RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13614
         (118 letters)



>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
          Length = 231

 Score = 26.3 bits (57), Expect = 0.98
 Identities = 6/32 (18%), Positives = 9/32 (28%)

Query: 55  SIGGRLVVANIAWPNEWVILIGSFLSTIGAGL 86
           S    +     A    W   +   +  I  GL
Sbjct: 190 STAVAIFQGGWALEQLWFFWVVPIVGGIIGGL 221


>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
           SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
          Length = 335

 Score = 26.2 bits (56), Expect = 0.99
 Identities = 8/24 (33%), Positives = 10/24 (41%)

Query: 82  IGAGLQSLTGAPRLLQQGPKSDII 105
           IGAG   L  A  LL +     + 
Sbjct: 10  IGAGPSGLVTAKALLAEKAFDQVT 33


>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
           mays) [TaxId: 4577]}
          Length = 347

 Score = 24.9 bits (52), Expect = 3.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query: 82  IGAGLQSLTGAPRLLQQGPKS 102
           +GAG+  ++ A RL + G   
Sbjct: 6   VGAGMSGISAAKRLSEAGITD 26


>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
           {Thermobifida fusca [TaxId: 2021]}
          Length = 298

 Score = 24.8 bits (53), Expect = 3.4
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 82  IGAGLQSLTGAPRLLQQGPKSDIIRTEDN 110
           +GAG   L    RL + G    +I T  +
Sbjct: 13  VGAGFSGLYALYRLRELGRSVHVIETAGD 41


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.138    0.409 

Gapped
Lambda     K      H
   0.267   0.0418    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 402,004
Number of extensions: 15646
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 9
Length of query: 118
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 44
Effective length of database: 1,391,576
Effective search space: 61229344
Effective search space used: 61229344
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)