Query psy13615
Match_columns 263
No_of_seqs 211 out of 2534
Neff 6.8
Searched_HMMs 13730
Date Fri Aug 16 15:43:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13615.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/13615hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jkxa_ c.65.1.1 (A:) Glycinam 99.9 2.3E-27 1.7E-31 203.9 10.2 174 11-226 1-189 (209)
2 d1meoa_ c.65.1.1 (A:) Glycinam 99.9 1.2E-26 8.6E-31 198.8 10.2 172 12-225 2-188 (205)
3 d1gsoa3 d.142.1.2 (A:104-327) 99.9 7.6E-23 5.5E-27 177.1 8.8 111 141-263 80-191 (224)
4 d1clia1 d.79.4.1 (A:5-170) Ami 99.6 8.5E-17 6.2E-21 132.5 0.1 107 13-131 56-166 (166)
5 d2bw0a2 c.65.1.1 (A:1-203) 10- 99.5 2E-15 1.5E-19 128.0 6.1 167 11-226 1-188 (203)
6 d2blna2 c.65.1.1 (A:1-203) Pol 99.5 1E-14 7.3E-19 123.6 6.2 160 11-224 1-183 (203)
7 d1fmta2 c.65.1.1 (A:1-206) Met 99.5 4.5E-14 3.3E-18 119.3 7.8 162 9-224 2-189 (206)
8 d1vkza3 d.142.1.2 (A:94-313) G 99.0 6.7E-10 4.9E-14 93.0 9.7 99 154-263 90-188 (220)
9 d1zgha2 c.65.1.1 (A:1-164) Met 98.2 8.5E-08 6.2E-12 77.7 0.7 98 110-226 46-150 (164)
10 d1clia2 d.139.1.1 (A:171-345) 97.0 2.7E-05 2E-09 63.3 -1.5 29 136-164 4-32 (175)
11 d1a9xa5 d.142.1.2 (A:128-402) 96.5 0.0057 4.2E-07 51.9 9.5 90 156-261 89-178 (275)
12 d2r7ka2 d.142.1.9 (A:124-361) 95.9 0.0076 5.6E-07 49.5 7.0 71 183-261 122-193 (238)
13 d1nvmb1 c.2.1.3 (B:1-131,B:287 95.9 0.0061 4.5E-07 47.8 6.0 55 7-67 1-57 (157)
14 d2j9ga3 d.142.1.2 (A:115-330) 94.4 0.031 2.2E-06 45.3 6.2 63 185-261 118-180 (216)
15 d2z1ea1 d.79.4.1 (A:43-155) Hy 93.4 0.011 7.8E-07 43.8 1.1 57 64-126 50-111 (113)
16 d1a9xa6 d.142.1.2 (A:677-935) 91.1 0.33 2.4E-05 40.4 8.1 87 155-261 85-171 (259)
17 d1ulza3 d.142.1.2 (A:115-328) 91.1 0.16 1.2E-05 40.4 5.8 58 192-262 123-180 (214)
18 d2r85a2 d.142.1.9 (A:100-334) 90.1 0.36 2.6E-05 38.4 7.2 58 196-261 133-190 (235)
19 d1r0ka2 c.2.1.3 (A:3-126,A:265 89.3 0.41 3E-05 36.7 6.5 95 9-118 1-98 (150)
20 d1q0qa2 c.2.1.3 (A:1-125,A:275 88.2 0.76 5.5E-05 35.2 7.5 96 10-118 1-100 (151)
21 d3etja3 d.142.1.2 (A:79-276) N 87.9 0.48 3.5E-05 36.1 6.3 48 201-262 120-167 (198)
22 d1w96a3 d.142.1.2 (A:184-450) 82.0 1.5 0.00011 35.7 7.0 57 193-261 146-202 (267)
23 d1e4ea2 d.142.1.1 (A:132-342) 76.5 3.5 0.00026 31.4 7.3 49 201-262 133-181 (211)
24 d1kjqa3 d.142.1.2 (A:113-318) 74.3 3.1 0.00023 31.4 6.3 27 227-261 147-173 (206)
25 d1ehia2 d.142.1.1 (A:135-362) 73.7 2.3 0.00017 33.0 5.4 59 190-261 130-188 (228)
26 d1ni5a1 c.26.2.5 (A:0-226) tRN 66.8 5.5 0.0004 31.2 6.4 62 7-70 10-81 (227)
27 d1n1ea2 c.2.1.6 (A:9-197) Glyc 66.6 0.92 6.7E-05 35.5 1.3 25 4-28 1-26 (189)
28 d3c9ua1 d.79.4.1 (A:1-137) Thi 65.4 2.7 0.00019 31.1 3.8 50 56-108 71-125 (137)
29 d2g5ca2 c.2.1.6 (A:30-200) Pre 61.5 8.2 0.00059 28.3 6.1 51 10-68 1-52 (171)
30 d1ltqa1 c.108.1.9 (A:153-301) 61.4 4 0.00029 29.2 4.1 33 39-73 117-149 (149)
31 d2d13a1 c.26.2.1 (A:2-227) Hyp 60.5 16 0.0012 29.0 8.1 70 10-86 3-85 (226)
32 d1ccwa_ c.23.6.1 (A:) Glutamat 59.8 10 0.00076 27.6 6.3 73 8-86 1-78 (137)
33 d1f0ka_ c.87.1.2 (A:) Peptidog 58.5 4.7 0.00034 32.4 4.5 55 11-71 1-58 (351)
34 d1iowa2 d.142.1.1 (A:97-306) D 58.2 7.5 0.00054 29.4 5.5 49 201-262 133-181 (210)
35 d1uc8a2 d.142.1.7 (A:89-280) L 57.4 7 0.00051 28.8 5.1 27 225-262 142-168 (192)
36 d1ez4a1 c.2.1.5 (A:16-162) Lac 49.8 4.3 0.00031 30.2 2.5 22 7-28 2-24 (146)
37 d2zoda1 d.79.4.1 (A:3-154) Sel 48.6 7.8 0.00057 29.0 3.9 44 76-128 105-150 (152)
38 d1tlta1 c.2.1.3 (A:5-127,A:268 45.4 13 0.00097 27.1 4.9 48 10-64 1-50 (164)
39 d1ydwa1 c.2.1.3 (A:6-133,A:305 42.2 11 0.00077 28.2 3.9 48 10-64 1-49 (184)
40 d1f06a1 c.2.1.3 (A:1-118,A:269 39.3 14 0.001 27.4 4.1 38 8-51 1-39 (170)
41 d1zh8a1 c.2.1.3 (A:4-131,A:276 37.9 14 0.001 27.5 4.0 53 8-67 1-56 (181)
42 d1wy5a1 c.26.2.5 (A:1-216) Til 36.5 47 0.0034 25.3 7.2 62 6-70 19-92 (216)
43 d1b74a1 c.78.2.1 (A:1-105) Glu 35.0 32 0.0023 24.0 5.2 18 11-28 1-20 (105)
44 d2f1ka2 c.2.1.6 (A:1-165) Prep 33.5 24 0.0018 25.5 4.6 43 11-63 1-44 (165)
45 d1vm6a3 c.2.1.3 (A:1-96,A:183- 32.3 24 0.0017 25.2 4.3 55 11-66 1-69 (128)
46 d2i6ga1 c.66.1.44 (A:1-198) Pu 31.3 14 0.001 27.7 2.9 54 6-67 27-81 (198)
47 d1h6da1 c.2.1.3 (A:51-212,A:37 31.3 18 0.0013 28.0 3.7 49 10-65 33-83 (221)
48 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 30.9 23 0.0017 23.7 3.7 16 51-66 73-88 (89)
49 d2ahra2 c.2.1.6 (A:1-152) Pyrr 30.6 19 0.0014 26.1 3.5 46 11-65 1-47 (152)
50 d1y0ba1 c.61.1.1 (A:1-191) Xan 29.3 34 0.0025 25.9 5.0 59 9-70 116-177 (191)
51 d2w6ka1 c.151.1.1 (A:1-139) Co 28.6 27 0.002 25.5 4.0 61 10-70 6-73 (139)
52 d1j5pa4 c.2.1.3 (A:-1-108,A:22 28.2 35 0.0025 23.9 4.6 77 10-86 2-98 (132)
53 d1pzga1 c.2.1.5 (A:14-163) Lac 27.1 15 0.0011 27.1 2.3 36 7-48 4-40 (154)
54 d3by5a1 c.151.1.1 (A:8-130) Co 25.2 46 0.0034 23.6 4.7 58 13-70 3-63 (123)
55 d1u6ka1 c.127.1.1 (A:2-283) F4 25.2 25 0.0019 28.4 3.5 63 10-72 29-100 (282)
56 d1xeaa1 c.2.1.3 (A:2-122,A:267 24.4 18 0.0013 26.4 2.2 47 11-65 2-50 (167)
57 d1gega_ c.2.1.2 (A:) meso-2,3- 23.8 77 0.0056 24.5 6.4 68 11-86 1-72 (255)
58 d2bv3a2 c.37.1.8 (A:7-282) Elo 23.0 65 0.0048 25.9 5.9 46 40-86 95-147 (276)
59 d1c4ka1 c.23.1.4 (A:1-107) Orn 21.2 45 0.0033 23.3 3.8 32 41-72 32-65 (107)
60 d2uubl1 b.40.4.5 (L:5-122) Rib 20.7 13 0.00093 26.8 0.6 24 2-25 51-74 (118)
61 d1jf8a_ c.44.1.1 (A:) Arsenate 20.2 51 0.0037 22.8 4.1 56 9-66 1-59 (130)
62 d2hmva1 c.2.1.9 (A:7-140) Ktn 20.1 63 0.0046 22.0 4.6 50 11-70 1-51 (134)
63 d1e3ja2 c.2.1.1 (A:143-312) Ke 20.1 1.4E+02 0.0099 20.9 8.9 52 11-72 28-80 (170)
64 d1ks9a2 c.2.1.6 (A:1-167) Keto 20.0 29 0.0021 24.6 2.7 31 11-48 1-32 (167)
No 1
>d1jkxa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=2.3e-27 Score=203.90 Aligned_cols=174 Identities=24% Similarity=0.295 Sum_probs=143.5
Q ss_pred ccEEEEEcCcchhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeCCCCCCH-HHHHHHHHHhccc
Q psy13615 11 KRVAVLISGTGTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTYKHTLIL-SNSLQVMQKVGAK 89 (263)
Q Consensus 11 ~riavl~SG~Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~~~~~~~-~~~~~i~~~l~~~ 89 (263)
+|||||+||+||||++|+++ .+.+.++++|++|+||++++.++++|++.++|.+......+.+. .+++++++.+ +
T Consensus 1 MkIaVl~SG~GSnL~aLl~a--~~~~~l~~~I~~Visn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~ 76 (209)
T d1jkxa_ 1 MNIVVLISGNGSNLQAIIDA--CKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEI--D 76 (209)
T ss_dssp CEEEEEESSCCHHHHHHHHH--HHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHH--G
T ss_pred CEEEEEEecCcHHHHHHHHH--HHcCCCCCEEEEEEeCCCCcccchhhhccccceeeeeccccccccchHHHHHHHH--H
Confidence 48999999999999999976 45577889999999999999999999999999999887777665 7777777877 6
Q ss_pred cCCCCceeeeccccccCCCCcCCCcEEEeeeeeEE----ee--cCCcCCccccccCCcEEEEecCCCCCccccce-eEEE
Q psy13615 90 YSDIAPFSQDGGETAELPGLYQPGDYDLAGFAVGA----VE--KASLLPKVKDVAAGDVVIALPSSGIHSNGFSL-VLCF 162 (263)
Q Consensus 90 ~~~~~~~~~~gge~~~l~~~~~~d~i~LAG~m~~~----~~--~~~~in~hpsl~~g~~ii~Lp~~G~~~~g~Sl-~~ai 162 (263)
. +++|+++++|||+.+ ++ +..++|+|||+ ||. ++|.++ .|++
T Consensus 77 ~-------------------~~~Dliv~~g~~~il~~~~l~~~~~~~iN~Hpsl--------LP~----~rG~~p~~~~i 125 (209)
T d1jkxa_ 77 M-------------------YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSL--------LPK----YPGLHTHRQAL 125 (209)
T ss_dssp G-------------------GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC--------TTS----CCSSCHHHHHH
T ss_pred h-------------------cCCCEEEEeeeeEecChhhhcccccCEEEeCCch--------hcc----cCCcCchhHHH
Confidence 7 899999999999843 22 45689999999 998 333334 4455
Q ss_pred ecCcceeecCCccccccccCCCCCCCCCCeeEECcccCCCHHHHHHHHHH-------HHHHHHHHHHhcCC
Q psy13615 163 TDGKTVKVMPPSQDHKRKYNNDKGPNTGGMGAYCPCDILTEAQKKEIHDT-------ILMRVIKKMIAEGT 226 (263)
Q Consensus 163 ~dg~~~~~~~~t~dhkr~~~~d~G~dTGgmga~~pv~i~~~~~~~~i~~~-------il~~~i~~~~~eg~ 226 (263)
.+| .+.+|+| .| ++|++.|+|+++.|..+++.++|+.+++.++ ++.++++.+.+..+
T Consensus 126 ~~g--~~~~G~t-~h----~~~~~~D~G~Ii~q~~~~i~~~d~~~~l~~k~~~~e~~l~~~~i~~i~~~~i 189 (209)
T d1jkxa_ 126 ENG--DEEHGTS-VH----FVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRL 189 (209)
T ss_dssp HTT--CSEEEEE-EE----ECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HCC--Ceeecce-EE----EecCCCCcccEeeEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCe
Confidence 655 5568999 47 9999999999999999999999888887665 58889999876443
No 2
>d1meoa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=1.2e-26 Score=198.84 Aligned_cols=172 Identities=27% Similarity=0.321 Sum_probs=138.7
Q ss_pred cEEEEEcCcchhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeCCCCCCH-HHHHHHHHHhcccc
Q psy13615 12 RVAVLISGTGTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTYKHTLIL-SNSLQVMQKVGAKY 90 (263)
Q Consensus 12 riavl~SG~Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~~~~~~~-~~~~~i~~~l~~~~ 90 (263)
|||||+||+||||++|+++ ++.+.++++|++|+||++++.++++|+..++|........+..+ ++..++.+.+ +.
T Consensus 2 ri~vl~SG~Gsnl~aLl~~--~~~~~l~~~I~~Vitn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--~~ 77 (205)
T d1meoa_ 2 RVAVLISGTGSNLQALIDS--TREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVL--EE 77 (205)
T ss_dssp EEEEEESSSCTTHHHHHHH--HHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH--HH
T ss_pred EEEEEEeCCcHhHHHHHHH--HhcCCCCCEEEEEEECCccccccccccccccccccccccccchhhhHHHHHHHHH--hh
Confidence 8999999999999999976 45677889999999999999999999999999998877665554 7777777777 67
Q ss_pred CCCCceeeeccccccCCCCcCCCcEEEeeeeeEE----ee--cCCcCCccccccCCcEEEEecC-CCCCccccceeEEEe
Q psy13615 91 SDIAPFSQDGGETAELPGLYQPGDYDLAGFAVGA----VE--KASLLPKVKDVAAGDVVIALPS-SGIHSNGFSLVLCFT 163 (263)
Q Consensus 91 ~~~~~~~~~gge~~~l~~~~~~d~i~LAG~m~~~----~~--~~~~in~hpsl~~g~~ii~Lp~-~G~~~~g~Sl~~ai~ 163 (263)
+++|++++||||+.+ ++ +..++|.|||+ ||. .|.+.. .|++.
T Consensus 78 -------------------~~~Dliv~~g~~~il~~~~l~~~~~~~iN~Hpsl--------LP~~rG~~~~----~~ai~ 126 (205)
T d1meoa_ 78 -------------------FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSL--------LPSFKGSNAH----EQALE 126 (205)
T ss_dssp -------------------TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESSS--------TTSSCSSCHH----HHHHH
T ss_pred -------------------cccceeeeechhcccCHHHHHhccCCeeecCccc--------cchhhhhhhH----HHHHh
Confidence 899999999999843 22 34689999999 998 554433 34556
Q ss_pred cCcceeecCCccccccccCCCCCCCCCCeeEECcccCCCHHHHHHHHHH-------HHHHHHHHHHhcC
Q psy13615 164 DGKTVKVMPPSQDHKRKYNNDKGPNTGGMGAYCPCDILTEAQKKEIHDT-------ILMRVIKKMIAEG 225 (263)
Q Consensus 164 dg~~~~~~~~t~dhkr~~~~d~G~dTGgmga~~pv~i~~~~~~~~i~~~-------il~~~i~~~~~eg 225 (263)
+| ...+|+| .| .+|++.|+|++..|..+++.++|+.+++.++ +++++++.+.+..
T Consensus 127 ~g--~~~~G~t-ih----~v~~~iD~G~Ii~q~~~~I~~~dt~~~L~~k~~~~~~~l~~~~l~~i~~g~ 188 (205)
T d1meoa_ 127 TG--VTVTGCT-VH----FVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGT 188 (205)
T ss_dssp HT--CSEEEEE-EE----ECCC---CCCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cC--Cccccee-EE----eecCCCCCCcEeEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 55 4558999 47 9999999999999999999999998887765 5788888886543
No 3
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]}
Probab=99.87 E-value=7.6e-23 Score=177.06 Aligned_cols=111 Identities=35% Similarity=0.527 Sum_probs=98.8
Q ss_pred cEEEEecCCCCCccccceeEEEecCcceeecCCccccccccCCCCCCCCCCeeEECcccCCCHHHHHHHHHHHHHHHHHH
Q psy13615 141 DVVIALPSSGIHSNGFSLVLCFTDGKTVKVMPPSQDHKRKYNNDKGPNTGGMGAYCPCDILTEAQKKEIHDTILMRVIKK 220 (263)
Q Consensus 141 ~~ii~Lp~~G~~~~g~Sl~~ai~dg~~~~~~~~t~dhkr~~~~d~G~dTGgmga~~pv~i~~~~~~~~i~~~il~~~i~~ 220 (263)
.++|+-...| .++|+. +++||..+.++++++||||+++.|.||+|||||+++|.|..++++.+++.++++.+++++
T Consensus 80 ~vliEefl~G---~E~s~~-~i~dg~~~~~~~~~~d~kr~~d~~~gp~tggmg~~~P~p~~~~~l~~~~~~~i~~~~~~~ 155 (224)
T d1gsoa3 80 RIVIEEFLDG---EEASFI-VMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVVTDDVHQRTMERIIWPTVKG 155 (224)
T ss_dssp CEEEEECCCE---EEEEEE-EEEESSCEEEEEEEEEEEEEETTTEEEEEEEEEEEESCTTCCHHHHHHHHHHTHHHHHHH
T ss_pred eEEeeccccc---ccceeE-EEeccCceEeeecccccccccccccccccccccccCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 3555555555 457775 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEEeeccccccCCceeeecCc-ceeeeeCCCCCCC
Q psy13615 221 MIAEGTPFVGEKKRGFTEGTVTAKVFSSRN-RREKEDNPEEGDP 263 (263)
Q Consensus 221 ~~~eg~~~~G~L~~gl~~~~~~~~~~~~~~-~~~~e~n~~~gdp 263 (263)
++++|++|+|++|+++| +|..| +.|+|+|+|||||
T Consensus 156 ~~~~g~~~~G~l~~~~m--------it~~G~p~vlE~N~R~Gdp 191 (224)
T d1gsoa3 156 MAAEGNTYTGFLYAGLM--------IDKQGNPKVIEFNCRFGDL 191 (224)
T ss_dssp HHHTTCCCEEEEEEEEE--------EETTCCEEEEEEESSCCTT
T ss_pred HHhcCceeeeeecccee--------eeeCCCEEEEEEecCCCCC
Confidence 99999999999999999 45554 6778999999998
No 4
>d1clia1 d.79.4.1 (A:5-170) Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.57 E-value=8.5e-17 Score=132.47 Aligned_cols=107 Identities=35% Similarity=0.554 Sum_probs=92.8
Q ss_pred EEEEEcCcchhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeCCCCCCH--HHHHHHHHHh--cc
Q psy13615 13 VAVLISGTGTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTYKHTLIL--SNSLQVMQKV--GA 88 (263)
Q Consensus 13 iavl~SG~Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~~~~~~~--~~~~~i~~~l--~~ 88 (263)
++.-..|-||+++-..+ ..++..+++|+++++.|+--|.|.+ |.+++||.+.++. +..+++++++ +|
T Consensus 56 Lv~~tDGVGTK~~iA~~--~~~~~~iG~DlVam~vNDil~~GA~-------Pl~flDY~a~~~~~~~~~~~iv~Gi~~ac 126 (166)
T d1clia1 56 LVSGTDGVGTKLRLAMD--LKRHDTIGIDLVAMCVNDLVVQGAE-------PLFFLDYYATGKLDVDTASAVISGIAEGC 126 (166)
T ss_dssp EEEEEEECCTHHHHHHH--TTCCSSHHHHHHHHHHHHHGGGTCE-------EEEEEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred EEEeecccchhhHHHHH--hhhhcCcchhhHhhccchhhhccHH-------HHHHHHhhhhcccchHHHHHHHHHHHHHH
Confidence 33344455999996663 3567788999999999999999998 9999999988664 8889999999 88
Q ss_pred ccCCCCceeeeccccccCCCCcCCCcEEEeeeeeEEeecCCcC
Q psy13615 89 KYSDIAPFSQDGGETAELPGLYQPGDYDLAGFAVGAVEKASLL 131 (263)
Q Consensus 89 ~~~~~~~~~~~gge~~~l~~~~~~d~i~LAG~m~~~~~~~~~i 131 (263)
++ ++|+|+|||||+||++|+.+.++||||+.|+++++++|
T Consensus 127 ~~---~~~~LiGGETAempgvy~~~~~DLaG~~vGivek~~ii 166 (166)
T d1clia1 127 LQ---SGCSLVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEII 166 (166)
T ss_dssp HH---HTCEEEEEEEEECTTTSCTTCEEEEEEEEEEEEGGGCC
T ss_pred HH---hCCcccccccccccCcCCCCCEEEEeEEEEEEeccccC
Confidence 98 99999999999999999999999999999999987764
No 5
>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=2e-15 Score=127.97 Aligned_cols=167 Identities=16% Similarity=0.093 Sum_probs=116.0
Q ss_pred ccEEEEEcCc-c-hhHHHHHHHhccccCCCCceEEEEEecCC----CChhhHHHHHcCCCEEEeeCCCCCCHHHHHHHHH
Q psy13615 11 KRVAVLISGT-G-TNLKSLLEATSNRSDIMRAEIVLVVSNKH----NVEGLNIARNAGIPTKVSTYKHTLILSNSLQVMQ 84 (263)
Q Consensus 11 ~riavl~SG~-G-snl~al~~~~~~~~~~l~~~iv~Visn~~----~a~gl~~A~~~gIP~~~v~~~~~~~~~~~~~i~~ 84 (263)
+||++|+|+. | ..|+.|+ +. +.+|++|+|..+ ..+..+.|++++||++........+ ....++++
T Consensus 1 MkI~~~G~~~~~~~~l~~L~-----~~---~~~i~~V~t~p~~~~~~~~v~~~a~~~~ipv~~~~~~~~~~-~~~~~~~~ 71 (203)
T d2bw0a2 1 MKIAVIGQSLFGQEVYCHLR-----KE---GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKG-QALPDVVA 71 (203)
T ss_dssp CEEEEECCHHHHHHHHHHHH-----HT---TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETT-EECHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHHH-----HC---CCcEEEEEcCCCcCcCCChhhhhHHhcCCcccccccccccc-cccHHHHH
Confidence 4899996654 2 2233333 21 369999998421 2356789999999988775433222 23334556
Q ss_pred HhccccCCCCceeeeccccccCCCCcCCCcEEEeeeeeEE----ee--cCCcCCccccccCCcEEEEecCCCCCccccce
Q psy13615 85 KVGAKYSDIAPFSQDGGETAELPGLYQPGDYDLAGFAVGA----VE--KASLLPKVKDVAAGDVVIALPSSGIHSNGFSL 158 (263)
Q Consensus 85 ~l~~~~~~~~~~~~~gge~~~l~~~~~~d~i~LAG~m~~~----~~--~~~~in~hpsl~~g~~ii~Lp~~G~~~~g~Sl 158 (263)
.+ ++ +++|+++++||++.+ ++ +..++|+|||+ ||. ++|.++
T Consensus 72 ~l--~~-------------------~~~Dliv~~~~~~ii~~~~l~~~~~g~iN~H~sl--------LP~----yrG~~p 118 (203)
T d2bw0a2 72 KY--QA-------------------LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL--------LPR----HRGASA 118 (203)
T ss_dssp HH--HT-------------------TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC--------TTT----TBSSCH
T ss_pred HH--HH-------------------hCCCceEEeecchhhhhhhhhhhhhHhhhhhhcc--------ccc----ccccce
Confidence 66 56 789999999999732 22 34589999999 998 344444
Q ss_pred -eEEEecCcceeecCCccccccccCCCCCCCCCCeeEECcccCCCHHHHHHHHHH--------HHHHHHHHHHhcCC
Q psy13615 159 -VLCFTDGKTVKVMPPSQDHKRKYNNDKGPNTGGMGAYCPCDILTEAQKKEIHDT--------ILMRVIKKMIAEGT 226 (263)
Q Consensus 159 -~~ai~dg~~~~~~~~t~dhkr~~~~d~G~dTGgmga~~pv~i~~~~~~~~i~~~--------il~~~i~~~~~eg~ 226 (263)
.|++.+|. ..+|+| .| ..+++.|+|++..|..+++.++|+.+++.++ .+.++++.+.+...
T Consensus 119 i~wai~~g~--~~~GvT-ih----~~~~~~D~G~Ii~q~~~~i~~~dt~~~l~~k~l~~~~~~~~~~~l~~i~~g~~ 188 (203)
T d2bw0a2 119 INWTLIHGD--KKGGFS-IF----WADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKA 188 (203)
T ss_dssp HHHHHHTTC--SEEEEE-EE----ECCSSSSCSCEEEEEEEECCTTCCHHHHHHHTTTHHHHHHHHHHHHHHHHTCC
T ss_pred eeeeecccc--cccCce-eE----EeccccccchhheeecccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 55777664 458888 46 8999999999999999999888887776544 46777777765433
No 6
>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.49 E-value=1e-14 Score=123.57 Aligned_cols=160 Identities=16% Similarity=0.159 Sum_probs=114.0
Q ss_pred ccEEEEEcCc-chh-HHHHHHHhccccCCCCceEEEEEecCCC-------ChhhHHHHHcCCCEEEeeCCCCCCHHHHHH
Q psy13615 11 KRVAVLISGT-GTN-LKSLLEATSNRSDIMRAEIVLVVSNKHN-------VEGLNIARNAGIPTKVSTYKHTLILSNSLQ 81 (263)
Q Consensus 11 ~riavl~SG~-Gsn-l~al~~~~~~~~~~l~~~iv~Visn~~~-------a~gl~~A~~~gIP~~~v~~~~~~~~~~~~~ 81 (263)
+||++|+++. |.+ |++|+++ +.+|++|+|..+. +...+.|+++|||++..+..+ + ++
T Consensus 1 Mkiv~~~~~~~g~~~l~~L~~~--------g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~--~----~~ 66 (203)
T d2blna2 1 MKTVVFAYHDMGCLGIEALLAA--------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVN--H----PL 66 (203)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT--------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCC--S----HH
T ss_pred CeEEEEecCHHHHHHHHHHHHC--------CCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceeccccc--c----hh
Confidence 4799998766 543 6666521 3699999985322 345789999999987654332 3 22
Q ss_pred HHHHhccccCCCCceeeeccccccCCCCcCCCcEEEeeeeeEE----ee--cCCcCCccccccCCcEEEEecCCCCCccc
Q psy13615 82 VMQKVGAKYSDIAPFSQDGGETAELPGLYQPGDYDLAGFAVGA----VE--KASLLPKVKDVAAGDVVIALPSSGIHSNG 155 (263)
Q Consensus 82 i~~~l~~~~~~~~~~~~~gge~~~l~~~~~~d~i~LAG~m~~~----~~--~~~~in~hpsl~~g~~ii~Lp~~G~~~~g 155 (263)
+++.+ +. .++|+++++||+..+ ++ +..++|.||++ ||. ++|
T Consensus 67 ~~~~i--~~-------------------~~~Dlii~~g~~~ii~~~il~~~~~~~iN~H~sl--------LP~----yrG 113 (203)
T d2blna2 67 WVERI--AQ-------------------LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL--------LPK----YRG 113 (203)
T ss_dssp HHHHH--HH-------------------TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSC--------TTT----TEE
T ss_pred hhhhh--hh-------------------hcccceeeeecccchhcccchhhHHHHHHHhhhc--------chh----hhh
Confidence 33445 45 789999999998632 33 34579999999 998 334
Q ss_pred cce-eEEEecCcceeecCCccccccccCCCCCCCCCCeeEECcccCCCHHHHHHHHHH-------HHHHHHHHHHhc
Q psy13615 156 FSL-VLCFTDGKTVKVMPPSQDHKRKYNNDKGPNTGGMGAYCPCDILTEAQKKEIHDT-------ILMRVIKKMIAE 224 (263)
Q Consensus 156 ~Sl-~~ai~dg~~~~~~~~t~dhkr~~~~d~G~dTGgmga~~pv~i~~~~~~~~i~~~-------il~~~i~~~~~e 224 (263)
.++ .|++.+|. ..+|+| .| ..|++.|+|++..|..+++.++|+..++.++ ++.++++.+.+.
T Consensus 114 ~~p~~wai~~g~--~~~G~T-ih----~i~~~iD~G~Il~q~~~~i~~~~t~~~l~~k~~~~~~~l~~~~l~~i~~g 183 (203)
T d2blna2 114 RAPLNWVLVNGE--TETGVT-LH----RMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHG 183 (203)
T ss_dssp SCHHHHHHHTTC--SEEEEE-EE----ECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhhhhccc--ccccce-eE----EeeccCCCccceeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333 56777765 447888 46 8999999999999999999888888877655 467777777653
No 7
>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}
Probab=99.46 E-value=4.5e-14 Score=119.33 Aligned_cols=162 Identities=17% Similarity=0.175 Sum_probs=114.0
Q ss_pred CCccEEEEEcCc--chhHHHHHHHhccccCCCCceEEEEEecCC----------CChhhHHHHHcCCCEEEeeCCCCCCH
Q psy13615 9 QRKRVAVLISGT--GTNLKSLLEATSNRSDIMRAEIVLVVSNKH----------NVEGLNIARNAGIPTKVSTYKHTLIL 76 (263)
Q Consensus 9 ~~~riavl~SG~--Gsnl~al~~~~~~~~~~l~~~iv~Visn~~----------~a~gl~~A~~~gIP~~~v~~~~~~~~ 76 (263)
.++||+||+|+. ...|++|++. +.++++|+|..+ .....+.+.++++|........ +
T Consensus 2 ~~mKI~f~G~~~~~~~~L~~L~~~--------~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 70 (206)
T d1fmta2 2 ESLRIIFAGTPDFAARHLDALLSS--------GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLR--P- 70 (206)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT--------TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSC--S-
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC--------CCCEEEEEeCCCcccccCccccccchhhhhhccCcccccccccc--c-
Confidence 578999997764 2345555521 358999997521 1244678999999987765433 2
Q ss_pred HHHHHHHHHhccccCCCCceeeeccccccCCCCcCCCcEEEeeeeeEE----ee--cCCcCCccccccCCcEEEEecC-C
Q psy13615 77 SNSLQVMQKVGAKYSDIAPFSQDGGETAELPGLYQPGDYDLAGFAVGA----VE--KASLLPKVKDVAAGDVVIALPS-S 149 (263)
Q Consensus 77 ~~~~~i~~~l~~~~~~~~~~~~~gge~~~l~~~~~~d~i~LAG~m~~~----~~--~~~~in~hpsl~~g~~ii~Lp~-~ 149 (263)
+.. .+.+ +. +++|+++++||++.+ ++ +..++|+|||+ ||. .
T Consensus 71 ~~~---~~~~--~~-------------------~~~d~~v~~~~~~ii~~~il~~~k~g~iN~Hps~--------LP~yR 118 (206)
T d1fmta2 71 QEN---QQLV--AE-------------------LQADVMVVVAYGLILPKAVLEMPRLGCINVHGSL--------LPRWR 118 (206)
T ss_dssp HHH---HHHH--HH-------------------TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS--------TTTTB
T ss_pred hhh---HHHH--hh-------------------hcceEEEeeccccccchhhHhcCCCCeeecCchh--------hHhhh
Confidence 222 2334 45 789999999999843 22 34579999999 998 4
Q ss_pred CCCccccceeEEEecCcceeecCCccccccccCCCCCCCCCCeeEECcccCCCHHHHHHHHHH-------HHHHHHHHHH
Q psy13615 150 GIHSNGFSLVLCFTDGKTVKVMPPSQDHKRKYNNDKGPNTGGMGAYCPCDILTEAQKKEIHDT-------ILMRVIKKMI 222 (263)
Q Consensus 150 G~~~~g~Sl~~ai~dg~~~~~~~~t~dhkr~~~~d~G~dTGgmga~~pv~i~~~~~~~~i~~~-------il~~~i~~~~ 222 (263)
|.+.. .|++.+|. ..+|+| .| +.|+|.|||+++.|..+++..+|+..++.++ ++.++++.+.
T Consensus 119 G~~pi----~wai~nge--~~~GvT-~h----~i~~~iD~G~Ii~q~~~~i~~~dt~~~l~~k~~~~~~~l~~~~i~~i~ 187 (206)
T d1fmta2 119 GAAPI----QRSLWAGD--AETGVT-IM----QMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLA 187 (206)
T ss_dssp SSCHH----HHHHHHTC--SEEEEE-EE----ECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhh----hhHHHcCC--ceecee-EE----EeccccChHHhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44432 55777664 447888 47 9999999999999999999999888887766 3566667665
Q ss_pred hc
Q psy13615 223 AE 224 (263)
Q Consensus 223 ~e 224 (263)
+.
T Consensus 188 ~~ 189 (206)
T d1fmta2 188 DG 189 (206)
T ss_dssp HT
T ss_pred cC
Confidence 43
No 8
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]}
Probab=98.99 E-value=6.7e-10 Score=93.02 Aligned_cols=99 Identities=27% Similarity=0.453 Sum_probs=81.9
Q ss_pred cccceeEEEecCcceeecCCccccccccCCCCCCCCCCeeEECcccCCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Q psy13615 154 NGFSLVLCFTDGKTVKVMPPSQDHKRKYNNDKGPNTGGMGAYCPCDILTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKK 233 (263)
Q Consensus 154 ~g~Sl~~ai~dg~~~~~~~~t~dhkr~~~~d~G~dTGgmga~~pv~i~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~ 233 (263)
.++++. .+++|..+.+++++++|++.+..+.+.++++++.+.+.+. +..+ ....++++..+.+++...+..++|.++
T Consensus 90 ~e~~v~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~a~~~~~~~~~G~~~ 166 (220)
T d1vkza3 90 NELSAM-AVVNGRNFVILPFVRDYKRLMDGDRGPNTGGMGSWGPVEI-PSDT-IKKIEELFDKTLWGVEKEGYAYRGFLY 166 (220)
T ss_dssp EEEEEE-EEEETTEEEECCCCEECCEEETTTEEEECSCSEEEECCCC-CHHH-HHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ccceeE-EEEeCCEEEEcccccccccccccccccccccccccccCCc-cchh-hHHHHHHHHHHHHHHhhhhhhhhccce
Confidence 346653 7788888899999999999999999999999999988775 3333 334468899999999999999999999
Q ss_pred eccccccCCceeeecCcceeeeeCCCCCCC
Q psy13615 234 RGFTEGTVTAKVFSSRNRREKEDNPEEGDP 263 (263)
Q Consensus 234 ~gl~~~~~~~~~~~~~~~~~~e~n~~~gdp 263 (263)
+.++. +..++.|+|+|+|+|||
T Consensus 167 ~d~~~--------~~~gp~viEiN~R~G~~ 188 (220)
T d1vkza3 167 LGLML--------HDGDPYILEYNVRLGDP 188 (220)
T ss_dssp EEEEE--------ETTEEEEEEEESSCCTT
T ss_pred eEEEe--------eCCCEEEEEEECCCCCC
Confidence 99994 44455678999999998
No 9
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase {Clostridium thermocellum [TaxId: 1515]}
Probab=98.23 E-value=8.5e-08 Score=77.65 Aligned_cols=98 Identities=17% Similarity=0.077 Sum_probs=69.9
Q ss_pred cCCCcEEEeeeeeE----EeecCCcCCccccccCCcEEEEecCCCCCccccce-eEEEecCcceeecCCccccccccCCC
Q psy13615 110 YQPGDYDLAGFAVG----AVEKASLLPKVKDVAAGDVVIALPSSGIHSNGFSL-VLCFTDGKTVKVMPPSQDHKRKYNND 184 (263)
Q Consensus 110 ~~~d~i~LAG~m~~----~~~~~~~in~hpsl~~g~~ii~Lp~~G~~~~g~Sl-~~ai~dg~~~~~~~~t~dhkr~~~~d 184 (263)
..+|+++++||... ++++..++|.|||+ ||. ++|.++ .|++..|. ...|+| .| ..+
T Consensus 46 ~~~D~ii~~g~~~ii~~~il~~~~~in~H~s~--------LP~----yRG~~p~~wai~~~~--~~~Gvt-ih----~~~ 106 (164)
T d1zgha2 46 INPEYILFPHWSWIIPKEIFENFTCVVFHMTD--------LPF----GRGGSPLQNLIERGI--KKTKIS-AI----KVD 106 (164)
T ss_dssp HCCSEEEESSCCSCCCHHHHTTSCEEEEESSC--------TTT----TEESCHHHHHHHTTC--CEEEEE-EE----ECC
T ss_pred cCCCEEEEeCcccccCHHHHhhCCCccCCCCc--------hhc----ccccccccccccccc--ccccce-eE----Eec
Confidence 67999999999873 23345679999999 998 444444 56777654 457888 46 899
Q ss_pred CCCCCCCeeEECcccCCC--HHHHHHHHHHHHHHHHHHHHhcCC
Q psy13615 185 KGPNTGGMGAYCPCDILT--EAQKKEIHDTILMRVIKKMIAEGT 226 (263)
Q Consensus 185 ~G~dTGgmga~~pv~i~~--~~~~~~i~~~il~~~i~~~~~eg~ 226 (263)
++.|||++..|..+++.. .+...++...++..++..+.+...
T Consensus 107 ~~iD~G~Ii~q~~~~i~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 150 (164)
T d1zgha2 107 GGIDTGDIFFKRDLDLYGTAEEIFMRASKIIFNDMIPELLTKRP 150 (164)
T ss_dssp SSSSCSCEEEEEEEECCSCHHHHHHHHHHHHHHTHHHHHHHHCC
T ss_pred cCCCcCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999988853 233334444456667777765433
No 10
>d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.02 E-value=2.7e-05 Score=63.28 Aligned_cols=29 Identities=59% Similarity=0.794 Sum_probs=26.4
Q ss_pred cccCCcEEEEecCCCCCccccceeEEEec
Q psy13615 136 DVAAGDVVIALPSSGIHSNGFSLVLCFTD 164 (263)
Q Consensus 136 sl~~g~~ii~Lp~~G~~~~g~Sl~~ai~d 164 (263)
++++||+||+|||+|+|+||||+.|++++
T Consensus 4 ~i~~GDviiGl~SsG~HSNGySLvRkil~ 32 (175)
T d1clia2 4 KVSDGDVLIALGSSGPHSNGYSLVRKILE 32 (175)
T ss_dssp TCCTTCEEEEEECSSSTTSSHHHHHHHHH
T ss_pred ccCCCCEEEEecCCCCCcChHHHHHHHHH
Confidence 46899999999999999999999888775
No 11
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=96.49 E-value=0.0057 Score=51.89 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=62.4
Q ss_pred cceeEEEecCcceeecCCccccccccCCCCCCCCCCeeEECcccCCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeec
Q psy13615 156 FSLVLCFTDGKTVKVMPPSQDHKRKYNNDKGPNTGGMGAYCPCDILTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKRG 235 (263)
Q Consensus 156 ~Sl~~ai~dg~~~~~~~~t~dhkr~~~~d~G~dTGgmga~~pv~i~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~g 235 (263)
+++ ..+.++.+.....+..+| +...+.++|.|+..+|.|.++++..+++. .. +.+.+...|.. .|...+.
T Consensus 89 ~~v-~~~~d~~g~~~~~~~~~~----~~~~~~~~~~~~~~aP~~~L~~~~~~~i~-~~---a~~i~~~lg~~-~G~~~~e 158 (275)
T d1a9xa5 89 YEM-EVVRDKNDNCIIVCSIEN----FDAMGIHTGDSITVAPAQTLTDKEYQIMR-NA---SMAVLREIGVE-TGGSNVQ 158 (275)
T ss_dssp EEE-EEEECTTCCEEEEEEEEE----SSCTTSCGGGSCEEESCCSCCHHHHHHHH-HH---HHHHHHHHTCC-SEEEEEE
T ss_pred hee-eeEEecCCCEEEEEeecc----ccccCcccCceeEEcCCCcCCHHHHHHHH-HH---HHHHHHHcCce-ECceEEE
Confidence 444 366676666655566567 77889999999999999999988877665 22 33333333432 4888888
Q ss_pred cccccCCceeeecCcceeeeeCCCCC
Q psy13615 236 FTEGTVTAKVFSSRNRREKEDNPEEG 261 (263)
Q Consensus 236 l~~~~~~~~~~~~~~~~~~e~n~~~g 261 (263)
+.....++++ -++|.|+|..
T Consensus 159 f~~~~~~~~~------~~iE~npR~~ 178 (275)
T d1a9xa5 159 FAVNPKNGRL------IVIEMNPRVS 178 (275)
T ss_dssp EEECTTTCCE------EEEEEESSCC
T ss_pred EEEeCCCCEE------EEEEecCCCC
Confidence 8766666655 4899999964
No 12
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=95.90 E-value=0.0076 Score=49.54 Aligned_cols=71 Identities=7% Similarity=-0.136 Sum_probs=54.1
Q ss_pred CCCCCCCCCeeEECcccCCCHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEeeccccccCCceeeecCcceeeeeCCCCC
Q psy13615 183 NDKGPNTGGMGAYCPCDILTEAQKKEIHDTILMRVIKKMIAE-GTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEG 261 (263)
Q Consensus 183 ~d~G~dTGgmga~~pv~i~~~~~~~~i~~~il~~~i~~~~~e-g~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~g 261 (263)
...+.+.+.+....|-+.++++..+++. ++...+++++... +..|+|...+.++.+..+ .+.|+|+|+|+|
T Consensus 122 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~~~~~i~~~l~~~~~~~~~G~~~ve~~~~~dg-------~~~viEinpR~~ 193 (238)
T d2r7ka2 122 LEMNINPSYVITGNIPVVIRESLLPQVF-EMGDKLVAKAKELVPPGMIGPFCLQSLCNENL-------ELVVFEMSARVD 193 (238)
T ss_dssp HTCCCCCCEEEEEEEECCCCGGGHHHHH-HHHHHHHHHHHHHSTTCCCEEEEEEEEECTTS-------CEEEEEEESSBC
T ss_pred eccCccccCccccccCccccHHHHHHHH-HHHHHHHHHHHHhcccCccccccHhhHhhcCC-------CEEEEEEECCCC
Confidence 3457788888887777778888888885 6667777777644 667999999999955443 246889999985
No 13
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}
Probab=95.89 E-value=0.0061 Score=47.78 Aligned_cols=55 Identities=29% Similarity=0.421 Sum_probs=42.2
Q ss_pred ccCCccEEEEEcCc-chh-HHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEE
Q psy13615 7 MVQRKRVAVLISGT-GTN-LKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKV 67 (263)
Q Consensus 7 m~~~~riavl~SG~-Gsn-l~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~ 67 (263)
|..+.|++|+++|. |+. +..+++. .. ..++++|.+-++...++++|+++|+|+..
T Consensus 1 M~kkirvaIIGaG~ig~~~~~~~l~~----~~--~~el~avas~~~~~~~~~~a~~~~i~~~~ 57 (157)
T d1nvmb1 1 MNQKLKVAIIGSGNIGTDLMIKVLRN----AK--YLEMGAMVGIDAASDGLARAQRMGVTTTY 57 (157)
T ss_dssp CCSCEEEEEECCSHHHHHHHHHHHHH----CS--SEEEEEEECSCTTCHHHHHHHHTTCCEES
T ss_pred CCCCcEEEEEcCcHHHHHHHHHHHhh----CC--cceEEEEEecchhccchhhhhhcCCcccc
Confidence 78888999999997 664 4444421 12 36899998877788999999999999763
No 14
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=94.45 E-value=0.031 Score=45.28 Aligned_cols=63 Identities=13% Similarity=-0.031 Sum_probs=42.9
Q ss_pred CCCCCCCeeEECcccCCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeccccccCCceeeecCcceeeeeCCCCC
Q psy13615 185 KGPNTGGMGAYCPCDILTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEG 261 (263)
Q Consensus 185 ~G~dTGgmga~~pv~i~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~g 261 (263)
.++.++.++..+|.+..+++..+.+. + ...++. ....+.|...+.|+. +..++.++|+|+|++
T Consensus 118 ~~~~~~~~~~~~P~~~~~~~~~~~~~-~----~~~~~~-~~~~~~G~~~~e~~~--------~~~~~~viEvnpR~~ 180 (216)
T d2j9ga3 118 MQRRHQKVVEEAPAPGITPELRRYIG-E----RCAKAC-VDIGYRGAGTFEFLF--------ENGEFYFIEMNTRIQ 180 (216)
T ss_dssp EEETTEEEEEEESCTTCCHHHHHHHH-H----HHHHHH-HHTTCEEEEEEEEEE--------ETTEEEEEEEECSCC
T ss_pred cccccCCeEEeccCccccchhhhhhH-H----HHHHHH-HHcCccCcceeEeEe--------cCCeEEEEeecCccc
Confidence 35566678888899888877766554 2 222232 233478999999994 445557889999986
No 15
>d2z1ea1 d.79.4.1 (A:43-155) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=93.35 E-value=0.011 Score=43.78 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=39.1
Q ss_pred CEEEeeCCCCC---CHHHHHHHHHHh--ccccCCCCceeeeccccccCCCCcCCCcEEEeeeeeEEee
Q psy13615 64 PTKVSTYKHTL---ILSNSLQVMQKV--GAKYSDIAPFSQDGGETAELPGLYQPGDYDLAGFAVGAVE 126 (263)
Q Consensus 64 P~~~v~~~~~~---~~~~~~~i~~~l--~~~~~~~~~~~~~gge~~~l~~~~~~d~i~LAG~m~~~~~ 126 (263)
|.+.+...... +.++.+++++++ .|++ +++.++||+|+++|+..+ ..+...+.|+++
T Consensus 50 P~~~~~~l~lp~~~~~~~l~~i~~gi~~~~~~---~~i~ivGGdT~~~~~~~~---~~is~t~iG~~~ 111 (113)
T d2z1ea1 50 PIALANSMIIGEGLDMEVLKRVLKSMDETARE---VPVPIVTGDTKVVEDKIE---MFVITAGIGIAE 111 (113)
T ss_dssp EEEEEEEEEEETTCCHHHHHHHHHHHHHHHHH---TTCCEEEEEEEEESSSCC---EEEEEEEEEEES
T ss_pred HHHHhhheccCCCccHHHHHHHHHHHHHHHHH---cCcEEecCcceEecCCCc---eEEEEEEEEEec
Confidence 66655543321 347788888888 6677 999999999999988533 233445677665
No 16
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=91.13 E-value=0.33 Score=40.40 Aligned_cols=87 Identities=15% Similarity=0.174 Sum_probs=54.6
Q ss_pred ccceeEEEecCcceeecCCccccccccCCCCCCCCCCeeEECcccCCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEee
Q psy13615 155 GFSLVLCFTDGKTVKVMPPSQDHKRKYNNDKGPNTGGMGAYCPCDILTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKR 234 (263)
Q Consensus 155 g~Sl~~ai~dg~~~~~~~~t~dhkr~~~~d~G~dTGgmga~~pv~i~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~ 234 (263)
++++ ..+.||.++.+.++. .| ....|..+|--....|.+.++++..++++ ++..++.+. +.|.|..-+
T Consensus 85 Eiev-~~i~Dg~~~~i~~i~-e~----i~~~gvhsgds~~~~p~~~l~~~~~~~l~-~~a~kia~~-----l~~~G~~~v 152 (259)
T d1a9xa6 85 EVDV-DAICDGEMVLIGGIM-EH----IEQAGVHSGDSACSLPAYTLSQEIQDVMR-QQVQKLAFE-----LQVRGLMNV 152 (259)
T ss_dssp EEEE-EEEECSSCEEEEEEE-EE----SSCTTSCGGGCCEEESCSSCCHHHHHHHH-HHHHHHHHH-----TTCCEEEEE
T ss_pred EEEE-EEEEeCCcEEEEeee-ec----cccCcceeEeccccccCccCCHHHHHHHH-HHHHHHHHH-----hhhccceeE
Confidence 4554 377787766544443 35 34445666543334466667888877775 444444333 457899999
Q ss_pred ccccccCCceeeecCcceeeeeCCCCC
Q psy13615 235 GFTEGTVTAKVFSSRNRREKEDNPEEG 261 (263)
Q Consensus 235 gl~~~~~~~~~~~~~~~~~~e~n~~~g 261 (263)
.+... ...+.++|+|+|+-
T Consensus 153 ef~v~--------~~~~y~iEvNpR~~ 171 (259)
T d1a9xa6 153 QFAVK--------NNEVYLIEVNPRAA 171 (259)
T ss_dssp EEEEC--------SSCEEEEEEECSCC
T ss_pred EEEEE--------CCEEEEEEcccccC
Confidence 99843 34457999999985
No 17
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]}
Probab=91.12 E-value=0.16 Score=40.36 Aligned_cols=58 Identities=19% Similarity=0.145 Sum_probs=34.9
Q ss_pred eeEECcccCCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeccccccCCceeeecCcceeeeeCCCCCC
Q psy13615 192 MGAYCPCDILTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEGD 262 (263)
Q Consensus 192 mga~~pv~i~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~gd 262 (263)
....++-+..+++...++. ++..++++ ..| |.|.....++.+..+ +..++|+|+|+|.
T Consensus 123 ~~~~~~~~~~~~e~~~~~~-~~~~~~~~---~lg--~~G~~~vef~~~~dg-------~~~~iEin~R~~~ 180 (214)
T d1ulza3 123 LVEIAPSLILTPEKREYYG-NIVTKAAK---EIG--YYNAGTMEFIADQEG-------NLYFIEMNTRIQV 180 (214)
T ss_dssp EEEEESCSSCCHHHHHHHH-HHHHHHHH---HTT--CCEEEEEEEEECTTC-------CEEEEEEECSCCT
T ss_pred eeEEeecccccHHHHHHHH-HHHHHHHH---HcC--CccceEEEEEECCCC-------CEEEEEecCcCCC
Confidence 3344555556666666654 33333333 445 568888898844332 2468899999974
No 18
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=90.13 E-value=0.36 Score=38.44 Aligned_cols=58 Identities=12% Similarity=-0.225 Sum_probs=41.5
Q ss_pred CcccCCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeccccccCCceeeecCcceeeeeCCCCC
Q psy13615 196 CPCDILTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEG 261 (263)
Q Consensus 196 ~pv~i~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~g 261 (263)
.|-...+.+..+++. .+..++++++...-..+.|...+.++.+..+. ..++|+|+|+|
T Consensus 133 ~~~~~~~~~~~~~~~-e~~~~~~~~l~~~~~~~~G~~~ve~~~~~dg~-------~~viEiNpR~~ 190 (235)
T d2r85a2 133 NIPIVLRESLLMDVI-EAGERVVKAAEELMGGLWGPFCLEGVFTPDLE-------FVVFEISARIV 190 (235)
T ss_dssp EEECCCCGGGHHHHH-HHHHHHHHHHHHHSSCCCEEEEEEEEECTTSC-------EEEEEEECSCC
T ss_pred ccCcccchhHHHHHH-HHHHHHHHHHHHhcCCceeeeeEEEEEcCCCC-------EEEEEEeCCCC
Confidence 344445666666664 56667778887777789999999999665432 35789999985
No 19
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=89.27 E-value=0.41 Score=36.70 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=59.9
Q ss_pred CCccEEEEEcCc--chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeCCCCCCHHHHHHHHHHh
Q psy13615 9 QRKRVAVLISGT--GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTYKHTLILSNSLQVMQKV 86 (263)
Q Consensus 9 ~~~riavl~SG~--Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~~~~~~~~~~~~i~~~l 86 (263)
+|+||++|+|.. |++...++++ .. + .++|+++.+|+---.-.+.|+++.-...++.... ..+.+...+
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~--~~-d--~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~-----~~~~l~~~~ 70 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIER--NL-D--RYQVIALTANRNVKDLADAAKRTNAKRAVIADPS-----LYNDLKEAL 70 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHH--TG-G--GEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGG-----GHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHc--CC-C--CcEEEEEEeCCCHHHHHHHHHhhccccceeccHH-----HHHHHHHHh
Confidence 478999999877 9988888854 12 2 4799999998755556889999998877775322 222223333
Q ss_pred ccccCCCCceeeeccccccCC-CCcCCCcEEEe
Q psy13615 87 GAKYSDIAPFSQDGGETAELP-GLYQPGDYDLA 118 (263)
Q Consensus 87 ~~~~~~~~~~~~~gge~~~l~-~~~~~d~i~LA 118 (263)
.. ..+.+..|+.+... ...+.|.++.|
T Consensus 71 --~~---~~~~v~~g~~~l~~~~~~~~D~vv~A 98 (150)
T d1r0ka2 71 --AG---SSVEAAAGADALVEAAMMGADWTMAA 98 (150)
T ss_dssp --TT---CSSEEEESHHHHHHHHTSCCSEEEEC
T ss_pred --hh---cccccccCccchheecccccceeeee
Confidence 32 34555555544311 12456776655
No 20
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=88.25 E-value=0.76 Score=35.16 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=59.1
Q ss_pred CccEEEEEcCc--chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeCCCCCCHHHHHHHHHHhc
Q psy13615 10 RKRVAVLISGT--GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTYKHTLILSNSLQVMQKVG 87 (263)
Q Consensus 10 ~~riavl~SG~--Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~~~~~~~~~~~~i~~~l~ 87 (263)
|+||++|.|.. |++...++++ .. + .++|+++.+|+--..-.+.|+++.-...++... +..+.+-+.+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~--~~-d--~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~-----~~~~~l~~~l- 69 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRH--NP-E--HFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDE-----ASAKLLKTML- 69 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH--CT-T--TEEEEEEEESSCHHHHHHHHHHHCCSEEEESSH-----HHHHHHHHHH-
T ss_pred CCeEEEEcCCcHHHHHHHHHHHh--CC-C--CcEEEEEEecCcHHHHHHHHHHHhhcccccccH-----HHHHHHHHHh-
Confidence 57899999977 8888888844 12 2 479999999876566688899999777776432 2222222333
Q ss_pred cccCCCCceeeecccccc--CCCCcCCCcEEEe
Q psy13615 88 AKYSDIAPFSQDGGETAE--LPGLYQPGDYDLA 118 (263)
Q Consensus 88 ~~~~~~~~~~~~gge~~~--l~~~~~~d~i~LA 118 (263)
.. ...++.+.-|+.+. +-...++|.++.|
T Consensus 70 -~~-~~~~~~~~~g~~~l~~~~~~~~~D~vi~A 100 (151)
T d1q0qa2 70 -QQ-QGSRTEVLSGQQAACDMAALEDVDQVMAA 100 (151)
T ss_dssp -HH-TTCCCEEEESHHHHHHHHTCTTCCEEEEC
T ss_pred -hh-hccccccccChHHHHHHhcCCCCCEEEEe
Confidence 11 11445555454433 2233566776554
No 21
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=87.93 E-value=0.48 Score=36.14 Aligned_cols=48 Identities=13% Similarity=0.186 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeccccccCCceeeecCcceeeeeCCCCCC
Q psy13615 201 LTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEGD 262 (263)
Q Consensus 201 ~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~gd 262 (263)
.+++..+++. ++...+++++ .+.|.+.+.++ +|..++.++|+|+|++.
T Consensus 120 ~~~~~~~~~~-~~~~~~~~~l-----~~~g~~~~~~~--------~~~~~~~v~Evn~Rp~~ 167 (198)
T d3etja3 120 ANAQQQARAE-EMLSAIMQEL-----GYVGVMAMECF--------VTPQGLLINELAPRVHN 167 (198)
T ss_dssp CCHHHHHHHH-HHHHHHHHHH-----TCCEEEEEEEE--------EETTEEEEEEEESSCCG
T ss_pred cccchhhhhh-hhhhHHHHhh-----hhcccchhhee--------ecCCcEEEEEEECCccc
Confidence 4566655553 5555555554 46899999998 56667789999999863
No 22
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.00 E-value=1.5 Score=35.74 Aligned_cols=57 Identities=16% Similarity=0.093 Sum_probs=34.7
Q ss_pred eEECcccCCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeccccccCCceeeecCcceeeeeCCCCC
Q psy13615 193 GAYCPCDILTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEG 261 (263)
Q Consensus 193 ga~~pv~i~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~g 261 (263)
..+.+.+..+++..+++. +. +.+.++..+ +.|.....++.+..++++ .++|+|+|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~-~~---a~~~~~~lg--~~g~~~vd~~~~~~~g~~------yviEiNpR~~ 202 (267)
T d1w96a3 146 IEEAPVTIAKAETFHEME-KA---AVRLGKLVG--YVSAGTVEYLYSHDDGKF------YFLELNPRLQ 202 (267)
T ss_dssp EEEESCCSSCHHHHHHHH-HH---HHHHHHHHT--CCEEEEEEEEECTTTCCE------EEEEEECSCC
T ss_pred cceeecccCchHHHHHHH-HH---HHHHHHHhC--CccccceeeeeeCCCCcE------EEEEeccccc
Confidence 345555556776666654 33 334443445 567777788855444433 5899999986
No 23
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]}
Probab=76.53 E-value=3.5 Score=31.44 Aligned_cols=49 Identities=16% Similarity=0.174 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeccccccCCceeeecCcceeeeeCCCCCC
Q psy13615 201 LTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEGD 262 (263)
Q Consensus 201 ~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~gd 262 (263)
.+++..+++. ++..++++.+ | +.|+..+.++.+..+ + +-++|+|+|+|.
T Consensus 133 ~~~~~~~~i~-~~a~~~~~~l---g--~~g~~~id~~~~~~g-~------~~viEiN~~pg~ 181 (211)
T d1e4ea2 133 LSAEERGRIQ-ETVKKIYKTL---G--CRGLARVDMFLQDNG-R------IVLNEVNTLPGF 181 (211)
T ss_dssp SCHHHHHHHH-HHHHHHHHHT---T--CEEEEEEEEEECTTC-C------EEEEEEESSCCC
T ss_pred ccHhhhhhhH-HHHHHHHHhh---c--cCCeeEEEEEEcCCC-C------EEEEEEeCCCCC
Confidence 3555555553 5554555544 3 568999999966433 2 358899999984
No 24
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]}
Probab=74.34 E-value=3.1 Score=31.42 Aligned_cols=27 Identities=11% Similarity=-0.130 Sum_probs=20.9
Q ss_pred CeEEEEeeccccccCCceeeecCcceeeeeCCCCC
Q psy13615 227 PFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEG 261 (263)
Q Consensus 227 ~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~g 261 (263)
.+.|.....++ .+..++.++|+|+|+|
T Consensus 147 ~~~g~~~~e~~--------~~~~~~~viEin~R~~ 173 (206)
T d1kjqa3 147 GGYGLFGVELF--------VCGDEVIFSEVSPRPH 173 (206)
T ss_dssp CSSEEEEEEEE--------EETTEEEEEEEESSCC
T ss_pred hceeeeccccc--------cccCCceEEEeecCcc
Confidence 35688888888 4555567889999996
No 25
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}
Probab=73.71 E-value=2.3 Score=33.05 Aligned_cols=59 Identities=17% Similarity=0.150 Sum_probs=34.2
Q ss_pred CCeeEECcccCCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeccccccCCceeeecCcceeeeeCCCCC
Q psy13615 190 GGMGAYCPCDILTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEG 261 (263)
Q Consensus 190 Ggmga~~pv~i~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~g 261 (263)
+....+.+..-.+++..+++. ++...+.+.+ | +.|...+.++.+..+ .+-++|+|.++|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~l---g--~~~~~~iD~~~d~~g-------~~~~lEvN~~Pg 188 (228)
T d1ehia2 130 NSAVHFQIPAQLSPEVTKEVK-QMALDAYKVL---N--LRGEARMDFLLDENN-------VPYLGEPNTLPG 188 (228)
T ss_dssp CTTCEEESSCCCCHHHHHHHH-HHHHHHHHHT---T--CCEEEEEEEEECTTC-------CEEEEEEESSCC
T ss_pred cccccccchhhhhHHHHHHHH-HHHHHHHhhh---h--cCCeeeEEEEEcCCC-------cEEEEEecCCCC
Confidence 333344444445677766664 4444444443 3 456666787754433 246889999998
No 26
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=66.80 E-value=5.5 Score=31.23 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=41.8
Q ss_pred ccCCccEEEEEcCc--chhHHHHHHHhccccCCCCceEEEEEecC---CCC-----hhhHHHHHcCCCEEEeeC
Q psy13615 7 MVQRKRVAVLISGT--GTNLKSLLEATSNRSDIMRAEIVLVVSNK---HNV-----EGLNIARNAGIPTKVSTY 70 (263)
Q Consensus 7 m~~~~riavl~SG~--Gsnl~al~~~~~~~~~~l~~~iv~Visn~---~~a-----~gl~~A~~~gIP~~~v~~ 70 (263)
+...+||+|=+||. .+-|..++.. ......+.++.++..|+ +++ ...+.|+++|+|.++...
T Consensus 10 l~~~kkvlva~SGG~DS~~Ll~ll~~--~~~~~~~~~l~~~~vdh~~r~~s~~~~~~~~~~~~~~~i~~~i~~~ 81 (227)
T d1ni5a1 10 LLTSRQILVAFSGGLDSTVLLHQLVQ--WRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERV 81 (227)
T ss_dssp HTTCSEEEEECCSBHHHHHHHHHHHH--HHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred cCCCCcEEEEecCcHHHHHHHHHHHH--HHHhCCCceEEEEEeCCCCCcchhhhHHHHHHHHhhccCcceeeec
Confidence 34567999999998 3444445532 22223457899888884 332 367799999999988754
No 27
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Probab=66.59 E-value=0.92 Score=35.52 Aligned_cols=25 Identities=32% Similarity=0.469 Sum_probs=21.5
Q ss_pred eeeccCCccEEEEEcCc-chhHHHHH
Q psy13615 4 KTRMVQRKRVAVLISGT-GTNLKSLL 28 (263)
Q Consensus 4 ~~~m~~~~riavl~SG~-Gsnl~al~ 28 (263)
|-+|+.|+||+|+++|+ ||-+..++
T Consensus 1 ~~~~~~m~KI~ViGaG~wGtAlA~~L 26 (189)
T d1n1ea2 1 KDELLYLNKAVVFGSGAFGTALAMVL 26 (189)
T ss_dssp CCCCCCEEEEEEECCSHHHHHHHHHH
T ss_pred CCccceeceEEEECCCHHHHHHHHHH
Confidence 34789999999999999 99887776
No 28
>d3c9ua1 d.79.4.1 (A:1-137) Thiamine monophosphate kinase (ThiL) N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=65.43 E-value=2.7 Score=31.12 Aligned_cols=50 Identities=14% Similarity=0.151 Sum_probs=34.9
Q ss_pred HHHHHcCCCEEEeeCCCCC---CHHHHHHHHHHh--ccccCCCCceeeeccccccCCC
Q psy13615 56 NIARNAGIPTKVSTYKHTL---ILSNSLQVMQKV--GAKYSDIAPFSQDGGETAELPG 108 (263)
Q Consensus 56 ~~A~~~gIP~~~v~~~~~~---~~~~~~~i~~~l--~~~~~~~~~~~~~gge~~~l~~ 108 (263)
+.|..-+.|.+.+.....+ +.++.+++++++ .|+. +++.++||.|..-++
T Consensus 71 DI~amGa~P~~~~~sl~lp~~~~~~~~~~~~~Gi~~~~~~---~~~~liGGdt~~~~~ 125 (137)
T d3c9ua1 71 DVIANGGLPKWALISLNLPEDLEVSYVERFYIGVKRACEF---YKCEVVGGNISKSEK 125 (137)
T ss_dssp HHHHTTCEEEEEEEEEEECTTSBHHHHHHHHHHHHHHHHH---HTCEEEEEEEEECSS
T ss_pred hhhhcCCccceeEeeeecCcCcchhHhHHHHhhhhhhhee---eCeEEEcccccCCCC
Confidence 3444556687776554332 337788888888 5666 999999999987543
No 29
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=61.52 E-value=8.2 Score=28.33 Aligned_cols=51 Identities=22% Similarity=0.252 Sum_probs=32.2
Q ss_pred CccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEe
Q psy13615 10 RKRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVS 68 (263)
Q Consensus 10 ~~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v 68 (263)
|+||+|+..|. |+.+...+.+ .+ ...+|. ..| ++...+++|++.++.....
T Consensus 1 Mk~I~IIG~G~mG~sla~~L~~----~g-~~~~I~--~~D-~~~~~~~~a~~~~~~~~~~ 52 (171)
T d2g5ca2 1 MQNVLIVGVGFMGGSFAKSLRR----SG-FKGKIY--GYD-INPESISKAVDLGIIDEGT 52 (171)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH----TT-CCSEEE--EEC-SCHHHHHHHHHTTSCSEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHh----cC-CCeEEE--EEE-CChHHHHHHHHhhcchhhh
Confidence 46899999988 7666544421 12 223443 344 4677889999999765444
No 30
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=61.41 E-value=4 Score=29.17 Aligned_cols=33 Identities=9% Similarity=0.178 Sum_probs=27.0
Q ss_pred CceEEEEEecCCCChhhHHHHHcCCCEEEeeCCCC
Q psy13615 39 RAEIVLVVSNKHNVEGLNIARNAGIPTKVSTYKHT 73 (263)
Q Consensus 39 ~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~~~~ 73 (263)
..++++++-|++ ..++.|+++|||++.+.+.+|
T Consensus 117 ~~~i~~~igD~~--~dv~a~~~~Gi~~~~V~~Gdf 149 (149)
T d1ltqa1 117 HFDVKLAIDDRT--QVVEMWRRIGVECWQVASGDF 149 (149)
T ss_dssp TCEEEEEEECCH--HHHHHHHHTTCCEEECSCCCC
T ss_pred CCceEEEEcCCH--HHHHHHHHCCCcEEEeCCCCC
Confidence 358888888875 678899999999999977654
No 31
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=60.51 E-value=16 Score=29.04 Aligned_cols=70 Identities=26% Similarity=0.134 Sum_probs=38.3
Q ss_pred CccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEecC---CCC---------hhhHHHHHcCCCEEEeeCCCCCCH
Q psy13615 10 RKRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSNK---HNV---------EGLNIARNAGIPTKVSTYKHTLIL 76 (263)
Q Consensus 10 ~~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn~---~~a---------~gl~~A~~~gIP~~~v~~~~~~~~ 76 (263)
|+||+++.||. -|++. +..+ .++ +.+|+++++=. .+. -.-..|+..|||........ ...
T Consensus 3 ~~~V~vl~SGGKDS~lA-l~~a--~~~---G~eV~~L~t~~~~~~~s~~~h~~~~~ll~~qAealgiPl~~~~~~~-~~e 75 (226)
T d2d13a1 3 LADVAVLYSGGKDSNYA-LYWA--LKS---GLRVRYLVSMVSENEESYMYHTPNVELTSLQARALGIPIIKGFTKG-EKE 75 (226)
T ss_dssp SCEEEEECCSSHHHHHH-HHHH--HHT---TCEEEEEEEEECCC---------CCTTHHHHHHHHTCCEEEEEC---CTT
T ss_pred ceeEEEEecCcHHHHHH-HHHH--HHc---CCeeEEEEEEecCCCCcCcccCCCHHHHHHHHHhcCCCceEEecCC-cch
Confidence 55899999998 55554 4422 232 35676554431 111 23456999999987665432 122
Q ss_pred HHHHHHHHHh
Q psy13615 77 SNSLQVMQKV 86 (263)
Q Consensus 77 ~~~~~i~~~l 86 (263)
+..+++.+.+
T Consensus 76 ~~~~~l~~~l 85 (226)
T d2d13a1 76 KEVEDLKNVL 85 (226)
T ss_dssp SHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444455555
No 32
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=59.82 E-value=10 Score=27.63 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=52.5
Q ss_pred cCCccEEEEEcCc-----chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeCCCCCCHHHHHHH
Q psy13615 8 VQRKRVAVLISGT-----GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTYKHTLILSNSLQV 82 (263)
Q Consensus 8 ~~~~riavl~SG~-----Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~~~~~~~~~~~~i 82 (263)
|.++||.+-..+. |.++-+.+ .... ++++.-+-+|.|...-++.|++.+-....++.....+....+++
T Consensus 1 ~~k~kVvi~~~~gD~H~lG~~mva~~--l~~~----G~~V~~LG~~~p~e~iv~a~~~~~~d~v~lS~~~~~~~~~~~~~ 74 (137)
T d1ccwa_ 1 MEKKTIVLGVIGSDCHAVGNKILDHA--FTNA----GFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGL 74 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHH--HHHT----TCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTH
T ss_pred CCCCEEEEEecCCChhHHHHHHHHHH--HHHC----CCeEEecccccCHHHHHHHHHhcCCCEEEEeeccccchHHHHHH
Confidence 3467787766654 76666655 3222 57999999998888889999999988888876554444666677
Q ss_pred HHHh
Q psy13615 83 MQKV 86 (263)
Q Consensus 83 ~~~l 86 (263)
++.+
T Consensus 75 ~~~l 78 (137)
T d1ccwa_ 75 RQKC 78 (137)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7766
No 33
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=58.51 E-value=4.7 Score=32.44 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=36.3
Q ss_pred ccEEEEEcCc-chhHHHH--HHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeCC
Q psy13615 11 KRVAVLISGT-GTNLKSL--LEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTYK 71 (263)
Q Consensus 11 ~riavl~SG~-Gsnl~al--~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~~ 71 (263)
|||.++++|+ |+.+.++ .++.. + -+++|..+.+.+ ....+..+++|+++..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~-~---~G~eV~~i~~~~--~~~~~~~~~~~~~~~~~~~~ 58 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLM-A---QGWQVRWLGTAD--RMEADLVPKHGIEIDFIRIS 58 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHH-T---TTCEEEEEECTT--STHHHHGGGGTCEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHH-h---CCCEEEEEEeCC--cchhhcccccCCcEEEEECC
Confidence 6899888776 8986544 44432 1 146887666644 23456778899998887654
No 34
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]}
Probab=58.21 E-value=7.5 Score=29.40 Aligned_cols=49 Identities=12% Similarity=0.114 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeccccccCCceeeecCcceeeeeCCCCCC
Q psy13615 201 LTEAQKKEIHDTILMRVIKKMIAEGTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEGD 262 (263)
Q Consensus 201 ~~~~~~~~i~~~il~~~i~~~~~eg~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~gd 262 (263)
.+.+..+++. ++...+.+.+. +.|...+.++.+..| + +-++|+|.|+|-
T Consensus 133 ~~~~~~~~~~-~~~~~~~~~~~-----~~g~~~vdf~~d~~g-~------~~~lEiN~~pg~ 181 (210)
T d1iowa2 133 LEASQEANLQ-ALVLKAWTTLG-----CKGWGRIDVMLDSDG-Q------FYLLEANTSPGM 181 (210)
T ss_dssp CCHHHHHHHH-HHHHHHHHHHT-----CCSEEEEEEEECTTS-C------EEEEEEESSCCC
T ss_pred cccccchhHH-HHHHHHHHHhC-----CCCceEEEEEECCCC-C------EEEEEEeCCCCC
Confidence 4555555553 44445555542 568888888865443 2 348999999983
No 35
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]}
Probab=57.39 E-value=7 Score=28.81 Aligned_cols=27 Identities=22% Similarity=0.068 Sum_probs=18.0
Q ss_pred CCCeEEEEeeccccccCCceeeecCcceeeeeCCCCCC
Q psy13615 225 GTPFVGEKKRGFTEGTVTAKVFSSRNRREKEDNPEEGD 262 (263)
Q Consensus 225 g~~~~G~L~~gl~~~~~~~~~~~~~~~~~~e~n~~~gd 262 (263)
+..+.| +.++.+. .+..|+|+|+|+|-
T Consensus 142 ~~g~~~---vD~~~~~--------~~~~vlEiN~r~g~ 168 (192)
T d1uc8a2 142 GGGVVA---VDLFESE--------RGLLVNEVNHTMEF 168 (192)
T ss_dssp TCSEEE---EEEEEET--------TEEEEEEEETTCCC
T ss_pred hccccc---eEEEecC--------CCEEEEEEcCCCch
Confidence 444544 5777443 44568899999973
No 36
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}
Probab=49.75 E-value=4.3 Score=30.18 Aligned_cols=22 Identities=18% Similarity=0.391 Sum_probs=18.4
Q ss_pred ccCCccEEEEEcCc-chhHHHHH
Q psy13615 7 MVQRKRVAVLISGT-GTNLKSLL 28 (263)
Q Consensus 7 m~~~~riavl~SG~-Gsnl~al~ 28 (263)
|.+++||+|+.+|. |+.+...+
T Consensus 2 m~~~~KI~IIGaG~VG~~~A~~l 24 (146)
T d1ez4a1 2 MPNHQKVVLVGDGAVGSSYAFAM 24 (146)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHH
Confidence 88888999999988 88776655
No 37
>d2zoda1 d.79.4.1 (A:3-154) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]}
Probab=48.59 E-value=7.8 Score=28.97 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=30.9
Q ss_pred HHHHHHHHHHh--ccccCCCCceeeeccccccCCCCcCCCcEEEeeeeeEEeecC
Q psy13615 76 LSNSLQVMQKV--GAKYSDIAPFSQDGGETAELPGLYQPGDYDLAGFAVGAVEKA 128 (263)
Q Consensus 76 ~~~~~~i~~~l--~~~~~~~~~~~~~gge~~~l~~~~~~d~i~LAG~m~~~~~~~ 128 (263)
.++.+++++++ .|+. +++.++||.|.+-|+ . .++..+.|+++++
T Consensus 105 ~~~l~~i~~Gi~~~~~~---~g~~lvGGdt~~~~~-----~-~i~~tv~G~v~~~ 150 (152)
T d2zoda1 105 IEIFREVIRGALDKLRE---AKTVLLGGHTIDDKE-----P-KFGLSVAGICPEG 150 (152)
T ss_dssp HHHHHHHHHHHHHHHHH---TTCEEEEEEEEECSS-----C-EEEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHHHhh---cCCeEEeeeecCCCC-----c-EEEEEEEEEeCCC
Confidence 36778888888 5566 999999999987543 2 3455566666544
No 38
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}
Probab=45.44 E-value=13 Score=27.08 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=31.4
Q ss_pred CccEEEEEcCc-chh-HHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCC
Q psy13615 10 RKRVAVLISGT-GTN-LKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIP 64 (263)
Q Consensus 10 ~~riavl~SG~-Gsn-l~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP 64 (263)
+.||++++.|. |.. ...++. ... ..++++|++.+ ...+.+.++++++|
T Consensus 1 Kiri~iIG~G~~g~~~~~~~l~----~~~--~~~i~~v~d~~-~~~~~~~~~~~~~~ 50 (164)
T d1tlta1 1 KLRIGVVGLGGIAQKAWLPVLA----AAS--DWTLQGAWSPT-RAKALPICESWRIP 50 (164)
T ss_dssp CEEEEEECCSTHHHHTHHHHHH----SCS--SEEEEEEECSS-CTTHHHHHHHHTCC
T ss_pred CCEEEEEcCCHHHHHHHHHHHH----hCC--CcEEEEEEech-hHhhhhhhhccccc
Confidence 46899998887 643 333342 112 36888777655 45567888999987
No 39
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=42.22 E-value=11 Score=28.22 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=31.7
Q ss_pred CccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCC
Q psy13615 10 RKRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIP 64 (263)
Q Consensus 10 ~~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP 64 (263)
+.||++++.|. |++....+.. .+ ..+++++.+.++ ..+.+.|+++++|
T Consensus 1 kiki~iIG~G~~g~~~~~~l~~----~~--~~~i~ai~d~~~-~~~~~~~~~~~~~ 49 (184)
T d1ydwa1 1 QIRIGVMGCADIARKVSRAIHL----AP--NATISGVASRSL-EKAKAFATANNYP 49 (184)
T ss_dssp CEEEEEESCCTTHHHHHHHHHH----CT--TEEEEEEECSSH-HHHHHHHHHTTCC
T ss_pred CeEEEEEcCCHHHHHHHHHHHh----CC--CCEEEEEEeCCc-cccccchhccccc
Confidence 46899999887 7765444421 12 368888766553 3456678889987
No 40
>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}
Probab=39.31 E-value=14 Score=27.39 Aligned_cols=38 Identities=21% Similarity=0.422 Sum_probs=24.5
Q ss_pred cCCccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEecCCC
Q psy13615 8 VQRKRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSNKHN 51 (263)
Q Consensus 8 ~~~~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~ 51 (263)
|.+.|++++..|. |+..-..+ . +.. ..++++|++.++.
T Consensus 1 M~kirvgiiG~G~ig~~~~~~l---~-~~~--~~elvav~~~~~~ 39 (170)
T d1f06a1 1 MTNIRVAIVGYGNLGRSVEKLI---A-KQP--DMDLVGIFSRRAT 39 (170)
T ss_dssp CCCEEEEEECCSHHHHHHHHHH---T-TCS--SEEEEEEEESSSC
T ss_pred CCcceEEEECChHHHHHHHHHH---H-hCC--CcEEEEEEecccc
Confidence 3477999999988 65444333 1 112 4789988876643
No 41
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}
Probab=37.93 E-value=14 Score=27.51 Aligned_cols=53 Identities=25% Similarity=0.317 Sum_probs=32.0
Q ss_pred cCCccEEEEEcCc-chh--HHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEE
Q psy13615 8 VQRKRVAVLISGT-GTN--LKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKV 67 (263)
Q Consensus 8 ~~~~riavl~SG~-Gsn--l~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~ 67 (263)
|.+.|+++.+.|. |+. +.++. ...+ ..++++|.+.++ ...-+.+++++++..+
T Consensus 1 MkkirigiIG~G~~g~~~h~~~l~----~~~~--~~~i~~v~d~~~-~~~~~~~~~~~~~~~~ 56 (181)
T d1zh8a1 1 LRKIRLGIVGCGIAARELHLPALK----NLSH--LFEITAVTSRTR-SHAEEFAKMVGNPAVF 56 (181)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHH----TTTT--TEEEEEEECSSH-HHHHHHHHHHSSCEEE
T ss_pred CCCcEEEEEcCCHHHHHHHHHHHH----hCCC--CeEEEEEEeccH-hhhhhhhcccccccee
Confidence 3467899998887 543 22222 1111 258888776543 4456678889988543
No 42
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]}
Probab=36.48 E-value=47 Score=25.30 Aligned_cols=62 Identities=18% Similarity=0.211 Sum_probs=38.5
Q ss_pred eccC-CccEEEEEcCc--chhHHHHHHHhccccCCCC-ceEEEEEecCCC---C-----hhhHHHHHcCCCEEEeeC
Q psy13615 6 RMVQ-RKRVAVLISGT--GTNLKSLLEATSNRSDIMR-AEIVLVVSNKHN---V-----EGLNIARNAGIPTKVSTY 70 (263)
Q Consensus 6 ~m~~-~~riavl~SG~--Gsnl~al~~~~~~~~~~l~-~~iv~Visn~~~---a-----~gl~~A~~~gIP~~~v~~ 70 (263)
+|.+ ..||+|-+||. .+-|..++.. .+ ...+ .++.++..|+.. + .+.+.|+++|||.++...
T Consensus 19 ~l~~~~~kv~Va~SGG~DS~~Ll~lL~~--~~-~~~~~~~i~~~~vdh~~r~~s~~~~~~~~~~~~~l~i~~~i~~~ 92 (216)
T d1wy5a1 19 KIFSGERRVLIAFSGGVDSVVLTDVLLK--LK-NYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKE 92 (216)
T ss_dssp CSCSSCCEEEEECCSSHHHHHHHHHHHH--ST-TTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred hccCCCCeEEEEeCCcHHHHHHHHHHHH--HH-HhcCCCcEEEEEeecccccchhhhhhHHHHHHHhhhhhhhhhcc
Confidence 4554 45899999998 3444445532 11 2222 367777777432 1 356778999999988754
No 43
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]}
Probab=35.03 E-value=32 Score=23.95 Aligned_cols=18 Identities=33% Similarity=0.571 Sum_probs=13.1
Q ss_pred ccEEEEEcCcc--hhHHHHH
Q psy13615 11 KRVAVLISGTG--TNLKSLL 28 (263)
Q Consensus 11 ~riavl~SG~G--snl~al~ 28 (263)
+||++|=||-| |-++.|.
T Consensus 1 mkIgifDSGiGGLtVl~~l~ 20 (105)
T d1b74a1 1 MKIGIFDSGVGGLTVLKAIR 20 (105)
T ss_dssp CEEEEEESSSTHHHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHHH
Confidence 47999999997 4445544
No 44
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=33.53 E-value=24 Score=25.46 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=28.4
Q ss_pred ccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCC
Q psy13615 11 KRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGI 63 (263)
Q Consensus 11 ~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gI 63 (263)
+||+|+..|. |+.+...+. +. +.+|. ..|+ +...+++|++.|+
T Consensus 1 MkI~iIG~G~mG~~lA~~l~----~~---g~~V~--~~d~-~~~~~~~a~~~~~ 44 (165)
T d2f1ka2 1 MKIGVVGLGLIGASLAGDLR----RR---GHYLI--GVSR-QQSTCEKAVERQL 44 (165)
T ss_dssp CEEEEECCSHHHHHHHHHHH----HT---TCEEE--EECS-CHHHHHHHHHTTS
T ss_pred CEEEEEeecHHHHHHHHHHH----HC---CCEEE--EEEC-CchHHHHHHHhhc
Confidence 4799999998 887754442 11 34664 3454 4566888888885
No 45
>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}
Probab=32.30 E-value=24 Score=25.17 Aligned_cols=55 Identities=9% Similarity=0.229 Sum_probs=29.9
Q ss_pred ccEEEEE-cCc-chhHHHHHHHhccc------c---CC-CCceEEEEEecCCCC--hhhHHHHHcCCCEE
Q psy13615 11 KRVAVLI-SGT-GTNLKSLLEATSNR------S---DI-MRAEIVLVVSNKHNV--EGLNIARNAGIPTK 66 (263)
Q Consensus 11 ~riavl~-SG~-Gsnl~al~~~~~~~------~---~~-l~~~iv~Visn~~~a--~gl~~A~~~gIP~~ 66 (263)
+||++.. ||+ |+.+..++.+.-.. . .. -..|++.=.| +|++ .-++.|.++++|..
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~~~~~DVvIDFS-~p~~~~~~l~~~~~~~~p~V 69 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEELDSPDVVIDFS-SPEALPKTVDLCKKYRAGLV 69 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEECSCCSEEEECS-CGGGHHHHHHHHHHHTCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHHhccCCEEEEec-CHHHHHHHHHHHHhcCCCEE
Confidence 4799998 688 98887776331000 0 00 0123322222 2333 44788888888853
No 46
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}
Probab=31.34 E-value=14 Score=27.66 Aligned_cols=54 Identities=17% Similarity=0.102 Sum_probs=32.4
Q ss_pred eccCCccEEEEEcCcchhHHHHHHHhccccCCCCceEEEE-EecCCCChhhHHHHHcCCCEEE
Q psy13615 6 RMVQRKRVAVLISGTGTNLKSLLEATSNRSDIMRAEIVLV-VSNKHNVEGLNIARNAGIPTKV 67 (263)
Q Consensus 6 ~m~~~~riavl~SG~Gsnl~al~~~~~~~~~~l~~~iv~V-isn~~~a~gl~~A~~~gIP~~~ 67 (263)
+++.+.|+.=+++|.|.+...+.+. ..++.+| +|...-..+.+++++.|++...
T Consensus 27 ~~~~~grvLDiGcG~G~~~~~la~~--------g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~ 81 (198)
T d2i6ga1 27 KVVAPGRTLDLGCGNGRNSLYLAAN--------GYDVTAWDKNPASMANLERIKAAEGLDNLQ 81 (198)
T ss_dssp TTSCSCEEEEETCTTSHHHHHHHHT--------TCEEEEEESCHHHHHHHHHHHHHTTCTTEE
T ss_pred ccCCCCcEEEECCCCCHHHHHHHHH--------hhhhccccCcHHHHHHHHHHhhhccccchh
Confidence 3556778888999999999887622 2466554 2211112233445666776433
No 47
>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}
Probab=31.34 E-value=18 Score=28.02 Aligned_cols=49 Identities=18% Similarity=0.192 Sum_probs=30.8
Q ss_pred CccEEEEEcCc-chh-HHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCE
Q psy13615 10 RKRVAVLISGT-GTN-LKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPT 65 (263)
Q Consensus 10 ~~riavl~SG~-Gsn-l~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~ 65 (263)
+.||+++..|. |++ +...+ . +.. ..++++|++.++ ..+.+.|+++|++.
T Consensus 33 ~iriaiIG~G~~~~~~~~~~~---~-~~~--~~~ivav~d~~~-~~a~~~~~~~~i~~ 83 (221)
T d1h6da1 33 RFGYAIVGLGKYALNQILPGF---A-GCQ--HSRIEALVSGNA-EKAKIVAAEYGVDP 83 (221)
T ss_dssp CEEEEEECCSHHHHHTHHHHT---T-TCS--SEEEEEEECSCH-HHHHHHHHHTTCCG
T ss_pred CEEEEEEcCcHHHHHHHHHHH---H-hCC--CceEEEEecCCH-HHHHHHHHhhcccc
Confidence 46899998876 432 22222 1 212 478998876554 44577889999873
No 48
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=30.92 E-value=23 Score=23.69 Aligned_cols=16 Identities=19% Similarity=0.254 Sum_probs=10.0
Q ss_pred CChhhHHHHHcCCCEE
Q psy13615 51 NVEGLNIARNAGIPTK 66 (263)
Q Consensus 51 ~a~gl~~A~~~gIP~~ 66 (263)
+-+-++.|++.|||++
T Consensus 73 ~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 73 DNPEIVRARMERVPIE 88 (89)
T ss_dssp TCHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHcCCCcc
Confidence 4455666666666654
No 49
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}
Probab=30.60 E-value=19 Score=26.14 Aligned_cols=46 Identities=13% Similarity=0.346 Sum_probs=28.3
Q ss_pred ccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCE
Q psy13615 11 KRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPT 65 (263)
Q Consensus 11 ~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~ 65 (263)
+||+|+.+|+ |+ +++..+. +. +.++ .++|+......+.++++|+.+
T Consensus 1 MkIg~IG~G~mG~---al~~~l~-~~---~~~i--~v~~r~~~~~~~l~~~~g~~~ 47 (152)
T d2ahra2 1 MKIGIIGVGKMAS---AIIKGLK-QT---PHEL--IISGSSLERSKEIAEQLALPY 47 (152)
T ss_dssp CEEEEECCSHHHH---HHHHHHT-TS---SCEE--EEECSSHHHHHHHHHHHTCCB
T ss_pred CEEEEEeccHHHH---HHHHHHH-hC---CCeE--EEEcChHHhHHhhccccceee
Confidence 4799998888 75 4443221 11 3566 467765555566678888653
No 50
>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=29.30 E-value=34 Score=25.89 Aligned_cols=59 Identities=12% Similarity=0.157 Sum_probs=36.3
Q ss_pred CCccEEE---EEcCcchhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeC
Q psy13615 9 QRKRVAV---LISGTGTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTY 70 (263)
Q Consensus 9 ~~~riav---l~SG~Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~ 70 (263)
...|+.+ +++ +|+.+.++++... +.+ ....-++++.|+....|-++.+++|+|+..+-+
T Consensus 116 ~g~rVlIVDDvi~-TG~T~~~~~~ll~-~~G-a~vv~v~vlid~~~~~gr~~l~~~g~~v~SL~~ 177 (191)
T d1y0ba1 116 DQDHVLIIDDFLA-NGQAAHGLVSIVK-QAG-ASIAGIGIVIEKSFQPGRDELVKLGYRVESLAR 177 (191)
T ss_dssp TTCEEEEEEEEES-SCHHHHHHHHHHH-HTT-CEEEEEEEEEEETTSTHHHHHHHTTCCEEEEEE
T ss_pred CCceEEEhHHhhh-hChHHHHHHHHHH-HCC-CEEEEEEEEEEcCCcCHHHHHHHCCCCEEEEEE
Confidence 3456664 333 3455666654432 222 223335566888888888999999999887754
No 51
>d2w6ka1 c.151.1.1 (A:1-139) Cobalamin biosynthesis protein CobE {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.64 E-value=27 Score=25.49 Aligned_cols=61 Identities=10% Similarity=0.043 Sum_probs=37.5
Q ss_pred CccEEE-EEcCcchhHHHHHHHhcc--ccCCC-C--ceEEEEEecCCCChh-hHHHHHcCCCEEEeeC
Q psy13615 10 RKRVAV-LISGTGTNLKSLLEATSN--RSDIM-R--AEIVLVVSNKHNVEG-LNIARNAGIPTKVSTY 70 (263)
Q Consensus 10 ~~riav-l~SG~Gsnl~al~~~~~~--~~~~l-~--~~iv~Visn~~~a~g-l~~A~~~gIP~~~v~~ 70 (263)
|+++++ +..-+|+..+.+.+++.. +...+ . .+-.+.+-.+.+-+| ++.|+++|+|..+++.
T Consensus 6 Pr~lvvGiGcrrg~~~e~i~~ai~~al~~~~l~~~~i~~iASid~K~dE~gl~e~a~~l~~pl~~~~~ 73 (139)
T d2w6ka1 6 PSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLAP 73 (139)
T ss_dssp CCCEEEEEEECTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEEEECH
T ss_pred CCeEEEeeccCCCCCHHHHHHHHHHHHHHcCCCHHHhhheecccccCCCHHHHHHHHHhCCCeEEECH
Confidence 444433 677778776666543321 11122 2 234555666767677 7889999999999964
No 52
>d1j5pa4 c.2.1.3 (A:-1-108,A:220-241) Hypothetical protein TM1643 {Thermotoga maritima [TaxId: 2336]}
Probab=28.18 E-value=35 Score=23.93 Aligned_cols=77 Identities=13% Similarity=0.006 Sum_probs=41.8
Q ss_pred CccEEEEEcCc-chhHHHHHHHhcc----c----------cCC----CCceEEEEEecCCCC-hhhHHHHHcCCCEEEee
Q psy13615 10 RKRVAVLISGT-GTNLKSLLEATSN----R----------SDI----MRAEIVLVVSNKHNV-EGLNIARNAGIPTKVST 69 (263)
Q Consensus 10 ~~riavl~SG~-Gsnl~al~~~~~~----~----------~~~----l~~~iv~Visn~~~a-~gl~~A~~~gIP~~~v~ 69 (263)
.+||+++.-|+ |+.+..+++.... + ... -..|++...+-.... .-...|-+.|.++...+
T Consensus 2 ~mkV~iiG~G~iG~~v~~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~DiVve~t~~~~~~~~~~~aL~~gk~vvi~s 81 (132)
T d1j5pa4 2 HMTVLIIGMGNIGKKLVELGNFEKIYAYDRISKDIPGVVRLDEFQVPSDVSTVVECASPEAVKEYSLQILKNPVNYIIIS 81 (132)
T ss_dssp CCEEEEECCSHHHHHHHHHSCCSEEEEECSSCCCCSSSEECSSCCCCTTCCEEEECSCHHHHHHHHHHHTTSSSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHhhCcceeeeeccccCcccCCHHHHhccCCCCEEEecCcchhHHHHHHHHHhcCCCEEEec
Confidence 46899999988 8766655421000 0 000 123444433321111 23455667888888887
Q ss_pred CCCCCCHHHHHHHHHHh
Q psy13615 70 YKHTLILSNSLQVMQKV 86 (263)
Q Consensus 70 ~~~~~~~~~~~~i~~~l 86 (263)
...+.+.++.+++.+..
T Consensus 82 ~~~lad~~~~~~l~~~A 98 (132)
T d1j5pa4 82 TSAFADEVFRERFFSEL 98 (132)
T ss_dssp GGGGGSHHHHHHHHHHH
T ss_pred chhhcchhHHHHHHHHH
Confidence 76666655666666654
No 53
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}
Probab=27.08 E-value=15 Score=27.06 Aligned_cols=36 Identities=33% Similarity=0.431 Sum_probs=22.6
Q ss_pred ccCCccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEec
Q psy13615 7 MVQRKRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSN 48 (263)
Q Consensus 7 m~~~~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn 48 (263)
|..++||+++.+|. |+.+..++.. + .+ .|++++=.|
T Consensus 4 ~~k~~KI~IIGaG~VG~~lA~~l~~---~--~~-~el~L~D~~ 40 (154)
T d1pzga1 4 VQRRKKVAMIGSGMIGGTMGYLCAL---R--EL-ADVVLYDVV 40 (154)
T ss_dssp CSCCCEEEEECCSHHHHHHHHHHHH---H--TC-CEEEEECSS
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHh---C--CC-ceEEEEEec
Confidence 44466899999988 8877655521 1 23 477655333
No 54
>d3by5a1 c.151.1.1 (A:8-130) Cobalamin biosynthesis protein CobE {Agrobacterium tumefaciens [TaxId: 358]}
Probab=25.25 E-value=46 Score=23.56 Aligned_cols=58 Identities=14% Similarity=0.170 Sum_probs=36.4
Q ss_pred EEEEEcCcchhHHHHHHHhcc--ccCCCCceEEEEEecCCCChh-hHHHHHcCCCEEEeeC
Q psy13615 13 VAVLISGTGTNLKSLLEATSN--RSDIMRAEIVLVVSNKHNVEG-LNIARNAGIPTKVSTY 70 (263)
Q Consensus 13 iavl~SG~Gsnl~al~~~~~~--~~~~l~~~iv~Visn~~~a~g-l~~A~~~gIP~~~v~~ 70 (263)
|+=+..-+|+..+.+.++... +...+..+-.+.+..+.+-++ ++.|+++|+|..+++.
T Consensus 3 V~GIGcrrg~~~~~i~~ai~~~l~~~~lsi~~iatid~K~dE~gl~~~a~~l~~pl~~~~~ 63 (123)
T d3by5a1 3 VAGIGCRKGAASDAIIAAVRAAERAFGVTVDYLATAPLKADEAGLAEAAKGLSLSLEIVAQ 63 (123)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHHTCCCCEEEESSCCSCCHHHHHHHHHTTCCEEECCH
T ss_pred EEEEccCCCCCHHHHHHHHHHHHHHcCCChhhcccHHHhcCCHHHHHHHHHhCCCeEEeCH
Confidence 444566667766666533221 111233455666766777777 7889999999999853
No 55
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=25.17 E-value=25 Score=28.43 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=39.1
Q ss_pred CccEEEEEcCcchhHHH--H---HHHhccccCCCCceEEEEEecCCCChhhHHHHH----cCCCEEEeeCCC
Q psy13615 10 RKRVAVLISGTGTNLKS--L---LEATSNRSDIMRAEIVLVVSNKHNVEGLNIARN----AGIPTKVSTYKH 72 (263)
Q Consensus 10 ~~riavl~SG~Gsnl~a--l---~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~----~gIP~~~v~~~~ 72 (263)
+..|-+++-|+|++|+- + .+.....-..+..|.+.++|-++.++|=..||+ .|||+.++....
T Consensus 29 Redi~vrv~gsGaKM~pe~~e~~~~~~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~giP~ivI~D~p 100 (282)
T d1u6ka1 29 REDVEFRVVGTSVKMDPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAP 100 (282)
T ss_dssp CSSEEEEEEECTTCCSHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGG
T ss_pred ccCceEEEeccccCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHHHHhcCCCEEEEcCCc
Confidence 34566666666666542 1 100000001124689999999999998777764 599999997654
No 56
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}
Probab=24.36 E-value=18 Score=26.45 Aligned_cols=47 Identities=13% Similarity=0.154 Sum_probs=28.7
Q ss_pred ccEEEEEcCc-chh-HHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCE
Q psy13615 11 KRVAVLISGT-GTN-LKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPT 65 (263)
Q Consensus 11 ~riavl~SG~-Gsn-l~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~ 65 (263)
+||++++.|. |+. ...++ .+.+ ..+++ ++++....+.+.|++++++.
T Consensus 2 irvgiiG~G~~~~~~~~~~l----~~~~--~~~~~--~~d~~~~~~~~~~~~~~~~~ 50 (167)
T d1xeaa1 2 LKIAMIGLGDIAQKAYLPVL----AQWP--DIELV--LCTRNPKVLGTLATRYRVSA 50 (167)
T ss_dssp EEEEEECCCHHHHHTHHHHH----TTST--TEEEE--EECSCHHHHHHHHHHTTCCC
T ss_pred eEEEEEcCCHHHHHHHHHHH----HhCC--CcEEE--EEECCHHHHHHHHHhccccc
Confidence 5899998886 543 23333 1222 24554 56655566677888898874
No 57
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=23.81 E-value=77 Score=24.45 Aligned_cols=68 Identities=12% Similarity=0.196 Sum_probs=32.5
Q ss_pred ccEEEEEcCcchhHHHHH-HHhccccCCCCceEEEEEecCCCChh---hHHHHHcCCCEEEeeCCCCCCHHHHHHHHHHh
Q psy13615 11 KRVAVLISGTGTNLKSLL-EATSNRSDIMRAEIVLVVSNKHNVEG---LNIARNAGIPTKVSTYKHTLILSNSLQVMQKV 86 (263)
Q Consensus 11 ~riavl~SG~Gsnl~al~-~~~~~~~~~l~~~iv~Visn~~~a~g---l~~A~~~gIP~~~v~~~~~~~~~~~~~i~~~l 86 (263)
|||| |++|.++.+-..+ ++.. +. +++|++ +++..... .+..++.|..+..+. -+..+.+..+++++.+
T Consensus 1 KKVa-lITGas~GIG~aia~~la-~~---Ga~V~~--~~r~~~~l~~~~~~i~~~g~~~~~~~-~Dv~~~~~v~~~~~~~ 72 (255)
T d1gega_ 1 KKVA-LVTGAGQGIGKAIALRLV-KD---GFAVAI--ADYNDATAKAVASEINQAGGHAVAVK-VDVSDRDQVFAAVEQA 72 (255)
T ss_dssp CCEE-EEETTTSHHHHHHHHHHH-HT---TCEEEE--EESCHHHHHHHHHHHHHTTCCEEEEE-CCTTSHHHHHHHHHHH
T ss_pred CCEE-EEcCCccHHHHHHHHHHH-HC---CCEEEE--EECCHHHHHHHHHHHHhcCCcEEEEE-eeCCCHHHHHHHHHHH
Confidence 5665 6677644443333 2221 22 467654 34322221 223355666665553 3445555556665555
No 58
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=23.02 E-value=65 Score=25.87 Aligned_cols=46 Identities=11% Similarity=0.020 Sum_probs=28.9
Q ss_pred ceEEEEEecCCCC------hhhHHHHHcCCCEE-EeeCCCCCCHHHHHHHHHHh
Q psy13615 40 AEIVLVVSNKHNV------EGLNIARNAGIPTK-VSTYKHTLILSNSLQVMQKV 86 (263)
Q Consensus 40 ~~iv~Visn~~~a------~gl~~A~~~gIP~~-~v~~~~~~~~~~~~~i~~~l 86 (263)
+|.++++.|-.+. ...+.|+++++|.. ++++.+....++ .++++.+
T Consensus 95 ~D~avlVvda~~Gv~~~T~~~w~~a~~~~lP~i~fINKmDr~~ad~-~~~l~ei 147 (276)
T d2bv3a2 95 LDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADL-WLVIRTM 147 (276)
T ss_dssp CCEEEEEEETTTSSCHHHHHHHHHHHTTTCCEEEEEECTTSTTCCH-HHHHHHH
T ss_pred hhheEEeccccCCcchhHHHHHHHHHHcCCCEEEEEeccccccccc-chhHHHH
Confidence 4666666664333 57889999999954 456666544333 4455555
No 59
>d1c4ka1 c.23.1.4 (A:1-107) Ornithine decarboxylase N-terminal "wing" domain {Lactobacillus sp., strain 30a [TaxId: 1591]}
Probab=21.19 E-value=45 Score=23.28 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=22.1
Q ss_pred eEEEEEecCCCChhhHHHHHc--CCCEEEeeCCC
Q psy13615 41 EIVLVVSNKHNVEGLNIARNA--GIPTKVSTYKH 72 (263)
Q Consensus 41 ~iv~Visn~~~a~gl~~A~~~--gIP~~~v~~~~ 72 (263)
||.+|+..+.+.+-++..++- +||+|++....
T Consensus 32 DVaAVVvsD~~~g~l~~i~~TgF~IPvFv~~~~~ 65 (107)
T d1c4ka1 32 DVGAVIAMDYETDVIDAADATKFGIPVFAVTKDA 65 (107)
T ss_dssp SEEEEEEETTCHHHHHHHHTTCSCCCEEEEESCS
T ss_pred ceEEEEEEcccccHHHHHHhcCCCCCEEEEecCC
Confidence 676666656666667777764 59999976443
No 60
>d2uubl1 b.40.4.5 (L:5-122) Ribosomal protein S12 {Thermus thermophilus [TaxId: 274]}
Probab=20.70 E-value=13 Score=26.80 Aligned_cols=24 Identities=38% Similarity=0.588 Sum_probs=21.6
Q ss_pred eeeeeccCCccEEEEEcCcchhHH
Q psy13615 2 VVKTRMVQRKRVAVLISGTGTNLK 25 (263)
Q Consensus 2 ~~~~~m~~~~riavl~SG~Gsnl~ 25 (263)
++++|.++.+.|..++-|.|+|||
T Consensus 51 varVrLsng~~v~AyIPG~Ghnlq 74 (118)
T d2uubl1 51 VAKVRLTSGYEVTAYIPGEGHNLQ 74 (118)
T ss_dssp EEEEEETTSCEEEEECCSSCCCCC
T ss_pred EEEEEecCCeEEEEEcCCCCcCcc
Confidence 578999999999999999999887
No 61
>d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus aureus [TaxId: 1280]}
Probab=20.16 E-value=51 Score=22.83 Aligned_cols=56 Identities=7% Similarity=0.072 Sum_probs=29.6
Q ss_pred CCccEEEEEcCc---chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEE
Q psy13615 9 QRKRVAVLISGT---GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTK 66 (263)
Q Consensus 9 ~~~riavl~SG~---Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~ 66 (263)
+++||.|+.+|+ .--.++++.+.. .+.+.+.=+.+-....+-.+++..+++||+..
T Consensus 1 ~k~~vlFvC~~N~cRS~mAEa~~~~~~--~~~~~v~SAG~~~~~v~p~ai~~l~e~Gid~~ 59 (130)
T d1jf8a_ 1 DKKTIYFISTGNSARSQMAEGWGKEIL--GEGWNVYSAGIETHGVNPKAIEAMKEVDIDIS 59 (130)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHS--TTTEEEEEEESSCCCCCHHHHHHHHHTTCCCT
T ss_pred CCCEEEEEeCCCcHHHHHHHHHHHhcC--CccceeccccccccccchhhhHHhhccccccc
Confidence 467898888887 333445553321 12222222222222334466788888888753
No 62
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}
Probab=20.08 E-value=63 Score=21.96 Aligned_cols=50 Identities=22% Similarity=0.233 Sum_probs=30.9
Q ss_pred ccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeC
Q psy13615 11 KRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTY 70 (263)
Q Consensus 11 ~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~ 70 (263)
||++|++.|+ |+.+-..+.+ . +.+++++ +. +-..++++++.+.++++-+.
T Consensus 1 k~~iIiG~G~~G~~la~~L~~----~---g~~vvvi--d~-d~~~~~~~~~~~~~~~~gd~ 51 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHR----M---GHEVLAV--DI-NEEKVNAYASYATHAVIANA 51 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHH----T---TCCCEEE--ES-CHHHHHHTTTTCSEEEECCT
T ss_pred CEEEEECCCHHHHHHHHHHHH----C---CCeEEEe--cC-cHHHHHHHHHhCCcceeeec
Confidence 5788887777 7766655522 1 2455433 22 44567788888988776543
No 63
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=20.08 E-value=1.4e+02 Score=20.93 Aligned_cols=52 Identities=19% Similarity=0.164 Sum_probs=28.7
Q ss_pred ccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEecCCCChhhHHHHHcCCCEEEeeCCC
Q psy13615 11 KRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSNKHNVEGLNIARNAGIPTKVSTYKH 72 (263)
Q Consensus 11 ~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn~~~a~gl~~A~~~gIP~~~v~~~~ 72 (263)
-+++|+++|. |...-.++. .. +++|+++-.| -.-++.|+++|....+.....
T Consensus 28 ~~vlV~G~G~vG~~~~~~ak----~~---Ga~vi~v~~~---~~r~~~a~~~ga~~~~~~~~~ 80 (170)
T d1e3ja2 28 TTVLVIGAGPIGLVSVLAAK----AY---GAFVVCTARS---PRRLEVAKNCGADVTLVVDPA 80 (170)
T ss_dssp CEEEEECCSHHHHHHHHHHH----HT---TCEEEEEESC---HHHHHHHHHTTCSEEEECCTT
T ss_pred CEEEEEcccccchhhHhhHh----hh---cccccccchH---HHHHHHHHHcCCcEEEecccc
Confidence 3567766554 443333331 11 3566554333 244889999998766654433
No 64
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}
Probab=20.05 E-value=29 Score=24.56 Aligned_cols=31 Identities=19% Similarity=0.141 Sum_probs=21.6
Q ss_pred ccEEEEEcCc-chhHHHHHHHhccccCCCCceEEEEEec
Q psy13615 11 KRVAVLISGT-GTNLKSLLEATSNRSDIMRAEIVLVVSN 48 (263)
Q Consensus 11 ~riavl~SG~-Gsnl~al~~~~~~~~~~l~~~iv~Visn 48 (263)
+||+|+..|. |+.+-..+.+ . +.+|.++.-+
T Consensus 1 MkI~IiGaG~iG~~~a~~L~~----~---G~~V~~~~r~ 32 (167)
T d1ks9a2 1 MKITVLGCGALGQLWLTALCK----Q---GHEVQGWLRV 32 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHHH----T---TCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHH----C---CCceEEEEcC
Confidence 4899999999 9888877722 1 3567655433
Done!