKKRDP 898
Query: 951 TNSKKLKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
N+ KL GD I YI+ A QRA + I L+NN + ID NYYL Q+ + R
Sbjct: 899 GNAPKL--GDRIPYILITGTKGSPAYQRAEDPIFVLENN--IPIDFNYYLENQLSKPLVR 954
Query: 1010 LLEPIEGTDA 1019
+ PI G A
Sbjct: 955 IFSPILGDKA 964
>gi|84043446|ref|XP_951513.1| DNA polymerase delta catalytic subunit [Trypanosoma brucei TREU927]
gi|33348312|gb|AAQ15638.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359086|gb|AAX79533.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma brucei]
gi|261326367|emb|CBH09326.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 1026
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 242/485 (49%), Gaps = 61/485 (12%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L R G+ + +LL +++V+P
Sbjct: 451 VVVNNVEMARVTGVPIGWLLER----GQQIKVFSMLLRKARARNFVVP------------ 494
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-PVR 669
T E + R+ Y G V+EPKKG Y + I+ +DF SLYPSII +N+C++T+ P
Sbjct: 495 -TVETTGAEQRR---YEGATVIEPKKGHYIEPIVTLDFASLYPSIIIAHNLCYSTLLPGH 550
Query: 670 MLQDSDITTLCEYLPEH-----QVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
+ + + + EH +V G+LP ++ L+ +RRQ +ALMK ++S D L +Y
Sbjct: 551 EVNNYESGMKEDTPTEHKFIRKEVFPGVLPEVLRDLLAARRQARALMK--DVSQDSL-EY 607
Query: 725 DI---RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--LNYE 779
+ RQ ALK++ANS+YG G R L+A VT+ GR ++ TK VE + E
Sbjct: 608 KVLNGRQLALKVSANSVYGFTGAQVGRLPCLELSATVTSYGRRMIEETKQFVEKKYVGAE 667
Query: 780 VIYGDTDSLMISCNVNDYDS-------VFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLL 831
VIYGDTDS+MI C +N +S G + + + + L+ + VY LL
Sbjct: 668 VIYGDTDSVMIRCVINADESDTNKLQQAMDFGKEAAEAVSSTFPDPIRLEFEKVYYPFLL 727
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
+ KK+YA L +N + KG++ VRRD L + V++++L ++S
Sbjct: 728 MNKKRYAGL---LWTNTVRYDKLDAKGIETVRRDSCPLVASVISGVLNRMLIQRS----- 779
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+++ E +K DL + + ++ L ITK +K+ EY +A H+ + R+
Sbjct: 780 ----VESAVEFVKGTIRDLLHNRLDISQLVITKSFSKSESEYAGAQA--HIALVERMRRR 833
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+ GD ++Y+I A +R+ + I L+NN + ID +YL Q+ P + R
Sbjct: 834 DPASAPNVGDRVAYVIVRAAKGAKAYERSEDPIYVLENN--IPIDTQHYLEHQLGPPLLR 891
Query: 1010 LLEPI 1014
+ E +
Sbjct: 892 VFEGV 896
>gi|336476181|ref|YP_004615322.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
gi|335929562|gb|AEH60103.1| DNA polymerase Pol2 [Methanosalsum zhilinae DSM 4017]
Length = 905
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 240/491 (48%), Gaps = 67/491 (13%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+ + + G++ L GG++ E LLL F + YVLP + +
Sbjct: 384 VALAQISGSLPQEILEGGQTSMVENLLLREFRKHDYVLPPRP----------DENIVSSR 433
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
R+ GG VLEPKKG +K +IL D+ SLYP+I+ +N+C+TT+ D +I
Sbjct: 434 NRESEGLKGGEVLEPKKGLLEKVVIL-DYKSLYPTIMMAHNLCYTTVIDIERPDGNIIKP 492
Query: 678 -TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
+ E++ +V GI+PS ++ L+ R + K LMK + D YD Q ALK+ N
Sbjct: 493 PSGGEFV-SAEVFRGIVPSILENLLNRRTETKGLMKGAK-TEDEYRVYDATQLALKILLN 550
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------------------- 775
S YG G+ +R ++ LA VT+ GRE +L T+S+VE
Sbjct: 551 SFYGYSGYTRARLYSLALANAVTSFGRENILKTRSVVEKEIETVILREGKAYLKEEVTSK 610
Query: 776 ------LNYEVIYGDTDSLMISCNVN---DYDSVFKIGNQIKS-ECNKLYKQLELDIDGV 825
+ V+YGDTDS+ + C+ + + V +GN+I + L +EL+ + +
Sbjct: 611 DTDDVIVKLSVVYGDTDSVFVQCSSETNLELEDVELVGNRIAGIVSHSLPDPMELEFESI 670
Query: 826 YKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL--- 882
+ L + KK+Y AL + + S + S ++KG++ VRRDW +L S V+ IL
Sbjct: 671 AERALFIAKKRY-ALWMFERSGTEWSESIKVKGMETVRRDWCELTSRTLNSVLELILKEG 729
Query: 883 DEQSYTDY--SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALP 940
D + +Y + DR++NI D+ N + L +T+ +K+ Y +++ P
Sbjct: 730 DVEKAMEYVRGVVDRVRNI---------DVANDPEIIDDLVLTRMYSKSMGSYKNKQ--P 778
Query: 941 HVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLS 1000
H+ V ++ G+ I ++I + RA + + ++ N+ + +DV+YY+
Sbjct: 779 HLTVIEKMKKRTGAAPSIGERIPFVIV--AGKDLFVNRAEDPDYVRQNN-ISLDVDYYIK 835
Query: 1001 QQIHPVVTRLL 1011
+QI P V+R+L
Sbjct: 836 KQILPPVSRIL 846
>gi|307203676|gb|EFN82660.1| DNA polymerase delta catalytic subunit [Harpegnathos saltator]
Length = 1054
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 242/488 (49%), Gaps = 69/488 (14%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V +S L G+ + LL EK Y++P Q G T E
Sbjct: 483 MEMARVTGVS---ISSLLTRGQQIKVVSQLLRKTREKDYLMPVHQ-------GHGTDEQ- 531
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ---- 672
+ GG V+EPK+G+Y+ I +DF+SLYPSII +N+C+TT+ +
Sbjct: 532 ---------FEGGTVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLTIAKKKELN 582
Query: 673 ----DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
D + T + V GILP ++ L+ +R++ K +KQ +D L Q D
Sbjct: 583 IPEDDVNTTPSNSLFVKSSVRKGILPEILENLLAARKKAKVELKQ---ETDPLKQKVLDG 639
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV-ENLNYE------ 779
RQ ALK++ANS+YG G + ++A VTA GR ++ TK V E+ E
Sbjct: 640 RQYALKVSANSVYGFTGAQMGKLPCLEISAGVTAYGRTMIERTKQEVEEHFRIENGYKND 699
Query: 780 --VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+M+ V ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 700 AIVIYGDTDSVMVKFGVESIVEAMELGKEAADYVSSKFVKPIKLEFEKVYFPYLLINKKR 759
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L +K KM C KG++ VRRD L + + +L E++ +LD
Sbjct: 760 YAGLYFTKPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQILLIERN-PHAALD-- 812
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL---NNTN 952
+ K++ +DL + L+ L ITK+LTK +Y ++A HV++A ++ + N
Sbjct: 813 ------YAKQVISDLLCNRIDLSQLVITKELTKT--DYAAKQA--HVELATKMKKRDPGN 862
Query: 953 SKKLKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ KL GD ++Y+ A Q+A + + L+N+ + ID NYYL Q+ + R+
Sbjct: 863 APKL--GDRVAYVFISAAKGAPAYQKAEDPVYALQNS--IPIDTNYYLENQLAKPLVRIF 918
Query: 1012 EPIEGTDA 1019
EPI G A
Sbjct: 919 EPILGEKA 926
>gi|20094475|ref|NP_614322.1| B family DNA polymerase [Methanopyrus kandleri AV19]
gi|19887571|gb|AAM02252.1| B family DNA polymerase [Methanopyrus kandleri AV19]
Length = 830
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 216/409 (52%), Gaps = 37/409 (9%)
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQD 673
K R++ AY G +V EP+ G ++ ++ +DF SLYP+++ +NI T P +++
Sbjct: 424 KRRRRKAYKGAIVFEPEIGLHEN-VVCVDFASLYPNVMVAHNISPDTFDCDCCPRVTVEE 482
Query: 674 SDITTLCEYLPE--HQV---DTGILPSEIKKLVESRRQVKALMKQPNLSSDL--LMQYDI 726
D T P+ H+ G P ++ L+E RR++K +++ + S D+
Sbjct: 483 VDDPTDATVAPDVGHKFCKRRKGFFPRLVEGLIERRRELKRRLRKLDTESHPHEAKILDV 542
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV-ENLNYEVIYGDT 785
RQ+A K+ ANS YG +G+ N+R+F + A VTA GR + + + E +V+YGDT
Sbjct: 543 RQQAYKVLANSYYGYMGWANARWFCRECAESVTAWGRYYISEVRRIAEEKYGLKVVYGDT 602
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
DSL + D + + + E N +EL+++ YK +L + KKKYA +
Sbjct: 603 DSLFVKLPDADLEETIERVKEFLKEVNGRLP-VELELEDAYKRILFVTKKKYAGYT---- 657
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+GK++ KG++VVRRDW+ +A E + V+ +IL D + L+ IHE +++
Sbjct: 658 EDGKIVT----KGLEVVRRDWAPIARETQRRVLKRIL-----ADNDPEAALKEIHEVLER 708
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYI 965
+++ G V + L +T QLTK P EY + PHV+ ALRL + + G + Y+
Sbjct: 709 LKS----GDVDIDELAVTSQLTKKPSEYVQKG--PHVRAALRLARHLGVEPEPGTIVRYV 762
Query: 966 ICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
I S + +AY +E ++ K + DV+YY+ QI P V R++ I
Sbjct: 763 IVRGPGS--VSDKAYPVELVREEGK-EPDVDYYIEHQILPAVERIMRAI 808
>gi|380019903|ref|XP_003693840.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Apis florea]
Length = 1105
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 238/486 (48%), Gaps = 65/486 (13%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V +S L G+ + LL EK Y++P + G+ + E
Sbjct: 534 MEMARVTGVS---ISSLLTRGQQIKVVSQLLRKTREKDYLMPVHR-------GQASDEQ- 582
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------PVRM 670
+ G V+EPK+G+Y+ I +DF+SLYPSII +N+C+TT+
Sbjct: 583 ---------FEGATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLKYDKQTKNN 633
Query: 671 LQDSDITTLC--EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+Q +IT + + GILP ++ L+ +R+ KA +K+ +D L Q D
Sbjct: 634 IQSDNITITPNDSKFIKANIRKGILPEILENLLSARKAAKAELKK---ETDPLKQKVLDG 690
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VE N
Sbjct: 691 RQYALKVSANSVYGFTGAQMGKLPCLEISASVTAYGRTMIERTKQEVEEQYCISKGYKNN 750
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI V + ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 751 AVVVYGDTDSVMIKFGVKTVEEAMELGREAAEYVSSKFLKPIKLEFEKVYFPYLLINKKR 810
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ KM C KG++ VRRD L + + ++L +D
Sbjct: 811 YAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL---------IDRN 857
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
+ + K+I +DL + ++ L ITK+LTK +Y ++A HV++A ++ ++
Sbjct: 858 PNDAMNYAKQIISDLLCNRIDISQLVITKELTKT--DYAAKQA--HVELAAKMKKRDAGN 913
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y+ A Q+A + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 914 APKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENN--IPIDTNYYLENQLAKPLVRIFEP 971
Query: 1014 IEGTDA 1019
I G A
Sbjct: 972 ILGEKA 977
>gi|383855586|ref|XP_003703291.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Megachile
rotundata]
Length = 1091
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 242/486 (49%), Gaps = 65/486 (13%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V ++ L G+ + LL ++ Y++P G + G+E
Sbjct: 520 MEMARVTGVS---IASLLTRGQQIKVVSQLLRKIKDRDYLMP----GHQGQGGDEQ---- 568
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ---- 672
Y G V+EPK+G+Y+ I +DF+SLYPSII +N+C+TT+ Q
Sbjct: 569 ---------YEGATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLLNNESQHKYK 619
Query: 673 -DSDITTLC---EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
D D T + V GILP ++ L+ +R+ KA +K+ +D L Q D
Sbjct: 620 IDPDNVTRTPSNSMFIKANVRKGILPEILENLLTARKVAKAELKK---ETDPLKQKVLDG 676
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VE+ +
Sbjct: 677 RQYALKVSANSVYGFTGAQVGKLPCLEISASVTAYGRTMIERTKQEVEDQFCVLKGYKND 736
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+M+ V + ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 737 AVVIYGDTDSVMVKFGVKTIEEAMELGKEAAEYVTSKFLKPIKLEFEKVYFPYLLINKKR 796
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ KM C KG++ VRRD L + + ++L D + +D
Sbjct: 797 YAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL-----IDRNPNDA 847
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
L + K+I +DL + ++ L +TK+LTK +YT ++A HV++A ++ ++
Sbjct: 848 LN----YAKQIISDLLCNRIDISQLVVTKELTKT--DYTAKQA--HVELAAKMKKRDAGT 899
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y+ + A Q+A + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 900 APKLGDRVPYVFIKAAKGTPAYQKAEDPIYVLENN--VPIDTNYYLENQLSKPLVRIFEP 957
Query: 1014 IEGTDA 1019
I G A
Sbjct: 958 ILGEKA 963
>gi|398021685|ref|XP_003864005.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
gi|322502239|emb|CBZ37322.1| DNA polymerase delta catalytic subunit, putative [Leishmania
donovani]
Length = 1032
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 247/491 (50%), Gaps = 63/491 (12%)
Query: 555 NQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N +E R+T V G +L R G+ + +LL +K V+P +Y TG
Sbjct: 460 NNVEMARVTGVPVGWLLER----GQQIKVFSMLLRKAQKKKLVVPTVEY---------TG 506
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVR 669
+++G Y G V++P KGFY+ + +DF SLYPSII +N+C++T+ R
Sbjct: 507 GSDRG-------YEGATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTLVRPADAR 559
Query: 670 MLQDS--DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI- 726
+ + D + + + +V GILP ++ L+ +R+ +A+MK ++S ++Y +
Sbjct: 560 LYPEDALDRSPTSDVFVKKEVFPGILPEVLQDLLAARKHARAMMKDVPMNS---LEYKVL 616
Query: 727 --RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--NYEVIY 782
RQ ALK++ANS+YG G + ++A VTA GR+++ TK+LVE L V+Y
Sbjct: 617 NGRQLALKVSANSVYGFTGAQVGKLPCLEISASVTAYGRQMIDRTKNLVEELYPGARVLY 676
Query: 783 GDTDSLMISCNVNDYDS---------VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
GDTDS+M+ C ++ S F I K N L K ++L+ + VY LL+
Sbjct: 677 GDTDSVMVKCVTDEKSSDKERLQAAMDFGIEAAEKVSSNFL-KPIKLEFEKVYFPYLLMN 735
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L + + + KG++ VRRD L + V+++IL +S
Sbjct: 736 KKRYAGLLWTSTDRFDKL---DAKGIETVRRDNCPLVARMVSGVLNRILIHRS------- 785
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+++ E +K +DL + ++ L ITK +KA +EY +A H+ + R+ +
Sbjct: 786 --VESAVEFVKGTISDLLLNRLDISNLVITKAFSKAEDEYAGAQA--HIALVERMRQRDP 841
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y+I + A +R+ + I L NN + ID YYL Q+ P + R+
Sbjct: 842 ASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNN--IPIDTQYYLEHQLAPPIMRVF 899
Query: 1012 EPIEGTDAVRI 1022
E + +V I
Sbjct: 900 EGVLDDPSVLI 910
>gi|146097987|ref|XP_001468284.1| putative DNA polymerase delta catalytic subunit [Leishmania infantum
JPCM5]
gi|134072651|emb|CAM71367.1| putative DNA polymerase delta catalytic subunit [Leishmania infantum
JPCM5]
Length = 1032
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 247/491 (50%), Gaps = 63/491 (12%)
Query: 555 NQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N +E R+T V G +L R G+ + +LL +K V+P +Y TG
Sbjct: 460 NNVEMARVTGVPVGWLLER----GQQIKVFSMLLRKAQKKKLVVPTVEY---------TG 506
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVR 669
+++G Y G V++P KGFY+ + +DF SLYPSII +N+C++T+ R
Sbjct: 507 GSDRG-------YEGATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTLVRPADAR 559
Query: 670 MLQDS--DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI- 726
+ + D + + + +V GILP ++ L+ +R+ +A+MK ++S ++Y +
Sbjct: 560 LYPEDALDRSPTSDVFVKKEVFPGILPEVLQDLLAARKHARAMMKDVPMNS---LEYKVL 616
Query: 727 --RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--NYEVIY 782
RQ ALK++ANS+YG G + ++A VTA GR+++ TK+LVE L V+Y
Sbjct: 617 NGRQLALKVSANSVYGFTGAQVGKLPCLEISASVTAYGRQMIDRTKNLVEELYPGARVLY 676
Query: 783 GDTDSLMISCNVNDYDS---------VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
GDTDS+M+ C ++ S F I K N L K ++L+ + VY LL+
Sbjct: 677 GDTDSVMVKCVTDEKSSDKERLQAAMDFGIEAAEKVSSNFL-KPIKLEFEKVYFPYLLMN 735
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L + + + KG++ VRRD L + V+++IL +S
Sbjct: 736 KKRYAGLLWTSTDRFDKL---DAKGIETVRRDNCPLVARMVSGVLNRILIHRS------- 785
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+++ E +K +DL + ++ L ITK +KA +EY +A H+ + R+ +
Sbjct: 786 --VESAVEFVKGTISDLLLNRLDISNLVITKAFSKAEDEYAGAQA--HIALVERMRQRDP 841
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y+I + A +R+ + I L NN + ID YYL Q+ P + R+
Sbjct: 842 ASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNN--IPIDTQYYLEHQLAPPIMRVF 899
Query: 1012 EPIEGTDAVRI 1022
E + +V I
Sbjct: 900 EGVLDDPSVLI 910
>gi|213406475|ref|XP_002174009.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
gi|212002056|gb|EEB07716.1| DNA polymerase delta catalytic subunit [Schizosaccharomyces japonicus
yFS275]
Length = 1067
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 216/418 (51%), Gaps = 46/418 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP-------VRMLQDSD--I 676
Y G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+ + M QD D I
Sbjct: 547 YEGATVIEPVKGYYDTPIATLDFSSLYPSIMMAHNLCYTTLTDPETMSRLNMKQDEDYII 606
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKL 733
T +Y + G+LP + L+ +R++ KA +K+ P + L D RQ ALK+
Sbjct: 607 TPNGDYFVRSNIRKGLLPLIFEDLLGARKRAKADLKKETDPFKKAVL----DGRQLALKV 662
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGD 784
+ANS+YG G N R +++ VT+ GR+++ TKS+VE + +VIYGD
Sbjct: 663 SANSVYGFTGATNGRLPCLAISSSVTSYGRQMIEKTKSVVEQTYTIKNGYSHDAKVIYGD 722
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D V K+G + ++ ++L+ + VY LL+ KK+YA L +
Sbjct: 723 TDSVMVKFGKKDLTEVMKLGQEAADFVSDQFLNPIKLEFEKVYFPYLLISKKRYAGLFWT 782
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ + S KG++ VRRD L S + ++L +D ++
Sbjct: 783 RPEKYDKLDS---KGIETVRRDNCPLVSYVIDTALRKML---------IDQDVEGAQSFT 830
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
KKI +DL + ++ L ITK LTK +Y ++A HV++A R+ ++ GD +
Sbjct: 831 KKIISDLLQNKIDMSQLVITKALTKT--DYAAKQA--HVELAERMRKRDAGSAPALGDRV 886
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+Y+I + + R+ + + L+NN + ID YYL Q+ + R+ EPI G A
Sbjct: 887 AYVIIKGAQGDQFYMRSEDPMYVLENN--IPIDAKYYLENQLAKPLLRIFEPILGEKA 942
>gi|324120746|dbj|BAJ78764.1| DNA polymerase delta catalytic subunit [Neocolochelyna itoi]
Length = 1003
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 235/490 (47%), Gaps = 69/490 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL E+ Y++P Q G+ T E
Sbjct: 430 NYMEMARVTGVS---LCSLLTKGQGVKVVSQLLRKARERGYLMPTHQ-------GQGTDE 479
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
Y G V+EPK+G+Y+ I +D++SLYPSII +NIC+TT+
Sbjct: 480 Q----------YEGATVIEPKRGYYNDPIATLDYSSLYPSIIMAHNICYTTLLGPATQHK 529
Query: 668 VRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+++ +D T + V G+LP ++ L+ +R+ K +K D Q
Sbjct: 530 LKLTEDKYTRTPTTAMFVKSSVRKGLLPEILENLLTARKAAKTELKN---EKDPFKQKVL 586
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
D RQ ALK++ANS+YG G N + +++ TA GRE++ TK VE
Sbjct: 587 DGRQLALKVSANSVYGFTGAQNGKLPCLEISSSTTAYGREMIEQTKQEVEQRYCVANGYK 646
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
+ VIYGDTDS+M+ V + ++G + + K K ++L+ + +Y LL+ K
Sbjct: 647 HDAVVIYGDTDSVMVKFGVKTIEDAMELGTEAAEFVSLKFIKPIKLEFEKIYFPYLLINK 706
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDY 890
K+YA L ++ KM C KG++ VRRD L + + ++L D TDY
Sbjct: 707 KRYAGLLFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLLIERDPDGATDY 762
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+ K+I +DL + ++ L ITK+LTK EY ++A HV++A ++
Sbjct: 763 A------------KQIISDLLCNRIDISQLVITKELTKT--EYAAKQA--HVELAAKMKK 806
Query: 951 TNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ K GD + Y+ A Q+A + + NS + ID NYYL Q+ + R
Sbjct: 807 RDAGTAPKLGDRVPYVFTSAAKGTPAYQKAEDPIYVLENS-IPIDSNYYLENQLSKPLLR 865
Query: 1010 LLEPIEGTDA 1019
+ EPI G A
Sbjct: 866 IFEPILGDKA 875
>gi|343428135|emb|CBQ71665.1| probable DNA polymerase delta catalytic subunit [Sporisorium
reilianum SRZ2]
Length = 1057
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 244/489 (49%), Gaps = 66/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+ + L +E +Y++P
Sbjct: 487 NYIEMARVTGVPFNYL---LSRGQQIKVVSQLFRKANEDNYLVP---------------- 527
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
A KG+G + Y G VLEPK G+YD+ I +DF SLYPS++ +N+C+TT+
Sbjct: 528 AYKGEGTEDQ-YEGATVLEPKAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDKKTIDR 586
Query: 668 VRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ + QD D IT ++ G+LP+ ++ L+ +R++ KA +K+ +D +
Sbjct: 587 LELKQDEDYVITPNNNCFATKKLRKGLLPTVLENLLAARKRAKADLKK---ETDPFKRAV 643
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------- 775
D RQ ALK++ANS+YG G + ++ TA GR+++ TK+ VE
Sbjct: 644 LDGRQLALKISANSVYGFTGATIGKLPCLEISMSTTAYGRQMIEQTKTYVERHYTIANGY 703
Query: 776 -LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLK 833
+ EV+YGDTDS+MI V D ++G + +K + ++L+ + VY LL+
Sbjct: 704 EHDAEVVYGDTDSVMIKFGVPDLAKAMELGAEAAGLVSKTFVDPIKLEFEKVYFPYLLIS 763
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM + KG++ VRRD +L + ++L +
Sbjct: 764 KKRYAGLYWTRPEKYDKM----DTKGIETVRRDNCRLVQTVIDTCLRKML---------I 810
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ E+ K I +DL V ++ L ITK L K+ +Y ++A HV++A R+ +
Sbjct: 811 DRDVKGAEEYAKNIISDLLQNKVDMSQLVITKALAKS--DYAAKQA--HVELAERMRKRD 866
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y+I + AA +R+ + I L +N + ID YYL Q+ + R+
Sbjct: 867 AGSAPALGDRVAYVIVKAAKGAAAYERSEDPIYVLDHN--IPIDTRYYLENQLAKPLLRI 924
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 925 FEPIMGPKA 933
>gi|219121567|ref|XP_002181135.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407121|gb|EEC47058.1| DNA polymerase delta [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1087
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 248/495 (50%), Gaps = 64/495 (12%)
Query: 549 KYEVQCNQMEKIRITNVCGNVL-SRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK 607
K V N +E R+T V + L SR G + + +L HEK V ++
Sbjct: 498 KLSVLVNYIEMARVTGVPMSFLISR---GQQIKVFSMILRKCRHEKLLVPTLRK------ 548
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI- 666
+G AN G Y G VL+P K +Y+ I +DF SLYPSI+Q YN+C++T+
Sbjct: 549 ----SGNANADVG-----YEGATVLDPIKNYYEVPIATLDFASLYPSIMQAYNLCYSTLV 599
Query: 667 -PVRMLQ-DSDITTLCE---YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
P + + D DI E V GILP+ +++L+ +R++ K MK D
Sbjct: 600 NPADVGKLDPDIYRKSENGNVFVHSSVKKGILPTILEELLSARKRAKKDMKNAPTDFDRA 659
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
+Q + RQ ALK++ANS+YG G + P+A+ VT+ GR++L TK+ VE
Sbjct: 660 VQ-NGRQLALKVSANSVYGFTGATVGQLPCLPIASSVTSYGRQLLEKTKTFVEEKYTKSN 718
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLL 831
+ + +V+YGDTDS+M+ F + + + ++++ + L+ + VY LL
Sbjct: 719 GYDHDAQVVYGDTDSVMVKFGPATVAETFPLAIEAAEKASEIFPSPILLEFEKVYFPYLL 778
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
+ KK+YA L +++ + + KG++VVRRD QL E + +++IL
Sbjct: 779 MNKKRYAGLMWTEIEKYDKL---DTKGLEVVRRDNCQLVREVIQTSLNKIL--------- 826
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPE----------EYTDRKALPH 941
+D +Q E++K +DL + ++ L ITK L K E +Y ++A H
Sbjct: 827 IDQNVQGAIEYVKSQISDLLQNKMDISRLVITKSLNKGAEYALGLGGKKDDYKVKQA--H 884
Query: 942 VQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYL 999
V++A R+ ++ Q GD + YII A ++A + I L+NN L ID +YL
Sbjct: 885 VELAARMKKRDAGSAPQLGDRVPYIIITGAKGAANFEKAEDPIYVLENN--LPIDCKWYL 942
Query: 1000 SQQIHPVVTRLLEPI 1014
+ Q+ +TR+ EPI
Sbjct: 943 TNQLSKPLTRIFEPI 957
>gi|66511388|ref|XP_623795.1| PREDICTED: DNA polymerase delta catalytic subunit [Apis mellifera]
Length = 1105
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 239/486 (49%), Gaps = 65/486 (13%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V +S L G+ + LL EK Y++P + + ++
Sbjct: 534 MEMARVTGVS---ISSLLTRGQQIKVVSQLLRKTREKDYLMPVHRVQASDEQ-------- 582
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------PVRM 670
+ G V+EPK+G+Y+ I +DF+SLYPSII +N+C+TT+
Sbjct: 583 ---------FEGATVIEPKRGYYNDPIATLDFSSLYPSIIMAHNLCYTTLIKYDKQAKNN 633
Query: 671 LQDSDITTLC--EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+Q +IT + + GILP ++ L+ +R+ KA +K+ +D L Q D
Sbjct: 634 IQSDNITITPNDSKFVKVNIRKGILPEILENLLSARKAAKAELKK---ETDSLKQKVLDG 690
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VE N
Sbjct: 691 RQYALKVSANSVYGFTGAQMGKLPCLEISASVTAYGRNMIEQTKQEVEEQYCISKGYKNN 750
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI V + ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 751 AMVVYGDTDSVMIKFGVKTVEEAMELGREAAEYVSSKFLKPIKLEFEKVYFPYLLINKKR 810
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ KM C KG++ VRRD L + + ++L +++ +D
Sbjct: 811 YAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLLIDRNPSD------ 860
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
+ K+I +DL + ++ L ITK+LTK +Y ++A HV++A ++ ++
Sbjct: 861 ---AMNYAKQIISDLLCNRIDISQLVITKELTKT--DYAAKQA--HVELAAKMKKRDAGN 913
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y+ A Q+A + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 914 APKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENN--IPIDTNYYLENQLAKPLVRIFEP 971
Query: 1014 IEGTDA 1019
I G A
Sbjct: 972 ILGEKA 977
>gi|807830|dbj|BAA07580.1| DNA polymerase [Pyrodictium occultum]
Length = 803
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 229/458 (50%), Gaps = 59/458 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+++ V G L + G R E+ L+ A ++ + ++P++ E GE+
Sbjct: 371 IQLSTVTGVPLDQVGAMGVGFRLEWYLMRAAYDMNELVPNRV--------ERRGES---- 418
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
Y G +VL+P KG ++ ++L DF+S+YPSI+ +YN+ TI V +
Sbjct: 419 ------YKGAVVLKPLKGVHENVVVL-DFSSMYPSIMIKYNVGPDTI-VDDPSECPKYGG 470
Query: 680 CEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
C PE + G + ++ L++ RRQVK MK+ S YD RQKALK+
Sbjct: 471 CYVAPEVGHRFRRSPPGFFKTVLENLLKLRRQVKEKMKEFPPDSPEYRLYDERQKALKVL 530
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
AN+ YG +G+ ++R++ + A VTA GR ++L L +VIYGDTDSL + V
Sbjct: 531 ANASYGYMGWSHARWYCKRCAEAVTAWGRNLILTAIEYARKLGLKVIYGDTDSLFV---V 587
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICS 853
D + V K+ ++ E E+ ID +YK + + KK+Y L L +G++
Sbjct: 588 YDKEKVEKLIEFVEKELG-----FEIKIDKIYKKVFFTEAKKRYVGL----LEDGRI--- 635
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
+I G + VR DW +LA E + +L+ ++D + I E +K++R G
Sbjct: 636 -DIVGFEAVRGDWCELAKEVQEKAAEIVLNTG-----NVDKAISYIREVIKQLR----EG 685
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
VP+T L I K L+K EEY PHV A R+ ++ GD + Y+I + S
Sbjct: 686 KVPITKLIIWKTLSKRIEEYEHDA--PHVMAARRMKEAGY-EVSPGDKVGYVIVKG--SG 740
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ + RAY + ++ IDVNYY+ QI P R+L
Sbjct: 741 SVSSRAYPYFMVDPST---IDVNYYIDHQIVPAALRIL 775
>gi|357157316|ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Brachypodium
distachyon]
Length = 1106
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 145/480 (30%), Positives = 242/480 (50%), Gaps = 56/480 (11%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +++ V+P+
Sbjct: 536 NYVEMARVTGV---PISFLLSRGQSIKVLSQLLRKAKQRNLVIPNI-------------- 578
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQD 673
KG+G + + G VLE + GFY+K I +DF SLYPSI+ +N+C+ T +P ++
Sbjct: 579 --KGQGSGQDTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAHNLCYCTLVPPEDVRK 636
Query: 674 SDI-------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
++ T E + ++ GILP +++L+ +R++ KA +K+ + + D
Sbjct: 637 LNLPPESLYKTPSGEIFVKPELQKGILPEILEELLTARKRAKADLKEAKDPFERAV-LDG 695
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LN 777
RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LVE+ N
Sbjct: 696 RQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHN 755
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKK 836
EVIYGDTDS+M+ V+ + K+G + + + K ++L+ + VY LL+ KK+
Sbjct: 756 AEVIYGDTDSVMVQFGVSTVEDAMKLGREAADYISGTFIKPIKLEFEKVYFPYLLISKKR 815
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YA L +N + + KG++ VRRD L + +IL +D +
Sbjct: 816 YAGLY---WTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKIL---------VDRDV 863
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+++K +DL V L+LL ITK LTK E+Y + A HV++A R+ ++
Sbjct: 864 PGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAA--HVELAERMRKRDAATA 921
Query: 957 KQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + Y+I + A +++ + I L NN + ID YYL QI + R+ EPI
Sbjct: 922 PTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNN--IPIDPQYYLENQISKPLLRIFEPI 979
>gi|113931510|ref|NP_001039204.1| DNA-directed DNA polymerase delta 1 [Xenopus (Silurana) tropicalis]
gi|89268922|emb|CAJ83173.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Xenopus
(Silurana) tropicalis]
Length = 1109
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 235/490 (47%), Gaps = 73/490 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL ++ V+P K EG E
Sbjct: 536 NYMEMARVTGV---PLSYLLSRGQQIKVVSQLLRQAMKQDLVMP-----VVKSEGGED-- 585
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 586 -----------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTT----LLQSG 630
Query: 675 DI------------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
I T + + + G+LP ++ L+ +R++ KA +K+ +D
Sbjct: 631 SIDKYGLSPEDFIKTPTGDCFVKASIRKGLLPEILENLLCARKRAKAELKK---ETDPFK 687
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
Q D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 688 QKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLD 747
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYML 830
+ +VIYGDTDS+M V +IG + + + ++L+ + VY L
Sbjct: 748 NGYKADAKVIYGDTDSVMCKLGVQTVVEAMEIGREAAEWVSSHFTPPIKLEFEKVYFPYL 807
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S +N KM C KG++ VRRD L + + +IL
Sbjct: 808 LINKKRYAGLYFSSSANTHDKMDC----KGIETVRRDNCPLVANLINTCLQKIL------ 857
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D EH K + +DL + ++ L ITK+LT+ +EY ++A HV++A R+
Sbjct: 858 ---IDRDPMGAVEHAKDVISDLLCNRIDISQLVITKELTRTADEYAGKQA--HVELAERM 912
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
+ GD + Y+I AA ++ + I L+NN + ID YYL QQ+
Sbjct: 913 RKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPIYVLENN--IPIDTQYYLEQQLAKP 970
Query: 1007 VTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 971 LLRIFEPILG 980
>gi|340714998|ref|XP_003396008.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus terrestris]
Length = 1104
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 240/486 (49%), Gaps = 65/486 (13%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V + L G+ + LL EK Y++P + G+ + E
Sbjct: 533 MEMARVTGVS---ICSLLTRGQQIKVVSQLLRKTREKGYLIPVHR-------GQASDEQ- 581
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ---- 672
+ G V+EPK+G+Y I +DF+SLYPSII +N+C+TT+ R Q
Sbjct: 582 ---------FEGATVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLKRNTQIKLK 632
Query: 673 -DSDITTLC---EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
DSD T+ + + GILP ++ L+ +R+ KA +K+ +D L Q D
Sbjct: 633 IDSDDITVTPSDSQFVKATLRKGILPEILENLLTARKAAKAELKK---ETDPLKQKVLDG 689
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VE +
Sbjct: 690 RQYALKVSANSVYGFTGAQMGKLPCLDISASVTAYGRTMIERTKQEVEGQYCVSKGYKND 749
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI V + ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 750 AVVVYGDTDSVMIKFGVKTVEEAMELGREAAEYVSSKFLKPIKLEFEKVYFPYLLINKKR 809
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ KM C KG++ VRRD L + + ++L D + +D
Sbjct: 810 YAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL-----IDRNPNDA 860
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
L + K+I +DL + ++ L +TK+LTK +Y ++A HV++A ++ ++
Sbjct: 861 LN----YAKQIISDLLCNRIDISQLVVTKELTKT--DYAAKQA--HVELAAKMKKRDAGN 912
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y+ A Q+A + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 913 APKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENN--VPIDTNYYLENQLAKPLVRIFEP 970
Query: 1014 IEGTDA 1019
I G A
Sbjct: 971 ILGEKA 976
>gi|168003912|ref|XP_001754656.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694277|gb|EDQ80626.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1156
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 251/484 (51%), Gaps = 63/484 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL ++++VLP+ K +G +GE
Sbjct: 585 NYVEMARVTGV---PISFLLARGQSIKVLSQLLRKAKQRNFVLPNV-----KSQGVVSGE 636
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM---- 670
+ + G VL+ K G+YDK I +DF SLYPSI+ YN+C+ T+ VR
Sbjct: 637 S----------FEGATVLDAKAGYYDKPIATLDFASLYPSIMMAYNLCYCTL-VRAEDQH 685
Query: 671 ---LQDSDITTL--CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
L+ +T + + ++ GILP +++L+ +R++ KA +K L++D L +
Sbjct: 686 YLRLEPEQVTKTPSGDMFVKPSLEKGILPEILEELLAARKRAKADLK---LATDPLEKAV 742
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LV+
Sbjct: 743 LDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSFGRQMIDHTKKLVQERFTTANSY 802
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLK 833
+ + EVIYGDTDS+M+ +D ++G + + + + Q ++L+ + VY LL+
Sbjct: 803 SHDAEVIYGDTDSVMVQFGTSDVHEAMELGREAAQQISDTFTQPIKLEFEKVYWPYLLIS 862
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K KM + KG++ VRRD L + +IL +
Sbjct: 863 KKRYAGLLWTKPEKYDKM----DTKGIETVRRDNCLLVKNLVTECLHKIL---------I 909
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D + +++K +DL + L+LL ITK LTKA + Y ++ A HV++A R+ +
Sbjct: 910 DRDIPGAIQYVKNTISDLLMNRMDLSLLVITKGLTKAGDAYENKAA--HVELAERMRKRD 967
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD + Y+I + A +++ + I L+NN + ID YYL Q+ + RL
Sbjct: 968 AATAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENN--IPIDPQYYLENQLSKPLLRL 1025
Query: 1011 LEPI 1014
+PI
Sbjct: 1026 FDPI 1029
>gi|150403298|ref|YP_001330592.1| DNA polymerase Pol2 [Methanococcus maripaludis C7]
gi|150034328|gb|ABR66441.1| DNA polymerase Pol2 [Methanococcus maripaludis C7]
Length = 780
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 230/446 (51%), Gaps = 54/446 (12%)
Query: 579 SERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGF 638
S+ E+LLL + K + P++ GK ++ R +++Y GG V EP KG
Sbjct: 358 SQMVEYLLLKNSYNKGVIAPNRPSGKEYQK------------RIRSSYEGGYVKEPLKGI 405
Query: 639 YDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQV---DTGILPS 695
++ I+ MDF SLYPSII +N+ TI + + E + H+ GI+P
Sbjct: 406 HED-IVSMDFLSLYPSIIMSHNLSPETIDCTCCDNEE----NEEILGHKFCKKTIGIIPK 460
Query: 696 EIKKLVESRRQVKALMKQPNLSSDLLMQY---DIRQKALKLTANSMYGCLGFPNSRFFAQ 752
+ L++ R+ VK ++K+ + + +Y D Q+++K+ ANS YG L FP +R++++
Sbjct: 461 TLMDLIDRRKSVKKILKEKAENKEFDEEYQILDYEQRSIKVLANSHYGYLAFPMARWYSR 520
Query: 753 PLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC----NVNDYDSVFKIGNQIK 808
A + T GR+ + T EN ++VIY DTD + + + K +K
Sbjct: 521 DCAEITTHLGRQYIQKTIEEAENFGFKVIYADTDGFYSKWADGKKLTRDELLEKTKTFLK 580
Query: 809 SECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQ 868
+ +KL ++EL+ +G +K + + KKKYA + N K+ +KG++VVRRDWS
Sbjct: 581 NINDKLPGEMELEFEGYFKRGIFVTKKKYALID----ENEKIT----VKGLEVVRRDWSN 632
Query: 869 LASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTK 928
++ K V++ +L E S ++N + ++ +L NG V L I QLTK
Sbjct: 633 VSKNTQKSVLNALLKEGS---------VENAKKVIQDTIKELKNGNVKKEDLLIHTQLTK 683
Query: 929 APEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNN 988
E+Y + PHV+VA ++ + + ++ G+ ISYII +++ ++RA IE K+
Sbjct: 684 RIEDY--KTTSPHVEVAKKIIKSGN-RVNIGEVISYIIT--SGNKSISERAEPIETAKD- 737
Query: 989 SKLKIDVNYYLSQQIHPVVTRLLEPI 1014
D NYY+ QI P V RL+E +
Sbjct: 738 ----YDTNYYIENQILPPVIRLMEAL 759
>gi|312081845|ref|XP_003143198.1| DNA-directed DNA polymerase III [Loa loa]
gi|307761639|gb|EFO20873.1| DNA-directed DNA polymerase III [Loa loa]
Length = 1084
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 215/416 (51%), Gaps = 39/416 (9%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR-----MLQDSD--ITT 678
Y G V++P +GFY+ I +DF SLYPSI+ +N+C+TT+ R L DSD +T
Sbjct: 559 YEGATVIDPIRGFYNTPIATLDFASLYPSIMIAHNLCYTTLIRRPIASYNLSDSDFEVTP 618
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+ + G+LP ++ L+ +R+Q K +K M + RQ ALK++ANS+
Sbjct: 619 SNNRFVKPNIRHGLLPQVLEDLLNARKQAKNDLKNEQ-DPFRRMVLNGRQLALKISANSV 677
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------NYEVIYGDTD 786
YG G + ++ VTA GR+++ TK+ VE + + +VIYGDTD
Sbjct: 678 YGFTGASVGKLPCLEISQSVTAYGRQMIDLTKNAVEEIYKEGYLDGKCPCDAQVIYGDTD 737
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ V D + ++G +E +K + ++L+ + VY LL+ KK+YA L ++
Sbjct: 738 SVMVKFGVKDVKAAMELGLHAATEVSKKFIPPIKLEFEKVYSPFLLINKKRYAGLYFTRP 797
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
I + KG++ VRRD L S+ + ++L E T + EH KK
Sbjct: 798 EKHDKI---DCKGLETVRRDNCPLVSKVLSTCLEKMLLEGDAT---------SALEHAKK 845
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQGDTISY 964
+ +DL + ++ L ITK+LT++ Y ++A HV +A R+ +S + GD + Y
Sbjct: 846 VISDLLCNRIDISELIITKELTRSSNAYAAKQA--HVVLAERMRERDSGSAPRLGDRVPY 903
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+I G A ++A + I L+NN + ID YYL Q+ + R+ EP+ G A
Sbjct: 904 VIVAKGQKVPAYEKAEDPIYVLQNN--IPIDTAYYLENQLAKPLARIFEPVLGDKA 957
>gi|390339587|ref|XP_003725042.1| PREDICTED: DNA polymerase delta catalytic subunit-like
[Strongylocentrotus purpuratus]
Length = 1696
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 243/487 (49%), Gaps = 62/487 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL E+ V+P + ETG+
Sbjct: 1125 NYMEMARVTGV---PLTYLLSRGQQIKVVSQLLRKAKEQDLVMPAHKV--------ETGD 1173
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ GG VL+P +G+YD I +DF+SLYPSI+Q +N+C+TT+ ++++
Sbjct: 1174 D----------FVGGYVLDPIRGYYDCPIATLDFSSLYPSIMQAHNLCYTTLLSPSMKEN 1223
Query: 675 DI------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
T Y + + GILP ++ L+ +R++ KA +K+ +D L + D
Sbjct: 1224 LAPDQYIKTPTGNYFVKKSIRRGILPEILEDLLTARKRAKADLKK---ETDPLRKRVLDG 1280
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LN 777
RQ ALK++ANS+YG G + ++ TA GR ++ T+ LVE
Sbjct: 1281 RQLALKVSANSVYGFTGAQVGKLPCLEISQSTTAFGRMMIDKTRQLVETRYTVENGYKTT 1340
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKK 836
+VIYGDTDS+M+ V ++G + + + + ++L+ + VY LL+ KK+
Sbjct: 1341 SKVIYGDTDSVMVKFGVKTVAESMELGKEAAAWISDEFPPPIKLEFEKVYFPYLLINKKR 1400
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L +K KM C KG++ VRRD L S V+ +IL E+ T +LD
Sbjct: 1401 YAGLYFTKPDTYDKMDC----KGIETVRRDSCPLVSNVLNNVLQKILIERDPTG-ALD-- 1453
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
H K+ +DL + ++ L ITK+LTK EEY R+A HV++A R+ +
Sbjct: 1454 ------HTKQTISDLLCNRIDISQLVITKELTKTGEEYAGRQA--HVELAARMKKRDPGS 1505
Query: 956 LKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
GD + Y+I AA +++ + I L+NN + ID YYL Q+ + R+ EP
Sbjct: 1506 APTLGDRVPYVIIAKAKGAAAYEKSEDPIYVLENN--IPIDTTYYLENQLKGPLLRIFEP 1563
Query: 1014 IEGTDAV 1020
+ G + V
Sbjct: 1564 VVGENKV 1570
>gi|340714996|ref|XP_003396007.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus terrestris]
Length = 1090
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 240/486 (49%), Gaps = 65/486 (13%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V + L G+ + LL EK Y++P + G+ + E
Sbjct: 519 MEMARVTGVS---ICSLLTRGQQIKVVSQLLRKTREKGYLIPVHR-------GQASDEQ- 567
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ---- 672
+ G V+EPK+G+Y I +DF+SLYPSII +N+C+TT+ R Q
Sbjct: 568 ---------FEGATVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLKRNTQIKLK 618
Query: 673 -DSDITTLC---EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
DSD T+ + + GILP ++ L+ +R+ KA +K+ +D L Q D
Sbjct: 619 IDSDDITVTPSDSQFVKATLRKGILPEILENLLTARKAAKAELKK---ETDPLKQKVLDG 675
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VE +
Sbjct: 676 RQYALKVSANSVYGFTGAQMGKLPCLDISASVTAYGRTMIERTKQEVEGQYCVSKGYKND 735
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI V + ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 736 AVVVYGDTDSVMIKFGVKTVEEAMELGREAAEYVSSKFLKPIKLEFEKVYFPYLLINKKR 795
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ KM C KG++ VRRD L + + ++L D + +D
Sbjct: 796 YAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL-----IDRNPNDA 846
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
L + K+I +DL + ++ L +TK+LTK +Y ++A HV++A ++ ++
Sbjct: 847 LN----YAKQIISDLLCNRIDISQLVVTKELTKT--DYAAKQA--HVELAAKMKKRDAGN 898
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y+ A Q+A + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 899 APKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENN--VPIDTNYYLENQLAKPLVRIFEP 956
Query: 1014 IEGTDA 1019
I G A
Sbjct: 957 ILGEKA 962
>gi|327276010|ref|XP_003222764.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Anolis
carolinensis]
Length = 1100
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 235/488 (48%), Gaps = 69/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL +++ V+P K EG E
Sbjct: 527 NYMEMARVTGV---PLSYLLARGQQIKVVSQLLRQAVKQNLVMP-----VVKSEGGED-- 576
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 577 -----------YAGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTT----LLQQG 621
Query: 675 DI------------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ T ++ + V G+LP ++ L+ +R++ K +KQ +D
Sbjct: 622 AVERHGLSADKFIRTPTGDHFVKASVRKGLLPEILENLLAARKRAKTELKQ---ETDPFK 678
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 679 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTIA 738
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYML 830
+ + +V+YGDTDS+M V +IG + + + + ++L+ + VY L
Sbjct: 739 NGYSADAKVVYGDTDSVMCRLGVPSVAEAMEIGREAAAWVSSHFIPPIKLEFEKVYFPYL 798
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L S SN + KG++ VRRD L + + ++L
Sbjct: 799 LINKKRYAGLYFS--SNPDTHDKMDCKGIETVRRDNCPLVANLINTCLQKLL-------- 848
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D H K++ +DL V ++ L ITK+LT+ +EY R+A HV++A R+
Sbjct: 849 -IDRDPAGAVAHAKEVISDLLCNRVDISQLVITKELTRTADEYAGRQA--HVELAERMRR 905
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ GD + Y+I AA ++ + I L+NN L ID YYL QQ+ +
Sbjct: 906 RDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPIYVLENN--LPIDTQYYLEQQLAKPLL 963
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 964 RIFEPILG 971
>gi|350397570|ref|XP_003484917.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 1
[Bombus impatiens]
Length = 1090
Score = 172 bits (437), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 243/486 (50%), Gaps = 65/486 (13%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V + L G+ + LL EK Y++P + G+ + E
Sbjct: 519 MEMARVTGVS---ICSLLTRGQQIKVVSQLLRKTREKDYLIPVHR-------GQASDEQ- 567
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRML 671
+ G V+EPK+G+Y I +DF+SLYPSII +N+C+TT+ +++
Sbjct: 568 ---------FEGATVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLKRDTEIKLK 618
Query: 672 QDSDITTLC---EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
DSD T+ + + GILP ++ L+ +R+ KA +K+ +D L Q D
Sbjct: 619 IDSDDITVTPSDSKFVKATLRKGILPEILESLLSARKAAKAELKK---ETDPLKQKVLDG 675
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-----NLNYE-- 779
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VE + Y+
Sbjct: 676 RQYALKVSANSVYGFTGAQMGKLPCLDISASVTAYGRTMIERTKQEVEEQYCVSKGYKND 735
Query: 780 --VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI V + ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 736 AVVVYGDTDSVMIKFGVKTVEEAMELGREAAEYVSSKFLKPIKLEFEKVYFPYLLINKKR 795
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ KM C KG++ VRRD L + + ++L D + +D
Sbjct: 796 YAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL-----IDRNPNDA 846
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
L + K+I +DL + ++ L +TK+LTK +Y ++A HV++A ++ ++
Sbjct: 847 LN----YAKQIISDLLCNRIDISQLVVTKELTKT--DYAAKQA--HVELAAKMKKRDAGN 898
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y+ A Q+A + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 899 APKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENN--VPIDTNYYLENQLAKPLVRIFEP 956
Query: 1014 IEGTDA 1019
I G A
Sbjct: 957 ILGEKA 962
>gi|324120716|dbj|BAJ78749.1| DNA polymerase delta catalytic subunit [Teleogryllus emma]
Length = 1089
Score = 172 bits (437), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 239/488 (48%), Gaps = 65/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL K Y++P G +++
Sbjct: 519 NYMEMARVTGV---PLSCLLTRGQQIKVVSQLLRTAKPKGYLMPAYSSGVQEEQ------ 569
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQD 673
Y G V+EPKKG+Y I +DF+SLYPSI+ +N+C+TT +P M +
Sbjct: 570 -----------YEGATVIEPKKGYYSDPITTLDFSSLYPSIMMAHNLCYTTLLPSGMKEK 618
Query: 674 SDI-------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ T + + V G+LP ++ L+ +R++ KA +K+ +D Q
Sbjct: 619 LSLTQDQFTKTPAGNFFVKAPVRKGLLPEILENLLGARKRAKADLKK---ETDPFKQKVL 675
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE 779
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE+ Y+
Sbjct: 676 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVESHFNVSNGYQ 735
Query: 780 ----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
VIYGDTDS+M+ V + ++G + K K ++L+ + VY LL+ K
Sbjct: 736 NDAVVIYGDTDSVMVKFGVKTLEEAMELGREAAEFVTEKFVKPIKLEFEKVYYPYLLINK 795
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ KM C KG++ VRRD S L + + ++L +D
Sbjct: 796 KRYAGLYFTRPDKYDKMDC----KGIETVRRDNSPLVANMMNTCLQKLL---------ID 842
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
Q E+ K++ +DL + ++ L ITK+LTK+ +Y ++A HV +A ++ ++
Sbjct: 843 RDPQGAMEYAKQVISDLLCNRIDISQLVITKELTKS--DYAAKQA--HVTLAEKMKKRDA 898
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K GD + Y++ + A +A + I L+NN + ID YYL Q+ + R+
Sbjct: 899 GTAPKLGDRVPYVLIAAAKNTPAYMKAEDPIYVLENN--IPIDSTYYLENQLSKPLLRIF 956
Query: 1012 EPIEGTDA 1019
EPI G A
Sbjct: 957 EPILGDKA 964
>gi|159904917|ref|YP_001548579.1| DNA polymerase Pol2 [Methanococcus maripaludis C6]
gi|159886410|gb|ABX01347.1| DNA polymerase Pol2 [Methanococcus maripaludis C6]
Length = 781
Score = 172 bits (437), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 229/443 (51%), Gaps = 47/443 (10%)
Query: 579 SERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGF 638
S+ E+LLL + K + P++ GK ++ R +++Y GG V EP KG
Sbjct: 358 SQMVEYLLLKNSYNKGVIAPNRPSGKEYQK------------RIRSSYEGGYVKEPIKGI 405
Query: 639 YDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIK 698
++ I+ MDF SLYPSII +N+ TI + + + + GI+P +
Sbjct: 406 HED-IVSMDFLSLYPSIIMSHNLSPETIDCDCCNNEENEEEILGHKFCKKNIGIIPKTLM 464
Query: 699 KLVESRRQVKALMKQPNLSSDLLMQY---DIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L++ R+ VK ++++ +++ +Y D Q+++K+ ANS YG L FP +R++++ A
Sbjct: 465 DLIDRRKSVKKILREKAKNNEFDEEYQILDYEQRSIKVLANSHYGYLAFPMARWYSRDCA 524
Query: 756 ALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC----NVNDYDSVFKIGNQIKSEC 811
+ T GR+ + T EN ++VIY DTD + + + K +K+
Sbjct: 525 EITTHLGRQYIQKTIEEAENFGFKVIYADTDGFYSKWANGEKLTKDELLEKTKTFLKTIN 584
Query: 812 NKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLAS 871
+KL ++EL+ +G +K + + KKKYA + N K+ +KG++VVRRDWS ++
Sbjct: 585 DKLPGEMELEFEGYFKRGIFVTKKKYALID----ENEKIT----VKGLEVVRRDWSNVSK 636
Query: 872 EAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPE 931
K V++ +L E + ++N + ++ +L +G V L I QLTK E
Sbjct: 637 NTQKSVLNALLKEGN---------VENAKKVIQDTIKELKDGKVNKEDLLIHTQLTKRIE 687
Query: 932 EYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKL 991
+Y + PHV+VA ++ + + ++ GD ISYII +++ ++RA IE K+
Sbjct: 688 DY--KTTSPHVEVAKKIMKSGN-RVNTGDVISYIIT--SGNKSISERAEPIETAKD---- 738
Query: 992 KIDVNYYLSQQIHPVVTRLLEPI 1014
D NYY+ QI P V RL+E +
Sbjct: 739 -YDTNYYIENQILPPVIRLMEAL 760
>gi|341904443|gb|EGT60276.1| hypothetical protein CAEBREN_32385 [Caenorhabditis brenneri]
Length = 1042
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 229/433 (52%), Gaps = 49/433 (11%)
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRML 671
EAN G G Y G V+EP +GFY++ I +DF SLYPSI+ +N+C+TT+ + +
Sbjct: 574 EANSGDGE---GYEGATVIEPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLLKAPQGV 630
Query: 672 QDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL-LMQYDIRQ 728
++ D T +Y G+LP ++ ++ +R++ K MK N + M Y+ RQ
Sbjct: 631 ENEDYIRTPSGQYFATKSKRRGLLPEILEDILAARKRAKNDMK--NEKDEFKRMVYNGRQ 688
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------ 776
ALK++ANS+YG G + ++ VTA GR+++ TKS VE +
Sbjct: 689 LALKISANSVYGFTGATVGKLPCLEISQSVTAFGRKMIDMTKSEVERIYKKGALDGKCPA 748
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYMLLLKKK 835
+ +VIYGDTDS+M+ V +IG E +K++ ++L+ + VY LL+ KK
Sbjct: 749 DAKVIYGDTDSVMVKFGVETVAQAMEIGLDAAKEVSKIFTPPIKLEFEKVYSPYLLINKK 808
Query: 836 KYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYS 891
+YA L +K + KM C KG++ VRRD L ++ + ++L D+QS D++
Sbjct: 809 RYAGLYFTKPDVHDKMDC----KGLETVRRDNCPLVAKVLGVCLEKLLIERDQQSALDFA 864
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
K+ +DL + ++LL I+K+LTK+ ++Y ++A HV++A R+
Sbjct: 865 ------------KRTISDLLCNKIDISLLIISKELTKSGDKYQAKQA--HVELAARMKKR 910
Query: 952 NSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ + GD + Y+ + A +RA + L+NN + +D +YL+ Q+ + R
Sbjct: 911 DAGSAPRLGDRVPYVFIAAAKNVPAYERAEDPTFVLQNN--IPLDTKHYLTNQLAKPLAR 968
Query: 1010 LLEPIEGTDAVRI 1022
+ EPI G A +I
Sbjct: 969 IFEPILGDRAEKI 981
>gi|308504541|ref|XP_003114454.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
gi|308261839|gb|EFP05792.1| hypothetical protein CRE_27041 [Caenorhabditis remanei]
Length = 1080
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 229/433 (52%), Gaps = 49/433 (11%)
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PVRM 670
E N G G Y G V++P +GFY++ I +DF SLYPSI+ +N+C+TT+ P +
Sbjct: 543 EVNSGDGE---GYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLLKSPQGV 599
Query: 671 LQDSDITTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL-LMQYDIRQ 728
+ I T +Y G+LP ++ L+ +R++ K MK N + M Y+ RQ
Sbjct: 600 ENEDYIRTPSGQYFATKSKRHGLLPEILEDLLVARKRAKNFMK--NEKDEFKRMVYNGRQ 657
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------ 776
ALK++ANS+YG G + ++ VTA GR+++ TKS VE +
Sbjct: 658 LALKISANSVYGFTGAVVGKLPCLEISQSVTAFGRKMIDMTKSEVERIYKKGALEGKCPA 717
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYMLLLKKK 835
+ +VIYGDTDS+M+ V + +IG + E +K++ ++L+ + VY LL+ KK
Sbjct: 718 DAKVIYGDTDSVMVKFGVENVAQAMEIGLEAAKEVSKIFTPPIKLEFEKVYFPYLLINKK 777
Query: 836 KYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYS 891
+YA L +K + KM C KG++ VRRD L ++ + ++L D+QS D++
Sbjct: 778 RYAGLYFTKPEVHDKMDC----KGLETVRRDNCPLVAKVLGVCLEKLLIERDQQSALDFA 833
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
K+ +DL + ++LL I+K+LTK+ ++Y ++A HV++A R+
Sbjct: 834 ------------KRTISDLLCNKIDISLLIISKELTKSGDKYQAKQA--HVELAARMKKR 879
Query: 952 NSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ + GD + Y+ + A +RA + L+NN + +D +YL+ Q+ + R
Sbjct: 880 DAGSAPRLGDRVPYVFVAAAKNVPAYERAEDPTFVLQNN--IPLDTKHYLTNQLAKPLAR 937
Query: 1010 LLEPIEGTDAVRI 1022
+ EPI G A +I
Sbjct: 938 IFEPILGDRAEKI 950
>gi|297620193|ref|YP_003708298.1| DNA polymerase Pol2 [Methanococcus voltae A3]
gi|297379170|gb|ADI37325.1| DNA polymerase Pol2 [Methanococcus voltae A3]
Length = 879
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 234/474 (49%), Gaps = 71/474 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I + + L T S+ EFLL+ E++ + P++ + +E
Sbjct: 438 IMFSRIINQPLYDTSRMNSSQMVEFLLMKRSFEQNMISPNRPSSSSYRE----------- 486
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R K +Y+GG V EP KG + I+ +DF SLYPSI+ +NI S T L
Sbjct: 487 -RAKFSYAGGYVREPLKGIQED-IVSLDFMSLYPSILISHNI------------SPETVL 532
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMK---QPNLSSDLLMQYDIRQKALKLTAN 736
+ ++ GI+P + +L+ R+++K L+K Q N + + + QK++K+ AN
Sbjct: 533 YDEKERKNMELGIIPKTLDELLSRRKRIKKLLKDKIQKNEFDEEYNRLEHEQKSIKVLAN 592
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCN--- 793
S YG L FP +R+++ A +VT GR+ + T E ++VIY DTD +
Sbjct: 593 SHYGYLAFPMARWYSDKCAEMVTGLGRKYIQETIEKAEKFGFKVIYADTDGFYAKWDYEK 652
Query: 794 ----VNDYDSVFKIGNQ---------IKSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL 840
+ D ++ + +KS ++L + +EL+ +G +K L + KKKYA +
Sbjct: 653 AKTKIEDSGDALELSKEELIISTKKFLKSINDELPEGMELEFEGYFKRGLFITKKKYALI 712
Query: 841 SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
+G ++ IKG++VVRRDWS +A + VI +L++ D +L ++
Sbjct: 713 E----EDGHVV----IKGLEVVRRDWSNIAKNTQQAVIKALLED---GDINLAKKI---- 757
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
+KK DL G + L I QLTK EEY + PH++VA ++ ++ GD
Sbjct: 758 --IKKTIDDLKKGNIDKNDLLIHTQLTKNIEEY--KSTAPHIEVAKKIKQRGD-SVRVGD 812
Query: 961 TISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
ISYII + S + ++RA EL + +K DVNYY+ Q+ P V R++E +
Sbjct: 813 VISYIIVK--GSRSISERA----ELLDFAK-DYDVNYYIDNQVLPPVIRIMESL 859
>gi|405951999|gb|EKC19859.1| DNA polymerase delta catalytic subunit [Crassostrea gigas]
Length = 1090
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 234/485 (48%), Gaps = 64/485 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL E+ VLP + ETG+
Sbjct: 517 NYMEMARVTGV---PLPYLLSRGQQVKVVSQLLRKAKEQDLVLPTHKV--------ETGD 565
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR----- 669
Y G V+EP KGFYD I +DF+SLYPSI+ +N+C+TT+ +
Sbjct: 566 E----------YEGATVIEPVKGFYDSPIATLDFSSLYPSIMMAHNLCYTTLLSQHSIQK 615
Query: 670 --MLQDSDITTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ D I T Y + Q G+LP ++ L+ +R++ KA +K+ +D +
Sbjct: 616 EGLTPDQYIKTPSGNYFIKTQHRKGLLPEILEHLLSARKKAKADLKK---ETDPFKKKVL 672
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------N 775
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK+ VE
Sbjct: 673 DGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFGRMMIEQTKTYVEEHYTIANGYQ 732
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
+ +VIYGDTDS+M V K+G + + K K ++L+ + VY LL+ K
Sbjct: 733 HDAKVIYGDTDSVMCKFGVGTVAEAMKLGQEAADLISEKFIKPIKLEFEKVYFPYLLINK 792
Query: 835 KKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L + + KM C KG++ VRRD S L + + IL ++
Sbjct: 793 KRYAGLYWTNPEKHDKMDC----KGIETVRRDNSPLVANLINTCLQLIL---------IN 839
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
Q E+ K+ +DL + ++ L ITK+LTK +EY ++A HV++A R+ +
Sbjct: 840 RDPQGAVEYAKQAISDLLCNRIDISQLVITKELTKTGDEYAGKQA--HVELAHRMKKRDP 897
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
Q GD + Y+I AA + + I L+NN + ID YYL Q+ + R+
Sbjct: 898 GSAPQLGDRVPYVIIAGTKGSAAYMNSEDPIYVLENN--IAIDTQYYLENQLSKPLLRIF 955
Query: 1012 EPIEG 1016
EPI G
Sbjct: 956 EPILG 960
>gi|350397573|ref|XP_003484918.1| PREDICTED: DNA polymerase delta catalytic subunit-like isoform 2
[Bombus impatiens]
Length = 1104
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 243/486 (50%), Gaps = 65/486 (13%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V + L G+ + LL EK Y++P + G+ + E
Sbjct: 533 MEMARVTGVS---ICSLLTRGQQIKVVSQLLRKTREKDYLIPVHR-------GQASDEQ- 581
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRML 671
+ G V+EPK+G+Y I +DF+SLYPSII +N+C+TT+ +++
Sbjct: 582 ---------FEGATVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLKRDTEIKLK 632
Query: 672 QDSDITTLC---EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
DSD T+ + + GILP ++ L+ +R+ KA +K+ +D L Q D
Sbjct: 633 IDSDDITVTPSDSKFVKATLRKGILPEILESLLSARKAAKAELKK---ETDPLKQKVLDG 689
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-----NLNYE-- 779
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VE + Y+
Sbjct: 690 RQYALKVSANSVYGFTGAQMGKLPCLDISASVTAYGRTMIERTKQEVEEQYCVSKGYKND 749
Query: 780 --VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
V+YGDTDS+MI V + ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 750 AVVVYGDTDSVMIKFGVKTVEEAMELGREAAEYVSSKFLKPIKLEFEKVYFPYLLINKKR 809
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ KM C KG++ VRRD L + + ++L D + +D
Sbjct: 810 YAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL-----IDRNPNDA 860
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
L + K+I +DL + ++ L +TK+LTK +Y ++A HV++A ++ ++
Sbjct: 861 LN----YAKQIISDLLCNRIDISQLVVTKELTKT--DYAAKQA--HVELAAKMKKRDAGN 912
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y+ A Q+A + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 913 APKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENN--VPIDTNYYLENQLAKPLVRIFEP 970
Query: 1014 IEGTDA 1019
I G A
Sbjct: 971 ILGEKA 976
>gi|388852680|emb|CCF53598.1| probable DNA polymerase delta catalytic subunit [Ustilago hordei]
Length = 1057
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 244/490 (49%), Gaps = 68/490 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+ + L +E Y++P
Sbjct: 487 NYIEMARVTGVPFNYL---LSRGQQIKVVSQLFRKANEDKYLVP---------------- 527
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM---- 670
A KG+G + Y G VLEPK G+YD+ I +DF SLYPS++ +N+C+TT+ +
Sbjct: 528 AYKGEGTEDQ-YEGATVLEPKAGYYDRPIATLDFASLYPSVMMAHNLCYTTLLDKKTIDR 586
Query: 671 --LQDSD---ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLM 722
L+++D IT Y ++ G+LP+ ++ L+ +R++ KA +K+ P + L
Sbjct: 587 LELKENDDFVITPNNNYFATKKLRKGLLPTVLENLLAARKRAKADLKKETDPFRRAVL-- 644
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN------- 775
D RQ ALK++ANS+YG G + ++ TA GR+++ TK+ VE
Sbjct: 645 --DGRQLALKISANSVYGFTGATIGKLPCLEISMSTTAYGRQMIEQTKTYVEKHYTIANG 702
Query: 776 --LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLL 832
+ EV+YGDTDS+MI D K+G + +K + ++L+ + VY LL+
Sbjct: 703 YEHDAEVVYGDTDSVMIKFGPPDLAKAMKLGAEAAGLVSKTFIDPIKLEFEKVYFPYLLI 762
Query: 833 KKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KK+YA L ++ KM + KG++ VRRD +L + ++L
Sbjct: 763 SKKRYAGLYWTRPEKYDKM----DTKGIETVRRDNCRLVQTVIDTCLRKML--------- 809
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D ++ E+ K I +DL V ++ L ITK L K+ +Y ++A HV++A R+
Sbjct: 810 IDRDVKGAEEYAKNIISDLLQNKVDMSQLVITKALAKS--DYAAKQA--HVELAERMRKR 865
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ GD ++Y+I + AA +R+ + I L +N + ID YYL Q+ + R
Sbjct: 866 DAGSAPALGDRVAYVIVKAAKGAAAYERSEDPIYVLDHN--IPIDTRYYLENQLAKPLLR 923
Query: 1010 LLEPIEGTDA 1019
+ EPI G A
Sbjct: 924 IFEPIMGPKA 933
>gi|340623568|ref|YP_004742021.1| DNA polymerase Pol2 [Methanococcus maripaludis X1]
gi|339903836|gb|AEK19278.1| DNA polymerase Pol2 [Methanococcus maripaludis X1]
Length = 784
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 229/447 (51%), Gaps = 52/447 (11%)
Query: 579 SERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGF 638
S+ E+LLL ++ + P++ GK ++ R +++Y GG V EP KG
Sbjct: 358 SQMVEYLLLKNSYKMGVIAPNRPSGKEYQK------------RIRSSYEGGYVKEPLKGI 405
Query: 639 YDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEH--QVDTGILPSE 696
++ I+ MDF SLYPSII +N+ TI D + E L + GI+P
Sbjct: 406 HED-IVSMDFLSLYPSIIMSHNLSPETIDCTCCSDEENGENEEILGHKFCKKSIGIIPKT 464
Query: 697 IKKLVESRRQVKALMKQPNLSSDLLMQY---DIRQKALKLTANSMYGCLGFPNSRFFAQP 753
+ L+ R++VK ++++ + +Y D Q+++K+ ANS YG L FP +R++++
Sbjct: 465 LMDLINRRKKVKKVLREKAEKGEFDEEYQILDYEQRSIKVLANSHYGYLAFPMARWYSRD 524
Query: 754 LAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVF------KIGNQI 807
A + T GR+ + T EN ++VIY DTD S +D + + K +
Sbjct: 525 CAEITTHLGRQYIQKTIEEAENFGFKVIYADTDGFY-SKWADDKEKLSKDELLEKTREFL 583
Query: 808 KSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWS 867
K+ N L ++EL+ +G +K + + KKKYA + N K+ +KG++VVRRDWS
Sbjct: 584 KNINNTLPGEMELEFEGYFKRGIFVTKKKYALID----ENEKIT----VKGLEVVRRDWS 635
Query: 868 QLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLT 927
++ K V++ +L E S ++N + ++ +L +G V L I QLT
Sbjct: 636 NVSKNTQKNVLNALLKEGS---------VENAKKVIQDTIKELKDGKVNNEDLLIHTQLT 686
Query: 928 KAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKN 987
K E+Y + PHV+VA ++ + + ++ GD ISYII +++ ++RA +E KN
Sbjct: 687 KRIEDY--KTTAPHVEVAKKILKSGN-RVNVGDVISYIIT--SGNKSISERAEILENAKN 741
Query: 988 NSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
D NYY+ QI P V RL+E +
Sbjct: 742 -----YDTNYYIENQILPPVIRLMEAL 763
>gi|198429892|ref|XP_002125320.1| PREDICTED: similar to Polymerase (DNA directed), delta 1, catalytic
subunit [Ciona intestinalis]
Length = 1064
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 221/416 (53%), Gaps = 46/416 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI--------T 677
++G V++P KG+Y++ I +DF+SLYPSI+Q +N+C+TT+ + ++ D+ T
Sbjct: 541 FTGATVIDPIKGYYNQPITTLDFSSLYPSIMQAHNLCYTTLLRKNSKEKDLLGPEDFIKT 600
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALM---KQPNLSSDLLMQYDIRQKALKLT 734
+Y + V G+LP ++ L+ +R KALM K P S L D RQ ALK++
Sbjct: 601 PSGDYFVKASVRKGLLPGILESLLTARTNAKALMKVEKDPFKRSVL----DGRQLALKIS 656
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
NS+YG G + ++ VTA GR ++ TK VE + + +VIYGDT
Sbjct: 657 CNSVYGFTGAQIGKLPCLEISGSVTAFGRMMIEQTKQHVETQYTVENGYSHDAKVIYGDT 716
Query: 786 DSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ V+ +G + S +K K ++L+ + VY LL+ KK+YA L S
Sbjct: 717 DSVMVKFGVSTVAESMVLGKEAASFVSDKFVKPIKLEFEKVYYPYLLINKKRYAGLYFSS 776
Query: 845 LS--NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
S + K+ C KG++ VRRD + L + +IS L E+ D + H
Sbjct: 777 SSEVHDKIDC----KGIETVRRDNAPLTAN----LISTCL-EKLLVGRDPDGAV----AH 823
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
K++ +DL + ++ L ITK+LTK EEY ++A HV++A R+ ++ Q GD
Sbjct: 824 AKEVISDLLCNRIDISQLIITKELTKTKEEYAAKQA--HVELAERMKKRDAGSAPQLGDR 881
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+ ++I +AA ++ + I L+NN L+ID +YL Q+ + R+ EP+ G
Sbjct: 882 VPFVIVCGAKGQAAYLKSEDPIYVLENN--LQIDTEHYLKHQLTQPLLRVFEPVLG 935
>gi|170104866|ref|XP_001883646.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641281|gb|EDR05542.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1064
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 248/489 (50%), Gaps = 66/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+S + L +++ YV+P
Sbjct: 489 NYIEMARVTGVPFNYL---LSRGQSIKVLSQLFRKANDEGYVVP---------------- 529
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
+ KG+G + Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 530 SMKGEGSDEQ-YEGATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLDKATIDR 588
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLM 722
+ +++D D T + + G+LP+ ++ L+ +R++ KA +K+ P + L
Sbjct: 589 LGLVKDVDYIQTPNNDLFATTKKRKGLLPTILEDLISARKRAKADLKKETDPFKKAVL-- 646
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-------- 774
D RQ ALK++ANS+YG G + +++ VT+ GR+++ TK VE
Sbjct: 647 --DGRQLALKISANSVYGFTGATIGKLPCLAISSSVTSYGRQMIEKTKQEVEAEYCIANG 704
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLL 832
+ E+IYGDTDS+M+ ND V +G + K K ++L+ + VY LL+
Sbjct: 705 HTHDAEIIYGDTDSVMVRFGPNDLAKVMALGIEAADLVTAKFVKPIKLEFEKVYYPYLLI 764
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K+ + S KG++ VRRD +L S + + ++L +
Sbjct: 765 SKKRYAGLYWTKVDKYDKMDS---KGIETVRRDNCRLVSTVIETCLHKML---------I 812
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D +++ ++ K+ DL V ++ L ITK L+K +Y ++A H ++A R+ +
Sbjct: 813 DRDVRSAEDYTKQTIADLLQNKVDMSQLVITKALSKT--DYAGKQA--HAELAERMKQRD 868
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD ++Y+I + AA +++ + + L+NN L ID YYL Q+ + R+
Sbjct: 869 AGSAPALGDRVAYVIIKGIKGAAAYEKSEDPLYVLENN--LPIDTKYYLENQLSKPLMRI 926
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 927 FEPILGEKA 935
>gi|17559488|ref|NP_506017.1| Protein F10C2.4 [Caenorhabditis elegans]
gi|13124199|sp|P90829.1|DPOD1_CAEEL RecName: Full=DNA polymerase delta catalytic subunit
gi|3875739|emb|CAB04077.1| Protein F10C2.4 [Caenorhabditis elegans]
Length = 1081
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 248/492 (50%), Gaps = 65/492 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+ + ++L + ++ LP E
Sbjct: 501 NYIEMARVTGVPMNFL---LTKGQQIKILSMMLRRCKQNNFFLP-------------VIE 544
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PVRML 671
AN G G Y G V++P +GFY++ I +DF SLYPSI+ +N+C+TT+ P +
Sbjct: 545 ANSGDGE---GYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLLKSPQGVE 601
Query: 672 QDSDITTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL-LMQYDIRQK 729
+ I T +Y G+LP ++ ++ +R++ K MK N + M Y+ RQ
Sbjct: 602 NEDYIRTPSGQYFATKSKRRGLLPEILEDILAARKRAKNDMK--NEKDEFKRMVYNGRQL 659
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------N 777
ALK++ANS+YG G + ++ VTA GR+++ TK VE + +
Sbjct: 660 ALKISANSVYGFTGATVGKLPCLEISQSVTAFGRKMIDMTKLEVERIYKKGALDGKCPAD 719
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYMLLLKKKK 836
+VIYGDTDS+M+ V +IG E +K++ ++L+ + VY LL+ KK+
Sbjct: 720 AKVIYGDTDSVMVKFGVETVAQAMEIGLDAAKEVSKIFTPPIKLEFEKVYSPYLLINKKR 779
Query: 837 YAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYSL 892
YA L +K + KM C KG++ VRRD L ++ + ++L D+QS D++
Sbjct: 780 YAGLYFTKPDVHDKMDC----KGLETVRRDNCPLVAKVLGVCLEKLLIERDQQSALDFA- 834
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
K+ +DL + ++LL I+K+LTK+ ++Y ++A HV++A R+ +
Sbjct: 835 -----------KRTISDLLCNKIDISLLIISKELTKSGDKYQAKQA--HVELAARMKKRD 881
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ + GD + Y+ + A +RA + L+NN + +D +YL+ Q+ + R+
Sbjct: 882 AGSAPRLGDRVPYVFVAAAKNVPAYERAEDPTFVLQNN--IPLDTKHYLTNQLAKPLARI 939
Query: 1011 LEPIEGTDAVRI 1022
EPI G A +I
Sbjct: 940 FEPILGDRAEKI 951
>gi|409040940|gb|EKM50426.1| hypothetical protein PHACADRAFT_104509 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1068
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 247/492 (50%), Gaps = 69/492 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+S + L +E+ YV+P GE T E
Sbjct: 490 NYIEMARVTGVPFNYL---LSRGQSIKVLSQLFRKANEEEYVVP-------ALRGEGTDE 539
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVR 669
Y G V+EP KG+Y I +DF SLYPSI+ +N+C+TT+ R
Sbjct: 540 Q----------YEGATVIEPHKGYYKAPIATLDFASLYPSIMMAHNLCYTTLLDKGTIDR 589
Query: 670 MLQDSDI----TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ + D+ T ++ + G+LP ++ L+ +R++ KA +K+ +D +
Sbjct: 590 LGLEKDVDYIQTPNNDFFATAKRRKGLLPIILEDLISTRKRAKADLKK---ETDPFKRAV 646
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + P+++ TA GR+++ TK VE
Sbjct: 647 LDGRQLALKISANSVYGFTGATIGKLPCLPISSSTTAFGRQMIEKTKQEVEAEYCIANGH 706
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSE--CNKLYKQLELDIDGVYKYMLLL 832
+ EVIYGDTDS+M+ D ++V ++G +E K K ++L+ + VY LL+
Sbjct: 707 AHDAEVIYGDTDSVMVKFGPTDLETVMQLGASQAAEFVTQKFIKPIKLEFEKVYFPYLLI 766
Query: 833 KKKKYAALSISKLSN-GKMICSQEIKGVDV--VRRDWSQLASEAGKFVISQILDEQSYTD 889
KK+YA L ++ KM + KG++ VRRD +L S VIS L++
Sbjct: 767 SKKRYAGLYWTRPDKYDKM----DTKGIEARTVRRDNCRLVST----VISTCLNKM---- 814
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D + E+ K+I +DL V ++ L ITK L KA +Y ++A HV++A R+
Sbjct: 815 -LIDRDVDGAIEYTKQIISDLLQNKVDMSQLVITKALAKA--DYAGKQA--HVELAERMK 869
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVV 1007
++ GD ++Y+I + AA +++ + I L+NN + ID YYL Q+ +
Sbjct: 870 QRDAGSAPNVGDRVAYVIIKGAKGAAAYEKSEDPIFVLENN--MPIDTKYYLENQLSNPL 927
Query: 1008 TRLLEPIEGTDA 1019
R+ EPI G A
Sbjct: 928 MRIFEPILGEKA 939
>gi|393240523|gb|EJD48049.1| hypothetical protein AURDEDRAFT_102277 [Auricularia delicata
TFB-10046 SS5]
Length = 1067
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 248/488 (50%), Gaps = 64/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+ + L+ E Y++P
Sbjct: 494 NYTEMARVTGVPFNFL---LARGQQIKVISQLMRKAKEDGYLIP---------------- 534
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP------- 667
A KG+G Y G V++PK G+Y + I +DF+S+YPSI+ +NIC+TT+
Sbjct: 535 AMKGEGSDDQ-YEGATVIDPKTGYYKEPIATLDFSSMYPSIMMGHNICYTTMTDKQTIDR 593
Query: 668 VRMLQDSDITTLCE--YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ +++D D T + + + G+LP+ ++ L+ +R++ KA +K +D +
Sbjct: 594 LGLVKDVDYTQTPQNTFFVKPGRRKGLLPTILENLLSARKRAKADLKN---ETDPFKRAV 650
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------- 775
D RQ ALK++ANS+YG G +++ TA GR+++ TKS+VE+
Sbjct: 651 LDGRQLALKISANSVYGFPGASTGHLPCTDISSTTTAYGRQMIEKTKSVVEDHYRIVNGF 710
Query: 776 -LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLK 833
+ +V+YGDTDS+M+ +D + ++G + + K ++L+ + VY LL+
Sbjct: 711 EHDAQVVYGDTDSVMVKFGPSDLATCMRLGAEAADLVTTHFVKPVKLEFEKVYWPYLLIN 770
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L +K + + KG++ VRRD +L S V+ ++L +D
Sbjct: 771 KKRYAGLYWTKTDKYDKL---DAKGIESVRRDNCRLVSTTIDTVLHKML---------ID 818
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
++KK+ +DL + ++ L ITK L KA +Y ++A HV++A R+ ++
Sbjct: 819 QDPDGAVTYVKKVISDLLQNKIDMSQLVITKALAKA--DYAGKQA--HVELAQRMRQRDA 874
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y+I + T+ AA +++ + I L+NN + +D +YYL Q+ + R+
Sbjct: 875 GSAPNVGDRVAYVIIKARTNAAAYEKSEDPIYVLENN--IPLDTHYYLDNQLAKPLMRIF 932
Query: 1012 EPIEGTDA 1019
EP+ G+ A
Sbjct: 933 EPVLGSKA 940
>gi|449681697|ref|XP_004209898.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Hydra
magnipapillata]
Length = 1082
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 242/483 (50%), Gaps = 62/483 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL E ++LP ++ + G+E
Sbjct: 509 NYMEMARVTGV---PLSYLLTRGQQVKVVSQLLRKSKEHDFILPAQKI----EAGDE--- 558
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV-----R 669
Y G V++P KG+Y K I +DF SLYPSI+ +N+C+TT+ R
Sbjct: 559 -----------YEGATVIDPIKGYYRKPIATLDFASLYPSIMMAHNLCYTTLLSKCDLER 607
Query: 670 MLQDSDITTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
M D I T C Y + V G+LP ++ L+ +R++ K+ +K +D+ D
Sbjct: 608 MNPDEYIVTPCNHYFVKKSVRKGLLPEILENLLSARKKAKSDLKG---ETDIFKAKVLDG 664
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LN 777
RQ ALK++ANS+YG G + +++ VTA GR+++ TK LVE+ +
Sbjct: 665 RQLALKISANSVYGFTGAQVGKLPCIEISSSVTAFGRQMIERTKQLVEDKYNIKNGYKYD 724
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
+VIYGDTDS+M+ ++ ++G + + N+ ++L+ + VY LL+ KK+
Sbjct: 725 SKVIYGDTDSVMVQFGPDNVPDSMELGREAAAYVSNEFIDPIKLEFEKVYYPYLLISKKR 784
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L SK KM C KG++ VRRD S L ++ + ++L +D
Sbjct: 785 YAGLYYSKPDTFDKMDC----KGIETVRRDNSPLVAKLINTCLQKLL---------IDRD 831
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
+ + K++ +DL + ++ L ITK+LTK EEY +++A H +A ++ ++
Sbjct: 832 PEGAVVYTKQVISDLLCNRIDISELVITKELTKTEEEYGNKQA--HSALAEKMKKRDAGS 889
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y+I ++A + I L+NN + ID +YL Q+ + R+ EP
Sbjct: 890 APKLGDRVPYVIIAGVKGAKGYEKAEDPIYVLENN--VPIDTKHYLEHQLMKPLLRIFEP 947
Query: 1014 IEG 1016
I G
Sbjct: 948 ILG 950
>gi|449451191|ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
sativus]
Length = 1086
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 235/484 (48%), Gaps = 64/484 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ V+P+ ++
Sbjct: 516 NYVEMARVTGV---PISFLLSRGQSIKVLSQLLRKAKQKNLVIPNAKHA----------- 561
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
G + Y G VLE + GFY+K I +DF SLYPSI+ YN+C+ T ++
Sbjct: 562 -----GSDQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCT----LVTPE 612
Query: 675 DITTLCEYLPEH-------------QVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
D L PEH + GILP +++L+ +R++ KA +K+ +
Sbjct: 613 DACKL-NLPPEHFNKTPSGEIFVKPNLQKGILPEILEELLTARKRAKADLKEAKDPFEKA 671
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN------ 775
+ D RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LVE+
Sbjct: 672 V-LDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLG 730
Query: 776 ---LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLL 831
N EVIYGDTDS+M+ V ++ +G + + + K ++L+ + VY LL
Sbjct: 731 GYKHNAEVIYGDTDSVMVQFGVPSVEAAMVLGREAADYISGTFIKPIKLEFEKVYYPYLL 790
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
+ KK+YA L +N + KG++ VRRD L + +IL
Sbjct: 791 ISKKRYAGLF---WTNPNKFDKMDTKGIETVRRDNCLLVKNLVNECLHKIL--------- 838
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D + +++K +DL V L+LL ITK LTK ++Y + A HV++A R+
Sbjct: 839 IDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKR 896
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
++ GD + Y+I + A +R+ + + NS + ID YYL QI + R+
Sbjct: 897 DAATAPNVGDRVPYVIVKAAKGAKAYERSEDPIYVLENS-IPIDPQYYLENQISKPLLRI 955
Query: 1011 LEPI 1014
EPI
Sbjct: 956 FEPI 959
>gi|324120726|dbj|BAJ78754.1| DNA polymerase delta catalytic subunit [Tenodera aridifolia]
Length = 1030
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 233/488 (47%), Gaps = 65/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL EK YV+P
Sbjct: 459 NYMEMARVTGVS---LPSLLTRGQQIKVVSQLLRKAREKGYVIP---------------- 499
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
G G ++ Y G V+EPKKG+Y I +DF+SLYPSI+ +N+C+TT+
Sbjct: 500 -AYGGGVQEEQYEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLQSGPREK 558
Query: 668 VRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ + D I T Y V G+LP ++ L+ +R++ KA +K D Q
Sbjct: 559 LGLTPDQYIKTPASNYFVTKSVRKGLLPEILENLLAARKKAKADLKN---EKDPFKQKVL 615
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 616 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQHYNRSNGYE 675
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
+ EV+YGDTDS+M+ V + K+G + + K ++L+ + VY LL+ K
Sbjct: 676 NDAEVVYGDTDSVMVKFGVKTVEEAMKLGREAADYVSAKFTPPIKLEFEKVYFPYLLISK 735
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ KM C KG++ VRRD S L + + ++L +D
Sbjct: 736 KRYAGLYFTRPDKYDKMDC----KGIETVRRDNSPLVANMMNTCLQKLL---------ID 782
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
E+ K++ DL + ++ L ITK+LTK+ +Y ++A HV++A ++ +
Sbjct: 783 RDPNGAVEYAKQVIADLLCNRIDISQLVITKELTKS--DYAAKQA--HVELAAKMKKRDP 838
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K GD + Y+I + A +A + I L+N+ + ID +YYL Q+ + R+
Sbjct: 839 GTAPKLGDRVPYVIISAAKNTPAYMKAEDPIFALENS--VPIDSSYYLENQLSKPLLRIF 896
Query: 1012 EPIEGTDA 1019
PI G A
Sbjct: 897 TPILGEKA 904
>gi|392565561|gb|EIW58738.1| delta DNA polymerase [Trametes versicolor FP-101664 SS1]
Length = 1066
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 249/488 (51%), Gaps = 64/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+S + L ++ Y++P
Sbjct: 491 NYTEMARVTGVPFNFL---LSRGQSIKVLSQLFRKANDDGYIVP---------------- 531
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
A +G+G + Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 532 ALRGEGSDEQ-YEGATVIEPKKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLDKSTVER 590
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+++++D D T + + G+LP+ +++L+ +R++ KA +K+ +D +
Sbjct: 591 LKLVKDVDYIQTPNNDLFVKSTRRKGLLPTILEELIGARKRAKADLKK---ETDPFKRAV 647
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK++ANS+YG G + P+++ T+ GR+++ TK VE
Sbjct: 648 LDGRQLALKISANSVYGFTGATIGKLPCLPISSSTTSYGRQMIEKTKQEVEAEYCIANGH 707
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
+ + VIYGDTDS+M+ D +V ++G++ K K ++L+ + VY LL+
Sbjct: 708 SHDATVIYGDTDSVMVRFGPTDLPTVMRMGSEAADFVTAKFIKPIKLEFEKVYFPYLLIS 767
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM + KG++ VRRD +L S + + ++L +
Sbjct: 768 KKRYAGLYWTRPEKYDKM----DTKGIETVRRDNCRLVSTVIETCLHKML---------I 814
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D + +++K+ +DL V ++ L ITK L+K +Y ++A HV++A R+ +
Sbjct: 815 DRDVGGAEDYVKQTISDLLQNKVDMSQLVITKALSKT--DYASKQA--HVELAERMKKRD 870
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ GD ++Y+I + AA +++ + + NS + ID YYL Q+ + R+
Sbjct: 871 AGSAPALGDRVAYVIIKGAKGAAAYEKSEDPIFVLENS-IPIDTKYYLENQLSNPLMRIF 929
Query: 1012 EPIEGTDA 1019
EPI G A
Sbjct: 930 EPILGDKA 937
>gi|403171115|ref|XP_003330341.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169039|gb|EFP85922.2| DNA polymerase delta subunit 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1055
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 242/490 (49%), Gaps = 84/490 (17%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+ + L +E SY++P K EG +
Sbjct: 491 NYTEMARVTGVPFNYL---LSRGQQIKVVSQLYRRANEHSYLVP-----ALKHEGSD--- 539
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRM 670
Y G V+EP +GFYD I +DF SLYPSI+ +N+C+TT+ V++
Sbjct: 540 ---------EPYDGATVMEPVRGFYDVPIATLDFASLYPSIMMAHNLCYTTLTDAKTVKL 590
Query: 671 L---QDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
L QD D IT +Y + G+L ++ L+ +R++ +A +K L +D +
Sbjct: 591 LELRQDEDFIITPNGDYFVKASKRKGLLAIVLEDLLSARKRARAELK---LETDPFKRAV 647
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNY----- 778
D RQ ALK++ANS+YG G + P++ VTA GRE++ TK+ VE L Y
Sbjct: 648 LDGRQLALKISANSVYGFTGATVGKLPCLPISMSVTAFGREMIKITKNEVE-LKYTKANG 706
Query: 779 -----EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK 833
EVIYGDTDS+M+ F K K ++L+ + VY LL+
Sbjct: 707 YDDDAEVIYGDTDSVMVK---------FGCAEAADFVSAKFQKPIKLEFEKVYFPYLLIS 757
Query: 834 KKKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +KL + KM + KG++ VRRD L S + + ++L +
Sbjct: 758 KKRYAGLHWTKLEKHDKM----DAKGIETVRRDNCPLVSTVIETCLKKML---------I 804
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ + K++ +DL + L+ L ITK L KA +Y ++A HV++A R+ +
Sbjct: 805 DRDVKGAEAYTKQVISDLLQNRIDLSQLVITKALAKA--DYAAKQA--HVELAKRMKKRD 860
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPV 1006
+ GD ++Y+I + GT +A RAY E L+NN + ID YYL Q+
Sbjct: 861 AGSAPALGDRVAYVIIK-GTKDA---RAYEKSEDPLYVLENN--IPIDTKYYLDNQLSKP 914
Query: 1007 VTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 915 LMRIFEPILG 924
>gi|347522849|ref|YP_004780419.1| DNA polymerase Pol2 [Pyrolobus fumarii 1A]
gi|343459731|gb|AEM38167.1| DNA polymerase Pol2 [Pyrolobus fumarii 1A]
Length = 803
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 208/397 (52%), Gaps = 41/397 (10%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R + Y G +VLEP +G ++ I ++DF+S+YP+I+ +YN+ T+ VR ++ C
Sbjct: 413 RPEETYRGAIVLEPLRGVHEN-IAVLDFSSMYPNIMIKYNVGPDTL-VRPGEECG-ECGC 469
Query: 681 EYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
PE + G + +++L+E R++V+A MK+ S D RQKALK+ A
Sbjct: 470 WEAPEVKHRFRRCPPGFFKTVLERLLELRKRVRAEMKKYPPDSPEYRLLDERQKALKVLA 529
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
N+ YG +G+ +R++ + A VTA GR ++ ++ L +VIYGDTDSL ++ +
Sbjct: 530 NASYGYMGWSGARWYCRECAEAVTAWGRHLIRTAINIARKLGLKVIYGDTDSLFVTYDPE 589
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQ 854
+ KI I+ E E+ ++ VYK + + KK+YA L L +G++
Sbjct: 590 KVEKFIKI---IEEELG-----FEIKLEKVYKRVFFTEAKKRYAGL----LEDGRI---- 633
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
+I G + VR DW +LA E V+ +L + E+++KI +L+ G
Sbjct: 634 DIVGFEAVRGDWCELAKEVQTKVVEIVLKTSD---------VNKAVEYVRKIVKELEEGK 684
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
VP+ L I K L+K EEYT PHV A R+ + ++ GD I Y+I + G
Sbjct: 685 VPIEKLVIWKTLSKRLEEYTTEA--PHVVAAKRMLSAGY-RVSPGDKIGYVIVKGGGR-- 739
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+QRA+ +K+ S +IDV YY+ QI P R+L
Sbjct: 740 ISQRAWPYFMVKDPS--QIDVTYYVDHQIIPAALRIL 774
>gi|324120730|dbj|BAJ78756.1| DNA polymerase delta catalytic subunit [Reticulitermes speratus]
Length = 1033
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/490 (30%), Positives = 233/490 (47%), Gaps = 63/490 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL EK Y++P
Sbjct: 462 NYMEMSRVTGVS---LSSLLTRGQQIKVVSQLLRKAREKGYLMP---------------- 502
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVR 669
G G ++ Y G V+EPKKG+Y + +DF+SLYPSI+ +N+C+TT+ P R
Sbjct: 503 -AYGGGVQEEQYEGATVIEPKKGYYSDPVATLDFSSLYPSIMMAHNLCYTTLLQPGAPSR 561
Query: 670 MLQDSD---ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ D T + V G+LP ++ L+ +R++ KA +K+ D Q
Sbjct: 562 LGLSPDQYIKTPASNFFVNKSVRKGLLPEILENLLAARKKAKADLKE---EKDPFRQKVL 618
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 619 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQHYNVANGYK 678
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKK 834
+ EVIYGDTDS+M+ V + ++G + + + + L+ + VY LL+ K
Sbjct: 679 NDAEVIYGDTDSVMVKFGVKTLEEAMELGRDAANYVSTRFPPPIRLEFEKVYFPYLLISK 738
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ KM C KG++ VRRD S L + + ++L +D
Sbjct: 739 KRYAGLYFTRPDRYDKMDC----KGIETVRRDNSPLVANMMNTCLQKLL---------ID 785
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
E+ K++ +DL + ++ L ITK+L K+ +Y ++A HV++A ++ +
Sbjct: 786 RDPDGAVEYAKQVISDLLCNRIDISQLVITKELAKS--DYAAKQA--HVELAAKMKKRDP 841
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
K GD + Y+I + A +A + + NS + ID NYYL Q+ + R+
Sbjct: 842 GTAPKLGDRVPYVIIAAAKNTPAYMKAEDPIYVLENS-VPIDSNYYLENQLSKPLLRIFT 900
Query: 1013 PIEGTDAVRI 1022
PI G A I
Sbjct: 901 PILGEKAESI 910
>gi|19112916|ref|NP_596124.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe 972h-]
gi|12644199|sp|P30316.2|DPOD_SCHPO RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|6048293|emb|CAB58156.1| DNA polymerase delta catalytic subunit Cdc6 [Schizosaccharomyces
pombe]
Length = 1086
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 265/558 (47%), Gaps = 96/558 (17%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP KG+YD I +DF+SLYPSI+Q +N+C+TT+ +++ QD D +
Sbjct: 566 YEGATVIEPIKGYYDTPIATLDFSSLYPSIMQAHNLCYTTLLDSNTAELLKLKQDVDYSV 625
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKL 733
T +Y + V G+LP + L+ +R++ KA +K+ P + L D RQ ALK+
Sbjct: 626 TPNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKKETDPFKKAVL----DGRQLALKV 681
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G N R +++ VT+ GR+++ TK +VE + + VIYGD
Sbjct: 682 SANSVYGFTGATNGRLPCLAISSSVTSYGRQMIEKTKDVVEKRYRIENGYSHDAVVIYGD 741
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ V K+G + + + + ++L+ + VY LL+ KK+YA L +
Sbjct: 742 TDSVMVKFGVKTLPEAMKLGEEAANYVSDQFPNPIKLEFEKVYFPYLLISKKRYAGLFWT 801
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ + S KG++ VRRD L S + ++L +D ++
Sbjct: 802 RTDTYDKMDS---KGIETVRRDNCPLVSYVIDTALRKML---------IDQDVEGAQLFT 849
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA-LPHVQVALRLNNTNSKKLKQ-GDT 961
KK+ +DL + ++ L ITK L+K TD A + HV++A R+ ++ GD
Sbjct: 850 KKVISDLLQNKIDMSQLVITKALSK-----TDYAAKMAHVELAERMRKRDAGSAPAIGDR 904
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y+I + + R+ + I L+NN + ID YYL Q+ + R+ EPI G A
Sbjct: 905 VAYVIIKGAQGDQFYMRSEDPIYVLENN--IPIDAKYYLENQLSKPLLRIFEPILGEKA- 961
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTV 1080
+SL +I + ++ G+ +F K E TC+ CK
Sbjct: 962 ---------SSLLHGDHTRTISMAAPSVGGI-------MKFAVKVE-TCL--GCK----- 997
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC---- 1136
AP + G + + C+N + L + +N V++ W +C
Sbjct: 998 -APIK---KGKTALCENCLNRSAE---------LYQRQVAQVNDLEVRFARLWTQCQRCQ 1044
Query: 1137 ----EDPGCSDLTRRCPL 1150
+D C+ +R CP+
Sbjct: 1045 GSMHQDVICT--SRDCPI 1060
>gi|67678116|gb|AAH97928.1| Unknown (protein for IMAGE:6868894), partial [Xenopus laevis]
Length = 277
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 142/273 (52%), Gaps = 16/273 (5%)
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLY 1033
+A+QRAY E+L+ L ID YYLSQQ+HPVV R+ EPI+G D+ IA LGLD S +
Sbjct: 2 SASQRAYAQEQLQKQENLSIDTQYYLSQQVHPVVARICEPIDGIDSALIAMWLGLDPSQF 61
Query: 1034 RSQIKESIQQSEENILGVGE----AEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTH 1089
R+ QQ EEN +G +E KY+ C++F+F C P C N + S
Sbjct: 62 RAH--RHYQQDEENDALLGGPSQLTDEEKYRDCERFKFFC--PKCGTENIYDNVFDGSGL 117
Query: 1090 GVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCEDPGCSDLTRRCP 1149
+ L C PEC P Y+ + NKL D+ +YI KYY GWL CE+ C + TRR P
Sbjct: 118 QIEPGLKRCSKPECDASPLDYVIQVHNKLLLDIRRYIKKYYSGWLVCEEKTCQNRTRRLP 177
Query: 1150 LGLKTR--LCTTCHKYKLHRVYTELQLYQQLSFFHYICDITKALTKSDTPS------IKF 1201
L +C C K L Y E LY QL F+ +I D AL K + K
Sbjct: 178 LSFSRNGPICQACSKATLRSEYPEKALYTQLCFYRFIFDWDYALEKVVSEQERGHLKKKL 237
Query: 1202 DSETYMGYCKMKQHVERFLESSAYNIVDLKKLF 1234
E+ Y K+K V++ L S Y+ V+L KLF
Sbjct: 238 FQESENQYKKLKSTVDQVLSRSGYSEVNLSKLF 270
>gi|195442888|ref|XP_002069178.1| GK23632 [Drosophila willistoni]
gi|194165263|gb|EDW80164.1| GK23632 [Drosophila willistoni]
Length = 1093
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 219/420 (52%), Gaps = 47/420 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----------RMLQDSD 675
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ + ++QD
Sbjct: 567 YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLILGGSKDKLKNKGLIQDDQ 626
Query: 676 I--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKAL 731
+ T Y + ++ G+LP ++ L+ +R++ KA +K + D + D RQ AL
Sbjct: 627 VECTPANNYFVKAELRRGLLPEILESLLAARKRAKADLK---VEKDPFKRQVLDGRQLAL 683
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE----VIY 782
K++ANS+YG G + ++ VTA GR ++ TK+ VE YE VIY
Sbjct: 684 KISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEMTKTEVETHYTRSNGYENDAVVIY 743
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+M++ V + ++G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 744 GDTDSVMVNFGVKSLERSMELGREAAELVSSKFVKPIKLEFEKVYYPYLLINKKRYAGLY 803
Query: 842 ISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ + KM C KG++ VRRD S L + + ++L E++ +
Sbjct: 804 FTRPEAYDKMDC----KGIETVRRDNSPLVANLMNSCLQKLLIERN---------PEGAV 850
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQG 959
++ K++ DL + ++ L ITK+L K +Y ++A HV++A ++ + K G
Sbjct: 851 DYAKQVIADLLCNRIDISQLVITKELAKT--DYAAKQA--HVELAAKMKKRDPGTAPKLG 906
Query: 960 DTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
D + Y+IC + A Q+A + + NS + ID NYYL QQ+ + R+ EPI G A
Sbjct: 907 DRVPYVICAAAKNTPAYQKAEDPLYVLENS-VPIDANYYLEQQLSKPLLRIFEPILGEKA 965
>gi|353237606|emb|CCA69575.1| probable DNA polymerase delta catalytic subunit [Piriformospora
indica DSM 11827]
Length = 1069
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 248/493 (50%), Gaps = 67/493 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T + N L L G+S + L + + Y++P K EG E
Sbjct: 502 NYTEMARVTGIPFNYL---LSRGQSIKVVSQLYRRANSEGYLIP-----ATKSEGGED-- 551
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
Y G V+EP +GFY K I +DF+SLYPSI+ +N+C+TT+
Sbjct: 552 ----------QYEGATVIEPSRGFYKKPIATLDFSSLYPSIMMAHNLCYTTLLNKDTIDR 601
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ +++D D T ++ + G+LP+ ++ L+ +R++ KA +K+ +D +
Sbjct: 602 LGLIRDVDYIQTPNKDFFATTKRRKGLLPTVLEDLIAARKRAKADLKK---ETDPFKRAV 658
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------- 775
D RQ ALK++ANS+YG G + +++ VTA GR+++ TK++VE+
Sbjct: 659 LDGRQLALKISANSVYGFTGATIGKLPCLEISSSVTAYGRQMIERTKTVVESQFSIANGR 718
Query: 776 -LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC--NKLYKQLELDIDGVYKYMLLL 832
+ VIYGDTDS+M+ D ++ + G + + + K + L+ + VY LL+
Sbjct: 719 KWDARVIYGDTDSVMVEFGCEDLETAMECGREAAAFVTETEFVKPINLEFEKVYFPYLLI 778
Query: 833 KKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KK+YA L +K KM + KG++ VRRD +L S + + ++L
Sbjct: 779 SKKRYAGLYWTKPEKYDKM----DAKGIETVRRDNCRLVSTVIETCLQKLL--------- 825
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D ++ ++K++ +DL + ++ L ITK L+K E Y ++A H ++A R+
Sbjct: 826 IDKDVEGAESYVKRMISDLLQNKIDMSQLVITKALSK--ETYDGKQA--HDELAKRMRAR 881
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ GD + Y+I + S AA ++A + + L+NN + ID YYL Q+ + R
Sbjct: 882 DAGSAPALGDRVPYVIIKGAKSAAAYEKAEDPLYVLENN--IPIDTKYYLDNQLAKPLER 939
Query: 1010 LLEPIEGTDAVRI 1022
+ EPI G R+
Sbjct: 940 IFEPILGDKVSRL 952
>gi|3913540|sp|Q56366.1|DPOL_THES9 RecName: Full=DNA polymerase
gi|1197452|gb|AAA88769.1| DNA polymerase [Thermococcus sp. 9oN-7]
Length = 775
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 201/402 (50%), Gaps = 42/402 (10%)
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
R++ Y+GG V EP++G +D I+ +DF SLYPSII +N+ T+ ++ D+
Sbjct: 378 ARRRGGYAGGYVKEPERGLWDN-IVYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPE 436
Query: 678 ---TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALK 732
C+ P G +PS + L+E R+++K MK L LL D RQ+A+K
Sbjct: 437 VGHKFCKDFP------GFIPSLLGDLLEERQKIKRKMKATVDPLEKKLL---DYRQRAIK 487
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMIS 791
+ ANS YG G+ +R++ + A VTA GRE I + + L E ++V+Y DTD L +
Sbjct: 488 ILANSFYGYYGYAKARWYCKECAESVTAWGREYIEMVIRELEEKFGFKVLYADTDGLHAT 547
Query: 792 CNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
D ++V K + N KL LEL+ +G Y + KKKYA + GK+
Sbjct: 548 IPGADAETVKKKAKEFLKYINPKLPGLLELEYEGFYVRGFFVTKKKYAVID----EEGKI 603
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
+G+++VRRDWS++A E V+ IL ++ +K++ L
Sbjct: 604 TT----RGLEIVRRDWSEIAKETQARVLEAILKHGD---------VEEAVRIVKEVTEKL 650
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
VP L I +Q+T+ +Y + PHV VA RL K++ G ISYI+ +
Sbjct: 651 SKYEVPPEKLVIHEQITRDLRDY--KATGPHVAVAKRL-AARGVKIRPGTVISYIVLKG- 706
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
S RA +E + +K + D YY+ Q+ P V R+L+
Sbjct: 707 -SGRIGDRAIPADEF-DPTKHRYDAEYYIENQVLPAVERILK 746
>gi|154344040|ref|XP_001567964.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065298|emb|CAM40726.1| putative DNA polymerase delta catalytic subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1032
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 243/499 (48%), Gaps = 79/499 (15%)
Query: 555 NQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N +E R+T V G +L R G+ + +LL +K V+P +Y TG
Sbjct: 460 NNVEMARVTGVPVGWLLER----GQQIKVFSMLLRKAQKKKLVVPTVEY---------TG 506
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVR 669
+++G Y G V++P KGFY+ + +DF SLYPSII +N+C++T+ R
Sbjct: 507 GSDRG-------YEGATVIDPIKGFYNCPVATLDFASLYPSIIIAHNLCYSTLVRPADAR 559
Query: 670 MLQDS--DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI- 726
+ + D + + + V GILP ++ L+ +R+ +A+MK + S ++Y +
Sbjct: 560 LYPEDALDRSPTSDVFVKKDVFPGILPEVLQDLLAARKHARAMMKDVPMHS---LEYKVL 616
Query: 727 --RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--NYEVIY 782
RQ ALK++ANS+YG G + ++A VTA GR+++ TK+LVE L V+Y
Sbjct: 617 NGRQLALKVSANSVYGFTGAQVGKLPCLEISASVTAYGRQMIDKTKNLVEQLYPGTRVLY 676
Query: 783 GDTDSLMISCNVND-----------YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLL 831
GDTDS+M+ C ++ D + ++ S+ K ++L+ + VY LL
Sbjct: 677 GDTDSVMVKCVTDEKASDKERLQAAMDFGIEAAERVSSD---FLKPIKLEFEKVYFPYLL 733
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS----- 886
+ KK+YA L +N + KG++ VRRD L + V+++IL +S
Sbjct: 734 MNKKRYAGL---LWTNTDQFDKLDAKGIETVRRDNCPLVARMVSGVLNRILIHRSVESAI 790
Query: 887 -YTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVA 945
+ ++ D L N R D+ N L ITK +KA +EY +A H+ +
Sbjct: 791 DFVKGTISDLLLN--------RLDISN-------LVITKAFSKAEDEYAGAQA--HIALV 833
Query: 946 LRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQI 1003
R+ + GD ++Y+I + A +R+ + I L NN + ID YYL Q+
Sbjct: 834 ERMRQRDPASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNN--IPIDTQYYLEHQL 891
Query: 1004 HPVVTRLLEPIEGTDAVRI 1022
P + R+ E + +V I
Sbjct: 892 APPILRVFEGVLDDPSVLI 910
>gi|173384|gb|AAA35303.1| DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1086
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 265/558 (47%), Gaps = 96/558 (17%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP KG+YD I +DF+SLYPSI+Q +N+C+TT+ +++ QD D +
Sbjct: 566 YEGATVIEPIKGYYDTPIATLDFSSLYPSIMQAHNLCYTTLLDSNTAELLKLKQDVDYSV 625
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKL 733
T +Y + V G+LP + L+ +R++ KA +K+ P + L D RQ ALK+
Sbjct: 626 TPNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKKETDPFKKAVL----DGRQLALKV 681
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G N R +++ VT+ GR+++ TK +VE + + VIYGD
Sbjct: 682 SANSVYGFTGATNGRLPCLAISSSVTSYGRQMIEKTKDVVEKRYRIENGYSHDAVVIYGD 741
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ V K+G + + + + ++L+ + VY LL+ KK+YA L +
Sbjct: 742 TDSVMVKFGVKTLPEAMKLGEEAANYVSDQFPNPIKLEFEKVYFPYLLISKKRYAGLFWT 801
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ + S KG++ VRRD L S + ++L +D ++
Sbjct: 802 RTDTYDKMDS---KGIETVRRDNCPLVSYVIDTALRKML---------IDQDVEGAQLFT 849
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA-LPHVQVALRLNNTNSKKLKQ-GDT 961
KK+ +DL + ++ L ITK L+K TD A + HV++A R+ ++ GD
Sbjct: 850 KKVISDLLQNKIDMSQLVITKALSK-----TDYAAKMAHVELAERMRKRDAGSAPAIGDR 904
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y+I + + R+ + I L+NN + ID YYL Q+ + R+ EPI G A
Sbjct: 905 VAYVIIKGAQGDQFYMRSEDPIYVLENN--IPIDAKYYLENQLSKPLLRIFEPILGEKA- 961
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTV 1080
+SL +I + ++ G+ +F K E TC+ CK
Sbjct: 962 ---------SSLLHGDHTRTISMAAPSVGGI-------MKFAVKVE-TCL--GCK----- 997
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC---- 1136
AP + G + + C+N + L + +N V++ W +C
Sbjct: 998 -APIK---KGKTALCENCLNRSAE---------LYQRQVAQVNDLEVRFARLWTQCQRCQ 1044
Query: 1137 ----EDPGCSDLTRRCPL 1150
+D C+ +R CP+
Sbjct: 1045 GSMHQDVICT--SRDCPI 1060
>gi|8569297|pdb|1QHT|A Chain A, Dna Polymerase From Thermococcus Sp. 9on-7 Archaeon
Length = 775
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 201/402 (50%), Gaps = 42/402 (10%)
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
R++ Y+GG V EP++G +D I+ +DF SLYPSII +N+ T+ ++ D+
Sbjct: 378 ARRRGGYAGGYVKEPERGLWDN-IVYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPE 436
Query: 678 ---TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALK 732
C+ P G +PS + L+E R+++K MK L LL D RQ+A+K
Sbjct: 437 VGHKFCKDFP------GFIPSLLGDLLEERQKIKRKMKATVDPLEKKLL---DYRQRAIK 487
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMIS 791
+ ANS YG G+ +R++ + A VTA GRE I + + L E ++V+Y DTD L +
Sbjct: 488 ILANSFYGYYGYAKARWYCKECAESVTAWGREYIEMVIRELEEKFGFKVLYADTDGLHAT 547
Query: 792 CNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
D ++V K + N KL LEL+ +G Y + KKKYA + GK+
Sbjct: 548 IPGADAETVKKKAKEFLKYINPKLPGLLELEYEGFYVRGFFVTKKKYAVID----EEGKI 603
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
+G+++VRRDWS++A E V+ IL ++ +K++ L
Sbjct: 604 TT----RGLEIVRRDWSEIAKETQARVLEAILKHGD---------VEEAVRIVKEVTEKL 650
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
VP L I +Q+T+ +Y + PHV VA RL K++ G ISYI+ +
Sbjct: 651 SKYEVPPEKLVIHEQITRDLRDY--KATGPHVAVAKRL-AARGVKIRPGTVISYIVLKG- 706
Query: 971 TSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
S RA +E + +K + D YY+ Q+ P V R+L+
Sbjct: 707 -SGRIGDRAIPADEF-DPTKHRYDAEYYIENQVLPAVERILK 746
>gi|407396863|gb|EKF27570.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 1029
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 240/496 (48%), Gaps = 65/496 (13%)
Query: 552 VQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE 611
V N +E R+T V + L G+ + ++L K ++P +Y
Sbjct: 452 VIVNNVEMARVTGV---PIEWLLERGQQIKVFSMMLRKAKAKDLLVPAVEY--------- 499
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----- 666
G G + Y G V+EP KGFY+ I+ +DF SLYPSII +N+C++T+
Sbjct: 500 -----SGGGGDQRGYEGATVIEPLKGFYNCPIVTLDFASLYPSIIIAHNLCYSTLVRPSD 554
Query: 667 ----PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
P ML T + + ++ GILP ++ L+ +R++ K+LMK + S +
Sbjct: 555 IARYPAEMLSR---TPTGDTFVKKELFPGILPEVLQDLLAARKRAKSLMKDVPMES---L 608
Query: 723 QYDI---RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--N 777
+Y + RQ ALK++ANS+YG G + +++ VTA GR ++ TKSLVE+L
Sbjct: 609 EYKVLNGRQLALKISANSVYGFTGAQIGKLPCLEVSSSVTAYGRLMIDQTKSLVESLYPG 668
Query: 778 YEVIYGDTDSLMISCNVN---------DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
+V+YGDTDS+MI C + +Y F G + + ++L+ + VY
Sbjct: 669 VKVVYGDTDSVMIKCVTDEKGTEKERLEYAMTFGKGAA-EEVSSHFLNPIKLEFEKVYFP 727
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
LL+ KK+YA L +N + + KG++ VRRD L + V+++IL ++S
Sbjct: 728 YLLMNKKRYAGL---LWTNTERYDKLDAKGIETVRRDNCPLVASVISGVLNRILIQRS-- 782
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+ + E +K DL + ++ L ITK +KA EY +A HV + R+
Sbjct: 783 -------VDSAVEFVKGTIRDLLLNRLDISHLVITKTFSKAENEYAGAQA--HVALVERM 833
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
+ GD ++Y+I A +R+ + I L+NN + ID YYL Q+ P
Sbjct: 834 RKRDPASAPNIGDRVAYVIVRAAKGAKAYERSEDPIYVLENN--IPIDTQYYLEHQLAPP 891
Query: 1007 VTRLLEPIEGTDAVRI 1022
+ R+ E + +V I
Sbjct: 892 LLRVFEGVLDDPSVLI 907
>gi|260826580|ref|XP_002608243.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
gi|229293594|gb|EEN64253.1| hypothetical protein BRAFLDRAFT_125058 [Branchiostoma floridae]
Length = 1286
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 236/485 (48%), Gaps = 64/485 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL E+ V+P Q + ++
Sbjct: 713 NYMEMARVTGV---PLTYLLTRGQQIKVMSQLLRKAREQDLVIPAMQSSVSDEQ------ 763
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------PV 668
Y G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 764 -----------YEGATVIEPAKGYYDTPIATLDFSSLYPSIMMAHNLCYTTLLSTPSSRA 812
Query: 669 RMLQDSDITTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQY 724
+ D I T + + + G+LP ++ L+ +R++ KA +K+ P S L
Sbjct: 813 SLSPDQFIKTPSGNFFVKKTLRKGLLPEILENLLSARKKAKADLKKETDPFRKSVL---- 868
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
D RQ ALK++ANS+YG G + ++ VT+ GR ++ T+ VE
Sbjct: 869 DGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTSFGRTMIEQTRQFVEETYRIALGHK 928
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
+ +VIYGDTDS+M+ V ++G + + K ++L+ + VY LL+ K
Sbjct: 929 HDAKVIYGDTDSVMVKFGVETVAEAMELGKEAAQAVSAKFPHPVKLEFEKVYFPYLLINK 988
Query: 835 KKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ + KM C KG++ VRRD L + + ++L Y D
Sbjct: 989 KRYAGLYFTRPEIHDKMDC----KGIETVRRDNCPLVAHLINTCLQKLL---IYRDP--- 1038
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
Q +H K++ +DL V ++ L ITK+LTK +EY ++A HV++A R+ ++
Sbjct: 1039 ---QGAIDHAKQVISDLLCNRVDISQLVITKELTKEGDEYAAKQA--HVELAERMRKRDA 1093
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD + Y+I AA ++ + I L+NN + ID YYL QQ+ + R+
Sbjct: 1094 GSAPNLGDRVPYVIIAAAKGTAAYMKSEDPIYVLENN--IPIDTKYYLDQQLSKPLLRIF 1151
Query: 1012 EPIEG 1016
EPI G
Sbjct: 1152 EPILG 1156
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 15/197 (7%)
Query: 861 VVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLL 920
V+ +W +L GK+ + L +S +D Q +H K++ +DL V ++ L
Sbjct: 347 VIGCNWIELP--VGKYRLKDQL--KSLAQIEVDVDPQGAIDHAKQVISDLLCNRVDISQL 402
Query: 921 EITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRA 979
ITK+LTK +EY ++A HV++A R+ ++ GD + Y+I AA ++
Sbjct: 403 VITKELTKEGDEYAAKQA--HVELAERMRKRDAGSAPNLGDRVPYVIIAAAKGTAAYMKS 460
Query: 980 YN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIK 1038
+ I L+NN + ID YYL QQ+ + R+ EPI G ++ + S++ K
Sbjct: 461 EDPIYVLENN--IPIDTKYYLDQQLSKPLLRIFEPILGE-----SKATSVLLSIFPEPEK 513
Query: 1039 ESIQQSEENILGVGEAE 1055
+S+ Q ++ GE E
Sbjct: 514 DSVIQIANMVVRQGERE 530
>gi|262176855|gb|ACY27482.1| DNA polymerase delta [Xenopus laevis]
Length = 1108
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 234/490 (47%), Gaps = 73/490 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL ++ V+P + EG E
Sbjct: 535 NYMEMARVTGV---PLSYLLSRGQQIKVVSQLLRQAMKQDLVMP-----VVRSEGGED-- 584
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 585 -----------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTT----LLQSG 629
Query: 675 DI------------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ T + + V G+LP ++ L+ +R++ K +K+ +D
Sbjct: 630 SVEKYGLNPEDFIKTPTGDCFVKASVRKGLLPEILENLLCARKRAKTELKK---ETDPFK 686
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
Q D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 687 QKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLD 746
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYML 830
+ +VIYGDTDS+M V ++G + + + ++L+ + VY L
Sbjct: 747 NGYKADAKVIYGDTDSVMCKLGVQTVAEAMELGREAAEWVSSHFTPPIKLEFEKVYFPYL 806
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S +N KM C KG++ VRRD L + + +IL
Sbjct: 807 LINKKRYAGLYFSSSANTHDKMDC----KGIETVRRDNCPLVANLINTCLQKIL------ 856
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D EH K + +DL + ++ L ITK+LT+ +EY ++A HV++A R+
Sbjct: 857 ---IDRDPMGAVEHAKDVISDLLCNRIDISQLVITKELTRTADEYAGKQA--HVELAERM 911
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
+ GD + Y+I AA ++ + I L+NN + ID YYL QQ+
Sbjct: 912 RKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPIYVLENN--IPIDTQYYLEQQLAKP 969
Query: 1007 VTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 970 LLRIFEPILG 979
>gi|301030555|gb|ADK47977.1| type B polymerase [Thermococcus litoralis]
Length = 774
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 222/438 (50%), Gaps = 52/438 (11%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P NK + EE K R + Y GG V EP+KG ++
Sbjct: 356 EWYLLRVAYERNELAP------NKPDEEEY------KRRLRTTYLGGYVKEPEKGLWEN- 402
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEY-----LPEHQVDTGILPSEI 697
II +DF SLYPSII +N+ T+ ++ DI + Y P G +PS +
Sbjct: 403 IIYLDFRSLYPSIIVTHNVSPDTLEKEGCENYDIAPIVSYRFCKDFP------GFIPSIL 456
Query: 698 KKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAAL 757
L+ R+++K MK + M D RQ+A+KL ANS YG +G+P +R++++ A
Sbjct: 457 GDLIAMRQEIKKKMKATIDPVERKM-LDYRQRAVKLLANSYYGYMGYPKARWYSKECAES 515
Query: 758 VTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLY 815
VTA GR I + K + E ++V+Y DTD + + + + K + + N KL
Sbjct: 516 VTAWGRHYIEMTIKEIEEKFGFKVLYADTDGFYATISGEKPEIIKKKAREFLNYINSKLP 575
Query: 816 KQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGK 875
LEL+ +G Y + KK+YA + G++ +G++VVRRDWS++A E
Sbjct: 576 GLLELEYEGFYLRGFFVTKKRYAVID----EEGRITT----RGLEVVRRDWSEIAKETQA 627
Query: 876 FVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTD 935
V+ IL + S + ++++ E + K R VPL L I +Q+T+ ++Y
Sbjct: 628 KVLEAILKDGSVEKAV--EIVRDVLEKIAKYR-------VPLEKLVIHEQITRDLKDY-- 676
Query: 936 RKAL-PHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKID 994
KA+ PHV +A RL K+K G ISYI+ + S + R + E + K K D
Sbjct: 677 -KAIGPHVAIAKRL-AARGIKVKPGTIISYIVLK--GSGKISDRVILLTEY-DPEKHKYD 731
Query: 995 VNYYLSQQIHPVVTRLLE 1012
+YY+ Q+ P V R+LE
Sbjct: 732 PDYYIENQVLPAVLRILE 749
>gi|240103512|ref|YP_002959821.1| DNA-directed DNA polymerase, B family (pol) [Thermococcus
gammatolerans EJ3]
gi|239911066|gb|ACS33957.1| DNA-directed DNA polymerase, B family (pol) [Thermococcus
gammatolerans EJ3]
Length = 775
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 214/438 (48%), Gaps = 55/438 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P NK + E R++ +Y+GG V EP++G +D
Sbjct: 354 EWFLLRKAYERNELAP------NKPDERELA-------RRRESYAGGYVKEPERGLWDN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPEVGHKFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R+++K MK L LL D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 454 GDLLEERQKIKRKMKATIDPLEKKLL---DYRQRAIKILANSFYGYYGYAKARWYCKECA 510
Query: 756 ALVTAKGREILLNT-KSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GRE + T + + E ++V+Y DTD + D ++V K + N K
Sbjct: 511 ESVTAWGREYIETTIREIEEKFGFKVLYADTDGFFATIPGADAETVKKKAKEFLKYINAK 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G Y + KKKYA + GK+ +G+++VRRDWS++A E
Sbjct: 571 LPGLLELEYEGFYVRGFFVTKKKYAVID----EEGKITT----RGLEIVRRDWSEIAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ IL ++ +K++ L VP L I +Q+T+ +Y
Sbjct: 623 QARVLEAILKHGD---------VEEAVRIVKEVTEKLSKYEVPPEKLVIHEQITRDLRDY 673
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
+ PHV VA RL K++ G ISYI+ + S RA +E + +K +
Sbjct: 674 --KATGPHVAVAKRL-AAKGVKIRPGTVISYIVLKG--SGRIGDRAIPADEF-DPTKHRY 727
Query: 994 DVNYYLSQQIHPVVTRLL 1011
D YY+ Q+ P V R+L
Sbjct: 728 DAEYYIENQVLPAVERIL 745
>gi|448103715|ref|XP_004200106.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359381528|emb|CCE81987.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 219/416 (52%), Gaps = 50/416 (12%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRMLQ----DSDIT 677
Y G +V+EP +G+YD I +DF+SLYPSI+ +N+C+TT+ + L D +T
Sbjct: 559 YEGAIVIEPVRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKQTINTLNLKEDDYTLT 618
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ +K+L+ +R++ KA +K+ D+L + RQ ALK++A
Sbjct: 619 PNGDYFVKDHKRKGILPTILKELLTARKKAKADLKKETDPFKKDVL---NGRQLALKISA 675
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 676 NSVYGFTGATIGKLPCLAISSSVTAFGREMIEKTKNEVQEHYSIKNGFPFDSQVIYGDTD 735
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ ND ++ K G + + + +K ++L+ + VY LL+ KK+YA L
Sbjct: 736 SVMVRFGFNDLETCMKYGEEAANYVSTKFKDPIKLEFEKVYFPYLLINKKRYAGLY---W 792
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH-MK 904
+N + + KG++ VRRD +L VI+++L +Y L++R EH +K
Sbjct: 793 TNPQKFDKMDTKGIETVRRDNCRLVQN----VITKVL------EYILEERDVAKAEHYVK 842
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL + L+ L ITK +K +Y ++A H+++A R+ + GD ++
Sbjct: 843 QTIADLLQNRIDLSQLVITKAYSK--HDYAAKQA--HIELAERMKKRDPGSAPTLGDRVA 898
Query: 964 YIICEDGTS---EAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I +S E + Y +E L IDV YYL Q+ + R+ EPI G
Sbjct: 899 YVIINSASSKNYEKSEDPLYVLEH-----SLPIDVKYYLDNQLSNPLMRIFEPILG 949
>gi|255731752|ref|XP_002550800.1| DNA polymerase delta catalytic subunit [Candida tropicalis MYA-3404]
gi|240131809|gb|EER31368.1| DNA polymerase delta catalytic subunit [Candida tropicalis MYA-3404]
Length = 1079
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 222/417 (53%), Gaps = 42/417 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------IPVRMLQDSDITTL 679
Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT I L + D T
Sbjct: 556 YEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKKSIQAYGLTEDDYTKT 615
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + + GILP+ + +L+ +R++ KA +K+ D+L + RQ ALK++A
Sbjct: 616 PNGDYFVKSSLRQGILPTILNELLTARKKAKADLKKETDPFKKDVL---NGRQLALKISA 672
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK++V++ + +VIYGDTD
Sbjct: 673 NSVYGFTGATIGKLPCLAISSSVTAFGREMIEKTKNVVQDYYSKKNGHPYDAKVIYGDTD 732
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + + +K ++L+ + VY LL+ KK+YA L ++
Sbjct: 733 SVMVCFGYEDLETCMKLGEEAANYVSTKFKDPIKLEFEKVYFPYLLINKKRYAGLYWTR- 791
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+ + KG++ VRRD +L V+ IL+E+ D +R +K+
Sbjct: 792 --PEKFDKMDTKGIETVRRDNCRLVQNVVTKVLEFILEER---DVGKAERF------VKQ 840
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISY 964
DL V L+ L ITK +K +Y+ ++A HV++A R+ + Q GD ++Y
Sbjct: 841 TIADLLQNRVDLSQLVITKAYSK--HDYSAKQA--HVELAERMKARDPGSAPQLGDRVAY 896
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
+I + G+ + + + L+N+ L IDV YYL QQ+ + R+ PI G R
Sbjct: 897 VIIKTGSDKNYEKSEDPLYVLENS--LPIDVKYYLEQQLTKPLERIFNPILGDAKTR 951
>gi|147899700|ref|NP_001087694.1| DNA-directed DNA polymerase delta 1 [Xenopus laevis]
gi|51895814|gb|AAH81093.1| Pold protein [Xenopus laevis]
Length = 1109
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 234/490 (47%), Gaps = 73/490 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL ++ V+P + EG E
Sbjct: 536 NYMEMARVTGV---PLSYLLSRGQQIKVVSQLLRQAMKQDLVMP-----VVRSEGGED-- 585
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 586 -----------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTT----LLQSG 630
Query: 675 DI------------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ T + + V G+LP ++ L+ +R++ K +K+ +D
Sbjct: 631 SVEKYGLNPEDFIKTPTGDCFVKASVRKGLLPEILENLLCARKRAKTELKK---ETDPFK 687
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
Q D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 688 QKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLD 747
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYML 830
+ +VIYGDTDS+M V ++G + + + ++L+ + VY L
Sbjct: 748 NGYKADAKVIYGDTDSVMCKLGVQTVAEAMELGREAAEWVSSHFTPPIKLEFEKVYFPYL 807
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S +N KM C KG++ VRRD L + + +IL
Sbjct: 808 LINKKRYAGLYFSSSANTHDKMDC----KGIETVRRDNCPLVANLINTCLQKIL------ 857
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D EH K + +DL + ++ L ITK+LT+ +EY ++A HV++A R+
Sbjct: 858 ---IDRDPMGAVEHAKDVISDLLCNRIDISQLVITKELTRTADEYAGKQA--HVELAERM 912
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
+ GD + Y+I AA ++ + I L+NN + ID YYL QQ+
Sbjct: 913 RKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPIYVLENN--IPIDTQYYLEQQLAKP 970
Query: 1007 VTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 971 LLRIFEPILG 980
>gi|324120728|dbj|BAJ78755.1| DNA polymerase delta catalytic subunit [Blattella nipponica]
Length = 1039
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 236/493 (47%), Gaps = 69/493 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL EK Y++P
Sbjct: 468 NYMEMARVTGVS---LSSLLTRGQQIKVVSQLLRKAREKGYLMP---------------- 508
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
G G ++ Y G V+EPKKG+Y I +DF+SLYPSI+ +N+C+TT+
Sbjct: 509 -AYGGGVQEEQYEGATVIEPKKGYYSDPIATLDFSSLYPSIMMAHNLCYTTLLNPASRDN 567
Query: 668 VRMLQDSDITTLCE-YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ + D + T + + V G+LP ++ L+ +R++ K +K D Q
Sbjct: 568 LGLTPDKYVKTPAQNFFVNKSVRKGLLPEILENLLSARKKAKTDLKN---EKDPFRQKVL 624
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---NL----- 776
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE N+
Sbjct: 625 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRAMIEQTKQEVEQHYNMANGYQ 684
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
+ +VIYGDTDS+M+ V + ++G + + + K ++L+ + VY LL+ K
Sbjct: 685 HDAQVIYGDTDSVMVKFGVQTLEEAMELGREAANYVSEKFPPPIKLEFEKVYFPYLLINK 744
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDY 890
K+YA L ++ KM C KG++ VRRD S L + + +IL D DY
Sbjct: 745 KRYAGLYFTRPDKYDKMDC----KGIETVRRDNSPLVANMMNTCLQKILIDRDPTGAVDY 800
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+ K++ DL + ++ L ITK+L K+ +Y ++A HV++A ++
Sbjct: 801 A------------KQVIADLLCNRIDISQLVITKELAKS--DYAAKQA--HVELAAKMKK 844
Query: 951 TNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+ K GD + Y+I + A Q+A + + NS + ID YYL Q+ + R
Sbjct: 845 RDPGTAPKLGDRVPYVIISAAKNTPAYQKAEDPIYVLENS-VPIDSTYYLENQLSKPLLR 903
Query: 1010 LLEPIEGTDAVRI 1022
+ EPI G A I
Sbjct: 904 IFEPILGDKAESI 916
>gi|323454621|gb|EGB10491.1| hypothetical protein AURANDRAFT_23037 [Aureococcus anophagefferens]
Length = 1057
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 243/501 (48%), Gaps = 77/501 (15%)
Query: 549 KYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE 608
K V N +E R+T V + L L G+ + +LL + ++P+ K+ +
Sbjct: 471 KLAVLINYVEMARVTGVPLDFL---LSRGQQIKVFSMLLRRCRASNLLVPN--LAKHGND 525
Query: 609 GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV 668
G+ A + G V+EPKK FY++ I +DF SLYPSI+Q YN+C++TI
Sbjct: 526 GD-------------AKFEGATVIEPKKAFYEEPIATLDFASLYPSIMQAYNLCYSTILT 572
Query: 669 RMLQDSD------ITTLCEYLPE-----HQVDT-----GILPSEIKKLVESRRQVKALMK 712
+ QD++ T + P+ H T G+LP + L+ +R++ KA MK
Sbjct: 573 K--QDAERHFPGGADTAYQAGPQCVDGVHHFVTAKTKRGVLPQILADLLAARKRAKADMK 630
Query: 713 QPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSL 772
+ D +Q + RQ ALK++ANS+YG G + P+A+ VTA GR +L TK
Sbjct: 631 KATDPMDKAVQ-NGRQLALKISANSVYGFTGAAVGQLPCLPIASTVTAYGRTLLHRTKDF 689
Query: 773 VEN---------LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDI 822
VE+ + EV+YGDTDS+M++ D + + +E K++ ++L+
Sbjct: 690 VESTYTKENGYAADAEVVYGDTDSVMVNFGFGDVAATLPKAEVVAAEVTKIFPPPVKLEF 749
Query: 823 DGVYKYMLLLKKKKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQI 881
+ VY LL+ KK+YA L ++ ++ M C KG++ VRRD L + + +I
Sbjct: 750 EKVYFPYLLMNKKRYAGLLWTRPETHDYMDC----KGLETVRRDNCLLVRQLIDGCLRKI 805
Query: 882 LDEQ------SYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTD 935
+ E+ +Y ++ D LQN + ++LL ITK L+K +
Sbjct: 806 IIERDTNAAIAYAKRAIGDLLQNK---------------IDISLLVITKSLSKEADSKDY 850
Query: 936 RKALPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKI 993
+ H ++A R+ + GD + Y+I + A ++ + + L+NN L I
Sbjct: 851 KAKSGHAELAKRMRARDPGTAPNVGDRVPYVIVQAPKGTATYDKSEDPVYVLENN--LPI 908
Query: 994 DVNYYLSQQIHPVVTRLLEPI 1014
D +YYL Q+ +TR+ EPI
Sbjct: 909 DASYYLENQLSKPLTRIFEPI 929
>gi|324120712|dbj|BAJ78747.1| DNA polymerase delta catalytic subunit [Nomadacris japonica]
Length = 1092
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 242/491 (49%), Gaps = 65/491 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL E++Y++P
Sbjct: 522 NYMEMARVTGVS---LASLLTRGQQIKVVSQLLRKARERNYLMP---------------- 562
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
G G ++ + G V+EPKKG+Y I +DF+SLYPSI+ +N+C+TT+ + +D
Sbjct: 563 -AYGGGAQEEQFEGATVIEPKKGYYSDPIATLDFSSLYPSIMMAHNLCYTTLLQGVAKDR 621
Query: 675 --------DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
T Y V G+LP ++ L+ +R++ K +K+ +D +
Sbjct: 622 LGLSPDQYTKTPAGNYFVRQSVCKGLLPEILENLLSARKRAKEELKR---ETDPFKKKVL 678
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---NL----- 776
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE N+
Sbjct: 679 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQHYNIANGYE 738
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
+ EVIYGDTDS+M+ V ++ +G + +K K ++L+ + VY LL+ K
Sbjct: 739 HDSEVIYGDTDSVMVKFGVKSLEAAMALGREAAEYVSSKFVKPIKLEFEKVYFPYLLINK 798
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ KM C KG++ VRRD L + + ++L E+ D ++
Sbjct: 799 KRYAGLYFTQPDKYDKMDC----KGIETVRRDNCPLVANMMNTCLQKLLIERD-PDGAV- 852
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
E+ K+I +DL + ++ L ITK+LTK+ +Y ++A HV++A ++ +
Sbjct: 853 -------EYAKQIISDLLCNRIDISQLVITKELTKS--DYAAKQA--HVELAAKMKKRDP 901
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K GD + Y++ + A +A + I L+NN + ID +YYL Q+ + R+
Sbjct: 902 GTAPKLGDRVPYVLTTAAKNTPAYMKAEDPIYVLENN--IPIDSSYYLENQLSKPLLRIF 959
Query: 1012 EPIEGTDAVRI 1022
PI G A I
Sbjct: 960 APILGDKAESI 970
>gi|302663472|ref|XP_003023378.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
gi|291187372|gb|EFE42760.1| Catalytic subunit of DNA polymerase delta [Trichophyton verrucosum
HKI 0517]
Length = 1111
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 237/488 (48%), Gaps = 69/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+PD + N +
Sbjct: 533 NYTEMARVTGVPFNFLL-----ARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQ---- 583
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------- 665
Y G V+EP + +Y I +DF SLYPSIIQ +N+C+TT
Sbjct: 584 ------------QYEGATVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLSKRTV 631
Query: 666 --IPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+ ++ +D +T + +V G+L +++L+ +R++ K A+ K P + L
Sbjct: 632 EKLGLKKGEDYIVTPNDDMFCTTKVRKGLLSQILEELLTARKRAKRELAVEKDPFKKAVL 691
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G N + P+A+ T+ GR+++ TK VE
Sbjct: 692 ----NGRQLALKISANSVYGITGATNGKLPCLPIASSTTSYGRQMIEKTKDEVEARYTIS 747
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYML 830
+ +VIYGDTDS+M+ D K+G + +K K ++L+ + VY L
Sbjct: 748 NGYTHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGFVSSKFMKPIKLEFEKVYYPYL 807
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L +N + KG++ VRRD L + V+++IL
Sbjct: 808 LINKKRYAGLY---WTNPVKYDKMDTKGIETVRRDNCLLVQTVIETVLNKIL-------- 856
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + ++K I +DL V ++ L ITK LTK EEYT ++A HV++ R+
Sbjct: 857 -IDRNVSGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQA--HVELVERMRK 911
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I T +++ + I L+NN + ID YYL Q+ +T
Sbjct: 912 RDAGSAPTLGDRVAYVIVGGATGAKNYEKSEDPIYVLENN--IPIDTRYYLENQLAKPLT 969
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 970 RIFEPILG 977
>gi|410670688|ref|YP_006923059.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
gi|409169816|gb|AFV23691.1| DNA polymerase Pol2 [Methanolobus psychrophilus R15]
Length = 913
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 242/492 (49%), Gaps = 67/492 (13%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I + V G++L + GG++ + LLL + ++ V+P K + E + +
Sbjct: 394 IAVAQVSGSLLQEVVDGGQTSMVDNLLLREYGKRDRVIPPKP-----SDDEVSFRNLSSE 448
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
G K GG VLEPKKG + II+MD+ SLYP+I+ +N+C+TT+ + +
Sbjct: 449 GLK-----GGEVLEPKKGLLEN-IIIMDYKSLYPTIMMAHNLCYTTVVEKDRPKGETIKP 502
Query: 678 -TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
+ E++P +V G++P+ ++ L+ R + K M+ + + D Q ALK+ N
Sbjct: 503 PSGGEFVP-AEVFKGVMPAILENLLNRRIETKKRMRSAATEEEHRV-LDATQLALKILLN 560
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------------------- 775
S YG G+ +R ++ PLA VT+ GRE +LNT+S++
Sbjct: 561 SFYGYSGYTRARLYSLPLANAVTSFGRENILNTRSIINGTINKVILRDSKVLFTEEVDTP 620
Query: 776 ------LNYEVIYGDTDSLMISCNV-ND--YDSVFKIGNQIKSECN-KLYKQLELDIDGV 825
++ V+YGDTDS+ + C ND D +GN+I + L +EL+ + +
Sbjct: 621 KTGDRMISLSVVYGDTDSVFVQCTSKNDISLDDAGLVGNRIAGTVSASLPDPMELEFESI 680
Query: 826 YKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ 885
K LLL KK+YA + +G S ++KG++ VRRDW +L S+ V+ +L E
Sbjct: 681 AKRGLLLAKKRYAIWVFERSGDG-WKDSIKVKGMETVRRDWCELTSKTLNRVLELVLKEG 739
Query: 886 SYTDY-----SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALP 940
+ DR++NI ++K + +D+ L +T+ +K Y +++ P
Sbjct: 740 KVEAAVAHVREVVDRVRNI--DVRKDKDIIDD-------LTMTRMFSKNASRYKNKQ--P 788
Query: 941 HVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLS 1000
H+ V ++ G+ I ++I + RA + E ++ ++ + IDV+YY+
Sbjct: 789 HITVVEKIEERTGSPPAVGERIPFVII--AGKDLFVNRAEDPEYVREHN-IPIDVDYYIK 845
Query: 1001 QQIHPVVTRLLE 1012
+Q+ P V R+L+
Sbjct: 846 KQVLPPVERILD 857
>gi|378726376|gb|EHY52835.1| DNA polymerase delta subunit 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1107
Score = 169 bits (429), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 173/629 (27%), Positives = 298/629 (47%), Gaps = 100/629 (15%)
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK--YAFNLPGVP--DLS 484
YLL R++HLK ++ +S + +Q K +F S+++ + A N G DL
Sbjct: 403 YLLDRAKHLKLQK----FPYWSRLKSVVSQAKDTNFSSKQMGNRDTKATNTNGRIQLDLL 458
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK---- 540
+ ++ + + L S +H G + + + ++ G P++ +
Sbjct: 459 QLVQRDHQLRSYTLNS-----VCAHFLGEQKEDVHHTMITELFNGT-----PDSRRRLAV 508
Query: 541 -------FPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFH 591
P R+ K N E R+T V N L R ++ +F+ L
Sbjct: 509 YCLKDAYLPQRL-MDKLMCLVNYTEMARVTGVPFNYLL-----SRGQQVKFISQLFRKAL 562
Query: 592 EKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
E+ V+P+++ K+ ++ Y G V+EP +G+YD I +DF SL
Sbjct: 563 EQQLVIPNERSEKSDEQ-----------------YEGATVIEPIRGYYDVPIATLDFASL 605
Query: 652 YPSIIQEYNICFTTIPVR-------MLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVE 702
YPSIIQ +N+C+TT+ + M +D D +T + +V G+L +++L+
Sbjct: 606 YPSIIQAHNLCYTTLLTKQIIEKHNMKKDEDYILTPNGDLFATAKVRKGLLTQILEELLG 665
Query: 703 SRRQVK---ALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVT 759
+R++ K A+ K P + L + RQ ALK++ANS+YG G + P+A+ T
Sbjct: 666 ARKRAKRELAVEKDPFKKAVL----NGRQLALKISANSVYGLTGATVGKLPCLPIASSTT 721
Query: 760 AKGREILLNTKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS- 809
A GR+++ TK VE + + +VIYGDTDS+M+ D V ++G +
Sbjct: 722 AYGRQMIEKTKHEVEQKYTIANGYSHDAQVIYGDTDSVMVKFGEKDLRKVMELGQEAADF 781
Query: 810 ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQL 869
+K K ++L+ + VY LL+ KK+YA L +N + KG++ VRRD +L
Sbjct: 782 VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLY---WTNPDKYDKMDTKGIETVRRDNCRL 838
Query: 870 ASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKA 929
+ V+ +IL +D L +++K+ +L V L++L ITK L+K+
Sbjct: 839 VQVVIETVLRKIL---------IDRDLDGAQDYVKETIANLLQNKVDLSMLVITKALSKS 889
Query: 930 PEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKN 987
+YT ++A HV++A R+ ++ GD ++Y+I + G S+ + I L+N
Sbjct: 890 --DYTAKQA--HVELAERMKKRDAGSAPALGDRVAYVIVKGAGGSKNYEKSEDPIYVLEN 945
Query: 988 NSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
N + ID YYL Q+ + R+ EPI G
Sbjct: 946 N--VPIDTKYYLDNQLANPLGRIFEPILG 972
>gi|190340064|gb|AAI63875.1| Polymerase (DNA directed), delta 1, catalytic subunit [Danio rerio]
Length = 1105
Score = 169 bits (429), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 235/490 (47%), Gaps = 73/490 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL ++ V+P K EG E
Sbjct: 535 NYMEMARVTGV---PLTYLLSRGQQIKVVSQLLRQAMKQDLVMP-----VVKTEGGED-- 584
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT +LQ S
Sbjct: 585 -----------YTGATVIEPEKGYYSVPIATLDFSSLYPSIMMAHNLCYTT----LLQKS 629
Query: 675 DI------------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDL 720
I T + + V G+LP ++ L+ +R++ KA +K+ +
Sbjct: 630 QIEKLGLGPDDFIKTPTGDLFVKSSVRKGLLPEILENLLSARKRAKAELKKETDPFKKQV 689
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
L D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 690 L---DGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEQTKQLVESRYTLD 746
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYML 830
+ +VIYGDTDS+M+ V G + + + ++L+ + VY L
Sbjct: 747 NGYQADAKVIYGDTDSVMVKLGVATVQEAMNQGKEAAEWVSSHFVPPIKLEFEKVYYPYL 806
Query: 831 LLKKKKYAALSISKLS--NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + + KM C KG++ VRRD L + + IL
Sbjct: 807 LINKKRYAGLYFSSSAEHHDKMDC----KGIETVRRDNCPLVANLINTCLQNIL------ 856
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K++ +DL + ++ L ITK+LT+ +EY ++A HV++A R+
Sbjct: 857 ---IDRDPDGAVTHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQA--HVELAERM 911
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
++ GD + Y+I + AA ++ + I L+NN + ID YYL QQ+
Sbjct: 912 RKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENN--IPIDTQYYLEQQLSKP 969
Query: 1007 VTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 970 LLRIFEPILG 979
>gi|89886293|ref|NP_001034899.1| DNA polymerase delta catalytic subunit [Danio rerio]
gi|58615463|gb|AAW80296.1| DNA polymerase delta1 catalytic subunit [Danio rerio]
Length = 1105
Score = 169 bits (429), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 235/490 (47%), Gaps = 73/490 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL ++ V+P K EG E
Sbjct: 535 NYMEMARVTGV---PLTYLLSRGQQIKVVSQLLRQAMKQDLVMP-----VVKTEGGED-- 584
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT +LQ S
Sbjct: 585 -----------YTGATVIEPEKGYYSVPIATLDFSSLYPSIMMAHNLCYTT----LLQKS 629
Query: 675 DI------------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDL 720
I T + + V G+LP ++ L+ +R++ KA +K+ +
Sbjct: 630 QIEKLGLGPDDFIKTPTGDLFVKSSVRKGLLPEILENLLSARKRAKAELKKETDPFKKQV 689
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
L D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 690 L---DGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEQTKQLVESRYTLD 746
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYML 830
+ +VIYGDTDS+M+ V G + + + ++L+ + VY L
Sbjct: 747 NGYQADAKVIYGDTDSVMVKLGVATVQEAMNQGKEAAEWVSSHFVPPIKLEFEKVYYPYL 806
Query: 831 LLKKKKYAALSISKLS--NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + + KM C KG++ VRRD L + + IL
Sbjct: 807 LINKKRYAGLYFSSSAEHHDKMDC----KGIETVRRDNCPLVANLINTCLQNIL------ 856
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K++ +DL + ++ L ITK+LT+ +EY ++A HV++A R+
Sbjct: 857 ---IDRDPDGAVTHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQA--HVELAERM 911
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
++ GD + Y+I + AA ++ + I L+NN + ID YYL QQ+
Sbjct: 912 RKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENN--IPIDTQYYLEQQLSKP 969
Query: 1007 VTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 970 LLRIFEPILG 979
>gi|327300054|ref|XP_003234720.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
gi|326463614|gb|EGD89067.1| DNA polymerase subunit delta large [Trichophyton rubrum CBS 118892]
Length = 1111
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 238/488 (48%), Gaps = 69/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+PD + N +
Sbjct: 533 NYTEMARVTGVPFNFLL-----ARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQ---- 583
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------- 665
Y G V+EP + +Y I +DF SLYPSIIQ +N+C+TT
Sbjct: 584 ------------QYEGATVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLSKRTV 631
Query: 666 --IPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+ ++ +D +T + +V G+L +++L+ +R++ K A+ K P + L
Sbjct: 632 EKLGLKKGEDYIVTPNDDMFCTAKVRKGLLSQILEELLAARKRAKRELAVEKDPFKKAVL 691
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G N + P+A+ T+ GR+++ TK VE
Sbjct: 692 ----NGRQLALKISANSVYGITGATNGKLPCLPIASSTTSYGRQMIEKTKEEVEARYTIS 747
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYML 830
+ +VIYGDTDS+M+ D K+G + +K K ++L+ + VY L
Sbjct: 748 NGYTHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGFVSSKFMKPIKLEFEKVYYPYL 807
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L +N + KG++ VRRD L + V+++IL E++
Sbjct: 808 LINKKRYAGLY---WTNPVKYDKMDTKGIETVRRDNCLLVQTVIETVLNKILIERN---- 860
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+ ++K I +DL V ++ L ITK LTK EEYT ++A HV++ R+
Sbjct: 861 -----VSGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQA--HVELVERMRK 911
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I T +++ + I L+NN + ID YYL Q+ +T
Sbjct: 912 RDAGSAPTLGDRVAYVIVGGATGAKNYEKSEDPIYVLENN--IPIDTRYYLENQLAKPLT 969
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 970 RIFEPILG 977
>gi|324120748|dbj|BAJ78765.1| DNA polymerase delta catalytic subunit [Vespa analis insularis]
Length = 1105
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 239/485 (49%), Gaps = 63/485 (12%)
Query: 557 MEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEAN 616
ME R+T V L L G+ + LL EK+Y++P +
Sbjct: 534 MEMARVTGVS---LMCLLTRGQQIKVVSQLLRKMREKNYLMP----------------VH 574
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
G+G + + GG V+EPK+G+Y I +DF+SLYPSII +N+C+TT+ Q+
Sbjct: 575 TGRGSDEQ-FEGGTVIEPKRGYYSDPIATLDFSSLYPSIIMAHNLCYTTLLTSEKQNKYG 633
Query: 677 TTLCE--------YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+ E + V G+LP ++ L+ +R+ KA +K+ +D L Q D
Sbjct: 634 LKIDEVTRTPSNSLFVKSTVKKGLLPEILENLLTARKVAKAELKK---ETDPLKQKVLDG 690
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-----NLNYE-- 779
RQ ALK++ANS+YG G + ++A VTA GR ++ TK VE N Y+
Sbjct: 691 RQYALKVSANSVYGFTGAQMGKLPCLEISASVTAYGRTMIEKTKHEVEQHYCINNGYKND 750
Query: 780 --VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+M++ V + ++G + +K ++L+ + VY LL+ KK+
Sbjct: 751 AVVIYGDTDSVMVNFGVKKIEEAMELGKEAAEYVTSKFINPIKLEFEKVYFPYLLINKKR 810
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L +K KM C KG++ VRRD L ++ + ++L +D
Sbjct: 811 YAGLYFTKPDKYDKMDC----KGLETVRRDNCPLVAKMMNTCLEKLL---------IDRN 857
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
++ ++ K+I +DL + ++ L ITK+LTK +Y ++A HV++A ++ ++
Sbjct: 858 PEDAIDYAKQIISDLLCNRIDISQLIITKELTKT--DYAAKQA--HVELAAKMKKRDAGT 913
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
K GD + Y+ A Q+A + + NS + ID YYL Q+ + R+ EPI
Sbjct: 914 APKLGDRVPYVFISASKGTPAYQKAEDPIFVLENS-IPIDTTYYLENQLSKPLVRIFEPI 972
Query: 1015 EGTDA 1019
G A
Sbjct: 973 LGEKA 977
>gi|302497097|ref|XP_003010549.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae CBS
112371]
gi|291174092|gb|EFE29909.1| Catalytic subunit of DNA polymerase delta [Arthroderma benhamiae CBS
112371]
Length = 1111
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 237/488 (48%), Gaps = 69/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+PD + N +
Sbjct: 533 NYTEMARVTGVPFNFLL-----ARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQ---- 583
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------- 665
Y G V+EP + +Y I +DF SLYPSIIQ +N+C+TT
Sbjct: 584 ------------QYEGATVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLSKRTV 631
Query: 666 --IPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+ ++ +D +T + ++ G+L +++L+ +R++ K A+ K P + L
Sbjct: 632 EKLGLKKGEDYIVTPNDDMFCTAKIRKGLLSQILEELLTARKRAKRELAVEKDPFKKAVL 691
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G N + P+A+ T+ GR+++ TK VE
Sbjct: 692 ----NGRQLALKISANSVYGITGATNGKLPCLPIASSTTSYGRQMIEKTKDEVEARYTIS 747
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYML 830
+ +VIYGDTDS+M+ D K+G + +K K ++L+ + VY L
Sbjct: 748 NGYTHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGFVSSKFMKPIKLEFEKVYYPYL 807
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L +N + KG++ VRRD L + V+++IL
Sbjct: 808 LINKKRYAGLY---WTNPVKYDKMDTKGIETVRRDNCLLVQTVIETVLNKIL-------- 856
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + ++K I +DL V ++ L ITK LTK EEYT ++A HV++ R+
Sbjct: 857 -IDRNVSGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQA--HVELVERMRK 911
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I T +++ + I L+NN + ID YYL Q+ +T
Sbjct: 912 RDAGSAPTLGDRVAYVIVGGATGAKNYEKSEDPIYVLENN--IPIDTRYYLENQLAKPLT 969
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 970 RIFEPILG 977
>gi|255956273|ref|XP_002568889.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590600|emb|CAP96795.1| Pc21g18980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1112
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 217/414 (52%), Gaps = 42/414 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EPK+G+Y + +DF SLYPSIIQ +N+C+TT+ + + +D D +
Sbjct: 576 YEGATVIEPKRGYYGVPVATLDFASLYPSIIQAHNLCYTTLLNKSSVEKLNLKKDEDYIV 635
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLT 734
T + +V G+L +++L+ +R++ K K+ +D + + RQ ALK++
Sbjct: 636 TPNGDMFCTTKVRKGLLSQILEELLSARKRAK---KELATETDSFKKAVLNGRQLALKVS 692
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + P+A+ T+ GR+++ TK VE + + EVIYGDT
Sbjct: 693 ANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKQEVEARYTIANGYSHDAEVIYGDT 752
Query: 786 DSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ V + K+G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 753 DSVMVKFGVTELADAMKLGEEAADFVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLY--- 809
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG++ VRRD + + V+++IL +D + +++K
Sbjct: 810 WTNPNKHDKMDTKGIETVRRDNCLMVQNVIETVLNKIL---------IDRDIDGAQDYVK 860
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+DL + ++ L ITK L+K E+Y ++A HV++A R++ ++ GD ++
Sbjct: 861 ATISDLLQNKIDMSKLVITKALSKRKEDYAGKQA--HVELAERMHKRDAGSAPTLGDRVA 918
Query: 964 YIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y++ + T +RA + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 919 YVMIKGSTDSKGYERAEDPIFVLENN--IPIDTKYYLDNQLTNPLNRIFEPILG 970
>gi|2865230|gb|AAC38858.1| DNA polymerase alpha, partial [Stylonychia mytilus]
Length = 975
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 134/220 (60%), Gaps = 30/220 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----------YGKNKKEG 609
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ G +E
Sbjct: 755 QLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDKKPPNAKDLKRGFMGDEFEEN 814
Query: 610 EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR 669
+ G A KG RKKA Y+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R
Sbjct: 815 DTKGGAKKGGKRKKAKYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRR 874
Query: 670 MLQDSDITTLCEY----------------LPEHQVDT--GILPSEIKKLVESRRQVKALM 711
++ D + L LP+ V+ +LP+ ++ LV+ R+ VK M
Sbjct: 875 PTKNYDGSELKNQFKSADNAEGDEVEDVDLPDKNVNIKDAVLPNVLRDLVQKRKAVKDKM 934
Query: 712 KQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFA 751
K L Q +IRQKA+KLTANSMYGCLGF +SRF A
Sbjct: 935 KSEK-DQVKLQQLEIRQKAIKLTANSMYGCLGFSSSRFHA 973
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 28/284 (9%)
Query: 301 QIEAIESQSIEEKVDVTNVESVSSAVELSTSPPPQVVEKKE-----HKCAEWEAI--QTE 353
Q+ +S + VD + + SSA + + + P K + K EW I Q +
Sbjct: 231 QLSHDQSMDYQSAVDESKMSESSSAQKNAMNEGPIAFSKNQTNMSASKNDEWAQIKHQNQ 290
Query: 354 PSTSEPQVHSRTADD----SLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVK 409
+ + ++A D +LPL D +++DA E+ +++FGK+F
Sbjct: 291 QAQEFKTMEQKSAMDIQEFALPLNQDGS----LSFYWIDAHEE--NNGADLFIFGKIFQP 344
Query: 410 ENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKEPVS-------IAQVYSEFDQIATQY--K 460
E N + SC + V + R+IY LP+ + K + ++ + V E + I +
Sbjct: 345 EINQYVSCSMKVNGMQREIYALPKMQKGKARGTLTREEENQLVRGVQLELEDIRKKRFQG 404
Query: 461 ILDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLEN 520
I ++ + + +KYAF +P +L+++Y A LPS + G+TF V G S LE
Sbjct: 405 ITKWRCKPVTRKYAFEMPIQHGEHLFLKIKYDATFVPLPSTVQGNTFD-VIGLNQSMLEL 463
Query: 521 LLLERKIKGPSWLEFPEAEKFPS-RISWCKYEVQCNQMEKIRIT 563
+L+RK+KGP W+ +K + +WC+ E++ + + +T
Sbjct: 464 FILKRKLKGPCWMTIKNPKKVTDFKKTWCRQEIEIDNPKNAEVT 507
>gi|255077772|ref|XP_002502470.1| predicted protein [Micromonas sp. RCC299]
gi|226517735|gb|ACO63728.1| predicted protein [Micromonas sp. RCC299]
Length = 1147
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 252/491 (51%), Gaps = 67/491 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V LS L G+S + +L ++ ++P KK G E +
Sbjct: 568 NYIEMARVTGV---PLSFLLARGQSIKVLSQILRKAKQRGLLVPHIA----KKGGGE--Q 618
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IP---VRM 670
A+ G AY G VL+ K G+Y+ + +DF SLYPSI+ +N+C++T +P V+
Sbjct: 619 ADGG-----VAYEGATVLDAKAGYYEMPVATLDFASLYPSIMMAHNLCYSTLVPRDRVQF 673
Query: 671 LQDSDIT-TLC--EYLPEHQVDTGILPSEIKKLVESRRQVKALMK--QPNLSSDLLMQYD 725
+ D+T T C ++ H+ + GILP + +L+ +R++ KA +K Q L +L D
Sbjct: 674 MASEDVTRTPCGDTFVKSHK-EKGILPEILTELLSARKRAKADLKKAQDPLEKAVL---D 729
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NL 776
RQ ALK++ANS+YG G + +++ TA GRE++ +TK++VE
Sbjct: 730 GRQLALKVSANSVYGFTGATVGQLPCLEISSSTTAFGREMIDHTKAMVEKRYTTANGYKA 789
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKK 835
N +VIYGDTDS+MI NV + + K+G + + + K ++L+ + VY LL+ KK
Sbjct: 790 NADVIYGDTDSVMIKFNVPELEDAMKLGEEAAEYVSATFIKPIKLEFEKVYFPYLLISKK 849
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ------SYTD 889
+YA L +K + + KG++ VRRD + + + + +IL + SY
Sbjct: 850 RYAGLLWTKTEKYDYM---DTKGIETVRRDNCLMVRQVIETCLEKILIHRNPKGAISYVK 906
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
++ D L N LD ++LL ITK L++APE Y PHV++A ++
Sbjct: 907 NTISDLLMN----------KLD-----MSLLVITKSLSQAPENYAVNA--PHVELAKKMA 949
Query: 950 NTNSKKLK-QGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD ++Y++ + + + +++ + I + NN + ID ++YL + +
Sbjct: 950 VRDPVTAPVVGDRVAYVMIKGPKNAKSYEKSEDPIYAMDNN--IPIDSHHYLEHFLAKPL 1007
Query: 1008 TRLLEPIEGTD 1018
R+ EPI G +
Sbjct: 1008 LRIFEPIMGAE 1018
>gi|71412800|ref|XP_808567.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70872801|gb|EAN86716.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1029
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/496 (29%), Positives = 239/496 (48%), Gaps = 65/496 (13%)
Query: 552 VQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE 611
V N +E R+T V + L G+ + ++L K ++P +Y
Sbjct: 452 VVVNNVEMARVTGV---PIEWLLERGQQIKVFSMMLRKAKAKDLLVPAVEY--------- 499
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----- 666
G G + Y G V+EP KGFY+ I+ +DF SLYPSII +N+C++T+
Sbjct: 500 -----SGGGGDQRGYEGATVIEPLKGFYNCPIVTLDFASLYPSIIIAHNLCYSTLVRPSD 554
Query: 667 ----PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
P ML T + + ++ GILP ++ L+ +R++ K+LMK + S +
Sbjct: 555 IVRYPAEMLSR---TPTGDTFVKKELFPGILPEVLQDLLAARKRAKSLMKDVPMES---L 608
Query: 723 QYDI---RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--N 777
+Y + RQ ALK++ANS+YG G + +++ VTA GR ++ TK LVE+L
Sbjct: 609 EYKVLNGRQLALKISANSVYGFTGAQVGKLPCLEVSSSVTAYGRLMIDQTKFLVESLYPG 668
Query: 778 YEVIYGDTDSLMISCNVN---------DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
+V+YGDTDS+MI C + +Y F G + + ++L+ + VY
Sbjct: 669 VKVVYGDTDSVMIKCLTDEKGTEKERLEYAMTFGKGAA-EEVSSHFLNPIKLEFEKVYFP 727
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
LL+ KK+YA L +N + + KG++ VRRD L + V+++IL ++S
Sbjct: 728 YLLMNKKRYAGL---LWTNTERYDKLDAKGIETVRRDNCPLVASVISGVLNRILIQRS-- 782
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+ + E +K DL + ++ L ITK +KA EY +A HV + R+
Sbjct: 783 -------VDSAVEFVKGTIRDLLLNRLDISHLVITKTFSKAENEYAGAQA--HVALVERM 833
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
+ GD ++Y+I A +R+ + I L+NN + ID YYL Q+ P
Sbjct: 834 RKRDPASAPNIGDRVAYVIVRAAKGAKAYERSEDPIYVLENN--IPIDTQYYLEHQLAPP 891
Query: 1007 VTRLLEPIEGTDAVRI 1022
+ R+ E + +V I
Sbjct: 892 LLRVFEGVLDDPSVLI 907
>gi|2865224|gb|AAC38855.1| DNA polymerase alpha, partial [Pleurotricha lanceolata]
Length = 990
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 126/207 (60%), Gaps = 28/207 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK--------EGEET 612
++TN+ GN+ R+L R+ERNE LLLH F +K ++LPDK+ K E EE
Sbjct: 782 QLTNIAGNMWFRSLRNARAERNEMLLLHEFKKKKFLLPDKKQPTAKDLKRNPFADEFEEM 841
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ 672
+ KG RKKAAY+GGLV+EPK GFYD I+L+DFNSLYPSIIQEYN+CFTT+ R +
Sbjct: 842 EKDQKGGKRKKAAYAGGLVIEPKAGFYDNIILLLDFNSLYPSIIQEYNLCFTTVNRRPTK 901
Query: 673 DSDITTLCEY-----------------LPEHQVDT--GILPSEIKKLVESRRQVKALMKQ 713
+ D + L LP+ V+T +LP+ ++ LV+ RR VK MK
Sbjct: 902 NFDGSELKSQFKKVNEQGEEEEVEEADLPDKNVNTKDAVLPNVLRDLVQKRRAVKDKMKT 961
Query: 714 PNLSSDLLMQYDIRQKALKLTANSMYG 740
L Q +IRQKA+KLTANSMYG
Sbjct: 962 EK-DQVKLSQLEIRQKAIKLTANSMYG 987
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 23/210 (10%)
Query: 367 DDSLPLATDHENKKVFRMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDR 426
D LPL D +++DA E+ +Y+FGK++ E + SC + V + R
Sbjct: 334 DYDLPLNQDG----TLSFYWIDAHEE--NNGADLYIFGKIYQHEERQYVSCSIKVNGMQR 387
Query: 427 KIYLLPRSE-----HLKTKEPVSIAQ-VYSEFDQIATQY--KILDFKSRKIEKKYAFNLP 478
+++ LP+ + L T+E ++ + E D I + I ++ +++ +KYAF +P
Sbjct: 388 ELFALPKMKGKARGALTTEEQKEQSRAMIMELDDIRKKRFPNITKWRCKQVNRKYAFEMP 447
Query: 479 GVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEA 538
++LE++Y A P+LPS + G+TF +FG S LE +L+RKIKGP W+
Sbjct: 448 IQHGEHQFLEIKYDATMPSLPSTVQGNTFECIFGCNQSILELFILKRKIKGPCWMTI--- 504
Query: 539 EKFPSRI-----SWCKYEVQCNQMEKIRIT 563
K P ++ +WC+ EV N + I +T
Sbjct: 505 -KNPKKVIDYGKTWCRQEVIVNNPKDIEVT 533
>gi|352683087|ref|YP_004893611.1| DNA polymerase II [Thermoproteus tenax Kra 1]
gi|350275886|emb|CCC82533.1| DNA polymerase II [Thermoproteus tenax Kra 1]
Length = 785
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 230/472 (48%), Gaps = 68/472 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E+LL+ + V P N++E
Sbjct: 354 IQLSSVSGIPLDQVAAASVGARVEWLLMRYAYRAGEVAP------NREE----------- 396
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ--DSDIT 677
R Y G +VLEP+ G Y +L DF S+YPSII YN+ P L+ + D
Sbjct: 397 -RPYEPYKGAIVLEPRPGIYSDVAVL-DFTSMYPSIIMRYNLS----PDTYLEPGEPDPP 450
Query: 678 TLCEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
PE + TG +P + LV+ RR+V+ M + + +S D RQ+ALK
Sbjct: 451 EGVHVAPEVGHRFRRAPTGFIPQVLSSLVKLRREVRGAMLRIDPNSVEYKLLDERQRALK 510
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
+ AN+MYG +G+ +R++ + +A VTA R ILL+ L +VIYGDTDSL I
Sbjct: 511 IMANAMYGYMGWIGARWYKREVAESVTAYARSILLDVIKYARALGLDVIYGDTDSLFIKN 570
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMI 851
N I +I NK Y ++E+ ++ +Y+ +L + KK+YA L L +G++
Sbjct: 571 N--------PIIEKIIDYVNKKY-EIEIKLEKIYRKILFTESKKRYAGL----LDDGRI- 616
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY--SLDDRLQNIHEHMKKIRTD 909
+I G +VVR DW +LA E VI IL Q + ++ + ++ I E++K+ + +
Sbjct: 617 ---DIVGFEVVRGDWCELAKEVQLNVIEYILKSQDIKEAKSNVINYVKTIIENLKEYKVN 673
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
+D+ L I K L K EY + PH+ A +L + ++ +G TI Y+I
Sbjct: 674 IDD-------LIIWKTLDKDLNEY--KVMTPHLYAA-KLLEKSGFRVHKGMTIGYVIIRG 723
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
G + Y L N+ K +ID++YY+ +QI P R I G VR
Sbjct: 724 GDKITYKAKPYI---LINDLK-EIDIDYYIEKQIIPAALR----IAGVVGVR 767
>gi|328855214|gb|EGG04342.1| hypothetical protein MELLADRAFT_53062 [Melampsora larici-populina
98AG31]
Length = 1067
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 245/493 (49%), Gaps = 74/493 (15%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+ + L E SY++P +Y EG +
Sbjct: 492 NYTEMARVTGVPFNYL---LSRGQQIKVVSQLYRRAGEFSYIVPAMKY-----EGSDD-- 541
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP------- 667
+ G +V++P +G+YD I +DF SLYPSI+ +N+C+TT+
Sbjct: 542 ----------QFDGAIVMDPIRGYYDVPIATLDFASLYPSIMMAHNLCYTTLTDAKTAKQ 591
Query: 668 VRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ ++++ D IT +Y + G+L ++ L+ +R++ +A +K L +D +
Sbjct: 592 LGLVENEDYIITPNGDYFVKTSKRKGLLAIVLEDLLSARKRARAELK---LETDPFKKAV 648
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------- 776
D RQ ALK++ANS+YG G + P+ VTA GRE++ TK+ VE
Sbjct: 649 LDGRQLALKVSANSVYGFTGATVGKLPCLPIPMSVTAFGREMIKTTKAEVEATYTKANGY 708
Query: 777 --NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
+ +VIYGDTDS+M+ D + ++G + + K K ++L+ + VY LL+
Sbjct: 709 EHDAQVIYGDTDSVMVRFGCKDLATSMRLGAEAADLVSTKFVKPIKLEFEKVYFPYLLIS 768
Query: 834 KKKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K + KM + KG++ VRRD +L + + ++L +
Sbjct: 769 KKRYAGLYWTKPEKHDKM----DAKGIETVRRDNCRLVQTVIETCLKKML---------I 815
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D +Q ++ K++ DL V L+ L ITK L K+ +Y ++A HV++A R+ +
Sbjct: 816 DRDVQGAEDYTKQVIADLLQNKVDLSQLVITKALAKS--DYAAKQA--HVELAKRMKKRD 871
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPV 1006
+ GD ++Y+I + G +A RAY E L+NN L ID YYL Q+
Sbjct: 872 AGSAPALGDRVAYVIIK-GPKDA---RAYEKSEDPLYVLENN--LPIDTKYYLENQLSKP 925
Query: 1007 VTRLLEPIEGTDA 1019
+ R+ EPI G A
Sbjct: 926 LMRIFEPILGEKA 938
>gi|298675626|ref|YP_003727376.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
gi|298288614|gb|ADI74580.1| DNA polymerase Pol2 [Methanohalobium evestigatum Z-7303]
Length = 913
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 245/505 (48%), Gaps = 74/505 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I ++ V G+VL + GG+S E LL F ++ V+P K N+ + E GE KG
Sbjct: 388 IALSQVSGSVLQDVVDGGQSSMVENLLFREFGKQGRVIPPKP--DNRPDDNEQGEEIKG- 444
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
G VLEPKKG D +IL D+ SLYP+I+ +N+C+TT+ V + +
Sbjct: 445 ---------GEVLEPKKGLLDNVVIL-DYKSLYPTIMMAHNLCYTTVVVNDHPNGETINP 494
Query: 678 -TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
+ E++ V GI+PS ++ L+ R +VK MK + D YD Q ALK+ N
Sbjct: 495 PSGGEFV-NPDVLKGIVPSILETLLNQRSEVKKKMKSIS-DGDTYRMYDATQLALKILLN 552
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------------------- 775
S YG G+ +R ++ LA VT+ GRE + NT+ L+ N
Sbjct: 553 SFYGYSGYARARLYSLTLANAVTSYGRENIQNTRDLINNNIRKVVLKDNQAYLPDEISPE 612
Query: 776 ------LNYEVIYGDTDSLMISCNVNDYDSVFK------IGNQIKSECNK-LYKQLELDI 822
+N V+YGDTDS+ I C+ +Y++ +G +I + ++ L +EL+
Sbjct: 613 DESEDVINLSVVYGDTDSVFIHCS-PEYNNDISLEDAECVGTRIAEKVSQSLPDPMELEF 671
Query: 823 DGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL 882
+ + K L L KK+Y AL + + N + S ++KG++ VRRDW +L S+ V+ +L
Sbjct: 672 ESIAKRGLFLAKKRY-ALWVFEQENDEWEDSIKVKGMETVRRDWCELTSKTLNRVLELVL 730
Query: 883 ---DEQSYTDY--SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRK 937
D +Y S+ +R++NI K D ++T + ++ + +
Sbjct: 731 KEGDVDKAVEYVKSVVNRVRNIDVQKDKDVID-----------DLTMTRLYSKKKDSYKS 779
Query: 938 ALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNY 997
PH+ V + G+ + ++I ++ RA + E ++ N+ L +DV+Y
Sbjct: 780 KQPHLTVIEKTKKRTGISPPIGERVPFVIV--AGNDLFVNRAEDPEYVRENN-LTLDVDY 836
Query: 998 YLSQQIHPVVTRLLEPIEGTDAVRI 1022
Y+ +QI P V R+L + G D+ +
Sbjct: 837 YIKKQILPPVERILG-VFGVDSATL 860
>gi|50543418|ref|XP_499875.1| YALI0A08426p [Yarrowia lipolytica]
gi|49645740|emb|CAG83802.1| YALI0A08426p [Yarrowia lipolytica CLIB122]
Length = 1072
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 222/423 (52%), Gaps = 44/423 (10%)
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IP 667
K G + Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT +
Sbjct: 540 KQDGSSEEQYEGATVIEPERGYYDIPIATLDFSSLYPSIMMAHNLCYTTLLDKATVERLD 599
Query: 668 VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQY 724
+++ +D T + + GILP +++L+ +R++ KA +K+ P + L
Sbjct: 600 LKLDEDYHRTPNGDLFVNQKTRKGILPIVLEELLSARKKAKADLKKETDPFKKAVL---- 655
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
D RQ ALK++ANS+YG G + +++ VTA GR+++ TK VEN
Sbjct: 656 DGRQLALKISANSVYGFTGATVGKLPCLAISSSVTAYGRDMIQFTKEQVENKYTKANGYP 715
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKK 834
N +VIYGDTDS+M+ V D + +G + ++++ K ++L+ + VY LL+ K
Sbjct: 716 ENAKVIYGDTDSVMVKFGVPDLKTAMDMGLEAAEYVSEMFLKPIKLEFEKVYFPYLLINK 775
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L +N + + KG++ VRRD +L + V+ +IL +D
Sbjct: 776 KRYAGLY---WTNPEKFDKMDTKGIETVRRDNCRLVQNVIETVLRKIL---------MDR 823
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
++ ++K + +L V L+ L ITKQL++ ++Y ++A HV++A R+ ++
Sbjct: 824 DVEGAQAYVKTMVANLLQNKVDLSQLVITKQLSR--QDYAAKQA--HVELAERMRKRDAG 879
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
GD ++Y+I + +++ + + N+ + ID YYL Q+ + R+ +P
Sbjct: 880 SAPALGDRVAYVIIKGAVGGKNYEKSEDPSYVLENN-IPIDTKYYLENQLQKPLQRIFDP 938
Query: 1014 IEG 1016
I G
Sbjct: 939 ILG 941
>gi|348533053|ref|XP_003454020.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oreochromis
niloticus]
Length = 1105
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 152/491 (30%), Positives = 240/491 (48%), Gaps = 75/491 (15%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL ++ V+P K EG E
Sbjct: 535 NYMEMARVTGV---PLTYLLSRGQQIKVVSQLLRQAMKQDLVMP-----VVKTEGGED-- 584
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 585 -----------YTGATVIEPEKGYYSLPIATLDFSSLYPSIMMAHNLCYTT----LLQKG 629
Query: 675 DITTLCEYLPEHQVDT-------------GILPSEIKKLVESRRQVKALMKQPN--LSSD 719
+ L PE + T G+LP ++ L+ +R++ KA +K+
Sbjct: 630 SVDKL-GLAPEDFIKTPTGDLFVKSSLRKGLLPEILENLLSARKRAKAELKKETDPFKKQ 688
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---- 775
+L D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 689 VL---DGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEQTKQLVESKYTL 745
Query: 776 -----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYM 829
+ +VIYGDTDS+M+ V IG + + + ++L+ + VY
Sbjct: 746 SNGYQADAKVIYGDTDSVMVKLGVATVKEAMDIGREAAEWVSSHFTPPIKLEFEKVYYPY 805
Query: 830 LLLKKKKYAAL--SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY 887
LL+ KK+YA L S S ++ KM C KG++ VRRD L + + +IL
Sbjct: 806 LLINKKRYAGLYFSSSASTHDKMDC----KGIETVRRDNCPLVANLINTCLQKIL----- 856
Query: 888 TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR 947
+D Q EH K++ +DL + ++ L ITK+LT+ +EY ++A HV++A R
Sbjct: 857 ----IDRDPQGAVEHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQA--HVELAER 910
Query: 948 LNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHP 1005
+ ++ GD + Y+I + AA ++ + I L+NN + ID YYL QQ+
Sbjct: 911 MRKRDAGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENN--IPIDTQYYLEQQLSK 968
Query: 1006 VVTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 969 PLLRIFEPILG 979
>gi|126459662|ref|YP_001055940.1| DNA polymerase II [Pyrobaculum calidifontis JCM 11548]
gi|126249383|gb|ABO08474.1| replicative DNA polymerase I [Pyrobaculum calidifontis JCM 11548]
Length = 783
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 233/482 (48%), Gaps = 76/482 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E++LL + V P N++E
Sbjct: 352 IQLSSVSGLPLDQVAAASVGNRVEWMLLRYAYRMGEVAP------NREE----------- 394
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQDSDIT 677
R+ Y G +VLEPK G Y ++L DF+S+YP+I+ +YN+ T P + D
Sbjct: 395 -REYEPYKGAIVLEPKPGLYSDVLVL-DFSSMYPNIMMKYNLSPDTYLEP----HEPDPP 448
Query: 678 TLCEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
PE + TG +P+ +K LVE RR V+ K+ S D RQ+ALK
Sbjct: 449 EGVVVAPEVGHRFRKAPTGFIPAVLKHLVELRRAVREEAKKYPPDSPEYRLLDERQRALK 508
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
+ AN+MYG LG+ +R++ + +A VTA R ILL+ + L EVIYGDTDSL +
Sbjct: 509 VMANAMYGYLGWVGARWYKKEVAESVTAFARAILLDVVEYAKRLGIEVIYGDTDSLFVKK 568
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMI 851
+ +V ++ ++ +E+ +D Y+ +L + KK+YA L L +G++
Sbjct: 569 S----GAVDRLVKYVEERHG-----IEIKVDKDYERVLFTEAKKRYAGL----LRDGRI- 614
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY--SLDDRLQNIHEHMKKIRTD 909
+I G +VVR DW +LA E V+ IL +S + + ++ + E +K + D
Sbjct: 615 ---DIVGFEVVRGDWCELAKEVQLNVVELILKSKSVGEARERVVKYVREVVERLKAYKFD 671
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
LD+ L I K L K +EY + PHV AL L K+ +G T+ Y+I
Sbjct: 672 LDD-------LIIWKTLDKELDEY--KAYGPHVHAALELKR-RGYKVGKGTTVGYVIVR- 720
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
++RA + + S K+DV+YY+ +Q+ P A+RIAE LG+
Sbjct: 721 -GPGKVSERAMPYIFVDDAS--KVDVDYYIEKQVIPA------------ALRIAEVLGVK 765
Query: 1030 TS 1031
S
Sbjct: 766 ES 767
>gi|407862999|gb|EKG07818.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma cruzi]
Length = 1029
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 217/430 (50%), Gaps = 48/430 (11%)
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---------PV 668
G G + Y G V+EP KGFY+ I+ +DF SLYPSII +N+C++T+ P
Sbjct: 501 GGGGDQRGYEGATVIEPLKGFYNCPIVTLDFASLYPSIIIAHNLCYSTLVRPSDIVRYPA 560
Query: 669 RMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI-- 726
ML T + + ++ GILP ++ L+ +R++ K+LMK + S ++Y +
Sbjct: 561 EMLSR---TPTGDTFVKKELFPGILPEVLQDLLAARKRAKSLMKDVPMES---LEYKVLN 614
Query: 727 -RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--NYEVIYG 783
RQ ALK++ANS+YG G + +++ VTA GR ++ TK LVE+L +V+YG
Sbjct: 615 GRQLALKISANSVYGFTGAQVGKLPCLEVSSSVTAYGRLMIDQTKFLVESLYPGVKVVYG 674
Query: 784 DTDSLMISCNVN---------DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKK 834
DTDS+MI C + +Y F G + + ++L+ + VY LL+ K
Sbjct: 675 DTDSVMIKCLTDEKGTEKERLEYAMTFGKGAA-EEVSSHFLNPIKLEFEKVYFPYLLMNK 733
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L +N + + KG++ VRRD L + V+++IL ++S
Sbjct: 734 KRYAGL---LWTNTERYDKLDAKGIETVRRDNCPLVASVISGVLNRILIQRS-------- 782
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ + E +K DL + ++ L ITK +KA EY +A HV + R+ +
Sbjct: 783 -VDSAVEFVKGTIRDLLLNRLDISHLVITKTFSKAENEYAGAQA--HVALVERMRKRDPA 839
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD ++Y+I A +R+ + I L+NN + ID YYL Q+ P + R+ E
Sbjct: 840 SAPNIGDRVAYVIVRAAKGAKAYERSEDPIYVLENN--IPIDTQYYLEHQLAPPLLRVFE 897
Query: 1013 PIEGTDAVRI 1022
+ +V I
Sbjct: 898 GVLDDPSVLI 907
>gi|448099944|ref|XP_004199250.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
gi|359380672|emb|CCE82913.1| Piso0_002676 [Millerozyma farinosa CBS 7064]
Length = 1079
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 218/416 (52%), Gaps = 50/416 (12%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRMLQ----DSDIT 677
Y G +V+EP +G+YD I +DF+SLYPSI+ +N+C+TT+ + L D +T
Sbjct: 559 YEGAIVIEPVRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKQTINALNLKEDDYTLT 618
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y GILP+ +K+L+ +R++ +A +K+ D+L + RQ ALK++A
Sbjct: 619 PNGDYFIRDHKRKGILPTILKELLTARKKARADLKKETDPFKKDVL---NGRQLALKISA 675
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 676 NSVYGFTGATIGKLPCLAISSSVTAFGREMIEKTKNEVQEHYSIKNGFPFDSQVIYGDTD 735
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ ND ++ K G + S + +K ++L+ + VY LL+ KK+YA L
Sbjct: 736 SVMVRFGFNDLETCMKYGEEAASYVSTKFKDPIKLEFEKVYFPYLLINKKRYAGLY---W 792
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH-MK 904
++ + + KG++ VRRD +L VI+++L +Y L++R EH +K
Sbjct: 793 TSPQKFDKMDTKGIETVRRDNCRLVQN----VITKVL------EYILEERDVAKAEHYVK 842
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL + L+ L ITK +K +Y ++A H+++A R+ + GD ++
Sbjct: 843 QTIADLLQNRIDLSQLVITKAYSK--HDYAAKQA--HIELAERMKKRDPGSAPTLGDRVA 898
Query: 964 YIICEDGTS---EAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I +S E + Y +E L IDV YYL Q+ + R+ EPI G
Sbjct: 899 YVIINSASSKNYEKSEDPLYVLEH-----SLPIDVKYYLDNQLSNPLMRIFEPILG 949
>gi|254587977|ref|NP_035261.3| DNA polymerase delta catalytic subunit [Mus musculus]
gi|341940458|sp|P52431.2|DPOD1_MOUSE RecName: Full=DNA polymerase delta catalytic subunit
gi|74139374|dbj|BAE40829.1| unnamed protein product [Mus musculus]
gi|74195649|dbj|BAE39632.1| unnamed protein product [Mus musculus]
gi|74223279|dbj|BAE40772.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 526 VLVNNVEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGS 576
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 623
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 624 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 680
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 681 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 740
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 741 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ KM C KG++ VRRD L + + +IL
Sbjct: 801 LISKKRYAGLLFSSRSDAHDKMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 850
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 851 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 905
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 906 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 964
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 965 LRIFEPILG 973
>gi|26353290|dbj|BAC40275.1| unnamed protein product [Mus musculus]
Length = 1105
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 526 VLVNNVEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 576
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 623
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 624 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 680
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 681 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 740
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 741 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ KM C KG++ VRRD L + + +IL
Sbjct: 801 LISKKRYAGLLFSSRSDAHDKMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 850
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 851 ---MDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 905
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 906 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 964
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 965 LRIFEPILG 973
>gi|3122029|sp|P97283.1|DPOD1_MESAU RecName: Full=DNA polymerase delta catalytic subunit
gi|1840089|gb|AAB47254.1| DNA polymerase delta catalytic subunit [Mesocricetus auratus]
Length = 1103
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 524 VLVNNVEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 574
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 575 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 621
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 622 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 678
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 679 RQVLDGRQLALKVSANSVYGFTGAEVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLE 738
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
N N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 739 NGYNANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 798
Query: 831 LLKKKKYAALSISKL--SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S ++ +M C KG++ VRRD L + + +IL
Sbjct: 799 LISKKRYAGLLFSSQPDTHDRMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 848
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 849 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 903
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 904 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLGQQLAKPL 962
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 963 LRIFEPILG 971
>gi|438134|emb|CAA79895.1| DNA-directed DNA polymerase [Mus musculus]
Length = 1105
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 526 VLVNNVEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 576
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 623
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 624 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 680
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 681 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 740
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 741 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ KM C KG++ VRRD L + + +IL
Sbjct: 801 LISKKRYAGLLFSSRSDAHDKMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 850
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 851 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 905
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 906 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 964
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 965 LRIFEPILG 973
>gi|288931848|ref|YP_003435908.1| DNA polymerase Pol2 [Ferroglobus placidus DSM 10642]
gi|288894096|gb|ADC65633.1| DNA polymerase Pol2 [Ferroglobus placidus DSM 10642]
Length = 785
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 214/433 (49%), Gaps = 68/433 (15%)
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
E + GE + +Y G VLEP +G + K ++ +DF S+YPSI+ YNI T
Sbjct: 372 EAYKIGEIAPNPAEVEESYEGAFVLEPSRGLH-KNVVCLDFASMYPSIMIAYNISPDTYV 430
Query: 668 VRMLQDSDITTLCEYLPE--HQVDT---GILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
D C PE H+ G +K L+E RR++K MK + +S +
Sbjct: 431 FGKCDD------CYVAPEVGHKFRKHPDGFFKRILKMLIEKRREIKNQMKSLDRNSREYL 484
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIY 782
+I+Q+ LK+ NS YG G+ +R++ + A TA GR ++ + + + L +EV+Y
Sbjct: 485 LLNIKQQTLKILTNSFYGYTGWSGARWYCRQCAEATTAWGRHLIKSAVEIAKKLGFEVLY 544
Query: 783 GDTDSLMISCNVNDYDSVFKIGN----QIKSECNKLYKQL------ELDIDGVYKYMLLL 832
GDTDS+ + K GN +I+ E KL +++ ++++D YK + +
Sbjct: 545 GDTDSIFV-----------KKGNLSLEKIRGEVEKLIEEISEKFPVQIEVDEYYKTIFFV 593
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
+KK+YA L+ +G ++ +KG++V R DW +LA E K VI IL E++
Sbjct: 594 EKKRYAGLT----EDGILV----VKGLEVRRGDWCELAKEVQKKVIEIILKEEN------ 639
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
+ E+++K+ D+ +G V L + I K LTK P++Y ++A HV+ ALR
Sbjct: 640 ---PEKAAEYVRKVINDIKSGKVKLEDVVIYKGLTKRPDKYESKQA--HVKAALRAMELG 694
Query: 953 SKKLKQGDTISYIICEDGTSEAATQRAYN---IEELKNNSKL----------KIDVNYYL 999
G + +++ E + RAY IEE + + K+D +YY+
Sbjct: 695 I-VYNVGSKVGFVVVEGAGN--VGDRAYPIDLIEEFDGENLVIRTRSGSIVKKLDKDYYI 751
Query: 1000 SQQIHPVVTRLLE 1012
+ QI P V R+LE
Sbjct: 752 NHQIIPSVLRILE 764
>gi|6015025|sp|P56689.1|DPOL_THEGO RecName: Full=DNA polymerase; AltName: Full=TO POL
gi|4699806|pdb|1TGO|A Chain A, Thermostable B Type Dna Polymerase From Thermococcus
Gorgonarius
Length = 773
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 215/438 (49%), Gaps = 55/438 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P NK + E R++ +Y+GG V EP++G ++
Sbjct: 354 EWFLLRKAYERNELAP------NKPDERELA-------RRRESYAGGYVKEPERGLWEN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDFRSLYPSIIITHNVSPDTLNREGCEEYDVAPQVGHKFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R++VK MK + LL D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 454 GDLLEERQKVKKKMKATIDPIEKKLL---DYRQRAIKILANSFYGYYGYAKARWYCKECA 510
Query: 756 ALVTAKGREILLNT-KSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GR+ + T + + E ++V+Y DTD + D ++V K + N K
Sbjct: 511 ESVTAWGRQYIETTIREIEEKFGFKVLYADTDGFFATIPGADAETVKKKAKEFLDYINAK 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G YK + KKKYA + K+ +G+++VRRDWS++A E
Sbjct: 571 LPGLLELEYEGFYKRGFFVTKKKYAVID----EEDKITT----RGLEIVRRDWSEIAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ IL ++ +K++ L VP L I +Q+T+ ++Y
Sbjct: 623 QARVLEAILKHGD---------VEEAVRIVKEVTEKLSKYEVPPEKLVIYEQITRDLKDY 673
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
+ PHV VA RL K++ G ISYI+ + S RA +E + +K K
Sbjct: 674 --KATGPHVAVAKRL-AARGIKIRPGTVISYIVLKG--SGRIGDRAIPFDEF-DPAKHKY 727
Query: 994 DVNYYLSQQIHPVVTRLL 1011
D YY+ Q+ P V R+L
Sbjct: 728 DAEYYIENQVLPAVERIL 745
>gi|148690786|gb|EDL22733.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_e
[Mus musculus]
Length = 1105
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 526 VLVNNVEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 576
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 623
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 624 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 680
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 681 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 740
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 741 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ KM C KG++ VRRD L + + +IL
Sbjct: 801 LISKKRYAGLLFSSRSDAHDKMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 850
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 851 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 905
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 906 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 964
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 965 LRIFEPILG 973
>gi|403221257|dbj|BAM39390.1| DNA polymerase delta catalytic subunit [Theileria orientalis strain
Shintoku]
Length = 1072
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 218/417 (52%), Gaps = 43/417 (10%)
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQDS---D 675
G + Y G VL+P+KG++ I ++DF SLYPSI+ YN+C++T +P + + D
Sbjct: 548 GSNENNYEGATVLDPQKGYHTNPIAVLDFQSLYPSIMIAYNLCYSTLVPQNKILNHPEED 607
Query: 676 ITTLCEYLPEHQVDT----GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQK 729
+T + Y+ V GILP ++ L+E+RR+ K +M D +++ YD RQ
Sbjct: 608 VTRIPGYIDLCFVKATKRKGILPIIVENLIEARRKAKKMMAS---CQDPMLKKVYDGRQL 664
Query: 730 ALKLTANSMYGCLGFPNSRFF-AQPLAALVTAKGREILLNTKSLVENL---------NYE 779
ALK+T NS+YG G + F +A +T+ GR I+LNTK+++E+ + +
Sbjct: 665 ALKVTTNSVYGYTGAASGGFLPCVDVATAITSFGRNIILNTKNIIEDHFTVKNGYKNDAK 724
Query: 780 VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKL-YKQLELDIDGVYKYMLLLKKKKYA 838
V+YGDTDS+MI+ D +GN+ S+ + K + L + VY+ +LLL KK+YA
Sbjct: 725 VVYGDTDSVMINFGTEDIQEAIDLGNEAASKITSVSVKPITLLFEKVYRPLLLLNKKRYA 784
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
L +N K + KG++ VRRD+ L + Q+++ Y +
Sbjct: 785 GLY---YNNSKTYEKIDCKGIETVRRDFCML--------VQQMMERVLYLLLVELNLPAA 833
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
I E +K ++L + ++LL +TK L K EY R LPHV++A +L + K
Sbjct: 834 I-EFVKNKVSELLRNEIDISLLVVTKSLGKL--EYEQR--LPHVELAKKLRKRDPGKAPG 888
Query: 959 -GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD ISYII + EA RA + N+ L ID N+YL + I + R+ + +
Sbjct: 889 VGDRISYIIVKGTKGEAQYDRAEEPLYVTENN-LPIDTNHYL-ESIKTTLLRIFDVV 943
>gi|1840091|gb|AAB47255.1| DNA polymerase delta' [Mesocricetus auratus]
Length = 1102
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 523 VLVNNVEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 573
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 574 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 620
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 621 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 677
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 678 RQVLDGRQLALKVSANSVYGFTGAEVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLE 737
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
N N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 738 NGYNANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 797
Query: 831 LLKKKKYAALSISKL--SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S ++ +M C KG++ VRRD L + + +IL
Sbjct: 798 LISKKRYAGLLFSSQPDTHDRMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 847
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 848 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 902
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 903 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLGQQLAKPL 961
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 962 LRIFEPILG 970
>gi|432868483|ref|XP_004071560.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Oryzias
latipes]
Length = 1107
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 241/486 (49%), Gaps = 65/486 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL +++ V+P K EG E
Sbjct: 537 NYMEMARVTGV---PLSYLLSRGQQIKVVSQLLRQAMKQNLVMP-----VVKTEGGED-- 586
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRM 670
Y+G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT+ V
Sbjct: 587 -----------YTGATVIEPEKGYYSVPITTLDFSSLYPSIMMAHNLCYTTLLQKGSVER 635
Query: 671 LQ----DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
LQ D T + + V G+LP ++ L+ +R++ KA +K+ +L
Sbjct: 636 LQLSSEDFIKTPTGDQFVKSSVRKGLLPEILENLLSARKRAKAELKKETDPFKKQVL--- 692
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 693 DGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIERTKQLVESKYTISNGYQ 752
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYMLLLKK 834
+ +VIYGDTDS+M+ V +IG + + + ++L+ + VY LL+ K
Sbjct: 753 ADAKVIYGDTDSVMVKLGVATVKEAMEIGREAAEWVSSHFTPPIKLEFEKVYYPYLLINK 812
Query: 835 KKYAAL--SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
K+YA L S S ++ KM C KG++ VRRD L + + +IL +
Sbjct: 813 KRYAGLYFSSSADTHDKMDC----KGIETVRRDNCPLVANLINTCLQKIL---------I 859
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D Q +H K++ +DL + ++ L ITK+LT+ +EY ++A HV++A R+ +
Sbjct: 860 DRDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQA--HVELAERMRKRD 917
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ GD + Y+I + AA ++ + I L+N + ID YYL QQ+ + R+
Sbjct: 918 AGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENT--IPIDTQYYLEQQLSKPLLRI 975
Query: 1011 LEPIEG 1016
EPI G
Sbjct: 976 FEPILG 981
>gi|148690782|gb|EDL22729.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_a
[Mus musculus]
Length = 1127
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 548 VLVNNVEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 598
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 599 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 645
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 646 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 702
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 703 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 762
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 763 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 822
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ KM C KG++ VRRD L + + +IL
Sbjct: 823 LISKKRYAGLLFSSRSDAHDKMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 872
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 873 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 927
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 928 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 986
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 987 LRIFEPILG 995
>gi|194368602|pdb|2VWJ|A Chain A, Uracil Recognition In Archaeal Dna Polymerases Captured By
X-Ray Crystallography
Length = 773
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 215/438 (49%), Gaps = 55/438 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P NK + E R++ +Y+GG V EP++G ++
Sbjct: 354 EWFLLRKAYERNELAP------NKPDERELA-------RRRESYAGGYVKEPERGLWEN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDFRSLYPSIIITHNVSPDTLNREGCEEYDVAPQVGHKFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R++VK MK + LL D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 454 GDLLEERQKVKKKMKATIDPIEKKLL---DYRQRAIKILANSFYGYYGYAKARWYCKECA 510
Query: 756 ALVTAKGREILLNT-KSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GR+ + T + + E ++V+Y DTD + D ++V K + N K
Sbjct: 511 ESVTAWGRQYIETTIREIEEKFGFKVLYADTDGFFATIPGADAETVKKKAKEFLDYINAK 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G YK + KKKYA + K+ +G+++VRRDWS++A E
Sbjct: 571 LPGLLELEYEGFYKRGFFVTKKKYAVID----EEDKITT----RGLEIVRRDWSEIAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ IL ++ +K++ L VP L I +Q+T+ ++Y
Sbjct: 623 QARVLEAILKHGD---------VEEAVRIVKEVTEKLSKYEVPPEKLVIYEQITRDLKDY 673
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
+ PHV VA RL K++ G ISYI+ + S RA +E + +K K
Sbjct: 674 --KATGPHVAVAKRL-AARGIKIRPGTVISYIVLKG--SGRIGDRAIPFDEF-DPAKHKY 727
Query: 994 DVNYYLSQQIHPVVTRLL 1011
D YY+ Q+ P V R+L
Sbjct: 728 DAEYYIENQVLPAVERIL 745
>gi|308800812|ref|XP_003075187.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1| dna
pol (ISS) [Ostreococcus tauri]
gi|116061741|emb|CAL52459.1| DPOD1_ORYSA DNA polymerase delta catalytic subunit gb|AAX96341.1| dna
pol (ISS), partial [Ostreococcus tauri]
Length = 1115
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 241/480 (50%), Gaps = 52/480 (10%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+S + LL +++ ++P K+EG +
Sbjct: 537 NYIEMARVTGVPLNYL---LTRGQSIKVMSQLLRKARQRNMLIPHMA----KREGGNV-Q 588
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRML-- 671
A G AY G VLE K G+Y+ + +DF SLYPSI+ +N+C++T +P M+
Sbjct: 589 AEGG-----VAYEGATVLEAKSGYYEVPVATLDFASLYPSIMMAHNLCYSTLVPKHMVSK 643
Query: 672 ---QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+D + + + GILP +++L+ +R++ KA +K+ ++D ++ D
Sbjct: 644 LNPEDVGTSPAGDTFVKANNVKGILPEILEELLGARKRAKADLKK---ATDPFVKAVLDG 700
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + +++ TA GR ++ +TK +VE N
Sbjct: 701 RQLALKISANSVYGFTGATVGQLPCLEISSSTTAYGRTMIDHTKKMVEERYTTMNGYAGN 760
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKK 836
EVIYGDTDS+MI N D ++G + + + K ++L+ + VY LL+ KK+
Sbjct: 761 AEVIYGDTDSVMIKFNTPDLAEAMRLGEEAAVYVSDTFLKPIKLEFEKVYWPYLLISKKR 820
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YA L +N + + KG++ VRRD L + + V+ +IL E+ +
Sbjct: 821 YAGLL---WTNTEKYDKMDTKGIETVRRDNCLLVRQVVETVLEKILKERD---------V 868
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
Q ++++ DL + + L ITK TK + Y + A H+++A R+ +
Sbjct: 869 QGAVKYVQNTIADLLMNKLDFSQLVITKGFTKEADSYGVKMA--HIELAQRMRQRDPATA 926
Query: 957 K-QGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD I+Y+I + + A +++ + I L NN L ID N+YL + + R+ EPI
Sbjct: 927 PVVGDRIAYVIIKAAKNAKAYEKSEDPIYALDNN--LPIDTNHYLDHYLTKPLLRIFEPI 984
>gi|148690785|gb|EDL22732.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_d
[Mus musculus]
Length = 1101
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 526 VLVNNVEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 576
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 623
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 624 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 680
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 681 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 740
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 741 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ KM C KG++ VRRD L + + +IL
Sbjct: 801 LISKKRYAGLLFSSRSDAHDKMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 850
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 851 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 905
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 906 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 964
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 965 LRIFEPILG 973
>gi|14318657|gb|AAH09128.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus musculus]
gi|30962877|gb|AAH52670.1| Polymerase (DNA directed), delta 1, catalytic subunit [Mus musculus]
Length = 1105
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 526 VLVNNVEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 576
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 623
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 624 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 680
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 681 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 740
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 741 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ KM C KG++ VRRD L + + +IL
Sbjct: 801 LISKKRYAGLLFSSRSDAHDKMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 850
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 851 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 905
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 906 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 964
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 965 LRIFEPILG 973
>gi|301015727|pdb|2XHB|A Chain A, Crystal Structure Of Dna Polymerase From Thermococcus
Gorgonarius In Complex With Hypoxanthine-Containing Dna
Length = 773
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 215/438 (49%), Gaps = 55/438 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P NK + E R++ +Y+GG V EP++G ++
Sbjct: 354 EWFLLRKAYERNELAP------NKPDERELA-------RRRESYAGGYVKEPERGLWEN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDFRSLYPSIIITHNVSPDTLNREGCEEYDVAPQVGHKFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R++VK MK + LL D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 454 GDLLEERQKVKKKMKATIDPIEKKLL---DYRQRAIKILANSFYGYYGYAKARWYCKECA 510
Query: 756 ALVTAKGREILLNT-KSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GR+ + T + + E ++V+Y DTD + D ++V K + N K
Sbjct: 511 ESVTAWGRQYIETTIREIEEKFGFKVLYADTDGFFATIPGADAETVKKKAKEFLDYINAK 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G YK + KKKYA + K+ +G+++VRRDWS++A E
Sbjct: 571 LPGLLELEYEGFYKRGFFVTKKKYAVID----EEDKITT----RGLEIVRRDWSEIAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ IL ++ +K++ L VP L I +Q+T+ ++Y
Sbjct: 623 QARVLEAILKHGD---------VEEAVRIVKEVTEKLSKYEVPPEKLVIYEQITRDLKDY 673
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
+ PHV VA RL K++ G ISYI+ + S RA +E + +K K
Sbjct: 674 --KATGPHVAVAKRL-AARGIKIRPGTVISYIVLKG--SGRIGDRAIPFDEF-DPAKHKY 727
Query: 994 DVNYYLSQQIHPVVTRLL 1011
D YY+ Q+ P V R+L
Sbjct: 728 DAEYYIENQVLPAVERIL 745
>gi|194368604|pdb|2VWK|A Chain A, Uracil Recognition In Archaeal Dna Polymerases Captured By
X-Ray Crystallography. V93q Polymerase Variant
Length = 773
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 215/438 (49%), Gaps = 55/438 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P NK + E R++ +Y+GG V EP++G ++
Sbjct: 354 EWFLLRKAYERNELAP------NKPDERELA-------RRRESYAGGYVKEPERGLWEN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDFRSLYPSIIITHNVSPDTLNREGCEEYDVAPQVGHKFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R++VK MK + LL D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 454 GDLLEERQKVKKKMKATIDPIEKKLL---DYRQRAIKILANSFYGYYGYAKARWYCKECA 510
Query: 756 ALVTAKGREILLNT-KSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GR+ + T + + E ++V+Y DTD + D ++V K + N K
Sbjct: 511 ESVTAWGRQYIETTIREIEEKFGFKVLYADTDGFFATIPGADAETVKKKAKEFLDYINAK 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G YK + KKKYA + K+ +G+++VRRDWS++A E
Sbjct: 571 LPGLLELEYEGFYKRGFFVTKKKYAVID----EEDKITT----RGLEIVRRDWSEIAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ IL ++ +K++ L VP L I +Q+T+ ++Y
Sbjct: 623 QARVLEAILKHGD---------VEEAVRIVKEVTEKLSKYEVPPEKLVIYEQITRDLKDY 673
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
+ PHV VA RL K++ G ISYI+ + S RA +E + +K K
Sbjct: 674 --KATGPHVAVAKRL-AARGIKIRPGTVISYIVLKG--SGRIGDRAIPFDEF-DPAKHKY 727
Query: 994 DVNYYLSQQIHPVVTRLL 1011
D YY+ Q+ P V R+L
Sbjct: 728 DAEYYIENQVLPAVERIL 745
>gi|354497678|ref|XP_003510946.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cricetulus
griseus]
Length = 1070
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 491 VLVNNVEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 541
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 542 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 588
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 589 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 645
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 646 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLE 705
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
N N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 706 NGYNANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 765
Query: 831 LLKKKKYAALSISKL--SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S ++ +M C KG++ VRRD L + + +IL
Sbjct: 766 LISKKRYAGLLFSSQPDTHDRMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 815
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 816 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 870
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 871 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 929
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 930 LRIFEPILG 938
>gi|149056045|gb|EDM07476.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_c
[Rattus norvegicus]
gi|149056048|gb|EDM07479.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_c
[Rattus norvegicus]
Length = 1103
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 524 VLVNNVEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 574
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 575 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 621
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 622 AAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 678
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 679 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVETKYTLE 738
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 739 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 798
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ +M C KG++ VRRD L + + +IL
Sbjct: 799 LISKKRYAGLLFSSRSDAHDRMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 848
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 849 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 903
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 904 RKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 962
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 963 LRIFEPILG 971
>gi|346327129|gb|EGX96725.1| DNA polymerase delta catalytic subunit [Cordyceps militaris CM01]
Length = 1108
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 218/422 (51%), Gaps = 49/422 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR--------MLQDSD-- 675
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT+ R +++D D
Sbjct: 578 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLITRKDRIAQFNLVKDEDYI 637
Query: 676 ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALK 732
+T + + G+L +++L+ +R+Q K A+ P + L + RQ ALK
Sbjct: 638 VTPNGDTFVTTKQRKGLLAQILEELLSARKQAKRELAVETDPFKKAVL----NGRQLALK 693
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYG 783
++ANS+YG G + +A+ T+ GR+++ TK VE + + +VIYG
Sbjct: 694 ISANSVYGLTGATTGKLPCLAIASSTTSFGRQMIERTKDEVEKKYCIANGYSHDAQVIYG 753
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
DTDS+M+ + K+G + + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 754 DTDSVMVKFGTKELAEAMKLGEEAAAFVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYW 813
Query: 843 SKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+K KM + KG++ VRRD LA + V+ IL ++ +Q +
Sbjct: 814 TKTEKYDKM----DTKGLETVRRDNCLLAQTVIEKVLRMIL---------INRDVQGAQD 860
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GD 960
++K + DL V ++ L ITK LTK E+YT ++A HV++A R+ ++ GD
Sbjct: 861 YVKDMIADLLQNKVDMSKLVITKALTK--EDYTAKQA--HVELAARMKKRDAGSAPSLGD 916
Query: 961 TISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
++Y++ +++ + I L+NN + ID YYL Q+ +TR+ EPI G
Sbjct: 917 RVAYVMIRGAAGAKNFEKSEDPIYVLENN--VPIDTKYYLDNQLAKPLTRIFEPILGETK 974
Query: 1020 VR 1021
R
Sbjct: 975 AR 976
>gi|344257341|gb|EGW13445.1| DNA polymerase delta catalytic subunit [Cricetulus griseus]
Length = 1056
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 235/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 477 VLVNNVEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 527
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 528 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 574
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 575 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 631
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 632 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLE 691
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
N N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 692 NGYNANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 751
Query: 831 LLKKKKYAALSISKL--SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S ++ +M C KG++ VRRD L + + +IL
Sbjct: 752 LISKKRYAGLLFSSQPDTHDRMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 801
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 802 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 856
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 857 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 915
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 916 LRIFEPILG 924
>gi|324500650|gb|ADY40299.1| DNA polymerase delta catalytic subunit [Ascaris suum]
Length = 1091
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 217/418 (51%), Gaps = 43/418 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSD--ITT 678
+ G V+EP +GFY I +DF SLYPS++ +NIC+TT+ + L++ D ++
Sbjct: 566 FEGATVIEPIRGFYAVPIATLDFASLYPSVMIAHNICYTTLIQGQPSAQGLKEDDFEVSP 625
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+ V G+LP ++ L+ +R++ KA +K M + RQ ALK++ANS+
Sbjct: 626 SNNRFVKANVRRGLLPEILEDLLSARKRAKADLKNEK-DPFRCMVLNGRQLALKISANSV 684
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------NYEVIYGDTD 786
YG G + ++ VTA GR+++ TK+ VE + + +VIYGDTD
Sbjct: 685 YGFTGATVGKLPCLQISQSVTAFGRQMIDFTKNTVEEIYKKGYLNGKCPCDAKVIYGDTD 744
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ V D ++G E +K ++ ++L+ + VY LL+ KK+YA L ++
Sbjct: 745 SVMVKFGVKDIALAMELGQHAAVEVSKKFRSPIKLEFEKVYCPFLLINKKRYAGLYFTRP 804
Query: 846 -SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+ KM C KG++ VRRD L S+ + ++L L+ + EH K
Sbjct: 805 EKHDKMDC----KGLETVRRDNCPLVSKVLSACLEKML---------LEGDAKGALEHAK 851
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVA--LRLNNTNSKKLKQGDTI 962
K+ +DL + ++ L I+K+LT+ Y ++A HV +A +RL + S + GD +
Sbjct: 852 KVISDLLCNRIDISELIISKELTRQSTAYQAKQA--HVVLADRMRLRDAGSAP-RLGDRV 908
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
Y+I G A ++A + I L+NN + ID +YYL Q+ + R+ EPI G A
Sbjct: 909 PYVIVAKGQKVPAYEKAEDPIYVLQNN--IPIDTSYYLENQLAKPLARIFEPILGDKA 964
>gi|149056044|gb|EDM07475.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform CRA_b
[Rattus norvegicus]
Length = 1099
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 236/492 (47%), Gaps = 65/492 (13%)
Query: 549 KYEVQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK 607
+ V N +E R+T V G +LSR G+ + LL + ++P K
Sbjct: 521 RLMVLVNNVEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMRQGLLMP-----VVKT 571
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI- 666
EG E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 572 EGGED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL 618
Query: 667 ------PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSD 719
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D
Sbjct: 619 RPGAAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQ---ETD 675
Query: 720 LLMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--- 774
L + D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 676 PLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVETKY 735
Query: 775 ------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYK 827
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY
Sbjct: 736 TLENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYF 795
Query: 828 YMLLLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ 885
LL+ KK+YA L S S+ +M C KG++ VRRD L + + +IL
Sbjct: 796 PYLLISKKRYAGLLFSSRSDAHDRMDC----KGLEAVRRDNCPLVANLVTSSLRRIL--- 848
Query: 886 SYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVA 945
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A
Sbjct: 849 ------VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELA 900
Query: 946 LRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIH 1004
R+ + GD + Y+I AA ++ + + +S L ID YYL QQ+
Sbjct: 901 ERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLA 959
Query: 1005 PVVTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 960 KPLLRIFEPILG 971
>gi|324120754|dbj|BAJ78768.1| DNA polymerase delta catalytic subunit [Chrysoperla nipponensis]
Length = 1052
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 241/495 (48%), Gaps = 73/495 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R++ V N+L + G + LL Y++P
Sbjct: 479 NDMELARVSGVTINLL---MTRGEQIKVVTQLLSQAQAAGYLMP---------------- 519
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRM-- 670
KG+G + G V+EP +G+Y I +DFNSLYPSI+ +N+C+TT+ P
Sbjct: 520 VYKGQGTDDQ-FEGATVIEPVRGYYTDPIATLDFNSLYPSIMMAHNLCYTTLLHPSNKDK 578
Query: 671 --LQDSDITTL--CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
L + IT + + V G+LP ++ L+ +R++ K K+ +D + +
Sbjct: 579 FGLTEDQITKTPSNHFFVKPTVRRGLLPYILENLLAARKKAK---KELEAETDPVKKSVL 635
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------N 775
+ RQ ALKL+ANS+YG G N + ++ VTA GR ++ T+ VE
Sbjct: 636 NGRQLALKLSANSVYGFTGAQNGKLPCLEISGSVTAFGRTMIERTRQEVEEKYTMANGYE 695
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
N +VIYGDTDS+M+ V D + ++G + + + K + L+ + VY LL+ K
Sbjct: 696 HNAQVIYGDTDSVMVKFGVKDLERCMELGREAAAYVSAKFINPIRLEFEKVYYPYLLINK 755
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L +K KM C KG++ VRRD S L + + ++L ++
Sbjct: 756 KRYAGLYYTKPDKYDKMDC----KGIETVRRDNSPLVANTINLCLQKLLIQKD------- 804
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ EH K++ +DL + ++ L I+K+LTK EYT ++A HV++A ++ ++
Sbjct: 805 --PEGAIEHTKQVISDLLCNRIDISQLIISKELTK--NEYTAKQA--HVELAKKMKQRDA 858
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPVV 1007
Q GD + ++I S RAY+ E L+NN + IDV+YYL Q+ +
Sbjct: 859 GTAPQLGDRVPFVI----ISATKNTRAYDKAEDPIYVLENN--IPIDVDYYLQNQLAKPL 912
Query: 1008 TRLLEPIEGTDAVRI 1022
R+ +P+ G A I
Sbjct: 913 VRIFQPVLGDKAESI 927
>gi|324120732|dbj|BAJ78757.1| DNA polymerase delta catalytic subunit [Thrips palmi]
Length = 1091
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 241/497 (48%), Gaps = 77/497 (15%)
Query: 555 NQMEKIRITNVC-GNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N ME R+T V G++L+R G+ + LL E Y++P Q TG
Sbjct: 518 NYMEMARVTGVTLGSLLTR----GQQIKVVSQLLRKAKEHDYIMPTYQ---------STG 564
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
++ Y G V+EPK+G+Y I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 565 GDDQ--------YEGATVIEPKRGYYGDPISTLDFSSLYPSIMMAHNLCYTT----LLQA 612
Query: 674 SDI------------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
++ T Y + V G+LP ++ L+ +R++ KA +K+ +D
Sbjct: 613 NNREKLGLTPDQYSHTPANNYFVKASVRKGLLPEILESLLNARKKAKADLKK---ETDPF 669
Query: 722 MQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--- 776
Q D RQ ALK++ANS+YG G + ++ VTA GR ++ TK+ VE
Sbjct: 670 KQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKTEVETKYRI 729
Query: 777 --NYE----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYM 829
YE VIYGDTDS+M+ V + ++G + +K K ++L+ + VY
Sbjct: 730 ENGYEHDAVVIYGDTDSVMVKFGVKTLEEAMRLGQEAAEYVTSKFIKPIKLEFEKVYFPY 789
Query: 830 LLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
LL+ KK+YA L + KM C KG++ VRRD L + + +IL
Sbjct: 790 LLINKKRYAGLYFTSADKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKIL------ 839
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + K++ +DL + ++ L ITK+LTK+ +Y ++A HV++A ++
Sbjct: 840 ---IDRNPDGAVAYAKQVISDLLCNRIDISNLVITKELTKS--DYAAKQA--HVELAAKM 892
Query: 949 ---NNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHP 1005
+ N+ KL GD + Y++ A +A + + NS + ID YYL Q+
Sbjct: 893 KKRDPGNAPKL--GDRVPYVLTSASKGTPAYMKAEDPIYVLENS-IPIDFTYYLENQLSK 949
Query: 1006 VVTRLLEPIEGTDAVRI 1022
+ R+ EPI G A I
Sbjct: 950 PLLRIFEPILGDKAESI 966
>gi|324120694|dbj|BAJ78738.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1097
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 236/487 (48%), Gaps = 63/487 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL EK +V+P
Sbjct: 525 NYMEMARVTGV---PLSSLLTRGQQIKVVSQLLRKAREKDFVIP---------------- 565
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
A G G ++ Y G V+EPK+G+YD I +DF+SLYPSI+ +N+C+T++ +++
Sbjct: 566 AYSG-GTQEDQYEGATVIEPKRGYYDDPIATLDFSSLYPSIMMAHNLCYTSLLQPGVKEK 624
Query: 675 --------DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
T + + V G+LP ++ L+ +R++ KA +K+ L +L
Sbjct: 625 LGLTPDQYSRTPAGNFFVKQSVRKGLLPEILENLLAARKKAKADLKKETDPLKCKVL--- 681
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 682 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQRYCVANGYK 741
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
+ VIYGDTDS+MI V + +G + +K K ++L+ + VY LL+ K
Sbjct: 742 HDAVVIYGDTDSVMIKFGVKTLEDAMALGKEAAEYVSSKFIKPIKLEFEKVYYPYLLISK 801
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ KM C KG++ VRRD L + + ++L D D
Sbjct: 802 KRYAGLYFTRTDTYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL-----IDRDPD 852
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
L E+ K++ +DL + ++ L +TK+LTK+ +Y ++A HV++A ++ +
Sbjct: 853 GAL----EYAKQVISDLLCNRIDISQLVVTKELTKS--DYAAKQA--HVELANKMKKRDP 904
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
K GD + Y++ A +A + + NS + ID +YYL Q+ + R+ E
Sbjct: 905 GTAPKLGDRVPYVLVAAAKGTPAYMKAEDPIYVLENS-IPIDSSYYLENQLSKPLIRIFE 963
Query: 1013 PIEGTDA 1019
PI G A
Sbjct: 964 PILGDKA 970
>gi|402085670|gb|EJT80568.1| DNA polymerase delta catalytic subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1104
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 215/416 (51%), Gaps = 48/416 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT+ ++ +D D +
Sbjct: 577 YEGATVIEPTRGYYDAPIATLDFASLYPSIMQAHNLCYTTLISQKAIDAFKLEKDEDYTV 636
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 637 TPTGDMFVTVKRRKGLLAQILEELLSARKQAKRELAVETDPFKKAVL----NGRQLALKI 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G N +F +A+ T+ GR+++ TK VE + + +VIYGD
Sbjct: 693 SANSVYGLTGATNGKFPCLQIASSTTSYGRQMIEKTKQEVEAKYRIANGYSHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 753 TDSVMVKFGTKDLAEAMKLGEEAAQYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWT 812
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D + ++
Sbjct: 813 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVLGAQDY 859
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K+ DL V ++ L ITK LTK ++YT ++A HV++A R+ ++ GD
Sbjct: 860 VKETIADLLQNKVDMSKLVITKALTK--DDYTAKQA--HVELAQRMKKRDAGSAPGLGDR 915
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + +R+ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 916 VAYVMVKGAAGSKNFERSEDPIYVLENN--VPIDTKYYLDNQLSKPLGRIFEPILG 969
>gi|348559458|ref|XP_003465533.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cavia
porcellus]
Length = 1105
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 212/414 (51%), Gaps = 42/414 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSD---IT 677
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+ ++ D+D T
Sbjct: 579 YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLDADQFIRT 638
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLTA 735
+ + V G+LP ++ L+ +R++ KA + Q +D L + D RQ ALK++A
Sbjct: 639 PTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLRRQVLDGRQLALKVSA 695
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDTD 786
NS+YG G + ++ VT GR+++ TK LVE + + +V+YGDTD
Sbjct: 696 NSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVANGYSADAKVVYGDTD 755
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M V+ +G + S + + + L+ + VY LL+ KK+YA L S
Sbjct: 756 SVMCRFGVSSVAEAMDLGREAASWVSSHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSR 815
Query: 846 --SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
S+ +M C KG++ VRRD L + + ++L +D + H
Sbjct: 816 PDSHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL---------IDRDPEGAVAHA 862
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K I +DL + ++ L ITK+LT+A +Y+ ++A HV++A R+ + GD +
Sbjct: 863 KDIISDLLCNRIDISQLVITKELTRAAADYSGKQA--HVELAERMRKRDPGSAPSLGDRV 920
Query: 963 SYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I AA ++ + + +S L ID YYL QQ+ + R+ EPI G
Sbjct: 921 PYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPLLRIFEPILG 973
>gi|195377844|ref|XP_002047697.1| GJ11779 [Drosophila virilis]
gi|194154855|gb|EDW70039.1| GJ11779 [Drosophila virilis]
Length = 1092
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 240/487 (49%), Gaps = 63/487 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL K +++P + ++
Sbjct: 519 NYMEMARVTGV---PLESLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSSGSDEQ------ 569
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ + +D
Sbjct: 570 -----------YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLLLPGTKDK 618
Query: 675 DITT--LCEYLPEHQV------DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
T E P + V G+LP ++ L+ +R++ K +K + +D +
Sbjct: 619 MGLTDDQVERTPANNVFVKAELRRGLLPEILESLLAARKRAKNDLK---VETDPFKRQVL 675
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE 779
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK+ VE+ YE
Sbjct: 676 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIELTKNEVESHYTRANGYE 735
Query: 780 ----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
VIYGDTDS+M++ V + ++G + +K + ++L+ + VY LL+ K
Sbjct: 736 NDAVVIYGDTDSVMVNFGVKTLERSMELGREAADLVSSKFVRPIKLEFEKVYYPYLLINK 795
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L +K KM C KG++ VRRD S L + + ++L E+ D ++D
Sbjct: 796 KRYAGLYFTKPDKYDKMDC----KGIETVRRDNSPLVANLMNACLQKLLIERD-PDGAVD 850
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ K++ DL + ++ L ITK+L K +Y ++A HV++A ++ ++
Sbjct: 851 --------YAKQVIADLLCNRIDISQLVITKELAKT--DYAAKQA--HVELAAKMKKRDA 898
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
K GD + Y+IC + A Q+A + + NS + ID NYYL QQ+ + R+ E
Sbjct: 899 GTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENS-VPIDANYYLEQQLSKPLLRIFE 957
Query: 1013 PIEGTDA 1019
PI G A
Sbjct: 958 PILGDKA 964
>gi|324120708|dbj|BAJ78745.1| DNA polymerase delta catalytic subunit [Galloisiana yuasai]
Length = 994
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 237/488 (48%), Gaps = 65/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL EK Y++P G + +
Sbjct: 424 NYMEMARVTGVS---LSCLLTRGQQIKVVSQLLRKAKEKGYLIPTHNGGVQEDQ------ 474
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVR---- 669
Y G V+EPK+G+Y I +DF+SLYPSI+ +N+C+TT +PV
Sbjct: 475 -----------YEGATVIEPKRGYYGDPIATLDFSSLYPSIMMAHNLCYTTLLPVSVKDK 523
Query: 670 --MLQDSDITTLCEYL-PEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
+ QD T L + V G+LP ++ L+ +R++ K +K +L
Sbjct: 524 LGLTQDQFTKTPSNNLFVKSSVRKGLLPEILESLLSARKKAKNDLKNETNPFKQKVL--- 580
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------LN 777
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE+
Sbjct: 581 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEDRYKIANGFK 640
Query: 778 YE--VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
Y+ VIYGDTDS+M+ V + +G + + K ++L+ + VY LL+ K
Sbjct: 641 YDAMVIYGDTDSVMVKFGVKTLEEAMSLGREAAEYVSAKFVSPIKLEFEKVYFPYLLINK 700
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L +K + KM C KG++ VRRD S L + + ++L E+ T
Sbjct: 701 KRYAGLYFTKPDHYDKMDC----KGIETVRRDNSPLVANMMNTCLQKLLIERDPT----- 751
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
++ K++ +DL + ++ L ITK+L K +YT ++A HV++A ++ ++
Sbjct: 752 ----GAVDYAKQVISDLLCNRIDISQLVITKELAK--NDYTAKQA--HVELASKMRKRDA 803
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K GD + YII + A +A + I L+NN + ID NYYL Q+ + R+
Sbjct: 804 GTAPKLGDRVPYIIVAAAKNTPAYMKAEDPIYVLENN--IPIDSNYYLENQLSKPLLRIF 861
Query: 1012 EPIEGTDA 1019
PI G A
Sbjct: 862 TPILGDKA 869
>gi|453087535|gb|EMF15576.1| DNA polymerase delta catalytic subunit [Mycosphaerella populorum
SO2202]
Length = 1107
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 239/485 (49%), Gaps = 64/485 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+ + L E+ V+PD K EG +
Sbjct: 530 NYTEMARVTGVPFNFL---LSKGQQVKFISQLFRKALEQQLVVPDL-----KSEGSDE-- 579
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT+
Sbjct: 580 ----------QYEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLLNKNAIAK 629
Query: 668 VRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
+ + +D D +T + +V G+L +++L+ +R++ K K+ + +D +
Sbjct: 630 LNLKKDEDYIVTPNGDLFCTTKVRKGLLSQILEELLGARKRAK---KELAIETDPFKKAV 686
Query: 726 I--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
+ RQ ALK++ANS+YG G + +A+ TA GR+++ TK VE
Sbjct: 687 LNGRQLALKISANSVYGLTGATVGKLPCLAIASSTTAYGRQMIEKTKEEVEARYTIANGY 746
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLK 833
+ + +VIYGDTDS+M+ ND ++GN NK K ++L+ + VY LL+
Sbjct: 747 SHDAQVIYGDTDSVMVKFGPNDLAKAMELGNDAADYVSNKFIKPIKLEFEKVYYPYLLIN 806
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L +K + + KG++ VRRD +L Q L E S +D
Sbjct: 807 KKRYAGLYWTKPDKWDKM---DTKGIETVRRDNCRLV---------QNLIETSLKMLLID 854
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+Q +++K+ ++L G + L+ L ITK L+K +Y +++A H ++A R+ ++
Sbjct: 855 QDVQGAQDYVKETISELLQGRIDLSNLVITKALSKT--DYANKQA--HTELAERMRKRDA 910
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
GD ++Y++ + +++ + I L+NN + ID YYL Q+ + R+
Sbjct: 911 GSAPALGDRVAYVMVKGAAGSKGWEKSEDPIFVLENN--MPIDTKYYLDNQLAKPLGRIF 968
Query: 1012 EPIEG 1016
EPI G
Sbjct: 969 EPILG 973
>gi|2827903|gb|AAB99910.1| DNA polymerase delta catalytic subunit [Mus musculus]
Length = 1105
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 526 VLVNNVEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 576
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 623
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 624 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 680
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 681 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 740
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ VY L
Sbjct: 741 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFKKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ KM C KG++ VRRD L + + +IL
Sbjct: 801 LISKKRYAGLLFSSRSDAHDKMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 850
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 851 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 905
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 906 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 964
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 965 LRIFEPILG 973
>gi|400602303|gb|EJP69905.1| DNA polymerase family B [Beauveria bassiana ARSEF 2860]
Length = 1106
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 216/417 (51%), Gaps = 49/417 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR--------MLQDSD-- 675
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT+ R +++D D
Sbjct: 578 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLITRKDRIAQFNLVKDEDYI 637
Query: 676 ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALK 732
+T + + G+L +++L+ +R+Q K A+ P + L + RQ ALK
Sbjct: 638 VTPNGDMFVTTKQRKGLLAQILEELLSARKQAKRELAVETDPFKKAVL----NGRQLALK 693
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYG 783
++ANS+YG G + +A+ T+ GR+++ TK VE + + +VIYG
Sbjct: 694 ISANSVYGLTGATTGKLPCLAIASSTTSFGRQMIEKTKDEVEKKYCIANGYSHDAQVIYG 753
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
DTDS+M+ + K+G + + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 754 DTDSVMVKFGTKELAEAMKLGEEAAAFVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYW 813
Query: 843 SKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+K KM + KG++ VRRD LA + V+ IL +D +Q +
Sbjct: 814 TKTEKYDKM----DTKGLETVRRDNCLLAQTVIEKVLRMIL---------IDRDVQGAQD 860
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GD 960
++K DL V ++ L ITK LTK E+Y+ ++A HV++A R+ ++ GD
Sbjct: 861 YVKDTIADLLQNKVDMSKLVITKALTK--EDYSAKQA--HVELAARMKKRDAGSAPALGD 916
Query: 961 TISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ +++ + I L+NN + ID YYL Q+ +TR+ EPI G
Sbjct: 917 RVAYVMIRGAAGAKNFEKSEDPIYVLENN--VPIDTKYYLDNQLAKPLTRIFEPILG 971
>gi|150400109|ref|YP_001323876.1| DNA polymerase Pol2 [Methanococcus vannielii SB]
gi|150012812|gb|ABR55264.1| DNA polymerase Pol2 [Methanococcus vannielii SB]
Length = 810
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 230/452 (50%), Gaps = 65/452 (14%)
Query: 579 SERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGF 638
S+ E+LLL ++ V P+K G N+ + R +++Y GG V EP KG
Sbjct: 387 SQMVEYLLLKNSYKLGVVSPNKPSG------------NEYQKRIRSSYEGGYVKEPLKGI 434
Query: 639 YDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQV--------DT 690
++ II MDF SLYPSII +NI TI C + +V T
Sbjct: 435 HED-IISMDFLSLYPSIIMSHNISPETINC---------DCCNFKEAEKVLGHTFCKKQT 484
Query: 691 GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY---DIRQKALKLTANSMYGCLGFPNS 747
GI+P + L+ R+++K ++K+ L ++ +Y D QK++K+ ANS YG L FP +
Sbjct: 485 GIVPKTLMDLINRRKKIKEILKEKALKNEFDEEYKILDYEQKSIKVLANSHYGYLAFPMA 544
Query: 748 RFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCN-----VNDYDSVFK 802
R++++ A + T GR + T EN + VIY DTD N ++ + K
Sbjct: 545 RWYSKDCAEVTTHLGRSYIQKTIEEAENFGFNVIYADTDGFYSKWNSKNGIISKEKLLEK 604
Query: 803 IGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVV 862
+K+ +KL ++EL+ +G +K + + KKKYA + N K+ IKG++VV
Sbjct: 605 TKEFLKTINDKLPGEMELEFEGHFKRGIFVTKKKYALID----ENEKVT----IKGLEVV 656
Query: 863 RRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEI 922
RRDWS ++ + K V+ ++L + D +NI ++K +L G V L I
Sbjct: 657 RRDWSNISKKTQKNVLDELLKHGNI------DSAKNI---IQKTIDELKKGNVDKEDLLI 707
Query: 923 TKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNI 982
QLTK E+Y + PHV+VA ++ + ++ GD ISYII DG + + ++RA
Sbjct: 708 HTQLTKRIEDY--KTTAPHVEVAKKIAKAGN-RINVGDVISYIIT-DGKN-SISERA--- 759
Query: 983 EELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
EL N+K D NYY+ QI P V R++E +
Sbjct: 760 -ELIENAK-SYDTNYYIENQILPPVIRIMEAL 789
>gi|194873189|ref|XP_001973157.1| GG13508 [Drosophila erecta]
gi|190654940|gb|EDV52183.1| GG13508 [Drosophila erecta]
Length = 1092
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 219/423 (51%), Gaps = 47/423 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----------RMLQDSD 675
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ + LQD
Sbjct: 566 YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLVLGGTREKLREQENLQDDQ 625
Query: 676 I--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKAL 731
+ T Y + +V G+LP ++ L+ +R++ K +K + +D + D RQ AL
Sbjct: 626 VERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK---VETDPFKRKVLDGRQLAL 682
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIY 782
K++ANS+YG G + ++ VTA GR ++ TK+ VE+ N VIY
Sbjct: 683 KISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEMTKNEVESHYSQANGYENNAVVIY 742
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+M++ V + ++G + +K ++L+ + VY LL+ KK+YA L
Sbjct: 743 GDTDSVMVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLY 802
Query: 842 ISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ + KM C KG++ VRRD S L + + ++L E+ D ++
Sbjct: 803 FTRPDAYDKMDC----KGIETVRRDNSPLVANLMNSCLQKLLIERD-PDGAV-------- 849
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQG 959
++K++ DL + ++ L ITK+L K +Y ++A HV++A ++ + K G
Sbjct: 850 AYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA--HVELAAKMKKRDPGTAPKLG 905
Query: 960 DTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
D + Y+IC + A Q+A + + NS + ID YYL QQ+ + R+ EPI G +A
Sbjct: 906 DRVPYVICAAAKNTPAYQKAEDPLYVLENS-VPIDATYYLEQQLSKPLLRIFEPILGDNA 964
Query: 1020 VRI 1022
I
Sbjct: 965 ESI 967
>gi|326480238|gb|EGE04248.1| DNA polymerase delta catalytic subunit [Trichophyton equinum CBS
127.97]
Length = 1111
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 238/488 (48%), Gaps = 69/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+PD + N +
Sbjct: 533 NYTEMARVTGVPFNFLL-----ARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQ---- 583
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP + +Y I +DF SLYPSIIQ +N+C+TT+
Sbjct: 584 ------------QYEGATVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLNKRTV 631
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+ + +D D +T + +V G+L +++L+ +R++ K A+ K P + L
Sbjct: 632 EKLGLKKDEDYIVTPNDDMFCTAKVRKGLLSQILEELLTARKRAKRELAVEKDPFKKAVL 691
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G N + +A+ T+ GR+++ TK VE
Sbjct: 692 ----NGRQLALKISANSVYGITGATNGKLPCLAIASSTTSYGRQMIEKTKDEVEARYTIS 747
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYML 830
+ + +VIYGDTDS+M+ D K+G + +K K ++L+ + VY L
Sbjct: 748 NGYSHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGFVSSKFMKPIKLEFEKVYYPYL 807
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L +N + KG++ VRRD L + V+++IL
Sbjct: 808 LINKKRYAGLY---WTNPVKYDKMDTKGIETVRRDNCLLVQTVIETVLNKIL-------- 856
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + ++K I +DL V ++ L ITK LTK EEYT ++A HV++ R+
Sbjct: 857 -IDRNVNGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQA--HVELVERMRK 911
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I T +++ + I L+NN + ID YYL Q+ +T
Sbjct: 912 RDAGSAPTLGDRVAYVIVGGATGAKNYEKSEDPIYVLENN--IPIDTRYYLENQLAKPLT 969
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 970 RIFEPILG 977
>gi|1027513|emb|CAA61369.1| DNA polymerase delta [Drosophila melanogaster]
Length = 1092
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 218/423 (51%), Gaps = 47/423 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----------RMLQDSD 675
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ + LQD
Sbjct: 566 YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLVLGGTREKLRQQENLQDDQ 625
Query: 676 I--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKAL 731
+ T Y + +V G+LP ++ L+ +R++ K +K + +D + D RQ AL
Sbjct: 626 VERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK---VETDPFKRKVLDGRQLAL 682
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIY 782
K++ANS+YG G + ++ VTA GR ++ TK+ VE+ N VIY
Sbjct: 683 KISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEMTKNEVESHYTQANGYENNAVVIY 742
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+M++ V + ++G + +K ++L+ + VY LL+ KK+YA L
Sbjct: 743 GDTDSVMVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLY 802
Query: 842 ISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ KM C KG++ VRRD S L + + ++L E+ D ++
Sbjct: 803 FTRPDTYDKMDC----KGIETVRRDNSPLVANLMNSCLQKLLIERD-PDGAV-------- 849
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQG 959
++K++ DL + ++ L ITK+L K +Y ++A HV++A ++ + K G
Sbjct: 850 AYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA--HVELAAKMKKRDPGTAPKLG 905
Query: 960 DTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
D + Y+IC + A Q+A + + NS + ID YYL QQ+ + R+ EPI G +A
Sbjct: 906 DRVPYVICAAAKNTPAYQKAEDPLYVLENS-VPIDATYYLEQQLSKPLLRIFEPILGDNA 964
Query: 1020 VRI 1022
I
Sbjct: 965 ESI 967
>gi|47219672|emb|CAG02717.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1008
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 236/483 (48%), Gaps = 59/483 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL ++ V+P K EG E
Sbjct: 438 NYMEMARVTGV---PLTYLLSRGQQIKVVSQLLRQAMKQDLVMP-----VVKTEGGED-- 487
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT+ + QD
Sbjct: 488 -----------YTGATVIEPEKGYYSIPIATLDFSSLYPSIMMAHNLCYTTLLQKGAQDK 536
Query: 675 ------DI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
D T + + V G+LP ++ L+ +R++ KA +K+ +L
Sbjct: 537 YSLSREDFIKTPTGDLFVKSSVRKGLLPEILENLLSARKRAKAELKKETDPFKRQVL--- 593
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 594 DGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEQTKQLVESKYTISNGYQ 653
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKK 834
+ +VIYGDTDS+M+ V IG + + + ++L+ + VY LL+ K
Sbjct: 654 ADAKVIYGDTDSVMVKLGVATVKEAMSIGKEAAEWVSSHFIMPIKLEFEKVYYPYLLINK 713
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L S SN + + KG++ VRRD L + + +IL +D
Sbjct: 714 KRYAGLYFS--SNAETHDKMDCKGIETVRRDNCPLVANLINTCLQKIL---------IDR 762
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
Q +H K++ +DL + ++ L ITK+LT+ +EY ++A HV++A R+ ++
Sbjct: 763 DPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQA--HVELAERMRKRDAG 820
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
GD + Y+I + AA ++ + + NS + ID YYL QQ+ + R+ EP
Sbjct: 821 SAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENS-IPIDTQYYLEQQLSKPLLRIFEP 879
Query: 1014 IEG 1016
I G
Sbjct: 880 ILG 882
>gi|24664937|ref|NP_524099.2| DNA-polymerase-delta [Drosophila melanogaster]
gi|13124718|sp|P54358.2|DPOD1_DROME RecName: Full=DNA polymerase delta catalytic subunit
gi|7294203|gb|AAF49555.1| DNA-polymerase-delta [Drosophila melanogaster]
gi|21064603|gb|AAM29531.1| RE60511p [Drosophila melanogaster]
Length = 1092
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 218/423 (51%), Gaps = 47/423 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----------RMLQDSD 675
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ + LQD
Sbjct: 566 YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLVLGGTREKLRQQENLQDDQ 625
Query: 676 I--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKAL 731
+ T Y + +V G+LP ++ L+ +R++ K +K + +D + D RQ AL
Sbjct: 626 VERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK---VETDPFKRKVLDGRQLAL 682
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIY 782
K++ANS+YG G + ++ VTA GR ++ TK+ VE+ N VIY
Sbjct: 683 KISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEMTKNEVESHYTQANGYENNAVVIY 742
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+M++ V + ++G + +K ++L+ + VY LL+ KK+YA L
Sbjct: 743 GDTDSVMVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLY 802
Query: 842 ISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ KM C KG++ VRRD S L + + ++L E+ D ++
Sbjct: 803 FTRPDTYDKMDC----KGIETVRRDNSPLVANLMNSCLQKLLIERD-PDGAV-------- 849
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQG 959
++K++ DL + ++ L ITK+L K +Y ++A HV++A ++ + K G
Sbjct: 850 AYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA--HVELAAKMKKRDPGTAPKLG 905
Query: 960 DTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
D + Y+IC + A Q+A + + NS + ID YYL QQ+ + R+ EPI G +A
Sbjct: 906 DRVPYVICAAAKNTPAYQKAEDPLYVLENS-VPIDATYYLEQQLSKPLLRIFEPILGDNA 964
Query: 1020 VRI 1022
I
Sbjct: 965 ESI 967
>gi|324120724|dbj|BAJ78753.1| DNA polymerase delta catalytic subunit [Zorotypus sp. 154-1]
Length = 999
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 241/490 (49%), Gaps = 69/490 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL E+ Y++P
Sbjct: 429 NYMEMARVTGVS---LSSLLTRGQQIKVVSQLLRKAREQGYLMP---------------- 469
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
A +G G+ + + G V+EPKKG+Y I+ +DF+SLYPSI+ +N+C+TT+
Sbjct: 470 AYQGVGQDEQ-FEGATVIEPKKGYYADPIVTLDFSSLYPSIMMAHNLCYTTLLQGNAKDK 528
Query: 668 VRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ +D + T + V G+LP ++ L+ +R++ KA +K +D +
Sbjct: 529 FGLTEDQYLKTPTANFFVRKSVRKGLLPEILENLLAARKRAKADLKN---ETDPFKKKVL 585
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-NLNYE---- 779
D RQ ALK++ANS+YG G + +++ VTA GR ++ TK VE + N E
Sbjct: 586 DGRQLALKISANSVYGFTGAQVGKLPCLEISSSVTAFGRTMIEQTKQEVEQHYNIENGFS 645
Query: 780 ----VIYGDTDSLMISCNVNDYDSVFKIGNQ-IKSECNKLYKQLELDIDGVYKYMLLLKK 834
VIYGDTDS+MI V + ++G Q + +K ++L+ + VY LL+ K
Sbjct: 646 HDACVIYGDTDSVMIKFGVKKLEEAMELGRQSAEFVSSKFINPIKLEFEKVYFPYLLINK 705
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDY 890
K+YA L ++ KM C KG++ VRRD S L + + ++L D DY
Sbjct: 706 KRYAGLYFTRPDKYDKMDC----KGLETVRRDNSPLVANMINTCLQKLLIDRDPNGAVDY 761
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+ K++ +DL + ++ L ITK+LTK+ +Y ++A HV++A ++
Sbjct: 762 A------------KEVISDLLCNRIDISQLVITKELTKS--DYAGKQA--HVELAAKMKK 805
Query: 951 TNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+ K GD + Y++ + A +A + + NS + ID +YYL Q+ + R
Sbjct: 806 RDPGTAPKLGDRVPYVLTAAAKNTPAYLKAEDPIYVLENS-VPIDFDYYLENQLSKPLVR 864
Query: 1010 LLEPIEGTDA 1019
+ EPI G A
Sbjct: 865 IFEPILGEKA 874
>gi|315042333|ref|XP_003170543.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
gi|311345577|gb|EFR04780.1| DNA polymerase delta catalytic subunit [Arthroderma gypseum CBS
118893]
Length = 1112
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 237/488 (48%), Gaps = 69/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+PD + +N +
Sbjct: 534 NYTEMARVTGVPFNFLL-----ARGQQIKFISQLFRKALEQKLVIPDLKNDENSNQ---- 584
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------- 665
Y G V+EP + +Y I +DF SLYPSIIQ +N+C+TT
Sbjct: 585 ------------QYEGATVIEPVRDYYAVPIATLDFASLYPSIIQAHNLCYTTLLNKRTV 632
Query: 666 --IPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+ ++ +D +T + ++ G+L +++L+ +R++ K A+ K P + L
Sbjct: 633 EKLGLKKGEDYIVTPNDDMFCTTKIRKGLLSQILEELLTARKRAKRELAIEKDPFKKAVL 692
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---- 776
+ RQ ALK++ANS+YG G N + P+A+ T+ GR+++ TK VE
Sbjct: 693 ----NGRQLALKISANSVYGITGATNGKLPCLPIASSTTSYGRQMIEKTKEEVEARYTIS 748
Query: 777 -----NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYML 830
+ +VIYGDTDS+M+ D K+G + +K K ++L+ + VY L
Sbjct: 749 NGYAHDAKVIYGDTDSVMVKFGTADLAEAMKLGEEAAGFVSSKFMKPIKLEFEKVYYPYL 808
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L +N + KG++ VRRD L + V+++IL
Sbjct: 809 LINKKRYAGLF---WTNPTKYDKMDTKGIETVRRDNCLLVQTVIETVLNKIL-------- 857
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + ++K I +DL V ++ L ITK LTK E+Y ++A HV++ R+
Sbjct: 858 -IDRNVNGAETYVKNIISDLLQNKVDMSKLVITKALTK--EKYQGKQA--HVELVERMRK 912
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I T ++A + I L+NN + ID YYL Q+ +T
Sbjct: 913 RDAGSAPTLGDRVAYVIVSGVTGAKNYEKAEDPIYVLENN--IPIDTRYYLENQLAKPLT 970
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 971 RIFEPILG 978
>gi|195477860|ref|XP_002086418.1| GE23127 [Drosophila yakuba]
gi|194186208|gb|EDW99819.1| GE23127 [Drosophila yakuba]
Length = 1092
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 218/423 (51%), Gaps = 47/423 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----------RMLQDSD 675
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ + LQD
Sbjct: 566 YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLVLGGTREKLREQENLQDDQ 625
Query: 676 I--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKAL 731
+ T Y + +V G+LP ++ L+ +R++ K +K + +D + D RQ AL
Sbjct: 626 VERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK---VETDPFKRKVLDGRQLAL 682
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIY 782
K++ANS+YG G + ++ VTA GR ++ TK+ VE+ N VIY
Sbjct: 683 KISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEMTKNEVESHYTQANGYENNAVVIY 742
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+M++ V + ++G + +K ++L+ + VY LL+ KK+YA L
Sbjct: 743 GDTDSVMVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLY 802
Query: 842 ISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ KM C KG++ VRRD S L + + ++L E+ D ++
Sbjct: 803 FTRPDTYDKMDC----KGIETVRRDNSPLVANLMNSCLQKLLIERD-PDGAV-------- 849
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQG 959
++K++ DL + ++ L ITK+L K +Y ++A HV++A ++ + K G
Sbjct: 850 AYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA--HVELAAKMKKRDPGTAPKLG 905
Query: 960 DTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
D + Y+IC + A Q+A + + NS + ID YYL QQ+ + R+ EPI G +A
Sbjct: 906 DRVPYVICAAAKNTPAYQKAEDPLYVLENS-VPIDATYYLEQQLSKPLLRIFEPILGDNA 964
Query: 1020 VRI 1022
I
Sbjct: 965 ESI 967
>gi|350645608|emb|CCD59733.1| DNA polymerase delta catalytic subunit,putative [Schistosoma mansoni]
Length = 1177
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 241/499 (48%), Gaps = 78/499 (15%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V L+ L G+ + LL HE Y+LP Q ++G+E
Sbjct: 588 NNIEMARVTGV---PLTYLLTRGQQVKVVSQLLRKAHEHGYLLPTYQ----SQQGDE--- 637
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT--------- 665
+ G VLEP+KGFY++ I +DF SLYPSI+ +N+C+TT
Sbjct: 638 -----------FVGATVLEPRKGFYNEPIATLDFASLYPSIMMAHNLCYTTLLQVNTTPH 686
Query: 666 ----------IPVRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ 713
+ L D D T Y + + GILP +++L+ +R++ KA + +
Sbjct: 687 GSTGGGIQALVQRYNLTDEDYIKTPTGAYFVKSHICHGILPEILQQLLSARKKAKAELAK 746
Query: 714 PNLSSDLLMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
+D L + D RQ ALK++ANS+YG G + ++A VT+ GR ++ TK
Sbjct: 747 ---ETDPLRKRVLDGRQLALKISANSVYGFTGAQVGKLPCLEISASVTSFGRLMIEQTKL 803
Query: 772 LVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELD 821
VE + VIYGDTDS+M V+ ++G Q ++ + K + L+
Sbjct: 804 HVEKKFTIANGYKHDAVVIYGDTDSVMCKFGVSTVTEAMELGRQAAEIISEEFPKPIRLE 863
Query: 822 IDGVYKYMLLLKKKKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQ 880
+ VY LL+ KK+YA L +K + KM C KG++ VRRD S L + + +
Sbjct: 864 FEKVYCPYLLINKKRYAGLYFTKPDRHDKMDC----KGIETVRRDNSPLVANLINACLER 919
Query: 881 ILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALP 940
IL +D + + + +DL + ++ L I+K+LTK EEYT ++A
Sbjct: 920 IL---------IDRDPNAAISYAQSVISDLLCNRIDISQLVISKELTKTDEEYTGKQA-- 968
Query: 941 HVQVALRLNNTNSKKLKQ-GDTISYIICE-DGTSEAATQRAYN-IEELKNNSKLKIDVNY 997
HV++A ++ + GD + Y+I G + AA +A + + L++N + ID Y
Sbjct: 969 HVELAAKMRKRDPGSAPNLGDRVPYVITAVGGKNTAAYAKAEDPLYVLEHN--VPIDTKY 1026
Query: 998 YLSQQIHPVVTRLLEPIEG 1016
YL Q+ + R+ EPI G
Sbjct: 1027 YLENQLANPLLRIFEPILG 1045
>gi|121716875|ref|XP_001275938.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
gi|119404095|gb|EAW14512.1| DNA polymerase delta large chain [Aspergillus clavatus NRRL 1]
Length = 1105
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 243/487 (49%), Gaps = 69/487 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +FL L E+ V+P N K +E
Sbjct: 529 NYTEMARVTGVPFNFLL-----SRGQQVKFLSQLFRKALEQQLVIP------NMKSTDEQ 577
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP +G+Y I +DF SLYPSIIQ +N+C+TT+
Sbjct: 578 D------------YEGATVIEPIRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNKNSV 625
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+++ +D D +T + +V G+L +++L+ +R++ K K+ + +D +
Sbjct: 626 EKLKLKKDDDYIVTPNGDMFCTAKVRKGLLSQILEELLSARKRAK---KELAIETDPFKK 682
Query: 724 YDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
+ RQ ALK++ANS+YG G + P+A+ T+ GR+++ TK VE
Sbjct: 683 AVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKQEVEAKYTIAN 742
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLL 831
+ + +VIYGDTDS+M+ V++ + K+G + +K K ++L+ + VY LL
Sbjct: 743 GYSHDAKVIYGDTDSVMVKFGVSELEDAMKLGQEAADFVSSKFLKPIKLEFEKVYFPYLL 802
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
+ KK+YA L +N K + KG++ VRRD L + V+ +IL
Sbjct: 803 INKKRYAGLY---WTNPKKFDKMDTKGIETVRRDNCLLVQNVIETVLHKIL--------- 850
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D + +++K +DL V ++ L ITK L+KA +YT ++A HV++A R+
Sbjct: 851 IDRDIDGAQDYVKDTISDLLQNKVDMSKLVITKALSKA--DYTAKQA--HVELAERMRKR 906
Query: 952 NSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ GD ++Y+I + G S+ + I L+NN + ID YYL Q+ + R
Sbjct: 907 DAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLANPLGR 964
Query: 1010 LLEPIEG 1016
+ EPI G
Sbjct: 965 IFEPILG 971
>gi|195590609|ref|XP_002085037.1| GD12524 [Drosophila simulans]
gi|194197046|gb|EDX10622.1| GD12524 [Drosophila simulans]
Length = 1096
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 218/423 (51%), Gaps = 47/423 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----------RMLQDSD 675
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ + LQD
Sbjct: 566 YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLVLGGTREKLRQQENLQDDQ 625
Query: 676 I--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKAL 731
+ T Y + +V G+LP ++ L+ +R++ K +K + +D + D RQ AL
Sbjct: 626 VERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK---VETDPFKRKVLDGRQLAL 682
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIY 782
K++ANS+YG G + ++ VTA GR ++ TK+ VE+ N VIY
Sbjct: 683 KISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIELTKNEVESHYTQANGYENNAVVIY 742
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+M++ V + ++G + +K ++L+ + VY LL+ KK+YA L
Sbjct: 743 GDTDSVMVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVYYPYLLINKKRYAGLY 802
Query: 842 ISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
++ KM C KG++ VRRD S L + + ++L E+ D ++
Sbjct: 803 FTRPDTYDKMDC----KGIETVRRDNSPLVANLMNSCLQKLLIERD-PDGAV-------- 849
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQG 959
++K++ DL + ++ L ITK+L K +Y ++A HV++A ++ + K G
Sbjct: 850 AYVKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA--HVELAAKMKKRDPGTAPKLG 905
Query: 960 DTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
D + Y+IC + A Q+A + + NS + ID YYL QQ+ + R+ EPI G +A
Sbjct: 906 DRVPYVICAAAKNTPAYQKAEDPLYVLENS-VPIDATYYLEQQLSKPLLRIFEPILGDNA 964
Query: 1020 VRI 1022
I
Sbjct: 965 ESI 967
>gi|150866455|ref|XP_001386065.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
gi|149387711|gb|ABN68036.2| DNA polymerase delta catalytic subunit (DNA polymerase III)
[Scheffersomyces stipitis CBS 6054]
Length = 1070
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 218/413 (52%), Gaps = 43/413 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT------TIPVRMLQDSDITTL 679
Y G V+EP +G+YD I +DF+SLYPSI+ +N+C+T TI L + D T
Sbjct: 547 YEGATVIEPSRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNIQTIKAFNLTEDDYTRT 606
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ + +L+ +R++ KA +K+ D+L + RQ ALK++A
Sbjct: 607 PNGDYFVKDHKKQGILPTILNELLTARKKAKADLKKETDPFKRDVL---NGRQLALKISA 663
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 664 NSVYGFTGATIGKLPCLAISSSVTAFGREMIEKTKNEVQEFYSKKNGYPYDAQVIYGDTD 723
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + + K K ++L+ + VY LL+ KK+YA L ++
Sbjct: 724 SVMVKFGYQDLETCMKLGEEAANYVSTKFKKPIKLEFEKVYFPYLLINKKRYAGLYWTRP 783
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR-LQNIHEHMK 904
+ + KG++ VRRD +L VI+++L ++ L+DR ++ +K
Sbjct: 784 DKFDKM---DTKGIETVRRDNCRLVQN----VITKVL------EFILEDRDVEKAQRFVK 830
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL V L+ L ITK K +Y ++A HV++A R+ ++ GD ++
Sbjct: 831 QTIADLLQNRVDLSQLVITKAYAK--HDYAAKQA--HVELAERMKKRDAGSAPTLGDRVA 886
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I + S+ +++ + + NS L IDV YYL Q+ + R+ PI G
Sbjct: 887 YVIIKGSGSDKNYEKSEDPLYVLENS-LPIDVKYYLDNQLTKPLERIFNPILG 938
>gi|256087234|ref|XP_002579779.1| DNA polymerase delta catalytic subunit [Schistosoma mansoni]
Length = 1182
Score = 166 bits (420), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 241/499 (48%), Gaps = 78/499 (15%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V L+ L G+ + LL HE Y+LP Q ++G+E
Sbjct: 588 NNIEMARVTGV---PLTYLLTRGQQVKVVSQLLRKAHEHGYLLPTYQ----SQQGDE--- 637
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT--------- 665
+ G VLEP+KGFY++ I +DF SLYPSI+ +N+C+TT
Sbjct: 638 -----------FVGATVLEPRKGFYNEPIATLDFASLYPSIMMAHNLCYTTLLQVNTTPH 686
Query: 666 ----------IPVRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ 713
+ L D D T Y + + GILP +++L+ +R++ KA + +
Sbjct: 687 GSTGGGIQALVQRYNLTDEDYIKTPTGAYFVKSHICHGILPEILQQLLSARKKAKAELAK 746
Query: 714 PNLSSDLLMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS 771
+D L + D RQ ALK++ANS+YG G + ++A VT+ GR ++ TK
Sbjct: 747 ---ETDPLRKRVLDGRQLALKISANSVYGFTGAQVGKLPCLEISASVTSFGRLMIEQTKL 803
Query: 772 LVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELD 821
VE + VIYGDTDS+M V+ ++G Q ++ + K + L+
Sbjct: 804 HVEKKFTIANGYKHDAVVIYGDTDSVMCKFGVSTVTEAMELGRQAAEIISEEFPKPIRLE 863
Query: 822 IDGVYKYMLLLKKKKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQ 880
+ VY LL+ KK+YA L +K + KM C KG++ VRRD S L + + +
Sbjct: 864 FEKVYCPYLLINKKRYAGLYFTKPDRHDKMDC----KGIETVRRDNSPLVANLINACLER 919
Query: 881 ILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALP 940
IL +D + + + +DL + ++ L I+K+LTK EEYT ++A
Sbjct: 920 IL---------IDRDPNAAISYAQSVISDLLCNRIDISQLVISKELTKTDEEYTGKQA-- 968
Query: 941 HVQVALRLNNTNSKKLKQ-GDTISYIICE-DGTSEAATQRAYN-IEELKNNSKLKIDVNY 997
HV++A ++ + GD + Y+I G + AA +A + + L++N + ID Y
Sbjct: 969 HVELAAKMRKRDPGSAPNLGDRVPYVITAVGGKNTAAYAKAEDPLYVLEHN--VPIDTKY 1026
Query: 998 YLSQQIHPVVTRLLEPIEG 1016
YL Q+ + R+ EPI G
Sbjct: 1027 YLENQLANPLLRIFEPILG 1045
>gi|124027770|ref|YP_001013090.1| DNA polymerase II [Hyperthermus butylicus DSM 5456]
gi|123978464|gb|ABM80745.1| DNA polymerase III [Hyperthermus butylicus DSM 5456]
Length = 804
Score = 166 bits (420), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 225/458 (49%), Gaps = 59/458 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+++ V G L + + G R E+ L+ A +E + ++P N+ E
Sbjct: 371 IQLSTVTGIPLDQVGVMGVGFRLEWYLIRAAYEMNELVP------NRVE----------- 413
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R + +Y G +VL+P KG ++ ++L DF+S+YP+I+ +YN+ TI V + +
Sbjct: 414 -RHEESYRGAVVLKPLKGVHENVVVL-DFSSMYPNIMIKYNVGPDTI-VDDPAECEKYGG 470
Query: 680 CEYLPE--HQV---DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
C PE H+ G + ++ L+ R+QV+ MK+ S YD RQ+ALK+
Sbjct: 471 CYVAPEVGHRFRKQPPGFFKTVLENLLRLRKQVREKMKELPPESPEYRLYDERQRALKVL 530
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
AN+ YG +G+ +R++ + A VTA GR ++L+ L +VIYGDTDSL ++ +
Sbjct: 531 ANASYGYMGWSGARWYCKRCAEAVTAWGRSLILSAIEYARKLGLKVIYGDTDSLFVTYDP 590
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICS 853
K+ I N L E+ ID +Y+ + + KK+Y L L +G++
Sbjct: 591 E------KVKKLIDYVVNVL--GFEIKIDKIYRRVFFTEAKKRYVGL----LEDGRI--- 635
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
+I G + VR DW +LA E V +L +D+ ++ I + +KK+R G
Sbjct: 636 -DIVGFEAVRGDWCELAKEVQSTVAEIVLKTG-----KIDEAIRYIRDVIKKLR----EG 685
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
+P+ L I K L+K EEY PHV A R+ + GD I Y+I
Sbjct: 686 EIPVEKLIIWKTLSKRLEEYEHEA--PHVVAARRMKEAGY-DVSPGDKIGYVIVRGAGR- 741
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ RAY +K + IDV+YY+ QI P V R+L
Sbjct: 742 -ISSRAYPYFMVKPSD---IDVDYYIDHQIVPAVLRIL 775
>gi|321470374|gb|EFX81350.1| hypothetical protein DAPPUDRAFT_317527 [Daphnia pulex]
Length = 1139
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 146/485 (30%), Positives = 238/485 (49%), Gaps = 60/485 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL E+ ++P + + GEE
Sbjct: 572 NYMEMARVTGV---PLSYLLTRGQQIKVVSQLLRKAKEQGLLMPVHK----AEAGEE--- 621
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVR 669
+ G V+EP +G+Y + I +DF+SLYPSI+ +N+C+T++ +
Sbjct: 622 -----------FEGATVIEPIRGYYSQPIATLDFSSLYPSIMMAHNLCYTSLLNPRDKDK 670
Query: 670 MLQDSDITTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+ +D I T Y + V G+LP ++ L+ +R++ K K + +D L + D
Sbjct: 671 LKEDQYIKTPAGNYFVKASVRKGLLPEILEALLAARKKAK---KDLAVETDPLRKKVLDG 727
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLN 777
RQ ALK++ANS+YG G + ++ VTA GR ++ T + VE +
Sbjct: 728 RQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFGRMMIEKTSTEVEAKFRVENGYAHD 787
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKK 836
+VIYGDTDS+M+ V+ +G + + K K + L+ + VY LL+ KK+
Sbjct: 788 AKVIYGDTDSVMVKFGVSTVAEAMVLGREAAEFVSAKFIKPINLEFEKVYFPYLLINKKR 847
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L +K KM C KG++ VRRD QL + + +IL +D
Sbjct: 848 YAGLYWTKPEQFDKMDC----KGIETVRRDNCQLVANLINTCLQKIL---------MDRD 894
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
E+ K+ +DL V ++LL ITK+LTK ++Y +++A HV++A ++ ++
Sbjct: 895 PDGALEYAKQTISDLLCNKVDISLLVITKELTKTDKDYANKQA--HVELAHKMRKRDAGT 952
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
K GD + Y+I + A +A + + NS + ID YYL Q+ + R+ EPI
Sbjct: 953 APKLGDRVPYVIVAAAKNTPAYLKAEDPIYVLENS-IPIDAQYYLENQLSKPLVRIFEPI 1011
Query: 1015 EGTDA 1019
G+ A
Sbjct: 1012 LGSKA 1016
>gi|195127716|ref|XP_002008314.1| GI13419 [Drosophila mojavensis]
gi|193919923|gb|EDW18790.1| GI13419 [Drosophila mojavensis]
Length = 1092
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 217/416 (52%), Gaps = 43/416 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS--------DIT 677
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ + +D + T
Sbjct: 570 YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLLLPGAKDKLGLSDDQVERT 629
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMK--QPNLSSDLLMQYDIRQKALKLTA 735
+ ++ G+LP ++ L+ +R++ K +K Q +L D RQ ALK++A
Sbjct: 630 PANNLFVKAELRRGLLPEILESLLAARKRAKNDLKVEQDPFKRQVL---DGRQLALKISA 686
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE----VIYGDTD 786
NS+YG G + ++ VTA GR ++ TK+ VE+ YE VIYGDTD
Sbjct: 687 NSVYGFTGAQVGKLPCLEISGSVTAYGRTMIELTKNEVESHYTRANGYENDAFVIYGDTD 746
Query: 787 SLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M++ V + ++G + +K + ++L+ + VY LL+ KK+YA L +K
Sbjct: 747 SVMVNFGVKTLERSMELGREAADLVSSKFVRPIKLEFEKVYYPYLLINKKRYAGLYFTKP 806
Query: 846 SN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
KM C KG++ VRRD S L + + ++L E+ D ++D + K
Sbjct: 807 DKYDKMDC----KGIETVRRDNSPLVANLMNSCLQKLLIERD-PDGAVD--------YAK 853
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQGDTIS 963
++ DL + ++ L ITK+L K +Y ++A HV++A ++ ++ K GD +
Sbjct: 854 QVIADLLCNRIDISQLVITKELAKT--DYAAKQA--HVELAAKMKKRDAGTAPKLGDRVP 909
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
Y+IC + A Q+A + + NS + ID NYYL QQ+ + R+ EPI G A
Sbjct: 910 YVICAAAKNTPAYQKAEDPLYVLENS-VPIDANYYLEQQLSKPLLRIFEPILGDKA 964
>gi|156041052|ref|XP_001587512.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980]
gi|154695888|gb|EDN95626.1| hypothetical protein SS1G_11504 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1106
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 214/415 (51%), Gaps = 46/415 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+Y I +DF SLYPSIIQ +N+C+TT+ + + +D D +
Sbjct: 580 YEGATVIEPTRGYYSVPIATLDFASLYPSIIQAHNLCYTTLLKKDVVEALNLEKDEDYIV 639
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 640 TPNGDMFVTTKQRKGLLTQILEELLTARKQAKRELAVETDPFKKAVL----NGRQLALKI 695
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + P+A+ T+ GR+++ TK+ VE + + +VIYGD
Sbjct: 696 SANSVYGLTGATVGKVPCLPIASSTTSYGRQMIEKTKAEVEAKYTIANGYSHDAQVIYGD 755
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ V + K+G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 756 TDSVMVKFGVKELTEAMKLGEEAAQYVSSKFIKPIKLEFEKVYYPYLLINKKRYAGLY-- 813
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+N + KG++ VRRD +L + V+ IL +D +Q +++
Sbjct: 814 -WTNPDKYDKMDTKGIETVRRDNCRLVQNVIETVLRMIL---------IDQDVQGAQDYV 863
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K +DL + ++ L ITK L KA +YT ++A HV++A R+ ++ GD +
Sbjct: 864 KDTISDLLQNKIDMSKLVITKALAKA--DYTAKQA--HVELAERMKKRDAGSAPTLGDRV 919
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+Y+I + +R+ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 920 AYVIIKGSAGAKNFERSEDPIFVLENN--VPIDTKYYLDNQLAKPLGRIFEPILG 972
>gi|348689|gb|AAA72101.1| DNA dependent DNA polymerase [Thermococcus litoralis]
Length = 774
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 221/440 (50%), Gaps = 56/440 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL + ++ + P NK + EE K R + Y GG V EP+KG ++
Sbjct: 356 EWYLLRVAYARNELAP------NKPDEEEY------KRRLRTTYLGGYVKEPEKGLWEN- 402
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL-----CEYLPEHQVDTGILPSEI 697
II +DF SLYPSII +N+ T+ ++ D+ + C+ P G +PS +
Sbjct: 403 IIYLDFRSLYPSIIVTHNVSPDTLEKEGCKNYDVAPIVGYRFCKDFP------GFIPSIL 456
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+ R+ +K MK + +L D RQ+A+KL ANS YG +G+P +R++++ A
Sbjct: 457 GDLIAMRQDIKKKMKSTIDPIEKKML---DYRQRAIKLLANSYYGYMGYPKARWYSKECA 513
Query: 756 ALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GR I + + + E ++V+Y DTD + + + K + + N K
Sbjct: 514 ESVTAWGRHYIEMTIREIEEKFGFKVLYADTDGFYATIPGEKPELIKKKAKEFLNYINSK 573
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G Y + KK+YA + G++ +G++VVRRDWS++A E
Sbjct: 574 LPGLLELEYEGFYLRGFFVTKKRYAVID----EEGRITT----RGLEVVRRDWSEIAKET 625
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ IL E S + ++++ E + K R VPL L I +Q+T+ ++Y
Sbjct: 626 QAKVLEAILKEGSVEKAV--EVVRDVVEKIAKYR-------VPLEKLVIHEQITRDLKDY 676
Query: 934 TDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLK 992
KA+ PHV +A RL K+K G ISYI+ + S + R + E + K K
Sbjct: 677 ---KAIGPHVAIAKRL-AARGIKVKPGTIISYIVLKG--SGKISDRVILLTEY-DPRKHK 729
Query: 993 IDVNYYLSQQIHPVVTRLLE 1012
D +YY+ Q+ P V R+LE
Sbjct: 730 YDPDYYIENQVLPAVLRILE 749
>gi|324120686|dbj|BAJ78734.1| DNA polymerase delta catalytic subunit [Pedetontus unimaculatus]
Length = 1035
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 244/492 (49%), Gaps = 73/492 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL EK +V+P Q
Sbjct: 464 NYMEMARVTGVS---LPSLLTRGQQIKVVSQLLRKAREKDFVIPTYQ------------- 507
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
G G + Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 508 ---GTGSDEQ-YEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTT----LLQPG 559
Query: 675 DITTLCEYLPEHQVDT-------------GILPSEIKKLVESRRQVKALMKQPN--LSSD 719
+ L + P+ ++T G+LP ++ L+ +R++ K +K+ L
Sbjct: 560 WVNKL-QLTPDRYIETPAGAMFVKASVRKGLLPEILESLLAARKKAKEDLKKETDPLRCK 618
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---- 775
+L D RQ ALK++ANS+YG G + ++ VTA GR+++ TK VEN
Sbjct: 619 VL---DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAFGRQMIEFTKQQVENKFTV 675
Query: 776 -----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQ-IKSECNKLYKQLELDIDGVYKYM 829
+ +VIYGDTDS+M+ V+ +G + + +K K ++L+ + VY
Sbjct: 676 ENGYSHDAKVIYGDTDSVMVRFGVSTVGEAMVLGKEGAEYVSSKFIKPIKLEFEKVYFPY 735
Query: 830 LLLKKKKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
LL+ KK+YA L ++ + KM C KG++ VRRD + + ++L E++
Sbjct: 736 LLINKKRYAGLYFTRPEVHDKMDC----KGIETVRRDNCPFVANIMNMCLQKLLIERN-P 790
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+ ++D ++K++ +DL V ++ L ITK+LTK+ +Y ++A HV++A ++
Sbjct: 791 NGAVD--------YVKQVISDLLCNRVDISQLVITKELTKS--DYAAKQA--HVELANKM 838
Query: 949 NNTNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
++ K GD + Y+I A +A + + NS + ID YYL Q+ +
Sbjct: 839 RKRDAGTAPKLGDRVPYVITAAAKGTPAYAKAEDPIFVLENS-VPIDAEYYLENQLSKPL 897
Query: 1008 TRLLEPIEGTDA 1019
R+ EPI G A
Sbjct: 898 LRIFEPILGDKA 909
>gi|195019160|ref|XP_001984922.1| GH16758 [Drosophila grimshawi]
gi|193898404|gb|EDV97270.1| GH16758 [Drosophila grimshawi]
Length = 1095
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 244/487 (50%), Gaps = 63/487 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL K +++P + ++
Sbjct: 522 NYMEMARVTGV---PLESLLTRGQQIKVLSQLLRKAKTKGFIMPSYTSSGSDEQ------ 572
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV-----R 669
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ + +
Sbjct: 573 -----------YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLLLPGAKDK 621
Query: 670 M-LQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
M L+D + T + ++ G+LP ++ L+ +R++ K +K + +D +
Sbjct: 622 MGLRDDQVEQTPANNRFVKAELRRGLLPEILESLLAARKRAKNDLK---VETDSFKRQVL 678
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE 779
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK+ VE+ YE
Sbjct: 679 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRVMIELTKNEVESHYTRANGYE 738
Query: 780 ----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
VIYGDTDS+M++ V + ++G + +K + ++L+ + VY LL+ K
Sbjct: 739 NDAVVIYGDTDSVMVNFGVKTLERSMELGREAADLVSSKFVRPIKLEFEKVYYPYLLINK 798
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L +K KM C KG++ VRRD S L + + ++L E++ D ++D
Sbjct: 799 KRYAGLYFTKPDKYDKMDC----KGIETVRRDNSPLVANLMNACLQKLLIERN-PDGAVD 853
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ K+I DL + ++ L ITK+L K +Y ++A HV++A ++ ++
Sbjct: 854 --------YAKQIIADLLCNRIDISQLVITKELAKT--DYAAKQA--HVELAAKMKKRDA 901
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
K GD + Y+IC + A Q+A + + NS + ID NYYL QQ+ + R+ E
Sbjct: 902 GTAPKLGDRVPYVICAATKNTPAYQKAEDPLYVLENS-VPIDANYYLEQQLSKPLLRIFE 960
Query: 1013 PIEGTDA 1019
PI G A
Sbjct: 961 PILGDKA 967
>gi|27806073|ref|NP_776852.1| DNA polymerase delta catalytic subunit [Bos taurus]
gi|118838|sp|P28339.1|DPOD1_BOVIN RecName: Full=DNA polymerase delta catalytic subunit
gi|162974|gb|AAA30493.1| DNA polymerase-delta catalytic-subunit [Bos taurus]
Length = 1106
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N ME R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 527 VLVNAMEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 577
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 578 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 624
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 625 AAQKLGLTEDQFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 681
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G R ++ VT GR+++ TK LVE
Sbjct: 682 RQVLDGRQLALKVSANSVYGFTGAQVGRLPCLEISQSVTGFGRQMIEKTKQLVETKYTVE 741
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 742 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYL 801
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 802 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 851
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 852 ---IDRDPSGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 906
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 907 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 965
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 966 LRIFEPILG 974
>gi|195997435|ref|XP_002108586.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
gi|190589362|gb|EDV29384.1| hypothetical protein TRIADDRAFT_18979 [Trichoplax adhaerens]
Length = 1050
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 241/487 (49%), Gaps = 70/487 (14%)
Query: 555 NQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N ME R+T V G +L+R G+ + LL E+ ++P + E G
Sbjct: 480 NYMEMARVTGVPLGCLLTR----GQQIKVVSQLLRYAKEEKMLMPAHK--------AEAG 527
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
+ Y+G +V+EP +G+YD I +DF+SLYPSI+Q +N+C+TT +LQ
Sbjct: 528 DD----------YTGAIVIEPVRGYYDCPIATLDFSSLYPSIMQAHNLCYTT----LLQH 573
Query: 674 SDITTLC----------EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLL 721
++ L Y + + GILP ++ L+ +R++ K +K +L
Sbjct: 574 HHLSNLSPDDYIKTPSGNYFVKKNLRAGILPKILQNLLSARKKAKFDLKNEKDPFKRKVL 633
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
D RQ ALK++ANS+YG G + ++ VTA GR+++ ++ LVE
Sbjct: 634 ---DGRQLALKISANSVYGFTGAQVGKLPCLEVSQSVTAFGRQMIEKSRQLVEERYTIKN 690
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLL 831
+ +VIYGDTDS+M+ ++ + ++G + + + + ++L+ + VY LL
Sbjct: 691 GYKFDAQVIYGDTDSVMVKFGLDTVEESMELGKEAANYISSHFPSPIKLEFEKVYFPYLL 750
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
+ KK+YA L +K + + KG++ VRRD L + + ++L
Sbjct: 751 INKKRYAGLYFTKADTYDKV---DCKGIETVRRDNCPLVANLINACLQKLL--------- 798
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D + +H+++ +DL + ++ L ITK+LT++ +EY ++A HV++A ++
Sbjct: 799 VDRNPDSAIKHVQQTISDLLCNRIDISQLIITKELTRSDDEYAGKQA--HVELAAKMRKR 856
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+ GD + Y+I AA R+ + + L+N+ + ID YYL Q+ + R
Sbjct: 857 DPSSCPTLGDRVPYVIITGARGAAAYTRSEDPVYALENS--IAIDTTYYLENQLSKPLLR 914
Query: 1010 LLEPIEG 1016
+ EPI G
Sbjct: 915 IFEPILG 921
>gi|146304901|ref|YP_001192217.1| DNA polymerase II [Metallosphaera sedula DSM 5348]
gi|145703151|gb|ABP96293.1| replicative DNA polymerase I [Metallosphaera sedula DSM 5348]
Length = 783
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 227/458 (49%), Gaps = 61/458 (13%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++T + G L + M R E+LL+ + + ++P N+ E
Sbjct: 362 QLTVISGLPLDQLCMASVGHRVEWLLMRQAKQFNELIP------NRVE------------ 403
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R+ Y GGLV+EPK G ++ +L DF+S+YPSI+ +YNI T+ D +
Sbjct: 404 RRYEGYKGGLVIEPKPGLHENVAVL-DFSSMYPSIMIKYNIGPDTLVQGECNDCWVAPEV 462
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
Y VD G S + L+E RR+ K M Q + + D RQ+ALK+ AN+MYG
Sbjct: 463 GYKFRKDVD-GFYRSILNFLLEERRKTKDQMSQAKDEYEK-RRLDERQRALKIMANAMYG 520
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
+G+ +R++++ A VTA GR+ ++ + +N +EVIYGDTDS+ + ++
Sbjct: 521 YMGWLGARWYSKEGAEAVTAWGRQTIMTAAEIAKNSGFEVIYGDTDSIFVKGDM------ 574
Query: 801 FKIGNQIKSECNKLYKQLELDI--DGVYKYMLLLK-KKKYAALSISKLSNGKMICSQEIK 857
+ ++ K+ + L+LDI D YK + + KK+YA L+ +GK+ +I
Sbjct: 575 ----SSVELLTQKIVQALDLDIKVDKKYKKVFFTENKKRYAGLTF----DGKI----DIV 622
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI-RTDLDNGFVP 916
G + +R DW +LA + + VI +IL + +DD ++ E + K+ R + +
Sbjct: 623 GFEAIRGDWCELAKDTQRMVIERILLK------GVDDAVKAAKEVIMKVKRREFE----- 671
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT 976
L + I K L K+ +EY PHV A + N ++ G I Y++ + +
Sbjct: 672 LHDIVIWKSLDKSLDEY--EVDAPHVIAAKKAINAGYAIMRNG-KIGYVVVKGAGRVSDR 728
Query: 977 QRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
Y + + K KID++YY+ +QI P V R+LEP
Sbjct: 729 VEPYFMVK----DKTKIDIDYYVEKQIIPAVMRILEPF 762
>gi|324120688|dbj|BAJ78735.1| DNA polymerase delta catalytic subunit [Petrobiellus takunagae]
Length = 1005
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 150/492 (30%), Positives = 241/492 (48%), Gaps = 73/492 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL EK +V+P Q
Sbjct: 434 NYMEMARVTGVS---LPSLLTRGQQIKVVSQLLRKAREKDFVIPTYQ------------- 477
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
G G + Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 478 ---GTGSDEQ-YEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTT----LLQPG 529
Query: 675 DITTLCEYLPEHQVDT-------------GILPSEIKKLVESRRQVKALMKQPN--LSSD 719
+ L P+ V+T G+LP ++ L+ +R++ K +K+ L
Sbjct: 530 WVNKL-GLTPDLYVETPAGSMFVKSTVRKGLLPEILESLLAARKKAKEDLKKETDPLRCK 588
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---- 775
+L D RQ ALK++ANS+YG G + ++ VTA GR+++ TK VEN
Sbjct: 589 VL---DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAFGRQMIEFTKQQVENKFCV 645
Query: 776 -----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYM 829
N +VIYGDTDS+M+ V+ +G + +K K ++L+ + VY
Sbjct: 646 ENGYSHNAKVIYGDTDSVMVRFGVSTVAEAMVLGKEGADYVSSKFIKPIKLEFEKVYFPY 705
Query: 830 LLLKKKKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
LL+ KK+YA L ++ + KM C KG++ VRRD + + ++L E++ T
Sbjct: 706 LLINKKRYAGLYFTRPDVHDKMDC----KGLETVRRDNCTFVANIMSMCLQKLLIERNPT 761
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
++D ++K++ +DL V ++ L ITK+LTK +Y ++A HV++A ++
Sbjct: 762 G-AID--------YVKQVISDLLCNRVDISQLVITKELTK--NDYAAKQA--HVELANKM 808
Query: 949 NNTNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
++ K GD + Y+I A +A + + NS + ID YYL Q+ +
Sbjct: 809 RKRDAGTAPKLGDRVPYVIVAAAKGTPAYNKAEDPIYVLENS-IPIDALYYLENQLSKPL 867
Query: 1008 TRLLEPIEGTDA 1019
R+ EPI G A
Sbjct: 868 LRIFEPILGDKA 879
>gi|403333149|gb|EJY65649.1| DNA polymerase [Oxytricha trifallax]
Length = 1272
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 214/422 (50%), Gaps = 52/422 (12%)
Query: 624 AAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQDSDI-----T 677
Y G +V+EP +GFY + ++DF SLYPSI+ +N+C++T +P L+D D+ T
Sbjct: 746 GKYEGAVVIEPIRGFYQDPVAILDFASLYPSIMMAHNLCYSTLVPPYKLKDIDVSMYERT 805
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
+Y + V G+LP +++L+++RR+VK+ +++ ++ + D RQ ALK +ANS
Sbjct: 806 PNGDYFVKKSVKKGVLPIILEELIQARRRVKSELQRTTDPYEIKI-LDSRQNALKTSANS 864
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV-------ENLNY--EVIYGDTDSL 788
+YG G + P++ VTA GR +L TK+LV E Y EVIYGDTDS+
Sbjct: 865 VYGFTGAQVGQLPCLPISCSVTAYGRRMLDMTKNLVKEKFSVKEGYQYDSEVIYGDTDSV 924
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKLSN 847
MI + +G + + ++L+ + +Y LL+ KK+YA L +
Sbjct: 925 MIKFGCKTIEETMVLGKEAAEYVTSFFADPIKLEFEKIYCPYLLMNKKRYAGLLWTNPIK 984
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
I + KG++ VRRD L + V+ +IL E+SY D + K +
Sbjct: 985 YDKI---DAKGIETVRRDNCPLVKDVVNTVLKKILVERSYEDAI---------NYCKGVI 1032
Query: 908 TDLDNGFVPLTLLEITKQLTKAP---------EEYTDRKALPHVQVALRLNNTNSKKLKQ 958
+DL + L+LL IT+ L K E Y ++A HV++A ++ +
Sbjct: 1033 SDLLQNRIDLSLLVITRGLGKKAKKINSSDDKEVYQAKQA--HVELAEKMRKRDEASAPS 1090
Query: 959 -GDTISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD I++++ + GT +A + Y E L NN L ID +YL Q+ + R+ E
Sbjct: 1091 VGDRIAFVMVK-GTKDA---KGYEKSEDPLYVLDNN--LPIDYQHYLQHQLKQPLIRIFE 1144
Query: 1013 PI 1014
PI
Sbjct: 1145 PI 1146
>gi|425777959|gb|EKV16108.1| DNA polymerase [Penicillium digitatum Pd1]
gi|425780068|gb|EKV18089.1| DNA polymerase [Penicillium digitatum PHI26]
Length = 1104
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 214/412 (51%), Gaps = 38/412 (9%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EPK+G+Y + +DF SLYPSIIQ +N+C+TT+ + + +D D +
Sbjct: 576 YEGATVIEPKRGYYGVPVATLDFASLYPSIIQAHNLCYTTLLNKSSVEKLNLKKDDDYIV 635
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
T + +V G+L +++L+ +R++ K + S + + RQ ALK++AN
Sbjct: 636 TPNGDMFCTTKVRKGLLSQILEELLSARKRAKRELATETDSFKKAV-LNGRQLALKISAN 694
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDTDS 787
S+YG G + P+A+ T+ GR+++ TK VE + + EVIYGDTDS
Sbjct: 695 SVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKQEVEARYTIANGYSHDAEVIYGDTDS 754
Query: 788 LMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
+M+ V + ++G + +K ++L+ + VY LL+ KK+YA L +
Sbjct: 755 VMVKFGVTELAEAMRLGQEAADFVSSKFIAPIKLEFEKVYFPYLLINKKRYAGLY---WT 811
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
N + KG++ VRRD + + V+++IL +D L +++K
Sbjct: 812 NPDKHDKMDTKGIETVRRDNCLMVQNVIETVLNKIL---------IDRDLDGAQDYVKAT 862
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYI 965
+DL + ++ L ITK L+K E+Y ++A HV++A R++ ++ GD ++Y+
Sbjct: 863 ISDLLQNKIDMSKLVITKALSKRKEDYAGKQA--HVELAERMHKRDAGSAPTLGDRVAYV 920
Query: 966 ICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+ + + +RA + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 921 MIKGSSDSKGYERAEDPIFVLENN--IPIDTKYYLDNQLTNPLNRIFEPILG 970
>gi|11067381|ref|NP_067694.1| DNA polymerase delta catalytic subunit [Rattus norvegicus]
gi|3913500|sp|O54747.1|DPOD1_RAT RecName: Full=DNA polymerase delta catalytic subunit
gi|2687728|emb|CAA10946.1| DNA polymerase delta, catalytic subunit [Rattus norvegicus]
Length = 1103
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 524 VLVNNVEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMREGLLMP-----VVKTEGG 574
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 575 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 621
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 622 AAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 678
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ NS+YG G + ++ VT GR+++ TK LVE
Sbjct: 679 RQVLDGRQLALKVSPNSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVETKYTLE 738
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 739 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 798
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ +M C KG++ VRRD L + + +IL
Sbjct: 799 LISKKRYAGLLFSSRSDAHDRMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 848
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 849 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 903
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 904 RKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 962
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 963 LRIFEPILG 971
>gi|392574795|gb|EIW67930.1| hypothetical protein TREMEDRAFT_69477 [Tremella mesenterica DSM 1558]
Length = 1056
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 168/608 (27%), Positives = 280/608 (46%), Gaps = 105/608 (17%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+ + L A + Y++P K EG +
Sbjct: 483 NYTEMARVTGVPFNYL---LTRGQQIKVISQLFRASADSGYIIP-----AMKSEGSDE-- 532
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
Y G V+EP KG+YD I +DF SLYPSI+ +N+C+TT+
Sbjct: 533 ----------QYEGATVIEPTKGYYDVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIER 582
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKA---LMKQPNLSSDLLM 722
+++++ D T +Y + G+LP+ ++ L+++R++ K + K P + L
Sbjct: 583 LKLVEGEDYVHTPNNDYFATTKRRKGLLPTVLRNLLDARKRAKQDLKVEKDPFRRAVL-- 640
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----N 777
D RQ ALK++ANS+YG G + +++ VTA GR+++ TK VE
Sbjct: 641 --DGRQLALKISANSVYGFTGATVGKLPCLAISSSVTAFGRQMIEFTKQQVEAEFCVANG 698
Query: 778 YE----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLL 832
YE VIYGDTDS+M+ D + ++G + + K K ++L+ + VY LL+
Sbjct: 699 YENDAKVIYGDTDSVMVRFGTPDLATAMRLGAEAAELVSAKFIKPIKLEFEKVYFPYLLI 758
Query: 833 KKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KK+YA L +K KM + KG++ VRRD +L S + + ++L
Sbjct: 759 SKKRYAGLYWTKTEKYDKM----DTKGIETVRRDNCRLVSTVIETCLFKML--------- 805
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D ++ +++K +DL + ++ L ITK L KA +Y ++A HV++A R+
Sbjct: 806 IDRDVKGAEDYVKSTISDLLQNKIDMSQLVITKALAKA--DYAAKQA--HVELAERMKKR 861
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ GD ++Y+I + AA +++ + + L++N + ID YYL Q+ + R
Sbjct: 862 DAGSAPALGDRVAYVIIKGIKGAAAYEKSEDPLYVLEHN--VPIDTRYYLENQLSKPLMR 919
Query: 1010 LLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTC 1069
+ EPI G A +L + +IQ + + G+ +F K TC
Sbjct: 920 IFEPILGEKA----------NTLLSGEHTRTIQIATPTVGGL-------MKFAVK-TVTC 961
Query: 1070 MNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKY 1129
+ CK P R + V CIN K LP L K + + +
Sbjct: 962 LG--CK------TPLRSNKESAV-----CINCRSK------LPELYAKQVAQTSTLQIDF 1002
Query: 1130 YEGWLKCE 1137
W +C+
Sbjct: 1003 ARLWTQCQ 1010
>gi|327311462|ref|YP_004338359.1| DNA polymerase II [Thermoproteus uzoniensis 768-20]
gi|326947941|gb|AEA13047.1| DNA polymerase II [Thermoproteus uzoniensis 768-20]
Length = 785
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 238/479 (49%), Gaps = 70/479 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E+LL+ + V P N++E
Sbjct: 354 IQLSSVSGVPLDQVAAASVGARVEWLLMRYAYRMGEVAP------NREE----------- 396
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ--DSDIT 677
R Y G +VLEP+ G Y +L DF S+YPSI+ +YN+ P L+ + D
Sbjct: 397 -RPYETYKGAIVLEPRPGIYQDVAVL-DFTSMYPSIMMKYNLS----PDTYLEPGEPDPP 450
Query: 678 TLCEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
PE + TG +P + LV+ R++V++ M + +S D RQ+ALK
Sbjct: 451 EGVYRAPEVGHRFRKSPTGFIPQVLASLVKLRKEVRSAMSGLDPNSVEYKLLDERQRALK 510
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
+ AN+MYG +G+ +R++ + +A VTA R ILL+ + +N VIYGDTDSL +
Sbjct: 511 IMANAMYGYMGWLGARWYKREVAESVTAFARNILLDVINFAKNTGINVIYGDTDSLFVKY 570
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMI 851
+ D D +I N + + N +E+ ++ +YK +L + KK+YA L L +G++
Sbjct: 571 S-KDID---RIINYVNDKFN-----IEIKLEKIYKKLLFTESKKRYAGL----LDDGRI- 616
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY--SLDDRLQNIHEHMKKIRTD 909
+I G +VVR DW +LA E VI L Q+ T+ + +++I ++K D
Sbjct: 617 ---DIVGFEVVRGDWCELAKEVQLKVIEYTLKSQNLTEAKDKIVSYVKSIINNIKTYNID 673
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
LD+ L I K L K +EY + PHV A +L + K+ +G +I Y+I +
Sbjct: 674 LDD-------LIIWKTLDKELDEY--KVTPPHVYAA-KLLEKHGYKIHKGMSIGYVIVKG 723
Query: 970 GTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLG 1027
++ + Y +E++K ++DV+YY+ +QI P R+ E I VR + +G
Sbjct: 724 SDKLSSRAKPYILVEDIK-----EVDVDYYIEKQIVPAALRIGEVI----GVREGDLVG 773
>gi|301087457|gb|ADK60920.1| DNA polymerase [Thermococcus celer]
Length = 774
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 213/441 (48%), Gaps = 61/441 (13%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P NK G E +G Y+GG V EP++G ++
Sbjct: 354 EWFLLRKAYERNELAP------NKPSGREVEIRRRG-------YAGGYVKEPERGLWEN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDFRSLYPSIIITHNVSPDTLNREGCENYDVAPQVGHKFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R+++K MK + LL D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 454 GGLLEERQKIKRRMKASVDPVERKLL---DYRQRAIKILANSFYGYYGYARARWYCRECA 510
Query: 756 ALVTAKGREILLNT-KSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GRE + + L E ++V+Y DTD L + D +V + N K
Sbjct: 511 ESVTAWGREYIDRVIRELEEKFGFKVLYADTDGLHATIPGADAGTVKERARGFLRYINPK 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G Y + KKKYA + GK+ +G+++VRRDWS++A E
Sbjct: 571 LPGLLELEYEGFYLRGFFVTKKKYAVID----EEGKITT----RGLEIVRRDWSEVAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR---TDLDNGFVPLTLLEITKQLTKAP 930
V+ IL R ++ E ++ +R L VP L I +Q+T+
Sbjct: 623 QARVLEAIL------------RHGDVEEAVRIVREVTEKLSKYEVPPEKLVIHEQITRDL 670
Query: 931 EEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSK 990
+Y + PHV VA RL +++ G ISYI+ + S RA +E + +K
Sbjct: 671 RDY--KATGPHVAVAKRLAGRGV-RIRPGTVISYIVLK--GSGRIGDRAIPFDEF-DPTK 724
Query: 991 LKIDVNYYLSQQIHPVVTRLL 1011
+ D +YY+ Q+ P V R+L
Sbjct: 725 HRYDADYYIENQVLPAVERIL 745
>gi|324120762|dbj|BAJ78772.1| DNA polymerase delta catalytic subunit [Papilio polytes]
Length = 1082
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 235/486 (48%), Gaps = 63/486 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L G+ + LL E Y++P
Sbjct: 512 NSMEMARVTGVPLVCLQTR---GQQIKVVSQLLRKAKEAGYLIP---------------- 552
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQD 673
A G+G + G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT +P M +D
Sbjct: 553 AYHGQGSDDQ-FEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLVPPNMQKD 611
Query: 674 SD-----ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALM---KQPNLSSDLLMQYD 725
+ IT + + G+LP ++ L+ +R++ KA + K P S L D
Sbjct: 612 LNSDDITITPTKNMFVKSNIRKGLLPEILESLLAARKKAKADLKDEKDPFKRSVL----D 667
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-----NLNYE- 779
RQ ALK++ANS+YG G + ++ VTA GR ++ TKS VE + Y+
Sbjct: 668 GRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEFTKSEVEKKYTKSNGYKE 727
Query: 780 ---VIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKK 835
VIYGDTDS+M+ V + ++G + +K ++L+ + VY LL+ KK
Sbjct: 728 DAVVIYGDTDSVMVKFGVKTLEESMELGREAAEFVTSKFVXPIKLEFEKVYYPYLLINKK 787
Query: 836 KYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
+YA L ++ KM C KG++ VRRD S L S + ++L +D
Sbjct: 788 RYAGLYFTRPDKYDKMDC----KGIETVRRDNSPLVSNMMSTCLQKLL---------IDR 834
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ + K+I +DL + ++ L ITK+LTK +Y ++A HV++A ++ +
Sbjct: 835 DPEGAVNYAKQIISDLLCNRIDISQLVITKELTK--NDYAAKQA--HVELAAKMKKRDPG 890
Query: 955 KL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y++C + A +A + + NS + ID NYYL Q+ + R+ EP
Sbjct: 891 TAPKLGDRVPYVLCCAAKNTPAYMKAEDPIYVLENS-VPIDFNYYLENQLSKPLLRIFEP 949
Query: 1014 IEGTDA 1019
I G A
Sbjct: 950 ILGDKA 955
>gi|325193152|emb|CCA27509.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1084
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 228/482 (47%), Gaps = 50/482 (10%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I + VCG + L G+ + +LL + ++P Q +N G+
Sbjct: 507 IEMARVCGVPIDYLLERGQQIKVYSMLLRKCKGANLLVPTLQRSQNANSGD--------- 557
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
A Y G V+EP K +Y I +DF SLYPSI+Q +N+C++T+ D D
Sbjct: 558 ----AGYEGATVIEPIKAYYTVPIATLDFASLYPSIMQAHNLCYSTLVAP--NDVDKLNP 611
Query: 680 CEYLPEHQVDT--------GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+Y D GILP I++L+ +R+Q K M + + +Q + RQ AL
Sbjct: 612 LQYQTSPSGDVFVKADTRKGILPMIIEELLSARKQAKYDMSRATDPMEKAVQ-NGRQLAL 670
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIY 782
K++ANS+YG G + P+A+ +TA GR+ L TK VE + +VIY
Sbjct: 671 KISANSVYGFTGAVVGQLPCIPIASSITAYGRQFLFQTKEEVERQFCVANGYPADAQVIY 730
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+M+ V + + S + ++ + L+ + VY LL+ KK+YA L
Sbjct: 731 GDTDSVMVKFGVETVAEAMPLAKEAASRVSSIFPSPILLEFEKVYFPYLLMNKKRYAGLL 790
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ + + S KG++ VRRD L + + +IL +Q+ + E
Sbjct: 791 WTNADKYEKVDS---KGLETVRRDNCLLVRRLVETCLDKILIQQN---------VAGAIE 838
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK-QGD 960
+ K + +DL + ++LL ITK L K ++ + H ++A R+ ++ G+
Sbjct: 839 YTKSMISDLLQNRIDISLLVITKGLKKLVDQRDYKVKQAHTELAERMRKRDAGSAPVLGE 898
Query: 961 TISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
I+Y+I G + ++A + + L+N+ + ID YY+ QQ+ + R+ EPI G
Sbjct: 899 RIAYVIVNKGKTAPLYEKAEDPVYVLEND--IPIDWEYYMKQQLQNPLERIFEPIIGLAR 956
Query: 1020 VR 1021
VR
Sbjct: 957 VR 958
>gi|10799869|emb|CAC12847.1| DNA polymerase [Pyrococcus sp. ST700]
Length = 759
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 223/440 (50%), Gaps = 58/440 (13%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P+K ++KE E+ R + +Y GG V EP+KG ++
Sbjct: 354 EWFLLRKAYERNELAPNKP---DEKEYEK---------RLRESYEGGYVKEPEKGLWEG- 400
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ D C+ P G +PS +
Sbjct: 401 IVSLDFRSLYPSIIITHNVSPDTLNREGCGKYDEAPEVGHRFCKDFP------GFIPSLL 454
Query: 698 KKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R+++K MK+ + LL D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 455 GDLLEERQKIKKRMKESKDPIEKKLL---DYRQRAIKILANSFYGYYGYAKARWYCKECA 511
Query: 756 ALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC-NVNDYDSVFKIGNQIKSECN-K 813
VTA GR+ + + +E ++V+Y DTD L + +++ + + + + N K
Sbjct: 512 ESVTAWGRQYIELVRRELEERGFKVLYIDTDGLYATIPGEKNWEEIKRKALEFVNYINSK 571
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G Y + KKKYA + GK+I +G+++VRRDWS++A E
Sbjct: 572 LPGILELEYEGFYTRGFFVTKKKYALID----EEGKIIT----RGLEIVRRDWSEIAKET 623
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ IL + ++ + +K++ L N +P+ L I +Q+T+ EY
Sbjct: 624 QAKVLEAILKHGN---------VEEAVKIVKEVTEKLSNYEIPVEKLVIYEQITRPLNEY 674
Query: 934 TDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEAATQRAYNIEELKNNSKL 991
KA+ PHV VA RL K+K G I Y++ DG ++RA IEE + K
Sbjct: 675 ---KAIGPHVAVAKRL-AAKGIKIKPGMVIGYVLLRGDG---PISKRAIAIEEF-DGKKH 726
Query: 992 KIDVNYYLSQQIHPVVTRLL 1011
K D YY+ Q+ P V R+L
Sbjct: 727 KYDAEYYIENQVLPAVERIL 746
>gi|345564490|gb|EGX47452.1| hypothetical protein AOL_s00083g388 [Arthrobotrys oligospora ATCC
24927]
Length = 1099
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 241/489 (49%), Gaps = 66/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +FL L E+S V+P++
Sbjct: 518 NYAEMARVTGVPFNFLL-----ARGQQVKFLSQLFRKAGEQSLVVPNR------------ 560
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP----- 667
E G G + Y G V+EP +GFY + + +DF SLYPSI+ +N+C+TT+
Sbjct: 561 -EQKVGGGGDEEQYEGATVIEPTRGFYKEPVATLDFASLYPSIMMAHNLCYTTLTKQEHM 619
Query: 668 ----VRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDL 720
++ +D +T + V G+L + + L+ +R++ K +K P + L
Sbjct: 620 DKMGMKEGEDYHVTPTGDVFVNTSVRKGLLVTIFEDLLGARKRAKNDLKNETDPFKKAVL 679
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G N + +A+ T+ GRE++ TK+ VE
Sbjct: 680 ----NGRQLALKISANSVYGLTGATNGKLPCLAIASSCTSYGREMIEATKAEVEKRYTIA 735
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYML 830
+ + +VIYGDTDS+M+ D V +G + + +K ++L+ + VY L
Sbjct: 736 NGYSHDAQVIYGDTDSVMVKFGPKDLKKVMAMGEEAAAFVSSKFINPIKLEFEKVYFPYL 795
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L +N + KG++ VRRD +L + V+ +IL +Q
Sbjct: 796 LINKKRYAGLY---WTNPNKYDKMDSKGIETVRRDNCRLVQTVIETVLKKILIDQD---- 848
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D Q ++K + +DL V ++ L ITK L+K EEY ++A HV++A R+
Sbjct: 849 --EDGAQ---AYVKDMISDLLQNKVDMSNLVITKALSK--EEYAAKQA--HVELAERMRK 899
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I + +++ + I L++N + ID YYL QQ+ +
Sbjct: 900 RDAGSAPTLGDRVAYVIVKGAGGAKNYEKSEDPIYVLEHN--VPIDTKYYLEQQLAKPLH 957
Query: 1009 RLLEPIEGT 1017
R+ EPI G
Sbjct: 958 RIFEPILGA 966
>gi|296477407|tpg|DAA19522.1| TPA: DNA polymerase delta catalytic subunit [Bos taurus]
Length = 987
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N ME R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 527 VLVNAMEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 577
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 578 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 624
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 625 AAQKLGLTEDQFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 681
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G R ++ VT GR+++ TK LVE
Sbjct: 682 RQVLDGRQLALKVSANSVYGFTGAQVGRLPCLEISQSVTGFGRQMIEKTKQLVETKYTVE 741
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 742 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYL 801
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 802 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 851
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 852 ---IDRDPSGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 906
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 907 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 965
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 966 LRIFEPILG 974
>gi|347826748|emb|CCD42445.1| similar to Similar to dna polymerase delta catalytic subunit (ec
2.7.7.7) [Botryotinia fuckeliana]
Length = 616
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 215/415 (51%), Gaps = 46/415 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+Y I +DF SLYPSIIQ +N+C+TT+ +++ +D D +
Sbjct: 90 YEGATVIEPTRGYYSVPIATLDFASLYPSIIQAHNLCYTTLLKKDVVEALKLEKDEDYIV 149
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 150 TPNGDMFVTTKQRKGLLTQILEELLTARKQAKRELAVETDPFKKAVL----NGRQLALKI 205
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + P+A+ T+ GR+++ TK+ VE + + +VIYGD
Sbjct: 206 SANSVYGLTGATVGKVPCLPIASSTTSYGRQMIEKTKAEVEAKYTIANGYSHDAQVIYGD 265
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ V + K+G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 266 TDSVMVKFGVKELAEAMKLGEEAAQYVSSKFIKPIKLEFEKVYYPYLLINKKRYAGLY-- 323
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+N + KG++ VRRD +L + V+ IL +D +Q +++
Sbjct: 324 -WTNPDKYDKMDTKGIETVRRDNCRLVQNVIETVLRMIL---------IDQDVQGAQDYV 373
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K +DL + ++ L ITK L KA +YT ++A HV++A R+ ++ GD +
Sbjct: 374 KDTISDLLQNKIDMSKLVITKALAKA--DYTAKQA--HVELAERMKKRDAGSAPTLGDRV 429
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+Y+I + +R+ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 430 AYVIIKGSAGAKNFERSEDPIFVLENN--VPIDTKYYLDNQLAKPLGRIFEPILG 482
>gi|68063595|ref|XP_673793.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491898|emb|CAI02404.1| hypothetical protein PB300723.00.0 [Plasmodium berghei]
Length = 580
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 229/436 (52%), Gaps = 47/436 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSDITTLC 680
+ G VLEP KG+Y + I +DF SLYPSI+ +N+C++T+ + L +DITT+
Sbjct: 63 FEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKNNDEISDLNKNDITTVP 122
Query: 681 E----YLPEHQVDTGILPSEIKKLVESRRQVKALMK-QPNLSSDLLMQYDIRQKALKLTA 735
+ V G+LP +++L+ +R+ VKA+MK + N + +++ + RQ ALK++A
Sbjct: 123 GKNNFKFVKGNVKRGVLPLIVEELIRARKNVKAMMKNEQNPITKMVL--NGRQLALKISA 180
Query: 736 NSMYGCLG-FPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGDT 785
NS+YG G + +A +T GR ++ TK VE N V+YGDT
Sbjct: 181 NSVYGYTGAAAGGQLPCLEIATSITTFGRSMIEKTKETVEAYYCKNNGFEHNATVVYGDT 240
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ ND ++G +K + ++L+ + VY LLL KK+YA L +
Sbjct: 241 DSVMVKFGTNDVGEAMRLGKDAAERISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYTN 300
Query: 845 LS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ + KM C KG++ VRRD+ L + + V++++L E+ L + E+
Sbjct: 301 PNKHDKMDC----KGIETVRRDFCILIQQMMETVLNKLLIEKD---------LNSAIEYT 347
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K DL + ++LL +TK L KA EY R LPHV++A +L +S GD +
Sbjct: 348 KSKIKDLLTNNIDMSLLVVTKSLGKA--EYETR--LPHVELAKKLKQRDSATAPNVGDRV 403
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI-EGTDAV 1020
SYII + +A +RA + + L NN L ID N+YL +P ++R+ E I + +D++
Sbjct: 404 SYIIIKGTKGQAQYERAEDPLYVLDNN--LSIDHNHYLDAIKNP-LSRIFEVIMQNSDSL 460
Query: 1021 RIAECLGLDTSLYRSQ 1036
E T L SQ
Sbjct: 461 FCGEHTRHKTILTSSQ 476
>gi|428673126|gb|EKX74039.1| DNA polymerase delta catalytic subunit, putative [Babesia equi]
Length = 1030
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/447 (31%), Positives = 225/447 (50%), Gaps = 69/447 (15%)
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML 671
TG N +A Y GG VL+P++G++ + I ++DF SLYPSI+ +N+C++T ++
Sbjct: 537 TGSRN---ASNEAGYEGGTVLDPQRGYHKQPIAVLDFQSLYPSIMIAHNLCYST----LI 589
Query: 672 QDSDITTLCEYLPEH---------------QVDTGILPSEIKKLVESRRQVKALMKQ--- 713
S++ +Y PEH V TG+LP + L+E+R++ K LM
Sbjct: 590 PTSEVD---KYPPEHVTRVPGHEGLCFIKSSVRTGVLPIIVSNLIEARKRAKKLMASCTD 646
Query: 714 PNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFF-AQPLAALVTAKGREILLNTKSL 772
P L S YD RQ ALK+T NS+YG G + F +A +T+ GR ++LNTK
Sbjct: 647 PMLKS----VYDGRQLALKITTNSVYGYTGAASGGFLPCVEVATAITSFGRSMILNTKQS 702
Query: 773 VEN---------LNYEVIYGDTDSLMISCNVNDYDSVFKIG----NQIKSECNKLYKQLE 819
+E+ N +V+YGDTDS+MI+ + + ++G +I SE K +
Sbjct: 703 IESHFTAENGYIANAKVVYGDTDSVMINFGTDKIEKAIELGIEAAAKITSEAT---KPIT 759
Query: 820 LDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVIS 879
L + VY+ +LLL KK+YA L S + + I + KG++ VRRD+ L
Sbjct: 760 LVFEKVYRPLLLLNKKRYAGLFYSNATTYEKI---DCKGIETVRRDFCPLV--------- 807
Query: 880 QILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKAL 939
Q + E+ +D L+ + +K ++L + ++LL +TK L K EY R L
Sbjct: 808 QQMMERVLHLLLVDLDLEGAIKFVKSKISELLRNEIDISLLVVTKSLGKV--EYDTR--L 863
Query: 940 PHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYY 998
PHV++A +L + K GD +SYII + + RA + N+ L ID +Y
Sbjct: 864 PHVELAKKLKQRDPGKAPGVGDRVSYIIVKGTKGQPQFDRAEEPLYVAENN-LPIDTQHY 922
Query: 999 LSQQIHPVVTRLLEPI-EGTDAVRIAE 1024
L + I + R+ E I TD++ E
Sbjct: 923 L-ESIKSTLMRVFEVIMSNTDSLFSGE 948
>gi|384486877|gb|EIE79057.1| hypothetical protein RO3G_03762 [Rhizopus delemar RA 99-880]
Length = 1059
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 220/418 (52%), Gaps = 46/418 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQ--DSDI 676
Y G V++P+KG+YD I +DF SLYPSI+Q +N+C+TT+ + +++ D ++
Sbjct: 535 YEGATVIDPEKGYYDVPITTLDFTSLYPSIMQAHNLCYTTLLKPEVAQRLGLVKGVDYEV 594
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKL 733
T + + G+LP + L+ +R++ K +K+ P + L D RQ ALK+
Sbjct: 595 TPNNDLFVKATRRKGLLPEILSDLLSARKRAKNDLKKEKDPFKRAVL----DGRQLALKI 650
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGD 784
+ANS+YG G + +++ VTA GR +++ TK VE+ + +VIYGD
Sbjct: 651 SANSVYGFTGATVGKLPCLQISSSVTAYGRGMIIKTKETVEDHFSKKNGYKHDAKVIYGD 710
Query: 785 TDSLMISCNVNDYDSVFKIGNQ-IKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+MI V++ ++G + K K + + LD + VY LL+ KK+YA L +
Sbjct: 711 TDSVMIKFGVDNLKEAMQLGRESAKLVTEKFIRPINLDFEKVYFPYLLISKKRYAGLYWT 770
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ + + KG++ VRRD +L S VIS+ LD+ + + E +
Sbjct: 771 REDKYDKL---DAKGIETVRRDNCRLVSN----VISKCLDK-----LLVQRNVAGAQEFV 818
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K+ DL V L+ L ITK L+K+ +Y +++A HV++A R+ ++ GD +
Sbjct: 819 KQTIADLLQNKVDLSQLVITKALSKS--DYANKQA--HVELAERMRKRDAGSAPALGDRV 874
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+Y+I + G + A R+ + + L +N + ID YYL Q+ + R+ EPI G A
Sbjct: 875 AYVIIKAGNNTPAYDRSEDPLYVLDHN--IPIDTKYYLEHQLSKPLLRIFEPILGDKA 930
>gi|212530840|ref|XP_002145577.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
gi|210074975|gb|EEA29062.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
marneffei ATCC 18224]
Length = 1105
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 219/415 (52%), Gaps = 46/415 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---------PVRMLQDSDI 676
Y G V+EP +G+YD + +DF SLYPSIIQ +N+C+TT+ ++ +D +
Sbjct: 579 YEGATVIEPIRGYYDVPVATLDFASLYPSIIQAHNLCYTTLLNKHKVEHFNLKKDEDYIV 638
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + +V G+L +++L+ +R++ K A+ K P + L + RQ ALK+
Sbjct: 639 TPNGDMFCTTKVRKGLLSQILEELLGARKRAKKELAVEKDPFKKAVL----NGRQLALKV 694
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK+ VE + + +VIYGD
Sbjct: 695 SANSVYGLTGATVGKLPCLEIASSTTSYGRQMIEKTKAEVEAKYTIANGYSHDAQVIYGD 754
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ V + K+G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 755 TDSVMVKFGVRTLEEAMKLGEEAADYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLY-- 812
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+N K + KG++ VRRD +L + V+++IL +D + +++
Sbjct: 813 -WTNTKKYDKMDTKGIETVRRDNCRLVQTVIETVLNKIL---------IDRDINGAQDYV 862
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K + +DL V L+ L ITK L+K+ +YT ++A HV++A R+ ++ GD +
Sbjct: 863 KNMISDLLQNKVDLSKLVITKALSKS--DYTAKQA--HVELAERMRKRDAGSAPTLGDRV 918
Query: 963 SYIICED-GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+Y+I + G S+ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 919 AYVIVKGAGGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLANPLGRIFEPILG 971
>gi|194749801|ref|XP_001957325.1| GF10365 [Drosophila ananassae]
gi|190624607|gb|EDV40131.1| GF10365 [Drosophila ananassae]
Length = 1092
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 239/494 (48%), Gaps = 67/494 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL K +++P
Sbjct: 515 NYMEMARVTGV---PLESLLTRGQQIKVMSQLLRKARTKGFIMPSY-------------- 557
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV------ 668
++G + + G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ +
Sbjct: 558 TSQGSDEQ---FEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLVLGGTREK 614
Query: 669 ----RMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
LQD + T Y + +V G+LP ++ L+ +R++ K +K + +D
Sbjct: 615 LREQENLQDDQVERTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK---VETDPFK 671
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
+ D RQ ALK++ANS+YG G + ++ VTA GR ++ TK+ VE+
Sbjct: 672 RKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEMTKNEVESHYTQA 731
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYML 830
N VIYGDTDS+M++ V + ++G + +K ++L+ + VY L
Sbjct: 732 NGYESNALVIYGDTDSVMVNFGVKTLERSMELGREAAELVSSKFVHPIKLEFEKVYYPYL 791
Query: 831 LLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
L+ KK+YA L ++ KM C KG++ VRRD S L + + ++L E+ D
Sbjct: 792 LINKKRYAGLYFTRPETYDKMDC----KGIETVRRDNSPLVANLMNTCLQKLLIERD-PD 846
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
++ + K++ DL + ++ L ITK+L K +Y ++A HV++A ++
Sbjct: 847 GAV--------AYAKQVIADLLCNRIDISHLVITKELAKT--DYAAKQA--HVELAAKMK 894
Query: 950 NTNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ K GD + Y+IC + A Q+A + + NS + ID YYL QQ+ +
Sbjct: 895 KRDPGTAPKLGDRVPYVICAAAKNTPAYQKAEDPLYVLENS-VPIDATYYLEQQLAKPLL 953
Query: 1009 RLLEPIEGTDAVRI 1022
R+ EPI G A I
Sbjct: 954 RIFEPILGEKAESI 967
>gi|83282608|ref|XP_729844.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii
17XNL]
gi|23488820|gb|EAA21409.1| DNA polymerase delta catalytic subunit [Plasmodium yoelii yoelii]
Length = 1097
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 229/436 (52%), Gaps = 47/436 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSDITTLC 680
+ G VLEP KG+Y + I +DF SLYPSI+ +N+C++T+ + L +DITT+
Sbjct: 580 FEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKNNDEISDLNKNDITTVP 639
Query: 681 E----YLPEHQVDTGILPSEIKKLVESRRQVKALMK-QPNLSSDLLMQYDIRQKALKLTA 735
+ V G+LP +++L+ +R+ VKA+MK + N + +++ + RQ ALK++A
Sbjct: 640 GKNNFKFVKGNVKRGVLPLIVEELIRARKNVKAMMKNEQNPITKMVL--NGRQLALKISA 697
Query: 736 NSMYGCLG-FPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGDT 785
NS+YG G + +A +T GR ++ TK VE N V+YGDT
Sbjct: 698 NSVYGYTGAAAGGQLPCLEIATSITTFGRSMIEKTKETVEAYYCKNNGFEHNATVVYGDT 757
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ ND ++G +K + ++L+ + VY LLL KK+YA L +
Sbjct: 758 DSVMVKFGTNDVGEAMRLGKDAAERISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYTN 817
Query: 845 LS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ + KM C KG++ VRRD+ L + + V++++L E+ L + E+
Sbjct: 818 PNKHDKMDC----KGIETVRRDFCILIQQMMETVLNKLLIEKD---------LNSAIEYT 864
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K DL + ++LL +TK L KA EY R LPHV++A +L +S GD +
Sbjct: 865 KSKIKDLLTNNIDMSLLVVTKSLGKA--EYETR--LPHVELAKKLKQRDSATAPNVGDRV 920
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI-EGTDAV 1020
SYII + +A +RA + + L NN L ID N+YL +P ++R+ E I + +D++
Sbjct: 921 SYIIIKGTKGQAQYERAEDPLYVLDNN--LSIDHNHYLDAIKNP-LSRIFEVIMQNSDSL 977
Query: 1021 RIAECLGLDTSLYRSQ 1036
E T L SQ
Sbjct: 978 FCGEHTRHKTILTSSQ 993
>gi|242817379|ref|XP_002486944.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
gi|218713409|gb|EED12833.1| DNA polymerase delta catalytic subunit Cdc2, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1106
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 218/415 (52%), Gaps = 46/415 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---------PVRMLQDSDI 676
Y G V+EP +G+YD + +DF SLYPSIIQ +N+C+TT+ ++ +D +
Sbjct: 580 YEGATVIEPVRGYYDVPVATLDFASLYPSIIQAHNLCYTTLLNQKKVEHFNLKKDEDYIV 639
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + +V G+L +++L+ +R++ K A+ K P + L + RQ ALK+
Sbjct: 640 TPNGDMFCTTKVRKGLLSQILEELLSARKRAKRELAVEKDPFKKAVL----NGRQLALKV 695
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK+ VE + + +VIYGD
Sbjct: 696 SANSVYGLTGATVGKLPCLEIASSTTSYGRQMIEKTKAEVEAKYTIANGYSHDAQVIYGD 755
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ V + K+G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 756 TDSVMVKFGVRTLEEAMKLGEEAAEYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLY-- 813
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+N K + KG++ VRRD +L + V+++IL +D + E++
Sbjct: 814 -WTNTKKYDKMDTKGIETVRRDNCRLVQTVIETVLNKIL---------IDRDVNGAQEYV 863
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K +DL + ++ L ITK L+K+ +YT ++A HV++A R+ ++ GD +
Sbjct: 864 KNTISDLLQNKIDMSKLVITKALSKS--DYTAKQA--HVELAERMRKRDAGSAPTLGDRV 919
Query: 963 SYIICED-GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+Y+I + G S+ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 920 AYVIVKGAGGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLANPLGRIFEPILG 972
>gi|324120720|dbj|BAJ78751.1| DNA polymerase delta catalytic subunit [Euborellia plebeja]
Length = 1078
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 241/489 (49%), Gaps = 63/489 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL + +++P ++
Sbjct: 510 NYMEMSRVTGVS---LASLLTRGQQVKVVSQLLRHAKPRGFLMPSHTSAGQDEQ------ 560
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPV---RM 670
+ G V+EP++G+Y K I +DF+SLYPSI+ +N+C+TT +PV +
Sbjct: 561 -----------FEGATVIEPRRGYYAKPIATLDFSSLYPSIMMAHNLCYTTLVPVAKRNI 609
Query: 671 LQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+Q I T + + V G+LP ++ L+ +R+Q KA +K+ +D + D
Sbjct: 610 VQPDQITQTPANNFFVKSTVRKGLLPEILESLLAARKQAKADLKK---ETDPFRKQVLDG 666
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---NL------N 777
RQ ALK++ANS+YG G R +++ VTA GR+++ TK VE N+ +
Sbjct: 667 RQLALKISANSVYGFTGAQVGRLPCLEISSSVTAYGRQMIERTKQEVEAKYNIANGYPHD 726
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+M+ V D ++G + +K K ++L+ + VY LL+ KK+
Sbjct: 727 SMVIYGDTDSVMVQFGVEDIREAMRLGKEAADFVSDKFIKPIKLEFEKVYYPYLLINKKR 786
Query: 837 YAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ + KM C KG++ VRRD L + + ++L +D
Sbjct: 787 YAGLYFTRPEKHDKMDC----KGIETVRRDNCPLVASIMNKSLEKLL---------VDRD 833
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
+K++ +DL + ++ L +TK+L +A +Y ++A HV++A ++ ++
Sbjct: 834 PDGAVAFVKQMISDLLCNRIDISQLVVTKELARA--DYAGKQA--HVELANKMKKRDAGT 889
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + Y+ + A + + I L+NN + ID NYYL Q+ + R+ EP
Sbjct: 890 APKLGDRVPYVFIAGAKNTPAYLKVEDPIYVLENN--IPIDFNYYLENQLSKPLLRIFEP 947
Query: 1014 IEGTDAVRI 1022
I G A I
Sbjct: 948 ILGDRAESI 956
>gi|431920730|gb|ELK18503.1| DNA polymerase delta catalytic subunit [Pteropus alecto]
Length = 1109
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 235/491 (47%), Gaps = 63/491 (12%)
Query: 549 KYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE 608
+ V N ME R+T V LS L G+ + LL + ++P K E
Sbjct: 525 RLMVLVNAMEMARVTGV---PLSYLLARGQQVKVVSQLLRQAMREGLLMP-----VVKTE 576
Query: 609 GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-- 666
G E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 GGED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLR 623
Query: 667 -----PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL 720
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D
Sbjct: 624 PGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAR---ETDP 680
Query: 721 LMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---- 774
L + D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 681 LRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYT 740
Query: 775 -----NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKY 828
+ N +V+YGDTDS+M V+ +G + + + + L+ + VY
Sbjct: 741 IESGYSANAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFP 800
Query: 829 MLLLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS 886
LL+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 801 YLLISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL---- 852
Query: 887 YTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVAL 946
+D + H++ + +DL + ++ L ITK+LT+A +Y ++A HV++A
Sbjct: 853 -----IDRDPKGAVAHVQDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAE 905
Query: 947 RLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHP 1005
R+ + GD + Y+I AA ++ + + +S L +D YYL QQ+
Sbjct: 906 RMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPVDTQYYLEQQLAK 964
Query: 1006 VVTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 965 PLLRIFEPILG 975
>gi|324120718|dbj|BAJ78750.1| DNA polymerase delta catalytic subunit [Oyamia lugubris]
Length = 1111
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 231/493 (46%), Gaps = 74/493 (15%)
Query: 555 NQMEKIRITNVC-GNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N ME R+T V G++L+R G+ + LL EK Y++P Q+ E
Sbjct: 539 NYMEMARVTGVSLGSLLTR----GQQIKVVSQLLRKAKEKGYLMPTYQHSGGGDE----- 589
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD 673
+ G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT L
Sbjct: 590 -----------QFEGATVIEPRKGYYSDPIATLDFSSLYPSIMMAHNLCYTT-----LLQ 633
Query: 674 SDITTLCEYLPEHQVDT-------------GILPSEIKKLVESRRQVKALMKQPNLSSDL 720
I E P+ V T G+LP ++ L+ +R+ K +KQ +D
Sbjct: 634 GGIKEKLELTPDQYVKTPAGNFFVTAAVRKGLLPEVLESLLAARKHAKEELKQ---ETDP 690
Query: 721 LMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-- 776
Q D RQ ALK++ANS+YG G + +++ VTA GR ++ TK VE
Sbjct: 691 FRQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISSSVTAYGRTMIEQTKQEVEQKYS 750
Query: 777 ---NYE----VIYGDTDSLMISCNVNDYDSVFKIGNQ-IKSECNKLYKQLELDIDGVYKY 828
YE VIYGDTDS+M+ V + ++G + K K ++L+ + VY
Sbjct: 751 VTNGYEHDAMVIYGDTDSVMVKFGVKTLEEAMELGREAAKFVSEKFVNPIKLEFEKVYFP 810
Query: 829 MLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY 887
LL+ KK+YA L ++ KM C KG++ VRRD L + ++L
Sbjct: 811 YLLINKKRYAGLYFTRPDKYDKMDC----KGIETVRRDNCPLVVNVMNMCLQKLL----- 861
Query: 888 TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR 947
D D L + K++ +DL V ++ L +TK+L K + Y ++A HV++A +
Sbjct: 862 IDRDPDGALL----YAKQVISDLLCNRVDISQLVVTKELAK--QNYAAKQA--HVELAAK 913
Query: 948 LNNTNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPV 1006
+ + K GD + Y+I + A +A + + NS + ID YYL Q+
Sbjct: 914 MRKRDPGTAPKIGDRVPYVIISAAKNTPAYAKAEDPIYVLENS-IPIDSTYYLENQLSQP 972
Query: 1007 VTRLLEPIEGTDA 1019
+ R+ EPI G A
Sbjct: 973 LLRIFEPILGEKA 985
>gi|402223554|gb|EJU03618.1| hypothetical protein DACRYDRAFT_93925 [Dacryopinax sp. DJM-731 SS1]
Length = 1097
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 158/550 (28%), Positives = 262/550 (47%), Gaps = 85/550 (15%)
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
A K +G + Y G V+EP+KG+YD I +DF+SLYPSI+ +N+C+TT+ + D
Sbjct: 562 AVKSEGSDEVQYEGATVIEPEKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLTKETIDR 621
Query: 675 -DITTLCEYL--PEHQV------DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
++ +Y+ P H G+LP+ ++ L+ +R++ KA +K+ +D +
Sbjct: 622 LNLVEGVDYVKTPNHDYFVTPTRRKGLLPTVLEDLITARKRAKADLKK---ETDPFKRAV 678
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------- 775
D RQ ALK++ANS+YG G + +++ VTA GR+++ TK VE
Sbjct: 679 LDGRQLALKISANSVYGFTGATIGKLPCLAISSSVTAYGRDMIEQTKQEVEKEYCIASGK 738
Query: 776 -LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
+ +VIYGDTDS+M+ D + +G + K + ++L+ + VY LL+
Sbjct: 739 EWDAKVIYGDTDSVMVRFGCPDLKTAMALGAEAAEIITAKFVRPIKLEFEKVYFPYLLIS 798
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L +K + S KG++ VRRD +L + + ++L E+
Sbjct: 799 KKRYAGLYWTKAEKWDKMDS---KGIETVRRDNCRLVQTVIETCLHKMLIERD------- 848
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ E+ K+ +DL + ++ L ITK LTK E+Y ++A H ++ R+ +
Sbjct: 849 --VDGAIEYTKQTISDLLQNKIDMSQLVITKALTK--EDYAAKQA--HSELVKRMKQRDV 902
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPVV 1007
GD ++Y+I + GT +AA AY E L+NN + ID YYL Q+ +
Sbjct: 903 GSAPALGDRVAYVIIK-GTKDAA---AYEKSEDPLYVLENN--VPIDTRYYLDNQLSNPL 956
Query: 1008 TRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEF 1067
R+ EPI G A SL + SIQ + + G+ +F +
Sbjct: 957 MRIFEPILGEKA----------KSLLAGEHTRSIQIATPTVGGL-------MKFAVR-TV 998
Query: 1068 TCMNPSCKQVNTVEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIV 1127
TC+ CK + A + +G V C N C+ + LP L K + + V
Sbjct: 999 TCLG--CK--TPMRANNSKNPNGAV-----CNN--CR----SRLPELYQKQASTTSGLQV 1043
Query: 1128 KYYEGWLKCE 1137
+ W +C+
Sbjct: 1044 HFARLWTQCQ 1053
>gi|324120692|dbj|BAJ78737.1| DNA polymerase delta catalytic subunit [Thermobia domestica]
Length = 1097
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 238/488 (48%), Gaps = 65/488 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL EK +V+P Y +E +
Sbjct: 525 NYMEMARVTGV---PLSSLLTRGQQIKVVSQLLRKAREKDFVIP--TYSGTTQEEQ---- 575
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G V+EPKKG+YD I +DF+SLYPSI+ +N+C+T++ +++
Sbjct: 576 -----------YEGATVIEPKKGYYDIPIATLDFSSLYPSIMMAHNLCYTSLLQPGMKEK 624
Query: 675 --------DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
T + + V G+LP ++ L+ +R++ KA +K +D L +
Sbjct: 625 LGLTPDQYTRTPAGNFFIKPSVRKGLLPEILENLLAARKKAKADLKN---ETDPLRRKVL 681
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 682 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQRYCVANGYP 741
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
+ VIYGDTDS+MI + + ++G + +K K ++L+ + VY LL+ K
Sbjct: 742 HDAVVIYGDTDSVMIKFGIKTLEEAMELGKEAAEYVSSKFIKPIKLEFEKVYFPYLLISK 801
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L +K KM C KG++ VRRD L + + ++L + D +L
Sbjct: 802 KRYAGLYFTKTDTYDKMDC----KGLETVRRDNCPLVANMMNTCLQKMLINRD-PDGAL- 855
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ K++ DL + ++ L +TK+LTK+ +Y ++A HV++A ++ +
Sbjct: 856 -------AYAKQVIADLLCNRIDISQLVVTKELTKS--DYAAKQA--HVELANKMKKRDP 904
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K GD + Y++ A Q+A + I L+NN + ID +YYL Q+ + R+
Sbjct: 905 GTAPKLGDRVPYVLIAAAKGTPAYQKAEDPIYVLENN--IPIDSSYYLENQLSKPLIRIF 962
Query: 1012 EPIEGTDA 1019
EP+ G A
Sbjct: 963 EPLLGDKA 970
>gi|333910025|ref|YP_004483758.1| DNA polymerase Pol2 [Methanotorris igneus Kol 5]
gi|333750614|gb|AEF95693.1| DNA polymerase Pol2 [Methanotorris igneus Kol 5]
Length = 781
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 226/460 (49%), Gaps = 47/460 (10%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+ + + L S+ E+LLL + + + P NK EE +
Sbjct: 338 VMFSRIVNQTLFEITRMSSSQMVEYLLLKNAFKNNTIAP------NKPSNEEY------Q 385
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R K +Y GG V EP +G ++ I+ DF +LYPSII +NI TI +D L
Sbjct: 386 RRLKESYEGGYVKEPIRGMHES-IVSFDFKALYPSIIISHNISPDTIDCECCKDESEKIL 444
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY---DIRQKALKLTAN 736
+ + + G++P ++ LVE R ++K MK+ ++ +Y D QK+LK+ AN
Sbjct: 445 EHWFCKKK--EGLIPKTLRNLVERRMEIKKKMKEKAKKGEIDEEYKLFDYEQKSLKILAN 502
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL--MISCNV 794
S YG L FP +R++++ A +VT GR+ + T E + VIY DTD + +
Sbjct: 503 SHYGYLAFPRARWYSKECAEVVTYLGRKYIQQTIKEAEKFGFRVIYSDTDGFYAIWKEKI 562
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
+ + + K+ + ++L +EL+ +G YK + + KK+YA + N K+
Sbjct: 563 SKDELIKKVHEFLDMINSRLPGNMELEFEGFYKRGIFVTKKRYALID----ENNKIT--- 615
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
IKG++ VRRDW+ +A + K V+ +L ++ ++ + ++ + DL G
Sbjct: 616 -IKGLEFVRRDWANIAKKTQKAVLETLL---------IEGDVEKATKIIQDVVDDLKKGK 665
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
V L I QLTK P+EY + PHV+VA R+ +L+ GD I YII ++
Sbjct: 666 VNKEDLIIYTQLTKDPKEY--KTTAPHVEVAKRILKKGG-RLRIGDVIGYIIT--SGEKS 720
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
++RA EE ++ DV YY+ QI P V R++E +
Sbjct: 721 ISERAKLPEEAED-----YDVEYYIENQILPPVLRIMEAL 755
>gi|302911020|ref|XP_003050401.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731338|gb|EEU44688.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1104
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 215/421 (51%), Gaps = 48/421 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQDSDITTLCEYLP 684
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT + + ++ + +Y+
Sbjct: 577 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVSKKAIEAFGLQKDEDYIV 636
Query: 685 EHQVDT--------GILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
DT G+L +++L+ +R+Q K A+ K P + L + RQ ALK+
Sbjct: 637 TPNGDTFVTVKQRKGLLAQILEELLAARKQAKRELAVEKDPFKKAVL----NGRQLALKI 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK VEN + +VIYGD
Sbjct: 693 SANSVYGLTGATTGKLPCLEIASSTTSFGRKMIEKTKEEVENRYNIANGYSHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQI-KSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+MI D K+G + K +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 753 TDSVMIKFGTKDLKEAMKLGEEASKYVSDKFVKPIKLEFEKVYFPYLLINKKRYAGLYWT 812
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D +Q E+
Sbjct: 813 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVQGAQEY 859
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K+ DL V ++ L ITK LTK ++Y ++A HV++A R+ ++ GD
Sbjct: 860 VKETIADLLQNKVDMSKLVITKALTK--DDYAAKQA--HVELAQRMKKRDAGSAPGLGDR 915
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y++ +++ + I L++N + ID YYL Q+ + R+ EPI G
Sbjct: 916 VAYVMVRGAAGAKNFEKSEDPIYVLEHN--VPIDTRYYLDNQLAKPLGRIFEPILGETKA 973
Query: 1021 R 1021
R
Sbjct: 974 R 974
>gi|73946992|ref|XP_851285.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Canis
lupus familiaris]
Length = 1107
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N ME R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 528 VLVNAMEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMREGLLMP-----VVKTEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 AAQKLGLTKDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYSANAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPPPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|320037710|gb|EFW19647.1| DNA polymerase delta catalytic subunit [Coccidioides posadasii str.
Silveira]
Length = 1110
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 243/487 (49%), Gaps = 68/487 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+P+ + + GEE
Sbjct: 533 NYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKALEQDLVIPNLK----NENGEEQ 583
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP K +YD I +DF SLYPSIIQ +N+C+TT+
Sbjct: 584 -------------YKGATVIEPVKDYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKTSV 630
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+++ +D D +T + +V G+L +++L+ +R++ K K+ + +D +
Sbjct: 631 EKLKLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQELLSARKRAK---KELAVETDPFKK 687
Query: 724 YDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN------ 775
+ RQ ALK++ANS+YG G N + +A+ T+ GR++++ TK VE
Sbjct: 688 AVLNGRQLALKISANSVYGITGASNGKLPCLAIASSTTSYGRQMIMKTKDEVEARFTMAN 747
Query: 776 ---LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLL 831
+ +VIYGDTDS+M+ V D K+G + + + K + ++L+ + VY LL
Sbjct: 748 GYPYDAKVIYGDTDSVMVKFGVKDIAEAMKLGQEAANFVSAKFLEPIKLEFEKVYFPYLL 807
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
+ KK+YA L +N + KG++ VRRD +L + V+ +IL
Sbjct: 808 INKKRYAGLF---WTNPNKFDKMDSKGIETVRRDNCRLVQTVIETVLKKIL--------- 855
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D ++ ++K DL V ++ L ITK L+K+ +Y+ ++A HV++A R+
Sbjct: 856 IDRDVKGAENYVKDTIADLLQNKVDMSKLVITKALSKS--DYSAKQA--HVELAERMRKR 911
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+ GD ++Y+I + T +++ + I L+NN + ID YYL Q+ + R
Sbjct: 912 DVGSAPTLGDRVAYVIVKGATGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLAKPLAR 969
Query: 1010 LLEPIEG 1016
+ +PI G
Sbjct: 970 IFDPILG 976
>gi|324120682|dbj|BAJ78732.1| DNA polymerase delta catalytic subunit [Metriocampa sp. 44]
Length = 1115
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 234/483 (48%), Gaps = 61/483 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + +L E+ V+P Q + ++
Sbjct: 545 NYMEMARVTGV---PLSFLLTRGQQVKVMSQILRKAREQKLVVPTYQSRASDEQ------ 595
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV----RM 670
+ G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+ +
Sbjct: 596 -----------FEGATVIEPNKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLAPGSEKT 644
Query: 671 LQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDI 726
L D T + + G+LP ++ L+ +R++ K +K +L D
Sbjct: 645 LGAEDFVRTPSGNLFVKSTLRKGLLPEILENLLAARKKAKEELKNEKDPFRCKVL---DG 701
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------N 777
RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE +
Sbjct: 702 RQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFGRTMIELTKKEVEARYSTSQGAEQD 761
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKK 836
+VIYGDTDS+M+ V K+G + + K ++L+ + VY LL+ KK+
Sbjct: 762 AKVIYGDTDSVMVRFGVQTVAEAMKLGKEAAEFVSTKFIPPIKLEFEKVYFPYLLINKKR 821
Query: 837 YAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ + KM C KG++ VRRD L ++ + +IL +D
Sbjct: 822 YAGLYFTRPEIHDKMDC----KGIETVRRDNCPLVAKLISTCLQKIL---------VDRD 868
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
Q +H +++ +DL V ++ L ITK+LTK +EYT ++A HV++A ++ ++
Sbjct: 869 PQGAKQHAQQVISDLLCNRVDISQLVITKELTKTDKEYTAKQA--HVELAHKMRKRDAGT 926
Query: 956 L-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
K GD + YII A Q+A + I L+NN + ID YYL Q+ + R+ EP
Sbjct: 927 APKLGDRVPYIIAMAVKGTPAYQKAEDPIYVLENN--IPIDSLYYLENQLAKPLLRIFEP 984
Query: 1014 IEG 1016
I G
Sbjct: 985 ILG 987
>gi|7682378|gb|AAF67244.1| DNA polymerase [Leishmania enriettii]
Length = 309
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 123/195 (63%), Gaps = 24/195 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL+G RSER E+LLLH FH+ ++ PD+ ++ K G + E + G
Sbjct: 125 RLTTIAGNLWSRTLLGARSERIEYLLLHTFHDLKFITPDRHV-QDFKRGRDDEEED---G 180
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 181 KRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRGNQSEIDVPP-- 238
Query: 681 EYLPEHQVDTG--------------ILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
PE+ + +LP IK LV+SRR+VK LMK + L + +I
Sbjct: 239 ---PENLICASCAAASLSAPCLHKCVLPKVIKSLVDSRREVKRLMKAEKDVNSLAL-LEI 294
Query: 727 RQKALKLTANSMYGC 741
RQKALKLTANSMYGC
Sbjct: 295 RQKALKLTANSMYGC 309
>gi|324120758|dbj|BAJ78770.1| DNA polymerase delta catalytic subunit [Eretes sticticus]
Length = 998
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 238/492 (48%), Gaps = 66/492 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V L+ L G + LL +Y +P
Sbjct: 428 NDIEMARVTGV---PLTSLLTKGEQVKVVAQLLRHARAHNYFMP---------------- 468
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
A +G+ + +Y G V+EP +G+Y I +DF+SLYPSI+ +N+C+TT+ ++ +D
Sbjct: 469 AVQGQANSEQSYEGATVIEPVRGYYTDPIATLDFSSLYPSIMIAHNLCYTTLINKVTKDK 528
Query: 675 DITT---LCEYLPEH-----QVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQ 723
T + E H V G+LP ++ L+ +R++ KA +K P + S L
Sbjct: 529 LGLTNDQITETPAGHLFVKSTVREGLLPQILQSLLSARKRTKAELKNATDPVIRSVL--- 585
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-----NLNY 778
D +Q ALK++ANS+YG G + ++ VTA GR ++ TK LVE N Y
Sbjct: 586 -DGKQLALKISANSVYGFTGATVGKLPCLEISGSVTAYGRTMIEQTKQLVEQHYCLNNGY 644
Query: 779 E----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
E VIYGDTDS+M++ V + ++G + + K ++L+ + VY LL+
Sbjct: 645 ESDSKVIYGDTDSVMVNFKVQSLERSMELGREAAELISTNFIKPIKLEFEKVYYPYLLIN 704
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K KM C KG++ VRRD L + ++L +
Sbjct: 705 KKRYAGLYYTKTDKYDKMDC----KGIETVRRDNCLLVVNVINTCLQKLL-----INRDP 755
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D +Q K++ +L V ++ L ITK+LTKA +Y ++A HV++ ++ +
Sbjct: 756 DGAVQ----FAKQVIANLLRNQVDISQLVITKELTKA--DYAGKQA--HVELMHKIQKRD 807
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
K GD I Y+ + A Q+A + I L+NN + ID NYYL Q+ + R+
Sbjct: 808 PGNAPKVGDRIPYVFVAANKNVPAYQKAEDPIYVLENN--IPIDTNYYLENQLSKPLVRI 865
Query: 1011 LEPIEGTDAVRI 1022
EPI G A I
Sbjct: 866 FEPILGDKAESI 877
>gi|344299649|gb|EGW30002.1| DNA polymerase delta catalytic subunit [Spathaspora passalidarum NRRL
Y-27907]
Length = 1079
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 214/413 (51%), Gaps = 44/413 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------IPVRMLQDSDITTL 679
Y G V+EP +G+YD I +DF+SLYPSI+ +N+C+TT I L + D T
Sbjct: 557 YEGATVIEPIRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLSKSAIQAYGLTEEDYTRT 616
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
++ + GILP+ + +L+ +R++ KA +K+ D+L + RQ ALK++A
Sbjct: 617 PNGDFFVKSHKRQGILPTILNELLTARKKAKADLKKETDPFKKDVL---NGRQLALKISA 673
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 674 NSVYGFTGATIGKLPCLAISSSVTAFGREMIEKTKNEVQEYYSKKNGHPFDAQVIYGDTD 733
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + + +K ++L+ + VY LL+ KK+YA L ++
Sbjct: 734 SVMVKFGYQDLETCMKLGEEAANYVSTKFKSPIKLEFEKVYYPYLLINKKRYAGLYWTRP 793
Query: 846 SN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
KM + KG++ VRRD +L V+ IL+E+ ++ +K
Sbjct: 794 DKFDKM----DTKGIETVRRDNCRLVQNVITKVLQFILEERD---------VEKAQRFVK 840
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL V L+ L ITK K +Y+ ++A HV++A R+ + GD ++
Sbjct: 841 QTIADLLQNRVDLSQLVITKAYAK--HDYSAKQA--HVELAERMKKRDPGSAPTLGDRVA 896
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I G+ + + + L+N+ L IDV YYL QQ+ + R+ PI G
Sbjct: 897 YVIVNTGSDKNYEKSEDPLYVLENS--LPIDVKYYLDQQLTKPLERIFNPILG 947
>gi|296816038|ref|XP_002848356.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS 113480]
gi|238841381|gb|EEQ31043.1| DNA polymerase delta catalytic subunit [Arthroderma otae CBS 113480]
Length = 1113
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 237/488 (48%), Gaps = 69/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+PD + +N +
Sbjct: 535 NYTEMARVTGVPFNFLL-----ARGQQIKFISQLFRKALEQKLVIPDLKNDENSNQ---- 585
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------- 665
Y G V+EP + +Y I +DF SLYPSIIQ +N+C+TT
Sbjct: 586 ------------QYEGATVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLNKRTV 633
Query: 666 --IPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+ ++ +D +T + +V G+L +++L+ +R++ K A+ K P + L
Sbjct: 634 EKLGLKKGEDYIVTPNDDMFCTAKVRKGLLSQILEELLSARKRAKRELAVEKDPFKKAVL 693
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G N + P+A+ T+ GR+++ TK VE
Sbjct: 694 ----NGRQLALKISANSVYGITGATNGKLPCLPIASSTTSYGRQMIEKTKDEVEARYTIS 749
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYML 830
+ +VIYGDTDS+M+ D K+G + +K K ++L+ + VY L
Sbjct: 750 NGYTHDAKVIYGDTDSVMVKFGTKDLAEAMKLGEEAAGYVSSKFMKPIKLEFEKVYYPYL 809
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L +N + KG++ VRRD L + V+++IL
Sbjct: 810 LINKKRYAGLY---WTNPDKYDKMDTKGIETVRRDNCLLVQTVIETVLNKIL-------- 858
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + ++K +DL V ++ L ITK LTK ++Y+ ++A HV++ R+
Sbjct: 859 -IDRNVSGAETYVKNTISDLLQNKVDMSKLVITKALTK--DKYSGKQA--HVELVERMRK 913
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I + +++ + I L+NN + ID YYL Q+ +T
Sbjct: 914 RDAGSAPTLGDRVAYVIVGGAAGDKNYEKSEDPIYVLENN--IPIDTRYYLENQLAKPLT 971
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 972 RIFEPILG 979
>gi|324120706|dbj|BAJ78744.1| DNA polymerase delta catalytic subunit [Aposthonia japonica]
Length = 1088
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 234/492 (47%), Gaps = 69/492 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL +K Y++P G +++
Sbjct: 520 NYMEMARVTGVS---LSCLLTRGQQIKVVSQLLRKARDKGYLMPTYSGGVQEEQ------ 570
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G V+EP KG+Y I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 571 -----------YEGATVIEPLKGYYADPITTLDFSSLYPSIMMAHNLCYTT----LLQGG 615
Query: 675 DITTLC----------EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLM 722
L + + V G+LP ++ L+ +R++ K +K ++L
Sbjct: 616 TKDKLSPEDYVKTPSQNFFVKESVRKGLLPEILESLLSARKKAKNDLKNETDPFKKNVL- 674
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN------- 775
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK +VE
Sbjct: 675 --DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQVVEQKYNTENG 732
Query: 776 --LNYEVIYGDTDSLMISCNVNDYDSVFKIG-NQIKSECNKLYKQLELDIDGVYKYMLLL 832
N VIYGDTDS+M+ V ++G + + +K K ++L+ + VY LL+
Sbjct: 733 YKHNAVVIYGDTDSVMVKFGVETLAEAMELGRDAAEYVTSKFVKPIKLEFEKVYFPYLLI 792
Query: 833 KKKKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KK+YA L ++ + KM C KG++ VRRD + L + + ++L
Sbjct: 793 NKKRYAGLYFTRPEQHDKMDC----KGIETVRRDNAPLVANMMNTCLQKLL--------- 839
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D E+ K+I +DL + ++ L ITK+LTK +Y ++A HV++A ++
Sbjct: 840 IDRDPNGAVEYAKQIISDLLCNRIDISQLVITKELTKT--DYAAKQA--HVELANKMKQR 895
Query: 952 NSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
++ K GD + Y+I + A +A + + NS + ID NYYL Q+ + R+
Sbjct: 896 DAGTAPKLGDRVPYVIISAAKNTPAYMKAEDPIYVLENS-IPIDSNYYLENQLSKPLLRI 954
Query: 1011 LEPIEGTDAVRI 1022
PI G A I
Sbjct: 955 FSPILGEKAESI 966
>gi|91773640|ref|YP_566332.1| replicative DNA polymerase I [Methanococcoides burtonii DSM 6242]
gi|91712655|gb|ABE52582.1| DNA polymerase B, delta subunit with exonuclease activity
[Methanococcoides burtonii DSM 6242]
Length = 910
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 246/496 (49%), Gaps = 69/496 (13%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I ++ V G +L T+ GG++ E +LL F ++ V+ + K EET +
Sbjct: 383 IALSRVSGILLQDTVSGGQTNMVEHILLTEFGKQGRVM-------STKPDEETSSFRR-- 433
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQDSDIT 677
++ GG VLEP+KG + K +I++D+ SLYP+I+ +N+C+TT+ P + +D I
Sbjct: 434 -KQNEDLKGGAVLEPEKGLH-KNVIVLDYKSLYPTIMMAHNLCYTTVVPPGKYPEDKVIR 491
Query: 678 TLC--EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+ E++ + +V GI+PS ++ L++ R + K LMKQ + + + D Q ALK+
Sbjct: 492 SPSKGEFV-KPEVFKGIVPSVLESLLDKRIETKKLMKQASDEGEYQV-LDATQLALKILL 549
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------------------- 775
NS YG G+ +R ++ +A VT+ GR + T+ +V N
Sbjct: 550 NSFYGYSGYARARLYSLQMANSVTSIGRGNIARTQDIVCNRIGTVILRDNKAYLRDEVDE 609
Query: 776 -------LNYEVIYGDTDSLMISCNVNDYDSVFK-----------IGNQIKSECN-KLYK 816
+ V YGDTDS+ + C ND D F+ +G ++ S L
Sbjct: 610 LKDDDKAVKLSVAYGDTDSVFVHCK-NDQDLEFEEGVFSLEDSALVGKKVASIVTASLPD 668
Query: 817 QLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKF 876
+EL+ + K +LL+ KK+YA I + +NG S ++KG++ VRRDW +L S+
Sbjct: 669 PMELEFEATAKRVLLIAKKRYAQW-IFEPANGGWTDSIKVKGLETVRRDWCELTSKMLNR 727
Query: 877 VISQILDEQSYTDYSLDDRLQNIHEHMKKIRT-DLDNGFVPLTLLEITKQLTKAPEEYTD 935
V+ +L E ++ ++++ + ++R D+ L +TK +K+P Y +
Sbjct: 728 VLELVLKEG-----DIEGSVEHVRTLVDRVRNLDVAKDSDLFEDLVLTKNFSKSPSSYKN 782
Query: 936 RKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDV 995
++ PH+ V + + G+ I ++I RA + + ++ N+ L +DV
Sbjct: 783 KQ--PHLTVVENIQRRTGVRPAIGERIPFVII--AGRGLFVDRAEDPDYVRENNVL-LDV 837
Query: 996 NYYLSQQIHPVVTRLL 1011
+YY+ +Q+ P V R+L
Sbjct: 838 DYYIQKQMLPPVERIL 853
>gi|330834000|ref|YP_004408728.1| DNA polymerase II [Metallosphaera cuprina Ar-4]
gi|329566139|gb|AEB94244.1| DNA polymerase II [Metallosphaera cuprina Ar-4]
Length = 776
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 231/466 (49%), Gaps = 77/466 (16%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++T + G L + M R E+LL+ + + ++P N+ E
Sbjct: 355 QLTVISGLPLDQLCMASVGYRIEWLLMRESKKFNELIP------NRVE------------ 396
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
RK +Y GGLV+EPK G ++ + ++DF+S+YPSI+ +YNI T+ D I
Sbjct: 397 RKNESYKGGLVIEPKPGLHEN-VAVLDFSSMYPSIMIKYNIGPDTLVQGECNDCWIAPEV 455
Query: 681 EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYG 740
Y V+ G S + L+E RR+VK+ + N + + D RQKALK+ AN+MYG
Sbjct: 456 GYKFRRDVN-GFYRSILVSLLEERRKVKSELANVNDEYER-RRLDERQKALKVMANAMYG 513
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSV 800
+G+ ++R++++ A VTA GRE+++ ++ + +EV+YGDTDS+ + N++D D++
Sbjct: 514 YMGWSSARWYSKEGAESVTAWGRELIIRASNIAKEAGFEVVYGDTDSIFVKGNMSDVDNL 573
Query: 801 FKIGNQIKSECNKLYKQLELDIDGVYKYMLLL---KKKKYAALSISKLSNGKMICSQEIK 857
+++ K+L+L+I KY + KK+YA L+ +GK+ +I
Sbjct: 574 ----------VSRITKELDLEIKIDKKYKKIFFTENKKRYAGLT----YDGKI----DIV 615
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI--------RTD 909
G + +R DW +A E + VI +IL L I E +K + R D
Sbjct: 616 GFEAIRGDWCDIAKETQRVVIEKIL-------------LSGISEAVKAVKGVIMKMKRKD 662
Query: 910 LD-NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICE 968
D +G + I K L K+ EEY PHV A + N K G I YI+ +
Sbjct: 663 FDIHGVI------IWKSLDKSFEEY--EVNAPHVIAAKKALNAGFAIDKLG-KIGYIVMK 713
Query: 969 DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
+ Y + + KN KIDV+YY+ +QI P V R+LEP
Sbjct: 714 GSGKISDRVEPYFLVKDKN----KIDVDYYIEKQIIPSVMRILEPF 755
>gi|951001|emb|CAA61282.1| DNA-directed DNA polymerase III [Candida albicans]
Length = 1038
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 214/412 (51%), Gaps = 42/412 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------IPVRMLQDSDITTL 679
Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT I L + D T
Sbjct: 516 YEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKT 575
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ + +L+ +R++ KA +K+ D+L + RQ ALK++A
Sbjct: 576 PNGDYFVHSNLRKGILPTILDELLTARKKAKADLKKETDPFKKDVL---NGRQLALKISA 632
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 633 NSVYGFTGATVGKLPCLAISSSVTAFGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTD 692
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + + +K ++L+ + VY LL+ KK+YA L ++
Sbjct: 693 SVMVKFGYQDLETCMKLGEEAANYVSTKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTR- 751
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+ + KG++ VRRD QL V+ IL+E+ + +K+
Sbjct: 752 --PEKFDKMDTKGIETVRRDNCQLVQNVITKVLEFILEERD---------VPKAQRFVKQ 800
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISY 964
DL + L+ L ITK +K +Y+ ++A HV++A R+ + GD ++Y
Sbjct: 801 TIADLLQNRIDLSQLVITKAYSK--HDYSAKQA--HVELAERMRKRDPGSAPTLGDRVAY 856
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+I + G + + + L+N+ L IDV YYL QQ+ + R+ PI G
Sbjct: 857 VIIKTGGDKNYEKSEDPLYVLENS--LPIDVKYYLDQQLTKPLERIFIPILG 906
>gi|119482197|ref|XP_001261127.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
gi|119409281|gb|EAW19230.1| DNA polymerase delta large chain [Neosartorya fischeri NRRL 181]
Length = 1105
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 242/487 (49%), Gaps = 69/487 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +FL L E+ V+P N K +E
Sbjct: 529 NYTEMARVTGVPFNFLL-----SRGQQVKFLSQLFRKALEQQLVIP------NMKSTDEQ 577
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP +G+Y I +DF SLYPSIIQ +N+C+TT+
Sbjct: 578 D------------YEGATVIEPSRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNKNSV 625
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+++ +D D +T + +V G+L +++L+ +R++ K K+ + +D +
Sbjct: 626 EKLKLKKDEDYIVTPNGDMFCTTKVRKGLLSQILEELLAARKRAK---KELAVETDPFKK 682
Query: 724 YDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
+ RQ ALK++ANS+YG G + P+A+ T+ GR+++ TK VE
Sbjct: 683 AVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKQEVEARYTIAN 742
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLL 831
+ + +VIYGDTDS+M+ V + + K+G + +K K ++L+ + VY LL
Sbjct: 743 GYSHDAKVIYGDTDSVMVKFGVTELEEAMKLGQEAADYVSSKFLKPIKLEFEKVYFPYLL 802
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
+ KK+YA L +N + KG++ VRRD L + V+ +IL E+
Sbjct: 803 INKKRYAGLY---WTNPNKFDKMDTKGIETVRRDNCLLVQNVIETVLHKILIERD----- 854
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+ +++K+ +DL + ++ L ITK L+KA +YT ++A HV++A R+
Sbjct: 855 ----IDGAQDYVKETISDLLQNKIDMSKLVITKALSKA--DYTAKQA--HVELAERMRKR 906
Query: 952 NSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ GD ++Y+I + G S+ + I L+NN + ID YYL Q+ + R
Sbjct: 907 DAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLANPLGR 964
Query: 1010 LLEPIEG 1016
+ EPI G
Sbjct: 965 IFEPILG 971
>gi|324120736|dbj|BAJ78759.1| DNA polymerase delta catalytic subunit [Cryptotympana facialis]
Length = 1102
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 237/491 (48%), Gaps = 65/491 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL EK+YV+P
Sbjct: 531 NYMEMSRVTGVS---LLSLLTRGQQIKVVSQLLRKAKEKNYVMP---------------- 571
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
G G ++ Y G V+EP KG+Y I +DF+SLYPSI+ +N+C+TT+
Sbjct: 572 -TYGVGSQEDQYEGATVIEPIKGYYKVPIATLDFSSLYPSIMIAHNLCYTTLLQGNARER 630
Query: 668 VRMLQDSDITTLCEY-LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ + D T Y + + G+LP ++ L+ +R++ K +K +D +
Sbjct: 631 LALTPDQFSRTPANYFFVKSSLRKGLLPEILEDLLNARKRAKLDLKN---ETDPFKKKVL 687
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE 779
D RQ ALK++ANS+YG G + +++ VT+ GR ++ TK VE Y+
Sbjct: 688 DGRQLALKISANSVYGFTGAQVGKLPCLEISSSVTSYGRTMIEQTKQEVEQHYCIANGYQ 747
Query: 780 ----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
V+YGDTDS+M+ V + ++G + K K ++L+ + VY LL+ K
Sbjct: 748 HDAVVVYGDTDSVMVKFGVTTLEEAMELGREAAEVVTTKFIKPIKLEFEKVYFPYLLISK 807
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ KM C KG++ VRRD S L + + ++L EQ+ D
Sbjct: 808 KRYAGLYFTRPDKYDKMDC----KGLETVRRDNSPLVANMMNTCLQKLLIEQNPDDAV-- 861
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
E+ K++ +DL + ++ L ITK+L K+ +Y ++A HV++A ++ +
Sbjct: 862 -------EYAKEVISDLLCNRIDISQLVITKELAKS--DYAAKQA--HVELANKMKKRDP 910
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K GD + Y+I A Q+A + I L+NN + ID NYYL Q+ + R+
Sbjct: 911 GTAPKLGDRVPYVIIAASKGTPAYQKAEDPIYVLENN--IPIDANYYLENQLSKPLVRIF 968
Query: 1012 EPIEGTDAVRI 1022
PI G A I
Sbjct: 969 SPILGDKAESI 979
>gi|358401350|gb|EHK50656.1| hypothetical protein TRIATDRAFT_53190 [Trichoderma atroviride IMI
206040]
Length = 1103
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 215/422 (50%), Gaps = 46/422 (10%)
Query: 624 AAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD- 675
A Y G V+EP +G+YD I +DF SLYPSIIQ +N+C+TT+ ++ +D D
Sbjct: 574 AQYEGATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLLRPGDAERFKLEKDVDY 633
Query: 676 -ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALK 732
IT + G+L +++L+ +R+Q K + Q +D + + RQ ALK
Sbjct: 634 IITPNGDQFVTAAKRKGLLAQILEELLSARKQAKRELAQ---ETDPFKKAVLNGRQLALK 690
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---NL------NYEVIYG 783
++ANS+YG G + +A+ T+ GR+++ TK VE N+ + +VIYG
Sbjct: 691 VSANSVYGLTGATTGKLPCLAIASSTTSFGRQMIEKTKREVEERYNIANGYAHDAQVIYG 750
Query: 784 DTDSLMISCNVNDYDSVFKIGNQI-KSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
DTDS+M+ D K+G + K +K K ++L+ + VY LL+ KK+YA L
Sbjct: 751 DTDSVMVKFGTKDLAEAMKLGEEASKFVSDKFLKPIKLEFEKVYFPYLLINKKRYAGLYW 810
Query: 843 SKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
++ KM + KG++ VRRD LA + V+ IL +D +Q +
Sbjct: 811 TRTEKYDKM----DTKGLETVRRDNCLLAQTVIEKVLRMIL---------IDRDVQGAQD 857
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GD 960
++K DL + ++ L ITK LTK E+Y ++A HV++A R+ ++ GD
Sbjct: 858 YVKNTIADLLQNKIDMSKLVITKALTK--EDYAAKQA--HVELAQRMKKRDAGSAPGLGD 913
Query: 961 TISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
++Y++ +++ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 914 RVAYVMVRGAAGAKNFEKSEDPIYVLENN--VPIDTKYYLDNQLAKPLGRIFEPILGETK 971
Query: 1020 VR 1021
R
Sbjct: 972 AR 973
>gi|358335780|dbj|GAA54399.1| DNA polymerase delta subunit 1 [Clonorchis sinensis]
Length = 1128
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 146/503 (29%), Positives = 232/503 (46%), Gaps = 87/503 (17%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V L+ + G+ + LL E +VLP Q ++G+E
Sbjct: 540 NNIEMARVTGV---PLTYLITRGQQVKVISQLLRKAREHDFVLPTYQ----SQQGDE--- 589
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G VLEP KGFY++ I +DF SLYPSI+ YN+C+TT ++Q S
Sbjct: 590 -----------YVGATVLEPIKGFYNEPIATLDFASLYPSIMMAYNLCYTT----LMQVS 634
Query: 675 DI------------------------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKAL 710
+ T Y + V G+LP +++L+ +R++ KA
Sbjct: 635 NTPGGAAAGLNAFVERYNLSPDDYICTPTGAYFVKSSVHRGLLPEILEQLLSARKKAKAD 694
Query: 711 MKQPNLSSDLLMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
+ + +D L + D RQ ALK++ANS+YG G + ++A VT+ GR ++
Sbjct: 695 LAK---ETDPLRKRVLDGRQLALKISANSVYGFTGAQVGKLPCLEISASVTSFGRRMIDQ 751
Query: 769 TKSLVEN---------LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-L 818
TK VE N VIYGDTDS+M V+ ++G + + + +
Sbjct: 752 TKEHVEGKFTRANGYAHNAAVIYGDTDSVMCKFGVSTVAEAMELGRKAAEIISAEFPNPI 811
Query: 819 ELDIDGVYKYMLLLKKKKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFV 877
L+ + VY LL+ KK+YA L +K + KM C KG++ VRRD S L + +
Sbjct: 812 RLEFEKVYFPYLLINKKRYAGLYFTKPDKHDKMDC----KGIETVRRDNSPLVANLIQAC 867
Query: 878 ISQIL---DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYT 934
+ +IL D S ++ + + +DL + ++ L I+K+LTK EEY
Sbjct: 868 LERILIHRDPNSAITFA------------QGVISDLLCNRIDISQLVISKELTKTDEEYA 915
Query: 935 DRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
++A HV++A ++ ++ GD + Y+I G +AT + I
Sbjct: 916 GKQA--HVELAAKMRKRDAGSAPHLGDRVPYVITAVGGKNSATYTKAEDPLYVLEHNVPI 973
Query: 994 DVNYYLSQQIHPVVTRLLEPIEG 1016
D YYL Q+ + R+ EPI G
Sbjct: 974 DTKYYLENQLANPLLRIFEPILG 996
>gi|145251457|ref|XP_001397242.1| DNA polymerase delta catalytic subunit [Aspergillus niger CBS 513.88]
gi|134082776|emb|CAK48550.1| unnamed protein product [Aspergillus niger]
gi|350636552|gb|EHA24912.1| hypothetical protein ASPNIDRAFT_210383 [Aspergillus niger ATCC 1015]
Length = 1105
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 218/414 (52%), Gaps = 44/414 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+Y I +DF SLYPSIIQ +N+C+TT+ +++++D D +
Sbjct: 579 YEGATVIEPVRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNKSSVERLKLVKDEDYIV 638
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + +V G+L +++L+ +R++ K K+ + +D + + RQ ALK++
Sbjct: 639 TPNGDMFCTAKVRKGLLSQILEELLSARKRAK---KELAVETDPFKKAVLNGRQLALKIS 695
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + P+A+ T+ GR+++ TK VE + + +VIYGDT
Sbjct: 696 ANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDT 755
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ V++ + K+G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 756 DSVMVKFGVDNLEEAMKLGQEASEYVSSKFLKPIKLEFEKVYFPYLLINKKRYAGLY--- 812
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG++ VRRD L + V+ +IL E+ + +++K
Sbjct: 813 WTNPNKYDKMDTKGIETVRRDNCLLVQNVIETVLQKILVERD---------IDGAQDYVK 863
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+DL + ++ L ITK L+K + YT ++A HV++A R+ ++ GD ++
Sbjct: 864 DTISDLLQNKIDMSKLVITKALSK--DAYTAKQA--HVELAERMRKRDAGSAPTLGDRVA 919
Query: 964 YIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I + +R+ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 920 YVIIKGAGGSKNYERSEDPIYVLENN--IPIDTKYYLDNQLANPLGRIFEPILG 971
>gi|62736742|gb|AAX97697.1| DNA polymerase [Sulfophobococcus zilligii]
Length = 797
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 224/445 (50%), Gaps = 75/445 (16%)
Query: 581 RNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYD 640
R E++L++ ++++ ++P N++E R+ Y G +V +P G ++
Sbjct: 387 RLEWVLMYEAYKRNELIP------NREE------------REVETYKGAVVFKPVPGIHE 428
Query: 641 KFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCE-----YLPE-----HQVDT 690
I ++DF S+YPSI+ +YN+ D+ + LCE PE
Sbjct: 429 D-IAVLDFTSMYPSIMIKYNVG---------PDTLVGELCEGEGYNIAPEVGHCFRAEPP 478
Query: 691 GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFF 750
G + KL++ R+ ++ MK+ +S D RQ+A+K+ AN+ YG +G+ +R++
Sbjct: 479 GFFKDVLVKLLQLRKSIREEMKKYPPTSYEYRLLDERQRAVKILANATYGYMGWTGARWY 538
Query: 751 AQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSE 810
+ A VTA GR+++ L NL +VIYGDTDSL ++ N +IK
Sbjct: 539 CKACAEAVTAWGRQLIRKAVDLASNLGLKVIYGDTDSLFVTYN----------PEKIKIF 588
Query: 811 CNKLYKQL--ELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWS 867
+ ++L E+ +D VYK + + KK+YA L L +G++ +I G + VR DW+
Sbjct: 589 IELVERELGFEIKVDKVYKRVFFTEAKKRYAGL----LEDGRI----DIVGFEAVRGDWA 640
Query: 868 QLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLT 927
++A E + ++ +L E S + E+++ + ++L G +PL L I K LT
Sbjct: 641 EVAKEVQENIVEILLKEGS---------VDKAVEYVRTVISNLMQGKIPLEKLIIWKTLT 691
Query: 928 KAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKN 987
K EEY PHV+ A RL N K++ GD I Y++ + GT + + RAY +K+
Sbjct: 692 KPLEEY--EATAPHVKAARRLINQGF-KVEVGDKIGYVVLK-GTG-SISDRAYPYILVKD 746
Query: 988 NSKLKIDVNYYLSQQIHPVVTRLLE 1012
ID NYY+ QI P R+LE
Sbjct: 747 PK--TIDYNYYIDHQIIPATLRILE 769
>gi|70943300|ref|XP_741713.1| DNA polymerase delta catalytic subunit [Plasmodium chabaudi chabaudi]
gi|56520266|emb|CAH84358.1| DNA polymerase delta catalytic subunit, putative [Plasmodium chabaudi
chabaudi]
Length = 694
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 228/436 (52%), Gaps = 47/436 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSDITTLC 680
+ G VLEP KG+Y + I +DF SLYPSI+ +N+C++T+ + L +DITT+
Sbjct: 177 FEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKNNDEISDLNKNDITTVP 236
Query: 681 E----YLPEHQVDTGILPSEIKKLVESRRQVKALMK-QPNLSSDLLMQYDIRQKALKLTA 735
+ V G+LP +++L+++R+ VKA+MK + N + +++ + RQ ALK++A
Sbjct: 237 GKNNFKFVKGNVKRGVLPLIVEELIKARKNVKAMMKNEQNPITKMVL--NGRQLALKISA 294
Query: 736 NSMYGCLG-FPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGDT 785
NS+YG G + +A +T GR ++ TK VE N V+YGDT
Sbjct: 295 NSVYGYTGAAAGGQLPCLEIATSITTFGRSMIEKTKETVEAYYCKKNGFEHNATVVYGDT 354
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNK-LYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ ND ++G +K ++L+ + VY LLL KK+YA L +
Sbjct: 355 DSVMVKFGTNDVGEAMRLGKDAADRISKEFLNPIKLEFEKVYCPYLLLNKKRYAGLLYTN 414
Query: 845 LS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ + KM C KG++ VRRD+ L + + V++++L E+ L + E+
Sbjct: 415 PNKHDKMDC----KGIETVRRDFCILIQQMMETVLNKLLIEKD---------LNSAIEYT 461
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K DL + ++LL +TK L K EY R LPHV++A +L +S GD +
Sbjct: 462 KSKIKDLLTNNIDMSLLVVTKSLGKT--EYETR--LPHVELAKKLKQRDSATAPNVGDRV 517
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI-EGTDAV 1020
SYII + +A +RA + + L NN L ID N+YL +P ++R+ E I + +D++
Sbjct: 518 SYIIIKGTKGQAQYERAEDPLYVLDNN--LSIDHNHYLDAIKNP-LSRIFEVIMQNSDSL 574
Query: 1021 RIAECLGLDTSLYRSQ 1036
E T L SQ
Sbjct: 575 FCGEHTRHKTILTSSQ 590
>gi|358389733|gb|EHK27325.1| hypothetical protein TRIVIDRAFT_33534 [Trichoderma virens Gv29-8]
Length = 1105
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 212/424 (50%), Gaps = 54/424 (12%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL-----C 680
Y G V+EP +G+YD I +DF SLYPSIIQ +N+C+TT +L+ D+
Sbjct: 578 YEGATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTT----LLRPGDVERFKLEKDV 633
Query: 681 EYLPEHQVDT--------GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKA 730
+Y+ D+ G+L +++L+ +R+Q K + Q +D + + RQ A
Sbjct: 634 DYIVTPNGDSFVTATKRKGLLAQILEELLSARKQAKRELAQ---ETDPFKKAVLNGRQLA 690
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVI 781
LK++ANS+YG G + +A+ T+ GR+++ TK VE + +VI
Sbjct: 691 LKISANSVYGLTGATTGKLPCLAIASSTTSFGRQMIEKTKREVEMKYNIANGYTHDAQVI 750
Query: 782 YGDTDSLMISCNVNDYDSVFKIGNQI-KSECNKLYKQLELDIDGVYKYMLLLKKKKYAAL 840
YGDTDS+M+ D K+G + K K K ++L+ + VY LL+ KK+YA L
Sbjct: 751 YGDTDSVMVKFGTKDLAEAMKLGEEASKFVSAKFLKPIKLEFEKVYFPYLLINKKRYAGL 810
Query: 841 SISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNI 899
+K KM + KG++ VRRD LA + V+ IL +D +Q
Sbjct: 811 YWTKTEKYDKM----DTKGLETVRRDNCLLAQTVIEKVLRMIL---------IDRDVQGA 857
Query: 900 HEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ- 958
+++K DL + ++ L ITK LTK E+Y ++A HV++A R+ ++
Sbjct: 858 QDYVKSTIADLLQNKIDMSKLVITKALTK--EDYAAKQA--HVELAQRMKKRDAGSAPGL 913
Query: 959 GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGT 1017
GD ++Y++ +++ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 914 GDRVAYVMVRGAAGAKNFEKSEDPIYVLENN--VPIDTKYYLDNQLAKPLGRIFEPILGE 971
Query: 1018 DAVR 1021
R
Sbjct: 972 TKAR 975
>gi|391325933|ref|XP_003737481.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Metaseiulus
occidentalis]
Length = 1088
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 232/488 (47%), Gaps = 71/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L+ G+ + LL E+ +LP N + G++
Sbjct: 515 NYMEMARVTGV---PLSYLLLRGQQIKVVSQLLRKAREQDLILP----VINVQTGDD--- 564
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
++G V+EP +G+Y I +DF+SLYPSI+ +N+C+TT +L D
Sbjct: 565 -----------FTGATVIEPTRGYYSVPIATLDFSSLYPSIMMAHNLCYTT----LLNDQ 609
Query: 675 DI-----------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLL 721
+ T +Y + G+LP ++ L+ +R++ K +K +L
Sbjct: 610 KMREQLKPDQYIKTPSGDYFVKASCRKGLLPDILESLLSARKKAKTDLKNEKDPFRKKVL 669
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
D RQ ALK++ANS+YG G + ++ TA GR+++ T VE
Sbjct: 670 ---DGRQLALKISANSVYGFTGAQVGKLPCLAISQSTTAFGRQMIDETAREVEAKYCQKN 726
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLL 831
+ +VIYGDTDS+MI V+ D +G + +K K ++L+ + VY LL
Sbjct: 727 GFQYDAKVIYGDTDSVMIKFGVDKLDEAMDLGREAAEYVTSKFVKPIKLEFEKVYYPYLL 786
Query: 832 LKKKKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
+ KK+YA L ++ + KM C KG++ VRRD L + + +IL E+
Sbjct: 787 INKKRYAGLLYTRPDKHDKMDC----KGIETVRRDNCPLVANLINTCLEKILIEKD---- 838
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+ K+ DL + ++ L ITK+LTK EEY ++A HV++A R+
Sbjct: 839 -----PKGAVNFAKQTIADLLCNRIDISQLVITKELTKTEEEYAGKQA--HVELANRMMK 891
Query: 951 TNSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ K GD + Y+I AA ++ + I L+NN + ID YYL QI +
Sbjct: 892 RDAGSAPKLGDRVPYVIIAASKGTAAYLKSEDPIYVLENN--IPIDTQYYLENQISKPLL 949
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 950 RIFEPILG 957
>gi|124802365|ref|XP_001347450.1| DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|232011|sp|P30315.1|DPOD1_PLAFK RecName: Full=DNA polymerase delta catalytic subunit
gi|23495030|gb|AAN35363.1|AE014831_39 DNA polymerase delta catalytic subunit [Plasmodium falciparum 3D7]
gi|9941|emb|CAA44289.1| DNA Polymerase delta [Plasmodium falciparum]
gi|160270|gb|AAA29589.1| DNA polymerase-delta [Plasmodium falciparum]
Length = 1094
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 227/416 (54%), Gaps = 52/416 (12%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSDITTL- 679
Y G VLEP KG+Y + I +DF SLYPSI+ +N+C++T+ V LQ+ DITT+
Sbjct: 577 YEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKSNHEVSDLQNDDITTIQ 636
Query: 680 ----CEYLPEHQVDTGILPSEIKKLVESRRQVKALMK--QPNLSSDLLMQYDIRQKALKL 733
+++ ++ V GILP +++L+E+R++VK L+K + N++ M + RQ ALK+
Sbjct: 637 GKNNLKFVKKN-VKKGILPLIVEELIEARKKVKLLIKNEKNNITK---MVLNGRQLALKI 692
Query: 734 TANSMYGCLGFPN-SRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYG 783
+ANS+YG G + + +A +T GR ++ TK VE+ N VIYG
Sbjct: 693 SANSVYGYTGASSGGQLPCLEVAVSITTLGRSMIEKTKERVESFYCKSNGYEHNSTVIYG 752
Query: 784 DTDSLMISCNVNDYDSVFKIGNQIKSECNK-LYKQLELDIDGVYKYMLLLKKKKYAALSI 842
DTDS+M+ N+ + +G +K ++L+ + VY LLL KK+YA L
Sbjct: 753 DTDSVMVKFGTNNIEEAMTLGKDAAERISKEFLSPIKLEFEKVYCPYLLLNKKRYAGLLY 812
Query: 843 SKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+ + + KM C KG++ VRRD+ L + + V++++L E++ L + E
Sbjct: 813 TNPNKHDKMDC----KGIETVRRDFCILIQQMMETVLNKLLIEKN---------LNSAIE 859
Query: 902 HMK-KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-G 959
+ K KI+ L N + ++LL +TK L K +Y R LPHV++A +L +S G
Sbjct: 860 YTKSKIKELLTNN-IDMSLLVVTKSLGKT--DYETR--LPHVELAKKLKQRDSATAPNVG 914
Query: 960 DTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
D +SYII + +A +RA + + L NN L ID N+YL P ++R+ E I
Sbjct: 915 DRVSYIIVKGVKGQAQYERAEDPLYVLDNN--LAIDYNHYLDAIKSP-LSRIFEVI 967
>gi|303314745|ref|XP_003067381.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107049|gb|EER25236.1| DNA polymerase delta catalytic subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1110
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 241/487 (49%), Gaps = 68/487 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+P+ + + GEE
Sbjct: 533 NYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKALEQDLVIPNLK----NENGEEQ 583
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP K +YD I +DF SLYPSIIQ +N+C+TT+
Sbjct: 584 -------------YKGATVIEPVKDYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKTSV 630
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+++ +D D +T + +V G+L +++L+ +R++ K K+ + +D +
Sbjct: 631 EKLKLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQELLSARKRAK---KELAVETDPFKK 687
Query: 724 YDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN------ 775
+ RQ ALK++ANS+YG G N + +A+ T+ GR++++ TK VE
Sbjct: 688 AVLNGRQLALKISANSVYGITGASNGKLPCLAIASSTTSYGRQMIMKTKDEVEARFTMAN 747
Query: 776 ---LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLL 831
+ +VIYGDTDS+M+ V D K+G + + K + ++L+ + VY LL
Sbjct: 748 GYPYDAKVIYGDTDSVMVKFGVKDIAEAMKLGQEAADFVSAKFLEPIKLEFEKVYFPYLL 807
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
+ KK+YA L +N + KG++ VRRD +L + V+ +IL
Sbjct: 808 INKKRYAGLF---WTNPNKFDKMDSKGIETVRRDNCRLVQTVIETVLKKIL--------- 855
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D + ++K DL V ++ L ITK L+K+ +Y+ ++A HV++A R+
Sbjct: 856 IDRDVNGAENYVKDTIADLLQNKVDMSKLVITKALSKS--DYSAKQA--HVELAERMRKR 911
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+ GD ++Y+I + T +++ + I L+NN + ID YYL Q+ + R
Sbjct: 912 DVGSAPTLGDRVAYVIVKGATGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLAKPLAR 969
Query: 1010 LLEPIEG 1016
+ +PI G
Sbjct: 970 IFDPILG 976
>gi|1706513|sp|P52025.1|DPOL_METVO RecName: Full=DNA polymerase
gi|495654|gb|AAA72443.1| DNA polymerase [Methanococcus voltae]
Length = 824
Score = 163 bits (412), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 232/485 (47%), Gaps = 86/485 (17%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I + + L T S+ EFLLL E++ + P++ + +E
Sbjct: 376 IMFSRIVNQPLYDTSRMNSSQMVEFLLLKRSFEQNMISPNRPSSSSYRE----------- 424
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R K +Y GG V EP KG + I+ +DF SLYPSI+ +NI S T +
Sbjct: 425 -RAKFSYEGGYVREPLKGIQED-IVSLDFMSLYPSILISHNI------------SPETVI 470
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMK---QPNLSSDLLMQYDIRQKALKLTAN 736
E ++ GI+P + +L+ R+ +K L+K Q N + + + QK++K+ AN
Sbjct: 471 YEEKERENMELGIIPKTLNELLSRRKHIKMLLKDKIQKNEFDEEYSRLEHEQKSIKVLAN 530
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
S YG L FP +R+++ A +VT GR+ + T E ++VIY DTD D
Sbjct: 531 SHYGYLAFPMARWYSDKCAEMVTGLGRKYIQETIEKAEEFGFKVIYADTDGFYAKW---D 587
Query: 797 YDSVFKIGNQIKSECNKLY--------------------------KQLELDIDGVYKYML 830
YD + K + + +KL + +EL+ +G +K L
Sbjct: 588 YDKLQKGKKEENDKSDKLSNLPKLSKEELIILTKKFLKGINEELPEGMELEFEGHFKRGL 647
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
+ KKKYA + +G ++ +KG++VVRRDWS +A + + VI +L++ D
Sbjct: 648 FVTKKKYALIE----DDGHIV----VKGLEVVRRDWSNIAKDTQQAVIRALLED---GDV 696
Query: 891 SLDDR-LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+L + ++N +++KK D ++ L I QLTK EEY + PH++VA ++
Sbjct: 697 NLAKKIIKNTIDNLKKGNIDKND-------LLIHTQLTKNIEEY--KSTAPHIEVAKKIK 747
Query: 950 NTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ GD ISYII + S + ++RA +E + D+NYY+ Q+ P V R
Sbjct: 748 QRGD-SVRVGDVISYIIVK--GSRSISERAELLEYAGD-----YDINYYIDNQVLPPVIR 799
Query: 1010 LLEPI 1014
++E +
Sbjct: 800 IMESL 804
>gi|71002632|ref|XP_755997.1| DNA polymerase delta catalytic subunit Cdc2 [Aspergillus fumigatus
Af293]
gi|66853635|gb|EAL93959.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
fumigatus Af293]
gi|159130051|gb|EDP55165.1| DNA polymerase delta large chain [Aspergillus fumigatus A1163]
Length = 1105
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 219/414 (52%), Gaps = 44/414 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+Y I +DF SLYPSIIQ +N+C+TT+ +++ +D D +
Sbjct: 579 YEGATVIEPIRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNKNIVEKLKLKKDEDYIV 638
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + +V G+L +++L+ +R++ K K+ + +D + + RQ ALK++
Sbjct: 639 TPNGDMFCTTKVRKGLLSQILEELLAARKRAK---KELAVETDPFKKAVLNGRQLALKVS 695
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + P+A+ T+ GR+++ TK VE + + +VIYGDT
Sbjct: 696 ANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDT 755
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ V + + K+G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 756 DSVMVKFGVTELEEAMKLGQEAADYVSSKFPKPIKLEFEKVYFPYLLINKKRYAGLY--- 812
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N K + KG++ VRRD L + V+ +IL E+ + +++K
Sbjct: 813 WTNPKKFDKMDTKGIETVRRDNCLLVQNVIETVLHKILIERD---------IDGAQDYVK 863
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ +DL + ++ L ITK L+KA +YT ++A HV++A R+ ++ GD ++
Sbjct: 864 ETISDLLQNKIDMSKLVITKALSKA--DYTAKQA--HVELAERMRKRDAGSAPTLGDRVA 919
Query: 964 YIICED-GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I + G S+ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 920 YVIVKGAGGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLANPLGRIFEPILG 971
>gi|324120714|dbj|BAJ78748.1| DNA polymerase delta catalytic subunit [Euconocephalus varius]
Length = 1035
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 143/491 (29%), Positives = 234/491 (47%), Gaps = 71/491 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL E++Y++P G + +
Sbjct: 465 NYMEMARVTGVS---LASLLTRGQQIKVVSQLLRKARERNYLMPAYSAGVQEDQ------ 515
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G V+EPKKG+Y I +DF+SLYPSI+ +N+C+TT+ ++++
Sbjct: 516 -----------YEGATVIEPKKGYYSDPIATLDFSSLYPSIMMAHNLCYTTLLQGGVKEN 564
Query: 675 --------DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
T + + V G+LP ++ L+ +R++ KA +K+ D Q
Sbjct: 565 LGLTPDQYTKTPASNFFVKGSVRKGLLPEILENLLSARKKAKADLKE---EKDPFKQKVL 621
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 622 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQRYSVANGYQ 681
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKK 834
+ VIYGDTDS+M+ V + +G + +K K ++L+ + VY LL+ K
Sbjct: 682 HDASVIYGDTDSVMVKFGVKTLEEAMSLGREAAEFVTSKFVKPIKLEFEKVYFPYLLINK 741
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDY 890
K+YA L ++ KM C KG++ VRRD L + + ++L D DY
Sbjct: 742 KRYAGLYFTRPDKYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLLIDRDPNGAVDY 797
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+ K++ +DL + ++ L +TK+LTK+ +Y ++A HV +A ++
Sbjct: 798 A------------KQVISDLLCNRIDVSQLVVTKELTKS--DYAAKQA--HVVLAEKMKK 841
Query: 951 TNSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ K GD + Y+ + A +A + I L+NN + ID NYY+ Q+ +
Sbjct: 842 RDPGTAPKLGDRVPYVFTTAAKNTPAYMKAEDPIYVLENN--IPIDSNYYMENQLSKPLL 899
Query: 1009 RLLEPIEGTDA 1019
R+ EPI G A
Sbjct: 900 RIFEPILGDKA 910
>gi|156616275|ref|NP_002682.2| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|379030588|ref|NP_001243778.1| DNA polymerase delta catalytic subunit [Homo sapiens]
gi|50403732|sp|P28340.2|DPOD1_HUMAN RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase subunit delta p125
gi|21885469|gb|AAM76971.1| polymerase (DNA directed), delta 1, catalytic subunit [Homo sapiens]
gi|119592262|gb|EAW71856.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa, isoform
CRA_a [Homo sapiens]
gi|119592263|gb|EAW71857.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa, isoform
CRA_a [Homo sapiens]
Length = 1107
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 236/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V +LSR G + + LL A HE ++P K EG
Sbjct: 528 VLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHE-GLLMP-----VVKSEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 TAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|340959854|gb|EGS21035.1| DNA polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1108
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 237/493 (48%), Gaps = 70/493 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +FL L E+ V+P+ + E+
Sbjct: 530 NYTEMARVTGVPFNFLL-----ARGQQVKFLSQLFRKALEQKLVIPNLR--------SES 576
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
E Y G V+EP +G+YD I +DF SLYPSII +N+C+TT+
Sbjct: 577 SEEQ---------YEGATVIEPVRGYYDVPIATLDFASLYPSIIMAHNLCYTTLIKKKDV 627
Query: 667 ---PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
++ +D +T + + G+L +++L+ +R+Q K K+ +D +
Sbjct: 628 EKWNLKKDEDYIVTPNGDMFVTTKQRKGLLAQILEELLAARKQAK---KELAAETDPFKK 684
Query: 724 YDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
+ RQ ALK++ANS+YG G N + +A+ TA GR++++ TK VE
Sbjct: 685 AVLNGRQLALKISANSVYGLTGATNGKLPCLEIASSTTAFGRQMIMKTKEEVEKRYCIAN 744
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSE--CNKLYKQLELDIDGVYKYML 830
+ + +VIYGDTDS+M+ D K+G Q SE +K K ++L+ + VY L
Sbjct: 745 GYSHDAQVIYGDTDSVMVKFGTRDLKEAMKLG-QDASEYVSSKFIKPIKLEFEKVYFPYL 803
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L ++ + + KG++ VRRD L V+ IL
Sbjct: 804 LINKKRYAGLYWTRPEKFDKV---DTKGIETVRRDNCLLVQTVIDKVLRMIL-------- 852
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + E++K DL + ++ L ITK LTK E+Y ++A HV++A R+
Sbjct: 853 -IDQDVPGAQEYVKSTIADLLQNKIDMSKLVITKALTK--EDYAAKQA--HVELAQRMKK 907
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ GD ++Y++ + T +R+ + I L++N + ID YYL Q+ +
Sbjct: 908 RDPGSAPSLGDRVAYVMVKGATGSKNFERSEDPIYVLEHN--VPIDTKYYLDNQLAKPLG 965
Query: 1009 RLLEPIEGTDAVR 1021
R+ EPI G R
Sbjct: 966 RIFEPILGEAKAR 978
>gi|181622|gb|AAA35768.1| DNA polymerase delta [Homo sapiens]
Length = 1107
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 236/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V +LSR G + + LL A HE ++P K EG
Sbjct: 528 VLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHE-GLLMP-----VVKSEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 TAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGGEAADWVSGHFPSPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|109125666|ref|XP_001116065.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Macaca
mulatta]
Length = 1327
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 237/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V +LSR G + + LL A HE ++P + EG
Sbjct: 528 VLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHE-GLLMP-----VVRSEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 AAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKL--SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S ++ +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDTHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|14250670|gb|AAH08800.1| Polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Homo
sapiens]
gi|123998555|gb|ABM86879.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
gi|157929094|gb|ABW03832.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa
[synthetic construct]
Length = 1107
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 236/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V +LSR G + + LL A HE ++P K EG
Sbjct: 528 VLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHE-GLLMP-----VVKSEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 TAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|254567878|ref|XP_002491049.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|238030846|emb|CAY68769.1| Catalytic subunit of DNA polymerase delta [Komagataella pastoris
GS115]
gi|328352425|emb|CCA38824.1| DNA polymerase delta subunit 1 [Komagataella pastoris CBS 7435]
Length = 1093
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 222/417 (53%), Gaps = 51/417 (12%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V++P +G+YD + +DF SLYPSI+ +N+C+TT+ + +++D D +
Sbjct: 566 YEGATVIDPVRGYYDVPVATLDFASLYPSIMMAHNLCYTTLLNKPTIDRLGLVKDKDYIL 625
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLT 734
T ++ + + GILP+ +++L+ +R++ K +K +D + + RQ ALK++
Sbjct: 626 TPNGDFFVKEDLRKGILPTILQELLAARKKAKYDLKT---ETDPFKKQVLNGRQLALKIS 682
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GRE++ TK V+ + + +VIYGDT
Sbjct: 683 ANSVYGFTGATIGKLPCLAISSSVTAFGREMIEATKQAVQERYTIKNGYDHDAQVIYGDT 742
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ ND K+G + + + ++K ++L+ + VY LL+ KK+YA L
Sbjct: 743 DSVMVKFGENDLRKCMKLGEEAAAFVSTIFKNPIKLEFEKVYFPYLLINKKRYAGLY--- 799
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR-LQNIHEHM 903
+N + KG++ VRRD +L VI+++L +Y L+ R ++ +
Sbjct: 800 WTNPDKYDKMDTKGIETVRRDNCRLVQN----VITKVL------EYMLELRDVEGAENFV 849
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K+ DL V L+ L ITK L++ ++Y ++A HV++A R+ ++ GD +
Sbjct: 850 KQTIADLLQDRVDLSQLVITKALSR--QDYAGKQA--HVELAERMRKRDAGSAPTLGDRV 905
Query: 963 SYIICEDGTS---EAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+Y+I + ++ E + Y +E L ID NYYL Q+ +TR+ EPI G
Sbjct: 906 AYVIIKTSSTKNYEKSEDPLYVLEH-----SLPIDTNYYLENQLAKPLTRIFEPILG 957
>gi|149235442|ref|XP_001523599.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
gi|146452578|gb|EDK46834.1| DNA polymerase delta catalytic subunit [Lodderomyces elongisporus
NRRL YB-4239]
Length = 1087
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 219/413 (53%), Gaps = 44/413 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT------TIPVRMLQDSDITTL 679
+ G V+EP++G+YD I +DF+SLYPSI+ +N+C+T TI L + D T
Sbjct: 565 FEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLISKNTIESYKLTEEDYTKT 624
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ + +L+ +R++ K +K D+L + RQ ALK++A
Sbjct: 625 PNGDYFVKPNKKQGILPTILNELLTARKKAKTDLKNETDPFKKDVL---NGRQLALKISA 681
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 682 NSVYGFTGATIGKLPCLAISSSVTAFGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTD 741
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + ++ +K ++L+ + VY LL+ KK+YA L
Sbjct: 742 SVMVKFGYQDLETCMKLGEEAANYVSQKFKNPIKLEFEKVYFPYLLINKKRYAGLY---W 798
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR-LQNIHEHMK 904
+N K + KG++ VRRD +L VI+++L ++ L++R ++ +K
Sbjct: 799 TNPKKFDKMDTKGIETVRRDNCRLVQN----VITKVL------EFILEERDVEKAQRFVK 848
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL V L+ L ITK +K +Y+ ++A HV++A R+ + GD ++
Sbjct: 849 QTIADLLQNRVDLSQLVITKAYSK--HDYSAKQA--HVELAERMRKRDPGSAPTLGDRVA 904
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I + G + + + L+N+ L IDV YYL QQ+ + R+ PI G
Sbjct: 905 YVIVKSGGEKNYEKSEDPLYVLENS--LPIDVKYYLDQQMTKPLERIFIPILG 955
>gi|452845568|gb|EME47501.1| hypothetical protein DOTSEDRAFT_50888 [Dothistroma septosporum NZE10]
Length = 1104
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 242/490 (49%), Gaps = 74/490 (15%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+ + L E+ V+PD K EG +
Sbjct: 527 NYTEMARVTGVPFNFL---LSKGQQIKFISQLFRKALEQQLVVPDL-----KSEGSD--- 575
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
Y G V+EP +G+YD + +DF SLYPSIIQ +N+C+TT+
Sbjct: 576 ---------EQYEGATVIEPTRGYYDVPVATLDFASLYPSIIQAHNLCYTTLLNKNAVEK 626
Query: 668 VRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
+++ +D D +T + +V G+L +++L+ +R++ K K+ + +D +
Sbjct: 627 MQLKKDDDYIVTPNGDLFATTKVRKGLLSQILEELLGARKRAK---KELAVETDPFKKAV 683
Query: 726 I--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--------- 774
+ RQ ALK++ANS+YG G + +A+ TA GR+++ TK VE
Sbjct: 684 LNGRQLALKISANSVYGLTGATVGKLPCLAIASSTTAYGRQMIEKTKEEVEGKYTVANGY 743
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLK 833
+ + +VIYGDTDS+M+ ND ++G + +K K ++L+ + VY LL+
Sbjct: 744 SHDAQVIYGDTDSVMVKFGPNDLAKAMELGQEAAGYVSSKFIKPIKLEFEKVYFPYLLIN 803
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K N KM + KG++ VRRD +L Q + E S +
Sbjct: 804 KKRYAGLYWTKPDNYDKM----DTKGIETVRRDNCRLV---------QNVIETSLKMLLI 850
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D +Q +++K+ ++L V ++ L ITK LTK+ +Y +++A H ++A R+ +
Sbjct: 851 DQDVQGAQDYVKETISELLQNRVDMSNLVITKALTKS--DYANKQA--HTELAERMRKRD 906
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPV 1006
+ GD ++Y++ + AA + Y E L++N L ID YYL Q+
Sbjct: 907 AGSAPALGDRVAYVMVKG----AAGSKGYEKSEDPMFVLEHN--LPIDTKYYLDNQLAKP 960
Query: 1007 VTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 961 LGRIFEPILG 970
>gi|181620|gb|AAA58439.1| DNA polymerase-delta catalytic-subunit [Homo sapiens]
Length = 1107
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 236/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V +LSR G + + LL A HE ++P K EG
Sbjct: 528 VLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHE-GLLMP-----VVKSEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 TAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|410258776|gb|JAA17355.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
gi|410333287|gb|JAA35590.1| polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Pan
troglodytes]
Length = 1107
Score = 162 bits (411), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 236/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V +LSR G + + LL A HE ++P K EG
Sbjct: 528 VLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHE-GLLMP-----VVKSEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 TAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|443690888|gb|ELT92898.1| hypothetical protein CAPTEDRAFT_165849 [Capitella teleta]
Length = 1052
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 235/490 (47%), Gaps = 73/490 (14%)
Query: 555 NQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N +E R+T V G +LSR G+ + LL + V+P + ETG
Sbjct: 478 NYIEMARVTGVSLGILLSR----GQQIKVMSQLLRKAKTQDLVIPVYKV--------ETG 525
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR---- 669
+ ++G V+EP +G+YD + +DF SLYPSI+ +N+C+TT+
Sbjct: 526 DE----------FTGATVIEPVRGYYDTPVATLDFASLYPSIMMAHNLCYTTLITTPSSI 575
Query: 670 ----MLQDSDITTLCEYL-PEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ- 723
+ D I T L + V G+LP ++ L+ +R++ K +K +D +
Sbjct: 576 EKEGLSSDQYIKTPANSLFVKSTVRKGLLPEILESLLSARKKAKTELKS---ETDPFRKK 632
Query: 724 -YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------ 776
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 633 VLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAFGRLMIEQTKQFVEETYTVKNG 692
Query: 777 ---NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLL 832
+ V+YGDTDS+M V+ ++G + E K + ++L+ + VY LL+
Sbjct: 693 YKHDAMVVYGDTDSVMCRFGVSTVAEAMELGQEAALEITKTFVSPIKLEFEKVYFPYLLI 752
Query: 833 KKKKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYT 888
KK+YA L +K + KM C KG++ VRRD QL + + +IL D
Sbjct: 753 NKKRYAGLYFTKADVHDKMDC----KGIETVRRDNCQLVANLINTCLQKILINRDPMGAV 808
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
DY+ K+ +DL + ++ L ITK+L K +EY ++A HV++A R+
Sbjct: 809 DYA------------KQTISDLLCNRIDISQLVITKELAKTEDEYAAKQA--HVELAHRM 854
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
++ Q GD + Y+I AA ++ + I L+NN + IDV YYL Q+
Sbjct: 855 RKRDAGSAPQLGDRVPYVIIAAPKKTAAYLKSEDPIYVLENN--IPIDVQYYLENQLAKP 912
Query: 1007 VTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 913 LLRIFEPILG 922
>gi|374325878|ref|YP_005084078.1| DNA polymerase II [Pyrobaculum sp. 1860]
gi|356641147|gb|AET31826.1| DNA polymerase II [Pyrobaculum sp. 1860]
Length = 785
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 232/477 (48%), Gaps = 72/477 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E++LL ++ V P N++E
Sbjct: 355 IQLSSVSGLPLDQVAAASVGNRVEWMLLRYAYKMGEVAP------NREE----------- 397
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQDSDIT 677
R+ Y G +VLEPK G Y+ ++L DF+S+YP+++ YN+ T P S +
Sbjct: 398 -REYEPYKGAIVLEPKPGLYNDVLVL-DFSSMYPNVMMRYNLSPDTYLEPGEPEPPSGVY 455
Query: 678 TLCEYLPEHQVDT-GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
E + + G +P +++LVE RR + MK+ + S D RQKALK+ AN
Sbjct: 456 IAPEVGHRFRREPPGFVPQVLRQLVELRRLAREEMKRYSPDSPEYRVLDERQKALKVMAN 515
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
+MYG +G+ +R++ + +A VTA R IL + + L V+YGDTDSL +
Sbjct: 516 AMYGYMGWVGARWYKREVAESVTAFARSILRDVIDYAKRLGVVVVYGDTDSLFV------ 569
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDI--DGVYKYMLLLK-KKKYAALSISKLSNGKMICS 853
K G ++ + ++ +DI D Y +L + KK+YA L L +G++
Sbjct: 570 -----KRGGDVEKLVKYVEEKYGIDIKVDKDYSTVLFTEAKKRYAGL----LRDGRI--- 617
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY--SLDDRLQNIHEHMKKIRTDLD 911
+I G +VVR DWS+LA E VI IL + + + ++ + + +K R DLD
Sbjct: 618 -DIVGFEVVRGDWSELAKEVQLRVIELILKSRDAAEARRRVTQYVREVVDALKNYRFDLD 676
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
+ L I K L K +EY + PH+ AL L K+ +G T+ Y++ + G
Sbjct: 677 D-------LVIWKTLDKELDEY--KAYTPHLHAALLLKR-RGYKVGKGTTVGYVVVKGG- 725
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
E ++RA + + + KIDV+YY+ +Q+ P A+RIAE +G+
Sbjct: 726 -EKISERA--VPYILVDDVKKIDVDYYIERQVIPA------------ALRIAEVIGV 767
>gi|397485032|ref|XP_003813667.1| PREDICTED: DNA polymerase delta catalytic subunit [Pan paniscus]
Length = 1107
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 236/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V +LSR G + + LL A HE ++P K EG
Sbjct: 528 VLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHE-GLLMP-----VVKSEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 TAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|303275346|ref|XP_003056969.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461321|gb|EEH58614.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1067
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 237/480 (49%), Gaps = 60/480 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPD--KQYGKNKKEGEETGEANK 617
I + V G LS L G+S + +L ++ ++P K+ +++EG
Sbjct: 492 IEMARVTGVPLSFLLSRGQSIKVLSQILRKARQRGLLVPHMPKKGASDQQEG-------- 543
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRML----- 671
AY G VL+ K G+Y+ I +DF SLYPSI+ +N+C+ T +P M+
Sbjct: 544 -----GVAYEGATVLDAKAGYYELPIATLDFASLYPSIMMAHNLCYCTLVPQNMVSRMNP 598
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMK--QPNLSSDLLMQYDIRQK 729
+D + + + GILP +++L+ +R++ KA +K Q L +L D RQ
Sbjct: 599 EDVSKSPTGDVFVKSNKTKGILPEILEELLSARKRAKADLKKAQDPLEKAVL---DGRQL 655
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEV 780
ALK++ANS+YG G ++A T+ GR ++ TK LV + N +V
Sbjct: 656 ALKVSANSVYGFTGATVGALPCLEISASTTSYGRNMIDQTKELVMEKYNTKNGYSANADV 715
Query: 781 IYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAA 839
IYGDTDS+MI NV D + K+G + + + + K ++L+ + VY LL+ KK+YA
Sbjct: 716 IYGDTDSVMIKFNVTDLEEAMKLGEEAATYVSSTFIKPIKLEFEKVYWPYLLISKKRYAG 775
Query: 840 LSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYSLDDRL 896
L +N K + KG++ VRRD L + + V+ +IL D DY
Sbjct: 776 L---LWTNPKKHDYMDTKGIETVRRDNCLLVRQVIETVLQKILISRDVPGAVDY------ 826
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+K+ +DL + L+LL ITK LT+ + Y ++ A HV++A R+ +
Sbjct: 827 ------VKRTISDLLMNRMDLSLLVITKGLTQDADAYENKAA--HVELAKRMKERDPATA 878
Query: 957 K-QGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD I+Y+I + + +++ + I +++N L ID +YL + + R+ EPI
Sbjct: 879 PVVGDRIAYVIVKAAKNAKGYEKSEDPIWAMEHN--LPIDCQHYLDHYLGKPLMRIFEPI 936
>gi|324120766|dbj|BAJ78774.1| DNA polymerase delta catalytic subunit [Panorpa takenouchii]
Length = 1093
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 235/485 (48%), Gaps = 65/485 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL E Y++P
Sbjct: 519 NYMEMARVTGV---PLSCLLTRGQQIKVVSQLLRKSKEAGYLMP---------------- 559
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM---- 670
+ G+G + Y G V+EPK+G+Y I +DF SLYPSI+ +NIC+TT+
Sbjct: 560 VHTGQGSDEQ-YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNICYTTLLAPSNRDK 618
Query: 671 --LQDSDITTLCE--YLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQ 723
L D IT + + V G+LP ++ L+ +R++ K + K P S L
Sbjct: 619 LGLTDDQITKTPSNNFFVKGSVRRGLLPEILESLLTARKRAKNELKVEKDPFKRSVL--- 675
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NY 778
D RQ ALK++ANS+YG G + ++ VTA GR ++ +TK VE Y
Sbjct: 676 -DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRSMIEHTKQEVEQRYTKQNGY 734
Query: 779 E----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
E VIYGDTDS+M++ V + ++G + + K K ++L+ + VY LL+
Sbjct: 735 ESDAVVIYGDTDSVMVNFGVKSLERSMELGREAAEYVSAKFVKPIKLEFEKVYFPYLLIN 794
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L +N + + KG++ VRRD L + + ++L +D
Sbjct: 795 KKRYAGLY---FTNAEKYDKIDCKGIETVRRDNCPLVANMMNTCLQKLL---------ID 842
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
E+ K+I +DL + ++ L ITK+L+K +YT ++A HV++A ++ +
Sbjct: 843 RDPNGAVEYAKQIISDLLCNRIDISQLVITKELSKT--DYTAKQA--HVELANKMKKRDP 898
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K GD + Y++ + A ++A + I L+NN + ID YYL Q+ + R+
Sbjct: 899 GTAPKLGDRVPYVLTASTKNAKAYEKAEDPIYVLENN--IPIDSKYYLDNQLSKPLLRIF 956
Query: 1012 EPIEG 1016
EPI G
Sbjct: 957 EPILG 961
>gi|270002921|gb|EEZ99368.1| DNA polymerase delta [Tribolium castaneum]
Length = 1050
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 181/647 (27%), Positives = 304/647 (46%), Gaps = 83/647 (12%)
Query: 407 FVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE---PVSIAQVYSEFDQIATQYKI-- 461
FV+E + + N D YL+ R+ HLK K I + S + TQ KI
Sbjct: 328 FVRETDPDIFTGYNINNFDFP-YLIERANHLKLKRFDYLGRILDIRSSIKETVTQTKIGK 386
Query: 462 LDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENL 521
FKS E + A+++ V + ++R S ++ ++ G+ V + + L+N
Sbjct: 387 RTFKSINFEGRVAYDMLMV--IKRDFKLR-SYTLNSVSQEILGEQKEDVHYSVITDLQNG 443
Query: 522 LLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSER 581
+ + + + +A+ P RI N +E R+T V ++ L G +
Sbjct: 444 DEQTRRRLAVYC-LKDAD-LPVRI-LSTVRSFTNDVEMARVTGV---PITSLLTKGEQVK 497
Query: 582 NEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDK 641
LL Y +P Q + ++ Y G V+EP++G+Y
Sbjct: 498 VVAQLLKHARAAGYFMPTHQGAPSSEQ-----------------YEGATVIEPRRGYYTD 540
Query: 642 FIILMDFNSLYPSIIQEYNICFTTI------PVRMLQDSDITTL---CEYLPEHQVDTGI 692
I +DF+SLYPSI+ +N+C+TT+ L D +TT C ++ + V G+
Sbjct: 541 PIATLDFSSLYPSIMIAHNLCYTTLIKPSIKEKLCLSDEQVTTTPANCMFV-KSSVRPGL 599
Query: 693 LPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLTANSMYGCLGFPNSRFF 750
LP ++ L+ +R++ KA +K+ ++D +++ D RQ A K++ANS+YG G +
Sbjct: 600 LPHILQHLLAARKKTKAELKE---ATDPVVRAVLDGRQLAYKISANSVYGFTGAQVGKLP 656
Query: 751 AQPLAALVTAKGREILLNTKSLVENL-----NYE----VIYGDTDSLMISCNVNDYDSVF 801
+++ VTA GR ++ TK VE YE VIYGDTDS+M++ V +
Sbjct: 657 CLEISSSVTAYGRTMIEQTKQEVEQHYRIENGYESDAMVIYGDTDSVMVNFRVKSLERSM 716
Query: 802 KIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGV 859
++G + + K K ++L+ + VY LL+ KK+YA L +K KM C KG+
Sbjct: 717 ELGREAADLISAKFIKPIKLEFEKVYWPYLLINKKRYAGLYFTKPDKYDKMDC----KGI 772
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
+ VRRD L + + ++L +D + KK+ +DL V ++
Sbjct: 773 ETVRRDNCTLVVDVINSCLRKLL---------IDKDPDGAVNYAKKVISDLLQNNVDISQ 823
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNN---TNSKKLKQGDTISYIICEDGTSEAAT 976
L ITK+LTK +Y ++A HV+++ ++ N+ KL GD I Y+I + A
Sbjct: 824 LVITKELTK--NDYAAKQA--HVELSKKMTKRDPGNAPKL--GDRIPYVIIAGTKNSKAF 877
Query: 977 QRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
++A + I L+NN + ID YYL Q+ + R+ +PI G A I
Sbjct: 878 EKAEDPIYVLENN--IPIDSQYYLQNQLSKPLIRIFQPILGDSAESI 922
>gi|358375619|dbj|GAA92199.1| DNA polymerase delta large chain [Aspergillus kawachii IFO 4308]
Length = 1105
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 217/414 (52%), Gaps = 44/414 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+Y I +DF SLYPSIIQ +N+C+TT+ +++++D D +
Sbjct: 579 YEGATVIEPVRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNKNSVERLKLVKDEDYIV 638
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + +V G+L +++L+ +R++ K K+ +D + + RQ ALK++
Sbjct: 639 TPNGDMFCTAKVRKGLLSQILEELLSARKRAK---KELATETDPFKKAVLNGRQLALKIS 695
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + P+A+ T+ GR+++ TK VE + + +VIYGDT
Sbjct: 696 ANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDT 755
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ V++ + K+G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 756 DSVMVKFGVDNLEEAMKLGQEASEYVSSKFLKPIKLEFEKVYFPYLLINKKRYAGLY--- 812
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG++ VRRD L + V+ +IL E+ + +++K
Sbjct: 813 WTNPNKYDKMDTKGIETVRRDNCLLVQNVIETVLQKILVERD---------IDGAQDYVK 863
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+DL + ++ L ITK L+K + YT ++A HV++A R+ ++ GD ++
Sbjct: 864 DTISDLLQNKIDMSKLVITKALSK--DAYTAKQA--HVELAERMRKRDAGSAPTLGDRVA 919
Query: 964 YIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I + +R+ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 920 YVIIKGAGGSKNYERSEDPIYVLENN--IPIDTKYYLDNQLANPLGRIFEPILG 971
>gi|336472726|gb|EGO60886.1| hypothetical protein NEUTE1DRAFT_120002 [Neurospora tetrasperma FGSC
2508]
gi|350294031|gb|EGZ75116.1| DNA polymerase delta catalytic subunit [Neurospora tetrasperma FGSC
2509]
Length = 1104
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 214/417 (51%), Gaps = 50/417 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQDSDITTLCEYLP 684
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT I R ++ D+ +Y+
Sbjct: 577 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLIKKRDIERWDLKKDEDYIV 636
Query: 685 EHQVDT--------GILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
D G+L +++L+ +R+Q K A+ K P + L + RQ ALK+
Sbjct: 637 TPNGDMFVTTKQRKGLLAQILEELLSARKQAKRELAVEKDPFKKAVL----NGRQLALKV 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G N + +A+ VT+ GR+++ TK VE + + +VIYGD
Sbjct: 693 SANSVYGLTGATNGKLPCLEIASSVTSFGRQMIERTKKEVEERYTIANGYSHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSE--CNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
TDS+M+ D K+G Q SE K K ++L+ + VY LL+ KK+YA L
Sbjct: 753 TDSVMVKFGTKDLAEAMKLG-QDASEYVSGKFVKPIKLEFEKVYFPYLLINKKRYAGLYW 811
Query: 843 SKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+K KM + KG++ VRRD L + V+ IL +D +
Sbjct: 812 TKPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVPGAQA 858
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GD 960
++K DL + ++ L ITK LTK E Y ++A HV++A R+ ++ GD
Sbjct: 859 YVKDTIADLLQNKIDMSKLVITKALTK--ENYDAKQA--HVELAQRMKKRDAGSAPGLGD 914
Query: 961 TISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + T +R+ + I L++N + ID YYL Q+ + R+ EPI G
Sbjct: 915 RVAYVMVKGATGSKNFERSEDPIYVLEHN--VPIDTKYYLDNQLAKPLGRIFEPILG 969
>gi|395858290|ref|XP_003801504.1| PREDICTED: DNA polymerase delta catalytic subunit [Otolemur
garnettii]
Length = 1108
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 234/488 (47%), Gaps = 63/488 (12%)
Query: 552 VQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE 611
V N +E R+T V LS L G+ + LL + V+P K EG E
Sbjct: 529 VLVNAVEMARVTGV---PLSYLLSRGQQVKVVSQLLRQAMREGLVMP-----VVKSEGGE 580
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----- 666
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 581 D-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGA 627
Query: 667 --PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L +
Sbjct: 628 AQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLRR 684
Query: 724 --YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 685 QVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVEN 744
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLL 831
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY LL
Sbjct: 745 GYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLL 804
Query: 832 LKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 805 ISKKRYAGLLFSSRAEAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------- 853
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D + H +++ +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 854 --IDRDPEGAVAHAQEVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERMR 909
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 910 KRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPLL 968
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 969 RIFEPILG 976
>gi|320581797|gb|EFW96016.1| Catalytic subunit of DNA polymerase delta [Ogataea parapolymorpha
DL-1]
Length = 1102
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 217/416 (52%), Gaps = 49/416 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DF SLYPSI+ +N+C+TT+ + + QD D +
Sbjct: 583 YEGATVIEPVRGYYDVPIATLDFASLYPSIMMAHNLCYTTLLNKQTVERLGLKQDEDYIV 642
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T + + GILP+ +++L+ +R++ K +K+ +L + RQ ALK++
Sbjct: 643 TPNGDMFVHPHLRKGILPTILQELLAARKKAKQDLKKETDPFKKQVL---NGRQLALKIS 699
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++ TK+ V+ + +VIYGDT
Sbjct: 700 ANSVYGFTGATIGKLPCLAISSSVTAFGRVMIEQTKAEVQRHYSIENGYEYDAQVIYGDT 759
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ +D ++ ++G + + + +K ++L+ + VY LL+ KK+YA L
Sbjct: 760 DSVMVKFGHSDMETCMRLGEEAAAYVSTKFKHPIKLEFEKVYFPYLLINKKRYAGLF--- 816
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + + KG++ VRRD +L V+ IL+E++ ++ + +K
Sbjct: 817 WTNPRKFDKMDTKGIETVRRDNCRLVQNVITRVLELILEERN---------VEAAEQFVK 867
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
K DL V L+ L I+K L++ ++Y ++ PHV++A R+ ++ GD ++
Sbjct: 868 KTIADLLQNRVDLSQLVISKALSR--QDYAAKQ--PHVELAERMRKRDAGSAPTLGDRVA 923
Query: 964 YIICE---DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I + D E + Y +E + L ID YYL Q+ +TR+ EPI G
Sbjct: 924 YVIIKTAGDKNYEKSEDPLYVLE-----NSLPIDTKYYLENQLANPLTRIFEPILG 974
>gi|85103616|ref|XP_961558.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
gi|18376276|emb|CAD21389.1| probable DNA-directed DNA polymerase III [Neurospora crassa]
gi|28923105|gb|EAA32322.1| DNA polymerase delta catalytic subunit [Neurospora crassa OR74A]
Length = 1104
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 214/417 (51%), Gaps = 50/417 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQDSDITTLCEYLP 684
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT I R ++ D+ +Y+
Sbjct: 577 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLIKKRDIERWDLKKDEDYIV 636
Query: 685 EHQVDT--------GILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
D G+L +++L+ +R+Q K A+ K P + L + RQ ALK+
Sbjct: 637 TPNGDMFVTTKQRKGLLAQILEELLSARKQAKRELAVEKDPFKKAVL----NGRQLALKV 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G N + +A+ VT+ GR+++ TK VE + + +VIYGD
Sbjct: 693 SANSVYGLTGATNGKLPCLEIASSVTSFGRQMIERTKKEVEERYTIANGYSHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSE--CNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
TDS+M+ D K+G Q SE K K ++L+ + VY LL+ KK+YA L
Sbjct: 753 TDSVMVKFGTKDLAEAMKLG-QDASEYVSGKFIKPIKLEFEKVYFPYLLINKKRYAGLYW 811
Query: 843 SKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+K KM + KG++ VRRD L + V+ IL +D +
Sbjct: 812 TKPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVPGAQA 858
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GD 960
++K DL + ++ L ITK LTK E Y ++A HV++A R+ ++ GD
Sbjct: 859 YVKDTIADLLQNKIDMSKLVITKALTK--ENYDAKQA--HVELAQRMKKRDAGSAPGLGD 914
Query: 961 TISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + T +R+ + I L++N + ID YYL Q+ + R+ EPI G
Sbjct: 915 RVAYVMVKGATGSKNFERSEDPIYVLEHN--VPIDTKYYLDNQLAKPLGRIFEPILG 969
>gi|324120744|dbj|BAJ78763.1| DNA polymerase delta catalytic subunit [Metylophorus sp. E-43]
Length = 1036
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 237/491 (48%), Gaps = 71/491 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL EK +++P
Sbjct: 463 NYMEMARVTGV---ALPSLLTRGQQIKVLSQLLRKTREKGFLMP---------------- 503
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
A G G Y G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT+ +++
Sbjct: 504 AYHGTGGDDQ-YEGATVIEPRKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLQGGVKEK 562
Query: 675 -DITT-------LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-YD 725
D++T Y V G+LP ++ L+++R++ KA +K N + +L + D
Sbjct: 563 LDLSTDQYTKTPAQNYFVHKSVRKGLLPEILENLLDARKKAKADLK--NETDELRKKVLD 620
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-LNYE----- 779
RQ ALK++ANS+YG G + ++ VTA GR ++ T+ VE N E
Sbjct: 621 GRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRSMIEQTRLEVEQKFNIENGYKH 680
Query: 780 ---VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKK 835
VIYGDTDS+M+ D +G + + K ++L+ + VY LL+ KK
Sbjct: 681 DSVVIYGDTDSVMVRFGNKDLAECMDLGREAADHVSAKFLSPIKLEFEKVYYPYLLINKK 740
Query: 836 KYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYS 891
+YA L ++ K+ C KG++ VRRD + L + + +IL D Y+
Sbjct: 741 RYAGLYWTRPDKYDKLDC----KGLETVRRDNAPLVANMMNSCLQKILINRDPDGAVAYA 796
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL--- 948
KK+ DL V ++ L ITK+L K+ +Y ++A HV++A ++
Sbjct: 797 ------------KKVIADLLCNKVDISQLVITKELAKS--DYAAKQA--HVELAAKMKKR 840
Query: 949 NNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ N+ KL GD + Y+IC A Q+A + + NS + ID +YYL Q+ +
Sbjct: 841 DPGNAPKL--GDRVPYVICCATKGTPAYQKAEDPIYVLENS-IPIDFSYYLENQLAKPLL 897
Query: 1009 RLLEPIEGTDA 1019
R+ EPI G A
Sbjct: 898 RIFEPILGDKA 908
>gi|123496446|ref|XP_001326973.1| polymerase zeta subunit [Trichomonas vaginalis G3]
gi|121909895|gb|EAY14750.1| polymerase zeta subunit, putative [Trichomonas vaginalis G3]
Length = 1045
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 214/413 (51%), Gaps = 37/413 (8%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PVRMLQDSDITTLCEY 682
Y G V+EP G+Y I +DFNSLYPSI+ +NIC++T+ P +Q C +
Sbjct: 519 YQGATVIEPSTGYYTTPIPTLDFNSLYPSIMIGHNICYSTLMTKPDPNVQYEKSPNHC-F 577
Query: 683 LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLTANSMYG 740
+H G+LP +K+L+ +R+ K LM++ ++D + + +D RQ ALK++ANS+YG
Sbjct: 578 FAKHDEFPGVLPEILKELLAARKATKKLMEE---ATDPMQKKVFDKRQLALKISANSVYG 634
Query: 741 CLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGDTDSLMIS 791
G + ++ VTA GR ++ TK LVEN + VIYGDTDS+M++
Sbjct: 635 FTGATVGKLPCLQISESVTAYGRSMIEMTKELVENKYNKQNGYSDDAHVIYGDTDSVMVN 694
Query: 792 CNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKM 850
+ K G + + + + + +D + YK LL+ KK YA L +
Sbjct: 695 FGNITLEEAIKRGKEAANYVSDHFPPPIHIDFEKAYKPYLLISKKHYAGLLWTNHIKYDK 754
Query: 851 ICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
I + KG++ VRRD +L + V++ +L ++ + +KKI +DL
Sbjct: 755 I---DAKGIEAVRRDNCRLVQGLVQKVLTLLLVKEDPGSAKV---------FVKKIVSDL 802
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQGDTISYIICED 969
+ + L+ L I+K L+K ++Y ++A HV++A R+ + + GD I +++C+
Sbjct: 803 VSDHIDLSFLVISKGLSKKADQYKGKQA--HVELADRMMKRDPGSAPRMGDRIPFVMCDV 860
Query: 970 GTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
G +++ + I L+++ + ID YYL Q+ + RL PI G + V+
Sbjct: 861 GNGAKGYEKSEDPIWALEHS--IPIDTKYYLENQLSGPLNRLFGPIIGEEKVK 911
>gi|255514001|gb|EET90265.1| DNA polymerase Pol2 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 826
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 225/467 (48%), Gaps = 51/467 (10%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I +T GN LS + + EFLL+ H ++P NK + E +
Sbjct: 391 IELTRTTGNSLSDVSVSTTGQLVEFLLMKYAHRYGELIP------NKPDDREI------R 438
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR---MLQDSDI 676
R G V P+ G Y I DF LYPSII +NI +T+ + +
Sbjct: 439 SRLINPIEGAYVKTPEPGIYSNLAIF-DFRGLYPSIIISHNIDPSTVCTDCTDYYESPNG 497
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
T + P GI+P +K L++ R +VK L K+ + + R +ALK+T+N
Sbjct: 498 TKFSKSRP------GIMPMILKLLIDQRAEVKKLYKKDKGN----IYLGSRSQALKITSN 547
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
S YG LG+ SR++++ A+ VTA GR+ +L T S E ++VIYGDTDS+++
Sbjct: 548 SFYGYLGYARSRWYSRECASSVTAYGRQYILQTISDAEEQGFKVIYGDTDSIVMLLGGRT 607
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ-- 854
+ + +K KL K +EL+++ YK + + KK +I+ + S+
Sbjct: 608 KEDALEF---VKKLNEKLPKSMELELEDFYKRAVFVGKKSEKIGAITGAKKKYAMISESG 664
Query: 855 --EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
+I+G ++VRRDWS++A + + V+ IL+E S + E +K + DL +
Sbjct: 665 FIKIRGFELVRRDWSRIARDTQRKVLDTILNEGS---------AEKAVEIVKNVIKDLRD 715
Query: 913 GFVPLTLLEITKQLTKAPEEY-TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
G VP+ +L I+ QL K + Y L + A++ +++ ISY+I DG+
Sbjct: 716 GKVPIGMLAISTQLRKGIDSYDATSPELSAAKKAVKAGLKTKDEVEHA-VISYVITRDGS 774
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
S + +A +EE N D YY++ Q+ P V R+L+ + T+
Sbjct: 775 S--ISDKAV-LEEFAKN----YDPEYYINHQVVPSVMRILKELNLTE 814
>gi|406607376|emb|CCH41280.1| DNA polymerase delta catalytic subunit [Wickerhamomyces ciferrii]
Length = 1108
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 218/419 (52%), Gaps = 43/419 (10%)
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQ 672
G Y G V+EP +G+YD I +DF+SLYPSI+ +N+C+TT+ +++ +
Sbjct: 581 GSSDVQYEGATVIEPHRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKPTIERLKLEK 640
Query: 673 DSDITT--LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQ 728
D D T ++ + GILP +++L+ +R++ K MK D+L + RQ
Sbjct: 641 DKDYTVSPSGDFFVKTSQRKGILPIILEELLSARKKAKKDMKTETDPFKRDVL---NGRQ 697
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYE 779
ALK++ANS+YG G + +++ VTA GR ++ TK V+ + + E
Sbjct: 698 LALKISANSVYGFTGATIGKLPCLAISSSVTAFGRGMIEKTKQEVQDKYTIANGYDYDSE 757
Query: 780 VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYA 838
VIYGDTDS+M+ D ++ K+G + + K ++L+ + VY LL+ KK+YA
Sbjct: 758 VIYGDTDSVMVKFGYKDLETCMKLGEEAADFVSTKFLNPIKLEFEKVYFPYLLINKKRYA 817
Query: 839 ALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
L +N + + KG++ VRRD +L S ++ IL+++ +++
Sbjct: 818 GLY---WTNTEKFDKMDTKGIETVRRDNCRLVSNVITKILELILEKRD---------VKS 865
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
+K+ DL V + L ITK L+++ +Y +++ PHV++A R+ ++
Sbjct: 866 AENFVKQTIADLLQDRVDMQQLVITKALSRS--DYANKQ--PHVELADRMRKRDAGSAPT 921
Query: 959 -GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
GD ++Y+I + +++ + + L++N L ID YYL Q+ +TR+ EPI G
Sbjct: 922 IGDRVAYVIIKTAGNKSYEKSEDPLYVLEHN--LPIDSKYYLENQLANPLTRIFEPILG 978
>gi|170067371|ref|XP_001868453.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
gi|167863529|gb|EDS26912.1| DNA polymerase delta catalytic subunit [Culex quinquefasciatus]
Length = 1100
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 236/492 (47%), Gaps = 66/492 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL + Y++P Q + ++
Sbjct: 526 NYMEMARVTGVPLQCL---LTRGQQIKVMSQLLRKTRKCGYLIPSYQSSGSDEQ------ 576
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+
Sbjct: 577 -----------YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLLQPGFNKE 625
Query: 668 VRMLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
L D I T + V GILP ++ L+ +R++ KA +K + +D +
Sbjct: 626 KLGLTDDQITRTPANNTFVKASVRKGILPEILESLLGARKRAKADLK---VETDPFKRSV 682
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NY 778
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE Y
Sbjct: 683 LDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQRYTAENGY 742
Query: 779 E----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
E VIYGDTDS+M++ V + ++G + + K K ++L+ + VY LL+
Sbjct: 743 ENDAVVIYGDTDSVMVNFGVKSLERSMELGREAAEFVSAKFVKPIKLEFEKVYYPYLLIN 802
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM C KG++ VRRD S L + + ++L E++
Sbjct: 803 KKRYAGLYFTRPDKYDKMDC----KGIETVRRDNSPLVANMMNSCLQKLLIERN------ 852
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
+ EH K++ DL + ++ L ITK+L K +Y ++A HV++A ++ +
Sbjct: 853 ---PEGAVEHAKQVIADLLCNRIDISQLVITKELAKT--DYAAKQA--HVELAAKMKKRD 905
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ K GD + Y+I + A +A + I L+N + ID NYYL Q+ + R+
Sbjct: 906 AGSAPKLGDRVPYVIINAAKNTPAYMKAEDPIYVLENC--VPIDANYYLENQLSKPLLRI 963
Query: 1011 LEPIEGTDAVRI 1022
EPI G A I
Sbjct: 964 FEPILGEKAESI 975
>gi|239607450|gb|EEQ84437.1| DNA polymerase delta subunit [Ajellomyces dermatitidis ER-3]
Length = 1106
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 170/629 (27%), Positives = 294/629 (46%), Gaps = 100/629 (15%)
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK--YAFNLPGVP--DLS 484
YLL R+EHLK S +S IA++ F S++I + + N+ G DL
Sbjct: 403 YLLKRAEHLK----CSGFHFWSRLKHIASRVGDARFSSKQIGNRESKSTNISGRIQLDLL 458
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK---- 540
+ ++ Y + L S + G + + + ++ G P++ +
Sbjct: 459 QLIQRDYQLRSYTLNS-----VCAQFLGEQKEDVHHTMITELFNGT-----PDSRRRLAV 508
Query: 541 -------FPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFH 591
P R+ K N E R+T V N L R ++ +FL L
Sbjct: 509 YCLKDAYLPQRL-MDKLMCLVNYTEMARVTGVPFNFLL-----SRGQQVKFLSQLFRKAL 562
Query: 592 EKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
E+ V+P+ +N+ E+ Y G V+EP + +YD I +DF SL
Sbjct: 563 EQQLVIPNL---RNESTSEQ--------------YEGATVIEPIRDYYDVPIATLDFASL 605
Query: 652 YPSIIQEYNICFTTI---------PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVE 702
YPSIIQ +N+C+TT+ ++ +D +T + +V G+L +++L+
Sbjct: 606 YPSIIQAHNLCYTTLLKKSTIDTHQMKEGEDYIVTPNGDRFCTSKVRKGLLTQILEELLG 665
Query: 703 SRRQVKALMKQPNLSSDLLMQYDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTA 760
+R++ K K+ + +D + + RQ ALK++ANS+YG G R P+A+ T+
Sbjct: 666 ARKRAK---KELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGRLPCLPIASSTTS 722
Query: 761 KGREILLNTKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC 811
GR+++ TK VE + + +V+YGDTDS+M+ + D K+G +
Sbjct: 723 YGRQMIEKTKEEVEAKFTIANGYSHDAKVVYGDTDSVMVKFGMQDLAEAMKLGREAADFV 782
Query: 812 N-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQL 869
+ K K ++L+ + VY LL+ KK+YA L ++ KM + KG++ VRRD ++
Sbjct: 783 SAKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKYDKM----DTKGIETVRRDNCRM 838
Query: 870 ASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKA 929
+ V+ +IL +D + ++K +DL + ++ L ITK L+K
Sbjct: 839 VQTVIETVLRKIL---------IDRDVGAAQSYVKDTISDLLQNKIDMSKLVITKALSK- 888
Query: 930 PEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKN 987
++YT ++A HV++A R+ ++ GD ++Y+I + G S+ + I L+N
Sbjct: 889 -KDYTAKQA--HVELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLEN 945
Query: 988 NSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
N + ID YYL Q+ +TR+ EPI G
Sbjct: 946 N--IPIDTKYYLDNQLAKPLTRIFEPILG 972
>gi|261200399|ref|XP_002626600.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
gi|239593672|gb|EEQ76253.1| DNA polymerase delta subunit [Ajellomyces dermatitidis SLH14081]
Length = 1106
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 170/629 (27%), Positives = 294/629 (46%), Gaps = 100/629 (15%)
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK--YAFNLPGVP--DLS 484
YLL R+EHLK S +S IA++ F S++I + + N+ G DL
Sbjct: 403 YLLKRAEHLK----CSGFHFWSRLKHIASRVGDARFSSKQIGNRESKSTNISGRIQLDLL 458
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK---- 540
+ ++ Y + L S + G + + + ++ G P++ +
Sbjct: 459 QLIQRDYQLRSYTLNS-----VCAQFLGEQKEDVHHTMITELFNGT-----PDSRRRLAV 508
Query: 541 -------FPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFH 591
P R+ K N E R+T V N L R ++ +FL L
Sbjct: 509 YCLKDAYLPQRL-MDKLMCLVNYTEMARVTGVPFNFLL-----SRGQQVKFLSQLFRKAL 562
Query: 592 EKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
E+ V+P+ +N+ E+ Y G V+EP + +YD I +DF SL
Sbjct: 563 EQQLVIPNL---RNESTSEQ--------------YEGATVIEPIRDYYDVPIATLDFASL 605
Query: 652 YPSIIQEYNICFTTI---------PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVE 702
YPSIIQ +N+C+TT+ ++ +D +T + +V G+L +++L+
Sbjct: 606 YPSIIQAHNLCYTTLLKKSTIDTHQMKEGEDYIVTPNGDRFCTSKVRKGLLTQILEELLG 665
Query: 703 SRRQVKALMKQPNLSSDLLMQYDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTA 760
+R++ K K+ + +D + + RQ ALK++ANS+YG G R P+A+ T+
Sbjct: 666 ARKRAK---KELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGRLPCLPIASSTTS 722
Query: 761 KGREILLNTKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC 811
GR+++ TK VE + + +V+YGDTDS+M+ + D K+G +
Sbjct: 723 YGRQMIEKTKEEVEAKFTIANGYSHDAKVVYGDTDSVMVKFGMQDLAEAMKLGREAADFV 782
Query: 812 N-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQL 869
+ K K ++L+ + VY LL+ KK+YA L ++ KM + KG++ VRRD ++
Sbjct: 783 SAKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKYDKM----DTKGIETVRRDNCRM 838
Query: 870 ASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKA 929
+ V+ +IL +D + ++K +DL + ++ L ITK L+K
Sbjct: 839 VQTVIETVLRKIL---------IDRDVGAAQNYVKDTISDLLQNKIDMSKLVITKALSK- 888
Query: 930 PEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKN 987
++YT ++A HV++A R+ ++ GD ++Y+I + G S+ + I L+N
Sbjct: 889 -KDYTAKQA--HVELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLEN 945
Query: 988 NSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
N + ID YYL Q+ +TR+ EPI G
Sbjct: 946 N--IPIDTKYYLDNQLAKPLTRIFEPILG 972
>gi|367037701|ref|XP_003649231.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
gi|346996492|gb|AEO62895.1| hypothetical protein THITE_2107682 [Thielavia terrestris NRRL 8126]
Length = 1103
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 237/488 (48%), Gaps = 70/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +FL L E+ V+P+ + E+
Sbjct: 525 NYTEMARVTGVPFNFLL-----ARGQQVKFLSQLFRKALEQKLVIPNLR--------SES 571
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
E Y G V+EP +G+YD I +DF SLYPSIIQ +N+C+TT+
Sbjct: 572 SEEQ---------YEGATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLIKKKDI 622
Query: 667 ---PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
++ +D +T + + G+L +++L+ +R+Q K K+ +D +
Sbjct: 623 EKWGLKKDEDYIVTPNGDMFVTTKQRKGLLSQILEELLAARKQAK---KELAAETDPFKK 679
Query: 724 YDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
+ RQ ALK++ANS+YG G N + +A+ T+ GR+++ TK VE
Sbjct: 680 AVLNGRQLALKISANSVYGLTGATNGKLPCLEIASSTTSFGRQMIEKTKQEVEKRYCIAN 739
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIG-NQIKSECNKLYKQLELDIDGVYKYMLL 831
+ + +VIYGDTDS+M+ D K+G + + +K K ++L+ + VY LL
Sbjct: 740 GYSHDAQVIYGDTDSVMVKFGTKDLAEAMKLGEDASQFVSSKFIKPIKLEFEKVYFPYLL 799
Query: 832 LKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
+ KK+YA L +K KM + KG++ VRRD L + V+ IL
Sbjct: 800 INKKRYAGLYWTKPDKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL-------- 847
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + E++K DL + ++ L ITK LTK E+Y ++A HV++A R+
Sbjct: 848 -IDQDVPGAQEYVKDTIADLLQNKIDMSKLVITKALTK--EDYAAKQA--HVELAQRMKK 902
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y++ + +R+ + I L+NN + ID YYL Q+ +
Sbjct: 903 RDAGSAPALGDRVAYVMVKGAAGSKNFERSEDPIYVLENN--VPIDTKYYLDNQLAKPLG 960
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 961 RIFEPILG 968
>gi|13124716|sp|P46588.2|DPOD_CANAL RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|3850149|emb|CAA21949.1| DNA polymerase delta [Candida albicans]
Length = 1038
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 214/412 (51%), Gaps = 42/412 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------IPVRMLQDSDITTL 679
Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT I L + D T
Sbjct: 516 YEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKT 575
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ + +L+ +R++ KA +K+ D+L + RQ ALK++A
Sbjct: 576 PNGDYFVHSNLRKGILPTILDELLTARKKAKADLKKETDPFKKDVL---NGRQLALKISA 632
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 633 NSVYGFTGATVGKLPCLAISSSVTAFGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTD 692
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + + +K ++L+ + VY LL+ KK+YA L ++
Sbjct: 693 SVMVKFGYQDLETCMKLGEEAANYVSTKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTR- 751
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+ + KG++ VRRD +L V+ IL+E+ + +K+
Sbjct: 752 --PEKFDKMDTKGIETVRRDNCRLVQNVITKVLEFILEERD---------VPKAQRFVKQ 800
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISY 964
DL + L+ L ITK +K +Y+ ++A HV++A R+ + GD ++Y
Sbjct: 801 TIADLLQNRIDLSQLVITKAYSK--HDYSAKQA--HVELAERMRKRDPGSAPTLGDRVAY 856
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+I + G + + + L+N+ L IDV YYL QQ+ + R+ PI G
Sbjct: 857 VIIKTGGDKNYEKSEDPLYVLENS--LPIDVKYYLDQQLTKPLERIFIPILG 906
>gi|388580039|gb|EIM20357.1| putative delta DNA polymerase [Wallemia sebi CBS 633.66]
Length = 1060
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 214/420 (50%), Gaps = 56/420 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPE 685
Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT +L + L E
Sbjct: 539 YEGATVIEPRRGYYDVPITTLDFSSLYPSIMMAHNLCYTT----LLDPQTVERLKLKEGE 594
Query: 686 HQVDT-------------GILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQK 729
+ T G+LP ++ L+ +R++ +A +K P + L D RQ
Sbjct: 595 DYIKTPNNDMFVTPVKRKGLLPVVLQDLISARKRARADIKSEKDPFRRAVL----DGRQL 650
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NY----EV 780
ALK++ANS+YG G + P+++ TA GR ++ TK VE+ NY EV
Sbjct: 651 ALKVSANSVYGFTGATIGKLPCLPISSSTTAYGRRMIERTKEEVESHYKVSNNYSHDAEV 710
Query: 781 IYGDTDSLMISCNVNDYDSVFKIGNQIKSE-CNKLYKQLELDIDGVYKYMLLLKKKKYAA 839
+YGDTDS+MI D ++ K+G + +K ++L+ + VY LL+ KK+YA
Sbjct: 711 VYGDTDSVMIKFGCRDLETAMKLGAEAAGVISSKFPNPIKLEFEKVYYPYLLINKKRYAG 770
Query: 840 LSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
L + L KM + KG++ VRRD +L + ++L +D ++
Sbjct: 771 LYWTGLEKYDKM----DTKGIETVRRDNCRLVGTVITTCLHKML---------IDRDVKA 817
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
++ K + ++L + ++ L ITK LTK EY ++A HV +A R+ ++
Sbjct: 818 AEDYTKHVISELLQNKIDMSQLVITKALTKT--EYDAKQA--HVCLAERMRKRDAGSAPA 873
Query: 959 -GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
GD ++Y+I + AA +R+ + + L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 874 LGDRVAYVIVKGSKGAAAYERSEDPLFVLENN--VPIDTKYYLENQLSKPLLRIFEPILG 931
>gi|327352438|gb|EGE81295.1| DNA polymerase [Ajellomyces dermatitidis ATCC 18188]
Length = 1106
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 170/629 (27%), Positives = 294/629 (46%), Gaps = 100/629 (15%)
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK--YAFNLPGVP--DLS 484
YLL R+EHLK S +S IA++ F S++I + + N+ G DL
Sbjct: 403 YLLKRAEHLK----CSGFHFWSRLKHIASRVGDARFSSKQIGNRESKSTNISGRIQLDLL 458
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK---- 540
+ ++ Y + L S + G + + + ++ G P++ +
Sbjct: 459 QLIQRDYQLRSYTLNS-----VCAQFLGEQKEDVHHTMITELFNGT-----PDSRRRLAV 508
Query: 541 -------FPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFH 591
P R+ K N E R+T V N L R ++ +FL L
Sbjct: 509 YCLKDAYLPQRL-MDKLMCLVNYTEMARVTGVPFNFLL-----SRGQQVKFLSQLFRKAL 562
Query: 592 EKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
E+ V+P+ +N+ E+ Y G V+EP + +YD I +DF SL
Sbjct: 563 EQQLVIPNL---RNESTSEQ--------------YEGATVIEPIRDYYDVPIATLDFASL 605
Query: 652 YPSIIQEYNICFTTI---------PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVE 702
YPSIIQ +N+C+TT+ ++ +D +T + +V G+L +++L+
Sbjct: 606 YPSIIQAHNLCYTTLLKKSTIDTHQMKEGEDYIVTPNGDRFCTSKVRKGLLTQILEELLG 665
Query: 703 SRRQVKALMKQPNLSSDLLMQYDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTA 760
+R++ K K+ + +D + + RQ ALK++ANS+YG G R P+A+ T+
Sbjct: 666 ARKRAK---KELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGRLPCLPIASSTTS 722
Query: 761 KGREILLNTKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC 811
GR+++ TK VE + + +V+YGDTDS+M+ + D K+G +
Sbjct: 723 YGRQMIEKTKEEVEAKFTIANGYSHDAKVVYGDTDSVMVKFGMQDLAEAMKLGREAADFV 782
Query: 812 N-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQL 869
+ K K ++L+ + VY LL+ KK+YA L ++ KM + KG++ VRRD ++
Sbjct: 783 SAKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKYDKM----DTKGIETVRRDNCRM 838
Query: 870 ASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKA 929
+ V+ +IL +D + ++K +DL + ++ L ITK L+K
Sbjct: 839 VQTVIETVLRKIL---------IDRDVGAAQSYVKDTISDLLQNKIDMSKLVITKALSK- 888
Query: 930 PEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKN 987
++YT ++A HV++A R+ ++ GD ++Y+I + G S+ + I L+N
Sbjct: 889 -KDYTAKQA--HVELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLEN 945
Query: 988 NSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
N + ID YYL Q+ +TR+ EPI G
Sbjct: 946 N--IPIDTKYYLDNQLAKPLTRIFEPILG 972
>gi|241957481|ref|XP_002421460.1| DNA polymerase III, putative; DNA polymerase delta catalytic subunit,
putative [Candida dubliniensis CD36]
gi|223644804|emb|CAX40796.1| DNA polymerase III, putative [Candida dubliniensis CD36]
Length = 1040
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 215/412 (52%), Gaps = 42/412 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------IPVRMLQDSDITTL 679
Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT I L + D T
Sbjct: 518 YEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKT 577
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y ++ GILP+ + +L+ +R++ KA +K+ D+L + RQ ALK++A
Sbjct: 578 PNGDYFVNSKLRKGILPTILDELLTARKKAKADLKKETDPFKKDVL---NGRQLALKISA 634
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 635 NSVYGFTGATVGKLPCLAISSSVTAFGREMIEKTKNEVQEYYSRKNGHPYDAKVIYGDTD 694
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + + +K ++L+ + VY LL+ KK+YA L ++
Sbjct: 695 SVMVKFGYQDLETCMKLGEEAANYVSTKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTR- 753
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+ + KG++ VRRD +L V+ IL+E+ + +K+
Sbjct: 754 --PEKFDKMDTKGIETVRRDNCRLVQNVITKVLEFILEERD---------VPKAQRFVKQ 802
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISY 964
DL + L+ L ITK +K +Y+ ++A HV++A R+ + GD ++Y
Sbjct: 803 TIADLLQNRIDLSQLVITKAYSK--HDYSAKQA--HVELAERMRKRDPGSAPTLGDRVAY 858
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+I + G + + + L+N+ L IDV YYL QQ+ + R+ PI G
Sbjct: 859 VIIKTGGDKNYEKSEDPLYVLENS--LPIDVKYYLDQQLTKPLERIFIPILG 908
>gi|335290039|ref|XP_003127412.2| PREDICTED: DNA polymerase delta catalytic subunit [Sus scrofa]
Length = 1107
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N ME R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 528 VLVNAMEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMREGLLMP-----VVKTEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPITTLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 AAQKLGLTADQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYGTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPAPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKL--SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S ++ +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDTHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|77022890|ref|XP_888889.1| hypothetical protein CaO19_5182 [Candida albicans SC5314]
gi|76573702|dbj|BAE44786.1| hypothetical protein [Candida albicans]
Length = 1038
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 214/412 (51%), Gaps = 42/412 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------IPVRMLQDSDITTL 679
Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT I L + D T
Sbjct: 516 YEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKT 575
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ + +L+ +R++ KA +K+ D+L + RQ ALK++A
Sbjct: 576 PNGDYFVHSNLRKGILPTILDELLTARKKAKADLKKETDPFKKDVL---NGRQLALKISA 632
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 633 NSVYGFTGATVGKLPCLAISSSVTAFGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTD 692
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + + +K ++L+ + VY LL+ KK+YA L ++
Sbjct: 693 SVMVKFGYQDLETCMKLGEEAANYVSTKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTR- 751
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+ + KG++ VRRD +L V+ IL+E+ + +K+
Sbjct: 752 --PEKFDKMDTKGIETVRRDNCRLVQNVITKVLEFILEERD---------VPKAQRFVKQ 800
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISY 964
DL + L+ L ITK +K +Y+ ++A HV++A R+ + GD ++Y
Sbjct: 801 TIADLLQNRIDLSQLVITKAYSK--HDYSAKQA--HVELAERMRKRDPGSAPTLGDRVAY 856
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+I + G + + + L+N+ L IDV YYL QQ+ + R+ PI G
Sbjct: 857 VIIKTGGDKNYEKSEDPLYVLENS--LPIDVKYYLDQQLTKPLERIFIPILG 906
>gi|324120710|dbj|BAJ78746.1| DNA polymerase delta catalytic subunit [Karoophasma biedouwense]
Length = 992
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 236/489 (48%), Gaps = 69/489 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL ++ Y++P ++
Sbjct: 424 NYMEMARVTGV---PLSCLLTRGQQIKVVSQLLRKAKDRGYLIPAYSGAPQDEQ------ 474
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ G V+EPKKG+Y I +DF+SLYPSI+ +N+C+TT+ + +DS
Sbjct: 475 -----------FEGATVIEPKKGYYADPIATLDFSSLYPSIMMAHNLCYTTLLRQGAKDS 523
Query: 675 DI------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
T + V G+LP ++ L+ +R++ KA +K L +D Q D
Sbjct: 524 LTPDQYTKTPASNLFVKASVRKGLLPEILENLLAARKKAKADLK---LETDPFKQKVLDG 580
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE-- 779
RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE Y+
Sbjct: 581 RQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRVMIEQTKQEVEQQFNVANGYQHD 640
Query: 780 --VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+MI V + +G + + + K ++L+ + VY LL+ KK+
Sbjct: 641 AVVIYGDTDSVMIKFGVKSLEEAMSLGREAAAFVSAKFVHPIKLEFEKVYFPYLLINKKR 700
Query: 837 YAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYSL 892
YA L +K + KM C KG++ VRRD L + + ++L D +Y+
Sbjct: 701 YAGLYFTKPDHYDKMDC----KGIETVRRDNCPLVANMMNTCLQKLLINRDPDGAVNYA- 755
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
K++ +DL + ++ L ITK+L K+ +Y ++A HV++A ++ +
Sbjct: 756 -----------KQVISDLLCNRIDISQLVITKELAKS--DYAAKQA--HVELAAKMKKRD 800
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ K GD + Y+I + A Q+A + I L+NN + ID +YYL Q+ + R+
Sbjct: 801 AGTAPKLGDRVPYVIIAAAKNTPAYQKAEDPIYVLENN--IPIDSSYYLDNQLSKPLLRI 858
Query: 1011 LEPIEGTDA 1019
PI G A
Sbjct: 859 FSPILGDKA 867
>gi|149757884|ref|XP_001493912.1| PREDICTED: DNA polymerase delta catalytic subunit [Equus caballus]
Length = 1107
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 233/488 (47%), Gaps = 63/488 (12%)
Query: 552 VQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE 611
V N +E R+T V LS L G+ + LL + V+P K EG E
Sbjct: 528 VLVNAVEMARVTGV---PLSYLLSRGQQVKVVSQLLRQAMREGLVMP-----VVKTEGGE 579
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----- 666
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 580 D-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGA 626
Query: 667 --PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L +
Sbjct: 627 AQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLRR 683
Query: 724 --YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 684 QVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIERTKQLVESKYTTEN 743
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLL 831
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY LL
Sbjct: 744 GYSASAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLL 803
Query: 832 LKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 804 ISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------- 852
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D H +++ +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 --IDRDPNGAVAHAQEVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERMR 908
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 909 KRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPLL 967
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 968 RIFEPILG 975
>gi|298714506|emb|CBJ27528.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1097
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 237/485 (48%), Gaps = 65/485 (13%)
Query: 549 KYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKE 608
K V N +E R+T V N L L G+ + +LL + ++P+ +E
Sbjct: 531 KLSVMVNYIEMARVTGVPLNFL---LSRGQQIKVFSMLLRKTRSVNLLIPNLPKHAVDQE 587
Query: 609 GEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV 668
Y G V+EPKK FY++ I +DF SLYPSI+Q YN+C++T+
Sbjct: 588 ----------------TYEGATVIEPKKAFYEEPIATLDFASLYPSIMQAYNLCYSTLVA 631
Query: 669 -----RMLQDSDITTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
++ D +T+ + + +V G+LP+ + +L+ +R+Q K M + +
Sbjct: 632 GEDKNKLKPDQYLTSPSGDVFVKSEVTKGLLPAILDELLTARKQAKRDMAAATDPMEKAV 691
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-------- 774
Q + RQ ALK++ANS+YG G + P+A+ T+ GR++L T+S VE
Sbjct: 692 Q-NGRQLALKVSANSVYGFTGATVGQLPCLPIASSTTSYGRDLLFRTRSYVEETYTVANG 750
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLL 832
+ + +V+YGDTDS+M+ + + E +K++ + ++L+ + VY LL+
Sbjct: 751 YDHDADVVYGDTDSVMVKFGSKTVAEAMPLAEKAAEEVSKIFPRPIKLEFEKVYWPYLLM 810
Query: 833 KKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KK+YA L +K+ KM + KG++ VRRD L + + ++L
Sbjct: 811 NKKRYAGLLWTKVDKYDKM----DTKGLETVRRDNCLLVRKVVDTCLRKVL--------- 857
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAP--EEYTDRKALPHVQVALRLN 949
+D +Q + K++ ++L + ++LL ITK L K+ E YT ++A HV++A+R+
Sbjct: 858 IDRDVQGAITYSKQVISELLQNRMDISLLVITKSLGKSADSEGYTAKQA--HVELAMRM- 914
Query: 950 NTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
K + T E + Y +E NN L ID YYL+ Q+ ++R
Sbjct: 915 -----KKRDPGTAPNAAKGAAAYERSEDPVYVLE---NN--LPIDTEYYLTNQLSKPLSR 964
Query: 1010 LLEPI 1014
L EPI
Sbjct: 965 LFEPI 969
>gi|119175148|ref|XP_001239851.1| hypothetical protein CIMG_09472 [Coccidioides immitis RS]
gi|392870043|gb|EAS28595.2| DNA polymerase (pol2) [Coccidioides immitis RS]
Length = 1110
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 240/487 (49%), Gaps = 68/487 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+P+ + + GEE
Sbjct: 533 NYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKALEQDLVIPNLK----NENGEEQ 583
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP K +YD I +DF SLYPSIIQ +N+C+TT+
Sbjct: 584 -------------YKGATVIEPVKDYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKTSV 630
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+ + +D D +T + +V G+L +++L+ +R++ K K+ + +D +
Sbjct: 631 EKLNLKKDEDYIVTPNGDMFCTSKVRKGLLSQILQELLSARKRAK---KELAVETDPFKK 687
Query: 724 YDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN------ 775
+ RQ ALK++ANS+YG G N + +A+ T+ GR++++ TK VE
Sbjct: 688 AVLNGRQLALKISANSVYGITGASNGKLPCLAIASSTTSYGRQMIMKTKDEVEARFTMAN 747
Query: 776 ---LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLL 831
+ +VIYGDTDS+M+ V D K+G + + K + ++L+ + VY LL
Sbjct: 748 GYPYDAKVIYGDTDSVMVKFGVKDIAEAMKLGQEAADFVSAKFLEPIKLEFEKVYFPYLL 807
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
+ KK+YA L +N + KG++ VRRD +L + V+ +IL
Sbjct: 808 INKKRYAGLF---WTNPNKFDKMDSKGIETVRRDNCRLVQTVIETVLKKIL--------- 855
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D + ++K DL V ++ L ITK L+K+ +Y+ ++A HV++A R+
Sbjct: 856 IDRDVNGAESYVKDTIADLLQNKVDMSKLVITKALSKS--DYSAKQA--HVELAERMRKR 911
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+ GD ++Y+I + T +++ + I L+NN + ID YYL Q+ + R
Sbjct: 912 DVGSAPTLGDRVAYVIVKGATGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLAKPLAR 969
Query: 1010 LLEPIEG 1016
+ +PI G
Sbjct: 970 IFDPILG 976
>gi|5011|emb|CAA41968.1| catalytic subunit DNA polymerase delta [Schizosaccharomyces pombe]
Length = 1084
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 157/559 (28%), Positives = 260/559 (46%), Gaps = 100/559 (17%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP KG+YD I +DF+SLYPSI+Q +N+C+TT+ +++ QD D +
Sbjct: 566 YEGATVIEPIKGYYDTPIATLDFSSLYPSIMQAHNLCYTTLLDSNTAELLKLKQDVDYSV 625
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKL 733
T +Y + V G+LP + L+ +R++ KA +K+ P + L D RQ ALK+
Sbjct: 626 TPNGDYFVKPHVRKGLLPIILADLLNARKKAKADLKKETDPFKKAVL----DGRQLALKV 681
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G N R +++ VT+ GR+++ TK +VE + + VIYGD
Sbjct: 682 SANSVYGFTGATNGRLPCLAISSSVTSYGRQMIEKTKDVVEKRYRIENGYSHDAVVIYGD 741
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYM--LLLKKKKYAALSI 842
TDS+M+ V K+G + N + Q I+ + LL+ KK+YA L
Sbjct: 742 TDSVMVKFGVKTLPEAMKLGEE---AANYVSDQFPNPINWSFSTFPYLLISKKRYAGLFW 798
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
++ + S KG++ VRRD L S + ++L +D ++
Sbjct: 799 TRTDTYDKMDS---KGIETVRRDNCPLVSYVIDTALRKML---------IDQDVEGAQLF 846
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA-LPHVQVALRLNNTNSKKLKQ-GD 960
KK+ +DL + ++ ITK L+K TD A + HV++A R+ ++ GD
Sbjct: 847 TKKVISDLLQNKIDMSQHVITKALSK-----TDYAAKMAHVELAERMRKRDAGSAPAIGD 901
Query: 961 TISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
++Y+I + + R+ + I L+NN + ID YYL Q+ + R+ EPI G A
Sbjct: 902 RVAYVIIKGAQGDQFYMRSEDPIYVLENN--IPIDAKYYLENQLSKPLLRIFEPILGEKA 959
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNT 1079
+SL +I + ++ G+ +F K E TC+ CK
Sbjct: 960 ----------SSLLHGDHTRTISMAAPSVGGI-------MKFAVKVE-TCL--GCK---- 995
Query: 1080 VEAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC--- 1136
AP + G + + C+N + L + +N V++ W +C
Sbjct: 996 --APIK---KGKTALCENCLNRSAE---------LYQRQVAQVNDLEVRFARLWTQCQRC 1041
Query: 1137 -----EDPGCSDLTRRCPL 1150
+D C+ +R CP+
Sbjct: 1042 QGSMHQDVICT--SRDCPI 1058
>gi|324120722|dbj|BAJ78752.1| DNA polymerase delta catalytic subunit [Forficula hiromasai]
Length = 1120
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 234/491 (47%), Gaps = 67/491 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL + Y++P G+E
Sbjct: 552 NYMEMSRVTGVS---LSSLLTRGQQVKVVSQLLRHSRARGYLMP----AHTXSAGDEQ-- 602
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT--------- 665
+ G V+EP++G+Y I +DF+SLYPSI+ +N+C+TT
Sbjct: 603 -----------FEGATVIEPRRGYYPHPIATLDFSSLYPSIMMAHNLCYTTLVPPNKRNI 651
Query: 666 IPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-Y 724
+P L + L + V G+LP ++ L+ +R+Q KA +K N + Q
Sbjct: 652 VPADQLTHTPANNL---FVKASVRKGLLPEILEDLLAARKQAKADLK--NETDPFKKQVL 706
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G R +++ VTA GR+++ +TK VEN
Sbjct: 707 DGRQLALKISANSVYGFTGAQVGRLPCLEISSSVTAYGRQMIESTKQEVENKYNVSNGYD 766
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
+ VIYGDTDS+M++ V D ++G + + K ++L+ + VY LL+ K
Sbjct: 767 HDSMVIYGDTDSVMVNFGVKDIAEAMRLGKEAADYVSAKFINPIKLEFEKVYYPYLLINK 826
Query: 835 KKYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ + KM C KG++ VRRD L + + ++L +D
Sbjct: 827 KRYAGLYFTRPDKHDKMDC----KGIETVRRDSCPLVASVMNTSLEKLL---------ID 873
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
E++K I L + ++ L +TK+L K +Y ++A HV++A ++ ++
Sbjct: 874 RDPDGAVEYVKYIIAQLLCNKIDISKLVVTKELAKV--DYAGKQA--HVELANKMRKRDA 929
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K GD + Y+ + A + + I L+NN + ID +YYL Q+ + R+
Sbjct: 930 GTAPKLGDRVPYVFIAGPKNTPAYMKVEDPIYVLENN--IPIDFSYYLDNQLSKPLLRIF 987
Query: 1012 EPIEGTDAVRI 1022
EPI G A I
Sbjct: 988 EPILGDRAESI 998
>gi|324120764|dbj|BAJ78773.1| DNA polymerase delta catalytic subunit [Stenopsyche marmorata]
Length = 1000
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 213/417 (51%), Gaps = 45/417 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQDSDI-------T 677
Y G V++P KG+Y I +DF SLYPSI+ +N+C+TT +P M + +I T
Sbjct: 479 YEGATVIDPLKGYYSNPIATLDFASLYPSIMMAHNLCYTTLLPNHMKEKLNITDDQVTRT 538
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKLT 734
+ V G+LP ++ L+ +R++ KA +K+ P S L D RQ ALK++
Sbjct: 539 PSNNMFVKSTVRKGLLPEILESLLGARKKAKADLKEETDPFKRSVL----DGRQLALKIS 594
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE----VIYGDT 785
ANS+YG G + +++ VT+ GR ++ TK VE Y+ VIYGDT
Sbjct: 595 ANSVYGFTGAQVGKLPCLEISSSVTSYGRSMIEQTKQEVEQRYTKANGYDEDAIVIYGDT 654
Query: 786 DSLMISCNVNDYDSVFKIG-NQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M++ + K+G N + +K K ++L+ + Y LL+ KK+YA L +K
Sbjct: 655 DSVMVNFGTTSLEESMKLGRNAAEFVSSKFIKPIKLEFEKCYFPYLLINKKRYAGLYFTK 714
Query: 845 LSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
KM C KG++ VRRD S L S + ++L +D + E+
Sbjct: 715 PDKYDKMDC----KGIETVRRDNSPLVSNLMSTCLQKVL---------IDRDPKGAVEYA 761
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQGDTI 962
K+I DL + ++ L ITK+L+K+ +Y ++A HV++A ++ + K GD +
Sbjct: 762 KQIIADLLCNRIDISQLVITKELSKS--DYAAKQA--HVELAAKMKKRDPGTAPKLGDRV 817
Query: 963 SYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
Y++C + A +A + + NS + ID +YYL Q+ + RL EPI G A
Sbjct: 818 PYVLCSAAKNVPAYMKAEDPIYVLENS-IPIDFDYYLHNQLSKPLLRLFEPIYGDKA 873
>gi|125977976|ref|XP_001353021.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
gi|54641772|gb|EAL30522.1| GA19253 [Drosophila pseudoobscura pseudoobscura]
Length = 1092
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 239/494 (48%), Gaps = 67/494 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL K Y++P + ++
Sbjct: 515 NYMEMARVTGVSLECL---LTRGQQIKVLSQLLRKAKTKGYIMPSYTPQGSDEQ------ 565
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR----- 669
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ +
Sbjct: 566 -----------YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLVLGGSREK 614
Query: 670 -----MLQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
LQD + T Y + +V G+LP ++ L+ +R++ K +K + +D
Sbjct: 615 LREKDGLQDEQVVRTPANNYFVKSEVRRGLLPEILESLLAARKRAKNDLK---VETDPFK 671
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---- 776
+ D RQ ALK++ANS+YG G + ++ VTA GR ++ TK+ VE+
Sbjct: 672 RKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIELTKNEVESHYTRE 731
Query: 777 -NYE----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYML 830
YE VIYGDTDS+M++ V + ++G + + K ++L+ + VY L
Sbjct: 732 NGYENDAVVIYGDTDSVMVNFGVKTLERSMELGREAAELVSAKFVHPIKLEFEKVYYPYL 791
Query: 831 LLKKKKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
L+ KK+YA L ++ + KM C KG++ VRRD S L + + ++L E+ D
Sbjct: 792 LINKKRYAGLYFTRPEAYDKMDC----KGIETVRRDNSPLVANLMNSCLQKLLIERD-PD 846
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
++ + K++ DL + ++ L ITK+L K +Y ++A HV++A ++
Sbjct: 847 GAVT--------YAKQVIADLLCNRIDISQLVITKELAKT--DYAAKQA--HVELAAKMK 894
Query: 950 NTNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ K GD + Y+IC + A +A + + NS + ID YYL QQ+ +
Sbjct: 895 KRDPGTAPKLGDRVPYVICAAAKNTPAYAKAEDPLYVLENS-VPIDATYYLEQQLSKPLL 953
Query: 1009 RLLEPIEGTDAVRI 1022
R+ EPI G A I
Sbjct: 954 RIFEPILGEKAESI 967
>gi|440804295|gb|ELR25172.1| polymerase (DNA directed), delta 1, catalytic subunit [Acanthamoeba
castellanii str. Neff]
Length = 1003
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 221/428 (51%), Gaps = 45/428 (10%)
Query: 607 KEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI 666
K + TGE KG Y G +V+ PK +YD I +DF SLYPSI+ +N+C++T+
Sbjct: 463 KVAKPTGEDGKG-------YKGAIVIAPKTAYYDVPIATLDFASLYPSIMIAHNLCYSTL 515
Query: 667 PVRMLQDSDITTLCEYLP------EHQVDTGILPSEIKKLVESRRQVKALM-KQPNLSSD 719
+S E P + G+LP + L+E+R + KA M K+ N
Sbjct: 516 LAPGEVNSHPPESYERSPGGECFVREETKPGLLPRILNGLLEARARAKAEMKKETNPFKQ 575
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSL------V 773
++ + RQ ALK++ANS+YG G + +++ VTA GRE++ T++ V
Sbjct: 576 AVL--NGRQLALKVSANSVYGFTGATIGKLPCLAISSAVTAYGREMIEKTQATVLERYRV 633
Query: 774 EN---LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNK--LYKQLELDIDGVYKY 828
EN +VIYGDTDS+M++ V + K+G + K + ++L+ + VY
Sbjct: 634 ENGYSHTADVIYGDTDSVMVNFGVKTVEEAMKLGREAAEYITKHCFEQPIKLEFEKVYYP 693
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
LL+ KK+YA L + + + KG++ VRRD L + + +IL E++
Sbjct: 694 YLLISKKRYAGLWWGRPDKYDHM---DAKGIETVRRDNCALVRNVVQECLDRILIERN-I 749
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
D ++D ++K+I +DL + L+LL ITKQ+++ E+Y ++A HV++A R+
Sbjct: 750 DSAVD--------YVKQIISDLLCNRLDLSLLVITKQISRNSEDYKAKQA--HVELAERM 799
Query: 949 NNTNSKKLK-QGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
++ GD + Y+I + A +RA + + L++N + +D YYL QQ+
Sbjct: 800 AKRDAGSAPVVGDRVPYVIVKGAKGSRAYERAEDPLHVLEHN--IPLDAQYYLHQQLEKP 857
Query: 1007 VTRLLEPI 1014
+ R+ +PI
Sbjct: 858 LLRIFKPI 865
>gi|355712611|gb|AES04406.1| polymerase , delta 1, catalytic subunit 125kDa [Mustela putorius
furo]
Length = 585
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 236/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N ME R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 7 VLVNAMEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMREGLLMP-----VVKTEGG 57
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 58 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 104
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKA-LMKQPN-LSSDL 720
+ + +D I T + + V G+LP ++ L+ +R++ KA L K+ + L +
Sbjct: 105 AAQRLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQV 164
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
L D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 165 L---DGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 221
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYML 830
N +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 222 NGYGANAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPPPIRLEFEKVYFTYL 281
Query: 831 LLKKKKYAALSISKL--SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S ++ +M C KG++ VRRD L + + ++L
Sbjct: 282 LISKKRYAGLLFSSRPDTHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 331
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 332 ---IDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 386
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 387 RKRDPGSAPSLGDRVPYVIIGATKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 445
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 446 LRIFEPILG 454
>gi|346974556|gb|EGY18008.1| DNA polymerase delta catalytic subunit [Verticillium dahliae VdLs.17]
Length = 1104
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 213/416 (51%), Gaps = 48/416 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TTI + + +D D +
Sbjct: 577 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTIVDKKAIEKLGLKKDEDYIV 636
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 637 TPAGNTFVTAKQRKGLLAQILEELLAARKQAKRELAVETDPFKKAVL----NGRQLALKV 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK VE + + +VIYGD
Sbjct: 693 SANSVYGLTGATTGKLPCLEIASSTTSFGRQMIEKTKEEVEAKYTIANGYSHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 753 TDSVMVKFGTKDLAEAMKLGEEAAGFVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWT 812
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D +Q E+
Sbjct: 813 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVQGAQEY 859
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K + DL V ++ L ITK LTK ++Y+ ++A HV++A R+ ++ GD
Sbjct: 860 VKDMIADLLQNKVDMSKLVITKALTK--DDYSAKQA--HVELAQRMKKRDAGSAPGLGDR 915
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + +++ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 916 VAYVMIKGAAGAKNYEKSEDPIFVLENN--VPIDTRYYLDNQLAKPLGRIFEPILG 969
>gi|189234183|ref|XP_967290.2| PREDICTED: similar to DNA polymerase delta catalytic subunit
[Tribolium castaneum]
Length = 1172
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 181/647 (27%), Positives = 304/647 (46%), Gaps = 83/647 (12%)
Query: 407 FVKENNSHSSCCVIVQNIDRKIYLLPRSEHLKTKE---PVSIAQVYSEFDQIATQYKI-- 461
FV+E + + N D YL+ R+ HLK K I + S + TQ KI
Sbjct: 328 FVRETDPDIFTGYNINNFDFP-YLIERANHLKLKRFDYLGRILDIRSSIKETVTQTKIGK 386
Query: 462 LDFKSRKIEKKYAFNLPGVPDLSEYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENL 521
FKS E + A+++ V + ++R S ++ ++ G+ V + + L+N
Sbjct: 387 RTFKSINFEGRVAYDMLMV--IKRDFKLR-SYTLNSVSQEILGEQKEDVHYSVITDLQNG 443
Query: 522 LLERKIKGPSWLEFPEAEKFPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSER 581
+ + + + +A+ P RI N +E R+T V ++ L G +
Sbjct: 444 DEQTRRRLAVYC-LKDAD-LPVRI-LSTVRSFTNDVEMARVTGV---PITSLLTKGEQVK 497
Query: 582 NEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDK 641
LL Y +P Q + ++ Y G V+EP++G+Y
Sbjct: 498 VVAQLLKHARAAGYFMPTHQGAPSSEQ-----------------YEGATVIEPRRGYYTD 540
Query: 642 FIILMDFNSLYPSIIQEYNICFTTI------PVRMLQDSDITTL---CEYLPEHQVDTGI 692
I +DF+SLYPSI+ +N+C+TT+ L D +TT C ++ + V G+
Sbjct: 541 PIATLDFSSLYPSIMIAHNLCYTTLIKPSIKEKLCLSDEQVTTTPANCMFV-KSSVRPGL 599
Query: 693 LPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLTANSMYGCLGFPNSRFF 750
LP ++ L+ +R++ KA +K+ ++D +++ D RQ A K++ANS+YG G +
Sbjct: 600 LPHILQHLLAARKKTKAELKE---ATDPVVRAVLDGRQLAYKISANSVYGFTGAQVGKLP 656
Query: 751 AQPLAALVTAKGREILLNTKSLVENL-----NYE----VIYGDTDSLMISCNVNDYDSVF 801
+++ VTA GR ++ TK VE YE VIYGDTDS+M++ V +
Sbjct: 657 CLEISSSVTAYGRTMIEQTKQEVEQHYRIENGYESDAMVIYGDTDSVMVNFRVKSLERSM 716
Query: 802 KIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGV 859
++G + + K K ++L+ + VY LL+ KK+YA L +K KM C KG+
Sbjct: 717 ELGREAADLISAKFIKPIKLEFEKVYWPYLLINKKRYAGLYFTKPDKYDKMDC----KGI 772
Query: 860 DVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTL 919
+ VRRD L + + ++L +D + KK+ +DL V ++
Sbjct: 773 ETVRRDNCTLVVDVINSCLRKLL---------IDKDPDGAVNYAKKVISDLLQNNVDISQ 823
Query: 920 LEITKQLTKAPEEYTDRKALPHVQVALRLNN---TNSKKLKQGDTISYIICEDGTSEAAT 976
L ITK+LTK +Y ++A HV+++ ++ N+ KL GD I Y+I + A
Sbjct: 824 LVITKELTK--NDYAAKQA--HVELSKKMTKRDPGNAPKL--GDRIPYVIIAGTKNSKAF 877
Query: 977 QRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
++A + I L+NN + ID YYL Q+ + R+ +PI G A I
Sbjct: 878 EKAEDPIYVLENN--IPIDSQYYLQNQLSKPLIRIFQPILGDSAESI 922
>gi|407927598|gb|EKG20487.1| DNA-directed DNA polymerase family B pol2 [Macrophomina phaseolina
MS6]
Length = 1097
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 213/414 (51%), Gaps = 44/414 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DF SLYPS+IQ +N+C+TT+ + + +D D +
Sbjct: 571 YEGATVIEPTRGYYDVPIATLDFASLYPSVIQAHNLCYTTLLNKNSVEKLGLKKDEDYIV 630
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + +V G+L ++L+ +R+Q K K+ L D + + RQ ALK++
Sbjct: 631 TPNGDLFCTTKVRKGLLTQIFEELLGARKQAK---KEMGLEQDPFKKAVLNGRQLALKIS 687
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G N + +A+ T+ GR+++ TK +VE + + +VIYGDT
Sbjct: 688 ANSVYGLTGATNGKLPCLAIASSTTSYGRQMIEKTKEVVEKHYTIANGYSHDAQVIYGDT 747
Query: 786 DSLMISCNVNDYDSVFKIGNQ-IKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ V + D ++G + K + K ++L+ + VY LL+ KK+YA L
Sbjct: 748 DSVMVKFGVKELDKTMELGEEAAKFVSSHFTKPIKLEFEKVYFPYLLINKKRYAGLY--- 804
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG++ VRRD +L Q + E S +D + + +K
Sbjct: 805 WTNPNKWDKMDTKGIETVRRDNCRLV---------QTVIETSLRMLLIDRDVNGAQDFVK 855
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ +DL + ++ L ITK L K+ +Y ++A HV++A R+ ++ GD ++
Sbjct: 856 ETISDLLQNKIDMSNLVITKALAKS--DYAAKQA--HVELAERMKKRDAGSAPALGDRVA 911
Query: 964 YIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I + +++ + I L+NN L ID YYL Q+ + R+ EPI G
Sbjct: 912 YVIVKGANDSKNYEKSEDPIYVLENN--LPIDTKYYLDNQLAKPLGRIFEPILG 963
>gi|342874671|gb|EGU76649.1| hypothetical protein FOXB_12838 [Fusarium oxysporum Fo5176]
Length = 1054
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 214/421 (50%), Gaps = 48/421 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQDSDITTLCEYLP 684
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT + + ++ ++ +Y+
Sbjct: 527 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVSKKAIEAFNLKKDEDYIV 586
Query: 685 EHQVDT--------GILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
DT G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 587 TPNGDTFVTIKQRKGLLAQILEELLAARKQAKRELAVETDPFKKAVL----NGRQLALKI 642
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK VEN + +VIYGD
Sbjct: 643 SANSVYGLTGATTGKLPCLEIASSTTSFGRKMIEKTKEEVENRYNIANGYSHDAQVIYGD 702
Query: 785 TDSLMISCNVNDYDSVFKIGNQI-KSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+MI D K+G + K K K ++L+ + VY LL+ KK+YA L +
Sbjct: 703 TDSVMIKFGTKDLQEAMKLGEEASKYVSAKFVKPIKLEFEKVYFPYLLINKKRYAGLYWT 762
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D +Q E+
Sbjct: 763 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVQGAQEY 809
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K+ DL V ++ L ITK LTK ++Y ++A HV++A R+ ++ GD
Sbjct: 810 VKETIADLLQNKVDMSKLVITKALTK--DDYAAKQA--HVELAQRMKKRDAGSAPGLGDR 865
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y++ +++ + I L++N + ID YYL Q+ + R+ EPI G
Sbjct: 866 VAYVMVRGPAGAKNFEKSEDPIYVLEHN--VPIDTRYYLDNQLAKPLGRIFEPILGETKA 923
Query: 1021 R 1021
R
Sbjct: 924 R 924
>gi|226289255|gb|EEH44767.1| DNA polymerase delta catalytic subunit [Paracoccidioides brasiliensis
Pb18]
Length = 1110
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 169/621 (27%), Positives = 298/621 (47%), Gaps = 84/621 (13%)
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK--YAFNLPGVP--DLS 484
YL+ R+EHLK +E +S Q+A++ F S++I + + N+ G DL
Sbjct: 407 YLIKRAEHLKCRE----FPFWSRLTQVASRVGDARFSSKQIGNRESKSTNISGRIQLDLL 462
Query: 485 EYLEVRYSAKCPALPS---DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
+ ++ + + L S G+ V T + L N + + + + +
Sbjct: 463 QLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTADSRRRLAVYC--LKDAYL 520
Query: 542 PSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPD 599
P R+ K+ N E R+T V N L R ++ +F+ L E+ V+P+
Sbjct: 521 PQRL-MDKFMCLVNYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKALEQQLVIPN 574
Query: 600 KQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEY 659
+N+ E+ Y G V+EP + +YD I +DF SLYPSIIQ +
Sbjct: 575 L---RNEATSEQ--------------YEGATVIEPLRAYYDVPIATLDFASLYPSIIQAH 617
Query: 660 NICFTTI---------PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKAL 710
N+C+TT+ ++ +D +T + +V G+L +++L+ +R++ K
Sbjct: 618 NLCYTTLLKKSTIEAHGMKEGEDYIVTPNGDRFCTAKVRKGLLTQILEELLGARKRAK-- 675
Query: 711 MKQPNLSSDLLMQYDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
K+ + +D + + RQ ALK++ANS+YG G + P+A+ T+ GR+++
Sbjct: 676 -KELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEK 734
Query: 769 TKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQL 818
TK VE + + +V+YGDTDS+M+ D K+G + +K + +
Sbjct: 735 TKEEVEAKYTIANGYSNDAQVVYGDTDSVMVKFGTKDLAEAMKLGQEAADYVSDKFIRPI 794
Query: 819 ELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFV 877
+L+ + VY LL+ KK+YA L +K KM + KG++ VRRD ++ + V
Sbjct: 795 KLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKM----DTKGIETVRRDNCRMVQTVIETV 850
Query: 878 ISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRK 937
+ +IL E+ D QN ++K +DL + ++ L ITK L+K ++YT ++
Sbjct: 851 LKKILIERDV------DGAQN---YVKNTISDLLQNKIDMSKLVITKALSK--KDYTAKQ 899
Query: 938 ALPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDV 995
A HV++A R+ ++ GD ++Y+I + +++ + I L+NN + ID
Sbjct: 900 A--HVELAERMKKRDAGSAPALGDRVAYVIVKGAGGSKNYEKSEDPIYVLENN--IPIDT 955
Query: 996 NYYLSQQIHPVVTRLLEPIEG 1016
YYL Q+ +TR+ EPI G
Sbjct: 956 KYYLDNQLAKPLTRIFEPILG 976
>gi|225682079|gb|EEH20363.1| DNA polymerase delta catalytic subunit [Paracoccidioides brasiliensis
Pb03]
Length = 1110
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 169/621 (27%), Positives = 298/621 (47%), Gaps = 84/621 (13%)
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK--YAFNLPGVP--DLS 484
YL+ R+EHLK +E +S Q+A++ F S++I + + N+ G DL
Sbjct: 407 YLIKRAEHLKCRE----FPFWSRLTQVASRVGDARFSSKQIGNRESKSTNISGRIQLDLL 462
Query: 485 EYLEVRYSAKCPALPS---DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
+ ++ + + L S G+ V T + L N + + + + +
Sbjct: 463 QLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTADSRRRLAVYC--LKDAYL 520
Query: 542 PSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPD 599
P R+ K+ N E R+T V N L R ++ +F+ L E+ V+P+
Sbjct: 521 PQRL-MDKFMCLVNYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKALEQQLVIPN 574
Query: 600 KQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEY 659
+N+ E+ Y G V+EP + +YD I +DF SLYPSIIQ +
Sbjct: 575 L---RNEATSEQ--------------YEGATVIEPLRAYYDVPIATLDFASLYPSIIQAH 617
Query: 660 NICFTTI---------PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKAL 710
N+C+TT+ ++ +D +T + +V G+L +++L+ +R++ K
Sbjct: 618 NLCYTTLLKKSTIEAHGMKEGEDYIVTPNGDRFCTAKVRKGLLTQILEELLGARKRAK-- 675
Query: 711 MKQPNLSSDLLMQYDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
K+ + +D + + RQ ALK++ANS+YG G + P+A+ T+ GR+++
Sbjct: 676 -KELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEK 734
Query: 769 TKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQL 818
TK VE + + +V+YGDTDS+M+ D K+G + +K + +
Sbjct: 735 TKEEVEAKYTIANGYSNDAQVVYGDTDSVMVKFGTKDLAEAMKLGQEAADYVSDKFIRPI 794
Query: 819 ELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFV 877
+L+ + VY LL+ KK+YA L +K KM + KG++ VRRD ++ + V
Sbjct: 795 KLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKM----DTKGIETVRRDNCRMVQTVIETV 850
Query: 878 ISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRK 937
+ +IL E+ D QN ++K +DL + ++ L ITK L+K ++YT ++
Sbjct: 851 LKKILIERDV------DGAQN---YVKNTISDLLQNKIDMSKLVITKALSK--KDYTAKQ 899
Query: 938 ALPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDV 995
A HV++A R+ ++ GD ++Y+I + +++ + I L+NN + ID
Sbjct: 900 A--HVELAERMKKRDAGSAPALGDRVAYVIVKGAGGSKNYEKSEDPIYVLENN--IPIDT 955
Query: 996 NYYLSQQIHPVVTRLLEPIEG 1016
YYL Q+ +TR+ EPI G
Sbjct: 956 KYYLDNQLAKPLTRIFEPILG 976
>gi|255549385|ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
gi|223545183|gb|EEF46693.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
Length = 1049
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 236/482 (48%), Gaps = 52/482 (10%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + LL +K+ V+P+ K+ G E G
Sbjct: 454 NYVEMARVTGV---PMSFLLSRGQSIKVLSQLLRKAKQKNLVIPNV-----KQAGSEQG- 504
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRM 670
+Y G VLE GFY+K I +DF SLYPSI+ YN+C+ T+ VR
Sbjct: 505 ----------SYEGATVLEANAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTPEDVRK 554
Query: 671 L----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQY 724
L + + T E + + GILP +++L+ +RR+ KA +K+ L +L
Sbjct: 555 LNLPPECVNKTPSGETFVKPNLQKGILPEILEELLAARRRAKADLKEAKDPLEKAVL--- 611
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G + +++ VT+ GR+++ +TK LVE+
Sbjct: 612 DGRQLALKVSANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTIMGGYE 671
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKK 834
N EVIYGDTDS+M+ V K+G + + + K ++L+ + VY LL+ K
Sbjct: 672 HNAEVIYGDTDSVMVQFGVPTVPEAMKLGREAAEYISGTFIKPIKLEFEKVYYPYLLISK 731
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L +N + KG + + ++ ++ E +D
Sbjct: 732 KRYAGLY---WTNSDKFDKMDTKGEQSTFQPLTICXXXXNCLLVKNLVTE-CLHKILIDR 787
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+ +++K +DL + L+LL ITK LTK ++Y + A HV++A R+ ++
Sbjct: 788 DVPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAA--HVELAERMRKRDAA 845
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD + Y+I + A +R+ + I L+NN + ID YYL QI + R+ E
Sbjct: 846 TAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN--IPIDPQYYLENQISKPLLRIFE 903
Query: 1013 PI 1014
PI
Sbjct: 904 PI 905
>gi|156086780|ref|XP_001610797.1| DNA polymerase delta subunit [Babesia bovis T2Bo]
gi|154798050|gb|EDO07229.1| DNA polymerase delta subunit [Babesia bovis]
Length = 1065
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 220/428 (51%), Gaps = 55/428 (12%)
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IP---VRM 670
A + +A+Y G VLEPKKG++ I ++DF SLYPSI+ +N+C++T +P
Sbjct: 537 AAQRAANSEASYEGATVLEPKKGYHRNAIAVLDFQSLYPSIMIAHNLCYSTLVPPADASK 596
Query: 671 LQDSDITTLCE----YLPEHQVDTGILPSEIKKLVESRRQVKALMK---QPNLSSDLLMQ 723
D+TT+ Y + V G+LP +++L+E+R++ K MK P L S L
Sbjct: 597 YPAEDLTTVPGHPGLYFIKAHVRKGMLPLIVERLIEARKKAKEEMKVCTDPMLRSVL--- 653
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFF-AQPLAALVTAKGREILLNTKSLVE-------- 774
D RQ ALK+T NS+YG G S F +A +T+ GR ++++TK +E
Sbjct: 654 -DGRQLALKITTNSVYGYTGASTSGFLPCVEVATAITSFGRYMIVDTKEKIESHFTKANG 712
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLL 832
+ + V+YGDTDS+MI+ D ++G Q + N+ K + L + VY +LLL
Sbjct: 713 YDTDASVVYGDTDSVMINFGTKDISRAIELGVQAAAMITNQAIKPITLLFEKVYLPLLLL 772
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +K I + KG++ VRRD+ L + + ++ +L D L
Sbjct: 773 AKKRYAGLYYTKADKYDKI---DCKGIETVRRDFCLLVQQMMERILHMLL-----VDLDL 824
Query: 893 DDRLQNIHEHMKK-IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+ ++ + + + +R ++D ++LL +TK L K +Y R LPHV++A +L
Sbjct: 825 NGAIEFVKSRISQLLRNEID-----ISLLVVTKSLGKV--DYDAR--LPHVELAKKLRQR 875
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRA----YNIEELKNNSKLKIDVNYYLSQQIHPV 1006
+ K GD +SY+I + ++ RA Y +E NN + +D +YL I
Sbjct: 876 DPGKAPSVGDRVSYLIVKGTKNQPQFDRAEEPLYVVE---NN--IPVDTQHYL-DAIKST 929
Query: 1007 VTRLLEPI 1014
+ R+ E I
Sbjct: 930 LMRIFEVI 937
>gi|312376112|gb|EFR23299.1| hypothetical protein AND_13138 [Anopheles darlingi]
Length = 1092
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 244/494 (49%), Gaps = 71/494 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL Y++P Q ++++
Sbjct: 519 NYMEMARVTGV---PLSCLLTRGQQIKVMSQLLRKSKVAGYLIPSYQSSGSEEQ------ 569
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G V+EPK+G+Y K I +DF SLYPSI+ +N+C+TT+ ++D
Sbjct: 570 -----------YEGATVIEPKRGYYAKPISTLDFASLYPSIMMAHNLCYTTLVQPNMKDK 618
Query: 675 --------DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMK---QPNLSSDLLMQ 723
T + V G+LP ++ L+ +R++ KA +K P S L
Sbjct: 619 LNLTPDQLTHTPANNVFVKASVRKGLLPEILESLLAARKRAKADLKVETDPFKRSVL--- 675
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NY 778
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE Y
Sbjct: 676 -DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEYTKQEVEQRYTVENGY 734
Query: 779 E----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
E VIYGDTDS+M++ V + ++G + + K K ++L+ + VY LL+
Sbjct: 735 ENDAVVIYGDTDSVMVNFGVETLERSMELGKEAADYVSAKFVKPIKLEFEKVYYPYLLIN 794
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM C KG++ VRRD S L + + ++L E++ D ++
Sbjct: 795 KKRYAGLYFTRPDRYDKMDC----KGIETVRRDNSPLVANLMNNCLQKLLIERN-PDGAI 849
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL---N 949
E+ K+ +DL + ++ L ITK+L+K+ +Y ++A HV++A ++ +
Sbjct: 850 --------EYAKQTISDLLCNRIDISQLVITKELSKS--DYAAKQA--HVELANKMRKRD 897
Query: 950 NTNSKKLKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
N+ KL GD + Y++ + A Q+A + I L+N + ID NYYL Q+ +
Sbjct: 898 PGNAPKL--GDRVPYVLIAAAKNTPAYQKAEDPIYVLENC--IPIDANYYLENQLSKPLL 953
Query: 1009 RLLEPIEGTDAVRI 1022
R+ EPI G A I
Sbjct: 954 RIFEPILGDKAESI 967
>gi|402906428|ref|XP_003916004.1| PREDICTED: DNA polymerase delta catalytic subunit [Papio anubis]
Length = 1107
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 237/489 (48%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V +LSR G + + LL A HE ++P + EG
Sbjct: 528 VLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHE-GLLMP-----VVRSEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 AAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKL--SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S ++ +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDTHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|302421082|ref|XP_003008371.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
gi|261351517|gb|EEY13945.1| DNA polymerase delta catalytic subunit [Verticillium albo-atrum
VaMs.102]
Length = 1055
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 213/416 (51%), Gaps = 48/416 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TTI + + +D D +
Sbjct: 528 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTIVDKKAIEKLGLKKDEDYIV 587
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 588 TPAGNTFVTAKQRKGLLAQILEELLAARKQAKRELAVATDPFKKAVL----NGRQLALKV 643
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK VE + + +VIYGD
Sbjct: 644 SANSVYGLTGATTGKLPCLEIASSTTSFGRQMIEKTKEEVEAKYTIANGYSHDAQVIYGD 703
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 704 TDSVMVKFGTKDLAEAMKLGEEAAGFVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWT 763
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D +Q E+
Sbjct: 764 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVQGAQEY 810
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K + DL V ++ L ITK LTK ++Y+ ++A HV++A R+ ++ GD
Sbjct: 811 VKDMIADLLQNKVDMSKLVITKALTK--DDYSAKQA--HVELAQRMKKRDAGSAPGLGDR 866
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + +++ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 867 VAYVMIKGAAGAKNYEKSEDPIFVLENN--VPIDTRYYLDNQLAKPLGRIFEPILG 920
>gi|444316824|ref|XP_004179069.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
gi|387512109|emb|CCH59550.1| hypothetical protein TBLA_0B07320 [Tetrapisispora blattae CBS 6284]
Length = 1104
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 227/446 (50%), Gaps = 51/446 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 594 YEGATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNLCYTTLCNKQIVNSLNLKLDEDYII 653
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + L+ +R++ K +K+ D+L + RQ ALK++
Sbjct: 654 TPNGDYFVTEKRRHGILPIILNDLISARKKAKNDLKKEKDPFKRDVL---NGRQLALKIS 710
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE----VIYGDT 785
ANS+YG G + +++ VT+ GR+++L TK+ V++ YE V+YGDT
Sbjct: 711 ANSVYGFTGATVGKLPCLAISSSVTSFGRKMILETKNAVQDKYSVKNGYEHDAVVVYGDT 770
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ +D ++G + + + L+K + L+ + VY LL+ KK+YA L
Sbjct: 771 DSVMVKFGTSDLKESMRLGTEAAAWVSTLFKHPINLEFEKVYFPYLLINKKRYAGLY--- 827
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ IL D ++D L E++K
Sbjct: 828 WTNPDKFDKLDQKGLASVRRDSCPLVSIVMNRVLKTIL-----IDRNVDGAL----EYVK 878
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
+ DL + ++ L I+K L AP +YT+ + PH +A R+ + GD + Y
Sbjct: 879 DVIDDLLHNRADISKLIISKTL--AP-QYTNPQ--PHAVLAARIKKRDGNGPNVGDRVDY 933
Query: 965 IICE--DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDA 1019
++ D A Y +E ++ID YYL+ Q+ +T ++EPI G +A
Sbjct: 934 VVTSGNDKLYNRAEDPLYALEH-----NIQIDSKYYLTNQLQNPLTSIIEPIIGERQANA 988
Query: 1020 VRIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + + ++T ++ + I++ E
Sbjct: 989 MFLVKSIKINTGNMKTGLMGFIKKVE 1014
>gi|310792587|gb|EFQ28114.1| DNA polymerase family B [Glomerella graminicola M1.001]
Length = 1103
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 213/416 (51%), Gaps = 48/416 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT+ ++ +D D +
Sbjct: 576 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVNKKAIEKFQLKKDDDYIV 635
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 636 TPNGDTFVTTKQRKGLLAQILEELLTARKQAKRELAMETDPFKKAVL----NGRQLALKI 691
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +A+ T+ GR++++ TK VE + + +VIYGD
Sbjct: 692 SANSVYGLTGATTGKLPCLEIASSTTSFGRQMIMKTKEEVEKKYCIANGYSHDAQVIYGD 751
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K G + + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 752 TDSVMVKFGTKDLPEAMKFGEEAAAYVSSKFVKPIKLEFEKVYYPYLLINKKRYAGLYWT 811
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D +Q ++
Sbjct: 812 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVQGAQDY 858
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K DL V ++ L ITK LTK ++Y ++A HV++A R+ ++ GD
Sbjct: 859 VKDTIADLLQNKVDMSKLVITKALTK--DDYAAKQA--HVELAQRMKKRDAGSAPGLGDR 914
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + +++ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 915 VAYVMIKGAAGSKNYEKSEDPIYVLENN--VPIDTKYYLDNQLAKPLGRIFEPILG 968
>gi|301090780|ref|XP_002895592.1| DNA polymerase delta catalytic subunit [Phytophthora infestans T30-4]
gi|262097769|gb|EEY55821.1| DNA polymerase delta catalytic subunit [Phytophthora infestans T30-4]
Length = 1609
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 221/442 (50%), Gaps = 42/442 (9%)
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
+ + + Y G V+EPKK FY I +DF SLYPSI+Q +N+C++T ++ D+
Sbjct: 517 RSQNNEDVGYEGATVIEPKKAFYSVPIATLDFASLYPSIMQAFNLCYST----LVAPGDV 572
Query: 677 TTLC----EYLPEHQV------DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
L E P + GILP +++++ +R+Q K M ++ +Q +
Sbjct: 573 DKLAPGDYEKSPSGDIFVTSKKKKGILPLILEEVLAARKQAKRDMNAATDPMEIAVQ-NG 631
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LN 777
RQ ALK++ANS+YG G + P+A+ TA GR++L T+ VE +
Sbjct: 632 RQLALKVSANSVYGFTGAIVGQMPCIPIASSTTAYGRQLLFRTREEVEREYTIANGYKAD 691
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKK 836
+V+YGDTDS+MI V+ + + + + ++ ++L+ + VY LL+ KK+
Sbjct: 692 AQVVYGDTDSVMIKFGVDTVEEAMPLAEEAAKRVSDIFPNPIKLEFEKVYFPYLLMNKKR 751
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YA L +K + S KG++ VRRD L V+ +IL ++ +
Sbjct: 752 YAGLLWTKPETYDKLDS---KGLETVRRDNCLLVRRMVDTVLRKIL---------INRDV 799
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+ + K I +DL + ++LL ITK L K ++ + H ++A R+ +
Sbjct: 800 PSAISYTKNIISDLLQNRIDISLLVITKGLKKTVDQDDYKVKQAHTELAERMRKRDPGSA 859
Query: 957 KQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
G+ I+Y+I + G + ++A + + L+NN + ID +YY+ QQ+ + R+ EPI
Sbjct: 860 PALGERIAYVIIDKGKATPLYEKAEDPVYALENN--IPIDCDYYMKQQLQNPLERIFEPI 917
Query: 1015 EGTDAVRIAECLGLDTSLYRSQ 1036
G V+ ++ L +L RS+
Sbjct: 918 IGLSKVK-SDLLNGAHTLKRSK 938
>gi|242018791|ref|XP_002429857.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
gi|212514875|gb|EEB17119.1| DNA polymerase delta catalytic subunit, putative [Pediculus humanus
corporis]
Length = 1096
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 239/501 (47%), Gaps = 85/501 (16%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL EK Y++P N +E
Sbjct: 523 NYMEMARVTGV---PLSCLLTRGQQIKVVSQLLRKTKEKHYLMPTH----NSVGSDE--- 572
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
+ G V+EPKKG+Y I +DF+SLYPSI+ +N+C+TT+
Sbjct: 573 ----------QFEGATVIEPKKGYYPDPIATLDFSSLYPSIMMAHNLCYTTLLRPGVKEK 622
Query: 668 VRMLQDSDITTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-YD 725
+ + D TT + + + G+LP ++ L+ +R++ K +K N + Q D
Sbjct: 623 LNLEPDKYSTTPSNHFFVKKSIRKGLLPEILENLLTARKKAKTDLK--NETDPFKKQVLD 680
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNY------- 778
RQ ALK++ANS+YG G + ++ VT+ GR ++ TK VE + Y
Sbjct: 681 GRQLALKISANSVYGFTGAQVGKLPCLEISGSVTSYGRSMIEQTKQEVE-MKYNIANGYK 739
Query: 779 ---EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ------------LELDID 823
EVIYGDTDS+MI K GN+ EC +L ++ ++L+ +
Sbjct: 740 HDSEVIYGDTDSVMI-----------KFGNKTLEECMELGREAAVYVSSKFISPIKLEFE 788
Query: 824 GVYKYMLLLKKKKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL 882
VY LL+ KK+YA L +K + KM C KG++ VRRD S L + + +IL
Sbjct: 789 KVYFPYLLISKKRYAGLYFTKTDTYDKMDC----KGLETVRRDNSPLVANMITTCLQKIL 844
Query: 883 DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHV 942
++ D N + KK+ +DL + ++ L ITK+LTK +Y ++A HV
Sbjct: 845 INRN------PDEAVN---YAKKVISDLLCNKIDISQLVITKELTK--NDYAAKQA--HV 891
Query: 943 QVALRLNNTNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQ 1001
++A ++ + K GD + Y+IC A RA + + NS + ID NYYL
Sbjct: 892 ELAQKMKKRDPGTAPKLGDRVPYVICCATKGTPAYCRAEDPIYVLENS-VPIDFNYYLEN 950
Query: 1002 QIHPVVTRLLEPIEGTDAVRI 1022
QI + R+ EPI G A I
Sbjct: 951 QISKPLLRIFEPILGEKAESI 971
>gi|145342057|ref|XP_001416112.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576336|gb|ABO94404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 982
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 242/482 (50%), Gaps = 56/482 (11%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V N L L G+S + LL +++ ++P + K+G +
Sbjct: 404 NYIEMARVTGVPLNYL---LTRGQSIKVMSQLLRKARQRNMLIP-----HHVKQGGGNVQ 455
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRM 670
A G AY G VL+ K G+Y+ I +DF SLYPSI+ +N+C++T+ V
Sbjct: 456 AEGG-----VAYEGATVLDAKAGYYEMPIATLDFASLYPSIMMAHNLCYSTLVPKDKVGK 510
Query: 671 LQDSDITTLCE---YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YD 725
L D T ++ +V GILP +++L+ +R++ KA +K+ ++D L + D
Sbjct: 511 LNPDDYGTSPSGDTFVKASKVK-GILPEILEELLGARKRAKADLKK---ATDPLQKAVLD 566
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NL 776
RQ ALK++ANS+YG G + +++ TA GR ++ +TK +VE
Sbjct: 567 GRQLALKVSANSVYGFTGAMVGQLPCLEISSSTTAYGRTMIDHTKKMVEEKYRTVNGYTG 626
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKK 835
N EVIYGDTDS+MI N D K+G + ++ + K ++L+ + VY LL+ KK
Sbjct: 627 NAEVIYGDTDSVMIKFNTPDLAESMKLGEEAAVYVSETFLKPIKLEFEKVYWPYLLISKK 686
Query: 836 KYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
+YA L + N KM + KG++ VRRD L + + V+ +IL ++
Sbjct: 687 RYAGLLWTNTENYDKM----DTKGIETVRRDNCLLVRQVIETVLEKILKQRD-------- 734
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+Q ++++ DL + + L ITK TK + Y + A H+++A R+ +
Sbjct: 735 -VQGAVKYVQSTIADLLMNRLDFSQLVITKGFTKEADSYGVKMA--HIELAQRMRQRDPA 791
Query: 955 KLK-QGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD I+Y+I + + A +++ + I L NN L ID +YL + + R+ E
Sbjct: 792 TAPVVGDRIAYVIIKAAKNAKAYEKSEDPIFALDNN--LPIDTKHYLDHYLTKPLLRIFE 849
Query: 1013 PI 1014
PI
Sbjct: 850 PI 851
>gi|340522830|gb|EGR53063.1| DNA polymerase delta, catalytic subunit [Trichoderma reesei QM6a]
Length = 1105
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 210/415 (50%), Gaps = 46/415 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DF SLYPSIIQ +N+C+TT+ ++ +D D +
Sbjct: 578 YEGATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLLRPGDVERFKLKKDEDYIV 637
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + G+L +++L+ +R+Q K + Q +D + + RQ ALK++
Sbjct: 638 TPNGDMFVTATKRKGLLAQILEELLSARKQAKRELAQ---ETDPFKKAVLNGRQLALKVS 694
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +A+ T+ GR+++ TK VE + +VIYGDT
Sbjct: 695 ANSVYGLTGATTGKLPCLAIASSTTSFGRQMIEKTKREVEEKYTIANGYTHDAQVIYGDT 754
Query: 786 DSLMISCNVNDYDSVFKIGNQI-KSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D K+G + K K K ++L+ + VY LL+ KK+YA L ++
Sbjct: 755 DSVMVKFGTKDLAEAMKLGEEASKYVSAKFLKPIKLEFEKVYFPYLLINKKRYAGLYWTR 814
Query: 845 LSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
KM + KG++ VRRD LA + V+ IL +D +Q +++
Sbjct: 815 TEKYDKM----DTKGLETVRRDNCLLAQTVIEKVLRMIL---------IDRDVQGAQDYV 861
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K DL + ++ L ITK LTK E+Y ++A HV++A R+ ++ GD +
Sbjct: 862 KSTIADLLQNKIDMSKLVITKALTK--EDYAAKQA--HVELAQRMKKRDAGSAPGLGDRV 917
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+Y++ +++ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 918 AYVMVRGAAGAKNFEKSEDPIYVLENN--VPIDTKYYLDNQLAKPLGRIFEPILG 970
>gi|341875870|gb|EGT31805.1| hypothetical protein CAEBREN_32455 [Caenorhabditis brenneri]
Length = 1017
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 222/432 (51%), Gaps = 61/432 (14%)
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRML 671
EAN G G Y G V++P +GFY++ I +DF SLYPSI+ +N+C+TT+ + +
Sbjct: 563 EANSGDGE---GYEGATVIDPIRGFYNEPIATLDFASLYPSIMIAHNLCYTTLLKAPQGI 619
Query: 672 QDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL-LMQYDIRQ 728
++ D T +Y G+LP ++ ++ +R++ K MK N + M Y+ RQ
Sbjct: 620 ENEDYIRTPSGQYFATKSKRRGLLPEILEDILAARKRAKNDMK--NEKDEFKRMVYNGRQ 677
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------ 776
ALK++ANS+YG G + ++ VTA GR+++ TKS VE +
Sbjct: 678 LALKISANSVYGFTGATVGKLPCLEISQSVTAFGRKMIDMTKSEVERIYKKGALDGKCPA 737
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKK 836
+ +VIYGDTDS+M+ V +IG L+ + VY LL+ KK+
Sbjct: 738 DAKVIYGDTDSVMVKFGVETVAQAMEIG-------------LDAAKEKVYSPYLLINKKR 784
Query: 837 YAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYSL 892
YA L +K + KM C KG++ VRRD L ++ + ++L D+QS D++
Sbjct: 785 YAGLYFTKPDVHDKMDC----KGLETVRRDNCPLVAKVLGVCLEKLLIDRDQQSALDFA- 839
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
K+ +DL + ++LL I+K+LTK+ ++Y ++A HV++A R+ +
Sbjct: 840 -----------KRTISDLLCNKIDISLLIISKELTKSGDKYQAKQA--HVELAARMKKRD 886
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ + GD + Y+ + A +RA + L+NN + +D +YL+ Q+ + R+
Sbjct: 887 AGSAPRLGDRVPYVFIAAAKNVPAYERAEDPTFVLQNN--IPLDTKHYLTNQLAKPLARI 944
Query: 1011 LEPIEGTDAVRI 1022
EPI G A +I
Sbjct: 945 FEPILGDRAEKI 956
>gi|118431730|ref|NP_148383.2| DNA polymerase II [Aeropyrum pernix K1]
gi|152031597|sp|O93746.3|DPOL2_AERPE RecName: Full=DNA polymerase 2; AltName: Full=DNA polymerase II
gi|116063052|dbj|BAA81109.2| family B DNA polymerase II [Aeropyrum pernix K1]
Length = 803
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 207/396 (52%), Gaps = 38/396 (9%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQDSDITT 678
R + Y+G +VL PK G ++ I ++DF S+YP+I+ +YN+ T+ P + ++ T
Sbjct: 416 RSEGRYAGAIVLRPKPGVHED-IAVLDFASMYPNIMVKYNVGPDTLVRPGEEYGEEEVYT 474
Query: 679 LCEYLPE-HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
E + + G +++ + RRQ+++ MK+ S D RQKA+KL AN+
Sbjct: 475 APEVGHKFRKSPPGFFKKILERFLSWRRQIRSEMKKHPPDSPEYKLLDERQKAIKLLANA 534
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
YG +G+P++R++ + A VTA GR I+ L EVIYGDTDSL + ND
Sbjct: 535 SYGYMGWPHARWYCRECAEAVTAWGRSIIRTAIRKAGELGLEVIYGDTDSLFVK---NDP 591
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQEI 856
+ V ++ ++ E ++ +D VY+ + + KK+Y L++ +GK+ ++
Sbjct: 592 EKVERLIRFVEEELG-----FDIKVDKVYRRVFFTEAKKRYVGLTV----DGKI----DV 638
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
G + VR DWS+LA E +F +++I+ + D ++ D ++NI E +++ + D+
Sbjct: 639 VGFEAVRGDWSELAKET-QFKVAEIVLKTGSVDEAV-DYVRNIIEKLRRGQVDMRK---- 692
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT 976
L I K LT+ P Y R+ PHV AL L K++ G I Y++ +
Sbjct: 693 ---LVIWKTLTRPPSMYEARQ--PHVTAAL-LMERAGIKVEPGAKIGYVVTKGSGPLYTR 746
Query: 977 QRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
+ Y + SK ++DV YY+ +Q+ P R+L+
Sbjct: 747 AKPYFM-----ASKEEVDVEYYVDKQVVPAALRILQ 777
>gi|410982334|ref|XP_003997512.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 1 [Felis
catus]
Length = 1111
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N ME R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 528 VLVNAMEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMREGLLMP-----VVKTEGV 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 AAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYML 830
+ +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYGTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPPPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 908 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 LRIFEPILG 975
>gi|410982336|ref|XP_003997513.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 2 [Felis
catus]
Length = 1109
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N ME R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 526 VLVNAMEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMREGLLMP-----VVKTEGV 576
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 623
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 624 AAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 680
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 681 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 740
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYML 830
+ +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 741 NGYGTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPPPIRLEFEKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 801 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 850
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 851 ---IDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERM 905
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID YYL QQ+ +
Sbjct: 906 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPL 964
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 965 LRIFEPILG 973
>gi|224002805|ref|XP_002291074.1| DNA polymerase [Thalassiosira pseudonana CCMP1335]
gi|220972850|gb|EED91181.1| DNA polymerase, partial [Thalassiosira pseudonana CCMP1335]
Length = 999
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 238/489 (48%), Gaps = 63/489 (12%)
Query: 549 KYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPD-KQYGKNKK 607
K V N +E R+T V +S + G+ + ++L + + V+P ++ G
Sbjct: 421 KLSVLINYVEMARVTGV---PVSFLISRGQQIKVFSMILRKCRDVNLVVPTLRKSGAGAD 477
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI- 666
EG Y G VL+P K +Y+ I +DF SLYPSI+Q YN+C++T+
Sbjct: 478 EG----------------YEGATVLDPIKSYYEVPIATLDFASLYPSIMQAYNLCYSTMV 521
Query: 667 ---------PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLS 717
P + + + T V GILP +++L+ +R++ K MK
Sbjct: 522 SQHEASKIDPSKYKRSENGHTFV----HSNVKKGILPIILEELLSARKRAKKDMKNAPND 577
Query: 718 SDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--- 774
+ +Q + RQ ALK++ANS+YG G + P+A+ VTA GR +L TK+ VE
Sbjct: 578 FEKSVQ-NGRQLALKVSANSVYGFTGAGVGQLPCVPIASSVTAYGRFLLEKTKAYVEEHY 636
Query: 775 ------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYK 827
N +V+YGDTDS+M+ F + + +C+ ++ + L+ + VY
Sbjct: 637 TVAHGYKHNAKVVYGDTDSVMVKFGTATVAETFPLAIEAAEKCSAIFPDPILLEFEKVYY 696
Query: 828 YMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY 887
LL+ KK+YA L +++ + + KG++ VRRD L E + +++I+ E++
Sbjct: 697 PYLLMNKKRYAGLMWTQVEKYDYM---DTKGLETVRRDNCALVREVIQTSLNKIIIERN- 752
Query: 888 TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR 947
+ +++K DL + ++ L ITK L E+Y ++A HV++A R
Sbjct: 753 --------VPGAIDYVKSQIADLLQNKMDISRLVITKSLGGKAEDYKVKQA--HVELAAR 802
Query: 948 LNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHP 1005
+ ++ Q GD + Y+I A ++A + I L+NN + ID +YLS Q+
Sbjct: 803 MRKRDAGSAPQMGDRVPYVIITAAKGAANFEKAEDPIYVLENN--IPIDCKWYLSNQLSK 860
Query: 1006 VVTRLLEPI 1014
+TR+ EPI
Sbjct: 861 PLTRIFEPI 869
>gi|238883420|gb|EEQ47058.1| DNA polymerase delta catalytic subunit [Candida albicans WO-1]
Length = 849
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 214/412 (51%), Gaps = 42/412 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT------IPVRMLQDSDITTL 679
Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT I L + D T
Sbjct: 327 YEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIKAFGLTEDDYTKT 386
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ + +L+ +R++ KA +K+ D+L + RQ ALK++A
Sbjct: 387 PNGDYFVHSNLRKGILPTILDELLTARKKAKADLKKETDPFKKDVL---NGRQLALKISA 443
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 444 NSVYGFTGATVGKLPCLAISSSVTAFGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTD 503
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + + +K ++L+ + VY LL+ KK+YA L ++
Sbjct: 504 SVMVKFGYQDLETCMKLGEEAANYVSTKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTR- 562
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+ + KG++ VRRD +L V+ IL+E+ + +K+
Sbjct: 563 --PEKFDKMDTKGIETVRRDNCRLVQNVITKVLEFILEERD---------VPKAQRFVKQ 611
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISY 964
DL + L+ L ITK +K +Y+ ++A HV++A R+ + GD ++Y
Sbjct: 612 TIADLLQNRIDLSQLVITKAYSK--HDYSAKQA--HVELAERMRKRDPGSAPTLGDRVAY 667
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+I + G + + + L+N+ L IDV YYL QQ+ + R+ PI G
Sbjct: 668 VIIKTGGDKNYEKSEDPLYVLENS--LPIDVKYYLDQQLTKPLERIFIPILG 717
>gi|324120768|dbj|BAJ78775.1| DNA polymerase delta catalytic subunit [Ctenocephalides felis]
Length = 1002
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 239/488 (48%), Gaps = 65/488 (13%)
Query: 555 NQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
N ME R+T V G +L+R G+ + LL E Y++P
Sbjct: 429 NYMEMARVTGVPLGCLLTR----GQQIKVVSQLLRKSKEAGYLMP--------------- 469
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRM- 670
G+G ++ Y G V+EP++G+Y + +DF SLYPSI+ +N+C+TT+ P +
Sbjct: 470 -TYSGQGSEEQ-YEGATVIEPRRGYYADPVSTLDFASLYPSIMMAHNLCYTTLIQPGQKE 527
Query: 671 ---LQDSDITTLCE--YLPEHQVDTGILPSEIKKLVESRRQVKALM---KQPNLSSDLLM 722
L D +T + V G+LP ++ L+ +R++ KA + K P S L
Sbjct: 528 KLGLTDDQVTRTPSNNLFVKSSVRKGLLPEILESLLSARKKAKADLRDEKDPFKRSVL-- 585
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----N 777
D RQ ALK++ANS+YG G R ++ VTA GR ++ TK VE
Sbjct: 586 --DGRQLALKISANSVYGFTGAQVGRLPCLEISGSVTAYGRTMIEQTKQEVERKYTIANG 643
Query: 778 YE----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLL 832
YE VIYGDTDS+M++ V + ++G + + K + ++L+ + VY LL+
Sbjct: 644 YESDAVVIYGDTDSVMVNFGVKSLERSMELGREAAEFVSQKFIRPIKLEFEKVYFPYLLI 703
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ I + KG++ VRRD S L + + +IL +
Sbjct: 704 NKKRYAGLYYTRTDKYDKI---DCKGIETVRRDNSPLVANMMNMCLQKILVHRD------ 754
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
+ E+ K++ +DL + ++ L ITK+L+K+ +Y ++A HV++A ++ +
Sbjct: 755 ---PEGAVEYAKQVISDLLCNKIDISQLVITKELSKS--DYAAKQA--HVELANKMKKRD 807
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ K GD + Y++C + A +A + + NS + ID YYL Q+ + R+
Sbjct: 808 AGTAPKLGDRVPYVLCAAAKNTPAYMKAEDPIYVLENS-IPIDSAYYLENQLSKPLLRIF 866
Query: 1012 EPIEGTDA 1019
EPI G A
Sbjct: 867 EPILGDKA 874
>gi|324120760|dbj|BAJ78771.1| DNA polymerase delta catalytic subunit [Lucidina biplagiata]
Length = 1045
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 238/494 (48%), Gaps = 71/494 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V ++ L G + LL + Y +P +Y + ++
Sbjct: 469 NDIEMARVTGVS---ITSLLTKGEQIKVVAQLLRHSQQSGYFMPTHRYAPSSEQ------ 519
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQD- 673
Y G V+EP +G+Y I +DF+SLYPSI+ +N+C+TT+ ++D
Sbjct: 520 -----------YEGATVIEPIRGYYTDPIATLDFSSLYPSIMIAHNLCYTTLLHSGMKDK 568
Query: 674 ----SDITTLC---EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
SD T+ + V G+LP +++L+ +R++ K +K D +M+ +
Sbjct: 569 LGLTSDEITVTPSQNMFVKSSVRPGLLPEILQQLLAARKRAKDALKD---EQDPVMRAVL 625
Query: 727 --RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
RQ ALK++ANS+YG G + ++ VTA GR ++ T+ VE
Sbjct: 626 NGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRSMIEQTRLEVERHYSVANGFE 685
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
+ +VIYGDTDS+M++ V + ++G + + K K ++L+ + VY LL+ K
Sbjct: 686 NDAKVIYGDTDSVMVNFQVKTLEQTMELGREAAGLISQKFVKPIKLEFEKVYFPYLLINK 745
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDY 890
K+YA L ++ KM C KG++ VRRD L + + ++L D Y
Sbjct: 746 KRYAGLYFTRTDKYDKMDC----KGIETVRRDNCTLVVDVINTCLQKLLIYRDPDGAIAY 801
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+ K+I +DL V ++ L ITK+LTKA +Y + A HV+++ ++
Sbjct: 802 A------------KRIISDLLQNNVDISQLVITKELTKA--DYATKVA--HVELSKKMTK 845
Query: 951 TNSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ K GD I Y+I + A Q+A + I L+NN + ID YYL Q+ +
Sbjct: 846 RDPGSAPKLGDRIPYVIIAAAKNTPAFQKAEDPIYVLENN--IPIDATYYLENQLSKPLV 903
Query: 1009 RLLEPIEGTDAVRI 1022
R+ +PI G +A I
Sbjct: 904 RIFQPILGDNAESI 917
>gi|324120700|dbj|BAJ78741.1| DNA polymerase delta catalytic subunit [Ephemera japonica]
Length = 1006
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 237/487 (48%), Gaps = 70/487 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL EK +V+P
Sbjct: 430 NYMEMARVTGVS---LLCLLTRGQQIKVISQLLRKAKEKDFVIPTYSV------------ 474
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
KG Y G V+EPKKG+Y + I+ +DF+SLYPSI+ +N+C+TT ++Q+
Sbjct: 475 ----KGSNDEQYEGATVIEPKKGYYKQPIVTLDFSSLYPSIMMAHNLCYTT----LVQNK 526
Query: 675 D----------ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ- 723
D IT + + + G+LP ++ L+ +R++ K +K+ D L Q
Sbjct: 527 DRLKLSSEQYTITPNGDCFVKTSIRKGLLPEILESLLSARKKAKEDLKK---EMDPLRQK 583
Query: 724 -YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---NL--- 776
D RQ ALK++ANS+YG G + ++ TA GR ++ +TK+ VE N+
Sbjct: 584 VLDGRQLALKISANSVYGFTGAQVGKLPCLAISGSTTAYGRTMIEHTKTEVEQKFNMANG 643
Query: 777 ---NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLL 832
+ VIYGDTDS+MI V D + +G + +K K ++L+ + VY LL+
Sbjct: 644 YAHDSVVIYGDTDSVMIKFGVEDLPAAMALGREAAEYVTSKFIKPIKLEFEKVYFPYLLI 703
Query: 833 KKKKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KK+YA L +K + KM C KG++ VRRD L + + +L D
Sbjct: 704 NKKRYAGLYYTKPETYDKMDC----KGIETVRRDNCPLVANMMNTCLRMLL-----IDRD 754
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
D +Q K + +DL + ++ L ITK+L K E+Y ++A HV++A ++
Sbjct: 755 PDGAVQ----FAKDMISDLLCNRLDISQLVITKELAK--EDYKAKQA--HVELAEKMKKR 806
Query: 952 NSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+ K GD + Y+I A Q++ + I L+NN + ID +YYL+ Q+ + R
Sbjct: 807 DPGTAPKLGDRVPYVIIAAPKKTPAYQKSEDPIYVLENN--VSIDTDYYLNNQLAKPLLR 864
Query: 1010 LLEPIEG 1016
+ PI G
Sbjct: 865 IFSPILG 871
>gi|380488089|emb|CCF37614.1| DNA polymerase delta catalytic subunit [Colletotrichum higginsianum]
Length = 1103
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 215/416 (51%), Gaps = 48/416 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD + +DF SLYPSI+Q +N+C+TT+ ++ +D D +
Sbjct: 576 YEGATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLVNKKAIEKFQLKKDEDYIV 635
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + ++ G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 636 TPNGDTFVTNKQRKGLLAQILEELLSARKQAKRELAVETDPFKKAVL----NGRQLALKI 691
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +A+ T+ GR++++ TK VE + + +VIYGD
Sbjct: 692 SANSVYGLTGATTGKLPCLEIASSTTSFGRQMIMKTKEEVEKKYCIANGYSHDAQVIYGD 751
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 752 TDSVMVKFGTKDLPEAMKLGEEAANHVSSKFVKPIKLEFEKVYYPYLLINKKRYAGLYWT 811
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D +Q ++
Sbjct: 812 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVQGAQDY 858
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K DL V ++ L ITK LTK ++Y ++A HV++A R+ ++ GD
Sbjct: 859 VKDTIADLLQNKVDMSKLVITKALTK--DDYAAKQA--HVELAQRMKKRDAGSAPGLGDR 914
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + +++ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 915 VAYVMIKGPAGSKNYEKSEDPIYVLENN--VPIDTRYYLDNQLAKPLGRIFEPILG 968
>gi|324120734|dbj|BAJ78758.1| DNA polymerase delta catalytic subunit [Gynaikothrips ficorum]
Length = 1091
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 240/492 (48%), Gaps = 67/492 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL EK +++P Q TG
Sbjct: 518 NYMEMARVTGV---TLASLLTRGQQIKVMSQLLRKAREKDFIMPTYQ---------STGG 565
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV-----R 669
++ Y G V+EPK+G+Y I +DF+SLYPSI+ +N+C+TT+ + R
Sbjct: 566 DDQ--------YEGATVIEPKRGYYADPISTLDFSSLYPSIMMAHNLCYTTLLLGNAKER 617
Query: 670 MLQDSD---ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ +D T + + V G+LP + L+ +R++ K+ +K D Q
Sbjct: 618 LGLSADQYSKTPANNFFVKPSVRKGLLPEILDDLLSARKKAKSDLKN---EKDPFKQRVL 674
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------N 775
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK+ VE
Sbjct: 675 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKTNVEEKYRIENGYK 734
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKK 834
+ VIYGDTDS+M+ V + ++G + +K K ++L+ + VY LL+ K
Sbjct: 735 HDAVVIYGDTDSVMVKFGVKTLEEAMELGREAAEFVTSKFIKPIKLEFEKVYFPYLLINK 794
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ KM C KG++ VRRD S L + + ++L D + D
Sbjct: 795 KRYAGLYFTRPDKYDKMDC----KGLETVRRDNSPLVANMMNTCLQKLL-----IDRNPD 845
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL---NN 950
D + + K + +DL + ++ L ITK+LTK+ +Y ++A HV++A ++ +
Sbjct: 846 DAV----AYAKSVISDLLCNRIDISQLVITKELTKS--DYAAKQA--HVELAAKMKKRDP 897
Query: 951 TNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
N+ KL GD + +++ A +A + + NS + ID +YYL Q+ + R+
Sbjct: 898 GNAPKL--GDRVPFVLISASKGTPAYMKAEDPIYVLENS-IPIDFSYYLENQLSKPLLRI 954
Query: 1011 LEPIEGTDAVRI 1022
PI G A I
Sbjct: 955 FTPILGDKAESI 966
>gi|296234423|ref|XP_002762441.1| PREDICTED: DNA polymerase delta catalytic subunit [Callithrix
jacchus]
Length = 1107
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 209/414 (50%), Gaps = 42/414 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSDI-T 677
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+ + + +D I T
Sbjct: 581 YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKT 640
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLTA 735
+ + V G+LP ++ L+ +R++ KA + + +D L + D RQ ALK++A
Sbjct: 641 PTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAR---ETDPLRRQVLDGRQLALKVSA 697
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDTD 786
NS+YG G + ++ VT GR+++ TK LVE + + +V+YGDTD
Sbjct: 698 NSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTD 757
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M V+ +G + + + + L+ + VY LL+ KK+YA L S
Sbjct: 758 SVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSR 817
Query: 846 SNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+ +M C KG++ VRRD L + + ++L +D + H
Sbjct: 818 PDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL---------IDRDPEGAVAHA 864
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
+ + +DL + ++ L ITK+LT+A +Y ++A HV++A R+ + GD +
Sbjct: 865 QDVISDLLCNRIDISQLVITKELTRAASDYAGKQA--HVELAERMRKRDPGSAPSLGDRV 922
Query: 963 SYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I AA ++ + + +S L ID YYL QQ+ + R+ EPI G
Sbjct: 923 PYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAKPLLRIFEPILG 975
>gi|169775879|ref|XP_001822406.1| DNA polymerase delta catalytic subunit [Aspergillus oryzae RIB40]
gi|238502533|ref|XP_002382500.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|83771141|dbj|BAE61273.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691310|gb|EED47658.1| DNA polymerase delta catalytic subunit Cdc2, putative [Aspergillus
flavus NRRL3357]
gi|391871049|gb|EIT80215.1| DNA polymerase delta, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1104
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 243/488 (49%), Gaps = 71/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+P+ N E E+
Sbjct: 528 NYTEMARVTGVPFNFLL-----SRGQQVKFMSQLFRKALEQQLVIPN-----NTPESEQ- 576
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP +G+Y+ I +DF SLYPSIIQ +N+C+TT+
Sbjct: 577 ------------EYEGATVIEPVRGYYNVPIATLDFASLYPSIIQAHNLCYTTLLNKKAV 624
Query: 667 ---PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
++ +D +T + +V G+L +++L+ +R++ K K+ + +D +
Sbjct: 625 ERYNLKKDEDYIVTPNGDLFCTTKVRKGLLSQILEELLAARKRAK---KELAVETDPFKK 681
Query: 724 YDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
+ RQ ALK++ANS+YG G + P+A+ T+ GR+++ TK VE
Sbjct: 682 AVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKQEVEARYTIAN 741
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLL 831
+ + +VIYGDTDS+M+ V + K+G + +K K ++L+ + VY LL
Sbjct: 742 GYSHDAKVIYGDTDSVMVKFGVTELADAMKLGQEASEYVSSKFLKPIKLEFEKVYFPYLL 801
Query: 832 LKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
+ KK+YA L +K KM + KG++ VRRD L + V+ +IL
Sbjct: 802 INKKRYAGLYWTKTEKYDKM----DTKGIETVRRDNCLLVQNVIETVLHKIL-------- 849
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + + E++K+ +DL V ++ L ITK L+K+ +Y ++A HV++A R+
Sbjct: 850 -IDRDVDSAQEYVKETISDLLQNKVDMSKLVITKALSKS--DYAAKQA--HVELAERMKK 904
Query: 951 TNSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I + G S+ + I L+NN + ID YYL Q+ +
Sbjct: 905 RDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLANPLG 962
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 963 RIFEPILG 970
>gi|324120690|dbj|BAJ78736.1| DNA polymerase delta catalytic subunit [Nipponatelura sp. 66-1]
Length = 1006
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 230/484 (47%), Gaps = 63/484 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL EK +V+P G +++
Sbjct: 430 NYMEMARVTGV---PLSCLLTRGQQIKVVSQLLRKAREKDFVIPTYSVGVQEEQ------ 480
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y G V+EPK+G+Y I +DF+SLYPSI+ +N+C+T++ ++D
Sbjct: 481 -----------YEGATVIEPKRGYYADPIATLDFSSLYPSIMMAHNLCYTSLLQGSVKDK 529
Query: 675 --------DITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
T + + V G+LP ++ L+ +R++ KA +K +D L +
Sbjct: 530 LGLTPDQYTKTPAGNFFVKTSVRKGLLPEILENLLAARKKAKADLKD---ETDPLRRKVL 586
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------NLNY 778
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE N Y
Sbjct: 587 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVERKYCIANGFY 646
Query: 779 E---VIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
VIYGDTDS+M+ V + +G + +K K ++L+ + VY LL+ K
Sbjct: 647 HDAVVIYGDTDSVMVKFGVKSLEKAMALGREAAEYVSSKFIKPIKLEFEKVYFPYLLINK 706
Query: 835 KKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L +K + KM C KG++ VRRD L + + ++L +D
Sbjct: 707 KRYAGLYFTKADTYDKMDC----KGLETVRRDNCPLVANMMNTCLQKLL---------ID 753
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
+ K++ DL + ++ L ITK+L K+ +Y R+A HV++A ++ +
Sbjct: 754 RDPDGAVSYAKQVIADLLCNRIDISQLVITKELAKS--DYAARQA--HVELANKMKKRDP 809
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
K GD + Y++ A +A + + NS + ID NYYL Q+ + R+
Sbjct: 810 GTAPKLGDRVPYVLISAAKGTPAYMKAEDPIYVLENS-IPIDSNYYLENQLSKPLLRIFS 868
Query: 1013 PIEG 1016
P+ G
Sbjct: 869 PVLG 872
>gi|332158501|ref|YP_004423780.1| DNA polymerase I [Pyrococcus sp. NA2]
gi|331033964|gb|AEC51776.1| DNA polymerase I [Pyrococcus sp. NA2]
Length = 775
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 204/398 (51%), Gaps = 46/398 (11%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TL 679
+Y GG V EP++G ++ I+ +DF SLYPSII +N+ T+ + D
Sbjct: 384 SYEGGYVKEPERGLWEG-IVSLDFRSLYPSIIITHNVSPDTLNKEGCGEYDEAPEVGHRF 442
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTANS 737
C+ P G +PS + L+E R+++K MK+ + LL D RQ+A+K+ ANS
Sbjct: 443 CKDFP------GFIPSLLGSLLEERQKIKKRMKESKDPVERKLL---DYRQRAIKILANS 493
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC-NVND 796
YG G+ +R++ + A VTA GR+ + + +E ++V+Y DTD L + +
Sbjct: 494 FYGYYGYAKARWYCKECAESVTAWGRQYIELVRRELEERGFKVLYIDTDGLYATIPGEKN 553
Query: 797 YDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQE 855
++ + + + + N KL LEL+ +G Y + KKKYA + GK++
Sbjct: 554 WEEIKRRALEFVNYINSKLPGILELEYEGFYTRGFFVTKKKYALID----EEGKIVT--- 606
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFV 915
+G+++VRRDWS++A E V+ IL + ++ + +K++ L N +
Sbjct: 607 -RGLEIVRRDWSEIAKETQAKVLEAILKHGN---------VEEAVKIVKEVTEKLSNYEI 656
Query: 916 PLTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSE 973
P+ L I +Q+T+ EY KA+ PHV VA RL K+K G I Y++ DG
Sbjct: 657 PVEKLVIYEQITRPLNEY---KAIGPHVAVAKRL-AAKGIKIKPGMVIGYVVLRGDG--- 709
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
++RA IEE + K K D YY+ Q+ P V R+L
Sbjct: 710 PISKRAIAIEEF-DGKKHKYDAEYYIENQVLPAVERIL 746
>gi|302850307|ref|XP_002956681.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f. nagariensis]
gi|300258042|gb|EFJ42283.1| hypothetical protein VOLCADRAFT_67281 [Volvox carteri f. nagariensis]
Length = 991
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 241/492 (48%), Gaps = 72/492 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V LS L G+S + LL K +V+P+ + TG
Sbjct: 409 NYIEMARVTGV---PLSYLLTRGQSIKVFSQLLRKAQVKDFVIPNIKV---------TGP 456
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT---------T 665
AN G G Y G VLEPK GFY++ + +DF SLYPSI+ +N+C+T T
Sbjct: 457 ANGGDG---VGYEGATVLEPKIGFYERPVATLDFASLYPSIMMAHNLCYTTLVPNDRLAT 513
Query: 666 IPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLM 722
+PV +D + ++ G+LP +++L+ +R++ K +K P + L
Sbjct: 514 VPV---EDRAQSPCGDWFVRGTRQRGLLPEILEELLAARKRAKNDLKAETDPFKRAVL-- 568
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-------- 774
D RQ ALK++ANS+YG G + ++A VT+ GRE+++ T++LV+
Sbjct: 569 --DGRQLALKVSANSVYGFTGATVGKMPCLAISASVTSYGREMIMKTRALVQEHYTRANG 626
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLL 832
+ EVIYGDTDS+M++ V+D ++G + +K + ++L+ + VY LL+
Sbjct: 627 YETDCEVIYGDTDSVMVNFKVSDVTRAMELGREAAGFVSKAFPPPVKLEFEKVYFPYLLM 686
Query: 833 KKKKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYS 891
KK+YA L ++ + KM + KG++ VRRD L + +IL
Sbjct: 687 NKKRYAGLLWTRPEKHDKM----DSKGIETVRRDNCLLVRNVVTTCLERIL--------- 733
Query: 892 LDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNT 951
+D + ++K + DL + L+LL I+K LTK +EY + A HV++A ++
Sbjct: 734 IDKDIAAAKAYVKGVIADLLMNKIDLSLLVISKGLTKDGDEYDTKIA--HVELAKKMRKR 791
Query: 952 NSKKLKQ-GDTISYIICEDGTS------EAATQRAYNIEELKNNSKLKIDVNYYLSQQIH 1004
++ GD + Y+I + G + E A Y +E L ID +YL +
Sbjct: 792 DAATAPAVGDRVPYVIIKAGAAKGAKAWEKAEDPIYALEH-----SLPIDCQHYLEHHLS 846
Query: 1005 PVVTRLLEPIEG 1016
+ R+ EP+ G
Sbjct: 847 QPLLRIFEPVMG 858
>gi|378755079|gb|EHY65106.1| hypothetical protein NERG_01552 [Nematocida sp. 1 ERTm2]
Length = 1020
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 201/426 (47%), Gaps = 62/426 (14%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLP 684
Y GG V+EP KGFY ++++D+ SLYPSII YN+C+TT+ + + + EY
Sbjct: 480 TYEGGYVMEPNKGFYSNPVVVLDYASLYPSIIMAYNMCYTTLLSK--EQASKMDKSEYTE 537
Query: 685 EHQVDT--------GILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKL 733
D GILP + L+E R+ V+A +K P L + L + RQ ALK+
Sbjct: 538 SPTGDCFLRKEKKPGILPVILTGLLEGRKAVRAELKNIKDPELKASL----NARQLALKV 593
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN------------------ 775
+ANS+YG G + P++ VT GREIL TK LVEN
Sbjct: 594 SANSVYGFTGAARTGLPCIPISRSVTGFGREILKKTKELVENEYNKGEKTEGSDEQENNN 653
Query: 776 ---------LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQI-KSECNKLYKQLELDIDGV 825
N V YGDTDS+M++ + F++G++I K +L L L+ + V
Sbjct: 654 SQKEGNRRTWNLFVAYGDTDSVMVTQPGLTLEQAFQVGDEISKFVSTRLPNPLTLEFEKV 713
Query: 826 YKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ 885
Y +L+ KK+YA + + S+ I + KG++ VRRD L + K I+++
Sbjct: 714 YHPFVLINKKRYAGCTKTSPSDKGRI---DTKGIETVRRDNCLLVRDLMKECINKVF--- 767
Query: 886 SYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVA 945
L+ ++ +K +L + + ++ L ITK +TK +Y +L HV +A
Sbjct: 768 ------LEGDVEGTRALIKDRVKELLSNRIGISQLIITKSITKQGGDYA--VSLAHVALA 819
Query: 946 LRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHP 1005
R+ GD +SY+I G + + L NN L ID YYL QI
Sbjct: 820 ERMKKREGTGPGLGDRVSYVII-TGKGPLHERSEDPVYALNNN--LPIDTLYYLKNQITK 876
Query: 1006 VVTRLL 1011
+ RLL
Sbjct: 877 PLERLL 882
>gi|429852563|gb|ELA27695.1| DNA polymerase delta catalytic subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 1102
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 213/420 (50%), Gaps = 56/420 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT+ +++D D +
Sbjct: 577 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVNKKAIEKFSLVKDEDYIV 636
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 637 TPNGDTFVTVKKRKGLLAQILEELLAARKQAKRELAVETDPFKKAVL----NGRQLALKI 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +A+ T+ GR++++ TK VE + + +VIYGD
Sbjct: 693 SANSVYGLTGATTGKLPCLEIASSTTSFGRQMIMKTKEEVEKKYCIANGYSHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 753 TDSVMVKFGTKDLPEAMKLGEEAAGFVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWT 812
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D +Q ++
Sbjct: 813 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVQGAQDY 859
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K DL V ++ L ITK LTK ++Y ++A HV++A R+ ++ GD
Sbjct: 860 VKDTIADLLQNKVDMSKLVITKALTK--DDYAAKQA--HVELAQRMKKRDAGSAPGLGDR 915
Query: 962 ISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + AA + Y E L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 916 VAYVMVKG----AAGSKNYENSEDPIYVLENN--VPIDTKYYLDNQLAKPLGRIFEPILG 969
>gi|325090528|gb|EGC43838.1| DNA polymerase subunit delta large [Ajellomyces capsulatus H88]
Length = 1111
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 168/629 (26%), Positives = 293/629 (46%), Gaps = 100/629 (15%)
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK--YAFNLPGVP--DLS 484
YLL R+EHLK S +S I ++ F S++I + + N+ G DL
Sbjct: 408 YLLKRAEHLK----CSGFHFWSRLKHIPSRVGDARFSSKQIGNRESKSTNISGRIQLDLL 463
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK---- 540
+ ++ Y + L S + G + + + ++ G P++ +
Sbjct: 464 QLVQRDYQLRSYTLNS-----VCAQFLGEQKEDVHHTMITELFNGT-----PDSRRRLAV 513
Query: 541 -------FPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFH 591
P R+ K N E R+T V N L R ++ +F+ L
Sbjct: 514 YCLKDAYLPQRL-MDKLMCLVNYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKAL 567
Query: 592 EKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
E+ V+P+ +N+ E+ Y G V+EP + FYD I +DF SL
Sbjct: 568 EQQLVIPNL---RNESTSEQ--------------YEGATVIEPIRDFYDVPIATLDFASL 610
Query: 652 YPSIIQEYNICFTTI---------PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVE 702
YPSIIQ +N+C+TT+ ++ +D +T + +V G+L +++L+
Sbjct: 611 YPSIIQAHNLCYTTLLKKSTIDAHQMKEGEDYIVTPNGDRFCTSKVRKGLLTQILEELLG 670
Query: 703 SRRQVKALMKQPNLSSDLLMQYDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTA 760
+R++ K K+ + +D + + RQ ALK++ANS+YG G + P+A+ T+
Sbjct: 671 ARKRAK---KELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTTS 727
Query: 761 KGREILLNTKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC 811
GR+++ TK VE + + +V+YGDTDS+M+ + D K+G +
Sbjct: 728 YGRQMIEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMVKFGMKDLAEAMKLGQEAADYV 787
Query: 812 -NKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQL 869
+K ++L+ + VY LL+ KK+YA L ++ N KM + KG++ VRRD ++
Sbjct: 788 SSKFINPIKLEFEKVYFPYLLINKKRYAGLYWTRPDNYDKM----DTKGIETVRRDNCRM 843
Query: 870 ASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKA 929
+ V+ +IL +D + ++K +DL + ++ L ITK L+K
Sbjct: 844 VQTVIETVLRKIL---------IDRDVDGAQSYVKDTISDLLQNKIDMSKLVITKALSK- 893
Query: 930 PEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKN 987
++YT ++A HV++A R+ ++ GD ++Y+I + G S+ + I L+N
Sbjct: 894 -KDYTAKQA--HVELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLEN 950
Query: 988 NSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
N + ID YYL Q+ +TR+ EPI G
Sbjct: 951 N--IPIDTKYYLDNQLAKPLTRIFEPILG 977
>gi|164655413|ref|XP_001728836.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
gi|159102722|gb|EDP41622.1| hypothetical protein MGL_4003 [Malassezia globosa CBS 7966]
Length = 970
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 247/489 (50%), Gaps = 66/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+ + L E Y++P
Sbjct: 398 NYTEMARVTGVPFNYL---LSRGQQIKVISQLFRKAREDGYLIP---------------- 438
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP------- 667
A KG+G + Y G VL+PK+G+YDK + +DF SLYPSI+ +N+C+TT+
Sbjct: 439 AYKGEGGDEQ-YEGATVLDPKQGYYDKPVATLDFASLYPSIMMAHNLCYTTLVDKHTIDR 497
Query: 668 VRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+++++D D +T Y V G+LP ++ L+ +R+ K+ +K +D L +
Sbjct: 498 LKLVEDKDYVVTPNNNYFVCKTVRKGLLPDVLEALLAARKAAKSDLKN---ETDPLRRAV 554
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NY 778
D RQ ALK++ANS+YG G R ++ VTA GR+++ TK VE Y
Sbjct: 555 LDGRQLALKVSANSVYGFTGATVGRLPCLEISMSVTAYGRQMIEETKRQVEKHYTVKNGY 614
Query: 779 E----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLK 833
E VIYGDTDS+M+ V++ + ++G + +K + K + L+ + +Y LL+
Sbjct: 615 EHDAVVIYGDTDSVMVKFGVSELEKAMQLGAEAAEFVSKSFVKPIRLEFEKIYFPYLLIN 674
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ + KM + KG++ VRRD +L + + ++L +
Sbjct: 675 KKRYAGLYWTRPEHYDKM----DTKGIETVRRDNCRLVRTVIETCLRKML---------I 721
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D ++ ++ K++ +DL + ++ L I+K L KA +Y ++A HV++A R+ +
Sbjct: 722 DRDVRGAEDYTKQVISDLLQNKIDMSQLVISKALAKA--DYAAKQA--HVELAERMRKRD 777
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
GD ++Y+I + AA +++ + + L++N + ID YYL Q+ + R+
Sbjct: 778 PGSAPALGDRVAYVIVKGSKGSAAYEKSEDPLYALEHN--IPIDTRYYLDNQLSKPLLRI 835
Query: 1011 LEPIEGTDA 1019
EPI G A
Sbjct: 836 FEPILGARA 844
>gi|448536009|ref|XP_003871049.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis Co
90-125]
gi|380355405|emb|CCG24924.1| Pol3 large subunit of DNA polymerase III [Candida orthopsilosis]
Length = 1147
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 217/413 (52%), Gaps = 44/413 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRM--LQDSDITTL 679
Y G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT+ +R L ++D T
Sbjct: 625 YEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKNSIRAFGLTEADYTKT 684
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y GILP+ + +L+ +R++ K +K D+L + RQ ALK++A
Sbjct: 685 PNGDYFVHPDKKKGILPTILNELLTARKKAKTDLKNEKDPFKKDVL---NGRQLALKISA 741
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + +VIYGDTD
Sbjct: 742 NSVYGFTGATIGKLPCLAISSSVTAFGREMIEKTKNEVQEYYSKKNGHPYDAKVIYGDTD 801
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D D+ K+G + + + K ++L+ + VY LL+ KK+YA L ++
Sbjct: 802 SVMVKFGYQDLDTCMKLGEEAANYVSTKFQNPIKLEFEKVYFPYLLINKKRYAGLYWTRP 861
Query: 846 SN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
KM + KG++ VRRD +L V+ IL+E++ D+ Q +K
Sbjct: 862 DKFDKM----DTKGIETVRRDNCRLVQNVITKVLEFILEERNV------DKAQRF---VK 908
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL V L+ L ITK +K +Y+ ++A HV++A R+ + GD ++
Sbjct: 909 QTIADLLQNRVDLSQLVITKAYSK--HDYSAKQA--HVELAERMRKRDPGSAPTLGDRVA 964
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I + G + + + L+N+ L IDV YYL QQ+ + R+ PI G
Sbjct: 965 YVIIKTGGDKNYEKSEDPLYVLENS--LPIDVKYYLEQQMTKPLERIFIPILG 1015
>gi|2581902|gb|AAC47778.1| DNA polymerase alpha [Leishmania mexicana]
Length = 308
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 121/186 (65%), Gaps = 13/186 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ K G + E GK
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQDFKRGRDDDEEEDGK- 184
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
+KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 185 -RKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRSEIDVPPPE 243
Query: 677 TTLC-----EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C E L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 244 NLICASCAAEGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDANNLAL-LEIRQKAL 302
Query: 732 KLTANS 737
KLTANS
Sbjct: 303 KLTANS 308
>gi|2581876|gb|AAC47765.1| DNA polymerase alpha [Leishmania amazonensis]
Length = 307
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 121/186 (65%), Gaps = 14/186 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ K G + E + G
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQDFKRGRDDDEED---G 182
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 183 KRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRSEIDVPPPE 242
Query: 677 TTLCEYLPEHQVDT-----GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C + T +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 243 NLICASCAAEGLSTPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDANNLAL-LEIRQKAL 301
Query: 732 KLTANS 737
KLTANS
Sbjct: 302 KLTANS 307
>gi|348666766|gb|EGZ06593.1| hypothetical protein PHYSODRAFT_532354 [Phytophthora sojae]
Length = 1050
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 214/428 (50%), Gaps = 57/428 (13%)
Query: 624 AAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC--- 680
A Y G V+EPKK FY I +DF SLYPSI+Q +N+C++T ++ D+ L
Sbjct: 524 AGYEGATVIEPKKAFYSVPIATLDFASLYPSIMQAFNLCYST----LVAPGDVDKLAPGD 579
Query: 681 -EYLPEHQV------DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY--DIRQKAL 731
E P + GILP +++++ +R+Q K M N ++D + + + RQ AL
Sbjct: 580 YERSPSGDIFVTSKKKKGILPLILEEVLAARKQAKWDM---NAATDPMEKAVQNGRQLAL 636
Query: 732 KLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIY 782
K++ANS+YG G + P+A+ TA GR++L T+ VE + + +V+Y
Sbjct: 637 KVSANSVYGFTGAIVGQMPCIPIASSTTAYGRQLLFRTREEVERIYTIANGYKADAQVVY 696
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+MI V+ + + + + ++ ++L+ + VY LL+ KK+YA L
Sbjct: 697 GDTDSVMIKFGVDTVEEAMPLAEEAAKRVSDIFPNPIKLEFEKVYFPYLLMNKKRYAGLL 756
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ------SYTDYSLDDR 895
+K + S KG++ VRRD L + V+ +IL + SYT + D
Sbjct: 757 WTKPEKYDKLDS---KGLETVRRDNCLLVRRMVESVLRKILINRDVPGAISYTKNVISDL 813
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
LQN R D ++LL ITK L K ++ + H ++A R+ +
Sbjct: 814 LQN--------RID-------ISLLVITKGLKKTVDQDDYKVKQAHTELAERMRKRDPGS 858
Query: 956 LKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
G+ I+Y+I + G + +A + + L+NN + ID +YY+ QQ+ + R+ EP
Sbjct: 859 APALGERIAYVIIDKGKATPLYDKAEDPVYALENN--IPIDCDYYMKQQLQNPLERIFEP 916
Query: 1014 IEGTDAVR 1021
I G V+
Sbjct: 917 IIGLSKVK 924
>gi|171693865|ref|XP_001911857.1| hypothetical protein [Podospora anserina S mat+]
gi|170946881|emb|CAP73685.1| unnamed protein product [Podospora anserina S mat+]
Length = 1108
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 238/489 (48%), Gaps = 72/489 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +FL L E+ V+P+ + E+
Sbjct: 530 NYTEMARVTGVPFNFLL-----ARGQQVKFLSQLFRKALEQKLVIPNMR--------SES 576
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR--- 669
E Y G V+EP +G+YD I +DF SLYPSIIQ +N+C+TT+ +
Sbjct: 577 SEEQ---------YEGATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLIKKKDI 627
Query: 670 ----MLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+++D D +T + + G+L +++L+ +R++ K A P + L
Sbjct: 628 ERWSLVKDEDYIVTPNGDMFVTTKKRKGLLAQILEELLSARKEAKRELAAETDPFKKAVL 687
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G N + +A+ TA GR+++ TK VE
Sbjct: 688 ----NGRQLALKISANSVYGLTGATNGKLPCLEIASSTTAFGRQMIERTKHEVEERYCIK 743
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYML 830
+ + +VIYGDTDS+M+ + K+G + +K K ++L+ + VY L
Sbjct: 744 NGYSHDAQVIYGDTDSVMVKFGTKELAEAMKLGEDAANYVSSKFIKPIKLEFEKVYFPYL 803
Query: 831 LLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
L+ KK+YA L +K KM + KG++ VRRD L + V+ IL
Sbjct: 804 LINKKRYAGLYWTKPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL------- 852
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D + E++K DL V ++ L ITK LTK ++Y ++A HV++A R+
Sbjct: 853 --IDRDVPGAQEYVKDTIADLLQNRVDMSKLVITKALTK--DDYAAKQA--HVELAHRMK 906
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVV 1007
++ GD ++Y++ + T +R+ + I L++N + ID YYL Q+ +
Sbjct: 907 KRDAGSAPALGDRVAYVMVKGATGSKNFERSEDPIYVLEHN--VPIDTKYYLDNQLAKPL 964
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 965 GRIFEPILG 973
>gi|290985690|ref|XP_002675558.1| predicted protein [Naegleria gruberi]
gi|284089155|gb|EFC42814.1| predicted protein [Naegleria gruberi]
Length = 1019
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 238/478 (49%), Gaps = 51/478 (10%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I + V G +S L G+ + LL ++ Y++P K+ +E GE ++
Sbjct: 435 IEMARVTGIPVSFILKRGQQIKVISQLLRKAKKEEYLMPTISKSGKKESLDEEGETSE-- 492
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
Y GG VL PK G+YD I +DF SLYPSI+ +N+C+TT +L+ D+ L
Sbjct: 493 ----ETYEGGFVLSPKTGYYDIPITTLDFASLYPSIMIAHNLCYTT----LLKKEDLAKL 544
Query: 680 CE----------YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIR 727
E Y + +V G+LP +++L+++R+Q K M + ++D L + + R
Sbjct: 545 SEDQYVKTPSGDYFIKREVQQGLLPLVLEELLQARKQAKKDMDK---ATDPLEKAVMNGR 601
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNY 778
Q ALK++ANS+YG G ++ VT+ GRE++ +TK +VE N
Sbjct: 602 QLALKISANSVYGFTGAQVGMLPCLEISQSVTSFGREMIQHTKEMVEENYTIKNGYETNA 661
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKY 837
VIYGDTDS+M+ D ++G E +K + K ++L+ + VY LLL KK+Y
Sbjct: 662 VVIYGDTDSVMVKFGTKDIRKAMELGLHASQEISKTFVKPIKLEFEKVYYPYLLLSKKRY 721
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
A L +K + + KG+ VRRD L + IL ++S ++
Sbjct: 722 AGLLWTK---PEKFDKMDAKGIVTVRRDNCALVRNLVNTCLHLILIKRS---------IE 769
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS-KKL 956
+ + K + +DL + +++L ITK L K ++Y +++ HV++A R++ +
Sbjct: 770 SAVNYAKSVISDLLMNRMDISMLVITKALVKKSDKYKAKQS--HVELAERMSKRDPLTAP 827
Query: 957 KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
+ GD I Y+I + A +++ + + NS + ID YYL QI + ++ +PI
Sbjct: 828 RVGDRIPYVIVKAHKGAKAYEKSEDPIWVLENS-IPIDAQYYLEHQIKKPLEQIFQPI 884
>gi|284161393|ref|YP_003400016.1| DNA polymerase Pol2 [Archaeoglobus profundus DSM 5631]
gi|284011390|gb|ADB57343.1| DNA polymerase Pol2 [Archaeoglobus profundus DSM 5631]
Length = 783
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 213/420 (50%), Gaps = 62/420 (14%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLP 684
+Y G VLEP +G ++ + +DF S+YPSI+ +NI T+ +D C P
Sbjct: 387 SYEGAFVLEPARGLHEN-VACLDFASMYPSIMINFNISPDTLVKGECED------CYVAP 439
Query: 685 E-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
E + G +K L+E RR++K MK+ + S+ DI+Q+ LK+ NS Y
Sbjct: 440 EVGHKFRKSPDGFFKRILKMLIEKRREMKRQMKELDPDSEDYKLLDIKQQTLKVLTNSFY 499
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCN-VNDYD 798
G G+ +R++ + A TA GR + + E++ +EV+YGDTDSL I N +N D
Sbjct: 500 GYTGWNLARWYCRECAEATTAWGRYFIKRAVKIAESMGFEVLYGDTDSLFIKKNKLNLKD 559
Query: 799 SVFKIGNQIKSECNKLYK------QLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMIC 852
++ EC KL ++L+ID YK + ++KK+YA L+ + +++
Sbjct: 560 --------LEKECLKLIDVISKELPIQLEIDEFYKAIFFVEKKRYAGLT----DDDRIV- 606
Query: 853 SQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDN 912
+KG++V R DW +LA + VI IL E++ D +L ++N+ E +K+ + L++
Sbjct: 607 ---VKGLEVRRGDWCELAKRVQREVIEIILRERN-PDKAL-KFVKNVIEEIKEGKFKLED 661
Query: 913 GFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTS 972
I K LTK P++Y ++A HV+ ALR G + ++I + G S
Sbjct: 662 -------YVIYKGLTKKPDKYESKQA--HVKAALRAMEMGI-YYPIGTKVGFVIVKGGGS 711
Query: 973 EAATQRAYNIEELK----NNSKL---------KIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+ RAY IE ++ N K+ KID +YY+ QI P V R+LE T+A
Sbjct: 712 --ISDRAYPIELIEEFDGENLKIRTPSGIMVKKIDKDYYIDHQIIPAVMRILERFGYTEA 769
>gi|295661753|ref|XP_002791431.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279988|gb|EEH35554.1| DNA polymerase delta catalytic subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1110
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 171/621 (27%), Positives = 297/621 (47%), Gaps = 84/621 (13%)
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK--YAFNLPGVP--DLS 484
YL+ R+EHLK +E +S Q+A++ F S++I + + N+ G DL
Sbjct: 407 YLIKRAEHLKCRE----FPFWSRLTQVASRVGDARFSSKQIGNRESKSTNISGRIQLDLL 462
Query: 485 EYLEVRYSAKCPALPS---DLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEKF 541
+ ++ + + L S G+ V T + L N + + + + +
Sbjct: 463 QLVQRDHQLRSYTLNSVCAQFLGEQKEDVHHTMITELFNGTADSRRRLAVYC--LKDAYL 520
Query: 542 PSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPD 599
P R+ K N E R+T V N L R ++ +F+ L E+ V+P+
Sbjct: 521 PQRL-MDKLMCLVNYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKALEQQLVIPN 574
Query: 600 KQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEY 659
+N+ E+ Y G V+EP + +YD I +DF SLYPSIIQ +
Sbjct: 575 L---RNEATSEQ--------------YEGATVIEPLRAYYDVPIATLDFASLYPSIIQAH 617
Query: 660 NICFTTI---------PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKAL 710
N+C+TT+ ++ +D +T + +V G+L +++L+ +R++ K
Sbjct: 618 NLCYTTLLKKSTIEAHGMKEGEDYIVTPNGDRFCTAKVRKGLLTQILEELLGARKRAK-- 675
Query: 711 MKQPNLSSDLLMQYDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
K+ + +D + + RQ ALK++ANS+YG G + P+A+ T+ GR+++
Sbjct: 676 -KELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEK 734
Query: 769 TKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQL 818
TK VE + + +V+YGDTDS+M+ D K+G + +K + +
Sbjct: 735 TKEEVEAKYTIANGYSNDAQVVYGDTDSVMVKFGTKDLAEAMKLGQEAADYVSDKFIRPI 794
Query: 819 ELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFV 877
+L+ + VY LL+ KK+YA L +K KM + KG++ VRRD ++ + V
Sbjct: 795 KLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKM----DTKGIETVRRDNCRMVQTVIETV 850
Query: 878 ISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRK 937
+ +IL E+ D QN ++K +DL + ++ L ITK L+K ++YT ++
Sbjct: 851 LKKILIERDV------DGAQN---YVKNTISDLLQNKIDMSKLVITKALSK--KDYTAKQ 899
Query: 938 ALPHVQVALRLNNTNSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKNNSKLKIDV 995
A HV++A R+ ++ GD ++Y+I + G S+ + I L+NN + ID
Sbjct: 900 A--HVELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENN--IPIDT 955
Query: 996 NYYLSQQIHPVVTRLLEPIEG 1016
YYL Q+ +TR+ EPI G
Sbjct: 956 KYYLDNQLAKPLTRIFEPILG 976
>gi|403343190|gb|EJY70918.1| DNA polymerase [Oxytricha trifallax]
Length = 1071
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 222/425 (52%), Gaps = 56/425 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPV-----RMLQDSDITTL 679
Y G +V+EP +GFY + +DF SLYPSI+ +N+C+++ IP L++ T
Sbjct: 537 YEGAVVIEPTRGFYTDPVATLDFASLYPSIMMAHNLCYSSLIPAHEIGKHPLENYIKTPN 596
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLTANS 737
+Y + V G+LP +++L+ +R++ + + + ++D + D RQ ALK++ANS
Sbjct: 597 GDYFMKQSVKKGLLPMILEELLAARKRARQELAK---TTDPFQKAVLDGRQLALKISANS 653
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV------EN---LNYEVIYGDTDSL 788
+YG G + +++ VT+ GRE++ T++ V EN + +VIYGDTDS+
Sbjct: 654 VYGFTGAQVGQLPCLAISSSVTSYGREMIEATRAYVLQKYNKENGYEFDSQVIYGDTDSV 713
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKLSN 847
M+ V K+G + + + ++Q ++L+ + VY LL+ KK+YA L +K
Sbjct: 714 MVKFGVKSIQEAMKLGQEAANYVTQFFQQPIKLEFEKVYCPYLLMNKKRYAGLLWTKPEK 773
Query: 848 -GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
KM C KG++ VRRD + EA + ++ +L EQ + +LD + K I
Sbjct: 774 FDKMDC----KGIETVRRDNCGIVKEAVQSALNMLLIEQD-AEKALD--------YCKGI 820
Query: 907 RTDLDNGFVPLTLLEITKQL---TKAPE------------EYTDRKALPHVQVALRLNNT 951
+DL + L+LL ITK L T PE +Y ++A HV++A R+
Sbjct: 821 VSDLLQNRIDLSLLVITKGLGKKTAKPETDANKPQGSANGQYHGKQA--HVELAERMRKR 878
Query: 952 N-SKKLKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
+ + QGD ++Y++ + +++ + + L++N L ID +YL QI + R
Sbjct: 879 DEASAPSQGDRVAYVMVKGAKGSKGYEKSEDPLYVLQHN--LPIDFQFYLDHQIKLPLLR 936
Query: 1010 LLEPI 1014
L EPI
Sbjct: 937 LFEPI 941
>gi|20089769|ref|NP_615844.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
gi|19914708|gb|AAM04324.1| DNA-directed DNA polymerase [Methanosarcina acetivorans C2A]
Length = 937
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 233/495 (47%), Gaps = 73/495 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYV-LPDKQYGKNKKEGEETGEANKG 618
I + V G++L + GG++ E LLL F K V LP K G+E
Sbjct: 405 IALAQVSGSLLQEIVDGGQTSMVETLLLREFGLKDRVILP--------KPGDELSAE--- 453
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT- 677
+ + GG VLEPKKG + +IL D+ SLYP+I+ +N+C+TT+ R D
Sbjct: 454 RYDMSSDLKGGEVLEPKKGLLENVLIL-DYKSLYPTIMMAHNLCYTTVVTRDRPDGKTIK 512
Query: 678 --TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+ E++P +V GI+PS ++ L+ R K MK+ + ++ + D Q A+K+
Sbjct: 513 PPSGGEFVPP-EVFRGIVPSILEDLLNKRGDTKKRMKRTSDENEHRV-LDATQLAIKILL 570
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------------------- 775
NS YG G+ +R ++ LA VT+ GR +LNT+ L+
Sbjct: 571 NSFYGYSGYARARLYSLTLANAVTSFGRSNILNTRDLINGRIGKIVLRNSAALLLEEAGK 630
Query: 776 -------LNYEVIYGDTDSLMISCNVN---DYDSVFKIGNQIKSECN-KLYKQLELDIDG 824
+ V YGDTDS+ + C + V +GN++ + L +EL+ +
Sbjct: 631 LSPQDRIVELSVAYGDTDSVFVHCKAKGDLSLEEVSLVGNRLSEIVSASLPDPMELEFES 690
Query: 825 VYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDE 884
V K LL+ KK+Y AL + + N ++KG++ VRRDW +L S V+ +L E
Sbjct: 691 VAKRALLIAKKRY-ALWLFEPRNSGWENKIKVKGMETVRRDWCELTSITLNRVLEFVLIE 749
Query: 885 QSYTDYSLDDRLQNIHEHMKKIRTDL-------DNGFVPLTLLEITKQLTKAPEEYTDRK 937
+ EH++K+ +D+ D G + L +T+ LT+ + Y +++
Sbjct: 750 GD---------VDKAVEHVRKVVSDVRNLDPGKDAGII--EKLVLTRTLTRKADSYKNKQ 798
Query: 938 ALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNY 997
PH+ VA L G I ++I RA + + ++ N+ + IDV+Y
Sbjct: 799 --PHLTVAENLKKRTGIMPSIGTRIPFVIT--AGKGLFVDRAEDPDYVRENN-VPIDVDY 853
Query: 998 YLSQQIHPVVTRLLE 1012
Y+ +QI P V R+LE
Sbjct: 854 YVKKQILPPVERILE 868
>gi|190344317|gb|EDK35969.2| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC 6260]
Length = 1075
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 216/413 (52%), Gaps = 44/413 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR--------MLQDSDIT 677
Y G V+EP +G+YD I +DF+SLYPSI+ +N+C+TT+ + D +T
Sbjct: 555 YEGATVIEPVRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLSKNSIAAFNLSKDDYTLT 614
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ + +L+ +R++ K +K D+L + RQ ALK++A
Sbjct: 615 PNGDYFVKEHKRKGILPTILHELISARKKAKVDLKNETDPFRKDVL---NGRQLALKISA 671
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDTD 786
NS+YG G + +++ VTA GR ++ TK+ V+ + + +VIYGDTD
Sbjct: 672 NSVYGFTGATIGKLPCLAISSSVTAFGRVMIEETKNEVQSRYTTENGYDYDAQVIYGDTD 731
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + ++ +K ++L+ + VY LL+ KK+YA L ++
Sbjct: 732 SVMVKFGHQDIETCMKLGEEAANYVSQKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTR- 790
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR-LQNIHEHMK 904
+ + KG++ VRRD +L VI+++L +Y L++R + +K
Sbjct: 791 --PEKFDKMDTKGIETVRRDNCRLVQN----VITKVL------EYILEERNVDKAERFVK 838
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL V L+ L ITK +K EY ++A H+++A R+ + GD ++
Sbjct: 839 QTIADLLQNRVDLSQLVITKAYSK--HEYAAKQA--HIELAERMKKRDPGSAPTLGDRVA 894
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I +++ + + L+N+ L IDV YYL Q+ + R+ EPI G
Sbjct: 895 YVIINSSSTKNYEKSEDPLFVLENS--LPIDVKYYLENQLANPLMRIFEPILG 945
>gi|435850447|ref|YP_007312033.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433661077|gb|AGB48503.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 903
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 241/509 (47%), Gaps = 82/509 (16%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQ-----YGKNKKEGEETGE 614
I I+ V G++L + GG++ E LLL + V+P K Y +NK
Sbjct: 384 IAISRVSGSLLQEVIDGGQTSMVENLLLRECRIRDRVIPPKPDDNLVYSRNKNS------ 437
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+G K GG VLEPKKG + +IL D+ SLYP+I+ +N+C++T+ +
Sbjct: 438 ----EGLK-----GGEVLEPKKGLLENVVIL-DYKSLYPTIMMAHNLCYSTV-----VEK 482
Query: 675 DITTLCEYLP--------EHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI 726
DI E + V GI+P+ ++ L+ R + K MK + + D D
Sbjct: 483 DIPGEGETITPPSGGRFVTADVSKGIMPAILENLLNRRIETKKRMKDIS-NEDEYKALDA 541
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------------ 774
Q A+K+ NS YG G+ +R ++ LA VT+ GRE +L T+SL+E
Sbjct: 542 TQLAMKILLNSFYGYAGYTRARLYSLTLANAVTSFGRENILTTRSLIEDTIHTIYLKDGN 601
Query: 775 --------------NLNYEVIYGDTDSLMISC------NVNDYDSVFKIGNQIKSECNKL 814
+++ V+YGDTDS+ + C ++ D + V K + I S L
Sbjct: 602 SYLQSEIASDPLNKDISLSVVYGDTDSVFVQCTGKTEISLEDAELVGKKISGIVSAS--L 659
Query: 815 YKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAG 874
+EL+ + + K L + KK+YA + +G ++KG++ VRRDW +L S+
Sbjct: 660 PDPMELEFESIAKRALFIAKKRYAIWVFERFGDGWK-DGIKVKGMETVRRDWCELTSKTL 718
Query: 875 KFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT-DLDNGFVPLTLLEITKQLTKAPEEY 933
V+ +L ++ +Q++ + + IR D+ + L +T+ +K E Y
Sbjct: 719 NRVLELVLKAG-----EVEAAVQHVRKVVDSIRNLDVTKDRDIIDDLTMTRMYSKRREHY 773
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
+++ PH+ VA ++ G+ I ++I + RA + E ++ N+ + I
Sbjct: 774 KNKQ--PHITVAEKMEQRTGSLPPVGERIPFVII--AGKDLFVNRAEDPEYVRENN-VPI 828
Query: 994 DVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
DV+YY+ +QI P V R+L + G D V +
Sbjct: 829 DVDYYVKKQILPPVERILG-VFGVDLVNL 856
>gi|146421489|ref|XP_001486690.1| hypothetical protein PGUG_00067 [Meyerozyma guilliermondii ATCC 6260]
Length = 1075
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 216/413 (52%), Gaps = 44/413 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR--------MLQDSDIT 677
Y G V+EP +G+YD I +DF+SLYPSI+ +N+C+TT+ + D +T
Sbjct: 555 YEGATVIEPVRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLSKNSIAAFNLSKDDYTLT 614
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ + +L+ +R++ K +K D+L + RQ ALK++A
Sbjct: 615 PNGDYFVKEHKRKGILPTILHELISARKKAKVDLKNETDPFRKDVL---NGRQLALKISA 671
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDTD 786
NS+YG G + +++ VTA GR ++ TK+ V+ + + +VIYGDTD
Sbjct: 672 NSVYGFTGATIGKLPCLAISSSVTAFGRVMIEETKNEVQSRYTTENGYDYDAQVIYGDTD 731
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D ++ K+G + + ++ +K ++L+ + VY LL+ KK+YA L ++
Sbjct: 732 SVMVKFGHQDIETCMKLGEEAANYVSQKFKNPIKLEFEKVYFPYLLINKKRYAGLYWTR- 790
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR-LQNIHEHMK 904
+ + KG++ VRRD +L VI+++L +Y L++R + +K
Sbjct: 791 --PEKFDKMDTKGIETVRRDNCRLVQN----VITKVL------EYILEERNVDKAERFVK 838
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL V L+ L ITK +K EY ++A H+++A R+ + GD ++
Sbjct: 839 QTIADLLQNRVDLSQLVITKAYSK--HEYAAKQA--HIELAERMKKRDPGSAPTLGDRVA 894
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I +++ + + L+N+ L IDV YYL Q+ + R+ EPI G
Sbjct: 895 YVIINSSSTKNYEKSEDPLFVLENS--LPIDVKYYLENQLANPLMRIFEPILG 945
>gi|452823008|gb|EME30022.1| DNA polymerase delta subunit 1 [Galdieria sulphuraria]
Length = 1070
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 241/489 (49%), Gaps = 58/489 (11%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPD-KQYGKNKKEGEETG 613
N ME R V G L+ L G + LL +S ++PD K N E E+
Sbjct: 496 NYMELAR---VAGIPLAWLLSRGHMIKVVSLLHRKAFPESLLIPDLKNTSHNSSEEAES- 551
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP----VR 669
Y G V+EPK+GFY I +DF SLYPSI+ +NIC++T+ V+
Sbjct: 552 ------------YEGATVIEPKRGFYKMPIATLDFASLYPSIMMAHNICYSTLVRKDRVK 599
Query: 670 MLQDSDI----TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLM 722
L+ D + C P V G+L ++ L+ +R+ K ++Q P L S L
Sbjct: 600 YLKPEDYIKSPSGDCYVRP--SVKKGVLSKILEDLLSARKVAKRELEQATDPFLRSVL-- 655
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--LNYEV 780
+ RQ ALK++AN++YG G + ++A +TA GR ++ TKSLVE+ + V
Sbjct: 656 --NGRQLALKISANAVYGFTGASRGKLPCTEISASITAFGRRMIETTKSLVESKFPSSVV 713
Query: 781 IYGDTDSLMISCNVN-DYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYA 838
IYGDTDS+M+ + + +G Q ++ + K ++L+ + Y LL++KK+YA
Sbjct: 714 IYGDTDSVMVKFRDDLTLEESMSLGQQAADIISQSFPKPIKLEFEKCYYPYLLIQKKRYA 773
Query: 839 ALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
L +K + KM C KG++ VRRD +L + V+ ++L E+ +Q
Sbjct: 774 GLLWTKTETYDKMDC----KGIETVRRDNCKLVANVVSKVLEKLLVERD---------VQ 820
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
+ +KK +DL V ++LL I+K+L+KA +Y +A HV + +L +
Sbjct: 821 GAIDFVKKTISDLLQNKVDISLLVISKELSKAAADYDANQA--HVTLYKKLYQRDPGSAP 878
Query: 958 Q-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIE 1015
GD I Y+ + + A +RA + I L++N L +D YYL + + R+ EPI
Sbjct: 879 SLGDRIPYVTIKGRKDQPAHERAEDPIYVLEHN--LPLDTEYYLKNMLRKPLERIFEPII 936
Query: 1016 GTDAVRIAE 1024
G + + E
Sbjct: 937 GKNVSSLFE 945
>gi|325969294|ref|YP_004245486.1| DNA polymerase Pol2 [Vulcanisaeta moutnovskia 768-28]
gi|323708497|gb|ADY01984.1| DNA polymerase Pol2 [Vulcanisaeta moutnovskia 768-28]
Length = 784
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 233/463 (50%), Gaps = 70/463 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+++++ G L + R E+++ + ++ + P N++E
Sbjct: 359 IQLSSISGLPLDQVGAASVGARVEWMIFYEAVKRGELAP------NREE----------- 401
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R Y G +VLEP+ G ++ I ++DF+S+YPSI+ +YN+ T+ +L D D
Sbjct: 402 -RPYETYKGAVVLEPRPGLHED-IAVIDFSSMYPSIMMKYNVSPDTL---VLGDCDD--- 453
Query: 680 CEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
C PE + G+ P ++ LVESRR+V+ LMK+ +S + RQ+ALK+
Sbjct: 454 CHVAPEVNYKFRKSPEGLYPGLLRMLVESRRKVRELMKKYPENSPEWTLLNERQRALKVM 513
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
AN+MYG G+ +R++ + +A VTA GR +L ++L+ +IYGDTDSL +
Sbjct: 514 ANAMYGYCGWLGARWYRREVAEAVTAWGRNLLKTVIEKAKSLSLPIIYGDTDSLFVR--- 570
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICS 853
N D V + N I +E ++ +D VY+ +L + KK+Y L+I +G++
Sbjct: 571 NISDKVDALINYINNELG-----FDVKVDKVYRRVLFTEAKKRYVGLTI----DGEI--- 618
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYSLDDRLQNIHEHMKKIRTDL 910
+I G + R DW+++A + + V +L D Y +++I + +K + D+
Sbjct: 619 -DIVGFEAARGDWAEIAKDVQESVAEIVLTTGDVSKAVSY-----VKSIIDKVKAYQFDI 672
Query: 911 DNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG 970
D+ + I K L K+ EY + PHV A +L K+ +GD I Y++ + G
Sbjct: 673 DD-------VIIWKTLDKSLNEY--KVLTPHVAAAKQLVEAGY-KVGKGDMIGYVVVKGG 722
Query: 971 TSEAATQRAYNIEELKNNSKLK-IDVNYYLSQQIHPVVTRLLE 1012
+ AY ++ ++ IDV+YY+ +QI P R+LE
Sbjct: 723 ----GAKLAYKVKPYILVKDIREIDVDYYVEKQIVPAAMRILE 761
>gi|241993500|ref|XP_002399458.1| DNA polymerase delta catalytic subunit, putative [Ixodes scapularis]
gi|215492989|gb|EEC02630.1| DNA polymerase delta catalytic subunit, putative [Ixodes scapularis]
Length = 1018
Score = 159 bits (402), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 233/483 (48%), Gaps = 62/483 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL E+ V+P E GE
Sbjct: 447 NYMEMARVTGV---PLTYLLSRGQQIKVVSQLLRKAAEQDLVMPTVH--------SEAGE 495
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVR 669
++G V+EP KGFY I +DF+SLYPSI+ +N+C+TT+
Sbjct: 496 D----------FTGATVIEPAKGFYSVPIATLDFSSLYPSIMMAHNLCYTTVLDSKQREA 545
Query: 670 MLQDSDITTLC-EYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
+ D I T ++ + V G+LP ++ L+ +R++ K +K SD + D
Sbjct: 546 LRADEFIRTPSGDHFVKASVRKGLLPEILEDLLAARKKAKTDLKN---ESDPFRKKVLDG 602
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LN 777
RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE +
Sbjct: 603 RQLALKISANSVYGFTGAQVGKLPCLAISQSVTAFGRMMIEQTKREVEERYTRANGYPAD 662
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKK 836
+VIYGDTDS+MI V+ + ++G + + K + + L+ + VY LL+ KK+
Sbjct: 663 AKVIYGDTDSVMIRFGVDSLEKAMELGREAANFVTEKFVRPINLEFEKVYFPYLLINKKR 722
Query: 837 YAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ ++ KM C KG++ VRRD L + + +IL E+ D ++
Sbjct: 723 YAGLLYTRPDAHDKMDC----KGIETVRRDNCPLVANLINTCLEKILIERD-PDGAVAFA 777
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
Q I DL V ++ L ITK+LTK EY ++A HV++A R+ ++
Sbjct: 778 KQTI--------ADLLCNRVDISQLVITKELTKNDGEYAAKQA--HVELANRMRKRDAGS 827
Query: 956 LKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
GD + Y+I AA ++ + I L+NN + ID YYL Q+ + R+ EP
Sbjct: 828 APNLGDRVPYVIVAASKGTAAYLKSEDPIYVLENN--VPIDTQYYLDNQLSKPLLRIFEP 885
Query: 1014 IEG 1016
I G
Sbjct: 886 ILG 888
>gi|2581886|gb|AAC47770.1| DNA polymerase alpha [Leishmania donovani]
Length = 308
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 120/186 (64%), Gaps = 13/186 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y +N K G + E GK
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQNFKRGRDDDEEEDGK- 184
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
+KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 185 -RKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENGSEIDVPPPE 243
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 244 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKIEKDANNLAL-LEIRQKAL 302
Query: 732 KLTANS 737
KLTANS
Sbjct: 303 KLTANS 308
>gi|145592085|ref|YP_001154087.1| DNA polymerase II [Pyrobaculum arsenaticum DSM 13514]
gi|145283853|gb|ABP51435.1| replicative DNA polymerase I [Pyrobaculum arsenaticum DSM 13514]
Length = 786
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 231/479 (48%), Gaps = 76/479 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E++LL + V P N++E
Sbjct: 355 IQLSSVSGLPLDQVAAASVGNRVEWMLLRYAYGLGEVAP------NREE----------- 397
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ--DSDIT 677
R+ Y G +VLEPK G Y ++L DF+S+YP+++ YN+ P L+ + D
Sbjct: 398 -REYEPYKGAIVLEPKPGLYGDVLVL-DFSSMYPNVMMRYNLS----PDTYLEPGEPDPP 451
Query: 678 TLCEYLPE--HQV---DTGILPSEIKKLVESRRQVKALMK--QPNLSSDLLMQYDIRQKA 730
PE H+ G +P +++LV RR V+ MK QP S ++ D RQKA
Sbjct: 452 EGVYVAPEVGHRFRKEPPGFIPQVLRRLVTLRRAVREEMKKYQPETSEYRIL--DERQKA 509
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LK+ AN+MYG G+ +R++ + +A VTA R IL + L VIYGDTDSL +
Sbjct: 510 LKIMANAMYGYTGWVGARWYKKEVAESVTAFARAILKDVIGYARRLGIMVIYGDTDSLFV 569
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGK 849
+ K+ + + +E+ D Y+ +L + KK+YA L L +G+
Sbjct: 570 KKG----GDLEKLARYVDEKYG-----IEIKADKDYEKVLFTEAKKRYAGL----LRDGR 616
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
+ +I G +VVR DWS+LA E VI IL + L + Q + +++K +
Sbjct: 617 I----DIVGFEVVRGDWSELAKEVQLKVIELILKAR-----DLSEARQRVIKYVKDVIER 667
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
L +G L L I K L K EY + PHV+ AL L K+ +G TI Y+I +
Sbjct: 668 LKSGKFDLDDLIIWKTLDKELGEY--KAHPPHVRAALILKK-KGYKVGRGTTIGYVIVKG 724
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
G E ++R ++ + + KID++YY+ +Q+ P A+RIAE +G+
Sbjct: 725 G--EKVSER--SLPYILVDDLAKIDIDYYIEKQVIPA------------ALRIAEVIGV 767
>gi|440635761|gb|ELR05680.1| DNA polymerase delta subunit 1 [Geomyces destructans 20631-21]
Length = 1102
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 237/493 (48%), Gaps = 70/493 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+P+++ E +
Sbjct: 525 NYTEMARVTGVPFNFLL-----SRGQQVKFVSQLFRKALEQKLVIPNQRT-------EAS 572
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
GE Y G V+EP +G+YD I +DF SLYPSIIQ +N+C+TT+
Sbjct: 573 GEQ----------YEGATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKASV 622
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+ + +D D +T + + G+L + +L+ +R+Q K A+ P + L
Sbjct: 623 DKLGLKKDEDYIVTPNGDMFCTAKQRKGLLTQILDELLTARKQAKRELAVETDPFKKAVL 682
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G + +A T+ GR+++ TK+ VE
Sbjct: 683 ----NGRQLALKISANSVYGLTGATVGKLPCLEIAGSTTSYGRQMIEKTKAEVEAKYTIA 738
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYML 830
+ +VIYGDTDS+M+ D K+G + +K K ++L+ + VY L
Sbjct: 739 NGYAHDAQVIYGDTDSVMVKFGTKDLAESMKLGEEAAQYVSSKFIKPIKLEFEKVYFPYL 798
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L +N + KG++ VRRD +L + V+ IL
Sbjct: 799 LINKKRYAGLY---WTNPDKYDKMDTKGIETVRRDNCRLVQTTIETVLRMIL-------- 847
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D +Q +++K +DL V + L ITK L KA +Y +++A HV++A R+
Sbjct: 848 -IDQDVQGAQDYVKDTISDLLQNKVDMAKLVITKALAKA--DYANKQA--HVELAERMRK 902
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I + +R+ + + L++N + ID YYL Q+ +
Sbjct: 903 RDAGSAPTLGDRVAYVIIKGAAGAKNFERSEDPLYVLEHN--VPIDTKYYLDNQLAKPLG 960
Query: 1009 RLLEPIEGTDAVR 1021
R+ EP+ G R
Sbjct: 961 RIFEPMLGETRAR 973
>gi|2581898|gb|AAC47776.1| DNA polymerase alpha [Leishmania infantum]
Length = 308
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 120/186 (64%), Gaps = 13/186 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y +N K G + E GK
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQNFKRGRDDEEEEDGK- 184
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
+KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 185 -RKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRESGSEIDVPPPE 243
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 244 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKIEKDANNLAL-LEIRQKAL 302
Query: 732 KLTANS 737
KLTANS
Sbjct: 303 KLTANS 308
>gi|2581884|gb|AAC47769.1| DNA polymerase alpha [Leishmania deanei]
gi|2581894|gb|AAC47774.1| DNA polymerase alpha [Leishmania hertigi]
Length = 308
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 120/186 (64%), Gaps = 13/186 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL GGRSER E+LLLH FH+ ++ PD+ K+ ++ GE + G
Sbjct: 127 RLTTIAGNLWSRTLFGGRSERIEYLLLHTFHDLKFITPDRYVQDFKRSRDDEGEED---G 183
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 184 KRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRKDQSVIDVPPPE 243
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + ILP IK LV+SRR+VK LMK ++ L + +IRQ+AL
Sbjct: 244 NLICASCAGAGLSAPCLHKCILPKVIKSLVDSRREVKRLMKTEKDANSLAL-LEIRQRAL 302
Query: 732 KLTANS 737
KLTANS
Sbjct: 303 KLTANS 308
>gi|324120684|dbj|BAJ78733.1| DNA polymerase delta catalytic subunit [Lepidocampa weberi]
Length = 1096
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 235/484 (48%), Gaps = 63/484 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + +L ++ ++P Q
Sbjct: 526 NYMEMARVTGV---PLSSLLTRGQQVKVMSQILRKAKTQNLIVPTYQ------------- 569
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+KG + + G V+EP KG+Y+ I +DF+SLYPSI+ +N+C+TT+ VR D
Sbjct: 570 -SKGSDEQ---FEGATVIEPVKGYYNVPIATLDFSSLYPSIMMAHNLCYTTL-VRPGLDK 624
Query: 675 DI-------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YD 725
++ T + + G+LP ++ L+ +R++ K +K+ +D + D
Sbjct: 625 NLNPTDYIRTPSGNLFVKSALRKGLLPDILENLLSARKKAKDDLKK---ETDPFKRKVLD 681
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--------- 776
RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 682 GRQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFGRTMIEFTKKEVEERYNRSQGAEH 741
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKK 835
+ +VIYGDTDS+M+ V +G + + K + + L+ + VY LL+ KK
Sbjct: 742 DAQVIYGDTDSVMVKFGVQTVKEAMALGKEAAEYVSAKFVQPIRLEFEKVYFPYLLINKK 801
Query: 836 KYAALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
+YA L ++ + KM C KG++ VRRD L ++ + +IL +D
Sbjct: 802 RYAGLYFTRPEIHDKMDC----KGIETVRRDNCPLVAKLITTCLEKIL---------IDR 848
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
H +++ +DL V ++ L ITK+LTK +EY ++A HV++A ++ ++
Sbjct: 849 DPNGAKTHAQQVISDLLCNRVDISQLVITKELTKTDKEYAAKQA--HVELANKMRKRDAG 906
Query: 955 KL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
K GD + Y+I A Q+A + I L+NN + ID YYL Q+ + R+ E
Sbjct: 907 TAPKLGDRVPYVIVNATKGTPAYQKAEDPIYVLENN--IPIDCVYYLENQLAKPLLRIFE 964
Query: 1013 PIEG 1016
PI G
Sbjct: 965 PILG 968
>gi|115387887|ref|XP_001211449.1| DNA polymerase delta catalytic subunit [Aspergillus terreus NIH2624]
gi|114195533|gb|EAU37233.1| DNA polymerase delta catalytic subunit [Aspergillus terreus NIH2624]
Length = 1104
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 241/489 (49%), Gaps = 73/489 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+P N+K +E
Sbjct: 528 NYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKALEQQLVIP------NQKSNDEQ 576
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP +G+Y I +DF SLYPSIIQ +N+C+TT+
Sbjct: 577 D------------YEGATVIEPVRGYYGVPIATLDFASLYPSIIQAHNLCYTTLLNKNSV 624
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+ + +D D +T +V G+L +++L+ +R++ K A+ P + L
Sbjct: 625 EKLNLKKDEDYIVTPNGHMFCTTKVRKGLLSQILEELLTARKKAKKDLAIETDPFKKAVL 684
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G + P+A+ T+ GR+++ TK VE
Sbjct: 685 ----NGRQLALKISANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKQEVEARYTIA 740
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYML 830
+ + +VIYGDTDS+M+ V+ + K+G + +K K ++L+ + VY L
Sbjct: 741 NGYSHDAKVIYGDTDSVMVKFGVSTLEEAMKLGQEASEYVSSKFIKPIKLEFEKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
L+ KK+YA L +K KM + KG++ VRRD L + V+ +IL
Sbjct: 801 LINKKRYAGLYWTKTDKYDKM----DTKGIETVRRDNCLLVQNVIETVLHKIL------- 849
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D + E++K+ +DL + ++ L ITK L+K ++Y ++A HV++A R+
Sbjct: 850 --IDRDIDGAQEYVKETISDLLQNKIDMSKLVITKALSK--DDYKAKQA--HVELAERMK 903
Query: 950 NTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVV 1007
++ GD ++Y++ + +R+ + I L+NN + ID YYL Q+ +
Sbjct: 904 KRDAGSAPTLGDRVAYVMIKGAGGSKNYERSEDPIYVLENN--IPIDTKYYLDNQLANPL 961
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 962 GRIFEPILG 970
>gi|379003208|ref|YP_005258880.1| DNA polymerase (pol2) [Pyrobaculum oguniense TE7]
gi|375158661|gb|AFA38273.1| DNA polymerase (pol2) [Pyrobaculum oguniense TE7]
Length = 786
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 229/477 (48%), Gaps = 72/477 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E++LL + V P N++E
Sbjct: 355 IQLSSVSGLPLDQVAAASVGNRVEWMLLRYAYGLGEVAP------NREE----------- 397
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ--DSDIT 677
R+ Y G +VLEPK G Y ++L DF+S+YP+++ YN+ P L+ + D
Sbjct: 398 -REYEPYKGAIVLEPKPGLYSDVLVL-DFSSMYPNVMMRYNLS----PDTYLEPGEPDPP 451
Query: 678 TLCEYLPE--HQV---DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
PE H+ G +P +++LV RR V+ MK+ + D RQKALK
Sbjct: 452 EGVYVAPEVGHRFRKEPPGFIPQVLRRLVALRRAVREEMKKYQPDTPEYRVLDERQKALK 511
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
+ AN+MYG G+ +R++ + +A VTA R IL + L VIYGDTDSL +
Sbjct: 512 IMANAMYGYTGWVGARWYKKEVAESVTAFARAILKDVIDYARRLGIVVIYGDTDSLFVKK 571
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMI 851
+ K+ + + +E+ +D Y+ +L + KK+YA L L +G++
Sbjct: 572 G----GDLEKLARYVDEKYG-----IEIKVDKDYEKVLFTEAKKRYAGL----LRDGRI- 617
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
+I G +VVR DWS+LA E VI IL + L + Q + +++K + L
Sbjct: 618 ---DIVGFEVVRGDWSELAKEVQLKVIELILKAR-----DLSEARQRVIKYVKDVIERLK 669
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
+G L L I K L K EY + PHV+ AL L K+ +G TI Y++ + G
Sbjct: 670 SGKFDLDDLIIWKTLDKDLGEY--KAYPPHVRAALILKK-KGYKVGRGTTIGYVVVKGG- 725
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
E ++R ++ + + KIDV+YY+ +Q+ P A+RIAE +G+
Sbjct: 726 -EKVSER--SLPYILVDDLAKIDVDYYIEKQVIPA------------ALRIAEVIGV 767
>gi|336259478|ref|XP_003344540.1| hypothetical protein SMAC_07548 [Sordaria macrospora k-hell]
gi|380093254|emb|CCC08912.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1071
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 212/417 (50%), Gaps = 50/417 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---------PVRMLQDSDI 676
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT+ ++ +D +
Sbjct: 544 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLIKKRDIERWNLKKDEDYIV 603
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q K A+ K P + L + RQ ALK+
Sbjct: 604 TPNGDMFVTTKQRKGLLAQILEELLSARKQAKRELAVEKDPFKKAVL----NGRQLALKV 659
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G N + +A+ VT+ GR+++ TK VE + + +VIYGD
Sbjct: 660 SANSVYGLTGATNGKLPCLEIASSVTSFGRQMIERTKKEVEERYTIANGYSHDAQVIYGD 719
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSE--CNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
TDS+M+ D K+G Q SE K K ++L+ + VY LL+ KK+YA L
Sbjct: 720 TDSVMVKFGTKDLAEAMKLG-QDASEYVSGKFVKPIKLEFEKVYFPYLLINKKRYAGLYW 778
Query: 843 SKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+K KM + KG++ VRRD L + V+ IL +D +
Sbjct: 779 TKPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVPGAEA 825
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GD 960
++K DL + ++ L ITK LTK E Y ++A HV++A R+ ++ GD
Sbjct: 826 YVKDTIADLLQNKIDMSKLVITKALTK--ENYDAKQA--HVELAQRMKKRDAGSAPGLGD 881
Query: 961 TISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + +R+ + I L++N + ID YYL Q+ + R+ EPI G
Sbjct: 882 RVAYVMVKGAAGSKNFERSEDPIYVLEHN--VPIDTKYYLDNQLAKPLGRIFEPILG 936
>gi|62736744|gb|AAX97698.1| DNA polymerase [Pyrobaculum arsenaticum]
Length = 786
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 231/479 (48%), Gaps = 76/479 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E++LL + V P N++E
Sbjct: 355 IQLSSVSGLPLDQVAAASVGNRVEWMLLRYAYGLGEVAP------NREE----------- 397
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ--DSDIT 677
R+ Y G +VLEPK G Y ++L DF+S+YP+++ YN+ P L+ + D
Sbjct: 398 -REYEPYKGAIVLEPKPGLYGDVLVL-DFSSMYPNVMMRYNLS----PDTYLEPGEPDPP 451
Query: 678 TLCEYLPE--HQV---DTGILPSEIKKLVESRRQVKALMK--QPNLSSDLLMQYDIRQKA 730
PE H+ G +P +++LV RR V+ MK QP S ++ D RQKA
Sbjct: 452 EGVYVAPEVGHRFRKEPPGFIPQVLRRLVTLRRAVREEMKKYQPETSEYRIL--DERQKA 509
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMI 790
LK+ AN+MYG G+ +R++ + +A VTA R IL + L VIYGDTDSL +
Sbjct: 510 LKIMANAMYGYTGWVGARWYKKEVAESVTAFARAILKDVIGYARRLGIMVIYGDTDSLFV 569
Query: 791 SCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGK 849
+ K+ + + +E+ D Y+ +L + KK+YA L L +G+
Sbjct: 570 KKG----GDLEKLARYVDEKYG-----IEIKADKDYEKVLFTEAKKRYAGL----LRDGR 616
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
+ +I G +VVR DWS+LA E VI IL + L + Q + +++K +
Sbjct: 617 I----DIVGFEVVRGDWSELAKEVQLKVIELILKAR-----DLSEARQRVIKYVKDVIER 667
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
L +G L L I K L K EY + PHV+ AL L K+ +G TI Y+I +
Sbjct: 668 LKSGKFDLDDLIIWKTLDKELGEY--KAHPPHVRAALILKK-KGYKVGRGTTIGYVIVKG 724
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
G E ++R ++ + + KID++YY+ +Q+ P A+RIAE +G+
Sbjct: 725 G--EKVSER--SLPYILVDDLAKIDIDYYIEKQVIPA------------ALRIAEVIGV 767
>gi|156936857|ref|YP_001434653.1| DNA polymerase II [Ignicoccus hospitalis KIN4/I]
gi|156565841|gb|ABU81246.1| replicative DNA polymerase I [Ignicoccus hospitalis KIN4/I]
Length = 786
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 209/404 (51%), Gaps = 41/404 (10%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR----MLQDSDI 676
RK A+Y G +VL P KG ++ +L DF+S+YP+I+ +YN+ T+ VR + D
Sbjct: 404 RKVASYKGAIVLRPLKGVHENVAVL-DFSSMYPNIMIKYNVGPDTL-VRPGEKVSPDEVY 461
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
+ Y+ + + D + L+ R+++K MK + L D RQKA+K+ AN
Sbjct: 462 VSPAGYMFKKRPD-AFFKRSLVTLLNLRKEIKERMKSLSPEDPLYKLLDNRQKAVKVLAN 520
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
+ YG +G+P++R++ + A VT+ GRE++L + L +VIYGDTDSL + + D
Sbjct: 521 AHYGYMGWPHARWYCRECAEAVTSWGRELILKAIQMARELGLKVIYGDTDSLFV---IYD 577
Query: 797 YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQE 855
+ V K+ +I+ E E+ ID +YK + + KK+YA + L +G++ +
Sbjct: 578 KEKVEKLIERIEKELG-----FEIKIDKIYKKLFFTEAKKRYAGI----LEDGRI----D 624
Query: 856 IKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFV 915
+ G + VR DW+++A E + +I +L E + E++ I L G V
Sbjct: 625 VVGFEAVRGDWAEVAKEVQEKIIEIVLKEGD---------VNKAVEYVNSIIEKLRRGEV 675
Query: 916 PLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAA 975
P+ L I K L K+ +EY PHV A R ++K+GD + Y+I + G + +
Sbjct: 676 PIEKLVIWKTLEKSLDEYKSEP--PHVAAAKRAIE-RGYEVKKGDKVGYVIVK-GVGKLS 731
Query: 976 TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+ RA+ ++ K ID NYY+ Q+ P R+L T+A
Sbjct: 732 S-RAWPWFLVQ---KEMIDYNYYIDHQVIPAAMRILGYFGITEA 771
>gi|294660060|ref|XP_002770696.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
gi|199434442|emb|CAR66020.1| DEHA2G22308p [Debaryomyces hansenii CBS767]
Length = 1080
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 213/413 (51%), Gaps = 44/413 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML--------QDSDIT 677
Y G V+EP +G+YD I +DF+SLYPSI+ +N+C+TT+ + D +T
Sbjct: 560 YEGATVIEPIRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNKQTIKNFNLTEDDYTLT 619
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y + GILP+ + +L+ +R++ K+ +K D+L + RQ ALK++A
Sbjct: 620 PNGDYFVKDHKKKGILPTILDELLTARKKAKSDLKMETDPFKRDVL---NGRQLALKISA 676
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ VE + +VIYGDTD
Sbjct: 677 NSVYGFTGATIGKLPCLAISSSVTAFGREMIEKTKNEVEEFYSIKNGHPFDAQVIYGDTD 736
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D + K+G + + + K K ++L+ + VY LL+ KK+YA L +
Sbjct: 737 SVMVKFGYEDLEKCMKLGEEAANFVSTKFKKPIKLEFEKVYFPYLLINKKRYAGLYWTST 796
Query: 846 SN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
KM + KG++ VRRD +L V+ IL E+ +D ++ +K
Sbjct: 797 EKYDKM----DTKGIETVRRDNCRLVQNVITKVLEFILQER-----DVDKAVR----FVK 843
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL V L+ L ITK +K +Y+ ++A HV++A R+ + GD ++
Sbjct: 844 QTIADLLQNRVDLSQLVITKAYSK--HDYSAKQA--HVELAERMKKRDPGSAPTLGDRVA 899
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I +++ + + L+N+ L IDV YYL Q+ + R+ EPI G
Sbjct: 900 YVIISSSSTKNYEKSEDPLYVLENS--LPIDVKYYLENQMSNPLMRIFEPILG 950
>gi|324120698|dbj|BAJ78740.1| DNA polymerase delta catalytic subunit [Mnais pruinosa pruinosa]
Length = 1095
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 162/565 (28%), Positives = 263/565 (46%), Gaps = 92/565 (16%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL EK +V+P G ++
Sbjct: 521 NYMEMARVTGV---PLSCLLTRGQQIKVVSQLLRKAKEKDFVIPTYSGGGQDEQ------ 571
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ-- 672
+ G V+EP +G+Y I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 572 -----------FEGATVIEPLRGYYSDPIATLDFSSLYPSIMMAHNLCYTT----LLQPG 616
Query: 673 ----------DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
D T Y V G+LP ++ L+ +R++ K +K+ +D L
Sbjct: 617 SKEKLGLSPEDYVQTPAGNYFVRQSVRKGLLPEILENLLSARKKAKDDLKE---ETDPLR 673
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 674 RKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAFGRTMIEQTKQEVETKYCVA 733
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYML 830
+ + VIYGDTDS+M+ V + +G + +K K ++L+ + VY L
Sbjct: 734 RGYSHDAVVIYGDTDSVMVKFGVKSLEEAMALGREAAEYVSSKFVKPIKLEFEKVYFPYL 793
Query: 831 LLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
L+ KK+YA L ++ KM C KG++ VRRD L + + ++L E+ D
Sbjct: 794 LINKKRYAGLYFTRPDKYDKMDC----KGIETVRRDNCPLVANMMNTCLQKLLIERD-PD 848
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
++ + K++ DL + ++ L +TK+L K ++Y ++A HV++A+++
Sbjct: 849 GAV--------AYAKQVIADLLCNRIDISQLVVTKELAK--QDYAAKQA--HVELAIKMR 896
Query: 950 NTN-SKKLKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ + K GD + Y++ A +A + I L+NN + ID NYYL Q+ +
Sbjct: 897 KRDPAAAPKLGDRVPYVLIAAAKGTPAYMKAEDPIYVLENN--IPIDSNYYLENQLSKPL 954
Query: 1008 TRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEF 1067
R+ PI G + AE + L R++ ++ S+ L F K E
Sbjct: 955 LRIFSPILGDNK---AESVLLRGDHTRTK---AVVTSKVGALSA---------FTQKRE- 998
Query: 1068 TCMNPSCKQVNTVEAPTR-LSTHGV 1091
TC+ CK V E+PT + TH V
Sbjct: 999 TCL--GCKAVLPKESPTGPVCTHCV 1021
>gi|354548476|emb|CCE45212.1| hypothetical protein CPAR2_702240 [Candida parapsilosis]
Length = 1080
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 157/534 (29%), Positives = 254/534 (47%), Gaps = 78/534 (14%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM------LQDSDITTL 679
+ G V+EP++G+YD I +DF+SLYPSI+ +N+C+TT+ R L++ D T
Sbjct: 558 FEGATVIEPERGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLNRNSIKAFDLKEEDYTKT 617
Query: 680 --CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTA 735
+Y GILP+ + +L+ +R++ K +K D+L + RQ ALK++A
Sbjct: 618 PNGDYFVHADKKKGILPTILNELLTARKKAKTDLKNEKDPFKKDVL---NGRQLALKISA 674
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTD 786
NS+YG G + +++ VTA GRE++ TK+ V+ + VIYGDTD
Sbjct: 675 NSVYGFTGATVGKLPCLAISSSVTAFGREMIEKTKNEVQERYSKKNGYPYDAHVIYGDTD 734
Query: 787 SLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKL 845
S+M+ D + K+G + + + K ++L+ + VY LL+ KK+YA L ++
Sbjct: 735 SVMVKFGYQDLKTCMKLGEEAANYVSTKFQNPIKLEFEKVYFPYLLINKKRYAGLYWTRP 794
Query: 846 SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
+ + KG++ VRRD +L V+ IL+E++ D+ Q +K+
Sbjct: 795 DKFDKM---DTKGIETVRRDNCRLVQNVITKVLEFILEERNV------DKAQRF---VKQ 842
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISY 964
DL V L+ L ITK +K +Y+ ++A HV++A R+ + GD ++Y
Sbjct: 843 TIADLLQNRVDLSQLVITKAYSK--HDYSAKQA--HVELAERMRKRDPGSAPTLGDRVAY 898
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
+I + G + + + L+N+ L IDV YYL QQ+ + R+ PI G +
Sbjct: 899 VIIKTGGDKNYEKSEDPLYVLENS--LPIDVKYYLEQQMTKPLERIFIPILGESKTK--- 953
Query: 1025 CLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPT 1084
L +I+ S G+ +F K E C+N CK P
Sbjct: 954 ------ELLAGAHTRTIKMSAPKTGGL-------MRFAKKSE-VCVN--CK------TPL 991
Query: 1085 RLSTHGVVFVLDECINPECKVPP-YTYLPHLINKLSQDMNKYIVKYYEGWLKCE 1137
+ HG + CI E K P YT N LSQ MN K+ W +C+
Sbjct: 992 KSGNHGA--LCHHCIE-EGKGPGLYT------NALSQ-MNYLENKFSRLWTECQ 1035
>gi|315231385|ref|YP_004071821.1| DNA polymerase I [Thermococcus barophilus MP]
gi|315184413|gb|ADT84598.1| archaeal DNA polymerase I [Thermococcus barophilus MP]
Length = 1138
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 191/370 (51%), Gaps = 27/370 (7%)
Query: 645 LMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESR 704
++ NSLYPSII +N+ T+ ++ D+ + Y G + S +++L+E+R
Sbjct: 767 ILTHNSLYPSIIITHNVSPDTLEREGCKNYDVAPIVGYKFCKDFK-GFISSILEELIETR 825
Query: 705 RQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGRE 764
++K MK + D RQKA+KL ANS YG +G+P +R++++ A VTA GR
Sbjct: 826 TKIKKEMK-ATIDPIKRKMLDYRQKAVKLLANSHYGYMGYPKARWYSKECAESVTAWGRT 884
Query: 765 -ILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDI 822
I + K + E ++V+Y DTD L + D +++ K + N KL LEL+
Sbjct: 885 YIEMTIKEIEEKFGFKVLYADTDGLYATIPDADAETIKKKAKEFLKYINSKLPGLLELEY 944
Query: 823 DGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL 882
+G Y + KK+YA + GK+ +G++VVRRDWS++A E V+ IL
Sbjct: 945 EGFYLRGFFVTKKRYAVID----EEGKITT----RGLEVVRRDWSEIAKETQAKVLEAIL 996
Query: 883 DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHV 942
D ++ E +KK+ DL VPL L I +Q+TK+ +EY + PHV
Sbjct: 997 K---------DGSVEKAVEIVKKVVEDLAKYKVPLEKLVIHEQITKSLDEY--KATGPHV 1045
Query: 943 QVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQ 1002
VA RL K++ G ISYII + + + RA + E + K K D +YY+ Q
Sbjct: 1046 AVARRL-KAKGIKVRPGMIISYIILKG--DKKISDRAILLSEY-DPKKHKYDPDYYIEHQ 1101
Query: 1003 IHPVVTRLLE 1012
+ P V R+LE
Sbjct: 1102 VLPAVLRILE 1111
>gi|324120738|dbj|BAJ78760.1| DNA polymerase delta catalytic subunit [Anacanthocoris striicornis]
Length = 1091
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 237/491 (48%), Gaps = 65/491 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL E Y+LP + + ++
Sbjct: 518 NYMEMARVTGVS---LSALLTRGQQIKVMSQLLRKSMESGYLLPTHRVNDSSEQ------ 568
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
+ G V+EP KG+Y I +DF+SLYPSI+ +N+C++T+
Sbjct: 569 -----------FEGATVIEPLKGYYKDPIATLDFSSLYPSIMIAHNLCYSTLIHAQQRNA 617
Query: 668 VRMLQDSDITTLCE-YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ + D TT CE Y + V G+LP ++ L+ +R++ K +K +D +
Sbjct: 618 LGLSPDQYSTTPCENYFVKTSVRKGLLPQILESLLTARKKAKFDLKN---ETDPFKRKVL 674
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------- 775
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 675 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIERTKQEVEQRYCIKNGYK 734
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKK 834
+ V+YGDTDS+M+ V+ + K+G + + K ++L+ + VY LL+ K
Sbjct: 735 FDSIVVYGDTDSVMVKFGVDSLEEAMKLGKEAAEYVSTKFISPIKLEFEKVYWPYLLINK 794
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L +KL KM C KG++ VRRD L + + ++L ++ D +++
Sbjct: 795 KRYAGLYYTKLDEYDKMDC----KGLETVRRDNCPLVANLLNTCLQKLLIDKD-PDAAIN 849
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
Q I +DL + ++ L ITK+L K +Y ++A HV++A ++ ++
Sbjct: 850 YAKQQI--------SDLLCNRLDISQLVITKELAKT--DYAGKQA--HVELANKMKKRDA 897
Query: 954 KKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K GD + ++I S A Q+A + + L+NN + +D YYL Q+ + R+
Sbjct: 898 GSAPKLGDRVPFVIVAAAKSTPAYQKAEDPMYVLENN--IPLDTTYYLENQLAKPLLRIF 955
Query: 1012 EPIEGTDAVRI 1022
PI G A I
Sbjct: 956 SPILGEKAESI 966
>gi|342179963|emb|CCC89437.1| putative DNA polymerase delta catalytic subunit [Trypanosoma
congolense IL3000]
Length = 1026
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 240/486 (49%), Gaps = 63/486 (12%)
Query: 552 VQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE 611
V N +E R+T V ++ L G+ + +LL ++ V+P E
Sbjct: 451 VVVNNVEMARVTGV---PIAWLLERGQQIKVFSMLLRKARARNLVVPTT---------EN 498
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML 671
+G +G Y G V+EP+KGFY+ I+ +DF SLYPSII +N+C++T+ VR
Sbjct: 499 SGIDQRG-------YEGATVIEPRKGFYNCPIVTLDFASLYPSIIIAHNLCYSTL-VRQS 550
Query: 672 Q----DSDI---TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
+ D D+ T V GILP ++ L+ +R+ + LMK ++S D L +Y
Sbjct: 551 EADKYDKDMISRTPTGHVFVRDNVFPGILPEVLQDLLAARKNARTLMK--DVSPDSL-EY 607
Query: 725 DI---RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYE-- 779
+ RQ ALK++ANS+YG G R L++ VT GR ++ TK VE Y+
Sbjct: 608 KVLNGRQLALKVSANSVYGFTGAQIGRLPCLELSSSVTGYGRMMIDETKRFVET-QYQGA 666
Query: 780 -VIYGDTDSLMISC----NVNDYDSV---FKIGNQIKSECNKLY-KQLELDIDGVYKYML 830
V+YGDTDS+MI ++D DS+ + G + + + K ++L+ + VY L
Sbjct: 667 MVVYGDTDSVMIKRVSEEPMSDKDSLQRAMEFGKEAAEVVSSNFPKPIKLEFEKVYFPYL 726
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L + + + KG++ VRRD L + V+++IL ++S
Sbjct: 727 LMNKKRYAGLLWTNTVRHDKL---DAKGIETVRRDNCPLVASVISGVLNRILIQRS---- 779
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+++ E +K DL + ++ L ITK +K+ +EY +A H+ + R+
Sbjct: 780 -----VESAVEFVKGTIRDLLLNRLDISQLVITKSFSKSEDEYAGAQA--HIALVERMRK 832
Query: 951 TNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ GD ++Y+I A +R+ + I L NN + ID YYL Q+ P +
Sbjct: 833 RDPASAPNVGDRVAYVIVRAAKGSKAYERSEDPIYVLDNN--IPIDTQYYLEHQLAPPLL 890
Query: 1009 RLLEPI 1014
R+ E +
Sbjct: 891 RVFEGV 896
>gi|154276096|ref|XP_001538893.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus NAm1]
gi|150413966|gb|EDN09331.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus NAm1]
Length = 1086
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 242/488 (49%), Gaps = 70/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+P+ +N+ E+
Sbjct: 509 NYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKALEQQLVIPNL---RNESTSEQ- 559
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP + FYD I +DF SLYPSIIQ +N+C+TT+
Sbjct: 560 -------------YEGATVIEPIRDFYDVPIATLDFASLYPSIIQAHNLCYTTLLKKSTI 606
Query: 667 ---PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
++ +D +T + +V G+L +++L+ +R++ K K+ + +D +
Sbjct: 607 DAHQMKEGEDYIVTPNGDRFCTSKVRKGLLTQILEELLGARKRAK---KELAVETDPFKK 663
Query: 724 YDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------- 774
+ RQ ALK++ANS+YG G + P+A+ T+ GR+++ TK VE
Sbjct: 664 AVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKEEVEAKYTIAN 723
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLL 831
+ + +V+YGDTDS+M+ + D K+G + +K ++L+ + VY LL
Sbjct: 724 GYSHDAKVVYGDTDSVMVKFGMKDLAEAMKLGQEAADYVSSKFINPIKLEFEKVYFPYLL 783
Query: 832 LKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
+ KK+YA L +K KM + KG++ VRRD ++ + V+ +IL
Sbjct: 784 INKKRYAGLYWTKPDKYDKM----DTKGIETVRRDNCRMVQTVIETVLRKIL-------- 831
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + ++K +DL + ++ L ITK L+K ++YT ++A HV++A R+
Sbjct: 832 -IDRDVDGAQSYVKDTISDLLQNKIDMSKLVITKALSK--KDYTAKQA--HVELAERMKK 886
Query: 951 TNSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
++ GD ++Y+I + G S+ + I L+NN + ID YYL Q+ +T
Sbjct: 887 RDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLENN--IPIDTKYYLDNQLAKPLT 944
Query: 1009 RLLEPIEG 1016
R+ EPI G
Sbjct: 945 RIFEPILG 952
>gi|398408323|ref|XP_003855627.1| DNA polymerase delta catalytic subunit [Zymoseptoria tritici IPO323]
gi|339475511|gb|EGP90603.1| hypothetical protein MYCGRDRAFT_35747 [Zymoseptoria tritici IPO323]
Length = 1107
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 242/490 (49%), Gaps = 74/490 (15%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N+L R ++ +F+ L E+ V+P+ K EG +
Sbjct: 530 NYTEMARVTGVPFNMLL-----SRGQQVKFISQLFRKALEQQLVVPNL-----KPEGSDE 579
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP +G+YD + +DF SLYPSI+Q +N+C+TT+
Sbjct: 580 ------------QYEGATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLLNKNAV 627
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQV-KALMKQPNLSSDLLM 722
+ + +D D +T + +V G+L +++L+ +R++ KAL + + ++
Sbjct: 628 EKLNLKKDEDYIVTPNGDLFCTTKVRKGLLSQILEELLGARKRAKKALAVETDPFKKAVL 687
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------ 776
+ RQ ALK++ANS+YG G N + +A+ T+ GR+++ TK VEN
Sbjct: 688 --NGRQLALKISANSVYGLTGATNGKLPCLAIASSTTSYGRQMIERTKEEVENRYTIANG 745
Query: 777 ---NYEVIYGDTDSLMISCNVNDYDSVFKIG-NQIKSECNKLYKQLELDIDGVYKYMLLL 832
+ +VIYGDTDS+M+ ND ++G + + +K K ++L+ + VY LL+
Sbjct: 746 YSHDAQVIYGDTDSVMVKFGPNDLAKAMELGQDAAEYVSSKFIKPIKLEFEKVYYPYLLI 805
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +N + + KG++ VRRD +L Q + E S +
Sbjct: 806 NKKRYAGLY---WTNTEKYDKMDTKGIETVRRDNCRLV---------QNVIETSLKMLLI 853
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
D +Q +++K+ ++L + ++ L ITK L+K +Y ++A H ++A R+ +
Sbjct: 854 DQDVQGAQDYVKETISELLQNRIDMSNLVITKALSKV--DYASKQA--HTELAERMRKRD 909
Query: 953 SKKLKQ-GDTISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPV 1006
+ GD ++Y++ + AA + Y E L++N L ID YYL Q+
Sbjct: 910 AGSAPALGDRVAYVMVKG----AAGAKGYEKSEDPMFVLEHN--LPIDTKYYLDNQLAKP 963
Query: 1007 VTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 964 LGRIFEPILG 973
>gi|2581882|gb|AAC47768.1| DNA polymerase alpha [Leishmania chagasi]
Length = 308
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 119/186 (63%), Gaps = 13/186 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y +N K G + E GK
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQNFKRGRDDEEEEDGK- 184
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
+KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ D+
Sbjct: 185 -RKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRESGSKIDVPPPE 243
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 244 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKIEKDANNLAL-LEIRQKAL 302
Query: 732 KLTANS 737
KLTANS
Sbjct: 303 KLTANS 308
>gi|2581880|gb|AAC47767.1| DNA polymerase alpha [Leishmania braziliensis]
gi|2581904|gb|AAC47779.1| DNA polymerase alpha [Leishmania panamensis]
Length = 307
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 121/186 (65%), Gaps = 14/186 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ K G + E + G
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQDFKRGRDDDEED---G 182
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 183 KRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRSEIDVPPPE 242
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 243 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDANNLAL-LEIRQKAL 301
Query: 732 KLTANS 737
KLTANS
Sbjct: 302 KLTANS 307
>gi|324120704|dbj|BAJ78743.1| DNA polymerase delta catalytic subunit [Phraortes illepidus]
Length = 1093
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 239/489 (48%), Gaps = 68/489 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L+ L G+ + LL EK Y++P G +++
Sbjct: 524 NYMEMSRVTGVS---LACLLTRGQQIKVVSQLLRKAREKGYLMPVYASGVQEEQ------ 574
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------PV 668
+ G V+EP+KG+Y I +DF+SLYPSI+ +N+C+TT+ +
Sbjct: 575 -----------FEGATVIEPRKGYYSDPITTLDFSSLYPSIMMAHNLCYTTLVNGPPDKL 623
Query: 669 RMLQDSDITT--LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ D I T C ++ + V G+LP ++ L+ +R++ K +K +D +
Sbjct: 624 SLTPDQYIKTPASCTFV-KSSVRKGLLPEILESLLSARKKAKVDLKN---ETDPFKRKVL 679
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-------- 776
D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 680 DGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQRYCIANGYK 739
Query: 777 -NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKK 834
+ VIYGDTDS+M+ V + ++G + +K + ++L+ + VY LL+ K
Sbjct: 740 HDASVIYGDTDSVMVKFGVTTLEEAMELGREAADYVTSKFVRPIQLEFEKVYFPYLLINK 799
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
K+YA L ++ KM C KG++ VRRD L + + ++L E+ D ++
Sbjct: 800 KRYAGLYFTRPDKYDKMDC----KGIETVRRDNCPLVANMMNTCLQKLLIERD-PDGAV- 853
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL---NN 950
+ K++ +DL V ++ L ITK+LTK +Y ++A HV++A ++ +
Sbjct: 854 -------TYTKEVISDLLCNRVDISKLVITKELTK--NDYAAKQA--HVELANKMKKRDP 902
Query: 951 TNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
N+ KL GD + Y+I + + A +A + + NS + ID YYL Q+ + R+
Sbjct: 903 GNAPKL--GDRVPYVIIKAAKNTPAYMKAEDPIYVLENS-IPIDSTYYLENQLSKPLLRI 959
Query: 1011 LEPIEGTDA 1019
PI G A
Sbjct: 960 FTPILGEKA 968
>gi|357613119|gb|EHJ68324.1| DNA polymerase delta catalytic subunit [Danaus plexippus]
Length = 974
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 216/417 (51%), Gaps = 45/417 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ-----DSDITTLC 680
+ G V+EPKKG+Y I +DF SLYPSI+ +N+C+TT+ +Q +SD T+
Sbjct: 453 FEGATVIEPKKGYYADPISTLDFASLYPSIMMAHNLCYTTLVPPNIQKEINLNSDDVTVT 512
Query: 681 E----YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
++ H+ G+LP ++ L+ +R++ KA +K+ L +L D RQ ALK++
Sbjct: 513 PSNNMFVKAHK-RKGLLPEILESLLAARKKAKADLKEEKDPLKRSVL---DGRQLALKIS 568
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-----NLNYE----VIYGDT 785
ANS+YG G + ++ VTA GR ++ T++ VE + Y+ VIYGDT
Sbjct: 569 ANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEFTRAEVEKKYTKSNGYKEDAVVIYGDT 628
Query: 786 DSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ V + ++G + +K K ++L+ + VY LL+ KK+YA L +K
Sbjct: 629 DSVMVKFGVKTLEESMELGREAAEFVTSKFVKPIKLEFEKVYYPYLLINKKRYAGLYFTK 688
Query: 845 LSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
KM C KG++ VRRD L S + ++L +D +
Sbjct: 689 PEKYDKMDC----KGIETVRRDNCPLISNMMSTCLQKLL---------IDRDPDGAINYA 735
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQGDTI 962
K++ +DL + ++ L ITK+LTK +Y ++A HV++A ++ ++ K GD +
Sbjct: 736 KQMISDLLCNRIDISQLVITKELTK--NDYAAKQA--HVELANKMKKRDAGTAPKLGDRV 791
Query: 963 SYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
Y++C + A +A + + NS + ID NYYL Q+ + R+ EPI G A
Sbjct: 792 PYVLCSAAKNTPAYMKAEDPIYVLENS-VPIDFNYYLENQLSKPLLRIFEPILGEKA 847
>gi|225555953|gb|EEH04243.1| DNA polymerase delta catalytic subunit [Ajellomyces capsulatus
G186AR]
Length = 1111
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 167/629 (26%), Positives = 292/629 (46%), Gaps = 100/629 (15%)
Query: 429 YLLPRSEHLKTKEPVSIAQVYSEFDQIATQYKILDFKSRKIEKK--YAFNLPGVP--DLS 484
YLL R+EHLK S +S I ++ F S++I + + N+ G DL
Sbjct: 408 YLLKRAEHLK----CSGFHFWSRLKHIPSRVGDARFSSKQIGNRESKSTNISGRIQLDLL 463
Query: 485 EYLEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAEK---- 540
+ ++ Y + L S + G + + + ++ G P++ +
Sbjct: 464 QLVQRDYQLRSYTLNS-----VCAQFLGEQKEDVHHTMITELFNGS-----PDSRRRLAV 513
Query: 541 -------FPSRISWCKYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFH 591
P R+ K N E R+T V N L R ++ +F+ L
Sbjct: 514 YCLKDAYLPQRL-MDKLMCLVNYTEMARVTGVPFNFLL-----SRGQQVKFISQLFRKAL 567
Query: 592 EKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSL 651
E+ V+P+ +N+ E+ Y G V+EP + FYD I +DF SL
Sbjct: 568 EQQLVIPNL---RNESTSEQ--------------YEGATVIEPIRDFYDVPIATLDFASL 610
Query: 652 YPSIIQEYNICFTTI---------PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVE 702
YPSIIQ +N+C+TT+ ++ +D +T + +V G+L +++L+
Sbjct: 611 YPSIIQAHNLCYTTLLKKSTIDAHQMKEGEDYIVTPNGDRFCTSKVRKGLLTQILEELLG 670
Query: 703 SRRQVKALMKQPNLSSDLLMQYDI--RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTA 760
+R++ K K+ + +D + + RQ ALK++ANS+YG G + P+A+ T+
Sbjct: 671 ARKRAK---KELAVETDPFKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTTS 727
Query: 761 KGREILLNTKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC 811
GR+++ TK VE + + +V+YGDTDS+M+ + D K+G +
Sbjct: 728 YGRQMIEKTKEEVEAKYTIANGYSHDAKVVYGDTDSVMVKFGMKDLAEAMKLGQEAADYV 787
Query: 812 -NKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQL 869
+K ++L+ + VY LL+ KK+YA L ++ KM + KG++ VRRD ++
Sbjct: 788 SSKFINPIKLEFEKVYFPYLLINKKRYAGLYWTRPDKYDKM----DTKGIETVRRDNCRM 843
Query: 870 ASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKA 929
+ V+ +IL +D + ++K +DL + ++ L ITK L+K
Sbjct: 844 VQTVIETVLRKIL---------IDRDVDGAQSYVKDTISDLLQNKIDMSKLVITKALSK- 893
Query: 930 PEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICED-GTSEAATQRAYNIEELKN 987
++YT ++A HV++A R+ ++ GD ++Y+I + G S+ + I L+N
Sbjct: 894 -KDYTAKQA--HVELAERMKKRDAGSAPTLGDRVAYVIVKGAGGSKNYEKSEDPIYVLEN 950
Query: 988 NSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
N + ID YYL Q+ +TR+ EPI G
Sbjct: 951 N--IPIDTKYYLDNQLAKPLTRIFEPILG 977
>gi|396485292|ref|XP_003842135.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
gi|312218711|emb|CBX98656.1| similar to catalytic subunit DNA polymerase delta [Leptosphaeria
maculans JN3]
Length = 1115
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 238/491 (48%), Gaps = 68/491 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N E R+T V N L L G+ R L + ++PD +G+ T +
Sbjct: 530 NYTEMARVTGVPFNYL---LARGQQVRFISQLFRKALDHQLIVPDL-----PNQGDSTDQ 581
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
Y G V+EPK+G+Y + + +DF SLYPSI+Q +N+C+TT
Sbjct: 582 -----------YEGATVIEPKRGYYKQPVATLDFASLYPSIMQAHNLCYTTWLDKQTVEK 630
Query: 668 VRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLM 722
++M +D D +T + + G+L +++L+ +R++ K A+ P + L
Sbjct: 631 LKMKKDEDYIVTPNGDMFCTAKTRKGLLTQILEELLGARKKAKRELAVETDPFKKAVL-- 688
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-------- 774
+ RQ ALK++ANS+YG G N + +A+ T+ GR+++ TK+ VE
Sbjct: 689 --NGRQLALKVSANSVYGLTGATNGKLPCLAIASSTTSFGRQMIEKTKAEVEAKYNIANG 746
Query: 775 -NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLL 832
+ + EVIYGDTDS+M+ ++ ++G + +K K ++L+ + VY LL+
Sbjct: 747 YSHDAEVIYGDTDSVMVKFGTSELAEAMRLGQEAADYVSSKFIKPIKLEFEKVYFPYLLI 806
Query: 833 KKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L +N + KG++ VRRD +L Q + E S +
Sbjct: 807 NKKRYAGLY---WTNPNKWDKMDTKGIETVRRDNCRLV---------QTVIETSLRMLLI 854
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEE-----YTDRKALPHVQVALR 947
D + E +K+ +DL + ++ L ITK LTK ++ Y +++A HV++A R
Sbjct: 855 DQDPEGAQEFVKETISDLLQNKIDMSNLVITKALTKQEDKEGKGGYANKQA--HVELAER 912
Query: 948 LNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHP 1005
+ ++ GD ++Y++ T +++ + I L+NN L ID YYL Q+
Sbjct: 913 MKKRDAGSAPGLGDRVAYVMVRAATGARNFEKSEDPIYVLENN--LPIDTRYYLDNQLAK 970
Query: 1006 VVTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 971 PLGRIFEPILG 981
>gi|4519584|dbj|BAA75663.1| DNA polymerase II [Aeropyrum pernix]
Length = 772
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 204/392 (52%), Gaps = 38/392 (9%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQDSDITT 678
R + Y+G +VL PK G ++ I ++DF S+YP+I+ +YN+ T+ P + ++ T
Sbjct: 384 RSEGRYAGAIVLRPKPGVHED-IAVLDFASMYPNIMVKYNVGPDTLVRPGEEYGEEEVYT 442
Query: 679 LCEYLPE-HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
E + + G +++ + RRQ+++ MK+ S D RQKA+KL AN+
Sbjct: 443 APEVGHKFRKSPPGFFKKILERFLSWRRQIRSEMKKHPPDSPEYKLLDERQKAIKLLANA 502
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
YG +G+P++R++ + A VTA GR I+ L EVIYGDTDSL + ND
Sbjct: 503 SYGYMGWPHARWYCRECAEAVTAWGRSIIRTAIRKAGELGLEVIYGDTDSLFVK---NDP 559
Query: 798 DSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQEI 856
+ V ++ ++ E ++ +D VY+ + + KK+Y L++ +GK+ ++
Sbjct: 560 EKVERLIRFVEEELG-----FDIKVDKVYRRVFFTEAKKRYVGLTV----DGKI----DV 606
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
G + VR DWS+LA E +F +++I+ + D ++ D ++NI E +++ + D+
Sbjct: 607 VGFEAVRGDWSELAKET-QFKVAEIVLKTGSVDEAV-DYVRNIIEKLRRGQVDMRK---- 660
Query: 917 LTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT 976
L I K LT+ P Y R+ PHV AL L K++ G I Y++ +
Sbjct: 661 ---LVIWKTLTRPPSMYEARQ--PHVTAAL-LMERAGIKVEPGAKIGYVVTKGSGPLYTR 714
Query: 977 QRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ Y + SK ++DV YY+ +Q+ P +
Sbjct: 715 AKPYFM-----ASKEEVDVEYYVDKQVVPAAS 741
>gi|2581900|gb|AAC47777.1| DNA polymerase alpha [Leishmania major]
Length = 307
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 121/186 (65%), Gaps = 14/186 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ K G + E + G
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQDFKRGHDDEEED---G 182
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 183 KRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRSEIDVPPPE 242
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 243 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDANNLAL-LEIRQKAL 301
Query: 732 KLTANS 737
KLTANS
Sbjct: 302 KLTANS 307
>gi|156093327|ref|XP_001612703.1| DNA polymerase delta catalytic subunit [Plasmodium vivax Sal-1]
gi|148801577|gb|EDL42976.1| DNA polymerase delta catalytic subunit, putative [Plasmodium vivax]
Length = 1096
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 232/437 (53%), Gaps = 49/437 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSDITTL- 679
Y G VLEP KG+Y + I +DF SLYPSI+ +N+C++T+ + L+ D+T++
Sbjct: 579 YEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLVKNNAEIEGLKQEDVTSIQ 638
Query: 680 ----CEYLPEHQVDTGILPSEIKKLVESRRQVKALMK-QPNLSSDLLMQYDIRQKALKLT 734
+++ + V GILP +++L+++R++VK L+K + N + +++ + RQ ALK++
Sbjct: 639 GKSNIKFV-KRSVKKGILPLIVEELIDARKKVKLLIKNEQNKITKMVL--NGRQLALKIS 695
Query: 735 ANSMYGCLGFPN-SRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGD 784
ANS+YG G + + +A +T GR ++ TK VE N V+YGD
Sbjct: 696 ANSVYGYTGAASGGQLPCLEVAVSITTLGRCMIDKTKETVEKYYSKSNGFEHNSTVVYGD 755
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ N+ +G +K + ++L+ + VY LLL KK+YA L +
Sbjct: 756 TDSVMVKFGTNNIAEAMALGKDAAQRISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYT 815
Query: 844 KL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ KM C KG++ VRRD+ L + + V++++L E++ LQ+ E+
Sbjct: 816 TPERHDKMDC----KGIETVRRDFCILIQQMMETVLNKLLIEKN---------LQSAIEY 862
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
K DL + ++LL +TK L K +Y R LPHV++A +L +S GD
Sbjct: 863 TKCKIKDLLTNNIDMSLLVVTKSLGKT--DYETR--LPHVELAKKLKQRDSATAPNVGDR 918
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI-EGTDA 1019
+SYII + +A +RA + + L NN L ID N+YL I ++R+ E I + +D+
Sbjct: 919 VSYIIVKGVKGQAQYERAEDPLYVLDNN--LAIDYNHYLD-AIKNTLSRIFEVIMQNSDS 975
Query: 1020 VRIAECLGLDTSLYRSQ 1036
+ E T L SQ
Sbjct: 976 LFCGEHTRHKTILTSSQ 992
>gi|367024855|ref|XP_003661712.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
gi|347008980|gb|AEO56467.1| hypothetical protein MYCTH_2301456 [Myceliophthora thermophila ATCC
42464]
Length = 1081
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 214/419 (51%), Gaps = 48/419 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---------PVRMLQDSDI 676
Y G V+EP + +YD I +DF SLYPSI+Q +N+C+TT+ ++ +D +
Sbjct: 578 YEGATVIEPIRNYYDVPIATLDFASLYPSIMQAHNLCYTTLIKKKDVEKWNLKKDEDYIV 637
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q K A P + L + RQ ALK+
Sbjct: 638 TPSGDMFVTTKQRKGLLAQILEELLAARKQAKRELAAETDPFKKAVL----NGRQLALKI 693
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G N + +A+ T GR+++ TK VE + + +VIYGD
Sbjct: 694 SANSVYGLTGATNGKLPCLEIASSTTGFGRQMIEKTKQEVEKRYTIANGYSHDAQVIYGD 753
Query: 785 TDSLMISCNVNDYDSVFKIG-NQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 754 TDSVMVKFGTTDLAEAMKLGEDASQYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWT 813
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ KM + KG++ VRRD LA + V+ IL +D + E+
Sbjct: 814 RPDRYDKM----DTKGIETVRRDNCLLAQTVIEKVLRMIL---------IDRDVSGAQEY 860
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K +DL + ++ L ITK LTK E+Y ++A HV++A R+ + GD
Sbjct: 861 VKDTISDLLQNKIDMSKLVITKALTK--EDYAAKQA--HVELAQRMKKRDPGSAPGLGDR 916
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
++Y++ + +R+ + + L++N + ID YYL Q+ +TR+ EPI G+++
Sbjct: 917 VAYVMVKGAAGSKNFERSEDPMYVLEHN--VPIDTKYYLDNQLAKPLTRIFEPILGSES 973
>gi|52696275|pdb|1WNS|A Chain A, Crystal Structure Of Family B Dna Polymerase From
Hyperthermophilic Archaeon Pyrococcus Kodakaraensis Kod1
Length = 774
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 218/438 (49%), Gaps = 55/438 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P+K ++KE R++ +Y GG V EP++G ++
Sbjct: 354 EWFLLRKAYERNELAPNKP---DEKE----------LARRRQSYEGGYVKEPERGLWEN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPQVGHRFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R+++K MK + LL D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 454 GDLLEERQKIKKKMKATIDPIERKLL---DYRQRAIKILANSYYGYYGYARARWYCKECA 510
Query: 756 ALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GRE I + K + E ++VIY DTD + D ++V K + N K
Sbjct: 511 ESVTAWGREYITMTIKEIEEKYGFKVIYSDTDGFFATIPGADAETVKKKAMEFLKYINAK 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G YK + KKKYA + GK+ +G+++VRRDWS++A E
Sbjct: 571 LPGALELEYEGFYKRGFFVTKKKYAVID----EEGKITT----RGLEIVRRDWSEIAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ +L D ++ +K++ L VP L I +Q+T+ ++Y
Sbjct: 623 QARVLEALLK---------DGDVEKAVRIVKEVTEKLSKYEVPPEKLVIHEQITRDLKDY 673
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
+ PHV VA RL K++ G ISYI+ + S RA +E + +K K
Sbjct: 674 --KATGPHVAVAKRL-AARGVKIRPGTVISYIVLKG--SGRIGDRAIPFDEF-DPTKHKY 727
Query: 994 DVNYYLSQQIHPVVTRLL 1011
D YY+ Q+ P V R+L
Sbjct: 728 DAEYYIENQVLPAVERIL 745
>gi|159463358|ref|XP_001689909.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
gi|158283897|gb|EDP09647.1| DNA polymerase delta subunit one [Chlamydomonas reinhardtii]
Length = 1091
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 241/482 (50%), Gaps = 58/482 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V LS L G+S + LL K +V+P+ K +G G
Sbjct: 514 NYIEMARVTGV---PLSYLLTRGQSIKVFSQLLRKAAAKGFVIPNI-----KVQGPVAGA 565
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR----- 669
G Y G VL+PK GFYD+ + +DF SLYPSI+ +N+C+TT+ +
Sbjct: 566 DGVG-------YEGATVLDPKIGFYDRPVATLDFASLYPSIMMAHNLCYTTLLTKDQLNI 618
Query: 670 -MLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYD 725
+D + + ++ + G+LP +++L+ +R++ K +K P + L D
Sbjct: 619 VPPEDREQSPSGDWFVRNSRQRGLLPEILEELLAARKRAKNDLKAEKDPFKRAVL----D 674
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NL 776
RQ ALK++ANS+YG G + ++A T+ GRE+++ T+ LV+
Sbjct: 675 GRQLALKVSANSVYGFTGATVGKMPCLAISASTTSYGREMIMTTRQLVQEHYTRANGYET 734
Query: 777 NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKK 835
+ EVIYGDTDS+M++ V D ++G + + +K + ++L+ + VY LL+ KK
Sbjct: 735 DCEVIYGDTDSVMVNFKVADVARAMELGREAAAVVSKAFPPPVKLEFEKVYYPYLLMNKK 794
Query: 836 KYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
+YA L ++ ++ KM + KG++ VRRD L + +IL +
Sbjct: 795 RYAGLLWTRPETHDKM----DSKGIETVRRDNCLLVRNVVTTCLERIL---------IGK 841
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
+Q ++K + DL + L+LL I+K LT+ +EY + A HV++A ++ +
Sbjct: 842 DVQGAVGYVKGVIADLLMNKIDLSLLVISKGLTQDADEYEGKIA--HVELAKKMRKRDPA 899
Query: 955 KLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD + Y+I + A ++A + I L+++ L IDV +YL + + R+ E
Sbjct: 900 TAPAVGDRVPYVIIKAAKGAKAWEKAEDPIYALEHS--LPIDVQHYLEHHLSQPLLRIFE 957
Query: 1013 PI 1014
P+
Sbjct: 958 PV 959
>gi|405119357|gb|AFR94130.1| delta DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 1059
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 252/537 (46%), Gaps = 85/537 (15%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSDI-- 676
Y G V+EP KGFYD I +DF SLYPSI+ +N+C+TT+ +++++ D
Sbjct: 537 YEGATVIEPSKGFYDVPITTLDFASLYPSIMMAHNLCYTTLLDRGTIERLKLVEGEDYVH 596
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T ++ + G+LP ++ L+ +R++ K + K P + L D RQ ALK+
Sbjct: 597 TPNNDFFATSKRRKGLLPHILENLLAARKRAKQDLKIEKDPFKRAVL----DGRQLALKV 652
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +++ VTA GR+++ TK VE + + +V+YGD
Sbjct: 653 SANSVYGFTGATIGKLPCLAISSSVTAYGRQMIELTKKEVEAEYSMKNGYDHDAKVVYGD 712
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D + ++G + + K K ++L+ + VY LL+ KK+YA L +
Sbjct: 713 TDSVMVRFGCPDLPTAMRLGAEAADLVSGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWT 772
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ KM + KG++ VRRD +L S + + ++L +D ++ ++
Sbjct: 773 RPEKYDKM----DTKGIETVRRDNCRLVSTVIETCLFKML---------IDRDVKGAEDY 819
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K DL + ++ L ITK L KA +Y ++A HV++ R+ ++ GD
Sbjct: 820 VKDTIADLLQNKIDMSQLVITKALAKA--DYAAKQA--HVELVERMRKRDAGSAPSLGDR 875
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y+I + AA +++ + + L++N + ID YYL Q+ + R+ EPI G A
Sbjct: 876 VAYVIVKGVKGAAAYEKSEDPLYVLEHN--VPIDTRYYLENQLSKPLMRIFEPILGEKA- 932
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTV 1080
SL +IQ + I G+ +F K TCM CK
Sbjct: 933 ---------NSLLHGDHTRTIQIATPTIGGL-------MKFAVK-TVTCMG--CK----- 968
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCE 1137
P R V C+N K LP L K + + + W +C+
Sbjct: 969 -TPLRGKNESAV-----CVNCRPK------LPELYQKQVAQTSALQIDFARLWTQCQ 1013
>gi|393226323|gb|EJD34100.1| putative delta DNA polymerase [Auricularia delicata TFB-10046 SS5]
Length = 961
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 217/424 (51%), Gaps = 58/424 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSDI-- 676
Y G V+ P G+Y I +DF+S+YPSI+ +NIC+TT+ +R++ D D
Sbjct: 439 YEGATVIPPTTGYYKDPIATLDFSSMYPSIMIAHNICYTTMINRATISRLRLVLDVDYKQ 498
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLT 734
T + G+LP ++ L+ +R++VKA +K +D + D RQ ALK++
Sbjct: 499 TPQGTFFVNPTRRKGVLPIILEHLLSARKRVKADLKN---ETDPFKRAVLDGRQLALKIS 555
Query: 735 ANSMYGCLGFPNSRFFAQP---LAALVTAKGREILLNTKSLVEN---------LNYEVIY 782
ANS+Y GFP + F P +++ TA GRE++ TKS+VE+ + VIY
Sbjct: 556 ANSVY---GFPGASFGHLPCTDISSTTTAYGREMIAKTKSVVEDHYRIENGFEHDARVIY 612
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAALS 841
GDTDS+M+ +D + ++G + + ++L+ + VY LL+ KK+YA L
Sbjct: 613 GDTDSVMVDFGPSDVATCMRLGAEAAHLVTTHFVDPVKLEFEKVYWPYLLVNKKRYAGLY 672
Query: 842 ISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHE 901
+K + + KG++ VRRD LASE V++++L E+ +
Sbjct: 673 WTKPDKYDKL---DAKGLESVRRDNCCLASETMDKVLNKMLVERD---------PEGALA 720
Query: 902 HMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GD 960
++KKI +L + L+ L ITK L K +Y ++ PHV+ A R+ ++ GD
Sbjct: 721 YVKKIVNNLLQDRIDLSQLVITKTLAKM--DYVSKQ--PHVESARRMKKRDAGSAPGIGD 776
Query: 961 TISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIE 1015
++Y+I GT A R Y+ E L++N + ID YYL+ Q+ + R+ EP+
Sbjct: 777 RVAYVIVR-GTKNA---RVYDRAEDPSYVLEHN--IPIDTEYYLNNQLATPLMRIFEPVL 830
Query: 1016 GTDA 1019
G A
Sbjct: 831 GARA 834
>gi|297527543|ref|YP_003669567.1| DNA polymerase Pol2 [Staphylothermus hellenicus DSM 12710]
gi|297256459|gb|ADI32668.1| DNA polymerase Pol2 [Staphylothermus hellenicus DSM 12710]
Length = 801
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 202/398 (50%), Gaps = 42/398 (10%)
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
GR +Y G +VL+P KG ++ I ++DF+S+YP+I+ +YN+ TI D +
Sbjct: 410 GRAAESYRGAVVLKPVKGVHEN-IAVLDFSSMYPNIMIKYNVGPDTIIRNEKCDPRKHNI 468
Query: 680 CEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
PE + G ++ L+ R+Q+K+ MK+ +S D RQKA+K+
Sbjct: 469 A---PEVGHCFRKEPPGFFKKVLETLLSLRKQIKSEMKKYPPTSYEYRLLDERQKAVKVL 525
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
AN+ YG +G+ ++R++ + A VTA GR+ + + L L +VIYGDTDSL ++
Sbjct: 526 ANATYGYMGWVHARWYCRECAEAVTAWGRQTIKSAIELARKLGLKVIYGDTDSLFVTY-- 583
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICS 853
D D V K+ + I+++ E+ ID +YK + + KK+YA L L +G++
Sbjct: 584 -DKDRVEKLIDLIQTKLG-----FEIKIDKIYKRVFFTEAKKRYAGL----LEDGRI--- 630
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
+I G + VR DW+ +A E + V +L E S + E+++K+ DL G
Sbjct: 631 -DIVGFEAVRGDWADIAKEVQEKVTEILLKENS---------VDKAIEYVRKVIADLKAG 680
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
+PL L I K L+K EEY+ PHV A +L K+ D I Y+I + G
Sbjct: 681 KIPLDKLIIWKTLSKRIEEYS--VDAPHVVAAKKLVKAGI-KISVNDKIGYVILKGGGKI 737
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
++ Y + KL ID YY+ QI P R+L
Sbjct: 738 SSRAEPYI---FVKDPKL-IDTEYYIDHQIVPAALRIL 771
>gi|46125595|ref|XP_387351.1| hypothetical protein FG07175.1 [Gibberella zeae PH-1]
Length = 1104
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 213/421 (50%), Gaps = 48/421 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQDSDITTLCEYLP 684
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT + + ++ ++ +Y+
Sbjct: 577 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVSKKAIEAFNLQKDEDYIV 636
Query: 685 EHQVDT--------GILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
DT G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 637 TPNGDTFVTIKQRKGLLAQILEELLSARKQAKRELAVETDPFKKAVL----NGRQLALKI 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK VE + +VIYGD
Sbjct: 693 SANSVYGLTGATTGKLPCLEIASSTTSFGRKMIEKTKEEVEGRYNIANGYSHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQI-KSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+MI D K+G + K +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 753 TDSVMIKFGTKDLQEAMKLGEEASKYVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWT 812
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D + E+
Sbjct: 813 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVPGAQEY 859
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K+ DL V ++ L ITK LTK ++Y ++A HV++A R+ ++ GD
Sbjct: 860 VKETIADLLQNKVDMSKLVITKALTK--DDYAAKQA--HVELAQRMKKRDAGSAPGLGDR 915
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y++ +++ + I L++N + ID YYL Q+ + R+ EPI G
Sbjct: 916 VAYVMIRGPAGAKNFEKSEDPIYVLEHN--VPIDTRYYLDNQLAKPLGRIFEPILGETKA 973
Query: 1021 R 1021
R
Sbjct: 974 R 974
>gi|389634743|ref|XP_003715024.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|351647357|gb|EHA55217.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae 70-15]
gi|440470521|gb|ELQ39588.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae Y34]
gi|440488502|gb|ELQ68227.1| DNA polymerase delta catalytic subunit [Magnaporthe oryzae P131]
Length = 1103
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 216/416 (51%), Gaps = 48/416 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR-------MLQDSD--I 676
Y G V+EP +G+YD + +DF SLYPSI+Q +N+C+TT+ + + +D D +
Sbjct: 576 YEGATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLVTKKAIDAFGLKKDEDYIV 635
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T ++ + G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 636 TPNGDFFVTIKQRKGLLAQILEELLAARKQAKRELAVETDPFKKAVL----NGRQLALKI 691
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGD 784
+ANS+YG G N + +A+ T+ GR+++ TK VE + +VIYGD
Sbjct: 692 SANSVYGLTGATNGKLPCLEIASSTTSFGRQMIEKTKEEVEKKYRVANGYSHDAQVIYGD 751
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 752 TDSVMVKFGTKDLAEAMKLGEEAANYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWT 811
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D + E+
Sbjct: 812 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVPGAQEY 858
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K+ +L V ++ L ITK LTK ++Y+ ++A HV++A R+ ++ GD
Sbjct: 859 VKETIAELLQNKVDMSKLVITKALTK--DDYSAKQA--HVELAQRMKKRDAGSAPGLGDR 914
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
++Y++ + T +R+ + I L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 915 VAYVMIKGATGSKNFERSEDPIYVLENN--VPIDTKYYLDNQLAKPLGRIFEPILG 968
>gi|330921129|ref|XP_003299297.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
gi|311327099|gb|EFQ92613.1| hypothetical protein PTT_10256 [Pyrenophora teres f. teres 0-1]
Length = 1115
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 214/427 (50%), Gaps = 49/427 (11%)
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRML 671
+G Y G V+EPK+G+Y + +DF SLYPSI+Q +N+C+TT ++M
Sbjct: 575 QGDSSDQYEGATVIEPKRGYYRDPVATLDFASLYPSIMQAHNLCYTTWLDKQTVEKLKMK 634
Query: 672 QDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDI 726
+D D +T + + G+L +++++ +R++ K A P + L +
Sbjct: 635 KDEDYIVTPHGDMFCTAKTRKGLLTEILEEVLSARKKAKRELATETDPFKKAVL----NG 690
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLN 777
RQ ALK+TANS+YG G N + +A+ T+ GR+++ TK+ VE +
Sbjct: 691 RQLALKVTANSVYGLTGATNGKLPCLAIASSTTSFGRQMIERTKAEVEAKYNIANGYTHD 750
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
EVIYGDTDS+M+ ++ + K+G + + +K K ++L+ + VY LL+ KK+
Sbjct: 751 AEVIYGDTDSVMVKFGTSNLEEAMKLGEEAATYVTSKFLKPIKLEFEKVYFPYLLINKKR 810
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YA L +N + KG++ VRRD +L Q + E S +D
Sbjct: 811 YAGLY---WTNPHKWDKMDTKGIETVRRDNCRLV---------QTVIETSLRMLLIDQDP 858
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEE-----YTDRKALPHVQVALRLNNT 951
+ +K+ DL V ++ L ITK LTK ++ Y +++A HV++A R+
Sbjct: 859 EGAQAFVKETIADLLQNKVDMSNLVITKALTKQEDKDGKGGYANKQA--HVELAERMKKR 916
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ GD ++Y++ T +++ + + L+NN L ID YYL Q+ + R
Sbjct: 917 DAGSAPALGDRVAYVMIRAATGAKNFEKSEDPLYVLENN--LPIDTRYYLDNQLAKPLGR 974
Query: 1010 LLEPIEG 1016
+ EPI G
Sbjct: 975 IFEPILG 981
>gi|189207907|ref|XP_001940287.1| DNA polymerase delta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976380|gb|EDU43006.1| DNA polymerase delta catalytic subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1115
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 214/427 (50%), Gaps = 49/427 (11%)
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRML 671
+G Y G V+EPK+G+Y + +DF SLYPSI+Q +N+C+TT ++M
Sbjct: 575 QGDSNDQYEGATVIEPKRGYYRDPVATLDFASLYPSIMQAHNLCYTTWLDKQTVEKLKMK 634
Query: 672 QDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDI 726
+D D +T + + G+L +++++ +R++ K A P + L +
Sbjct: 635 KDEDYIVTPHGDMFCTAKTRKGLLTEILEEVLSARKKAKRELATETDPFKKAVL----NG 690
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLN 777
RQ ALK+TANS+YG G N + +A+ T+ GR+++ TK+ VE +
Sbjct: 691 RQLALKVTANSVYGLTGATNGKLPCLAIASSTTSFGRQMIERTKAEVEAKYNIANGYTHD 750
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKK 836
EVIYGDTDS+M+ ++ + K+G + + +K K ++L+ + VY LL+ KK+
Sbjct: 751 AEVIYGDTDSVMVKFGTSNLEEAMKLGEEAATYVTSKFLKPIKLEFEKVYFPYLLINKKR 810
Query: 837 YAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
YA L +N + KG++ VRRD +L Q + E S +D
Sbjct: 811 YAGLY---WTNPHKWDKMDTKGIETVRRDNCRLV---------QTVIETSLRMLLIDQDP 858
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEE-----YTDRKALPHVQVALRLNNT 951
+ +K+ DL V ++ L ITK LTK ++ Y +++A HV++A R+
Sbjct: 859 EGAQAFVKETIADLLQNKVDMSNLVITKALTKQEDKDGKGGYANKQA--HVELAERMKKR 916
Query: 952 NSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTR 1009
++ GD ++Y++ T +++ + + L+NN L ID YYL Q+ + R
Sbjct: 917 DAGSAPALGDRVAYVMIRAATGAKNFEKSEDPLYVLENN--LPIDTRYYLDNQLAKPLGR 974
Query: 1010 LLEPIEG 1016
+ EPI G
Sbjct: 975 IFEPILG 981
>gi|321264115|ref|XP_003196775.1| delta DNA polymerase [Cryptococcus gattii WM276]
gi|317463252|gb|ADV24988.1| Delta DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 1049
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 252/537 (46%), Gaps = 85/537 (15%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSDI-- 676
Y G V+EP KGFYD I +DF SLYPSI+ +N+C+TT+ +++++ D
Sbjct: 527 YEGATVIEPSKGFYDVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERLKLVEGQDYVH 586
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKA---LMKQPNLSSDLLMQYDIRQKALKL 733
T ++ + G+LP ++ L+ +R++ K + K P + L D RQ ALK+
Sbjct: 587 TPNNDFFATSKRRKGLLPHILENLLAARKRAKQDLKVEKDPFKRAVL----DGRQLALKV 642
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +++ VTA GR+++ TK VE + + +V+YGD
Sbjct: 643 SANSVYGFTGATVGKLPCLAISSSVTAYGRQMIELTKKEVEAQYSMKNGYDHDAKVVYGD 702
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D + ++G + + K K ++L+ + VY LL+ KK+YA L +
Sbjct: 703 TDSVMVRFGCPDLPTAMRLGAEAADLVSGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWT 762
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ KM + KG++ VRRD +L S + + ++L +D ++ ++
Sbjct: 763 RPEKYDKM----DTKGIETVRRDNCRLVSTVIETCLFKML---------IDRDVKGAEDY 809
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K DL + ++ L ITK L KA +Y ++A HV++ R+ ++ GD
Sbjct: 810 VKDTIADLLQNKIDMSQLVITKALAKA--DYAAKQA--HVELVERMRKRDAGSAPSLGDR 865
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y+I + AA +++ + + L++N + ID YYL Q+ + R+ EPI G A
Sbjct: 866 VAYVIVKGVKGAAAYEKSEDPLYVLEHN--VPIDTRYYLENQLSKPLMRIFEPILGEKA- 922
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTV 1080
SL +IQ + I G+ +F K TCM CK
Sbjct: 923 ---------NSLLHGDHTRTIQIATPTIGGL-------MKFAVK-TVTCMG--CK----- 958
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCE 1137
P R V C+N K LP L K + + + W +C+
Sbjct: 959 -TPLRGKNESAV-----CVNCRPK------LPELYQKQVAQTSALQIDFARLWTQCQ 1003
>gi|281210761|gb|EFA84927.1| DNA polymerase delta catalytic subunit [Polysphondylium pallidum
PN500]
Length = 1999
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 212/422 (50%), Gaps = 54/422 (12%)
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP----VRMLQD 673
GKG K + G +V+EP GFYD I +DF SLYPSI+ +N+C++T+ ++ L +
Sbjct: 1090 GKGDK---FKGAVVIEPTPGFYDTPIATLDFTSLYPSIMMAHNLCYSTLITQDYIKTLPN 1146
Query: 674 SDITTLCE----YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIR 727
++ T LP + G+LP +++L+ +R++ K +K + +D + D R
Sbjct: 1147 TEYTVTPSGDAFILP--NIKKGLLPRILEELLTARKKAKEELK---VETDPFKKAVLDGR 1201
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNY 778
Q ALK++ANS+YG G + ++ VTA GRE+L T+ VE + +
Sbjct: 1202 QLALKISANSVYGFTGARVGKLPCIEISRSVTAFGREMLYKTRDFVEAKYTIANGYSHDA 1261
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKY 837
++IYGDTDS+M+ V+ + +G E K++ + + LD + VY LL+ KKKY
Sbjct: 1262 KIIYGDTDSVMVKFGVSTVEEAMDLGRHASKEVTKIFIRPINLDFEKVYYPYLLMAKKKY 1321
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
A L +K ++KG++ +RRD L ++ IL +D ++
Sbjct: 1322 AGLFWTKPDK---FDKMDVKGLENIRRDTCLLVRNVVSNILKMIL---------IDKDIK 1369
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
E+ K + +DL + L++L ITK L+K+ EY R H ++A ++ N
Sbjct: 1370 KAEEYTKSVISDLLQNRLDLSMLVITKALSKS--EYKGRVI--HNELAQKMRARNPATAP 1425
Query: 958 Q-GDTISYIICEDGTSEAATQRA----YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
GD + Y+I + + ++A Y +E+ L +D YY +Q+ + R+ E
Sbjct: 1426 NLGDRVPYVITQGIKNAPIYEKAEDPLYVLEK-----NLLLDTKYYCDKQLKAPLLRIFE 1480
Query: 1013 PI 1014
P+
Sbjct: 1481 PL 1482
>gi|2581874|gb|AAC47764.1| DNA polymerase alpha [Leishmania aethiopica]
gi|2581878|gb|AAC47766.1| DNA polymerase alpha [Leishmania arabica]
gi|2581908|gb|AAC47781.1| DNA polymerase alpha [Leishmania tropica]
Length = 307
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 121/186 (65%), Gaps = 14/186 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ K G + E + G
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQDFKRGHDDEEED---G 182
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++KA Y GG+VL+PK G Y +I+L+DFNSLYPS++QE+NICFTT+ + D+
Sbjct: 183 KRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLMQEFNICFTTVDRENRSEIDVPPPE 242
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK +++L + +IRQKAL
Sbjct: 243 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDANNLAL-LEIRQKAL 301
Query: 732 KLTANS 737
KLTANS
Sbjct: 302 KLTANS 307
>gi|2581872|gb|AAC47763.1| DNA polymerase alpha [Leishmania adleri]
gi|2581896|gb|AAC47775.1| DNA polymerase alpha [Leishmania hoogstraali]
gi|2581906|gb|AAC47780.1| DNA polymerase alpha [Leishmania tarentolae]
Length = 308
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 13/186 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ + G + E GK
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YVQDFRRGRDDDEEEDGK- 184
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++A Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 185 -RRAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRNEIDVPPPE 243
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK ++ L + +IRQKAL
Sbjct: 244 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDANSLAL-LEIRQKAL 302
Query: 732 KLTANS 737
KLTANS
Sbjct: 303 KLTANS 308
>gi|408397517|gb|EKJ76659.1| hypothetical protein FPSE_03209 [Fusarium pseudograminearum CS3096]
Length = 1104
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 212/421 (50%), Gaps = 48/421 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQDSDITTLCEYLP 684
Y G V+EP +G+YD I +DF SLYPSI+Q +N+C+TT + + ++ ++ +Y+
Sbjct: 577 YEGATVIEPTRGYYDVPIATLDFASLYPSIMQAHNLCYTTLVSKKAIEAFNLQKDEDYIV 636
Query: 685 EHQVDT--------GILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
DT G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 637 TPNGDTFVTIKQRKGLLAQILEELLSARKQAKRELAVETDPFKKAVL----NGRQLALKI 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK VE + +VIYGD
Sbjct: 693 SANSVYGLTGATTGKLPCLEIASSTTSFGRKMIEKTKEEVEGRYNIANGYSHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQI-KSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+MI D ++G + K K K ++L+ + VY LL+ KK+YA L +
Sbjct: 753 TDSVMIKFGTKDLQEAMRLGEEASKYVSEKFVKPIKLEFEKVYFPYLLINKKRYAGLYWT 812
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K KM + KG++ VRRD L + V+ IL +D + E+
Sbjct: 813 KPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDQDVPGAQEY 859
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K+ DL V ++ L ITK LTK ++Y ++A HV++A R+ ++ GD
Sbjct: 860 VKETIADLLQNKVDMSKLVITKALTK--DDYAAKQA--HVELAQRMKKRDAGSAPGLGDR 915
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y++ +++ + I L++N + ID YYL Q+ + R+ EPI G
Sbjct: 916 VAYVMIRGPAGAKNFEKSEDPIYVLEHN--VPIDTRYYLDNQLAKPLGRIFEPILGETKA 973
Query: 1021 R 1021
R
Sbjct: 974 R 974
>gi|2581890|gb|AAC47772.1| DNA polymerase alpha [Leishmania gymnodactyli]
Length = 308
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 13/186 (6%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL G RSER E+LLLH FH+ ++ PD+ Y ++ + G + E GK
Sbjct: 127 RLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDR-YLQDFRRGRDDDEEEDGK- 184
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++A Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 185 -RRAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRNEIDVPPPE 243
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK ++ L + +IRQKAL
Sbjct: 244 NLICASCAAAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDANSLAL-LEIRQKAL 302
Query: 732 KLTANS 737
KLTANS
Sbjct: 303 KLTANS 308
>gi|324120750|dbj|BAJ78766.1| DNA polymerase delta catalytic subunit [Protohermes grandis]
Length = 1046
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 241/490 (49%), Gaps = 73/490 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEF---LLLHAFHEKSYVLPDKQYGKNKKEGEE 611
N ME R++ V + T + R E+ + LL HA H Y++P ++++
Sbjct: 471 NDMELARVSGV-----TITTLLTRGEQVKVVTQLLSHARHA-GYLMPVHHVQASEEQ--- 521
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVR 669
Y G V+EPKK +Y I +DF+SLYPSI+ +N+C+TT+ P
Sbjct: 522 --------------YEGATVIEPKKDYYTLPIATLDFSSLYPSIMMAHNLCYTTLVQPYI 567
Query: 670 M----LQDSDITTL--CEYLPEHQVDTGILPSEIKKLVESRRQVK-ALMKQPNLSSDLLM 722
+ L++ DIT Y + V G+LP ++ L+++R++ K L + + S ++
Sbjct: 568 IDKLGLKEEDITKTPKGNYFVKSSVRCGLLPEILENLLKARKRAKNELAAETDPSKKAVL 627
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------ 776
+ RQ ALK++ANS+YG G + ++ VT+ GRE++ T+ VE
Sbjct: 628 --NGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTSYGREMIELTRKEVEERFTLKNG 685
Query: 777 ---NYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLL 832
+ +V+YGDTDS+M+ V + K+G + + K K ++L+ + VY LL+
Sbjct: 686 YLHDAQVVYGDTDSVMVKFGVEEIAESMKLGREAAEFVSAKFIKPIKLEFEKVYCPYLLI 745
Query: 833 KKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYT 888
KK+YA L ++ KM C KG++ VRRD S L + + ++L D +
Sbjct: 746 NKKRYAGLYYTRPDKYDKMDC----KGLETVRRDNSPLVANTINICLQKLLIHKDPEGAI 801
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
Y+ K++ +DL + ++ L I+K+LTK Y ++A HV++A +L
Sbjct: 802 KYT------------KQVISDLLCNRIDISQLVISKELTKGEGAYAAKQA--HVELAKKL 847
Query: 949 NNTNSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
+ K GD + Y++ + A +A + I L+NN + ID YYL Q+
Sbjct: 848 TKRDPGNAPKMGDRVPYVLIAATKNTPAYAKAEDPIYVLENN--IPIDAKYYLENQLSKP 905
Query: 1007 VTRLLEPIEG 1016
+ R+ +PI G
Sbjct: 906 LVRIFQPILG 915
>gi|116199119|ref|XP_001225371.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178994|gb|EAQ86462.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1104
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 213/419 (50%), Gaps = 48/419 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---------PVRMLQDSDI 676
Y G V++P K +YD I +DF SLYPSI+Q +N+C+TT+ ++ +D +
Sbjct: 576 YEGATVIDPIKNYYDVPIATLDFASLYPSIMQAHNLCYTTLIKKKDIERWNLKKDEDYIV 635
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q K A P + L + RQ ALK+
Sbjct: 636 TPSGDMFVTSKQRKGLLAQILEELLSARKQAKRELAAETDPFKKAVL----NGRQLALKI 691
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGD 784
+ANS+YG G N + +A+ T+ GR+++ TK VEN + +VIYGD
Sbjct: 692 SANSVYGLTGATNGKLPCLEIASSTTSFGRQMIERTKQEVENRYNIANGYSHDAQVIYGD 751
Query: 785 TDSLMISCNVNDYDSVFKIG-NQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D ++G + + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 752 TDSVMVKFGTTDLAEAMRLGEDASQFVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWT 811
Query: 844 KL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
K + KM + KG++ VRRD L + V+ IL +D + E+
Sbjct: 812 KPEKHDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDRDVMGAQEY 858
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K DL + ++ L ITK LTK ++Y ++A HV++A R+ + GD
Sbjct: 859 VKDTIADLLQNKIDMSKLVITKALTK--DDYAAKQA--HVELAQRMRKRDPGSAPGLGDR 914
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
++Y++ + +R+ + + L++N + ID YYL Q+ + R+ EPI G++A
Sbjct: 915 VAYVMVKGAAGSKNFERSEDPMYVLEHN--VPIDTKYYLDNQLAKPLGRIFEPILGSEA 971
>gi|390939096|ref|YP_006402834.1| DNA polymerase Pol2 [Desulfurococcus fermentans DSM 16532]
gi|390192203|gb|AFL67259.1| DNA polymerase Pol2 [Desulfurococcus fermentans DSM 16532]
Length = 797
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 227/478 (47%), Gaps = 66/478 (13%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++++++ G L + R E+ L+ + ++P++ +KE E
Sbjct: 365 MQLSSITGLPLDQVGAASVGNRLEWFLMREAFRRDELIPNRI----EKEAE--------- 411
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
Y G +VL+P G ++ I ++DF S+YP+I+ +YNI TI +R I +
Sbjct: 412 -----PYKGAVVLQPLPGIHEN-IAVLDFTSMYPNIMIKYNIGPDTI-IR----EGICSE 460
Query: 680 CEYLPEHQVD-------TGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
E+ +V G ++ L+ R+Q++ MK+ S D RQKA+K
Sbjct: 461 SEHYVAPEVKHCFLREPPGFFKGVLQTLLSLRKQIRGEMKKYKTDSPEYRLLDERQKAIK 520
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
+ AN+ YG +G+ +R++ + A VTA GR+ +L+ + +VIYGDTDSL +
Sbjct: 521 VLANATYGYMGWVAARWYCKECAEAVTAWGRKTILSVIDYARVIGLKVIYGDTDSLFVE- 579
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMI 851
N D + ++ ++ E E+ ID VYK + + KK+YA L L +G++
Sbjct: 580 --NIPDKITRLSEYVERELG-----FEIKIDKVYKRVFFTEAKKRYAGL----LEDGRV- 627
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
+I G + VR DW+++A E + V +L E++ ++ E+++ +L+
Sbjct: 628 ---DIVGFEAVRGDWAEIAKEVQEKVTEILLSEKN---------IEKAIEYVRNTIAELN 675
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
G +PL L I K LTK+ EEY PHV A ++ K++ GD I YI+ +
Sbjct: 676 QGRIPLEKLIIWKTLTKSIEEY--EAEAPHVNAARKMKRMGM-KIEVGDKIGYIVVKGSG 732
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV--RIAECLG 1027
+ Y + KL +D YY+ QI P R+LE TD R+A G
Sbjct: 733 KISDRAEPYM---FVKDPKL-VDTIYYIDHQIIPAALRILEYFGVTDTQLKRVASTAG 786
>gi|73535447|pdb|1WN7|A Chain A, Crystal Structure Of Archaeal Family B Dna Polymerase Mutant
Length = 774
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 215/438 (49%), Gaps = 55/438 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P+K K R++ +Y GG V EP++G ++
Sbjct: 354 EWFLLRKAYERNELAPNKP-------------DEKELARRRQSYEGGYVKEPERGLWEN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPQVGHRFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R+++K MK + LL D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 454 GDLLEERQKIKKKMKATIDPIERKLL---DYRQRAIKILANSYYGYYGYARARWYCKECA 510
Query: 756 ALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GRE I + K + E ++VIY DTD + D ++V K + N K
Sbjct: 511 ESVTAWGREYITMTIKEIEEKYGFKVIYSDTDGFFATIPGADAETVKKKAMEFLKYINAK 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G Y+ + KKKYA + GK+ +G+++VRRDWS++A E
Sbjct: 571 LPGALELEYEGFYERGFFVTKKKYAVID----EEGKITT----RGLEIVRRDWSEIAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ +L D ++ +K++ L VP L I +Q+T+ ++Y
Sbjct: 623 QARVLEALLK---------DGDVEKAVRIVKEVTEKLSKYEVPPEKLVIHEQITRDLKDY 673
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
+ PHV VA RL K++ G ISYI+ + S RA +E + +K K
Sbjct: 674 --KATGPHVAVAKRL-AARGVKIRPGTVISYIVLKG--SGRIGDRAIPFDEF-DPTKHKY 727
Query: 994 DVNYYLSQQIHPVVTRLL 1011
D YY+ Q+ P V R+L
Sbjct: 728 DAEYYIENQVLPAVERIL 745
>gi|307595059|ref|YP_003901376.1| DNA polymerase Pol2 [Vulcanisaeta distributa DSM 14429]
gi|307550260|gb|ADN50325.1| DNA polymerase Pol2 [Vulcanisaeta distributa DSM 14429]
Length = 784
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 209/403 (51%), Gaps = 54/403 (13%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R Y G +VLEP+ G ++ I ++DF+S+YPSI+ +YN+ T+ + D C
Sbjct: 402 RPYETYKGAVVLEPRPGLHEN-IAVIDFSSMYPSIMMKYNVSPDTLVLGDCGD------C 454
Query: 681 EYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
PE + G+ P ++ LVESRR+V+ LMK+ +S + + RQ+ALK+ A
Sbjct: 455 YVAPEVNYKFRRSPEGLYPGLLRILVESRRRVRDLMKKYPENSPEWVLLNERQRALKVMA 514
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
N+MYG G+ +R++ + +A VTA GR +L +L +IYGDTDSL + N
Sbjct: 515 NAMYGYCGWLGARWYRREVAEAVTAWGRNLLRTVIEKARSLGLPIIYGDTDSLFVR---N 571
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQ 854
D V + N + +E E+ +D VY+ +L + KK+Y L++
Sbjct: 572 ISDKVDALINYVNNELG-----FEVKVDKVYRRVLFTEAKKRYVGLTVE--------GEV 618
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQIL---DEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
+I G + VR DW+++A + + V +L D Y ++++ + +K + D+D
Sbjct: 619 DIVGFEAVRGDWAEIAKDVQENVAEIVLTTGDVGKAISY-----VKSVIDKVKAYQFDID 673
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
+ + I K L K+ EY + PHV A +L K+ +GD I Y++ + G
Sbjct: 674 D-------VIIWKTLDKSLNEY--KVLTPHVAAAKQLVEAGY-KVGKGDMIGYVVVKGGG 723
Query: 972 SEAATQ-RAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
++ A + + Y I++++ ++DV+YY+ +QI P R+LE
Sbjct: 724 AKLAYKVKPYILIKDIR-----EVDVDYYVEKQIVPAAMRILE 761
>gi|218884606|ref|YP_002428988.1| DNA polymerase II [Desulfurococcus kamchatkensis 1221n]
gi|218766222|gb|ACL11621.1| DNA polymerase [Desulfurococcus kamchatkensis 1221n]
Length = 797
Score = 155 bits (393), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 202/400 (50%), Gaps = 44/400 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR--MLQDSDITTLCE-- 681
Y G +VL+P G ++ I ++DF S+YP+I+ +YNI TI +R + ++S+ E
Sbjct: 413 YKGAVVLQPLPGIHEN-IAVLDFTSMYPNIMIKYNIGPDTI-IREGVCRESEHYVAPEVK 470
Query: 682 --YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+L E G ++ L+ R+Q++ MK+ S D RQKA+K+ AN+ Y
Sbjct: 471 HCFLRE---PPGFFKGVLQILLSLRKQIRGEMKKYKTDSPEYRLLDERQKAIKVLANATY 527
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
G +G+ +R++ + A VTA GR +L+ + +VIYGDTDSL + N D
Sbjct: 528 GYMGWVAARWYCKECAEAVTAWGRRTILSVIDYARVIGLKVIYGDTDSLFVE---NIPDK 584
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQEIKG 858
+ ++ ++ E E+ ID VYK + + KK+YA L L +G++ +I G
Sbjct: 585 ITRLSEYVERELG-----FEIKIDKVYKRVFFTEAKKRYAGL----LEDGRV----DIVG 631
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+ VR DW+++A E + V +L E++ ++ E+++ I +L+ G +PL
Sbjct: 632 FEAVRGDWAEIAKEVQEKVTEILLSEKN---------IEKAIEYVRNIIAELNQGRIPLE 682
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQR 978
L I K LTK+ EEY PHV A ++ K++ GD I YI+ + +
Sbjct: 683 KLIIWKTLTKSVEEY--EAEAPHVNAARKMKRMGM-KIEVGDKIGYIVVKGSGKISDRAE 739
Query: 979 AYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
Y + KL +D YY+ QI P R+LE TD
Sbjct: 740 PYM---FVKDPKL-VDTIYYIDHQIIPAALRILEYFGVTD 775
>gi|21228106|ref|NP_634028.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
gi|20906547|gb|AAM31700.1| DNA polymerase delta catalytic subunit [Methanosarcina mazei Go1]
Length = 933
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 261/548 (47%), Gaps = 78/548 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYV-LPDKQYGKNKKEGEETGEANKG 618
I + V G++L + GG++ E LLL F + V LP K G+E
Sbjct: 404 IALAQVSGSLLQEIVDGGQTSMVETLLLREFGLRDRVILP--------KPGDELSAE--- 452
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT- 677
+ + GG VLEPKKG + +IL D+ SLYP+I+ +N+C+TT+ + D +
Sbjct: 453 RYDMSSDLKGGEVLEPKKGLLENVLIL-DYKSLYPTIMMAHNLCYTTVVTKDRPDGEAIK 511
Query: 678 --TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL--LMQYDIRQKALKL 733
+ E++P +V GI+PS ++ L+ R + K M+ L+SD D Q A+K+
Sbjct: 512 PPSGGEFVPP-EVYRGIVPSILEDLLNQRGETKKRMR---LTSDKNEYRVLDATQLAIKI 567
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN------------------ 775
NS YG G+ +R ++ LA VT+ GR +LNT+ L+ N
Sbjct: 568 LLNSFYGYSGYARARLYSLTLANAVTSFGRSNILNTRDLINNDIGKIVLRDSAALFLEEA 627
Query: 776 ---------LNYEVIYGDTDSLMISCNVN---DYDSVFKIGNQIKSECN-KLYKQLELDI 822
++ V YGDTDS+ + C + V +GN++ + L +EL+
Sbjct: 628 GEISPQDRVIDLSVAYGDTDSVFVHCRSEGDLSLEDVSLVGNRLSQIVSASLPDPMELEF 687
Query: 823 DGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL 882
+ + K LL+ KK+Y AL + + N ++KG++ VRRDW +L S V+ +L
Sbjct: 688 EAIAKRALLIAKKRY-ALWLFEPRNSGWENKIKVKGMETVRRDWCELTSITLNEVLKLVL 746
Query: 883 DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHV 942
+ D ++ + ++N+ ++ + D G + L +T+ LT+ + Y +++ PH+
Sbjct: 747 IKGD-VDGAV-EHVRNVVSDVRNLDPGKDAGII--EKLVLTRTLTRRTDSYKNKQ--PHL 800
Query: 943 QVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQ 1002
VA L G I ++I RA + + ++ ++ + +DV+YY+ +Q
Sbjct: 801 TVAENLKKRTGVMPSIGTRIPFVIV--AGKGLFVDRAEDPDYVREHN-VPLDVDYYVKKQ 857
Query: 1003 IHPVVTRLLEPIEGTDAVRIAECLGLDT---SLYRSQIKESIQQSEEN-------ILGVG 1052
I P V R+LE + G + L D+ L+ ++KE + +EN I G+
Sbjct: 858 ILPPVERILE-VFGVN----VSSLDFDSKQKGLFDFEVKEPGVKKQENQKVPSHKITGIV 912
Query: 1053 EAEEVKYQ 1060
+ E+V Q
Sbjct: 913 QEEKVPCQ 920
>gi|328865112|gb|EGG13498.1| DNA polymerase delta catalytic subunit [Dictyostelium fasciculatum]
Length = 1801
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 221/418 (52%), Gaps = 54/418 (12%)
Query: 624 AAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ---DSDITTLC 680
++ G V++P+ GFYD+ I +DF SLYPSI+ +N+C+TT+ + D + TL
Sbjct: 1282 VSFQGAYVIDPQVGFYDEPIATLDFTSLYPSIMMAHNLCYTTLLTAADKEKVDPNDYTLT 1341
Query: 681 E-----YLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALK 732
P H+ GILP +++L+ +R++ K +K P + L D RQ ALK
Sbjct: 1342 PSGSAFIKPSHR--KGILPKILEELLGARKKAKDDLKNEKDPFKRAVL----DGRQLALK 1395
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE----VIYG 783
++ANS+YG G + ++ VTA GR +L TK+ VEN YE +IYG
Sbjct: 1396 ISANSVYGFTGARVGKLPCLDISRSVTAFGRVMLDTTKNYVENTYTIANGYENDAKIIYG 1455
Query: 784 DTDSLMISCNVNDYDSVFKIGN----QIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAA 839
DTDS+M+ V ++G +I ++C + + LD + VY LL+ KK+YA
Sbjct: 1456 DTDSVMVKFGVKTVAEAIELGRKASKEITAKC--FIRPINLDFEKVYYPYLLINKKRYAG 1513
Query: 840 LSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQN 898
L +K ++ KM ++KG++VVRRD L + VIS +L++ +D +++
Sbjct: 1514 LFWTKTDTHDKM----DVKGLEVVRRDNCPLV----RMVISTVLNK-----ILIDKDIKS 1560
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN-SKKLK 957
E K I +DL + +++L ITK L+K +Y + + H +VAL++ N S
Sbjct: 1561 AEEFTKDIVSDLLQNKIDISMLVITKALSK--NDY--KGKVIHNEVALKMRALNPSTAPV 1616
Query: 958 QGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + ++I + + ++A++ + L+NN +++D YY Q+ + R+ EPI
Sbjct: 1617 LGDRVPFVITQGIKNAPLHEKAHDPLHVLENN--IQLDTKYYCDHQLRGPLMRIFEPI 1672
>gi|452210573|ref|YP_007490687.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
gi|452100475|gb|AGF97415.1| Archaeal DNA polymerase I [Methanosarcina mazei Tuc01]
Length = 926
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 261/548 (47%), Gaps = 78/548 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYV-LPDKQYGKNKKEGEETGEANKG 618
I + V G++L + GG++ E LLL F + V LP K G+E
Sbjct: 397 IALAQVSGSLLQEIVDGGQTSMVETLLLREFGLRDRVILP--------KPGDELSAE--- 445
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT- 677
+ + GG VLEPKKG + +IL D+ SLYP+I+ +N+C+TT+ + D +
Sbjct: 446 RYDMSSDLKGGEVLEPKKGLLENVLIL-DYKSLYPTIMMAHNLCYTTVVTKDRPDGEAIK 504
Query: 678 --TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL--LMQYDIRQKALKL 733
+ E++P +V GI+PS ++ L+ R + K M+ L+SD D Q A+K+
Sbjct: 505 PPSGGEFVPP-EVYRGIVPSILEDLLNQRGETKKRMR---LTSDKNEYRVLDATQLAIKI 560
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN------------------ 775
NS YG G+ +R ++ LA VT+ GR +LNT+ L+ N
Sbjct: 561 LLNSFYGYSGYARARLYSLTLANAVTSFGRSNILNTRDLINNDIGKIVLRDSAALFLEEA 620
Query: 776 ---------LNYEVIYGDTDSLMISCNVN---DYDSVFKIGNQIKSECN-KLYKQLELDI 822
++ V YGDTDS+ + C + V +GN++ + L +EL+
Sbjct: 621 GEISPQDRVIDLSVAYGDTDSVFVHCRSEGDLSLEDVSLVGNRLSQIVSASLPDPMELEF 680
Query: 823 DGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL 882
+ + K LL+ KK+Y AL + + N ++KG++ VRRDW +L S V+ +L
Sbjct: 681 EAIAKRALLIAKKRY-ALWLFEPRNSGWENKIKVKGMETVRRDWCELTSITLNEVLKLVL 739
Query: 883 DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHV 942
+ D ++ + ++N+ ++ + D G + L +T+ LT+ + Y +++ PH+
Sbjct: 740 IKGD-VDGAV-EHVRNVVSDVRNLDPGKDAGII--EKLVLTRTLTRRTDSYKNKQ--PHL 793
Query: 943 QVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQ 1002
VA L G I ++I RA + + ++ ++ + +DV+YY+ +Q
Sbjct: 794 TVAENLKKRTGVMPSIGTRIPFVIV--AGKGLFVDRAEDPDYVREHN-VPLDVDYYVKKQ 850
Query: 1003 IHPVVTRLLEPIEGTDAVRIAECLGLDT---SLYRSQIKESIQQSEEN-------ILGVG 1052
I P V R+LE + G + L D+ L+ ++KE + +EN I G+
Sbjct: 851 ILPPVERILE-VFGVN----VSSLDFDSKQKGLFDFEVKEPGVKKQENQKVPSHKITGIV 905
Query: 1053 EAEEVKYQ 1060
+ E+V Q
Sbjct: 906 QEEKVPCQ 913
>gi|410084320|ref|XP_003959737.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
gi|372466329|emb|CCF60602.1| hypothetical protein KAFR_0K02460 [Kazachstania africana CBS 2517]
Length = 1132
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 210/416 (50%), Gaps = 52/416 (12%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT+ +++ +D D I
Sbjct: 622 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLKLKKDKDYII 681
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y ++ GILP +++L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 682 TPNGDYFVSDKLRRGILPIILEELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 738
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GRE+++ TK+ V+ + +V+YGDT
Sbjct: 739 ANSVYGFTGATVGKLPCLAISSSVTAFGREMIMRTKTAVQEKYSVKNGYKHDAQVVYGDT 798
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + + L+K + L+ + Y LL+ KK+YA L +K
Sbjct: 799 DSVMVKFGTTDLQEAMDLGAEAAAYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLYWTK 858
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+ + + KG+ VRRD L S V+ IL +D L E +K
Sbjct: 859 VEKYDKL---DQKGLASVRRDSCSLVSIVMNKVLKMIL-----IGRDVDGAL----EFVK 906
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
K D+ + V ++ L I+K L AP YT+ + PH +A R+ + GD + Y
Sbjct: 907 KTIGDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLADRMKKRDGIGPNVGDRVDY 961
Query: 965 IICEDGTSEAATQRA----YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+I G ++ RA Y +E+ L++D YYL Q+ V ++ PI G
Sbjct: 962 VIT--GGNDKLYNRAEDPLYVLEQ-----NLQVDSKYYLQNQLQNPVISIIAPIIG 1010
>gi|58260420|ref|XP_567620.1| delta DNA polymerase [Cryptococcus neoformans var. neoformans JEC21]
gi|57229701|gb|AAW46103.1| delta DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1058
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 252/537 (46%), Gaps = 85/537 (15%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSDI-- 676
Y G V+EP KGFYD I +DF SLYPSI+ +N+C+TT+ +++++ D
Sbjct: 536 YEGATVIEPSKGFYDVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERLKLVEGEDYVH 595
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKA---LMKQPNLSSDLLMQYDIRQKALKL 733
T ++ + G+LP ++ L+ +R++ K + K P + L D RQ ALK+
Sbjct: 596 TPNNDFFATSKRRKGLLPHILENLLAARKRAKQDLKVEKDPFKRAVL----DGRQLALKV 651
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +++ VTA GR+++ TK VE + + +++YGD
Sbjct: 652 SANSVYGFTGATVGKLPCLAISSSVTAYGRQMIELTKKEVEAEYSMKNGYDHDAKIVYGD 711
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D + ++G + + K K ++L+ + VY LL+ KK+YA L +
Sbjct: 712 TDSVMVRFGCPDLPTAMRLGAEAADLVSGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWT 771
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ KM + KG++ VRRD +L S + + ++L +D ++ ++
Sbjct: 772 RPEKYDKM----DTKGIETVRRDNCRLVSTVIETCLFKML---------IDRDVKGAEDY 818
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K DL + ++ L ITK L KA +Y ++A HV++ R+ ++ GD
Sbjct: 819 VKDTIADLLQNKIDMSQLVITKALAKA--DYAAKQA--HVELVERMRKRDAGSAPSLGDR 874
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y+I + AA +++ + + L++N + ID YYL Q+ + R+ EPI G A
Sbjct: 875 VAYVIVKGVKGAAAYEKSEDPLYVLEHN--VPIDTRYYLENQLSKPLMRIFEPILGEKA- 931
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTV 1080
SL +IQ + I G+ +F K TCM C+
Sbjct: 932 ---------NSLLHGDHTRTIQIATPTIGGL-------MKFAVK-TVTCMG--CR----- 967
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCE 1137
P R V C+N K LP L K + + + W +C+
Sbjct: 968 -TPLRGKNESAV-----CVNCRPK------LPELYQKQVAQTSALQIDFARLWTQCQ 1012
>gi|68525479|gb|AAY98790.1| family B-type DNA polymerase [Staphylothermus marinus]
Length = 801
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 202/397 (50%), Gaps = 42/397 (10%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R +Y G +VL+P KG ++ I ++DF+S+YP+I+ +YN+ TI + D +
Sbjct: 411 RAAESYRGAVVLKPVKGVHEN-IAVLDFSSMYPNIMIKYNVGPDTIVRNEKCNPDKHNIA 469
Query: 681 EYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
PE + G ++ L+ R+Q+K+ MK+ +S D RQKA+K+ A
Sbjct: 470 ---PEVGHCFRKEPPGFFKRVLETLLRLRKQIKSEMKKYPPTSYEYRLLDERQKAVKVLA 526
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
N+ YG +G+ ++R++ + A VTA GR+ + + L L +VIYGDTDSL ++
Sbjct: 527 NATYGYMGWIHARWYCRECAEAVTAWGRQTIKSAIELARKLGLKVIYGDTDSLFVTY--- 583
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQ 854
D D V K+ I+++ E+ ID +YK + + KK+YA L L +G++
Sbjct: 584 DKDKVEKLIELIQTKLG-----FEIKIDKIYKRVFFTEAKKRYAGL----LEDGRI---- 630
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
+I G + VR DW+++A E + V +L E S + E+++++ DL G
Sbjct: 631 DIVGFEAVRGDWAEIAKEVQEKVTEILLKENS---------IDKAIEYVRQVIADLKAGK 681
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
+PL L I K L+K EEY+ PHV A +L K+ D I Y+I + G +
Sbjct: 682 IPLDKLIIWKTLSKRIEEYS--VDAPHVVAAKKLIKAGI-KVSTNDKIGYVILKGGGKIS 738
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ Y + KL ID YY+ QI P R+L
Sbjct: 739 SRAEPYI---FVKDPKL-IDTEYYVDHQIVPAALRIL 771
>gi|389582644|dbj|GAB65381.1| DNA polymerase delta catalytic subunit [Plasmodium cynomolgi strain
B]
Length = 1159
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/437 (31%), Positives = 230/437 (52%), Gaps = 49/437 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSDITTL- 679
Y G VLEP KG+Y + I +DF SLYPSI+ +N+C++T+ + L+ ++T++
Sbjct: 642 YEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLVKNNSEIEGLKQEEVTSIQ 701
Query: 680 ----CEYLPEHQVDTGILPSEIKKLVESRRQVKALMK-QPNLSSDLLMQYDIRQKALKLT 734
+++ + V GILP +++L+++R++VK L+K + N + +++ + RQ ALK++
Sbjct: 702 GKGNIKFV-KRSVKKGILPLIVEELIDARKKVKLLIKNEQNKITKMVL--NGRQLALKIS 758
Query: 735 ANSMYGCLGFPN-SRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGD 784
ANS+YG G + + +A +T GR ++ TK VE N V+YGD
Sbjct: 759 ANSVYGYTGAASGGQLPCLEVAVSITTLGRSMIDKTKETVEKYYSRSNGFEYNSTVVYGD 818
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAA-LSI 842
TDS+M+ N +G +K + ++L+ + VY LLL KK+YA L
Sbjct: 819 TDSVMVKFGTNSIAEAMALGKDAAQRISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYT 878
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ + KM C KG++ VRRD+ L + + V++++L E++ L + E+
Sbjct: 879 TPEKHDKMDC----KGIETVRRDFCILIQQMMETVLNKLLIEKN---------LNSAIEY 925
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
K DL + ++LL +TK L K +Y R LPHV++A +L +S GD
Sbjct: 926 TKSKIKDLLTNNIDMSLLVVTKSLGKT--DYETR--LPHVELAKKLKQRDSATAPNVGDR 981
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI-EGTDA 1019
+SYII + +A +RA + + L NN L ID N+YL I ++R+ E I + +D+
Sbjct: 982 VSYIIVKGVKGQAQYERAEDPLYVLDNN--LAIDYNHYL-DAIKNTLSRIFEVIMQNSDS 1038
Query: 1020 VRIAECLGLDTSLYRSQ 1036
+ E T L SQ
Sbjct: 1039 LFCGEHTRHKTILTSSQ 1055
>gi|134117391|ref|XP_772922.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255540|gb|EAL18275.1| hypothetical protein CNBK2930 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1059
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 252/537 (46%), Gaps = 85/537 (15%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSDI-- 676
Y G V+EP KGFYD I +DF SLYPSI+ +N+C+TT+ +++++ D
Sbjct: 537 YEGATVIEPSKGFYDVPIATLDFASLYPSIMMAHNLCYTTLLDKGTIERLKLVEGEDYVH 596
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKA---LMKQPNLSSDLLMQYDIRQKALKL 733
T ++ + G+LP ++ L+ +R++ K + K P + L D RQ ALK+
Sbjct: 597 TPNNDFFATSKRRKGLLPHILENLLAARKRAKQDLKVEKDPFKRAVL----DGRQLALKV 652
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +++ VTA GR+++ TK VE + + +++YGD
Sbjct: 653 SANSVYGFTGATVGKLPCLAISSSVTAYGRQMIELTKKEVEAEYSMKNGYDHDAKIVYGD 712
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D + ++G + + K K ++L+ + VY LL+ KK+YA L +
Sbjct: 713 TDSVMVRFGCPDLPTAMRLGAEAADLVSGKFIKPIKLEFEKVYFPYLLISKKRYAGLYWT 772
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ KM + KG++ VRRD +L S + + ++L +D ++ ++
Sbjct: 773 RPEKYDKM----DTKGIETVRRDNCRLVSTVIETCLFKML---------IDRDVKGAEDY 819
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K DL + ++ L ITK L KA +Y ++A HV++ R+ ++ GD
Sbjct: 820 VKDTIADLLQNKIDMSQLVITKALAKA--DYAAKQA--HVELVERMRKRDAGSAPSLGDR 875
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y+I + AA +++ + + L++N + ID YYL Q+ + R+ EPI G A
Sbjct: 876 VAYVIVKGVKGAAAYEKSEDPLYVLEHN--VPIDTRYYLENQLSKPLMRIFEPILGEKA- 932
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTV 1080
SL +IQ + I G+ +F K TCM C+
Sbjct: 933 ---------NSLLHGDHTRTIQIATPTIGGL-------MKFAVK-TVTCMG--CR----- 968
Query: 1081 EAPTRLSTHGVVFVLDECINPECKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKCE 1137
P R V C+N K LP L K + + + W +C+
Sbjct: 969 -TPLRGKNESAV-----CVNCRPK------LPELYQKQVAQTSALQIDFARLWTQCQ 1013
>gi|18313103|ref|NP_559770.1| DNA polymerase II [Pyrobaculum aerophilum str. IM2]
gi|18160611|gb|AAL63952.1| DNA-directed DNA polymerase (B3) [Pyrobaculum aerophilum str. IM2]
Length = 785
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 226/479 (47%), Gaps = 76/479 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E++LL + V P N++E
Sbjct: 355 IQLSSVSGLPLDQVAAASVGNRVEWMLLRYAYRLGEVAP------NREE----------- 397
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R+ Y G +VLEP+ G Y ++ +DF+S+YP+I+ +YN+ T R D
Sbjct: 398 -REYEPYKGAIVLEPRPGLYSD-VLALDFSSMYPNIMMKYNLSPDTYLERGEPDPPGGVY 455
Query: 680 CEYLPEHQV---DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
H+ G +P +++L+E R++V+ +K+ S D RQ+ALK+ AN
Sbjct: 456 VAPEVGHRFRREPPGFIPLVLRQLIELRKRVREELKKYPPDSPEYRVLDERQRALKIMAN 515
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVND 796
+MYG G+ +R++ + +A VTA R IL + VIYGDTDSL + +
Sbjct: 516 AMYGYTGWVGARWYKKEVAESVTAFARAILKDVIEYARKAGIVVIYGDTDSLFVKKS--- 572
Query: 797 YDSVFKIGNQIKSECNKLYKQLE------LDIDGVYKYMLLLK-KKKYAALSISKLSNGK 849
+ KL K +E + ID Y +L + KK+YA L L +G+
Sbjct: 573 ------------GDVEKLVKYVEEKYGIDIKIDKDYSTVLFTEAKKRYAGL----LRDGR 616
Query: 850 MICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTD 909
+ +I G +VVR DWS+LA E VI IL T + + Q + ++++ +
Sbjct: 617 I----DIVGFEVVRGDWSELAKEVQLRVIELIL-----TSRDVSEARQKVVKYVRGVIDK 667
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
L N V L L I K L K +EY + PHV A+ L K+ +G TI Y++ +
Sbjct: 668 LRNYEVDLDDLIIWKTLDKELDEY--KAYPPHVHAAILLKK-RGYKVGKGTTIGYVVVKG 724
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
G E ++RA + + + KID++YY+ +Q+ P A+RIAE +G+
Sbjct: 725 G--EKVSERA--VPYIFIDDIEKIDLDYYVERQVIPA------------ALRIAEVIGI 767
>gi|126465787|ref|YP_001040896.1| DNA polymerase II [Staphylothermus marinus F1]
gi|126014610|gb|ABN69988.1| replicative DNA polymerase I [Staphylothermus marinus F1]
Length = 801
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 202/397 (50%), Gaps = 42/397 (10%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R +Y G +VL+P KG ++ I ++DF+S+YP+I+ +YN+ TI + D +
Sbjct: 411 RAAESYRGAVVLKPVKGVHEN-IAVLDFSSMYPNIMIKYNVGPDTIVRNEKCNPDKHNIA 469
Query: 681 EYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
PE + G ++ L+ R+Q+K+ MK+ +S D RQKA+K+ A
Sbjct: 470 ---PEVGHCFRKEPPGFFKRVLETLLRLRKQIKSEMKKYPPTSYEYRLLDERQKAVKVLA 526
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
N+ YG +G+ ++R++ + A VTA GR+ + + L L +VIYGDTDSL ++
Sbjct: 527 NATYGYMGWIHARWYCRECAEAVTAWGRQTIKSAIELARKLGLKVIYGDTDSLFVTY--- 583
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQ 854
D D V K+ I+++ E+ ID +YK + + KK+YA L L +G++
Sbjct: 584 DKDKVEKLIELIQTKLG-----FEIKIDKIYKRVFFTEAKKRYAGL----LEDGRI---- 630
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
+I G + VR DW+++A E + V +L E S + E+++++ DL G
Sbjct: 631 DIVGFEAVRGDWAEIAKEVQEKVTEILLKENS---------IDKAIEYVRQVIADLKAGK 681
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
+PL L I K L+K EEY+ PHV A +L K+ D I Y+I + G +
Sbjct: 682 IPLDKLIIWKTLSKRIEEYS--VDAPHVVAAKKLIKAGI-KVSTNDKIGYVILKGGGKIS 738
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ Y + KL ID YY+ QI P R+L
Sbjct: 739 SRAEPYI---FVKDPKL-IDTEYYVDHQIVPAALRIL 771
>gi|322693697|gb|EFY85548.1| DNA polymerase delta catalytic subunit [Metarhizium acridum CQMa 102]
Length = 1104
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 212/421 (50%), Gaps = 47/421 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQDSDITTLCEYL 683
Y G V+EP +G+YD I +DF SLYPSIIQ +N+C+TT+ ++++ + +Y+
Sbjct: 576 YEGATVIEPVRGYYDVPIATLDFASLYPSIIQAHNLCYTTLVKDKKLIEKFGLVKDEDYI 635
Query: 684 PEHQVDT--------GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKL 733
DT G+L +++L+ +R+Q K + Q +D + + RQ ALK+
Sbjct: 636 VTPNGDTFVTTKQRKGLLAQILEELLTARKQAKRELAQ---ETDPFKKAVLNGRQLALKI 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK VE + +VIYGD
Sbjct: 693 SANSVYGLTGATTGKLPCLEIASSTTSFGRQMIERTKDEVEKKYNIANGYTHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 753 TDSVMVKFGTKDLAEAMKLGEEASHYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWT 812
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ KM + KG++ VRRD L + V+ IL +D + E+
Sbjct: 813 RPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDRDVSGAQEY 859
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K+ +L V ++ L ITK LTK ++Y ++A HV++A R+ ++ GD
Sbjct: 860 VKETIANLLQNKVDMSKLVITKALTK--DDYAAKQA--HVELAHRMKKRDAGSAPALGDR 915
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y++ +++ + + L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 916 VAYVMVRGAAGAKNFEKSEDPLYVLENN--VPIDTKYYLDNQLAKPLGRIFEPILGETKA 973
Query: 1021 R 1021
R
Sbjct: 974 R 974
>gi|324120752|dbj|BAJ78767.1| DNA polymerase delta catalytic subunit [Inocellia japonica]
Length = 1005
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 221/439 (50%), Gaps = 49/439 (11%)
Query: 607 KEGEETG---EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICF 663
K+G++ G ++G + Y G V+EP +G+Y I +DF+SLYPSI+ +N+C+
Sbjct: 462 KQGKQAGYLMPVHRG-AQSDEQYEGATVIEPIRGYYTDPIATLDFSSLYPSIMMAHNLCY 520
Query: 664 TTI--PVRM----LQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN 715
TT+ P L D I T + Y + + G+LP ++ L+ +R++ K + +
Sbjct: 521 TTLLNPHNKEKLGLTDDQITKTPMNNYFVKPSIRRGLLPQILENLLAARKRAKKELAE-- 578
Query: 716 LSSDLLMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV 773
+D + Q + RQ ALK++ANS+YG G + ++ VT GR ++ T+ V
Sbjct: 579 -ETDPVRQKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISGSVTGYGRTMIEYTRQEV 637
Query: 774 ENL-----NYE----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDID 823
E YE VIYGDTDS+M+ V D +G + + K K ++L+ +
Sbjct: 638 EQRYTIVNGYEHDAQVIYGDTDSVMVKFGVKDLKRCMDLGKEAAEYVSAKFIKPIKLEFE 697
Query: 824 GVYKYMLLLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL 882
VY LL+ KK+YA L +K KM C KG++ VRRD L + + + ++L
Sbjct: 698 KVYFPYLLINKKRYAGLYFTKPEKYDKMDC----KGIETVRRDNCPLVANTINYCLQKLL 753
Query: 883 DEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHV 942
+ D ++ E K++ +DL V ++ L ITK+LTK E+YT ++ HV
Sbjct: 754 IHRD-PDGAV--------EFTKQVISDLLCNRVDISNLVITKELTK--EDYTAKQV--HV 800
Query: 943 QVALRLNNTNSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLS 1000
++A +L + K GD + Y+IC + + + I L+N ++ ID YYL
Sbjct: 801 ELAKKLQKRDPGTAPKIGDRVPYVICTGAKNAPTYSKGEDPIYALEN--RIPIDTKYYLE 858
Query: 1001 QQIHPVVTRLLEPIEGTDA 1019
Q+ + R+ +PI G A
Sbjct: 859 NQLSKPLVRIFQPILGDKA 877
>gi|406862660|gb|EKD15710.1| DNA polymerase family B [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1103
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 233/475 (49%), Gaps = 65/475 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DF SLYPSIIQ +N+C+TT+ + +++D D +
Sbjct: 577 YEGATVIEPTRGYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKASVEKLGLVKDEDYIV 636
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q K A+ P + L + RQ ALK+
Sbjct: 637 TPNNDMFCTTKQRKGLLTQILEELLTARKQAKRELAVETDPFKKAVL----NGRQLALKI 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTK-------SLVENLNY--EVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK ++ ++ +VIYGD
Sbjct: 693 SANSVYGLTGATVGKLPCLAIASSTTSYGRQMIEKTKEEVEKKYTIANGYSHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ + K+G + + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 753 TDSVMVKFGCKELVEAMKLGEEAAAYVSSKFIKPIKLEFEKVYYPYLLINKKRYAGLY-- 810
Query: 844 KLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
+N + KG++ VRRD +L + V+ IL +D +Q +++
Sbjct: 811 -WTNPDKYDKMDTKGIETVRRDNCRLVQNVIETVLRMIL---------IDRDVQGAQDYV 860
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K +DL + ++ L ITK L KA +YT ++A HV++A R+ ++ GD +
Sbjct: 861 KDTISDLLQNKIDMSKLVITKALAKA--DYTAKQA--HVELAERMKKRDAGSAPTLGDRV 916
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVR 1021
+Y+I + +R+ + I L+NN + +D YYL Q+ + R+ EPI G
Sbjct: 917 AYVIIKGAAGAKNFERSEDPIFVLENN--IPVDTKYYLDNQLAKPLGRIFEPILGETKA- 973
Query: 1022 IAECLGLDTSLYRSQIKESIQQSEENILGVGEAEEVKYQFCDKFEFTCMNPSCKQ 1076
SL SI + +I G+ +F K FTCM CK+
Sbjct: 974 --------NSLLAGDHTRSISVAAPSIGGL-------MKFAKK-TFTCM--GCKK 1010
>gi|17225461|gb|AAL37413.1|AF326983_1 DNA polymerase alpha [Leishmania sp. MHOM/MQ/92/MAR1]
Length = 305
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 119/186 (63%), Gaps = 14/186 (7%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
R+T + GN+ SRTL+G RSER E+LLLH FH+ ++ PD+ + K+ G + E + G
Sbjct: 125 RLTTIAGNLWSRTLLGARSERIEYLLLHTFHDLKFITPDRHVQEFKR-GRDDDEED---G 180
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI---- 676
++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ + D+
Sbjct: 181 KRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTVDRENRSEVDVPPPE 240
Query: 677 TTLCEY-----LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKAL 731
+C L + +LP IK LV+SRR+VK LMK + L + +IRQKAL
Sbjct: 241 NLICASCTAAGLSSPCLHKCVLPKVIKSLVDSRREVKRLMKAEKDVNSLAL-LEIRQKAL 299
Query: 732 KLTANS 737
KLTANS
Sbjct: 300 KLTANS 305
>gi|73669283|ref|YP_305298.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
gi|72396445|gb|AAZ70718.1| replicative DNA polymerase I [Methanosarcina barkeri str. Fusaro]
Length = 932
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 233/494 (47%), Gaps = 71/494 (14%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+ + V G++L + GG++ E LLL F + VL K + G
Sbjct: 405 VALAQVSGSLLQEVVDGGQTSMVETLLLKEFGLRDRVLLPK--------------PDDGV 450
Query: 620 GRKKAAYS----GGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSD 675
++ A S GG VLEPKKG + +IL D+ SLYP+I+ +N+C+TT+ SD
Sbjct: 451 SAERYAMSSDLKGGEVLEPKKGLLENVLIL-DYKSLYPTIMMAHNLCYTTVVTG--DKSD 507
Query: 676 ITTL-----CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKA 730
T+ E++P +V GI+PS ++ L+ R Q K M+ + ++ + D Q A
Sbjct: 508 GVTIRPPSGGEFVP-SEVFKGIVPSILEDLLNKRTQTKKRMRGTSNENEYRV-LDATQLA 565
Query: 731 LKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN--------------- 775
LK+ NS YG G+ +R ++ LA VT+ GR +LNT+ ++ N
Sbjct: 566 LKILLNSFYGYSGYARARLYSLTLANAVTSFGRSNILNTREIINNTIGKIILRNKTALLL 625
Query: 776 ------------LNYEVIYGDTDSLMISCNVN---DYDSVFKIGNQIKSECN-KLYKQLE 819
+ V YGDTDS+ + C + V IGN++ + + L +E
Sbjct: 626 DEAGELSPQDRVVELSVAYGDTDSVFVHCKSRGDLSLEEVSLIGNRLANIVSVSLPDPME 685
Query: 820 LDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVIS 879
L+ + + K LL+ KK+Y AL + N ++KG++ VRRDW +L S V+
Sbjct: 686 LEFESIAKRALLIAKKRY-ALWFFEPKNSGWEDKIKVKGMETVRRDWCELTSVTLNRVLE 744
Query: 880 QILDEQSYTDYSLDDRLQNIHEHMKKIRT-DLDNGFVPLTLLEITKQLTKAPEEYTDRKA 938
+L + +D ++ + + + K+R D + L +T+ LT+ E Y +++
Sbjct: 745 LVLIKG-----DVDQAVEYVRQIVSKVRNLDPAKDSEIIESLVLTRTLTRKIESYKNKQ- 798
Query: 939 LPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYY 998
PH+ VA L G I ++I RA + + ++ + + IDV+YY
Sbjct: 799 -PHLTVAENLKKRTGVVPSIGTRIPFVIT--AGKGLFVDRAEDPDYVREKN-IPIDVDYY 854
Query: 999 LSQQIHPVVTRLLE 1012
+ +QI P V R+LE
Sbjct: 855 IKKQILPPVERILE 868
>gi|344233498|gb|EGV65370.1| DNA polymerase delta catalytic subunit [Candida tenuis ATCC 10573]
Length = 1060
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 207/413 (50%), Gaps = 43/413 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT------TIPVRMLQDSD--IT 677
Y G V+EP +G+YD I +DF+SLYPSI+ +N+C+T TI L + D +T
Sbjct: 539 YEGATVIEPSRGYYDVPITTLDFSSLYPSIMMAHNLCYTTLLNKQTIKTFGLNEDDYILT 598
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKLT 734
+Y + GILP+ + +L+ +R++ KA +K+ P S L + RQ ALK++
Sbjct: 599 PNGDYFVKDNKRQGILPTILNELLTARKKAKADLKKETDPFRKSVL----NGRQLALKIS 654
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGDT 785
ANS+YG G + +++ TA GR ++ TK+ VE + +V+YGDT
Sbjct: 655 ANSVYGFTGATIGKLPCLAISSSTTAFGRVMIEKTKNEVEEFYSKKNGFDYDAKVVYGDT 714
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+MI D ++G Q + +K ++L+ + Y LL+ KK+YA L
Sbjct: 715 DSVMIKFGYTDLSKCMELGEQAAEYVSSKFKNPIKLEFEKCYYPYLLINKKRYAGLY--- 771
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG++ VRRD +L V+ IL+E+ D +R +K
Sbjct: 772 WTNPNKFDKMDTKGIETVRRDNCRLVQNVITKVLVLILEER---DVGKAERF------VK 822
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ DL V L+ L ITK +K ++Y ++A H+ +A ++ ++ GD ++
Sbjct: 823 QTIADLLQNRVDLSQLVITKAYSK--QDYAAKQA--HIVLAEKMRKRDAGSAPTLGDRVA 878
Query: 964 YIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y+I ++ + + NS L IDVNYYL Q+ + R+ EPI G
Sbjct: 879 YVIINGPAGAKNYDKSEDPLYVLENS-LPIDVNYYLENQLSKPLMRIFEPIMG 930
>gi|157103868|ref|XP_001648163.1| DNA polymerase delta catalytic subunit [Aedes aegypti]
gi|108869323|gb|EAT33548.1| AAEL014178-PA [Aedes aegypti]
Length = 984
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 210/418 (50%), Gaps = 47/418 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVR----MLQDSDITT- 678
Y G V+EPK+G+Y I +DF SLYPSI+ +N+C+TT+ P L D IT
Sbjct: 462 YEGATVIEPKRGYYADPISTLDFASLYPSIMMAHNLCYTTLLQPANKEKLHLTDDQITRT 521
Query: 679 -LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMK---QPNLSSDLLMQYDIRQKALKLT 734
+ V GILP ++ L+ +R++ KA +K P S L D RQ ALK++
Sbjct: 522 PTNNVFVKSSVRKGILPEILESLLAARKRAKADLKVETDPFKRSVL----DGRQLALKIS 577
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE----VIYGDT 785
ANS+YG G + ++ VTA GR ++ TK VE YE VIYGDT
Sbjct: 578 ANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTKQEVEQRYTVENGYENDAVVIYGDT 637
Query: 786 DSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M++ V + ++G + +K K ++L+ + VY LL+ KK+YA L ++
Sbjct: 638 DSVMVNFGVKTLERSMELGREAAEFVSHKFVKPIKLEFEKVYYPYLLINKKRYAGLYFTR 697
Query: 845 LSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
KM C KG++ VRRD S L + + ++L E++ + E
Sbjct: 698 PDKYDKMDC----KGIETVRRDNSPLVANLMNSCLQKLLIERN---------PEGAVEFA 744
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL-KQGDTI 962
K+ DL + ++ L ITK+L K+ +Y ++A HV++A ++ + K GD +
Sbjct: 745 KQTIADLLCNRIDISQLVITKELAKS--DYAAKQA--HVELANKMKKRDPGSAPKLGDRV 800
Query: 963 SYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
Y+I + A Q+A + I L+N + ID YYL Q+ + R+ EPI G A
Sbjct: 801 PYVIINAAKNTPAYQKAEDPIYVLENC--VPIDSKYYLENQLSKPLLRIFEPILGDKA 856
>gi|221053875|ref|XP_002261685.1| dna polymerase delta catalytic subunit [Plasmodium knowlesi strain H]
gi|193808145|emb|CAQ38848.1| dna polymerase delta catalytic subunit,putative [Plasmodium knowlesi
strain H]
Length = 1096
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 230/437 (52%), Gaps = 49/437 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSDITTL- 679
Y G VLEP KG+Y + I +DF SLYPSI+ +N+C++T+ + L+ DIT++
Sbjct: 579 YEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLVKNNSEIEGLEQEDITSIQ 638
Query: 680 ----CEYLPEHQVDTGILPSEIKKLVESRRQVKALMK-QPNLSSDLLMQYDIRQKALKLT 734
+++ + V GILP +++L+++R++VK L+K + N + +++ + RQ ALK++
Sbjct: 639 GKSNIKFV-KKSVKKGILPMIVEELIDARKKVKLLIKNEKNKITKMVL--NGRQLALKIS 695
Query: 735 ANSMYGCLGFPN-SRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGD 784
ANS+YG G + + +A +T GR ++ TK VE N V+YGD
Sbjct: 696 ANSVYGYTGAASGGQLPCLEVAVSITTLGRSMIDKTKESVEKYYNKSNGFEHNCTVVYGD 755
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAA-LSI 842
TDS+MI + +G +K + ++L+ + VY LLL KK+YA L
Sbjct: 756 TDSVMIKFGTSSIAEAMALGKDAAQRISKEFLHPIKLEFEKVYCPYLLLNKKRYAGLLYT 815
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ + KM C KG++ VRRD+ L + + V++++L E+ +LD + E+
Sbjct: 816 TPEKHDKMDC----KGIETVRRDFCILIQQMMETVLNKLLIEK-----NLDSAI----EY 862
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
K DL + ++LL +TK L K +Y R LPHV++A +L +S GD
Sbjct: 863 TKSKIKDLLTNNIDMSLLVVTKSLGKT--DYETR--LPHVELAKKLKQRDSATAPNVGDR 918
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI-EGTDA 1019
+SYII + +A +RA + + L NN L ID N+YL I ++R+ E I +D+
Sbjct: 919 VSYIIIKGVKGQAQYERAEDPLYVLDNN--LAIDYNHYLD-AIKNTLSRIFEVIMNNSDS 975
Query: 1020 VRIAECLGLDTSLYRSQ 1036
+ E T L SQ
Sbjct: 976 LFCGEHTRHKTILTSSQ 992
>gi|301764899|ref|XP_002917866.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit-like [Ailuropoda melanoleuca]
Length = 1106
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 233/489 (47%), Gaps = 66/489 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N ME R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 528 VLVNAMEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMREGLLMP-----VVKTEGG 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 579 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 625
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D L
Sbjct: 626 AAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLR 682
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 683 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 742
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYML 830
N +V+YGDTDS+M V+ +G + + + + L+ + VY L
Sbjct: 743 NGYGANAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPPPIRLEFEKVYFPYL 802
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 803 LISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL------ 852
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 853 ---IDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 907
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVV 1007
+ GD + Y+I AA ++ + + +S L ID Y ++ P++
Sbjct: 908 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYXKKKKKKPLL 966
Query: 1008 TRLLEPIEG 1016
R+ EPI G
Sbjct: 967 -RIFEPILG 974
>gi|374633834|ref|ZP_09706199.1| DNA polymerase elongation subunit (family B) [Metallosphaera
yellowstonensis MK1]
gi|373523622|gb|EHP68542.1| DNA polymerase elongation subunit (family B) [Metallosphaera
yellowstonensis MK1]
Length = 797
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 227/460 (49%), Gaps = 65/460 (14%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++T + G L + M R E+LL+ ++ + ++P N+ E
Sbjct: 376 QLTIISGLPLDQLPMASVGYRVEWLLMREAYKFNELIP------NRLE------------ 417
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R +Y GGLV+EPK G ++ ++L DF S+YPSI+ +YNI T+ +D C
Sbjct: 418 RPHESYKGGLVIEPKPGIHENVVVL-DFTSMYPSIMVKYNIGPDTLVRGECRD------C 470
Query: 681 EYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
PE + G +K L+E R+ +K +K + + RQKALK+ A
Sbjct: 471 WTAPEVGYKFRKSPDGFYRRILKVLLEERKAIKEKLKDVT-DEYERRRLEERQKALKVMA 529
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
N+ YG +G+ N+R++++ A VTA GRE + + + +E+IYGDTDS+ + +++
Sbjct: 530 NAFYGYMGWLNARWYSKEGAEAVTAWGRETIRKAIEMASGMGFEIIYGDTDSIFVKGDLS 589
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQ 854
K+G ++ ++L LE+ +D YK + + KK+YA L+ K+
Sbjct: 590 ------KVGRLVEEITSRL--DLEIKVDKKYKRIFFTENKKRYAGLT----EENKI---- 633
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
+I G + +R DW +LA EA + VI L + +D+ ++ E + +IR N
Sbjct: 634 DIVGFEAIRGDWCELAKEAQRMVIETTLLK------GVDEAVKKAKEIIMRIRRREFN-- 685
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
L L I K L K+ EEY PHV +A + ++ + +G I Y++ + +
Sbjct: 686 --LQELVIWKSLEKSLEEY--EVDAPHV-IAAKKAMSSGYVIMKGGKIGYVVVKGVGKVS 740
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
Y + + KN +IDV+YY+ +QI P V R+LEP
Sbjct: 741 DRVEPYFMVKDKN----RIDVDYYVDKQIVPAVLRILEPF 776
>gi|119872473|ref|YP_930480.1| DNA polymerase II [Pyrobaculum islandicum DSM 4184]
gi|6752664|gb|AAF27815.1|AF195019_1 family B DNA polymerase [Pyrobaculum islandicum DSM 4184]
gi|119673881|gb|ABL88137.1| replicative DNA polymerase I [Pyrobaculum islandicum DSM 4184]
Length = 785
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 232/482 (48%), Gaps = 76/482 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E++LL + V P N++E
Sbjct: 354 IQLSSVSGLPLDQVAAASVGNRVEWMLLRYAYRLGEVAP------NREE----------- 396
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ--DSDIT 677
R+ Y G +VLEPK G Y+ ++L DF+S+YP+I+ +YN+ P L+ + D
Sbjct: 397 -REYEPYKGAIVLEPKPGMYEDVLVL-DFSSMYPNIMMKYNLS----PDTYLEPGEPDPP 450
Query: 678 TLCEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
PE + G +P +K LVE R+ V+ K+ S D RQ+ALK
Sbjct: 451 EGVNVAPEVGHRFRRSPPGFVPQVLKSLVELRKAVREEAKKYPPDSPEFKILDERQRALK 510
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
+ AN++YG LG+ +R++ + +A VTA R IL + L V+YGDTDSL +
Sbjct: 511 VMANAIYGYLGWVGARWYKREVAESVTAFARAILKDVIEQARRLGIVVVYGDTDSLFVKK 570
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMI 851
+ D D + K + +++ +D Y +L + KK+YA L L +G++
Sbjct: 571 H-GDVDKLIKYVEEKYG--------IDIKVDKDYAKVLFTEAKKRYAGL----LRDGRI- 616
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD--YSLDDRLQNIHEHMKKIRTD 909
+I G +VVR DWS+LA + VI IL + + + + ++ I E +K + +
Sbjct: 617 ---DIVGFEVVRGDWSELAKDVQLRVIEIILKSRDIVEARHGVIKYIREIIERLKNYKFN 673
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
+D+ L I K L K +EY + PHV A ++ + ++ +G TI Y+I +
Sbjct: 674 IDD-------LIIWKTLDKELDEY--KAYPPHVHAA-QILKRHGYRVGKGTTIGYVIVKG 723
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLD 1029
G E ++RA L + KID++YY+ +QI P A+RIAE +G+
Sbjct: 724 G--EKVSERALPYILLDDIK--KIDIDYYIERQIIPA------------ALRIAEVIGVK 767
Query: 1030 TS 1031
S
Sbjct: 768 ES 769
>gi|435849896|ref|YP_007301837.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
gi|433663384|gb|AGB50809.1| DNA polymerase elongation subunit (family B) [Methanomethylovorans
hollandica DSM 15978]
Length = 924
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 233/494 (47%), Gaps = 68/494 (13%)
Query: 562 ITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGR 621
+ V G L + GG++ E LL+ F E ++ K + +E E
Sbjct: 393 LAQVSGRPLQDVINGGQTNLVEQLLMSRFREIDRLMAMKPNDEIVEERE----------- 441
Query: 622 KKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPV--RMLQDSDITTL 679
+++ G VL+PKKG + ++ D+ SLYP+I+ N+C+TT+ + ++S I +
Sbjct: 442 RESNVVGADVLDPKKGLHCNTVV-EDYKSLYPTIMMARNLCYTTVIIDKTTPKESMIISP 500
Query: 680 CE-YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
+ + + ++ GI+PS ++ L++ R K +MK ++ + D Q ALK+ NS
Sbjct: 501 SDGHFIKPEIFKGIIPSILEGLLDKRVATKKMMKNARDENEKRV-LDATQLALKILLNSF 559
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----------------------- 775
YG G+ +R F+ +A VT+ GRE + NT++ + N
Sbjct: 560 YGYSGYIRARLFSLEVANSVTSYGRENIRNTQNTINNEIVTLTIRDNQALTPNESDGTQP 619
Query: 776 ----LNYEVIYGDTDSLMISC-NVND---------YDSVFKIGNQIKSEC-NKLYKQLEL 820
+ IYGDTDS+ I C ++N D +G +I +KL + +EL
Sbjct: 620 NDIIVLLTPIYGDTDSIFIHCTDINGNEFEEEEFTLDMSALVGKKIAEVVTSKLPEPMEL 679
Query: 821 DIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQ 880
+ K +LL+ KK+YA + +G I ++KG++ VRRDW L S+ ++
Sbjct: 680 QYEATAKRILLVAKKRYAMWQFEQAKDG-WIQKIKVKGLETVRRDWCNLTSKTLNIILEA 738
Query: 881 ILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALP 940
IL E D + +Q++ ++KI D F+ L ++K L++ P Y +++ P
Sbjct: 739 ILKEGD-VDKCI-TYVQDVIAKIRKINDTRDEAFI--AELTLSKTLSRPPSSYKNKQ--P 792
Query: 941 HVQVALRLNNTNSKKLKQGDTISYIICEDGTS--EAATQRAYNIEELKNNSKLKIDVNYY 998
H+ V ++ + G+ I ++I G+ E A AY IE + ID NYY
Sbjct: 793 HLTVVEKIRERGGQVPITGERIPFLITTVGSGYVEQAEDPAYVIEH-----NIPIDTNYY 847
Query: 999 LSQQIHPVVTRLLE 1012
+ +QI P RLLE
Sbjct: 848 IQKQIIPPALRLLE 861
>gi|302308438|ref|NP_985361.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|299790630|gb|AAS53185.2| AFL189Wp [Ashbya gossypii ATCC 10895]
gi|374108589|gb|AEY97495.1| FAFL189Wp [Ashbya gossypii FDAG1]
Length = 1092
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 218/437 (49%), Gaps = 61/437 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRMLQ-----DSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT+ V+ LQ D I
Sbjct: 582 YQGATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNLCYTTLCNKATVQRLQLKENEDYII 641
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP +++L+ +R++ K +K+ D+L + RQ ALK++
Sbjct: 642 TPNGDYFVTSKKRRGILPIILEELIAARQRAKGELKKETDPFKKDVL---NGRQLALKIS 698
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++ TK VE + V+YGDT
Sbjct: 699 ANSVYGFTGATVGKLPCLSISSSVTAYGRTMIETTKRAVEEKYTIKNGYKHDAIVVYGDT 758
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+MI N+ ++G + + + L+K + L+ + VY LL+ KK+YA L +K
Sbjct: 759 DSVMIKFGTNELKQTMELGAEAAAYVSSLFKHPINLEFEKVYFPYLLINKKRYAGLYWTK 818
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS------YTDYSLDDRLQN 898
+ + KG+ VRRD L S ++ IL E++ + + +++D LQN
Sbjct: 819 PEKYDKL---DQKGLASVRRDSCPLVSIVMNKILRMILIERNVPGALKFVENTIEDLLQN 875
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
+ D+ + TL AP YT+ A PH +A R+ +
Sbjct: 876 --------KADISKLIISKTL---------AP-NYTN--AQPHAILAERMKKRDGVGPNV 915
Query: 959 GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG- 1016
GD + Y+I G ++ RA N + L+ N +++D YYL+ Q+ V ++ PI G
Sbjct: 916 GDRVDYVII--GGNDKLYNRAENPLYVLEQN--IQLDSKYYLTTQLQNPVVSIIAPIIGE 971
Query: 1017 --TDAVRIAECLGLDTS 1031
+A+ I + + + TS
Sbjct: 972 KQANAMFIVKSIKIATS 988
>gi|71033557|ref|XP_766420.1| DNA polymerase delta catalytic subunit [Theileria parva strain
Muguga]
gi|68353377|gb|EAN34137.1| DNA polymerase delta catalytic subunit, putative [Theileria parva]
Length = 1095
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 215/422 (50%), Gaps = 46/422 (10%)
Query: 618 GKGRKKA---AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRM 670
G G+ + +Y G VLEP KG++ I ++DF SLYPSI+ +NIC++T+ +
Sbjct: 561 GGGKSSSNENSYEGATVLEPLKGYHKNPISVLDFQSLYPSIMIAHNICYSTLLNYNTINN 620
Query: 671 LQDSDITTLCEYLPEHQVDT----GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
+ DI T+ Y ++ GILP ++ L+ R++ K +M + D +++ Y
Sbjct: 621 YKPEDIVTVPGYNDICFINVKKRKGILPIIVENLINERKKAKKMMNE---CKDEMLKKVY 677
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFF-AQPLAALVTAKGREILLNTKSLVE--------- 774
D RQ ALK+T NS+YG G + F +A +T+ GR +++NTK L+E
Sbjct: 678 DGRQLALKITTNSVYGYTGATSGGFLPCIDVATAITSFGRNMIVNTKDLIEEHFSRKNGF 737
Query: 775 NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLK 833
+ +VIYGDTDS+MI+ +D +G +K + + L + VYK +LLL
Sbjct: 738 KFDSKVIYGDTDSVMINFGTDDIQEAIDLGKSAADLITSKSVRPITLLFEKVYKPLLLLS 797
Query: 834 KKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLD 893
KK+YA L N + I + KG++ VRRD+ L + + I +L + D +++
Sbjct: 798 KKRYAGLYYVNSENYEKI---DCKGIESVRRDFCLLIQQMLE-KILYLLLVKLDLDGAIE 853
Query: 894 DRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNS 953
Q + E +K D+D ++LL ITK L K E + LPHV++A +L +
Sbjct: 854 FVKQKVSELLKN---DID-----VSLLVITKTLGKVDYE----QRLPHVELAKKLRKRDP 901
Query: 954 KKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
K GD ISYII + E RA + N+ L ID NYYL + V+ R+ E
Sbjct: 902 GKAPGVGDRISYIIVKGTKGEPLFDRAEEPLYVTENN-LPIDTNYYL-DSLKNVLLRIFE 959
Query: 1013 PI 1014
+
Sbjct: 960 VV 961
>gi|159041906|ref|YP_001541158.1| DNA polymerase Pol2 [Caldivirga maquilingensis IC-167]
gi|157920741|gb|ABW02168.1| DNA polymerase Pol2 [Caldivirga maquilingensis IC-167]
Length = 781
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 230/456 (50%), Gaps = 57/456 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+++ +V G L + R E +++H ++ + P N+ E
Sbjct: 358 MQLASVSGLPLDQVGPASVGSRVEMMIMHEAYKMGELAP------NRVE----------- 400
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R Y G +VLEPK G + I ++DF+S+YP+I+ +YNI T+ V + D T
Sbjct: 401 -RPYETYKGAIVLEPKPGIHYN-IAVLDFSSMYPNIMLKYNISPDTL-VLDSSEGDYYTA 457
Query: 680 CEY-LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSM 738
E + G+ S ++KL+E+RR+ + M+ S + + RQ+ALK+ AN+M
Sbjct: 458 PEVGYRFRKSPRGLYASLLQKLIEARREARDEMRNYPEGSFEWVLLNERQRALKIMANAM 517
Query: 739 YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
YG G+ +R++ + +A VTA GR +L S+ + VIYGDTDSL ++ D D
Sbjct: 518 YGYCGWLGARWYIREVAESVTAWGRYLLKTAMSMAKERGLTVIYGDTDSLFVTY---DKD 574
Query: 799 SVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQEIK 857
V I S N++ E+ ID VY ++ + KK+Y L+ ++G++ +I
Sbjct: 575 KV----ADIISRINEM--GFEVKIDKVYSKLIFTESKKRYIGLT----ADGEV----DIV 620
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G + VR DWS+LA + V +L E S+D+ ++ ++K + DL N +
Sbjct: 621 GFEAVRGDWSELARNVQERVAELVLRE------SVDEAVK----YVKSVIDDLRNYRFTI 670
Query: 918 TLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAAT 976
+ I K L K EY KA+ PHV A RL + +GDT+ ++I +D + + T
Sbjct: 671 DDVIIWKTLDKDINEY---KAIQPHVVAARRLME-KGYVVNKGDTVGFVIVKD-SGDKLT 725
Query: 977 QRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
QRAY + N +IDV+YY+ +Q+ P R+LE
Sbjct: 726 QRAYPYVFI--NDVKEIDVDYYVEKQVIPAALRILE 759
>gi|327401413|ref|YP_004342252.1| DNA polymerase Pol2 [Archaeoglobus veneficus SNP6]
gi|327316921|gb|AEA47537.1| DNA polymerase Pol2 [Archaeoglobus veneficus SNP6]
Length = 786
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 222/452 (49%), Gaps = 66/452 (14%)
Query: 577 GRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKK 636
GR ++ E+LL+ ++ + P+ + E GE Y G VLEP +
Sbjct: 364 GRGKQVEWLLMSEAYKLGELAPNPR---------EAGEK----------YEGAFVLEPAR 404
Query: 637 GFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSE 696
G ++ +I +DF S+YPSI+ +NI T+ + D ++ + + D G
Sbjct: 405 GLHEN-VICLDFASMYPSIMISFNISPDTLVIGKCDDCNVAPEVGHKFRREPD-GFFKRI 462
Query: 697 IKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAA 756
++ L+E RR++K +MK+ + S+ DI+Q LK+ NS YG G+ +R++ + A
Sbjct: 463 LRMLIEKRREIKKIMKKLDRESNEYRLLDIKQATLKVLTNSFYGYTGWSLARWYCRECAE 522
Query: 757 LVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK 816
TA GR + + + + L EV+YGDTDS+ + + + + ++K E KL
Sbjct: 523 ATTAWGRHFIKKSAQIAKELGLEVLYGDTDSIFVKKSGLNLE-------ELKKEVRKLIG 575
Query: 817 QLE------LDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLA 870
+L ++ID Y + ++KK+YA L+ ++G+++ +KG++V R DW +LA
Sbjct: 576 KLREEMPILIEIDEYYSAIFFVEKKRYAGLT----ADGRIV----VKGLEVRRGDWCELA 627
Query: 871 SEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAP 930
K VI IL ++ + +++K+ ++ +G VP+ I K LT+ P
Sbjct: 628 KRVQKNVIEIILKDRD---------PEKAVNYVRKVIEEIKSGKVPIEDYIIYKGLTRKP 678
Query: 931 EEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYN---IEELKN 987
+Y +A HV+ A++ G + +++ + GT RA+ IE+
Sbjct: 679 SKYESMQA--HVKAAMKAAKKGI-VYTIGSKVGFVVLK-GTGNIG-DRAFPSDLIEDFDG 733
Query: 988 NS-------KLKIDVNYYLSQQIHPVVTRLLE 1012
+S + K+D +YY+ Q+ PVV R+LE
Sbjct: 734 DSIVDVDGNRYKLDKDYYIDNQVIPVVMRILE 765
>gi|169615194|ref|XP_001801013.1| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
gi|160702905|gb|EAT82147.2| hypothetical protein SNOG_10753 [Phaeosphaeria nodorum SN15]
Length = 1115
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 214/419 (51%), Gaps = 47/419 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EPK+G+Y + + +DF SLYPSI+Q +N+C+TT ++M +D D +
Sbjct: 582 YEGATVIEPKRGYYKQPVATLDFASLYPSIMQAHNLCYTTWLDRQTVEKLKMKKDEDYIV 641
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + + G+L +++L+ +R++ K K+ + +D + + RQ ALK+T
Sbjct: 642 TPNGDMFCTAKTRKGLLSQILEELLGARKRAK---KELAVETDPFKKAVLNGRQLALKVT 698
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G N + +A+ T+ GR+++ TK+ VE + + EVIYGDT
Sbjct: 699 ANSVYGLTGATNGKLPCLAIASSTTSIGRQMIEKTKAEVEAKYNIANGYSHDAEVIYGDT 758
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ ++ K+G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 759 DSVMVKFGTSELAEAMKLGEEAAQYVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLY--- 815
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG++ VRRD +L + +L +D + E +K
Sbjct: 816 WTNPVKWDKMDTKGIETVRRDNCRLVVNVIDTSLRMLL---------IDQDPEGAQEFVK 866
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEE-----YTDRKALPHVQVALRLNNTNSKKLKQ- 958
+ DL + L+ L ITK LTK + Y +++A HV++A R+ ++
Sbjct: 867 ETIADLLQNKIDLSNLVITKALTKQENKDGTGGYANKQA--HVELAERMKKRDAGSAPAL 924
Query: 959 GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
GD ++Y++ + + +++ + + L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 925 GDRVAYVMIKSASGARNFEKSEDPLYVLENN--IPIDTKYYLDNQLAKPLGRIFEPILG 981
>gi|324120756|dbj|BAJ78769.1| DNA polymerase delta catalytic subunit [Stichotrema asahinai]
Length = 1050
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 233/491 (47%), Gaps = 70/491 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +L+ L G + LL +Y +P Q + E
Sbjct: 477 NDIEMARVTGV---MLTSLLAKGEQVKVVAQLLRHCQAANYFMPMHQVNLDATE------ 527
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVR 669
+ G V+EP +G+Y I +DF+SLYPSI+ +N+C+TT+ R
Sbjct: 528 ----------QFEGATVIEPIRGYYTNPIATLDFSSLYPSIMIAHNLCYTTLLNPGDKAR 577
Query: 670 M-LQDSDI--TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQ 723
L D I T + V G+LP ++ L+ +R++ K +K P S L
Sbjct: 578 YELTDDQISLTPANNQFVKSSVRRGLLPQILESLLSARKRTKLQLKNELDPIKKSVL--- 634
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------- 775
D +Q ALK++ANS+YG G + ++ VTA GR ++ TK VEN
Sbjct: 635 -DGKQLALKISANSVYGFTGAQVGKLPCLQISGSVTAYGRLMINMTKEEVENHFTVANGY 693
Query: 776 -LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLK 833
N VIYGDTDS+MI NV + ++G + E + K ++L+ + VY LL+
Sbjct: 694 ESNARVIYGDTDSVMIDFNVKAIEKSMELGREAAREISAKFIDPIKLEFEKVYFPYLLIN 753
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM C KG++ VRRD L + + ++L +
Sbjct: 754 KKRYAGLYFTRPDKYDKMDC----KGIETVRRDNCTLVVDLINTCLQKLL---------I 800
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL---N 949
D + K+I +DL + ++ L ITK+LTK +Y ++A H ++A ++ +
Sbjct: 801 DRDPDGAVMYAKQIISDLLRNDIDISQLVITKELTK--NDYQAKQA--HSELAQKMAKRD 856
Query: 950 NTNSKKLKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVT 1008
N+ KL GD I Y+I + A Q+A I L+NN + ID YYL QI +
Sbjct: 857 PGNAPKL--GDRIPYVITAASKNTPAFQKAEEPIYVLENN--IPIDTRYYLENQISKPLV 912
Query: 1009 RLLEPIEGTDA 1019
R+ +P+ G +A
Sbjct: 913 RIFQPVLGDNA 923
>gi|294496641|ref|YP_003543134.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
gi|292667640|gb|ADE37489.1| replicative DNA polymerase I [Methanohalophilus mahii DSM 5219]
Length = 918
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 242/501 (48%), Gaps = 79/501 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVL---PDKQYGKNKKEGEETGEAN 616
I ++ V G +L + GG++ E LLL + +++ V+ PD+ + +++ E
Sbjct: 390 IAVSQVSGTLLQDVISGGQTNMVEQLLLSEYGKQNRVMSSKPDEHTSQQRRKLNEN---- 445
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI 676
GG VLEP KG ++ ++L D+ SLYP+II +N+C+TT+ ++D+++
Sbjct: 446 ---------LKGGAVLEPHKGLHENVLVL-DYKSLYPTIIMAHNLCYTTV----VEDTNL 491
Query: 677 TT-------LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQK 729
T + + + GI+PS ++ L+ R + K +MK+ + D Q
Sbjct: 492 KTDDLIISPTGDKFVKPHLYKGIVPSVLEDLLRRRSETKQIMKKTR-DENQHRVLDATQL 550
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV---------------- 773
ALK+ NS YG G+ +R ++ +A VT+ GRE + T+ +V
Sbjct: 551 ALKILLNSFYGYSGYARARLYSLGMAGSVTSIGRENIARTEEIVCSQIGSVVLRNDEVYF 610
Query: 774 -----------ENLNYEVIYGDTDSLMISCNVND----------YDSVFKIGNQIKSECN 812
+ +N ++YGDTDS+ + C D + ++G+++ S
Sbjct: 611 RDEAGEIGSDDKKVNLSIVYGDTDSVFVHCMDRDNRELSPDDLTLEESARVGSKVASLVT 670
Query: 813 -KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLAS 871
L +EL+ + + +LL+ KK+YA + + + G ++KG++ VRRDW +L S
Sbjct: 671 ASLPDPMELEFEATARRVLLVAKKRYAQW-LFEPAEGGWKDKIKVKGLETVRRDWCELTS 729
Query: 872 EAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRT-DLDNGFVPLTLLEITKQLTKAP 930
V+ +L E +++ ++++ + ++R D+ + L +TK +K+P
Sbjct: 730 NMLNRVLEYVLKEG-----NVEKAVEHVKTTVDRVRNLDVTRDSDIIDDLVLTKTFSKSP 784
Query: 931 EEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSK 990
Y +++ PH+ V ++ + G+ I ++I + RA + + ++ ++
Sbjct: 785 SSYKNKQ--PHLTVVEKIEQRTGMRPSIGERIPFVIV--AGKDLFVNRAEDPDYVRQHN- 839
Query: 991 LKIDVNYYLSQQIHPVVTRLL 1011
+ +DV+YY+ +Q+ P V R+L
Sbjct: 840 IALDVDYYIQKQLLPPVERIL 860
>gi|449301894|gb|EMC97903.1| hypothetical protein BAUCODRAFT_31911 [Baudoinia compniacensis UAMH
10762]
Length = 1107
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 215/419 (51%), Gaps = 54/419 (12%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSDI-- 676
Y G V+EP +G+YD + +DF SLYPSI+Q +N+C+TT+ + + +D D
Sbjct: 581 YEGATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLLNKTAIEKLSLKKDEDYIQ 640
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + +V G+L +++L+ +R++ K K+ + +D + + RQ ALK++
Sbjct: 641 TPNGDLFCTAKVRKGLLSQILEELLSARKRAK---KELAVETDTFRKAVLNGRQLALKVS 697
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +A+ T+ GR+++ TK VE + +VIYGDT
Sbjct: 698 ANSVYGLTGATVGKLPCLAIASSTTSYGRQMIEKTKEEVEARYTIANGYTHDAQVIYGDT 757
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ +D ++G +K + + ++L+ + VY LL+ KK+YA L +K
Sbjct: 758 DSVMVKFGPSDLAKAMELGQDAADYVSKKFIRPIKLEFEKVYYPYLLINKKRYAGLYWTK 817
Query: 845 LSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHM 903
KM + KG++ VRRD +L Q + E S +D +Q +++
Sbjct: 818 PEKYDKM----DTKGIETVRRDNCRLV---------QTVIETSLRMLLMDRDVQGAQDYV 864
Query: 904 KKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTI 962
K ++L G + ++ L ITK LTK+ +Y ++A H ++A R+ ++ GD +
Sbjct: 865 KNTISELLLGKIDMSNLVITKALTKS--DYASKQA--HTELAERMRKRDAGSAPALGDRV 920
Query: 963 SYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+Y++ + A+ R Y E L++N L IDV YYL Q+ + R+ EPI G
Sbjct: 921 AYVMVKG----ASGSRGYENSEDPMFVLEHN--LPIDVRYYLDNQLSKPLGRIFEPILG 973
>gi|330507958|ref|YP_004384386.1| DNA polymerase 2 [Methanosaeta concilii GP6]
gi|328928766|gb|AEB68568.1| DNA polymerase 2 [Methanosaeta concilii GP6]
Length = 891
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 241/496 (48%), Gaps = 69/496 (13%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I ++ G++L + GG+S E LLL F E S V+P K E E KG
Sbjct: 385 IALSRASGSLLQDIVNGGQSGMVENLLLRRFREISRVVPPKPDSGLSDERYVENEELKG- 443
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS----D 675
G VL P+KG + +IL D+ SLYP+I+ +N+C++T+ +L DS D
Sbjct: 444 ---------GAVLVPEKGLVEDVVIL-DYKSLYPTIMMAHNLCYSTV---VLADSPEKKD 490
Query: 676 ITTLCE--YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKL 733
I T V +G++P +K+L++ R + K LMK+ + + D +Q ALK+
Sbjct: 491 IITSPSGGSFVSPNVSSGVMPQVLKELLDQRTETKRLMKKASEEERRFL--DAKQYALKI 548
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL----------------- 776
NS YG G+ +R ++ LA VT+ GRE ++ TK +++++
Sbjct: 549 LLNSFYGYSGYARARLYSLALANAVTSFGRENIIRTKKIIDDIGSVYVIEGRAVFKDELK 608
Query: 777 ---------NYEVIYGDTDSLMISCNVND----YDSVFKIGNQI-KSECNKLYKQLELDI 822
+ V+YGDTDS+ + + ++ + IG +I ++ + L + +EL
Sbjct: 609 LGAPTGKGFDLNVVYGDTDSVFVRLSPHNEPVSLEDAGLIGKKIAETVTSSLPQPMELVF 668
Query: 823 DGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL 882
+ + + L KK+Y AL I + + +++G++ VRRDW L S K + +L
Sbjct: 669 EAFARRGIFLAKKRY-ALWIFEQMGEEWKDRIKVRGMETVRRDWCGLTSGTLKTCLELVL 727
Query: 883 DEQSYTDYSLDDRLQNIHEHMKKIRT-DLDNGFVPLTLLEITKQLTKAPEEYTDRKALPH 941
E +D+ ++++ + +++ DL L L +T++ TK+ Y +++ PH
Sbjct: 728 KEG-----KVDEAVEHVRSVVVRLQNLDLSQDPGILEELTLTRRYTKSTGSYKNKQ--PH 780
Query: 942 VQVALRLNNTNSKKLKQGDTISYIICED-GTSEAAT---QRAYNIE-ELKNNSKLKIDVN 996
+Q+ ++ K GD + ++I G + T RA + E L+NN + +D
Sbjct: 781 IQLVEKMRERGGKVPTVGDRVPFVIIRGKGGKKNKTLFVDRAEDPEFVLENN--ISLDTE 838
Query: 997 YYLSQQIHPVVTRLLE 1012
YY+++QI P V R+ E
Sbjct: 839 YYVNKQILPPVMRIFE 854
>gi|427792855|gb|JAA61879.1| Putative dna polymerase type-b family, partial [Rhipicephalus
pulchellus]
Length = 1003
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 226/482 (46%), Gaps = 60/482 (12%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V ++ L G+ + LL E+ V+P E GE
Sbjct: 432 NYMEMARVTGV---PMTYLLSRGQQIKVVSQLLRKAAEQDLVMPVVH--------SEAGE 480
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PVRML 671
+ G V+EP KGFY I +DF+SLYPSI+ +N+C+TT+ R L
Sbjct: 481 D----------FEGATVIEPVKGFYSVPIATLDFSSLYPSIMMAHNLCYTTVLDNRQREL 530
Query: 672 QDSD---ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDI 726
D T ++ + V G+LP ++ L+ +R++ K +K +D + D
Sbjct: 531 LKPDQFIRTPSGDHFVKASVRKGLLPEILEDLLSARKRAKTDLKN---ETDPFRKKVLDG 587
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE-- 779
RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE YE
Sbjct: 588 RQLALKISANSVYGFTGAQVGKLPCLAISKSVTAFGRTMIEKTKQEVEARYTRANGYEHD 647
Query: 780 --VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKK 836
VIYGDTDS+MI N + ++G + + K + + L+ + VY LL+ KK+
Sbjct: 648 AKVIYGDTDSVMIRFGTNSLEKAMELGREAATYVTAKFVRPINLEFEKVYYPYLLINKKR 707
Query: 837 YAALSISKL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
YA L ++ + KM C KG++ VRRD L + + +IL ++
Sbjct: 708 YAGLLYTRPETYDKMDC----KGIETVRRDNCPLVANLINTCLERIL---------INRD 754
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
E K+ DL V ++ L ITK+LTK EY ++A HV++A R+ ++
Sbjct: 755 PDGAVEFAKQTIADLLCNRVDISQLVITKELTKNDGEYAAKQA--HVELAHRMRKRDAGS 812
Query: 956 LKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + Y+I AA ++ + + +S + ID YYL Q+ + R+ EPI
Sbjct: 813 APNLGDRVPYVIVAASKGTAAYLKSEDPMYVLEHS-VPIDTQYYLENQLSKPLLRIFEPI 871
Query: 1015 EG 1016
G
Sbjct: 872 LG 873
>gi|322703524|gb|EFY95132.1| DNA polymerase delta catalytic subunit [Metarhizium anisopliae ARSEF
23]
Length = 1104
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 210/421 (49%), Gaps = 47/421 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQDSDITTLCEYL 683
Y G V+EP +G+YD I +DF SLYPSIIQ +N+C+TT+ ++++ + +Y+
Sbjct: 576 YEGATVIEPVRGYYDVPIATLDFASLYPSIIQAHNLCYTTLVKDKKLIEKFGLVKDEDYI 635
Query: 684 PEHQVDT--------GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKL 733
DT G+L +++L+ +R+Q K + Q +D + + RQ ALK+
Sbjct: 636 VTPNGDTFVTTKQRKGLLAQILEELLTARKQAKRELAQ---ETDPFKKAVLNGRQLALKI 692
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G + +A+ T+ GR+++ TK VE + +VIYGD
Sbjct: 693 SANSVYGLTGATTGKLPCLEIASSTTSFGRQMIERTKDEVEKKYNIANGYTHDAQVIYGD 752
Query: 785 TDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 753 TDSVMVKFGTKDLAEAMKLGEEASHYVSSKFVKPIKLEFEKVYFPYLLINKKRYAGLYWT 812
Query: 844 KLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+ KM + KG++ VRRD L + V+ IL +D + E+
Sbjct: 813 RPEKYDKM----DTKGIETVRRDNCLLVQTVIEKVLRMIL---------IDRDVGGAQEY 859
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDT 961
+K L V ++ L ITK LTK ++Y ++A HV++A R+ ++ GD
Sbjct: 860 VKDTIASLLQNKVDMSKLVITKALTK--DDYAAKQA--HVELAHRMKKRDAGSAPALGDR 915
Query: 962 ISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAV 1020
++Y++ +++ + + L+NN + ID YYL Q+ + R+ EPI G
Sbjct: 916 VAYVMVRGAAGAKNFEKSEDPLYVLENN--VPIDTKYYLDNQLAKPLGRIFEPILGETKA 973
Query: 1021 R 1021
R
Sbjct: 974 R 974
>gi|384248668|gb|EIE22151.1| DNA polymerase delta subunit one [Coccomyxa subellipsoidea C-169]
Length = 1116
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 241/494 (48%), Gaps = 78/494 (15%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N +E R+T V +S L G+S + +L +K+ ++P++ + +G TG+
Sbjct: 535 NYIEMARVTGV---PMSFLLTRGQSIKVFSQILRKARQKNLLVPNQP----RMQGA-TGD 586
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRM 670
AY G VL+ K+GFY + +DF SLYPSI+ +N+C++T+ V+
Sbjct: 587 G--------VAYEGATVLDAKQGFYKTPVATLDFASLYPSIMMAHNLCYSTLLPPDRVKE 638
Query: 671 LQDSDI----TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--Y 724
L D+ T C GILP +++L+ +R++ KA +K +SD M+
Sbjct: 639 LSPEDVLRCPTGHC--FVRAARAKGILPEILEELLGARKRAKADLKA---ASDPFMKAVL 693
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------N 775
D RQ ALK++ANS+YG G + ++A VTA GR ++ +TK LVE
Sbjct: 694 DGRQLALKVSANSVYGFTGAVIGKMPCLEISASVTAFGRNMIDHTKKLVEERYQRKNGYE 753
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKK 834
+ +VIYGDTDS+M+ V D ++G + +K + K ++L+ + VYK LL+ K
Sbjct: 754 ADCDVIYGDTDSVMVHFRVKDIGRAMELGREAADFVSKTFVKPIKLEFEKVYKPYLLINK 813
Query: 835 KKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DEQ---SY 887
K+YA L +K KM + KG++ VRRD QL + IL DE+ +Y
Sbjct: 814 KRYAGLLYTKPDKYDKM----DTKGIETVRRDNCQLVRTVVSTCLEMILINEDEEGAKAY 869
Query: 888 TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITK-----QLTKAPEEYTDRKALPHV 942
++ D L N R D L+LL ITK L++A Y ++ HV
Sbjct: 870 VRATISDLLMN--------RLD-------LSLLVITKARTQSALSRADTAYAAKQG--HV 912
Query: 943 QVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLS 1000
++A ++ + GD ++Y+ + A +A + I L++N L ID +YL
Sbjct: 913 ELAKKMRKRDPATAPTVGDRVAYVHIKAAKGVKAYDKAEDPIYALEHN--LPIDFQHYLD 970
Query: 1001 QQIHPVVTRLLEPI 1014
+ + RL P+
Sbjct: 971 HHLEQPLQRLFGPM 984
>gi|320586772|gb|EFW99435.1| DNA polymerase delta catalytic subunit [Grosmannia clavigera kw1407]
Length = 1105
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 214/427 (50%), Gaps = 60/427 (14%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +GFY + +DF SLYPSI+Q +N+C+TT+ + +D D +
Sbjct: 578 YEGATVIEPVRGFYKVPVATLDFASLYPSIMQAHNLCYTTLVNNAAIEAFGLKKDVDYIV 637
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDLLMQYDIRQKALKL 733
T + + G+L +++L+ +R+Q + A+ P + L + RQ ALK+
Sbjct: 638 TPNKDKFVTTKQRKGLLAQILEELLAARKQARRELAMETDPFKKAVL----NGRQLALKI 693
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGD 784
+ANS+YG G N + +A T+ GR+++ T++ VE + N +VIYGD
Sbjct: 694 SANSVYGLTGATNGKLPCLEIARSTTSYGRQMIEQTRNEVEQRYSVANGYSHNAQVIYGD 753
Query: 785 TDSLMISCNVNDYDSVFKIG-NQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSIS 843
TDS+M+ D K+G + + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 754 TDSVMVKFGTKDLTEAMKLGEDAAQFVSSKFAKPIKLEFEKVYYPYLLINKKRYAGLYWT 813
Query: 844 KL-SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQIL---DE---QSYTDYSLDDRL 896
K + KM + KG++ VRRD L V+ IL DE Q+Y ++ D L
Sbjct: 814 KPEAYDKM----DTKGIETVRRDNCLLVQTVIDKVLRMILVDQDEVGAQAYVKDTIADLL 869
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
QN V ++ L ITK LTK E YT ++A HV++A R+ ++
Sbjct: 870 QNK---------------VDMSKLVITKALTK--ESYTAKQA--HVELAERMKKRDAGSA 910
Query: 957 KQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD ++Y++ + +R+ + I L++N + ID YYL Q+ + R+ EPI
Sbjct: 911 PGLGDRVAYVMVKGAAGSKNFERSEDPIYVLEHN--VPIDTKYYLDNQLAKPLGRIFEPI 968
Query: 1015 EGTDAVR 1021
G R
Sbjct: 969 LGETKAR 975
>gi|326428620|gb|EGD74190.1| polymerase [Salpingoeca sp. ATCC 50818]
Length = 1139
Score = 153 bits (386), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 217/416 (52%), Gaps = 43/416 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSDITTL- 679
Y G V++PK+G+YD I +DF+SLYPSI+ +N+C+TT+ + D I T
Sbjct: 613 YEGATVIQPKRGYYDTPIATLDFSSLYPSIMMAHNLCYTTLLSPQERSHLHPDDYIKTPN 672
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKLTAN 736
+Y +++V G+LP ++ L+ +R++ KA +K+ P S L + RQ ALK++AN
Sbjct: 673 GDYFVKNKVRKGLLPLILESLLSARKRAKADLKKETDPFRKSVL----NGRQLALKISAN 728
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYEVIYGDTDS 787
S+YG G + +++ VTA GRE++ TK VE+ + VIYGDTDS
Sbjct: 729 SVYGFTGATVGKLPCLAISSSVTAFGREMIEATKQHVESRYNVKNGYKHDAVVIYGDTDS 788
Query: 788 LMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
+M+ ++ + K+ + +K + + L+ + VY LL+ KK+YA L ++
Sbjct: 789 VMVKFGLDSLEETMKVAQEAAEYVTSKFIRPINLEFEKVYFPYLLINKKRYAGLFWTRTE 848
Query: 847 N-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKK 905
KM C KG+ VRRD L + ++L E++ ++ + KK
Sbjct: 849 KWDKMDC----KGLVTVRRDNCPLVVTLINTCLHKLLIERN---------VEGAIDFAKK 895
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISY 964
+DL + ++ L ITK LTK +EY ++A HV++A R+ ++ GD ++Y
Sbjct: 896 TISDLLCNEIDISQLVITKALTKTADEYDGKQA--HVELAERMRKRDAGSAPTLGDRVAY 953
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDA 1019
+I A +++ + I L+NN +++D YYL Q+ + + EPI G+ A
Sbjct: 954 VIIRGPKGAPAFEKSEDPIYVLENN--IQLDTQYYLHNQLEKPLMSIFEPILGSRA 1007
>gi|237506873|gb|ACQ99189.1| family B DNA polymerase [Thermococcus guaymasensis]
Length = 775
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 213/438 (48%), Gaps = 55/438 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ + P NK + E R++ +Y+GG V EP++G ++
Sbjct: 354 EWFLLRKAYERNELAP------NKPDERELA-------RRRESYAGGYVKEPERGLWEN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +DF SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDFMSLYPSIIITHNVSPDTLNREGCREYDVAPEVGHKFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R+++K MK L +L D RQ+A+K+ ANS YG G+ +R++ + A
Sbjct: 454 GDLLEERQKIKRKMKATIDPLEKKIL---DYRQRAIKILANSYYGYYGYAKARWYCRECA 510
Query: 756 ALVTAKGREILLNT-KSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GRE + T + + E ++V+Y DTD + + ++V K + N K
Sbjct: 511 ESVTAWGREYIETTIREIEEKFGFKVLYADTDGFFATIPGANAETVKKKAREFLKYINAK 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G Y + KKKYA + GK+ +G+++VRRDWS++A E
Sbjct: 571 LPGLLELEYEGFYLRGFFVTKKKYALID----EEGKITT----RGLEIVRRDWSEIAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ IL ++ +K++ L VP L I +Q+T+ +Y
Sbjct: 623 QARVLEAILKHGD---------IEEAVRIVKEVTEKLSKYEVPPEKLVIHEQITRDLRDY 673
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
+ PHV VA RL K++ G ISYI+ S RA +E + +K K
Sbjct: 674 --KATGPHVAVAKRL-AARGVKIRPGTVISYIVLRG--SGRIGDRAIPADEF-DPTKHKY 727
Query: 994 DVNYYLSQQIHPVVTRLL 1011
D YY+ Q+ P V R+L
Sbjct: 728 DAEYYIENQVLPAVERIL 745
>gi|412988964|emb|CCO15555.1| DNA polymerase delta catalytic subunit [Bathycoccus prasinos]
Length = 1114
Score = 152 bits (385), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 233/479 (48%), Gaps = 56/479 (11%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I ++ V G LS L G+S + LL ++ ++P ++ N + GE
Sbjct: 536 IEMSRVTGVPLSFLLARGQSIKVMSQLLRKARQRGLIIPARRDRGNGPNAQLEGEV---- 591
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
AY G VL+ K G+Y+ I +DF SLYPSI+ +N+C+ T +++ D+ L
Sbjct: 592 -----AYEGATVLDAKAGYYELPIATLDFASLYPSIMMAHNLCYCT----LVKQHDVADL 642
Query: 680 C--EYLPEHQVDT--------GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIR 727
Y D GILP +++L+ +R++ K +K+ ++D L + D R
Sbjct: 643 PPEAYTKAPTGDVFVKSTQFKGILPEILEELLSARKRAKQDLKK---ATDPLERAVLDGR 699
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NY 778
Q ALK++ANS+YG G + ++A TA GR+++ +TK LVE +
Sbjct: 700 QLALKISANSVYGFTGATVGQLPCLEISASTTAYGRQMIDHTKKLVEEKYTTANGYEGDA 759
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKY 837
EVIYGDTDS+MI N + + + G + + + K ++L+ + Y LL+ KK+Y
Sbjct: 760 EVIYGDTDSVMIKFNCKELKTSMEYGLEAADYVSATFTKPIKLEFEKCYWPYLLISKKRY 819
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
A L N + + KG++ VRRD L + + +++IL +D +
Sbjct: 820 AGL---LWENSEKWTKMDTKGIETVRRDNCLLVRQVVETCLTKIL---------MDRDIP 867
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
++++ +DL + L+LL ITK LTK +EY + A H ++A R+ +
Sbjct: 868 GAVKYVQNTISDLLMNKLDLSLLVITKGLTKTADEYAVKAA--HAELAQRMFLRDPATAP 925
Query: 958 -QGDTISYIICEDGTSEAATQRA-YNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD ++Y++ + + +++ I + NN L ID +YL + + RL EPI
Sbjct: 926 VVGDRVAYVMIKATKNAKGYEKSECPIYAMDNN--LPIDHKHYLDNFLTKPLLRLFEPI 982
>gi|452986964|gb|EME86720.1| hypothetical protein MYCFIDRAFT_202624 [Pseudocercospora fijiensis
CIRAD86]
Length = 1089
Score = 152 bits (385), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 215/418 (51%), Gaps = 52/418 (12%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD + +DF SLYPSI+Q +N+C+TT+ + + +D D +
Sbjct: 563 YEGATVIEPTRGYYDVPVATLDFASLYPSIMQAHNLCYTTLLNKTAIEKLDLKKDEDYIV 622
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + +V G+L +++L+ +R++ K K+ + +D + + RQ ALK++
Sbjct: 623 TPNGDLFCTTKVRKGLLSQILEELLGARKRAK---KELAVETDPFKKAVLNGRQLALKIS 679
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +A+ T+ GR+++ TK+ VE + + +VIYGDT
Sbjct: 680 ANSVYGLTGATVGKLPCLAIASSTTSYGRQMIEKTKAEVEARYTIANGYSHDAQVIYGDT 739
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ ND ++G + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 740 DSVMVKFGPNDLAKAMELGEDAANYVSSKFIKPIKLEFEKVYYPYLLINKKRYAGLY--- 796
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG++ VRRD +L + + +L EQ +Q +++K
Sbjct: 797 WTNTTKYDKMDTKGIETVRRDNCRLVQNVIETSLRMLLIEQD---------VQGAQDYVK 847
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTIS 963
+ ++L + ++ L ITK L+K+ +Y ++A H ++A R+ ++ GD ++
Sbjct: 848 ETISELLQNRIDMSNLVITKALSKS--DYASKQA--HTELAERMRKRDAGSAPALGDRVA 903
Query: 964 YIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
Y++ + AA + Y E L++N L ID YYL Q+ + R+ EPI G
Sbjct: 904 YVMVKG----AAGSKGYEKSEDPMFVLEHN--LPIDTKYYLDNQLAKPLGRIFEPILG 955
>gi|451998244|gb|EMD90709.1| hypothetical protein COCHEDRAFT_1179801 [Cochliobolus heterostrophus
C5]
Length = 1115
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 214/419 (51%), Gaps = 47/419 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EPK+G+Y + + +DF SLYPSI+Q +N+C+TT ++M +D D +
Sbjct: 582 YEGATVIEPKRGYYKEPVATLDFASLYPSIMQAHNLCYTTWLDRQTVEKLKMKKDEDYIV 641
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + + G+L +++L+ +R++ K K+ + +D + + RQ A+K+T
Sbjct: 642 TPNGDMFCTAKTRKGLLTEILEELLSARKKAK---KELAVETDPFKKAVLNGRQLAMKVT 698
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G N + +A+ T+ GR+++ K+ VE + + EVIYGDT
Sbjct: 699 ANSVYGLTGATNGKLPCLAIASSTTSFGRQMIERAKAEVEAKYNIANGYSHDAEVIYGDT 758
Query: 786 DSLMISCNVNDYDSVFKIGNQ-IKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ + K+G + K +K K ++L+ + VY LL+ KK+YA L
Sbjct: 759 DSVMVKFGTTELAEAMKLGEEAAKYVTSKFLKPIKLEFEKVYFPYLLINKKRYAGLY--- 815
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG++ VRRD +L Q + E S +D + E +K
Sbjct: 816 WTNPNKWDKMDTKGIETVRRDNCRLV---------QTVIETSLRMLLIDQDPEGAQEFVK 866
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEE-----YTDRKALPHVQVALRLNNTNSKKLKQ- 958
+ DL + ++ L ITK LTK ++ Y +++A HV++A R+ ++
Sbjct: 867 ETIADLLQNKIDMSNLVITKALTKQEDKDGKGGYANKQA--HVELAERMKKRDAGSAPAL 924
Query: 959 GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
GD ++Y++ T +++ + I L+NN L ID YYL Q+ + R+ EPI G
Sbjct: 925 GDRVAYVMVRAATGAKNFEKSEDPIYVLENN--LPIDTRYYLDNQLAKPLGRIFEPILG 981
>gi|332308985|gb|AEE39463.1| DNA polymerase [Thermococcus celericrescens]
Length = 775
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 202/400 (50%), Gaps = 42/400 (10%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT--- 677
R++ +Y+GG V EP++G +D I+ +DF SLYPSII +N+ T+ ++ D
Sbjct: 379 RRRNSYTGGYVKEPERGLWDN-IVYLDFRSLYPSIIITHNVSPDTLNREGCKEYDEAPQV 437
Query: 678 --TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKL 733
C+ P G +PS + L++ R+++K MK L LL D RQ+A+K+
Sbjct: 438 GHKFCKDFP------GFIPSLLGNLLDERQKIKKRMKATIDPLEKKLL---DYRQRAIKI 488
Query: 734 TANSMYGCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISC 792
ANS YG + +R++ + A VTA GRE I ++ + + E ++V+Y DTD +
Sbjct: 489 LANSYYGYYAYARARWYCKECAESVTAWGREYIEMSIREIEEKYGFKVLYADTDGFHATI 548
Query: 793 NVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMI 851
D ++V K + N KL LEL+ +G YK + KKKYA + GK+
Sbjct: 549 PGADAETVKKKAMEFLKYINAKLPGALELEYEGFYKRGFFVTKKKYAVID----EEGKIT 604
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLD 911
+G+++VRRDWS++A E V+ +L D ++ +K++ L
Sbjct: 605 T----RGLEIVRRDWSEIAKETQARVLEALLK---------DGNVEEAVSIVKEVTEKLG 651
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT 971
VP L I +Q+T+ ++Y + PHV +A RL K++ G ISYI+ +
Sbjct: 652 KYEVPPEKLVIHEQITRELKDY--KATGPHVAIAKRL-AARGVKIRPGTVISYIVLKG-- 706
Query: 972 SEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
S RA +E + +K + D YY+ Q+ P V R+L
Sbjct: 707 SGRIGDRAIPFDEF-DPTKHRYDAEYYIENQVLPAVERIL 745
>gi|237831459|ref|XP_002365027.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|211962691|gb|EEA97886.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
ME49]
gi|221506807|gb|EEE32424.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
VEG]
Length = 1268
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 229/479 (47%), Gaps = 61/479 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+ ++ V G L+ L G+ + LL E +YV+P K+ G
Sbjct: 699 VEMSRVTGTPLNFLLTRGQQIKVTAQLLRKCKELNYVVP-----VVKRTG---------- 743
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRMLQDSD 675
G Y G VLEP+KGFYDK I +DF SLYPSI+ +NIC++T+ + + D
Sbjct: 744 GDNSVQYEGATVLEPRKGFYDKPIATLDFASLYPSIMIAHNICYSTLVASSAAHTMNNPD 803
Query: 676 ITTLCEYLPEHQ-----VDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQ 728
T+ P H+ + G+LP +++L+ +R KA K+ + D + + + RQ
Sbjct: 804 DVTVTTTSPPHKFVKKHIRRGVLPMIVEELIAAR---KAARKEMAAAKDEMTRQVLNGRQ 860
Query: 729 KALKLTANSM-YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NY 778
ALK++ANS+ + +A +T GR+++ T+ VE + N
Sbjct: 861 LALKISANSVYGYTGTTTGGQLPCLEVATTITCFGRDMIDFTRREVEKMFCRDNQHACNA 920
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKY 837
VIYGDTDS+M+ K+G + + K K + L+ + VY LL+ KK+Y
Sbjct: 921 TVIYGDTDSVMVDFGDFSIAEAMKLGEEAAQALSEKFVKPIRLEFEKVYCPFLLMNKKRY 980
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
A L ++ I S KG++ VRRD+S L V+ ++L +D ++
Sbjct: 981 AGLLYTRPEKYDKIDS---KGIETVRRDFSLLVQTMADTVLRKML---------IDKDVE 1028
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
E+ ++ +L + L+LL TK L K +Y R LPHV++A +L ++
Sbjct: 1029 AAKEYTRRKVAELLQNKIDLSLLVQTKSLGKM--DYDTR--LPHVELAKKLRKRDAGTAP 1084
Query: 958 Q-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD +SY++ + +A +RA + + L+NN L ID +YL + I + R+ E +
Sbjct: 1085 SVGDRVSYVVIQGAKGQAQYERAEDPLYVLENN--LPIDTQHYL-EGIKKPLCRIFEGV 1140
>gi|340052318|emb|CCC46594.1| putative DNA polymerase delta catalytic subunit [Trypanosoma vivax
Y486]
Length = 1026
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 228/495 (46%), Gaps = 69/495 (13%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
+ N +E R+T V G +L R G+ + +LL + ++P +Y + G
Sbjct: 451 IVVNHVEMARVTGVPIGWLLER----GQQIKVFSMLLRKARLRDLLIPTLEYSGGDQRG- 505
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM 670
+ G V+EP KG Y ++ +DF SLYPSII +N+C++T +
Sbjct: 506 ---------------FEGATVIEPTKGLYMTPVVTLDFASLYPSIIIAHNLCYST----L 546
Query: 671 LQDSDI----------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL 720
+QD + T Y V G+LP ++ L+ +R+ + LM S
Sbjct: 547 VQDCNAERYPKDGLNHTPTGHYFVSRDVYPGVLPEVLQDLLLARKNARELMASVPKDS-- 604
Query: 721 LMQYDI---RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN 777
++Y + RQ ALK++ANS+YG G R L+A VT GR ++ + KS VE+L+
Sbjct: 605 -LEYKVLNGRQLALKVSANSVYGFTGAQVGRLPCLELSASVTGFGRLMIDSAKSHVESLD 663
Query: 778 --YEVIYGDTDSLMISCNVND-------YDSVFKIGNQIKSECNK-LYKQLELDIDGVYK 827
+VIYGDTDS+MI+ + + K G + ++ + L+ + VY
Sbjct: 664 PRVKVIYGDTDSVMINYKSSSATTEKEQLEEAMKFGKMAAEKVSQEFLNPIRLEFEKVYF 723
Query: 828 YMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSY 887
LL+ KK+YA L +N + KG++ VRRD L + V+++IL ++S
Sbjct: 724 PYLLMNKKRYAGL---LWTNTVQYDKLDTKGIETVRRDNCPLVASVISGVLNRILIQRSE 780
Query: 888 TDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR 947
E +K DL + ++ L ITK +KA EY +A H+ + R
Sbjct: 781 ASAV---------EFVKGTIRDLLLNRLDISQLVITKTFSKAEVEYAGAQA--HIALVER 829
Query: 948 LNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHP 1005
+ + GD ++Y+I A +R+ + + L+NN + ID YYL Q+ P
Sbjct: 830 MRKRDPASAPTIGDRVAYVIVRAAKGAKAYERSEDPLYVLENN--IPIDTQYYLEHQLGP 887
Query: 1006 VVTRLLEPIEGTDAV 1020
+ R+ E + AV
Sbjct: 888 PLLRVFEGVIDNPAV 902
>gi|221487122|gb|EEE25368.1| DNA polymerase delta catalytic subunit, putative [Toxoplasma gondii
GT1]
Length = 1268
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 229/479 (47%), Gaps = 61/479 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+ ++ V G L+ L G+ + LL E +YV+P K+ G
Sbjct: 699 VEMSRVTGTPLNFLLTRGQQIKVTAQLLRKCKELNYVVP-----VVKRTG---------- 743
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRMLQDSD 675
G Y G VLEP+KGFYDK I +DF SLYPSI+ +NIC++T+ + + D
Sbjct: 744 GDNSVQYEGATVLEPRKGFYDKPIATLDFASLYPSIMIAHNICYSTLVASSAAHTMNNPD 803
Query: 676 ITTLCEYLPEHQ-----VDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQ 728
T+ P H+ + G+LP +++L+ +R KA K+ + D + + + RQ
Sbjct: 804 DVTVTTTSPPHKFVKKHIRRGVLPMIVEELIAAR---KAARKEMAAAKDEMTRQVLNGRQ 860
Query: 729 KALKLTANSM-YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NY 778
ALK++ANS+ + +A +T GR+++ T+ VE + N
Sbjct: 861 LALKISANSVYGYTGTTTGGQLPCLEVATTITCFGRDMIDFTRREVEKMFCRDNQHACNA 920
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKY 837
VIYGDTDS+M+ K+G + + K K + L+ + VY LL+ KK+Y
Sbjct: 921 TVIYGDTDSVMVDFGDFSIAEAMKLGEEAAQALSAKFVKPIRLEFEKVYCPFLLMNKKRY 980
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
A L ++ I S KG++ VRRD+S L V+ ++L +D ++
Sbjct: 981 AGLLYTRPEKYDKIDS---KGIETVRRDFSLLVQTMADTVLRKML---------IDKDVE 1028
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
E+ ++ +L + L+LL TK L K +Y R LPHV++A +L ++
Sbjct: 1029 AAKEYTRRKVAELLQNKIDLSLLVQTKSLGKM--DYDTR--LPHVELAKKLRKRDAGTAP 1084
Query: 958 Q-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD +SY++ + +A +RA + + L+NN L ID +YL + I + R+ E +
Sbjct: 1085 SVGDRVSYVVIQGAKGQAQYERAEDPLYVLENN--LPIDTQHYL-EGIKKPLCRIFEGV 1140
>gi|330793430|ref|XP_003284787.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
gi|325085281|gb|EGC38691.1| DNA polymerase delta catalytic subunit [Dictyostelium purpureum]
Length = 1026
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 212/420 (50%), Gaps = 45/420 (10%)
Query: 617 KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQ--- 672
K G+ + G +V+EPK FYD I +DF SLYPSI+ +N+C++T +P +
Sbjct: 500 KVTGKAGEKFKGAVVIEPKCAFYDTPIATLDFTSLYPSIMMAHNLCYSTLLPAEEAKKLP 559
Query: 673 --DSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIR 727
+ +T ++ G+LP +++L+ +R+ K L+K P + L D R
Sbjct: 560 ADEYTVTPSGDHFILPHKKKGLLPRILEELLSARKNAKELLKNEKDPFKKAVL----DGR 615
Query: 728 QKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNY 778
Q ALK++ANS+YG G + ++ VT+ GRE+L TK +VE N +
Sbjct: 616 QLALKISANSVYGFTGARVGKLPCVEISRSVTSFGREMLDTTKKIVEERYTIANGYNHDA 675
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKY 837
VIYGDTDS+M+ V +G + E K + + + LD + VY LL+ KKKY
Sbjct: 676 VVIYGDTDSVMVKFGVPTVAEAMALGREASKEVTKHFIRPINLDFEKVYYPYLLMAKKKY 735
Query: 838 AALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRL 896
A L +K + KM ++KG++ VRRD L ++ ++L E+ +
Sbjct: 736 AGLFWTKPDIHDKM----DVKGLETVRRDTCLLVRNVVSTILKKLLIEKD---------I 782
Query: 897 QNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKL 956
+ E+ K + +DL + L++L ITK L+K+ +Y R + H ++A ++ N
Sbjct: 783 KQAEEYTKSVISDLLQNRLDLSMLVITKALSKS--QYKGR--VIHNELAQKMRARNPATA 838
Query: 957 KQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + Y++ + ++A + + L++N + +D YYL +Q+ + R+ +P+
Sbjct: 839 PNLGDRVPYVVIQGLKGAPIYEKAEDPLYVLEHN--ILLDTQYYLDKQLKAPLLRIFKPL 896
>gi|410982338|ref|XP_003997514.1| PREDICTED: DNA polymerase delta catalytic subunit isoform 3 [Felis
catus]
Length = 1124
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 234/502 (46%), Gaps = 78/502 (15%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N ME R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 528 VLVNAMEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMREGLLMP-----VVKTEGV 578
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGF-------------YDKFIILMDFNSLYPSIIQ 657
E Y+G V+EP KG+ YD I +DF+SLYPSI+
Sbjct: 579 ED-------------YTGATVIEPLKGYDPVSGWGCLPPRYYDVPIATLDFSSLYPSIMM 625
Query: 658 EYNICFTTI-------PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKA 709
+N+C+TT+ + + +D I T + + V G+LP ++ L+ +R++ KA
Sbjct: 626 AHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKA 685
Query: 710 LMKQPNLSSDLLMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILL 767
+ + +D L + D RQ ALK++ANS+YG G + ++ VT GR+++
Sbjct: 686 ELAK---ETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIE 742
Query: 768 NTKSLVEN---------LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQ 817
TK LVE+ + +V+YGDTDS+M V+ +G + + +
Sbjct: 743 KTKQLVESKYTVENGYGTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPPP 802
Query: 818 LELDIDGVYKYMLLLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGK 875
+ L+ + VY LL+ KK+YA L S + +M C KG++ VRRD L +
Sbjct: 803 IRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVT 858
Query: 876 FVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTD 935
+ ++L +D H + + +DL + ++ L ITK+LT+A +Y
Sbjct: 859 ASLRRLL---------IDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAG 909
Query: 936 RKALPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKID 994
++A HV++A R+ + GD + Y+I AA ++ + + +S L ID
Sbjct: 910 KQA--HVELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPID 966
Query: 995 VNYYLSQQIHPVVTRLLEPIEG 1016
YYL QQ+ + R+ EPI G
Sbjct: 967 TQYYLEQQLAKPLLRIFEPILG 988
>gi|7416107|dbj|BAA93703.1| DNA polymerase B3 [Sulfurisphaera ohwakuensis]
Length = 781
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 230/454 (50%), Gaps = 56/454 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I +T + G L + M R E+LL+ ++ + ++P+K+
Sbjct: 361 IELTRISGLPLDQLSMASVGHRVEWLLMREAYKYNELIPNKE------------------ 402
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R+ +Y GGLV+ P G +++ + ++DF+S+YPSI+ +YNI T+ ++ ++ +
Sbjct: 403 EREYESYEGGLVISPLPGIHEE-VYVLDFSSMYPSIMIKYNIGPDTLVKGECENCWVSPV 461
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+ G+ + ++KL++ R++VK LM++ D + D RQ+ALK+ AN+ Y
Sbjct: 462 GHKFRKEP--PGLYKNVLEKLIQERKEVKKLMEKTIDEYDKRVL-DARQRALKVMANAFY 518
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
G +G+ +R++++ A VTA GR+I+ ++ + + + VIYGDTDS+ + D +S
Sbjct: 519 GYMGWLGARWYSKEGAEAVTAWGRQIISDSAKIAKEKGFTVIYGDTDSIFVKGG-GDINS 577
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQEIKG 858
+ +I S+ LE+ ID +YK + + KK+YA L+ +GK+ +I G
Sbjct: 578 LI---TEISSKFG-----LEIKIDKIYKRVFFTENKKRYAGLT----EDGKI----DIVG 621
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+ VR DW LA + VI IL ++++ +++K + DL +
Sbjct: 622 FEAVRGDWCDLAKQVQTNVIELILKS---------GKVEDAIKYVKSVIFDLRRYNFRIE 672
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQR 978
L I K + K +EY D A PHV VA + + +G I Y+I + +
Sbjct: 673 DLIIWKTIDKNLDEY-DVTA-PHV-VAAKKAAKAGYLVSKGVKIGYVIVKGSGKISDKAE 729
Query: 979 AYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
Y + + KN KIDV YY+ +QI PV R+LE
Sbjct: 730 PYFLVKEKN----KIDVEYYIDKQIIPVALRILE 759
>gi|305662963|ref|YP_003859251.1| replicative DNA polymerase I [Ignisphaera aggregans DSM 17230]
gi|304377532|gb|ADM27371.1| replicative DNA polymerase I [Ignisphaera aggregans DSM 17230]
Length = 801
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 223/462 (48%), Gaps = 64/462 (13%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E+ L+ + + ++P N+ E
Sbjct: 369 IQLSSVTGIPLDQVGTASVGFRLEWFLIRIAYMRDELVP------NRIE----------- 411
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT- 678
R+ Y G +VLEPKKG ++ I ++DF+++YPSI+ +YNI P +++D +I
Sbjct: 412 -REYEPYRGAIVLEPKKGVHED-IAVLDFSAMYPSIMMKYNIG----PDTLVKDPEICKE 465
Query: 679 -LCEYLPEHQVDTGILPSEIKK-----LVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
C PE PS K LV++R+ V+ +K+ ++ S D RQ+ALK
Sbjct: 466 DKCFEAPETGYKFVKEPSAFFKIALEILVKARKIVREQLKKYSVDSIEYRVLDARQRALK 525
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
+ AN+ YG +G+ +R++ + A VT GRE + + NL VIYGDTDSL +
Sbjct: 526 ILANACYGYMGWVGARWYCRECAEAVTDFGRETIRKAIDIARNLGLAVIYGDTDSLFVKY 585
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMI 851
+ D + K + LE+ ID +Y+ + + KK+Y L+ +G++
Sbjct: 586 DKEKIDKLIKTVEDVLG--------LEIKIDKIYRRVFFTEAKKRYIGLT----DDGRI- 632
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR--LQNIHEHMKKIRTD 909
++ G + VR DW+++A E + +L ++D + ++ + ++K+R
Sbjct: 633 ---DVVGFEAVRGDWAEIAKELQEKTADIVLK-------TMDPKKAVEFVRNEIEKLRKG 682
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
+ G +P+ I K +TK +EY PHV VA + +++ GD I Y+I
Sbjct: 683 VSEGSIPIDGFIIWKTITKPLKEYE--VDAPHV-VAAKYLEKAGYRVEVGDKIGYVIIRG 739
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
+ R Y ++++ ID++YY+ QI P V R+L
Sbjct: 740 SGKISDRARPYINVDVRD-----IDIDYYIEHQIIPAVIRIL 776
>gi|119719310|ref|YP_919805.1| DNA polymerase II [Thermofilum pendens Hrk 5]
gi|119524430|gb|ABL77802.1| replicative DNA polymerase I [Thermofilum pendens Hrk 5]
Length = 794
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 232/459 (50%), Gaps = 59/459 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+++++ G L + R E+ L+ + ++P+ +++ GEET
Sbjct: 367 IQLSSLVGLPLDQVFAASVGNRVEWFLIRQAFVFNELVPN-----SRERGEET------- 414
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRMLQDSDIT 677
Y G +VL+PK G + K I ++DF+S+YP+I+ +YNI T P + S++
Sbjct: 415 ------YKGAIVLKPKPGVHKK-IAVLDFSSMYPNIMIKYNISPDTYVPPEEHVDPSEVW 467
Query: 678 TLCEY---LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
E +H G ++ L+E+RR+++ MK + S+ YD RQKA+K+
Sbjct: 468 VAPEVGHRFRKHP--PGFYRKVLESLLEARRRLREKMKTLDPRSEEYRIYDERQKAIKVI 525
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
N+ YG G+ +R++ + +A TA GRE++ T ++L +IYGDTDS+ + +
Sbjct: 526 TNATYGYSGWSMARWYKREVAEATTAWGRELIKATIKKAQSLGLSIIYGDTDSIFVQFDE 585
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICS 853
KIG ++ +L E+ +D VY+ + + KKKY L L++G++
Sbjct: 586 E------KIGRLVEYVEKEL--GFEIKLDKVYEKVFFTESKKKYCGL----LADGRV--- 630
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
++ G + VR DW++++ E + V+ +L E+ D + + + ++K T+L G
Sbjct: 631 -DLVGFEAVRGDWAEISKEIQERVVEIVLKEE--------DPWKAV-DFVRKTITELSEG 680
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
+PL L I K L+K +EY PHV VA L ++ +G I YI+ +
Sbjct: 681 RIPLEKLVIWKTLSKDLDEY--EVDAPHVVVARELKRLGY-RVGKGAKIGYIVVKGAGK- 736
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
+++A + +K+ ++D +YY+ +QI P R+LE
Sbjct: 737 -VSEKAKPLISVKSPD--EVDTDYYVKRQIVPAALRILE 772
>gi|428182790|gb|EKX51650.1| DNA polymerase delta catalytic subunit [Guillardia theta CCMP2712]
Length = 985
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 208/421 (49%), Gaps = 55/421 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDI-TTLCEYLP 684
+ G +V+EPKKGFY I +DF SLYPSI+ +N+C++T ++ D+ T + P
Sbjct: 458 FEGAIVIEPKKGFYSDPIATLDFASLYPSIMMAHNLCYST----LVSKEDLRTNKFNFTP 513
Query: 685 EH-------------QVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQK 729
E V GILP + +L+ +R++ KA +K+ ++D +M+ D RQ
Sbjct: 514 EQITVTPHGDTFVKPSVKKGILPEILDELLAARKRAKADLKK---ATDPIMKAVLDGRQL 570
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEV 780
ALK++ANS+YG G + +++ VTA GRE++ TK+ VE + V
Sbjct: 571 ALKVSANSVYGFTGAQVGKLPCLEISSSVTAFGREMIELTKAKVEAHYTVANGYKHDSVV 630
Query: 781 IYGDTDSLMISCNVND----YDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKK 835
+YGDTDS+MI N D K+ N + K ++L+ + VY LL+ KK
Sbjct: 631 VYGDTDSVMIKFGENRERWMIDETMKLALSAADFVNTSFVKPIKLEFEKVYYPYLLMNKK 690
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
+YAAL +N + KG++ VRRD L + IL ++ +
Sbjct: 691 RYAALL---WTNPDKFDKMDCKGIETVRRDNCGLVRTMVDTCLKTILMQRDPNAAA---- 743
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
E++K + DL V ++ L ITK L K+ E+ + A HV +A R+ +
Sbjct: 744 -----EYVKGVIRDLLMNKVDISELIITKALHKSEED--SKSAQAHVVLAARMKERDPNT 796
Query: 956 LK-QGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
GD + Y+I + A ++A + I L+NN L IDV +YL Q+ + RL EP
Sbjct: 797 APVLGDRVPYVIIKGPKGAKAFEKAEDPIFVLENN--LPIDVQHYLDHQLSQPILRLFEP 854
Query: 1014 I 1014
I
Sbjct: 855 I 855
>gi|324120702|dbj|BAJ78742.1| DNA polymerase delta catalytic subunit [Isonychia japonica]
Length = 1008
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 236/486 (48%), Gaps = 66/486 (13%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V L L G+ + LL E YV+P
Sbjct: 432 NYMEMARVTGVS---LLCLLTRGQQIKVVSQLLRKAKEHDYVIP---------------- 472
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------P 667
+G + G V+EPKKG+Y + I+ +DF+SLYPSI+ +N+C+TT+
Sbjct: 473 VYSVRGGNDEQFEGATVIEPKKGYYKQPIVTLDFSSLYPSIMMAHNLCYTTLLQPGTKEK 532
Query: 668 VRMLQDSDITTLCE--YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ-- 723
+ + D T E +L Q G+LP ++ L+ +R++ K +K+ +D L +
Sbjct: 533 LGLTSDQYTVTPNENCFLKASQ-RKGLLPEILESLLSARKKAKEDLKK---ETDPLRRKV 588
Query: 724 YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------- 775
D RQ ALK++ANS+YG G + ++ VTA GR ++ T+S VE
Sbjct: 589 LDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEQTRSEVEQKFCLANGY 648
Query: 776 -LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLK 833
+ VIYGDTDS+MI V D + ++G + +K K ++L+ + VY LL+
Sbjct: 649 AHDSTVIYGDTDSVMIKFGVEDLPTAMELGREAAEYVSSKFIKPIKLEFEKVYFPYLLIN 708
Query: 834 KKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSL 892
KK+YA L ++ KM C KG++ VRRD L + + +L E+ D ++
Sbjct: 709 KKRYAGLYYTRPDKYDKMDC----KGIETVRRDNCPLVANIMNTCLKMLLIERD-PDGAV 763
Query: 893 DDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTN 952
++K++ +DL + ++ L ITK+L K ++Y ++A HV++A + +
Sbjct: 764 --------RYVKEMISDLLCNRLDISQLVITKELAK--DDYKAKQA--HVELAEKXKKRD 811
Query: 953 SKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
K GD + Y+I + A ++ + I L+NN + ID +YYL Q+ + R+
Sbjct: 812 PGTAPKLGDRVPYVITAAAKNTPAYLKSEDPIYVLENN--VSIDTDYYLHNQLEKPLLRI 869
Query: 1011 LEPIEG 1016
PI G
Sbjct: 870 FSPILG 875
>gi|259145143|emb|CAY78407.1| Pol3p [Saccharomyces cerevisiae EC1118]
Length = 1097
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 222/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D + +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLNEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|332687549|emb|CBZ41215.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687551|emb|CBZ41216.1| catalytic subunit of DNA polymerase delta [Saccharomyces uvarum]
gi|332687553|emb|CBZ41217.1| catalytic subunit of DNA polymerase delta [Saccharomyces bayanus]
Length = 1097
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 222/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + ++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKGTVERLNFKLDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKNAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+KQ + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTADLKEAMDLGTEAAKYVSTLFKQPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDHFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALTFVRETID 875
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ + GD + Y
Sbjct: 876 ----DILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRRDGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VIT--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|451845686|gb|EMD58998.1| hypothetical protein COCSADRAFT_153806 [Cochliobolus sativus ND90Pr]
Length = 1115
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 214/419 (51%), Gaps = 47/419 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EPK+G+Y + + +DF SLYPSI+Q +N+C+TT ++M +D D +
Sbjct: 582 YEGATVIEPKRGYYKEPVATLDFASLYPSIMQAHNLCYTTWLDRQTVEKLKMKKDEDYIV 641
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLT 734
T + + G+L +++L+ +R++ K K+ + +D + + RQ A+K+T
Sbjct: 642 TPNGDMFCTAKTRKGLLTEILEELLSARKKAK---KELAVETDPFKKAVLNGRQLAMKVT 698
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G N + +A+ T+ GR+++ K+ VE + + EVIYGDT
Sbjct: 699 ANSVYGLTGATNGKLPCLAIASSTTSFGRQMIERAKAEVEAKYNIANGYSHDAEVIYGDT 758
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ + K+G + + +K K ++L+ + VY LL+ KK+YA L
Sbjct: 759 DSVMVKFGTTELAEAMKLGEEAANYVTSKFLKPIKLEFEKVYFPYLLINKKRYAGLY--- 815
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG++ VRRD +L Q + E S +D + E +K
Sbjct: 816 WTNPNKWDKMDTKGIETVRRDNCRLV---------QTVIETSLRMLLIDQDPEGAQEFVK 866
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEE-----YTDRKALPHVQVALRLNNTNSKKLKQ- 958
+ DL + ++ L ITK LTK ++ Y +++A HV++A R+ ++
Sbjct: 867 ETIADLLQNKIDMSNLVITKALTKQEDKDGKGGYANKQA--HVELAERMKKRDAGSAPAL 924
Query: 959 GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
GD ++Y++ T +++ + I L+NN L ID YYL Q+ + R+ EPI G
Sbjct: 925 GDRVAYVMVRAATGAKNFEKSEDPIYVLENN--LPIDTRYYLDNQLAKPLGRIFEPILG 981
>gi|326473539|gb|EGD97548.1| DNA polymerase family B [Trichophyton tonsurans CBS 112818]
Length = 1085
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 227/486 (46%), Gaps = 91/486 (18%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFL--LLHAFHEKSYVLPDKQYGKNKKEGEET 612
N E R+T V N L R ++ +F+ L E+ V+PD + N +
Sbjct: 533 NYTEMARVTGVPFNFLL-----ARGQQIKFISQLFRKALEQKLVIPDLKNDDNSNQ---- 583
Query: 613 GEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------ 666
Y G V+EP + +Y I +DF SLYPSIIQ +N+C+TT+
Sbjct: 584 ------------QYEGATVIEPVRDYYPVPIATLDFASLYPSIIQAHNLCYTTLLNKRTV 631
Query: 667 -PVRMLQDSD--ITTLCEYLPEHQVDTGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
+ + +D D +T + +V G+L +++L+ +R++ K A+ K P + L
Sbjct: 632 EKLGLEKDEDYIVTPNDDMFCTAKVRKGLLSQILEELLTARKRAKRELAVEKDPFKKAVL 691
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ RQ ALK++ANS+YG G N + +A+ T+ GR+++ TK VE
Sbjct: 692 ----NGRQLALKISANSVYGITGATNGKLPCLAIASSTTSYGRQMIEKTKDEVEARYTIS 747
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQLELDIDGVYKYML 830
+ + +VIYGDTDS+M+ D K+G + +K K ++L+ + VY L
Sbjct: 748 NGYSHDAKVIYGDTDSVMVKFGTTDLAEAMKLGEEAAGFVSSKFMKPIKLEFEKVYYPYL 807
Query: 831 LLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY 890
L+ KK+YA L +N + KG++ VRRD L + V+++IL
Sbjct: 808 LINKKRYAGLY---WTNPVKYDKMDTKGIETVRRDNCLLVQTVIETVLNKIL-------- 856
Query: 891 SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNN 950
+D + ++K I +DL V ++ L ITK LTK EEYT ++A HV++ R N
Sbjct: 857 -IDRNVNGAETYVKNIISDLLQNKVDMSKLVITKALTK--EEYTGKQA--HVELVERAKN 911
Query: 951 TNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
Y ED I L+NN + ID YYL Q+ +TR+
Sbjct: 912 -------------YEKSED-----------PIYVLENN--IPIDTRYYLENQLAKPLTRI 945
Query: 1011 LEPIEG 1016
EPI G
Sbjct: 946 FEPILG 951
>gi|365766444|gb|EHN07940.1| Pol3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1097
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 222/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D + +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLNEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|302349152|ref|YP_003816790.1| DNA polymerase 2 [Acidilobus saccharovorans 345-15]
gi|302329564|gb|ADL19759.1| DNA polymerase 2 [Acidilobus saccharovorans 345-15]
Length = 802
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 207/417 (49%), Gaps = 54/417 (12%)
Query: 606 KKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT 665
+K GE + + R+ Y+G +VLEPK G + +L DF S+YPSI+ +YN+
Sbjct: 403 RKLGELVPNRAEEETRELETYTGAIVLEPKPGIHHNVAVL-DFASMYPSIMVKYNVG--- 458
Query: 666 IPVRMLQDSDITTLCEYLPE-----HQV---DTGILPSEIKKLVESRRQVKALMKQPNLS 717
P +L++ + CE + E H+ +++ ++ R +VKA MK+
Sbjct: 459 -PDTLLKEGEA---CERVNEAPGVRHRFCADRDAFFKRVLERFLKWRAEVKAAMKKYPEG 514
Query: 718 SDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN 777
S + RQ+A+K+ AN+ YG +G+ +R++ + A VTA GR+++ SL +L
Sbjct: 515 SPQYRLLNERQRAIKVLANASYGYMGWAGARWYCRQCAESVTAWGRDLITRAASLARSLG 574
Query: 778 YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELD--IDGVYKYMLLLK-K 834
+V YGDTDSL + ND + V K+ + K LE D ID VY + + K
Sbjct: 575 LKVYYGDTDSLFVE---NDPEKVEKV-------IEGITKGLEFDIKIDKVYSRVFFTEAK 624
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L+ GK+ +I G + VR DWS LA + V +L D
Sbjct: 625 KRYAGLT----PEGKI----DIVGFEAVRGDWSDLAKDTQAKVAEIVLRS---------D 667
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK 954
++ ++++++ DL NG V + L I K LTK+ ++Y PHV VA ++
Sbjct: 668 DVRKAVDYVRQVINDLRNGKVEVEKLIIWKTLTKSVDKY--EAEAPHVYVA-KMMEKLGF 724
Query: 955 KLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
K+ G I Y+I + + R Y + + ++ IDVNYY+ +QI P R+L
Sbjct: 725 KIDVGSKIGYVIVKGDGPLSRRARPYFLVKPQD-----IDVNYYIDKQIVPAALRIL 776
>gi|403213728|emb|CCK68230.1| hypothetical protein KNAG_0A05660 [Kazachstania naganishii CBS 8797]
Length = 1095
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 211/419 (50%), Gaps = 58/419 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT+ + + +D D I
Sbjct: 585 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERMNLKKDEDYII 644
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMK--QPNLSSDLLMQYDIRQKALKLT 734
T +Y ++ GILP + +L+ +R + K ++ + + D+L + RQ ALK++
Sbjct: 645 TPNGDYFVTDKLRRGILPIILDELISARSRAKKDLRDEKDSFKRDVL---NGRQLALKIS 701
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VT+ GR++++ TK+ V+ + V+YGDT
Sbjct: 702 ANSVYGFTGATVGKLPCLAISSSVTSFGRDMIMTTKNAVQKKYSIENGYKHDAVVVYGDT 761
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ ND V +G + + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 762 DSVMVKFGSNDLKEVMDLGTEAAAYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 818
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS------YTDYSLDDRLQN 898
+N + KG+ VRRD L S V+ +IL E++ + +++D LQN
Sbjct: 819 WTNPDHYDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIERNVPGALDFVKQTINDILQN 878
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
R D+ + TL AP YT+ + PH ++ R+ +
Sbjct: 879 --------RVDISKLIISKTL---------AP-NYTNPQ--PHAVLSDRMKKRDGMGPNV 918
Query: 959 GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
GD + Y+I G ++ RA + + L++N L++D YYL+ Q+ + ++ PI G
Sbjct: 919 GDRVDYVIT--GGNDKLYNRAEDPLYVLEHN--LQVDSKYYLTNQLQNPIISIVAPIIG 973
>gi|14521919|ref|NP_127396.1| DNA polymerase I [Pyrococcus abyssi GE5]
gi|327507711|sp|P0CL77.1|DPOL_PYRAB RecName: Full=DNA polymerase 1; AltName: Full=Pab polymerase
gi|5459139|emb|CAB50625.1| polI DNA polymerase I [Pyrococcus abyssi GE5]
gi|380742558|tpe|CCE71192.1| TPA: DNA polymerase I [Pyrococcus abyssi GE5]
Length = 771
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 205/397 (51%), Gaps = 45/397 (11%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TL 679
+Y GG V EP+KG ++ I+ +DF SLYPSII +N+ T+ ++ D+
Sbjct: 384 SYEGGYVKEPEKGLWEG-IVSLDFRSLYPSIIITHNVSPDTLNRENCKEYDVAPQVGHRF 442
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTANS 737
C+ P G +PS + L+E R+++K MK+ + LL D RQ+A+K+ ANS
Sbjct: 443 CKDFP------GFIPSLLGNLLEERQKIKKRMKESKDPVEKKLL---DYRQRAIKILANS 493
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
YG G+ +R++ + A VTA GR+ + + +E+ ++V+Y DTD L + +
Sbjct: 494 YYGYYGYAKARWYCKECAESVTAWGRQYIDLVRRELESRGFKVLYIDTDGLYATIPGAKH 553
Query: 798 DSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
+ + + + N KL LEL+ +G Y + KKKYA + GK++
Sbjct: 554 EEIKEKALKFVEYINSKLPGLLELEYEGFYARGFFVTKKKYALID----EEGKIVT---- 605
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
+G+++VRRDWS++A E V+ IL ++D+ ++ + E +K L +P
Sbjct: 606 RGLEIVRRDWSEIAKETQAKVLEAILKHG-----NVDEAVKIVKEVTEK----LSKYEIP 656
Query: 917 LTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEA 974
L I +Q+T+ EY KA+ PHV VA RL K+K G I YI+ DG
Sbjct: 657 PEKLVIYEQITRPLSEY---KAIGPHVAVAKRL-AAKGVKVKPGMVIGYIVLRGDG---P 709
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
++RA IEE + K K D YY+ Q+ P V R+L
Sbjct: 710 ISKRAIAIEEF-DPKKHKYDAEYYIENQVLPAVERIL 745
>gi|207347015|gb|EDZ73334.1| YDL102Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1097
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|323355835|gb|EGA87648.1| Pol3p [Saccharomyces cerevisiae VL3]
Length = 1097
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|401407254|ref|XP_003883076.1| DNA polymerase, related [Neospora caninum Liverpool]
gi|325117492|emb|CBZ53044.1| DNA polymerase, related [Neospora caninum Liverpool]
Length = 1219
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 229/479 (47%), Gaps = 61/479 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+ ++ V G L+ L G+ + LL E +Y++P K+ G
Sbjct: 650 VEMSRVTGTPLNFLLTRGQQIKVTAQLLRKCKELNYLVP-----VVKRTG---------- 694
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRMLQDSD 675
G Y G VLEPKKGFYDK I +DF SLYPSI+ +NIC++T+ + + D
Sbjct: 695 GDNSVQYEGATVLEPKKGFYDKPIATLDFASLYPSIMIAHNICYSTLVAASEAHKMTNPD 754
Query: 676 ITTLCEYLPEHQ-----VDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQ 728
T+ LP H+ V G+LP +++L+ +R KA K+ + D + + + RQ
Sbjct: 755 DVTVTTTLPPHKFVKAHVRRGVLPMIVEELIAAR---KAARKEMAAAKDEMTKQVLNGRQ 811
Query: 729 KALKLTANSM-YGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NY 778
ALK++ANS+ + +A +T GR+++ T+ VE + N
Sbjct: 812 LALKISANSVYGYTGTTTGGQLPCLEVATTITCFGRDMIDFTRREVEKMFCKDKTRACNA 871
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKY 837
VIYGDTDS+M+ K+G + + K K + L+ + VY LL+ KK+Y
Sbjct: 872 TVIYGDTDSVMVDFGDFSIAEAMKLGEEAAQALSAKFTKPIRLEFEKVYCPFLLMNKKRY 931
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
A L ++ I S KG++ VRRD+S L V+ ++L +D ++
Sbjct: 932 AGLLYTRPEKYDKIDS---KGIETVRRDFSLLVQTMADTVLRKML---------IDKDVE 979
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
E+ + +L + L+LL TK L K +Y R LPHV++A +L ++
Sbjct: 980 AAKEYTRTKVAELLQNKIDLSLLVQTKSLGKM--DYDTR--LPHVELAKKLRKRDAGTAP 1035
Query: 958 Q-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD +SY++ + +A +RA + + L++N L ID +YL + I + R+ E +
Sbjct: 1036 SVGDRVSYVVIQGSKGQAQYERAEDPLYVLEHN--LPIDTQHYL-EGIKKPLCRIFEGV 1091
>gi|151941901|gb|EDN60257.1| DNA polymerase III catalytic (delta) subunit [Saccharomyces
cerevisiae YJM789]
Length = 1097
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|402550525|pdb|4FM2|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase (Triple Mutant)
Bound To A Dsdna, In Edition Mode
Length = 793
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 205/397 (51%), Gaps = 45/397 (11%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TL 679
+Y GG V EP+KG ++ I+ +DF SLYPSII +N+ T+ ++ D+
Sbjct: 406 SYEGGYVKEPEKGLWEG-IVSLDFRSLYPSIIITHNVSPDTLNRENCKEYDVAPQVGHRF 464
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTANS 737
C+ P G +PS + L+E R+++K MK+ + LL D RQ+A+K+ ANS
Sbjct: 465 CKDFP------GFIPSLLGNLLEERQKIKKRMKESKDPVEKKLL---DYRQRAIKILANS 515
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
YG G+ +R++ + A VTA GR+ + + +E+ ++V+Y DTD L + +
Sbjct: 516 YYGYYGYAKARWYCKECAESVTAWGRQYIDLVRRELESRGFKVLYIDTDGLYATIPGAKH 575
Query: 798 DSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
+ + + + N KL LEL+ +G Y + KKKYA + GK++
Sbjct: 576 EEIKEKALKFVEYINSKLPGLLELEYEGFYARGFFVTKKKYALID----EEGKIVT---- 627
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
+G+++VRRDWS++A E V+ IL ++D+ ++ + E +K L +P
Sbjct: 628 RGLEIVRRDWSEIAKETQAKVLEAILKHG-----NVDEAVKIVKEVTEK----LSKYEIP 678
Query: 917 LTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEA 974
L I +Q+T+ EY KA+ PHV VA RL K+K G I YI+ DG
Sbjct: 679 PEKLVIYEQITRPLSEY---KAIGPHVAVAKRL-AAKGVKVKPGMVIGYIVLRGDGP--- 731
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
++RA IEE + K K D YY+ Q+ P V R+L
Sbjct: 732 ISKRAIAIEEF-DPKKHKYDAEYYIENQVLPAVERIL 767
>gi|402550496|pdb|4FLT|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A Dsdna,
In Edition Mode
gi|402550499|pdb|4FLU|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A Dsdna,
In Edition Mode
gi|402550502|pdb|4FLV|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A Dsdna,
In Edition Mode
gi|402550505|pdb|4FLW|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A Dsdna,
In Edition Mode
gi|402550510|pdb|4FLX|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A Dsdna,
In Edition Mode
gi|402550513|pdb|4FLY|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A Dsdna,
In Edition Mode
gi|402550514|pdb|4FLZ|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A Dsdna,
In Edition Mode
gi|402550519|pdb|4FM0|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A Dsdna,
In Edition Mode
gi|402550520|pdb|4FM1|A Chain A, Pyrococcus Abyssi B Family Dna Polymerase Bound To A Dsdna,
In Edition Mode
Length = 793
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 205/397 (51%), Gaps = 45/397 (11%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TL 679
+Y GG V EP+KG ++ I+ +DF SLYPSII +N+ T+ ++ D+
Sbjct: 406 SYEGGYVKEPEKGLWEG-IVSLDFRSLYPSIIITHNVSPDTLNRENCKEYDVAPQVGHRF 464
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTANS 737
C+ P G +PS + L+E R+++K MK+ + LL D RQ+A+K+ ANS
Sbjct: 465 CKDFP------GFIPSLLGNLLEERQKIKKRMKESKDPVEKKLL---DYRQRAIKILANS 515
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
YG G+ +R++ + A VTA GR+ + + +E+ ++V+Y DTD L + +
Sbjct: 516 YYGYYGYAKARWYCKECAESVTAWGRQYIDLVRRELESRGFKVLYIDTDGLYATIPGAKH 575
Query: 798 DSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
+ + + + N KL LEL+ +G Y + KKKYA + GK++
Sbjct: 576 EEIKEKALKFVEYINSKLPGLLELEYEGFYARGFFVTKKKYALID----EEGKIVT---- 627
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
+G+++VRRDWS++A E V+ IL ++D+ ++ + E +K L +P
Sbjct: 628 RGLEIVRRDWSEIAKETQAKVLEAILKHG-----NVDEAVKIVKEVTEK----LSKYEIP 678
Query: 917 LTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEA 974
L I +Q+T+ EY KA+ PHV VA RL K+K G I YI+ DG
Sbjct: 679 PEKLVIYEQITRPLSEY---KAIGPHVAVAKRL-AAKGVKVKPGMVIGYIVLRGDG---P 731
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
++RA IEE + K K D YY+ Q+ P V R+L
Sbjct: 732 ISKRAIAIEEF-DPKKHKYDAEYYIENQVLPAVERIL 767
>gi|392300015|gb|EIW11106.1| Pol3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1097
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|330443503|ref|NP_010181.2| Pol3p [Saccharomyces cerevisiae S288c]
gi|341940645|sp|P15436.4|DPOD_YEAST RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|4191|emb|CAA43922.1| DNA polymerase III catalytic subunit [Saccharomyces cerevisiae]
gi|329138870|tpg|DAA11758.2| TPA: Pol3p [Saccharomyces cerevisiae S288c]
Length = 1097
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|365983526|ref|XP_003668596.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
gi|343767363|emb|CCD23353.1| hypothetical protein NDAI_0B03180 [Naumovozyma dairenensis CBS 421]
Length = 1107
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 208/401 (51%), Gaps = 46/401 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT+ +++ +D + I
Sbjct: 597 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLKLKKDEEYII 656
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
+ +Y +V GILP + +L+++R++ K +K D+L + RQ ALK++
Sbjct: 657 SPNGDYFVTDKVRRGILPIILDELIQARKRAKKDLKNETDPFKRDVL---NGRQLALKIS 713
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE-----NLNYE----VIYGDT 785
ANS+YG G + +++ VTA GR++++ TK+ VE N Y V+YGDT
Sbjct: 714 ANSVYGFTGATVGKLPCLAISSSVTAFGRDMIMTTKNAVEEKYTKNKGYADDAIVVYGDT 773
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D ++G + + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 774 DSVMVKFGTTDLKEAMRLGTEAAAFVSTLFKHPINLEFEKCYFPYLLINKKRYAGLY--- 830
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E++ + + + +K
Sbjct: 831 WTNPDKFDRLDQKGLASVRRDSCSLVSIVMNKVLKKILIERN---------VPSALDFVK 881
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A RL + GD + Y
Sbjct: 882 ATINDILHNNVDISKLIISKTL--AP-NYTNPQ--PHAVLAARLKKRDGMGPNVGDRVDY 936
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIH 1004
+I G ++ RA + + L++N L+ID YYL+ Q+
Sbjct: 937 VIT--GGNDKLYNRAEDPLYVLEHN--LQIDSKYYLNNQLQ 973
>gi|118400060|ref|XP_001032353.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89286694|gb|EAR84690.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 1124
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 176/624 (28%), Positives = 278/624 (44%), Gaps = 131/624 (20%)
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---PVRM 670
E ++G+G K + G VL+PKKGFYDK I +DF SLYPSI+ +N+C++T+ V M
Sbjct: 566 ERSQGQGDK---FEGAFVLQPKKGFYDKPIATLDFASLYPSIMMAHNLCYSTLISKNVAM 622
Query: 671 LQDSDITTLC---EYLPEHQVDTGILPSEIKKLVESRRQVK-ALMKQPNLSSDLLMQYDI 726
+ D TL +Y + V GILP +K L+ +R++ K L K+ + ++ D
Sbjct: 623 SMNKDDYTLTPHGDYFAKPHVRQGILPDILKDLLAARKKAKNELAKETDPLRKAVL--DG 680
Query: 727 RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN-------LNY- 778
RQ ALK++ANS+YG G + +++ VT+ GR+++ T+ V N NY
Sbjct: 681 RQLALKISANSVYGFTGAQVGQLPCLEISSSVTSFGRQMIEATRDFVLNHYNKANGYNYD 740
Query: 779 -EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNK--LYKQLELDIDGVYKYMLLLKKK 835
+VIYGDTDS+M+ + + K G + +K ++L+ + VY LL+ KK
Sbjct: 741 SDVIYGDTDSVMVKFGCDSIEEAMKYGKEAAEMISKKLFINPIKLEFEKVYYPYLLISKK 800
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
+YA +K I + KG++ VRRD Q E + IL E D
Sbjct: 801 RYAGCFYTKPDKYDKI---DTKGMENVRRDNCQFIREMMNTCLRYILVEHK------QDG 851
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTK-------------------------AP 930
+Q + +K +DL V ++ L ITK LTK +
Sbjct: 852 VQRSIQFIKGCISDLYQNKVDISKLVITKSLTKKSADDDEGEEDGKKGSSHNNKAKEPSA 911
Query: 931 EEYTDRKALPHVQVALRLNNTNSKKLK-QGDTISYIICEDGTSEAATQRAYNIEELKN-- 987
+Y ++A HV++A ++ + GD I Y+I A + A N E++++
Sbjct: 912 NQYKGKQA--HVELAKKMAKRDPGSAPCIGDRIPYVIV------AGAKSAKNYEKVEDPI 963
Query: 988 ---NSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGLDTSLYRSQIKESIQQS 1044
+ + +D +YY+ +QI +TR+ I D V D+ Y K Q
Sbjct: 964 YVLENDIPLDYDYYIEKQIKNPITRIYSHI--IDNV--------DSLFYGEHTKNRYQPK 1013
Query: 1045 EENILGVGEAEEVKYQFCDKFEFTCMNPSCKQVNTVEAPTRLSTHGVVFVLDECI--NPE 1102
+ G+G +F K E +C+ C QVN G V D C+ NP+
Sbjct: 1014 VNSGHGLG-------KFIVKKE-SCLQCKC-QVN-----------GKQPVCDNCLEKNPQ 1053
Query: 1103 CKVPPYTYLPHLINKLSQDMNKYIVKYYEGWLKC--------EDPGCSDLTRRCPLGLKT 1154
+ YT +I S + +Y + W +C E CS+ R CP+
Sbjct: 1054 RLIDIYT--EKIIQHQSIE-----YQYNQLWTQCQRCQGSLHEQVICSN--RDCPI---- 1100
Query: 1155 RLCTTCHKYKLHRVYTELQLYQQL 1178
YK ++ T+L QQL
Sbjct: 1101 -------YYKRTKLQTDLSRSQQL 1117
>gi|1495740|emb|CAA90888.1| DNA-dependent DNA polymerase [Pyrococcus abyssi]
Length = 771
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 205/397 (51%), Gaps = 45/397 (11%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TL 679
+Y GG V EP+KG ++ I+ +DF SLYPSII +N+ T+ ++ D+
Sbjct: 384 SYEGGYVNEPEKGLWEG-IVSLDFRSLYPSIIITHNVSPDTLNRENCKEYDVAPQVGHRF 442
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTANS 737
C+ P G +PS + L+E R+++K MK+ + LL D RQ+A+K+ ANS
Sbjct: 443 CKDFP------GFIPSLLGNLLEERQKIKKRMKESKDPVEKKLL---DYRQRAIKILANS 493
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
YG G+ +R++ + A VTA GR+ + + +E+ ++V+Y DTD L + +
Sbjct: 494 YYGYYGYAKARWYCKECAESVTAWGRQYIDLVRRELESRGFKVLYIDTDGLYATIPGAKH 553
Query: 798 DSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
+ + + + N KL LEL+ +G Y + KKKYA + GK++
Sbjct: 554 EEIKEKALKFVEYINSKLPGLLELEYEGFYARGFFVTKKKYALID----EEGKIVT---- 605
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
+G+++VRRDWS++A E V+ IL ++D+ ++ + E +K L +P
Sbjct: 606 RGLEIVRRDWSEIAKETQAKVLEAILKHG-----NVDEAVKIVKEVTEK----LSKYEIP 656
Query: 917 LTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEA 974
L I +Q+T+ EY KA+ PHV VA RL K+K G I YI+ DG
Sbjct: 657 PEKLVIYEQITRPLSEY---KAIGPHVAVAKRL-AAKGVKVKPGMVIGYIVLXGDG---P 709
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
++RA IEE + K K D YY+ Q+ P V R+L
Sbjct: 710 ISKRAIAIEEF-DPKKHKYDAEYYIENQVLPAVERIL 745
>gi|78191525|gb|ABB29977.1| DNA-directed polymerase delta 1 [Homo sapiens]
Length = 1133
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 234/497 (47%), Gaps = 55/497 (11%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V +LSR G + + LL A HE + K G G
Sbjct: 528 VLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHEGLLMPVVKSEGGEDYTGA 584
Query: 611 ETGEANKG---KGRKKAAYSGGLVLEPKKG-----FYDKFIILMDFNSLYPSIIQEYNIC 662
KG + R AA+ L L P +G +YD I + F+SLYPSI+ +N+C
Sbjct: 585 TVIGPLKGVRPQDRAGAAWEL-LALTPGRGCSPPRYYDVPIATLGFSSLYPSIMMAHNLC 643
Query: 663 FTTI-------PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQP 714
+TT+ + + +D I T + + V G+LP ++ L+ +R++ KA + +
Sbjct: 644 YTTLLRPGTAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK- 702
Query: 715 NLSSDLLMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSL 772
+D L + D RQ LK++ANS+YG G + ++ VT GR+++ TK L
Sbjct: 703 --ETDPLRRQVLDGRQLGLKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQL 760
Query: 773 VE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDI 822
VE + + +V+YGDTDS+M V+ +G + + + + L+
Sbjct: 761 VESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEF 820
Query: 823 DGVYKYMLLLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQ 880
+ VY LL+ KK+YA L S + +M C KG++ VRRD L + + +
Sbjct: 821 EKVYFPYLLISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRR 876
Query: 881 ILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALP 940
+L +D + H + + +DL + ++ L ITK+LT+A +Y ++A
Sbjct: 877 LL---------IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKELTRAASDYAGKQA-- 925
Query: 941 HVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYL 999
HV++A R+ + GD + Y+I AA ++ + + +S L ID YYL
Sbjct: 926 HVELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYL 984
Query: 1000 SQQIHPVVTRLLEPIEG 1016
QQ+ + R+ EPI G
Sbjct: 985 EQQLAKPLLRIFEPILG 1001
>gi|256274101|gb|EEU09012.1| Pol3p [Saccharomyces cerevisiae JAY291]
Length = 1097
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|366990559|ref|XP_003675047.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
gi|342300911|emb|CCC68676.1| hypothetical protein NCAS_0B05920 [Naumovozyma castellii CBS 4309]
Length = 1099
Score = 150 bits (379), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 207/401 (51%), Gaps = 46/401 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT+ +++ +D D I
Sbjct: 589 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLKLTKDEDYVI 648
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y ++ GILP + +L+ +R++ K +K D+L + RQ ALK++
Sbjct: 649 TPNGDYFVTSKIRRGILPIILDELINARKRAKKDLKNEKDPFKRDVL---NGRQLALKIS 705
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL-----NYE----VIYGDT 785
ANS+YG G + +++ VT+ GRE+++ TK+ V++ YE V+YGDT
Sbjct: 706 ANSVYGFTGATVGKLPCLAISSSVTSFGREMIMLTKNAVQDKYSKANGYENDAIVVYGDT 765
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ ND +G + + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 766 DSVMVKFGTNDLKEAMALGTEAAAYVSTLFKNPINLEFEKAYFPYLLINKKRYAGLY--- 822
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E++ + E +K
Sbjct: 823 WTNPDKYDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIERN---------VNGALEFVK 873
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
K D+ + V ++ L I+K L AP Y + + PH ++ R+ + GD + Y
Sbjct: 874 KTIDDILHNRVDISKLIISKTL--AP-NYVNPQ--PHAVLSERMKKRDGMGPNVGDRVDY 928
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIH 1004
+I G ++ RA + + L++N ++ID YYL+ Q+
Sbjct: 929 VIT--GGNDKLYNRAEDPLYVLEHN--IQIDSKYYLTNQLQ 965
>gi|1199547|emb|CAA64911.1| CDC2 [Saccharomyces cerevisiae]
gi|1431142|emb|CAA98669.1| CDC2 [Saccharomyces cerevisiae]
Length = 1097
Score = 150 bits (379), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 221/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|74507331|sp|Q9HH06.1|DPOL_PYRGL RecName: Full=DNA polymerase
gi|10799899|emb|CAC12849.1| DNA polymerase [Pyrococcus glycovorans]
Length = 775
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 201/397 (50%), Gaps = 42/397 (10%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT-----L 679
+Y+GG V EP+KG ++ + L DF SLYPSII +N+ T+ ++ D+
Sbjct: 384 SYAGGYVKEPEKGLWEGLVSL-DFRSLYPSIIITHNVSPDTLNREGCREYDVAPEVKHKF 442
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
C+ P G +PS +K+L++ R+++K MK + M D RQ+A+K+ ANS Y
Sbjct: 443 CKDFP------GFIPSLLKRLLDERQEIKRKMKASKDPIEKKM-LDYRQRAIKILANSYY 495
Query: 740 GCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
G G+ +R++ + A VTA GRE I K L E ++V+Y DTD L + +
Sbjct: 496 GYYGYAKARWYCKECAESVTAWGREYIEFVRKELEEKFGFKVLYIDTDGLYATIPGAKPE 555
Query: 799 SVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
+ + + N KL LEL+ +G Y + KKKYA + GK+I +
Sbjct: 556 EIKRKALEFVEYINAKLPGLLELEYEGFYVRGFFVTKKKYALID----EEGKIIT----R 607
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+++VRRDWS++A E V+ IL + ++ + +K++ L +P
Sbjct: 608 GLEIVRRDWSEIAKETQAKVLEAILKHGN---------VEEAVKIVKEVTEKLSKYEIPP 658
Query: 918 TLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEAA 975
L I +Q+T+ EY KA+ PHV VA RL K++ G I YI+ DG
Sbjct: 659 EKLVIYEQITRPLHEY---KAIGPHVAVAKRL-AARGVKVRPGMVIGYIVLRGDG---PI 711
Query: 976 TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
++RA EE + K K D YY+ Q+ P V R+LE
Sbjct: 712 SKRAILAEEF-DPRKHKYDAEYYIENQVLPAVLRILE 747
>gi|436495|gb|AAA67131.1| DNA polymerase [Pyrococcus sp.]
Length = 775
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 201/397 (50%), Gaps = 42/397 (10%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TL 679
+Y+GG V EP+KG ++ + L DF SLYPSII +N+ T+ ++ D+
Sbjct: 384 SYAGGYVKEPEKGLWEGLVSL-DFRSLYPSIIITHNVSPDTLNREGCREYDVAPEVGHKF 442
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
C+ P G +PS +K+L++ R+++K MK + M D RQ+A+K+ ANS Y
Sbjct: 443 CKDFP------GFIPSLLKRLLDERQEIKRKMKASKDPIEKKM-LDYRQRAIKILANSYY 495
Query: 740 GCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
G G+ +R++ + A VTA GRE I K L E ++V+Y DTD L + +
Sbjct: 496 GYYGYAKARWYCKECAESVTAWGREYIEFVRKELEEKFGFKVLYIDTDGLYATIPGAKPE 555
Query: 799 SVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
+ K + N KL LEL+ +G Y + KKKYA + GK+I +
Sbjct: 556 EIKKKALEFVDYINAKLPGLLELEYEGFYVRGFFVTKKKYALID----EEGKIIT----R 607
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+++VRRDWS++A E V+ IL + ++ + +K++ L +P
Sbjct: 608 GLEIVRRDWSEIAKETQAKVLEAILKHGN---------VEEAVKIVKEVTEKLSKYEIPP 658
Query: 918 TLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEAA 975
L I +Q+T+ EY KA+ PHV VA RL K++ G I YI+ DG
Sbjct: 659 EKLVIYEQITRPLHEY---KAIGPHVAVAKRL-AARGVKVRPGMVIGYIVLRGDG---PI 711
Query: 976 TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
++RA EE + K K D YY+ Q+ P V R+LE
Sbjct: 712 SKRAILAEEF-DLRKHKYDAEYYIENQVLPAVLRILE 747
>gi|7288074|emb|CAB81809.1| DNA polymerase [Pyrococcus glycovorans]
Length = 775
Score = 150 bits (378), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 200/397 (50%), Gaps = 42/397 (10%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT-----L 679
+Y+GG V EP+KG ++ + L DF SLYPSII +N+ T+ + D+
Sbjct: 384 SYAGGYVKEPEKGLWEGLVSL-DFRSLYPSIIITHNVSPDTLNREGCMEYDVAPEVKHKF 442
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
C+ P G +PS +K+L++ R+++K MK + M D RQ+A+K+ ANS Y
Sbjct: 443 CKDFP------GFIPSLLKRLLDERQEIKRRMKASKDPIEKKM-LDYRQRAIKILANSYY 495
Query: 740 GCLGFPNSRFFAQPLAALVTAKGRE-ILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYD 798
G G+ +R++ + A VTA GRE I K L E ++V+Y DTD L + +
Sbjct: 496 GYYGYAKARWYCKECAESVTAWGREYIEFVRKELEEKFGFKVLYIDTDGLYATIPGAKPE 555
Query: 799 SVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIK 857
+ + + N KL LEL+ +G Y + KKKYA + GK+I +
Sbjct: 556 EIKRKALEFVEYINAKLPGLLELEYEGFYVRGFFVTKKKYALID----EEGKIIT----R 607
Query: 858 GVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPL 917
G+++VRRDWS++A E V+ IL + ++ + +K++ L +P
Sbjct: 608 GLEIVRRDWSEIAKETQAKVLEAILKHGN---------VEEAVKIVKEVTEKLSKYEIPP 658
Query: 918 TLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEAA 975
L I +Q+T+ EY KA+ PHV VA RL K++ G I YI+ DG
Sbjct: 659 EKLVIYEQITRPLHEY---KAIGPHVAVAKRL-AARGVKVRPGMVIGYIVLRGDG---PI 711
Query: 976 TQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
++RA EE + K K D YY+ Q+ P V R+LE
Sbjct: 712 SKRAILAEEF-DPRKHKYDAEYYIENQVLPAVLRILE 747
>gi|444728684|gb|ELW69130.1| DNA polymerase delta catalytic subunit [Tupaia chinensis]
Length = 544
Score = 149 bits (377), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 203/417 (48%), Gaps = 46/417 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSDI-T 677
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+ + + D I T
Sbjct: 18 YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTADQFIKT 77
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLTA 735
+ + V G+LP ++ L+ +R++ KA + + +D L + D RQ ALK++A
Sbjct: 78 PTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETDPLRRQVLDGRQLALKVSA 134
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYG-DTDSLMISCNV 794
NS+YG G R ++ VT GR+++ TK LVE Y V G D+ + C
Sbjct: 135 NSVYGFTGAQVGRLPCLEISQSVTGFGRQMIEKTKQLVEA-KYTVGNGYSADAKVRGCPA 193
Query: 795 NDYDSVFKIGNQIKSECNKLYKQ------------LELDIDGVYKYMLLLKKKKYAALSI 842
YD + G +E L ++ + L+ + VY LL+ KK+YA L
Sbjct: 194 TPYDGPDRFGVSSVAEAMALGREAADWVSGHFPPPIRLEFEKVYFPYLLISKKRYAGLLF 253
Query: 843 SKL--SNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
S ++ +M C KG++ VRRD L + + +L +D
Sbjct: 254 SSRPDTHDRMDC----KGLEAVRRDNCPLVANLVTASLRHLL---------IDRDPAGAV 300
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-G 959
H + + +DL + ++ L ITK+LT+A +Y ++A HV++A R+ + G
Sbjct: 301 AHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERMRKRDPGSAPSLG 358
Query: 960 DTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
D + Y+I AA ++ + + +S L ID YYL QQ+ + R+ EPI G
Sbjct: 359 DRVPYVIIGAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAQPLLRIFEPILG 414
>gi|148690787|gb|EDL22734.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_f [Mus musculus]
Length = 964
Score = 149 bits (377), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 215/452 (47%), Gaps = 64/452 (14%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +L+R G+ + LL + ++P K EG
Sbjct: 526 VLVNNVEMARVTGVPLGYLLTR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 576
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 577 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 623
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 624 AAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 680
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 681 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVE 740
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 741 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 800
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ KM C KG++ VRRD L + + +IL
Sbjct: 801 LISKKRYAGLLFSSRSDAHDKMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 850
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 851 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 905
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRA 979
+ GD + Y+I AA ++
Sbjct: 906 RKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKS 937
>gi|149056046|gb|EDM07477.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
gi|149056047|gb|EDM07478.1| polymerase (DNA directed), delta 1, catalytic subunit, isoform
CRA_d [Rattus norvegicus]
Length = 964
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 215/452 (47%), Gaps = 64/452 (14%)
Query: 552 VQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGE 610
V N +E R+T V G +LSR G+ + LL + ++P K EG
Sbjct: 524 VLVNNVEMARVTGVPLGYLLSR----GQQVKVVSQLLRQAMRQGLLMP-----VVKTEGG 574
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI---- 666
E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 575 ED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPG 621
Query: 667 ---PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
+ + D I T + + V G+LP ++ L+ +R++ KA + Q +D L
Sbjct: 622 AAQKLGLKPDEFIKTPTGDEFVKASVRKGLLPQILENLLSARKRAKAELAQ---ETDPLR 678
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 679 RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVETKYTLE 738
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYML 830
+ N +V+YGDTDS+M V+ +G + + + + + L+ + VY L
Sbjct: 739 NGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSSHFPSPIRLEFEKVYFPYL 798
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S S+ +M C KG++ VRRD L + + +IL
Sbjct: 799 LISKKRYAGLLFSSRSDAHDRMDC----KGLEAVRRDNCPLVANLVTSSLRRIL------ 848
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D H K + +DL + ++ L ITK+LT+A +Y ++A HV++A R+
Sbjct: 849 ---VDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQA--HVELAERM 903
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRA 979
+ GD + Y+I AA ++
Sbjct: 904 RKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKS 935
>gi|147918852|ref|YP_687422.1| DNA-directed DNA polymerase B [Methanocella arvoryzae MRE50]
gi|110622818|emb|CAJ38096.1| DNA-directed DNA polymerase B [Methanocella arvoryzae MRE50]
Length = 798
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 211/414 (50%), Gaps = 42/414 (10%)
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM 670
E GE + + Y+GG V EP KG + K + +DF+++YPSI+ YNI T+
Sbjct: 391 EHGELIPSRAGEVETYAGGFVFEPVKGLH-KNVAALDFSAMYPSIMIAYNISPDTVCEAG 449
Query: 671 LQD-SDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQK 729
QD S+ Y + Q + G + +K LV R +K + Q + S+ D+RQK
Sbjct: 450 DQDCSEPAPEVGYRFKKQPE-GFFTTILKNLVTHRSTLKKRLAQLDRKSNEYRMLDLRQK 508
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLM 789
++K+ N+ YG G+ ++++ + A +A GR + + + +V+YGDTDSL
Sbjct: 509 SIKILTNAFYGYTGWAQAKWYRRECAEATSAWGRYFIKKANDIAIEMGLQVLYGDTDSLF 568
Query: 790 ISCNVND--YDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLS 846
+ N D V + ++K+E L++DID VY+ + + KK+YA L+
Sbjct: 569 VEMEDNKRLMDVVRQYIQRVKAEL-----PLDMDIDNVYRIIFFTESKKRYAGLT----D 619
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
G+++ ++G++V R DW ++A E VI IL+E+ + D + + + ++K+
Sbjct: 620 RGEIV----VRGLEVRRGDWCEIAKELQSEVIRIILEEE-----NPDKAAKFVKDTVQKV 670
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYII 966
++ G VPL L I K LTK+ Y +A HV+ A R + + G+ ISY+I
Sbjct: 671 KS----GKVPLDALVIHKTLTKSVTRYESAQA--HVKAAERAMERDMAA-EIGNKISYVI 723
Query: 967 CEDGTSEAATQRAYNIEELK--NNSKL-------KIDVNYYLSQQIHPVVTRLL 1011
+ GT + RAY ++ +SKL +ID +YY+ +Q+ P R+L
Sbjct: 724 VK-GTG-TLSDRAYPVDMFHKFKDSKLYAKDKTYEIDADYYVDKQLIPTALRIL 775
>gi|50293371|ref|XP_449097.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528410|emb|CAG62067.1| unnamed protein product [Candida glabrata]
Length = 1096
Score = 149 bits (377), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 203/423 (47%), Gaps = 66/423 (15%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + ++ +D I
Sbjct: 586 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVDRLNLKKEEDYII 645
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 646 TPNGDYFVTTKKRRGILPIILDELISARKRAKKDLRDETDPFKRDVL---NGRQLALKIS 702
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VT+ GR +++ TK VE + VIYGDT
Sbjct: 703 ANSVYGFTGATVGKLPCLAISSSVTSFGRVMIMETKKAVEEKYSIKNGAKHDAVVIYGDT 762
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D ++G + + +KL+K + L+ + Y LL+ KK+YA L
Sbjct: 763 DSVMVKFGTTDLKEAMELGAEAAAFVSKLFKHPINLEFEKAYFPYLLINKKRYAGLY--- 819
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ------SYTDYSLDDRLQN 898
+N + KG+ VRRD L S V+ +IL ++ + ++DD LQN
Sbjct: 820 WTNPDKYDKLDQKGLASVRRDSCSLVSIIMNKVLKKILIDRDVDSALGFVKATIDDILQN 879
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
R D+ + TL AP YT+ + PH +A R+ +
Sbjct: 880 --------RVDISKLIISKTL---------AP-NYTNPQ--PHAVLAERMKKRDGSGPNI 919
Query: 959 GDTISYIICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPVVTRLLEP 1013
GD + Y+I G + YN E L++N ++ID YYL+ Q+ + ++ P
Sbjct: 920 GDRVDYVITGGG------DKLYNRAEDPLYVLEHN--IQIDSRYYLTNQLQNPIISIVAP 971
Query: 1014 IEG 1016
I G
Sbjct: 972 IIG 974
>gi|429216955|ref|YP_007174945.1| DNA polymerase pol2 [Caldisphaera lagunensis DSM 15908]
gi|429133484|gb|AFZ70496.1| DNA polymerase pol2 [Caldisphaera lagunensis DSM 15908]
Length = 799
Score = 149 bits (376), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 197/397 (49%), Gaps = 44/397 (11%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R Y G +VL+P+ G ++ +L DF S+YPSI+ +YNI P +L+D + +
Sbjct: 414 RNIETYIGAVVLKPEPGIHENVAVL-DFASMYPSIMVKYNIG----PDTLLKDGENCKIR 468
Query: 681 EYLPE--HQV---DTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
PE H+ + +++ ++ R + K MK S + RQKA+K+ A
Sbjct: 469 NRAPEVNHEFCFDRPAFMKMVLERFLKWRSETKKAMKLYKEGSPEYNLLNERQKAIKVLA 528
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVN 795
N+ YG LG+ +R++ + A +TA GR+++ NT + +++ +V YGDTDS+ + N
Sbjct: 529 NASYGYLGWGAARWYCRDCAEAITAWGRDLISNTINFAKSIGLKVYYGDTDSVFVD---N 585
Query: 796 DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQ 854
D D + K+ N I +E + ++ +D VYK + + KK+YA L L NGK+
Sbjct: 586 DEDKINKLINWITNEL-----EFDIKVDKVYKRIFFTEAKKRYAGL----LDNGKI---- 632
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
+I G + VR DWS LA E + IL D + I E++K I L G
Sbjct: 633 DIVGFEAVRGDWSDLAKEVQSNIAELIL--------KTGDPKKAI-EYIKSIIESLKKGE 683
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
+PL L I K LTK EY PH A +L K+ G + ++I + S +
Sbjct: 684 IPLDKLIIWKTLTKEINEY--EAETPHAYAA-KLMEKMGYKITPGSKVGFVIIKGPGSIS 740
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
R Y + +K + ID NYY+ +QI P R+L
Sbjct: 741 KKARPYFM--IKESD---IDTNYYIDKQIIPSALRIL 772
>gi|15922397|ref|NP_378066.1| DNA polymerase II [Sulfolobus tokodaii str. 7]
gi|342306638|dbj|BAK54727.1| DNA polymerase [Sulfolobus tokodaii str. 7]
Length = 781
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 227/454 (50%), Gaps = 56/454 (12%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I +T + G L + M R E+LL+ ++ + ++P+K+
Sbjct: 361 IELTRISGLPLDQLSMASVGHRVEWLLMREAYKYNELIPNKE------------------ 402
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R+ +Y GGLV+ P G ++ + ++DF+S+YPSI+ +YNI T+ ++ I+
Sbjct: 403 EREYESYEGGLVISPLPGIHED-VYVLDFSSMYPSIMIKYNIGPDTLVKGECENCWISPA 461
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMY 739
+ G+ + ++KL++ R++VK LM++ D + D RQ+ALK+ AN+ Y
Sbjct: 462 GHKFRKDP--PGLYKNVLEKLIQERKEVKKLMEKTMDEYDKRVL-DARQRALKVMANAFY 518
Query: 740 GCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDYDS 799
G +G+ +R++++ A VTA GR+I+ + + + + VIYGDTDS+ + D +S
Sbjct: 519 GYMGWLGARWYSKEGAEAVTAWGRQIISESAKIAKEKGFTVIYGDTDSIFVKGG-GDINS 577
Query: 800 VFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICSQEIKG 858
+ +I S+ LE+ ID +YK + + KK+YA L+ +GK+ +I G
Sbjct: 578 LI---TEISSKFG-----LEIKIDKIYKRVFFTENKKRYAGLT----EDGKI----DIVG 621
Query: 859 VDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLT 918
+ VR DW LA + VI IL ++++ +++K + DL +
Sbjct: 622 FEAVRGDWCDLAKQVQTNVIELILKS---------GKVEDAIKYVKTVIFDLRRYNFRIE 672
Query: 919 LLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQR 978
L I K + K +EY D A PHV VA + + +G I Y+I + +
Sbjct: 673 DLIIWKTIDKNLDEY-DVTA-PHV-VAAKKAAKAGYLVSKGVKIGYVIVKGSGKISDKAE 729
Query: 979 AYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
Y + + KN KIDV YY+ +QI PV R+LE
Sbjct: 730 PYFLIKEKN----KIDVEYYIDKQIIPVAMRILE 759
>gi|389860533|ref|YP_006362772.1| DNA polymerase family B [Thermogladius cellulolyticus 1633]
gi|388525436|gb|AFK50634.1| DNA polymerase family B [Thermogladius cellulolyticus 1633]
Length = 800
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 202/412 (49%), Gaps = 43/412 (10%)
Query: 608 EGEETGEANKGKGRKKA-AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI 666
E + GE + K+A Y G +VL+P +G +D +L DF+S+YP+++ +YN+ TI
Sbjct: 394 EAMKAGELIPNREEKEAEPYKGAVVLQPVRGIHDNVAVL-DFSSMYPNLMIKYNVGPDTI 452
Query: 667 PVRMLQDSDITTLCEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
+ D+ T PE + G + KL+E R+ +++ MK+ +
Sbjct: 453 --ERAGECDVGT-HNIAPEVGHCFRREPPGFFKDVLTKLLELRKSIRSEMKKYKPDTVEY 509
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVI 781
D RQ+A+K+ AN+ YG +G+ +R++ + A VTA GR + N E L +VI
Sbjct: 510 RILDERQRAIKILANATYGYMGWVGARWYCRECAEAVTAWGRATITNVIKYAEGLGLKVI 569
Query: 782 YGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAAL 840
YGDTDS+ + + D + K ++ E LE+ ID +Y + + KK+YA L
Sbjct: 570 YGDTDSIFVKYDKEKVDKLIK---YVEEELG-----LEIKIDKLYTRVFFTEAKKRYAGL 621
Query: 841 SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
L +G++ +I G + VR DW+++A E + + +L D L
Sbjct: 622 ----LEDGRV----DIVGFEAVRGDWAEIAKEVQEEITEILLK---------DGDLNKAI 664
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD 960
E+++ + + + +G VP+ L I K LTK PEEY+ PHV A +L ++ D
Sbjct: 665 EYVRSVVSQVKSGSVPVEKLVIWKTLTKRPEEYS--AEAPHVSAARKLMKRGV-RVDIND 721
Query: 961 TISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
I Y++ + + RA +K+ +D YY+ QI P R+LE
Sbjct: 722 KIGYVVVKGAGK--ISDRAEPYIFVKDPK--SVDDAYYVDHQIIPAAMRILE 769
>gi|320101467|ref|YP_004177059.1| replicative DNA polymerase I [Desulfurococcus mucosus DSM 2162]
gi|319753819|gb|ADV65577.1| replicative DNA polymerase I [Desulfurococcus mucosus DSM 2162]
Length = 799
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 224/471 (47%), Gaps = 72/471 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
+++ N+ G L + R E+ L+ + ++P++ +KE E
Sbjct: 365 MQLANITGLPLDQVGAASVGHRLEWFLMKEATRRGELIPNRV----EKEAE--------- 411
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
Y G +VL+P G ++ I ++DF S+YP+I+ +YNI TI L+ + ++
Sbjct: 412 -----PYKGAVVLQPLPGIHEN-IAVLDFTSMYPNIMIKYNIGPDTI----LRGGECSS- 460
Query: 680 CEYLPEHQVDT-----------GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQ 728
EH V G ++ L+ RRQ++A MK+ + S D RQ
Sbjct: 461 ----EEHNVAPEVGHCFLREPQGFFKGVLQALLALRRQLRAEMKKHPVDSPEYRLLDERQ 516
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSL 788
+A+K+ AN+ YG +G+ +R++ + A VTA GR + +++ +VIYGDTDSL
Sbjct: 517 RAVKILANAAYGYMGWVGARWYCRECAEAVTAWGRRTISTVIEHAKSMGLKVIYGDTDSL 576
Query: 789 MISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSN 847
+ N + V ++ + ++ E E+ +D VY+ + + KK+YA L L +
Sbjct: 577 FVE---NIPEKVKELADFVEKEMG-----FEIKVDKVYRRVFFTEAKKRYAGL----LED 624
Query: 848 GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIR 907
G++ +I G + VR DW+++A E + V +L E++ ++ ++++ I
Sbjct: 625 GRV----DIVGFEAVRGDWAEIAKEVQEKVTEILLSEKN---------IEKAIDYVRSIV 671
Query: 908 TDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIIC 967
++L+ G +PL L I K LTK +EY PHV A +L ++ GD + YI+
Sbjct: 672 SELNQGRIPLEKLVIWKTLTKQVDEYEAEA--PHVNAAKKLRRMGI-MVEVGDKVGYIVV 728
Query: 968 EDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
+ + Y + +L +D +YY+ QI P R+L TD
Sbjct: 729 KGPGKISERAEPYM---FVKDPRL-VDASYYIDHQIIPAALRILGYFGVTD 775
>gi|156844887|ref|XP_001645504.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156116168|gb|EDO17646.1| hypothetical protein Kpol_1004p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 1096
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 209/401 (52%), Gaps = 46/401 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT+ + + +D D I
Sbjct: 586 YEGATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNLCYTTLCNKETVQRLNLKKDEDYII 645
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y ++ GILP +++L+++R++ K +K ++L + RQ ALK++
Sbjct: 646 TPNGDYFVSTKLRHGILPIILRELIDARKRAKKDLKNETDPFKKNVL---NGRQLALKIS 702
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR++++ TK+ VE + V+YGDT
Sbjct: 703 ANSVYGFTGATVGKLPCLAISSSVTAFGRDMIMTTKNAVEEKYRISNGYKHDAVVVYGDT 762
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ +D ++G + + + L+K + L+ + Y LL+ KK+YA L ++
Sbjct: 763 DSVMVKFGTSDLKESMELGTEAAAFVSGLFKDPINLEFEKAYFPYLLINKKRYAGLYWTR 822
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+ + KG+ VRRD L S V+ +IL +D + N ++K
Sbjct: 823 TEKYDKL---DQKGLASVRRDSCPLVSIVMNKVLKKIL---------IDRDVDNALAYVK 870
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
+I +L + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 871 QIIDNLLHNKVDISQLIISKTL--AP-NYTNPQ--PHAILAERIRKREGSGPNTGDRVDY 925
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIH 1004
+I G ++ RA + + L++N L++D YYL+ Q+
Sbjct: 926 VIM--GGNDKLYNRAEDPLYVLEHN--LQLDSKYYLTNQLQ 962
>gi|340502511|gb|EGR29193.1| hypothetical protein IMG5_161090 [Ichthyophthirius multifiliis]
Length = 1092
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 219/442 (49%), Gaps = 64/442 (14%)
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML-- 671
E +KG+G K + G VLEPK+GFY K I +DF SLYPSI+ +N+C++T+ R +
Sbjct: 543 ERSKGQGDK---FEGAFVLEPKRGFYSKPIATLDFASLYPSIMMAHNLCYSTLITRDITL 599
Query: 672 ----QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYD 725
D T +Y + + GILP +K+L+ +R++ K + Q L +L D
Sbjct: 600 KMNKDDYTATPNGDYFVKPHIRKGILPEILKELLNARKKAKNDLTQETDPLKKAVL---D 656
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV-----ENLNYE- 779
RQ ALK++ANS+YG G + +++ VT+ GR ++ T+ V + YE
Sbjct: 657 GRQLALKISANSVYGFTGAQLGQLPCLQISSSVTSFGRNMIEGTRDFVLEHFSKKNGYEY 716
Query: 780 ---VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNK--LYKQLELDIDGVYKYMLLLKK 834
VIYGDTDS+M+ V +G + S K ++L+ + VY LL+ K
Sbjct: 717 DSDVIYGDTDSVMVQFGVPTIQEAMNLGKEAASLITKKLFINPIKLEFEKVYCPYLLINK 776
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L +K I + KG++ VRRD Q+ + + +L E + ++
Sbjct: 777 KRYAGLYFTKPDKYDKI---DTKGMENVRRDNCQMIRDIMNNCLKYVLVEFN------NN 827
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPE----------------EYTDRKA 938
++ E++K + +DL + ++ L ITK LTK + +Y ++A
Sbjct: 828 GVEKAIEYIKGMVSDLYQNKIDISKLVITKSLTKKAQEGDDEDDENEKKTNKDQYKSKQA 887
Query: 939 LPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKN-----NSKLK 992
HV++A ++ ++ GD I ++I A ++ A N E++++ N +
Sbjct: 888 --HVELAKKMALRDAGSAPSIGDRIPFVII------AGSKNAKNYEKVEDPIYVVNHDIP 939
Query: 993 IDVNYYLSQQIHPVVTRLLEPI 1014
+D +YY+ +QI + R+ E I
Sbjct: 940 LDYDYYIEKQIKKPLIRIFEHI 961
>gi|2581888|gb|AAC47771.1| DNA polymerase alpha [Endotrypanum monterogeii]
Length = 313
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 117/194 (60%), Gaps = 24/194 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKKEGEETGEANKG 618
R+T + GN+ SRTL GGRSER E+LLLH FH+ ++ PD+ Q K + G + +
Sbjct: 127 RLTTIAGNLWSRTLFGGRSERIEYLLLHTFHDLKFITPDRYVQDFKRSRGGGGDDDDGEE 186
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
G++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ D +
Sbjct: 187 DGKRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTV------DRKDQS 240
Query: 679 LCEYLPEHQVDTG---------------ILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+ E P + +LP IK LV+SRR+VK LMK + L +
Sbjct: 241 VIEVPPPENLICASCAGAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDPNSLAL- 299
Query: 724 YDIRQKALKLTANS 737
+IRQKALKLTANS
Sbjct: 300 LEIRQKALKLTANS 313
>gi|2581892|gb|AAC47773.1| DNA polymerase alpha [Leishmania herreri]
Length = 313
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 117/194 (60%), Gaps = 24/194 (12%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDK--QYGKNKKEGEETGEANKG 618
R+T + GN+ SRTL GGRSER E+LLLH FH+ ++ PD+ Q K + G + +
Sbjct: 127 RLTTIAGNLWSRTLFGGRSERIEYLLLHTFHDLKFITPDRYVQDFKRSRGGGGDEDDGEE 186
Query: 619 KGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT 678
G++KA Y GG+VL+PK G Y +I+L+DFNSLYPS+IQE+NICFTT+ D +
Sbjct: 187 DGKRKAKYQGGMVLDPKCGLYSDYILLLDFNSLYPSLIQEFNICFTTV------DRKDQS 240
Query: 679 LCEYLPEHQVDTG---------------ILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ 723
+ E P + +LP IK LV+SRR+VK LMK + L +
Sbjct: 241 VIEVPPPENLICASCAGAGLSAPCLHKCVLPKVIKSLVDSRREVKRLMKTEKDPNSLAL- 299
Query: 724 YDIRQKALKLTANS 737
+IRQKALKLTANS
Sbjct: 300 LEIRQKALKLTANS 313
>gi|259090299|pdb|3IAY|A Chain A, Ternary Complex Of Dna Polymerase Delta
Length = 919
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 207/413 (50%), Gaps = 46/413 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + +++ +D I
Sbjct: 521 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKATVERLNLKIDEDYVI 580
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 581 TPNGDYFVTTKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 637
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 638 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKTAVQEKYCIKNGYKHDAVVVYGDT 697
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 698 DSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 754
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 755 WTNPDKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVRETIN 809
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 810 ----DILHNRVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 860
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G
Sbjct: 861 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIG 909
>gi|254577417|ref|XP_002494695.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
gi|238937584|emb|CAR25762.1| ZYRO0A07524p [Zygosaccharomyces rouxii]
Length = 1090
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 217/435 (49%), Gaps = 57/435 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP---------VRMLQDSDI 676
Y G V+EP +G+YD I +DF+SLYPSI+ +N+C+TT+ +++ +D +
Sbjct: 580 YEGATVIEPIRGYYDIPIATLDFSSLYPSIMMAHNLCYTTLTSKSTVEKFNMKLDEDYIM 639
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y +V GILP+ +++L+ +R++ K +K D+L + RQ ALK++
Sbjct: 640 TPNGDYFVTSKVRRGILPTILEELIGARKRAKKDLKNETEPFRKDVL---NGRQLALKVS 696
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VT+ GR +++ TK VE + V+YGDT
Sbjct: 697 ANSVYGFTGATVGKLPCLAISSSVTSFGRNMIMLTKQAVEEKYSIKNGFKHDSLVVYGDT 756
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D K+G + + + L+K + L+ + Y LL+ KK+YA L +
Sbjct: 757 DSVMVKFGTTDLKEAMKLGAEAAAYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLFWTN 816
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
I + KG+ VRRD L S V+ +IL E++ ++ +K
Sbjct: 817 PDKYDKI---DQKGLASVRRDSCPLVSIVMNKVLKKILIERN---------VEGALGFVK 864
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
+I D+ + ++ L I+K L AP YT+ + PH + R+ + GD + Y
Sbjct: 865 EIIDDILHNKADISKLIISKTL--AP-NYTNPQ--PHAVLTERMKKRDGVGPNVGDRVDY 919
Query: 965 IICEDGTSEAATQRAYNIEE-----LKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG--- 1016
++ A + YN E L++N ++ID YYL+ Q+ + ++ PI G
Sbjct: 920 VVI------AGNDKLYNRAEDPLYVLEHN--MQIDSRYYLTNQLQNPIISIVAPILGEKQ 971
Query: 1017 TDAVRIAECLGLDTS 1031
+A+ + + + ++T
Sbjct: 972 ANAMFVVKSIKINTG 986
>gi|11498108|ref|NP_069333.1| DNA polymerase B1 [Archaeoglobus fulgidus DSM 4304]
gi|3122019|sp|O29753.1|DPOL_ARCFU RecName: Full=DNA polymerase
gi|2650130|gb|AAB90741.1| DNA polymerase B1 (polB) [Archaeoglobus fulgidus DSM 4304]
Length = 781
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 205/430 (47%), Gaps = 54/430 (12%)
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIP 667
E ++ GE +Y G VLEP++G ++ + +DF S+YPSI+ +NI T
Sbjct: 373 EAKKIGEIAPNPPEHAESYEGAFVLEPERGLHEN-VACLDFASMYPSIMIAFNISPDTYG 431
Query: 668 VRMLQDSDITTLCEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
R C PE + G ++ L+E RR++K +K + S
Sbjct: 432 CR--------DDCYEAPEVGHKFRKSPDGFFKRILRMLIEKRRELKVELKNLSPESSEYK 483
Query: 723 QYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIY 782
DI+Q+ LK+ NS YG +G+ +R++ P A TA GR + + + E++ ++V+Y
Sbjct: 484 LLDIKQQTLKVLTNSFYGYMGWNLARWYCHPCAEATTAWGRHFIRTSAKIAESMGFKVLY 543
Query: 783 GDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSI 842
GDTDS+ ++ + V ++ +++ E +++++D Y + ++KK+YA L+
Sbjct: 544 GDTDSIFVTKAGMTKEDVDRLIDKLHEEL-----PIQIEVDEYYSAIFFVEKKRYAGLT- 597
Query: 843 SKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEH 902
+G+++ +KG++V R DW +LA + + VI IL E++ +
Sbjct: 598 ---EDGRLV----VKGLEVRRGDWCELAKKVQREVIEVILKEKN---------PEKALSL 641
Query: 903 MKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTI 962
+K + + G V L + I K LTK P +Y +A HV+ AL+ I
Sbjct: 642 VKDVILRIKEGKVSLEEVVIYKGLTKKPSKYESMQA--HVKAALKAREMGI-IYPVSSKI 698
Query: 963 SYIICEDGTSEAATQRAYNIE----------ELKNNSKL---KIDVNYYLSQQIHPVVTR 1009
Y+I + S RAY I+ +K S + K+D +YY+ QI P V R
Sbjct: 699 GYVIVK--GSGNIGDRAYPIDLIEDFDGENLRIKTKSGIEIKKLDKDYYIDNQIIPSVLR 756
Query: 1010 LLEPIEGTDA 1019
+LE T+A
Sbjct: 757 ILERFGYTEA 766
>gi|327507712|sp|P0CL76.1|DPOL_PYRAY RecName: Full=DNA polymerase 1; AltName: Full=Pab polymerase
gi|1495770|emb|CAA90887.1| DNA-dependent DNA polymerase; endonuclease [Pyrococcus sp.]
Length = 771
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 204/397 (51%), Gaps = 45/397 (11%)
Query: 625 AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TL 679
+Y GG V EP+KG ++ I+ +DF SLYPSII +N+ T+ ++ D+
Sbjct: 384 SYEGGYVKEPEKGLWEG-IVSLDFRSLYPSIIITHNVSPDTLNRENCKEYDVAPQVGHRF 442
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLTANS 737
C+ P G +PS + L+E R+++K MK+ + LL D RQ+A+K+ ANS
Sbjct: 443 CKDFP------GFIPSLLGNLLEERQKIKKRMKESKDPVEKKLL---DYRQRAIKILANS 493
Query: 738 MYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNVNDY 797
YG G+ +R++ + A VTA GR+ + + +E+ ++V+Y DTD L +
Sbjct: 494 YYGYYGYAKARWYCKECAESVTAWGRQYIDLVRRELESSGFKVLYIDTDGLYATIPGAKP 553
Query: 798 DSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEI 856
+ + + + N KL LEL+ +G Y + KKKYA + GK++
Sbjct: 554 NEIKEKALKFVEYINSKLPGLLELEYEGFYARGFFVTKKKYALID----EEGKIVT---- 605
Query: 857 KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVP 916
+G+++VRRDWS++A E V+ IL ++D+ ++ + E +K L +P
Sbjct: 606 RGLEIVRRDWSEIAKETQAKVLEAILKHG-----NVDEAVKIVKEVTEK----LSKYEIP 656
Query: 917 LTLLEITKQLTKAPEEYTDRKAL-PHVQVALRLNNTNSKKLKQGDTISYIICE-DGTSEA 974
L I +Q+T+ EY KA+ PHV VA RL K+K G I YI+ DG
Sbjct: 657 PEKLVIYEQITRPLSEY---KAIGPHVAVAKRL-AAKGVKVKPGMVIGYIVLRGDG---P 709
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
++RA IEE + K K D YY+ Q+ P V R+L
Sbjct: 710 ISKRAIAIEEF-DPKKHKYDAEYYIENQVLPAVERIL 745
>gi|300681495|emb|CBH32591.1| unnamed protein product [Triticum aestivum]
Length = 1016
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 109/176 (61%), Gaps = 32/176 (18%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK------------E 608
++TN+ GN+ +TL G R++R E+LLLH+FH K +++PDK +NK+ E
Sbjct: 848 QLTNISGNLWGKTLQGARAQRVEYLLLHSFHAKKFIIPDKFAARNKELNSAKRKLNADTE 907
Query: 609 G-------------EETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSI 655
G +E ++GK RK +Y+GGLVLEPKKG YDK+I+L+DFNSLYPSI
Sbjct: 908 GGNAADGAADPSIDDEVHNGDQGKARKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSI 967
Query: 656 IQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALM 711
IQE+NICFTT V D ++ LP + TG+LP ++ LVE RR VK+ +
Sbjct: 968 IQEFNICFTT--VERSSDGNLPN----LPNSKA-TGVLPELLQSLVERRRMVKSWL 1016
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 29/205 (14%)
Query: 384 MFFLDAFEDIYK-QPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLP---------- 432
+ LDA+E+ + GTVYLFGKV + + SCCV+V+N+ R IY +P
Sbjct: 386 FYVLDAYEEPFGINSGTVYLFGKVVIGKR--FHSCCVVVKNMQRCIYAIPSSSVFPRDTI 443
Query: 433 -RSEHLKTKEPVSIAQVYSEFDQIATQYKI-----------LDFKSRKIEKKYAFNLPGV 480
R E T S + + ++++ KI +F +++ YAF V
Sbjct: 444 SRIEKNSTSSDAS-PSLRATLHELSSGLKIEVAEKLSDLNVSNFVMTPVKRNYAFERTDV 502
Query: 481 PDLSEY-LEVRYSAKCPALPSDLSGDTFSHVFGTKSSFLENLLLERKIKGPSWLEFPEAE 539
P +Y L++ Y K PA+P+DL G+ F + GT +S LE L++RKIKGPSWL +
Sbjct: 503 PIGEQYVLKINYPYKDPAVPADLRGEHFHALLGTNNSALELFLIKRKIKGPSWLSISKFV 562
Query: 540 KFPS--RISWCKYEVQCNQMEKIRI 562
PS R+SWCK+EV + + I +
Sbjct: 563 ACPSTQRVSWCKFEVTVDSPKDISV 587
>gi|169806198|ref|XP_001827844.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi H348]
gi|161779292|gb|EDQ31315.1| DNA polymerase delta catalytic subunit [Enterocytozoon bieneusi H348]
Length = 968
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 206/409 (50%), Gaps = 43/409 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRMLQDSDI--TTL 679
Y G V+ P KGFY I ++DF SLYPSII N+C+TT+ ++ DI T
Sbjct: 461 YDGAFVINPLKGFYKDPIAVLDFCSLYPSIIISNNLCYTTLLNDKMAARFKELDIIKTPT 520
Query: 680 CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQKALKLTAN 736
+ + G+LP ++KL+ +R+ K L+K+ P L L D RQ ALKL AN
Sbjct: 521 GDCFVSSHIKKGLLPIILEKLLSNRKLTKKLLKETEDPELQKIL----DGRQLALKLCAN 576
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDTDS 787
S+YG G + ++ TA GR+++ TK+L+E+ + VIYGDTDS
Sbjct: 577 SIYGFTGAQVGQLPCISISQSTTAFGRDMISKTKNLIESKYSKASGFTHDVIVIYGDTDS 636
Query: 788 LMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
+M++ + + VFK+ +I ++ K + L+ + VY LL+ KK+YA L +
Sbjct: 637 VMLNFQEPNIELVFKLAKEIAEVITAIFIKPVALEFEKVYCPYLLMNKKRYAGLLFTNPY 696
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
I + KG++ VRRD +L K +I L++ Y + +Q + +K
Sbjct: 697 KSDKI---DTKGIETVRRDNCELV----KIIIDNCLNKILY-----EKDIQGAIDLIKMK 744
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY-I 965
+L N + ++ L I+K TK+ Y + A H ++ +L +++ GD I Y I
Sbjct: 745 IDELYNDKIDISQLVISKAYTKS--NYNVKSA--HTELVNKLRE-RGVEIRIGDRIPYVI 799
Query: 966 ICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
IC D ++ + I L+NN + ID+ YY+ Q+ + RL EPI
Sbjct: 800 ICGDKKTQIYNRSEDPIYVLENN--IPIDIEYYIEHQLSNPIKRLFEPI 846
>gi|384483568|gb|EIE75748.1| hypothetical protein RO3G_00452 [Rhizopus delemar RA 99-880]
Length = 233
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 120/180 (66%), Gaps = 5/180 (2%)
Query: 561 RITNVCGNVLSRTLMGG-RSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
++T + GN+ S ++ GG R++RN++LLLHAF++ ++ PDK+ + + + T E
Sbjct: 55 QLTKLAGNLWSTSINGGARTDRNDYLLLHAFYKNQFICPDKRDRRVNSKQDSTEE--DII 112
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRML--QDSDIT 677
+ ++++SGGLVLEPK G Y K+++L+DFNSLYPSIIQEYN+C TT+ ++ + ++ +
Sbjct: 113 KQNESSFSGGLVLEPKPGLYKKYVLLLDFNSLYPSIIQEYNVCHTTMNLQKIGANETSMD 172
Query: 678 TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANS 737
+ + + GILP ++K V+ R+QVK MK P +S QYDI QKALK TAN+
Sbjct: 173 MIAQEMLSESQRIGILPKLVRKFVQRRQQVKKAMKDPTISDSQRNQYDIEQKALKGTANN 232
>gi|367016721|ref|XP_003682859.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
gi|359750522|emb|CCE93648.1| hypothetical protein TDEL_0G02810 [Torulaspora delbrueckii]
Length = 1094
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 216/437 (49%), Gaps = 61/437 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------PVRMLQDSD--I 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT+ +++ Q+ D I
Sbjct: 584 YEGATVIEPIRGYYDIPIATLDFNSLYPSIMMAHNLCYTTLCNKATVDRMKLKQEEDYII 643
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y ++ GILP + +L+ +R++ K +K D+L + RQ ALK++
Sbjct: 644 TPNGDYFVTSKLRRGILPIILDELISARKRAKKDLKNEKDPFKRDVL---NGRQLALKIS 700
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VT+ GRE+++ TK VE + V+YGDT
Sbjct: 701 ANSVYGFTGATVGKLPCLAISSSVTSFGREMIMLTKKSVEEKYCVKNGFKHDAVVVYGDT 760
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ ND +G + + + L+K + L+ + Y LL+ KK+YA L +
Sbjct: 761 DSVMVKFGTNDLKEAMDLGAEAAAYVSTLFKHPINLEFEKAYFPFLLINKKRYAGLFWTS 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ------SYTDYSLDDRLQN 898
+ + KG+ VRRD L S V+ +IL ++ ++ ++DD L N
Sbjct: 821 PEKYDKL---DQKGLASVRRDSCPLVSIVMNKVLKRILIQRDVDGALAFVKKTIDDILHN 877
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
R D+ + TL AP YT+ + PH + R+ +
Sbjct: 878 --------RADISKLIISKTL---------AP-NYTNPQ--PHAVLTERMKKRDGVGPNV 917
Query: 959 GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG- 1016
GD + Y+I G ++ RA + + L++N ++ID YYL+ Q+ + ++ PI G
Sbjct: 918 GDRVDYVIM--GGNDKLYNRAEDPLYVLEHN--IQIDSRYYLTNQLQNPLISIIAPIIGE 973
Query: 1017 --TDAVRIAECLGLDTS 1031
+A+ + + + ++T
Sbjct: 974 KQANAMFVVKSIKINTG 990
>gi|300122468|emb|CBK23038.2| unnamed protein product [Blastocystis hominis]
Length = 850
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 235/488 (48%), Gaps = 67/488 (13%)
Query: 549 KYEVQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKS----YVLPDKQYGK 604
K V NQ+E R+T V N+L S + +L H KS Y++P
Sbjct: 277 KLNVIINQVEMARVTGVPINML-------LSRGQQIKVLSMIHRKSLQLGYIIP------ 323
Query: 605 NKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFT 664
+ + Y G V+EPKKG+Y++ I +DF SLYPSI+ +NIC++
Sbjct: 324 -----------TLDRSNQSEKYEGATVIEPKKGYYEEPIATLDFASLYPSIMIAHNICYS 372
Query: 665 T-IPVRMLQDSDIT----TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSD 719
T IP M D T +L + + + G+LP +++L+ +R+ K M +
Sbjct: 373 TLIPDSMEIDESRVERSPTGNRFLKKSERE-GVLPIILRELLAARKVAKKDMAKETDPLK 431
Query: 720 LLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREIL-LNTKSLVENL-- 776
+Q + RQ ALK++ANS+YG G + ++ VT+ GR ++ + + ++E
Sbjct: 432 KAVQ-NGRQLALKVSANSVYGFTGATVGQLPCLAISRTVTSYGRAMIEMTQRKVMERYCI 490
Query: 777 --NYE----VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYM 829
YE ++YGDTDS+M+ V + K+G + + + + L+ + VY
Sbjct: 491 KNGYEHDAMIVYGDTDSVMVKFGVKTVEEAMKLGKEAAEYVSGFFPDPVRLEFEKVYFPY 550
Query: 830 LLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
LL+ KK+YA L +K + + KG++ VRRD +L +IL +
Sbjct: 551 LLMNKKRYAGLFWTKPEKWDKL---DAKGIETVRRDNCRLV---------RILVDTCLKK 598
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEE----YTDRKALPHVQVA 945
+D ++ E++K + L + ++LL ITK L K ++ Y + A HV++A
Sbjct: 599 LLIDRSPEDAVEYVKSTLSALLQNQIDISLLVITKALGKKADDDGKGYKAKAA--HVELA 656
Query: 946 LRLNNTNSKKL-KQGDTISYIICE-DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQI 1003
R+ + K GD ++Y+I E D ++A T+ I L+NN L+IDVN+YL Q+
Sbjct: 657 KRMAQRDPGSAPKVGDRVAYVIIEKDKGAKAYTKSEDPIYVLENN--LQIDVNWYLEHQL 714
Query: 1004 HPVVTRLL 1011
+ R+
Sbjct: 715 RGPIERIF 722
>gi|403353908|gb|EJY76499.1| DNA polymerase [Oxytricha trifallax]
Length = 1068
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 238/498 (47%), Gaps = 93/498 (18%)
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVR 669
E G +N+GK + G LV++P + F+ + I ++DF SLYPSI+ +NIC++T IP +
Sbjct: 519 ERGPSNEGK------FEGALVIDPNRDFFLEPIAILDFASLYPSIMLAHNICYSTLIPPK 572
Query: 670 MLQDSDI-----TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQY 724
++ + T ++ + +V GILP +++L+E+R++ K K+ LS + +
Sbjct: 573 AVKFYNPDHYLKTPTGDHFIKAEVKKGILPLILEELIEARKKAK---KEFALSDEKAV-L 628
Query: 725 DIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLV---------EN 775
D RQ A+K+ ANS+YG G + +++ VTA GRE++ +K+ V
Sbjct: 629 DGRQMAMKVAANSVYGFTGAQIGQLPCIAISSSVTAYGREMIEMSKNFVITRFNKQNGYK 688
Query: 776 LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKK 834
+ EVIYGDTDS+M+ V ++G + K + + ++L+ + VY LLL K
Sbjct: 689 YDSEVIYGDTDSVMVKFGVKSVAEAMELGQEAAEYVTKFFTEPIKLEFEKVYYPYLLLNK 748
Query: 835 KKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDD 894
K+YA L +K I + KG++ VRRD L + + ++ IL E+ ++ +LD
Sbjct: 749 KRYAGLLWTKPDKFDCI---DAKGIETVRRDSCGLVQDTVQNSLNMILIERD-SNKALD- 803
Query: 895 RLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEE---------------------- 932
+ K I +DL + L+LL I+K L K +
Sbjct: 804 -------YCKGIISDLLQNRIDLSLLVISKGLGKKSKSEIQDCISGPPTTIKEIKAQAKG 856
Query: 933 YTDRKALPHVQVALRLNNTNSKKL-KQGDTISYIICEDGTSEAATQRAYN-IEELKNNSK 990
YT ++A H ++A R+ ++ QGD ++Y++ + +++ + + L +N
Sbjct: 857 YTQKQA--HTELAERMRKRDAASAPNQGDRVAYVMVKKTADSKVHEKSEDPMFALTHN-- 912
Query: 991 LKIDVNYYLSQQIHPVVTRLLEPI---------------------------EGTDAVRIA 1023
+ ID YY Q+ + RL EPI G A+
Sbjct: 913 MPIDYQYYQDNQLKQPLLRLFEPIFPNAEDLLFKGEHTRNIYVPKLQPKTGLGKYAIVQK 972
Query: 1024 ECLGLDTSLYRSQIKESI 1041
+CLG T L + Q ++S+
Sbjct: 973 QCLGCKTILTKQQAEQSV 990
>gi|324120696|dbj|BAJ78739.1| DNA polymerase delta catalytic subunit [Epiophlebia superstes]
Length = 1007
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 224/488 (45%), Gaps = 71/488 (14%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL EK +V+P ++
Sbjct: 429 NYMEMARVTGV---PLSCLLTRGQQIKVVSQLLRKGKEKDFVIPTYSGAVQDEQ------ 479
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
+ G V+EP +G+Y I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 480 -----------FEGATVIEPLRGYYADPITTLDFSSLYPSIMMAHNLCYTT----LLQPG 524
Query: 675 DITTL------------CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
L + V G+LP ++ L+ +R++ K +K+ +D L
Sbjct: 525 TKEKLGLSTDQYAKTPSGNFFVRESVRKGLLPEILENLLSARKKAKNELKE---ETDPLR 581
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE------ 774
+ D RQ ALK++ANS+YG G + ++ VTA GR ++ TK VE
Sbjct: 582 RKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRAMIEQTKQEVEAKYCIS 641
Query: 775 ---NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYML 830
+ VIYGDTDS+M+ V + ++G + +K K ++L+ + VY L
Sbjct: 642 KGYTHDAIVIYGDTDSVMVKFGVKTLEEAMELGKEAAEYVSSKFVKPIKLEFEKVYFPYL 701
Query: 831 LLKKKKYAALSISKLSN-GKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTD 889
L+ KK+YA L ++ KM C KG++ VRRD L + + ++L
Sbjct: 702 LINKKRYAGLYFTRPDKYDKMDC----KGIETVRRDNCPLVANMMNTCLQKLL------- 750
Query: 890 YSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLN 949
+D + K++ DL + ++ L +TK+L K ++Y ++A HV++A ++
Sbjct: 751 --IDRDPDGAVAYAKQVIADLLCNRIDISQLVVTKELAK--QDYASKQA--HVELANKMR 804
Query: 950 NTNSKKL-KQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVT 1008
+ K GD + Y++ A +A + + NS + ID NYYL Q+ +
Sbjct: 805 KRDPGTAPKLGDRVPYVLTAAAKGTPAYMKAEDPIYVLENS-IPIDCNYYLENQLSKPLL 863
Query: 1009 RLLEPIEG 1016
R+ PI G
Sbjct: 864 RIFSPILG 871
>gi|66809121|ref|XP_638283.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum AX4]
gi|74853854|sp|Q54N97.1|DPOD1_DICDI RecName: Full=DNA polymerase delta catalytic subunit; AltName:
Full=DNA polymerase III
gi|60466714|gb|EAL64765.1| DNA polymerase delta catalytic subunit [Dictyostelium discoideum AX4]
Length = 1104
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 212/419 (50%), Gaps = 48/419 (11%)
Query: 618 GKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----PVRMLQD 673
GKG K + G +V+EP GFYD I +DF SLYPSI+ +N+C++T+ + L
Sbjct: 582 GKGEK---FQGAIVIEPTPGFYDTPIATLDFTSLYPSIMMAHNLCYSTLLSAEEAKKLPP 638
Query: 674 SDITT--LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQ 728
TT ++ + G+LP +++L+ +R++ K +K P + L D RQ
Sbjct: 639 EIYTTTPFGDHFIKSDTKKGLLPRILEELLSARKKAKDELKNEKDPFKRAVL----DGRQ 694
Query: 729 KALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NYE 779
ALK++ANS+YG G + ++ VT+ GRE+L TK +VE +
Sbjct: 695 LALKISANSVYGFTGARVGKLPCLEISRSVTSFGREMLDKTKKIVEERYTIANGYKHDAV 754
Query: 780 VIYGDTDSLMISCNVNDYDSVFKIG-NQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYA 838
+IYGDTDS+M+ V ++G + K + + LD + VY LL+ KKKYA
Sbjct: 755 IIYGDTDSVMVKFGVKTVAEAMEMGRDAAKFVTTTFIRPINLDFEKVYYPYLLMAKKKYA 814
Query: 839 ALSISKLS-NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
L +K + +M ++KG+++VRRD L ++ +IL E+ L+
Sbjct: 815 GLYWTKPDIHDRM----DVKGLEMVRRDTCLLVRNVVSTILKKILIEKD---------LK 861
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
+ E+ K + +DL + L++L ITK L+K +Y + + H ++A ++ +
Sbjct: 862 SAEEYTKSVISDLLQNRLDLSMLVITKALSKT--QYKGK--VIHNELARKMRARDPATAP 917
Query: 958 Q-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD + Y++ + ++A + + L++N + +D YYL +Q+ + R+ +PI
Sbjct: 918 NLGDRVPYVVIQGSKGAPIYEKAEDPLYALEHN--ILLDCQYYLDKQLKAPLIRIFKPI 974
>gi|268324246|emb|CBH37834.1| DNA polymerase [uncultured archaeon]
Length = 829
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 207/422 (49%), Gaps = 40/422 (9%)
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-I 666
E + GE KG + + GG VL P+KG ++ +I +DF+S+YP+I+ +NI T +
Sbjct: 410 EAFKRGELVPPKGGSEKTFEGGFVLPPEKGLHED-VIALDFSSMYPTIMISFNISPDTFV 468
Query: 667 PVRMLQDSDITTLCEY-LPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYD 725
+ D ++ E + G + L+ RR +KA MK + +SD D
Sbjct: 469 AATEVGDEEVYVAPEVGYAFRKAPDGFFKRIMSDLITRRRAIKADMKSYDKASDEYRLLD 528
Query: 726 IRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDT 785
I+Q+++K+ NS YG G+ ++F+ + A TA GR + + E ++VIYGDT
Sbjct: 529 IQQQSVKILTNSFYGYTGWSAAKFYKRECAEATTAWGRHFIKRAVKMAEESGFKVIYGDT 588
Query: 786 DSLMISCNV----NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLL-KKKKYAAL 840
DS+ + + + ++ + +I + K LEL + +K + KKK+YAAL
Sbjct: 589 DSIFVKFPLEVEGDRKKAILEKAEEISARITKEL-PLELALQDFFKTIFFTGKKKRYAAL 647
Query: 841 SISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIH 900
+ G+++ ++G++V R DW +LA E VI IL D +
Sbjct: 648 T----DTGEIV----VRGLEVRRGDWCELAKEVQTEVIELILR---------DKDPEKAM 690
Query: 901 EHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR-LNNTNSKKLKQG 959
++K + DL+ G +P+ L I K LT+ Y ++A HV A + L +++ + G
Sbjct: 691 AYVKSVIKDLERGNLPVHKLIIYKTLTRKISAYDTKQA--HVIAAEKALASSSHIAYEVG 748
Query: 960 DTISYIICEDGTSEAATQRAYNIEELKNNSK---------LKIDVNYYLSQQIHPVVTRL 1010
+ Y+I + + RA+ I+ ++ + + +ID++YYL Q+ PV R+
Sbjct: 749 SKVPYVILKGAGK--TSDRAFPIDIMERSERNEIYAEGRIYQIDISYYLLHQVIPVAHRV 806
Query: 1011 LE 1012
L+
Sbjct: 807 LQ 808
>gi|328770280|gb|EGF80322.1| hypothetical protein BATDEDRAFT_16581 [Batrachochytrium dendrobatidis
JAM81]
Length = 1125
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 222/477 (46%), Gaps = 90/477 (18%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITT---LCE- 681
Y G +V+EP KGFY I +DF SLYPSI+ +N+C++T + +SD+ L E
Sbjct: 594 YEGAIVIEPLKGFYQVPIATLDFTSLYPSIMMAHNLCYST----YIANSDLAAKLNLVEG 649
Query: 682 ----------YLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ--YDIRQK 729
+ G+LP+ ++ L+ +R++ K+ +K +D + D RQ
Sbjct: 650 RDYKRTPNNDLFAVASLRKGLLPTILEDLLSARKRAKSDLKN---ETDPFKRAVLDGRQL 706
Query: 730 ALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKS-----------LVE---- 774
ALK++ANS+YG G + +++ VTA GR ++ TK LVE
Sbjct: 707 ALKISANSVYGFTGATIGKLPLLAISSSVTAYGRVMIEQTKQASHFLIRYAILLVEEKFQ 766
Query: 775 -----NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKY 828
+ +++YGDTDS+M+ V + +G + + + K + LD + VY
Sbjct: 767 VANGYKHDAQIVYGDTDSVMVKFGVESVEESMALGREAATYVTSHFDKPINLDFEKVYYP 826
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
LL+ KK+YA L + S+ + + KG++ VRRD L S + + ++L
Sbjct: 827 YLLINKKRYAGLYWTNPSHHDKL---DAKGIETVRRDSCSLVSTVIETSLRKLL------ 877
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+D + E++K++ +DL V L+ L I+K L KA EY ++A H ++A R+
Sbjct: 878 ---IDRDPKAAEEYVKRVISDLLQNRVDLSKLVISKALGKA--EYAAKQA--HNELAERM 930
Query: 949 NNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPV 1006
+ GD +SY+I + A ++A + I L++N L ID YYL Q+
Sbjct: 931 RKRDPGTAPALGDRVSYVIIKGSKDAPAYEKAEDPIYVLEHN--LPIDTKYYLENQLSKP 988
Query: 1007 VTRLLEPIEGTDA--------------------------VRIAECLGLDTSLYRSQI 1037
+ R+ EP+ G A VR A CLG L R+ I
Sbjct: 989 LLRIFEPVLGEKASSLLAGDHTRSISVAAPSSGGIMRFTVRTATCLGCKVPLKRNDI 1045
>gi|332796355|ref|YP_004457855.1| DNA polymerase B exonuclease [Acidianus hospitalis W1]
gi|332694090|gb|AEE93557.1| DNA polymerase B exonuclease [Acidianus hospitalis W1]
Length = 780
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 216/458 (47%), Gaps = 66/458 (14%)
Query: 561 RITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKG 620
++T + G L + M R E+LL+ ++ + ++P N+ E
Sbjct: 361 QLTMITGLPLDQLSMASVGYRVEWLLMREAYKFNEIIP------NRVE------------ 402
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
R+ +Y GGLV+ P G ++ + ++DF+S+YPSI+ +YNI T+ +D C
Sbjct: 403 REYESYKGGLVISPAPGIHEG-VYVLDFSSMYPSIMIKYNIGPDTLVKGECED------C 455
Query: 681 EYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL-LMQYDIRQKALKLT 734
PE + G ++KLVE R+ VK+ K P + + D RQ+ALK+
Sbjct: 456 WVAPEVGHKFRKSPDGFYKRILQKLVEERKAVKS--KIPTEKDEYERRRLDERQRALKVM 513
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
AN+ YG +G+ +R++++ A VTA GREI+ + LVE ++VIYGDTDS+ I +
Sbjct: 514 ANAFYGYMGWLGARWYSKEGAEAVTAWGREIISSVAKLVEERGFKVIYGDTDSVFIKGSG 573
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQ 854
N V +I N+ E ++ KK+YA ++ +GK+
Sbjct: 574 NVDSLVNEIMNKFGLEIKIDKIYKKI--------FFTENKKRYAGIT----EDGKI---- 617
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGF 914
+I G + VR DW LA + + VI +IL +D+ ++ + + + KIR
Sbjct: 618 DIVGFEAVRGDWCDLAKDLQRRVIEKILTS------GVDEAVKLVRDVIMKIRRKE---- 667
Query: 915 VPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEA 974
VP+ L I K L K+ EEY PHV A + K G I Y+I + +
Sbjct: 668 VPIQDLVIWKSLDKSLEEY--EVDAPHVNAAKKAMKAGYVIFK-GGKIGYVIVKGSGKIS 724
Query: 975 ATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
Y N +ID++YY+ +QI P R+LE
Sbjct: 725 ERAEPY----FMVNDINRIDIDYYIDKQIVPSAMRILE 758
>gi|401626408|gb|EJS44355.1| cdc2p [Saccharomyces arboricola H-6]
Length = 1097
Score = 147 bits (370), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 221/445 (49%), Gaps = 49/445 (11%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + ++ +D I
Sbjct: 587 YEGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKGTVERLDFKLDEDYVI 646
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T ++ + GILP + +L+ +R++ K ++ D+L + RQ ALK++
Sbjct: 647 TPNGDFFVTAKRRRGILPIILDELISARKRAKKDLRDEKDPFKRDVL---NGRQLALKIS 703
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VTA GR ++L TK+ V+ + V+YGDT
Sbjct: 704 ANSVYGFTGATVGKLPCLAISSSVTAYGRTMILKTKNAVQEKYCIKNGYTHDAVVVYGDT 763
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + L+K + L+ + Y LL+ KK+YA L
Sbjct: 764 DSVMVKFGTTDLKEAMDLGTEAAKYVSTLFKHPINLEFEKAYFPYLLINKKRYAGLF--- 820
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
++ + + KG+ VRRD L S V+ +IL E+ ++D L + E +
Sbjct: 821 WTSPEKFDKLDQKGLASVRRDSCSLVSIVMNKVLKKILIER-----NVDGALAFVKETI- 874
Query: 905 KIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISY 964
D+ + V ++ L I+K L AP YT+ + PH +A R+ GD + Y
Sbjct: 875 ---NDILHNKVDISKLIISKTL--AP-NYTNPQ--PHAVLAERMKRREGVGPNVGDRVDY 926
Query: 965 IICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG---TDAV 1020
+I G ++ RA + + L+NN +++D YYL+ Q+ + ++ PI G + +
Sbjct: 927 VII--GGNDKLYNRAEDPLFVLENN--IQVDSRYYLTNQLQNPIISIVAPIIGDKQANGM 982
Query: 1021 RIAECLGLDTSLYRSQIKESIQQSE 1045
+ + + ++T + + I++ E
Sbjct: 983 FVVKSIKINTGSQKGGLMSFIKKVE 1007
>gi|66475912|ref|XP_627772.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5' exonuclease;
RNAseH fold [Cryptosporidium parvum Iowa II]
gi|32399018|emb|CAD98258.1| DNA polymerase family B subunit, probable [Cryptosporidium parvum]
gi|46229188|gb|EAK90037.1| DNA polymerase delta catalytic subunit. DNAQ-like 3'-5' exonuclease;
RNAseH fold [Cryptosporidium parvum Iowa II]
Length = 1084
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 235/479 (49%), Gaps = 65/479 (13%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I + V G + L G+ + +L ++++P KN+ +G+
Sbjct: 518 IEMARVTGTTIDILLSRGQQIKVTSQILRKCKSTNFLMPTV---KNQSDGDN-------- 566
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI--PVRM------L 671
Y G VLEP KGFY I +DF SLYPSI+ +NIC++T+ P+ + L
Sbjct: 567 -----QYEGATVLEPLKGFYKDPISTLDFASLYPSIMIAHNICYSTLIPPLNLKNVPEDL 621
Query: 672 QDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQ---PNLSSDLLMQYDIRQ 728
+ + T L V GILP +++L+ +R++ K M++ P L S L + RQ
Sbjct: 622 RKTSPTGHSFVL--SSVRKGILPLIVEELIAARKKAKKEMEEATDPTLISIL----NGRQ 675
Query: 729 KALKLTANSMYGCLG-FPNSRFFAQPLAALVTAKGREILLNTKSLVENL---------NY 778
ALK +ANS+YG G + L+ +T+ GR ++ TK+ VE + +
Sbjct: 676 LALKTSANSVYGYTGAVAGGQLPCLELSTSITSYGRAMIDITKNEVEKIYRKENGYSADA 735
Query: 779 EVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY-KQLELDIDGVYKYMLLLKKKKY 837
+V+YGDTDS+MI V+D K+G + + +KL+ K ++L+ + VY LL+ KK+Y
Sbjct: 736 KVVYGDTDSVMIQFGVSDIGEAMKLGLEAATSISKLFVKPIKLEFEKVYCPFLLMNKKRY 795
Query: 838 AALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQ 897
A + N + + KG++ VRRD L + V+ +IL +D ++
Sbjct: 796 AGV---LFKNPQFHERIDCKGIETVRRDNCLLVQKVVDTVLKKIL---------VDKDVE 843
Query: 898 NIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLK 957
++ + + +DL + L+LL ++K L K ++YT + L HV++A RL +
Sbjct: 844 AAKQYTRNVISDLLKNKIDLSLLVVSKSLGK--DDYTAK--LAHVELAKRLKLRDPGSAP 899
Query: 958 Q-GDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPI 1014
GD +SY++ + + RA + + L+NN L ID +Y+ + V R+ E +
Sbjct: 900 NIGDRVSYVVIKGAKGQPQYDRAEDPLYVLENN--LAIDTQHYV-DTLKSSVIRVFEGV 955
>gi|282163973|ref|YP_003356358.1| family B DNA polymerase [Methanocella paludicola SANAE]
gi|282156287|dbj|BAI61375.1| family B DNA polymerase [Methanocella paludicola SANAE]
Length = 799
Score = 146 bits (369), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 203/425 (47%), Gaps = 63/425 (14%)
Query: 611 ETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRM 670
E GE +G + Y GG V P KG + K + +DF+++YPSI+ YNI T+
Sbjct: 391 EYGELIPSRGGEVETYLGGFVFPPVKGIH-KNVASLDFSAMYPSIMITYNISPDTVC--- 446
Query: 671 LQDSDITTLCEYLPEHQVD-------TGILPSEIKKLVESRRQVK---ALMKQPNLSSDL 720
D C Y P +V G ++ LV R +K ALM + + +
Sbjct: 447 ---KDCNVEC-YPPAPEVGHCFRKEPEGFFTRILRSLVSHRSALKKKLALMDKKDRDYKM 502
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEV 780
L DIRQK +K+ N+ YG G+ ++++ + A +A GR + + + + EV
Sbjct: 503 L---DIRQKTIKILTNAFYGYTGWAQAKWYRRECAEATSAWGRYFIKKANDIAQAMGLEV 559
Query: 781 IYGDTDSLMISC----NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KK 835
+YGDTDSL ++ + D S F ++K E L++D+D +Y+ + + KK
Sbjct: 560 LYGDTDSLFVTLKDGGRLPDITSAFI--KKVKEEL-----PLDMDVDNIYRSIFFTESKK 612
Query: 836 KYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDR 895
+YA L+ S G+++ ++G++V R DW +LA E VI IL+E++
Sbjct: 613 RYAGLT----SKGEIV----VRGLEVRRGDWCELAKELQSEVIRIILEEEN--------- 655
Query: 896 LQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKK 955
+ + +K +++ G VPL L I K LTK E Y +A HV+ A R +
Sbjct: 656 PEKAVKFVKDTISEVKEGMVPLDKLVIHKTLTKGVESYESAQA--HVKAAERAREMDMSA 713
Query: 956 LKQGDTISYIICEDGTSEAATQRAYNIEELK--NNSKL-------KIDVNYYLSQQIHPV 1006
G ISY+I + G ++RAY ++ + KL ++D YY+ +Q+ P
Sbjct: 714 -SVGSKISYVIVK-GPGGTLSERAYPVDMFSKFKDGKLYAKDKTYELDAEYYVDKQLIPT 771
Query: 1007 VTRLL 1011
R+L
Sbjct: 772 ALRIL 776
>gi|83642849|ref|YP_438136.1| ORF9 [Ovine herpesvirus 2]
gi|61970963|gb|AAX58048.1| ORF9 [Ovine herpesvirus 2]
Length = 998
Score = 146 bits (368), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 227/509 (44%), Gaps = 85/509 (16%)
Query: 557 MEKIRITNVC--GNVLSRTLMG-GRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
M I IT + N+ R ++ G+ R LL A E+ Y+LP G
Sbjct: 498 MTHIEITEIAKIANIPPRRVITDGQQIRVFACLLAAAQEQGYILPMPTAGAT-------- 549
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQ 672
+ Y G V+ P GFY+ ++++DF SLYPSIIQ +N+C++T IP L
Sbjct: 550 ----------SGYQGATVINPISGFYNTPVLVVDFASLYPSIIQAHNLCYSTIIPHENLS 599
Query: 673 DSDITTLCEY-------LPEHQV----DTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
+ T +Y P H V +L S +K + R+ ++ ++Q L
Sbjct: 600 NFPDLTPNDYETFFISSGPVHFVKKHKSESLLASLLKTWLAKRKAIRKELEQCQ-DEKLR 658
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN---- 777
D +Q A+K+T NS+YG G + +A VT +GR +L TK VENL+
Sbjct: 659 AILDKQQLAIKVTCNSVYGFTGVASGMLPCLMIAETVTLQGRTMLEKTKQFVENLDVQSL 718
Query: 778 -------------------YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY--K 816
+ V+YGDTDSL I+C D D+V + +++ S + L
Sbjct: 719 QQICPTQTLKIHAQHPTPRFTVVYGDTDSLFINCEGFDMDTVLEFSDRLASHTSSLLFSA 778
Query: 817 QLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKF 876
++L+ + V++ +LLL KK+Y + LSN K++ +KGVD+VR+ + +
Sbjct: 779 PIKLESEKVFQCLLLLTKKRYVGI----LSNNKIL----MKGVDLVRKTACTYVQDVTRS 830
Query: 877 VI------------SQILDEQ---SYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLE 921
V+ +Q L +Q S + L + + + + +DL N VPL L
Sbjct: 831 VLELILRDSNVKAAAQTLSQQPVASCYKHGLPIGFLAVIDILNQSYSDLKNNRVPLARLT 890
Query: 922 ITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYN 981
+ + +K EY LPH+ V +L N + + D ISY+ E + + A +
Sbjct: 891 YSTEFSKPFSEYKTSN-LPHLAVYKKLAERNEELPQVHDRISYVFVE-ASGSLVSDMAED 948
Query: 982 IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ N KL + ++Y + I V L
Sbjct: 949 PNYAEQN-KLPVASDWYFDKVIRGVANIL 976
>gi|332241130|ref|XP_003269738.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
subunit, partial [Nomascus leucogenys]
Length = 1071
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 229/491 (46%), Gaps = 69/491 (14%)
Query: 549 KYEVQCNQMEKIRITNV-CGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKK 607
+ V N +E R+T V +LSR G + + LL A HE ++P K
Sbjct: 525 RLMVLVNAVEMARVTGVPLSYLLSR---GQQVKVVSQLLRQAMHE-GLLMP-----VVKS 575
Query: 608 EGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI- 666
EG E Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT+
Sbjct: 576 EGGED-------------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLL 622
Query: 667 ------PVRMLQDSDI-TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSD 719
+ + +D I T + + V G+LP ++ L+ +R++ KA + + +D
Sbjct: 623 RPGAAQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELAK---ETD 679
Query: 720 LLMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE--- 774
L + D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE
Sbjct: 680 PLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKY 739
Query: 775 ------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYK 827
+ + +V+YGDTDS+M V+ +G + + + + L+ + VY
Sbjct: 740 TVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYF 799
Query: 828 YMLLLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQ 885
LL+ KK+YA L S + +M C KG++ VRRD L + + ++L
Sbjct: 800 PYLLISKKRYAGLLFSSRPDAHDRMDC----KGLEAVRRDNCPLVANLVTASLRRLL--- 852
Query: 886 SYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVA 945
+D + H + + +DL + ++ L ITK+ P Y + +P
Sbjct: 853 ------IDRDPEGAVAHAQDVISDLLCNRIDISQLVITKE----PRVYRETSVVP--TNG 900
Query: 946 LRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHP 1005
+R + S GD + Y+I AA ++ + + +S L ID YYL QQ+
Sbjct: 901 MRKRDPGSAP-SLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHS-LPIDTQYYLEQQLAK 958
Query: 1006 VVTRLLEPIEG 1016
+ R+ EPI G
Sbjct: 959 PLLRIFEPILG 969
>gi|78127846|gb|ABB22230.1| DNA polymerase-like protein [Ovine herpesvirus 2]
Length = 998
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 227/509 (44%), Gaps = 85/509 (16%)
Query: 557 MEKIRITNVC--GNVLSRTLMG-GRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
M I IT + N+ R ++ G+ R LL A E+ Y+LP G
Sbjct: 498 MTHIEITEIAKIANIPPRRVITDGQQIRVFACLLAAAQEQGYILPMPTTGAT-------- 549
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT-IPVRMLQ 672
+ Y G V+ P GFY+ ++++DF SLYPSIIQ +N+C++T IP L
Sbjct: 550 ----------SGYQGATVINPISGFYNTPVLVVDFASLYPSIIQAHNLCYSTIIPHENLS 599
Query: 673 DSDITTLCEY-------LPEHQV----DTGILPSEIKKLVESRRQVKALMKQPNLSSDLL 721
+ T +Y P H V +L S +K + R+ ++ ++Q L
Sbjct: 600 NFPDLTPNDYETFFISSGPVHFVKKHKSESLLASLLKTWLAKRKAIRKELEQCQ-DEKLR 658
Query: 722 MQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLN---- 777
D +Q A+K+T NS+YG G + +A VT +GR +L TK VENL+
Sbjct: 659 AILDKQQLAIKVTCNSVYGFTGVASGMLPCLMIAETVTLQGRTMLEKTKQFVENLDVQSL 718
Query: 778 -------------------YEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY--K 816
+ V+YGDTDSL I+C D D+V + +++ S + L
Sbjct: 719 QQICPTQTLKIHAQHPTPRFTVVYGDTDSLFINCEGFDMDTVLEFSDRLASHTSSLLFSA 778
Query: 817 QLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKF 876
++L+ + V++ +LLL KK+Y + LSN K++ +KGVD+VR+ + +
Sbjct: 779 PIKLESEKVFQCLLLLTKKRYVGI----LSNNKIL----MKGVDLVRKTACTYVQDVTRS 830
Query: 877 VI------------SQILDEQ---SYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLE 921
V+ +Q L +Q S + L + + + + +DL N VPL L
Sbjct: 831 VLELILRDSNVKAAAQTLSQQPVASCYKHGLPIGFLAVIDILNQSYSDLKNNRVPLARLT 890
Query: 922 ITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYN 981
+ + +K EY LPH+ V +L N + + D ISY+ E + + A +
Sbjct: 891 YSTEFSKPFSEYKTSN-LPHLAVYKKLAERNEELPQVHDRISYVFVE-ASGSLVSDMAED 948
Query: 982 IEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
+ N KL + ++Y + I V L
Sbjct: 949 PNYAEQN-KLPVASDWYFDKVIRGVANIL 976
>gi|50308039|ref|XP_454020.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643155|emb|CAG99107.1| KLLA0E01607p [Kluyveromyces lactis]
Length = 1101
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 200/405 (49%), Gaps = 54/405 (13%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EPK+G+YD I +DF+SLYPSI+ +N+C+TT + +++ +D +
Sbjct: 585 YEGATVIEPKRGYYDVPIATLDFSSLYPSIMMAHNLCYTTLCDRATVQRLNLKLDEDYIV 644
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T + +V G+LP +++L+ +R++ K +K D+L + RQ ALK++
Sbjct: 645 TPNNDIFVTSKVRRGVLPEILEELIGARKKAKFDLKNETDPFKRDVL---NGRQLALKIS 701
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN---------LNYEVIYGDT 785
ANS+YG G + +++ VT+ GR ++ TK+ VEN + V+YGDT
Sbjct: 702 ANSVYGFTGATVGKLPCLAISSSVTSFGRTMIETTKNAVENKYCIKNGASHDAVVVYGDT 761
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D + K+G + + + L+K ++L+ + VY LL+ KK+YA L
Sbjct: 762 DSVMVKFGTTDLEESMKLGAEAAAYVSSLFKDPIKLEFEKVYFPYLLINKKRYAGLY--- 818
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK 904
+N K + KG+ VRRD L S V+ +IL ++D +Q I E +
Sbjct: 819 WTNPKKYDKLDQKGLASVRRDSCPLVSIVMNKVLKKIL-----IGRNVDGAMQFIRETID 873
Query: 905 KI---RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDT 961
I R D+ + TL AP YT+ + PH +A R+ + GD
Sbjct: 874 DILQNRCDISKLIISKTL---------AP-NYTNPQ--PHAVLAERMKKRDGVGPNVGDR 921
Query: 962 ISYIICEDGTS--EAATQRAYNIEELKNNSKLKIDVNYYLSQQIH 1004
+ Y+I G A Y +E+ L++D YYLS Q+
Sbjct: 922 VDYVIIGGGDKLFNRAEDPLYVLEQ-----NLQLDSIYYLSNQLQ 961
>gi|424813627|ref|ZP_18238815.1| DNA polymerase elongation subunit, family B [Candidatus Nanosalina
sp. J07AB43]
gi|339758573|gb|EGQ43828.1| DNA polymerase elongation subunit, family B [Candidatus Nanosalina
sp. J07AB43]
Length = 410
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 197/421 (46%), Gaps = 71/421 (16%)
Query: 621 RKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLC 680
+ + AY GG V P+ G YD I + DF SLYP+++ +NI T+ + ++
Sbjct: 24 QNQGAYEGGFVYTPESGLYDD-ISVFDFRSLYPTVMVAHNISPETLNLENCSET------ 76
Query: 681 EYLPEH------QVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
+ PE Q + G P I+ LVESR ++K MK+ + S + RQ+A K+
Sbjct: 77 -FQPEGFDFSFCQDNQGFFPELIQGLVESRYEIKGEMKKLDKDSIEYERIYSRQQAQKVL 135
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
ANS YG LG+ +R++++ A T GR+ + +T + +E++YGDTDS+ +S
Sbjct: 136 ANSFYGYLGYNGARWYSKECAQATTFMGRKYIEDTIETAREMGFEIVYGDTDSVFLSG-- 193
Query: 795 NDYDSVFKIGNQIKSECNK-LYKQLELDIDGVYKYMLLLK-------KKKYAALSISKLS 846
D + + N+ + N L + +EL+ +G +K KKKYA + +
Sbjct: 194 ---DDIEERKNEFLEKVNSDLPEFMELEFEGFFKTGFFTSKDSGEGAKKKYALMDEEE-- 248
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
+I G + VRRDWS +A + + V+ ++L++ ++ E +K
Sbjct: 249 ------DMKITGFEQVRRDWSSVAKDTQRKVLQKVLNK----------KVDQAAEIVKNT 292
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGD------ 960
L N V + L I LTK PE+Y PHV+ A K +++G+
Sbjct: 293 INSLKNQEVDVEKLRIFTTLTKPPEDY--ESTAPHVEAA-------KKAIERGEDIEPET 343
Query: 961 TISYIICEDGTSEAATQRAYNIEELKNNSKL--KIDVNYYLSQQIHPVVTRLLEPIEGTD 1018
TI Y+I T+ + NI ++ D +YY+ Q+ P R+L+ T+
Sbjct: 344 TIGYVI---------TRGSGNISARAETAEFADSYDPDYYIDNQVIPAAVRVLKVFGYTE 394
Query: 1019 A 1019
A
Sbjct: 395 A 395
>gi|163916151|gb|AAI57513.1| Unknown (protein for MGC:180510) [Xenopus (Silurana) tropicalis]
Length = 911
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 200/419 (47%), Gaps = 69/419 (16%)
Query: 555 NQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGE 614
N ME R+T V LS L G+ + LL ++ V+P K EG E
Sbjct: 536 NYMEMARVTGV---PLSYLLSRGQQIKVVSQLLRQAMKQDLVMP-----VVKSEGGED-- 585
Query: 615 ANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDS 674
Y+G V+EP KG+YD I +DF+SLYPSI+ +N+C+TT +LQ
Sbjct: 586 -----------YTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTT----LLQSG 630
Query: 675 DI------------TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
I T + + + G+LP ++ L+ +R++ K +K+ +D
Sbjct: 631 SIDKYGLSPEDFIKTPTGDCFVKASIRKGLLPEILENLLCARKRAKTELKK---ETDPFK 687
Query: 723 Q--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVEN----- 775
Q D RQ ALK++ANS+YG G + ++ VT GR+++ TK LVE+
Sbjct: 688 QKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLD 747
Query: 776 ----LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLYK-QLELDIDGVYKYML 830
+ +VIYGDTDS+M V +IG + + + ++L+ + VY L
Sbjct: 748 NGYKADAKVIYGDTDSVMCKLGVQTVGETMEIGREAAEWVSSHFTPPIKLEFEKVYFPYL 807
Query: 831 LLKKKKYAALSISKLSNG--KMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
L+ KK+YA L S +N KM C KG++ VRRD L + + +IL
Sbjct: 808 LINKKRYAGLYFSSSANTHDKMDC----KGIETVRRDNCPLVANLINTCLQKIL------ 857
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALR 947
+D EH K + +DL + ++ L ITK+LT+ +EY ++A HV++A R
Sbjct: 858 ---IDRDPMGAVEHAKDVISDLLCNRIDISQLVITKELTRTADEYAGKQA--HVELAER 911
>gi|84998308|ref|XP_953875.1| DNA polymerase delta catalytic subunit (Pold1 ) [Theileria annulata]
gi|65304872|emb|CAI73197.1| DNA polymerase delta catalytic subunit (Pold1 homologue), putative
[Theileria annulata]
Length = 1088
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 216/434 (49%), Gaps = 60/434 (13%)
Query: 618 GKGRKKA---AYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-------- 666
G G+ + +Y G VLEP KG++ I ++DF SLYPSI+ +NIC++T+
Sbjct: 532 GGGKNSSNENSYEGATVLEPLKGYHKNPISVLDFQSLYPSIMIAHNICYSTLLNYNNINN 591
Query: 667 --PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQ- 723
P +++ +C ++ ++ GILP ++ L+ R++ K +M N D +++
Sbjct: 592 YRPEDVVRVPGYNDIC-FISVNK-RKGILPIIVENLINERKKAKKMM---NECKDEMLKK 646
Query: 724 -YDIRQKALKLTANSMYGCLGFPNSRFF-AQPLAALVTAKGREILLNTKSLVE------- 774
YD RQ ALK+T NS+YG G + F +A +T+ GR +++NTK+L+E
Sbjct: 647 VYDGRQLALKITTNSVYGYTGATSGGFLPCIDVATAITSFGRNMIVNTKNLIEEHFTVKN 706
Query: 775 --NLNYEVIYGDTDSLMISCNVNDYDSVFKIG-NQIKSECNKLYKQLELDIDGVYKYMLL 831
+ +VIYGDTDS+MI+ +D +G N +K K + L + VYK +LL
Sbjct: 707 GFKFDSKVIYGDTDSVMINFGTDDIQEAIDLGKNAADLITSKSVKPITLLFEKVYKPLLL 766
Query: 832 LKKKKYAALSISKLSNGKMICSQEIKGVDV----------VRRDWSQLASEAGKFVISQI 881
L KK+YA L N + + KG++V VRRD+ L I Q+
Sbjct: 767 LSKKRYAGLY---YVNSEKYEKIDCKGIEVLVFVTILFQSVRRDFCLL--------IQQM 815
Query: 882 LDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPH 941
L EQ + L E +KK ++L + ++LL ITK L K E + LPH
Sbjct: 816 L-EQILYLLLVKLDLDGAIEFVKKKVSELLKNEIDVSLLVITKSLGKVDYE----QRLPH 870
Query: 942 VQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLS 1000
V++A +L + K GD ISYII + E RA + N+ L ID +YYL
Sbjct: 871 VELAKKLRKRDPGKAPGVGDRISYIIVKGTKGEPLFDRAEEPLYVTENN-LPIDTSYYL- 928
Query: 1001 QQIHPVVTRLLEPI 1014
+ V+ R+ E +
Sbjct: 929 DSLKNVLLRIFEVV 942
>gi|71406868|ref|XP_805939.1| DNA polymerase delta catalytic subunit [Trypanosoma cruzi strain CL
Brener]
gi|70869536|gb|EAN84088.1| DNA polymerase delta catalytic subunit, putative [Trypanosoma
cruzi]
Length = 833
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 204/420 (48%), Gaps = 61/420 (14%)
Query: 552 VQCNQMEKIRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEE 611
V N +E R+T V + L G+ + ++L K ++P +Y
Sbjct: 452 VVVNNVEMARVTGV---PIEWLLERGQQIKVFSMMLRKAKAKDLLVPAVEY--------- 499
Query: 612 TGEANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI----- 666
G G + Y G V+EP KGFY+ I+ +DF SLYPSII +N+C++T+
Sbjct: 500 -----SGGGGDQRGYEGATVIEPLKGFYNCPIVTLDFASLYPSIIIAHNLCYSTLVRPSD 554
Query: 667 ----PVRMLQDSDITTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLM 722
P ML T + + ++ GILP ++ L+ +R++ K+LMK + S +
Sbjct: 555 IVRYPAEMLSR---TPTGDTFVKKELFPGILPEVLQDLLAARKRAKSLMKDVPMES---L 608
Query: 723 QYDI---RQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL--N 777
+Y + RQ ALK++ANS+YG G + +++ VTA GR ++ TK LVE+L
Sbjct: 609 EYKVLNGRQLALKISANSVYGFTGAQVGKLPCLEVSSSVTAYGRLMIDQTKFLVESLYPG 668
Query: 778 YEVIYGDTDSLMISCNVN---------DYDSVFKIGNQIKSECNKLYKQLELDIDGVYKY 828
+V+YGDTDS+MI C + +Y F G + + ++L+ + VY
Sbjct: 669 VKVVYGDTDSVMIKCLTDEKGTEKERLEYAMTFGKGAA-EEVSSHFLNPIKLEFEKVYFP 727
Query: 829 MLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYT 888
LL+ KK+YA L +N + + KG++ VRRD L + V+++IL ++S
Sbjct: 728 YLLMNKKRYAGL---LWTNTERYDKLDAKGIETVRRDNCPLVASVISGVLNRILIQRS-- 782
Query: 889 DYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRL 948
+ + E +K DL + ++ L ITK +KA EY +A HV + R+
Sbjct: 783 -------VDSAVEFVKGTIRDLLLNRLDISHLVITKTFSKAENEYAGAQA--HVALVERM 833
>gi|339245491|ref|XP_003378671.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
gi|316972406|gb|EFV56084.1| DNA polymerase delta catalytic subunit [Trichinella spiralis]
Length = 1069
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 214/464 (46%), Gaps = 91/464 (19%)
Query: 599 DKQYGKNKKEGEETGEAN----KGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPS 654
D+ Y +G +T E N + Y+G V+EP KG+Y+K I+ +DF SLYPS
Sbjct: 535 DQSYFTTDAQGSQTREQNLFLPAVRSEVGEDYTGATVIEPIKGYYNKPIVTLDFASLYPS 594
Query: 655 IIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDT-------------GILPSEIKKLV 701
I+ +N+C+TT+ ++Q+ T + PE + T G+LP ++ L+
Sbjct: 595 IMMAHNLCYTTL---IMQE---TVRSQLSPEDYIKTPSGHYFVKKDKCKGLLPEILENLL 648
Query: 702 ESRRQVKALMKQPNLSSDLLMQ--YDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVT 759
+R+ VK MK + +D + D RQ ALK++ANS+YG G + ++ VT
Sbjct: 649 AARKAVKQQMK---VETDAFRRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVT 705
Query: 760 AKGREILLNTKSLVE---------NLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSE 810
A GR ++ TK VE + + +VIYGDTDS+M+ ++ + ++G + +
Sbjct: 706 AFGRMMIDKTKEEVEKQFVKANGYSADAKVIYGDTDSVMVDFGLDTLEKAMEMGREAAAF 765
Query: 811 CN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKL-SNGKMICSQEIKGVDVVRRDWSQ 868
+ K ++L+ + VY LL+ KK+YA L + S KM C KG++ VRRD
Sbjct: 766 VSAKFVNPIKLEFEKVYFPYLLISKKRYAGLYFTNTQSYDKMDC----KGIETVRRDNCP 821
Query: 869 LASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTK 928
L + ++ ++KI D D P +E TK
Sbjct: 822 LVANV-------------------------LNTCLEKILIDRD----PNKAVEYTKM--- 849
Query: 929 APEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYIICEDGTSEAATQRAYNIEELKN 987
EY ++A HV++A R+ + GD + Y+I AA +A + + +
Sbjct: 850 ---EYAAKQA--HVELAARMRKRDPGSAPHLGDRVPYVIIAASKGTAAYMKA-EVSSIFH 903
Query: 988 NSK---------LKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
SK + ID YYL Q+ + R+ +PI G A I
Sbjct: 904 TSKDPIYVLENSIPIDTQYYLENQLSKPLLRIFDPILGDKAESI 947
>gi|386002196|ref|YP_005920495.1| DNA polymerase [Methanosaeta harundinacea 6Ac]
gi|357210252|gb|AET64872.1| DNA polymerase [Methanosaeta harundinacea 6Ac]
Length = 931
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 221/496 (44%), Gaps = 83/496 (16%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I + G++L + GG++ E L F E+ V+P K + + +
Sbjct: 406 IALAQTSGSLLQDVIDGGQTGMVENFLFRKFQERGRVIPPKP----------DADLSSAR 455
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-- 677
+ + GG VLEPKKG + +IL D+ SLYPSI+ +N+C++T+ S
Sbjct: 456 AAQSSELKGGEVLEPKKGLVEDVLIL-DYRSLYPSIMMAHNLCYSTVVTDERPPSGGVVK 514
Query: 678 --TLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTA 735
+ E++ + GI+P + L+ R +K MK + ++ D +Q ALK+
Sbjct: 515 PPSGGEFVLPGEA-PGIVPGVLSDLLAQRTDIKRRMKSASEEERSIL--DAQQYALKILL 571
Query: 736 NSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENL------------------- 776
NS YG G+ +R ++ PLA VT+ GR +LNTK +VE +
Sbjct: 572 NSFYGYSGYARARLYSLPLANAVTSFGRTNILNTKRMVEEIGSVYVRDGKALLPEEMASA 631
Query: 777 --------------NYEVIYGDTDSLMISCNVNDYDSVFK-------IGNQI-KSECNKL 814
+ V+YGDTDS+ I V +G +I ++ ++L
Sbjct: 632 SGDSFPAVGEFKRFDLSVVYGDTDSVFIRLKPFGGSGVKPTLEEAELVGGKIAETVTSRL 691
Query: 815 YKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAG 874
+EL + + L L KK+YA K+ G+ +++G++ VRRDW +L S+
Sbjct: 692 PPPMELVFEAFARRGLFLVKKRYALWVFEKV-GGEWRDKIKVRGMETVRRDWCELTSKTL 750
Query: 875 KFVISQILDEQSYTDY-----SLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKA 929
+ +L E + S+ DRLQ R DL L L +T++ TK+
Sbjct: 751 NRSLELVLMEGRVEEAVDLAKSVIDRLQ---------RLDLRKDPEILEDLVLTRRYTKS 801
Query: 930 PEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGT--SEAATQRAYNIEELKN 987
Y +++ PHVQ+A ++ GD + ++I + A +Y +E
Sbjct: 802 TASYKNKQ--PHVQLAEKMRARGGPVPSVGDRVPFVIVRGRGLFVDRAEDPSYALE---- 855
Query: 988 NSKLKIDVNYYLSQQI 1003
+ L ID +YY+++QI
Sbjct: 856 -NGLLIDTDYYINKQI 870
>gi|67900676|ref|XP_680594.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|40742186|gb|EAA61376.1| hypothetical protein AN7325.2 [Aspergillus nidulans FGSC A4]
gi|259483322|tpe|CBF78614.1| TPA: catalytic subunit of DNA polymerase delta (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1044
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 196/385 (50%), Gaps = 39/385 (10%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----PVRMLQDSD--ITT 678
Y G V+EP + +YD I +DF SLYPSIIQ +N+C+TT+ M +D D +T
Sbjct: 576 YEGATVIEPIRDYYDVPIATLDFASLYPSIIQAHNLCYTTLLNKNSVAGMKKDEDYIVTP 635
Query: 679 LCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDI--RQKALKLTAN 736
+ +V G+L +++L+ +R++ K + Q +D + + RQ ALK++AN
Sbjct: 636 NGDMFCTPKVRKGLLSQILEELLSARKKAKKELAQ---ETDPFKKAVLNGRQLALKVSAN 692
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDTDS 787
S+YG G + +A+ T+ GR+++ TK VE + + +VIYGDTDS
Sbjct: 693 SVYGLTGATVGKLPCLAIASSTTSYGRQMIEKTKQEVEARYTIANGYSHDAKVIYGDTDS 752
Query: 788 LMISCNVNDYDSVFKIGNQIKSEC-NKLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
+M+ V + + K+G + +K K ++L+ + VY LL+ KK+YA L +
Sbjct: 753 VMVKFGVTELEEAMKLGQEASEYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLY---WT 809
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKI 906
N K + KG++ VRRD L + V+ +IL +D ++ E++K
Sbjct: 810 NPKKYDKMDTKGIETVRRDNCLLVQNVIETVLHKIL---------IDRDVEAAQEYVKDT 860
Query: 907 RTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISYI 965
+DL + ++ L ITK LTK + YT ++A HV++A R+ ++ GD ++Y+
Sbjct: 861 ISDLLQNKIDMSKLVITKALTK--DSYTAKQA--HVELAERMRKRDAGSAPTLGDRVAYV 916
Query: 966 ICEDGTSEAATQRAYNIEELKNNSK 990
I + E A + L +K
Sbjct: 917 IVKGTAHEVHRHSAPTMGGLMKFTK 941
>gi|10140935|ref|NP_065512.1| DNA Polymerase [Alcelaphine herpesvirus 1]
gi|82046321|sp|O36363.1|DPOL_ALHV1 RecName: Full=DNA polymerase catalytic subunit
gi|2337976|gb|AAC58060.1| DNA Polymerase [Alcelaphine herpesvirus 1]
Length = 1026
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 233/512 (45%), Gaps = 92/512 (17%)
Query: 557 MEKIRITNVC--GNVLSRTLMG-GRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETG 613
M I IT + N+ +R ++ G+ R LL A E+ Y+LP G +EG
Sbjct: 527 MTHIEITEIAKIANIPTRRVLSDGQQIRVFTCLLAAAQERDYILPMPVTGS--QEG---- 580
Query: 614 EANKGKGRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI------- 666
Y G V+ P GFY+ ++++DF SLYPSIIQ +N+C++T+
Sbjct: 581 ------------YQGATVINPISGFYNTPVLVVDFASLYPSIIQAHNLCYSTLIKQQDLP 628
Query: 667 PVRMLQDSDITTL------CEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDL 720
L +D T ++ +H+ ++ +L S +K + R+ +K ++Q + +
Sbjct: 629 KFTNLTANDYETFMISGGPVHFVKKHKTES-LLASLLKTWLAKRKSIKKELEQCQ-DAKM 686
Query: 721 LMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYE- 779
D +Q A+K+T NS+YG G + +A VT +GR +L TK VEN+ E
Sbjct: 687 KTILDKQQLAIKVTCNSVYGFTGVASGMLPCLMIAETVTLQGRTMLEKTKQFVENVTVEY 746
Query: 780 ---------------------VIYGDTDSLMISCNVNDYDSVFKIGNQIKSECNKLY--K 816
V+YGDTDSL I C D+V K G+ + S + +
Sbjct: 747 LQKICNFEVQCLPQHPNPKFRVVYGDTDSLFIKCEGFAMDTVIKFGDALASHTSSVLFAS 806
Query: 817 QLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKF 876
++L+ + V+K ++LL KK+Y + LSN K++ +KGVD+VR+ E +
Sbjct: 807 PIKLESEKVFKCLMLLTKKRYVGI----LSNNKIL----MKGVDLVRKTACVYVQEVTRA 858
Query: 877 VISQILDEQ---------SYTDYSLDDRLQNIHEHMKKI------RTDLDNGFVPLTLLE 921
V+ +L ++ SY+ + + + + +K I +DL + VP+ L
Sbjct: 859 VLELLLRDEEVKVAAQTLSYSPVANCFKTEPLLGFLKIIDILNQSYSDLKSNKVPVANLT 918
Query: 922 ITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDG---TSEAATQR 978
+ +L+K EY LPH+ V +L N + + D ISY+ + S+ A
Sbjct: 919 YSTELSKPFTEYKTTN-LPHLAVYKKLAMRNEELPQIHDRISYVFVKSNGHLVSDMAEDP 977
Query: 979 AYNIEELKNNSKLKIDVNYYLSQQIHPVVTRL 1010
Y +K+ I ++Y + IH V L
Sbjct: 978 TY-----AEQNKIPIASDWYFDKIIHGVANIL 1004
>gi|385805456|ref|YP_005841854.1| family B-type DNA polymerase [Fervidicoccus fontis Kam940]
gi|383795319|gb|AFH42402.1| family B-type DNA polymerase [Fervidicoccus fontis Kam940]
Length = 799
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 220/459 (47%), Gaps = 63/459 (13%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I+++ + G L + + R E+ L+ + + ++P+++
Sbjct: 368 IQLSGLTGIPLDQLMATSVGYRLEYYLIRKAYRFNEIVPNRE------------------ 409
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTL 679
R++ +Y G +VL+PK G ++ I ++DF S+YP+I+ +YN+ T+ D
Sbjct: 410 ERERESYKGAIVLKPKSGVHEN-IAVLDFASMYPNIMIKYNVGPDTLVKECKNDE----- 463
Query: 680 CEYLPE--HQVDT---GILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLT 734
C P+ H+ G S + L+ +R++++ +K+ D RQKA+K+
Sbjct: 464 CYVAPDVGHKFRKEPPGFFKSVLSDLLAARQKIRQQLKKLKPGDPEYNVLDERQKAIKVL 523
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISCNV 794
AN+ YG +G+ +R++ + A +TA GR+ + + L +VIYGDTDSL +
Sbjct: 524 ANASYGYMGWQGARWYCKECAEAITAWGRQNITFAIEKAKKLGLDVIYGDTDSLFVQF-- 581
Query: 795 NDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMICS 853
D + ++ N I SE LE+ ID +YK + + KK+Y ++I + +
Sbjct: 582 -DEKKINELLNIINSELG-----LEIKIDKIYKKLFFTEAKKRYVGITIDNIID------ 629
Query: 854 QEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNG 913
I G + +R DWS+++ + + I++++ E+ T+ ++ E+ K+I +L
Sbjct: 630 --IVGFEAIRGDWSEISKDI-QTEIARLILEKGTTEKAI--------EYTKEIIRNLKEK 678
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSE 973
+P+ L I K +TK EEY PHV A +L K+ GD + Y++
Sbjct: 679 KIPIDKLVIWKTITKPIEEY--EVDAPHVTAA-KLYQEYGLKISPGDKVGYVVVSGEGKI 735
Query: 974 AATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLE 1012
+ + Y L +IDV+YY+ QI P R+LE
Sbjct: 736 SEKVKPYFAATLD-----EIDVDYYVDHQIIPAAMRILE 769
>gi|74186810|dbj|BAC29884.2| unnamed protein product [Mus musculus]
Length = 427
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 217/437 (49%), Gaps = 65/437 (14%)
Query: 44 GGRAKRQKIDKTNKFAAFQKLKDLKGQGVKHKYEFTADENVYEEVSEKEYTERVLKRQED 103
RA+R+K K + A ++LK K G K+KYE +VYEEV E++Y++ V RQ+D
Sbjct: 24 ASRARREKKSKKGRQEALERLKKAKA-GEKYKYEVEDLTSVYEEVDEEQYSKLVQARQDD 82
Query: 104 DWIDDDGGDGYVEDGREIFDDDIEDVP-----QKKEKHDKRKKNKNIQNPNA--KGDIQK 156
DWI DD G GYVEDGREIFDDD+ED + + RK K+++ P+ +I+
Sbjct: 83 DWIVDDDGIGYVEDGREIFDDDLEDDALDTCGKGSDGKAHRKDRKDVKKPSVTKPNNIKA 142
Query: 157 LLANMPVKKKKKEEVQLNNDDVLADLLSEVNTTIAPTLKLNTKTNEIVIPKEEPPAPTAK 216
+ KK + V L+ DD+L D+L ++NT A ++IPK+ K
Sbjct: 143 MFIASAGKKTTDKAVDLSKDDLLGDILQDLNTETA-----QITPPPVLIPKK-------K 190
Query: 217 EYLANFSKPIKVEKKIEKPIKKEPSPLKDEIKSNDSVMEVEMNVAEQSKEE-----PVDD 271
P V P K SP+ +++ + + + AE + E P D+
Sbjct: 191 RSTGALLNPFSVHTPKAIPSGKPASPV---LRNEPLLTPIPLKRAELAGELAQPECPEDE 247
Query: 272 GLWEQMQID--DWDNSQQTQ--DVLPEQAKVELQ----IEAIESQSIEEKVDVTNVESVS 323
M+ + D+D S T+ D P AK Q +E +E ++ E+ + +E+
Sbjct: 248 QELGVMEFEDGDFDESMDTEKVDEKPVTAKTWDQETEPVERVEHEADPERGTTSYLENFL 307
Query: 324 SAVELSTSPPPQVVEKKEHKCAEWEAIQTEPST-SEPQVHSRTADDSLPLATDHENKKVF 382
V C W+ Q + S E QV S +LPL ++++VF
Sbjct: 308 PDV----------------SC--WDIDQDDESIPQEVQVDSS----NLPLVKGADDEQVF 345
Query: 383 RMFFLDAFEDIYKQPGTVYLFGKVFVKENNSHSSCCVIVQNIDRKIYLLPRSEHL----- 437
+ ++LDA+ED Y QPG V+LFGKV+++ +H SCCV+V+NI+R +Y LPR
Sbjct: 346 QFYWLDAYEDPYNQPGVVFLFGKVWIESVKTHVSCCVMVKNIERTLYFLPREMKFDLNTG 405
Query: 438 -KTKEPVSIAQVYSEFD 453
+T PV++ VY EFD
Sbjct: 406 KETAIPVTMKDVYEEFD 422
>gi|167380902|ref|XP_001735501.1| DNA polymerase delta catalytic subunit [Entamoeba dispar SAW760]
gi|165902501|gb|EDR28305.1| DNA polymerase delta catalytic subunit, putative [Entamoeba dispar
SAW760]
Length = 1077
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 217/448 (48%), Gaps = 68/448 (15%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTI-----------PVRMLQDS 674
Y G V+ P KGFY I +DF+SLYPSI+ +N+C++T+ + L+ S
Sbjct: 531 YVGATVISPIKGFYKVPISTLDFSSLYPSIMISHNLCYSTLIDGIKTRKDVPSIEFLKTS 590
Query: 675 D-------ITTLCEYLPEHQVDT-------------------GILPSEIKKLVESRRQVK 708
+ + + L E Q++ GILP ++ L+ +R+Q K
Sbjct: 591 ESEEDRKMYDQIMKKLKEKQLNVEDVELSPNGDLFVKSSKRKGILPEILENLLAARKQAK 650
Query: 709 ALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLN 768
M + + + RQ ALK++ANS+YG G + +A+ VT+ GR ++
Sbjct: 651 KDMAAATDPFKITV-LNGRQLALKVSANSVYGFTGAQIGKLPCMQIASSVTSYGRTMIEL 709
Query: 769 TKSLVEN---------LNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKS-ECNKLYKQL 818
TK+ VE + +V+YGDTDS+M+ D ++G + K + +
Sbjct: 710 TKTTVEEKYSKKNGFPWDAQVVYGDTDSVMVKFGTPDLAEAIRLGKEAAVFVTTKFPRPI 769
Query: 819 ELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVI 878
L+ + V+ LL+ KK+YA L +++ + + KG++ VRRD L K+VI
Sbjct: 770 NLEFEKVFFPYLLISKKRYAGLYFNRVDKWDHV---DTKGIETVRRDNCLLV----KYVI 822
Query: 879 SQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKA 938
+L++ LD ++ +K + +DL + L++L I+K L+K E+Y ++A
Sbjct: 823 ENVLNK-----ILLDSDVEGAINFVKNMISDLLQNKLDLSMLIISKTLSK--EDYAGKQA 875
Query: 939 LPHVQVALRLNNTN-SKKLKQGDTISYIICEDGTSEAATQRAYN-IEELKNNSKLKIDVN 996
HV++ R+ + + + GD I Y+I + A ++A + + L+NN + ID +
Sbjct: 876 --HVELVKRIRERDKTATINTGDRIPYVIIKSTKDAKAYEKAEDPLYVLENN--IPIDFD 931
Query: 997 YYLSQQIHPVVTRLLEPIEGTDAVRIAE 1024
YY+ Q+ +TR+ +PI G I E
Sbjct: 932 YYIENQLKKPLTRIFKPILGEKVSEIFE 959
>gi|295699928|ref|YP_003607821.1| DNA-directed DNA polymerase [Burkholderia sp. CCGE1002]
gi|295439141|gb|ADG18310.1| DNA-directed DNA polymerase [Burkholderia sp. CCGE1002]
Length = 794
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 205/463 (44%), Gaps = 89/463 (19%)
Query: 576 GGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPK 635
GG L + H + YV P+ G+ G AA GG V++ +
Sbjct: 376 GGSVAAFTHLYMPRMHRQGYVAPNL--------GDVAG----------AASPGGFVMDSR 417
Query: 636 KGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYLPEHQVDT-GILP 694
G YD ++L D+ SLYPSII+ + I + ML D ++ +L T LP
Sbjct: 418 PGLYDSVLVL-DYKSLYPSIIRTFLIDPLGLVEGMLHPDDAHSVPGFLGARFSRTRHCLP 476
Query: 695 SEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPL 754
S + ++ ++R K +P LS +ALK+ N+ YG LG RFF L
Sbjct: 477 SIVAQVWQAREAAKREHNKP-LS-----------QALKIIMNAFYGVLGSTGCRFFDPRL 524
Query: 755 AALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC-NVNDYDSVFKIGNQIKSECNK 813
A+ +T +G EI+ T+ L+E YEVIYGDTDS + + +D + +IG + N
Sbjct: 525 ASSITMRGHEIMHTTRELIEAQGYEVIYGDTDSTFVWLRHAHDEEDAARIGRALVEHINA 584
Query: 814 LYKQ-----------LELDIDGVYKYMLLL--------KKKKYAALSISKLSNGKMICSQ 854
++Q LEL + Y+ + KK+YA L++ L +G+
Sbjct: 585 AWRQRLQARFGIDSALELQFERHYRRFFMPTVRGAEEGSKKRYAGLTV--LPDGREDVV- 641
Query: 855 EIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK-KIRTDLDNG 913
KG++ VR DW+ LA + + + +I +Q Y DY + ++++ + LD+
Sbjct: 642 -YKGLETVRTDWTPLAQQFQQELYRRIFKQQPYQDY--------VRDYVRDTLAGRLDDQ 692
Query: 914 FVPLTLLEITKQLTKAPEEYTDRKALPHV---QVALRLNNTNSKKL--KQGDTISYIICE 968
V KQL + + Y +R PHV +VA N + L + G ISY+I
Sbjct: 693 LV------YRKQLRRPIDAY-ERNVPPHVRAARVADEFNRQQGRPLQYQNGGWISYVITV 745
Query: 969 DGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLL 1011
G T R+ ID +YL++Q+ PV +L
Sbjct: 746 AGPEPLETLRS------------AIDYEHYLTRQLQPVADAIL 776
>gi|74507171|sp|Q7SIG7.1|DPOL_DESST RecName: Full=DNA polymerase; AltName: Full=D Tok Pol
gi|6435708|pdb|1QQC|A Chain A, Crystal Structure Of An Archaebacterial Dna Polymerase D.Tok
Length = 773
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 212/438 (48%), Gaps = 55/438 (12%)
Query: 583 EFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPKKGFYDKF 642
E+ LL +E++ V P NK + E R+ +Y+GG V EP+KG ++
Sbjct: 354 EWFLLRKAYERNDVAP------NKPDERELA-------RRTESYAGGYVKEPEKGLWEN- 399
Query: 643 IILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDIT-----TLCEYLPEHQVDTGILPSEI 697
I+ +D+ SLYPSII +N+ T+ ++ D+ C+ P G +PS +
Sbjct: 400 IVYLDYKSLYPSIIITHNVSPDTLNREGCREYDVAPQVGHRFCKDFP------GFIPSLL 453
Query: 698 KKLVESRRQVKALMKQP--NLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPLA 755
L+E R++VK MK + LL D RQ+A+K+ ANS YG + N+R++ + A
Sbjct: 454 GDLLEERQKVKKKMKATVDPIERKLL---DYRQRAIKILANSYYGYYAYANARWYCRECA 510
Query: 756 ALVTAKGREILLNT-KSLVENLNYEVIYGDTDSLMISCNVNDYDSVFKIGNQIKSECN-K 813
VTA GR+ + T + + E ++V+Y DTD + D ++V + + N +
Sbjct: 511 ESVTAWGRQYIETTMREIEEKFGFKVLYADTDGFFATIPGADAETVKNKAKEFLNYINPR 570
Query: 814 LYKQLELDIDGVYKYMLLLKKKKYAALSISKLSNGKMICSQEIKGVDVVRRDWSQLASEA 873
L LEL+ +G Y+ + KKKYA + K+ +G+++VRRDWS++A E
Sbjct: 571 LPGLLELEYEGFYRRGFFVTKKKYAVID----EEDKITT----RGLEIVRRDWSEIAKET 622
Query: 874 GKFVISQILDEQSYTDYSLDDRLQNIHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEY 933
V+ IL ++ +K++ L VP L I +Q+T+ Y
Sbjct: 623 QARVLEAILKHGD---------VEEAVRIVKEVTEKLSRHEVPPEKLVIYEQITRDLRSY 673
Query: 934 TDRKALPHVQVALRLNNTNSKKLKQGDTISYIICEDGTSEAATQRAYNIEELKNNSKLKI 993
R PHV VA RL K++ G ISYI+ + G RA +E + +K +
Sbjct: 674 --RATGPHVAVAKRL-AARGIKIRPGTVISYIVLK-GPGRVG-DRAIPFDEF-DPAKHRY 727
Query: 994 DVNYYLSQQIHPVVTRLL 1011
D YY+ Q+ P V R+L
Sbjct: 728 DAEYYIENQVLPAVERIL 745
>gi|171185774|ref|YP_001794693.1| DNA polymerase II [Pyrobaculum neutrophilum V24Sta]
gi|170934986|gb|ACB40247.1| DNA polymerase Pol2 [Pyrobaculum neutrophilum V24Sta]
Length = 784
Score = 143 bits (361), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 232/479 (48%), Gaps = 76/479 (15%)
Query: 560 IRITNVCGNVLSRTLMGGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGK 619
I++++V G L + R E++LL + V P N++E
Sbjct: 354 IQLSSVSGLPLDQVAAASVGNRVEWMLLRYAYRLGEVAP------NREE----------- 396
Query: 620 GRKKAAYSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQ--DSDIT 677
R+ Y G +VLEPK G Y+ ++L DF+S+YP+I+ +YN+ P L+ + D
Sbjct: 397 -REYEPYKGAIVLEPKPGMYEDVLVL-DFSSMYPNIMMKYNLS----PDTYLEPGEPDPP 450
Query: 678 TLCEYLPE-----HQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALK 732
PE + G +P +K LVE R+ V+ K+ S D RQ+ALK
Sbjct: 451 EGVNAAPEVGHRFRRSPLGFVPQVLKSLVELRKAVREEAKRYPPDSPEFRILDERQRALK 510
Query: 733 LTANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC 792
+ AN+MYG LG+ +R++ + +A VTA R IL + L V+YGDTDSL +
Sbjct: 511 VMANAMYGYLGWVGARWYKREVAESVTAFARAILKDVIEQARRLGIVVVYGDTDSLFVKK 570
Query: 793 NVNDYDSVFKIGNQIKSECNKLYKQLELDIDGVYKYMLLLK-KKKYAALSISKLSNGKMI 851
+VN V K+ ++ + +E+ +D Y +L + KK+YA L L +G++
Sbjct: 571 HVN----VDKLIQYVEEKYG-----IEIKVDKDYAKVLFTEAKKRYAGL----LRDGRI- 616
Query: 852 CSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQSYTDY--SLDDRLQNIHEHMKKIRTD 909
+I G +VVR DWS+LA E V+ IL+ + + + ++ I E +++ + +
Sbjct: 617 ---DIVGFEVVRGDWSELAKEVQLKVVEIILNSRDVAEARRRVTQYVREIIERLREYKFN 673
Query: 910 LDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQGDTISYIICED 969
+D+ L I K L K EY + PHV AL L + K+ +G+ + Y++ +
Sbjct: 674 VDD-------LIIWKTLDKELGEY--KAYPPHVHAALILKR-HGYKVGKGNMVGYVVVKG 723
Query: 970 GTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRIAECLGL 1028
G + Y L ++ K KIDV YY+ +QI P A+RIAE +G+
Sbjct: 724 GGKISEKALPYI---LLDDVK-KIDVEYYIERQIIPA------------ALRIAEVIGV 766
>gi|296420586|ref|XP_002839850.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636056|emb|CAZ84041.1| unnamed protein product [Tuber melanosporum]
Length = 1067
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 211/412 (51%), Gaps = 51/412 (12%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVR------MLQ---DSDI 676
Y G V+EP++G+YD I +DF SLYPSI+Q +N+C+TT+ + LQ D +I
Sbjct: 553 YEGATVIEPERGYYDVPIATLDFASLYPSIMQAHNLCYTTLVKKETCDRLGLQKDIDYEI 612
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTAN 736
T + + G++P ++ L+ +R++ KA +K+ + + + RQ ALK++AN
Sbjct: 613 TPNGDRFVKAHRRKGMVPLILEALLGARKKAKADLKKATDPFEKAV-LNGRQLALKISAN 671
Query: 737 SMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDTDS 787
S+YG G + P+A+ VT GR++++ TK VE + +VIYGDTDS
Sbjct: 672 SVYGITGATVGKLPCLPIASSVTGYGRQMIMRTKEEVEKRYTIANGYTHDAKVIYGDTDS 731
Query: 788 LMISCNVNDYDSVFKIGNQIKSECN-KLYKQLELDIDGVYKYMLLLKKKKYAALSISKLS 846
+M+ D + ++G + + K ++L+ + VY LL+ KK+YA L +
Sbjct: 732 VMVKFGPKDLPAAMELGKEAAEFVSQKFVTPIKLEFEKVYFPYLLINKKRYAGLY---WT 788
Query: 847 NGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQ-ILDEQSYTDYSLDDRLQNIHEHMKK 905
N + + KG++ VRRD +L +I Q + Q+Y + D LQN
Sbjct: 789 NTEKHDKMDSKGIETVRRDNCRL------LLIDQDVEGAQTYVKDLISDLLQN------- 835
Query: 906 IRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ-GDTISY 964
R D+ L ITK L+K +YT ++A HV++A R+ ++ GD ++Y
Sbjct: 836 -RIDMSQ-------LVITKALSK--NDYTAKQA--HVELAERMRKRDAGSAPTLGDRVAY 883
Query: 965 IICEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEG 1016
+I + +++ + + NS + ID YYL Q+ ++R+ EPI G
Sbjct: 884 VIVKGAGGAKNYEKSEDPIFVLENS-VPIDTKYYLENQLSKPLSRIFEPIIG 934
>gi|307727351|ref|YP_003910564.1| DNA polymerase B region [Burkholderia sp. CCGE1003]
gi|307587876|gb|ADN61273.1| DNA polymerase B region [Burkholderia sp. CCGE1003]
Length = 791
Score = 143 bits (360), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 211/476 (44%), Gaps = 94/476 (19%)
Query: 576 GGRSERNEFLLLHAFHEKSYVLPDKQYGKNKKEGEETGEANKGKGRKKAAYSGGLVLEPK 635
GG L + H + YV P+ G+ G AA GG V++ +
Sbjct: 373 GGSVAAFTHLYMPRMHRQGYVAPNL--------GDVAG----------AASPGGFVMDSR 414
Query: 636 KGFYDKFIILMDFNSLYPSIIQEYNICFTTIPVRMLQDSDITTLCEYL-PEHQVDTGILP 694
G YD ++L D+ SLYPSII+ + I + ML +D ++ +L LP
Sbjct: 415 PGLYDSVLVL-DYKSLYPSIIRTFLIDPVGLVEGMLNPADDQSVAGFLGARFSRKHHCLP 473
Query: 695 SEIKKLVESRRQVKALMKQPNLSSDLLMQYDIRQKALKLTANSMYGCLGFPNSRFFAQPL 754
S + ++ + R K +P LS +ALK+ N+ YG LG RFF L
Sbjct: 474 SIVGQVWQGRETAKREHNKP-LS-----------QALKIIMNAFYGVLGSTGCRFFDPRL 521
Query: 755 AALVTAKGREILLNTKSLVENLNYEVIYGDTDSLMISC-NVNDYDSVFKIGNQIKSECNK 813
A+ +T +G EI+ T+ L++ YEVIYGDTDS + + +D D +IG + N
Sbjct: 522 ASSITMRGHEIMHRTRELIQAEGYEVIYGDTDSTFVWLRHAHDEDEAGRIGRALVDHINA 581
Query: 814 LYKQ-----------LELDIDGVYKYMLLL--------KKKKYAALSISKLSNGKMICSQ 854
++Q LEL + Y+ + KK+YA LS+S +G +Q
Sbjct: 582 WWRQDLQRRFGLESALELQFERHYRRFFMPTIRGAEEGSKKRYAGLSVS--PDG----AQ 635
Query: 855 EI--KGVDVVRRDWSQLASEAGKFVISQILDEQSYTDYSLDDRLQNIHEHMK-KIRTDLD 911
EI KG++ VR DW+ LA + + +I +Q Y DY + ++++ + LD
Sbjct: 636 EIVYKGLETVRTDWTPLAQRFQQELYRRIFTQQPYQDY--------VRDYVRDTLAGKLD 687
Query: 912 NGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSK-----KLKQGDTISYII 966
+ V K+L + +Y +R PHV+ A + N + + + G ISY++
Sbjct: 688 DQLV------YRKRLRRPLGDY-ERNVPPHVRAARVADEFNRRQGRPLQYQNGGWISYVM 740
Query: 967 CEDGTSEAATQRAYNIEELKNNSKLKIDVNYYLSQQIHPVVTRLLEPIEGTDAVRI 1022
G T R+ ID +YL++Q+ PV +L P+ D R+
Sbjct: 741 TVAGPEPLETLRS------------AIDYEHYLTRQLQPVADAIL-PLLRDDFTRL 783
>gi|363753924|ref|XP_003647178.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae DBVPG#7215]
gi|356890814|gb|AET40361.1| hypothetical protein Ecym_5625 [Eremothecium cymbalariae DBVPG#7215]
Length = 1092
Score = 142 bits (359), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 198/410 (48%), Gaps = 64/410 (15%)
Query: 626 YSGGLVLEPKKGFYDKFIILMDFNSLYPSIIQEYNICFTT---------IPVRMLQDSDI 676
Y G V+EP +G+YD I +DFNSLYPSI+ +N+C+TT + ++ +D I
Sbjct: 582 YQGATVIEPIRGYYDVPIATLDFNSLYPSIMMAHNLCYTTLCNKSTVARLNLKENEDYII 641
Query: 677 TTLCEYLPEHQVDTGILPSEIKKLVESRRQVKALMKQPN--LSSDLLMQYDIRQKALKLT 734
T +Y + GILP+ + +L+ +R++ K +K D+L + RQ ALK++
Sbjct: 642 TPNGDYFVTEKRRRGILPTILHELISARKRAKTDLKNETDPFRKDVL---NGRQLALKIS 698
Query: 735 ANSMYGCLGFPNSRFFAQPLAALVTAKGREILLNTKSLVE---------NLNYEVIYGDT 785
ANS+YG G + +++ VT+ GR ++ TK VE + + VIYGDT
Sbjct: 699 ANSVYGFTGATVGKLPCLAISSSVTSFGRTMIEATKRAVEEKYTVKNGFSHDAVVIYGDT 758
Query: 786 DSLMISCNVNDYDSVFKIGNQIKSECNKLYKQ-LELDIDGVYKYMLLLKKKKYAALSISK 844
DS+M+ D +G + + + L+K + L+ + VY LL+ KK+YA L ++
Sbjct: 759 DSVMVKFGKTDLQETMNLGAEAAAYVSSLFKHPINLEFEKVYFPYLLINKKRYAGLYWTR 818
Query: 845 LSNGKMICSQEIKGVDVVRRDWSQLASEAGKFVISQILDEQS------YTDYSLDDRLQN 898
+ + KG+ VRRD L S V+ IL +++ + ++DD LQN
Sbjct: 819 PEKHDKL---DQKGLASVRRDSCPLVSLVMNKVLRMILIDRNVPGALDFVRSTIDDVLQN 875
Query: 899 IHEHMKKIRTDLDNGFVPLTLLEITKQLTKAPEEYTDRKALPHVQVALRLNNTNSKKLKQ 958
R D+ + TL AP YT+ + PH +A R+ +
Sbjct: 876 --------RADISKLIISKTL---------AP-SYTNSQ--PHAVLAERMKKRDGVGPNV 915
Query: 959 GDTISYIICEDGTSEAATQRA----YNIEELKNNSKLKIDVNYYLSQQIH 1004
GD + Y+I G ++ RA Y +E+ ++ID YYL+ Q+
Sbjct: 916 GDRVDYVIV--GGNDKLYNRAEDPLYVLEQ-----NIQIDSKYYLTTQLQ 958
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,909,321,735
Number of Sequences: 23463169
Number of extensions: 868890146
Number of successful extensions: 2278208
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3654
Number of HSP's successfully gapped in prelim test: 7064
Number of HSP's that attempted gapping in prelim test: 2221303
Number of HSP's gapped (non-prelim): 36002
length of query: 1274
length of database: 8,064,228,071
effective HSP length: 155
effective length of query: 1119
effective length of database: 8,722,404,172
effective search space: 9760370268468
effective search space used: 9760370268468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 83 (36.6 bits)