Query psy13629
Match_columns 395
No_of_seqs 324 out of 2365
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 16:08:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13629.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13629hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p5b_L Low density lipoprotein 100.0 2.6E-35 8.7E-40 293.5 32.3 247 81-350 63-318 (400)
2 3v64_C Agrin; beta propeller, 100.0 5.1E-35 1.7E-39 286.1 30.3 245 80-350 23-273 (349)
3 3s94_A LRP-6, low-density lipo 100.0 5.3E-35 1.8E-39 306.2 31.3 246 80-351 297-550 (619)
4 4a0p_A LRP6, LRP-6, low-densit 100.0 6.6E-35 2.2E-39 305.9 31.3 244 81-351 290-548 (628)
5 3sov_A LRP-6, low-density lipo 100.0 2.2E-34 7.6E-39 278.2 27.9 228 99-350 2-236 (318)
6 3v65_B Low-density lipoprotein 100.0 6.1E-34 2.1E-38 282.2 30.6 244 81-350 67-316 (386)
7 3m0c_C LDL receptor, low-densi 100.0 4.8E-34 1.7E-38 305.4 31.4 246 82-350 376-630 (791)
8 4a0p_A LRP6, LRP-6, low-densit 100.0 1.3E-33 4.4E-38 296.1 32.0 227 99-351 4-236 (628)
9 3s94_A LRP-6, low-density lipo 100.0 2.1E-33 7.2E-38 294.1 28.7 220 108-351 18-242 (619)
10 1ijq_A LDL receptor, low-densi 100.0 3.8E-32 1.3E-36 261.9 30.8 220 108-350 10-236 (316)
11 1n7d_A LDL receptor, low-densi 100.0 2.1E-30 7.3E-35 275.1 15.4 228 81-311 357-593 (699)
12 3v64_C Agrin; beta propeller, 100.0 9.8E-28 3.4E-32 234.4 26.7 197 109-313 96-297 (349)
13 3sov_A LRP-6, low-density lipo 100.0 4.4E-27 1.5E-31 227.1 27.0 198 109-314 58-261 (318)
14 3m0c_C LDL receptor, low-densi 100.0 4E-27 1.4E-31 252.0 28.0 199 109-315 447-656 (791)
15 3p5b_L Low density lipoprotein 100.0 1.3E-26 4.3E-31 230.7 28.5 198 109-314 135-343 (400)
16 3v65_B Low-density lipoprotein 100.0 5.1E-27 1.7E-31 232.4 25.3 197 109-313 139-340 (386)
17 1npe_A Nidogen, entactin; glyc 99.9 1.4E-25 4.9E-30 209.5 28.9 188 108-300 10-203 (267)
18 1ijq_A LDL receptor, low-densi 99.9 1.2E-25 4.1E-30 216.4 28.4 198 109-314 53-261 (316)
19 1npe_A Nidogen, entactin; glyc 99.9 1.2E-22 4E-27 189.7 28.2 199 109-316 59-264 (267)
20 2fu0_A Cyclophilin, putative; 99.9 6.7E-26 2.3E-30 196.0 4.9 102 294-395 5-106 (160)
21 2x7k_A Peptidyl-prolyl CIS-tra 99.9 1.6E-25 5.3E-30 194.9 5.1 98 298-395 15-112 (166)
22 2ok3_A Peptidyl-prolyl CIS-tra 99.9 1.6E-25 5.3E-30 194.2 5.0 97 299-395 5-101 (161)
23 1zkc_A Peptidyl-prolyl CIS-tra 99.9 3.1E-25 1E-29 197.3 6.2 100 296-395 21-120 (197)
24 1n7d_A LDL receptor, low-densi 99.9 2.1E-24 7E-29 229.1 13.3 199 108-314 428-637 (699)
25 2b71_A Cyclophilin-like protei 99.9 4.3E-25 1.5E-29 196.4 5.8 98 298-395 42-139 (196)
26 2a2n_A Peptidylprolyl isomeras 99.9 3.9E-25 1.3E-29 193.9 5.4 98 298-395 25-122 (176)
27 2hq6_A Serologically defined c 99.9 4.5E-25 1.5E-29 194.9 5.3 99 297-395 27-125 (185)
28 2poe_A Cyclophilin-like protei 99.9 7.4E-25 2.5E-29 193.6 5.5 98 298-395 20-121 (185)
29 2k7n_A Peptidyl-prolyl CIS-tra 99.9 1.5E-24 5.2E-29 193.6 5.7 98 298-395 15-112 (203)
30 3bo7_A Peptidyl-prolyl CIS-tra 99.9 1.6E-24 5.6E-29 194.2 5.4 101 295-395 7-119 (201)
31 3bkp_A Cyclophilin; malaria, i 99.9 7.2E-24 2.5E-28 193.3 6.0 101 295-395 22-138 (232)
32 2z6w_A Peptidyl-prolyl CIS-tra 99.9 9E-24 3.1E-28 183.7 6.1 94 301-395 15-112 (165)
33 1w74_A Peptidyl-prolyl CIS-tra 99.9 1.1E-23 3.6E-28 186.9 6.7 95 298-395 27-136 (191)
34 2cmt_A Peptidyl-prolyl CIS-tra 99.9 1.2E-23 4.1E-28 183.9 6.1 94 301-395 22-119 (172)
35 2r99_A Peptidyl-prolyl CIS-tra 99.9 1.5E-23 5.1E-28 183.6 6.4 94 301-395 23-120 (173)
36 1mzw_A Cyclophilin H, U-snRNP- 99.9 1.2E-23 4E-28 184.9 5.2 94 301-395 22-124 (177)
37 2haq_A Cyclophilin; rotamase, 99.9 1.2E-23 4.2E-28 183.6 5.2 93 301-395 23-119 (172)
38 1a58_A Cyclophilin; isomerase, 99.9 2E-23 6.7E-28 183.6 6.5 94 301-395 18-123 (177)
39 2wfi_A Peptidyl-prolyl CIS-tra 99.9 1.9E-23 6.4E-28 184.0 6.4 94 301-395 21-126 (179)
40 2igv_A Peptidyl-prolyl CIS-tra 99.9 1.3E-23 4.6E-28 184.0 5.0 94 301-395 15-119 (173)
41 2he9_A NK-tumor recognition pr 99.9 2.6E-23 8.9E-28 184.7 6.5 94 301-395 31-136 (192)
42 1qng_A Peptidyl-prolyl CIS-tra 99.9 1.5E-23 5E-28 183.3 4.8 94 301-395 15-118 (170)
43 3ich_A Peptidyl-prolyl CIS-tra 99.9 1.8E-23 6.2E-28 185.2 5.1 94 301-395 27-124 (188)
44 3pmp_A Cyclophilin A; peptidyl 99.9 3.1E-23 1E-27 180.4 6.2 94 301-395 14-111 (164)
45 2poy_A Peptidyl-prolyl CIS-tra 99.9 4.4E-23 1.5E-27 182.3 5.4 94 301-395 31-135 (186)
46 1z81_A Cyclophilin; structural 99.9 5.9E-23 2E-27 186.4 5.7 94 301-395 71-173 (229)
47 2c3b_A Ppiase, cyclophilin; is 99.9 6.4E-24 2.2E-28 185.8 -1.1 97 298-395 16-116 (172)
48 3s25_A Hypothetical 7-bladed b 99.9 1.3E-20 4.3E-25 180.4 20.9 200 107-350 87-291 (302)
49 4fru_A Cyclophilin B, peptidyl 99.9 1.5E-22 5.2E-27 179.3 5.0 94 301-395 24-121 (185)
50 1lop_A Cyclophilin A; rotamase 99.9 1.1E-22 3.9E-27 176.8 3.6 94 299-395 4-98 (164)
51 3k2c_A Peptidyl-prolyl CIS-tra 99.9 3.6E-22 1.2E-26 177.6 6.3 94 301-395 39-136 (193)
52 1v9t_A Cyclophilin B; beta bar 99.8 3.2E-22 1.1E-26 174.3 5.0 94 299-395 9-103 (166)
53 3rdd_A Peptidyl-prolyl CIS-tra 99.8 4.2E-22 1.4E-26 176.0 4.8 94 301-395 34-131 (184)
54 1ihg_A Cyclophilin 40; ppiase 99.8 1.1E-21 3.9E-26 192.9 6.1 94 301-395 27-132 (370)
55 3s6m_A Peptidyl-prolyl CIS-tra 99.8 4E-22 1.4E-26 174.1 2.3 95 298-395 7-102 (167)
56 2ose_A Probable peptidyl-proly 99.8 2.6E-21 9E-26 176.8 3.8 92 301-395 26-147 (234)
57 3rfy_A Peptidyl-prolyl CIS-tra 99.8 8.8E-21 3E-25 182.7 2.0 93 302-395 186-305 (369)
58 3tc9_A Hypothetical hydrolase; 99.7 8.4E-16 2.9E-20 154.0 28.1 188 108-300 159-376 (430)
59 4hw6_A Hypothetical protein, I 99.7 7.7E-16 2.6E-20 154.4 24.5 186 108-300 162-379 (433)
60 3s25_A Hypothetical 7-bladed b 99.7 2.4E-16 8.4E-21 150.6 17.8 169 108-300 129-298 (302)
61 3tc9_A Hypothetical hydrolase; 99.7 7E-16 2.4E-20 154.5 19.1 160 127-296 135-302 (430)
62 3hrp_A Uncharacterized protein 99.7 1.9E-14 6.5E-19 143.1 27.0 180 108-298 152-358 (409)
63 3hrp_A Uncharacterized protein 99.6 2.2E-14 7.6E-19 142.6 24.1 174 109-293 195-408 (409)
64 3fvz_A Peptidyl-glycine alpha- 99.6 1.1E-14 3.6E-19 139.9 20.7 181 109-296 70-323 (329)
65 3fvz_A Peptidyl-glycine alpha- 99.6 8.6E-15 2.9E-19 140.5 19.4 168 127-300 22-233 (329)
66 4hw6_A Hypothetical protein, I 99.6 1.9E-14 6.3E-19 144.3 20.5 162 127-294 226-432 (433)
67 3kya_A Putative phosphatase; s 99.6 3.1E-14 1.1E-18 144.1 20.8 170 127-300 245-480 (496)
68 1rwi_B Serine/threonine-protei 99.6 2.4E-14 8.2E-19 132.0 18.4 180 109-299 88-268 (270)
69 3kya_A Putative phosphatase; s 99.6 1.7E-13 5.9E-18 138.6 24.1 189 108-300 162-415 (496)
70 1rwi_B Serine/threonine-protei 99.6 6.3E-14 2.2E-18 129.1 17.6 180 109-300 47-227 (270)
71 1q7f_A NHL, brain tumor CG1071 99.5 1.7E-12 5.8E-17 121.0 24.0 182 109-300 52-243 (286)
72 2fp8_A Strictosidine synthase; 99.5 7.6E-13 2.6E-17 126.4 20.2 162 129-299 80-273 (322)
73 2fp8_A Strictosidine synthase; 99.5 1.5E-12 5.3E-17 124.2 17.3 162 127-296 17-217 (322)
74 3dr2_A Exported gluconolactona 99.5 6.5E-12 2.2E-16 118.9 20.9 167 119-297 35-226 (305)
75 1q7f_A NHL, brain tumor CG1071 99.4 6.2E-12 2.1E-16 117.1 20.4 165 127-300 28-199 (286)
76 3dsm_A Uncharacterized protein 99.4 1.4E-11 4.6E-16 118.3 22.3 180 109-300 106-307 (328)
77 2qc5_A Streptogramin B lactona 99.4 1.9E-11 6.5E-16 113.5 21.9 178 109-298 84-263 (300)
78 2qc5_A Streptogramin B lactona 99.4 2.1E-11 7.3E-16 113.2 21.4 172 109-294 126-299 (300)
79 2p4o_A Hypothetical protein; p 99.4 2E-11 6.8E-16 115.9 21.5 177 109-298 54-245 (306)
80 3g4e_A Regucalcin; six bladed 99.4 1.5E-11 5.2E-16 116.0 19.6 179 109-300 36-235 (297)
81 3g4e_A Regucalcin; six bladed 99.4 3.5E-11 1.2E-15 113.5 21.3 158 124-294 8-179 (297)
82 3e5z_A Putative gluconolactona 99.4 3.5E-11 1.2E-15 112.8 21.0 163 119-294 18-201 (296)
83 2z2n_A Virginiamycin B lyase; 99.4 5.1E-11 1.7E-15 110.5 21.7 176 109-296 79-256 (299)
84 3e5z_A Putative gluconolactona 99.4 1E-10 3.6E-15 109.5 23.4 177 109-300 51-251 (296)
85 2z2n_A Virginiamycin B lyase; 99.4 1E-10 3.6E-15 108.4 23.1 177 109-297 37-215 (299)
86 2qe8_A Uncharacterized protein 99.4 4.9E-11 1.7E-15 115.1 20.2 166 127-298 65-282 (343)
87 3dsm_A Uncharacterized protein 99.3 2.3E-10 7.8E-15 109.7 24.3 177 109-297 65-255 (328)
88 3a9g_A Putative uncharacterize 99.3 3.5E-11 1.2E-15 117.3 17.8 159 120-287 20-220 (354)
89 2ism_A Putative oxidoreductase 99.3 5E-11 1.7E-15 116.0 18.4 161 119-287 21-225 (352)
90 3dr2_A Exported gluconolactona 99.3 1.3E-10 4.3E-15 110.0 20.8 179 109-300 68-272 (305)
91 3vgz_A Uncharacterized protein 99.3 1E-09 3.5E-14 104.2 26.2 183 109-298 70-265 (353)
92 3sre_A PON1, serum paraoxonase 99.3 4.9E-10 1.7E-14 109.0 22.3 179 109-294 84-297 (355)
93 2p4o_A Hypothetical protein; p 99.3 2.6E-10 9E-15 108.1 19.2 154 129-295 32-198 (306)
94 2dg1_A DRP35, lactonase; beta 99.2 8.4E-10 2.9E-14 104.7 21.9 163 123-294 39-212 (333)
95 2iwa_A Glutamine cyclotransfer 99.2 1.4E-09 4.8E-14 101.6 22.7 178 108-297 44-239 (266)
96 3vgz_A Uncharacterized protein 99.2 1E-08 3.5E-13 97.2 28.9 182 109-299 112-307 (353)
97 3u4y_A Uncharacterized protein 99.2 4.5E-09 1.6E-13 99.1 25.4 183 109-297 21-209 (331)
98 2ism_A Putative oxidoreductase 99.2 5.4E-10 1.9E-14 108.6 18.4 185 109-297 52-299 (352)
99 3hfq_A Uncharacterized protein 99.2 5.5E-09 1.9E-13 99.6 24.4 163 130-294 142-316 (347)
100 2g8s_A Glucose/sorbosone dehyd 99.2 3.1E-10 1E-14 110.5 15.1 165 119-285 8-218 (353)
101 2dg1_A DRP35, lactonase; beta 99.2 3.3E-09 1.1E-13 100.5 21.7 182 109-299 67-267 (333)
102 3u4y_A Uncharacterized protein 99.2 8.4E-09 2.9E-13 97.3 24.4 180 109-298 63-255 (331)
103 2qe8_A Uncharacterized protein 99.2 1.2E-09 4.2E-14 105.2 18.8 172 109-290 94-316 (343)
104 2iwa_A Glutamine cyclotransfer 99.2 8.8E-09 3E-13 96.1 23.5 160 130-300 22-186 (266)
105 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 2.4E-09 8.3E-14 100.3 19.8 178 109-297 47-259 (314)
106 1l0q_A Surface layer protein; 99.1 3.6E-08 1.2E-12 95.1 26.9 180 109-298 13-192 (391)
107 3a9g_A Putative uncharacterize 99.1 5.3E-09 1.8E-13 101.7 20.7 184 109-296 50-297 (354)
108 1jof_A Carboxy-CIS,CIS-muconat 99.1 1.5E-08 5.2E-13 98.0 23.4 188 109-296 120-342 (365)
109 3scy_A Hypothetical bacterial 99.1 3.4E-08 1.2E-12 94.7 25.7 165 129-294 155-336 (361)
110 3qqz_A Putative uncharacterize 99.1 5.3E-08 1.8E-12 90.3 25.9 167 128-300 26-209 (255)
111 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 2.3E-09 8E-14 100.4 17.0 163 121-294 10-206 (314)
112 1l0q_A Surface layer protein; 99.1 5.8E-08 2E-12 93.7 27.1 181 109-299 55-237 (391)
113 1ri6_A Putative isomerase YBHE 99.1 1.3E-08 4.5E-13 95.7 21.4 184 109-295 16-209 (343)
114 3hfq_A Uncharacterized protein 99.1 3.1E-08 1.1E-12 94.3 24.2 183 109-294 64-270 (347)
115 2ghs_A AGR_C_1268P; regucalcin 99.1 1.7E-08 5.9E-13 96.4 21.3 154 127-294 47-209 (326)
116 3qqz_A Putative uncharacterize 99.1 1.1E-07 3.8E-12 88.1 25.9 183 109-295 50-253 (255)
117 1ri6_A Putative isomerase YBHE 99.1 2.6E-08 8.8E-13 93.7 22.1 185 109-294 107-307 (343)
118 3das_A Putative oxidoreductase 99.1 7E-09 2.4E-13 100.5 18.4 159 120-286 23-223 (347)
119 1cru_A Protein (soluble quinop 99.0 7.9E-09 2.7E-13 104.0 19.0 161 119-285 17-248 (454)
120 3nok_A Glutaminyl cyclase; bet 99.0 5.8E-08 2E-12 90.0 22.9 180 131-328 57-245 (268)
121 2p9w_A MAL S 1 allergenic prot 99.0 1E-08 3.5E-13 98.1 18.3 158 129-294 13-214 (334)
122 3nol_A Glutamine cyclotransfer 99.0 6.8E-08 2.3E-12 89.5 22.3 173 108-294 65-255 (262)
123 3mbr_X Glutamine cyclotransfer 99.0 1.2E-07 4.1E-12 87.0 22.4 173 108-294 43-234 (243)
124 3mbr_X Glutamine cyclotransfer 99.0 2E-07 6.8E-12 85.5 23.8 181 131-328 23-214 (243)
125 2ghs_A AGR_C_1268P; regucalcin 99.0 8.1E-08 2.8E-12 91.7 22.0 176 109-298 72-263 (326)
126 3c75_H MADH, methylamine dehyd 99.0 3.7E-08 1.3E-12 98.1 19.9 198 108-312 99-422 (426)
127 3nol_A Glutamine cyclotransfer 99.0 1.8E-07 6.1E-12 86.6 22.9 181 131-328 45-235 (262)
128 2g8s_A Glucose/sorbosone dehyd 98.9 4.6E-08 1.6E-12 95.0 18.4 169 127-296 64-309 (353)
129 2p9w_A MAL S 1 allergenic prot 98.9 6.7E-08 2.3E-12 92.4 18.9 182 108-295 35-265 (334)
130 3bws_A Protein LP49; two-domai 98.9 6.9E-07 2.3E-11 87.3 26.0 180 109-297 192-392 (433)
131 1nir_A Nitrite reductase; hemo 98.9 5E-07 1.7E-11 92.7 25.4 184 109-299 160-359 (543)
132 3bws_A Protein LP49; two-domai 98.9 4E-07 1.4E-11 89.0 23.6 178 109-295 235-432 (433)
133 3nok_A Glutaminyl cyclase; bet 98.9 1.9E-07 6.5E-12 86.6 19.6 173 109-293 76-264 (268)
134 3scy_A Hypothetical bacterial 98.9 1.4E-06 5E-11 83.2 26.6 163 127-294 98-290 (361)
135 1pby_B Quinohemoprotein amine 98.9 1.1E-06 3.7E-11 82.2 24.9 133 109-249 12-162 (337)
136 3sre_A PON1, serum paraoxonase 98.8 3.3E-07 1.1E-11 89.0 20.6 140 149-295 81-252 (355)
137 2mad_H Methylamine dehydrogena 98.8 1.3E-06 4.5E-11 85.3 23.5 184 109-300 48-355 (373)
138 3das_A Putative oxidoreductase 98.8 8.8E-07 3E-11 85.7 20.9 167 126-297 77-294 (347)
139 1mda_H Methylamine dehydrogena 98.7 6.1E-07 2.1E-11 87.6 19.1 185 109-300 47-351 (368)
140 1qks_A Cytochrome CD1 nitrite 98.7 2.5E-06 8.7E-11 88.0 24.6 184 108-298 177-376 (567)
141 1jof_A Carboxy-CIS,CIS-muconat 98.7 9.8E-07 3.4E-11 85.1 18.7 161 127-294 38-223 (365)
142 2ece_A 462AA long hypothetical 98.6 2.4E-06 8.3E-11 84.9 20.7 169 109-282 165-399 (462)
143 2oiz_A Aromatic amine dehydrog 98.6 2.7E-06 9.3E-11 82.4 20.5 178 109-296 32-335 (361)
144 1jmx_B Amine dehydrogenase; ox 98.6 6.9E-06 2.4E-10 77.1 21.2 132 109-250 22-175 (349)
145 3amr_A 3-phytase; beta-propell 98.6 1.4E-05 4.9E-10 76.9 23.4 183 109-298 51-266 (355)
146 1fwx_A Nitrous oxide reductase 98.5 1.6E-06 5.3E-11 89.0 16.8 179 109-295 113-361 (595)
147 1nir_A Nitrite reductase; hemo 98.5 1.7E-05 5.9E-10 81.2 23.8 190 99-295 185-402 (543)
148 1pby_B Quinohemoprotein amine 98.5 1.5E-05 5E-10 74.4 21.0 149 142-298 2-166 (337)
149 2hqs_A Protein TOLB; TOLB, PAL 98.5 2E-05 6.8E-10 77.6 23.0 182 109-300 204-392 (415)
150 2hqs_A Protein TOLB; TOLB, PAL 98.5 3.6E-05 1.2E-09 75.7 23.9 183 108-299 159-348 (415)
151 1fwx_A Nitrous oxide reductase 98.4 5.1E-06 1.7E-10 85.2 16.8 152 139-296 100-309 (595)
152 2mad_H Methylamine dehydrogena 98.4 2.1E-05 7.2E-10 76.7 20.4 146 138-294 30-195 (373)
153 3c75_H MADH, methylamine dehyd 98.4 5E-06 1.7E-10 82.6 16.1 108 138-250 82-209 (426)
154 1cru_A Protein (soluble quinop 98.4 6.2E-06 2.1E-10 82.7 16.7 114 167-282 19-161 (454)
155 1jmx_B Amine dehydrogenase; ox 98.4 2.2E-05 7.4E-10 73.7 19.3 158 133-297 4-177 (349)
156 2ece_A 462AA long hypothetical 98.4 2.2E-05 7.5E-10 78.1 19.5 131 105-236 225-399 (462)
157 2ojh_A Uncharacterized protein 98.4 6.3E-05 2.1E-09 68.2 21.1 181 108-299 22-210 (297)
158 2wg3_C Hedgehog-interacting pr 98.3 7.5E-06 2.6E-10 82.3 15.3 162 119-283 4-242 (463)
159 3sjl_D Methylamine dehydrogena 98.3 9.2E-06 3.1E-10 79.6 13.5 116 183-300 41-174 (386)
160 2ojh_A Uncharacterized protein 98.2 0.00022 7.5E-09 64.5 20.9 180 109-297 63-260 (297)
161 1qks_A Cytochrome CD1 nitrite 98.2 0.00044 1.5E-08 71.2 24.9 192 99-295 203-421 (567)
162 1mda_H Methylamine dehydrogena 98.2 8.8E-06 3E-10 79.4 11.4 142 140-295 31-194 (368)
163 3sjl_D Methylamine dehydrogena 98.2 4.7E-05 1.6E-09 74.5 16.3 111 135-250 39-169 (386)
164 3no2_A Uncharacterized protein 98.2 0.00036 1.2E-08 64.8 21.7 177 109-298 57-256 (276)
165 3no2_A Uncharacterized protein 98.2 0.00024 8.2E-09 66.0 20.3 179 108-300 15-201 (276)
166 2oiz_A Aromatic amine dehydrog 98.1 7.9E-05 2.7E-09 72.0 16.1 107 139-250 14-140 (361)
167 3q6k_A 43.2 kDa salivary prote 98.0 0.0014 4.8E-08 63.8 23.5 154 129-286 152-345 (381)
168 3q6k_A 43.2 kDa salivary prote 98.0 0.0012 4.1E-08 64.3 22.0 120 175-295 152-306 (381)
169 1gxr_A ESG1, transducin-like e 98.0 0.0044 1.5E-07 57.1 25.1 178 109-298 120-299 (337)
170 4aez_A CDC20, WD repeat-contai 97.9 0.004 1.4E-07 60.1 25.1 183 109-297 197-382 (401)
171 4gqb_B Methylosome protein 50; 97.9 0.00092 3.1E-08 63.9 19.5 174 109-288 150-324 (344)
172 3azo_A Aminopeptidase; POP fam 97.9 0.00048 1.6E-08 71.2 18.3 185 109-298 103-328 (662)
173 2aq5_A Coronin-1A; WD40 repeat 97.9 0.0023 7.7E-08 61.7 22.0 185 109-297 105-301 (402)
174 4gqb_B Methylosome protein 50; 97.9 0.0029 9.8E-08 60.4 22.3 182 109-297 104-291 (344)
175 1gxr_A ESG1, transducin-like e 97.8 0.0099 3.4E-07 54.7 24.9 182 109-299 73-259 (337)
176 2xyi_A Probable histone-bindin 97.8 0.0017 5.9E-08 63.6 20.5 187 109-296 205-411 (430)
177 1r5m_A SIR4-interacting protei 97.8 0.0037 1.3E-07 59.6 22.4 176 109-295 228-425 (425)
178 3ow8_A WD repeat-containing pr 97.8 0.0069 2.4E-07 56.8 23.4 178 109-296 103-280 (321)
179 3pe7_A Oligogalacturonate lyas 97.8 0.0017 5.8E-08 61.9 19.0 183 109-299 61-277 (388)
180 3pe7_A Oligogalacturonate lyas 97.8 0.00048 1.7E-08 65.7 15.1 181 108-294 168-383 (388)
181 3azo_A Aminopeptidase; POP fam 97.8 0.0014 4.8E-08 67.7 19.5 183 109-298 162-372 (662)
182 2xyi_A Probable histone-bindin 97.7 0.0013 4.5E-08 64.4 18.4 185 109-295 152-353 (430)
183 3ow8_A WD repeat-containing pr 97.7 0.015 5E-07 54.6 24.7 164 109-281 145-308 (321)
184 3o4h_A Acylamino-acid-releasin 97.7 0.0011 3.7E-08 67.6 18.0 176 110-299 46-231 (582)
185 3amr_A 3-phytase; beta-propell 97.7 0.0016 5.3E-08 62.7 17.7 146 139-294 39-209 (355)
186 2ecf_A Dipeptidyl peptidase IV 97.7 0.0011 3.7E-08 69.5 18.1 144 128-282 36-227 (741)
187 3o4h_A Acylamino-acid-releasin 97.7 0.0012 4.1E-08 67.3 17.3 167 109-289 91-270 (582)
188 2ecf_A Dipeptidyl peptidase IV 97.7 0.0016 5.4E-08 68.2 18.5 190 98-296 157-416 (741)
189 3c5m_A Oligogalacturonate lyas 97.7 0.0036 1.2E-07 59.5 19.5 184 108-300 168-389 (396)
190 2z3z_A Dipeptidyl aminopeptida 97.7 0.0018 6.2E-08 67.4 18.7 161 131-297 183-393 (706)
191 4g56_B MGC81050 protein; prote 97.6 0.0016 5.6E-08 62.2 16.6 179 109-293 162-341 (357)
192 2ymu_A WD-40 repeat protein; u 97.6 0.021 7.2E-07 57.3 25.5 176 109-298 367-542 (577)
193 4aez_A CDC20, WD repeat-contai 97.6 0.024 8.4E-07 54.4 25.0 179 109-298 114-296 (401)
194 3ei3_B DNA damage-binding prot 97.6 0.018 6.2E-07 54.6 23.4 182 109-297 97-284 (383)
195 2pm9_A Protein WEB1, protein t 97.6 0.0019 6.3E-08 62.0 16.1 182 109-296 137-338 (416)
196 4ery_A WD repeat-containing pr 97.6 0.045 1.5E-06 50.3 25.1 180 109-297 46-225 (312)
197 2vdu_B TRNA (guanine-N(7)-)-me 97.5 0.0096 3.3E-07 58.4 21.0 160 130-297 104-273 (450)
198 2gop_A Trilobed protease; beta 97.5 0.01 3.5E-07 55.5 20.2 169 105-296 40-253 (347)
199 2ymu_A WD-40 repeat protein; u 97.5 0.028 9.7E-07 56.3 24.6 178 109-300 326-503 (577)
200 3c5m_A Oligogalacturonate lyas 97.5 0.0006 2.1E-08 65.0 11.5 182 109-298 61-276 (396)
201 4a9v_A PHOX; hydrolase, beta-p 97.5 0.00091 3.1E-08 68.1 13.0 111 127-238 382-551 (592)
202 2pm9_A Protein WEB1, protein t 97.5 0.0023 7.8E-08 61.3 15.5 190 109-298 90-297 (416)
203 2aq5_A Coronin-1A; WD40 repeat 97.5 0.018 6.3E-07 55.2 21.9 184 109-296 58-255 (402)
204 3ei3_B DNA damage-binding prot 97.5 0.016 5.6E-07 54.9 21.1 162 126-295 71-236 (383)
205 4g56_B MGC81050 protein; prote 97.4 0.004 1.4E-07 59.5 16.6 183 109-298 116-304 (357)
206 4a9v_A PHOX; hydrolase, beta-p 97.4 0.0015 5.3E-08 66.4 13.2 107 174-283 383-550 (592)
207 2z3z_A Dipeptidyl aminopeptida 97.4 0.0085 2.9E-07 62.2 19.3 183 109-298 102-347 (706)
208 1k8k_C P40, ARP2/3 complex 41 97.4 0.039 1.3E-06 51.6 22.2 182 109-297 31-235 (372)
209 3zwl_B Eukaryotic translation 97.4 0.063 2.2E-06 49.7 23.5 157 130-294 177-345 (369)
210 1k32_A Tricorn protease; prote 97.3 0.0068 2.3E-07 66.5 19.0 164 109-283 318-491 (1045)
211 2ynn_A Coatomer subunit beta'; 97.3 0.092 3.1E-06 48.3 24.4 183 109-298 36-220 (304)
212 3mkq_A Coatomer beta'-subunit; 97.3 0.072 2.5E-06 55.9 26.2 179 109-295 36-217 (814)
213 4ery_A WD repeat-containing pr 97.3 0.072 2.5E-06 48.8 23.4 160 127-296 22-181 (312)
214 3mkq_A Coatomer beta'-subunit; 97.3 0.049 1.7E-06 57.1 24.6 179 109-295 78-259 (814)
215 1vyh_C Platelet-activating fac 97.3 0.047 1.6E-06 52.9 22.5 179 109-296 173-370 (410)
216 1k32_A Tricorn protease; prote 97.3 0.029 9.8E-07 61.5 23.0 123 109-237 359-491 (1045)
217 1got_B GT-beta; complex (GTP-b 97.2 0.085 2.9E-06 49.4 23.2 163 109-280 165-329 (340)
218 2vdu_B TRNA (guanine-N(7)-)-me 97.2 0.069 2.4E-06 52.2 23.3 164 109-281 172-370 (450)
219 3vl1_A 26S proteasome regulato 97.2 0.021 7.3E-07 54.6 19.3 179 109-296 120-323 (420)
220 1r5m_A SIR4-interacting protei 97.2 0.048 1.6E-06 51.7 21.6 178 109-299 131-323 (425)
221 3frx_A Guanine nucleotide-bind 97.2 0.13 4.4E-06 47.7 25.4 175 109-295 88-267 (319)
222 1sq9_A Antiviral protein SKI8; 97.2 0.039 1.3E-06 52.3 20.5 116 127-250 185-322 (397)
223 2ynn_A Coatomer subunit beta'; 97.2 0.13 4.5E-06 47.2 26.4 180 109-295 78-259 (304)
224 1vyh_C Platelet-activating fac 97.2 0.12 4E-06 50.0 24.2 157 109-274 131-287 (410)
225 1k8k_C P40, ARP2/3 complex 41 97.2 0.057 2E-06 50.4 21.3 179 109-295 75-274 (372)
226 3zwl_B Eukaryotic translation 97.2 0.15 5.1E-06 47.2 25.9 170 109-285 97-281 (369)
227 4e54_B DNA damage-binding prot 97.2 0.0096 3.3E-07 58.2 16.1 161 127-294 118-281 (435)
228 3iz6_a 40S ribosomal protein R 97.1 0.12 3.9E-06 49.4 22.8 180 109-296 181-376 (380)
229 1sq9_A Antiviral protein SKI8; 97.1 0.11 3.7E-06 49.1 22.4 182 109-296 92-323 (397)
230 1erj_A Transcriptional repress 97.1 0.16 5.4E-06 48.6 23.8 155 131-294 126-286 (393)
231 2pbi_B Guanine nucleotide-bind 97.1 0.15 5.1E-06 48.2 23.1 166 109-282 177-345 (354)
232 1pgu_A Actin interacting prote 97.1 0.19 6.6E-06 50.3 25.2 179 109-295 40-238 (615)
233 2xdw_A Prolyl endopeptidase; a 97.0 0.067 2.3E-06 55.9 22.0 182 109-296 152-370 (710)
234 1erj_A Transcriptional repress 97.0 0.17 5.7E-06 48.5 23.4 179 109-295 146-341 (393)
235 1xfd_A DIP, dipeptidyl aminope 97.0 0.033 1.1E-06 57.8 19.3 122 109-236 38-191 (723)
236 2wg3_C Hedgehog-interacting pr 97.0 0.0077 2.6E-07 60.3 13.8 135 109-247 178-370 (463)
237 3jrp_A Fusion protein of prote 97.0 0.13 4.6E-06 47.7 21.9 181 109-294 80-286 (379)
238 3jrp_A Fusion protein of prote 97.0 0.12 3.9E-06 48.2 21.1 184 109-296 34-241 (379)
239 3i2n_A WD repeat-containing pr 96.9 0.071 2.4E-06 49.3 19.1 178 109-293 140-351 (357)
240 4a11_B DNA excision repair pro 96.9 0.026 8.7E-07 53.4 16.2 167 123-295 38-218 (408)
241 1xfd_A DIP, dipeptidyl aminope 96.9 0.016 5.4E-07 60.2 15.8 171 109-283 229-429 (723)
242 2xdw_A Prolyl endopeptidase; a 96.9 0.11 3.9E-06 54.1 22.0 161 130-296 126-321 (710)
243 3vl1_A 26S proteasome regulato 96.9 0.29 9.8E-06 46.6 23.3 177 109-294 162-364 (420)
244 4e54_B DNA damage-binding prot 96.8 0.041 1.4E-06 53.6 17.3 179 109-294 143-326 (435)
245 3odt_A Protein DOA1; ubiquitin 96.8 0.24 8.3E-06 44.6 21.3 171 109-296 125-297 (313)
246 3hxj_A Pyrrolo-quinoline quino 96.8 0.11 3.8E-06 47.8 19.2 170 109-298 118-287 (330)
247 4a11_B DNA excision repair pro 96.8 0.072 2.5E-06 50.2 18.3 164 127-296 98-277 (408)
248 3odt_A Protein DOA1; ubiquitin 96.8 0.28 9.5E-06 44.2 22.1 177 109-298 40-217 (313)
249 2gop_A Trilobed protease; beta 96.8 0.066 2.3E-06 49.8 17.6 135 129-281 15-187 (347)
250 3fm0_A Protein CIAO1; WDR39,SG 96.7 0.21 7.1E-06 46.8 20.8 167 109-282 39-213 (345)
251 3k26_A Polycomb protein EED; W 96.7 0.27 9.1E-06 45.4 21.2 161 127-295 17-192 (366)
252 2bkl_A Prolyl endopeptidase; m 96.7 0.2 6.8E-06 52.1 21.9 180 108-297 147-353 (695)
253 3k26_A Polycomb protein EED; W 96.7 0.1 3.5E-06 48.3 17.8 137 109-250 45-192 (366)
254 3i2n_A WD repeat-containing pr 96.6 0.16 5.5E-06 46.8 18.9 180 109-294 91-290 (357)
255 3iuj_A Prolyl endopeptidase; h 96.6 0.12 4.1E-06 53.9 19.8 181 109-297 209-407 (693)
256 1yfq_A Cell cycle arrest prote 96.6 0.065 2.2E-06 49.4 16.0 174 109-295 34-225 (342)
257 3lrv_A PRE-mRNA-splicing facto 96.6 0.34 1.2E-05 45.1 20.9 161 126-295 123-292 (343)
258 3iuj_A Prolyl endopeptidase; h 96.5 0.23 7.8E-06 51.8 21.4 184 108-300 155-364 (693)
259 3v7d_B Cell division control p 96.5 0.37 1.3E-05 46.6 21.8 161 109-283 291-451 (464)
260 1got_B GT-beta; complex (GTP-b 96.5 0.53 1.8E-05 43.8 24.9 180 109-296 78-258 (340)
261 3frx_A Guanine nucleotide-bind 96.5 0.52 1.8E-05 43.5 23.3 165 125-299 62-231 (319)
262 1yr2_A Prolyl oligopeptidase; 96.5 0.23 7.7E-06 52.2 21.0 183 109-299 190-399 (741)
263 1pgu_A Actin interacting prote 96.5 0.19 6.4E-06 50.4 19.6 160 125-295 113-283 (615)
264 2pbi_B Guanine nucleotide-bind 96.4 0.65 2.2E-05 43.6 22.2 161 124-293 150-313 (354)
265 3sfz_A APAF-1, apoptotic pepti 96.4 0.35 1.2E-05 53.5 22.7 166 123-296 610-775 (1249)
266 4a5s_A Dipeptidyl peptidase 4 96.4 0.15 5.2E-06 53.4 18.8 186 109-300 93-358 (740)
267 4h5i_A Guanine nucleotide-exch 96.4 0.27 9.1E-06 46.7 19.0 176 109-293 158-341 (365)
268 3dwl_C Actin-related protein 2 96.4 0.048 1.7E-06 51.3 13.6 169 109-281 78-269 (377)
269 1yfq_A Cell cycle arrest prote 96.3 0.23 7.7E-06 45.6 17.7 174 109-296 80-283 (342)
270 3hxj_A Pyrrolo-quinoline quino 96.2 0.24 8.4E-06 45.4 17.6 156 109-283 158-313 (330)
271 2xzm_R RACK1; ribosome, transl 96.2 0.76 2.6E-05 42.8 23.6 173 109-293 99-283 (343)
272 1yr2_A Prolyl oligopeptidase; 96.2 0.4 1.4E-05 50.3 21.1 184 109-298 244-444 (741)
273 3dwl_C Actin-related protein 2 96.2 0.033 1.1E-06 52.5 11.2 184 109-297 34-238 (377)
274 3dm0_A Maltose-binding peripla 96.1 0.91 3.1E-05 46.9 23.1 178 109-297 453-634 (694)
275 3jro_A Fusion protein of prote 96.1 0.32 1.1E-05 51.2 19.6 184 109-296 32-239 (753)
276 1nr0_A Actin interacting prote 96.0 1.5 5.2E-05 44.5 24.4 176 109-292 40-218 (611)
277 3v7d_B Cell division control p 96.0 1.2 4E-05 43.0 22.9 180 109-298 143-344 (464)
278 3sfz_A APAF-1, apoptotic pepti 96.0 1.6 5.6E-05 48.1 25.5 135 109-249 638-773 (1249)
279 3dm0_A Maltose-binding peripla 95.9 1 3.5E-05 46.5 22.4 180 109-297 406-594 (694)
280 3mmy_A MRNA export factor; mRN 95.9 1 3.5E-05 41.2 20.7 122 124-250 35-160 (368)
281 4a5s_A Dipeptidyl peptidase 4 95.7 0.93 3.2E-05 47.4 20.9 163 129-295 260-449 (740)
282 3fm0_A Protein CIAO1; WDR39,SG 95.7 0.88 3E-05 42.4 18.8 159 130-294 18-180 (345)
283 3f3f_A Nucleoporin SEH1; struc 95.6 0.86 2.9E-05 41.1 18.3 182 109-295 34-249 (351)
284 3f3f_A Nucleoporin SEH1; struc 95.6 1.2 4.2E-05 40.1 21.3 123 125-250 8-143 (351)
285 3dw8_B Serine/threonine-protei 95.6 1.7 5.8E-05 41.3 22.6 158 129-295 94-315 (447)
286 1z68_A Fibroblast activation p 95.5 0.061 2.1E-06 55.9 11.0 121 109-236 37-187 (719)
287 3jro_A Fusion protein of prote 95.5 0.38 1.3E-05 50.6 17.2 166 126-295 7-189 (753)
288 3mmy_A MRNA export factor; mRN 95.5 1.5 5.1E-05 40.1 21.6 93 109-207 65-161 (368)
289 3dw8_B Serine/threonine-protei 95.4 0.65 2.2E-05 44.4 17.3 166 126-295 26-258 (447)
290 3iz6_a 40S ribosomal protein R 95.4 0.58 2E-05 44.4 16.7 184 109-296 89-281 (380)
291 2ovr_B FBW7, F-BOX/WD repeat p 95.3 2.1 7.3E-05 41.1 21.5 173 109-295 260-442 (445)
292 2oit_A Nucleoporin 214KDA; NH2 95.3 0.21 7.1E-06 49.0 13.5 121 128-250 92-223 (434)
293 2xzm_R RACK1; ribosome, transl 95.3 1.8 6.2E-05 40.1 22.1 164 109-282 141-328 (343)
294 2ovr_B FBW7, F-BOX/WD repeat p 95.3 2.2 7.6E-05 40.9 21.7 170 109-296 140-309 (445)
295 2pm7_B Protein transport prote 95.3 1.7 5.6E-05 39.5 21.0 184 109-294 32-237 (297)
296 4aow_A Guanine nucleotide-bind 95.3 1.7 5.7E-05 39.5 21.9 182 109-299 62-250 (340)
297 1nr0_A Actin interacting prote 95.3 3 0.0001 42.3 23.3 187 99-294 66-269 (611)
298 2oaj_A Protein SNI1; WD40 repe 95.1 1.6 5.3E-05 47.1 20.7 156 128-296 17-183 (902)
299 1z68_A Fibroblast activation p 95.0 0.073 2.5E-06 55.3 9.6 181 108-297 90-348 (719)
300 4gq1_A NUP37; propeller, trans 95.0 2.6 8.8E-05 40.1 20.8 183 109-297 167-391 (393)
301 3gre_A Serine/threonine-protei 94.9 1.6 5.5E-05 41.6 18.3 136 109-250 193-359 (437)
302 2bkl_A Prolyl endopeptidase; m 94.8 1.1 3.8E-05 46.3 18.2 178 110-297 204-399 (695)
303 1p22_A F-BOX/WD-repeat protein 94.8 2.9 9.8E-05 40.1 19.9 170 109-296 154-326 (435)
304 1p22_A F-BOX/WD-repeat protein 94.7 3.2 0.00011 39.8 20.7 171 109-294 194-364 (435)
305 3lrv_A PRE-mRNA-splicing facto 94.7 1.7 5.8E-05 40.2 17.4 118 175-297 126-246 (343)
306 2oaj_A Protein SNI1; WD40 repe 94.6 3.8 0.00013 44.0 22.2 172 109-293 40-240 (902)
307 4aow_A Guanine nucleotide-bind 94.6 2.6 8.9E-05 38.2 22.0 163 109-281 151-324 (340)
308 2hes_X YDR267CP; beta-propelle 94.5 2.8 9.7E-05 38.6 21.6 181 109-293 35-228 (330)
309 3zwu_A Alkaline phosphatase PH 94.5 0.48 1.7E-05 48.6 13.8 111 127-238 382-551 (592)
310 2xe4_A Oligopeptidase B; hydro 94.2 1.7 6E-05 45.6 17.9 177 109-293 202-398 (751)
311 2hes_X YDR267CP; beta-propelle 94.1 3.6 0.00012 37.9 20.1 158 127-292 13-181 (330)
312 2pm7_B Protein transport prote 93.7 3.9 0.00013 36.9 22.3 171 109-281 78-272 (297)
313 2xe4_A Oligopeptidase B; hydro 93.1 3.2 0.00011 43.5 17.7 158 130-294 175-353 (751)
314 2oit_A Nucleoporin 214KDA; NH2 93.0 1.1 3.7E-05 43.8 13.1 161 129-295 37-223 (434)
315 4h5i_A Guanine nucleotide-exch 92.8 6.4 0.00022 36.9 18.3 159 131-298 136-303 (365)
316 3zwu_A Alkaline phosphatase PH 92.6 1.5 5.2E-05 44.9 13.7 107 173-281 382-548 (592)
317 2j04_A TAU60, YPL007P, hypothe 92.2 9.8 0.00033 38.8 19.0 142 130-282 131-286 (588)
318 4gga_A P55CDC, cell division c 92.2 8.1 0.00028 36.7 23.8 154 123-280 225-381 (420)
319 3gre_A Serine/threonine-protei 91.6 9.4 0.00032 36.1 20.8 182 109-297 87-294 (437)
320 3efo_B SEC24 related gene fami 91.4 0.071 2.4E-06 56.6 2.3 65 44-108 595-659 (770)
321 3eh2_A Protein transport prote 91.2 0.076 2.6E-06 56.3 2.2 65 43-107 590-654 (766)
322 1tl2_A L10, protein (tachylect 91.2 4.2 0.00014 36.3 13.1 110 129-248 41-161 (236)
323 3bg1_A Protein SEC13 homolog; 90.9 6.7 0.00023 35.7 15.3 170 109-281 82-280 (316)
324 3vu4_A KMHSV2; beta-propeller 90.4 11 0.00038 35.0 17.6 82 121-207 188-272 (355)
325 3bg1_A Protein SEC13 homolog; 90.0 10 0.00035 34.4 15.7 184 109-294 36-246 (316)
326 1tl2_A L10, protein (tachylect 89.7 11 0.00037 33.7 14.7 102 173-282 39-152 (236)
327 3eh1_A Protein transport prote 89.2 0.15 5E-06 54.0 2.3 66 42-107 570-643 (751)
328 3v9f_A Two-component system se 89.0 24 0.00081 36.7 21.2 150 129-296 450-612 (781)
329 2j04_B YDR362CP, TAU91; beta p 88.9 8 0.00028 38.7 15.0 176 109-293 236-426 (524)
330 3vu4_A KMHSV2; beta-propeller 87.9 17 0.00058 33.6 17.9 112 134-250 143-271 (355)
331 3v9f_A Two-component system se 85.5 29 0.001 36.1 17.6 151 129-294 407-567 (781)
332 4gq1_A NUP37; propeller, trans 85.3 25 0.00084 33.0 19.8 97 109-208 112-220 (393)
333 2j04_A TAU60, YPL007P, hypothe 85.2 35 0.0012 34.7 20.5 160 126-300 83-259 (588)
334 4gga_A P55CDC, cell division c 84.2 28 0.00096 32.8 24.9 183 109-300 170-358 (420)
335 2ad6_A Methanol dehydrogenase 84.1 37 0.0013 34.1 20.0 30 132-161 238-282 (571)
336 4a2l_A BT_4663, two-component 83.5 38 0.0013 35.3 17.4 148 130-293 358-524 (795)
337 4ggc_A P55CDC, cell division c 82.0 26 0.0009 30.8 23.8 153 123-279 145-300 (318)
338 1kb0_A Quinohemoprotein alcoho 80.8 54 0.0019 33.7 19.1 30 267-297 480-509 (677)
339 3q7m_A Lipoprotein YFGL, BAMB; 80.5 36 0.0012 31.4 18.5 133 140-290 239-373 (376)
340 4a2l_A BT_4663, two-component 78.1 68 0.0023 33.3 22.3 149 129-294 406-570 (795)
341 2zuy_A YESX protein; beta-prop 75.8 73 0.0025 32.4 17.8 121 153-282 274-411 (620)
342 4ggc_A P55CDC, cell division c 67.0 65 0.0022 28.1 22.5 131 109-249 46-180 (318)
343 1kb0_A Quinohemoprotein alcoho 66.7 1.2E+02 0.0041 31.1 18.6 70 178-250 396-507 (677)
344 2nut_A Protein transport prote 65.8 2.1 7.3E-05 45.3 1.8 63 41-108 592-654 (769)
345 1m2v_B SEC24, protein transpor 65.1 1.9 6.5E-05 46.5 1.2 44 41-84 721-764 (926)
346 1pcx_A Protein transport prote 65.0 2 6.9E-05 45.7 1.4 44 41-84 605-648 (810)
347 1kv9_A Type II quinohemoprotei 64.0 1.3E+02 0.0045 30.6 16.6 16 221-236 384-399 (668)
348 3sbq_A Nitrous-oxide reductase 63.5 22 0.00074 36.2 8.4 160 109-271 299-498 (638)
349 2cn3_A Xyloglucanase, beta-1,4 63.3 1.4E+02 0.0049 30.8 15.7 116 130-250 24-164 (737)
350 2j04_B YDR362CP, TAU91; beta p 61.0 1.3E+02 0.0045 29.6 19.5 183 108-295 183-386 (524)
351 1m2o_A SEC23, protein transpor 58.7 3.5 0.00012 43.7 1.8 63 41-108 594-656 (768)
352 3b7f_A Glycosyl hydrolase, BNR 56.9 1E+02 0.0035 28.7 12.0 154 128-292 54-259 (394)
353 3b7f_A Glycosyl hydrolase, BNR 52.9 1.2E+02 0.0041 28.2 11.7 141 130-281 116-296 (394)
354 3a0f_A Xyloglucanase; beta-pro 52.8 2.2E+02 0.0074 29.6 15.0 150 127-283 19-201 (763)
355 2w18_A PALB2, fancn, partner a 52.5 1.6E+02 0.0053 27.8 15.2 124 109-235 204-344 (356)
356 2ad6_A Methanol dehydrogenase 51.7 1.9E+02 0.0066 28.7 21.3 16 178-193 389-404 (571)
357 2zux_A YESW protein; beta-prop 49.5 2.2E+02 0.0076 28.7 18.5 98 179-282 294-407 (591)
358 1sqj_A OXG-RCBH, oligoxylogluc 47.0 2.7E+02 0.0092 29.0 15.2 147 128-283 14-189 (789)
359 3ott_A Two-component system se 43.8 2.8E+02 0.0096 28.3 17.3 148 130-294 473-625 (758)
360 1w6s_A Methanol dehydrogenase 40.5 3E+02 0.01 27.7 22.2 30 132-161 244-288 (599)
361 3q7m_A Lipoprotein YFGL, BAMB; 39.5 2.2E+02 0.0074 25.8 21.0 98 186-295 239-337 (376)
362 1sqj_A OXG-RCBH, oligoxylogluc 37.7 3.7E+02 0.013 27.9 17.4 147 129-281 64-247 (789)
363 2xbg_A YCF48-like protein; pho 34.8 2.5E+02 0.0087 25.2 17.9 139 130-282 81-222 (327)
364 3sbq_A Nitrous-oxide reductase 34.2 1E+02 0.0036 31.3 7.8 74 174-249 322-407 (638)
365 2cn3_A Xyloglucanase, beta-1,4 34.2 4E+02 0.014 27.3 13.8 105 176-282 24-151 (737)
366 3a0f_A Xyloglucanase; beta-pro 30.2 2.6E+02 0.009 28.9 10.8 109 173-282 19-152 (763)
367 1yiq_A Quinohemoprotein alcoho 27.0 5.1E+02 0.017 26.3 20.3 18 176-193 390-407 (689)
368 2zux_A YESW protein; beta-prop 23.8 5.7E+02 0.02 25.8 21.7 180 107-296 114-374 (591)
369 1flg_A Protein (quinoprotein e 23.3 5.5E+02 0.019 25.4 20.1 18 131-148 248-265 (582)
370 3s9j_A Member of DUF4221 famil 22.3 4E+02 0.014 25.0 9.4 64 187-251 40-111 (369)
371 1kv9_A Type II quinohemoprotei 20.9 6.5E+02 0.022 25.3 20.6 32 179-210 234-283 (668)
No 1
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=2.6e-35 Score=293.47 Aligned_cols=247 Identities=31% Similarity=0.559 Sum_probs=210.5
Q ss_pred ecCCCCCCCCccCcccccccCCCCcee--EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEc
Q psy13629 81 VIDPNSDEMPVQERCSFEKLQPDGAYL--LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTF 158 (395)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~~~~~~--~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~ 158 (395)
.+.+.....++...|+..+..+..++. ++|+++++++ ..++.+++.+..+.||+||+.+++|||+|...++|+++++
T Consensus 63 ~C~~g~~~~~~~~~C~~~~~~~~ll~~~~~~I~~i~l~~-~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~ 141 (400)
T 3p5b_L 63 QCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDR-SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQL 141 (400)
T ss_dssp CCCTTCCCCTTTSSCCCSTTSCEEEEEETTEEEEECTTS-CSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred eccccccccccccceeeccccceeEEeccceeEEEccCC-cceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEc
Confidence 455666667777889887777766665 4999999988 6677788899999999999999999999999999999999
Q ss_pred cCCCC-CceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEee
Q psy13629 159 DGNNV-GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDW 237 (395)
Q Consensus 159 dg~~~-~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~ 237 (395)
+|... .....++...+..|.||||||.+++|||+|...++|.+++++|+.+++++...+..|++||+||..|+||||||
T Consensus 142 ~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~ 221 (400)
T 3p5b_L 142 DRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 221 (400)
T ss_dssp ------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEEC
T ss_pred ccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeC
Confidence 98321 13466777788999999999999999999999999999999999999999888999999999999999999999
Q ss_pred CCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeeee-----eecee-eeeee
Q psy13629 238 GEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLVT-----SLGHI-NLELY 311 (395)
Q Consensus 238 ~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~t-----~~g~~-~i~Lf 311 (395)
+..++|+++++|| +.+++++...+.+|+||++|+.+++|||+|+..++|++++++|..++.. .++++ +++++
T Consensus 222 ~~~~~I~~~~~dG--~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~ 299 (400)
T 3p5b_L 222 GTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 299 (400)
T ss_dssp SSSCCEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE
T ss_pred CCCCEEEEEeCCC--CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe
Confidence 9778999999999 8888898888999999999999999999999999999999999887662 23455 77776
Q ss_pred eccCCccccceeeeeccceecceeEEEEecCcEEEecCC
Q psy13629 312 CNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDP 350 (395)
Q Consensus 312 ~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~ 350 (395)
.+..||.+|.+..|+.-++
T Consensus 300 --------------------~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 300 --------------------EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp --------------------TTEEEEEESSSCSEEEEES
T ss_pred --------------------CCEEEEecCCCCeEEEEEc
Confidence 6677888877777766553
No 2
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=5.1e-35 Score=286.11 Aligned_cols=245 Identities=33% Similarity=0.720 Sum_probs=214.0
Q ss_pred eecCCCCCCCCccCcccccccCCCCcee--EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEE
Q psy13629 80 HVIDPNSDEMPVQERCSFEKLQPDGAYL--LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCT 157 (395)
Q Consensus 80 ~~~~~~~~~~~~~~~C~~~~~~~~~~~~--~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~ 157 (395)
+.+++...+.++...|+..++.+..++. ++|+++++++ ..++.+.+.+..+.|++||+.++.|||+|...++|+|++
T Consensus 23 C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~~I~~i~~~g-~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~ 101 (349)
T 3v64_C 23 CWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHR-SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRAN 101 (349)
T ss_dssp EECCTTEEECTTSSCEEESSSCCEEEEECBSCEEEECTTS-CCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCccCCCCCCcccccccCceeEeecccceEEEeCCC-CeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEe
Confidence 3456666667788899987776655555 4899999988 667788889999999999999999999999999999999
Q ss_pred ccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEee
Q psy13629 158 FDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDW 237 (395)
Q Consensus 158 ~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~ 237 (395)
++|+ ..+.++..++..|.||||||.+++|||+|...++|.+++++|+.+++++...+..|++||+||.+|+|||+||
T Consensus 102 ~~g~---~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~ 178 (349)
T 3v64_C 102 LNGS---NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDW 178 (349)
T ss_dssp TTSC---SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEEC
T ss_pred cCCC---CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEecc
Confidence 9997 4566777788999999999999999999999999999999999999988778999999999999999999999
Q ss_pred CCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeee---eeecee-eeeeeec
Q psy13629 238 GEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV---TSLGHI-NLELYCN 313 (395)
Q Consensus 238 ~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~---t~~g~~-~i~Lf~d 313 (395)
+..++|+++++|| ..+++++...+.+|+||++|+.+++|||+|+..++|++++++|..++. ..+++| +++++
T Consensus 179 ~~~~~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-- 254 (349)
T 3v64_C 179 GNTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-- 254 (349)
T ss_dssp SSSCEEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE--
T ss_pred CCCCEEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE--
Confidence 8669999999999 788888888899999999999999999999999999999999987765 335566 77766
Q ss_pred cCCccccceeeeeccceecceeEEEEecCcEEEecCC
Q psy13629 314 VFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDP 350 (395)
Q Consensus 314 ~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~ 350 (395)
++..||.++.+..|+.-++
T Consensus 255 ------------------~~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 255 ------------------EDSLYWTDWHTKSINSANK 273 (349)
T ss_dssp ------------------TTEEEEEETTTTEEEEEET
T ss_pred ------------------CCEEEEecCCCCeEEEEEc
Confidence 7788999988888877664
No 3
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=5.3e-35 Score=306.24 Aligned_cols=246 Identities=34% Similarity=0.627 Sum_probs=209.2
Q ss_pred eecCCCCCCCCccCcccccccCCCCcee--EEEEEeeCCCCC--ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEE
Q psy13629 80 HVIDPNSDEMPVQERCSFEKLQPDGAYL--LDIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISC 155 (395)
Q Consensus 80 ~~~~~~~~~~~~~~~C~~~~~~~~~~~~--~~I~~~~l~~~~--~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~ 155 (395)
+.|+....+.++...|.. ++++..++. ++|++++++... .....++++.++.||+||+.+++|||+|...++|+|
T Consensus 297 C~C~~g~~l~~d~~~C~~-~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r 375 (619)
T 3s94_A 297 CACPTGVKLLENGKTCKD-GATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRR 375 (619)
T ss_dssp EECCTTCCBCTTSSCBCS-SCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EeCCchheecccCcccCC-CCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEE
Confidence 345555656666666665 234444554 489999998732 233445678999999999999999999999999999
Q ss_pred EEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEE
Q psy13629 156 CTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWT 235 (395)
Q Consensus 156 ~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwt 235 (395)
+.++|+ ..++++..++..|.||||||.+++|||||...++|.+++++|+.+++++.+.+.+|++||+||.+|+||||
T Consensus 376 ~~~~g~---~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~t 452 (619)
T 3s94_A 376 SFIDGS---GSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWT 452 (619)
T ss_dssp EETTSC---SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEE
T ss_pred EEcCCC---ccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEe
Confidence 999997 55777778889999999999999999999999999999999999999997889999999999999999999
Q ss_pred eeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeee---eeecee-eeeee
Q psy13629 236 DWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV---TSLGHI-NLELY 311 (395)
Q Consensus 236 d~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~---t~~g~~-~i~Lf 311 (395)
||+..++|++++||| +.+++++...+.+|+||++|+.+++|||+|+..++|++++++|..++. ..+.+| +++++
T Consensus 453 D~g~~~~I~r~~~dG--~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~ 530 (619)
T 3s94_A 453 DWGEIPKIERAALDG--SDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLL 530 (619)
T ss_dssp ECSSSCEEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEE
T ss_pred cCCCCCEEEEEccCC--CccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEE
Confidence 999889999999999 888899988899999999999999999999999999999999998876 235566 77777
Q ss_pred eccCCccccceeeeeccceecceeEEEEecCcEEEecCCC
Q psy13629 312 CNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPT 351 (395)
Q Consensus 312 ~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~ 351 (395)
++..||.++.+..|+..++.
T Consensus 531 --------------------~~~ly~tD~~~~~I~~~~k~ 550 (619)
T 3s94_A 531 --------------------GDYVYWTDWQRRSIERVHKR 550 (619)
T ss_dssp --------------------TTEEEEECTTSSCEEEEESS
T ss_pred --------------------CCEEEEeecCCCeEEEEEcC
Confidence 66888888888888777664
No 4
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=6.6e-35 Score=305.90 Aligned_cols=244 Identities=27% Similarity=0.375 Sum_probs=204.1
Q ss_pred ecCCCCCCCCccCcccccccCCCCcee--EEEEEeeCCCCC--ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEE
Q psy13629 81 VIDPNSDEMPVQERCSFEKLQPDGAYL--LDIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCC 156 (395)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~~~~~~--~~I~~~~l~~~~--~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~ 156 (395)
.|+....+.++...|.. +.+..+|. ++|+++.++... .....+.+++++.+|+||+.+++|||+|...++|+|+
T Consensus 290 ~C~~g~~l~~d~~~C~~--~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~ 367 (628)
T 4a0p_A 290 GCPAHYSLNADNRTCSA--PTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKA 367 (628)
T ss_dssp ECSTTCEECTTSSCEEC--CSSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EcCCCcEecccCCcCcc--ccceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEE
Confidence 44455555555555653 23334444 388888887632 2445567889999999999999999999999999999
Q ss_pred EccCCCCCceEEEEeC------CCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCC
Q psy13629 157 TFDGNNVGSKHNVITN------GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDS 230 (395)
Q Consensus 157 ~~dg~~~~~~~~i~~~------~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g 230 (395)
.++|+ ..++++.. .+..|.||||||++++|||||...++|.+++++|+.+++++...+.+|++|||||.+|
T Consensus 368 ~~~g~---~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g 444 (628)
T 4a0p_A 368 QEDGS---QGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKG 444 (628)
T ss_dssp ETTSC---SCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTT
T ss_pred EcCCC---CceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCC
Confidence 99997 44455544 5778999999999999999999999999999999999999878899999999999999
Q ss_pred eEEEEeeCCCC-eEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeee---eeecee
Q psy13629 231 IMFWTDWGEVP-KIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV---TSLGHI 306 (395)
Q Consensus 231 ~LYwtd~~~~~-~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~---t~~g~~ 306 (395)
+||||||+..+ +|++++||| +.+++++.+.+.+|+||++|+.+++|||+|+..++|+++++||..++. ..+.+|
T Consensus 445 ~ly~tD~g~~~~~I~r~~~dG--~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P 522 (628)
T 4a0p_A 445 YMYFTNLQERSPKIERAALDG--TEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQP 522 (628)
T ss_dssp EEEEEEEETTEEEEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCE
T ss_pred eEEEeecCCCCCeEEEEeCCC--CCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCc
Confidence 99999999664 999999999 889999998999999999999999999999999999999999999877 235566
Q ss_pred -eeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCC
Q psy13629 307 -NLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPT 351 (395)
Q Consensus 307 -~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~ 351 (395)
++++| ++..||.++....|+..++.
T Consensus 523 ~glav~--------------------~~~ly~tD~~~~~i~~~~k~ 548 (628)
T 4a0p_A 523 VGLTVF--------------------ENWLYWIDKQQQMIEKIDMT 548 (628)
T ss_dssp EEEEEE--------------------TTEEEEEETTTTEEEEEETT
T ss_pred EEEEEE--------------------CCEEEEEECCCCeEEEEECc
Confidence 88877 78899999999888887764
No 5
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=2.2e-34 Score=278.19 Aligned_cols=228 Identities=43% Similarity=0.843 Sum_probs=197.8
Q ss_pred ccCCCCcee--EEEEEeeCCCCC-ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCC
Q psy13629 99 KLQPDGAYL--LDIRIANLSRPL-KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLI 175 (395)
Q Consensus 99 ~~~~~~~~~--~~I~~~~l~~~~-~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~ 175 (395)
+++|..+|. ++|+++++++.. .++.++..++.+.+|+||+.+++|||+|...++|+|++++|+. ..+.++..++.
T Consensus 2 g~~p~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~--~~~~~~~~~l~ 79 (318)
T 3sov_A 2 GSAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--SVQNVVVSGLL 79 (318)
T ss_dssp --CCEEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSS--CCCEEEEECCS
T ss_pred CCccEEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCC--ceEEEEcCCCC
Confidence 455655665 599999999843 5777888889999999999999999999999999999999863 23456667788
Q ss_pred CcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcce
Q psy13629 176 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHR 255 (395)
Q Consensus 176 ~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~ 255 (395)
.|.|||+||.+++|||+|...++|.+++++|..+++++...+..|++|++||.+|+|||+||+..++|+++++|| +.+
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--~~~ 157 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--SSR 157 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS--CSC
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC--CCe
Confidence 999999999999999999999999999999999999887889999999999999999999998789999999999 788
Q ss_pred EEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeee---eeecee-eeeeeeccCCccccceeeeecccee
Q psy13629 256 KVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV---TSLGHI-NLELYCNVFPKTCENFMKHCENGYY 331 (395)
Q Consensus 256 ~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~---t~~g~~-~i~Lf~d~ap~t~~nf~~l~~~g~y 331 (395)
++++...+.+|+||++|+.+++|||+|+..++|++++++|..++. ..+++| +++++
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-------------------- 217 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-------------------- 217 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE--------------------
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe--------------------
Confidence 888888899999999999999999999999999999999988765 245566 77776
Q ss_pred cceeEEEEecCcEEEecCC
Q psy13629 332 NGTKFHRSIRNFMIQGGDP 350 (395)
Q Consensus 332 ~~~~~~r~~~~~~iq~g~~ 350 (395)
.+..||.++.+..|..-++
T Consensus 218 ~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 218 EDILYWTDWSTHSILACNK 236 (318)
T ss_dssp TTEEEEEETTTTEEEEEET
T ss_pred CCEEEEEecCCCeEEEEEC
Confidence 5677888887777776665
No 6
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=6.1e-34 Score=282.15 Aligned_cols=244 Identities=34% Similarity=0.724 Sum_probs=211.9
Q ss_pred ecCCCCCCCCccCcccccccCCCCcee--EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEc
Q psy13629 81 VIDPNSDEMPVQERCSFEKLQPDGAYL--LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTF 158 (395)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~~~~~~--~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~ 158 (395)
.+++...+.++...|+..++.+..++. ++|+++++++ ...+.+++.+..+.|++||+.+++|||+|...++|+++++
T Consensus 67 ~C~~g~~l~~d~~~C~~~~~~~~l~~~~~~~I~~i~~~~-~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~ 145 (386)
T 3v65_B 67 WCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHR-SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANL 145 (386)
T ss_dssp ECCTTEEECTTSSCEEECSSCCEEEEECBSCEEEECTTS-CCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EECCCceEcCCCCeECCccccceeEeecCccceeeccCC-CcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 455666566677889887665545444 4899999988 6677888899999999999999999999999999999999
Q ss_pred cCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeC
Q psy13629 159 DGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWG 238 (395)
Q Consensus 159 dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~ 238 (395)
+|+ ..+.++..++..|.||||||.+++|||+|...++|.+++++|+.+++++...+..|++|++||.+|+|||+||+
T Consensus 146 ~g~---~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~ 222 (386)
T 3v65_B 146 NGS---NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG 222 (386)
T ss_dssp TSC---CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS
T ss_pred CCC---CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC
Confidence 997 55677777889999999999999999999999999999999999999987788999999999999999999998
Q ss_pred CCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeee---eeecee-eeeeeecc
Q psy13629 239 EVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV---TSLGHI-NLELYCNV 314 (395)
Q Consensus 239 ~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~---t~~g~~-~i~Lf~d~ 314 (395)
..++|+++++|| ..++.++...+.+|+||++|+.+++|||+|+..++|++++++|..++. ..+++| +++++
T Consensus 223 ~~~~I~r~~~dG--~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~--- 297 (386)
T 3v65_B 223 NTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--- 297 (386)
T ss_dssp SSCEEEEEETTS--CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE---
T ss_pred CCCEEEEEeCCC--CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE---
Confidence 669999999999 788888888899999999999999999999999999999999987765 335566 77776
Q ss_pred CCccccceeeeeccceecceeEEEEecCcEEEecCC
Q psy13629 315 FPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDP 350 (395)
Q Consensus 315 ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~ 350 (395)
++..||.+|.+..|+.-++
T Consensus 298 -----------------~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 298 -----------------EDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp -----------------TTEEEEEETTTTEEEEEET
T ss_pred -----------------CCEEEEeeCCCCeEEEEEC
Confidence 6788888888877776653
No 7
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=4.8e-34 Score=305.44 Aligned_cols=246 Identities=31% Similarity=0.560 Sum_probs=207.4
Q ss_pred cCCCCCCCCccCcccccccCCCCcee--EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEcc
Q psy13629 82 IDPNSDEMPVQERCSFEKLQPDGAYL--LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD 159 (395)
Q Consensus 82 ~~~~~~~~~~~~~C~~~~~~~~~~~~--~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~d 159 (395)
+.+...+.++...|+..+..+..++. ++|+++++++ ..++.++..++.+.||+||+.+++|||+|...++|+++.++
T Consensus 376 C~~Gy~l~~~~~~C~~~~~~p~Ll~an~~~Ir~i~l~~-~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~ 454 (791)
T 3m0c_C 376 CEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDR-SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLD 454 (791)
T ss_dssp CCSSEECCSSCCCCEETTSCCEEEEECBSSEEEECTTS-CCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-
T ss_pred cCCCCEeCCCCceeeecccccccccccccceeEeeccC-CcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEecc
Confidence 34444455666778887666655554 4889999988 67788888999999999999999999999999999999999
Q ss_pred CCCC-CceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeC
Q psy13629 160 GNNV-GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWG 238 (395)
Q Consensus 160 g~~~-~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~ 238 (395)
|... .....++...+..|.||||||.+++|||+|...++|.|++++|+.+++++...+..|++|||||.+|+||||||+
T Consensus 455 g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g 534 (791)
T 3m0c_C 455 RAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 534 (791)
T ss_dssp -------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS
T ss_pred CCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC
Confidence 8421 134566666899999999999999999999999999999999999999998889999999999999999999999
Q ss_pred CCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeeeee-----ecee-eeeeee
Q psy13629 239 EVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLVTS-----LGHI-NLELYC 312 (395)
Q Consensus 239 ~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~t~-----~g~~-~i~Lf~ 312 (395)
..++|++++|+| +.+++++...+.+|+||+||+.+++|||+|+..++|++++++|..++... +.++ +|+++
T Consensus 535 ~~~~I~~~~~dG--~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~- 611 (791)
T 3m0c_C 535 TPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF- 611 (791)
T ss_dssp SSCEEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-
T ss_pred CCCeEEEEecCC--CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe-
Confidence 778999999999 88999999899999999999999999999999999999999999887621 3344 66666
Q ss_pred ccCCccccceeeeeccceecceeEEEEecCcEEEecCC
Q psy13629 313 NVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDP 350 (395)
Q Consensus 313 d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~ 350 (395)
.+.+||.++.+..|+..++
T Consensus 612 -------------------~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 612 -------------------EDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp -------------------TTEEEEEETTTTEEEEEET
T ss_pred -------------------CCEEEEEECCCCEEEEEeC
Confidence 6788888888888877664
No 8
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=1.3e-33 Score=296.07 Aligned_cols=227 Identities=35% Similarity=0.645 Sum_probs=196.5
Q ss_pred ccCCCCcee--EEEEEeeCCCCCc-cEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCC
Q psy13629 99 KLQPDGAYL--LDIRIANLSRPLK-PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLI 175 (395)
Q Consensus 99 ~~~~~~~~~--~~I~~~~l~~~~~-~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~ 175 (395)
.|++.++|. ++|+++++++... ....+..++.+.||+||+.+++|||+|...++|+|++++|+ ..++++..++.
T Consensus 4 ~p~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~---~~~~v~~~g~~ 80 (628)
T 4a0p_A 4 VPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGS---ALEHVVEFGLD 80 (628)
T ss_dssp -CCCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCS
T ss_pred CCCcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCC---CcEEEEeCCCC
Confidence 455556666 4899999988322 22334578899999999999999999999999999999997 55777777888
Q ss_pred CcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcce
Q psy13629 176 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHR 255 (395)
Q Consensus 176 ~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~ 255 (395)
.|.||||||.+++|||+|...++|.+++++|+.+++++...+..|++||+||.+|+||||||+..++|++++||| +.+
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG--~~~ 158 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG--SER 158 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CSC
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC--Cce
Confidence 999999999999999999999999999999999999987889999999999999999999999889999999999 788
Q ss_pred EEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeee--eeecee-eeeeeeccCCccccceeeeeccceec
Q psy13629 256 KVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV--TSLGHI-NLELYCNVFPKTCENFMKHCENGYYN 332 (395)
Q Consensus 256 ~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~--t~~g~~-~i~Lf~d~ap~t~~nf~~l~~~g~y~ 332 (395)
++++. .+.+|+||++|+.+++|||+|...++|++++++|..++. ..+.+| ++++| .
T Consensus 159 ~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~--------------------~ 217 (628)
T 4a0p_A 159 TTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQY--------------------Q 217 (628)
T ss_dssp EEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEE--------------------T
T ss_pred EEEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEE--------------------C
Confidence 87775 788999999999999999999999999999999987754 345556 77777 6
Q ss_pred ceeEEEEecCcEEEecCCC
Q psy13629 333 GTKFHRSIRNFMIQGGDPT 351 (395)
Q Consensus 333 ~~~~~r~~~~~~iq~g~~~ 351 (395)
+..||.+|.+..|...|+.
T Consensus 218 ~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 218 DYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp TEEEEEETTTTEEEEEETT
T ss_pred CEEEEecCCCCEEEEEECC
Confidence 7888888888888777654
No 9
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=2.1e-33 Score=294.11 Aligned_cols=220 Identities=44% Similarity=0.868 Sum_probs=185.1
Q ss_pred EEEEEeeCCCCC-ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCC
Q psy13629 108 LDIRIANLSRPL-KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 186 (395)
Q Consensus 108 ~~I~~~~l~~~~-~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~ 186 (395)
++|+++++++.. +++.+++.++.+.||+||+.++.|||+|...++|+|+.++|.. ..++++..++..|+||||||.+
T Consensus 18 ~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 18 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--SVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp SBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------CEEEECSSCSCEEEEEEETTT
T ss_pred ccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--ceEEEEeCCCCCcCeEEEEecC
Confidence 699999998843 5778889999999999999999999999999999999999862 2366777788999999999999
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
++|||+|...++|.+++++|+.+++++...+..|++||+||.+|+||||||+..++|+|+++|| +.+++++...+.+|
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG--~~~~~l~~~~~~~P 173 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--SSRFIIINSEIYWP 173 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEEEECSSCSSE
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC--CceEEEEeCCCCCC
Confidence 9999999999999999999999999987889999999999999999999999889999999999 88999998889999
Q ss_pred eeEEEeccccEEEEeccceeeeeeeccccceeee---eeecee-eeeeeeccCCccccceeeeeccceecceeEEEEecC
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV---TSLGHI-NLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRN 342 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~---t~~g~~-~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~ 342 (395)
+||++|+.+++|||+|...++|++++++|..++. ..+.+| ++++| .+..||.+|.+
T Consensus 174 ~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~--------------------~~~ly~td~~~ 233 (619)
T 3s94_A 174 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--------------------EDILYWTDWST 233 (619)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEES--------------------SSEEEEECTTT
T ss_pred cEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEe--------------------CCEEEEecCCC
Confidence 9999999999999999999999999999988876 245566 77777 55778888887
Q ss_pred cEEEecCCC
Q psy13629 343 FMIQGGDPT 351 (395)
Q Consensus 343 ~~iq~g~~~ 351 (395)
..|+.-++.
T Consensus 234 ~~V~~~d~~ 242 (619)
T 3s94_A 234 HSILACNKY 242 (619)
T ss_dssp CSEEEEESS
T ss_pred CEEEEEECC
Confidence 777766653
No 10
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=3.8e-32 Score=261.93 Aligned_cols=220 Identities=34% Similarity=0.635 Sum_probs=185.4
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCC-CceEEEEeCCCCCcceEEEecCC
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV-GSKHNVITNGLITPDGLAIDWLT 186 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~-~~~~~i~~~~~~~p~glAVD~~~ 186 (395)
++|+++++++ ..++.+++.+..+.|++||+.+++|||+|...++|++++++|... ...+.++...+..|.|||+||.+
T Consensus 10 ~~I~~i~~~~-~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDR-SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTS-CCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCC-cceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 4799999988 566777888999999999999999999999999999999997210 03345555677899999999999
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
++|||+|...++|.+++++|+.+++++...+..|++|++||.+|+|||+||+..++|+++++|| +.+++++...+.+|
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG--~~~~~~~~~~~~~P 166 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWP 166 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CCEEEEECSSCSCE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC--CCeEEEEECCCCCc
Confidence 9999999999999999999999988887788999999999999999999998558999999999 78888887788999
Q ss_pred eeEEEeccccEEEEeccceeeeeeeccccceeee--e---eecee-eeeeeeccCCccccceeeeeccceecceeEEEEe
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV--T---SLGHI-NLELYCNVFPKTCENFMKHCENGYYNGTKFHRSI 340 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~--t---~~g~~-~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~ 340 (395)
+||++|+.+++|||+|...++|++++++|..++. . ..++| +++++ .+..||.++
T Consensus 167 ~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--------------------~~~ly~~d~ 226 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--------------------EDKVFWTDI 226 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--------------------TTEEEEEET
T ss_pred eEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--------------------CCEEEEEEC
Confidence 9999999999999999999999999999987765 1 13445 66666 567777777
Q ss_pred cCcEEEecCC
Q psy13629 341 RNFMIQGGDP 350 (395)
Q Consensus 341 ~~~~iq~g~~ 350 (395)
.+..|+.-++
T Consensus 227 ~~~~V~~~~~ 236 (316)
T 1ijq_A 227 INEAIFSANR 236 (316)
T ss_dssp TTTEEEEEET
T ss_pred CCCeEEEEeC
Confidence 7766665554
No 11
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.97 E-value=2.1e-30 Score=275.07 Aligned_cols=228 Identities=32% Similarity=0.588 Sum_probs=188.2
Q ss_pred ecCCCCCCCCccCcccccccCCCCcee--EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEc
Q psy13629 81 VIDPNSDEMPVQERCSFEKLQPDGAYL--LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTF 158 (395)
Q Consensus 81 ~~~~~~~~~~~~~~C~~~~~~~~~~~~--~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~ 158 (395)
.+++...+.++...|...+..+..++. ++|+++++++ ..++.++..++.+.||+||+.+++|||+|...++|+++++
T Consensus 357 ~C~~G~~~~~~~~~C~~~~~~~~ll~~~~~~I~~id~~~-~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~ 435 (699)
T 1n7d_A 357 QCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDR-SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQL 435 (699)
T ss_dssp CCCSSCBCCSSCCCCBCCSSCCCBCCCCTTC-CEECTTS-CCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEES
T ss_pred eeecccccCCCCCcccccccceeEEecCccceEEEeCCC-CcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEec
Confidence 344555555666778877666666665 4889999987 6677778889999999999999999999999999999999
Q ss_pred cCCCC-CceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEee
Q psy13629 159 DGNNV-GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDW 237 (395)
Q Consensus 159 dg~~~-~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~ 237 (395)
++... .....++...+..|.||||||.+++|||+|...++|.+++++|..+++++...+..|++|||||..|+|||+||
T Consensus 436 ~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~ 515 (699)
T 1n7d_A 436 DRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDW 515 (699)
T ss_dssp CCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCC
T ss_pred CCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEccc
Confidence 97210 02334455567889999999999999999999999999999999998888777899999999999999999999
Q ss_pred CCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeeee-----eecee-eeeee
Q psy13629 238 GEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLVT-----SLGHI-NLELY 311 (395)
Q Consensus 238 ~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~t-----~~g~~-~i~Lf 311 (395)
+...+|++++++| ..+++++...+.+|+||++|+.+++|||+|+..++|++++++|..++.. .++++ +++++
T Consensus 516 ~~~~~I~~~~~dG--~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd 593 (699)
T 1n7d_A 516 GTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 593 (699)
T ss_dssp SSSCCEEBCCSSS--CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEE
T ss_pred CCCCeEEEEeCCC--CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEE
Confidence 8668999999999 7787888888899999999999999999999999999999999877651 13445 67766
No 12
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.96 E-value=9.8e-28 Score=234.40 Aligned_cols=197 Identities=24% Similarity=0.419 Sum_probs=172.5
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|.++++++......+...+..|.||++|+.+++|||+|...++|.+++++|. ....++...+..|+|||||+.++.
T Consensus 96 ~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---~~~~l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 96 RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---HRKVLLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECTTCSCEEEEEEETTTTE
T ss_pred ceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC---ceEEEEeCCCCCcceEEEecCcCe
Confidence 67889998844445566678899999999999999999999999999999997 456667778899999999999999
Q ss_pred EEEEeCCC-CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 189 LYWTDSET-NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 189 LYwtd~~~-~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
|||+|... ++|++++++|..+++++...+..|+||++||.+++|||+|++ ..+|++++++| ..++.++...+.+|.
T Consensus 173 ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~-~~~I~~~~~dG--~~~~~~~~~~~~~P~ 249 (349)
T 3v64_C 173 IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK-HHVIERANLDG--SHRKAVISQGLPHPF 249 (349)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTS--CSCEEEECSSCSSEE
T ss_pred EEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECC-CCEEEEEeCCC--CceEEEEeCCCCCce
Confidence 99999988 999999999999998887789999999999999999999976 68999999999 788888888889999
Q ss_pred eEEEeccccEEEEeccceeeeeeec-cccceeee--eeecee-eeeeeec
Q psy13629 268 GIAIDFNNRLLYWIDGRLTFIEVMD-YDGYVRLV--TSLGHI-NLELYCN 313 (395)
Q Consensus 268 glalD~~~~rLYwaD~~~~~I~~~~-~dG~~~~~--t~~g~~-~i~Lf~d 313 (395)
||+++ +++|||+|+..++|.+++ .+|..+.. .....| ++++|..
T Consensus 250 giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~ 297 (349)
T 3v64_C 250 AITVF--EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHP 297 (349)
T ss_dssp EEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEECG
T ss_pred EEEEE--CCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEEEcc
Confidence 99996 789999999999999998 78877665 344555 7777744
No 13
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.96 E-value=4.4e-27 Score=227.06 Aligned_cols=198 Identities=19% Similarity=0.361 Sum_probs=171.6
Q ss_pred EEEEeeCCCCC-ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPL-KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~-~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
.|.++++++.. ....+...+..|.||++|+.++.|||+|...++|.+++++|. ....++...+..|.|||||+.++
T Consensus 58 ~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---~~~~l~~~~~~~P~giavdp~~g 134 (318)
T 3sov_A 58 AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS---LRKVLFWQELDQPRAIALDPSSG 134 (318)
T ss_dssp EEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEEGGGT
T ss_pred cEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC---cEEEEEeCCCCCccEEEEeCCCC
Confidence 57888888743 245666778899999999999999999999999999999997 45666668889999999999999
Q ss_pred eEEEEeCC-CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 188 KLYWTDSE-TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 188 ~LYwtd~~-~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
.|||+|.. .++|++++++|+.+++++...+..|+||++|+.+++|||+|+. ..+|+++++|| ..+++++...+..|
T Consensus 135 ~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~-~~~I~~~d~dG--~~~~~~~~~~~~~P 211 (318)
T 3sov_A 135 FMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK-LNFIHKSNLDG--TNRQAVVKGSLPHP 211 (318)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTS--CSCEEEECSCCSCE
T ss_pred EEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECC-CCEEEEEcCCC--CceEEEecCCCCCc
Confidence 99999965 7899999999999998887789999999999999999999955 78999999999 78888887778899
Q ss_pred eeEEEeccccEEEEeccceeeeeeecc-ccceeee--eeecee-eeeeeecc
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDY-DGYVRLV--TSLGHI-NLELYCNV 314 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~-dG~~~~~--t~~g~~-~i~Lf~d~ 314 (395)
.||++| +++|||+|+..++|.+++. +|..... ....+| .+++|...
T Consensus 212 ~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v~~~~ 261 (318)
T 3sov_A 212 FALTLF--EDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQ 261 (318)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEEECGG
T ss_pred eEEEEe--CCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEEeccc
Confidence 999998 7899999999999999998 6766544 444566 88888654
No 14
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.96 E-value=4e-27 Score=251.96 Aligned_cols=199 Identities=22% Similarity=0.333 Sum_probs=166.2
Q ss_pred EEEEeeCCCC----CccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRP----LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~----~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|+++++++. ....++...+..|.|||+|+.+++|||+|...++|.+++++|. .+.+++...+..|.|||||+
T Consensus 447 ~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~---~~~~l~~~~l~~P~gIaVDp 523 (791)
T 3m0c_C 447 MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDP 523 (791)
T ss_dssp EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEECTTCCEEEEEEET
T ss_pred eEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC---eEEEEEeCCCCCcceEEEec
Confidence 5778888762 2234444588999999999999999999999999999999997 56777778899999999999
Q ss_pred CCCeEEEEeCCC-CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecC-
Q psy13629 185 LTEKLYWTDSET-NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDST- 262 (395)
Q Consensus 185 ~~~~LYwtd~~~-~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~- 262 (395)
.+++|||||.+. ++|++++++|+.+++++...+.+|+|||||+.+++|||+|++ ..+|++++++| ..+++++...
T Consensus 524 ~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~-~~~I~~~d~dG--~~~~~v~~~~~ 600 (791)
T 3m0c_C 524 VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNG--GNRKTILEDEK 600 (791)
T ss_dssp TTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTS--CSCEEEEECTT
T ss_pred CCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC-CCcEEEEecCC--CceEEEecCCC
Confidence 999999999876 899999999999999998889999999999999999999965 78999999999 7888888764
Q ss_pred -CcCceeEEEeccccEEEEeccceeeeeeec-cccceeee--eeecee-eeeeeeccC
Q psy13629 263 -IFWPNGIAIDFNNRLLYWIDGRLTFIEVMD-YDGYVRLV--TSLGHI-NLELYCNVF 315 (395)
Q Consensus 263 -~~~P~glalD~~~~rLYwaD~~~~~I~~~~-~dG~~~~~--t~~g~~-~i~Lf~d~a 315 (395)
+.+|.||++ ++++|||+|+..++|.+++ .+|..+.. ..+..+ .|.+|....
T Consensus 601 ~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~ 656 (791)
T 3m0c_C 601 RLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLT 656 (791)
T ss_dssp TTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGG
T ss_pred ccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeecccc
Confidence 445555555 5889999999999999998 67766655 345556 888886543
No 15
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.95 E-value=1.3e-26 Score=230.71 Aligned_cols=198 Identities=22% Similarity=0.332 Sum_probs=167.8
Q ss_pred EEEEeeCCCC----CccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRP----LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~----~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|+++++++. .....+...+..|.||++|+.+++|||+|...++|.+++++|. ...+++...+..|.|||||+
T Consensus 135 ~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~---~~~~l~~~~~~~P~~iavdp 211 (400)
T 3p5b_L 135 MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDP 211 (400)
T ss_dssp EEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC---SEEEEEECSSCCEEEEEEET
T ss_pred eEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC---ceEEEEeCCCCCcceEEEec
Confidence 5777888762 2344555588999999999999999999999999999999997 56777778899999999999
Q ss_pred CCCeEEEEeCC-CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec--
Q psy13629 185 LTEKLYWTDSE-TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS-- 261 (395)
Q Consensus 185 ~~~~LYwtd~~-~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~-- 261 (395)
.++.|||+|.. .++|++++++|..+++++...+..|+|||+|+.+++|||+|+. ..+|++++++| ..+++++..
T Consensus 212 ~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~-~~~I~~~d~dG--~~~~~~~~~~~ 288 (400)
T 3p5b_L 212 VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNG--GNRKTILEDEK 288 (400)
T ss_dssp TTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTS--CCCEEEEECSS
T ss_pred ccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC-CCEEEEEeCCC--CccEEEEeCCC
Confidence 99999999976 4899999999999999987889999999999999999999955 78999999999 788888764
Q ss_pred CCcCceeEEEeccccEEEEeccceeeeeeec-cccceeee--eeecee-eeeeeecc
Q psy13629 262 TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMD-YDGYVRLV--TSLGHI-NLELYCNV 314 (395)
Q Consensus 262 ~~~~P~glalD~~~~rLYwaD~~~~~I~~~~-~dG~~~~~--t~~g~~-~i~Lf~d~ 314 (395)
.+.+|.||+++ +++|||+|+..++|.+++ .+|..+.. ....+| .+.+|...
T Consensus 289 ~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~ 343 (400)
T 3p5b_L 289 RLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNL 343 (400)
T ss_dssp TTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESGG
T ss_pred CCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEeec
Confidence 46789999886 889999999999999998 78877655 344555 78887554
No 16
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.95 E-value=5.1e-27 Score=232.40 Aligned_cols=197 Identities=24% Similarity=0.419 Sum_probs=171.8
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|.++++++.....++...+..|.||++|+.+++|||+|...++|.+++++|. ....++...+..|+|||||+.++.
T Consensus 139 ~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~---~~~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 139 RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---HRKVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp EEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC---SCEEEECSSCSCEEEEEEETTTTE
T ss_pred cEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC---ceEEeecCCCCCCcEEEEEcCCCe
Confidence 67889988844445566778899999999999999999999999999999987 556677778899999999999999
Q ss_pred EEEEeCCC-CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 189 LYWTDSET-NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 189 LYwtd~~~-~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
|||+|... ++|++++++|+.+++++...+..|+||++||.+++|||+|++ ..+|++++++| ..++.++...+.+|.
T Consensus 216 ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~-~~~I~~~d~dG--~~~~~~~~~~~~~P~ 292 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK-HHVIERANLDG--SHRKAVISQGLPHPF 292 (386)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETT-TTEEEEECTTS--CSCEEEECSSCSSEE
T ss_pred EEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECC-CCEEEEEeCCC--CeeEEEEECCCCCce
Confidence 99999887 999999999999999987789999999999999999999965 78999999999 788888888888999
Q ss_pred eEEEeccccEEEEeccceeeeeeec-cccceeee--eeecee-eeeeeec
Q psy13629 268 GIAIDFNNRLLYWIDGRLTFIEVMD-YDGYVRLV--TSLGHI-NLELYCN 313 (395)
Q Consensus 268 glalD~~~~rLYwaD~~~~~I~~~~-~dG~~~~~--t~~g~~-~i~Lf~d 313 (395)
||+++ +++|||+|+..++|.+++ .+|..+.. .....| ++.+|..
T Consensus 293 giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~ 340 (386)
T 3v65_B 293 AITVF--EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHP 340 (386)
T ss_dssp EEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEESG
T ss_pred EEEEE--CCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEEEch
Confidence 99996 789999999999999998 78877665 334455 7777643
No 17
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.95 E-value=1.4e-25 Score=209.53 Aligned_cols=188 Identities=27% Similarity=0.514 Sum_probs=160.0
Q ss_pred EEEEEeeCCCCCcc-----EEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEE
Q psy13629 108 LDIRIANLSRPLKP-----VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAI 182 (395)
Q Consensus 108 ~~I~~~~l~~~~~~-----~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAV 182 (395)
+.|+++++++.... ..+....+++.|+++|+.++.|||+|...++|.+++++|. ....++..++..|.+|++
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~p~~ia~ 86 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG---EPTTIIRQDLGSPEGIAL 86 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC---CCEEEECTTCCCEEEEEE
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCC---CcEEEEECCCCCccEEEE
Confidence 47888998873211 1222235678999999999999999999999999999986 345555566789999999
Q ss_pred ecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCC-CCeEEEEecCCCCcceEEEEec
Q psy13629 183 DWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGE-VPKIERGAMNGDPRHRKVIVDS 261 (395)
Q Consensus 183 D~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~-~~~I~~~~~dG~~~~~~~lv~~ 261 (395)
|+.+++|||+|...++|.+++++|..++.++...+..|++|++||.+++|||+|++. ..+|+++++|| ...+++...
T Consensus 87 d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg--~~~~~~~~~ 164 (267)
T 1npe_A 87 DHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--TNRRILAQD 164 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--CCCEEEECT
T ss_pred EecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC--CCcEEEEEC
Confidence 999999999999999999999999988887766678999999999999999999763 57999999999 667777767
Q ss_pred CCcCceeEEEeccccEEEEeccceeeeeeeccccceeee
Q psy13629 262 TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 262 ~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
.+.+|+||++|..+++|||+|...++|.+++++|..+..
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 203 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK 203 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE
T ss_pred CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE
Confidence 778999999998899999999999999999999876544
No 18
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.95 E-value=1.2e-25 Score=216.45 Aligned_cols=198 Identities=22% Similarity=0.333 Sum_probs=164.1
Q ss_pred EEEEeeCCC----CCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSR----PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~----~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|.++++++ ......+...+..|.||++|+.+++|||+|...++|.+++++|. ...+++...+..|++||||+
T Consensus 53 ~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~P~~iavdp 129 (316)
T 1ijq_A 53 MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDP 129 (316)
T ss_dssp EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEECTTCCEEEEEEET
T ss_pred cEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC---ceEEEEECCCCCcceEEeCC
Confidence 678888876 22233344567889999999999999999999999999999986 45666667889999999999
Q ss_pred CCCeEEEEeCCC-CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec--
Q psy13629 185 LTEKLYWTDSET-NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS-- 261 (395)
Q Consensus 185 ~~~~LYwtd~~~-~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~-- 261 (395)
.+++|||+|... ++|++++++|+.+++++...+..|+||++|+.+++|||+|+. ..+|++++++| ..+++++..
T Consensus 130 ~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~-~~~I~~~d~dg--~~~~~~~~~~~ 206 (316)
T 1ijq_A 130 VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNG--GNRKTILEDEK 206 (316)
T ss_dssp TTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTS--CSCEEEEECTT
T ss_pred CCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECC-CCeEEEEecCC--CceEEEeecCC
Confidence 999999999875 899999999999988887779999999999999999999955 78999999999 778887764
Q ss_pred CCcCceeEEEeccccEEEEeccceeeeeeecc-ccceeee--eeecee-eeeeeecc
Q psy13629 262 TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY-DGYVRLV--TSLGHI-NLELYCNV 314 (395)
Q Consensus 262 ~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~-dG~~~~~--t~~g~~-~i~Lf~d~ 314 (395)
.+.+|.||++| +++|||+|+..++|.+++. +|..... ..+..| .+.++...
T Consensus 207 ~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~~~~~p~~i~v~~~~ 261 (316)
T 1ijq_A 207 RLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNL 261 (316)
T ss_dssp TTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGG
T ss_pred ccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcceEEEecCCCCceEEEEeccc
Confidence 47789999997 6899999999999999996 6765544 334455 77777543
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.92 E-value=1.2e-22 Score=189.72 Aligned_cols=199 Identities=22% Similarity=0.373 Sum_probs=161.8
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|.++++++......+...+..|.+|++|+.++.|||+|...++|.+++++|. ....+...++..|++|++|+.+++
T Consensus 59 ~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~~~~~P~~i~vd~~~g~ 135 (267)
T 1npe_A 59 SIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT---QRRVLFDTGLVNPRGIVTDPVRGN 135 (267)
T ss_dssp EEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEETTTTE
T ss_pred EEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC---CEEEEEECCCCCccEEEEeeCCCE
Confidence 67888888743333344566899999999999999999999999999999986 345555566789999999998999
Q ss_pred EEEEeCC--CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 189 LYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 189 LYwtd~~--~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
|||+|.. .++|.+++++|...+++....+..|++|++|+.+++|||+|++ ..+|.+++++| ..++.++. ....|
T Consensus 136 lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~-~~~I~~~~~~g--~~~~~~~~-~~~~P 211 (267)
T 1npe_A 136 LYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAG-THRAECLNPAQ--PGRRKVLE-GLQYP 211 (267)
T ss_dssp EEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTE--EEEEEEEE-CCCSE
T ss_pred EEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECC-CCEEEEEecCC--CceEEEec-CCCCc
Confidence 9999976 6899999999998887776678899999999999999999965 78999999998 55555554 56789
Q ss_pred eeEEEeccccEEEEeccceeeeeeeccc-cceeeeeeec---ee-eeeeeeccCC
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYD-GYVRLVTSLG---HI-NLELYCNVFP 316 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~d-G~~~~~t~~g---~~-~i~Lf~d~ap 316 (395)
.||++| +++|||+|+..++|.+++.+ |........+ .+ .+++.++.+|
T Consensus 212 ~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~~ 264 (267)
T 1npe_A 212 FAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQCP 264 (267)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC-
T ss_pred eEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccCC
Confidence 999998 78999999999999999987 4444332222 35 8887777665
No 20
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=99.92 E-value=6.7e-26 Score=196.05 Aligned_cols=102 Identities=50% Similarity=0.852 Sum_probs=95.8
Q ss_pred ccceeeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCC
Q psy13629 294 DGYVRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNY 373 (395)
Q Consensus 294 dG~~~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~ 373 (395)
......+|..|.+.++||.+.+|.|++||++||+.+||+|+.|||++++|+|||||+.++|.|+++++|..|++|+.+.+
T Consensus 5 ~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l 84 (160)
T 2fu0_A 5 PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHL 84 (160)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTB
T ss_pred CCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCCcccCCCccccccCCc
Confidence 34455568899999999999999999999999999999999999999999999999999999999999999999987789
Q ss_pred CCCCCeEEEeecCCCCCCCCCC
Q psy13629 374 THTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 374 ~~~~~G~l~ma~~~~~~~~sqf 395 (395)
+|.++|+|||||++||+|||||
T Consensus 85 ~h~~~G~lsmA~~gp~s~~SQF 106 (160)
T 2fu0_A 85 NHSKPFMVSMANCGPNTNGSQF 106 (160)
T ss_dssp CSSSSSEEEECCSSTTCBCSCE
T ss_pred ccCCceEEEEecCCCCCcccEE
Confidence 9998999999999999999998
No 21
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=99.91 E-value=1.6e-25 Score=194.91 Aligned_cols=98 Identities=63% Similarity=1.080 Sum_probs=93.6
Q ss_pred eeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCCC
Q psy13629 298 RLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTG 377 (395)
Q Consensus 298 ~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~~ 377 (395)
..++..|.+.++||.+.+|.|++||++||+.+||+|+.|||++++|+|||||++++|.|+++++|..|++|+.+.++|.+
T Consensus 15 ~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~ 94 (166)
T 2x7k_A 15 YLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTG 94 (166)
T ss_dssp EEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTSCCCS
T ss_pred EEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCccccccccccCCCC
Confidence 34478999999999999999999999999999999999999999999999999999999999999999999878999999
Q ss_pred CeEEEeecCCCCCCCCCC
Q psy13629 378 RGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 378 ~G~l~ma~~~~~~~~sqf 395 (395)
+|+|||||.+||+|||||
T Consensus 95 ~G~lsmAn~gp~s~gSQF 112 (166)
T 2x7k_A 95 AGILAMANAGPDTNGSQF 112 (166)
T ss_dssp TTEEEECBSSTTCBCSCE
T ss_pred CeEEEEeeCCCCCccceE
Confidence 999999999999999998
No 22
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=99.91 E-value=1.6e-25 Score=194.19 Aligned_cols=97 Identities=60% Similarity=1.112 Sum_probs=93.1
Q ss_pred eeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCCCC
Q psy13629 299 LVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTGR 378 (395)
Q Consensus 299 ~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~~~ 378 (395)
.+|..|.+.++||.+.+|.|++||++||+.+||+|+.|||++++|+|||||+.++|+|+++++|..+++|..+.++|+.+
T Consensus 5 ~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~~ 84 (161)
T 2ok3_A 5 LHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKHNVR 84 (161)
T ss_dssp EEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCCSCST
T ss_pred EEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCCcccCCccccccCcCcCcCCC
Confidence 34789999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred eEEEeecCCCCCCCCCC
Q psy13629 379 GVLSMANSGPNTNTSQL 395 (395)
Q Consensus 379 G~l~ma~~~~~~~~sqf 395 (395)
|+|||||++||+|||||
T Consensus 85 G~lsma~~gp~s~~SQF 101 (161)
T 2ok3_A 85 GVVSMANNGPNTNGSQF 101 (161)
T ss_dssp TEEEECCSSTTCBCSCE
T ss_pred eEEEEecCCCCCcceEE
Confidence 99999999999999998
No 23
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.91 E-value=3.1e-25 Score=197.33 Aligned_cols=100 Identities=73% Similarity=1.319 Sum_probs=95.0
Q ss_pred ceeeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCC
Q psy13629 296 YVRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTH 375 (395)
Q Consensus 296 ~~~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~ 375 (395)
....+|..|.+.++||.+.+|.|++||++||+.|||+|+.|||++++|+|||||++++|.|+++++|..|++|+.+.++|
T Consensus 21 ~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~si~g~~f~dE~~~~l~h 100 (197)
T 1zkc_A 21 YVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSH 100 (197)
T ss_dssp EEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCCBTTBSCBCCCCCTTCCS
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCCccCCCccccccCcCcCC
Confidence 34455889999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred CCCeEEEeecCCCCCCCCCC
Q psy13629 376 TGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 376 ~~~G~l~ma~~~~~~~~sqf 395 (395)
+.+|+|||||++||+|||||
T Consensus 101 ~~~G~lsMAn~gp~sngSQF 120 (197)
T 1zkc_A 101 TGRGILSMANSGPNSNRSQF 120 (197)
T ss_dssp CSTTEEEECCSSTTCBCSCE
T ss_pred CCceEEEEecCCCCCcccEE
Confidence 99999999999999999998
No 24
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.91 E-value=2.1e-24 Score=229.11 Aligned_cols=199 Identities=22% Similarity=0.320 Sum_probs=163.1
Q ss_pred EEEEEeeCCC----CCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEe
Q psy13629 108 LDIRIANLSR----PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAID 183 (395)
Q Consensus 108 ~~I~~~~l~~----~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD 183 (395)
+.|+++++++ ......+...+..|.||++|+.+++|||+|...++|.+++++|. ...+++...+..|+|||||
T Consensus 428 ~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~---~~~~l~~~~~~~P~giavD 504 (699)
T 1n7d_A 428 RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFREQGSKPRAIVVD 504 (699)
T ss_dssp TSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC---CEEEECCCSSCCCCCEECC
T ss_pred CeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC---ceEEEEeCCCCCcceEEEc
Confidence 3678888875 23333444567889999999999999999999999999999986 4556666678899999999
Q ss_pred cCCCeEEEEeCCC-CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec-
Q psy13629 184 WLTEKLYWTDSET-NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS- 261 (395)
Q Consensus 184 ~~~~~LYwtd~~~-~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~- 261 (395)
+.+++|||+|... ++|++++++|+.+++++...+..|+|||+||.+++|||+|++ ..+|++++++| ..+++++..
T Consensus 505 p~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~-~~~I~~~d~dG--~~~~~~~~~~ 581 (699)
T 1n7d_A 505 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNG--GNRKTILEDE 581 (699)
T ss_dssp SSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT-TTEEEEECSSS--SCCEEECCCS
T ss_pred cCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC-CCeEEEEccCC--CceEEEEecC
Confidence 9999999999775 899999999999888876779999999999999999999955 78999999999 788888763
Q ss_pred -CCcCceeEEEeccccEEEEeccceeeeeeecc-ccceeee--eeecee-eeeeeecc
Q psy13629 262 -TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY-DGYVRLV--TSLGHI-NLELYCNV 314 (395)
Q Consensus 262 -~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~-dG~~~~~--t~~g~~-~i~Lf~d~ 314 (395)
.+.+|.||++| +++|||+|+..++|.+++. +|..+.+ ..+.+| .|.++...
T Consensus 582 ~~~~~P~glavd--~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~ 637 (699)
T 1n7d_A 582 KRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQL 637 (699)
T ss_dssp SSCSSCCCCEEE--TTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSS
T ss_pred CcCCCceEeEEE--CCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcc
Confidence 46789999998 5799999999999999986 5665554 234445 77777543
No 25
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=99.91 E-value=4.3e-25 Score=196.43 Aligned_cols=98 Identities=58% Similarity=1.021 Sum_probs=93.7
Q ss_pred eeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCCC
Q psy13629 298 RLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTG 377 (395)
Q Consensus 298 ~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~~ 377 (395)
...+..|.+.++||.+.+|.|++||++||+.|||+|+.|||++++|+|||||++++|.|+++++|..|++|+.+.++|+.
T Consensus 42 ~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~ 121 (196)
T 2b71_A 42 TIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKELKHTG 121 (196)
T ss_dssp EEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCCBTTBSCBCCCCCTTCCCCS
T ss_pred EEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccCCcCcCC
Confidence 34488999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred CeEEEeecCCCCCCCCCC
Q psy13629 378 RGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 378 ~G~l~ma~~~~~~~~sqf 395 (395)
+|+|||||.+||+|||||
T Consensus 122 ~G~lsMAn~gpns~gSQF 139 (196)
T 2b71_A 122 AGILSMSNNGPNTNSSQF 139 (196)
T ss_dssp TTEEEECCSSTTCBSSCE
T ss_pred CeEEEEccCCCCCcccEE
Confidence 999999999999999998
No 26
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.91 E-value=3.9e-25 Score=193.92 Aligned_cols=98 Identities=58% Similarity=0.930 Sum_probs=93.5
Q ss_pred eeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCCC
Q psy13629 298 RLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTG 377 (395)
Q Consensus 298 ~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~~ 377 (395)
...+..|.+.++||.+.+|.|++||++||+.+||+|+.|||++++|+|||||+.++|.|+++++|..|++|+.+.++|.+
T Consensus 25 ~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~ 104 (176)
T 2a2n_A 25 IIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDR 104 (176)
T ss_dssp EEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCCSCS
T ss_pred EEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCCCCcccCCccccccccccccCC
Confidence 34488999999999999999999999999999999999999999999999999999999999999999999877899998
Q ss_pred CeEEEeecCCCCCCCCCC
Q psy13629 378 RGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 378 ~G~l~ma~~~~~~~~sqf 395 (395)
+|+|||||.+||+|||||
T Consensus 105 ~G~lsmA~~gp~s~gSQF 122 (176)
T 2a2n_A 105 PYTLSMANAGSNTNGSQF 122 (176)
T ss_dssp SSEEEECCSSTTCBCSCE
T ss_pred ceEEEEEeCCCCCcccEE
Confidence 999999999999999998
No 27
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=99.90 E-value=4.5e-25 Score=194.87 Aligned_cols=99 Identities=49% Similarity=0.961 Sum_probs=93.8
Q ss_pred eeeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 297 VRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 297 ~~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
....+..|.+.++||.+.+|.|++||++||+.+||+|+.|||++++|+|||||++++|.|+++++|..|++|+.+.++|+
T Consensus 27 V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h~ 106 (185)
T 2hq6_A 27 VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFN 106 (185)
T ss_dssp EEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTBCSC
T ss_pred EEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCCcccCCccccccccCcccC
Confidence 34457889999999999999999999999999999999999999999999999999999999999999999987789999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
.+|+|||||++||+|||||
T Consensus 107 ~~G~lsMA~~g~~s~gSQF 125 (185)
T 2hq6_A 107 RRGLVAMANAGSHDNGSQF 125 (185)
T ss_dssp SSSEEEECCSSTTCBCSCE
T ss_pred CCeEEEEccCCCCCccceE
Confidence 9999999999999999998
No 28
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=99.90 E-value=7.4e-25 Score=193.65 Aligned_cols=98 Identities=53% Similarity=1.044 Sum_probs=93.5
Q ss_pred eeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCCC
Q psy13629 298 RLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTG 377 (395)
Q Consensus 298 ~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~~ 377 (395)
...+..|.+.++||.+.+|.|++||++||+.+||+|+.|||++++|+|||||++++|.|+++++|..|++|+.+.++|++
T Consensus 20 ~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h~~ 99 (185)
T 2poe_A 20 RIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEIYPELKYDR 99 (185)
T ss_dssp EEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCCBTTBSCBCCCCCTTSCCCS
T ss_pred EEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCcccccccCCCccCC
Confidence 33478999999999999999999999999999999999999999999999999999999999999999999878999999
Q ss_pred CeEEEeecCC----CCCCCCCC
Q psy13629 378 RGVLSMANSG----PNTNTSQL 395 (395)
Q Consensus 378 ~G~l~ma~~~----~~~~~sqf 395 (395)
+|+|||||++ ||+|||||
T Consensus 100 ~G~lsmA~~g~~~~p~s~gSQF 121 (185)
T 2poe_A 100 RGILSMASKGASKKPNTNGSQF 121 (185)
T ss_dssp TTEEEECCSCC-CCCSCBCSCE
T ss_pred CeEEEEecCCCCCCCCCccceE
Confidence 9999999999 99999998
No 29
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=99.90 E-value=1.5e-24 Score=193.55 Aligned_cols=98 Identities=63% Similarity=1.080 Sum_probs=93.7
Q ss_pred eeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCCC
Q psy13629 298 RLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTG 377 (395)
Q Consensus 298 ~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~~ 377 (395)
..++..|.+.++||.+.+|.|++||++||+.+||+++.|||++++|+||+||+.++|.+++++++..|++|+.+.++|.+
T Consensus 15 ~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~si~g~~f~dE~~~~l~h~~ 94 (203)
T 2k7n_A 15 YLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTG 94 (203)
T ss_dssp EEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCCTTSCSCBCCCCCCSSCCCS
T ss_pred EEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccccccCCC
Confidence 34478999999999999999999999999999999999999999999999999999999999999999999878999999
Q ss_pred CeEEEeecCCCCCCCCCC
Q psy13629 378 RGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 378 ~G~l~ma~~~~~~~~sqf 395 (395)
+|+|||||.+||+|||||
T Consensus 95 ~G~lsMAn~gpnsngSQF 112 (203)
T 2k7n_A 95 AGILAMANAGPDTNGSQF 112 (203)
T ss_dssp SCEEEEEESSTTCEEEEE
T ss_pred CeEEEEeeCCCCCcccEE
Confidence 999999999999999998
No 30
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=99.90 E-value=1.6e-24 Score=194.22 Aligned_cols=101 Identities=48% Similarity=0.897 Sum_probs=88.5
Q ss_pred cceeeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEec-----CCCCCCCCCcccC-------C
Q psy13629 295 GYVRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGG-----DPTGTGTGGESIW-------G 362 (395)
Q Consensus 295 G~~~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g-----~~~~~g~~~~~~~-------~ 362 (395)
+....+|..|.+.++||.+.+|.|++||++||+.|||+|+.|||++++|+|||| |++++|.|+++++ |
T Consensus 7 ~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~~~~g 86 (201)
T 3bo7_A 7 GYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISGFPGG 86 (201)
T ss_dssp EEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCSSTTC
T ss_pred eEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCccccccccccCC
Confidence 344555889999999999999999999999999999999999999999999999 9999999999999 8
Q ss_pred CCCCCCCCCCCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 363 KPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 363 ~~~~~e~~~~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
..|++|+.+.++|+.+|+|||||++||+|||||
T Consensus 87 ~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQF 119 (201)
T 3bo7_A 87 APFEDEFDNRLVHQGIGVLSMANDGKHSNLSEF 119 (201)
T ss_dssp CCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCE
T ss_pred CcccCcccCCCCcCCCcEEEEeeCCCCCcccEE
Confidence 999999888999999999999999999999998
No 31
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.89 E-value=7.2e-24 Score=193.34 Aligned_cols=101 Identities=47% Similarity=0.863 Sum_probs=93.0
Q ss_pred cceeeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccC--CCCCCCCCCCC
Q psy13629 295 GYVRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIW--GKPFEDEFKPN 372 (395)
Q Consensus 295 G~~~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~--~~~~~~e~~~~ 372 (395)
+....+|..|.+.++||.+.+|.|++||++||+.+||+|+.|||++++|+|||||++++|+|+++++ |..|++|+.+.
T Consensus 22 ~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si~~~g~~f~dE~~~~ 101 (232)
T 3bkp_A 22 GKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDGKPFDVETHPR 101 (232)
T ss_dssp CEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCCCCTTTTCCBCCCCCTT
T ss_pred CEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCCccccCCCccCCccccC
Confidence 3445558899999999999999999999999999999999999999999999999999999999999 89999998888
Q ss_pred CCCCCCeEEEeecCCC--------------CCCCCCC
Q psy13629 373 YTHTGRGVLSMANSGP--------------NTNTSQL 395 (395)
Q Consensus 373 ~~~~~~G~l~ma~~~~--------------~~~~sqf 395 (395)
++|+.+|+|||||.++ |+|||||
T Consensus 102 l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQF 138 (232)
T 3bkp_A 102 LKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQF 138 (232)
T ss_dssp CCCCSTTEEEECCCC----------------CBCSCE
T ss_pred cCcCCCeEEEEeccCCcccccccccccccCCCcCCEE
Confidence 9999999999999997 6999998
No 32
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=99.89 E-value=9e-24 Score=183.73 Aligned_cols=94 Identities=55% Similarity=0.914 Sum_probs=89.1
Q ss_pred eeeceeeeeeeeccCCccccceeeeec--cce-ecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE--NGY-YNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~--~g~-y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
+..|++.++||.+.+|.|++||++||+ .+| |+|+.|||++++|+||+||++ ++|+|+++++|..|++| .+.++|.
T Consensus 15 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~l~h~ 93 (165)
T 2z6w_A 15 KPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDE-NFTLKHV 93 (165)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC-CCCSCCC
T ss_pred EeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcccCc-ccccccC
Confidence 578899999999999999999999999 999 999999999999999999985 78899999999999999 5789999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
++|+|||||.+||+|||||
T Consensus 94 ~~G~lsmA~~gp~s~~SQF 112 (165)
T 2z6w_A 94 GPGVLSMANAGPNTNGSQF 112 (165)
T ss_dssp STTEEEECCSSTTCBCSCE
T ss_pred CCCEEEEeeCCCCCcccEE
Confidence 8999999999999999998
No 33
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=99.89 E-value=1.1e-23 Score=186.86 Aligned_cols=95 Identities=49% Similarity=0.820 Sum_probs=88.2
Q ss_pred eeeeeeceeeeeeeeccCCccccceeeee---------------ccceecceeEEEEecCcEEEecCCCCCCCCCcccCC
Q psy13629 298 RLVTSLGHINLELYCNVFPKTCENFMKHC---------------ENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWG 362 (395)
Q Consensus 298 ~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~---------------~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~ 362 (395)
...+..|++.++||.+.+|.|++||++|| +.+||+|+.|||++++|+|||||+.++|+|+ +|
T Consensus 27 ~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~G~gg---~g 103 (191)
T 1w74_A 27 TLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGG---PG 103 (191)
T ss_dssp EEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSSSSCC---SS
T ss_pred EEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCCCCCC---CC
Confidence 34488999999999999999999999999 4689999999999999999999998888887 48
Q ss_pred CCCCCCCCCCCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 363 KPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 363 ~~~~~e~~~~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
..|++|+.+.++|+++|+|||||.+||+|||||
T Consensus 104 ~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQF 136 (191)
T 1w74_A 104 YKFADEFHPELQFDKPYLLAMANAGPGTNGSQF 136 (191)
T ss_dssp CCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCE
T ss_pred CccccccccCCCcCCCcEEEEeeCCCCCccceE
Confidence 889999888999999999999999999999998
No 34
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=99.88 E-value=1.2e-23 Score=183.94 Aligned_cols=94 Identities=53% Similarity=0.890 Sum_probs=88.2
Q ss_pred eeeceeeeeeeeccCCccccceeeeec--cce-ecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE--NGY-YNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~--~g~-y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
+..|.+.++||.+.+|.|++||++||+ .|| |+|+.|||++++|+|||||+. ++|+|+++++|..|++|. +.++|.
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~-~~l~h~ 100 (172)
T 2cmt_A 22 GDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDEN-FQLRHE 100 (172)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC-CCSCCC
T ss_pred eecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccCCCcccccc-cCcccC
Confidence 578899999999999999999999998 488 999999999999999999986 788999999999999994 588999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
++|+|||||.+||+|||||
T Consensus 101 ~~G~lsmA~~gp~t~gSQF 119 (172)
T 2cmt_A 101 GFGVLSMANSGPNTNGSQF 119 (172)
T ss_dssp STTEEEECCSSTTCBCSCE
T ss_pred CceEEEEeeCCCCCcccEE
Confidence 8999999999999999998
No 35
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=99.88 E-value=1.5e-23 Score=183.62 Aligned_cols=94 Identities=54% Similarity=0.885 Sum_probs=88.2
Q ss_pred eeeceeeeeeeeccCCccccceeeeec--cce-ecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE--NGY-YNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~--~g~-y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
+..|++.++||.+.+|.|++||++||+ .+| |+|+.|||++++|+|||||++ ++|+|+++++|..|++| .+.++|+
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~l~h~ 101 (173)
T 2r99_A 23 KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDE-NFILKHT 101 (173)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC-CCCSCCC
T ss_pred ccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCCCcccCc-ccCcccC
Confidence 578899999999999999999999995 788 999999999999999999986 68899999999999999 4688999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
++|+|||||.+||+|||||
T Consensus 102 ~~G~lsmA~~gp~t~gSQF 120 (173)
T 2r99_A 102 GPGLLSMANSGPNTNGSQF 120 (173)
T ss_dssp SSSEEEECCSSTTCBCSCE
T ss_pred CCcEEEEccCCCCCcccEE
Confidence 9999999999999999998
No 36
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=99.88 E-value=1.2e-23 Score=184.93 Aligned_cols=94 Identities=50% Similarity=0.907 Sum_probs=89.0
Q ss_pred eeeceeeeeeeeccCCccccceeeeeccce--------ecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCENGY--------YNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDEFKP 371 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~--------y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e~~~ 371 (395)
+..|++.++||.+.+|.|++||++||+.+| |+|+.|||++++|+|||||+. ++|+|+++++|+.|++|. .
T Consensus 22 t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~-~ 100 (177)
T 1mzw_A 22 QEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADEN-F 100 (177)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCCCTTSSCBCCCC-C
T ss_pred eeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCCccCCCcccCcc-c
Confidence 578899999999999999999999999998 999999999999999999985 789999999999999994 6
Q ss_pred CCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 372 NYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 372 ~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
.++|+++|+|||||.+||+|||||
T Consensus 101 ~l~h~~~G~lsmAn~gp~tngSQF 124 (177)
T 1mzw_A 101 KLRHSAPGLLSMANSGPSTNGCQF 124 (177)
T ss_dssp CSCCCSTTEEEECCSSTTCBCSCE
T ss_pred ccccCCCCEEEEccCCCCCcceEE
Confidence 889999999999999999999998
No 37
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=99.88 E-value=1.2e-23 Score=183.56 Aligned_cols=93 Identities=54% Similarity=0.888 Sum_probs=88.4
Q ss_pred eeeceeeeeeeeccCCccccceeeee--ccce-ecceeEEEEecCcEEEecC-CCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHC--ENGY-YNGTKFHRSIRNFMIQGGD-PTGTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~--~~g~-y~~~~~~r~~~~~~iq~g~-~~~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
+..|++.++||.+.+|.|++||++|| +.+| |+|+.|||++++|+||||| +.++|.|+++++|+.|++| .+.++|.
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~l~h~ 101 (172)
T 2haq_A 23 EPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADE-NLNVKHF 101 (172)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCSSSSCBCCC-CCCSCCC
T ss_pred EecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccccCCcccCc-CCCcccC
Confidence 57889999999999999999999999 7899 9999999999999999999 5688999999999999999 6789999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
+|+|||||++||+|||||
T Consensus 102 -~G~lsmAn~gp~tngSQF 119 (172)
T 2haq_A 102 -VGALSMANAGPNTNGSQF 119 (172)
T ss_dssp -TTEEEECCSSTTCBCSCE
T ss_pred -ceEEEEccCCCCCcccEE
Confidence 999999999999999998
No 38
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=99.88 E-value=2e-23 Score=183.64 Aligned_cols=94 Identities=55% Similarity=0.911 Sum_probs=87.8
Q ss_pred eeeceeeeeeeeccCCccccceeeeecc--------c---eecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCEN--------G---YYNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDE 368 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~~--------g---~y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e 368 (395)
+..|++.++||.+.+|.|++||++||+. + ||+|+.|||++++|+|||||++ ++|.|+++++|..|++|
T Consensus 18 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE 97 (177)
T 1a58_A 18 NLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDE 97 (177)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSCCCCTTSSCBCCC
T ss_pred EeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcccCc
Confidence 5788999999999999999999999984 4 8999999999999999999986 78999999999999999
Q ss_pred CCCCCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 369 FKPNYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 369 ~~~~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
. ..++|+++|+|||||++||+|||||
T Consensus 98 ~-~~~~h~~~G~lsmAn~gp~tngSQF 123 (177)
T 1a58_A 98 E-FVMKHDEPFVVSMANKGPNTNGSQF 123 (177)
T ss_dssp C-CCSCCCSSSEEEECCSSTTCBCSCE
T ss_pred c-cCcccCCCeEEEEeeCCCCCceeEE
Confidence 5 4788999999999999999999998
No 39
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=99.88 E-value=1.9e-23 Score=183.96 Aligned_cols=94 Identities=48% Similarity=0.780 Sum_probs=88.3
Q ss_pred eeeceeeeeeeeccCCccccceeeeec-----------cceecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE-----------NGYYNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDE 368 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~-----------~g~y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e 368 (395)
+..|++.++||.+.+|.|++||++||+ .+||+|+.|||++++|+||+||+. ++|+|+++++|..|++|
T Consensus 21 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE 100 (179)
T 2wfi_A 21 QPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDE 100 (179)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCC
T ss_pred ccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCCCCCcccCCccccc
Confidence 578899999999999999999999996 579999999999999999999986 78999999999999999
Q ss_pred CCCCCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 369 FKPNYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 369 ~~~~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
. +.++|+++|+|||||.+||+|||||
T Consensus 101 ~-~~~~h~~~G~lsMAn~gp~tngSQF 126 (179)
T 2wfi_A 101 S-FAVKHNKEFLLSMANRGKDTNGSQF 126 (179)
T ss_dssp C-CCSCCCSTTEEEECCSSTTCBCSCE
T ss_pred c-cCcCcCCCeEEEEEeCCCCCcceEE
Confidence 4 5789999999999999999999998
No 40
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=99.88 E-value=1.3e-23 Score=184.02 Aligned_cols=94 Identities=61% Similarity=0.950 Sum_probs=88.1
Q ss_pred eeeceeeeeeeeccCCccccceeeeecc--c--------eecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCEN--G--------YYNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDEF 369 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~~--g--------~y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e~ 369 (395)
+..|++.++||.+.+|.|++||++||+. | ||+|+.|||++++|+|||||+. ++|+|+++++|+.|++|.
T Consensus 15 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~siyg~~f~dE~ 94 (173)
T 2igv_A 15 KASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDEN 94 (173)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCC
T ss_pred EecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCCccCCCcccCcc
Confidence 4688899999999999999999999986 5 7999999999999999999986 789999999999999994
Q ss_pred CCCCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 370 KPNYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 370 ~~~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
+.++|.++|+|||||++||+|||||
T Consensus 95 -~~l~h~~~G~lsmAn~gp~tngSQF 119 (173)
T 2igv_A 95 -FKEKHTGPGVLSMANAGPNTNGSQF 119 (173)
T ss_dssp -CCSCCCSTTEEEECCSSTTCBSSCE
T ss_pred -cccCCCCCeEEEEeeCCCCCcceEE
Confidence 6899999999999999999999998
No 41
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=99.88 E-value=2.6e-23 Score=184.68 Aligned_cols=94 Identities=48% Similarity=0.832 Sum_probs=88.2
Q ss_pred eeeceeeeeeeeccCCccccceeeeec-----------cceecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE-----------NGYYNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDE 368 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~-----------~g~y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e 368 (395)
+..|++.++||.+.+|.|++||++||+ .+||+|+.|||++++|+|||||+. ++|.|+++++|..|++|
T Consensus 31 t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G~gg~siyg~~f~dE 110 (192)
T 2he9_A 31 EPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDE 110 (192)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCC
T ss_pred EecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCCCCCCcccCCcccCc
Confidence 578899999999999999999999995 579999999999999999999986 78999999999999999
Q ss_pred CCCCCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 369 FKPNYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 369 ~~~~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
. +.++|+++|+|||||.+||+|||||
T Consensus 111 ~-~~l~h~~~G~lsMAn~gp~tngSQF 136 (192)
T 2he9_A 111 N-FILKHDRAFLLSMANRGKHTNGSQF 136 (192)
T ss_dssp C-CCSCCCSTTEEEECCSSTTCBCSCE
T ss_pred c-ccCCCCCCeEEEEEeCCCCCcceEE
Confidence 4 6789999999999999999999998
No 42
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=99.88 E-value=1.5e-23 Score=183.28 Aligned_cols=94 Identities=52% Similarity=0.930 Sum_probs=88.2
Q ss_pred eeeceeeeeeeeccCCccccceeeeec-cce--------ecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE-NGY--------YNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDEFK 370 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~-~g~--------y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e~~ 370 (395)
+..|++.++||.+.+|.|++||++||+ .+| |+|+.|||++++|+||+||+. ++|+|+++++|+.|++| .
T Consensus 15 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~ 93 (170)
T 1qng_A 15 SNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSFTDE-N 93 (170)
T ss_dssp SEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC-C
T ss_pred EeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCCccccCCccccc-c
Confidence 467889999999999999999999998 589 999999999999999999985 78999999999999999 4
Q ss_pred CCCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 371 PNYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 371 ~~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
+.++|+++|+|||||.+||+|||||
T Consensus 94 ~~l~h~~~G~lsmAn~gp~tngSQF 118 (170)
T 1qng_A 94 FNMKHDQPGLLSMANAGPNTNSSQF 118 (170)
T ss_dssp CCSCCCSTTEEEECCSSTTCBCSCE
T ss_pred cccccCCCCEEEEeecCCCCcccEE
Confidence 6889999999999999999999998
No 43
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.88 E-value=1.8e-23 Score=185.23 Aligned_cols=94 Identities=47% Similarity=0.860 Sum_probs=88.8
Q ss_pred eeeceeeeeeeeccCCccccceeeeec--cce-ecceeEEEEecCcEEEecC-CCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE--NGY-YNGTKFHRSIRNFMIQGGD-PTGTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~--~g~-y~~~~~~r~~~~~~iq~g~-~~~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
+..|++.++||.+.+|.|++||++||+ .|| |+|+.|||++++|+||||| +.++|.|+++++|+.|++| .+.++|+
T Consensus 27 t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~l~h~ 105 (188)
T 3ich_A 27 EDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHY 105 (188)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC-CCCSCCC
T ss_pred EeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCccccCCccccc-ccCcccC
Confidence 578899999999999999999999995 789 9999999999999999999 6788999999999999999 6788999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
++|+|||||.+||+|||||
T Consensus 106 ~~G~lsmAn~gp~tngSQF 124 (188)
T 3ich_A 106 GPGWVSMANAGKDTNGSQF 124 (188)
T ss_dssp STTEEEECCSSTTCBCSCE
T ss_pred CCeEEEEccCCCCCcccEE
Confidence 9999999999999999998
No 44
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=99.88 E-value=3.1e-23 Score=180.40 Aligned_cols=94 Identities=48% Similarity=0.805 Sum_probs=89.6
Q ss_pred eeeceeeeeeeeccCCccccceeeeec--cce-ecceeEEEEecCcEEEecC-CCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE--NGY-YNGTKFHRSIRNFMIQGGD-PTGTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~--~g~-y~~~~~~r~~~~~~iq~g~-~~~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
+..|++.++||.+.+|.|++||++||+ .+| |+|+.|||++++|+||+|| +.++|.|+++++|+++++| .+.++|.
T Consensus 14 t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~dE-~~~l~h~ 92 (164)
T 3pmp_A 14 KPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEKFADE-NFQVKHT 92 (164)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC-CCCSCCC
T ss_pred EEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcccccc-ccccCcC
Confidence 678999999999999999999999999 889 9999999999999999999 6689999999999999999 6789999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
++|+|||||.+||+|||||
T Consensus 93 ~~G~lsma~~g~~t~~SQF 111 (164)
T 3pmp_A 93 KPGLLSMANAGANTNGSQF 111 (164)
T ss_dssp STTEEEECBSSTTCBCSCE
T ss_pred CCcEEEEeeCCCCCcccEE
Confidence 9999999999999999998
No 45
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=99.87 E-value=4.4e-23 Score=182.32 Aligned_cols=94 Identities=56% Similarity=0.889 Sum_probs=87.2
Q ss_pred eeeceeeeeeeeccCCccccceeeeec--cce--------ecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE--NGY--------YNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDEF 369 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~--~g~--------y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e~ 369 (395)
+..|++.++||.+.+|.|++||++||+ .|| |+|+.|||++++|+||+||++ ++|+|+++++|+.|++|.
T Consensus 31 t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~gg~si~g~~f~dE~ 110 (186)
T 2poy_A 31 TPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYGSKFRDEN 110 (186)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCCTTC-CBCCCC
T ss_pred EecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCCCCccCCCcccCcc
Confidence 468889999999999999999999996 588 999999999999999999986 788999999999999994
Q ss_pred CCCCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 370 KPNYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 370 ~~~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
+.++|.++|+|||||.+||+|||||
T Consensus 111 -~~l~h~~~G~lsMAn~gpntngSQF 135 (186)
T 2poy_A 111 -FVYTHDAPFLLSMANAGPNTNGSQF 135 (186)
T ss_dssp -CCSCCCSTTEEEECCSSTTCBCSCE
T ss_pred -cccccCCCcEEEEeeCCCCCcccEE
Confidence 6889999999999999999999998
No 46
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=99.87 E-value=5.9e-23 Score=186.39 Aligned_cols=94 Identities=50% Similarity=0.836 Sum_probs=88.5
Q ss_pred eeeceeeeeeeeccCCccccceeeeeccc--------eecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCENG--------YYNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDEFKP 371 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g--------~y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e~~~ 371 (395)
+..|++.++||.+.+|.|++||++||+.+ ||+|+.|||++++|+|||||++ ++|+|+++++|+.|++| .+
T Consensus 71 t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~siyg~~f~dE-~~ 149 (229)
T 1z81_A 71 NFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLSIYGEKFDDE-NF 149 (229)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCCCBTTBSCCCCC-CC
T ss_pred eecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCCccCCCccccc-cc
Confidence 46889999999999999999999999987 7999999999999999999985 88999999999999999 46
Q ss_pred CCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 372 NYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 372 ~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
.++|+++|+|||||.+||+|||||
T Consensus 150 ~l~h~~~G~LsMAn~gpntngSQF 173 (229)
T 1z81_A 150 DIKHDKEGLLSMANSGPNTNGCQF 173 (229)
T ss_dssp CSCCCSTTEEEECCSSSSCCCSCE
T ss_pred ccccCCCcEEEeccCCCCCcccEE
Confidence 889999999999999999999998
No 47
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=99.87 E-value=6.4e-24 Score=185.78 Aligned_cols=97 Identities=51% Similarity=0.850 Sum_probs=62.7
Q ss_pred eeeeeeceeeeeeeeccCCccccceeeeec--cce-ecceeEEEEecCcEEEecC-CCCCCCCCcccCCCCCCCCCCCCC
Q psy13629 298 RLVTSLGHINLELYCNVFPKTCENFMKHCE--NGY-YNGTKFHRSIRNFMIQGGD-PTGTGTGGESIWGKPFEDEFKPNY 373 (395)
Q Consensus 298 ~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~--~g~-y~~~~~~r~~~~~~iq~g~-~~~~g~~~~~~~~~~~~~e~~~~~ 373 (395)
...|+.|++.++||.+.+|.|++||++||+ .|+ |+++.|||++++|+||||| +.++|+|+++++|+.|++| .+.+
T Consensus 16 ~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~~ 94 (172)
T 2c3b_A 16 TAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADE-NFSR 94 (172)
T ss_dssp CSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC-----------------------CH
T ss_pred ceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcccCc-cccc
Confidence 344778999999999999999999999999 778 9999999999999999999 7788999999999999999 6678
Q ss_pred CCCCCeEEEeecCCCCCCCCCC
Q psy13629 374 THTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 374 ~~~~~G~l~ma~~~~~~~~sqf 395 (395)
+|+++|+|||||.+||+|||||
T Consensus 95 ~h~~~G~lsmA~~gp~t~gSQF 116 (172)
T 2c3b_A 95 KHDKKGILSMANAGPNTNGSQF 116 (172)
T ss_dssp HHHHTCEEEEC---------CE
T ss_pred ccCCCeEEEEeeCCCCCcccEE
Confidence 8999999999999999999998
No 48
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.86 E-value=1.3e-20 Score=180.42 Aligned_cols=200 Identities=12% Similarity=0.126 Sum_probs=156.8
Q ss_pred eEEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEE---CCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEe
Q psy13629 107 LLDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTD---HGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAID 183 (395)
Q Consensus 107 ~~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd---~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD 183 (395)
.+.|+++++++ .+.+.+.... +.++.+.+++|||++ .....|+++++||+ ..+.+..... +++|
T Consensus 87 ~~~Iy~i~~dg-~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs---~~~~lt~~~~-----~~~~ 153 (302)
T 3s25_A 87 RNSLCRIKRNG-HGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE---EKKKIKNHYL-----FTCN 153 (302)
T ss_dssp SEEEEEEETTS-CCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSC---CCEEEESSCC-----CCSE
T ss_pred CCeEEEEeCCC-CcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCC---CeEEEeCCCc-----eEee
Confidence 46899999999 4556665543 346677899999999 56779999999997 4566655433 5679
Q ss_pred cCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCC
Q psy13629 184 WLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTI 263 (395)
Q Consensus 184 ~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~ 263 (395)
|.+++|||++....+|++++++|..++.+.. .+..++++|..++|||++|+...+|+++++|| +++++|+++.+
T Consensus 154 ~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~----~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG--~~~~~Lt~~~~ 227 (302)
T 3s25_A 154 TSDRYFYYNNPKNGQLYRYDTASQSEALFYD----CNCYKPVVLDDTNVYYMDVNRDNAIVHVNINN--PNPVVLTEANI 227 (302)
T ss_dssp EETTEEEEECTTTCCEEEEETTTTEEEEEEC----SCEEEEEEEETTEEEEEEGGGTTEEEEECSSS--CCCEECSCSCE
T ss_pred EECCEEEEEeCCCceEEEEECCCCCEEEEeC----CCccceeeecCCEEEEEEcCCCcEEEEEECCC--CCeEEEeCCCc
Confidence 9999999999888999999999999887763 24456688999999999998678999999999 78888877654
Q ss_pred cCceeEEEeccccEEEEe-ccceeeeeeeccccceeeeeeecee-eeeeeeccCCccccceeeeeccceecceeEEEEec
Q psy13629 264 FWPNGIAIDFNNRLLYWI-DGRLTFIEVMDYDGYVRLVTSLGHI-NLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIR 341 (395)
Q Consensus 264 ~~P~glalD~~~~rLYwa-D~~~~~I~~~~~dG~~~~~t~~g~~-~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~ 341 (395)
| .+|+.+++|||+ |...+.|+++++||+.++....+.. .+.+| .+..||+.+.
T Consensus 228 --~---~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~~~~~i~i~--------------------~d~Iy~td~~ 282 (302)
T 3s25_A 228 --E---HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKGEFCNINVT--------------------SQYVYFTDFV 282 (302)
T ss_dssp --E---EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEESCEEEEEEC--------------------SSEEEEEETT
T ss_pred --c---eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCCccceEEEe--------------------CCEEEEEECC
Confidence 3 277779999997 6667999999999998876333333 55555 7788999888
Q ss_pred CcEEEecCC
Q psy13629 342 NFMIQGGDP 350 (395)
Q Consensus 342 ~~~iq~g~~ 350 (395)
...|..-..
T Consensus 283 ~~~i~~~~~ 291 (302)
T 3s25_A 283 SNKEYCTST 291 (302)
T ss_dssp TCCEEEEES
T ss_pred CCeEEEEEC
Confidence 766665443
No 49
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.86 E-value=1.5e-22 Score=179.32 Aligned_cols=94 Identities=48% Similarity=0.830 Sum_probs=88.1
Q ss_pred eeeceeeeeeeeccCCccccceeeeecc--c-eecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCEN--G-YYNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~~--g-~y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
+..|++.++||.+.+|.|++||++||+. | +|+|+.|||++++|+|||||++ ++|.|+.+++|+.|++| ...++|+
T Consensus 24 ~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~de-~~~~~h~ 102 (185)
T 4fru_A 24 EDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHY 102 (185)
T ss_dssp EEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC-CCCSCCC
T ss_pred EecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccccCCccCcc-ccccCcC
Confidence 5688999999999999999999999975 6 7999999999999999999986 78999999999999999 5688999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
++|+|||||.+||+|||||
T Consensus 103 ~~G~lsma~~gp~t~~SQF 121 (185)
T 4fru_A 103 GPGWVSMANAGKDTNGSQF 121 (185)
T ss_dssp STTEEEECCSSTTCBCSCE
T ss_pred CCeEEEEeeCCCCCcceEE
Confidence 9999999999999999998
No 50
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.85 E-value=1.1e-22 Score=176.81 Aligned_cols=94 Identities=36% Similarity=0.657 Sum_probs=84.5
Q ss_pred eeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCCCC
Q psy13629 299 LVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTGR 378 (395)
Q Consensus 299 ~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~~~ 378 (395)
.+|..|.+.++||.+.+|.|++||++||+.|||+|+.|||++++|+|||||++. +. +.++++..|++|+.+.++|. +
T Consensus 4 l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~-~~-g~~~~g~~~~dE~~~~l~~~-~ 80 (164)
T 1lop_A 4 FHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEP-GM-KQKATKEPIKNEANNGLKNT-R 80 (164)
T ss_dssp EEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEET-TT-EECCCCCCBCCCCCSSCCCC-T
T ss_pred EEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCccc-CC-CcCCCCCccccccccccccC-c
Confidence 457899999999999999999999999999999999999999999999999862 22 45678899999987788885 9
Q ss_pred eEEEeecC-CCCCCCCCC
Q psy13629 379 GVLSMANS-GPNTNTSQL 395 (395)
Q Consensus 379 G~l~ma~~-~~~~~~sqf 395 (395)
|+|||||. +||+|||||
T Consensus 81 G~lsmA~~~~p~s~gSQF 98 (164)
T 1lop_A 81 GTLAMARTQAPHSATAQF 98 (164)
T ss_dssp TEEEECCCSSTTCBCSCE
T ss_pred cEEEEeecCCCCCccceE
Confidence 99999975 799999998
No 51
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=99.85 E-value=3.6e-22 Score=177.60 Aligned_cols=94 Identities=51% Similarity=0.862 Sum_probs=88.5
Q ss_pred eeeceeeeeeeeccCCccccceeeeec--cce-ecceeEEEEecCcEEEecC-CCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCE--NGY-YNGTKFHRSIRNFMIQGGD-PTGTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~--~g~-y~~~~~~r~~~~~~iq~g~-~~~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
+..|++.++||.+.+|.|++||++||+ .+| |+|+.|||++++|+||||| +.+.|.|+.+++|+.|++| .+.++|+
T Consensus 39 t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE-~~~l~h~ 117 (193)
T 3k2c_A 39 ESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDE-NFELKHT 117 (193)
T ss_dssp EEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCBCCC-CCCSCCC
T ss_pred EEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCCCccccc-ccccccC
Confidence 578899999999999999999999999 777 9999999999999999999 5578999999999999999 6788999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
++|+|||||.+||+|||||
T Consensus 118 ~~G~lsmAn~gp~t~gSQF 136 (193)
T 3k2c_A 118 KEGILSMANCGAHTNGSQF 136 (193)
T ss_dssp STTEEEECCSSTTCBCSCE
T ss_pred CCcEEEEEeCCCCCCccEE
Confidence 9999999999999999998
No 52
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.85 E-value=3.2e-22 Score=174.29 Aligned_cols=94 Identities=38% Similarity=0.573 Sum_probs=82.4
Q ss_pred eeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCCCC
Q psy13629 299 LVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTGR 378 (395)
Q Consensus 299 ~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~~~ 378 (395)
.+|..|.+.++||.+.+|.|++||++||+.+||+|+.|||++++|+|||||+++.+.+ ..++.+|++|..+.++|. +
T Consensus 9 ~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~--~~~g~~~~dE~~~~l~~~-~ 85 (166)
T 1v9t_A 9 LTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQ--KKPNPPIKNEADNGLRNT-R 85 (166)
T ss_dssp EEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCCB--CCCCCCBCCCGGGSCCCC-T
T ss_pred EEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCCC--CCCCCcccccccccccCC-c
Confidence 3478999999999999999999999999999999999999999999999998754332 335788999976677665 9
Q ss_pred eEEEeecC-CCCCCCCCC
Q psy13629 379 GVLSMANS-GPNTNTSQL 395 (395)
Q Consensus 379 G~l~ma~~-~~~~~~sqf 395 (395)
|+|||||+ +||+|||||
T Consensus 86 G~lsmA~~~~p~t~gSQF 103 (166)
T 1v9t_A 86 GTIAMARTADKDSATSQF 103 (166)
T ss_dssp TEEEECCCSSTTCBCSCE
T ss_pred eEEEEeecCCCCCccceE
Confidence 99999997 599999998
No 53
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=99.84 E-value=4.2e-22 Score=175.97 Aligned_cols=94 Identities=52% Similarity=0.870 Sum_probs=86.9
Q ss_pred eeeceeeeeeeeccCCccccceeeeeccc--e-ecceeEEEEecCcEEEecCC-CCCCCCCcccCCCCCCCCCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCENG--Y-YNGTKFHRSIRNFMIQGGDP-TGTGTGGESIWGKPFEDEFKPNYTHT 376 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g--~-y~~~~~~r~~~~~~iq~g~~-~~~g~~~~~~~~~~~~~e~~~~~~~~ 376 (395)
+..|++.++||.+.+|.|++||++||+.+ | |+|+.|||++++|+|||||+ .++|.|+.++++..+++| .+.++|.
T Consensus 34 ~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~de-~~~l~h~ 112 (184)
T 3rdd_A 34 EPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHT 112 (184)
T ss_dssp EEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC-CCCSCCC
T ss_pred EeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccCCCcccCc-ccccccC
Confidence 46888999999999999999999999754 4 99999999999999999995 578999999999999999 4688999
Q ss_pred CCeEEEeecCCCCCCCCCC
Q psy13629 377 GRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 377 ~~G~l~ma~~~~~~~~sqf 395 (395)
++|+|||||.+||+|||||
T Consensus 113 ~~G~lsmA~~gp~s~gSQF 131 (184)
T 3rdd_A 113 GPGILSMANAGPNTNGSQF 131 (184)
T ss_dssp STTEEEECCSSTTCBSSCE
T ss_pred CCcEEEEEeCCCCCcccEE
Confidence 9999999999999999998
No 54
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.84 E-value=1.1e-21 Score=192.92 Aligned_cols=94 Identities=54% Similarity=0.936 Sum_probs=88.6
Q ss_pred eeeceeeeeeeeccCCccccceeeeecc--------c---eecceeEEEEecCcEEEecCCC-CCCCCCcccCCCCCCCC
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCEN--------G---YYNGTKFHRSIRNFMIQGGDPT-GTGTGGESIWGKPFEDE 368 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~~--------g---~y~~~~~~r~~~~~~iq~g~~~-~~g~~~~~~~~~~~~~e 368 (395)
+..|++.++||.+.+|.|++||++||+. | ||+|+.|||++++|+|||||++ ++|+|+++++|..|++|
T Consensus 27 ~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g~~~~~~~~~~~e 106 (370)
T 1ihg_A 27 ERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDE 106 (370)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCC
T ss_pred EecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCCCCCCCCCCcCCC
Confidence 3578899999999999999999999997 6 7999999999999999999998 89999999999999999
Q ss_pred CCCCCCCCCCeEEEeecCCCCCCCCCC
Q psy13629 369 FKPNYTHTGRGVLSMANSGPNTNTSQL 395 (395)
Q Consensus 369 ~~~~~~~~~~G~l~ma~~~~~~~~sqf 395 (395)
.+.++|+.+|+|||||.+||||||||
T Consensus 107 -~~~~~~~~~g~l~ma~~~~~~~~sqf 132 (370)
T 1ihg_A 107 -NFHYKHDKEGLLSMANAGSNTNGSQF 132 (370)
T ss_dssp -CCCBCCCSTTEEEECCSSTTCBCSCE
T ss_pred -cCCcCCCCCeEEEEeeCCCCCCCceE
Confidence 45789999999999999999999998
No 55
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=99.84 E-value=4e-22 Score=174.08 Aligned_cols=95 Identities=36% Similarity=0.503 Sum_probs=83.6
Q ss_pred eeeeeeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCCCcccCCCCCCCCCCCCCCCCC
Q psy13629 298 RLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTG 377 (395)
Q Consensus 298 ~~~t~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~~~~~~~~~~~~e~~~~~~~~~ 377 (395)
..+|+.|.+.++||.+.+|.|++||++||+.+||+++.|||++++|+|||||++..+ +...++..+++|..+.++| .
T Consensus 7 ~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~--~~~~~~~~~~~E~~~~l~~-~ 83 (167)
T 3s6m_A 7 ELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGL--KQKPTDAPIANEANNGLKN-D 83 (167)
T ss_dssp EEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTT--EECCCCCCBCCCGGGCCCC-C
T ss_pred EEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCC--CCCCCCCccCCcccccccC-C
Confidence 345889999999999999999999999999999999999999999999999986432 2345578899997777877 5
Q ss_pred CeEEEeec-CCCCCCCCCC
Q psy13629 378 RGVLSMAN-SGPNTNTSQL 395 (395)
Q Consensus 378 ~G~l~ma~-~~~~~~~sqf 395 (395)
+|+||||| .+||+|||||
T Consensus 84 ~G~lsmA~~~~p~t~gSQF 102 (167)
T 3s6m_A 84 TYTIAMARTNDPHSATAQF 102 (167)
T ss_dssp TTEEEECCCSSTTCBCSCE
T ss_pred ccEEEEecCCCCCCccceE
Confidence 99999999 5799999998
No 56
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.82 E-value=2.6e-21 Score=176.79 Aligned_cols=92 Identities=28% Similarity=0.573 Sum_probs=80.5
Q ss_pred eeeceeeeeeeeccCCccccceeeeecc-----------------c--e-ecceeEEEEecCcEEEecC-CCCCCCCCcc
Q psy13629 301 TSLGHINLELYCNVFPKTCENFMKHCEN-----------------G--Y-YNGTKFHRSIRNFMIQGGD-PTGTGTGGES 359 (395)
Q Consensus 301 t~~g~~~i~Lf~d~ap~t~~nf~~l~~~-----------------g--~-y~~~~~~r~~~~~~iq~g~-~~~~g~~~~~ 359 (395)
+..|++.++||.+.+|.|++||++||+. | | |+|+.|||++++|+||||| +.++|+|+++
T Consensus 26 t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~~~g~G~Gg~s 105 (234)
T 2ose_A 26 EIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIYNSNGSSAGT 105 (234)
T ss_dssp EEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCCC----CCCCC
T ss_pred cccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCccCCCCCCCcc
Confidence 5788999999999999999999999983 4 7 9999999999999999999 5788999999
Q ss_pred cCCCC-----CCCCCCCCCCCCCCeEEEeec----CCCCCCCCCC
Q psy13629 360 IWGKP-----FEDEFKPNYTHTGRGVLSMAN----SGPNTNTSQL 395 (395)
Q Consensus 360 ~~~~~-----~~~e~~~~~~~~~~G~l~ma~----~~~~~~~sqf 395 (395)
++|.. |+ | +.++|.++|+||||| .+||+|||||
T Consensus 106 iyg~~~~p~~f~-~--~~l~h~~~G~lsMAn~~~~~gpntngSQF 147 (234)
T 2ose_A 106 VYCDEPIPPVFG-D--YFYPHESKGLLSLVPYTDESGNRYYDSTF 147 (234)
T ss_dssp TTTTCCBCCCCC-S--CCCCSCSTTEEEECCEECTTSCEEBCSCE
T ss_pred ccCCccCccccc-C--cCccCCCCCEEEEecccccCCCCCccceE
Confidence 99987 66 4 478998999999999 8999999998
No 57
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.79 E-value=8.8e-21 Score=182.72 Aligned_cols=93 Identities=26% Similarity=0.434 Sum_probs=83.0
Q ss_pred eeceeeeeeeeccCCccccceeeeeccceecceeEEEEecCcEEEecCCCCCCCC---------------------Cccc
Q psy13629 302 SLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTG---------------------GESI 360 (395)
Q Consensus 302 ~~g~~~i~Lf~d~ap~t~~nf~~l~~~g~y~~~~~~r~~~~~~iq~g~~~~~g~~---------------------~~~~ 360 (395)
..|.+.++||.+.+|.|++||++||+.+||+|+.|||+ ++|+|||||++++|.| +.++
T Consensus 186 ~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~~~~~g~~~~iP~E~~~~G~g~pi 264 (369)
T 3rfy_A 186 EDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEIMVTGEKTPF 264 (369)
T ss_dssp SEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCCSCCCCCCCSSSSSSCSSSSCCSC
T ss_pred cceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCccCcccCcCcccCccccccCCCCCc
Confidence 47899999999999999999999999999999999999 9999999999887766 3566
Q ss_pred CCCCCCCCC----CCCCCCCCCeEEEeecC--CCCCCCCCC
Q psy13629 361 WGKPFEDEF----KPNYTHTGRGVLSMANS--GPNTNTSQL 395 (395)
Q Consensus 361 ~~~~~~~e~----~~~~~~~~~G~l~ma~~--~~~~~~sqf 395 (395)
++..|++|. .+.++|+.+|+|||||+ +||+|||||
T Consensus 265 yg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQF 305 (369)
T 3rfy_A 265 YGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQV 305 (369)
T ss_dssp CCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCC
T ss_pred CCCccccccccccccccccCCCceEEEeecCCCCCCccceE
Confidence 777777763 35788889999999998 799999999
No 58
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=8.4e-16 Score=153.97 Aligned_cols=188 Identities=12% Similarity=0.111 Sum_probs=145.0
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCC----eEEEEEccCCCCCceEEEEeCCCCCcceEEEe
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTE----MISCCTFDGNNVGSKHNVITNGLITPDGLAID 183 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~----~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD 183 (395)
+.|+++++++ .....+......|.+|++|+.++.|||+|...+ .+..+..+|.-. ....+. .+..|.++|+|
T Consensus 159 ~~I~~id~~~-~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~-~~~~l~--~~~~p~giavd 234 (430)
T 3tc9_A 159 HPTRLIDFEK-EYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK-VITELT--KGQNCNGAETH 234 (430)
T ss_dssp EEEEEEETTT-TEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC-SEEEEE--ECSSCCCEEEC
T ss_pred CcEEEEECCC-CEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee-eeeeec--cCCCceEEEEe
Confidence 5788899877 556666778889999999999999999997543 466677776521 112222 47889999999
Q ss_pred cCCCeEEEEeCCCCeEEEEECCCCceEEEEe-cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCC---cceEEEE
Q psy13629 184 WLTEKLYWTDSETNKLEVSSLDGKKRKVLYW-EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDP---RHRKVIV 259 (395)
Q Consensus 184 ~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~-~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~---~~~~~lv 259 (395)
+.+++|||+|...++|.++++++.....+.. .....|++|+++|..++|||+|+. ..+|.+++.+|.. ....++.
T Consensus 235 p~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~-~~~I~~~~~d~~~~~~~~~~~~a 313 (430)
T 3tc9_A 235 PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN-QHYILRSDYDWKTKRLTTPYIVC 313 (430)
T ss_dssp TTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT-TTEEEEEEEETTTTEECCCEEEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC-CCEEEEEeCCcccccccceEEEe
Confidence 9899999999999999999999877644443 345689999999998889999955 7899999999721 0123344
Q ss_pred ec--------------CCcCce-eEEEec-------cccEEEEeccceeeeeeeccccceeee
Q psy13629 260 DS--------------TIFWPN-GIAIDF-------NNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 260 ~~--------------~~~~P~-glalD~-------~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
.. .+..|. |++++. .+++|||+|...++|.+++.+|.....
T Consensus 314 g~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~v~~~ 376 (430)
T 3tc9_A 314 GQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTF 376 (430)
T ss_dssp ECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSEEEEE
T ss_pred ccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCCcEEEE
Confidence 32 256799 899962 457999999999999999998855444
No 59
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.72 E-value=7.7e-16 Score=154.39 Aligned_cols=186 Identities=12% Similarity=0.086 Sum_probs=139.9
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCC----CeEEEEEccCCCCCceEEEEeCCCCCcceEEEe
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT----EMISCCTFDGNNVGSKHNVITNGLITPDGLAID 183 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~----~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD 183 (395)
+.|+++++.. .....+......|.+|++|+.++ ||++|... ..+.++..++.. ..... ...+..|.|+|+|
T Consensus 162 ~~I~~id~~~-g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~--~~~~~-~~~~~~P~giavd 236 (433)
T 4hw6_A 162 DAFRHVDFVN-QYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF--TERLS-LCNARGAKTCAVH 236 (433)
T ss_dssp SCEEEEETTT-TEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT--CCEEE-EEECSSBCCCEEC
T ss_pred CCEEEEECCC-CEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe--ecccc-ccccCCCCEEEEe
Confidence 3678888865 56666777888999999999988 99999743 235555555432 11122 2257899999999
Q ss_pred cCCCeEEEEeCCCCeEEEEECC-CCceEEEEe-cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCC---CcceEEE
Q psy13629 184 WLTEKLYWTDSETNKLEVSSLD-GKKRKVLYW-EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGD---PRHRKVI 258 (395)
Q Consensus 184 ~~~~~LYwtd~~~~~I~v~~ld-g~~~~~l~~-~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~---~~~~~~l 258 (395)
+..++|||+|..+++|.+++++ |.....+.. .....+.+|+++|..++|||+|++ ..+|.++++++. .....++
T Consensus 237 ~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~-~~~I~~~~~d~~~~~~~~~~~~ 315 (433)
T 4hw6_A 237 PQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG-KHCIYRVDYNRETGKLAVPYIV 315 (433)
T ss_dssp TTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT-TTEEEEEEBCTTTCCBCCCEEE
T ss_pred CCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC-CCEEEEEeCCCCCcccCcEEEE
Confidence 9899999999999999999998 554244442 334567789999998899999955 789999998852 1122344
Q ss_pred Eec--------------CCcCceeEEE---------eccccEEEEeccceeeeeeeccccceeee
Q psy13629 259 VDS--------------TIFWPNGIAI---------DFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 259 v~~--------------~~~~P~glal---------D~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
... .+.+|.||++ | .+++|||+|...++|.+++.+|.....
T Consensus 316 ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~~G~v~t~ 379 (433)
T 4hw6_A 316 CGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTPEGRVTTY 379 (433)
T ss_dssp EECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECTTSEEEEE
T ss_pred EecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECCCCCEEEE
Confidence 443 3568999999 6 778999999999999999998855444
No 60
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.71 E-value=2.4e-16 Score=150.61 Aligned_cols=169 Identities=10% Similarity=0.061 Sum_probs=131.8
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
..|.++++++. ..+.+..... +++++.++.|||++.....|++++++|+ .++.+.. .+...+++|.++
T Consensus 129 ~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~---~~~~l~~----~~~~~~~~P~g~ 196 (302)
T 3s25_A 129 TSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ---SEALFYD----CNCYKPVVLDDT 196 (302)
T ss_dssp EEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT---EEEEEEC----SCEEEEEEEETT
T ss_pred ceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC---CEEEEeC----CCccceeeecCC
Confidence 36889999984 4444444322 4568889999999987889999999997 4454533 233456777899
Q ss_pred eEEEEeCCC-CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 188 KLYWTDSET-NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 188 ~LYwtd~~~-~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
.|||++... .+|++++++|+.+++|....+ | .++|..++|||++.+....|+++++|| +.++.+....
T Consensus 197 ~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~---~~~~~g~~Iy~~~~~~~~~i~~~~~DG--~~r~~l~~~~---- 265 (302)
T 3s25_A 197 NVYYMDVNRDNAIVHVNINNPNPVVLTEANI--E---HYNVYGSLIFYQRGGDNPALCVVKNDG--TGFKELAKGE---- 265 (302)
T ss_dssp EEEEEEGGGTTEEEEECSSSCCCEECSCSCE--E---EEEEETTEEEEEECSSSCEEEEEETTS--CCCEEEEESC----
T ss_pred EEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--c---eEEECCCEEEEEECCCCcEEEEEECCC--CccEEeeCCc----
Confidence 999999653 699999999999888864433 3 388889999998656568999999999 7887777653
Q ss_pred eeEEEeccccEEEEeccceeeeeeeccccceeee
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
..+++..+++|||+|+..+.|.++.+||+.+++
T Consensus 266 -~~~i~i~~d~Iy~td~~~~~i~~~~~dGs~~~~ 298 (302)
T 3s25_A 266 -FCNINVTSQYVYFTDFVSNKEYCTSTQNPDTIK 298 (302)
T ss_dssp -EEEEEECSSEEEEEETTTCCEEEEESSSCCSCE
T ss_pred -cceEEEeCCEEEEEECCCCeEEEEECCCCCceE
Confidence 235666799999999999999999999998765
No 61
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=7e-16 Score=154.53 Aligned_cols=160 Identities=10% Similarity=0.145 Sum_probs=130.7
Q ss_pred CCCCeEEEEEEc-CCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCC----eEEE
Q psy13629 127 DLEEGAAIDYYY-KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETN----KLEV 201 (395)
Q Consensus 127 ~~~~~~gl~~d~-~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~----~I~v 201 (395)
.+..|.+|++|+ .++.||++|.. ++|+++++++. . ...+......|.+|++|+.++.|||+|...+ .+.+
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~---~-v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKE---Y-VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTT---E-EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCC---E-EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 477899999998 58899999977 89999999985 2 3334457788999999998888999997433 5777
Q ss_pred EECCCCce--EEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe-cCCcCceeEEEeccccEE
Q psy13629 202 SSLDGKKR--KVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD-STIFWPNGIAIDFNNRLL 278 (395)
Q Consensus 202 ~~ldg~~~--~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~-~~~~~P~glalD~~~~rL 278 (395)
.+.+|... ..+ ..+..|+++++||.+|+|||+|++ ..+|.++++++ .....+.. ....+|++|++|+.+++|
T Consensus 210 ~~~~g~~~~~~~l--~~~~~p~giavdp~~g~lyv~d~~-~~~V~~~~~~~--~~~~~~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 210 LTRESGFKVITEL--TKGQNCNGAETHPINGELYFNSWN-AGQVFRYDFTT--QETTPLFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp EEGGGTSCSEEEE--EECSSCCCEEECTTTCCEEEEETT-TTEEEEEETTT--TEEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred EeCCCceeeeeee--ccCCCceEEEEeCCCCEEEEEECC-CCEEEEEECCC--CcEEEEEEcCCCCcceeEEEcCCCCEE
Confidence 88888665 333 358899999999999999999977 67999999998 44423333 344689999999888889
Q ss_pred EEeccceeeeeeeccccc
Q psy13629 279 YWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 279 YwaD~~~~~I~~~~~dG~ 296 (395)
||+|...++|.+++++|.
T Consensus 285 yv~d~~~~~I~~~~~d~~ 302 (430)
T 3tc9_A 285 YIVVVNQHYILRSDYDWK 302 (430)
T ss_dssp EEEETTTTEEEEEEEETT
T ss_pred EEEECCCCEEEEEeCCcc
Confidence 999999999999999975
No 62
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=1.9e-14 Score=143.07 Aligned_cols=180 Identities=18% Similarity=0.195 Sum_probs=138.4
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCC-eEEEEEccCCCCCceEEEE----eCCCCCcceEEE
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTE-MISCCTFDGNNVGSKHNVI----TNGLITPDGLAI 182 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~-~I~~~~~dg~~~~~~~~i~----~~~~~~p~glAV 182 (395)
+.|+++++++ .....+......+. +++++.++.|||++...+ .|++++.++.. ....+ ......|.++|+
T Consensus 152 ~~I~~id~~~-g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~---~~~~~g~~~~~~~~~p~~iav 226 (409)
T 3hrp_A 152 PRVRLISVDD-NKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW---APTRIGQLGSTFSGKIGAVAL 226 (409)
T ss_dssp TEEEEEETTT-TEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT---CEEEEEECCTTSCSCCCBCEE
T ss_pred CcEEEEECCC-CEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc---eeEEeeeccchhcCCcEEEEE
Confidence 3788899876 45555555566677 999999999999997655 99999998752 22222 225678999999
Q ss_pred ecCCCeEEEEeCCCCeEEEEECCCCceEEEE----ec-CCCCce-eEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceE
Q psy13629 183 DWLTEKLYWTDSETNKLEVSSLDGKKRKVLY----WE-DIDQPR-AIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRK 256 (395)
Q Consensus 183 D~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~----~~-~~~~P~-~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~ 256 (395)
|+.++.||+++. .++|.++++++.....+. .. ....|. +|+++|..+.|||+|.. ..+|.+++.+| . ..
T Consensus 227 ~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-~~~I~~~~~~g--~-~~ 301 (409)
T 3hrp_A 227 DETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-LSSVYKITPDG--E-CE 301 (409)
T ss_dssp CTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-TTEEEEECTTC--C-EE
T ss_pred eCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-CCEEEEEecCC--C-EE
Confidence 998999999886 789999999987655441 11 123467 99999999999999954 78999999998 3 44
Q ss_pred EEEecC--------------CcCceeEEEeccccEEEEecc-ceeeeeeec-ccccee
Q psy13629 257 VIVDST--------------IFWPNGIAIDFNNRLLYWIDG-RLTFIEVMD-YDGYVR 298 (395)
Q Consensus 257 ~lv~~~--------------~~~P~glalD~~~~rLYwaD~-~~~~I~~~~-~dG~~~ 298 (395)
+++... +.+|+||++|.. ++||++|. ..++|.+++ .+|...
T Consensus 302 ~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 302 WFCGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp EEEECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTTTCEEEEEETTTTEEE
T ss_pred EEEeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCCCCEEEEEECCCCEEE
Confidence 555443 678999999965 56999999 999999999 666543
No 63
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.65 E-value=2.2e-14 Score=142.60 Aligned_cols=174 Identities=12% Similarity=0.117 Sum_probs=129.7
Q ss_pred EEEEeeCCCCCccEEe----cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE----eCC--CCCcc
Q psy13629 109 DIRIANLSRPLKPVTI----IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI----TNG--LITPD 178 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~----~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~----~~~--~~~p~ 178 (395)
.|.+++..+......+ ......+.++++++.++.||+++. +++|++++.++. . ..++ ..+ ...|.
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~---~-~~~~~~~~~~g~~~~~P~ 269 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQ---E-VTLIKQLELSGSLGTNPG 269 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTC---C-EEEEEECCCCSCCCCSSC
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCC---C-EEEEecccccCCCCCCcc
Confidence 5666665542222222 225678999999998999999885 789999999875 2 2232 111 12356
Q ss_pred -eEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecC--------------CCCceeEEEeCCCCeEEEEeeCCCCeE
Q psy13629 179 -GLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWED--------------IDQPRAIALVPQDSIMFWTDWGEVPKI 243 (395)
Q Consensus 179 -glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~--------------~~~P~~iavdp~~g~LYwtd~~~~~~I 243 (395)
+|++|+.+++||++|..+++|.+++++|.. ..+.... +..|++|++|+. |.||++|+....+|
T Consensus 270 ~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~~~~I 347 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFKGYCL 347 (409)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTTTCEE
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCCCCEE
Confidence 999999889999999999999999999983 3443332 678999999986 56999996148899
Q ss_pred EEEe-cCCCCcceEEEEec--------------CCcCceeEEEeccccEEEEeccceeeeeeecc
Q psy13629 244 ERGA-MNGDPRHRKVIVDS--------------TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 244 ~~~~-~dG~~~~~~~lv~~--------------~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~ 293 (395)
.+++ .+| ...++... .+.+|+||++|.. ++||++|+..++|.++.+
T Consensus 348 ~~~~~~~G---~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 348 RKLDILDG---YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEETTTT---EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred EEEECCCC---EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 9999 555 34444443 2578999999966 899999999999988765
No 64
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=1.1e-14 Score=139.94 Aligned_cols=181 Identities=13% Similarity=0.064 Sum_probs=133.5
Q ss_pred EEEEeeCCCCCccEEe--cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE--------eCCCCCcc
Q psy13629 109 DIRIANLSRPLKPVTI--IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI--------TNGLITPD 178 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~--~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~--------~~~~~~p~ 178 (395)
.|.+++.+. .+.... ...+..|.++++|+.++ ||++|..+++|.+++.+|... ....+- ...+..|.
T Consensus 70 ~i~~~d~~~-g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 70 TILVIDPNN-AEILQSSGKNLFYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp CEEEECTTT-CCEEEEECTTTCSSEEEEEECTTSC-EEEEETTTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEE
T ss_pred cEEEEECCC-CeEEeccCCCccCCceEEEECCCCC-EEEEECCCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCc
Confidence 577777754 222222 23467899999998666 999999999999999988520 112221 23456899
Q ss_pred eEEEecCCCeEEEEeC-CCCeEEEEECCCCceEEEEec---------CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEec
Q psy13629 179 GLAIDWLTEKLYWTDS-ETNKLEVSSLDGKKRKVLYWE---------DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAM 248 (395)
Q Consensus 179 glAVD~~~~~LYwtd~-~~~~I~v~~ldg~~~~~l~~~---------~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~ 248 (395)
+||+|+.+++||++|. .+++|.+++.+|.....+... .+..|++|++||.++.||++|++ ..+|.+.+.
T Consensus 147 ~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-~~~I~~~~~ 225 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-NGRIQCFKT 225 (329)
T ss_dssp EEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-TTEEEEEET
T ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-CCEEEEEEC
Confidence 9999988999999996 799999999999877665422 24569999999988999999965 678888888
Q ss_pred C-CCCcceEEE--------------------------------------E--------------ecCCcCceeEEEeccc
Q psy13629 249 N-GDPRHRKVI--------------------------------------V--------------DSTIFWPNGIAIDFNN 275 (395)
Q Consensus 249 d-G~~~~~~~l--------------------------------------v--------------~~~~~~P~glalD~~~ 275 (395)
+ |. -...+ + ...+..|.+|++|.++
T Consensus 226 ~~G~--~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG 303 (329)
T 3fvz_A 226 DTKE--FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG 303 (329)
T ss_dssp TTCC--EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS
T ss_pred CCCc--EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC
Confidence 7 42 11111 0 1235568899998655
Q ss_pred cEEEEeccceeeeeeeccccc
Q psy13629 276 RLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 276 ~rLYwaD~~~~~I~~~~~dG~ 296 (395)
+||++|...++|.+++++|.
T Consensus 304 -~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 304 -TVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp -EEEEEESSSCCEEEEEEEEC
T ss_pred -CEEEEECCCCEEEEEeCCcc
Confidence 89999988888888888764
No 65
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=8.6e-15 Score=140.55 Aligned_cols=168 Identities=16% Similarity=0.094 Sum_probs=128.7
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCC------------------------CeEEEEEccCCCCCceEEEEeCCCCCcceEEE
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGT------------------------EMISCCTFDGNNVGSKHNVITNGLITPDGLAI 182 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~------------------------~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAV 182 (395)
.+..+.|+++|+. ++||+++..+ ++|.+++.+... .....-...+..|.|||+
T Consensus 22 ~l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 22 LPGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE--ILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CCSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC--EEEEECTTTCSSEEEEEE
T ss_pred ecCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe--EEeccCCCccCCceEEEE
Confidence 4688999999987 4689999776 368888886331 112222245678999999
Q ss_pred ecCCCeEEEEeCCCCeEEEEECCCCc--eEEEE--------ecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCC
Q psy13629 183 DWLTEKLYWTDSETNKLEVSSLDGKK--RKVLY--------WEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDP 252 (395)
Q Consensus 183 D~~~~~LYwtd~~~~~I~v~~ldg~~--~~~l~--------~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~ 252 (395)
|+ .++||++|...++|.+++++|.. ...+- ...+..|++|++||.++.||++|.....+|.+.+.+|
T Consensus 99 d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-- 175 (329)
T 3fvz_A 99 DT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-- 175 (329)
T ss_dssp CT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS--
T ss_pred CC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC--
Confidence 97 66699999999999999999983 33332 2346689999999989999999942478999999998
Q ss_pred cceEEEEe---------cCCcCceeEEEeccccEEEEeccceeeeeeeccc-cceeee
Q psy13629 253 RHRKVIVD---------STIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD-GYVRLV 300 (395)
Q Consensus 253 ~~~~~lv~---------~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d-G~~~~~ 300 (395)
.....+.. ..+..|+||++|..+++||++|...++|.+.+.+ |.....
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 44444432 2345799999998779999999999999999998 654443
No 66
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.62 E-value=1.9e-14 Score=144.34 Aligned_cols=162 Identities=9% Similarity=0.045 Sum_probs=125.3
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CCCCCcceEEEecCCCeEEEEeCCCCeEEEEECC
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 205 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ld 205 (395)
.+..|.++++|+.++.|||+|..+++|++++.++.. ....+.. .....+.+||+|+.++.||++|..+++|.+++++
T Consensus 226 ~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~--~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 226 NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGT--LTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCC--EEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCe--EEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 577899999999888999999999999999998431 1123332 2334566899999888899999999999999988
Q ss_pred CCc-----eEEEEec--------------CCCCceeEEE--------eCCCCeEEEEeeCCCCeEEEEecCCCCcceEEE
Q psy13629 206 GKK-----RKVLYWE--------------DIDQPRAIAL--------VPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVI 258 (395)
Q Consensus 206 g~~-----~~~l~~~--------------~~~~P~~iav--------dp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~l 258 (395)
+.. ..++... .+..|.+|++ |...|.|||+|++ +.+|.+++.+| . ..++
T Consensus 304 ~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~-n~~I~~~~~~G--~-v~t~ 379 (433)
T 4hw6_A 304 RETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD-SHTVRVLTPEG--R-VTTY 379 (433)
T ss_dssp TTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT-TTEEEEECTTS--E-EEEE
T ss_pred CCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC-CCEEEEECCCC--C-EEEE
Confidence 532 1233321 3678999999 2458899999976 88999999888 3 3334
Q ss_pred Eec-----------------CCcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 259 VDS-----------------TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 259 v~~-----------------~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
... .+.+|.||++|+.+++||++|..+++|.+++++
T Consensus 380 ~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 380 AGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 322 256899999998889999999999999988764
No 67
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=3.1e-14 Score=144.07 Aligned_cols=170 Identities=8% Similarity=0.000 Sum_probs=131.6
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEcc-------CCCC------C---ceEEE-EeCCCCCcceEEEecCCCeE
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD-------GNNV------G---SKHNV-ITNGLITPDGLAIDWLTEKL 189 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~d-------g~~~------~---~~~~i-~~~~~~~p~glAVD~~~~~L 189 (395)
...++.|+++|+.++.||++|...++|++++++ +... . ....+ .......|.+||+|+.++.|
T Consensus 245 ~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~l 324 (496)
T 3kya_A 245 AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYA 324 (496)
T ss_dssp EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEE
Confidence 567899999999999999999999999999998 3321 0 01222 23344678999999988789
Q ss_pred EEEeCCCCeEEEEECCCCce-----EEEEec--------------CCCCce-eEEEeC------CCCeEEEEeeCCCCeE
Q psy13629 190 YWTDSETNKLEVSSLDGKKR-----KVLYWE--------------DIDQPR-AIALVP------QDSIMFWTDWGEVPKI 243 (395)
Q Consensus 190 Ywtd~~~~~I~v~~ldg~~~-----~~l~~~--------------~~~~P~-~iavdp------~~g~LYwtd~~~~~~I 243 (395)
|++|..+++|.++++++... .++... .+..|. +++++. ..|.||++|++ +++|
T Consensus 325 YvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~-N~rI 403 (496)
T 3kya_A 325 YFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL-NFCV 403 (496)
T ss_dssp EEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG-GTEE
T ss_pred EEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC-CCEE
Confidence 99999999999999888642 333321 357899 888873 57899999977 8999
Q ss_pred EEEecCCCCcceEEEEec-----------------------CCcCceeEEEeccccEEEEeccceeeeeeeccccceeee
Q psy13629 244 ERGAMNGDPRHRKVIVDS-----------------------TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 244 ~~~~~dG~~~~~~~lv~~-----------------------~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
.+++.+| ...++... .+.+|.||++|..+++||++|..+++|.++++++..-..
T Consensus 404 r~i~~~G---~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 404 RKVTPEG---IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EEECTTC---BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred EEEeCCC---CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 9999888 34445432 256899999997679999999999999999998876554
No 68
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=2.4e-14 Score=131.97 Aligned_cols=180 Identities=17% Similarity=0.209 Sum_probs=135.7
Q ss_pred EEEEeeCCCCCccEEe-cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTI-IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~-~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
.|.+++.++ ...... ......+.++++|+.+ +||+++...+.|.+++..+. ............|.+|++|. .+
T Consensus 88 ~i~~~d~~~-~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~---~~~~~~~~~~~~p~~i~~~~-~g 161 (270)
T 1rwi_B 88 RVVTLAAGS-NNQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSK---TQTVLPFTGLNDPDGVAVDN-SG 161 (270)
T ss_dssp EEEEECTTC-SCCEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCC---SCEECCCCSCCSCCCEEECT-TC
T ss_pred EEEEEeCCC-ceEeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCc---eeEeeccccCCCceeEEEeC-CC
Confidence 577788776 333322 3455789999999865 59999988899999954432 12222234557899999998 56
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
+||+++...+.|.++++++..........+..|.+|++|+. |.||+++++ ..+|.+.+.+| ..........+..|.
T Consensus 162 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~-g~l~v~~~~-~~~v~~~~~~~--~~~~~~~~~~~~~p~ 237 (270)
T 1rwi_B 162 NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEA-GTVYVTEHN-TNQVVKLLAGS--TTSTVLPFTGLNTPL 237 (270)
T ss_dssp CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTT-CCEEEEETT-TSCEEEECTTC--SCCEECCCCSCSCEE
T ss_pred CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCC-CCEEEEECC-CCcEEEEcCCC--CcceeeccCCCCCce
Confidence 79999988899999999987765544345688999999985 599999965 67899999988 444333334457899
Q ss_pred eEEEeccccEEEEeccceeeeeeeccccceee
Q psy13629 268 GIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRL 299 (395)
Q Consensus 268 glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~ 299 (395)
++++|.. ++||+++...++|..++++...+.
T Consensus 238 ~i~~~~~-g~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 238 AVAVDSD-RTVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp EEEECTT-CCEEEEEGGGTEEEEECCCGGGSC
T ss_pred eEEECCC-CCEEEEECCCCEEEEEcCCCcccc
Confidence 9999965 579999999999999998876554
No 69
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=1.7e-13 Score=138.61 Aligned_cols=189 Identities=12% Similarity=0.087 Sum_probs=138.9
Q ss_pred EEEEEeeCCCCCccEEecCC----CCCeEEEEE-------EcCCCEEEEEECCCC------eEEEEEccCCCCCc----e
Q psy13629 108 LDIRIANLSRPLKPVTIIKD----LEEGAAIDY-------YYKKSMVCWTDHGTE------MISCCTFDGNNVGS----K 166 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~----~~~~~gl~~-------d~~~~~lywsd~~~~------~I~~~~~dg~~~~~----~ 166 (395)
+.|+++|++. ..+..+... +.+|.+|+| |..++.||++|...+ .|+.+..+...... .
T Consensus 162 ~~i~~ID~~~-~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~ 240 (496)
T 3kya_A 162 KAIQLIDLKN-RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDI 240 (496)
T ss_dssp EEEEEEETTT-TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCE
T ss_pred CeEEEEECCC-CEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccc
Confidence 4788899877 455444432 447999999 999999999998762 37777544311111 1
Q ss_pred EEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECC-------CCce------------EEEEe-cCCCCceeEEEe
Q psy13629 167 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-------GKKR------------KVLYW-EDIDQPRAIALV 226 (395)
Q Consensus 167 ~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ld-------g~~~------------~~l~~-~~~~~P~~iavd 226 (395)
..+. ....|.++++|+.++.||++|...++|.+++++ +... ..+.. .....|++|+++
T Consensus 241 ~~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~ 318 (496)
T 3kya_A 241 QLIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIH 318 (496)
T ss_dssp EEEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEEC
T ss_pred eeec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEc
Confidence 2222 467999999999999999999999999999997 3322 23332 345679999999
Q ss_pred CCCCeEEEEeeCCCCeEEEEecCCCCc---ceEEEEec--------------CCcCce-eEEEec------cccEEEEec
Q psy13629 227 PQDSIMFWTDWGEVPKIERGAMNGDPR---HRKVIVDS--------------TIFWPN-GIAIDF------NNRLLYWID 282 (395)
Q Consensus 227 p~~g~LYwtd~~~~~~I~~~~~dG~~~---~~~~lv~~--------------~~~~P~-glalD~------~~~rLYwaD 282 (395)
|..++||++|++ +++|.+++.||... ...+++.. .+..|. |+++|- .++.||++|
T Consensus 319 p~G~~lYvaD~~-~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD 397 (496)
T 3kya_A 319 PTGKYAYFGVIN-NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVD 397 (496)
T ss_dssp TTSSEEEEEETT-TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEE
T ss_pred CCCCEEEEEeCC-CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEE
Confidence 998889999955 88999999998311 12445543 356899 788873 568999999
Q ss_pred cceeeeeeeccccceeee
Q psy13629 283 GRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 283 ~~~~~I~~~~~dG~~~~~ 300 (395)
...++|.+++.+|.....
T Consensus 398 ~~N~rIr~i~~~G~v~Ti 415 (496)
T 3kya_A 398 RLNFCVRKVTPEGIVSTY 415 (496)
T ss_dssp GGGTEEEEECTTCBEEEE
T ss_pred CCCCEEEEEeCCCCEEEE
Confidence 999999999999854444
No 70
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=6.3e-14 Score=129.14 Aligned_cols=180 Identities=17% Similarity=0.200 Sum_probs=130.9
Q ss_pred EEEEeeCCCCCccEEe-cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTI-IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~-~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
.|.+++..+ ...... ......+.+|++|+.++ ||+++. .+.|.+++.++. ....+.......|.+|++|+ .+
T Consensus 47 ~i~~~~~~~-~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~---~~~~~~~~~~~~p~~i~~~~-~g 119 (270)
T 1rwi_B 47 RVVKLATGS-TGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSN---NQTVLPFDGLNYPEGLAVDT-QG 119 (270)
T ss_dssp EEEEECC------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCS---CCEECCCCSCSSEEEEEECT-TC
T ss_pred cEEEecCCC-cccceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCc---eEeeeecCCcCCCcceEECC-CC
Confidence 566776654 222222 33456899999998655 999997 889999998875 22333334557899999998 67
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
+||+++...+.|.+++..+.............|++|++|+ +|.||+++.+ ..+|.+.+.++ ..........+..|.
T Consensus 120 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~-~~~i~~~~~~~--~~~~~~~~~~~~~p~ 195 (270)
T 1rwi_B 120 AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTD-NNRVVKLEAES--NNQVVLPFTDITAPW 195 (270)
T ss_dssp CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEGG-GTEEEEECTTT--CCEEECCCSSCCSEE
T ss_pred CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEECC-CCEEEEEecCC--CceEeecccCCCCce
Confidence 7999998889999997655444333324467899999998 4569999955 67899999988 443333334457899
Q ss_pred eEEEeccccEEEEeccceeeeeeeccccceeee
Q psy13629 268 GIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 268 glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
+|++|.. ++||+++...++|.+++.+|.....
T Consensus 196 ~i~~d~~-g~l~v~~~~~~~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 196 GIAVDEA-GTVYVTEHNTNQVVKLLAGSTTSTV 227 (270)
T ss_dssp EEEECTT-CCEEEEETTTSCEEEECTTCSCCEE
T ss_pred EEEECCC-CCEEEEECCCCcEEEEcCCCCccee
Confidence 9999965 4999999989999999998865443
No 71
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=1.7e-12 Score=120.97 Aligned_cols=182 Identities=13% Similarity=0.137 Sum_probs=136.2
Q ss_pred EEEEeeCCCCCccEEec------CCCCCeEEEEEEcCCCEEEEEECC-CCeEEEEEccCCCCCceEEEEeCCCCCcceEE
Q psy13629 109 DIRIANLSRPLKPVTII------KDLEEGAAIDYYYKKSMVCWTDHG-TEMISCCTFDGNNVGSKHNVITNGLITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~------~~~~~~~gl~~d~~~~~lywsd~~-~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glA 181 (395)
.|.+++.++ .....+. .....+.+++++..++.||+++.. ++.|.+++.+|. ....+.......|.+|+
T Consensus 52 ~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~---~~~~~~~~~~~~~~~i~ 127 (286)
T 1q7f_A 52 RIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ---FVRKFGATILQHPRGVT 127 (286)
T ss_dssp EEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSC---EEEEECTTTCSCEEEEE
T ss_pred EEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCc---EEEEecCccCCCceEEE
Confidence 577787765 3322222 124579999998778899999964 789999997774 22333334557899999
Q ss_pred EecCCCeEEEEeCCCCeEEEEECCCCceEEEEe-cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe
Q psy13629 182 IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYW-EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD 260 (395)
Q Consensus 182 VD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~-~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~ 260 (395)
+|+ .++||+++...++|.+++.+|.....+.. ..+..|++|++|+ +|.||+++.. ..+|.+.+.+| .....+..
T Consensus 128 ~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~-~~~i~~~~~~g--~~~~~~~~ 202 (286)
T 1q7f_A 128 VDN-KGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVND-KQEIFISDNR-AHCVKVFNYEG--QYLRQIGG 202 (286)
T ss_dssp ECT-TSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECS-SSEEEEEEGG-GTEEEEEETTC--CEEEEESC
T ss_pred EeC-CCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECC-CCCEEEEECC-CCEEEEEcCCC--CEEEEEcc
Confidence 998 56799999989999999999876665542 3467899999998 5689999955 67899999988 43333332
Q ss_pred c-CCcCceeEEEeccccEEEEecccee-eeeeeccccceeee
Q psy13629 261 S-TIFWPNGIAIDFNNRLLYWIDGRLT-FIEVMDYDGYVRLV 300 (395)
Q Consensus 261 ~-~~~~P~glalD~~~~rLYwaD~~~~-~I~~~~~dG~~~~~ 300 (395)
. .+..|.+|++|. +++||+++...+ +|...+.+|.....
T Consensus 203 ~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g~~~~~ 243 (286)
T 1q7f_A 203 EGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDGQLISA 243 (286)
T ss_dssp TTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTSCEEEE
T ss_pred CCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCCCEEEE
Confidence 2 256899999995 468999998886 99999988865443
No 72
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.52 E-value=7.6e-13 Score=126.40 Aligned_cols=162 Identities=15% Similarity=0.153 Sum_probs=121.1
Q ss_pred CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe----CCCCCcceEEEecCCCeEEEEeCC---------
Q psy13629 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT----NGLITPDGLAIDWLTEKLYWTDSE--------- 195 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~----~~~~~p~glAVD~~~~~LYwtd~~--------- 195 (395)
..|.||++++.++.||++|.. +.|.+++.++. ..+.+.. ..+..|+++++|+..++||++|..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g---~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGSEGG---HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECTTCE---ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeCCCC---EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccc
Confidence 479999999867899999965 45888887753 2223321 124679999999756799999965
Q ss_pred --------CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc-ceEEEEecCCcCc
Q psy13629 196 --------TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR-HRKVIVDSTIFWP 266 (395)
Q Consensus 196 --------~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~-~~~~lv~~~~~~P 266 (395)
.++|.+++.++.....+. ..+..|++|+++++.+.||++|.. ..+|.+++++|... ..+.+.. ..+ |
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~-~~~I~~~~~~~~~~~~~~~~~~-~~g-P 231 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFL-SHQIVKYWLEGPKKGTAEVLVK-IPN-P 231 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGG-GTEEEEEESSSTTTTCEEEEEE-CSS-E
T ss_pred eehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCC-CCeEEEEECCCCcCCccceEEe-CCC-C
Confidence 267999999876665554 567889999999988899999965 67999999987322 2334443 223 9
Q ss_pred eeEEEeccccEEEEeccc----------eeeeeeeccccceee
Q psy13629 267 NGIAIDFNNRLLYWIDGR----------LTFIEVMDYDGYVRL 299 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~----------~~~I~~~~~dG~~~~ 299 (395)
+||++|. +++||+++.. .++|.+++.+|....
T Consensus 232 ~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~ 273 (322)
T 2fp8_A 232 GNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILE 273 (322)
T ss_dssp EEEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEE
T ss_pred CCeEECC-CCCEEEEecCcccccccCCCccEEEEECCCCCEEE
Confidence 9999995 5579999976 578999998876543
No 73
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.46 E-value=1.5e-12 Score=124.24 Aligned_cols=162 Identities=10% Similarity=0.053 Sum_probs=122.0
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC-------------------CCCCcceEEEecCCC
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-------------------GLITPDGLAIDWLTE 187 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~-------------------~~~~p~glAVD~~~~ 187 (395)
.+..|.++++|+. +.++|++..+++|++++.++. ....+... ....|.||++|...+
T Consensus 17 ~~~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 17 PSYAPNSFTFDST-NKGFYTSVQDGRVIKYEGPNS---GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp SSSCCCCEECCTT-CSSEEEECTTSEEEEECCTTT---CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred ccCCceEEEEcCC-CCEEEEEcCCCeEEEECCCCC---ceEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 3678999999986 557788888899999988764 22333221 124799999997689
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEec----CCCCceeEEEeCCCCeEEEEeeCC----------------CCeEEEEe
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWE----DIDQPRAIALVPQDSIMFWTDWGE----------------VPKIERGA 247 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~----~~~~P~~iavdp~~g~LYwtd~~~----------------~~~I~~~~ 247 (395)
+||++|.. +.|.++++++...+.+... .+..|+++++|+..|.||++|++. ..+|++.+
T Consensus 93 ~l~v~d~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 93 QLYIVDCY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp EEEEEETT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred cEEEEECC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 99999976 4589999887655555421 256799999998567999999652 25789988
Q ss_pred cCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 248 MNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 248 ~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
.++ ...+.+ ...+..|+||+++.+++.||++|...++|.++++++.
T Consensus 172 ~~~--~~~~~~-~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 172 PST--KETTLL-LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp TTT--TEEEEE-EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred CCC--CEEEEe-ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 875 233333 3446789999999888899999999999999998863
No 74
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.45 E-value=6.5e-12 Score=118.93 Aligned_cols=167 Identities=17% Similarity=0.259 Sum_probs=128.8
Q ss_pred CccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCe
Q psy13629 119 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNK 198 (395)
Q Consensus 119 ~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~ 198 (395)
.....+......+.|.+|++.++.|||+|...+.|++++.+|. .. ........|.++++|+ .++||+++...+.
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~----~~-~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT----VD-VLLDATAFTNGNAVDA-QQRLVHCEHGRRA 108 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC----EE-EEEESCSCEEEEEECT-TSCEEEEETTTTE
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC----EE-EEeCCCCccceeeECC-CCCEEEEECCCCE
Confidence 5677788888899999999999999999999999999988663 23 3333456799999998 5679999988889
Q ss_pred EEEEECCCCceEEEEec----CCCCceeEEEeCCCCeEEEEee--CC--------------CCeEEEEecCCCCcceEEE
Q psy13629 199 LEVSSLDGKKRKVLYWE----DIDQPRAIALVPQDSIMFWTDW--GE--------------VPKIERGAMNGDPRHRKVI 258 (395)
Q Consensus 199 I~v~~ldg~~~~~l~~~----~~~~P~~iavdp~~g~LYwtd~--~~--------------~~~I~~~~~dG~~~~~~~l 258 (395)
|.+++.+|+.. .+... .+..|+++++++ .|.||+||. +. ...|++++.++ ...+.+
T Consensus 109 v~~~~~~g~~~-~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~--g~~~~~ 184 (305)
T 3dr2_A 109 ITRSDADGQAH-LLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG--SPLQRM 184 (305)
T ss_dssp EEEECTTSCEE-EEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS--CCCEEE
T ss_pred EEEECCCCCEE-EEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCC--CcEEEE
Confidence 99999997643 33321 246799999998 678999874 11 35799999854 223333
Q ss_pred EecCCcCceeEEEeccccEEEEeccce-----eeeeeeccccce
Q psy13629 259 VDSTIFWPNGIAIDFNNRLLYWIDGRL-----TFIEVMDYDGYV 297 (395)
Q Consensus 259 v~~~~~~P~glalD~~~~rLYwaD~~~-----~~I~~~~~dG~~ 297 (395)
. .+..|+|++++.+++.|||+|... +.|.+.++++..
T Consensus 185 ~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 185 A--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp E--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred e--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 3 566899999999999999999863 788888877543
No 75
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.45 E-value=6.2e-12 Score=117.12 Aligned_cols=165 Identities=15% Similarity=0.214 Sum_probs=127.3
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-----CCCCCcceEEEecCCCeEEEEeCC-CCeEE
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-----NGLITPDGLAIDWLTEKLYWTDSE-TNKLE 200 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-----~~~~~p~glAVD~~~~~LYwtd~~-~~~I~ 200 (395)
.+..|.++++++.+ .||+++..+++|.+++.++. ....+.. ..+..|.+++++...++||+++.. .+.|.
T Consensus 28 ~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g~---~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 28 QFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEGR---FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp CBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTSC---EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred ccCCCceEEECCCC-CEEEEECCCCEEEEECCCCc---EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 45789999999865 59999988899999998864 2222221 134679999997678999999965 78999
Q ss_pred EEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe-cCCcCceeEEEeccccEEE
Q psy13629 201 VSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD-STIFWPNGIAIDFNNRLLY 279 (395)
Q Consensus 201 v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~-~~~~~P~glalD~~~~rLY 279 (395)
+++.+|+....+.......|++|++++. |.||+++.. ..+|.+.+.+| .....+.. .....|++|++|. +++||
T Consensus 104 ~~d~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~-~~~i~~~~~~g--~~~~~~~~~~~~~~p~~i~~~~-~g~l~ 178 (286)
T 1q7f_A 104 IYNQYGQFVRKFGATILQHPRGVTVDNK-GRIIVVECK-VMRVIIFDQNG--NVLHKFGCSKHLEFPNGVVVND-KQEIF 178 (286)
T ss_dssp EECTTSCEEEEECTTTCSCEEEEEECTT-SCEEEEETT-TTEEEEECTTS--CEEEEEECTTTCSSEEEEEECS-SSEEE
T ss_pred EECCCCcEEEEecCccCCCceEEEEeCC-CCEEEEECC-CCEEEEEcCCC--CEEEEeCCCCccCCcEEEEECC-CCCEE
Confidence 9998887766554345678999999985 579999954 67899999888 43333332 3456899999995 46799
Q ss_pred Eeccceeeeeeeccccceeee
Q psy13629 280 WIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 280 waD~~~~~I~~~~~dG~~~~~ 300 (395)
+++...++|.+.+.+|.....
T Consensus 179 v~~~~~~~i~~~~~~g~~~~~ 199 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYEGQYLRQ 199 (286)
T ss_dssp EEEGGGTEEEEEETTCCEEEE
T ss_pred EEECCCCEEEEEcCCCCEEEE
Confidence 999999999999988865443
No 76
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.44 E-value=1.4e-11 Score=118.32 Aligned_cols=180 Identities=14% Similarity=0.075 Sum_probs=131.3
Q ss_pred EEEEeeCCCCCccEEecCCCC------CeEEEEEEcCCCEEEEEECC-CCeEEEEEccCCCCCceEEEEeCCCCCcceEE
Q psy13629 109 DIRIANLSRPLKPVTIIKDLE------EGAAIDYYYKKSMVCWTDHG-TEMISCCTFDGNNVGSKHNVITNGLITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~------~~~gl~~d~~~~~lywsd~~-~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glA 181 (395)
.|.++|+.. .+.....+... .|.+|++ .+++||+++.+ ++.|.+++.+.. .....+. ....|.+++
T Consensus 106 ~v~~iD~~t-~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~---~~~~~i~-~g~~p~~i~ 178 (328)
T 3dsm_A 106 RIFIINPKT-YEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETD---KVVDELT-IGIQPTSLV 178 (328)
T ss_dssp EEEEEETTT-TEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTT---EEEEEEE-CSSCBCCCE
T ss_pred eEEEEECCC-CeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCC---eEEEEEE-cCCCccceE
Confidence 578888766 44433333333 7889999 47899999984 889999998864 2222222 245799999
Q ss_pred EecCCCeEEEEeCCC----------CeEEEEECCCCceEEEEe-cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 182 IDWLTEKLYWTDSET----------NKLEVSSLDGKKRKVLYW-EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 182 VD~~~~~LYwtd~~~----------~~I~v~~ldg~~~~~l~~-~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
+|+ .+++|+++... +.|.+.+.++......+. .....|++|+++|++++||+++. .|++++.+.
T Consensus 179 ~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----~v~~~d~~t 253 (328)
T 3dsm_A 179 MDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----DIWRMPVEA 253 (328)
T ss_dssp ECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS----SEEEEETTC
T ss_pred EcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc----EEEEEECCC
Confidence 997 67799998765 799999998655443332 23468999999999999999982 799999875
Q ss_pred CCcceEEEEecCCcCceeEEEeccccEEEEec----cceeeeeeeccccceeee
Q psy13629 251 DPRHRKVIVDSTIFWPNGIAIDFNNRLLYWID----GRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 251 ~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD----~~~~~I~~~~~dG~~~~~ 300 (395)
.......++......|.||++|+.+++||+++ ...++|.+++.+|.....
T Consensus 254 ~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~ 307 (328)
T 3dsm_A 254 DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDE 307 (328)
T ss_dssp SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEE
T ss_pred CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEE
Confidence 21111112222246799999998899999999 788999999999766655
No 77
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=1.9e-11 Score=113.54 Aligned_cols=178 Identities=15% Similarity=0.092 Sum_probs=131.4
Q ss_pred EEEEeeCCCCCccEEecC-CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CCCCCcceEEEecCC
Q psy13629 109 DIRIANLSRPLKPVTIIK-DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~-~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~~ 186 (395)
.|.+++.++ .......+ ....+.++++|+. ++||+++...+.|.+++.+|. ...... .....|.+|++|. .
T Consensus 84 ~v~~~d~~g-~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~d~-~ 156 (300)
T 2qc5_A 84 KIGKLSKKG-GFTEYPLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTADGT----IYEYDLPNKGSYPAFITLGS-D 156 (300)
T ss_dssp EEEEECTTS-CEEEEECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTTSC----EEEEECSSTTCCEEEEEECT-T
T ss_pred eEEEECCCC-CeEEecCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCCCC----EEEccCCCCCCCceeEEECC-C
Confidence 467777664 22222222 3477999999964 569999987889999998853 232322 3467899999997 5
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
++||+++...+.|.+++.+|.............|.+|++|+ +|.||+++.. ...|.+.+.+| .............|
T Consensus 157 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~-~~~i~~~~~~g--~~~~~~~~~~~~~~ 232 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIM-GNKIGRITTTG--EISEYDIPTPNARP 232 (300)
T ss_dssp SSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETT-TTEEEEECTTC--CEEEEECSSTTCCE
T ss_pred CCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECC-CCCEEEEccC-CCEEEEEcCCC--cEEEEECCCCCCCc
Confidence 66999998889999999977765433324567899999998 5789999954 67899999977 33333333456689
Q ss_pred eeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
.+|++|.. ++||+++...+.|.+++.+|...
T Consensus 233 ~~i~~d~~-g~l~v~~~~~~~i~~~~~~g~~~ 263 (300)
T 2qc5_A 233 HAITAGKN-SEIWFTEWGANQIGRITNDNTIQ 263 (300)
T ss_dssp EEEEECST-TCEEEEETTTTEEEEECTTSCEE
T ss_pred eEEEECCC-CCEEEeccCCCeEEEECCCCcEE
Confidence 99999955 67999998889999999876443
No 78
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.41 E-value=2.1e-11 Score=113.17 Aligned_cols=172 Identities=15% Similarity=0.149 Sum_probs=127.4
Q ss_pred EEEEeeCCCCCccEEec-CCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CCCCCcceEEEecCC
Q psy13629 109 DIRIANLSRPLKPVTII-KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~-~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~~ 186 (395)
.|.+++.++ ....... .....+.++++|+.++ ||+++...+.|.+++.++. ...+.. .....|.+|++|. .
T Consensus 126 ~i~~~~~~g-~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~d~-~ 198 (300)
T 2qc5_A 126 RIGKLTADG-TIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITNTGK----LEEYPLPTNAAAPVGITSGN-D 198 (300)
T ss_dssp EEEEECTTS-CEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECT-T
T ss_pred eEEEECCCC-CEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECCCCc----EEEeeCCCCCCCcceEEECC-C
Confidence 467777764 2222222 2467899999998765 9999988899999998664 222322 3467899999997 6
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
++||+++...+.|.+++.+|.............|.+|++|+. |.||+++++ ...|.+++.+| .-....+......|
T Consensus 199 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~-~~~i~~~~~~g--~~~~~~~~~~~~~~ 274 (300)
T 2qc5_A 199 GALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKN-SEIWFTEWG-ANQIGRITNDN--TIQEYQLQTENAEP 274 (300)
T ss_dssp SSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECST-TCEEEEETT-TTEEEEECTTS--CEEEEECCSTTCCC
T ss_pred CCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECCC-CCEEEeccC-CCeEEEECCCC--cEEEEECCccCCcc
Confidence 799999998899999999777655444345788999999986 679999955 67899999977 33333333345689
Q ss_pred eeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
.+|++|. +++||+++. . .|.+++++
T Consensus 275 ~~i~~~~-~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 275 HGITFGK-DGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CCEEECT-TSCEEEECS-S-EEEEEEEC
T ss_pred ceeEeCC-CCCEEEEcc-C-ceEEeCCC
Confidence 9999995 467999998 4 78777653
No 79
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.41 E-value=2e-11 Score=115.91 Aligned_cols=177 Identities=8% Similarity=0.025 Sum_probs=127.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCC--eEEEEEccCCCCCceEEEEe-CCCCCcceEEEecC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTE--MISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~--~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~ 185 (395)
.|.+++.++ . ..........+.||++++.++ ||++|...+ +|.+++.... ....+.. .....++|+++ |.
T Consensus 54 ~I~~~d~~g-~-~~~~~~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g---~~~~~~~~~~~~~~~g~~~-~~ 126 (306)
T 2p4o_A 54 EIVSITPDG-N-QQIHATVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDG---TVETLLTLPDAIFLNGITP-LS 126 (306)
T ss_dssp EEEEECTTC-C-EEEEEECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTS---CEEEEEECTTCSCEEEEEE-SS
T ss_pred eEEEECCCC-c-eEEEEeCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCC---eEEEEEeCCCccccCcccc-cC
Confidence 577777766 2 333344456899999998765 899996543 5888775443 2333332 34566889987 56
Q ss_pred CCeEEEEeCCCCeEEEEECCCCceEEE-E---------ecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC--CCc
Q psy13629 186 TEKLYWTDSETNKLEVSSLDGKKRKVL-Y---------WEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG--DPR 253 (395)
Q Consensus 186 ~~~LYwtd~~~~~I~v~~ldg~~~~~l-~---------~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG--~~~ 253 (395)
.+.+|++|...++|++++.++...++. . ...+..|+|| +++.++||++|.. ..+|.++++++ ...
T Consensus 127 ~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~-~~~I~~~~~~~~g~~~ 203 (306)
T 2p4o_A 127 DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE-KMLLLRIPVDSTDKPG 203 (306)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT-TTEEEEEEBCTTSCBC
T ss_pred CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC-CCEEEEEEeCCCCCCC
Confidence 889999998889999999876432221 1 1245689998 7778899999955 78999999984 223
Q ss_pred ceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 254 HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 254 ~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
.++++.. ...|.||++|. +++||+++...++|.+++.+|...
T Consensus 204 ~~~~~~~--~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~G~~~ 245 (306)
T 2p4o_A 204 EPEIFVE--QTNIDDFAFDV-EGNLYGATHIYNSVVRIAPDRSTT 245 (306)
T ss_dssp CCEEEEE--SCCCSSEEEBT-TCCEEEECBTTCCEEEECTTCCEE
T ss_pred ccEEEec--cCCCCCeEECC-CCCEEEEeCCCCeEEEECCCCCEE
Confidence 3444443 35799999995 468999999999999999987643
No 80
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.40 E-value=1.5e-11 Score=116.02 Aligned_cols=179 Identities=11% Similarity=0.015 Sum_probs=127.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC----CCCCcceEEEec
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN----GLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~----~~~~p~glAVD~ 184 (395)
.|.+++.++ .... .......+.++++++.++ ||++. .+.|.+++.++. ..+.+... ....|+++++|+
T Consensus 36 ~i~~~d~~~-~~~~-~~~~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g---~~~~~~~~~~~~~~~~~~di~~d~ 107 (297)
T 3g4e_A 36 KVCRWDSFT-KQVQ-RVTMDAPVSSVALRQSGG-YVATI--GTKFCALNWKEQ---SAVVLATVDNDKKNNRFNDGKVDP 107 (297)
T ss_dssp EEEEEETTT-CCEE-EEECSSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTT---EEEEEEECCTTCSSEEEEEEEECT
T ss_pred EEEEEECCC-CcEE-EEeCCCceEEEEECCCCC-EEEEE--CCeEEEEECCCC---cEEEEEecCCCCCCCCCCCEEECC
Confidence 667788776 3332 223346789999998877 66665 568999998764 33334332 235689999998
Q ss_pred CCCeEEEEeC-----------CCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecC---C
Q psy13629 185 LTEKLYWTDS-----------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMN---G 250 (395)
Q Consensus 185 ~~~~LYwtd~-----------~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~d---G 250 (395)
.++||+++. ..+.|++++.+|+... + ...+..|++|+++|+.+.|||++.. ..+|.+.+++ |
T Consensus 108 -dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~-~~~~~~pngi~~spdg~~lyv~~~~-~~~i~~~~~d~~~G 183 (297)
T 3g4e_A 108 -AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-Y-FDQVDISNGLDWSLDHKIFYYIDSL-SYSVDAFDYDLQTG 183 (297)
T ss_dssp -TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-E-EEEESBEEEEEECTTSCEEEEEEGG-GTEEEEEEECTTTC
T ss_pred -CCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-E-eeccccccceEEcCCCCEEEEecCC-CCcEEEEeccCCCC
Confidence 567999873 3457888888775443 3 3567889999999999999999944 6789999875 3
Q ss_pred CCcceEEEEec--CCcCceeEEEeccccEEEEeccceeeeeeeccc-cceeee
Q psy13629 251 DPRHRKVIVDS--TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD-GYVRLV 300 (395)
Q Consensus 251 ~~~~~~~lv~~--~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d-G~~~~~ 300 (395)
...+++.+... ....|.||++|. +++||+++...++|.+++.+ |.....
T Consensus 184 ~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 184 QISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp CEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred cccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 22234455442 245799999995 46899999888999999997 654443
No 81
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.39 E-value=3.5e-11 Score=113.54 Aligned_cols=158 Identities=13% Similarity=0.066 Sum_probs=121.3
Q ss_pred ecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEE
Q psy13629 124 IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSS 203 (395)
Q Consensus 124 ~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ 203 (395)
+.....-+.|..|++.++.|||+|...++|++++.++. ...... ....|.++++|+. ++||++. .+.|.+++
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~---~~~~~~--~~~~~~~i~~~~d-G~l~v~~--~~~l~~~d 79 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK---QVQRVT--MDAPVSSVALRQS-GGYVATI--GTKFCALN 79 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTC---CEEEEE--CSSCEEEEEEBTT-SSEEEEE--TTEEEEEE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCC---cEEEEe--CCCceEEEEECCC-CCEEEEE--CCeEEEEE
Confidence 34456678999999999999999999999999999875 222222 2357999999985 5587776 46899999
Q ss_pred CCCCceEEEEec----CCCCceeEEEeCCCCeEEEEeeCC----------CCeEEEEecCCCCcceEEEEecCCcCceeE
Q psy13629 204 LDGKKRKVLYWE----DIDQPRAIALVPQDSIMFWTDWGE----------VPKIERGAMNGDPRHRKVIVDSTIFWPNGI 269 (395)
Q Consensus 204 ldg~~~~~l~~~----~~~~P~~iavdp~~g~LYwtd~~~----------~~~I~~~~~dG~~~~~~~lv~~~~~~P~gl 269 (395)
+++...+.+... ....|+++++||. |.||+++++. ..+|++++.+| .... +...+..|+|+
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g--~~~~--~~~~~~~pngi 154 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDH--HVKK--YFDQVDISNGL 154 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTS--CEEE--EEEEESBEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCC--CEEE--Eeeccccccce
Confidence 987666655532 2356899999984 6699988642 24799998887 3332 33456689999
Q ss_pred EEeccccEEEEeccceeeeeeeccc
Q psy13629 270 AIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 270 alD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
+++.+++.|||+|...++|.+.+++
T Consensus 155 ~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred EEcCCCCEEEEecCCCCcEEEEecc
Confidence 9999999999999999999998875
No 82
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.39 E-value=3.5e-11 Score=112.79 Aligned_cols=163 Identities=16% Similarity=0.120 Sum_probs=127.4
Q ss_pred CccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCe
Q psy13629 119 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNK 198 (395)
Q Consensus 119 ~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~ 198 (395)
.....+......+.|++||+.++.|||++...+.|++++.++. ..........|.+|++|+ .++||+++...+.
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-----LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRR 91 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-----EEEEESSCSSEEEEEECT-TCCEEEEETTTTE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-----eEEEECCCCCcceeeECC-CCcEEEEecCCCe
Confidence 4566777788889999999999999999999999999999874 233344556799999998 6779999988899
Q ss_pred EEEEEC-CCCceEEEEec----CCCCceeEEEeCCCCeEEEEeeC----------------CCCeEEEEecCCCCcceEE
Q psy13629 199 LEVSSL-DGKKRKVLYWE----DIDQPRAIALVPQDSIMFWTDWG----------------EVPKIERGAMNGDPRHRKV 257 (395)
Q Consensus 199 I~v~~l-dg~~~~~l~~~----~~~~P~~iavdp~~g~LYwtd~~----------------~~~~I~~~~~dG~~~~~~~ 257 (395)
|.+.++ +|+ .+.+... ....|+++++|| .|.||+||.. ....|++++.+| .-.
T Consensus 92 i~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g--~~~-- 165 (296)
T 3e5z_A 92 LERQREPGGE-WESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG--TLS-- 165 (296)
T ss_dssp EEEECSTTCC-EEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS--CEE--
T ss_pred EEEEcCCCCc-EEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCC--CEE--
Confidence 999999 554 3343321 246789999998 6689998741 135899998886 322
Q ss_pred EEecCCcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 258 IVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 258 lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
.+......|+|++++++++.| |++...++|.+.+++
T Consensus 166 ~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLN 201 (296)
T ss_dssp EEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEEC
T ss_pred EeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEEC
Confidence 334567789999999888777 999988999998885
No 83
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.38 E-value=5.1e-11 Score=110.55 Aligned_cols=176 Identities=13% Similarity=0.083 Sum_probs=128.2
Q ss_pred EEEEeeCCCCCccEEecC-CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE-eCCCCCcceEEEecCC
Q psy13629 109 DIRIANLSRPLKPVTIIK-DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-TNGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~-~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~-~~~~~~p~glAVD~~~ 186 (395)
.|.+++.++ .......+ ....+.++++|+. +.||+++...+.|.+++.++. ...+. ......|.+|++|. .
T Consensus 79 ~i~~~~~~g-~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~~g~----~~~~~~~~~~~~~~~i~~~~-~ 151 (299)
T 2z2n_A 79 KIGRITKKG-IIKEYTLPNPDSAPYGITEGPN-GDIWFTEMNGNRIGRITDDGK----IREYELPNKGSYPSFITLGS-D 151 (299)
T ss_dssp EEEEECTTS-CEEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECT-T
T ss_pred eEEEECCCC-cEEEEeCCCcCCCceeeEECCC-CCEEEEecCCceEEEECCCCC----EEEecCCCCCCCCceEEEcC-C
Confidence 466677654 22222222 4568999999975 579999988889999988653 23232 23456899999997 5
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
++||+++...+.|.+++.+|+............|.+|++|+. |.||++++. ...|.+++.+| .............|
T Consensus 152 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~-~~~i~~~~~~g--~~~~~~~~~~~~~~ 227 (299)
T 2z2n_A 152 NALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGND-DALWFVEII-GNKIGRITTSG--EITEFKIPTPNARP 227 (299)
T ss_dssp SCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-SSEEEEETT-TTEEEEECTTC--CEEEEECSSTTCCE
T ss_pred CCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCC-CCEEEEccC-CceEEEECCCC--cEEEEECCCCCCCc
Confidence 799999988899999999666544333345778999999985 679999854 67899999976 33322233345689
Q ss_pred eeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
.+|++|.. ++||+++...+.|.+++.+|.
T Consensus 228 ~~i~~~~~-g~l~v~~~~~~~i~~~d~~g~ 256 (299)
T 2z2n_A 228 HAITAGAG-IDLWFTEWGANKIGRLTSNNI 256 (299)
T ss_dssp EEEEECST-TCEEEEETTTTEEEEEETTTE
T ss_pred eeEEECCC-CCEEEeccCCceEEEECCCCc
Confidence 99999954 679999988889999998764
No 84
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.37 E-value=1e-10 Score=109.54 Aligned_cols=177 Identities=13% Similarity=0.095 Sum_probs=129.1
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe--C--CCCCcceEEEec
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT--N--GLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~--~--~~~~p~glAVD~ 184 (395)
.|.+++.++ . ...+......+.++++++.++ ||+++...+.|.+++.+.. ....+.. . ....|+++++|+
T Consensus 51 ~i~~~~~~~-~-~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~ 124 (296)
T 3e5z_A 51 RTWAWSDDG-Q-LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGG---EWESIADSFEGKKLNSPNDVCLAP 124 (296)
T ss_dssp EEEEEETTS-C-EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTC---CEEEEECEETTEECCCCCCEEECT
T ss_pred EEEEEECCC-C-eEEEECCCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCC---cEEEEeeccCCCCCCCCCCEEECC
Confidence 678888877 3 555556677899999998654 8899877889999998433 2233321 1 245789999998
Q ss_pred CCCeEEEEeC-----------------CCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEe
Q psy13629 185 LTEKLYWTDS-----------------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGA 247 (395)
Q Consensus 185 ~~~~LYwtd~-----------------~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~ 247 (395)
.++||++|. ..+.|++++.+|.. ..+ ......|++++++|+++.| |++. ...+|.+.+
T Consensus 125 -~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~~-~~~~~~~~gi~~s~dg~~l-v~~~-~~~~i~~~~ 199 (296)
T 3e5z_A 125 -DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTL-SAP-IRDRVKPNGLAFLPSGNLL-VSDT-GDNATHRYC 199 (296)
T ss_dssp -TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCE-EEE-ECCCSSEEEEEECTTSCEE-EEET-TTTEEEEEE
T ss_pred -CCCEEEECCccccccccccccccccCCCcEEEEECCCCCE-EEe-ecCCCCCccEEECCCCCEE-EEeC-CCCeEEEEE
Confidence 678999874 13589999988543 333 3678899999999988888 9994 467899999
Q ss_pred cC--CCC-cceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeee
Q psy13629 248 MN--GDP-RHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 248 ~d--G~~-~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
++ |.. ...+++ ......|.+|++|. +++||+++ .+.|.+.+.+|.....
T Consensus 200 ~~~~g~~~~~~~~~-~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~g~~~~~ 251 (296)
T 3e5z_A 200 LNARGETEYQGVHF-TVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPDGDELGR 251 (296)
T ss_dssp ECSSSCEEEEEEEE-CCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTTSCEEEE
T ss_pred ECCCCcCcCCCeEe-eCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCCCCEEEE
Confidence 85 422 224444 44566899999995 56799998 6789999988765443
No 85
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.37 E-value=1e-10 Score=108.43 Aligned_cols=177 Identities=18% Similarity=0.140 Sum_probs=129.9
Q ss_pred EEEEeeCCCCCccEEe-cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CCCCCcceEEEecCC
Q psy13629 109 DIRIANLSRPLKPVTI-IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~-~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~~ 186 (395)
.|.+++.++ ...... ......+.++++|+. +.||+++...+.|.+++.++. ...+.. .....|.+|++|+ .
T Consensus 37 ~v~~~d~~~-~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~~~-~ 109 (299)
T 2z2n_A 37 MISCINLDG-KITEYPLPTPDAKVMCLTISSD-GEVWFTENAANKIGRITKKGI----IKEYTLPNPDSAPYGITEGP-N 109 (299)
T ss_dssp EEEEECTTC-CEEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECTTSC----EEEEECSSTTCCEEEEEECT-T
T ss_pred cEEEEcCCC-CeEEecCCcccCceeeEEECCC-CCEEEeCCCCCeEEEECCCCc----EEEEeCCCcCCCceeeEECC-C
Confidence 477777763 222222 224578999999975 569999877889999998853 233332 2456899999997 6
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
++||+++...+.|.+++++|.............|++|++|+ +|.||+++.. ...|.+.+.+| .............|
T Consensus 110 g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-~~~i~~~~~~g--~~~~~~~~~~~~~~ 185 (299)
T 2z2n_A 110 GDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGS-DNALWFTENQ-NNAIGRITESG--DITEFKIPTPASGP 185 (299)
T ss_dssp SCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETT-TTEEEEECTTC--CEEEEECSSTTCCE
T ss_pred CCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCC-CCEEEEEcCCC--cEEEeeCCCCCCcc
Confidence 79999998889999999977665444434567899999997 4689999854 57899999866 33332233445679
Q ss_pred eeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
.+|++|.. ++||+++...+.|.+++.+|..
T Consensus 186 ~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~ 215 (299)
T 2z2n_A 186 VGITKGND-DALWFVEIIGNKIGRITTSGEI 215 (299)
T ss_dssp EEEEECTT-SSEEEEETTTTEEEEECTTCCE
T ss_pred eeEEECCC-CCEEEEccCCceEEEECCCCcE
Confidence 99999954 6799999888899999986653
No 86
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=4.9e-11 Score=115.07 Aligned_cols=166 Identities=15% Similarity=0.080 Sum_probs=120.0
Q ss_pred CCCCeEEEEEEcCCCEEEEEECC-----CCeEEEEEccCCCCCceEEEEeC-----CCCCcceEEEecCCCeEEEEeC--
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHG-----TEMISCCTFDGNNVGSKHNVITN-----GLITPDGLAIDWLTEKLYWTDS-- 194 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~-----~~~I~~~~~dg~~~~~~~~i~~~-----~~~~p~glAVD~~~~~LYwtd~-- 194 (395)
.+..+.++++|+. ++|||+|.. ..+|.+++++... ....+... ....|++|+||..++.+|++|.
T Consensus 65 ~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 65 TFDTVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCSCEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred ceeEeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCcc
Confidence 4678999999986 679999976 5799999987541 12333322 1246899999988899999998
Q ss_pred -CCCeEEEEECCCCceEEEEec-----------------------------CCCCceeEEEeCCCCeEEEEeeCCCCeEE
Q psy13629 195 -ETNKLEVSSLDGKKRKVLYWE-----------------------------DIDQPRAIALVPQDSIMFWTDWGEVPKIE 244 (395)
Q Consensus 195 -~~~~I~v~~ldg~~~~~l~~~-----------------------------~~~~P~~iavdp~~g~LYwtd~~~~~~I~ 244 (395)
..+.|.++++++.....++.. ....|+||+++|+.+.||+++.. ..+|+
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~-~~~l~ 220 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH-STSMY 220 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS-CSEEE
T ss_pred CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC-CCeEE
Confidence 788999999874433332211 01358999999998899999965 56899
Q ss_pred EEecC----CCCcceE-----EEEecCCcCceeEEEeccccEEEEeccceeeeeeecc-cccee
Q psy13629 245 RGAMN----GDPRHRK-----VIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY-DGYVR 298 (395)
Q Consensus 245 ~~~~d----G~~~~~~-----~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~-dG~~~ 298 (395)
+++.+ +.....+ ... .+...|+||++|. +++||++++..++|.+.+. +|...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~ 282 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYK 282 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEE
T ss_pred EEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEE
Confidence 98853 2111111 111 1234799999995 5799999999999999999 77543
No 87
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.35 E-value=2.3e-10 Score=109.71 Aligned_cols=177 Identities=14% Similarity=0.052 Sum_probs=128.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCC----CCCcceEEEec
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG----LITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~----~~~p~glAVD~ 184 (395)
.|.++|... .+.....+....|.++++++.+ +||+++..++.|.+++.+... ....+.... ...|.+|+++
T Consensus 65 ~v~viD~~t-~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~--~~~~i~~g~~~~~~~~p~~i~~~- 139 (328)
T 3dsm_A 65 VIFAIDINT-FKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYE--ITGYIECPDMDMESGSTEQMVQY- 139 (328)
T ss_dssp EEEEEETTT-CCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTE--EEEEEECTTCCTTTCBCCCEEEE-
T ss_pred EEEEEECcc-cEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCe--EEEEEEcCCccccCCCcceEEEE-
Confidence 678888876 3443333567899999998765 899999778999999988642 112222222 1279999994
Q ss_pred CCCeEEEEeCC-CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCC---------CCeEEEEecCCCCcc
Q psy13629 185 LTEKLYWTDSE-TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGE---------VPKIERGAMNGDPRH 254 (395)
Q Consensus 185 ~~~~LYwtd~~-~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~---------~~~I~~~~~dG~~~~ 254 (395)
+++||+++.+ .++|.+.|+........+ .....|.+++++| .|.+|+++++. ...|.+++.+.. .-
T Consensus 140 -~~~lyv~~~~~~~~v~viD~~t~~~~~~i-~~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~-~v 215 (328)
T 3dsm_A 140 -GKYVYVNCWSYQNRILKIDTETDKVVDEL-TIGIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETF-TV 215 (328)
T ss_dssp -TTEEEEEECTTCCEEEEEETTTTEEEEEE-ECSSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT-EE
T ss_pred -CCEEEEEcCCCCCEEEEEECCCCeEEEEE-EcCCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCC-eE
Confidence 8999999984 889999999876555444 3456899999998 56799998663 368999998752 21
Q ss_pred eEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 255 RKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 255 ~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
.+.+.......|++|+++.++++||+++. .|.+++.+...
T Consensus 216 ~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~ 255 (328)
T 3dsm_A 216 EKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADR 255 (328)
T ss_dssp EEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSS
T ss_pred EEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCc
Confidence 22222111247999999999999999996 78888876544
No 88
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.33 E-value=3.5e-11 Score=117.26 Aligned_cols=159 Identities=22% Similarity=0.147 Sum_probs=117.9
Q ss_pred ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE-----eCCCCCcceEEEecC---CCeEEE
Q psy13629 120 KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-----TNGLITPDGLAIDWL---TEKLYW 191 (395)
Q Consensus 120 ~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~-----~~~~~~p~glAVD~~---~~~LYw 191 (395)
+.+.+...+..|.+|++++++ +||+++.. ++|++++.+| . +.+. ..+...|.|||+++. ++.||+
T Consensus 20 ~~~~va~~l~~P~~ia~~pdG-~l~V~e~~-g~I~~~d~~G----~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv 92 (354)
T 3a9g_A 20 KISEVASDLEVPWSIAPLGGG-RYLVTERP-GRLVLISPSG----K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYL 92 (354)
T ss_dssp EEEEEECSCSCEEEEEEEETT-EEEEEETT-TEEEEECSSC----E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred EEEEEeCCCCCCeEEEEcCCC-eEEEEeCC-CEEEEEeCCC----c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEE
Confidence 455667778999999999864 69999965 8999996554 2 2222 234567999999997 799999
Q ss_pred EeCC---C----CeEEEEECCCC-----ceEEEEe----cCCCCceeEEEeCCCCeEEEEeeCC-------------CCe
Q psy13629 192 TDSE---T----NKLEVSSLDGK-----KRKVLYW----EDIDQPRAIALVPQDSIMFWTDWGE-------------VPK 242 (395)
Q Consensus 192 td~~---~----~~I~v~~ldg~-----~~~~l~~----~~~~~P~~iavdp~~g~LYwtd~~~-------------~~~ 242 (395)
++.. . ++|.++++++. ..++++. ...+.|++|+++| .|+||+++ +. ..+
T Consensus 93 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~-G~~~~~~~~~d~~~~~G~ 170 (354)
T 3a9g_A 93 YASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITT-GDAADPRLAQDLSSLAGK 170 (354)
T ss_dssp EEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEEC-CCTTCGGGGTCTTCCSSE
T ss_pred EEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEE-CCCCCCccccCCCCCCeE
Confidence 9863 3 68999998876 2344432 2356799999999 56899997 31 258
Q ss_pred EEEEecCCCCc-----ceEEEEecCCcCceeEEEeccccEEEEeccceee
Q psy13629 243 IERGAMNGDPR-----HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTF 287 (395)
Q Consensus 243 I~~~~~dG~~~-----~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~ 287 (395)
|.|++.||..- ....++...+..|+||++|..+++||++|...+.
T Consensus 171 I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~ 220 (354)
T 3a9g_A 171 ILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVG 220 (354)
T ss_dssp EEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSS
T ss_pred EEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCC
Confidence 99999999310 0223455677899999999878999999987654
No 89
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.32 E-value=5e-11 Score=116.02 Aligned_cols=161 Identities=18% Similarity=0.142 Sum_probs=118.2
Q ss_pred CccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE-----eCCCCCcceEEEecC---CCeEE
Q psy13629 119 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-----TNGLITPDGLAIDWL---TEKLY 190 (395)
Q Consensus 119 ~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~-----~~~~~~p~glAVD~~---~~~LY 190 (395)
.+.+.++..+..|.+|+++++++ ||+++.. ++|++++ +|. .+.+. ..+...|.|||+++. ++.||
T Consensus 21 ~~~~~va~~l~~P~~ia~~pdG~-l~V~e~~-g~I~~i~-~g~----~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lY 93 (352)
T 2ism_A 21 LRVEEVVGGLEVPWALAFLPDGG-MLIAERP-GRIRLFR-EGR----LSTYAELSVYHRGESGLLGLALHPRFPQEPYVY 93 (352)
T ss_dssp CCEEEEECCCSCEEEEEECTTSC-EEEEETT-TEEEEEE-TTE----EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEE
T ss_pred cEEEEEECCCCCceEEEEcCCCe-EEEEeCC-CeEEEEE-CCC----ccEeecceEeecCCCCceeEEECCCCCCCCEEE
Confidence 34566777889999999998765 9999965 8999998 653 22222 234678999999997 78999
Q ss_pred EEeCCC-----CeEEEEECCCC---ceEEEEe------cCCCCceeEEEeCCCCeEEEEeeC------------CCCeEE
Q psy13629 191 WTDSET-----NKLEVSSLDGK---KRKVLYW------EDIDQPRAIALVPQDSIMFWTDWG------------EVPKIE 244 (395)
Q Consensus 191 wtd~~~-----~~I~v~~ldg~---~~~~l~~------~~~~~P~~iavdp~~g~LYwtd~~------------~~~~I~ 244 (395)
+++... ++|.++++++. ..++++. ...+.|.+|+++| .|+||+++.. ...+|.
T Consensus 94 v~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ 172 (352)
T 2ism_A 94 AYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKIL 172 (352)
T ss_dssp EEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEE
T ss_pred EEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEE
Confidence 999754 78999999864 2334442 2246799999999 5699999732 125899
Q ss_pred EEecCCCCc----------ceEEEEecCCcCceeEEEeccccEEEEeccceee
Q psy13629 245 RGAMNGDPR----------HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTF 287 (395)
Q Consensus 245 ~~~~dG~~~----------~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~ 287 (395)
|++.+|..- ....++...+..|+||++|..+++||++|...+.
T Consensus 173 ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~ 225 (352)
T 2ism_A 173 RLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSG 225 (352)
T ss_dssp EECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC--
T ss_pred EEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCC
Confidence 999998210 1223445567889999999878999999987766
No 90
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.32 E-value=1.3e-10 Score=110.01 Aligned_cols=179 Identities=18% Similarity=0.243 Sum_probs=128.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC----CCCCcceEEEec
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN----GLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~----~~~~p~glAVD~ 184 (395)
.|.+++.++ ....+......+.++++|+.++ ||+++...+.|.+++.+|. ...+... .+..|+++++|+
T Consensus 68 ~i~~~~~~g--~~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~g~----~~~~~~~~~~~~~~~~~~i~~d~ 140 (305)
T 3dr2_A 68 RVLGWREDG--TVDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSDADGQ----AHLLVGRYAGKRLNSPNDLIVAR 140 (305)
T ss_dssp EEEEEETTS--CEEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSC----EEEEECEETTEECSCCCCEEECT
T ss_pred EEEEEeCCC--CEEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEECCCCC----EEEEEeccCCCccCCCCCEEECC
Confidence 567777654 3445555667899999998765 8888877889999998864 2333221 246799999997
Q ss_pred CCCeEEEEeC-----------------CCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCC----CCeE
Q psy13629 185 LTEKLYWTDS-----------------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGE----VPKI 243 (395)
Q Consensus 185 ~~~~LYwtd~-----------------~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~----~~~I 243 (395)
.++||+||. ..+.|++++.++...+.+. .+..|++++++|+.+.|||++... ..+|
T Consensus 141 -dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i 217 (305)
T 3dr2_A 141 -DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEI 217 (305)
T ss_dssp -TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEE
T ss_pred -CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEE
Confidence 778999874 1357899998644444443 677899999999999999999542 3689
Q ss_pred EEEecCCCC-cceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceeee
Q psy13629 244 ERGAMNGDP-RHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 244 ~~~~~dG~~-~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
.+.++++.. .+.+.+.......|.||++|. +++||+++. +.|.+++.+|.....
T Consensus 218 ~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~-~G~lwv~~~--~gv~~~~~~g~~~~~ 272 (305)
T 3dr2_A 218 TAFAWRDGALHDRRHFASVPDGLPDGFCVDR-GGWLWSSSG--TGVCVFDSDGQLLGH 272 (305)
T ss_dssp EEEEEETTEEEEEEEEECCSSSCCCSEEECT-TSCEEECCS--SEEEEECTTSCEEEE
T ss_pred EEEEecCCCccCCeEEEECCCCCCCeEEECC-CCCEEEecC--CcEEEECCCCCEEEE
Confidence 999987621 233445444456799999995 456888873 458888888765443
No 91
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.31 E-value=1e-09 Score=104.18 Aligned_cols=183 Identities=10% Similarity=0.022 Sum_probs=136.3
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCC--------CcceE
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLI--------TPDGL 180 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~--------~p~gl 180 (395)
.|.++++.. .+.....+....+.++++++.++.+|+++..++.|..++.+... ....+...... .|.++
T Consensus 70 ~v~~~d~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 146 (353)
T 3vgz_A 70 VVYRLDPVT-LEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE--VKGRLVLDDRKRTEEVRPLQPREL 146 (353)
T ss_dssp EEEEECTTT-CCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCC--EEEEEESCCCCCCSSCCCCEEEEE
T ss_pred cEEEEcCCC-CeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCe--eEEEEecCCCccccccCCCCCceE
Confidence 478888766 44444444456689999999999999999888999999987652 22333332222 27899
Q ss_pred EEecCCCeEEEEe-CCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEE
Q psy13629 181 AIDWLTEKLYWTD-SETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIV 259 (395)
Q Consensus 181 AVD~~~~~LYwtd-~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv 259 (395)
++++.++.+|+++ ...++|.+.++++......+......|.+++++|++++||+++. ...|...++.. ......+
T Consensus 147 ~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~i~~~d~~~--~~~~~~~ 222 (353)
T 3vgz_A 147 VADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA--DGELITIDTAD--NKILSRK 222 (353)
T ss_dssp EEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT--TSEEEEEETTT--TEEEEEE
T ss_pred EECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC--CCeEEEEECCC--CeEEEEE
Confidence 9999999999999 45788999999877766666335567999999999999999983 46788888865 2222222
Q ss_pred ec----CCcCceeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 260 DS----TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 260 ~~----~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
.. ....|.++++++++++||+++...+.|..++......
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 22 2346888999999999999998889999999855443
No 92
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.28 E-value=4.9e-10 Score=108.98 Aligned_cols=179 Identities=13% Similarity=0.045 Sum_probs=119.4
Q ss_pred EEEEeeCCCC-CccE-EecCC------CCCeEEEEEEcC---CCEEEEEECC--CCeE--EEEEccCCCCCceEEEEeCC
Q psy13629 109 DIRIANLSRP-LKPV-TIIKD------LEEGAAIDYYYK---KSMVCWTDHG--TEMI--SCCTFDGNNVGSKHNVITNG 173 (395)
Q Consensus 109 ~I~~~~l~~~-~~~~-~~~~~------~~~~~gl~~d~~---~~~lywsd~~--~~~I--~~~~~dg~~~~~~~~i~~~~ 173 (395)
.|.+++++.. .+.. +...+ .-+|.||++... ..+||+.|.. ..+| ++++.++........+-...
T Consensus 84 ~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~ 163 (355)
T 3sre_A 84 KILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL 163 (355)
T ss_dssp EEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTT
T ss_pred eEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCC
Confidence 3777887631 2222 22222 238999999763 3479999876 3454 44555443111111222246
Q ss_pred CCCcceEEEecCCCeEEEEeC-----------------CCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEe
Q psy13629 174 LITPDGLAIDWLTEKLYWTDS-----------------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTD 236 (395)
Q Consensus 174 ~~~p~glAVD~~~~~LYwtd~-----------------~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd 236 (395)
+.+|+++++|. .+.+|+++. ..++|++++.. ..+++. .++..|+||+++|+++.||++|
T Consensus 164 ~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~-~~l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 164 LPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVA-EGFDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp CSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEE-EEESSEEEEEECTTSSEEEEEE
T ss_pred CCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEee-cCCcccCcceECCCCCEEEEEe
Confidence 78999999997 678887763 24678888873 344444 7789999999999999999999
Q ss_pred eCCCCeEEEEecC--CCCcceEEEEecCCcCceeEEEeccccEEEEec-cceeeeeeeccc
Q psy13629 237 WGEVPKIERGAMN--GDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWID-GRLTFIEVMDYD 294 (395)
Q Consensus 237 ~~~~~~I~~~~~d--G~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD-~~~~~I~~~~~d 294 (395)
.. ..+|.+.+++ |..++++++ .. -..|.||++|..+++||++. ++..+|.+.+.+
T Consensus 240 t~-~~~I~~~~~~~~g~l~~~~~~-~~-~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 240 LL-AHKIHVYEKHANWTLTPLRVL-SF-DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp GG-GTEEEEEEECTTSCEEEEEEE-EC-SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CC-CCeEEEEEECCCCcEecCEEE-eC-CCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 54 6889999986 433344444 32 46899999995457899965 566677766666
No 93
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.26 E-value=2.6e-10 Score=108.09 Aligned_cols=154 Identities=16% Similarity=0.003 Sum_probs=113.6
Q ss_pred CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCC--CeEEEEECCC
Q psy13629 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET--NKLEVSSLDG 206 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~--~~I~v~~ldg 206 (395)
..+.++++|+. +.|||+|..+++|++++.++. ...... ....|.||++|.. ++||++|... .+|.+++...
T Consensus 32 ~~pegia~~~~-g~lyv~d~~~~~I~~~d~~g~----~~~~~~-~~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPD-GTIFVTNHEVGEIVSITPDGN----QQIHAT-VEGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTT-SCEEEEETTTTEEEEECTTCC----EEEEEE-CSSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCC-CCEEEEeCCCCeEEEECCCCc----eEEEEe-CCCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCC
Confidence 57899999985 459999999999999999874 222222 2357999999974 6699999654 3588887655
Q ss_pred CceEEEEe-cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEE-E---------ecCCcCceeEEEeccc
Q psy13629 207 KKRKVLYW-EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVI-V---------DSTIFWPNGIAIDFNN 275 (395)
Q Consensus 207 ~~~~~l~~-~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~l-v---------~~~~~~P~glalD~~~ 275 (395)
...+.+.. .....|.++++.+ .+.+|++|.. ..+|++++.++ ...++. . ...+..|+|| +.++
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~-~g~i~~~d~~~--~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPLS-DTQYLTADSY-RGAIWLIDVVQ--PSGSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEESS-SSEEEEEETT-TTEEEEEETTT--TEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred CeEEEEEeCCCccccCcccccC-CCcEEEEECC-CCeEEEEeCCC--CcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 44444443 3456789999864 6789999954 57899999875 222222 1 1245689998 5558
Q ss_pred cEEEEeccceeeeeeecccc
Q psy13629 276 RLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 276 ~rLYwaD~~~~~I~~~~~dG 295 (395)
++|||+|...++|.++++++
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCT
T ss_pred CEEEEEeCCCCEEEEEEeCC
Confidence 89999999999999999885
No 94
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.25 E-value=8.4e-10 Score=104.75 Aligned_cols=163 Identities=11% Similarity=0.089 Sum_probs=122.9
Q ss_pred EecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCC----Ce
Q psy13629 123 TIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET----NK 198 (395)
Q Consensus 123 ~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~----~~ 198 (395)
.+......+.+++|++.+ +|||++...+.|++++.++. ....+.......|.+|++|+ .++||+++... +.
T Consensus 39 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETK---EIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp EEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTC---CEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCE
T ss_pred EEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCC---cEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCce
Confidence 344455678999999765 49999988899999998865 33334434456799999997 56899998765 68
Q ss_pred EEEEECCCCceEEEEe--cCCCCceeEEEeCCCCeEEEEeeCC-----CCeEEEEecCCCCcceEEEEecCCcCceeEEE
Q psy13629 199 LEVSSLDGKKRKVLYW--EDIDQPRAIALVPQDSIMFWTDWGE-----VPKIERGAMNGDPRHRKVIVDSTIFWPNGIAI 271 (395)
Q Consensus 199 I~v~~ldg~~~~~l~~--~~~~~P~~iavdp~~g~LYwtd~~~-----~~~I~~~~~dG~~~~~~~lv~~~~~~P~glal 271 (395)
|.++++++.....++. .....|+++++|| +|.+|+++... ...|++++.++ ...+.+. .....|+++++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~--~~~~~~~-~~~~~~~~i~~ 189 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDF--RTVTPII-QNISVANGIAL 189 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTS--CCEEEEE-EEESSEEEEEE
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCC--CEEEEee-cCCCcccceEE
Confidence 9999999887765543 2346799999998 56899988531 36799998876 3333332 34457999999
Q ss_pred eccccEEEEeccceeeeeeeccc
Q psy13629 272 DFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 272 D~~~~rLYwaD~~~~~I~~~~~d 294 (395)
+.+++.||+++...+.|.+.+++
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCCCCEEEEEeCCCCeEEEEEec
Confidence 98888899999888899998884
No 95
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.24 E-value=1.4e-09 Score=101.56 Aligned_cols=178 Identities=14% Similarity=0.035 Sum_probs=127.2
Q ss_pred EEEEEeeCCCCCccEEe--cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC
Q psy13629 108 LDIRIANLSRPLKPVTI--IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~--~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~ 185 (395)
+.|+++|+.. .+.... .+....+.|++++ +++||++++.++.+.+++.+... ...++.. + .|.|..+.+.
T Consensus 44 s~v~~iD~~t-g~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~--v~~~i~~-g--~~~g~glt~D 115 (266)
T 2iwa_A 44 SSVRQVALQT-GKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS--NIKNFTH-Q--MKDGWGLATD 115 (266)
T ss_dssp CEEEEEETTT-CCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE--EEEEEEC-C--SSSCCEEEEC
T ss_pred CEEEEEECCC-CCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc--EEEEEEC-C--CCCeEEEEEC
Confidence 4688899876 343333 3344455677776 67999999999999999988542 2223322 2 4667777777
Q ss_pred CCeEEEEeCCCCeEEEEECCCCceEEEEec-----CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe
Q psy13629 186 TEKLYWTDSETNKLEVSSLDGKKRKVLYWE-----DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD 260 (395)
Q Consensus 186 ~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~-----~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~ 260 (395)
++.||.++ +.++|.+.|..+.....-+.- ....|+++... +|+||.+.|. ...|.+++........++-+.
T Consensus 116 g~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~-~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 116 GKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQ-TDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp SSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT-SSEEEEEETTTCCEEEEEECH
T ss_pred CCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCC-CCeEEEEECCCCcEEEEEECC
Confidence 89999999 588999999988654433321 23468899887 6799999977 679999999752222223232
Q ss_pred c-----------CCcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 261 S-----------TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 261 ~-----------~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
. ....||||++|..+++||++....++++.+++....
T Consensus 192 g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 192 NLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp HHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred CcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 1 113689999999999999999999999999876543
No 96
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.24 E-value=1e-08 Score=97.17 Aligned_cols=182 Identities=13% Similarity=0.006 Sum_probs=131.8
Q ss_pred EEEEeeCCCCCccEEecC-CCC--------CeEEEEEEcCCCEEEEEEC-CCCeEEEEEccCCCCCceEEEEeCCCCCcc
Q psy13629 109 DIRIANLSRPLKPVTIIK-DLE--------EGAAIDYYYKKSMVCWTDH-GTEMISCCTFDGNNVGSKHNVITNGLITPD 178 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~-~~~--------~~~gl~~d~~~~~lywsd~-~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~ 178 (395)
.|.++++........+.. ... .+.++++++.++.+|+++. .++.|+.++.+.. .....+......|.
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~ 188 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI---KLKTAIQNTGKMST 188 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT---EEEEEECCCCTTCC
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC---ceEEEecCCCCccc
Confidence 678888866332222222 111 2789999999999999984 4778999998864 22233332345699
Q ss_pred eEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEec----CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcc
Q psy13629 179 GLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE----DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRH 254 (395)
Q Consensus 179 glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~----~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~ 254 (395)
++++++.++.||+++. .+.|.+.++........+.. ....|.+++++|.+++||+++.. ...|...+.+. ..
T Consensus 189 ~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~v~~~d~~~--~~ 264 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-AAEVLVVDTRN--GN 264 (353)
T ss_dssp CCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-SSEEEEEETTT--CC
T ss_pred eEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-CCEEEEEECCC--Cc
Confidence 9999999999999986 68999999987665544433 24467889999999999999844 67899999865 22
Q ss_pred eEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceee
Q psy13629 255 RKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRL 299 (395)
Q Consensus 255 ~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~ 299 (395)
....+. ...|.+++++.++++||+++...+.|..++.+.....
T Consensus 265 ~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 265 ILAKVA--APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp EEEEEE--CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEE--cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 222222 3458899999999999999988899999998654433
No 97
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.22 E-value=4.5e-09 Score=99.14 Aligned_cols=183 Identities=10% Similarity=-0.060 Sum_probs=130.0
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcce-EEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDG-LAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~g-lAVD~~~~ 187 (395)
.|.++++........+......+ +++|+++++.||+++...+.|++++++... ...........|.. +++++.++
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~s~dg~ 96 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP---PKVVAIQEGQSSMADVDITPDDQ 96 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS---CEEEEEEECSSCCCCEEECTTSS
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc---eeEEecccCCCCccceEECCCCC
Confidence 78888887633333333345556 999999999999999888999999998653 21222223456777 99999888
Q ss_pred eEEEEeCCCC--eEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcce---EEEEecC
Q psy13629 188 KLYWTDSETN--KLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHR---KVIVDST 262 (395)
Q Consensus 188 ~LYwtd~~~~--~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~---~~lv~~~ 262 (395)
.||.++...+ .|.+.+++.......+ .....|++++++|++++||+++......|...+++...... ...+ ..
T Consensus 97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~ 174 (331)
T 3u4y_A 97 FAVTVTGLNHPFNMQSYSFLKNKFISTI-PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SG 174 (331)
T ss_dssp EEEECCCSSSSCEEEEEETTTTEEEEEE-ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CS
T ss_pred EEEEecCCCCcccEEEEECCCCCeEEEE-ECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cC
Confidence 9994433334 9999999877665555 45677999999999989999996633326666655311211 1111 22
Q ss_pred CcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 263 IFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 263 ~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
...|.++++++++++||+++...+.|...+++...
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 34699999999988999999888999998876443
No 98
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.20 E-value=5.4e-10 Score=108.64 Aligned_cols=185 Identities=16% Similarity=0.123 Sum_probs=124.7
Q ss_pred EEEEeeCCCCCccE----EecCCCCCeEEEEEEcC---CCEEEEEECCC-----CeEEEEEccCCCCCceEEEEe-----
Q psy13629 109 DIRIANLSRPLKPV----TIIKDLEEGAAIDYYYK---KSMVCWTDHGT-----EMISCCTFDGNNVGSKHNVIT----- 171 (395)
Q Consensus 109 ~I~~~~l~~~~~~~----~~~~~~~~~~gl~~d~~---~~~lywsd~~~-----~~I~~~~~dg~~~~~~~~i~~----- 171 (395)
.|++++ ++..... ........+.||+++++ ++.||+++... ++|.|+..++..+...++++.
T Consensus 52 ~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~ 130 (352)
T 2ism_A 52 RIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPAR 130 (352)
T ss_dssp EEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred eEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCC
Confidence 567776 4421111 11234678999999998 78999998654 789999998643222333332
Q ss_pred -CCCCCcceEEEecCCCeEEEEeCC-------------CCeEEEEECCCCc------------eEEEEecCCCCceeEEE
Q psy13629 172 -NGLITPDGLAIDWLTEKLYWTDSE-------------TNKLEVSSLDGKK------------RKVLYWEDIDQPRAIAL 225 (395)
Q Consensus 172 -~~~~~p~glAVD~~~~~LYwtd~~-------------~~~I~v~~ldg~~------------~~~l~~~~~~~P~~iav 225 (395)
.....|.+|++++ .++||+++.. .++|.+++.+|+. ...+....+.+|++|++
T Consensus 131 ~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~ 209 (352)
T 2ism_A 131 PHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAW 209 (352)
T ss_dssp TTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEE
T ss_pred CCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEE
Confidence 2345789999998 5699999742 3689999999831 22334467899999999
Q ss_pred eCCCCeEEEEeeCCCC-------eEEEEecCCCC-------------cceEEEEecCCcCceeEEEeccccEEEEeccce
Q psy13629 226 VPQDSIMFWTDWGEVP-------KIERGAMNGDP-------------RHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRL 285 (395)
Q Consensus 226 dp~~g~LYwtd~~~~~-------~I~~~~~dG~~-------------~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~ 285 (395)
||..|.||++|.+... .|.++...+.- .......-.....|.||++. ++.||+++...
T Consensus 210 d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~--~G~l~v~~~~~ 287 (352)
T 2ism_A 210 HPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF--RGDLYVAGLRG 287 (352)
T ss_dssp CTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE--TTEEEEEETTT
T ss_pred ECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEE--CCEEEEEECCC
Confidence 9989999999976332 46665432200 00111111222368999993 78999999999
Q ss_pred eeeeeeccccce
Q psy13629 286 TFIEVMDYDGYV 297 (395)
Q Consensus 286 ~~I~~~~~dG~~ 297 (395)
++|.++++++..
T Consensus 288 ~~v~~v~~~~~~ 299 (352)
T 2ism_A 288 QALLRLVLEGER 299 (352)
T ss_dssp TEEEEEEEEEET
T ss_pred CEEEEEEECCCC
Confidence 999999987654
No 99
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.19 E-value=5.5e-09 Score=99.65 Aligned_cols=163 Identities=9% Similarity=0.079 Sum_probs=114.3
Q ss_pred CeEEEEEEcCCCEEEEEECCCCeEEEEEccC-CCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCC--
Q psy13629 130 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDG-NNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG-- 206 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg-~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg-- 206 (395)
.+.+++|++.++ +|+++...+.|..++++. ..+.....+.......|.++++++.++.||+++...+.|.+++++.
T Consensus 142 ~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 142 HIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp CEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 478899999988 999999899999999883 2111111222333457999999998888999998889999998874
Q ss_pred CceEE--EEecC------CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceE-EEEecCCcCceeEEEeccccE
Q psy13629 207 KKRKV--LYWED------IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRK-VIVDSTIFWPNGIAIDFNNRL 277 (395)
Q Consensus 207 ~~~~~--l~~~~------~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~-~lv~~~~~~P~glalD~~~~r 277 (395)
..... .+... ...|.+++++|+.++||+++.+ ...|...+++....... ..+......|.++++++++++
T Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~-~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~ 299 (347)
T 3hfq_A 221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG-YNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAF 299 (347)
T ss_dssp TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET-TTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSE
T ss_pred CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC-CCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCE
Confidence 22211 11111 1458999999999999999855 56777777763101111 122223457999999999999
Q ss_pred EEEeccceeeeeeeccc
Q psy13629 278 LYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 278 LYwaD~~~~~I~~~~~d 294 (395)
||+++...+.|...+.|
T Consensus 300 l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 300 VVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEEcCCCcEEEEEEe
Confidence 99999877777666443
No 100
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.17 E-value=3.1e-10 Score=110.48 Aligned_cols=165 Identities=12% Similarity=0.058 Sum_probs=117.4
Q ss_pred CccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCC---ceEEEEeCCCCCcceEEEecC---CCeEEEE
Q psy13629 119 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG---SKHNVITNGLITPDGLAIDWL---TEKLYWT 192 (395)
Q Consensus 119 ~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~---~~~~i~~~~~~~p~glAVD~~---~~~LYwt 192 (395)
.+.+.++..+..|.+|+++++++.||+++. .++|++++.+|.... ....+...+...+.|||+++. ++.||++
T Consensus 8 ~~~~~va~~l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 8 VNVEVLQDKLDHPWALAFLPDNHGMLITLR-GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SEEEEEEEEESSEEEEEECSTTCCEEEEET-TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred cEEEEEECCCCCcEEEEEcCCCCEEEEEeC-CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 456667778899999999997765999995 589999987663100 000111223456899999986 8999999
Q ss_pred eCC-------CCeEEEEECCCC-----ceEEEEec------CCCCceeEEEeCCCCeEEEEeeCC------------CCe
Q psy13629 193 DSE-------TNKLEVSSLDGK-----KRKVLYWE------DIDQPRAIALVPQDSIMFWTDWGE------------VPK 242 (395)
Q Consensus 193 d~~-------~~~I~v~~ldg~-----~~~~l~~~------~~~~P~~iavdp~~g~LYwtd~~~------------~~~ 242 (395)
+.. ..+|.++++++. ..++++.. ..+.+.+|+++| .|+||++.... ..+
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~ 165 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGK 165 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTE
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeE
Confidence 854 458999988754 34455432 245689999999 56999997221 258
Q ss_pred EEEEecCCCCc----------ceEEEEecCCcCceeEEEeccccEEEEeccce
Q psy13629 243 IERGAMNGDPR----------HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRL 285 (395)
Q Consensus 243 I~~~~~dG~~~----------~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~ 285 (395)
|.|++.||..- ....++...+..|.||++|..+++||++|...
T Consensus 166 I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 166 LVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp EEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS
T ss_pred EEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC
Confidence 99999998310 12334556678899999998789999999764
No 101
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.17 E-value=3.3e-09 Score=100.54 Aligned_cols=182 Identities=19% Similarity=0.148 Sum_probs=127.5
Q ss_pred EEEEeeCCCCCccEEe-cCCCCCeEEEEEEcCCCEEEEEECCC----CeEEEEEccCCCCCceEEEEe--CCCCCcceEE
Q psy13629 109 DIRIANLSRPLKPVTI-IKDLEEGAAIDYYYKKSMVCWTDHGT----EMISCCTFDGNNVGSKHNVIT--NGLITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~-~~~~~~~~gl~~d~~~~~lywsd~~~----~~I~~~~~dg~~~~~~~~i~~--~~~~~p~glA 181 (395)
.|.+++.++ .....+ ......+.++++++.+ ++|+++... +.|++++.++.. ...++. .....|.+++
T Consensus 67 ~i~~~d~~~-~~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~i~ 141 (333)
T 2dg1_A 67 NIFKINPET-KEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDN---LQDIIEDLSTAYCIDDMV 141 (333)
T ss_dssp EEEEECTTT-CCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCS---CEEEECSSSSCCCEEEEE
T ss_pred EEEEEeCCC-CcEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCE---EEEEEccCccCCcccceE
Confidence 678888776 333333 2455779999999875 578887655 689999988752 232332 2335799999
Q ss_pred EecCCCeEEEEeCC------CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcce
Q psy13629 182 IDWLTEKLYWTDSE------TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHR 255 (395)
Q Consensus 182 VD~~~~~LYwtd~~------~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~ 255 (395)
+|+ .+++|+++.. ...|.+++.++.....+. .....|++++++|+++.||+++.. ...|.+.+++......
T Consensus 142 ~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~-~~~i~~~d~~~~g~~~ 218 (333)
T 2dg1_A 142 FDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETT-ANRLHRIALEDDGVTI 218 (333)
T ss_dssp ECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGG-GTEEEEEEECTTSSSE
T ss_pred ECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCC-CCeEEEEEecCCCcCc
Confidence 998 6789999864 468999998876555544 445679999999988889999844 5689999984210222
Q ss_pred E-----EEEe-cCCcCceeEEEeccccEEEEeccceeeeeeeccccceee
Q psy13629 256 K-----VIVD-STIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRL 299 (395)
Q Consensus 256 ~-----~lv~-~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~ 299 (395)
. .... .....|.+|++|. +++||+++...+.|.+.+.+|....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~g~~~~ 267 (333)
T 2dg1_A 219 QPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAMYGQGRVLVFNKRGYPIG 267 (333)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEBT-TCCEEEEEETTTEEEEECTTSCEEE
T ss_pred ccccceEEEecCCCCCCCceEECC-CCCEEEEEcCCCEEEEECCCCCEEE
Confidence 1 1211 1124799999995 4679999877788999988775433
No 102
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.17 E-value=8.4e-09 Score=97.27 Aligned_cols=180 Identities=13% Similarity=0.067 Sum_probs=130.7
Q ss_pred EEEEeeCCCCCcc-EEecCCCCCeEE-EEEEcCCCEEEEEECCCC--eEEEEEccCCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRPLKP-VTIIKDLEEGAA-IDYYYKKSMVCWTDHGTE--MISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~-~~~~~~~~~~~g-l~~d~~~~~lywsd~~~~--~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|.++++.. ... .........+.. +++++.++.||.++...+ .|..++++.. .....+ .....|.++++++
T Consensus 63 ~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~---~~~~~~-~~~~~~~~~~~sp 137 (331)
T 3u4y_A 63 TLVQIETQL-EPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN---KFISTI-PIPYDAVGIAISP 137 (331)
T ss_dssp EEEEEECSS-SSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT---EEEEEE-ECCTTEEEEEECT
T ss_pred eEEEEECCC-CceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC---CeEEEE-ECCCCccceEECC
Confidence 678888876 333 444444556677 999999999995443334 8999999865 222222 2345789999999
Q ss_pred CCCeEEEEeCCCCe-EEEEECCCCceE-----EEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcc---e
Q psy13629 185 LTEKLYWTDSETNK-LEVSSLDGKKRK-----VLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRH---R 255 (395)
Q Consensus 185 ~~~~LYwtd~~~~~-I~v~~ldg~~~~-----~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~---~ 255 (395)
.++.||+++...+. |.+++++..... ..+ .....|++++++|++++||+++.. ...|...+++.. .. .
T Consensus 138 dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~d~~~~-~~~~~~ 214 (331)
T 3u4y_A 138 NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLI-GNSIGILETQNP-ENITLL 214 (331)
T ss_dssp TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETT-TTEEEEEECSST-TSCEEE
T ss_pred CCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCC-CCeEEEEECCCC-ccccee
Confidence 88889999988777 888887754332 222 445679999999999899999854 678999998752 22 2
Q ss_pred EEEEecCCcCceeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 256 KVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 256 ~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
..+ . .-..|.+++++++++.||+++...+.|..+++.....
T Consensus 215 ~~~-~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 215 NAV-G-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EEE-E-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred eec-c-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 222 2 2357999999999999999999889999998865443
No 103
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=1.2e-09 Score=105.18 Aligned_cols=172 Identities=10% Similarity=0.080 Sum_probs=119.0
Q ss_pred EEEEeeCCCCCccE-EecC-----CCCCeEEEEEEcCCCEEEEEEC---CCCeEEEEEccCCCCCceEEEEeC-------
Q psy13629 109 DIRIANLSRPLKPV-TIIK-----DLEEGAAIDYYYKKSMVCWTDH---GTEMISCCTFDGNNVGSKHNVITN------- 172 (395)
Q Consensus 109 ~I~~~~l~~~~~~~-~~~~-----~~~~~~gl~~d~~~~~lywsd~---~~~~I~~~~~dg~~~~~~~~i~~~------- 172 (395)
.|.+++++...... ...+ ....+.++++|+.++.+|++|. ..+.|.+++++... ...+...
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~---~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL---AARVLQGYPGIAPE 170 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC---EEEECTTCTTTSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC---EEEEecCCCccccc
Confidence 56677776422121 1121 1235689999998899999998 67899999987432 1111110
Q ss_pred ----------------------CCCCcceEEEecCCCeEEEEeCCCCeEEEEECC----CCc--e-----EEEEecCCCC
Q psy13629 173 ----------------------GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD----GKK--R-----KVLYWEDIDQ 219 (395)
Q Consensus 173 ----------------------~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ld----g~~--~-----~~l~~~~~~~ 219 (395)
....|+|||+++.++.||+++....+|++++.+ +.. . .... .....
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~ 249 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPI 249 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCS
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCC
Confidence 013579999999888999999888899998853 110 0 0111 22347
Q ss_pred ceeEEEeCCCCeEEEEeeCCCCeEEEEec-CCCCcceEEEEec-CCcCceeEEEeccccEEEEeccceeeeee
Q psy13629 220 PRAIALVPQDSIMFWTDWGEVPKIERGAM-NGDPRHRKVIVDS-TIFWPNGIAIDFNNRLLYWIDGRLTFIEV 290 (395)
Q Consensus 220 P~~iavdp~~g~LYwtd~~~~~~I~~~~~-dG~~~~~~~lv~~-~~~~P~glalD~~~~rLYwaD~~~~~I~~ 290 (395)
|.|+++|+. |.||++++. ..+|.+.+. +| . ...++.. .+.+|.+++++. +++||+++...+++..
T Consensus 250 pdgia~d~~-G~l~va~~~-~~~V~~~d~~~G--~-~~~~~~~~~~~~p~~va~~~-~g~l~v~~~~~~~~~~ 316 (343)
T 2qe8_A 250 CDGISIDKD-HNIYVGDLA-HSAIGVITSADR--A-YKLLVTDEKLSWTDSFNFGS-DGYLYFDCNQLHHSAP 316 (343)
T ss_dssp CSCEEECTT-CCEEEEEGG-GTEEEEEETTTT--E-EEEEEECGGGSCEEEEEECT-TSCEEEEECCGGGSGG
T ss_pred CceEEECCC-CCEEEEccC-CCeEEEEECCCC--C-EEEEEECCceecCCeeEECC-CCcEEEEeCccccccc
Confidence 999999985 899999977 678999999 77 3 3444443 477999999995 4789999987666543
No 104
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.16 E-value=8.8e-09 Score=96.11 Aligned_cols=160 Identities=12% Similarity=0.001 Sum_probs=120.8
Q ss_pred CeEEEEEEcCCCEEEEEEC--CCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCC
Q psy13629 130 EGAAIDYYYKKSMVCWTDH--GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 207 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~--~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~ 207 (395)
.+.||+|+++ +.||.+.. ..+.|.++++.... ....+.......++|++++ +++||+++...+.+.++|.+..
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~--v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGK--VENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCC--EEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTT
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCC--EEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCC
Confidence 4689999976 69999975 36899999998653 2233444444567788887 6899999999999999999865
Q ss_pred ceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec---CCcCceeEEEeccccEEEEeccc
Q psy13629 208 KRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS---TIFWPNGIAIDFNNRLLYWIDGR 284 (395)
Q Consensus 208 ~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~---~~~~P~glalD~~~~rLYwaD~~ 284 (395)
....-+... .|.|..+.++.++||.++ + ..+|..++.+.....+++.+.. .+..||+|.+. +++||.+.+.
T Consensus 97 ~v~~~i~~g--~~~g~glt~Dg~~l~vs~-g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~ 170 (266)
T 2iwa_A 97 SNIKNFTHQ--MKDGWGLATDGKILYGSD-G-TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQ 170 (266)
T ss_dssp EEEEEEECC--SSSCCEEEECSSSEEEEC-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT
T ss_pred cEEEEEECC--CCCeEEEEECCCEEEEEC-C-CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCC
Confidence 544444333 567777888899999999 6 6799999998743445555553 24468999887 5799999999
Q ss_pred eeeeeeeccccceeee
Q psy13629 285 LTFIEVMDYDGYVRLV 300 (395)
Q Consensus 285 ~~~I~~~~~dG~~~~~ 300 (395)
.+.|.++|........
T Consensus 171 ~~~V~vID~~tg~V~~ 186 (266)
T 2iwa_A 171 TDCIARISAKDGTLLG 186 (266)
T ss_dssp SSEEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEEE
Confidence 9999999986655443
No 105
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.15 E-value=2.4e-09 Score=100.26 Aligned_cols=178 Identities=17% Similarity=0.103 Sum_probs=123.6
Q ss_pred EEEEeeCCCCCccEEecC-----CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEE-EeC----CCCCcc
Q psy13629 109 DIRIANLSRPLKPVTIIK-----DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV-ITN----GLITPD 178 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~-----~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i-~~~----~~~~p~ 178 (395)
.|.+++... .+...+.. ....+.++++++.+++||+++.. +.|.+++.+|. ...+ ... ....|.
T Consensus 47 ~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-~~l~~~d~~g~----~~~~~~~~~~~~~~~~~~ 120 (314)
T 1pjx_A 47 EILRIDLKT-GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-LGLLVVQTDGT----FEEIAKKDSEGRRMQGCN 120 (314)
T ss_dssp EEEEECTTT-CCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-TEEEEEETTSC----EEECCSBCTTSCBCBCCC
T ss_pred EEEEEeCCC-CcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-CCEEEEeCCCC----EEEEEeccCCCccccCCc
Confidence 567777654 33333322 23678999999876789999854 48999998842 2322 211 224699
Q ss_pred eEEEecCCCeEEEEeCCC---------------CeEEEEECCCCceEEEEecCCCCceeEEEe----CCCCeEEEEeeCC
Q psy13629 179 GLAIDWLTEKLYWTDSET---------------NKLEVSSLDGKKRKVLYWEDIDQPRAIALV----PQDSIMFWTDWGE 239 (395)
Q Consensus 179 glAVD~~~~~LYwtd~~~---------------~~I~v~~ldg~~~~~l~~~~~~~P~~iavd----p~~g~LYwtd~~~ 239 (395)
+|++|+ .++||+++... +.|.+++.+|+.. .+. .....|++++++ ++++.||+++..
T Consensus 121 ~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~-~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~- 196 (314)
T 1pjx_A 121 DCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMI-QVD-TAFQFPNGIAVRHMNDGRPYQLIVAETP- 196 (314)
T ss_dssp EEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEE-EEE-EEESSEEEEEEEECTTSCEEEEEEEETT-
T ss_pred CEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCCEE-Eec-cCCCCcceEEEecccCCCCCEEEEEECC-
Confidence 999998 67899999754 6899999885543 333 456779999999 987799999944
Q ss_pred CCeEEEEecC--CCCcceEEEEec--CC-cCceeEEEeccccEEEEeccceeeeeeeccc-cce
Q psy13629 240 VPKIERGAMN--GDPRHRKVIVDS--TI-FWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD-GYV 297 (395)
Q Consensus 240 ~~~I~~~~~d--G~~~~~~~lv~~--~~-~~P~glalD~~~~rLYwaD~~~~~I~~~~~d-G~~ 297 (395)
..+|.+.+.+ |.....+.+... .. ..|.+|++|. +++||+++...+.|.+++.+ |..
T Consensus 197 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 197 TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQP 259 (314)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSC
T ss_pred CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcE
Confidence 6789998876 311122233221 12 5799999995 56899999878899999987 543
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.12 E-value=3.6e-08 Score=95.14 Aligned_cols=180 Identities=15% Similarity=0.093 Sum_probs=138.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|+++++.. .+..........+.+++|++.++.||++...++.|..+++... .....+.. ...+.++++++.++.
T Consensus 13 ~v~v~d~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~---~~~~~~~~-~~~v~~~~~spdg~~ 87 (391)
T 1l0q_A 13 NISVIDVTS-NKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN---NVIATVPA-GSSPQGVAVSPDGKQ 87 (391)
T ss_dssp EEEEEETTT-TEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT---EEEEEEEC-SSSEEEEEECTTSSE
T ss_pred EEEEEECCC-CeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCC---eEEEEEEC-CCCccceEECCCCCE
Confidence 578888876 4444455566679999999999999999988899999998764 22222222 338999999999999
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
||++....+.|.+.++.+......+ .....+.+++++|.+++||++. .....|...++.. ......+.. -..|.+
T Consensus 88 l~~~~~~~~~v~v~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~-~~~~~v~~~d~~~--~~~~~~~~~-~~~~~~ 162 (391)
T 1l0q_A 88 VYVTNMASSTLSVIDTTSNTVAGTV-KTGKSPLGLALSPDGKKLYVTN-NGDKTVSVINTVT--KAVINTVSV-GRSPKG 162 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEE-ECSSSEEEEEECTTSSEEEEEE-TTTTEEEEEETTT--TEEEEEEEC-CSSEEE
T ss_pred EEEEECCCCEEEEEECCCCeEEEEE-eCCCCcceEEECCCCCEEEEEe-CCCCEEEEEECCC--CcEEEEEec-CCCcce
Confidence 9999988899999999987666555 3456799999999999999988 4467899999875 222222222 346899
Q ss_pred EEEeccccEEEEeccceeeeeeecccccee
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
+++++.+++||++....+.|...++.....
T Consensus 163 ~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 163 IAVTPDGTKVYVANFDSMSISVIDTVTNSV 192 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCeE
Confidence 999988999999988888888888765443
No 107
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.11 E-value=5.3e-09 Score=101.75 Aligned_cols=184 Identities=15% Similarity=0.124 Sum_probs=124.8
Q ss_pred EEEEeeCCCCCccEE----ecCCCCCeEEEEEEcC---CCEEEEEECC---C----CeEEEEEccCC--CCCceEEEEe-
Q psy13629 109 DIRIANLSRPLKPVT----IIKDLEEGAAIDYYYK---KSMVCWTDHG---T----EMISCCTFDGN--NVGSKHNVIT- 171 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~----~~~~~~~~~gl~~d~~---~~~lywsd~~---~----~~I~~~~~dg~--~~~~~~~i~~- 171 (395)
.|++++.++. .... .......+.||++++. ++.||+++.. . ++|.|+..++. .+...++++.
T Consensus 50 ~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~ 128 (354)
T 3a9g_A 50 RLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDG 128 (354)
T ss_dssp EEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred EEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEc
Confidence 5677765442 1111 1234577999999998 8899999853 3 68999998864 1212233322
Q ss_pred ---CCCCCcceEEEecCCCeEEEEeCC-------------CCeEEEEECCCC--------ceEEEEecCCCCceeEEEeC
Q psy13629 172 ---NGLITPDGLAIDWLTEKLYWTDSE-------------TNKLEVSSLDGK--------KRKVLYWEDIDQPRAIALVP 227 (395)
Q Consensus 172 ---~~~~~p~glAVD~~~~~LYwtd~~-------------~~~I~v~~ldg~--------~~~~l~~~~~~~P~~iavdp 227 (395)
.....+.+|++++ .++||+++.. .++|.+++.+|+ ..+ +....+.+|.||++||
T Consensus 129 ~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~-i~a~G~rnp~Gla~d~ 206 (354)
T 3a9g_A 129 IPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSP-IWSYGHRNPQGIDWHR 206 (354)
T ss_dssp EECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCC-EEEECCSCCCEEEECT
T ss_pred CCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCc-EEEEccCCcceEEEeC
Confidence 2345789999998 6789999742 368999999997 333 4447899999999999
Q ss_pred CCCeEEEEeeCC--CCeEEEEecCCCC-------------cceEEEEe-cCCcCceeEEE-------eccccEEEEeccc
Q psy13629 228 QDSIMFWTDWGE--VPKIERGAMNGDP-------------RHRKVIVD-STIFWPNGIAI-------DFNNRLLYWIDGR 284 (395)
Q Consensus 228 ~~g~LYwtd~~~--~~~I~~~~~dG~~-------------~~~~~lv~-~~~~~P~glal-------D~~~~rLYwaD~~ 284 (395)
..|.||++|.+. ...|.++...+.- .......- .....|.||++ + .+++||+++..
T Consensus 207 ~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~-~~G~l~v~~~~ 285 (354)
T 3a9g_A 207 ASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPG-LRGWLLIACLR 285 (354)
T ss_dssp TTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGG-GTTEEEEEETT
T ss_pred CCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcc-cCCcEEEEEcC
Confidence 899999999662 2345555432100 00111110 12236999999 4 56799999999
Q ss_pred eeeeeeeccccc
Q psy13629 285 LTFIEVMDYDGY 296 (395)
Q Consensus 285 ~~~I~~~~~dG~ 296 (395)
.++|.++++++.
T Consensus 286 ~~~v~~~~~~~~ 297 (354)
T 3a9g_A 286 GSMLAAVNFGDN 297 (354)
T ss_dssp TTEEEEEEECGG
T ss_pred CCEEEEEEECCC
Confidence 999999998864
No 108
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.10 E-value=1.5e-08 Score=97.99 Aligned_cols=188 Identities=11% Similarity=-0.016 Sum_probs=126.2
Q ss_pred EEEEeeCCCCCccEEec-----CCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEcc-CCCCCceEEEEeC-CCCCcceEE
Q psy13629 109 DIRIANLSRPLKPVTII-----KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD-GNNVGSKHNVITN-GLITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~-----~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~d-g~~~~~~~~i~~~-~~~~p~glA 181 (395)
.+.+++++......... +....+.+++|+++++.||.++...+.|..++++ ...+.....+... ....|.+++
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~ 199 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA 199 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence 35666665322222111 2456899999999999999999888999999997 3321111112111 246799999
Q ss_pred EecCCCeEEEEeCCCCeEEEEECC---CCceE--EEEec---CC---C-------CceeEE-EeCCCCeEEEEeeCCCC-
Q psy13629 182 IDWLTEKLYWTDSETNKLEVSSLD---GKKRK--VLYWE---DI---D-------QPRAIA-LVPQDSIMFWTDWGEVP- 241 (395)
Q Consensus 182 VD~~~~~LYwtd~~~~~I~v~~ld---g~~~~--~l~~~---~~---~-------~P~~ia-vdp~~g~LYwtd~~~~~- 241 (395)
+++.++.||.++...+.|.+++++ |+... ..+.. .. . .|.+++ ++|+.++||.++.+...
T Consensus 200 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~ 279 (365)
T 1jof_A 200 MHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFE 279 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTT
T ss_pred ECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCC
Confidence 999989999999888899998775 33221 11211 11 2 489999 99999999999865321
Q ss_pred ---eEEEEecCCCCcceEE--EEecCCcCceeEEEec---cccEEEEeccceeeeeeeccccc
Q psy13629 242 ---KIERGAMNGDPRHRKV--IVDSTIFWPNGIAIDF---NNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 242 ---~I~~~~~dG~~~~~~~--lv~~~~~~P~glalD~---~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
.|...+++....-..+ .+......|.++++++ ++++||+++...+.|...+.++.
T Consensus 280 ~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 280 LQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 7777777421122221 2333334699999998 78999999988888888887765
No 109
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.10 E-value=3.4e-08 Score=94.71 Aligned_cols=165 Identities=11% Similarity=0.040 Sum_probs=118.0
Q ss_pred CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCC-------CCce---EEEEeCCCCCcceEEEecCCCeEEEEeCCCCe
Q psy13629 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNN-------VGSK---HNVITNGLITPDGLAIDWLTEKLYWTDSETNK 198 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~-------~~~~---~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~ 198 (395)
..+.+++|++.++.||+++...+.|..++++... +... ..........|.++++++.++.||+++...+.
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence 3468899999999999999889999999887542 1100 23334455679999999988899999988899
Q ss_pred EEEEECCCCceEEEEe-----cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEE--EecCCcCceeEEE
Q psy13629 199 LEVSSLDGKKRKVLYW-----EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVI--VDSTIFWPNGIAI 271 (395)
Q Consensus 199 I~v~~ldg~~~~~l~~-----~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~l--v~~~~~~P~glal 271 (395)
|.++++++...+.+.. .....|.+++++|+.++||+++.+....|...+++......+.+ +.. -..|.++++
T Consensus 235 v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~ 313 (361)
T 3scy_A 235 VIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFII 313 (361)
T ss_dssp EEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEE
T ss_pred EEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEE
Confidence 9999987544332221 22456889999999999999985424567777665100121111 222 347999999
Q ss_pred eccccEEEEeccceeeeeeeccc
Q psy13629 272 DFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 272 D~~~~rLYwaD~~~~~I~~~~~d 294 (395)
++++++||+++...+.|.....|
T Consensus 314 spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 314 TPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEECCCCCEEEEEEE
Confidence 99999999999777777664333
No 110
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.10 E-value=5.3e-08 Score=90.28 Aligned_cols=167 Identities=12% Similarity=0.054 Sum_probs=124.6
Q ss_pred CCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCC
Q psy13629 128 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 207 (395)
Q Consensus 128 ~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~ 207 (395)
.+++.||+|++.++.||......+.|++++.+|. ....+...+...++|||++. ++.+|+++...+++.++.++..
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~---v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGD---LIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETTCC---EEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTT
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCC---EEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCC
Confidence 3679999999999999986657899999999965 44556567778999999995 6678888888899999987765
Q ss_pred ce-E--EEEecCC-CCc-----eeEEEeCCCCeEEEEeeCCCCeEEEEecCCCC--cceEEEEe------cCCcCceeEE
Q psy13629 208 KR-K--VLYWEDI-DQP-----RAIALVPQDSIMFWTDWGEVPKIERGAMNGDP--RHRKVIVD------STIFWPNGIA 270 (395)
Q Consensus 208 ~~-~--~l~~~~~-~~P-----~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~--~~~~~lv~------~~~~~P~gla 270 (395)
.. . ....-.+ ..| .|||+||.++.||.+.-.....|+..+ |-. ...+++-. ..+..+.+++
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhhccccccCCceeEE
Confidence 43 1 1111122 345 899999999999998744333788876 311 11233211 1345789999
Q ss_pred EeccccEEEEeccceeeeeeeccccceeee
Q psy13629 271 IDFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 271 lD~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
+|+..++||+.....+.+..++.+|..+..
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~~~~~ 209 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGEVIGE 209 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCCEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCCEEEE
Confidence 999999999999999999999999985544
No 111
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.10 E-value=2.3e-09 Score=100.35 Aligned_cols=163 Identities=15% Similarity=0.084 Sum_probs=119.0
Q ss_pred cEEecCCCCCeEEEEEEcCCCEEEEE-------ECCCCeEEEEEccCCCCCceEEEEeC----CCCCcceEEEecCCCeE
Q psy13629 121 PVTIIKDLEEGAAIDYYYKKSMVCWT-------DHGTEMISCCTFDGNNVGSKHNVITN----GLITPDGLAIDWLTEKL 189 (395)
Q Consensus 121 ~~~~~~~~~~~~gl~~d~~~~~lyws-------d~~~~~I~~~~~dg~~~~~~~~i~~~----~~~~p~glAVD~~~~~L 189 (395)
...+...+..+.+++||. ++.||++ +...+.|.+++.++. ....+... ....|.++++|+.+++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~~~~~g~l 85 (314)
T 1pjx_A 10 FTKVTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTG---KKTVICKPEVNGYGGIPAGCQCDRDANQL 85 (314)
T ss_dssp CEEEECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTC---CEEEEECCEETTEECCEEEEEECSSSSEE
T ss_pred HhhhhccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCC---cEEEEEecccCCCCCCCceEEEecCCCcE
Confidence 445677888999999995 5579999 767789999987654 22333221 23579999999865899
Q ss_pred EEEeCCCCeEEEEECCCCceEEE-Eec----CCCCceeEEEeCCCCeEEEEeeCC--------------CCeEEEEecCC
Q psy13629 190 YWTDSETNKLEVSSLDGKKRKVL-YWE----DIDQPRAIALVPQDSIMFWTDWGE--------------VPKIERGAMNG 250 (395)
Q Consensus 190 Ywtd~~~~~I~v~~ldg~~~~~l-~~~----~~~~P~~iavdp~~g~LYwtd~~~--------------~~~I~~~~~dG 250 (395)
|+++.. +.|.+++.+|+. ..+ ... ....|++|++|+ +|.||+++.+. ...|++.+.+|
T Consensus 86 ~v~~~~-~~l~~~d~~g~~-~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 162 (314)
T 1pjx_A 86 FVADMR-LGLLVVQTDGTF-EEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG 162 (314)
T ss_dssp EEEETT-TEEEEEETTSCE-EECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS
T ss_pred EEEECC-CCEEEEeCCCCE-EEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCC
Confidence 999974 489999998443 333 211 135699999998 56899998543 25799998876
Q ss_pred CCcceEEEEecCCcCceeEEEe----ccccEEEEeccceeeeeeeccc
Q psy13629 251 DPRHRKVIVDSTIFWPNGIAID----FNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 251 ~~~~~~~lv~~~~~~P~glalD----~~~~rLYwaD~~~~~I~~~~~d 294 (395)
.... + ......|++++++ .++++|||++...+.|.+.+++
T Consensus 163 --~~~~-~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 163 --QMIQ-V-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp --CEEE-E-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred --CEEE-e-ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 3322 2 2334579999999 8888999999888999988876
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.09 E-value=5.8e-08 Score=93.67 Aligned_cols=181 Identities=15% Similarity=0.116 Sum_probs=138.6
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|+++++.. .+..........+.+++|++.++.||++...++.|..++++.. .....+ .....+.++++++.++.
T Consensus 55 ~i~v~d~~~-~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~---~~~~~~-~~~~~~~~~~~s~dg~~ 129 (391)
T 1l0q_A 55 DVSIIDTAT-NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN---TVAGTV-KTGKSPLGLALSPDGKK 129 (391)
T ss_dssp EEEEEETTT-TEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEE-ECSSSEEEEEECTTSSE
T ss_pred eEEEEECCC-CeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCC---eEEEEE-eCCCCcceEEECCCCCE
Confidence 688888866 4444445555589999999999999999988899999999875 222222 23457899999998889
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
||++....+.|.+.++........+ .....|.+++++|.+++||++. .....|...++.. ......+. ....|.+
T Consensus 130 l~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~dg~~l~~~~-~~~~~v~~~d~~~--~~~~~~~~-~~~~~~~ 204 (391)
T 1l0q_A 130 LYVTNNGDKTVSVINTVTKAVINTV-SVGRSPKGIAVTPDGTKVYVAN-FDSMSISVIDTVT--NSVIDTVK-VEAAPSG 204 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEE-ECCSSEEEEEECTTSSEEEEEE-TTTTEEEEEETTT--TEEEEEEE-CSSEEEE
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEE-ecCCCcceEEECCCCCEEEEEe-CCCCEEEEEECCC--CeEEEEEe-cCCCccc
Confidence 9999998999999999877665555 3457789999999999999987 4467899999876 22222222 2347899
Q ss_pred EEEeccccEEEEecc--ceeeeeeeccccceee
Q psy13629 269 IAIDFNNRLLYWIDG--RLTFIEVMDYDGYVRL 299 (395)
Q Consensus 269 lalD~~~~rLYwaD~--~~~~I~~~~~dG~~~~ 299 (395)
+++++.+++||.+.. ..+.|...++......
T Consensus 205 ~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 205 IAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred eEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 999999999999986 6788888887655443
No 113
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.08 E-value=1.3e-08 Score=95.74 Aligned_cols=184 Identities=10% Similarity=0.053 Sum_probs=128.4
Q ss_pred EEEEeeCCCCC--ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEcc--CCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD--GNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~--~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~d--g~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|++++++... ...........+.+++|++.++.||+++..++.|..++++ +.. ............|.++++++
T Consensus 16 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~ 93 (343)
T 1ri6_A 16 QIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA--LTFAAESALPGSLTHISTDH 93 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC--EEEEEEEECSSCCSEEEECT
T ss_pred eEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc--eeeccccccCCCCcEEEEcC
Confidence 56777775322 2333345567789999999999999999777899998887 332 11111112233899999999
Q ss_pred CCCeEEEEeCCCCeEEEEECC-CCceEE-EEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceE----EE
Q psy13629 185 LTEKLYWTDSETNKLEVSSLD-GKKRKV-LYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRK----VI 258 (395)
Q Consensus 185 ~~~~LYwtd~~~~~I~v~~ld-g~~~~~-l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~----~l 258 (395)
.++.||+++...+.|.+.+++ |..... ........|.+++++|..++||+++.+ ...|...+++....-.. .+
T Consensus 94 dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~v~~~d~~~~~~~~~~~~~~~ 172 (343)
T 1ri6_A 94 QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK-QDRICLFTVSDDGHLVAQDPAEV 172 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-GTEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC-CCEEEEEEecCCCceeeeccccc
Confidence 888999999888899999884 322221 122456679999999999999999843 46788877764112221 11
Q ss_pred EecCCcCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 259 VDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 259 v~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
.......|.++++++++++||+++...+.|...+++.
T Consensus 173 ~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 173 TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 1122347999999999999999998888888888753
No 114
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.08 E-value=3.1e-08 Score=94.35 Aligned_cols=183 Identities=11% Similarity=0.047 Sum_probs=123.4
Q ss_pred EEEEeeCCCCCccEEe---cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCC-CCceEEEEeCC--------CCC
Q psy13629 109 DIRIANLSRPLKPVTI---IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNN-VGSKHNVITNG--------LIT 176 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~---~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~-~~~~~~i~~~~--------~~~ 176 (395)
.|.++++++ .....+ ......+.+++|+++++.||+++..++.|..++++... ......+...+ ...
T Consensus 64 ~v~~~~~~~-g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~ 142 (347)
T 3hfq_A 64 GIAAWQIDG-QTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSH 142 (347)
T ss_dssp EEEEEEEET-TEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCC
T ss_pred eEEEEEecC-CcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCC
Confidence 567777755 332222 33567889999999999999999888899888886321 11111111111 124
Q ss_pred cceEEEecCCCeEEEEeCCCCeEEEEECCC-CceEEE---EecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCC
Q psy13629 177 PDGLAIDWLTEKLYWTDSETNKLEVSSLDG-KKRKVL---YWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDP 252 (395)
Q Consensus 177 p~glAVD~~~~~LYwtd~~~~~I~v~~ldg-~~~~~l---~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~ 252 (395)
|.++++++.++ +|+++...++|.+++++. .....+ .......|++++++|+.++||+++.. ...|...+++...
T Consensus 143 ~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~-~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 143 IHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL-SSQIASLKYDTQT 220 (347)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-TTEEEEEEEETTT
T ss_pred ceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC-CCEEEEEEecCCC
Confidence 77899999766 999999999999999883 222211 11335579999999998899998843 5677777776310
Q ss_pred cceEE--EEecC------CcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 253 RHRKV--IVDST------IFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 253 ~~~~~--lv~~~------~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
...+. .+... ...|.++++++++++||+++...+.|...+++
T Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 11111 11111 13588899999999999999888888877765
No 115
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.06 E-value=1.7e-08 Score=96.45 Aligned_cols=154 Identities=13% Similarity=0.096 Sum_probs=114.5
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCC
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 206 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg 206 (395)
....+.|.+|++.++.+||+|...+.|++++.++. ....+.. ...|.++++++ .+++|++.. ..|.++++++
T Consensus 47 ~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~---~~~~~~~--~~~v~~i~~~~-dg~l~v~~~--~gl~~~d~~~ 118 (326)
T 2ghs_A 47 PMLLGEGPTFDPASGTAWWFNILERELHELHLASG---RKTVHAL--PFMGSALAKIS-DSKQLIASD--DGLFLRDTAT 118 (326)
T ss_dssp CCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTT---EEEEEEC--SSCEEEEEEEE-TTEEEEEET--TEEEEEETTT
T ss_pred CCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCC---cEEEEEC--CCcceEEEEeC-CCeEEEEEC--CCEEEEECCC
Confidence 34567899999999999999998999999999875 2222222 35789999997 567777763 4699999976
Q ss_pred CceEEEEecC----CCCceeEEEeCCCCeEEEEeeCC-----CCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccE
Q psy13629 207 KKRKVLYWED----IDQPRAIALVPQDSIMFWTDWGE-----VPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRL 277 (395)
Q Consensus 207 ~~~~~l~~~~----~~~P~~iavdp~~g~LYwtd~~~-----~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~r 277 (395)
...+.+.... ...|+++++||. |.+|+++.+. ...|++++ +| ..+. + ......|++++++.+++.
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~-~g--~~~~-~-~~~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVA-KG--KVTK-L-FADISIPNSICFSPDGTT 192 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTT-SCEEEEEEETTCCTTCEEEEEEE-TT--EEEE-E-EEEESSEEEEEECTTSCE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCcCCCCceEEEEEe-CC--cEEE-e-eCCCcccCCeEEcCCCCE
Confidence 6655554221 246899999984 5688887542 35799998 66 3322 2 234457999999988889
Q ss_pred EEEeccceeeeeeeccc
Q psy13629 278 LYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 278 LYwaD~~~~~I~~~~~d 294 (395)
|||++...+.|.+.+++
T Consensus 193 lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEETTTCEEEEEEBC
T ss_pred EEEEECCCCEEEEEEcc
Confidence 99999888899999875
No 116
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.05 E-value=1.1e-07 Score=88.07 Aligned_cols=183 Identities=11% Similarity=0.090 Sum_probs=121.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCC-CceEEEEeCCCCC-----cceEEE
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV-GSKHNVITNGLIT-----PDGLAI 182 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~-~~~~~i~~~~~~~-----p~glAV 182 (395)
.|..+++.+.-.......+...+.||+++. ++.++.++...++++.+.++.... ......-..-... .+|||+
T Consensus 50 ~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~ 128 (255)
T 3qqz_A 50 AIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAY 128 (255)
T ss_dssp EEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEE
T ss_pred eEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEE
Confidence 677788875322333346678999999985 556778888889999988875421 0111111111123 499999
Q ss_pred ecCCCeEEEEeCCCC-eEEEEE--CCCCceEEEEe------cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc
Q psy13629 183 DWLTEKLYWTDSETN-KLEVSS--LDGKKRKVLYW------EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR 253 (395)
Q Consensus 183 D~~~~~LYwtd~~~~-~I~v~~--ldg~~~~~l~~------~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~ 253 (395)
|+.++.||.+..... .|+..+ +.+....++-. .....+.+|++||.++.||+.. .++.++..++.+|...
T Consensus 129 d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS-~~s~~L~~~d~~g~~~ 207 (255)
T 3qqz_A 129 SRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLS-HESRALQEVTLVGEVI 207 (255)
T ss_dssp ETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEE-TTTTEEEEECTTCCEE
T ss_pred eCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEE-CCCCeEEEEcCCCCEE
Confidence 999999999886554 677776 22222233211 1356799999999999999987 6689999999999321
Q ss_pred ceEEEEec------CCcCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 254 HRKVIVDS------TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 254 ~~~~lv~~------~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
....+... .+.+|.|||+|. +++||++... |.++++..++
T Consensus 208 ~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIvsE~-n~~y~f~~~~ 253 (255)
T 3qqz_A 208 GEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIVSEP-NRFYRFTPQS 253 (255)
T ss_dssp EEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEEETT-TEEEEEEC--
T ss_pred EEEEcCCccCCcccccCCCCeeEECC-CCCEEEEcCC-ceEEEEEecC
Confidence 22222211 246999999995 5679999644 6777776543
No 117
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.05 E-value=2.6e-08 Score=93.69 Aligned_cols=185 Identities=13% Similarity=0.115 Sum_probs=125.6
Q ss_pred EEEEeeCC-C-CCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccC-CCCCceE--EEEeCCCCCcceEEEe
Q psy13629 109 DIRIANLS-R-PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDG-NNVGSKH--NVITNGLITPDGLAID 183 (395)
Q Consensus 109 ~I~~~~l~-~-~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg-~~~~~~~--~i~~~~~~~p~glAVD 183 (395)
.|.+++++ + .............+.+++|++.++.||+++..++.|..++++. ....... .........|.+++++
T Consensus 107 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (343)
T 1ri6_A 107 NVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH 186 (343)
T ss_dssp EEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEEC
T ss_pred eEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEEC
Confidence 46777663 2 1223344456667899999999999999997888999999875 3111111 2222334579999999
Q ss_pred cCCCeEEEEeCCCCeEEEEECCC--Cce--EEEEec---C---CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc
Q psy13629 184 WLTEKLYWTDSETNKLEVSSLDG--KKR--KVLYWE---D---IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR 253 (395)
Q Consensus 184 ~~~~~LYwtd~~~~~I~v~~ldg--~~~--~~l~~~---~---~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~ 253 (395)
+.++.||+++...+.|.+.+++. ... ...+.. . ...|.+++++|.+++||++.. ....|...+++....
T Consensus 187 pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~-~~~~i~v~d~~~~~~ 265 (343)
T 1ri6_A 187 PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR-TASLITVFSVSEDGS 265 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTSC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec-CCCEEEEEEEcCCCC
Confidence 98888999998889999999964 211 111211 1 346778999999999999884 356788888872102
Q ss_pred ceEEEEe-cCCcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 254 HRKVIVD-STIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 254 ~~~~lv~-~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
..+.+.. .....|.+++++.++++||+++...+.|...+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 266 VLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp CEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 2222211 1223499999999999999999777777666444
No 118
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.05 E-value=7e-09 Score=100.46 Aligned_cols=159 Identities=16% Similarity=0.090 Sum_probs=117.4
Q ss_pred ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE------eCCCCCcceEEEecC---CCeEE
Q psy13629 120 KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI------TNGLITPDGLAIDWL---TEKLY 190 (395)
Q Consensus 120 ~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~------~~~~~~p~glAVD~~---~~~LY 190 (395)
..+.++.++..|.+|+|.+++ .||+++...++|+++..++. ....+. ..+...+.|||+++. ++.||
T Consensus 23 ~~~~va~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g---~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lY 98 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTG---RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVY 98 (347)
T ss_dssp EEEEEECCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTC---CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEE
T ss_pred eeEEeecCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCC---cEeeecccCceeecCCCCceeeEeccccccCCEEE
Confidence 456778889999999999875 59999976899999986543 222221 234567999999984 78999
Q ss_pred EEe--CCCCeEEEEECCCC--------ceEEEEe----cCCCCceeEEEeCCCCeEEEEeeC-------------CCCeE
Q psy13629 191 WTD--SETNKLEVSSLDGK--------KRKVLYW----EDIDQPRAIALVPQDSIMFWTDWG-------------EVPKI 243 (395)
Q Consensus 191 wtd--~~~~~I~v~~ldg~--------~~~~l~~----~~~~~P~~iavdp~~g~LYwtd~~-------------~~~~I 243 (395)
++. ...++|.++.+++. ..++++. ...+....|+++| .|+||++. + ...+|
T Consensus 99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~-Gd~~~~~~~qd~~~~~G~I 176 (347)
T 3das_A 99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGT-GESGDTGLSQDRKSLGGKI 176 (347)
T ss_dssp EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEEC-BCTTCGGGTTCTTCSTTCE
T ss_pred EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEE-CCCCCCccccCCCCCCCEE
Confidence 865 35679999998872 2345543 2356788899998 56999995 2 24799
Q ss_pred EEEecCCCCc------ceEEEEecCCcCceeEEEeccccEEEEecccee
Q psy13629 244 ERGAMNGDPR------HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLT 286 (395)
Q Consensus 244 ~~~~~dG~~~------~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~ 286 (395)
.|++.||... .. .++...+..|.||++|. .++||++|...+
T Consensus 177 lRi~~dG~ip~~nPf~~~-~i~a~G~RNp~Gla~dp-~G~L~~~d~g~~ 223 (347)
T 3das_A 177 LRMTPDGEPAPGNPFPGS-PVYSYGHRNVQGLAWDD-KQRLFASEFGQD 223 (347)
T ss_dssp EEECTTSSBCTTCSSTTC-CEEEBCCSBCCEEEECT-TCCEEEEECCSS
T ss_pred EEEeCCCCccCCCCCCCC-eEEeeCCCCcceEEECC-CCCEEEEecCCC
Confidence 9999999310 33 35667788999999997 589999996543
No 119
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.04 E-value=7.9e-09 Score=103.96 Aligned_cols=161 Identities=17% Similarity=0.126 Sum_probs=116.0
Q ss_pred CccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE-eC-------CCCCcceEEEecC---CC
Q psy13629 119 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-TN-------GLITPDGLAIDWL---TE 187 (395)
Q Consensus 119 ~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~-~~-------~~~~p~glAVD~~---~~ 187 (395)
.+.+.++..+..|.+|+|++++ +||+++...++|+++..++. ....+. .. +...+.|||+++. ++
T Consensus 17 f~~~~~a~~l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g---~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g 92 (454)
T 1cru_A 17 FDKKVILSNLNKPHALLWGPDN-QIWLTERATGKILRVNPESG---SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNP 92 (454)
T ss_dssp SCEEEEECCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTC---CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSC
T ss_pred eEEEEEECCCCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCC---cEeEEecCCccccccCCCCceeEEEECCCcCcCC
Confidence 4566777889999999999876 59999977678999886532 222222 11 2234559999987 89
Q ss_pred eEEEEeCC------------CCeEEEEECCCC-----ceEEEEe----cCCCCceeEEEeCCCCeEEEEeeCC-------
Q psy13629 188 KLYWTDSE------------TNKLEVSSLDGK-----KRKVLYW----EDIDQPRAIALVPQDSIMFWTDWGE------- 239 (395)
Q Consensus 188 ~LYwtd~~------------~~~I~v~~ldg~-----~~~~l~~----~~~~~P~~iavdp~~g~LYwtd~~~------- 239 (395)
.||+++.. ..+|.++++++. ..++++. ...+.+.+|+++| .|+||++....
T Consensus 93 ~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~ 171 (454)
T 1cru_A 93 YIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAY 171 (454)
T ss_dssp EEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGG
T ss_pred EEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccc
Confidence 99999853 358999987642 3345553 2357799999999 56899996321
Q ss_pred ------------------------CCeEEEEecCCCCc--------ceEEEEecCCcCceeEEEeccccEEEEeccce
Q psy13629 240 ------------------------VPKIERGAMNGDPR--------HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRL 285 (395)
Q Consensus 240 ------------------------~~~I~~~~~dG~~~--------~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~ 285 (395)
..+|.|++.||..- .+..++...+..|.||++|. .++||++|...
T Consensus 172 ~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~g~ 248 (454)
T 1cru_A 172 LFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQGP 248 (454)
T ss_dssp TTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEECS
T ss_pred cccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEecCC
Confidence 36899999999310 03345667788999999997 68999999654
No 120
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.03 E-value=5.8e-08 Score=90.02 Aligned_cols=180 Identities=14% Similarity=0.018 Sum_probs=127.1
Q ss_pred eEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceE
Q psy13629 131 GAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK 210 (395)
Q Consensus 131 ~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~ 210 (395)
..||.|+ ++.||.+....++|.+++++.... ...+ ...-...+|++++ +++||.+++..+.+.++|.+.....
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv--~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQP--VWME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSC--SEEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEE
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcE--EeEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEE
Confidence 3799998 589999999888999999986543 2334 4443445778876 7899999999999999999876665
Q ss_pred EEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecC---CcCceeEEEeccccEEEEeccceee
Q psy13629 211 VLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDST---IFWPNGIAIDFNNRLLYWIDGRLTF 287 (395)
Q Consensus 211 ~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~---~~~P~glalD~~~~rLYwaD~~~~~ 287 (395)
.-+.. ...+.||+- +++.||.|| + ..+|..++.......+++-+..+ +..+|+|... +++||...+..+.
T Consensus 130 ~ti~~-~~eGwGLt~--Dg~~L~vSd-G-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~ 202 (268)
T 3nok_A 130 RTTRY-SGEGWGLCY--WNGKLVRSD-G-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSD 202 (268)
T ss_dssp EEEEC-SSCCCCEEE--ETTEEEEEC-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSE
T ss_pred EEEeC-CCceeEEec--CCCEEEEEC-C-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCe
Confidence 54533 234566664 488999999 6 78999999876434445555442 4467777765 7799999999999
Q ss_pred eeeeccccceeeeeeeceeeee-eeec-----cCCccccceeeeecc
Q psy13629 288 IEVMDYDGYVRLVTSLGHINLE-LYCN-----VFPKTCENFMKHCEN 328 (395)
Q Consensus 288 I~~~~~dG~~~~~t~~g~~~i~-Lf~d-----~ap~t~~nf~~l~~~ 328 (395)
|.++|........+ +.++ |.++ ..+..+.|-+++...
T Consensus 203 I~vIDp~TG~V~~~----Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 203 VLEIDPATGTVVGV----IDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp EEEECTTTCBEEEE----EECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred EEEEeCCCCcEEEE----EECCCCcccccccccCcCCceEEEEEcCC
Confidence 99999865554442 2222 2221 224557788887764
No 121
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.03 E-value=1e-08 Score=98.07 Aligned_cols=158 Identities=16% Similarity=0.100 Sum_probs=116.5
Q ss_pred CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCC-------CcceEEE---ecCCCeEEE-EeC---
Q psy13629 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLI-------TPDGLAI---DWLTEKLYW-TDS--- 194 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~-------~p~glAV---D~~~~~LYw-td~--- 194 (395)
--|.+.+||...+++|+++...++|.+++.++. ....+....+. .|.||.+ |+. ++|++ ++.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~---~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~a 88 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ---SHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKS 88 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTC---CEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCC---eEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccc
Confidence 457899999999999999999999999999854 22333333322 4789999 675 77777 552
Q ss_pred ---------CCCeEEEEECC----CCceEEEEec------------CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecC
Q psy13629 195 ---------ETNKLEVSSLD----GKKRKVLYWE------------DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMN 249 (395)
Q Consensus 195 ---------~~~~I~v~~ld----g~~~~~l~~~------------~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~d 249 (395)
....+.+++++ |+....+--. ....++++++|+ .|..|+++....+.|.+++.|
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTT
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCC
Confidence 35789999999 4433222101 223589999997 789999995422899999999
Q ss_pred CCCcceEEEEecC-----CcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 250 GDPRHRKVIVDST-----IFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 250 G~~~~~~~lv~~~-----~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
| .....+.... ...++||++++++..|++++. .+++.+++++
T Consensus 168 G--~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 168 G--KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp S--CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred C--CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
Confidence 9 5444443221 234789999999999999998 8999998877
No 122
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.01 E-value=6.8e-08 Score=89.48 Aligned_cols=173 Identities=15% Similarity=0.090 Sum_probs=117.5
Q ss_pred EEEEEeeCCCCCccEEecCCCCCe--EEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEG--AAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~--~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~ 185 (395)
+.|+++|+.. .+.....+....+ .|++.+ +++||..++.++.+++++.+... ...++-.. ++|.++.+.
T Consensus 65 S~v~~vD~~T-gkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~--~~~ti~~~----~eG~glt~d 135 (262)
T 3nol_A 65 SSIRKVDIES-GKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLR--QVRSFNYD----GEGWGLTHN 135 (262)
T ss_dssp EEEEEECTTT-CCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCC--EEEEEECS----SCCCCEEEC
T ss_pred ceEEEEECCC-CcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCc--EEEEEECC----CCceEEecC
Confidence 3688999877 4444333444454 556665 78999999999999999998642 22333332 244444455
Q ss_pred CCeEEEEeCCCCeEEEEECCCCceEEEEe-c----CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe
Q psy13629 186 TEKLYWTDSETNKLEVSSLDGKKRKVLYW-E----DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD 260 (395)
Q Consensus 186 ~~~LYwtd~~~~~I~v~~ldg~~~~~l~~-~----~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~ 260 (395)
++.||.+|. .++|.+.|........-+. . ....++.+... +|+||...|. ...|.+++.... .-...+--
T Consensus 136 g~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~-~~~I~vIDp~tG-~V~~~Id~ 210 (262)
T 3nol_A 136 DQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQ-TNKIVRIDPETG-KVTGIIDL 210 (262)
T ss_dssp SSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT-SSEEEEECTTTC-BEEEEEEC
T ss_pred CCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEcc-CCeEEEEECCCC-cEEEEEEC
Confidence 899999995 7899999998654443222 1 23556666665 7899999987 678999998652 22222222
Q ss_pred cC-----------CcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 261 ST-----------IFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 261 ~~-----------~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
.. ..-|||||+|..+++||++.-.-.+++.+.+.
T Consensus 211 ~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 211 NGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp TTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 11 23689999999999999999777777766653
No 123
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.98 E-value=1.2e-07 Score=87.02 Aligned_cols=173 Identities=14% Similarity=0.062 Sum_probs=118.0
Q ss_pred EEEEEeeCCCCCccEEecCCCCCe--EEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEG--AAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~--~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~ 185 (395)
+.|+++|+.. .+.....+....+ .|++.+ +++||..++.++.+++++.+.-. ...++... .+|.++.+.
T Consensus 43 S~v~~vD~~t-gkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~--~~~ti~~~----~~Gwglt~d 113 (243)
T 3mbr_X 43 SSVRKVDLET-GRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLT--PRARFRYP----GEGWALTSD 113 (243)
T ss_dssp CEEEEEETTT-CCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTE--EEEEEECS----SCCCEEEEC
T ss_pred ceEEEEECCC-CCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCc--EEEEEeCC----CCceEEeeC
Confidence 3788999977 4444444444444 555555 78999999999999999998642 22333332 345555566
Q ss_pred CCeEEEEeCCCCeEEEEECCCCceEEEEec-----CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe
Q psy13629 186 TEKLYWTDSETNKLEVSSLDGKKRKVLYWE-----DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD 260 (395)
Q Consensus 186 ~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~-----~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~ 260 (395)
++.||.+|. .++|.+.|........-+.- .+..++.+.. .+|+||...|. ...|.+++.... .-...+--
T Consensus 114 g~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~--~~G~lyanvw~-s~~I~vIDp~tG-~V~~~idl 188 (243)
T 3mbr_X 114 DSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW--VNGELLANVWL-TSRIARIDPASG-KVVAWIDL 188 (243)
T ss_dssp SSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE--ETTEEEEEETT-TTEEEEECTTTC-BEEEEEEC
T ss_pred CCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE--eCCEEEEEECC-CCeEEEEECCCC-CEEEEEEC
Confidence 899999995 88999999987555433321 1345566554 48999999987 678999999652 22222221
Q ss_pred c------------CCcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 261 S------------TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 261 ~------------~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
. ...-|||||+|..+++||++--.-.+++.+.+.
T Consensus 189 ~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 189 QALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp GGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred CcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 1 123689999999999999998777777766654
No 124
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.97 E-value=2e-07 Score=85.53 Aligned_cols=181 Identities=12% Similarity=-0.006 Sum_probs=125.0
Q ss_pred eEEEEEEcCCCEEEEEECCC--CeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCc
Q psy13629 131 GAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 208 (395)
Q Consensus 131 ~~gl~~d~~~~~lywsd~~~--~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~ 208 (395)
.-||.|+. +.||.+.... ..|.+++++... -...+........+|++++ +++||..+...+.+.++|.+...
T Consensus 23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgk--v~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGR--ILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTSCEEEEEETTTCC--EEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTE
T ss_pred cccEEEEC--CEEEEECCCCCCceEEEEECCCCC--EEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCc
Confidence 46999985 7899998653 589999998653 2233333333445777776 79999999999999999998766
Q ss_pred eEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecC---CcCceeEEEeccccEEEEeccce
Q psy13629 209 RKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDST---IFWPNGIAIDFNNRLLYWIDGRL 285 (395)
Q Consensus 209 ~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~---~~~P~glalD~~~~rLYwaD~~~ 285 (395)
...-+... ..+.||+ ++++.||.|| + ..+|...+.......+++-+..+ +..+|.|... +++||...+.+
T Consensus 97 ~~~ti~~~-~~Gwglt--~dg~~L~vSd-g-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw~s 169 (243)
T 3mbr_X 97 PRARFRYP-GEGWALT--SDDSHLYMSD-G-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVWLT 169 (243)
T ss_dssp EEEEEECS-SCCCEEE--ECSSCEEEEC-S-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTT
T ss_pred EEEEEeCC-CCceEEe--eCCCEEEEEC-C-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEECCC
Confidence 65545332 3455555 5689999999 6 78899999876333344445432 3456776655 88999999999
Q ss_pred eeeeeeccccceeee-eeeceeeeeeeec-----cCCccccceeeeecc
Q psy13629 286 TFIEVMDYDGYVRLV-TSLGHINLELYCN-----VFPKTCENFMKHCEN 328 (395)
Q Consensus 286 ~~I~~~~~dG~~~~~-t~~g~~~i~Lf~d-----~ap~t~~nf~~l~~~ 328 (395)
+.|.++|.....+.. ..++. |.++ .....+.|-+++...
T Consensus 170 ~~I~vIDp~tG~V~~~idl~~----l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDLQA----LVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp TEEEEECTTTCBEEEEEECGG----GSTTTTSCCCTTSSCEEEEEEETT
T ss_pred CeEEEEECCCCCEEEEEECCc----CccccccccCCcCCceEEEEEcCC
Confidence 999999986555544 22222 2221 234557788888764
No 125
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=8.1e-08 Score=91.69 Aligned_cols=176 Identities=14% Similarity=0.092 Sum_probs=120.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCC----CCCcceEEEec
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG----LITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~----~~~p~glAVD~ 184 (395)
.|.+++.++ ...... .....+.++++++.+ +++++. .+.|++++.++. ....+.... ...++++++|+
T Consensus 72 ~i~~~d~~~-~~~~~~-~~~~~v~~i~~~~dg-~l~v~~--~~gl~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~ 143 (326)
T 2ghs_A 72 ELHELHLAS-GRKTVH-ALPFMGSALAKISDS-KQLIAS--DDGLFLRDTATG---VLTLHAELESDLPGNRSNDGRMHP 143 (326)
T ss_dssp EEEEEETTT-TEEEEE-ECSSCEEEEEEEETT-EEEEEE--TTEEEEEETTTC---CEEEEECSSTTCTTEEEEEEEECT
T ss_pred EEEEEECCC-CcEEEE-ECCCcceEEEEeCCC-eEEEEE--CCCEEEEECCCC---cEEEEeeCCCCCCCCCCCCEEECC
Confidence 577788766 333322 223578999999865 466665 346999998754 233333211 24588999998
Q ss_pred CCCeEEEEeCC------CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecC---C-CCcc
Q psy13629 185 LTEKLYWTDSE------TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMN---G-DPRH 254 (395)
Q Consensus 185 ~~~~LYwtd~~------~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~d---G-~~~~ 254 (395)
.+++|+++.. .+.|++++ +|+.. .+. .....|++++++|+.+.|||++.. ..+|.+.+.+ | ....
T Consensus 144 -~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~~-~~~~~~~~i~~s~dg~~lyv~~~~-~~~I~~~d~~~~~Gl~~~~ 218 (326)
T 2ghs_A 144 -SGALWIGTMGRKAETGAGSIYHVA-KGKVT-KLF-ADISIPNSICFSPDGTTGYFVDTK-VNRLMRVPLDARTGLPTGK 218 (326)
T ss_dssp -TSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EEE-EEESSEEEEEECTTSCEEEEEETT-TCEEEEEEBCTTTCCBSSC
T ss_pred -CCCEEEEeCCCcCCCCceEEEEEe-CCcEE-Eee-CCCcccCCeEEcCCCCEEEEEECC-CCEEEEEEcccccCCcccC
Confidence 5678888742 46889988 65433 333 455679999999998899999843 6789999986 4 3333
Q ss_pred eEEEEec--CCcCceeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 255 RKVIVDS--TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 255 ~~~lv~~--~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
++.+... ....|.|+++| .+++||+++...+.|.+++.+|...
T Consensus 219 ~~~~~~~~~~~~~p~gi~~d-~~G~lwva~~~~~~v~~~d~~g~~~ 263 (326)
T 2ghs_A 219 AEVFIDSTGIKGGMDGSVCD-AEGHIWNARWGEGAVDRYDTDGNHI 263 (326)
T ss_dssp CEEEEECTTSSSEEEEEEEC-TTSCEEEEEETTTEEEEECTTCCEE
T ss_pred ceEEEECCCCCCCCCeeEEC-CCCCEEEEEeCCCEEEEECCCCCEE
Confidence 4444432 34579999999 4568999987778899999877543
No 126
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.96 E-value=3.7e-08 Score=98.05 Aligned_cols=198 Identities=11% Similarity=-0.050 Sum_probs=134.8
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEEC---------CCCeEEEEEccCCCCCceEEEEeC------
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTFDGNNVGSKHNVITN------ 172 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~---------~~~~I~~~~~dg~~~~~~~~i~~~------ 172 (395)
..|.++|+.. .+....++.-..| ++++++++++||+++. ..+.|..++..... ....+...
T Consensus 99 ~~VsVID~~t-~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--vv~~I~v~g~~r~~ 174 (426)
T 3c75_H 99 TQQFVIDGST-GRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--PIADIELPDAPRFL 174 (426)
T ss_dssp EEEEEEETTT-TEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EEEEEEETTCCCCC
T ss_pred CeEEEEECCC-CEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--EEEEEECCCccccc
Confidence 5788899877 5555555555678 9999999999999985 35678888877542 23344443
Q ss_pred CCCCcceEEEecCCCeEEEEeCC-CCeEEEEECCCCceEEEEecC-----------------------------------
Q psy13629 173 GLITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVLYWED----------------------------------- 216 (395)
Q Consensus 173 ~~~~p~glAVD~~~~~LYwtd~~-~~~I~v~~ldg~~~~~l~~~~----------------------------------- 216 (395)
....|.++++++.++.||+++.. .+.|.+.|+.......-+.-.
T Consensus 175 ~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~ 254 (426)
T 3c75_H 175 VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVT 254 (426)
T ss_dssp BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEE
T ss_pred cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE
Confidence 13579999999999999999965 678888887654322111000
Q ss_pred ---------------C---------------------------------------------CCcee---EEEeCCCCeEE
Q psy13629 217 ---------------I---------------------------------------------DQPRA---IALVPQDSIMF 233 (395)
Q Consensus 217 ---------------~---------------------------------------------~~P~~---iavdp~~g~LY 233 (395)
. ..|.+ ++++|++++||
T Consensus 255 ~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rly 334 (426)
T 3c75_H 255 NTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIY 334 (426)
T ss_dssp ECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEE
T ss_pred eeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEE
Confidence 0 01333 77888888888
Q ss_pred EEeeC--------CCCeEEEEecCCCCcceEEEEecCCcCceeEEEecccc-EEEEeccceeeeeeeccccceeeee--e
Q psy13629 234 WTDWG--------EVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNR-LLYWIDGRLTFIEVMDYDGYVRLVT--S 302 (395)
Q Consensus 234 wtd~~--------~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~-rLYwaD~~~~~I~~~~~dG~~~~~t--~ 302 (395)
+++.. ....|..+++.....-+++-+.. .|.+|+++.+++ +||++++..+.|.++|........+ .
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~ 411 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQ 411 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred EEecccccccccCCCCEEEEEECCCCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecC
Confidence 88631 12468888877532233333333 599999999998 9999999999999999876655543 3
Q ss_pred ecee-eeeeee
Q psy13629 303 LGHI-NLELYC 312 (395)
Q Consensus 303 ~g~~-~i~Lf~ 312 (395)
.|.. .+.+++
T Consensus 412 vG~~P~~i~~~ 422 (426)
T 3c75_H 412 LGRGPQIITTH 422 (426)
T ss_dssp CSSSCCEEECC
T ss_pred CCCCCcEEEcC
Confidence 4443 554443
No 127
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.95 E-value=1.8e-07 Score=86.64 Aligned_cols=181 Identities=10% Similarity=-0.006 Sum_probs=124.7
Q ss_pred eEEEEEEcCCCEEEEEECCC--CeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCc
Q psy13629 131 GAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 208 (395)
Q Consensus 131 ~~gl~~d~~~~~lywsd~~~--~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~ 208 (395)
..||.|+ ++.||.+.... ..|.+++++... ....+....-...+||+++ +++||.+++..+.+.++|++...
T Consensus 45 tqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgk--v~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 45 TEGFFYR--NGYFYESTGLNGRSSIRKVDIESGK--TLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEE--TTEEEEEEEETTEEEEEEECTTTCC--EEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEEE--CCEEEEECCCCCCceEEEEECCCCc--EEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCc
Confidence 3899998 46999998654 489999998653 2233433333345778886 78999999999999999998766
Q ss_pred eEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec---CCcCceeEEEeccccEEEEeccce
Q psy13629 209 RKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS---TIFWPNGIAIDFNNRLLYWIDGRL 285 (395)
Q Consensus 209 ~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~---~~~~P~glalD~~~~rLYwaD~~~ 285 (395)
...-+... ..+.|++ ++++.||.|| + ..+|..++.......+++-+.. .+..+|.|... +++||...+..
T Consensus 119 ~~~ti~~~-~eG~glt--~dg~~L~~Sd-G-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~ 191 (262)
T 3nol_A 119 QVRSFNYD-GEGWGLT--HNDQYLIMSD-G-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQT 191 (262)
T ss_dssp EEEEEECS-SCCCCEE--ECSSCEEECC-S-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTS
T ss_pred EEEEEECC-CCceEEe--cCCCEEEEEC-C-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccC
Confidence 55444332 2455555 5588999999 6 6889999987633444555543 24567777765 78999999999
Q ss_pred eeeeeeccccceeee-eeeceeeeeeee----ccCCccccceeeeecc
Q psy13629 286 TFIEVMDYDGYVRLV-TSLGHINLELYC----NVFPKTCENFMKHCEN 328 (395)
Q Consensus 286 ~~I~~~~~dG~~~~~-t~~g~~~i~Lf~----d~ap~t~~nf~~l~~~ 328 (395)
+.|.++|.....+.. ..... |.+ ...+..+.|-+++...
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~----L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNG----ILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTT----GGGGSCSCCSSCCCEEEEEEETT
T ss_pred CeEEEEECCCCcEEEEEECCc----CccccccccCcCCceEEEEEcCC
Confidence 999999986555444 22211 222 1234567788888764
No 128
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.92 E-value=4.6e-08 Score=95.03 Aligned_cols=169 Identities=14% Similarity=0.079 Sum_probs=115.7
Q ss_pred CCCCeEEEEEEcC---CCEEEEEECC-------CCeEEEEEccCCC--CCceEEEEeC------CCCCcceEEEecCCCe
Q psy13629 127 DLEEGAAIDYYYK---KSMVCWTDHG-------TEMISCCTFDGNN--VGSKHNVITN------GLITPDGLAIDWLTEK 188 (395)
Q Consensus 127 ~~~~~~gl~~d~~---~~~lywsd~~-------~~~I~~~~~dg~~--~~~~~~i~~~------~~~~p~glAVD~~~~~ 188 (395)
....+.+|+++++ ++.||+++.. ..+|.|+.+++.. +...++++.. ....+.+|++++ .++
T Consensus 64 g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~ 142 (353)
T 2g8s_A 64 GQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGY 142 (353)
T ss_dssp TTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSE
T ss_pred CCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCc
Confidence 3456799999997 8999999754 4589999887531 2233444432 234588999998 669
Q ss_pred EEEEeCC-------------CCeEEEEECCCCc------------eEEEEecCCCCceeEEEeCCCCeEEEEeeCC--CC
Q psy13629 189 LYWTDSE-------------TNKLEVSSLDGKK------------RKVLYWEDIDQPRAIALVPQDSIMFWTDWGE--VP 241 (395)
Q Consensus 189 LYwtd~~-------------~~~I~v~~ldg~~------------~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~--~~ 241 (395)
||++... .++|.+++.+|+. ...+....+.+|.+|++||..|.||++|.+. ..
T Consensus 143 Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~d 222 (353)
T 2g8s_A 143 LFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGD 222 (353)
T ss_dssp EEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCE
T ss_pred EEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCc
Confidence 9999743 3589999999972 2334457889999999999899999999762 23
Q ss_pred eEEEEecCCCC--------------------------cceEEEEecCCcCceeEEEec------cccEEEEeccceeeee
Q psy13629 242 KIERGAMNGDP--------------------------RHRKVIVDSTIFWPNGIAIDF------NNRLLYWIDGRLTFIE 289 (395)
Q Consensus 242 ~I~~~~~dG~~--------------------------~~~~~lv~~~~~~P~glalD~------~~~rLYwaD~~~~~I~ 289 (395)
.|.++...+.- .......-.....|.|+++.. ..+.+|++|...++|.
T Consensus 223 ei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~ 302 (353)
T 2g8s_A 223 EINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVI 302 (353)
T ss_dssp EEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEE
T ss_pred EEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEE
Confidence 44443221100 000001001123699999974 2479999999999999
Q ss_pred eeccccc
Q psy13629 290 VMDYDGY 296 (395)
Q Consensus 290 ~~~~dG~ 296 (395)
++++++.
T Consensus 303 ~~~~~~~ 309 (353)
T 2g8s_A 303 VMSVNGD 309 (353)
T ss_dssp EEEEETT
T ss_pred EEEeCCC
Confidence 9998864
No 129
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.91 E-value=6.7e-08 Score=92.40 Aligned_cols=182 Identities=12% Similarity=0.045 Sum_probs=123.1
Q ss_pred EEEEEeeCCCCCccEEecCCCC-------CeEEEEE---EcCCCEEEE-EEC------------CCCeEEEEEccCCCCC
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLE-------EGAAIDY---YYKKSMVCW-TDH------------GTEMISCCTFDGNNVG 164 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~-------~~~gl~~---d~~~~~lyw-sd~------------~~~~I~~~~~dg~~~~ 164 (395)
..|.+++.++........+... .+.||.+ |+. ++|+. ++. +.+.+.+++++++...
T Consensus 35 g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg 113 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS 113 (334)
T ss_dssp TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC
T ss_pred CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC
Confidence 3777788775222223333322 5789999 777 66776 662 3578999999921100
Q ss_pred ceEEEEe-C------------CCCCcceEEEecCCCeEEEEeCCC-CeEEEEECCCCceEEEEecC-----CCCceeEEE
Q psy13629 165 SKHNVIT-N------------GLITPDGLAIDWLTEKLYWTDSET-NKLEVSSLDGKKRKVLYWED-----IDQPRAIAL 225 (395)
Q Consensus 165 ~~~~i~~-~------------~~~~p~glAVD~~~~~LYwtd~~~-~~I~v~~ldg~~~~~l~~~~-----~~~P~~iav 225 (395)
.....+. . ....++++++|. .|++|+++... +.|.+.+.||+......... ..-++||++
T Consensus 114 ~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~ 192 (334)
T 2p9w_A 114 KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITF 192 (334)
T ss_dssp CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEE
T ss_pred CEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEE
Confidence 1111111 1 223589999997 89999999888 99999999999665544221 233779999
Q ss_pred eCCCCeEEEEeeCCCCeEEEEecCCCCcce-EEEEe-----cCCcCceeE-EEeccccEEEEeccceeeeeeecccc
Q psy13629 226 VPQDSIMFWTDWGEVPKIERGAMNGDPRHR-KVIVD-----STIFWPNGI-AIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 226 dp~~g~LYwtd~~~~~~I~~~~~dG~~~~~-~~lv~-----~~~~~P~gl-alD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
+|.+..|++.+ + ..++.+++++. ..+ .+-+. ..+..|.+| ++.+.++-|++++...+.+...+.||
T Consensus 193 ~pdg~~Liv~~-~-~g~L~~fD~~~--pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 193 DPHSNKLIAFG-G-PRALTAFDVSK--PYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp ETTTTEEEEES-S-SSSEEEEECSS--SSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred eCCCCEEEEEc-C-CCeEEEEcCCC--CcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 99999999998 5 78899999984 222 13232 135579995 66767777799997777776666777
No 130
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.89 E-value=6.9e-07 Score=87.30 Aligned_cols=180 Identities=17% Similarity=0.111 Sum_probs=132.0
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++++++.......+......+.+++|++.++.+|.++..++.|..++++.. . ..........|.++++++.++.
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~---~-~~~~~~~~~~~~~~~~~~~g~~ 267 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK---L-EIRKTDKIGLPRGLLLSKDGKE 267 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT---E-EEEECCCCSEEEEEEECTTSSE
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC---c-EEEEecCCCCceEEEEcCCCCE
Confidence 67888887633333444456789999999999999999988899999998764 2 2222333456899999998889
Q ss_pred EEEEeC-------CCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec
Q psy13629 189 LYWTDS-------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS 261 (395)
Q Consensus 189 LYwtd~-------~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~ 261 (395)
||.+.. ..+.|.+.++.+......+ .....|.+++++|..+.||++. .....|...++++ ......+.
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~-~~~~~v~v~d~~~--~~~~~~~~- 342 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSD-MCCSKIEVYDLKE--KKVQKSIP- 342 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEE-TTTTEEEEEETTT--TEEEEEEE-
T ss_pred EEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEe-cCCCEEEEEECCC--CcEEEEec-
Confidence 988874 4568999999876555444 2234789999999988999997 4467899999885 22222222
Q ss_pred CCcCceeEEEeccccEEEEecccee--------------eeeeeccccce
Q psy13629 262 TIFWPNGIAIDFNNRLLYWIDGRLT--------------FIEVMDYDGYV 297 (395)
Q Consensus 262 ~~~~P~glalD~~~~rLYwaD~~~~--------------~I~~~~~dG~~ 297 (395)
....|.+++++++++.||++....+ .|...+.....
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 3457999999988889999986543 77777765433
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.88 E-value=5e-07 Score=92.73 Aligned_cols=184 Identities=9% Similarity=-0.069 Sum_probs=134.0
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec----
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW---- 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~---- 184 (395)
.|.++|... .+.....+....+.+++|+++++.||.++.. +.|..++++...+ .....+. ....|.++++++
T Consensus 160 ~V~v~D~~t-~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~-~~~~~i~-~g~~p~~va~sp~~~~ 235 (543)
T 1nir_A 160 QIALVDGDS-KKIVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEP-TKVAEIK-IGIEARSVESSKFKGY 235 (543)
T ss_dssp EEEEEETTT-CCEEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSC-EEEEEEE-CCSEEEEEEECCSTTC
T ss_pred eEEEEECCC-ceEEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCC-cEEEEEe-cCCCcceEEeCCCcCC
Confidence 788888876 4444444433348999999999999999965 9999999941111 1122222 345799999999
Q ss_pred CCCeEEEEeCCCCeEEEEECCCCceEEEEecC-----------CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc
Q psy13629 185 LTEKLYWTDSETNKLEVSSLDGKKRKVLYWED-----------IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR 253 (395)
Q Consensus 185 ~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~-----------~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~ 253 (395)
.++.||.++...++|.+.|.........+... ...+.+|+++|.++.+|++. .+..+|..++.+.. .
T Consensus 236 dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~-~~~g~i~vvd~~~~-~ 313 (543)
T 1nir_A 236 EDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV-KETGKVLLVNYKDI-D 313 (543)
T ss_dssp TTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE-TTTTEEEEEECTTS-S
T ss_pred CCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE-CCCCeEEEEEecCC-C
Confidence 89999999988899999998776655444321 22678999999999999988 44788999998652 1
Q ss_pred ceE-EEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceee
Q psy13629 254 HRK-VIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRL 299 (395)
Q Consensus 254 ~~~-~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~ 299 (395)
... ..+. .-.+|.++++|+++++||++....++|..+|.......
T Consensus 314 ~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 314 NLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp SCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred cceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEE
Confidence 222 1222 34579999999999999999988999999998654433
No 132
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.87 E-value=4e-07 Score=88.97 Aligned_cols=178 Identities=19% Similarity=0.160 Sum_probs=132.8
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEEC-------CCCeEEEEEccCCCCCceEEEEeCCCCCcceEE
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH-------GTEMISCCTFDGNNVGSKHNVITNGLITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~-------~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glA 181 (395)
.|+++++.. .+.....+....+.++++++.++.|+.+.. .++.|..++++... ..... .....|.+++
T Consensus 235 ~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---~~~~~-~~~~~~~~~~ 309 (433)
T 3bws_A 235 DISVIDRKT-KLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK---LIDTI-GPPGNKRHIV 309 (433)
T ss_dssp EEEEEETTT-TEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE---EEEEE-EEEECEEEEE
T ss_pred cEEEEECCC-CcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc---EEeec-cCCCCcceEE
Confidence 678888866 444555556677999999999999998875 35688899987642 22222 1123788999
Q ss_pred EecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCC-------------CeEEEEec
Q psy13629 182 IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEV-------------PKIERGAM 248 (395)
Q Consensus 182 VD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~-------------~~I~~~~~ 248 (395)
+++.++.||++....++|.+.++++......+ .....|.+++++|.+++||.+..... ..|...++
T Consensus 310 ~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 310 SGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp ECSSTTEEEEEETTTTEEEEEETTTTEEEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred ECCCCCEEEEEecCCCEEEEEECCCCcEEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 99988899999999999999999976665555 35677999999999999999885421 38999998
Q ss_pred CCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 249 NGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 249 dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
.. ......+.. ...|.+++++++++.||.+....+.|...++++
T Consensus 389 ~~--~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 389 TT--DTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TT--TEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CC--CcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 65 232222322 347999999999999999987778887776654
No 133
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.87 E-value=1.9e-07 Score=86.55 Aligned_cols=173 Identities=9% Similarity=-0.032 Sum_probs=115.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|+++|+........+.+...-..|++++ +++||..++.++.+++++.+... ...++-.. ..+.||+- .++.
T Consensus 76 ~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~--~~~ti~~~--~eGwGLt~--Dg~~ 147 (268)
T 3nok_A 76 TLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQ--RERTTRYS--GEGWGLCY--WNGK 147 (268)
T ss_dssp EEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTE--EEEEEECS--SCCCCEEE--ETTE
T ss_pred EEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCc--EEEEEeCC--CceeEEec--CCCE
Confidence 48889987733332223332233557665 67899999999999999998642 22233322 23445554 4789
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEec-----CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec--
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWE-----DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS-- 261 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~-----~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~-- 261 (395)
||.+| +.++|.+.|........-+.- ....++.+... +|+||.+.|. ...|.+++........++-+..
T Consensus 148 L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~-s~~I~vIDp~TG~V~~~Idl~~L~ 223 (268)
T 3nok_A 148 LVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWH-SSDVLEIDPATGTVVGVIDASALT 223 (268)
T ss_dssp EEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT-CSEEEEECTTTCBEEEEEECHHHH
T ss_pred EEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECC-CCeEEEEeCCCCcEEEEEECCCCc
Confidence 99999 489999999887554433321 13456666655 8899999987 6799999996521222222210
Q ss_pred ---------CCcCceeEEEeccccEEEEeccceeeeeeecc
Q psy13629 262 ---------TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 262 ---------~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~ 293 (395)
...-|||||+|..+++||++.-.-.+++.+.+
T Consensus 224 ~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 224 RAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp HHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred ccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 11368999999999999999877777776665
No 134
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.86 E-value=1.4e-06 Score=83.23 Aligned_cols=163 Identities=9% Similarity=0.015 Sum_probs=114.8
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCC-CCce-EEEEeCC---------CCCcceEEEecCCCeEEEEeCC
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNN-VGSK-HNVITNG---------LITPDGLAIDWLTEKLYWTDSE 195 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~-~~~~-~~i~~~~---------~~~p~glAVD~~~~~LYwtd~~ 195 (395)
....+.++++ .++.||.++...+.|..++++... +... ..+...+ ...|.++++++.++.||+++..
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 175 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG 175 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC
Confidence 4457888888 688999999888999999986432 1111 1111111 1235789999988889999998
Q ss_pred CCeEEEEECCCCce-------------EEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEE--Ee
Q psy13629 196 TNKLEVSSLDGKKR-------------KVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVI--VD 260 (395)
Q Consensus 196 ~~~I~v~~ldg~~~-------------~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~l--v~ 260 (395)
.+.|.+++++.... ..........|++++++|+.++||+++.. ...|...+++. ...+.+ +.
T Consensus 176 ~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~~~~~--g~~~~~~~~~ 252 (361)
T 3scy_A 176 TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-GGTVIAFRYAD--GMLDEIQTVA 252 (361)
T ss_dssp TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-TCEEEEEEEET--TEEEEEEEEE
T ss_pred CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-CCeEEEEEecC--CceEEeEEEe
Confidence 89999998875431 12232456789999999999999999843 56788888764 222111 11
Q ss_pred ---cCCcCceeEEEeccccEEEEeccc-eeeeeeeccc
Q psy13629 261 ---STIFWPNGIAIDFNNRLLYWIDGR-LTFIEVMDYD 294 (395)
Q Consensus 261 ---~~~~~P~glalD~~~~rLYwaD~~-~~~I~~~~~d 294 (395)
.+...|.++++++++++||+++.. .+.|...+++
T Consensus 253 ~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 253 ADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp SCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred cCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 123457899999999999999987 7778776664
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.85 E-value=1.1e-06 Score=82.21 Aligned_cols=133 Identities=9% Similarity=0.008 Sum_probs=94.7
Q ss_pred EEEEeeCCCCCccEEecCCCC---CeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCC----CCcceEE
Q psy13629 109 DIRIANLSRPLKPVTIIKDLE---EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL----ITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~---~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~----~~p~glA 181 (395)
.|.++++.. .+......... .+.++++++.++.+|+++...+.|..++++... ....+..... ..|.+++
T Consensus 12 ~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~ 88 (337)
T 1pby_B 12 KLVVIDTEK-MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--TLGRIDLSTPEERVKSLFGAA 88 (337)
T ss_dssp EEEEEETTT-TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--EEEEEECCBTTEEEECTTCEE
T ss_pred eEEEEECCC-CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--eEeeEEcCCcccccccccceE
Confidence 577788765 33333333333 588999999999999999888999999987642 2222322221 2789999
Q ss_pred EecCCCeEEEEeC-----------CCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecC
Q psy13629 182 IDWLTEKLYWTDS-----------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMN 249 (395)
Q Consensus 182 VD~~~~~LYwtd~-----------~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~d 249 (395)
+++.++.||+++. ..+.|.+.++++......+ .....|.+++++|..++||+++ ..|...+++
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~----~~i~~~d~~ 162 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF-EAPRQITMLAWARDGSKLYGLG----RDLHVMDPE 162 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE-ECCSSCCCEEECTTSSCEEEES----SSEEEEETT
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE-eCCCCcceeEECCCCCEEEEeC----CeEEEEECC
Confidence 9998889999962 3589999999876655555 3356799999999998899884 235555544
No 136
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.82 E-value=3.3e-07 Score=88.97 Aligned_cols=140 Identities=15% Similarity=0.122 Sum_probs=95.5
Q ss_pred CCCeEEEEEccCCCCCceEEEEeCC------CCCcceEEEecC---CCeEEEEeCC--CCeEEEEECCCC-ceEEEEe--
Q psy13629 149 GTEMISCCTFDGNNVGSKHNVITNG------LITPDGLAIDWL---TEKLYWTDSE--TNKLEVSSLDGK-KRKVLYW-- 214 (395)
Q Consensus 149 ~~~~I~~~~~dg~~~~~~~~i~~~~------~~~p~glAVD~~---~~~LYwtd~~--~~~I~v~~ldg~-~~~~l~~-- 214 (395)
..++|+++++++... ..+.+...+ .-.|.||.+... +.+||++|.. ..+|++++++.. ...+++.
T Consensus 81 ~~G~I~~~d~~~~~~-~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEP-AVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSC-CEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCC-ceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 467888888874211 223333332 248999999652 3479999965 566666555432 2233332
Q ss_pred --cCCCCceeEEEeCCCCeEEEEeeC----------------CCCeEEEEecCCCCcceEEEEecCCcCceeEEEecccc
Q psy13629 215 --EDIDQPRAIALVPQDSIMFWTDWG----------------EVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNR 276 (395)
Q Consensus 215 --~~~~~P~~iavdp~~g~LYwtd~~----------------~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~ 276 (395)
..+..|+++++++ .|.+|+++.. ...+|++++.. ..+ .+.+++..||||+++++++
T Consensus 160 ~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~----~~~-~~~~~l~~pNGia~spDg~ 233 (355)
T 3sre_A 160 RHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN----DVR-VVAEGFDFANGINISPDGK 233 (355)
T ss_dssp CCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT----CCE-EEEEEESSEEEEEECTTSS
T ss_pred ccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC----eEE-EeecCCcccCcceECCCCC
Confidence 3478899999998 5778887631 13578888762 223 3445678899999999999
Q ss_pred EEEEeccceeeeeeecccc
Q psy13629 277 LLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 277 rLYwaD~~~~~I~~~~~dG 295 (395)
.||++|...++|.+.++++
T Consensus 234 ~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 234 YVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEEGGGTEEEEEEECT
T ss_pred EEEEEeCCCCeEEEEEECC
Confidence 9999999999999998864
No 137
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.78 E-value=1.3e-06 Score=85.29 Aligned_cols=184 Identities=6% Similarity=-0.107 Sum_probs=121.3
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEEC---------CCCeEEEEEccCCCCCceEEEEeC-C-----
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTFDGNNVGSKHNVITN-G----- 173 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~---------~~~~I~~~~~dg~~~~~~~~i~~~-~----- 173 (395)
.|.++|.+. .+....++.-..+ +++++++++.||+++. .++.|.+++..... ....+... .
T Consensus 48 ~v~v~D~~t-~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--~~~~i~~~~~~~~~~ 123 (373)
T 2mad_H 48 QQWVLDAGS-GSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--PIADIELPDAPRFDV 123 (373)
T ss_pred EEEEEECCC-CeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--EEEEEECCCcccccc
Confidence 667888876 4444445544567 9999999999999984 35678888886432 22333322 0
Q ss_pred CCCcceEEEecCCCeEEEEeCC-CCeEEEEECCCCceEEE-EecC-----------------------------------
Q psy13629 174 LITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVL-YWED----------------------------------- 216 (395)
Q Consensus 174 ~~~p~glAVD~~~~~LYwtd~~-~~~I~v~~ldg~~~~~l-~~~~----------------------------------- 216 (395)
...|.++++++.++.||+++.. .++|.+.| ++...... +...
T Consensus 124 g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~ 202 (373)
T 2mad_H 124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAG 202 (373)
T ss_pred CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEE
Confidence 2569999999999999999865 57788887 54322211 1000
Q ss_pred ------------------------------------------------------------CCCcee---EEEeCCCCeEE
Q psy13629 217 ------------------------------------------------------------IDQPRA---IALVPQDSIMF 233 (395)
Q Consensus 217 ------------------------------------------------------------~~~P~~---iavdp~~g~LY 233 (395)
...|.+ ++++|+.++||
T Consensus 203 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 203 LVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred eccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 001333 67788778888
Q ss_pred EEeeC--------CCCeEEEEecCCCCcceEEEEecCCcCceeEEEecccc-EEEEeccceeeeeeeccccceeee
Q psy13629 234 WTDWG--------EVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNR-LLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 234 wtd~~--------~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~-rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
++.-. ....|..+++......+++.+ -..|.+|+++.+++ ++|.++...+.|.++|........
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~---g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL---GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCCCEEEEEEEC---CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 86421 134688888775211122221 22699999999988 899998888999999987655543
No 138
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.75 E-value=8.8e-07 Score=85.67 Aligned_cols=167 Identities=14% Similarity=0.092 Sum_probs=115.6
Q ss_pred CCCCCeEEEEEEcC---CCEEEEEE--CCCCeEEEEEccCC-----CCCceEEEEe----CCCCCcceEEEecCCCeEEE
Q psy13629 126 KDLEEGAAIDYYYK---KSMVCWTD--HGTEMISCCTFDGN-----NVGSKHNVIT----NGLITPDGLAIDWLTEKLYW 191 (395)
Q Consensus 126 ~~~~~~~gl~~d~~---~~~lywsd--~~~~~I~~~~~dg~-----~~~~~~~i~~----~~~~~p~glAVD~~~~~LYw 191 (395)
.....+.||+++++ ++.||++. ...++|.|+.+++. .+...++++. ........|++++ .++||+
T Consensus 77 ~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyv 155 (347)
T 3das_A 77 SGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYA 155 (347)
T ss_dssp BTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEE
T ss_pred cCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEE
Confidence 34677899999985 78899864 35679999999872 2223444443 2345677899998 679999
Q ss_pred EeC-------------CCCeEEEEECCCC--------ceEEEEecCCCCceeEEEeCCCCeEEEEeeCC--CCeEEEEec
Q psy13629 192 TDS-------------ETNKLEVSSLDGK--------KRKVLYWEDIDQPRAIALVPQDSIMFWTDWGE--VPKIERGAM 248 (395)
Q Consensus 192 td~-------------~~~~I~v~~ldg~--------~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~--~~~I~~~~~ 248 (395)
+.. ..++|.+++.+|+ ..+ +...++.+|.||++|| .|.||++|.+. ...|.++..
T Consensus 156 t~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~-i~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~ 233 (347)
T 3das_A 156 GTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSP-VYSYGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIKP 233 (347)
T ss_dssp ECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCC-EEEBCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEECT
T ss_pred EECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCe-EEeeCCCCcceEEECC-CCCEEEEecCCCCCceeeEEcC
Confidence 952 3689999999997 333 4557899999999999 69999999652 234555432
Q ss_pred CCCC-------c-------ceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 249 NGDP-------R-------HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 249 dG~~-------~-------~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
-+.- . ............|.||++. ++.+|.++.+..+|.++.+++..
T Consensus 234 G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~ 294 (347)
T 3das_A 234 GDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLRGERLWRIPLKGTA 294 (347)
T ss_dssp TCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE--TTEEEEEESTTCSEEEEEEETTE
T ss_pred CCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE--cCceeeccccCCEEEEEEecCCc
Confidence 2100 0 0001111112368899997 68999999888899888887654
No 139
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.73 E-value=6.1e-07 Score=87.65 Aligned_cols=185 Identities=4% Similarity=-0.173 Sum_probs=124.1
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEEC---------CCCeEEEEEccCCCCCceEEEEeCC------
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTFDGNNVGSKHNVITNG------ 173 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~---------~~~~I~~~~~dg~~~~~~~~i~~~~------ 173 (395)
.+.++|.+. .+....++.-..| +++++++++++|+++. .++.|..++..... ...++...+
T Consensus 47 ~vsvID~~t-~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGC-GVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--PIADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTT-TEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--EEEEEEETTSCSCCB
T ss_pred eEEEEECCC-CeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--EEEEEECCCcccccc
Confidence 667888877 5555555555667 9999999999999983 35789999988653 334444431
Q ss_pred CCCcceEEEecCCCeEEEEeCC-CCeEEE--EECCC---------------------------Cc------------eE-
Q psy13629 174 LITPDGLAIDWLTEKLYWTDSE-TNKLEV--SSLDG---------------------------KK------------RK- 210 (395)
Q Consensus 174 ~~~p~glAVD~~~~~LYwtd~~-~~~I~v--~~ldg---------------------------~~------------~~- 210 (395)
...|.++++++.++.||+++.. .+.+.+ .|+.. +. .+
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v 202 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV 202 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEEC
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeE
Confidence 2579999999999999999865 456666 44311 00 00
Q ss_pred -------------------------------EEEec--------------------CCCCcee---EEEeCCCCeEEEEe
Q psy13629 211 -------------------------------VLYWE--------------------DIDQPRA---IALVPQDSIMFWTD 236 (395)
Q Consensus 211 -------------------------------~l~~~--------------------~~~~P~~---iavdp~~g~LYwtd 236 (395)
..+.. ....|.+ ++++|+.++||++.
T Consensus 203 ~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~ 282 (368)
T 1mda_H 203 GAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILT 282 (368)
T ss_dssp CCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred EEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEe
Confidence 00000 0012444 88999999999987
Q ss_pred e-C-C-----CCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEecc-ceeeeeeeccccceeee
Q psy13629 237 W-G-E-----VPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDG-RLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 237 ~-~-~-----~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~-~~~~I~~~~~dG~~~~~ 300 (395)
+ . . ...+..+++.....-+++.+.. .|.||+++.+++++|++.. ..+.|+++|........
T Consensus 283 ~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 283 VEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp EECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred ccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 5 2 2 2345578876521222222332 5999999988889999998 79999999987665554
No 140
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.72 E-value=2.5e-06 Score=87.98 Aligned_cols=184 Identities=9% Similarity=-0.096 Sum_probs=132.2
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEcc-CCCCCceEEEEeCCCCCcceEEEe---
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD-GNNVGSKHNVITNGLITPDGLAID--- 183 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~d-g~~~~~~~~i~~~~~~~p~glAVD--- 183 (395)
+.|.++|.+. .+....++....+.+++++++++.+|.++ .++.|..+++. .+. .....+. ....|.+++++
T Consensus 177 ~~V~viD~~t-~~v~~~i~~g~~p~~v~~SpDGr~lyv~~-~dg~V~viD~~~~t~-~~v~~i~--~G~~P~~ia~s~~~ 251 (567)
T 1qks_A 177 GQIALIDGST-YEIKTVLDTGYAVHISRLSASGRYLFVIG-RDGKVNMIDLWMKEP-TTVAEIK--IGSEARSIETSKME 251 (567)
T ss_dssp TEEEEEETTT-CCEEEEEECSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSSSC-CEEEEEE--CCSEEEEEEECCST
T ss_pred CeEEEEECCC-CeEEEEEeCCCCccceEECCCCCEEEEEc-CCCeEEEEECCCCCC-cEeEEEe--cCCCCceeEEcccc
Confidence 3788899876 44444455556788999999999999998 57899999995 221 1122222 23479999999
Q ss_pred -cCCCeEEEEeCCCCeEEEEECCCCceEEEEecC-----------CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCC
Q psy13629 184 -WLTEKLYWTDSETNKLEVSSLDGKKRKVLYWED-----------IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGD 251 (395)
Q Consensus 184 -~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~-----------~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~ 251 (395)
+.++.+|+++...++|.++|.........+... ...+.+|+.++.+..++++. .+..+|..++....
T Consensus 252 ~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-~~~g~v~~vd~~~~ 330 (567)
T 1qks_A 252 GWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV-KETGKILLVDYTDL 330 (567)
T ss_dssp TCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE-TTTTEEEEEETTCS
T ss_pred CCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe-cCCCeEEEEecCCC
Confidence 588999999999999999997765554444321 11456888888777777666 55788999998652
Q ss_pred CcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 252 PRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 252 ~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
.+..+..-..-..|+++.+|.+++++|+++...++|.++|......
T Consensus 331 -~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 331 -NNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp -SEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred -ccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 1111111122347999999999999999999999999999875543
No 141
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.67 E-value=9.8e-07 Score=85.12 Aligned_cols=161 Identities=14% Similarity=0.009 Sum_probs=108.9
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEcc-CCCCCceEEEEe-CCCCCcceEEEecCCCeE--EEEe-------C-
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD-GNNVGSKHNVIT-NGLITPDGLAIDWLTEKL--YWTD-------S- 194 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~d-g~~~~~~~~i~~-~~~~~p~glAVD~~~~~L--Ywtd-------~- 194 (395)
....+.+++++++++.||.++.. .|..++++ .. ....+.. .....|.++++++.++.| |.++ .
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~--~v~~~~~~~~g---~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK--KWSSFAVKSPT---EIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT--EEEEEEEEETT---EEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc--eEEEEEECCCC---CEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 44578899999999999999865 78888875 32 2221211 111358889999877643 4443 1
Q ss_pred ----CCCeEEEEECC--CCceEEEEe---cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecC-CCCcceEE-EEe--c
Q psy13629 195 ----ETNKLEVSSLD--GKKRKVLYW---EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMN-GDPRHRKV-IVD--S 261 (395)
Q Consensus 195 ----~~~~I~v~~ld--g~~~~~l~~---~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~d-G~~~~~~~-lv~--~ 261 (395)
..+.+.+++++ |+....+.. .....|.+++++|+.++||.++.+ ..+|...+++ .. .-..+ -+. .
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~-~~~v~~~~~~~~g-~~~~~~~~~~~~ 190 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT-ANKLWTHRKLASG-EVELVGSVDAPD 190 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-TTEEEEEEECTTS-CEEEEEEEECSS
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC-CCEEEEEEECCCC-CEEEeeeEecCC
Confidence 46778888875 443322221 245789999999999999999955 5688888886 21 21111 112 1
Q ss_pred CCcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 262 TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 262 ~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
+...|.++++++++++||+++...+.|...+++
T Consensus 191 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 191 PGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 135699999999999999998777788776654
No 142
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.64 E-value=2.4e-06 Score=84.90 Aligned_cols=169 Identities=9% Similarity=0.064 Sum_probs=113.3
Q ss_pred EEEEeeCCCCCccEEecCC--CCC--eEEEEEEcCCCEEEEEECC------------------CCeEEEEEccCCCCCce
Q psy13629 109 DIRIANLSRPLKPVTIIKD--LEE--GAAIDYYYKKSMVCWTDHG------------------TEMISCCTFDGNNVGSK 166 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~--~~~--~~gl~~d~~~~~lywsd~~------------------~~~I~~~~~dg~~~~~~ 166 (395)
.|.++|... .+..-..+. ... ++.+-|.+..+.+|.++++ .++|..++++... ..
T Consensus 165 ~v~vlD~~T-~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~ 241 (462)
T 2ece_A 165 GILMLDHYS-FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RI 241 (462)
T ss_dssp EEEEECTTT-CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EE
T ss_pred eEEEEECCC-CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--Ee
Confidence 477777765 343333332 222 3346668899999998853 7899999998642 22
Q ss_pred EEEEeC-CCCCcceEEE--ecCCCeEEEEeC-----CCCeEEEEECCCCceE--EEE--ec-----C-----------CC
Q psy13629 167 HNVITN-GLITPDGLAI--DWLTEKLYWTDS-----ETNKLEVSSLDGKKRK--VLY--WE-----D-----------ID 218 (395)
Q Consensus 167 ~~i~~~-~~~~p~glAV--D~~~~~LYwtd~-----~~~~I~v~~ldg~~~~--~l~--~~-----~-----------~~ 218 (395)
.++-.. ....|.+|++ ++.++.+|++.. ..+.|.++..++..-. .++ .. . ..
T Consensus 242 ~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~ 321 (462)
T 2ece_A 242 HSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPP 321 (462)
T ss_dssp EEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECC
T ss_pred eEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCC
Confidence 333332 2246888877 998999999998 8889988776653211 111 11 0 25
Q ss_pred CceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCC----------------cCceeEEEeccccEEEEec
Q psy13629 219 QPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTI----------------FWPNGIAIDFNNRLLYWID 282 (395)
Q Consensus 219 ~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~----------------~~P~glalD~~~~rLYwaD 282 (395)
.|.+|.++++.++||+++|+ ...|...+.+.. ...+.+-.-.. ++|.+|++++++++||+++
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg-~d~VavfdV~d~-~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWG-IGEVRQYDISNP-FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCEEECTTSCEEEEEETT-TTEEEEEECSST-TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ceeEEEECCCCCEEEEEeCC-CCEEEEEEecCC-CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 69999999999999999998 567888887421 22222211111 2699999999999999999
No 143
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.63 E-value=2.7e-06 Score=82.37 Aligned_cols=178 Identities=11% Similarity=0.069 Sum_probs=116.1
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEEC---------CCCeEEEEEccCCCCCceEEEEeC-----CC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTFDGNNVGSKHNVITN-----GL 174 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~---------~~~~I~~~~~dg~~~~~~~~i~~~-----~~ 174 (395)
.|.++|... .+.....+....+ +++++++++.||.++. .++.|..++.+... ....+... ..
T Consensus 32 ~v~v~D~~t-~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 32 RVHVYDYTN-GKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--FEKEISLPPKRVQGL 107 (361)
T ss_dssp EEEEEETTT-CCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--EEEEEEECTTBCCBC
T ss_pred eEEEEECCC-CeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--EEEEEEcCccccccC
Confidence 677788765 3444444445667 9999999999999974 24568888876432 22333332 23
Q ss_pred CCcceEEEecCCCeEEEEeCC-CCeEEEEECCCCceEEE---------------------------------Eec-----
Q psy13629 175 ITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVL---------------------------------YWE----- 215 (395)
Q Consensus 175 ~~p~glAVD~~~~~LYwtd~~-~~~I~v~~ldg~~~~~l---------------------------------~~~----- 215 (395)
..|.++++++.++.||.++.. .+.|.+.+++....... ...
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVA 187 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEe
Confidence 579999999999999999865 56676666533211100 000
Q ss_pred -----------------------------------------C--------------------CCCcee---EEEeCCCCe
Q psy13629 216 -----------------------------------------D--------------------IDQPRA---IALVPQDSI 231 (395)
Q Consensus 216 -----------------------------------------~--------------------~~~P~~---iavdp~~g~ 231 (395)
. ...|.| ++++|+.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ 267 (361)
T 2oiz_A 188 SQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR 267 (361)
T ss_dssp EEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred eeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence 0 001333 788888889
Q ss_pred EEEEee--C-------CCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 232 MFWTDW--G-------EVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 232 LYwtd~--~-------~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
+|++.. + ....|..+++.. .....-+..+ . |.+|++++++++||.++. +.|..+|....
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t--~~~v~~i~~~-~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKT--KQRVARIPGR-D-ALSMTIDQQRNLMLTLDG--GNVNVYDISQP 335 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTT--TEEEEEEECT-T-CCEEEEETTTTEEEEECS--SCEEEEECSSS
T ss_pred EEEEEccCCCcccccCCCceEEEEECCC--CcEEEEEecC-C-eeEEEECCCCCEEEEeCC--CeEEEEECCCC
Confidence 998753 1 134788888765 2221112222 2 999999999999999996 88999987655
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.58 E-value=6.9e-06 Score=77.15 Aligned_cols=132 Identities=11% Similarity=-0.009 Sum_probs=91.5
Q ss_pred EEEEeeCCCCCccEEecCCCC--CeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CC-----CCCcceE
Q psy13629 109 DIRIANLSRPLKPVTIIKDLE--EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NG-----LITPDGL 180 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~--~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~-----~~~p~gl 180 (395)
.|.++++.. .+.....+... .+.++++++.++.+|.++..++.|..++++.. .....+. .. ...|.++
T Consensus 22 ~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~---~~~~~~~~~~~~~~~~~~~~~~ 97 (349)
T 1jmx_B 22 NLHVVDVAS-DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC---KNTFHANLSSVPGEVGRSMYSF 97 (349)
T ss_dssp EEEEEETTT-TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEESCCSTTEEEECSSCE
T ss_pred eEEEEECCC-CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC---cEEEEEEcccccccccccccce
Confidence 778888876 33333333223 68899999999999999988899999999864 2222222 22 2348999
Q ss_pred EEecCCCeEEEEeCC-----------CCeEEEEECCCCc---eEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEE
Q psy13629 181 AIDWLTEKLYWTDSE-----------TNKLEVSSLDGKK---RKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERG 246 (395)
Q Consensus 181 AVD~~~~~LYwtd~~-----------~~~I~v~~ldg~~---~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~ 246 (395)
++++.++.||+++.. .+.|.+.++.+.. ..... .....+.+++++|++. ||+++ ..|...
T Consensus 98 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~~~----~~i~~~ 171 (349)
T 1jmx_B 98 AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-LYVAG----PDIYKM 171 (349)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-EEEES----SSEEEE
T ss_pred EECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCCCc-EEEcc----CcEEEE
Confidence 999999999999844 5799999987622 11222 2334688999999776 88864 227777
Q ss_pred ecCC
Q psy13629 247 AMNG 250 (395)
Q Consensus 247 ~~dG 250 (395)
+...
T Consensus 172 d~~~ 175 (349)
T 1jmx_B 172 DVKT 175 (349)
T ss_dssp CTTT
T ss_pred eCCC
Confidence 7654
No 145
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.58 E-value=1.4e-05 Score=76.87 Aligned_cols=183 Identities=15% Similarity=0.121 Sum_probs=123.0
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCC-------EEEEEECC--CCeEEEEEccCCCCCceEEE------EeCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKS-------MVCWTDHG--TEMISCCTFDGNNVGSKHNV------ITNG 173 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~-------~lywsd~~--~~~I~~~~~dg~~~~~~~~i------~~~~ 173 (395)
.+.+++++| ... ...+. ++++++++-+.-. .+|.++.. .++|..+.+|.... ....+ +...
T Consensus 51 gL~Vydl~G-~~l-~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 51 GLVVYSLDG-KML-HSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSMTDPDHPIATA 126 (355)
T ss_dssp EEEEEETTS-CEE-EEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEECSCTTSCEECC
T ss_pred CEEEEcCCC-cEE-EEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeeccccccCcCCC
Confidence 788999977 333 33343 7888888776432 67999988 89999998864321 12222 1244
Q ss_pred CCCcceEEE--ecCCCe--EEEEeCCCCeEEEEEC----CCCceEEEEe--cCCCCceeEEEeCCCCeEEEEeeCCCCeE
Q psy13629 174 LITPDGLAI--DWLTEK--LYWTDSETNKLEVSSL----DGKKRKVLYW--EDIDQPRAIALVPQDSIMFWTDWGEVPKI 243 (395)
Q Consensus 174 ~~~p~glAV--D~~~~~--LYwtd~~~~~I~v~~l----dg~~~~~l~~--~~~~~P~~iavdp~~g~LYwtd~~~~~~I 243 (395)
+..|.||++ ++.++. +|.++.. +++..+.+ +|.....++. ....+|.+|++|+..++||++++. .-|
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd--~GI 203 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED--EAI 203 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT--TEE
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEeccc--ceE
Confidence 588999999 887774 7777765 78877665 2222222222 345789999999999999999965 449
Q ss_pred EEEecCCCCc-ceEEEEe---cCCc-CceeEEEeccc---cEEEEeccceeeeeeecccccee
Q psy13629 244 ERGAMNGDPR-HRKVIVD---STIF-WPNGIAIDFNN---RLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 244 ~~~~~dG~~~-~~~~lv~---~~~~-~P~glalD~~~---~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
++++.+.... .++++.. .++. .|.||+|.+.. ++|++++...++..+.+..+...
T Consensus 204 w~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~ 266 (355)
T 3amr_A 204 WKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNK 266 (355)
T ss_dssp EEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCC
T ss_pred EEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCc
Confidence 9999653211 2333322 2233 79999997433 48999999999888888765433
No 146
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.55 E-value=1.6e-06 Score=89.03 Aligned_cols=179 Identities=11% Similarity=0.036 Sum_probs=125.3
Q ss_pred EEEEeeCCCCCccEE--ecCCCCCeEEEEE-E-cCCCEEEEEE-----------------CCCCeEEEEEccCCCCCceE
Q psy13629 109 DIRIANLSRPLKPVT--IIKDLEEGAAIDY-Y-YKKSMVCWTD-----------------HGTEMISCCTFDGNNVGSKH 167 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~--~~~~~~~~~gl~~-d-~~~~~lywsd-----------------~~~~~I~~~~~dg~~~~~~~ 167 (395)
.|.++|++. .+... .+++...+.|+++ . +++++||+++ ...+.+..++.+... -..
T Consensus 113 rVavIdl~t-~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~--v~~ 189 (595)
T 1fwx_A 113 RVARVRCDV-MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE--VAW 189 (595)
T ss_dssp EEEEEETTT-TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE--EEE
T ss_pred EEEEEECCC-ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCe--EEE
Confidence 689999987 44333 4566788999998 4 8999999995 223467777777531 122
Q ss_pred EEEeCCCCCcceEEEecCCCeEEEEeCCC-------------------------------------CeEEEEECCC--Cc
Q psy13629 168 NVITNGLITPDGLAIDWLTEKLYWTDSET-------------------------------------NKLEVSSLDG--KK 208 (395)
Q Consensus 168 ~i~~~~~~~p~glAVD~~~~~LYwtd~~~-------------------------------------~~I~v~~ldg--~~ 208 (395)
.+...+ .|.++++++.++.+|+|+... +.+.|.|... ..
T Consensus 190 qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~ 267 (595)
T 1fwx_A 190 QVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASS 267 (595)
T ss_dssp EEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCC
T ss_pred EEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCc
Confidence 333333 799999999999999999654 1255555553 11
Q ss_pred e-EEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCC-------Ccce-EEEEecC-CcCceeEEEeccccEE
Q psy13629 209 R-KVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGD-------PRHR-KVIVDST-IFWPNGIAIDFNNRLL 278 (395)
Q Consensus 209 ~-~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~-------~~~~-~~lv~~~-~~~P~glalD~~~~rL 278 (395)
. ...+ ....+|.|+.++|+++++|+++.+ .+.|..++.+.. ...+ .+...-. -..|.++++|.++ ++
T Consensus 268 ~~~~~I-pvg~~PhGv~~sPDGk~v~V~~~~-s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~a 344 (595)
T 1fwx_A 268 LFTRYI-PIANNPHGCNMAPDKKHLCVAGKL-SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NA 344 (595)
T ss_dssp SSEEEE-EEESSCCCEEECTTSSEEEEECTT-SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EE
T ss_pred eeEEEE-ecCCCceEEEEcCCCCEEEEeCCC-CCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eE
Confidence 1 1222 234689999999999999999954 788999998741 0001 1222211 2369999999877 99
Q ss_pred EEeccceeeeeeecccc
Q psy13629 279 YWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 279 YwaD~~~~~I~~~~~dG 295 (395)
|.+..-++.|.+.+++.
T Consensus 345 Y~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 345 YTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEETTTTEEEEEEHHH
T ss_pred EEEEecCCcEEEEEhhH
Confidence 99999889998888876
No 147
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.52 E-value=1.7e-05 Score=81.22 Aligned_cols=190 Identities=13% Similarity=0.038 Sum_probs=130.2
Q ss_pred ccCCCCcee------EEEEEeeC--CCCCccEEecCCCCCeEEEEEEc----CCCEEEEEECCCCeEEEEEccCCCCCce
Q psy13629 99 KLQPDGAYL------LDIRIANL--SRPLKPVTIIKDLEEGAAIDYYY----KKSMVCWTDHGTEMISCCTFDGNNVGSK 166 (395)
Q Consensus 99 ~~~~~~~~~------~~I~~~~l--~~~~~~~~~~~~~~~~~gl~~d~----~~~~lywsd~~~~~I~~~~~dg~~~~~~ 166 (395)
..++++.++ ..|.++++ .. .+....++....+.+++|++ +++.||.++...+.|..++..... ..
T Consensus 185 ~~spdg~~l~v~~~d~~V~v~D~~~~t-~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~--~~ 261 (543)
T 1nir_A 185 RMSASGRYLLVIGRDARIDMIDLWAKE-PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE--PK 261 (543)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSS-CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC--EE
T ss_pred EECCCCCEEEEECCCCeEEEEECcCCC-CcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc--cc
Confidence 455665443 36888998 33 34444445567799999999 999999999778899888766432 22
Q ss_pred EEEEeCC----------CCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCce-E-EEEecCCCCceeEEEeCCCCeEEE
Q psy13629 167 HNVITNG----------LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR-K-VLYWEDIDQPRAIALVPQDSIMFW 234 (395)
Q Consensus 167 ~~i~~~~----------~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~-~-~l~~~~~~~P~~iavdp~~g~LYw 234 (395)
.++...+ -..+.++++.+.++.+|++....++|.+.+...... . ..+ .....|++++++|..+++|.
T Consensus 262 ~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 262 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMT 340 (543)
T ss_dssp EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEE
T ss_pred eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEE
Confidence 3332211 125778999998999999999999999999876432 2 233 34677999999999999999
Q ss_pred EeeCCCCeEEEEecCCCCcceEEEEec-CCcCc-eeEEE-eccccEEEEecc-ceeeeeeecccc
Q psy13629 235 TDWGEVPKIERGAMNGDPRHRKVIVDS-TIFWP-NGIAI-DFNNRLLYWIDG-RLTFIEVMDYDG 295 (395)
Q Consensus 235 td~~~~~~I~~~~~dG~~~~~~~lv~~-~~~~P-~glal-D~~~~rLYwaD~-~~~~I~~~~~dG 295 (395)
+... ..+|..++... ......+.. ...+| .|..+ ++..+++|++.. ..++|..++.+.
T Consensus 341 a~~~-~~~v~v~D~~t--g~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANN-SNKVAVIDSKD--RRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEGG-GTEEEEEETTT--TEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EecC-CCeEEEEECCC--CeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 8843 57888888865 222222221 11123 25554 556688888875 568898888765
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.50 E-value=1.5e-05 Score=74.40 Aligned_cols=149 Identities=11% Similarity=-0.043 Sum_probs=103.4
Q ss_pred EEEEEECCCCeEEEEEccCCCCCceEEEEeCCCC-CcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecC----
Q psy13629 142 MVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLI-TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWED---- 216 (395)
Q Consensus 142 ~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~-~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~---- 216 (395)
.++++...++.|..+++.... ....+...... .|.++++++.++.+|+++...+.|.+.++.+......+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA--VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE--EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCc--EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence 356666677888888887541 11222222212 59999999988899999988899999999766554434221
Q ss_pred -CCCceeEEEeCCCCeEEEEeeC----------CCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccce
Q psy13629 217 -IDQPRAIALVPQDSIMFWTDWG----------EVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRL 285 (395)
Q Consensus 217 -~~~P~~iavdp~~g~LYwtd~~----------~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~ 285 (395)
...|.+++++|.+++||+++.+ ....|...++++ ......+.. -..|.++++++++++||+++
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~--~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~--- 153 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET--LSRRKAFEA-PRQITMLAWARDGSKLYGLG--- 153 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT--TEEEEEEEC-CSSCCCEEECTTSSCEEEES---
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC--CcEEEEEeC-CCCcceeEECCCCCEEEEeC---
Confidence 1279999999999999999521 257899999876 222222222 24689999998888999994
Q ss_pred eeeeeecccccee
Q psy13629 286 TFIEVMDYDGYVR 298 (395)
Q Consensus 286 ~~I~~~~~dG~~~ 298 (395)
+.|...++++...
T Consensus 154 ~~i~~~d~~~~~~ 166 (337)
T 1pby_B 154 RDLHVMDPEAGTL 166 (337)
T ss_dssp SSEEEEETTTTEE
T ss_pred CeEEEEECCCCcE
Confidence 5677777765443
No 149
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.50 E-value=2e-05 Score=77.60 Aligned_cols=182 Identities=9% Similarity=0.088 Sum_probs=129.3
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECC--CCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHG--TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~--~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~ 186 (395)
.|++.++.+ .+...+........+++|+++++.|+++... ...|+.+++++. .. ..+.........++..+.+
T Consensus 204 ~i~~~d~~t-g~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~---~~-~~l~~~~~~~~~~~~spdg 278 (415)
T 2hqs_A 204 ALVIQTLAN-GAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG---QI-RQVTDGRSNNTEPTWFPDS 278 (415)
T ss_dssp EEEEEETTT-CCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC---CE-EECCCCSSCEEEEEECTTS
T ss_pred EEEEEECCC-CcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC---CE-EeCcCCCCcccceEECCCC
Confidence 688888876 4444555555678899999999999987644 346999998865 22 2333333456788888888
Q ss_pred CeEEEEeCC--CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeC-CCCeEEEEecCCCCcceEEEEecCC
Q psy13629 187 EKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWG-EVPKIERGAMNGDPRHRKVIVDSTI 263 (395)
Q Consensus 187 ~~LYwtd~~--~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~-~~~~I~~~~~dG~~~~~~~lv~~~~ 263 (395)
+.|+++... ..+|++.++++.....+. ........++++|+.++|+++... ....|...++++ ...+.+...
T Consensus 279 ~~l~~~s~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~--~~~~~l~~~-- 353 (415)
T 2hqs_A 279 QNLAFTSDQAGRPQVYKVNINGGAPQRIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--GGVQVLSST-- 353 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTSSCCEECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT--CCEEECCCS--
T ss_pred CEEEEEECCCCCcEEEEEECCCCCEEEEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC--CCEEEecCC--
Confidence 888887643 348999999887655543 334567789999999999888743 246899999987 344433332
Q ss_pred cCceeEEEeccccEEEEeccce--eeeeeeccccceeee
Q psy13629 264 FWPNGIAIDFNNRLLYWIDGRL--TFIEVMDYDGYVRLV 300 (395)
Q Consensus 264 ~~P~glalD~~~~rLYwaD~~~--~~I~~~~~dG~~~~~ 300 (395)
.....+++.++++.|+++.... ..|+.++++|.....
T Consensus 354 ~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~ 392 (415)
T 2hqs_A 354 FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR 392 (415)
T ss_dssp SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE
T ss_pred CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEE
Confidence 2678899998888888876433 378899988776544
No 150
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.47 E-value=3.6e-05 Score=75.73 Aligned_cols=183 Identities=10% Similarity=0.075 Sum_probs=131.4
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCC--CeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~--~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~ 185 (395)
..|+++++++ .....+........+++|+++++.|+++.... ..|+..++++. .... +.........+++.+.
T Consensus 159 ~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg---~~~~-l~~~~~~~~~~~~spd 233 (415)
T 2hqs_A 159 YELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG---AVRQ-VASFPRHNGAPAFSPD 233 (415)
T ss_dssp EEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC---CEEE-EECCSSCEEEEEECTT
T ss_pred ceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC---cEEE-eecCCCcccCEEEcCC
Confidence 5788889887 45555555667889999999999999887543 58999999865 3333 3333446778999998
Q ss_pred CCeEEEEeCC--CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEee-CCCCeEEEEecCCCCcceEEEEecC
Q psy13629 186 TEKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDW-GEVPKIERGAMNGDPRHRKVIVDST 262 (395)
Q Consensus 186 ~~~LYwtd~~--~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~-~~~~~I~~~~~dG~~~~~~~lv~~~ 262 (395)
++.|+++... ...|++.++++.....+. ........++++|++.+|+++.. ....+|++.++++ ...+.+. .+
T Consensus 234 g~~la~~~~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~--~~~~~l~-~~ 309 (415)
T 2hqs_A 234 GSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING--GAPQRIT-WE 309 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEECC-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCCEECC-CS
T ss_pred CCEEEEEEecCCCceEEEEECCCCCEEeCc-CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC--CCEEEEe-cC
Confidence 8889887643 456999999887665544 44456788999999888887763 2456899999987 3333332 23
Q ss_pred CcCceeEEEeccccEEEEeccc--eeeeeeeccccceee
Q psy13629 263 IFWPNGIAIDFNNRLLYWIDGR--LTFIEVMDYDGYVRL 299 (395)
Q Consensus 263 ~~~P~glalD~~~~rLYwaD~~--~~~I~~~~~dG~~~~ 299 (395)
......++++++++.|+++... ...|...++++....
T Consensus 310 ~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 310 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 3456678899899999888653 467888888765543
No 151
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.42 E-value=5.1e-06 Score=85.23 Aligned_cols=152 Identities=9% Similarity=0.021 Sum_probs=109.9
Q ss_pred CCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEE-e-cCCCeEEEEe-----------------CCCCeE
Q psy13629 139 KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAI-D-WLTEKLYWTD-----------------SETNKL 199 (395)
Q Consensus 139 ~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAV-D-~~~~~LYwtd-----------------~~~~~I 199 (395)
+++.||+.|..+++|.|++++.-. ....+.......|+|+++ . +.++.+|.++ ...+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~--~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMK--CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTE--EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCce--EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 578999999999999999999752 122233344578999998 4 7899999995 344588
Q ss_pred EEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCC------------------------------------CeE
Q psy13629 200 EVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEV------------------------------------PKI 243 (395)
Q Consensus 200 ~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~------------------------------------~~I 243 (395)
.+.|.+.....-.+.-+. +|.+++++|+.+++|+|..... ..|
T Consensus 178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999988755443332223 8999999999999999985421 124
Q ss_pred EEEecCC--CCc-ceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 244 ERGAMNG--DPR-HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 244 ~~~~~dG--~~~-~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
..++... ... .+.+-+.. .|+|+.++++++++|+++...++|.+++++..
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~---~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEES---SCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred EEEeCcccCCceeEEEEecCC---CceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 4444432 001 12222332 69999999999999999999999999998854
No 152
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.41 E-value=2.1e-05 Score=76.66 Aligned_cols=146 Identities=8% Similarity=-0.073 Sum_probs=97.5
Q ss_pred cCCCEEEEEEC-CCC---eEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeC---------CCCeEEEEEC
Q psy13629 138 YKKSMVCWTDH-GTE---MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDS---------ETNKLEVSSL 204 (395)
Q Consensus 138 ~~~~~lywsd~-~~~---~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~---------~~~~I~v~~l 204 (395)
+..+.+|.+|. ..+ .|.+++.+... ....+. ....| ++++++.++.||+++. ..+.|.++|.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~---~~~~i~-~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGS---ILGHVN-GGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCe---EEEEec-CCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 55678999886 444 77888887542 122222 23457 9999999999999984 3567999998
Q ss_pred CCCceEEEEecC-------CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccE
Q psy13629 205 DGKKRKVLYWED-------IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRL 277 (395)
Q Consensus 205 dg~~~~~l~~~~-------~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~r 277 (395)
.......-+... ...|++++++|+.++||+++......|..++ +. .+ .+.. -+..|.++.+...+++
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t---~~-~~~~-~i~~~~~~~~~~~~~~ 178 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QG---GS-SDDQ-LLSSPTCYHIHPGAPS 178 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CC---CC-EEeE-EcCCCceEEEEeCCCc
Confidence 754433222111 3579999999999999999854457899998 65 22 1111 0223455556556677
Q ss_pred EEEeccceeeeeeeccc
Q psy13629 278 LYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 278 LYwaD~~~~~I~~~~~d 294 (395)
.|++....+++..++.+
T Consensus 179 ~~~~~~~dg~~~~vd~~ 195 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDHA 195 (373)
T ss_pred eEEEEcCCCCEEEEECC
Confidence 78877777777666663
No 153
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.41 E-value=5e-06 Score=82.64 Aligned_cols=108 Identities=10% Similarity=-0.085 Sum_probs=81.1
Q ss_pred cCCCEEEEEECCC----CeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeC---------CCCeEEEEEC
Q psy13629 138 YKKSMVCWTDHGT----EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDS---------ETNKLEVSSL 204 (395)
Q Consensus 138 ~~~~~lywsd~~~----~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~---------~~~~I~v~~l 204 (395)
+..+++|+++... +.|.+++.+... ...++-. ...| |+++++.++.||+++. ..+.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~--vv~~I~v--G~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGR--ILGMTDG--GFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTE--EEEEEEE--CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCE--EEEEEEC--CCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 3568899999765 789999988652 1222332 2468 9999999999999985 3568999998
Q ss_pred CCCceEEEEe-c------CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 205 DGKKRKVLYW-E------DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 205 dg~~~~~l~~-~------~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
.......-+. . ....|.+++++|+.++||++++.....|..+++..
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 7765543222 2 14679999999999999999865567899999876
No 154
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.41 E-value=6.2e-06 Score=82.74 Aligned_cols=114 Identities=16% Similarity=0.176 Sum_probs=80.2
Q ss_pred EEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEe--cC------CCCceeEEEeCC---CCeEEEE
Q psy13629 167 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYW--ED------IDQPRAIALVPQ---DSIMFWT 235 (395)
Q Consensus 167 ~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~--~~------~~~P~~iavdp~---~g~LYwt 235 (395)
.+++..++..|.+|++++ .++||+++...++|.+.+.++.....+.. .. ...+.|||++|+ +++||++
T Consensus 19 ~~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 445567799999999998 57899999877789999875333333321 21 234559999998 9999999
Q ss_pred eeC-------C----CCeEEEEecCCC---CcceEEEEe----cCCcCceeEEEeccccEEEEec
Q psy13629 236 DWG-------E----VPKIERGAMNGD---PRHRKVIVD----STIFWPNGIAIDFNNRLLYWID 282 (395)
Q Consensus 236 d~~-------~----~~~I~~~~~dG~---~~~~~~lv~----~~~~~P~glalD~~~~rLYwaD 282 (395)
+.. . ..+|.|+..++. ....++++. ...+++++|+++.+ ++||++.
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~Lyv~~ 161 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTI 161 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEE
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCC-CeEEEEE
Confidence 852 0 358999998652 123445553 23467999999964 5799983
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.39 E-value=2.2e-05 Score=73.69 Aligned_cols=158 Identities=10% Similarity=-0.048 Sum_probs=107.0
Q ss_pred EEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEE
Q psy13629 133 AIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVL 212 (395)
Q Consensus 133 gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l 212 (395)
|+++.. ++.+|.+...++.|.+++.+... ....+.......|.++++++.++.+|+++...+.|.+.++++......
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDT--VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTE--EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCc--EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 455553 57789998889999999987642 122232222236999999998888999998889999999987655544
Q ss_pred EecC------CCCceeEEEeCCCCeEEEEeeC----------CCCeEEEEecCCCCcceEEEEecCCcCceeEEEecccc
Q psy13629 213 YWED------IDQPRAIALVPQDSIMFWTDWG----------EVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNR 276 (395)
Q Consensus 213 ~~~~------~~~P~~iavdp~~g~LYwtd~~----------~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~ 276 (395)
+... ...|.+++++|++++||++... ....|...+++.......+.....-..+.+++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 4221 2348999999999999998732 13688888886411111111112223578889997776
Q ss_pred EEEEeccceeeeeeeccccce
Q psy13629 277 LLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 277 rLYwaD~~~~~I~~~~~dG~~ 297 (395)
||+++. .|..++.....
T Consensus 161 -l~~~~~---~i~~~d~~~~~ 177 (349)
T 1jmx_B 161 -LYVAGP---DIYKMDVKTGK 177 (349)
T ss_dssp -EEEESS---SEEEECTTTCC
T ss_pred -EEEccC---cEEEEeCCCCc
Confidence 888653 37777765433
No 156
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.38 E-value=2.2e-05 Score=78.06 Aligned_cols=131 Identities=10% Similarity=-0.011 Sum_probs=91.4
Q ss_pred ceeEEEEEeeCCCCCccEEecCCC---CCeEEEEE--EcCCCEEEEEEC-----CCCeEEEEEccCCCCCceEEEEeCC-
Q psy13629 105 AYLLDIRIANLSRPLKPVTIIKDL---EEGAAIDY--YYKKSMVCWTDH-----GTEMISCCTFDGNNVGSKHNVITNG- 173 (395)
Q Consensus 105 ~~~~~I~~~~l~~~~~~~~~~~~~---~~~~gl~~--d~~~~~lywsd~-----~~~~I~~~~~dg~~~~~~~~i~~~~- 173 (395)
.+.+.|.+++++. .+....++.. ..+..|.| ++.++.+|++.. .++.|.++..++......+++-...
T Consensus 225 ~~~d~V~v~D~~~-~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~ 303 (462)
T 2ece_A 225 RYGNRIHFWDLRK-RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAE 303 (462)
T ss_dssp HSCCEEEEEETTT-TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCE
T ss_pred ccCCEEEEEECCC-CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCc
Confidence 3457888899876 3333222221 35677766 999999999998 8889988888764222222221111
Q ss_pred ----------------CCCcceEEEecCCCeEEEEeCCCCeEEEEECC-CCceEE--EEecCC----------C----Cc
Q psy13629 174 ----------------LITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKV--LYWEDI----------D----QP 220 (395)
Q Consensus 174 ----------------~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ld-g~~~~~--l~~~~~----------~----~P 220 (395)
...|.+|++...++.||+++...+.|.+++.+ ....+. .+..+. . .|
T Consensus 304 ~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggP 383 (462)
T 2ece_A 304 PLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAP 383 (462)
T ss_dssp ECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCC
T ss_pred cccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCC
Confidence 25699999999999999999999999999985 322221 221221 1 59
Q ss_pred eeEEEeCCCCeEEEEe
Q psy13629 221 RAIALVPQDSIMFWTD 236 (395)
Q Consensus 221 ~~iavdp~~g~LYwtd 236 (395)
++++++|++++||+++
T Consensus 384 r~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 384 QMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCEEECTTSSEEEEEC
T ss_pred CEEEEcCCCCEEEEEc
Confidence 9999999999999998
No 157
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.36 E-value=6.3e-05 Score=68.15 Aligned_cols=181 Identities=13% Similarity=0.026 Sum_probs=124.6
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccC-CCCCceEEEEeCC-CCCcceEEEecC
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDG-NNVGSKHNVITNG-LITPDGLAIDWL 185 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg-~~~~~~~~i~~~~-~~~p~glAVD~~ 185 (395)
..|+++++.+ .....+......+.+++|++.++.|+++. .+.|+.+++++ . ....+.... ...+.++++.+.
T Consensus 22 ~~i~~~d~~~-~~~~~~~~~~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 22 SSIEIFNIRT-RKMRVVWQTPELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDP---SPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp EEEEEEETTT-TEEEEEEEESSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCC---SCEECCCTTCCCBCSCCEECTT
T ss_pred eeEEEEeCCC-CceeeeccCCcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCC---CceEeccccccccccceEECCC
Confidence 5778888876 44445555567789999999999888875 67999999987 5 223333222 245788999998
Q ss_pred CCeEEEEeCC---CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeC-CCCeEEEEecCCCCcceEEEEec
Q psy13629 186 TEKLYWTDSE---TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWG-EVPKIERGAMNGDPRHRKVIVDS 261 (395)
Q Consensus 186 ~~~LYwtd~~---~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~-~~~~I~~~~~dG~~~~~~~lv~~ 261 (395)
++.|+++... ...|...++++.....+. .......++++|++.+|+++... ...+|+.++.++ ...+ .+..
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~--~~~~-~~~~ 170 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTPRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS--GVET-RLTH 170 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCCEECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT--CCEE-ECCC
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCceEEee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECCC--Ccce-Eccc
Confidence 8889888732 578999998877655443 23348889999999988866533 334677777766 3333 3333
Q ss_pred CCcCceeEEEeccccEEEEec--cceeeeeeeccccceee
Q psy13629 262 TIFWPNGIAIDFNNRLLYWID--GRLTFIEVMDYDGYVRL 299 (395)
Q Consensus 262 ~~~~P~glalD~~~~rLYwaD--~~~~~I~~~~~dG~~~~ 299 (395)
....+..++++++++.|+++. .....|+.++.++....
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~ 210 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE 210 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcE
Confidence 344678899998888888774 34456666665554443
No 158
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.33 E-value=7.5e-06 Score=82.30 Aligned_cols=162 Identities=13% Similarity=0.099 Sum_probs=111.2
Q ss_pred CccEEecCCCCCeEEEEEEcCCC-EEEEEECCCCeEEEEEccCCCCCc-eEE---EEeCC-----CCCcceEEEecC---
Q psy13629 119 LKPVTIIKDLEEGAAIDYYYKKS-MVCWTDHGTEMISCCTFDGNNVGS-KHN---VITNG-----LITPDGLAIDWL--- 185 (395)
Q Consensus 119 ~~~~~~~~~~~~~~gl~~d~~~~-~lywsd~~~~~I~~~~~dg~~~~~-~~~---i~~~~-----~~~p~glAVD~~--- 185 (395)
..++.++..+..|.+|+|.+++. +||+++ ..++|++++.+|..... ... ++..+ ...+-|||+++.
T Consensus 4 f~v~~va~gL~~P~~~a~~pdG~~rl~V~e-r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~ 82 (463)
T 2wg3_C 4 FCIQEVVSGLRQPVGALHSGDGSQRLFILE-KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKK 82 (463)
T ss_dssp EEEEEEEEEESSEEEEECCSSSSCCEEEEE-TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHH
T ss_pred eEEEEeccCCCCceEEEECCCCCeEEEEEe-CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcC
Confidence 34567778899999999999885 799998 56889998776642100 111 11111 345778999985
Q ss_pred CCeEEEEeCC--C----------CeEEEEECCCC--------ceEEEEe----cCCCCceeEEEeCCCCeEEEEeeCC--
Q psy13629 186 TEKLYWTDSE--T----------NKLEVSSLDGK--------KRKVLYW----EDIDQPRAIALVPQDSIMFWTDWGE-- 239 (395)
Q Consensus 186 ~~~LYwtd~~--~----------~~I~v~~ldg~--------~~~~l~~----~~~~~P~~iavdp~~g~LYwtd~~~-- 239 (395)
++.||++... . .+|.++.++.. ..++++. ...+....|+++| .|+||++- |+
T Consensus 83 n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~-Gd~~ 160 (463)
T 2wg3_C 83 NGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIIL-GDGM 160 (463)
T ss_dssp HCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEE-CCTT
T ss_pred CCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEe-CCCC
Confidence 6889988532 1 47888887531 2344443 2356778899999 56999995 31
Q ss_pred ---------------CCeEEEEecCCCC------c-----------ceEEEEecCCcCceeEEEecccc------EEEEe
Q psy13629 240 ---------------VPKIERGAMNGDP------R-----------HRKVIVDSTIFWPNGIAIDFNNR------LLYWI 281 (395)
Q Consensus 240 ---------------~~~I~~~~~dG~~------~-----------~~~~lv~~~~~~P~glalD~~~~------rLYwa 281 (395)
..+|.|++.||.. . .+..+....+..|.||++|...+ ++|.+
T Consensus 161 ~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~ 240 (463)
T 2wg3_C 161 ITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCS 240 (463)
T ss_dssp CCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEE
T ss_pred CCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEec
Confidence 3689999999920 0 13356777889999999997633 78888
Q ss_pred cc
Q psy13629 282 DG 283 (395)
Q Consensus 282 D~ 283 (395)
|.
T Consensus 241 D~ 242 (463)
T 2wg3_C 241 DS 242 (463)
T ss_dssp CC
T ss_pred cc
Confidence 85
No 159
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.26 E-value=9.2e-06 Score=79.62 Aligned_cols=116 Identities=9% Similarity=-0.011 Sum_probs=86.5
Q ss_pred ecCCCeEEEEeCC----CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeC--------CCCeEEEEecCC
Q psy13629 183 DWLTEKLYWTDSE----TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWG--------EVPKIERGAMNG 250 (395)
Q Consensus 183 D~~~~~LYwtd~~----~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~--------~~~~I~~~~~dG 250 (395)
++..+.+|++|.. .++|.++|.+.......+ .....|. ++++|+.++||++++. ....|..++...
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I-~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMI-DGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEE-EECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEE-ECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 4678999999986 689999999876665555 3355685 9999999999999852 235688888876
Q ss_pred CCcceEEEEec-----CCcCceeEEEeccccEEEEeccc-eeeeeeeccccceeee
Q psy13629 251 DPRHRKVIVDS-----TIFWPNGIAIDFNNRLLYWIDGR-LTFIEVMDYDGYVRLV 300 (395)
Q Consensus 251 ~~~~~~~lv~~-----~~~~P~glalD~~~~rLYwaD~~-~~~I~~~~~dG~~~~~ 300 (395)
.....++.+.. ....|.+++++.++++||+++.. .+.|.++|........
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~ 174 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR 174 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE
Confidence 32223333322 02379999999999999999864 7899999987766544
No 160
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.20 E-value=0.00022 Score=64.47 Aligned_cols=180 Identities=9% Similarity=0.001 Sum_probs=117.5
Q ss_pred EEEEeeCCCCCccEEecCC--CCCeEEEEEEcCCCEEEEEECC---CCeEEEEEccCCCCCceEEEEeCCCCCcceEEEe
Q psy13629 109 DIRIANLSRPLKPVTIIKD--LEEGAAIDYYYKKSMVCWTDHG---TEMISCCTFDGNNVGSKHNVITNGLITPDGLAID 183 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~--~~~~~gl~~d~~~~~lywsd~~---~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD 183 (395)
.|.++++.+......+... ...+..++|+++++.|+++... ...|+.++.++. ....+ .....+..+++.
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~--~~~~~~~~~~~s 137 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG---TPRLM--TKNLPSYWHGWS 137 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC---CCEEC--CSSSSEEEEEEC
T ss_pred eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCC---ceEEe--ecCCCccceEEC
Confidence 6778887661223333332 2556789999999999998743 467888888765 22222 222347778888
Q ss_pred cCCCeEEEEeCCCC--eEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEee-CCCCeEEEEecCCCCcceEEEEe
Q psy13629 184 WLTEKLYWTDSETN--KLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDW-GEVPKIERGAMNGDPRHRKVIVD 260 (395)
Q Consensus 184 ~~~~~LYwtd~~~~--~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~-~~~~~I~~~~~dG~~~~~~~lv~ 260 (395)
+.++.|+++....+ .|..+++++.....+. .....+..++++|.+.+|+++.. ....+|+.++.++ ...+.+ .
T Consensus 138 pdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~--~~~~~~-~ 213 (297)
T 2ojh_A 138 PDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG--SSVERI-T 213 (297)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCEEEC-C
T ss_pred CCCCEEEEEECCCCceEEEEEECCCCcceEcc-cCCCccccceECCCCCEEEEEecCCCCccEEEECCCC--CCcEEE-e
Confidence 88888887765555 5666667666554443 44567899999999888888753 3467888888776 333333 2
Q ss_pred cCCcCceeEEEeccccEEEEeccc----------eeeeeeeccccce
Q psy13629 261 STIFWPNGIAIDFNNRLLYWIDGR----------LTFIEVMDYDGYV 297 (395)
Q Consensus 261 ~~~~~P~glalD~~~~rLYwaD~~----------~~~I~~~~~dG~~ 297 (395)
.+......++++++++.|+++... ...|...++++..
T Consensus 214 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 214 DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 333356678888888888877642 3567777766543
No 161
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.18 E-value=0.00044 Score=71.21 Aligned_cols=192 Identities=12% Similarity=0.002 Sum_probs=128.7
Q ss_pred ccCCCCcee------EEEEEeeCC-CCCccEEecCCCCCeEEEEEE----cCCCEEEEEECCCCeEEEEEccCCCCCceE
Q psy13629 99 KLQPDGAYL------LDIRIANLS-RPLKPVTIIKDLEEGAAIDYY----YKKSMVCWTDHGTEMISCCTFDGNNVGSKH 167 (395)
Q Consensus 99 ~~~~~~~~~------~~I~~~~l~-~~~~~~~~~~~~~~~~gl~~d----~~~~~lywsd~~~~~I~~~~~dg~~~~~~~ 167 (395)
..++|+.++ ..|.++|+. .+.+....++.-..|.+++|+ ++++.+|.++...+.|..++..... ...
T Consensus 203 ~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~--~~~ 280 (567)
T 1qks_A 203 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE--PKK 280 (567)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC--EEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc--EEE
Confidence 455665543 268889985 223444444455679999999 6999999999888999988765431 223
Q ss_pred EEEeCC----------CCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEE-EecCCCCceeEEEeCCCCeEEEEe
Q psy13629 168 NVITNG----------LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVL-YWEDIDQPRAIALVPQDSIMFWTD 236 (395)
Q Consensus 168 ~i~~~~----------~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l-~~~~~~~P~~iavdp~~g~LYwtd 236 (395)
++...+ ...+.+|+....+..+|++....++|.+.+........+ .-.....|.++.++|+++++|+++
T Consensus 281 ~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~ 360 (567)
T 1qks_A 281 IQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAA 360 (567)
T ss_dssp EEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEE
T ss_pred EEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEe
Confidence 333221 114567888777778888888899999999876432221 113456799999999999999999
Q ss_pred eCCCCeEEEEecCCCCcceEEEEec--CCcCc-eeEEE-eccccEEEEec-cceeeeeeecccc
Q psy13629 237 WGEVPKIERGAMNGDPRHRKVIVDS--TIFWP-NGIAI-DFNNRLLYWID-GRLTFIEVMDYDG 295 (395)
Q Consensus 237 ~~~~~~I~~~~~dG~~~~~~~lv~~--~~~~P-~glal-D~~~~rLYwaD-~~~~~I~~~~~dG 295 (395)
.+ ..+|..++... ......+.. ...+| .|..+ +...+++|++. ...+.|.+++.+.
T Consensus 361 ~~-sn~V~ViD~~t--~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 361 NA-RNKLVVIDTKE--GKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp GG-GTEEEEEETTT--TEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CC-CCeEEEEECCC--CcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 44 78899999875 222222222 22334 36654 65668887765 3568899998875
No 162
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.18 E-value=8.8e-06 Score=79.39 Aligned_cols=142 Identities=6% Similarity=-0.117 Sum_probs=96.0
Q ss_pred CCEEEEEECCCC----eEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeC---------CCCeEEEEECCC
Q psy13629 140 KSMVCWTDHGTE----MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDS---------ETNKLEVSSLDG 206 (395)
Q Consensus 140 ~~~lywsd~~~~----~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~---------~~~~I~v~~ldg 206 (395)
.+++|+++...+ +|..++.+... ...++... ..| ++++++.++.+|+++. ..+.|.+.|+..
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~--v~~~i~vG--~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T 105 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGV--TLGHSLGA--FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT 105 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTE--EEEEEEEC--TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT
T ss_pred CCeEEEECCccCCccceEEEEECCCCe--EEEEEeCC--CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 467999998777 77788877642 22233332 358 9999999999999983 367899999987
Q ss_pred CceEEEEecC-------CCCceeEEEeCCCCeEEEEeeCCCCeEEE--EecCCCCcceEEEEecCCcCceeEEEeccccE
Q psy13629 207 KKRKVLYWED-------IDQPRAIALVPQDSIMFWTDWGEVPKIER--GAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRL 277 (395)
Q Consensus 207 ~~~~~l~~~~-------~~~P~~iavdp~~g~LYwtd~~~~~~I~~--~~~dG~~~~~~~lv~~~~~~P~glalD~~~~r 277 (395)
.....-+.-. ...|++++++|++++||+++++....|.. ++... ...+- -|.+..+.+.+++
T Consensus 106 ~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~~i~-----v~~~~~~~p~g~~ 176 (368)
T 1mda_H 106 FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQLTK-----SASCFHIHPGAAA 176 (368)
T ss_dssp CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EEEEE-----CSSCCCCEEEETT
T ss_pred CCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ceEEE-----CCCceEEccCCCe
Confidence 6654333211 36799999999999999999765566777 55542 12221 1222334445667
Q ss_pred EEEeccceeeeeeecccc
Q psy13629 278 LYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 278 LYwaD~~~~~I~~~~~dG 295 (395)
+|.+...++++..++++.
T Consensus 177 ~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 177 THYLGSCPASLAASDLAA 194 (368)
T ss_dssp EEECCCCTTSCEEEECCS
T ss_pred EEEEEcCCCCEEEEECcc
Confidence 777776677776666654
No 163
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.16 E-value=4.7e-05 Score=74.54 Aligned_cols=111 Identities=11% Similarity=0.011 Sum_probs=82.3
Q ss_pred EEEcCCCEEEEEECC----CCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeC---------CCCeEEE
Q psy13629 135 DYYYKKSMVCWTDHG----TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDS---------ETNKLEV 201 (395)
Q Consensus 135 ~~d~~~~~lywsd~~----~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~---------~~~~I~v 201 (395)
...+.++++|++|.. .+.|.+++.+... ...++.. ...|. +++++.++.||+++. ..+.|.+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~--v~~~I~v--G~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGR--VIGMIDG--GFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTE--EEEEEEE--CSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCe--EEEEEEC--CCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 346788999999986 6789999887642 1122322 23474 999999999999984 2567999
Q ss_pred EECCCCceEEEEe-cC------CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 202 SSLDGKKRKVLYW-ED------IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 202 ~~ldg~~~~~l~~-~~------~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
.|........-+. .. ...|++++++|+.++||+++......|..+++..
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC
Confidence 9998766543332 21 3589999999999999999854467899999876
No 164
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.15 E-value=0.00036 Score=64.77 Aligned_cols=177 Identities=10% Similarity=-0.008 Sum_probs=115.2
Q ss_pred EEEEeeCCCCCccEEecCC-CCCeEEEEEEcCCCEEEEEECC-CCeEEEEEccCCCCCceEEEEeC-C----CCCcceEE
Q psy13629 109 DIRIANLSRPLKPVTIIKD-LEEGAAIDYYYKKSMVCWTDHG-TEMISCCTFDGNNVGSKHNVITN-G----LITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~-~~~~~gl~~d~~~~~lywsd~~-~~~I~~~~~dg~~~~~~~~i~~~-~----~~~p~glA 181 (395)
.|..++.++ .....+... .....+..+.++++. ++++.. .++|+.++.+|. ........ . ...|.+++
T Consensus 57 ~V~~~d~~G-~~~W~~~~~~~~~~~~~~~~~dG~~-lv~~~~~~~~v~~vd~~Gk---~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 57 GAKMITRDG-RELWNIAAPAGCEMQTARILPDGNA-LVAWCGHPSTILEVNMKGE---VLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp EEEEECTTS-CEEEEEECCTTCEEEEEEECTTSCE-EEEEESTTEEEEEECTTSC---EEEEEEECCSCSSGGGSCSCCE
T ss_pred CEEEECCCC-CEEEEEcCCCCccccccEECCCCCE-EEEecCCCCEEEEEeCCCC---EEEEEeccCCCCcccccccCce
Confidence 567777754 333333222 235667777776654 455555 778888888775 22222221 1 23577888
Q ss_pred EecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecC-CCCcceEEEEe
Q psy13629 182 IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMN-GDPRHRKVIVD 260 (395)
Q Consensus 182 VD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~d-G~~~~~~~lv~ 260 (395)
++. ++++++++...++|..++.+|+..-..- ....|.++++.+ +|.+++++.. ..+|..++.+ | ...-.+-.
T Consensus 132 ~~~-~G~~lv~~~~~~~v~~~d~~G~~~w~~~--~~~~~~~~~~~~-~g~~~v~~~~-~~~v~~~d~~tG--~~~w~~~~ 204 (276)
T 3no2_A 132 KNK-KGNYLVPLFATSEVREIAPNGQLLNSVK--LSGTPFSSAFLD-NGDCLVACGD-AHCFVQLNLESN--RIVRRVNA 204 (276)
T ss_dssp ECT-TSCEEEEETTTTEEEEECTTSCEEEEEE--CSSCCCEEEECT-TSCEEEECBT-TSEEEEECTTTC--CEEEEEEG
T ss_pred ECC-CCCEEEEecCCCEEEEECCCCCEEEEEE--CCCCccceeEcC-CCCEEEEeCC-CCeEEEEeCcCC--cEEEEecC
Confidence 886 6778889999999999999987665554 235799999987 5667777744 5689999998 7 33333322
Q ss_pred c-----CCcCceeEEEeccccEEEEeccc----------eeeeeeecccccee
Q psy13629 261 S-----TIFWPNGIAIDFNNRLLYWIDGR----------LTFIEVMDYDGYVR 298 (395)
Q Consensus 261 ~-----~~~~P~glalD~~~~rLYwaD~~----------~~~I~~~~~dG~~~ 298 (395)
. .+.+|.+++++ .++++|+++.. ..++..++.+|...
T Consensus 205 ~~~~~~~l~~~~~~~~~-~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~ 256 (276)
T 3no2_A 205 NDIEGVQLFFVAQLFPL-QNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVV 256 (276)
T ss_dssp GGSBSCCCSEEEEEEEC-TTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEE
T ss_pred CCCCCccccccccceEc-CCCCEEEEeccCccccccccCCceEEEECCCCCEE
Confidence 2 24569999998 57789999842 23455666666543
No 165
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.15 E-value=0.00024 Score=66.03 Aligned_cols=179 Identities=12% Similarity=-0.037 Sum_probs=116.2
Q ss_pred EEEEEeeCCCCCccEEecCCC-CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCC
Q psy13629 108 LDIRIANLSRPLKPVTIIKDL-EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 186 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~-~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~ 186 (395)
..|.+++.............. ..+..+++++.++.++ + ..+.|+.++.+|. ....+-......+.+.++.+ +
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s--~~~~V~~~d~~G~---~~W~~~~~~~~~~~~~~~~~-d 87 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-S--YSKGAKMITRDGR---ELWNIAAPAGCEMQTARILP-D 87 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-E--CBSEEEEECTTSC---EEEEEECCTTCEEEEEEECT-T
T ss_pred CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-e--CCCCEEEECCCCC---EEEEEcCCCCccccccEECC-C
Confidence 367778873312222222222 3678899998776555 4 3667888888764 22222222122455667765 6
Q ss_pred CeEEEEeCC-CCeEEEEECCCCceEEEEec-C----CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe
Q psy13629 187 EKLYWTDSE-TNKLEVSSLDGKKRKVLYWE-D----IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD 260 (395)
Q Consensus 187 ~~LYwtd~~-~~~I~v~~ldg~~~~~l~~~-~----~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~ 260 (395)
+++++++.. +++|..++.+|+....+-.. . ...|+++++++. |.+++++. ...+|...+.+| ...-. +.
T Consensus 88 G~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~-~~~~v~~~d~~G--~~~w~-~~ 162 (276)
T 3no2_A 88 GNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLF-ATSEVREIAPNG--QLLNS-VK 162 (276)
T ss_dssp SCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEET-TTTEEEEECTTS--CEEEE-EE
T ss_pred CCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC-CCEEEEec-CCCEEEEECCCC--CEEEE-EE
Confidence 777778876 88999999999876554322 1 235788899875 55667774 478899999998 33222 22
Q ss_pred cCCcCceeEEEeccccEEEEeccceeeeeeeccc-cceeee
Q psy13629 261 STIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD-GYVRLV 300 (395)
Q Consensus 261 ~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d-G~~~~~ 300 (395)
. -..|.+.... .++++++++...++|..++.+ |...-+
T Consensus 163 ~-~~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~ 201 (276)
T 3no2_A 163 L-SGTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRR 201 (276)
T ss_dssp C-SSCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEE
T ss_pred C-CCCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEE
Confidence 2 2468888887 567788988888899999988 665544
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.09 E-value=7.9e-05 Score=71.97 Aligned_cols=107 Identities=7% Similarity=0.046 Sum_probs=76.4
Q ss_pred CCCEEEEEECC-----CCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeC---------CCCeEEEEEC
Q psy13629 139 KKSMVCWTDHG-----TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDS---------ETNKLEVSSL 204 (395)
Q Consensus 139 ~~~~lywsd~~-----~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~---------~~~~I~v~~l 204 (395)
..+.+|++|.. ++.|++++.+... ....+.. ...| ++++++.++.||.++. ..+.|.+.++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~---~~~~i~~-g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGK---FLGMVPT-AFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCC---EEEEEEC-CEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCe---EEEEecC-CCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 34679998864 4688888876542 2222222 3467 9999999999999984 2457999998
Q ss_pred CCCceEEEEe-c-----CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 205 DGKKRKVLYW-E-----DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 205 dg~~~~~l~~-~-----~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
.......-+. . ....|.+++++|+.++||+++.+....|..++++.
T Consensus 89 ~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp TTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred cCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 7644432222 1 24679999999999999999865457898888875
No 167
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.02 E-value=0.0014 Score=63.81 Aligned_cols=154 Identities=12% Similarity=0.135 Sum_probs=106.3
Q ss_pred CCeEEEEEE-cC------CCEEEEEECCCCeEEEEEccCCCCCceEEE------------EeCC-----CCCcceEEEec
Q psy13629 129 EEGAAIDYY-YK------KSMVCWTDHGTEMISCCTFDGNNVGSKHNV------------ITNG-----LITPDGLAIDW 184 (395)
Q Consensus 129 ~~~~gl~~d-~~------~~~lywsd~~~~~I~~~~~dg~~~~~~~~i------------~~~~-----~~~p~glAVD~ 184 (395)
.....|.+| .. +..+|.+|.....|.++++.... .++.. ...+ .....|||+++
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~--swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp 229 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQD--SWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGD 229 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTE--EEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCc--EEEEccCCCccccCcceEECCEEeEeccCceEEEecC
Confidence 346778888 22 67899999988889999887642 22211 1111 14678999998
Q ss_pred C----CCeEEEEeCCCCeEEEEE---CC-C---CceEEEEecC-CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC-C
Q psy13629 185 L----TEKLYWTDSETNKLEVSS---LD-G---KKRKVLYWED-IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG-D 251 (395)
Q Consensus 185 ~----~~~LYwtd~~~~~I~v~~---ld-g---~~~~~l~~~~-~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG-~ 251 (395)
. ++.|||.--...++++.. |. . ...+.+-... ..+..++++|+.+|.||+++.. ...|.+.+.++ .
T Consensus 230 ~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~-~~aI~~w~~~~~~ 308 (381)
T 3q6k_A 230 RDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEAN-TKQVSCWNTQKMP 308 (381)
T ss_dssp CCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESS-SSEEEEEETTSCS
T ss_pred CcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEecc-CCeEEEEeCCCCc
Confidence 7 789999998777888876 22 1 1222232222 2455678898889999999955 78899999886 3
Q ss_pred C--cceEEEEec-CCcCceeEEEeccccEEEEecccee
Q psy13629 252 P--RHRKVIVDS-TIFWPNGIAIDFNNRLLYWIDGRLT 286 (395)
Q Consensus 252 ~--~~~~~lv~~-~~~~P~glalD~~~~rLYwaD~~~~ 286 (395)
. .+..+++.. .+.||++|++| .++.||+......
T Consensus 309 ~~~~n~~~l~~d~~l~~pd~~~i~-~~g~Lwv~sn~l~ 345 (381)
T 3q6k_A 309 LRMKNTDVVYTSSRFVFGTDISVD-SKGGLWFMSNGFP 345 (381)
T ss_dssp BCGGGEEEEEECTTCCSEEEEEEC-TTSCEEEEECSCC
T ss_pred cccCceEEEEECCCccccCeEEEC-CCCeEEEEECcch
Confidence 2 244555554 68899999999 4668999885544
No 168
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.98 E-value=0.0012 Score=64.31 Aligned_cols=120 Identities=10% Similarity=0.048 Sum_probs=84.5
Q ss_pred CCcceEEEe-c------CCCeEEEEeCCCCeEEEEECCCCceEEEEe-----c--------C-----CCCceeEEEeCC-
Q psy13629 175 ITPDGLAID-W------LTEKLYWTDSETNKLEVSSLDGKKRKVLYW-----E--------D-----IDQPRAIALVPQ- 228 (395)
Q Consensus 175 ~~p~glAVD-~------~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~-----~--------~-----~~~P~~iavdp~- 228 (395)
...++|+|| - .++.+|.||.....|.|+|+.......+.. + + .....|||++|.
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 356789999 2 257899999999999999998644333331 1 0 235779999998
Q ss_pred ---CCeEEEEeeCCCCeEEEEec----CCCCcceEEEEecCC--cCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 229 ---DSIMFWTDWGEVPKIERGAM----NGDPRHRKVIVDSTI--FWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 229 ---~g~LYwtd~~~~~~I~~~~~----dG~~~~~~~lv~~~~--~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
.+.|||.-.. +.+++++.. +.........+.+.- ....++++|..++.||+++...+.|.+-+.++
T Consensus 232 ~~~~~~LYf~pls-s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 232 SEGNRPAYYLAGS-AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTSCCEEEEEESS-CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCCeEEEEEECC-CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 7899999855 678888874 222122223333332 23446788767899999999999999998886
No 169
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.96 E-value=0.0044 Score=57.09 Aligned_cols=178 Identities=9% Similarity=0.007 Sum_probs=121.4
Q ss_pred EEEEeeCCCCC--ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCC
Q psy13629 109 DIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~~--~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~ 186 (395)
.|++.++.... ...........+.+++|++.++.|+... .++.|..++++.. .....+......+..+++++.+
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTS
T ss_pred cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCC---ceeeeeecccCceEEEEECCCC
Confidence 67888887633 2233444566788999999888777665 6788999998865 3333333345668889998866
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
+.|+ +-...+.|.+.++........+ .....+..++++|....|+.+. ....|...+++. ... .....+...+
T Consensus 196 ~~l~-~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~--~~~~i~~~~~~~--~~~-~~~~~~~~~v 268 (337)
T 1gxr_A 196 TKLW-TGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGM--ESSNVEVLHVNK--PDK-YQLHLHESCV 268 (337)
T ss_dssp SEEE-EEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTS--SCE-EEECCCSSCE
T ss_pred CEEE-EEecCCcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEc--CCCcEEEEECCC--CCe-EEEcCCccce
Confidence 5555 4446789999999877665555 3456689999999888887765 245688888876 333 2333445568
Q ss_pred eeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
..++++++++.|+.+. ..+.|...++.....
T Consensus 269 ~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 269 LSLKFAYCGKWFVSTG-KDNLLNAWRTPYGAS 299 (337)
T ss_dssp EEEEECTTSSEEEEEE-TTSEEEEEETTTCCE
T ss_pred eEEEECCCCCEEEEec-CCCcEEEEECCCCeE
Confidence 8899987777665554 456677766654433
No 170
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.93 E-value=0.004 Score=60.06 Aligned_cols=183 Identities=9% Similarity=-0.068 Sum_probs=124.8
Q ss_pred EEEEeeCCC-CCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSR-PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~-~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
.|++.++.. ......+......+.+++|++.++.|+... .++.|..+++... ............+..+++.+.++
T Consensus 197 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~p~~~ 272 (401)
T 4aez_A 197 AIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG-NDNVVQIWDARSS---IPKFTKTNHNAAVKAVAWCPWQS 272 (401)
T ss_dssp EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTCS---SEEEEECCCSSCCCEEEECTTST
T ss_pred CEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe-CCCeEEEccCCCC---CccEEecCCcceEEEEEECCCCC
Confidence 567777763 233444555677889999999777666554 7789999999864 33333444556788999999888
Q ss_pred eEEEEeC--CCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcC
Q psy13629 188 KLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFW 265 (395)
Q Consensus 188 ~LYwtd~--~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~ 265 (395)
.++.+.. ..+.|.+.++........+ .......+++++|....|+.+.......|...++.............+...
T Consensus 273 ~ll~~~~gs~d~~i~i~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 273 NLLATGGGTMDKQIHFWNAATGARVNTV-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp TEEEEECCTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred CEEEEecCCCCCEEEEEECCCCCEEEEE-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 8888865 6889999999877666555 345678999999988888876523467788888875211111123345556
Q ss_pred ceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 266 PNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 266 P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
...+++++++..|+.+. .++.|..-++....
T Consensus 352 v~~~~~s~dg~~l~s~~-~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 352 VLYSALSPDGRILSTAA-SDENLKFWRVYDGD 382 (401)
T ss_dssp CCEEEECTTSSEEEEEC-TTSEEEEEECCC--
T ss_pred EEEEEECCCCCEEEEEe-CCCcEEEEECCCCc
Confidence 78889987777666554 34666666654433
No 171
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.89 E-value=0.00092 Score=63.92 Aligned_cols=174 Identities=8% Similarity=-0.055 Sum_probs=115.5
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~~~ 187 (395)
.|++.++........+......+.+++|++.+..++.+...++.|...++.... ....+.. .....+..+++.+.++
T Consensus 150 ~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~ 227 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK--PASQIGCSAPGYLPTSLAWHPQQS 227 (344)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS--CEEECC----CCCEEEEEECSSCT
T ss_pred eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc--eeeeeecceeeccceeeeecCCCC
Confidence 688888876333344445567789999999888888888788999999987542 1222211 1223567888888788
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
+++.+-..++.|.+.|+........+.......++++++|.+..+..+- +....|...++.. ........+-...+
T Consensus 228 ~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasg-s~D~~i~vwd~~~---~~~~~~~~H~~~V~ 303 (344)
T 4gqb_B 228 EVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASL-SEDCSLAVLDSSL---SELFRSQAHRDFVR 303 (344)
T ss_dssp TEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEE-ETTSCEEEECTTC---CEEEEECCCSSCEE
T ss_pred cceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEE-eCCCeEEEEECCC---CcEEEEcCCCCCEE
Confidence 8888877789999999976555444435556779999999876555554 3345677777765 22222334555678
Q ss_pred eEEEeccccEEEEeccceeee
Q psy13629 268 GIAIDFNNRLLYWIDGRLTFI 288 (395)
Q Consensus 268 glalD~~~~rLYwaD~~~~~I 288 (395)
++++.+.+++|..+-+.+++|
T Consensus 304 ~v~~sp~~~~llas~s~D~~v 324 (344)
T 4gqb_B 304 DATWSPLNHSLLTTVGWDHQV 324 (344)
T ss_dssp EEEECSSSTTEEEEEETTSCE
T ss_pred EEEEeCCCCeEEEEEcCCCeE
Confidence 888887777666554444444
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.87 E-value=0.00048 Score=71.25 Aligned_cols=185 Identities=9% Similarity=-0.003 Sum_probs=113.6
Q ss_pred EEEEeeCC--CCCccEEecC-----CCCCeEEEEEEcCCCEEEEEECC---------CCeEEEEEccC------CCCCce
Q psy13629 109 DIRIANLS--RPLKPVTIIK-----DLEEGAAIDYYYKKSMVCWTDHG---------TEMISCCTFDG------NNVGSK 166 (395)
Q Consensus 109 ~I~~~~l~--~~~~~~~~~~-----~~~~~~gl~~d~~~~~lywsd~~---------~~~I~~~~~dg------~~~~~~ 166 (395)
.|.+++++ +......+.. ......+++|+++++.|+++... ...|+++++++ . ..
T Consensus 103 ~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~ 179 (662)
T 3azo_A 103 RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS---AV 179 (662)
T ss_dssp CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG---GS
T ss_pred eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC---ce
Confidence 56777776 2023333333 23467789999999999887632 15799999987 4 22
Q ss_pred EEEEeCCCCCcceEEEecCCCeEEEEeCC-------CCeEEEEECCC-C---ceEEEEecCCCCceeEEEeCCCCeEEEE
Q psy13629 167 HNVITNGLITPDGLAIDWLTEKLYWTDSE-------TNKLEVSSLDG-K---KRKVLYWEDIDQPRAIALVPQDSIMFWT 235 (395)
Q Consensus 167 ~~i~~~~~~~p~glAVD~~~~~LYwtd~~-------~~~I~v~~ldg-~---~~~~l~~~~~~~P~~iavdp~~g~LYwt 235 (395)
..+.........++++.+.++.|+|+... ...|.+.++++ . ..+.+.......+..++.+|+++.+|.+
T Consensus 180 ~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 180 RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVAT 259 (662)
T ss_dssp EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEE
T ss_pred eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEE
Confidence 33321333456778899989999988743 25899999984 3 3444543335678899999988755555
Q ss_pred eeCCCCeEEEEecCCCCcceEEEEecCCc--C------ceeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 236 DWGEVPKIERGAMNGDPRHRKVIVDSTIF--W------PNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 236 d~~~~~~I~~~~~dG~~~~~~~lv~~~~~--~------P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
+.....+|++.++++ ...+.+...+.. . ...+++...+..+|.+..+..+|+.+++++...
T Consensus 260 ~~~~~~~l~~~~~~~--~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 260 DRTGWWNLHRVDPAT--GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGEL 328 (662)
T ss_dssp CTTSSCEEEEECTTT--CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEE
T ss_pred CCCCCeEEEEEECCC--CceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcE
Confidence 533445899999865 333444332211 1 234555534444444433445667777765543
No 173
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.87 E-value=0.0023 Score=61.73 Aligned_cols=185 Identities=7% Similarity=-0.084 Sum_probs=122.9
Q ss_pred EEEEeeCCCC-------CccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE--eCCCCCcce
Q psy13629 109 DIRIANLSRP-------LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI--TNGLITPDG 179 (395)
Q Consensus 109 ~I~~~~l~~~-------~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~--~~~~~~p~g 179 (395)
.|++.++... .....+......+.+++|++.++.++++...++.|..++++.. .....+ ......+..
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~ 181 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG---AAVLTLGPDVHPDTIYS 181 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT---EEEEEECTTTCCSCEEE
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC---CccEEEecCCCCCceEE
Confidence 6788887663 2344555567789999999987556666668889999999865 223333 234456788
Q ss_pred EEEecCCCeEEEEeCCCCeEEEEECCCCceEEEE-e-cCCCCceeEEEeCCCCeEEEEee-CCCCeEEEEecCCCCcceE
Q psy13629 180 LAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLY-W-EDIDQPRAIALVPQDSIMFWTDW-GEVPKIERGAMNGDPRHRK 256 (395)
Q Consensus 180 lAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~-~-~~~~~P~~iavdp~~g~LYwtd~-~~~~~I~~~~~dG~~~~~~ 256 (395)
+++++.+..|+ +-...+.|.+.++........+ . .....+..++++|.+.+|+...- +....|...++........
T Consensus 182 ~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~ 260 (402)
T 2aq5_A 182 VDWSRDGALIC-TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLS 260 (402)
T ss_dssp EEECTTSSCEE-EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSE
T ss_pred EEECCCCCEEE-EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCce
Confidence 99988555555 4446789999999876655444 2 22334789999987555544310 2356788888865212122
Q ss_pred EEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 257 VIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 257 ~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
.....+......++++++++.||++....+.|...+++...
T Consensus 261 ~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 261 LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 33223344678899999999999887667788887776544
No 174
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.85 E-value=0.0029 Score=60.42 Aligned_cols=182 Identities=9% Similarity=-0.033 Sum_probs=120.3
Q ss_pred EEEEeeCCCCCccEE----ecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRPLKPVT----IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~----~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|++.++........ .......+.+++|++.++.|.-. ..++.|...++... .....+.........+++.+
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sg-s~d~~i~iwd~~~~---~~~~~~~~h~~~V~~~~~~~ 179 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSG-SKDICIKVWDLAQQ---VVLSSYRAHAAQVTCVAASP 179 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECS
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEE-eCCCeEEEEECCCC---cEEEEEcCcCCceEEEEecC
Confidence 688888876332221 12345678999999988776644 47889999998864 22333333445678899988
Q ss_pred CCCeEEEEeCCCCeEEEEECCCCceEEEEe--cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecC
Q psy13629 185 LTEKLYWTDSETNKLEVSSLDGKKRKVLYW--EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDST 262 (395)
Q Consensus 185 ~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~--~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~ 262 (395)
.+..++.+-...+.|.+.|+........+. .....+..++++|.++.++.+- +....|...++... ..... +..+
T Consensus 180 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg-~~dg~v~~wd~~~~-~~~~~-~~~h 256 (344)
T 4gqb_B 180 HKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG-DENGTVSLVDTKST-SCVLS-SAVH 256 (344)
T ss_dssp SCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE-ETTSEEEEEESCC---CCEE-EECC
T ss_pred CCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe-ccCCcEEEEECCCC-cEEEE-EcCC
Confidence 777888888888999999997665543332 2345678999999888887765 33567888887651 22222 3334
Q ss_pred CcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 263 IFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 263 ~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
....+.+++.+.++++..+-..+++|..-+.....
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 45678888887776665555556667666665443
No 175
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.83 E-value=0.0099 Score=54.69 Aligned_cols=182 Identities=8% Similarity=-0.041 Sum_probs=119.9
Q ss_pred EEEEeeCCCCC---ccEEec--CCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEe
Q psy13629 109 DIRIANLSRPL---KPVTII--KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAID 183 (395)
Q Consensus 109 ~I~~~~l~~~~---~~~~~~--~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD 183 (395)
.|++.++.... ...... .....+..++|++.++.|+... .++.|..++++.... ............+..+++.
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~-~~~~~~~~~~~~i~~~~~~ 150 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG-EASTLSIWDLAAPTP-RIKAELTSSAPACYALAIS 150 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-SSSEEEEEECCCC---EEEEEEECSSSCEEEEEEC
T ss_pred eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEEECCCCCc-ceeeecccCCCceEEEEEC
Confidence 67777776522 122222 4566789999999888777665 678999999987521 1222333444567889998
Q ss_pred cCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCC
Q psy13629 184 WLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTI 263 (395)
Q Consensus 184 ~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~ 263 (395)
+.++.|+... ..+.|.+.++........+......+.+++++|...+|+.+. ....|...++.. ...... ....
T Consensus 151 ~~~~~l~~~~-~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~~~d~~~--~~~~~~-~~~~ 224 (337)
T 1gxr_A 151 PDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG--LDNTVRSWDLRE--GRQLQQ-HDFT 224 (337)
T ss_dssp TTSSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTT--TEEEEE-EECS
T ss_pred CCCCEEEEEe-CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe--cCCcEEEEECCC--CceEee-ecCC
Confidence 8666665444 568899999987766655544566789999999877777654 356788888875 222222 2233
Q ss_pred cCceeEEEeccccEEEEeccceeeeeeeccccceee
Q psy13629 264 FWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRL 299 (395)
Q Consensus 264 ~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~ 299 (395)
..+..+++++.++.|+.+. ..+.|...+++.....
T Consensus 225 ~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKY 259 (337)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEE
T ss_pred CceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeE
Confidence 4578888987777777665 3466777776655443
No 176
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.82 E-value=0.0017 Score=63.56 Aligned_cols=187 Identities=7% Similarity=0.010 Sum_probs=123.0
Q ss_pred EEEEeeCCCCCc-------cEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEE
Q psy13629 109 DIRIANLSRPLK-------PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~~-------~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glA 181 (395)
.|++.++..... ..........+..++|++.++.++.+...++.|..++++..........+......+..|+
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 677777765211 2233455667899999997777888888899999999985421111222334446788999
Q ss_pred EecCCCeEEEEeCCCCeEEEEECCC-CceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc-------
Q psy13629 182 IDWLTEKLYWTDSETNKLEVSSLDG-KKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR------- 253 (395)
Q Consensus 182 VD~~~~~LYwtd~~~~~I~v~~ldg-~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~------- 253 (395)
+.+.++.++++-...+.|.+.++.. ......+........+++++|.+..++.+... ...|...++.....
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~ 363 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDA 363 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET-TSCCEEEEGGGTTCCCCHHHH
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC-CCcEEEEeCCCCccccCcccc
Confidence 9998888888888889999999986 33333333456678999999988787777633 44566666543101
Q ss_pred ----ceEEE-EecCCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 254 ----HRKVI-VDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 254 ----~~~~l-v~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
...+. ...+...+..+++++.+..++.+-...+.|..-+++..
T Consensus 364 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 364 EDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred ccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 12222 22344568899998776646666666677766665543
No 177
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.0037 Score=59.60 Aligned_cols=176 Identities=8% Similarity=-0.088 Sum_probs=117.3
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|+++++........+......+..++|++.++.|+... .++.|..++++... ....+......+..+++.+.+
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~~-- 301 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS-DDGTLRIWHGGNGN---SQNCFYGHSQSIVSASWVGDD-- 301 (425)
T ss_dssp CEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE-TTSCEEEECSSSBS---CSEEECCCSSCEEEEEEETTT--
T ss_pred eEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc-CCCEEEEEECCCCc---cceEecCCCccEEEEEECCCC--
Confidence 677888876444445555667789999999888776655 77889988887642 222333344567888998755
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcc--------------
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRH-------------- 254 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~-------------- 254 (395)
++++-...+.|.+.++........+......+..++++|...+|+.+. ....|...++.. ..
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~i~~~~~--~~~~~~~~~~~~~~~~ 377 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF--MDGQVNVYDLKK--LNSKSRSLYGNRDGIL 377 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE--TTSCEEEEECHH--HHC-------------
T ss_pred EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE--CCCeEEEEECCC--Cccceeeeeccccccc
Confidence 556666788999999987766655545567789999999887777655 245677777764 22
Q ss_pred ------eEEEEecCCc--CceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 255 ------RKVIVDSTIF--WPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 255 ------~~~lv~~~~~--~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
....+..+.. .++.+++++.++.|+.+. ..+.|...+++|
T Consensus 378 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~g 425 (425)
T 1r5m_A 378 NPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY-SLQEGSVVAIPG 425 (425)
T ss_dssp -CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE-SSSCCEEEECCC
T ss_pred CcccchhhhhhcCcccCCceEEEEccCCCceEEEEe-cCceEEEEeecC
Confidence 2222222322 677888887777666554 345565555543
No 178
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.79 E-value=0.0069 Score=56.85 Aligned_cols=178 Identities=8% Similarity=0.001 Sum_probs=117.9
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+.........++|++.++.|... ..++.|..++++.. .....+.........+++.+.++.
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g-~~dg~v~i~~~~~~---~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATG-THVGKVNIFGVESG---KKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEE-CTTSEEEEEETTTC---SEEEEEECSSSCEEEEEECTTSSE
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEE-cCCCcEEEEEcCCC---ceeEEecCCCceEEEEEECCCCCE
Confidence 67888887633344444555667789999988876654 47889999998865 333344444456788999986665
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
|. +-...+.|.+.++........+.......+.++++|...+|.... ....|...++.. ......+..+......
T Consensus 179 la-sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s--~dg~i~iwd~~~--~~~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 179 LA-SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS--DDGYIKIYDVQH--ANLAGTLSGHASWVLN 253 (321)
T ss_dssp EE-EEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC--TTSCEEEEETTT--CCEEEEECCCSSCEEE
T ss_pred EE-EEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc--CCCeEEEEECCC--cceeEEEcCCCCceEE
Confidence 55 445678899999987665555534455678999999777665443 345677778765 3333334445556788
Q ss_pred EEEeccccEEEEeccceeeeeeeccccc
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
+++.+.+..|+-+ ..++.|..-++...
T Consensus 254 ~~~sp~~~~l~s~-s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 254 VAFCPDDTHFVSS-SSDKSVKVWDVGTR 280 (321)
T ss_dssp EEECTTSSEEEEE-ETTSCEEEEETTTT
T ss_pred EEECCCCCEEEEE-eCCCcEEEEeCCCC
Confidence 8888776665544 34556666665443
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.76 E-value=0.0017 Score=61.88 Aligned_cols=183 Identities=9% Similarity=-0.035 Sum_probs=114.3
Q ss_pred EEEEeeCCCCCccEEecCCCCCe-EEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCc--ceEEEecC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEG-AAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP--DGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~-~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p--~glAVD~~ 185 (395)
.|.++++++ .+...+....... .+.+|+++++.|+++. ....|++.++++. ....+........ ...++++.
T Consensus 61 ~l~~~d~~~-g~~~~lt~~~~~~~~~~~~spdg~~l~~~~-~~~~l~~~d~~~g---~~~~~~~~~~~~~~~~~~~~~~d 135 (388)
T 3pe7_A 61 NYYLLDLNT-QVATQLTEGRGDNTFGGFLSPDDDALFYVK-DGRNLMRVDLATL---EENVVYQVPAEWVGYGTWVANSD 135 (388)
T ss_dssp EEEEEETTT-CEEEECCCSSCBCSSSCEECTTSSEEEEEE-TTTEEEEEETTTC---CEEEEEECCTTEEEEEEEEECTT
T ss_pred eEEEEeCCC-CceEEeeeCCCCCccceEEcCCCCEEEEEe-CCCeEEEEECCCC---cceeeeechhhcccccceeECCC
Confidence 477788877 4555555444433 3678999999999998 4578999999875 3333333211111 11233554
Q ss_pred CCeEEEEe---------------------CCCCeEEEEECCCCceEEEEecCCCCceeEEEeC-CCCeEEEEeeCC----
Q psy13629 186 TEKLYWTD---------------------SETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVP-QDSIMFWTDWGE---- 239 (395)
Q Consensus 186 ~~~LYwtd---------------------~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp-~~g~LYwtd~~~---- 239 (395)
+..++... .....|.+.++++...+.+. ........++++| +.++|.++..+.
T Consensus 136 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~ 214 (388)
T 3pe7_A 136 CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLV 214 (388)
T ss_dssp SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTS
T ss_pred CCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCC
Confidence 55554321 23468999999887776666 3445678999999 877776655332
Q ss_pred CCeEEEEecCCCCcceEEEEecCC-cCceeEEEeccccEEEEe-ccce---eeeeeeccccceee
Q psy13629 240 VPKIERGAMNGDPRHRKVIVDSTI-FWPNGIAIDFNNRLLYWI-DGRL---TFIEVMDYDGYVRL 299 (395)
Q Consensus 240 ~~~I~~~~~dG~~~~~~~lv~~~~-~~P~glalD~~~~rLYwa-D~~~---~~I~~~~~dG~~~~ 299 (395)
..+|+.++.+| ...+.+..... ......++.+++++|+++ +... ..|...++++...+
T Consensus 215 ~~~l~~~d~~~--~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 215 DARMWLINEDG--TNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp SCSEEEEETTS--CCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred cceEEEEeCCC--CceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 45899999988 45555444321 124456788888888654 3222 24888888766543
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.76 E-value=0.00048 Score=65.74 Aligned_cols=181 Identities=9% Similarity=-0.055 Sum_probs=112.8
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEc-CCCEEEEEECC-----CCeEEEEEccCCCCCceEEEEeCCC-CCcceE
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYY-KKSMVCWTDHG-----TEMISCCTFDGNNVGSKHNVITNGL-ITPDGL 180 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~-~~~~lywsd~~-----~~~I~~~~~dg~~~~~~~~i~~~~~-~~p~gl 180 (395)
..|.++++.+ .....+.........++|++ ++++|.+.... ...|+.++.++. ....+..... ......
T Consensus 168 ~~l~~~d~~~-g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~~~~~~~~~~ 243 (388)
T 3pe7_A 168 CRLMRVDLKT-GESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT---NMRKVKTHAEGESCTHE 243 (388)
T ss_dssp EEEEEEETTT-CCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC---CCEESCCCCTTEEEEEE
T ss_pred ceEEEEECCC-CceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC---ceEEeeeCCCCcccccc
Confidence 5788888877 45555555556678899999 88888666543 348999998875 2233322211 124456
Q ss_pred EEecCCCeEEEE-eCCC-C--eEEEEECCCCceEEEEecCC-----CCceeEEEeCCCCeEEEEee-------CCCCeEE
Q psy13629 181 AIDWLTEKLYWT-DSET-N--KLEVSSLDGKKRKVLYWEDI-----DQPRAIALVPQDSIMFWTDW-------GEVPKIE 244 (395)
Q Consensus 181 AVD~~~~~LYwt-d~~~-~--~I~v~~ldg~~~~~l~~~~~-----~~P~~iavdp~~g~LYwtd~-------~~~~~I~ 244 (395)
+..+.++.|+++ +... . .|++.++++...+.+..... ..+.+++++|+.+.|+++-. .....|+
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 244 FWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp EECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEE
T ss_pred eECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEE
Confidence 788877778554 3222 2 49999999877665543221 22666789998888887531 2357899
Q ss_pred EEecCCCCcceEEEEecCCc----------CceeEEEeccccEEEEeccc--eeeeeeeccc
Q psy13629 245 RGAMNGDPRHRKVIVDSTIF----------WPNGIAIDFNNRLLYWIDGR--LTFIEVMDYD 294 (395)
Q Consensus 245 ~~~~dG~~~~~~~lv~~~~~----------~P~glalD~~~~rLYwaD~~--~~~I~~~~~d 294 (395)
+.++++ ...+.+...... ....+++.+++++|+++... ...|+.++++
T Consensus 324 ~~d~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 324 VFNMKN--GTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp EEETTT--TEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred EEeccC--CceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 999987 444444443221 24567888888889887532 3345555554
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.75 E-value=0.0014 Score=67.69 Aligned_cols=183 Identities=5% Similarity=-0.122 Sum_probs=112.1
Q ss_pred EEEEeeCCCC-----CccEEec-CCCCCeEEEEEEcCCCEEEEEECCC-------CeEEEEEccCCC-CCceEEEEeCCC
Q psy13629 109 DIRIANLSRP-----LKPVTII-KDLEEGAAIDYYYKKSMVCWTDHGT-------EMISCCTFDGNN-VGSKHNVITNGL 174 (395)
Q Consensus 109 ~I~~~~l~~~-----~~~~~~~-~~~~~~~gl~~d~~~~~lywsd~~~-------~~I~~~~~dg~~-~~~~~~i~~~~~ 174 (395)
+|.++++++. .....+. .......+++|+++++.|+++.... ..|+.++++++. ......+.....
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE 241 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT
T ss_pred EEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC
Confidence 5777888762 3445555 5555677889999999999886432 479999998421 112233333323
Q ss_pred CCcceEEEecCCCeEEEEeCCCC--eEEEEECCCCceEEEEecCCCC--------ceeEEEeCCCCeEEEEeeCCCCeEE
Q psy13629 175 ITPDGLAIDWLTEKLYWTDSETN--KLEVSSLDGKKRKVLYWEDIDQ--------PRAIALVPQDSIMFWTDWGEVPKIE 244 (395)
Q Consensus 175 ~~p~glAVD~~~~~LYwtd~~~~--~I~v~~ldg~~~~~l~~~~~~~--------P~~iavdp~~g~LYwtd~~~~~~I~ 244 (395)
..+..++..+.++ ||++....+ +|++.++++...+.+....... ...+++.|.+..+|.+.. ...+|+
T Consensus 242 ~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 242 EAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLG 319 (662)
T ss_dssp BCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred ceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEE
Confidence 5667788877666 777665445 8999998766655554322111 457888887766666655 678899
Q ss_pred EEecCCCCcceEEEEecCCcCceeE-EEeccccEEEEeccc---eeeeeeecccccee
Q psy13629 245 RGAMNGDPRHRKVIVDSTIFWPNGI-AIDFNNRLLYWIDGR---LTFIEVMDYDGYVR 298 (395)
Q Consensus 245 ~~~~dG~~~~~~~lv~~~~~~P~gl-alD~~~~rLYwaD~~---~~~I~~~~~dG~~~ 298 (395)
++++++ ...+.+ ..+.....++ +.| +++++++-.. ...|+.+++++...
T Consensus 320 ~~d~~~--~~~~~l-~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 320 ILDPES--GELVDA-AGPWTEWAATLTVS--GTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EEETTT--TEEEEC-CSSCCEEEEEEEEE--TTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEECCC--CcEEEe-cCCCCeEEEEEecC--CCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 999886 333333 2222334445 444 6666655332 34677777765543
No 182
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.75 E-value=0.0013 Score=64.39 Aligned_cols=185 Identities=11% Similarity=0.075 Sum_probs=125.3
Q ss_pred EEEEeeCCC----------CCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCce----EEEEeCCC
Q psy13629 109 DIRIANLSR----------PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSK----HNVITNGL 174 (395)
Q Consensus 109 ~I~~~~l~~----------~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~----~~i~~~~~ 174 (395)
.|+++++.. ......+......+.+++|++.+..++.+...++.|..++++....... ........
T Consensus 152 ~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~ 231 (430)
T 2xyi_A 152 DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHT 231 (430)
T ss_dssp CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCS
T ss_pred cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCC
Confidence 466666643 1233344455667899999998874566666889999999886321011 12222334
Q ss_pred CCcceEEEecCCCeEEEEeCCCCeEEEEECCCC---ceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCC
Q psy13629 175 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK---KRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGD 251 (395)
Q Consensus 175 ~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~---~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~ 251 (395)
..+.+++..+.+++++.+....+.|.+.++... .....+......++.|+++|...+++++- +....|...++...
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg-~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATG-SADKTVALWDLRNL 310 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEE-ETTSEEEEEETTCT
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEE-eCCCeEEEEeCCCC
Confidence 568889998878888889888999999999865 22233334556789999999888777776 33567888888752
Q ss_pred CcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 252 PRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 252 ~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
..... .+..+......+++.+.++.++.+-...+.|...++..
T Consensus 311 ~~~~~-~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 311 KLKLH-SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TSCSE-EEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCeE-EeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 12222 23334456888999988877888877777787777654
No 183
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.73 E-value=0.015 Score=54.55 Aligned_cols=164 Identities=9% Similarity=-0.005 Sum_probs=109.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|+++++........+......+.+++|++.++.|.... .++.|..+++... .....+.........+++++.++
T Consensus 145 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~-~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~spd~~- 219 (321)
T 3ow8_A 145 KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA-IDGIINIFDIATG---KLLHTLEGHAMPIRSLTFSPDSQ- 219 (321)
T ss_dssp EEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTT---EEEEEECCCSSCCCEEEECTTSC-
T ss_pred cEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc-CCCeEEEEECCCC---cEEEEEcccCCceeEEEEcCCCC-
Confidence 678888876444444445556788999999888776554 7789999998764 22223333345678999998555
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
+..+-...+.|.+.++........+.........++++|...+|+-+. ....|...++.. ......+..+.....+
T Consensus 220 ~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s--~D~~v~iwd~~~--~~~~~~~~~h~~~v~~ 295 (321)
T 3ow8_A 220 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS--SDKSVKVWDVGT--RTCVHTFFDHQDQVWG 295 (321)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTT--TEEEEEECCCSSCEEE
T ss_pred EEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe--CCCcEEEEeCCC--CEEEEEEcCCCCcEEE
Confidence 445666788999999987766655544556688999999877766543 345677777764 2222223334456778
Q ss_pred EEEeccccEEEEe
Q psy13629 269 IAIDFNNRLLYWI 281 (395)
Q Consensus 269 lalD~~~~rLYwa 281 (395)
+++...+.+|..+
T Consensus 296 v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 296 VKYNGNGSKIVSV 308 (321)
T ss_dssp EEECTTSSEEEEE
T ss_pred EEECCCCCEEEEE
Confidence 8888666655443
No 184
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.73 E-value=0.0011 Score=67.62 Aligned_cols=176 Identities=10% Similarity=-0.036 Sum_probs=114.9
Q ss_pred EEEeeCCCCCccEEecCCC-CCeEEEEEEcCCCEEEEEEC--CCC--eEEEEEc--cCCCCCceEEEEeCCCCCcceEEE
Q psy13629 110 IRIANLSRPLKPVTIIKDL-EEGAAIDYYYKKSMVCWTDH--GTE--MISCCTF--DGNNVGSKHNVITNGLITPDGLAI 182 (395)
Q Consensus 110 I~~~~l~~~~~~~~~~~~~-~~~~gl~~d~~~~~lywsd~--~~~--~I~~~~~--dg~~~~~~~~i~~~~~~~p~glAV 182 (395)
+++.++++ .....+.... ....+++|+++ +.+|+++. +.. .|+.++. +|. . . ...........++
T Consensus 46 ~~lw~~~~-g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~---~-~--~l~~~~~~~~~~~ 117 (582)
T 3o4h_A 46 VNAYLYDG-GETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE---E-Q--RLEAVKPMRILSG 117 (582)
T ss_dssp EEEEEEET-TEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC---C-E--ECTTSCSBEEEEE
T ss_pred eeEEEEcC-CCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc---c-c--cccCCCCceeeee
Confidence 44444555 4444444443 46778889887 78888885 233 6777888 664 2 2 2222334456677
Q ss_pred ecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeC--CCCeEEEEecCCCCcceEEEEe
Q psy13629 183 DWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWG--EVPKIERGAMNGDPRHRKVIVD 260 (395)
Q Consensus 183 D~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~--~~~~I~~~~~dG~~~~~~~lv~ 260 (395)
.+.++.++++....+.+.+.++++...+.+..... ..++++|+.++|+++... ....|++.++++ ...+.+.
T Consensus 118 s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~--g~~~~l~- 191 (582)
T 3o4h_A 118 VDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS--GGLRVFD- 191 (582)
T ss_dssp EECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTT--CCCEEEC-
T ss_pred CCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC--CCceEee-
Confidence 77777766665555556688998887776664332 889999999999876543 225699999887 3444443
Q ss_pred cCCcCceeEEEeccccEEEEeccce-eeeeeeccccceee
Q psy13629 261 STIFWPNGIAIDFNNRLLYWIDGRL-TFIEVMDYDGYVRL 299 (395)
Q Consensus 261 ~~~~~P~glalD~~~~rLYwaD~~~-~~I~~~~~dG~~~~ 299 (395)
.+....+.+++.++++.|+.++... ..|...++++...+
T Consensus 192 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 192 SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 3334568889998999999555332 37888888765544
No 185
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.72 E-value=0.0016 Score=62.72 Aligned_cols=146 Identities=16% Similarity=0.135 Sum_probs=90.8
Q ss_pred CCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC-------eEEEEeCC--CCeEEEEECCCCc-
Q psy13629 139 KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE-------KLYWTDSE--TNKLEVSSLDGKK- 208 (395)
Q Consensus 139 ~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~-------~LYwtd~~--~~~I~v~~ldg~~- 208 (395)
....+.-++ ..+.+..++++|. ..+.+ . ...++++.+-+.-. .+|.++.. .++|.++++|...
T Consensus 39 ~~s~ii~t~-k~~gL~Vydl~G~---~l~~~--~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 39 QNSKLITTN-KKSGLVVYSLDGK---MLHSY--N-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp GGCEEEEEE-TTTEEEEEETTSC---EEEEE--C-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred CccEEEEEc-CCCCEEEEcCCCc---EEEEc--c-CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence 334433344 3456777777664 22222 1 24667776655211 46999998 9999999776332
Q ss_pred -eEEE------EecCCCCceeEEE--eCCCC--eEEEEeeCCCCeEEEEec--CCCCcceEEEEec--CCcCceeEEEec
Q psy13629 209 -RKVL------YWEDIDQPRAIAL--VPQDS--IMFWTDWGEVPKIERGAM--NGDPRHRKVIVDS--TIFWPNGIAIDF 273 (395)
Q Consensus 209 -~~~l------~~~~~~~P~~iav--dp~~g--~LYwtd~~~~~~I~~~~~--dG~~~~~~~lv~~--~~~~P~glalD~ 273 (395)
...+ +...+..|+||++ +|..+ ++|+++- ..+++...+ ++.+.....++.+ --.+|-|+++|.
T Consensus 112 ~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k--~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd 189 (355)
T 3amr_A 112 TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK--EGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADD 189 (355)
T ss_dssp CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS--SSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEET
T ss_pred ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC--CCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcC
Confidence 2233 1244589999999 88777 4777662 356766555 2211111122222 134799999998
Q ss_pred cccEEEEeccceeeeeeeccc
Q psy13629 274 NNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 274 ~~~rLYwaD~~~~~I~~~~~d 294 (395)
..++||+++...+ |++++.+
T Consensus 190 ~~g~Lyv~eEd~G-Iw~~da~ 209 (355)
T 3amr_A 190 EYGRLYIAEEDEA-IWKFSAE 209 (355)
T ss_dssp TTTEEEEEETTTE-EEEEECS
T ss_pred CCCeEEEecccce-EEEEeCC
Confidence 8999999999855 9999854
No 186
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.71 E-value=0.0011 Score=69.48 Aligned_cols=144 Identities=6% Similarity=-0.027 Sum_probs=103.2
Q ss_pred CCCeEEEEEEcCCCEEEEEECCCC-----eEEEEEccCCCCCceEEEEeCCCC------------------------Ccc
Q psy13629 128 LEEGAAIDYYYKKSMVCWTDHGTE-----MISCCTFDGNNVGSKHNVITNGLI------------------------TPD 178 (395)
Q Consensus 128 ~~~~~gl~~d~~~~~lywsd~~~~-----~I~~~~~dg~~~~~~~~i~~~~~~------------------------~p~ 178 (395)
...+..++|+++++.|+++...++ .|+.+++++. ....+...... ...
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG---QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC---CEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC---ceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 345789999999999998876455 8999999875 33333322111 257
Q ss_pred eEEEecCCCeEEEEeCCCCeEEEEECCCC---ceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcce
Q psy13629 179 GLAIDWLTEKLYWTDSETNKLEVSSLDGK---KRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHR 255 (395)
Q Consensus 179 glAVD~~~~~LYwtd~~~~~I~v~~ldg~---~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~ 255 (395)
++++.+.++.|+++.. +.|.+.++++. ..+.+. .....+..++++|++++|+++. ...|+..++++ ...
T Consensus 113 ~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~-~~~~~~~~~~~SPDG~~la~~~---~~~i~~~d~~~--g~~ 184 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLT-HGEGFATDAKLSPKGGFVSFIR---GRNLWVIDLAS--GRQ 184 (741)
T ss_dssp CCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCC-CSSSCEEEEEECTTSSEEEEEE---TTEEEEEETTT--TEE
T ss_pred eeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcc-cCCcccccccCCCCCCEEEEEe---CCcEEEEecCC--CCE
Confidence 8999998899988876 89999999987 554443 3446689999999999888776 34799999987 333
Q ss_pred EEEEecCCc----------------CceeEEEeccccEEEEec
Q psy13629 256 KVIVDSTIF----------------WPNGIAIDFNNRLLYWID 282 (395)
Q Consensus 256 ~~lv~~~~~----------------~P~glalD~~~~rLYwaD 282 (395)
+.+...... .+.++++.+++++|+++.
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 333222111 147789999999898874
No 187
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.67 E-value=0.0012 Score=67.30 Aligned_cols=167 Identities=8% Similarity=-0.056 Sum_probs=104.2
Q ss_pred EEEEeeC--CCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCC
Q psy13629 109 DIRIANL--SRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l--~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~ 186 (395)
.|..+++ ++ ... .+ .........++.+.++.++++....+.+..+++++. ....+..... ..+++++.+
T Consensus 91 ~l~~~~~~~~g-~~~-~l-~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g---~~~~l~~~~~---~~~~~spDG 161 (582)
T 3o4h_A 91 ALFKVNTSRPG-EEQ-RL-EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGG---GLRELARLPG---FGFVSDIRG 161 (582)
T ss_dssp EEEEEETTSTT-CCE-EC-TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETT---EEEEEEEESS---CEEEEEEET
T ss_pred EEEEEeccCCC-ccc-cc-cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCC---cEEEeecCCC---ceEEECCCC
Confidence 4555666 54 222 22 223334456778777766555445555557788765 3333433222 789999999
Q ss_pred CeEEEEeCC---CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCC
Q psy13629 187 EKLYWTDSE---TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTI 263 (395)
Q Consensus 187 ~~LYwtd~~---~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~ 263 (395)
+.|+++... ...|++.++++...+.+. ......+.++++|+++.|+.++......|++.++++ ...+ ++....
T Consensus 162 ~~la~~~~~~~~~~~i~~~d~~~g~~~~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~--~~~~-~~~~~~ 237 (582)
T 3o4h_A 162 DLIAGLGFFGGGRVSLFTSNLSSGGLRVFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD--GSVE-DLELPS 237 (582)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTCCCEEEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT--CCEE-ECCCSC
T ss_pred CEEEEEEEcCCCCeEEEEEcCCCCCceEee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC--CcEE-EccCCC
Confidence 999876532 257999999887777664 444556899999999999966633445899999998 4444 444433
Q ss_pred cCceeEE--------EeccccEEEEeccceeeee
Q psy13629 264 FWPNGIA--------IDFNNRLLYWIDGRLTFIE 289 (395)
Q Consensus 264 ~~P~gla--------lD~~~~rLYwaD~~~~~I~ 289 (395)
..+.+++ +++++ ++|++-...+++.
T Consensus 238 ~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~ 270 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDG-RLAVVARREGRSA 270 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEE
T ss_pred cChhhhhhccccceeEcCCC-cEEEEEEcCCcEE
Confidence 3344445 77666 6666544334443
No 188
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.66 E-value=0.0016 Score=68.19 Aligned_cols=190 Identities=13% Similarity=0.171 Sum_probs=116.2
Q ss_pred cccCCCCcee-----EEEEEeeCCCCCccEEecCCCCC-----------------eEEEEEEcCCCEEEEEECCCC----
Q psy13629 98 EKLQPDGAYL-----LDIRIANLSRPLKPVTIIKDLEE-----------------GAAIDYYYKKSMVCWTDHGTE---- 151 (395)
Q Consensus 98 ~~~~~~~~~~-----~~I~~~~l~~~~~~~~~~~~~~~-----------------~~gl~~d~~~~~lywsd~~~~---- 151 (395)
..-+||+.++ ..|.++++++ .....+...... +.+++|+++++.|+++.....
T Consensus 157 ~~~SPDG~~la~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~ 235 (741)
T 2ecf_A 157 AKLSPKGGFVSFIRGRNLWVIDLAS-GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPV 235 (741)
T ss_dssp EEECTTSSEEEEEETTEEEEEETTT-TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCE
T ss_pred ccCCCCCCEEEEEeCCcEEEEecCC-CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCce
Confidence 4556675543 2688888876 444333332222 467999999998888743221
Q ss_pred ----------------------------eEEEEEccC-CCCCceEEEEeC--CCCCcceEEEecCCCeEEEEeC----CC
Q psy13629 152 ----------------------------MISCCTFDG-NNVGSKHNVITN--GLITPDGLAIDWLTEKLYWTDS----ET 196 (395)
Q Consensus 152 ----------------------------~I~~~~~dg-~~~~~~~~i~~~--~~~~p~glAVD~~~~~LYwtd~----~~ 196 (395)
.|+.+++++ . ....+... ....+..++. +.++.|+++.. ..
T Consensus 236 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~ 311 (741)
T 2ecf_A 236 QKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA---QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKK 311 (741)
T ss_dssp EEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC---CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSE
T ss_pred EecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC---ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCe
Confidence 566667665 4 22222221 2234567888 88888887753 34
Q ss_pred CeEEEEECCCCceEEEEecCCC----CceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeE-EE
Q psy13629 197 NKLEVSSLDGKKRKVLYWEDID----QPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGI-AI 271 (395)
Q Consensus 197 ~~I~v~~ldg~~~~~l~~~~~~----~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~gl-al 271 (395)
..|.+.++++.....++..... ...+++++|+++.+|.++.....+|++.+.+| . .+.+.. +-.....+ .+
T Consensus 312 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~--~-~~~l~~-~~~~v~~~~~~ 387 (741)
T 2ecf_A 312 LDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG--K-AAALTH-GNWSVDELLAV 387 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS--C-EEESCC-SSSCEEEEEEE
T ss_pred EEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC--C-eeeeee-cceEEEeEeEE
Confidence 5799999988776666543221 34688999987755544433456899998887 4 333332 22223455 48
Q ss_pred eccccEEEEeccc----eeeeeeeccccc
Q psy13629 272 DFNNRLLYWIDGR----LTFIEVMDYDGY 296 (395)
Q Consensus 272 D~~~~rLYwaD~~----~~~I~~~~~dG~ 296 (395)
+.++++||++-.. ..+|+.++.+|.
T Consensus 388 s~dg~~l~~~~~~~~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 388 DEKAGLAYFRAGIESARESQIYAVPLQGG 416 (741)
T ss_dssp ETTTTEEEEEECSSCTTCBEEEEEETTCC
T ss_pred eCCCCEEEEEEeCCCCceEEEEEEEcCCC
Confidence 8888888876443 345777777665
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.66 E-value=0.0036 Score=59.46 Aligned_cols=184 Identities=8% Similarity=-0.046 Sum_probs=112.6
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEc-CCCEEEEEECC-C----CeEEEEEccCCCCCceEEEEeCC-CCCcceE
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYY-KKSMVCWTDHG-T----EMISCCTFDGNNVGSKHNVITNG-LITPDGL 180 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~-~~~~lywsd~~-~----~~I~~~~~dg~~~~~~~~i~~~~-~~~p~gl 180 (395)
..|.++++.+ .....+.........++|++ .+++|++.... . ..|+.+++++. ....+.... ...+..+
T Consensus 168 ~~l~~~d~~~-g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 168 CRLIKVDIET-GELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS---NVRKIKEHAEGESCTHE 243 (396)
T ss_dssp EEEEEEETTT-CCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC---CCEESSCCCTTEEEEEE
T ss_pred ceEEEEECCC-CcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC---ceeEeeccCCCccccce
Confidence 4778888876 44444555556678889999 67767665432 2 47999999875 223332211 2245667
Q ss_pred EEecCCCeEEEEeC--CCCe--EEEEECCCCceEEEEecCCCCceeEEEeC-CCCeEEEEee--------------CCCC
Q psy13629 181 AIDWLTEKLYWTDS--ETNK--LEVSSLDGKKRKVLYWEDIDQPRAIALVP-QDSIMFWTDW--------------GEVP 241 (395)
Q Consensus 181 AVD~~~~~LYwtd~--~~~~--I~v~~ldg~~~~~l~~~~~~~P~~iavdp-~~g~LYwtd~--------------~~~~ 241 (395)
++.+.++.|+++.. .... |.+.++++...+.+.... ... ++++| ++..|+.+.. ....
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 88887887877742 2334 999999876665554222 122 78888 6665554321 1246
Q ss_pred eEEEEecCCCCcceEEEEecCCc----------CceeEEEeccccEEEEeccc--eeeeeeeccccceeee
Q psy13629 242 KIERGAMNGDPRHRKVIVDSTIF----------WPNGIAIDFNNRLLYWIDGR--LTFIEVMDYDGYVRLV 300 (395)
Q Consensus 242 ~I~~~~~dG~~~~~~~lv~~~~~----------~P~glalD~~~~rLYwaD~~--~~~I~~~~~dG~~~~~ 300 (395)
.|++.++++ ...+.+...... .+..+++++++++|+++... ...|+.+++++....+
T Consensus 321 ~i~~~d~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 321 FLYVLNTKA--KSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHL 389 (396)
T ss_dssp EEEEEETTT--TBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC--
T ss_pred cEEEEeccc--CceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccccc
Confidence 899999987 333344333221 14456788888888887543 3457777777765544
No 190
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.65 E-value=0.0018 Score=67.40 Aligned_cols=161 Identities=11% Similarity=0.083 Sum_probs=104.1
Q ss_pred eEEEEEEcCCCEEEEEEC--------------------------------CCCeEEEEEccCCCCCceEEEEeC--CCCC
Q psy13629 131 GAAIDYYYKKSMVCWTDH--------------------------------GTEMISCCTFDGNNVGSKHNVITN--GLIT 176 (395)
Q Consensus 131 ~~gl~~d~~~~~lywsd~--------------------------------~~~~I~~~~~dg~~~~~~~~i~~~--~~~~ 176 (395)
+.+++|+++++.|+++.. ....|+.+++++. ....+... .-..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~---~~~~~~~~~~~~~~ 259 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG---KTVYLQTGEPKEKF 259 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT---EEEECCCCSCTTCE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC---ceEeeccCCCCcee
Confidence 478999999999988751 2356888888765 22222211 1134
Q ss_pred cceEEEecCCCeEEEEeCCC----CeEEEEECCCC-ceEEEEecC-C---CCceeEEEeC--CCCeEEEEeeCCCCeEEE
Q psy13629 177 PDGLAIDWLTEKLYWTDSET----NKLEVSSLDGK-KRKVLYWED-I---DQPRAIALVP--QDSIMFWTDWGEVPKIER 245 (395)
Q Consensus 177 p~glAVD~~~~~LYwtd~~~----~~I~v~~ldg~-~~~~l~~~~-~---~~P~~iavdp--~~g~LYwtd~~~~~~I~~ 245 (395)
+..++..+.++.|+++.... ..|.+.++++. ..+.+.... . ....+++++| ++++||.++.....+|+.
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYL 339 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEE
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEE
Confidence 56788888888888864322 48899999876 555554221 1 1236789999 777776665445678888
Q ss_pred EecCCCCcceEEEEecCCcCcee-EEEeccccEEEEecccee----eeeeeccccce
Q psy13629 246 GAMNGDPRHRKVIVDSTIFWPNG-IAIDFNNRLLYWIDGRLT----FIEVMDYDGYV 297 (395)
Q Consensus 246 ~~~dG~~~~~~~lv~~~~~~P~g-lalD~~~~rLYwaD~~~~----~I~~~~~dG~~ 297 (395)
++.+| ...+.+.. +...... ++++.++++||++....+ .|+.++.++..
T Consensus 340 ~~~~~--~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 340 YDTTG--RLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp EETTS--CEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred EECCC--CEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 88777 43444432 2112233 788988889998876544 78888876644
No 191
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.63 E-value=0.0016 Score=62.22 Aligned_cols=179 Identities=8% Similarity=-0.064 Sum_probs=114.6
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~~~ 187 (395)
.|++.++........+......+.+++|.+.++.++.+...++.|...++..... ...+.. .....+..+++.+.++
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP--ATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC--BCBCCCTTCCSCEEEEEECTTST
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce--eeeeeeccccccccchhhhhccc
Confidence 6788888763333444445677899999998877788877888999888765421 111111 1223467788888778
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
+++.+-...+.|.+.++........+.......++++++|..+.+..+- +....|...+++. . +..-...+-...+
T Consensus 240 ~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasg-s~D~~i~iwd~~~--~-~~~~~~~H~~~V~ 315 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASI-SEDCTVAVLDADF--S-EVFRDLSHRDFVT 315 (357)
T ss_dssp TEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEE-ETTSCEEEECTTS--C-EEEEECCCSSCEE
T ss_pred ceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEE-eCCCEEEEEECCC--C-cEeEECCCCCCEE
Confidence 8877777788999999877655544434456678999999876655544 3346677788775 2 2222223445678
Q ss_pred eEEEeccccEEEEeccceeeeeeecc
Q psy13629 268 GIAIDFNNRLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 268 glalD~~~~rLYwaD~~~~~I~~~~~ 293 (395)
++++.+.+++++.+-..+++|..-++
T Consensus 316 ~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 316 GVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred EEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 88887644444444444455544333
No 192
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.62 E-value=0.021 Score=57.32 Aligned_cols=176 Identities=10% Similarity=0.100 Sum_probs=119.6
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.+..+ .....+......+.+++|++.++.|.... .++.|..++.++. .............++++.+.++.
T Consensus 367 ~v~~~~~~~-~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~d~~v~~~~~~~~----~~~~~~~~~~~v~~~~~s~d~~~ 440 (577)
T 2ymu_A 367 TVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQ----LLQTLTGHSSSVWGVAFSPDDQT 440 (577)
T ss_dssp EEEEEETTC-CEEEEEECCSSCEEEEEECTTSSCEEEEE-TTSEEEEECTTCC----EEEEEECCSSCEEEEEECTTSSE
T ss_pred EEEEEcCCC-CEEEEecCCCCCeEEEEECCCCCEEEEEe-CCCEEEEEeCCCC----EEEEecCCCCCeEEEEECCCCCE
Confidence 567777655 33444455567789999999888776554 6788888887764 22333344456788999886665
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
|. +-...+.|.+.++++.....+. .......+++++|+..+|..+. ....|...+.+| ...+.+ ..+....+.
T Consensus 441 l~-~~~~d~~v~~w~~~~~~~~~~~-~~~~~v~~~~~spd~~~las~~--~d~~i~iw~~~~--~~~~~~-~~h~~~v~~ 513 (577)
T 2ymu_A 441 IA-SASDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASAS--DDKTVKLWNRNG--QLLQTL-TGHSSSVRG 513 (577)
T ss_dssp EE-EEETTSEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSCEEEEEE--TTSEEEEEETTS--CEEEEE-ECCSSCEEE
T ss_pred EE-EEcCCCEEEEEECCCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEe--CCCEEEEEcCCC--CEEEEE-eCCCCCEEE
Confidence 54 4456789999999887766665 4456789999999877776554 346677788887 333333 334456788
Q ss_pred EEEeccccEEEEeccceeeeeeecccccee
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
+++.++++.|..+. .++.|..-+.+|...
T Consensus 514 l~~s~dg~~l~s~~-~dg~v~lwd~~~~~~ 542 (577)
T 2ymu_A 514 VAFSPDGQTIASAS-DDKTVKLWNRNGQLL 542 (577)
T ss_dssp EEECTTSSCEEEEE-TTSEEEEECTTSCEE
T ss_pred EEEcCCCCEEEEEE-CcCEEEEEeCCCCEE
Confidence 99987777666554 346677767766543
No 193
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.62 E-value=0.024 Score=54.44 Aligned_cols=179 Identities=8% Similarity=-0.032 Sum_probs=118.5
Q ss_pred EEEEeeCCCCCccEEe-cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTI-IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~-~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
.|++.++......... ......+.+++|++.++.|+... .++.|..++++.. .....+.........++.+ +
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~-~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~---~ 186 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL-GNGLVDIYDVESQ---TKLRTMAGHQARVGCLSWN---R 186 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTC---CEEEEECCCSSCEEEEEEE---T
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC-CCCeEEEEECcCC---eEEEEecCCCCceEEEEEC---C
Confidence 7888888763332222 22466789999999888777665 6788999998765 2233333334455666653 3
Q ss_pred eEEEEeCCCCeEEEEECCC-CceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 188 KLYWTDSETNKLEVSSLDG-KKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg-~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
++.++-...+.|.+.++.. ......+........+++++|...+|+.+. ....|...++.. .........+....
T Consensus 187 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~--~~~~~~~~~~~~~v 262 (401)
T 4aez_A 187 HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGG--NDNVVQIWDARS--SIPKFTKTNHNAAV 262 (401)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTC--SSEEEEECCCSSCC
T ss_pred CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEe--CCCeEEEccCCC--CCccEEecCCcceE
Confidence 4555666789999999983 443444445567789999999776666554 245688888875 33333344455577
Q ss_pred eeEEEeccccEEEEecc--ceeeeeeecccccee
Q psy13629 267 NGIAIDFNNRLLYWIDG--RLTFIEVMDYDGYVR 298 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~--~~~~I~~~~~dG~~~ 298 (395)
..+++.+.+..++.+-. ..+.|...+++....
T Consensus 263 ~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 263 KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp CEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred EEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 88999987777877754 567787777655443
No 194
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.59 E-value=0.018 Score=54.65 Aligned_cols=182 Identities=11% Similarity=-0.016 Sum_probs=118.1
Q ss_pred EEEEeeCCCCCccEEec--CCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCC--CCCcceEEEec
Q psy13629 109 DIRIANLSRPLKPVTII--KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG--LITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~--~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~--~~~p~glAVD~ 184 (395)
.|++.++.......... .....+.+++|++.++.++++...++.|...++++. ....+.... ...+..+++.+
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS---VIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC---EEEEEECCCCSSCCEEEEEEET
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC---ceEEEeccCCCCCCeEEEEECC
Confidence 68888887633333332 366788999999955555566668899999999874 333333222 24578999998
Q ss_pred CCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc-ceEEEEecCC
Q psy13629 185 LTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR-HRKVIVDSTI 263 (395)
Q Consensus 185 ~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~-~~~~lv~~~~ 263 (395)
.+..|+ +-...+.|.+.++++.....+. .......+++++|....++++- +....|...++..... ........+.
T Consensus 174 ~~~~l~-~~~~d~~i~i~d~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~ 250 (383)
T 3ei3_B 174 SRQMLA-TGDSTGRLLLLGLDGHEIFKEK-LHKAKVTHAEFNPRCDWLMATS-SVDATVKLWDLRNIKDKNSYIAEMPHE 250 (383)
T ss_dssp TTTEEE-EEETTSEEEEEETTSCEEEEEE-CSSSCEEEEEECSSCTTEEEEE-ETTSEEEEEEGGGCCSTTCEEEEEECS
T ss_pred CCCEEE-EECCCCCEEEEECCCCEEEEec-cCCCcEEEEEECCCCCCEEEEE-eCCCEEEEEeCCCCCcccceEEEecCC
Confidence 666665 4446789999999877655554 4567789999999887455554 3356677777763111 1111112345
Q ss_pred cCceeEEEec-cccEEEEeccceeeeeeeccccce
Q psy13629 264 FWPNGIAIDF-NNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 264 ~~P~glalD~-~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
.....+++++ .+..|+.+. ..+.|...+++...
T Consensus 251 ~~v~~~~~s~~~~~~l~~~~-~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 251 KPVNAAYFNPTDSTKLLTTD-QRNEIRVYSSYDWS 284 (383)
T ss_dssp SCEEEEEECTTTSCEEEEEE-SSSEEEEEETTBTT
T ss_pred CceEEEEEcCCCCCEEEEEc-CCCcEEEEECCCCc
Confidence 5788899997 666665554 45677777765433
No 195
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.0019 Score=61.96 Aligned_cols=182 Identities=9% Similarity=0.010 Sum_probs=115.9
Q ss_pred EEEEeeCCCCC------ccEEe---cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCC------
Q psy13629 109 DIRIANLSRPL------KPVTI---IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG------ 173 (395)
Q Consensus 109 ~I~~~~l~~~~------~~~~~---~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~------ 173 (395)
.|++.++.... ..... ......+.+++|++.++.++++...++.|..++++.. .....+...
T Consensus 137 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~ 213 (416)
T 2pm9_A 137 EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK---KEVIHLSYTSPNSGI 213 (416)
T ss_dssp CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT---EEEEEECCCCCSSCC
T ss_pred eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC---CcceEEecccccccc
Confidence 67778876633 11111 2345678899999986667777778899999999875 222222222
Q ss_pred CCCcceEEEecCCCeEEEEeCCCC---eEEEEECCCC-ceEEEEe-cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEec
Q psy13629 174 LITPDGLAIDWLTEKLYWTDSETN---KLEVSSLDGK-KRKVLYW-EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAM 248 (395)
Q Consensus 174 ~~~p~glAVD~~~~~LYwtd~~~~---~I~v~~ldg~-~~~~l~~-~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~ 248 (395)
...+..+++.+.++.++++-...+ .|.+.++... .....+. .....+.+++++|..+.++++- +....|...++
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~-~~dg~v~~wd~ 292 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS-GRDNTVLLWNP 292 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEE-ESSSEEEEECS
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEE-eCCCCEEEeeC
Confidence 456888999987666666665666 8999999864 3323332 2345678999999444444443 23567888887
Q ss_pred CCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 249 NGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 249 dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
.. ......+..+-.....+++.+++.+++.+-...+.|..-++...
T Consensus 293 ~~--~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 293 ES--AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp SS--CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred CC--CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 75 23333334445567888998776456666555666766665543
No 196
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.57 E-value=0.045 Score=50.29 Aligned_cols=180 Identities=8% Similarity=-0.044 Sum_probs=116.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.+++|++.++.|+... .++.|..++++.. .....+.........+++.+.++.
T Consensus 46 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ 121 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS-DDKTLKIWDVSSG---KCLKTLKGHSNYVFCCNFNPQSNL 121 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTC---CEEEEEECCSSCEEEEEECSSSSE
T ss_pred eEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC-CCCEEEEEECCCC---cEEEEEcCCCCCEEEEEEcCCCCE
Confidence 567777755333344445566788999999887776554 7889999998865 233334444556778899886655
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
|+ +-...+.|.+.++........+.........++++|...+|+.+.. ...|...++... .....+...+......
T Consensus 122 l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~wd~~~~-~~~~~~~~~~~~~~~~ 197 (312)
T 4ery_A 122 IV-SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY--DGLCRIWDTASG-QCLKTLIDDDNPPVSF 197 (312)
T ss_dssp EE-EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTC-CEEEEECCSSCCCEEE
T ss_pred EE-EEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEECCCC-ceeeEEeccCCCceEE
Confidence 55 5556788999999876655555344556789999997777766542 456777777641 2223333333334566
Q ss_pred EEEeccccEEEEeccceeeeeeeccccce
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
+++++.++.|..+. ..+.|...++....
T Consensus 198 ~~~~~~~~~l~~~~-~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 198 VKFSPNGKYILAAT-LDNTLKLWDYSKGK 225 (312)
T ss_dssp EEECTTSSEEEEEE-TTTEEEEEETTTTE
T ss_pred EEECCCCCEEEEEc-CCCeEEEEECCCCc
Confidence 78887776666554 34666666665443
No 197
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.0096 Score=58.38 Aligned_cols=160 Identities=9% Similarity=-0.025 Sum_probs=107.6
Q ss_pred CeEEEEEEcCCCEEEEEECCCCeEEEEEcc--CCCCCceEEEEe-CCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCC
Q psy13629 130 EGAAIDYYYKKSMVCWTDHGTEMISCCTFD--GNNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 206 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~~~~~I~~~~~d--g~~~~~~~~i~~-~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg 206 (395)
.+.+++|++.++.|+.+...++.|..++++ +.. ....+.. .....+.++++++.+..|+.++. .+.|.+.++..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~ 180 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINS 180 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS--CEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTS
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc--eeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCC
Confidence 588999999999988888788999999987 432 2233221 23356789999997778877764 68899998865
Q ss_pred CceEE----EEecCCCCceeEEEeCC---CCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEE
Q psy13629 207 KKRKV----LYWEDIDQPRAIALVPQ---DSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLY 279 (395)
Q Consensus 207 ~~~~~----l~~~~~~~P~~iavdp~---~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLY 279 (395)
..... .+.........++++|. +.+|+.+.. ...|...++... .....+...+...+..+++. +++.|+
T Consensus 181 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~--d~~i~vwd~~~~-~~~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 181 IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR--DEHIKISHYPQC-FIVDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET--TSCEEEEEESCT-TCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC--CCcEEEEECCCC-ceeeeeecCCCCceEEEEEC-CCCEEE
Confidence 44321 22233467889999998 556655542 456777777641 23333344455678889998 666666
Q ss_pred Eeccceeeeeeeccccce
Q psy13629 280 WIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 280 waD~~~~~I~~~~~dG~~ 297 (395)
.+. .++.|...++....
T Consensus 257 s~~-~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 257 SAG-GDDKIFAWDWKTGK 273 (450)
T ss_dssp EEE-SSSEEEEEETTTCC
T ss_pred EEe-CCCeEEEEECCCCc
Confidence 554 56778777765544
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.51 E-value=0.01 Score=55.46 Aligned_cols=169 Identities=11% Similarity=0.019 Sum_probs=107.7
Q ss_pred ceeEEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECC----CCeEEEEEccCCCCCceEEEEeCCCCCcceE
Q psy13629 105 AYLLDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHG----TEMISCCTFDGNNVGSKHNVITNGLITPDGL 180 (395)
Q Consensus 105 ~~~~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~----~~~I~~~~~dg~~~~~~~~i~~~~~~~p~gl 180 (395)
.+...|.++++++ .....+ .....+.|+++++.|++.... ...|+.+++++. ....+.... . ..++
T Consensus 40 ~~~~~l~~~d~~~-~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g---~~~~l~~~~-~-~~~~ 109 (347)
T 2gop_A 40 KYENTIVIENLKN-NARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL---SSKKILEAK-N-IRSL 109 (347)
T ss_dssp EEEEEEEEEETTT-CCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT---EEEEEEEES-E-EEEE
T ss_pred CccceEEEEeCCC-CceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC---ceEEEEcCC-C-ccce
Confidence 4567788888877 333333 567788999999988887543 235888888875 333333322 2 7788
Q ss_pred EEecCCCeEEEEeCC--------------------------CCeEEEEECCCCce-EEEEecCCCCceeEEEeCCCCeEE
Q psy13629 181 AIDWLTEKLYWTDSE--------------------------TNKLEVSSLDGKKR-KVLYWEDIDQPRAIALVPQDSIMF 233 (395)
Q Consensus 181 AVD~~~~~LYwtd~~--------------------------~~~I~v~~ldg~~~-~~l~~~~~~~P~~iavdp~~g~LY 233 (395)
+..+.++.|+++... ...|.+.++++... +.+.. . ....++++|++ .+|
T Consensus 110 ~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 110 EWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVV 185 (347)
T ss_dssp EECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEE
T ss_pred eECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEE
Confidence 888878888887521 35799999988776 55543 2 77889999977 666
Q ss_pred EEeeCC-------CCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccc-------eeeeeeeccccc
Q psy13629 234 WTDWGE-------VPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGR-------LTFIEVMDYDGY 296 (395)
Q Consensus 234 wtd~~~-------~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~-------~~~I~~~~~dG~ 296 (395)
.+.... ...|+.++ .| ..+.+... ..... +++++++|+++... ...|...+ .|.
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d-~~---~~~~l~~~--~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~ 253 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE-DG---KEEKMFEK--VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD-GKE 253 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE-TT---EEEEEEEE--ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC-SSC
T ss_pred EEecccccccccccccEEEeC-CC---ceEEeccC--cceee--ECCCCCEEEEEEccccCCccccceEEEEC-CCc
Confidence 664331 34688888 54 33333332 22222 26677778776422 34677777 444
No 199
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.50 E-value=0.028 Score=56.33 Aligned_cols=178 Identities=10% Similarity=0.090 Sum_probs=120.7
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++.+ .....+......+.+++|++.++.|.... .++.|...+.++. ....+......+.++++.+.++.
T Consensus 326 ~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~v~~~~~~~~----~~~~~~~~~~~v~~~~~s~dg~~ 399 (577)
T 2ymu_A 326 TVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASAS-DDKTVKLWNRNGQ----LLQTLTGHSSSVRGVAFSPDGQT 399 (577)
T ss_dssp CEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTCC----EEEEEECCSSCEEEEEECTTSSC
T ss_pred eEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEcCCCC----EEEEecCCCCCeEEEEECCCCCE
Confidence 567777766 44445555667789999999888776554 6788888887764 22333444567889999986666
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
|.. -...+.|.+.+.++.....+. ..-....+++++|++.+|..+. ....|...++++ .....+ ..+-.....
T Consensus 400 l~~-~~~d~~v~~~~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~~--~d~~v~~w~~~~--~~~~~~-~~~~~~v~~ 472 (577)
T 2ymu_A 400 IAS-ASDDKTVKLWNRNGQLLQTLT-GHSSSVWGVAFSPDDQTIASAS--DDKTVKLWNRNG--QLLQTL-TGHSSSVRG 472 (577)
T ss_dssp EEE-EETTSEEEEECTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTS--CEEEEE-ECCSSCEEE
T ss_pred EEE-EeCCCEEEEEeCCCCEEEEec-CCCCCeEEEEECCCCCEEEEEc--CCCEEEEEECCC--CEEEEE-cCCCCCEEE
Confidence 654 445688999999887766655 4456678999999888776554 345677788877 333333 334446788
Q ss_pred EEEeccccEEEEeccceeeeeeeccccceeee
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
++++++++.|..+. ..+.|..-+.+|.....
T Consensus 473 ~~~spd~~~las~~-~d~~i~iw~~~~~~~~~ 503 (577)
T 2ymu_A 473 VAFSPDGQTIASAS-DDKTVKLWNRNGQLLQT 503 (577)
T ss_dssp EEECTTSCEEEEEE-TTSEEEEEETTSCEEEE
T ss_pred EEEcCCCCEEEEEe-CCCEEEEEcCCCCEEEE
Confidence 99987777666554 34566666666654443
No 200
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.50 E-value=0.0006 Score=64.97 Aligned_cols=182 Identities=10% Similarity=0.008 Sum_probs=107.6
Q ss_pred EEEEeeCCCCCccEEecCCCCCeE-EEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCC-CCcce--EE---
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGA-AIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-ITPDG--LA--- 181 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~-gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~-~~p~g--lA--- 181 (395)
.|.++++++ .+...+........ ++.|+++++.|+++.. .+.|+++++++. ....+..... ..|.| |+
T Consensus 61 ~l~~~d~~~-~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~-~~~l~~~d~~~~---~~~~~~~~~~~~~~~g~~l~~~~ 135 (396)
T 3c5m_A 61 NYYLLNLET-QQAVQLTEGKGDNTFGGFISTDERAFFYVKN-ELNLMKVDLETL---EEQVIYTVDEEWKGYGTWVANSD 135 (396)
T ss_dssp EEEEEETTT-TEEEECCCSSCBCTTTCEECTTSSEEEEEET-TTEEEEEETTTC---CEEEEEECCTTEEEEEEEEECTT
T ss_pred eEEEEECCC-CcEEEeecCCCCccccceECCCCCEEEEEEc-CCcEEEEECCCC---CcEEEEecccccCCCCCEEEecc
Confidence 567778776 44444433333323 3779999999988873 457999999875 3333333111 11221 11
Q ss_pred -------------EecCCCeEEEEe----CCCCeEEEEECCCCceEEEEecCCCCceeEEEeC-CCCeEEEEeeCCC---
Q psy13629 182 -------------IDWLTEKLYWTD----SETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVP-QDSIMFWTDWGEV--- 240 (395)
Q Consensus 182 -------------VD~~~~~LYwtd----~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp-~~g~LYwtd~~~~--- 240 (395)
+.+.++.+++.. .....|.+.++++...+.+. ........++++| .+++|+++.-+..
T Consensus 136 ~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~ 214 (396)
T 3c5m_A 136 CTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLV 214 (396)
T ss_dssp SSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSC
T ss_pred CCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCC
Confidence 112222333322 34567899999887666655 4455678899999 5666666542322
Q ss_pred -CeEEEEecCCCCcceEEEEecC-CcCceeEEEeccccEEEEeccc--e--eeeeeecccccee
Q psy13629 241 -PKIERGAMNGDPRHRKVIVDST-IFWPNGIAIDFNNRLLYWIDGR--L--TFIEVMDYDGYVR 298 (395)
Q Consensus 241 -~~I~~~~~dG~~~~~~~lv~~~-~~~P~glalD~~~~rLYwaD~~--~--~~I~~~~~dG~~~ 298 (395)
.+|+.++.+| ...+.+.... ...+..+++++++++|+++... . ..|...++++...
T Consensus 215 ~~~l~~~d~~~--~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 215 DARMWLVNEDG--SNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp SCCCEEEETTS--CCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE
T ss_pred CceEEEEECCC--CceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe
Confidence 5799999987 4444444321 2246667888888888777322 2 3488888765443
No 201
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.49 E-value=0.00091 Score=68.12 Aligned_cols=111 Identities=16% Similarity=0.107 Sum_probs=80.8
Q ss_pred CCCCeEEEEEEcCCCEEEEEECC---------------------CCeEEEEEccCCCC----CceEEEEeC---------
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHG---------------------TEMISCCTFDGNNV----GSKHNVITN--------- 172 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~---------------------~~~I~~~~~dg~~~----~~~~~i~~~--------- 172 (395)
...++.++++++.++.||++=.+ .+.|+++..++... ...+.++..
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 34579999999999999998321 26799998865321 112333321
Q ss_pred ------------CCCCcceEEEecCCCeEEE-EeCC-----------CCeEEEEECCCCceEEEEe-cCCCCceeEEEeC
Q psy13629 173 ------------GLITPDGLAIDWLTEKLYW-TDSE-----------TNKLEVSSLDGKKRKVLYW-EDIDQPRAIALVP 227 (395)
Q Consensus 173 ------------~~~~p~glAVD~~~~~LYw-td~~-----------~~~I~v~~ldg~~~~~l~~-~~~~~P~~iavdp 227 (395)
.+++|.+|++|. .|.||+ ||.. ++.+++++.+....+.++. .....|+|++++|
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP 540 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred cccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC
Confidence 368899999997 689999 8853 4489999986555555553 3467899999999
Q ss_pred CCCeEEEEeeC
Q psy13629 228 QDSIMFWTDWG 238 (395)
Q Consensus 228 ~~g~LYwtd~~ 238 (395)
+.+.||++-..
T Consensus 541 D~ktLfV~vQH 551 (592)
T 4a9v_A 541 DQKTLFVGIQH 551 (592)
T ss_dssp TSSEEEEEEES
T ss_pred CCCEEEEEEeC
Confidence 99999998754
No 202
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.49 E-value=0.0023 Score=61.33 Aligned_cols=190 Identities=10% Similarity=0.008 Sum_probs=118.5
Q ss_pred EEEEeeCCC----CCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCc---eEEEE---eCCCCCcc
Q psy13629 109 DIRIANLSR----PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGS---KHNVI---TNGLITPD 178 (395)
Q Consensus 109 ~I~~~~l~~----~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~---~~~i~---~~~~~~p~ 178 (395)
.|++.++.. ......+......+..++|++.++.++.+...++.|..++++...... ..... ......+.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 577777765 123334444566789999999845566666678899999887642000 11111 12335678
Q ss_pred eEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecC------CCCceeEEEeCCCCeEEEEeeCC--CCeEEEEecCC
Q psy13629 179 GLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWED------IDQPRAIALVPQDSIMFWTDWGE--VPKIERGAMNG 250 (395)
Q Consensus 179 glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~------~~~P~~iavdp~~g~LYwtd~~~--~~~I~~~~~dG 250 (395)
++++.+.++.++++-...+.|.+.++........+... ......++++|.++.++++-..+ ...|...++..
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 89999876777778778899999999887666555333 56689999999876555554232 12677777765
Q ss_pred CCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 251 DPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 251 ~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
.......+...+......+++.+.+++++.+-...+.|...+++....
T Consensus 250 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 250 ANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ 297 (416)
T ss_dssp TTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE
T ss_pred CCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc
Confidence 211122221134446788888873444555555567787777655433
No 203
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.48 E-value=0.018 Score=55.22 Aligned_cols=184 Identities=5% Similarity=-0.107 Sum_probs=116.5
Q ss_pred EEEEeeCCCCCc----cEEecCCCCCeEEEEEEc-CCCEEEEEECCCCeEEEEEccCCCCC----ceEEEEeCCCCCcce
Q psy13629 109 DIRIANLSRPLK----PVTIIKDLEEGAAIDYYY-KKSMVCWTDHGTEMISCCTFDGNNVG----SKHNVITNGLITPDG 179 (395)
Q Consensus 109 ~I~~~~l~~~~~----~~~~~~~~~~~~gl~~d~-~~~~lywsd~~~~~I~~~~~dg~~~~----~~~~i~~~~~~~p~g 179 (395)
.|++++++.... ...+......+.+++|++ .++. +.+...++.|..++++..... .....+......+..
T Consensus 58 ~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~-l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~ 136 (402)
T 2aq5_A 58 AFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNV-IASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGI 136 (402)
T ss_dssp CEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTE-EEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEE
T ss_pred EEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCE-EEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEE
Confidence 677777754221 222334566789999999 5554 455557899999998764210 112233344567888
Q ss_pred EEEecCCCeEEEEeCCCCeEEEEECCCCceEEEE--ecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEE
Q psy13629 180 LAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLY--WEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKV 257 (395)
Q Consensus 180 lAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~--~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~ 257 (395)
+++.+.+++++++-...+.|.+.++........+ .........++++|...+|+.+. ....|...++... .....
T Consensus 137 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~-~~~~~ 213 (402)
T 2aq5_A 137 VAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC--RDKRVRVIEPRKG-TVVAE 213 (402)
T ss_dssp EEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE--TTSEEEEEETTTT-EEEEE
T ss_pred EEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe--cCCcEEEEeCCCC-ceeee
Confidence 9999876667777777889999999877665555 33456789999999777776655 2467888888651 22222
Q ss_pred EEecCCc-CceeEEEeccccEEEEec--cceeeeeeeccccc
Q psy13629 258 IVDSTIF-WPNGIAIDFNNRLLYWID--GRLTFIEVMDYDGY 296 (395)
Q Consensus 258 lv~~~~~-~P~glalD~~~~rLYwaD--~~~~~I~~~~~dG~ 296 (395)
+...+.. .+..+++..++..|+.+- ...+.|...+++..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 214 KDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp EECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBC
T ss_pred eccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccc
Confidence 2122222 367788886655444431 45667777776553
No 204
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.46 E-value=0.016 Score=54.94 Aligned_cols=162 Identities=9% Similarity=-0.010 Sum_probs=110.7
Q ss_pred CCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe--CCCCCcceEEEecCCCeEEEEeCCCCeEEEEE
Q psy13629 126 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT--NGLITPDGLAIDWLTEKLYWTDSETNKLEVSS 203 (395)
Q Consensus 126 ~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~--~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ 203 (395)
.....+.+++|++.+..++.+...++.|..+++++.. ...... .....+.++++.+.++++.++-...+.|.+.+
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN---KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT---CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc---cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 3446789999999883445555578899999998652 233332 23456778888875556666666789999999
Q ss_pred CCCCceEEEEecC--CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEe
Q psy13629 204 LDGKKRKVLYWED--IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWI 281 (395)
Q Consensus 204 ldg~~~~~l~~~~--~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwa 281 (395)
+.+.....+.... ......++++|...+|+... ....|...++++ .... .+..+......+++++.+..++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~~~--~~~~-~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 148 FSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD--STGRLLLLGLDG--HEIF-KEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp TTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE--TTSEEEEEETTS--CEEE-EEECSSSCEEEEEECSSCTTEEEE
T ss_pred CCCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC--CCCCEEEEECCC--CEEE-EeccCCCcEEEEEECCCCCCEEEE
Confidence 9986665555322 25588999999888776655 356788888876 3333 333455678889998777645555
Q ss_pred ccceeeeeeecccc
Q psy13629 282 DGRLTFIEVMDYDG 295 (395)
Q Consensus 282 D~~~~~I~~~~~dG 295 (395)
-..++.|...++..
T Consensus 223 ~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 223 SSVDATVKLWDLRN 236 (383)
T ss_dssp EETTSEEEEEEGGG
T ss_pred EeCCCEEEEEeCCC
Confidence 55567777777654
No 205
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.45 E-value=0.004 Score=59.46 Aligned_cols=183 Identities=7% Similarity=-0.023 Sum_probs=113.4
Q ss_pred EEEEeeCCCCCcc----EEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRPLKP----VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~----~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|++.++...... .........+.+++|++.++.|.-.. .++.|...++... .....+.........+++.+
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs-~dg~v~iwd~~~~---~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG-KDFSVKVWDLSQK---AVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE-TTSCEEEEETTTT---EEEEEECCCSSCEEEEEECT
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe-CCCeEEEEECCCC---cEEEEEcCCCCCEEEEEEcc
Confidence 5666666542111 11223456689999999888776544 7888999998764 22333334456678899988
Q ss_pred CCCeEEEEeCCCCeEEEEECCCCceEEEEe--cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecC
Q psy13629 185 LTEKLYWTDSETNKLEVSSLDGKKRKVLYW--EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDST 262 (395)
Q Consensus 185 ~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~--~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~ 262 (395)
.++.++.+....+.|.+.++........+. .....+..++++|.++.++.+- +....|...++.. ......+..+
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g-~~d~~i~~wd~~~--~~~~~~~~~~ 268 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG-DETGNVSLVNIKN--PDSAQTSAVH 268 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE-ESSSCEEEEESSC--GGGCEEECCC
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe-ecccceeEEECCC--CcEeEEEecc
Confidence 777777888788899999987654433221 2234578999999888777654 2345677777765 2222223333
Q ss_pred CcCceeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 263 IFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 263 ~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
....+.+++.+.++++..+-..+++|..-+.+....
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV 304 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 445678888877766555545556777767665443
No 206
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.39 E-value=0.0015 Score=66.45 Aligned_cols=107 Identities=9% Similarity=0.052 Sum_probs=76.5
Q ss_pred CCCcceEEEecCCCeEEEEeCC---------------------CCeEEEEECCCCc-------eEEEEec----------
Q psy13629 174 LITPDGLAIDWLTEKLYWTDSE---------------------TNKLEVSSLDGKK-------RKVLYWE---------- 215 (395)
Q Consensus 174 ~~~p~glAVD~~~~~LYwtd~~---------------------~~~I~v~~ldg~~-------~~~l~~~---------- 215 (395)
+.+|+++++++.++.+|++-.+ .++|.+...++.. -..++..
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 4589999999999999999522 3789999876532 1222211
Q ss_pred -----------CCCCceeEEEeCCCCeEEE-EeeC----------CCCeEEEEecCCCCcceEEEEe-cCCcCceeEEEe
Q psy13629 216 -----------DIDQPRAIALVPQDSIMFW-TDWG----------EVPKIERGAMNGDPRHRKVIVD-STIFWPNGIAID 272 (395)
Q Consensus 216 -----------~~~~P~~iavdp~~g~LYw-td~~----------~~~~I~~~~~dG~~~~~~~lv~-~~~~~P~glalD 272 (395)
.+..|.+|++|+ .|.||+ ||-+ ....+++++.+. ...+.++. .....|+|+++.
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t--Gel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT--GEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTT--CCEEEEEECCTTCEEEEEEEC
T ss_pred ccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCC--CeEEEEEeCCCCccccCCEEC
Confidence 268899999998 578888 8843 134799998854 23333443 334579999999
Q ss_pred ccccEEEEecc
Q psy13629 273 FNNRLLYWIDG 283 (395)
Q Consensus 273 ~~~~rLYwaD~ 283 (395)
++++.||++-.
T Consensus 540 PD~ktLfV~vQ 550 (592)
T 4a9v_A 540 PDQKTLFVGIQ 550 (592)
T ss_dssp TTSSEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 99999999853
No 207
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.37 E-value=0.0085 Score=62.25 Aligned_cols=183 Identities=11% Similarity=0.076 Sum_probs=116.7
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccC-----CCCCceEEEEeCCCC--------
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDG-----NNVGSKHNVITNGLI-------- 175 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg-----~~~~~~~~i~~~~~~-------- 175 (395)
.|+++++.+ .....+......+..++|+++++.|+++. ++.|+..++++ . ....+......
T Consensus 102 ~i~~~d~~~-~~~~~l~~~~~~~~~~~~SpdG~~la~~~--~~~i~v~~~~~~~~~~g---~~~~~~~~~~~~~~~g~~~ 175 (706)
T 2z3z_A 102 GLVGFDMLA-RKVTYLFDTNEETASLDFSPVGDRVAYVR--NHNLYIARGGKLGEGMS---RAIAVTIDGTETLVYGQAV 175 (706)
T ss_dssp EEEEEETTT-TEEEEEECCTTCCTTCEECTTSSEEEEEE--TTEEEEEECBCTTSCCC---CCEESCSCCBTTEEESSCC
T ss_pred EEEEEECCC-CceEEccCCcccccCCcCCCCCCEEEEEE--CCeEEEEecCcccccCC---CcEEeccCCCCCeEcccch
Confidence 788888876 45445555555677889999999998864 57899999886 4 22222222211
Q ss_pred ------CcceEEEecCCCeEEEEeC--------------------------------CCCeEEEEECCCCceEEEEec--
Q psy13629 176 ------TPDGLAIDWLTEKLYWTDS--------------------------------ETNKLEVSSLDGKKRKVLYWE-- 215 (395)
Q Consensus 176 ------~p~glAVD~~~~~LYwtd~--------------------------------~~~~I~v~~ldg~~~~~l~~~-- 215 (395)
.+.+++..+.++.|+++.. ...+|.+.++++.....+...
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 2588999998888888751 346799999988765544321
Q ss_pred CCCCceeEEEeCCCCeEEEEeeCC---CCeEEEEecCCCCcceEEEEec-CCcC---ceeEEEec--cccEEEEecc-ce
Q psy13629 216 DIDQPRAIALVPQDSIMFWTDWGE---VPKIERGAMNGDPRHRKVIVDS-TIFW---PNGIAIDF--NNRLLYWIDG-RL 285 (395)
Q Consensus 216 ~~~~P~~iavdp~~g~LYwtd~~~---~~~I~~~~~dG~~~~~~~lv~~-~~~~---P~glalD~--~~~rLYwaD~-~~ 285 (395)
....+..++++|++++|+++.... ...|...+.++. ...+.+... ...+ .+++++.+ +++.||.++. +.
T Consensus 256 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 256 KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG-RFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC-CEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC-ceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 123467899999999898865331 247888888762 133344322 2111 25678876 6665655543 23
Q ss_pred eeeeeecccccee
Q psy13629 286 TFIEVMDYDGYVR 298 (395)
Q Consensus 286 ~~I~~~~~dG~~~ 298 (395)
.+|+.++.+|...
T Consensus 335 ~~l~~~~~~~~~~ 347 (706)
T 2z3z_A 335 NHLYLYDTTGRLI 347 (706)
T ss_dssp CEEEEEETTSCEE
T ss_pred cEEEEEECCCCEE
Confidence 5666666655443
No 208
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.36 E-value=0.039 Score=51.58 Aligned_cols=182 Identities=9% Similarity=0.029 Sum_probs=113.9
Q ss_pred EEEEeeCCCCC--ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE-eCCCCCcceEEEecC
Q psy13629 109 DIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-TNGLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~--~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~-~~~~~~p~glAVD~~ 185 (395)
.|++++++... ....+......+.+++|++.++.|+... .++.|..++++... ...... ......+..+++.+.
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRT--WKPTLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTE--EEEEEECCCCSSCEEEEEECTT
T ss_pred EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCe--eeeeEEeecCCCceeEEEECCC
Confidence 67788876632 3344445667789999999888777665 67889999887641 112222 233456788999886
Q ss_pred CCeEEEEeCCCCeEEEEECCCCce----EEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCC----------
Q psy13629 186 TEKLYWTDSETNKLEVSSLDGKKR----KVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGD---------- 251 (395)
Q Consensus 186 ~~~LYwtd~~~~~I~v~~ldg~~~----~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~---------- 251 (395)
++.|+.+. ..+.|.+.+++.... ..+.........+++++|...+|+.... ...|...++...
T Consensus 108 ~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~ 184 (372)
T 1k8k_C 108 EKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC--DFKCRIFSAYIKEVEERPAPTP 184 (372)
T ss_dssp SSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET--TSCEEEEECCCTTTSCCCCCBT
T ss_pred CCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC--CCCEEEEEcccccccccccccc
Confidence 66666554 567888888877652 2222223567899999997777665542 345666664210
Q ss_pred ------CcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 252 ------PRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 252 ------~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
.......+..+......+++++.+..|+.+. ..+.|...+++...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 185 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADADKKM 235 (372)
T ss_dssp TBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGGTT
T ss_pred cccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc
Confidence 0122222223445678899987777666655 45677777765433
No 209
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.36 E-value=0.063 Score=49.72 Aligned_cols=157 Identities=11% Similarity=-0.044 Sum_probs=105.3
Q ss_pred CeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCce
Q psy13629 130 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR 209 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~ 209 (395)
.+..++|++.++.|+... .++.|..+++.... .....+......+.++++++.+..|+ +-...+.|.+.++.....
T Consensus 177 ~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGH-KDGKISKYDVSNNY--EYVDSIDLHEKSISDMQFSPDLTYFI-TSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp CEEEEEECGGGCEEEEEE-TTSEEEEEETTTTT--EEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCE
T ss_pred ceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCc--EeEEEEecCCCceeEEEECCCCCEEE-EecCCceEEEEECCCCce
Confidence 789999999888877665 67899999998631 33334444456788999998665555 445678999999987766
Q ss_pred EEEEecCCCCceeEEEeCCCCeEEEEeeCCCC------------eEEEEecCCCCcceEEEEecCCcCceeEEEeccccE
Q psy13629 210 KVLYWEDIDQPRAIALVPQDSIMFWTDWGEVP------------KIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRL 277 (395)
Q Consensus 210 ~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~------------~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~r 277 (395)
...+ ........++++|...+++.+...... .|...+... ......+..+......+++.++++.
T Consensus 253 ~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~v~~~~~s~~~~~ 329 (369)
T 3zwl_B 253 LKKY-ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF--EEEIGRVQGHFGPLNTVAISPQGTS 329 (369)
T ss_dssp EEEE-ECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT--CCEEEEEECCSSCEEEEEECTTSSE
T ss_pred eeee-cCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC--CcchhheecccCcEEEEEECCCCCE
Confidence 6555 355678899999999988887633211 566666654 2333334445556778888876665
Q ss_pred EEEeccceeeeeeeccc
Q psy13629 278 LYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 278 LYwaD~~~~~I~~~~~d 294 (395)
|..+. .++.|..-+++
T Consensus 330 l~s~~-~dg~v~iw~~~ 345 (369)
T 3zwl_B 330 YASGG-EDGFIRLHHFE 345 (369)
T ss_dssp EEEEE-TTSEEEEEEEC
T ss_pred EEEEc-CCCeEEEEECc
Confidence 55443 34455444443
No 210
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.35 E-value=0.0068 Score=66.50 Aligned_cols=164 Identities=10% Similarity=0.023 Sum_probs=114.6
Q ss_pred EEEEeeCCCCCccEEecCCCC-CeEEEEEEcCCCEEEEEECCCCeEE-EEEccCCCCCceEEEEeCCCCCcceEEEecCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLE-EGAAIDYYYKKSMVCWTDHGTEMIS-CCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~-~~~gl~~d~~~~~lywsd~~~~~I~-~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~ 186 (395)
.|.++++.+ .....+..... .+.+++|+ +++.|++... ...|+ .+++++. ....+. .....+..+++.+.+
T Consensus 318 ~i~~~~~~~-~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~---~~~~l~-~~~~~~~~~~~SpDG 390 (1045)
T 1k32_A 318 QAFIQDVSG-TYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTG---KAEKFE-ENLGNVFAMGVDRNG 390 (1045)
T ss_dssp EEEEECTTS-SBEEECSCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTC---CEEECC-CCCCSEEEEEECTTS
T ss_pred EEEEEcCCC-CceEEccCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCC---CceEec-CCccceeeeEECCCC
Confidence 566677665 33333444444 67788888 7777877764 66888 8888875 333333 444567899999988
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCC--------CCeEEEEecCCCCcceEEE
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGE--------VPKIERGAMNGDPRHRKVI 258 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~--------~~~I~~~~~dG~~~~~~~l 258 (395)
+.|+++.. .+.|.+.++++.....+.........+++++|+.++|.++.... ...|+..++++ .. ...
T Consensus 391 ~~la~~~~-~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~--g~-~~~ 466 (1045)
T 1k32_A 391 KFAVVAND-RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG--RK-IFA 466 (1045)
T ss_dssp SEEEEEET-TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT--TE-EEE
T ss_pred CEEEEECC-CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC--Cc-EEE
Confidence 88887764 56899999988777666644445568999999999898876421 25799999887 33 333
Q ss_pred EecCCcCceeEEEeccccEEEEecc
Q psy13629 259 VDSTIFWPNGIAIDFNNRLLYWIDG 283 (395)
Q Consensus 259 v~~~~~~P~glalD~~~~rLYwaD~ 283 (395)
+..+...+..+++++++++|||+..
T Consensus 467 l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 467 ATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CSCSSSBEEEEEECTTSCEEEEEES
T ss_pred eeCCCcccCCceEcCCCCEEEEEec
Confidence 3344455777889989999999864
No 211
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.35 E-value=0.092 Score=48.34 Aligned_cols=183 Identities=9% Similarity=-0.009 Sum_probs=112.3
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+.........++|.+.++.|+... .++.|...+++.. .....+.........+++.+.+..
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~ 111 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-DDFRIRVFNYNTG---EKVVDFEAHPDYIRSIAVHPTKPY 111 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-TTSEEEEEETTTC---CEEEEEECCSSCEEEEEECSSSSE
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEEC-CCCEEEEEECCCC---cEEEEEeCCCCcEEEEEEcCCCCE
Confidence 678888876333334444556678999999888776554 7889999998865 333334444566889999986555
Q ss_pred EEEEeCCCCeEEEEECCCCce-EEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 189 LYWTDSETNKLEVSSLDGKKR-KVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~-~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
| .+-...+.|.+.++..... ...+.........++++|.++.++.+- +....|...++... .....+...+....+
T Consensus 112 l-~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg-s~D~~v~iwd~~~~-~~~~~~~~~~~~~v~ 188 (304)
T 2ynn_A 112 V-LSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG-CLDRTVKVWSLGQS-TPNFTLTTGQERGVN 188 (304)
T ss_dssp E-EEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE-ETTSEEEEEETTCS-SCSEEEECCCTTCEE
T ss_pred E-EEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE-eCCCeEEEEECCCC-CccceeccCCcCcEE
Confidence 4 5666788999999876533 334434456678999999766655554 33566777777542 222233222222334
Q ss_pred eEEEecc-ccEEEEeccceeeeeeecccccee
Q psy13629 268 GIAIDFN-NRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 268 glalD~~-~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
.+.+.+. ++.+..+-...+.|..-++.....
T Consensus 189 ~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (304)
T ss_dssp EEEECCSTTCCEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc
Confidence 4444432 333444444556666666654433
No 212
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.34 E-value=0.072 Score=55.85 Aligned_cols=179 Identities=9% Similarity=-0.002 Sum_probs=116.6
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.+++|++.++.|.... .++.|..++++.. ............+..+++.+.+..
T Consensus 36 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~ 111 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-DDFRIRVFNYNTG---EKVVDFEAHPDYIRSIAVHPTKPY 111 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-TTSEEEEEETTTC---CEEEEEECCSSCEEEEEECSSSSE
T ss_pred EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe-CCCeEEEEECCCC---cEEEEEecCCCCEEEEEEeCCCCE
Confidence 678888766334444555667789999999998888776 6889999998865 333344445567889999987777
Q ss_pred EEEEeCCCCeEEEEECCCC-ceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 189 LYWTDSETNKLEVSSLDGK-KRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~-~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
|+.+. ..+.|.+.++++. .....+.........++++|.++.++++- +....|...++++. .....+........+
T Consensus 112 l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~dg~v~vwd~~~~-~~~~~~~~~~~~~v~ 188 (814)
T 3mkq_A 112 VLSGS-DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG-CLDRTVKVWSLGQS-TPNFTLTTGQERGVN 188 (814)
T ss_dssp EEEEE-TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE-ETTSEEEEEETTCS-SCSEEEECCCTTCCC
T ss_pred EEEEc-CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE-eCCCeEEEEECCCC-cceeEEecCCCCCEE
Confidence 76444 5789999999876 44444444556789999999555555554 23567888888652 233333333334566
Q ss_pred eEEEec--cccEEEEeccceeeeeeecccc
Q psy13629 268 GIAIDF--NNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 268 glalD~--~~~rLYwaD~~~~~I~~~~~dG 295 (395)
.+++.+ .+..|+.+. ..+.|...++..
T Consensus 189 ~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~ 217 (814)
T 3mkq_A 189 YVDYYPLPDKPYMITAS-DDLTIKIWDYQT 217 (814)
T ss_dssp EEEECCSTTCCEEEEEC-TTSEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEe-CCCEEEEEECCC
Confidence 677765 444444443 345565555443
No 213
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.33 E-value=0.072 Score=48.84 Aligned_cols=160 Identities=7% Similarity=-0.019 Sum_probs=106.7
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCC
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 206 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg 206 (395)
....+.+++|++.++.|.... .++.|...+.... .....+.........+++.+.++.|+ +-...+.|.+.++..
T Consensus 22 h~~~v~~~~~s~~~~~l~s~~-~dg~i~iw~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 22 HTKAVSSVKFSPNGEWLASSS-ADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSNLLV-SASDDKTLKIWDVSS 96 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTT
T ss_pred cCCcEEEEEECCCCCEEEEee-CCCeEEEEeCCCc---ccchhhccCCCceEEEEEcCCCCEEE-EECCCCEEEEEECCC
Confidence 446688999999888766554 7788988888654 33344444455678899998665555 555678999999987
Q ss_pred CceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEecccee
Q psy13629 207 KKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLT 286 (395)
Q Consensus 207 ~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~ 286 (395)
......+.........++++|...+|+... ....|...++.. ......+..+......+++++.+..|+.+. ..+
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~ 171 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGS--FDESVRIWDVKT--GKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-YDG 171 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEE--TTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTS
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEe--CCCcEEEEECCC--CEEEEEecCCCCcEEEEEEcCCCCEEEEEe-CCC
Confidence 766555545566788999999887776654 245677788765 222223333334567788886666555554 456
Q ss_pred eeeeeccccc
Q psy13629 287 FIEVMDYDGY 296 (395)
Q Consensus 287 ~I~~~~~dG~ 296 (395)
.|...++...
T Consensus 172 ~i~~wd~~~~ 181 (312)
T 4ery_A 172 LCRIWDTASG 181 (312)
T ss_dssp CEEEEETTTC
T ss_pred cEEEEECCCC
Confidence 6666665443
No 214
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.32 E-value=0.049 Score=57.10 Aligned_cols=179 Identities=9% Similarity=-0.030 Sum_probs=119.8
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+..++|++.++.|..+. .++.|..+++++.. ............+..+++.+..+.
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENNW--ALEQTFEGHEHFVMCVAFNPKDPS 154 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-TTSEEEEEEGGGTS--EEEEEEECCSSCEEEEEEETTEEE
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc-CCCEEEEEECCCCc--eEEEEEcCCCCcEEEEEEEcCCCC
Confidence 678888876444445555677899999999998887655 78899999988642 223344444556788998875666
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecC-CCCceeEEEeC--CCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcC
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWED-IDQPRAIALVP--QDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFW 265 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~-~~~P~~iavdp--~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~ 265 (395)
++++-...+.|.+.++.+......+... ......++++| ...+|+... ....|...++.. ......+..+...
T Consensus 155 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~i~~~d~~~--~~~~~~~~~~~~~ 230 (814)
T 3mkq_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS--DDLTIKIWDYQT--KSCVATLEGHMSN 230 (814)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC--TTSEEEEEETTT--TEEEEEEECCSSC
T ss_pred EEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe--CCCEEEEEECCC--CcEEEEEcCCCCC
Confidence 6667767899999999765544433333 36788899998 666666544 356788888765 3333333444556
Q ss_pred ceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 266 PNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 266 P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
...+++.+.+..|+.+. ..+.|...+...
T Consensus 231 v~~~~~~~~~~~l~~~~-~dg~v~vwd~~~ 259 (814)
T 3mkq_A 231 VSFAVFHPTLPIIISGS-EDGTLKIWNSST 259 (814)
T ss_dssp EEEEEECSSSSEEEEEE-TTSCEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEe-CCCeEEEEECCC
Confidence 77888887666555443 345666666554
No 215
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.29 E-value=0.047 Score=52.89 Aligned_cols=179 Identities=10% Similarity=0.037 Sum_probs=115.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++.+......+......+.+++|++.++.|+ +...++.|...++... .....+.........++.++ .+.
T Consensus 173 ~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~-s~s~D~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~~~-~g~ 247 (410)
T 1vyh_C 173 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIV-SASRDKTIKMWEVQTG---YCVKTFTGHREWVRMVRPNQ-DGT 247 (410)
T ss_dssp CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECT-TSS
T ss_pred eEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEE-EEeCCCeEEEEECCCC---cEEEEEeCCCccEEEEEECC-CCC
Confidence 567777765222223334556789999999887765 4447899999998764 22333344445567788876 455
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCC-------------------CeEEEEeeCCCCeEEEEecC
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQD-------------------SIMFWTDWGEVPKIERGAMN 249 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~-------------------g~LYwtd~~~~~~I~~~~~d 249 (395)
+.++-...+.|.+.++........+.........++++|.. +.+.++- +....|...++.
T Consensus 248 ~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg-s~D~~i~iwd~~ 326 (410)
T 1vyh_C 248 LIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG-SRDKTIKMWDVS 326 (410)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE-ETTSEEEEEETT
T ss_pred EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE-eCCCeEEEEECC
Confidence 56676678899999998777665554555667888888853 3344554 335678888876
Q ss_pred CCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 250 GDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 250 G~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
. ......+..+..+..++++++.+..|+.+ ..++.|..-++...
T Consensus 327 ~--~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 327 T--GMCLMTLVGHDNWVRGVLFHSGGKFILSC-ADDKTLRVWDYKNK 370 (410)
T ss_dssp T--TEEEEEEECCSSCEEEEEECSSSSCEEEE-ETTTEEEEECCTTS
T ss_pred C--CceEEEEECCCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCC
Confidence 4 22222333455567889998766666544 34566766666543
No 216
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.28 E-value=0.029 Score=61.51 Aligned_cols=123 Identities=10% Similarity=0.054 Sum_probs=89.1
Q ss_pred EEE-EeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC
Q psy13629 109 DIR-IANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~-~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
.+. ++++.+ .....+......+..++|+++++.|+++. ..+.|+.+++++. ....+.........++++.+.++
T Consensus 359 ~l~~~~d~~~-~~~~~l~~~~~~~~~~~~SpDG~~la~~~-~~~~v~~~d~~tg---~~~~~~~~~~~~v~~~~~SpDG~ 433 (1045)
T 1k32_A 359 DFLGIYDYRT-GKAEKFEENLGNVFAMGVDRNGKFAVVAN-DRFEIMTVDLETG---KPTVIERSREAMITDFTISDNSR 433 (1045)
T ss_dssp EEEEEEETTT-CCEEECCCCCCSEEEEEECTTSSEEEEEE-TTSEEEEEETTTC---CEEEEEECSSSCCCCEEECTTSC
T ss_pred ceEEEEECCC-CCceEecCCccceeeeEECCCCCEEEEEC-CCCeEEEEECCCC---ceEEeccCCCCCccceEECCCCC
Confidence 556 667766 34344444556788999999999998876 5679999999865 33444434445568899999888
Q ss_pred eEEEEeCC---------CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEee
Q psy13629 188 KLYWTDSE---------TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDW 237 (395)
Q Consensus 188 ~LYwtd~~---------~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~ 237 (395)
.|.++... ...|.+.++++.....+. .....+..++++|+.++|||...
T Consensus 434 ~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~-~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 434 FIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS-CSSSBEEEEEECTTSCEEEEEES
T ss_pred eEEEEecCccccccCCCCCeEEEEECCCCcEEEee-CCCcccCCceEcCCCCEEEEEec
Confidence 88877542 258999999886644333 44566788999999999998864
No 217
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.25 E-value=0.085 Score=49.43 Aligned_cols=163 Identities=6% Similarity=-0.038 Sum_probs=106.1
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.+++|++.++.+ .+...++.|...++... .....+......+.++++.+.+ +
T Consensus 165 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sg~~d~~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~-~ 239 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF-VSGACDASAKLWDVREG---MCRQTFTGHESDINAICFFPNG-N 239 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTC---SEEEEECCCSSCEEEEEECTTS-S
T ss_pred cEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE-EEEeCCCcEEEEECCCC---eeEEEEcCCcCCEEEEEEcCCC-C
Confidence 67778876633334444556778999999977654 45557889999998764 2233344444568899999854 4
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecC--CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWED--IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~--~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
++.+-...+.|.+.++........+... ......++++|...+|.... ....|...++.. ......+..+-...
T Consensus 240 ~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~--~d~~i~vwd~~~--~~~~~~~~~h~~~v 315 (340)
T 1got_B 240 AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY--DDFNCNVWDALK--ADRAGVLAGHDNRV 315 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE--TTSEEEEEETTT--CCEEEEEECCSSCE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC--CCCeEEEEEccc--CcEeeEeecCCCcE
Confidence 5556667889999999876554444221 23468899999877776554 356788888765 33333344455566
Q ss_pred eeEEEeccccEEEE
Q psy13629 267 NGIAIDFNNRLLYW 280 (395)
Q Consensus 267 ~glalD~~~~rLYw 280 (395)
..+++.+++..|.-
T Consensus 316 ~~~~~s~dg~~l~s 329 (340)
T 1got_B 316 SCLGVTDDGMAVAT 329 (340)
T ss_dssp EEEEECTTSSCEEE
T ss_pred EEEEEcCCCCEEEE
Confidence 77777765554443
No 218
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.069 Score=52.16 Aligned_cols=164 Identities=8% Similarity=-0.061 Sum_probs=100.7
Q ss_pred EEEEeeCCCCCccE----EecCCCCCeEEEEEEcC---CCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEE
Q psy13629 109 DIRIANLSRPLKPV----TIIKDLEEGAAIDYYYK---KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~~~~----~~~~~~~~~~gl~~d~~---~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glA 181 (395)
.|..+++....... .+......+.+++|++. ++.|+ +...++.|..++++... ............+..++
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~-s~~~d~~i~vwd~~~~~--~~~~~~~~h~~~v~~~~ 248 (450)
T 2vdu_B 172 DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII-TSDRDEHIKISHYPQCF--IVDKWLFGHKHFVSSIC 248 (450)
T ss_dssp EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE-EEETTSCEEEEEESCTT--CEEEECCCCSSCEEEEE
T ss_pred cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE-EEcCCCcEEEEECCCCc--eeeeeecCCCCceEEEE
Confidence 46777765422111 23334567899999998 55555 44478899999988642 22333333445678899
Q ss_pred EecCCCeEEEEeCCCCeEEEEECCCCceEEEEec-------------------------CCCCceeEEEeCCCCeEEEEe
Q psy13629 182 IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-------------------------DIDQPRAIALVPQDSIMFWTD 236 (395)
Q Consensus 182 VD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~-------------------------~~~~P~~iavdp~~g~LYwtd 236 (395)
+. .++.| ++-...+.|.+.++........+.. ......+|+..|...+||.+.
T Consensus 249 ~s-d~~~l-~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 249 CG-KDYLL-LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp EC-STTEE-EEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred EC-CCCEE-EEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 88 44455 4555778999999987665444421 123467899999888898876
Q ss_pred eCCCCeEEEEec--CCCCc-ceEEEEecCCcCceeEEEeccccEEEEe
Q psy13629 237 WGEVPKIERGAM--NGDPR-HRKVIVDSTIFWPNGIAIDFNNRLLYWI 281 (395)
Q Consensus 237 ~~~~~~I~~~~~--dG~~~-~~~~lv~~~~~~P~glalD~~~~rLYwa 281 (395)
.....|...++ ..... .....+..+ ..+..++++. +.++++
T Consensus 327 -~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~--~~~~v~ 370 (450)
T 2vdu_B 327 -EATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN--DEFQVT 370 (450)
T ss_dssp -TTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET--TEEEEE
T ss_pred -CCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC--CcEEEE
Confidence 33566777777 22001 111122223 5788888885 345555
No 219
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.24 E-value=0.021 Score=54.63 Aligned_cols=179 Identities=8% Similarity=0.011 Sum_probs=114.1
Q ss_pred EEEEeeCCCCCccEEe-cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTI-IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~-~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
.|++.++.. ...... ......+.+++|++.++.|+.. ..++.|..++++... ....+......+.++++.+.++
T Consensus 120 ~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~ 194 (420)
T 3vl1_A 120 DIKVLDSNF-NLQREIDQAHVSEITKLKFFPSGEALISS-SQDMQLKIWSVKDGS---NPRTLIGHRATVTDIAIIDRGR 194 (420)
T ss_dssp CEEEECTTS-CEEEEETTSSSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCC---CCEEEECCSSCEEEEEEETTTT
T ss_pred CEEEEeCCC-cceeeecccccCccEEEEECCCCCEEEEE-eCCCeEEEEeCCCCc---CceEEcCCCCcEEEEEEcCCCC
Confidence 678888876 343333 4567789999999988766654 478899999998652 2233344456788999998666
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEecC------------------------CCCceeEEEeCCCCeEEEEeeCCCCeE
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWED------------------------IDQPRAIALVPQDSIMFWTDWGEVPKI 243 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~~------------------------~~~P~~iavdp~~g~LYwtd~~~~~~I 243 (395)
.|+ +-...+.|.+.++........+... ......++++|...+|+... ....|
T Consensus 195 ~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i 271 (420)
T 3vl1_A 195 NVL-SASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH--VSGVI 271 (420)
T ss_dssp EEE-EEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE--TTSCE
T ss_pred EEE-EEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc--CCCeE
Confidence 665 5556788999998866555444221 13334455667665665544 24567
Q ss_pred EEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 244 ERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 244 ~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
...++... .....+...+......+++++.+..++++-...+.|...++...
T Consensus 272 ~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 272 TVHNVFSK-EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp EEEETTTC-CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred EEEECCCC-ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 77887651 22222323344567889998777734444445577877777654
No 220
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.24 E-value=0.048 Score=51.69 Aligned_cols=178 Identities=4% Similarity=-0.119 Sum_probs=114.7
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCC------------
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT------------ 176 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~------------ 176 (395)
.|++.+.++ .....+......+.+++|++.++.|+... .++.|..+++... .....+......
T Consensus 131 ~i~i~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 205 (425)
T 1r5m_A 131 ELRLWNKTG-ALLNVLNFHRAPIVSVKWNKDGTHIISMD-VENVTILWNVISG---TVMQHFELKETGGSSINAENHSGD 205 (425)
T ss_dssp CEEEEETTS-CEEEEECCCCSCEEEEEECTTSSEEEEEE-TTCCEEEEETTTT---EEEEEECCC---------------
T ss_pred eEEEEeCCC-CeeeeccCCCccEEEEEECCCCCEEEEEe-cCCeEEEEECCCC---cEEEEeeccccCccceeeccccCC
Confidence 577777544 44445555677899999999888887665 6788999998764 222222222222
Q ss_pred ---cceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc
Q psy13629 177 ---PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR 253 (395)
Q Consensus 177 ---p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~ 253 (395)
+..+++.+ .+. +++-...+.|.+.++........+.........++++|...+|+.+. ....|...++.. .
T Consensus 206 ~~~~~~~~~~~-~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~i~i~d~~~--~ 279 (425)
T 1r5m_A 206 GSLGVDVEWVD-DDK-FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS--DDGTLRIWHGGN--G 279 (425)
T ss_dssp CCCBSCCEEEE-TTE-EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE--TTSCEEEECSSS--B
T ss_pred cceeeEEEEcC-CCE-EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc--CCCEEEEEECCC--C
Confidence 66777765 344 55666678999999987665555544556678999999887776655 245677777765 2
Q ss_pred ceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccceee
Q psy13629 254 HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRL 299 (395)
Q Consensus 254 ~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~ 299 (395)
.....+..+-.....+++...+ ++++-...+.|...++......
T Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 280 NSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEE
T ss_pred ccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEe
Confidence 2222333344567788888655 4455555677877777544433
No 221
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.24 E-value=0.13 Score=47.75 Aligned_cols=175 Identities=10% Similarity=0.032 Sum_probs=113.1
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCC--
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT-- 186 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~-- 186 (395)
.|++.++........+......+.+++|++.++.|. +...++.|...++++. . ...+.........+++.+..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~vwd~~~~---~-~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMII-SGSRDKTIKVWTIKGQ---C-LATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEE-EEETTSCEEEEETTSC---E-EEEECCCSSCEEEEEECCC---
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCC---e-EEEEeccCCcEEEEEEccCCCC
Confidence 788888876444445556677889999998877655 5557889999999874 2 22333333455667765532
Q ss_pred ---CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCC
Q psy13629 187 ---EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTI 263 (395)
Q Consensus 187 ---~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~ 263 (395)
+.+.++-...+.|.+.++........+.......+.++++|...+|.-+. ....|...++.. ......+ ..-
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~--~dg~i~iwd~~~--~~~~~~~-~~~ 237 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAG--KDGEIMLWNLAA--KKAMYTL-SAQ 237 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEE--TTCEEEEEETTT--TEEEEEE-ECC
T ss_pred CCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEECCC--CcEEEEe-cCC
Confidence 33556666788999999987665554544566788999999776665443 356788888875 2221112 222
Q ss_pred cCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 264 FWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 264 ~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
.....+++.+.+..|..+.... |...+++.
T Consensus 238 ~~v~~~~~sp~~~~la~~~~~~--i~v~~~~~ 267 (319)
T 3frx_A 238 DEVFSLAFSPNRYWLAAATATG--IKVFSLDP 267 (319)
T ss_dssp SCEEEEEECSSSSEEEEEETTE--EEEEEETT
T ss_pred CcEEEEEEcCCCCEEEEEcCCC--cEEEEeCc
Confidence 3577888888877777665443 44444443
No 222
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.21 E-value=0.039 Score=52.27 Aligned_cols=116 Identities=4% Similarity=-0.108 Sum_probs=81.3
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC---C---CCCcceEEEecCCCeEEEEeCCC---C
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN---G---LITPDGLAIDWLTEKLYWTDSET---N 197 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~---~---~~~p~glAVD~~~~~LYwtd~~~---~ 197 (395)
....+.+++|++.+ ++++...++.|..+++... .....+.. . ...+..+++++.+..|+.+ ... +
T Consensus 185 ~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~-~~d~~~g 258 (397)
T 1sq9_A 185 PSQFATSVDISERG--LIATGFNNGTVQISELSTL---RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-HDSNSFG 258 (397)
T ss_dssp SCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT---EEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-EEETTEE
T ss_pred CCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC---ceeEEEeccccccccCCccceEEECCCCCEEEEE-ecCCCCc
Confidence 45678899999987 5556668899999999864 22233333 2 5568899998866655544 345 7
Q ss_pred eEEEEECCCCceEEEEec-------------CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 198 KLEVSSLDGKKRKVLYWE-------------DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 198 ~I~v~~ldg~~~~~l~~~-------------~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
.|.+.++........+.. .......++++|...+|+... ....|...++..
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~ 322 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG--WDGKLRFWDVKT 322 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE--TTSEEEEEETTT
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe--CCCeEEEEEcCC
Confidence 899999976655554533 456678999999887776554 356788888865
No 223
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.20 E-value=0.13 Score=47.24 Aligned_cols=180 Identities=10% Similarity=-0.004 Sum_probs=113.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.+++|++.++.|+ +...++.|...+++... ...............+++++.++.
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs~D~~v~lWd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVL-SGSDDLTVKLWNWENNW--ALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEE-EEETTSCEEEEEGGGTT--EEEEEECCCCSCEEEEEECTTCTT
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEE-EECCCCeEEEEECCCCc--chhhhhcccCCcEEEEEECCCCCC
Confidence 688888876444445555677789999999887665 55578999999987542 222333444456788999886777
Q ss_pred EEEEeCCCCeEEEEECCCCceE-EEEecCCCCceeEEEeCC-CCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRK-VLYWEDIDQPRAIALVPQ-DSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~-~l~~~~~~~P~~iavdp~-~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
+..+-...+.|.+.++...... .+..........+.+.|. ++.+..+- +....|...++.. ......+..+....
T Consensus 155 ~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-s~D~~i~iWd~~~--~~~~~~~~~h~~~v 231 (304)
T 2ynn_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA-SDDLTIKIWDYQT--KSCVATLEGHMSNV 231 (304)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEE-ETTSEEEEEETTT--TEEEEEEECCSSCE
T ss_pred EEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEE-cCCCeEEEEeCCC--CccceeeCCCCCCE
Confidence 7777778899999998665443 333222344566777763 23333343 3356788888765 23333334455566
Q ss_pred eeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
..+++.+.+..|. +-..++.|..-+...
T Consensus 232 ~~~~~~p~~~~l~-s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 232 SFAVFHPTLPIII-SGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEECSSSSEEE-EEETTSCEEEEETTT
T ss_pred EEEEECCCCCEEE-EEcCCCeEEEEECCC
Confidence 7778876655444 333456666655544
No 224
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.20 E-value=0.12 Score=50.04 Aligned_cols=157 Identities=7% Similarity=-0.010 Sum_probs=101.5
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.+++|++.++.|. +...++.|..+++++. .....+.........+++.+.++.
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~-sgs~D~~i~iwd~~~~---~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA-SCSADMTIKLWDFQGF---ECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEE-EEETTSCCCEEETTSS---CEEECCCCCSSCEEEEEECSSSSE
T ss_pred eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCC---ceeEEEcCCCCCEEEEEEeCCCCE
Confidence 688888876444445555667889999998777554 5557889999998764 222222233456788999885555
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
| ++-...+.|.+.++....+...+.......+.++++|....|.-+. ....|...++.. ......+..+-.....
T Consensus 207 l-~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s--~D~~v~vwd~~~--~~~~~~~~~h~~~v~~ 281 (410)
T 1vyh_C 207 I-VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS--NDQTVRVWVVAT--KECKAELREHRHVVEC 281 (410)
T ss_dssp E-EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTT--CCEEEEECCCSSCEEE
T ss_pred E-EEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc--CCCeEEEEECCC--CceeeEecCCCceEEE
Confidence 5 5666788999999987766555545556678899988665554433 345677777765 2333333334344566
Q ss_pred EEEecc
Q psy13629 269 IAIDFN 274 (395)
Q Consensus 269 lalD~~ 274 (395)
+++.+.
T Consensus 282 ~~~~~~ 287 (410)
T 1vyh_C 282 ISWAPE 287 (410)
T ss_dssp EEECCS
T ss_pred EEEcCc
Confidence 666543
No 225
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.19 E-value=0.057 Score=50.38 Aligned_cols=179 Identities=12% Similarity=0.016 Sum_probs=108.7
Q ss_pred EEEEeeCCCCCc--cEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE-eCCCCCcceEEEecC
Q psy13629 109 DIRIANLSRPLK--PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-TNGLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~~--~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~-~~~~~~p~glAVD~~ 185 (395)
.|++.++..... ..........+..++|++.++.|+... .++.|..++++........... ......+..+++.+.
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 153 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 153 (372)
T ss_dssp CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT
T ss_pred eEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC
Confidence 466666655221 112234556789999999888777766 6788888888765211112222 223456888999885
Q ss_pred CCeEEEEeCCCCeEEEEECC------------------CCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEe
Q psy13629 186 TEKLYWTDSETNKLEVSSLD------------------GKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGA 247 (395)
Q Consensus 186 ~~~LYwtd~~~~~I~v~~ld------------------g~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~ 247 (395)
++.| ++-...+.|.+.++. .......+........+++++|...+|+.+. ....|...+
T Consensus 154 ~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d 230 (372)
T 1k8k_C 154 SVLL-AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS--HDSTVCLAD 230 (372)
T ss_dssp SSEE-EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE--TTTEEEEEE
T ss_pred CCEE-EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe--CCCEEEEEE
Confidence 5544 455567889999964 2222222323455688999999877777655 356788888
Q ss_pred cCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 248 MNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 248 ~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
+.. ......+..+......++++..+..|..+ ..+.|...+++.
T Consensus 231 ~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~i~~~~~ 274 (372)
T 1k8k_C 231 ADK--KMAVATLASETLPLLAVTFITESSLVAAG--HDCFPVLFTYDS 274 (372)
T ss_dssp GGG--TTEEEEEECSSCCEEEEEEEETTEEEEEE--TTSSCEEEEEET
T ss_pred CCC--CceeEEEccCCCCeEEEEEecCCCEEEEE--eCCeEEEEEccC
Confidence 864 23333333444456788888666544444 455665555544
No 226
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.15 Score=47.16 Aligned_cols=170 Identities=8% Similarity=-0.059 Sum_probs=111.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECC----CCeEEEEEccCCCCCceEE--------EEe--CCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHG----TEMISCCTFDGNNVGSKHN--------VIT--NGL 174 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~----~~~I~~~~~dg~~~~~~~~--------i~~--~~~ 174 (395)
.|++.++.. .+..........+.+++|++.++.++.+... .+.|..++++......... .+. ...
T Consensus 97 ~i~iwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 97 SIKLWDVSN-GQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEEETTT-CCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred eEEEEECCC-CcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 688888876 3444444467789999999999888877632 2788888876542111111 111 112
Q ss_pred CCcceEEEecCCCeEEEEeCCCCeEEEEECCC-CceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc
Q psy13629 175 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG-KKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR 253 (395)
Q Consensus 175 ~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg-~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~ 253 (395)
..+..+++++.++.|+... ..+.|.+.++.. ......+........+++++|...+|+.+. ....|...++.. .
T Consensus 176 ~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~v~d~~~--~ 250 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGH-KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSS--RDTNSFLVDVST--L 250 (369)
T ss_dssp CCEEEEEECGGGCEEEEEE-TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTT--C
T ss_pred cceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEec--CCceEEEEECCC--C
Confidence 2778899988666666544 568999999987 444444445566789999999877776654 246788888875 2
Q ss_pred ceEEEEecCCcCceeEEEeccccEEEEeccce
Q psy13629 254 HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRL 285 (395)
Q Consensus 254 ~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~ 285 (395)
.....+. .-.....++++..+..|+.+....
T Consensus 251 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 251 QVLKKYE-TDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp CEEEEEE-CSSCEEEEEECSSSSEEEEEECCC
T ss_pred ceeeeec-CCCCceeEEecCCCceEEEeecCC
Confidence 2222222 334577888988888888776543
No 227
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.17 E-value=0.0096 Score=58.16 Aligned_cols=161 Identities=9% Similarity=0.017 Sum_probs=109.4
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CCCCCcceEEEecCCCeEEEEeCCCCeEEEEECC
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 205 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ld 205 (395)
....+.+|+|+|....+..+...++.|...+++... ....+.. ..-....+|++.+.++++.++-...+.|.+.++.
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~--~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD--KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS--CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC--ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 345689999999777677777788999999987642 1122222 2335688999988777777788888999999999
Q ss_pred CCceEEEEecC--CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEecc
Q psy13629 206 GKKRKVLYWED--IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDG 283 (395)
Q Consensus 206 g~~~~~l~~~~--~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~ 283 (395)
+.....+.... ......++++|...+|.... ....|...+++| ..... +..+-...+.+++++.++.++.+-.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~--~dg~i~~wd~~~--~~~~~-~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGD--NVGNVILLNMDG--KELWN-LRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC--SSSBEEEEESSS--CBCCC-SBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEe--CCCcEeeeccCc--ceeEE-EecccceEEeeeecCCCceEEEEec
Confidence 87776665432 23457899999777666544 356788888887 22221 2233445778888877776766655
Q ss_pred ceeeeeeeccc
Q psy13629 284 RLTFIEVMDYD 294 (395)
Q Consensus 284 ~~~~I~~~~~d 294 (395)
.++.|..-++.
T Consensus 271 ~d~~v~iwd~~ 281 (435)
T 4e54_B 271 VDQTVKIWDLR 281 (435)
T ss_dssp TTSBCCEEETT
T ss_pred CcceeeEEecc
Confidence 55666555543
No 228
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.10 E-value=0.12 Score=49.39 Aligned_cols=180 Identities=4% Similarity=-0.069 Sum_probs=113.8
Q ss_pred EEEEeeCCCCCccEEe-----cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEe
Q psy13629 109 DIRIANLSRPLKPVTI-----IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAID 183 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~-----~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD 183 (395)
.|++.++........+ ......+..+++.+.++.++.+...++.|...++.... .....+......+..+++.
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v~~~ 258 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDINSVKFF 258 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCCCEEEEC
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCeEEEEEe
Confidence 6788888663333322 22345678899988677788888789999999987331 1122333344568899999
Q ss_pred cCCCeEEEEeCCCCeEEEEECCCCceEEEEecC-------CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceE
Q psy13629 184 WLTEKLYWTDSETNKLEVSSLDGKKRKVLYWED-------IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRK 256 (395)
Q Consensus 184 ~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~-------~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~ 256 (395)
+. +..+.+-...+.|.+.++........+... ......++++|.+.+|+... ....|...+... ....
T Consensus 259 p~-~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~--~dg~i~vwd~~~--~~~~ 333 (380)
T 3iz6_a 259 PD-GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY--SNGDCYVWDTLL--AEMV 333 (380)
T ss_dssp TT-SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC--TTSCEEEEETTT--CCEE
T ss_pred cC-CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE--CCCCEEEEECCC--CceE
Confidence 84 455567778899999999877665554321 12357899999877776543 355677777654 2222
Q ss_pred EEE----ecCCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 257 VIV----DSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 257 ~lv----~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
.-. ..+....+.+++.+++..|.-+ +.++.|..-++.+.
T Consensus 334 ~~~~~~~~~h~~~v~~l~~s~dg~~l~sg-s~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 334 LNLGTLQNSHEGRISCLGLSSDGSALCTG-SWDKNLKIWAFSGH 376 (380)
T ss_dssp EEECCSCSSCCCCCCEEEECSSSSEEEEE-CTTSCEEEEECCSS
T ss_pred EEEecccCCCCCceEEEEECCCCCEEEEe-eCCCCEEEEecCCC
Confidence 222 2344567788888766655444 33455555555443
No 229
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.10 E-value=0.11 Score=49.09 Aligned_cols=182 Identities=12% Similarity=-0.022 Sum_probs=111.8
Q ss_pred EEEEeeCCCCCc-----cEEecCC-----CCCeEEEEEE----cCCCE-EEEEECCCCeEEEEEccC------CCCCc--
Q psy13629 109 DIRIANLSRPLK-----PVTIIKD-----LEEGAAIDYY----YKKSM-VCWTDHGTEMISCCTFDG------NNVGS-- 165 (395)
Q Consensus 109 ~I~~~~l~~~~~-----~~~~~~~-----~~~~~gl~~d----~~~~~-lywsd~~~~~I~~~~~dg------~~~~~-- 165 (395)
.|+++++..... ...+... ...+.+++|+ +.++. |+... .++.|..+++.. .....
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~ 170 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD-VKGTTYIWKFHPFADESNSLTLNWS 170 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE-TTSCEEEEEEESSSSHHHHTTTCCC
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe-CCCcEEEEeCCccccccccceeecc
Confidence 566666655222 3333333 2778999999 88887 55544 678888888775 22111
Q ss_pred eE-EEE------eCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEec---C---CCCceeEEEeCCCCeE
Q psy13629 166 KH-NVI------TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE---D---IDQPRAIALVPQDSIM 232 (395)
Q Consensus 166 ~~-~i~------~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~---~---~~~P~~iavdp~~g~L 232 (395)
.. .+. ......+..+++.+.+ ++++-...+.|.+.++........+.. . ......++++|...+|
T Consensus 171 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l 248 (397)
T 1sq9_A 171 PTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 248 (397)
T ss_dssp CEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEE
T ss_pred CcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEE
Confidence 01 222 2234568899999855 666667789999999987665555534 3 6678999999988777
Q ss_pred EEEeeC-CCCeEEEEecCCCCcceEEEEec-------------CCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 233 FWTDWG-EVPKIERGAMNGDPRHRKVIVDS-------------TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 233 Ywtd~~-~~~~I~~~~~dG~~~~~~~lv~~-------------~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
+.+... ....|...++.. ......+.. +-.....+++++.++.|+.+. ..+.|...++...
T Consensus 249 ~~~~~d~~~g~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 249 AIAHDSNSFGCITLYETEF--GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDVKTK 323 (397)
T ss_dssp EEEEEETTEEEEEEEETTT--CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTT
T ss_pred EEEecCCCCceEEEEECCC--CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCC
Confidence 765521 115788888765 232222333 445677888887766665554 4566766666543
No 230
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.09 E-value=0.16 Score=48.65 Aligned_cols=155 Identities=6% Similarity=-0.057 Sum_probs=99.2
Q ss_pred eEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceE
Q psy13629 131 GAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK 210 (395)
Q Consensus 131 ~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~ 210 (395)
+.+++|++.++.|+... .++.|..++++.. .....+.........+++.+.++.|+ +-...+.|.+.++......
T Consensus 126 v~~v~~s~dg~~l~s~~-~d~~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGA-EDRLIRIWDIENR---KIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp EEEEEECTTSSEEEEEE-TTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEE
T ss_pred EEEEEECCCCCEEEEEc-CCCeEEEEECCCC---cEEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCeeE
Confidence 67899999888776554 7889999999865 23333444445678899988666665 5556789999999876665
Q ss_pred EEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEE------ecCCcCceeEEEeccccEEEEeccc
Q psy13629 211 VLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIV------DSTIFWPNGIAIDFNNRLLYWIDGR 284 (395)
Q Consensus 211 ~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv------~~~~~~P~glalD~~~~rLYwaD~~ 284 (395)
..+ ........++++|.++.++.+- +....|...++... .....+. ..+......++++++++.|+.+. .
T Consensus 201 ~~~-~~~~~v~~~~~~~~~~~~l~~~-s~d~~v~iwd~~~~-~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~ 276 (393)
T 1erj_A 201 LTL-SIEDGVTTVAVSPGDGKYIAAG-SLDRAVRVWDSETG-FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS-L 276 (393)
T ss_dssp EEE-ECSSCEEEEEECSTTCCEEEEE-ETTSCEEEEETTTC-CEEEEEC------CCCSSCEEEEEECTTSSEEEEEE-T
T ss_pred EEE-EcCCCcEEEEEECCCCCEEEEE-cCCCcEEEEECCCC-cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe-C
Confidence 444 3445678899999666555554 33456777776541 1111111 12334567888887776665543 3
Q ss_pred eeeeeeeccc
Q psy13629 285 LTFIEVMDYD 294 (395)
Q Consensus 285 ~~~I~~~~~d 294 (395)
++.|..-++.
T Consensus 277 d~~v~~wd~~ 286 (393)
T 1erj_A 277 DRSVKLWNLQ 286 (393)
T ss_dssp TSEEEEEEC-
T ss_pred CCEEEEEECC
Confidence 4556555554
No 231
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.08 E-value=0.15 Score=48.21 Aligned_cols=166 Identities=5% Similarity=-0.048 Sum_probs=107.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCC-CEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~-~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
.|++.++........+......+..+++.+.. +.++++...++.|...++... ..............++++.+.+
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~- 252 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG---QCVQAFETHESDVNSVRYYPSG- 252 (354)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTS-
T ss_pred cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC---cEEEEecCCCCCeEEEEEeCCC-
Confidence 68888887633344444556677888887753 356666668899999998864 2233333344567889998855
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEecC--CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcC
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWED--IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFW 265 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~~--~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~ 265 (395)
.++.+-...+.|.+.++............ ......++++|...+|+... ....|...++.. ......+..+...
T Consensus 253 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~--~d~~i~vwd~~~--~~~~~~l~~h~~~ 328 (354)
T 2pbi_B 253 DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY--NDYTINVWDVLK--GSRVSILFGHENR 328 (354)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE--TTSCEEEEETTT--CSEEEEECCCSSC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE--CCCcEEEEECCC--CceEEEEECCCCc
Confidence 45556667889999999876655554322 23567899999877776554 245677777743 2232333345556
Q ss_pred ceeEEEeccccEEEEec
Q psy13629 266 PNGIAIDFNNRLLYWID 282 (395)
Q Consensus 266 P~glalD~~~~rLYwaD 282 (395)
...+++.+++..|..+.
T Consensus 329 v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 329 VSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp EEEEEECTTSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEc
Confidence 77888887666555443
No 232
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.07 E-value=0.19 Score=50.29 Aligned_cols=179 Identities=7% Similarity=-0.050 Sum_probs=111.2
Q ss_pred EEEEeeCCCC----CccEEecCCCCC-eEEEEEEc--CCCEEEEEECCCCeEEEEEccCC------CCCceEEEEeCCCC
Q psy13629 109 DIRIANLSRP----LKPVTIIKDLEE-GAAIDYYY--KKSMVCWTDHGTEMISCCTFDGN------NVGSKHNVITNGLI 175 (395)
Q Consensus 109 ~I~~~~l~~~----~~~~~~~~~~~~-~~gl~~d~--~~~~lywsd~~~~~I~~~~~dg~------~~~~~~~i~~~~~~ 175 (395)
.|++.+++.. .....+...... +.+++|++ .++.|+... .++.|..++++.. .. .....+.....
T Consensus 40 ~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-~dg~v~vw~~~~~~~~~~~~~-~~~~~~~~~~~ 117 (615)
T 1pgu_A 40 SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-ESGKVIVWGWTFDKESNSVEV-NVKSEFQVLAG 117 (615)
T ss_dssp EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE-TTSEEEEEEEEEEGGGTEEEE-EEEEEEECCSS
T ss_pred eEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec-CCCEEEEEeCCCCcccccccc-cccchhhcccc
Confidence 6788888763 344455556667 89999999 877776555 6788988888521 00 11223333446
Q ss_pred CcceEEEecCCCeEEEEeCCC---CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCC
Q psy13629 176 TPDGLAIDWLTEKLYWTDSET---NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDP 252 (395)
Q Consensus 176 ~p~glAVD~~~~~LYwtd~~~---~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~ 252 (395)
.+..+++.+.++.|+.+.... +.|.+.+ .......+.........++++|.+..++.+- +....|...+...
T Consensus 118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~v~vwd~~~-- 192 (615)
T 1pgu_A 118 PISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTV-GDDGSVVFYQGPP-- 192 (615)
T ss_dssp CEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEE-ETTTEEEEEETTT--
T ss_pred cEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEE-eCCCcEEEEeCCC--
Confidence 788999999888887776432 4566555 2223333334566789999999887555554 3356777777765
Q ss_pred cceEEEEecCCc---CceeEEEecc-ccEEEEeccceeeeeeecccc
Q psy13629 253 RHRKVIVDSTIF---WPNGIAIDFN-NRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 253 ~~~~~lv~~~~~---~P~glalD~~-~~rLYwaD~~~~~I~~~~~dG 295 (395)
......+..+.. ....+++++. +..|+.+. ..+.|...++..
T Consensus 193 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~ 238 (615)
T 1pgu_A 193 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG-SDRKISCFDGKS 238 (615)
T ss_dssp BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE-TTCCEEEEETTT
T ss_pred cceeeeecccCCCCceEEEEEECCCCCCEEEEEe-CCCeEEEEECCC
Confidence 233233333444 5678888877 55555544 345666666543
No 233
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.05 E-value=0.067 Score=55.87 Aligned_cols=182 Identities=8% Similarity=0.017 Sum_probs=109.7
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCC---------------CeEEEEEccCCCCCceEEEEeCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT---------------EMISCCTFDGNNVGSKHNVITNG 173 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~---------------~~I~~~~~dg~~~~~~~~i~~~~ 173 (395)
.|+++++++........... ...+++|.++++.||++.... ..|++.++.+.. ....++...
T Consensus 152 ~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~--~~~~~v~~~ 228 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ--SEDILCAEF 228 (710)
T ss_dssp EEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG--GGCEEEECC
T ss_pred EEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc--ccceEEecc
Confidence 78889998733222222222 246789999999999986432 348988887642 112333332
Q ss_pred C---CCcceEEEecCCCeEEEEeC-C---CCeEEEEECCC------C--ceEEEEecCCCCceeEEEeCCCCeEEEEeeC
Q psy13629 174 L---ITPDGLAIDWLTEKLYWTDS-E---TNKLEVSSLDG------K--KRKVLYWEDIDQPRAIALVPQDSIMFWTDWG 238 (395)
Q Consensus 174 ~---~~p~glAVD~~~~~LYwtd~-~---~~~I~v~~ldg------~--~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~ 238 (395)
. ....++++.+.++.|+++.. . ...|.+.++++ . ..+.+. .....-. -.+++.++.||+....
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~-~~~~~~~-~~~s~dg~~l~~~s~~ 306 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI-DNFEGEY-DYVTNEGTVFTFKTNR 306 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE-CSSSSCE-EEEEEETTEEEEEECT
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee-CCCCcEE-EEEeccCCEEEEEECC
Confidence 2 22458899998888888753 2 57899999985 3 234444 3222222 3578888888887532
Q ss_pred --CCCeEEEEecCCCCc-ceEEEEecCC-cCceeEEEeccccEEEEecc--ceeeeeeecc-ccc
Q psy13629 239 --EVPKIERGAMNGDPR-HRKVIVDSTI-FWPNGIAIDFNNRLLYWIDG--RLTFIEVMDY-DGY 296 (395)
Q Consensus 239 --~~~~I~~~~~dG~~~-~~~~lv~~~~-~~P~glalD~~~~rLYwaD~--~~~~I~~~~~-dG~ 296 (395)
...+|.++++++... .-+.++...- ....++++. .+++|+++-. ...+|...++ +|.
T Consensus 307 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 307 HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCCC
Confidence 256899999987211 1245554421 234556655 4666776643 3346777777 554
No 234
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.04 E-value=0.17 Score=48.48 Aligned_cols=179 Identities=8% Similarity=-0.046 Sum_probs=109.5
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.+++|++.++.|+-. ..++.|...++... . ..........+..+++.+..++
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~~v~iwd~~~~---~-~~~~~~~~~~v~~~~~~~~~~~ 220 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG-SGDRTVRIWDLRTG---Q-CSLTLSIEDGVTTVAVSPGDGK 220 (393)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTT---E-EEEEEECSSCEEEEEECSTTCC
T ss_pred eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEe-cCCCcEEEEECCCC---e-eEEEEEcCCCcEEEEEECCCCC
Confidence 68888887633334444566778999999988877644 47889999998764 2 2222223345778888886777
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEe-------cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc--------
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYW-------EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR-------- 253 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~-------~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~-------- 253 (395)
+..+-...+.|.+.++........+. .......+++++|...+|+-.. ....|...++.....
T Consensus 221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS--LDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE--TTSEEEEEEC-------------
T ss_pred EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe--CCCEEEEEECCCCCCcccccCCC
Confidence 77777778899999988665443331 1234578899999877776543 245566666643100
Q ss_pred --ceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 254 --HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 254 --~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
........+......+++...+..|..+ ..++.|..-+...
T Consensus 299 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg-s~D~~v~iwd~~~ 341 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLSVATTQNDEYILSG-SKDRGVLFWDKKS 341 (393)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGCEEEEE-ETTSEEEEEETTT
T ss_pred CCcceEEEecccCcEEEEEECCCCCEEEEE-eCCCeEEEEECCC
Confidence 0111122233456677777555554433 3445565555543
No 235
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.01 E-value=0.033 Score=57.77 Aligned_cols=122 Identities=8% Similarity=0.035 Sum_probs=82.1
Q ss_pred EEEEeeCCCCCccEEecCCCC----CeEEEEEEcCCCEEEEEECC--------CCeEEEEEccCCCCCceEEEEeCCC--
Q psy13629 109 DIRIANLSRPLKPVTIIKDLE----EGAAIDYYYKKSMVCWTDHG--------TEMISCCTFDGNNVGSKHNVITNGL-- 174 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~----~~~gl~~d~~~~~lywsd~~--------~~~I~~~~~dg~~~~~~~~i~~~~~-- 174 (395)
.|++.++.+ .+...+..... .+.+++|+++++.|.++... .+.|+..++++.. ...+.....
T Consensus 38 ~i~~~d~~~-g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~l~~~~~~~ 113 (723)
T 1xfd_A 38 TVRLWNVET-NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD---PQSLDPPEVSN 113 (723)
T ss_dssp CEEEBCGGG-CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC---CEECCCTTCCS
T ss_pred CEEEEECCC-CcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc---eEeccCCcccc
Confidence 677788766 33333333322 37899999999988877532 2678889988752 222222111
Q ss_pred CCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCC------------------CceeEEEeCCCCeEEEEe
Q psy13629 175 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDID------------------QPRAIALVPQDSIMFWTD 236 (395)
Q Consensus 175 ~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~------------------~P~~iavdp~~g~LYwtd 236 (395)
..+..+++.+.++.|.++.. +.|.+.++++.....+...... ...+++.+|++++|+++.
T Consensus 114 ~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 12677889998888888765 6899999998776666533221 347899999998887765
No 236
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.01 E-value=0.0077 Score=60.27 Aligned_cols=135 Identities=7% Similarity=-0.033 Sum_probs=83.3
Q ss_pred EEEEeeCCCCC-------------------ccEEecCCCCCeEEEEEEcCCC------EEEEEEC-C----CCeEEEEEc
Q psy13629 109 DIRIANLSRPL-------------------KPVTIIKDLEEGAAIDYYYKKS------MVCWTDH-G----TEMISCCTF 158 (395)
Q Consensus 109 ~I~~~~l~~~~-------------------~~~~~~~~~~~~~gl~~d~~~~------~lywsd~-~----~~~I~~~~~ 158 (395)
.|.+++.++.. ...+.+-++.++.||+||+.++ .+|.+|. . ...|..+..
T Consensus 178 kIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~ 257 (463)
T 2wg3_C 178 SVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIK 257 (463)
T ss_dssp EEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC-
T ss_pred eEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeecc
Confidence 68888888731 3467888999999999999854 6787885 2 234555432
Q ss_pred cCCCC-CceEEEEeCCC--CCcceEEE-------ecCCCeEEEEeCCCCeEEEEECCCCc---eEEEE-e--------cC
Q psy13629 159 DGNNV-GSKHNVITNGL--ITPDGLAI-------DWLTEKLYWTDSETNKLEVSSLDGKK---RKVLY-W--------ED 216 (395)
Q Consensus 159 dg~~~-~~~~~i~~~~~--~~p~glAV-------D~~~~~LYwtd~~~~~I~v~~ldg~~---~~~l~-~--------~~ 216 (395)
|... ........... ..|.|+++ .| .+.+|+++.. ++|.+..+++.. ....+ . ..
T Consensus 258 -G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~-~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 334 (463)
T 2wg3_C 258 -GKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERL-YGSYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYF 334 (463)
T ss_dssp ----CCSCCCCEECCC----CEEEEEECCCSSCTTT-TTCEEEEETT-SCEEEEEC-----CCEEEEECEEETTSSCSCC
T ss_pred -CCCCCCCCCeEEeeCCCCccccceEEEeCCCChhh-cceEEEecCC-CcEEEEEeCCCCceeeEEEeecCCcccccccc
Confidence 2211 01111222211 57899998 33 4568888876 789988886542 22333 1 12
Q ss_pred CCCceeEEEeCCCCeEEEEeeC------CCCeEEEEe
Q psy13629 217 IDQPRAIALVPQDSIMFWTDWG------EVPKIERGA 247 (395)
Q Consensus 217 ~~~P~~iavdp~~g~LYwtd~~------~~~~I~~~~ 247 (395)
...|.+++++| .|.||++++. ...+|+|+.
T Consensus 335 ~~r~~~v~~~p-dG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 335 SGHILGFGEDE-LGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp CSEEEEEEECT-TCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred cCcceEEEECC-CCCEEEEeccCCcccCCCCcEEEec
Confidence 46799999998 5799999984 356777775
No 237
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.01 E-value=0.13 Score=47.73 Aligned_cols=181 Identities=9% Similarity=0.032 Sum_probs=109.1
Q ss_pred EEEEeeCCCCC--ccEEecCCCCCeEEEEEEcC--CCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRPL--KPVTIIKDLEEGAAIDYYYK--KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~--~~~~~~~~~~~~~gl~~d~~--~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|++.++.... ...........+.+++|++. ++.|+... .++.|..++++..... ..............+++.+
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~-~~~~~~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKENGTT-SPIIIDAHAIGVNSASWAP 157 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCTTSCC-CEEEEECCTTCEEEEEECC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec-CCCcEEEEecCCCCce-eeEEecCCCCceEEEEEcC
Confidence 56777776522 23333445677899999998 66665554 7889999998865321 2233344455677888887
Q ss_pred C------------CCeEEEEeCCCCeEEEEECCCCceE-E---EEecCCCCceeEEEeCC---CCeEEEEeeCCCCeEEE
Q psy13629 185 L------------TEKLYWTDSETNKLEVSSLDGKKRK-V---LYWEDIDQPRAIALVPQ---DSIMFWTDWGEVPKIER 245 (395)
Q Consensus 185 ~------------~~~LYwtd~~~~~I~v~~ldg~~~~-~---l~~~~~~~P~~iavdp~---~g~LYwtd~~~~~~I~~ 245 (395)
. .+.++++-...+.|.+.++...... . .+........+++++|. ..+|+.+. ....|..
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~--~dg~i~i 235 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCII 235 (379)
T ss_dssp CC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEE
T ss_pred ccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe--CCCEEEE
Confidence 4 3555566666788999998754322 1 22233556889999998 44454443 2455777
Q ss_pred EecCCCCcc-eEEEEec--CCcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 246 GAMNGDPRH-RKVIVDS--TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 246 ~~~dG~~~~-~~~lv~~--~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
.+++..... ...+... +......+++++++..|+.+.. .+.|..-+++
T Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~ 286 (379)
T 3jrp_A 236 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKEN 286 (379)
T ss_dssp EEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES-SSSEEEEEEE
T ss_pred EeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC-CCcEEEEeCC
Confidence 777652111 2223222 3345677888877777776654 4555544443
No 238
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.12 Score=48.21 Aligned_cols=184 Identities=10% Similarity=-0.004 Sum_probs=108.1
Q ss_pred EEEEeeCCCC-Ccc-EEecCCCCCeEEEEEEcC--CCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRP-LKP-VTIIKDLEEGAAIDYYYK--KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~-~~~-~~~~~~~~~~~gl~~d~~--~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|++.++... ... ..+......+.+++|.+. ++.|+... .++.|..++++.... ............+..+++.+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~ 111 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-YDGKVLIWKEENGRW-SQIAVHAVHSASVNSVQWAP 111 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECC
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec-cCCEEEEEEcCCCce-eEeeeecCCCcceEEEEeCC
Confidence 4666666531 222 233345667889999866 56555444 778899999887510 02222333445688899987
Q ss_pred CC-CeEEEEeCCCCeEEEEECCCCc--eEEEEecCCCCceeEEEeCC-------------CCeEEEEeeCCCCeEEEEec
Q psy13629 185 LT-EKLYWTDSETNKLEVSSLDGKK--RKVLYWEDIDQPRAIALVPQ-------------DSIMFWTDWGEVPKIERGAM 248 (395)
Q Consensus 185 ~~-~~LYwtd~~~~~I~v~~ldg~~--~~~l~~~~~~~P~~iavdp~-------------~g~LYwtd~~~~~~I~~~~~ 248 (395)
.. +.+.++-...+.|.+.++.... ....+.........++++|. ..+|+... ....|...++
T Consensus 112 ~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~ 189 (379)
T 3jrp_A 112 HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG--ADNLVKIWKY 189 (379)
T ss_dssp GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEE--TTSCEEEEEE
T ss_pred CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe--CCCeEEEEEe
Confidence 62 4444555567899999998763 23333355667889999994 44444443 2456777776
Q ss_pred CCCCcceEE--EEecCCcCceeEEEeccc--cEEEEeccceeeeeeeccccc
Q psy13629 249 NGDPRHRKV--IVDSTIFWPNGIAIDFNN--RLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 249 dG~~~~~~~--lv~~~~~~P~glalD~~~--~rLYwaD~~~~~I~~~~~dG~ 296 (395)
......... .+..+......+++++.+ +++..+-...+.|...+++..
T Consensus 190 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 190 NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 542111111 222344567788898773 444444445566766666543
No 239
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.93 E-value=0.071 Score=49.31 Aligned_cols=178 Identities=12% Similarity=0.019 Sum_probs=103.3
Q ss_pred EEEEeeCCCCC-ccEEecCCC----CCeEEEE----EEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcce
Q psy13629 109 DIRIANLSRPL-KPVTIIKDL----EEGAAID----YYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDG 179 (395)
Q Consensus 109 ~I~~~~l~~~~-~~~~~~~~~----~~~~gl~----~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~g 179 (395)
.|++.++.... ....+.... .....++ |++.++.|+.. ..++.|..++++.. . ..........+..
T Consensus 140 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~---~-~~~~~~~~~~v~~ 214 (357)
T 3i2n_A 140 TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG-YDNGDIKLFDLRNM---A-LRWETNIKNGVCS 214 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE-ETTSEEEEEETTTT---E-EEEEEECSSCEEE
T ss_pred eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE-ccCCeEEEEECccC---c-eeeecCCCCceEE
Confidence 67888887633 233333222 2567777 55666655544 47789999999875 2 2222333456788
Q ss_pred EEEec---CCCeEEEEeCCCCeEEEEECCCCceEEEE-----ecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCC
Q psy13629 180 LAIDW---LTEKLYWTDSETNKLEVSSLDGKKRKVLY-----WEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGD 251 (395)
Q Consensus 180 lAVD~---~~~~LYwtd~~~~~I~v~~ldg~~~~~l~-----~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~ 251 (395)
+++++ .++.|+ +-...+.|.+.++........+ .........++++|....++++- +....|...+++..
T Consensus 215 ~~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 215 LEFDRKDISMNKLV-ATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTA-GGAGGLHLWKYEYP 292 (357)
T ss_dssp EEESCSSSSCCEEE-EEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEE-ETTSEEEEEEEECC
T ss_pred EEcCCCCCCCCEEE-EECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEE-eCCCcEEEeecCCC
Confidence 88887 455554 4456788999887654322111 14456788999999776455554 33456666666531
Q ss_pred Ccc-----------------eEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecc
Q psy13629 252 PRH-----------------RKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 252 ~~~-----------------~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~ 293 (395)
... .......+......+++++.+..|.++-..++.|..-++
T Consensus 293 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 293 IQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp SCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred cccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 011 111122344456778888777777655444555554443
No 240
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.93 E-value=0.026 Score=53.40 Aligned_cols=167 Identities=7% Similarity=-0.037 Sum_probs=106.9
Q ss_pred EecCCCCCeEEEEEEc-CCCEEEEEECCCCeEEEEEccCCCCCceEEEE----------eCCCCCcceEEEecCCCeEEE
Q psy13629 123 TIIKDLEEGAAIDYYY-KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI----------TNGLITPDGLAIDWLTEKLYW 191 (395)
Q Consensus 123 ~~~~~~~~~~gl~~d~-~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~----------~~~~~~p~glAVD~~~~~LYw 191 (395)
........+.+++|++ .++.|+ +...++.|..++++........... ......+..+++.+.++.+++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYML-SGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEE-EEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeccCCcEEEEEEecCCCCEEE-EEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 3344567789999999 666555 4447889999999865321111100 013356788888875666666
Q ss_pred EeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCC---eEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 192 TDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDS---IMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 192 td~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g---~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
+-...+.|.+.+++.......+ ........+++.+... .++... ....|...++.. ......+..+-.....
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~d~~~--~~~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVF-NFEETVYSHHMSPVSTKHCLVAVGT--RGPKVQLCDLKS--GSCSHILQGHRQEILA 191 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECSSCSSCCEEEEEE--SSSSEEEEESSS--SCCCEEECCCCSCEEE
T ss_pred EEeCCCeEEEeeCCCCccceec-cCCCceeeeEeecCCCCCcEEEEEc--CCCeEEEEeCCC--cceeeeecCCCCcEEE
Confidence 7667889999999987776665 3455677888888643 454443 245678888765 2222333344456778
Q ss_pred EEEeccccEEEEeccceeeeeeecccc
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
+++.+.+.+++.+-...+.|...++..
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 888877776665555556666666543
No 241
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.92 E-value=0.016 Score=60.24 Aligned_cols=171 Identities=8% Similarity=0.117 Sum_probs=100.3
Q ss_pred EEEEeeCCCCCccEEecCC------CCCeEEEEEEcCCCEEE-EEECC--CCeEEEEEccCCCCCceEEEEeC---CCCC
Q psy13629 109 DIRIANLSRPLKPVTIIKD------LEEGAAIDYYYKKSMVC-WTDHG--TEMISCCTFDGNNVGSKHNVITN---GLIT 176 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~------~~~~~gl~~d~~~~~ly-wsd~~--~~~I~~~~~dg~~~~~~~~i~~~---~~~~ 176 (395)
.|.++++.+......+... ......++|+++++.|+ +++.. ...|+.+++++. ....+... ....
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~ 305 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG---VCTKKHEDESEAWLH 305 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC---CEEEEEEEECSSCCC
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC---cceEEEEeccCCEEe
Confidence 6777888763322333222 33567799999988774 44432 246888888765 22333221 1111
Q ss_pred --cceEEEecCCCeEEEE-eCCCC------eEEEEE-CCCCc---eEEEEecCCCCceeEEEeCCCCeEEEEeeC---CC
Q psy13629 177 --PDGLAIDWLTEKLYWT-DSETN------KLEVSS-LDGKK---RKVLYWEDIDQPRAIALVPQDSIMFWTDWG---EV 240 (395)
Q Consensus 177 --p~glAVD~~~~~LYwt-d~~~~------~I~v~~-ldg~~---~~~l~~~~~~~P~~iavdp~~g~LYwtd~~---~~ 240 (395)
+..+++.+.++.|+++ ....+ +|.+.+ .++.. .+.+..........++++|+++.||++... ..
T Consensus 306 ~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 385 (723)
T 1xfd_A 306 RQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRR 385 (723)
T ss_dssp CCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTC
T ss_pred ccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcc
Confidence 2478888888888886 43333 688888 56655 444432222222336899999999887533 35
Q ss_pred CeEEEEecCCCCcceEEEEec--CCcCceeEEEeccccEEEEecc
Q psy13629 241 PKIERGAMNGDPRHRKVIVDS--TIFWPNGIAIDFNNRLLYWIDG 283 (395)
Q Consensus 241 ~~I~~~~~dG~~~~~~~lv~~--~~~~P~glalD~~~~rLYwaD~ 283 (395)
.+|++++.+|. ...+.+... +......+++++++++|.+...
T Consensus 386 ~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 386 RQLYSANTVGN-FNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp CEEEEECSSTT-CCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred eEEEEEeCCCC-CCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 67888888872 122222211 2234567888888877776543
No 242
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.87 E-value=0.11 Score=54.12 Aligned_cols=161 Identities=9% Similarity=0.030 Sum_probs=101.1
Q ss_pred CeEEEEEEcCCCEEEEEECCC--C--eEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCC----------
Q psy13629 130 EGAAIDYYYKKSMVCWTDHGT--E--MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE---------- 195 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~~~--~--~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~---------- 195 (395)
...+++|++++++|.++-... . .|+..++++.. ......... ...+++..+.++.||++...
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~---~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK---ELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE---EEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC---CCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccc
Confidence 367889999999887764322 2 89999998762 222222221 25678888878889888643
Q ss_pred -----CCeEEEEECCCCceE-EEEecCC---CCceeEEEeCCCCeEEEEeeCC---CCeEEEEecCC------CCcceEE
Q psy13629 196 -----TNKLEVSSLDGKKRK-VLYWEDI---DQPRAIALVPQDSIMFWTDWGE---VPKIERGAMNG------DPRHRKV 257 (395)
Q Consensus 196 -----~~~I~v~~ldg~~~~-~l~~~~~---~~P~~iavdp~~g~LYwtd~~~---~~~I~~~~~dG------~~~~~~~ 257 (395)
..+|++.++.+.... .++.+.. ....+++++|++++|+++.+.. ...|+..++++ .....+.
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 235999999775532 3332332 2356899999999999887532 56899999874 1112334
Q ss_pred EEecCCcCceeEEEeccccEEEEeccc---eeeeeeeccccc
Q psy13629 258 IVDSTIFWPNGIAIDFNNRLLYWIDGR---LTFIEVMDYDGY 296 (395)
Q Consensus 258 lv~~~~~~P~glalD~~~~rLYwaD~~---~~~I~~~~~dG~ 296 (395)
+....- ...-.++.++++||+.... ..+|..+++++.
T Consensus 282 l~~~~~--~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 282 LIDNFE--GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp EECSSS--SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred eeCCCC--cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 433221 1222456668888877432 346888887654
No 243
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.87 E-value=0.29 Score=46.57 Aligned_cols=177 Identities=10% Similarity=-0.008 Sum_probs=105.5
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC---C------------
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN---G------------ 173 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~---~------------ 173 (395)
.|++.++........+......+.+++|++.++.|+... .++.|..+++... .....+.. .
T Consensus 162 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~ 237 (420)
T 3vl1_A 162 QLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS-LDGTIRLWECGTG---TTIHTFNRKENPHDGVNSIALFVG 237 (420)
T ss_dssp EEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTT---EEEEEECBTTBTTCCEEEEEEEEC
T ss_pred eEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEeECCCC---ceeEEeecCCCCCCCccEEEEecC
Confidence 688888876445555566677899999999888777554 7788999988754 22222211 1
Q ss_pred ---------CCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEec-CCCCceeEEEeCCCC-eEEEEeeCCCCe
Q psy13629 174 ---------LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-DIDQPRAIALVPQDS-IMFWTDWGEVPK 242 (395)
Q Consensus 174 ---------~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~-~~~~P~~iavdp~~g-~LYwtd~~~~~~ 242 (395)
......+++++. +++.++-...+.|.+.++........+.. .......++++|... +|+... ....
T Consensus 238 ~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~--~dg~ 314 (420)
T 3vl1_A 238 TDRQLHEISTSKKNNLEFGTY-GKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY--ENGM 314 (420)
T ss_dssp CCSSCGGGCCCCCCTTCSSCT-TEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE--TTSE
T ss_pred CcceeeecccCcccceEEcCC-CCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe--CCCe
Confidence 122334445553 44445555678899999987665544433 345688999999887 555443 3567
Q ss_pred EEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 243 IERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 243 I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
|...++.........+...+-.....+... .++++++-..++.|..-++.
T Consensus 315 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 315 LAQWDLRSPECPVGEFLINEGTPINNVYFA--AGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp EEEEETTCTTSCSEEEEESTTSCEEEEEEE--TTEEEEEETTTEEEEEEEEC
T ss_pred EEEEEcCCCcCchhhhhccCCCCceEEEeC--CCCEEEEecCCccEEEEecc
Confidence 888888752121233333222233444433 33444444445555554443
No 244
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.85 E-value=0.041 Score=53.60 Aligned_cols=179 Identities=15% Similarity=0.043 Sum_probs=108.5
Q ss_pred EEEEeeCCCCCccEEe--cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCC--CCCcceEEEec
Q psy13629 109 DIRIANLSRPLKPVTI--IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG--LITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~--~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~--~~~p~glAVD~ 184 (395)
.|++.++......... ......+.+|+|++.++.++.+...+++|...++++. ....+.... ......+++++
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~ 219 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN---ILRVFASSDTINIWFCSLDVSA 219 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC---EEEEEECCSSCSCCCCCEEEET
T ss_pred EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC---ceeEEeccCCCCccEEEEEECC
Confidence 6888888763333222 2345678999999865556667778899999999875 233333322 23356788887
Q ss_pred CCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEE-ecCC
Q psy13629 185 LTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIV-DSTI 263 (395)
Q Consensus 185 ~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv-~~~~ 263 (395)
.+. +.++-...+.|.+.+++++....+. .......+++++|....++.+-.. ...|...++........... ..+.
T Consensus 220 ~~~-~l~~g~~dg~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~-d~~v~iwd~~~~~~~~~~~~~~~h~ 296 (435)
T 4e54_B 220 SSR-MVVTGDNVGNVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLATASV-DQTVKIWDLRQVRGKASFLYSLPHR 296 (435)
T ss_dssp TTT-EEEEECSSSBEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEET-TSBCCEEETTTCCSSSCCSBCCBCS
T ss_pred CCC-EEEEEeCCCcEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEEecC-cceeeEEecccccccceEEEeeecc
Confidence 554 4456667889999999887554432 334567899999988877766522 34455555543111111111 1233
Q ss_pred cCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 264 FWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 264 ~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
...+.+++++++..|..+. .++.|..-+..
T Consensus 297 ~~v~~~~~spdg~~l~s~~-~D~~i~iwd~~ 326 (435)
T 4e54_B 297 HPVNAACFSPDGARLLTTD-QKSEIRVYSAS 326 (435)
T ss_dssp SCEEECCBCTTSSEEEEEE-SSSCEEEEESS
T ss_pred ccccceeECCCCCeeEEEc-CCCEEEEEECC
Confidence 3456677776666665543 34555555543
No 245
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.82 E-value=0.24 Score=44.62 Aligned_cols=171 Identities=8% Similarity=-0.029 Sum_probs=106.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEc-CCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC-CCCCcceEEEecCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYY-KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-GLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~-~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~-~~~~p~glAVD~~~ 186 (395)
.|++.+ .+ ............+..+++.+ .++.++ +...++.|..++... ....... ....+..+++.+.+
T Consensus 125 ~i~~~d-~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~-----~~~~~~~~~~~~i~~~~~~~~~ 196 (313)
T 3odt_A 125 TAKVWK-EG-SLVYNLQAHNASVWDAKVVSFSENKFL-TASADKTIKLWQNDK-----VIKTFSGIHNDVVRHLAVVDDG 196 (313)
T ss_dssp EEEEEE-TT-EEEEEEECCSSCEEEEEEEETTTTEEE-EEETTSCEEEEETTE-----EEEEECSSCSSCEEEEEEEETT
T ss_pred CEEEEc-CC-cEEEecccCCCceeEEEEccCCCCEEE-EEECCCCEEEEecCc-----eEEEEeccCcccEEEEEEcCCC
Confidence 566666 22 33444455667788999988 555554 444778888887332 2222322 45667889988744
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
. +++-...+.|.+.++........+........+++++|.+ +|+... ....|...++.. ......+..+....
T Consensus 197 -~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~--~dg~v~iwd~~~--~~~~~~~~~~~~~i 269 (313)
T 3odt_A 197 -H-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCG--EDRTVRIWSKEN--GSLKQVITLPAISI 269 (313)
T ss_dssp -E-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEE--TTSEEEEECTTT--CCEEEEEECSSSCE
T ss_pred -e-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEe--cCCEEEEEECCC--CceeEEEeccCceE
Confidence 4 4566677899999998666655554556778999999976 554333 357788888865 33333334444456
Q ss_pred eeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
..+++.+.+. +. +-...+.|..-+++..
T Consensus 270 ~~~~~~~~~~-~~-~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 270 WSVDCMSNGD-II-VGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEEEECTTSC-EE-EEETTSCEEEEESCGG
T ss_pred EEEEEccCCC-EE-EEeCCCcEEEEeCCCC
Confidence 7788876554 33 3334556655555443
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.81 E-value=0.11 Score=47.79 Aligned_cols=170 Identities=11% Similarity=0.067 Sum_probs=101.6
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.+..++.++ ..............++..+.. +.||+.. ..+.|++++.+|. ..............+++|. .++
T Consensus 118 ~l~~~d~~g-~~~~~~~~~~~~~~~~~~~~~-g~l~vgt-~~~~l~~~d~~g~----~~~~~~~~~~~~~~~~~d~-~g~ 189 (330)
T 3hxj_A 118 HLYAINTDG-TEKWRFKTKKAIYATPIVSED-GTIYVGS-NDNYLYAINPDGT----EKWRFKTNDAITSAASIGK-DGT 189 (330)
T ss_dssp EEEEECTTS-CEEEEEECSSCCCSCCEECTT-SCEEEEC-TTSEEEEECTTSC----EEEEEECSSCCCSCCEECT-TCC
T ss_pred EEEEEcCCC-CEEEEEcCCCceeeeeEEcCC-CEEEEEc-CCCEEEEECCCCC----EeEEEecCCCceeeeEEcC-CCE
Confidence 456666653 222222222233445566654 4466554 5678999888853 2222223334567788885 678
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
||++. +.|.+++.+|....... .......++++++ +|.||++.. ...|.+.+.+| ... .-.......+..
T Consensus 190 l~v~t---~~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~v~t~--~~gl~~~~~~g--~~~-~~~~~~~~~~~~ 259 (330)
T 3hxj_A 190 IYFGS---DKVYAINPDGTEKWNFY-AGYWTVTRPAISE-DGTIYVTSL--DGHLYAINPDG--TEK-WRFKTGKRIESS 259 (330)
T ss_dssp EEEES---SSEEEECTTSCEEEEEC-CSSCCCSCCEECT-TSCEEEEET--TTEEEEECTTS--CEE-EEEECSSCCCSC
T ss_pred EEEEe---CEEEEECCCCcEEEEEc-cCCcceeceEECC-CCeEEEEcC--CCeEEEECCCC--CEe-EEeeCCCCcccc
Confidence 88887 78999996665543332 3345678899986 568888763 35688887766 322 222333334556
Q ss_pred EEEeccccEEEEeccceeeeeeecccccee
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
+.+| .+++||++... +.|.+++.+|...
T Consensus 260 ~~~~-~~g~l~v~t~~-ggl~~~d~~g~~~ 287 (330)
T 3hxj_A 260 PVIG-NTDTIYFGSYD-GHLYAINPDGTEK 287 (330)
T ss_dssp CEEC-TTSCEEEECTT-CEEEEECTTSCEE
T ss_pred ceEc-CCCeEEEecCC-CCEEEECCCCcEE
Confidence 7777 56788888753 4677777765543
No 247
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.81 E-value=0.072 Score=50.19 Aligned_cols=164 Identities=8% Similarity=-0.005 Sum_probs=103.8
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCC--eEEEEeCCCCeEEEEEC
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE--KLYWTDSETNKLEVSSL 204 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~--~LYwtd~~~~~I~v~~l 204 (395)
....+.+++|.+.++.++++...++.|..++++.. ...... ........+++.+... .+.++-...+.|.+.++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL---QTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT---EEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC---ccceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 56678999999955556666667899999999875 222222 2334566777766533 35555566789999999
Q ss_pred CCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEE--------------ecCCcCceeEE
Q psy13629 205 DGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIV--------------DSTIFWPNGIA 270 (395)
Q Consensus 205 dg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv--------------~~~~~~P~gla 270 (395)
........+........+++++|...+++++- +....|...++.........+- ..+......++
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATA-SADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEE-ETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEE-cCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 87665555544556788999999888766554 3345677777754211111110 12334577888
Q ss_pred EeccccEEEEeccceeeeeeeccccc
Q psy13629 271 IDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 271 lD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
+++.+..|+.+. ..+.|...++...
T Consensus 253 ~~~~~~~l~~~~-~dg~i~vwd~~~~ 277 (408)
T 4a11_B 253 FTSDGLHLLTVG-TDNRMRLWNSSNG 277 (408)
T ss_dssp ECTTSSEEEEEE-TTSCEEEEETTTC
T ss_pred EcCCCCEEEEec-CCCeEEEEECCCC
Confidence 887766666654 3456666665543
No 248
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.79 E-value=0.28 Score=44.20 Aligned_cols=177 Identities=8% Similarity=-0.023 Sum_probs=105.0
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++...............+.+++|++.++.|+... .++.|..+++.....................++.+ ++.
T Consensus 40 ~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~ 116 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG-KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGV 116 (313)
T ss_dssp EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTE
T ss_pred cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-CCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CCE
Confidence 577778766333444555677889999999888777665 67888888876542111122233333455666664 444
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeC-CCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVP-QDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp-~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
| ++-...+.|.+.+ .+..... +.........+++.| ....|+.+. ....|...+.. .....+...+.....
T Consensus 117 l-~~~~~d~~i~~~d-~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~i~i~d~~---~~~~~~~~~~~~~i~ 188 (313)
T 3odt_A 117 V-ISGSWDKTAKVWK-EGSLVYN-LQAHNASVWDAKVVSFSENKFLTAS--ADKTIKLWQND---KVIKTFSGIHNDVVR 188 (313)
T ss_dssp E-EEEETTSEEEEEE-TTEEEEE-EECCSSCEEEEEEEETTTTEEEEEE--TTSCEEEEETT---EEEEEECSSCSSCEE
T ss_pred E-EEEeCCCCEEEEc-CCcEEEe-cccCCCceeEEEEccCCCCEEEEEE--CCCCEEEEecC---ceEEEEeccCcccEE
Confidence 4 4555678899998 3333333 334566778888888 455554443 24556666622 233333332455677
Q ss_pred eEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 268 GIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 268 glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
.+++...+. +++-...+.|...+++....
T Consensus 189 ~~~~~~~~~--~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 189 HLAVVDDGH--FISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp EEEEEETTE--EEEEETTSEEEEEETTTCCE
T ss_pred EEEEcCCCe--EEEccCCCeEEEEECCchhh
Confidence 788875544 44444566777777654333
No 249
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.79 E-value=0.066 Score=49.79 Aligned_cols=135 Identities=8% Similarity=-0.007 Sum_probs=87.0
Q ss_pred CCeEEEEEEcCCCEEEEEEC--------CCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeC----CC
Q psy13629 129 EEGAAIDYYYKKSMVCWTDH--------GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDS----ET 196 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~--------~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~----~~ 196 (395)
..+.+.++ ++++|+|+-. ....|+.+++++. ....+ .....+++.+.++.|+++.. ..
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~---~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNN---ARRFI-----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTC---CEEEE-----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCC---ceEEc-----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 33455556 5666766521 1456888888875 22333 45677899988888888763 23
Q ss_pred CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeC-------------------------CCCeEEEEecCCC
Q psy13629 197 NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWG-------------------------EVPKIERGAMNGD 251 (395)
Q Consensus 197 ~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~-------------------------~~~~I~~~~~dG~ 251 (395)
..|.+.++++...+.+..... ..+++.+|+++.|+++... ....|++.++++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~- 161 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES- 161 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT-
T ss_pred ceEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC-
Confidence 469999999877666653332 8899999999888887521 135788899876
Q ss_pred Ccce-EEEEecCCcCceeEEEeccccEEEEe
Q psy13629 252 PRHR-KVIVDSTIFWPNGIAIDFNNRLLYWI 281 (395)
Q Consensus 252 ~~~~-~~lv~~~~~~P~glalD~~~~rLYwa 281 (395)
... +.+.. . ....+++.+++ .+|.+
T Consensus 162 -~~~~~~l~~-~--~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 162 -EEVIEEFEK-P--RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp -TEEEEEEEE-E--TTCEEEEETTE-EEEEE
T ss_pred -CeEEeeecC-C--CcccccCCCCe-EEEEE
Confidence 333 34433 2 45667777555 44444
No 250
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.73 E-value=0.21 Score=46.85 Aligned_cols=167 Identities=7% Similarity=-0.060 Sum_probs=101.1
Q ss_pred EEEEeeCCCCCcc--EEe-cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC
Q psy13629 109 DIRIANLSRPLKP--VTI-IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~~~--~~~-~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~ 185 (395)
.|++.++.+.... ... ......+.+++|++.++.|.-.. .++.|...+.+.... .....+........++++.+.
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s-~D~~v~iw~~~~~~~-~~~~~~~~h~~~v~~v~~sp~ 116 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS-FDATTCIWKKNQDDF-ECVTTLEGHENEVKSVAWAPS 116 (345)
T ss_dssp CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEECCC-E-EEEEEECCCSSCEEEEEECTT
T ss_pred eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE-CCCcEEEEEccCCCe-EEEEEccCCCCCceEEEEeCC
Confidence 5777777652211 112 33556789999999888766554 677888888765421 111222333456788999885
Q ss_pred CCeEEEEeCCCCeEEEEECCCCceE---EEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceE--EEEe
Q psy13629 186 TEKLYWTDSETNKLEVSSLDGKKRK---VLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRK--VIVD 260 (395)
Q Consensus 186 ~~~LYwtd~~~~~I~v~~ldg~~~~---~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~--~lv~ 260 (395)
++. ..+-...+.|.+.+++..... ..+.........++++|...+|..... ...|...+... .... ..+.
T Consensus 117 ~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--d~~i~~w~~~~--~~~~~~~~~~ 191 (345)
T 3fm0_A 117 GNL-LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY--DDTVKLYREEE--DDWVCCATLE 191 (345)
T ss_dssp SSE-EEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET--TSCEEEEEEET--TEEEEEEEEC
T ss_pred CCE-EEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC--CCcEEEEEecC--CCEEEEEEec
Confidence 544 456566788999998765332 223234556789999998777765543 34455555544 2211 2233
Q ss_pred cCCcCceeEEEeccccEEEEec
Q psy13629 261 STIFWPNGIAIDFNNRLLYWID 282 (395)
Q Consensus 261 ~~~~~P~glalD~~~~rLYwaD 282 (395)
.+......++++++++.|..+.
T Consensus 192 ~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 192 GHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEe
Confidence 3455678889987776665443
No 251
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.71 E-value=0.27 Score=45.38 Aligned_cols=161 Identities=6% Similarity=-0.024 Sum_probs=103.2
Q ss_pred CCCCeEEEEEEcC----CCEEEEEECCCCeEEEEEccCCCCCceEEEE--eC--CCCCcceEEEecCC---CeEEEEeCC
Q psy13629 127 DLEEGAAIDYYYK----KSMVCWTDHGTEMISCCTFDGNNVGSKHNVI--TN--GLITPDGLAIDWLT---EKLYWTDSE 195 (395)
Q Consensus 127 ~~~~~~gl~~d~~----~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~--~~--~~~~p~glAVD~~~---~~LYwtd~~ 195 (395)
....+.+++|++. ...++.+. ..+.|..++..... ....+. .. .......+++.+.. +.+.++-..
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~-~~~~v~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATV-GSNRVTLYECHSQG--EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEE-ETTEEEEEEECGGG--CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred CCCceEEEEEecccCCCCceEEEEC-CCCEEEEEEcCCCc--EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4567899999983 45555555 56688888887432 112221 11 22457788888753 456666667
Q ss_pred CCeEEEEECCCCceEEEEecCCCCceeEEEeC-CCCeEEEEeeCCCCeEEEEecCCCCcceEEEE---ecCCcCceeEEE
Q psy13629 196 TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVP-QDSIMFWTDWGEVPKIERGAMNGDPRHRKVIV---DSTIFWPNGIAI 271 (395)
Q Consensus 196 ~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp-~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv---~~~~~~P~glal 271 (395)
.+.|.+.++........+........+++++| ...+|+... ....|...++.. ......+ ..+......+++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~--~~~~~~~~~~~~~~~~v~~~~~ 169 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVS--KDHALRLWNIQT--DTLVAIFGGVEGHRDEVLSADY 169 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEE--TTSCEEEEETTT--TEEEEEECSTTSCSSCEEEEEE
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEe--CCCeEEEEEeec--CeEEEEecccccccCceeEEEE
Confidence 88999999987666555545667889999999 444454433 356688888875 2333333 234557888899
Q ss_pred eccccEEEEeccceeeeeeecccc
Q psy13629 272 DFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 272 D~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
++.++.|+.+. ..+.|...+++.
T Consensus 170 ~~~~~~l~~~~-~dg~i~i~d~~~ 192 (366)
T 3k26_A 170 DLLGEKIMSCG-MDHSLKLWRINS 192 (366)
T ss_dssp CTTSSEEEEEE-TTSCEEEEESCS
T ss_pred CCCCCEEEEec-CCCCEEEEECCC
Confidence 87777666554 346676666654
No 252
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.67 E-value=0.2 Score=52.11 Aligned_cols=180 Identities=13% Similarity=-0.004 Sum_probs=105.6
Q ss_pred EEEEEeeCCCCCcc-EEecCCCCCeEEEEEEcCCCEEEEEECC------------CCeEEEEEccCCCCCceEEEEeCCC
Q psy13629 108 LDIRIANLSRPLKP-VTIIKDLEEGAAIDYYYKKSMVCWTDHG------------TEMISCCTFDGNNVGSKHNVITNGL 174 (395)
Q Consensus 108 ~~I~~~~l~~~~~~-~~~~~~~~~~~gl~~d~~~~~lywsd~~------------~~~I~~~~~dg~~~~~~~~i~~~~~ 174 (395)
.+|+++++++.... .......+ ..+++|+++++.||++... ...|++.++.+.. ....++....
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~--~~~~lv~~~~ 223 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIEGGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP--SKDTVVHERT 223 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBSCCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG--GGCEEEECCC
T ss_pred EEEEEEECCCCCCcCCcccCccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc--hhceEEEecC
Confidence 37888999873322 11122221 2678999999999998742 2349999988652 1123333322
Q ss_pred ---CCcceEEEecCCCeEEEEeCC---CCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEE-EeeC-CCCeEEEE
Q psy13629 175 ---ITPDGLAIDWLTEKLYWTDSE---TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFW-TDWG-EVPKIERG 246 (395)
Q Consensus 175 ---~~p~glAVD~~~~~LYwtd~~---~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYw-td~~-~~~~I~~~ 246 (395)
....++++.+.++.|+++... ...|.+.+..+...+.+... .......+. +.++ +|+ +++. ...+|.++
T Consensus 224 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~-~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 224 GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKG-VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEEC-SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecC-CCceEEEEe-cCCc-EEEEECCCCCCCEEEEE
Confidence 234578888888888776532 34788887755555555533 223333333 5566 555 4443 46889999
Q ss_pred ecCCCCcc---eEEEEecC-CcCceeEEEeccccEEEEecc--ceeeeeeeccccce
Q psy13629 247 AMNGDPRH---RKVIVDST-IFWPNGIAIDFNNRLLYWIDG--RLTFIEVMDYDGYV 297 (395)
Q Consensus 247 ~~dG~~~~---~~~lv~~~-~~~P~glalD~~~~rLYwaD~--~~~~I~~~~~dG~~ 297 (395)
++++ .. -+.++... -....+++++ +++|+++-. ...+|..++++|..
T Consensus 301 d~~~--~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~ 353 (695)
T 2bkl_A 301 DPAK--PARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKP 353 (695)
T ss_dssp BTTB--CSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCE
T ss_pred eCCC--CCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCe
Confidence 9976 23 24555432 2234556665 667776643 34566777776653
No 253
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.66 E-value=0.1 Score=48.31 Aligned_cols=137 Identities=7% Similarity=-0.078 Sum_probs=91.8
Q ss_pred EEEEeeCCCCCccEEecC-----CCCCeEEEEEEcCC---CEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceE
Q psy13629 109 DIRIANLSRPLKPVTIIK-----DLEEGAAIDYYYKK---SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGL 180 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~-----~~~~~~gl~~d~~~---~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~gl 180 (395)
.|++.++........+.. ....+.+++|.+.. +.++++...++.|..++++.. .....+......+.++
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM---QCIKHYVGHGNAINEL 121 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC---CEEEEEESCCSCEEEE
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc---eEeeeecCCCCcEEEE
Confidence 567777664222222211 33668999999884 345566668889999998865 3333444455678899
Q ss_pred EEecCCCeEEEEeCCCCeEEEEECCCCceEEEE---ecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 181 AIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLY---WEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 181 AVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~---~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
++.+.++++.++-...+.|.+.++........+ ......+.+++++|...+|+.+. ....|...++..
T Consensus 122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~ 192 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG--MDHSLKLWRINS 192 (366)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE--TTSCEEEEESCS
T ss_pred EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEec--CCCCEEEEECCC
Confidence 998845555566666889999999877665555 24466789999999877776654 245677777654
No 254
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.63 E-value=0.16 Score=46.84 Aligned_cols=180 Identities=11% Similarity=-0.025 Sum_probs=107.4
Q ss_pred EEEEeeCCCCC-ccEEecCCCCCeEEEEE------EcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCC---CCCcc
Q psy13629 109 DIRIANLSRPL-KPVTIIKDLEEGAAIDY------YYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG---LITPD 178 (395)
Q Consensus 109 ~I~~~~l~~~~-~~~~~~~~~~~~~gl~~------d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~---~~~p~ 178 (395)
.|++.++.... ....+......+.+++| ++.++.|+.. ..++.|..+++..... ....+.... .....
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~-~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTG-SRDGTVKVWDPRQKDD-PVANMEPVQGENKRDCW 168 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEE-ETTSCEEEECTTSCSS-CSEEECCCTTSCCCCEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEE-eCCCeEEEEeCCCCCC-cceeccccCCCCCCceE
Confidence 57888887644 44555556677888866 4556665544 4788899998876421 112221111 12445
Q ss_pred eEE----EecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeC---CCCeEEEEeeCCCCeEEEEecCCC
Q psy13629 179 GLA----IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVP---QDSIMFWTDWGEVPKIERGAMNGD 251 (395)
Q Consensus 179 glA----VD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp---~~g~LYwtd~~~~~~I~~~~~dG~ 251 (395)
.++ +++ .+++.++-...+.|.+.++......... ........++++| ..++|+.+. ....|...++...
T Consensus 169 ~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 169 TVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWET-NIKNGVCSLEFDRKDISMNKLVATS--LEGKFHVFDMRTQ 244 (357)
T ss_dssp EEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEESCSSSSCCEEEEEE--STTEEEEEEEEEE
T ss_pred EEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeec-CCCCceEEEEcCCCCCCCCEEEEEC--CCCeEEEEeCcCC
Confidence 555 344 4445555556789999999887765444 4456789999999 667776654 2456766666541
Q ss_pred CcceEE---EEecCCcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 252 PRHRKV---IVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 252 ~~~~~~---lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
...... ....+......+++.+.+..++++-...+.|..-+++
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred CcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 111111 1123445677888886666466665556666665554
No 255
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.61 E-value=0.12 Score=53.93 Aligned_cols=181 Identities=9% Similarity=0.044 Sum_probs=107.5
Q ss_pred EEEEeeCCCCC-ccEEecCCC----CCeEEEEEEcCCCEEEEEECC---CCeEEEEEccCCCCCceEEEEeCCCCCcceE
Q psy13629 109 DIRIANLSRPL-KPVTIIKDL----EEGAAIDYYYKKSMVCWTDHG---TEMISCCTFDGNNVGSKHNVITNGLITPDGL 180 (395)
Q Consensus 109 ~I~~~~l~~~~-~~~~~~~~~----~~~~gl~~d~~~~~lywsd~~---~~~I~~~~~dg~~~~~~~~i~~~~~~~p~gl 180 (395)
.|.+.++.... ....+.... ....++.++++++.|+++... .+.|+..++++... ....+. .....-...
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~-~~~~l~-~~~~~~~~~ 286 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA-PLLTVQ-GDLDADVSL 286 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC-CCEEEE-CSSSSCEEE
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC-ceEEEe-CCCCceEEE
Confidence 46666665422 223343332 236789999999999877542 35899999876421 123333 222222222
Q ss_pred EEecCCCeEEEEeCC---CCeEEEEECCCCce---EEEEecCCCCceeEEEeCCCCeEEEEeeC-CCCeEEEEecCCCCc
Q psy13629 181 AIDWLTEKLYWTDSE---TNKLEVSSLDGKKR---KVLYWEDIDQPRAIALVPQDSIMFWTDWG-EVPKIERGAMNGDPR 253 (395)
Q Consensus 181 AVD~~~~~LYwtd~~---~~~I~v~~ldg~~~---~~l~~~~~~~P~~iavdp~~g~LYwtd~~-~~~~I~~~~~dG~~~ 253 (395)
+++.++.||+.... +.+|.++++++... +.++.+.... . .+++.+++|+++... ...+|...+++| .
T Consensus 287 -~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g--~ 360 (693)
T 3iuj_A 287 -VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV-L--TVHSGSGYLFAEYMVDATARVEQFDYEG--K 360 (693)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-E--EEEEETTEEEEEEEETTEEEEEEECTTS--C
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE-E--EEEEECCEEEEEEEECCeeEEEEEECCC--C
Confidence 56668888887533 57899999988654 5666443322 2 677778888887643 346899999998 4
Q ss_pred ceEEEEecCCcCceeEEEeccccEEEEeccc---eeeeeeeccccce
Q psy13629 254 HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGR---LTFIEVMDYDGYV 297 (395)
Q Consensus 254 ~~~~lv~~~~~~P~glalD~~~~rLYwaD~~---~~~I~~~~~dG~~ 297 (395)
..+.+.......-.++..+.++++|+++-.. -..|...++++..
T Consensus 361 ~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 361 RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 4444332222233344555566777766322 2667788876543
No 256
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.61 E-value=0.065 Score=49.42 Aligned_cols=174 Identities=7% Similarity=-0.050 Sum_probs=107.6
Q ss_pred EEEEeeCCCCC---ccEEecCCCCCeEEEEEEcCCC-EEEEEECCCCeEEEEEc-cCCCCCceEEEEeC--CCCCcceEE
Q psy13629 109 DIRIANLSRPL---KPVTIIKDLEEGAAIDYYYKKS-MVCWTDHGTEMISCCTF-DGNNVGSKHNVITN--GLITPDGLA 181 (395)
Q Consensus 109 ~I~~~~l~~~~---~~~~~~~~~~~~~gl~~d~~~~-~lywsd~~~~~I~~~~~-dg~~~~~~~~i~~~--~~~~p~glA 181 (395)
.|++.++.... ...........+.+++|++.++ .|+... .++.|..+++ ++. . ...+.. ....+..++
T Consensus 34 ~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~---~-~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 34 SLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT-VQGEILKVDLIGSP---S-FQALTNNEANLGICRIC 108 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-TTSCEEEECSSSSS---S-EEECBSCCCCSCEEEEE
T ss_pred eEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc-CCCeEEEEEeccCC---c-eEeccccCCCCceEEEE
Confidence 57777776533 1344455667889999999888 676665 7789999998 764 2 233333 445678899
Q ss_pred EecCCCeEEEEeCCCCeEEEEECCC---------CceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC-C
Q psy13629 182 IDWLTEKLYWTDSETNKLEVSSLDG---------KKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG-D 251 (395)
Q Consensus 182 VD~~~~~LYwtd~~~~~I~v~~ldg---------~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG-~ 251 (395)
+.+ ++.| ++-...+.|.+.++.. ......+ .....+.+++++|.. |+.+. ....|...++.. .
T Consensus 109 ~~~-~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~--l~~~~--~d~~i~i~d~~~~~ 181 (342)
T 1yfq_A 109 KYG-DDKL-IAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-KVKNKIFTMDTNSSR--LIVGM--NNSQVQWFRLPLCE 181 (342)
T ss_dssp EET-TTEE-EEEETTSEEEEECHHHHTTBCEEEEESCSSSS-SSCCCEEEEEECSSE--EEEEE--STTEEEEEESSCCT
T ss_pred eCC-CCEE-EEEcCCCeEEEEcccccccccccccCCeeeEE-eeCCceEEEEecCCc--EEEEe--CCCeEEEEECCccc
Confidence 998 5555 4555678899998764 2211111 234567888998754 55443 245788888765 2
Q ss_pred CcceEEEEecCCcCceeEEEec-cccEEEEeccceeeeeeecccc
Q psy13629 252 PRHRKVIVDSTIFWPNGIAIDF-NNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 252 ~~~~~~lv~~~~~~P~glalD~-~~~rLYwaD~~~~~I~~~~~dG 295 (395)
...........-..+..+++.+ .++.|+.+. ..+.|...+++.
T Consensus 182 ~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~ 225 (342)
T 1yfq_A 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSS-IDGRVAVEFFDD 225 (342)
T ss_dssp TCCCEEEECSCSSCEEEEEECSGGGCEEEEEE-TTSEEEEEECCT
T ss_pred cccceeeecCCCCceeEEEECCCCCCEEEEEe-cCCcEEEEEEcC
Confidence 1222333333444678888886 555555444 456666544443
No 257
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.34 Score=45.12 Aligned_cols=161 Identities=9% Similarity=-0.002 Sum_probs=99.6
Q ss_pred CCCCCeEEEEEEc--CCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CCCCCcceEEEecCCCeEEEEeCCCCeEEEE
Q psy13629 126 KDLEEGAAIDYYY--KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSETNKLEVS 202 (395)
Q Consensus 126 ~~~~~~~gl~~d~--~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~ 202 (395)
.....+.++++++ .++.+. +...++.|..++++.. ....+.. ........+++++ .+.+..+-...+.|.+.
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~-s~s~dg~i~~wd~~~~---~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFI-WADNRGTIGFQSYEDD---SQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVY 197 (343)
T ss_dssp CCSSCEEEEECCC---CCEEE-EEETTCCEEEEESSSS---CEEEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEE
T ss_pred CCCCCEEEEEcCCCCCCCEEE-EEeCCCcEEEEECCCC---cEEEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEEEE
Confidence 3345689999998 666554 4447889999999865 2222222 2233578999998 45566666678999999
Q ss_pred ECCCCceE-EEEec-CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe--cCCcCc--eeEEEecccc
Q psy13629 203 SLDGKKRK-VLYWE-DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD--STIFWP--NGIAIDFNNR 276 (395)
Q Consensus 203 ~ldg~~~~-~l~~~-~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~--~~~~~P--~glalD~~~~ 276 (395)
++...... ..+.. .......++++|...+|..+. . . .|...++... .....+-. .+.... ..+++++.++
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-~-~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D-Q-TVVCFDLRKD-VGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S-S-BEEEEETTSS-TTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C-C-eEEEEEcCCC-CcceeecccccccccccceEEEECCCCC
Confidence 99876654 33323 356789999999877777665 3 2 7888888652 11111110 010111 3488998888
Q ss_pred EEEEeccceeeeeeecccc
Q psy13629 277 LLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 277 rLYwaD~~~~~I~~~~~dG 295 (395)
.|..+....+.|...+++.
T Consensus 274 ~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 274 NMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EEEEEETTTTEEEEEEECT
T ss_pred EEEEecCCCCcEEEEEEcc
Confidence 7777444345565555543
No 258
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.55 E-value=0.23 Score=51.79 Aligned_cols=184 Identities=11% Similarity=0.108 Sum_probs=108.5
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECC------------CCeEEEEEccCCCCCceEEEEeCCCC
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHG------------TEMISCCTFDGNNVGSKHNVITNGLI 175 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~------------~~~I~~~~~dg~~~~~~~~i~~~~~~ 175 (395)
.+|+++++.+........+.. ...+++|. +++.||++... ...|++..+.... ....++.....
T Consensus 155 ~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~--~~~~~v~~~~~ 230 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLKDV-KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQ--EDDRLVFGAIP 230 (693)
T ss_dssp EEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCG--GGCEEEESCSG
T ss_pred EEEEEEECCCCCCCccccCCc-eeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCc--ccceEEEecCC
Confidence 478899998743222222211 12467888 88888888543 2468888876542 11233333222
Q ss_pred ----CcceEEEecCCCeEEEEeC---CCCeEEEEECCCC--ceEEEEecCCCCceeEEEeCCCCeEEEEeeC--CCCeEE
Q psy13629 176 ----TPDGLAIDWLTEKLYWTDS---ETNKLEVSSLDGK--KRKVLYWEDIDQPRAIALVPQDSIMFWTDWG--EVPKIE 244 (395)
Q Consensus 176 ----~p~glAVD~~~~~LYwtd~---~~~~I~v~~ldg~--~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~--~~~~I~ 244 (395)
.-.++++.+.++.|+++.. ..+.|++.++++. ..+.+. .....-... +++.++.||+.... ...+|.
T Consensus 231 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~-~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~ 308 (693)
T 3iuj_A 231 AQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ-GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLV 308 (693)
T ss_dssp GGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE-CSSSSCEEE-EEEETTEEEEEECTTCTTCEEE
T ss_pred CCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe-CCCCceEEE-EeccCCEEEEEECCCCCCCEEE
Confidence 2347788888888877653 2358999998765 334444 332222222 66778888877543 257899
Q ss_pred EEecCCCCc-ceEEEEecCCcCceeEEEeccccEEEEecc--ceeeeeeeccccceeee
Q psy13629 245 RGAMNGDPR-HRKVIVDSTIFWPNGIAIDFNNRLLYWIDG--RLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 245 ~~~~dG~~~-~~~~lv~~~~~~P~glalD~~~~rLYwaD~--~~~~I~~~~~dG~~~~~ 300 (395)
++++++... +-+.++...-.. +.++.+++.|+++-. ...+|...+++|.....
T Consensus 309 ~~d~~~~~~~~~~~l~~~~~~~---~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 309 TVDAANPGPAHWRDLIPERQQV---LTVHSGSGYLFAEYMVDATARVEQFDYEGKRVRE 364 (693)
T ss_dssp EEETTSCCGGGCEEEECCCSSC---EEEEEETTEEEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEeCCCCCccccEEEecCCCCE---EEEEEECCEEEEEEEECCeeEEEEEECCCCeeEE
Confidence 999987311 114555443222 255555788877643 34578888888765443
No 259
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.54 E-value=0.37 Score=46.63 Aligned_cols=161 Identities=6% Similarity=-0.018 Sum_probs=100.8
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.+++|++.++.|+... .++.|..++++.. .....+......+..++++ . .
T Consensus 291 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~--~-~ 363 (464)
T 3v7d_B 291 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISAS-MDTTIRIWDLENG---ELMYTLQGHTALVGLLRLS--D-K 363 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTT---EEEEEECCCSSCEEEEEEC--S-S
T ss_pred eEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCC---cEEEEEeCCCCcEEEEEEc--C-C
Confidence 677888766333334444567789999999888776554 7889999998764 2233333344556667765 3 4
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
..++-...+.|.+.++....+.... ........+++++.+.+|.... ...|...++... .........+......
T Consensus 364 ~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~---dg~i~iwd~~~g-~~~~~~~~~~~~~v~~ 438 (464)
T 3v7d_B 364 FLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS---ENQFNIYNLRSG-KLVHANILKDADQIWS 438 (464)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE---TTEEEEEETTTC-CEEESCTTTTCSEEEE
T ss_pred EEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec---CCeEEEEECCCC-cEEehhhccCCCcEEE
Confidence 4456566789999999876655444 3445566788888777666544 467888887641 1111112223334555
Q ss_pred EEEeccccEEEEecc
Q psy13629 269 IAIDFNNRLLYWIDG 283 (395)
Q Consensus 269 lalD~~~~rLYwaD~ 283 (395)
++++ ++++..+-.
T Consensus 439 v~~~--~~~l~~~~~ 451 (464)
T 3v7d_B 439 VNFK--GKTLVAAVE 451 (464)
T ss_dssp EEEE--TTEEEEEEE
T ss_pred EEec--CCEEEEEEE
Confidence 5665 666666643
No 260
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.51 E-value=0.53 Score=43.84 Aligned_cols=180 Identities=8% Similarity=-0.062 Sum_probs=112.9
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCC-ceEEEEeCCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG-SKHNVITNGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~-~~~~i~~~~~~~p~glAVD~~~~ 187 (395)
.|++.++........+......+.+++|++.++.|.... .++.|..+++...... ...............++... .+
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~ 155 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG-LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DN 155 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEE-TTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TT
T ss_pred cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEe-CCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CC
Confidence 678888766344444445566788999999888776554 6788998888753211 11222233334556666654 34
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCce
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPN 267 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~ 267 (395)
.| .+-...+.|.+.++........+.........++++|...+|+ +- +....|...++.. ......+..+....+
T Consensus 156 ~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sg-~~d~~v~~wd~~~--~~~~~~~~~h~~~v~ 230 (340)
T 1got_B 156 QI-VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV-SG-ACDASAKLWDVRE--GMCRQTFTGHESDIN 230 (340)
T ss_dssp EE-EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EE-ETTSCEEEEETTT--CSEEEEECCCSSCEE
T ss_pred cE-EEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE-EE-eCCCcEEEEECCC--CeeEEEEcCCcCCEE
Confidence 44 4555678899999987766555544456788999999665554 43 2345677777765 233333344455678
Q ss_pred eEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 268 GIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 268 glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
.+++.+.++.|..+ ..++.|..-++...
T Consensus 231 ~v~~~p~~~~l~s~-s~d~~v~iwd~~~~ 258 (340)
T 1got_B 231 AICFFPNGNAFATG-SDDATCRLFDLRAD 258 (340)
T ss_dssp EEEECTTSSEEEEE-ETTSCEEEEETTTT
T ss_pred EEEEcCCCCEEEEE-cCCCcEEEEECCCC
Confidence 89998766655444 44566766666543
No 261
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.49 E-value=0.52 Score=43.52 Aligned_cols=165 Identities=9% Similarity=-0.000 Sum_probs=106.4
Q ss_pred cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEEC
Q psy13629 125 IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 204 (395)
Q Consensus 125 ~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~l 204 (395)
......+..++|.+.++.|+-. ..++.|...++... .....+.........+++++.+. +..+-...+.|.+.++
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~-s~D~~v~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSA-SWDKTLRLWDVATG---ETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTI 136 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTT---EEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEET
T ss_pred eCCcccEEEEEECCCCCEEEEE-eCCCEEEEEECCCC---CeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEC
Confidence 3455678889999988776644 47899999998765 33333444456678899988544 4456667789999999
Q ss_pred CCCceEEEEecCCCCceeEEEeCCC-----CeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEE
Q psy13629 205 DGKKRKVLYWEDIDQPRAIALVPQD-----SIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLY 279 (395)
Q Consensus 205 dg~~~~~l~~~~~~~P~~iavdp~~-----g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLY 279 (395)
.+.....+. ........+++.|.. +.++.+- +....|...++.. ......+..+....+.+++.+.++.|.
T Consensus 137 ~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~--~~~~~~~~~h~~~v~~~~~sp~g~~l~ 212 (319)
T 3frx_A 137 KGQCLATLL-GHNDWVSQVRVVPNEKADDDSVTIISA-GNDKMVKAWNLNQ--FQIEADFIGHNSNINTLTASPDGTLIA 212 (319)
T ss_dssp TSCEEEEEC-CCSSCEEEEEECCC------CCEEEEE-ETTSCEEEEETTT--TEEEEEECCCCSCEEEEEECTTSSEEE
T ss_pred CCCeEEEEe-ccCCcEEEEEEccCCCCCCCccEEEEE-eCCCEEEEEECCc--chhheeecCCCCcEEEEEEcCCCCEEE
Confidence 887655554 445567788888753 2244444 3356677777765 333333334455678888887666555
Q ss_pred Eeccceeeeeeeccccceee
Q psy13629 280 WIDGRLTFIEVMDYDGYVRL 299 (395)
Q Consensus 280 waD~~~~~I~~~~~dG~~~~ 299 (395)
.+. .++.|..-++......
T Consensus 213 s~~-~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 213 SAG-KDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEE-TTCEEEEEETTTTEEE
T ss_pred EEe-CCCeEEEEECCCCcEE
Confidence 443 4566777676554433
No 262
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.48 E-value=0.23 Score=52.17 Aligned_cols=183 Identities=10% Similarity=0.081 Sum_probs=107.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCC-------------CeEEEEEccCCCCCceEEEEeCCCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT-------------EMISCCTFDGNNVGSKHNVITNGLI 175 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~-------------~~I~~~~~dg~~~~~~~~i~~~~~~ 175 (395)
+|+++++++........... ...+++|+++ +.||++.... ..|++.++.+.. ....++.....
T Consensus 190 ~i~v~dl~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~--~~~~lv~~~~~ 265 (741)
T 1yr2_A 190 TVKFVGVADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQ--SADQPVFATPE 265 (741)
T ss_dssp EEEEEETTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCG--GGCEEEECCTT
T ss_pred EEEEEECCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCc--hhCEEEeccCC
Confidence 58889998743322211111 1246889999 8898886432 358888886542 11233433322
Q ss_pred ---CcceEEEecCCCeEEEEeC----CCCeEEEEECCCC--c-eEEEEecCCCCceeEEEeCCCCeEEEEeeC--CCCeE
Q psy13629 176 ---TPDGLAIDWLTEKLYWTDS----ETNKLEVSSLDGK--K-RKVLYWEDIDQPRAIALVPQDSIMFWTDWG--EVPKI 243 (395)
Q Consensus 176 ---~p~glAVD~~~~~LYwtd~----~~~~I~v~~ldg~--~-~~~l~~~~~~~P~~iavdp~~g~LYwtd~~--~~~~I 243 (395)
...++++.+.++.|+++.. ....|++.++++. . .+.+. .....-... ++|.++.||+.... ...+|
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI-PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKI 343 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE-CSSSSCEEE-EEEETTEEEEEECTTCTTCEE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec-CCCCceEEE-EeccCCEEEEEECCCCCCCEE
Confidence 2457888887877877653 3568999999876 4 44554 332222333 45778888877532 35789
Q ss_pred EEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEecc--ceeeeeeeccccceee
Q psy13629 244 ERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDG--RLTFIEVMDYDGYVRL 299 (395)
Q Consensus 244 ~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~--~~~~I~~~~~dG~~~~ 299 (395)
+++++++.....+.++...-....+++++ +++|+++-. ...+|..++++|....
T Consensus 344 ~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp EEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred EEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCcee
Confidence 99999862112344444332223445554 677777643 3456777777765433
No 263
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.48 E-value=0.19 Score=50.39 Aligned_cols=160 Identities=8% Similarity=-0.046 Sum_probs=102.8
Q ss_pred cCCCCCeEEEEEEcCCCEEEEEECCC---CeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEE
Q psy13629 125 IKDLEEGAAIDYYYKKSMVCWTDHGT---EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEV 201 (395)
Q Consensus 125 ~~~~~~~~gl~~d~~~~~lywsd~~~---~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v 201 (395)
......+.+++|++.++.|+...... +.|+.++ .. .....+......+..+++.+.++.+..+-...+.|.+
T Consensus 113 ~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~v 187 (615)
T 1pgu_A 113 QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SG---NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVF 187 (615)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TC---CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEE
T ss_pred hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CC---CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 33566789999999999888776432 3455444 22 2233333445668889999877656667777899999
Q ss_pred EECCCCceEEEEecCCC---CceeEEEeCC-CCeEEEEeeCCCCeEEEEecCCCCcceEEEE-e---cCCcCceeEEEec
Q psy13629 202 SSLDGKKRKVLYWEDID---QPRAIALVPQ-DSIMFWTDWGEVPKIERGAMNGDPRHRKVIV-D---STIFWPNGIAIDF 273 (395)
Q Consensus 202 ~~ldg~~~~~l~~~~~~---~P~~iavdp~-~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv-~---~~~~~P~glalD~ 273 (395)
.++........+..... ....++++|. ..+|+... ....|...++.. ......+ . .+......+++.
T Consensus 188 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~vwd~~~--~~~~~~~~~~~~~~~~~v~~~~~~- 262 (615)
T 1pgu_A 188 YQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG--SDRKISCFDGKS--GEFLKYIEDDQEPVQGGIFALSWL- 262 (615)
T ss_dssp EETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE--TTCCEEEEETTT--CCEEEECCBTTBCCCSCEEEEEES-
T ss_pred EeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEe--CCCeEEEEECCC--CCEeEEecccccccCCceEEEEEc-
Confidence 99887666555544444 6889999998 65665544 246688888764 2222222 2 344467778887
Q ss_pred cccEEEEeccceeeeeeecccc
Q psy13629 274 NNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 274 ~~~rLYwaD~~~~~I~~~~~dG 295 (395)
.+..|+.+. ..+.|...++..
T Consensus 263 ~~~~l~~~~-~d~~i~~wd~~~ 283 (615)
T 1pgu_A 263 DSQKFATVG-ADATIRVWDVTT 283 (615)
T ss_dssp SSSEEEEEE-TTSEEEEEETTT
T ss_pred CCCEEEEEc-CCCcEEEEECCC
Confidence 555555443 446666666553
No 264
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.40 E-value=0.65 Score=43.65 Aligned_cols=161 Identities=10% Similarity=0.031 Sum_probs=102.6
Q ss_pred ecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC-CCeEEEEeCCCCeEEEE
Q psy13629 124 IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL-TEKLYWTDSETNKLEVS 202 (395)
Q Consensus 124 ~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~-~~~LYwtd~~~~~I~v~ 202 (395)
+........+++|.+.++.|+-+. .++.|...+++.. .....+.........+++.+. .+++.++-...+.|.+.
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s-~D~~v~lwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTAS-GDGTCALWDVESG---QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTC---CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred eeccCCcEEEEEEeCCCCEEEEEe-CCCcEEEEeCCCC---eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 334556678999999888776544 7889999998765 223333333445667777664 34666677778899999
Q ss_pred ECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecC--CcCceeEEEeccccEEEE
Q psy13629 203 SLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDST--IFWPNGIAIDFNNRLLYW 280 (395)
Q Consensus 203 ~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~--~~~P~glalD~~~~rLYw 280 (395)
++........+.......++++++|....|.... ....|...++.. .......... ......+++.+.+..|+.
T Consensus 226 d~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s--~D~~v~lwd~~~--~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 226 DMRSGQCVQAFETHESDVNSVRYYPSGDAFASGS--DDATCRLYDLRA--DREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEe--CCCeEEEEECCC--CcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 9987766555544456788999999776665443 345677777765 2222222221 223567777766665555
Q ss_pred eccceeeeeeecc
Q psy13629 281 IDGRLTFIEVMDY 293 (395)
Q Consensus 281 aD~~~~~I~~~~~ 293 (395)
+. ..+.|..-++
T Consensus 302 g~-~d~~i~vwd~ 313 (354)
T 2pbi_B 302 GY-NDYTINVWDV 313 (354)
T ss_dssp EE-TTSCEEEEET
T ss_pred EE-CCCcEEEEEC
Confidence 43 3456666665
No 265
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.39 E-value=0.35 Score=53.46 Aligned_cols=166 Identities=9% Similarity=-0.062 Sum_probs=110.5
Q ss_pred EecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEE
Q psy13629 123 TIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVS 202 (395)
Q Consensus 123 ~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~ 202 (395)
.+......+.+++|++.++.|.... .++.|..++.... .....+......+.++++.+.++.|. +-...+.|.+.
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~-~d~~i~vw~~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~d~~v~vw 684 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCG-ADKTLQVFKAETG---EKLLDIKAHEDEVLCCAFSSDDSYIA-TCSADKKVKIW 684 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEE
T ss_pred EEecccccEEEEEECCCCCEEEEEe-CCCeEEEEECCCC---CEEEEeccCCCCEEEEEEecCCCEEE-EEeCCCeEEEE
Confidence 3445667789999999888776554 7889999998765 23333344456788999998666665 44467899999
Q ss_pred ECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEec
Q psy13629 203 SLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWID 282 (395)
Q Consensus 203 ~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD 282 (395)
++........+.........++++|..+..+..-.+....|...+++. ......+..+....+.+++.+.++.|..+.
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~--~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ--KECRNTMFGHTNSVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS--SSEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC--cchhheecCCCCCEEEEEEecCCCEEEEEE
Confidence 998776665555566778899999864433332223456788888876 333333444555678888987666555543
Q ss_pred cceeeeeeeccccc
Q psy13629 283 GRLTFIEVMDYDGY 296 (395)
Q Consensus 283 ~~~~~I~~~~~dG~ 296 (395)
..+.|..-++...
T Consensus 763 -~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 763 -ADGTLRLWDVRSA 775 (1249)
T ss_dssp -SSSEEEEEEGGGT
T ss_pred -CCCeEEEEeCCCC
Confidence 4456666665443
No 266
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.37 E-value=0.15 Score=53.45 Aligned_cols=186 Identities=12% Similarity=0.014 Sum_probs=108.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCC---------------
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG--------------- 173 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~--------------- 173 (395)
++.++++.+ .+...+..........+|++++++|.++. ++.|+..+.++.. ...+...+
T Consensus 93 ~~~~~d~~~-~~~~~l~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~---~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 93 SYDIYDLNK-RQLITEERIPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLP---SYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEEEEETTT-TEECCSSCCCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTSC---CEECCSCCBTTTEEESBCCHHHH
T ss_pred EEEEEECCC-CcEEEcccCCCcceeeEECCCCCEEEEEE--CCeEEEEECCCCc---eEEEcCCCCccceecCccccccc
Confidence 456788876 44444444456678899999999888774 4678888877652 22222221
Q ss_pred ---CCCcceEEEecCCCeEEEEe--CC---------------------------------CCeEEEEECCC---C---ce
Q psy13629 174 ---LITPDGLAIDWLTEKLYWTD--SE---------------------------------TNKLEVSSLDG---K---KR 209 (395)
Q Consensus 174 ---~~~p~glAVD~~~~~LYwtd--~~---------------------------------~~~I~v~~ldg---~---~~ 209 (395)
+....+++..+.++.|.++. .. ..+|.+.++++ . ..
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 12234578888777776652 11 01577888887 5 33
Q ss_pred EEEEec-----CCCCceeEEEeCCCCeEEEEeeCC--CCeEEEEecCCCC------cceEEEEecCCcC-----ceeEEE
Q psy13629 210 KVLYWE-----DIDQPRAIALVPQDSIMFWTDWGE--VPKIERGAMNGDP------RHRKVIVDSTIFW-----PNGIAI 271 (395)
Q Consensus 210 ~~l~~~-----~~~~P~~iavdp~~g~LYwtd~~~--~~~I~~~~~dG~~------~~~~~lv~~~~~~-----P~glal 271 (395)
..+... .......++.+|+++.++...... ...|..++.++.. ..++++...+-.| +...++
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 247 IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF 326 (740)
T ss_dssp EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE
T ss_pred EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE
Confidence 333210 223356678898876444333232 3468888887621 0122222333222 336677
Q ss_pred eccccEEE-Ee--ccceeeeeeeccccceeee
Q psy13629 272 DFNNRLLY-WI--DGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 272 D~~~~rLY-wa--D~~~~~I~~~~~dG~~~~~ 300 (395)
.++++.|+ |+ +.+...|+.++.+|...+.
T Consensus 327 spDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 327 TLDGNSFYKIISNEEGYRHICYFQIDKKDCTF 358 (740)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEETTCSSCEE
T ss_pred cCCCCEEEEEEEcCCCceEEEEEECCCCceEe
Confidence 77787776 66 2345778888888765544
No 267
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.36 E-value=0.27 Score=46.73 Aligned_cols=176 Identities=9% Similarity=0.020 Sum_probs=101.6
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe-CCCCCcceEEEecCCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~-~~~~~p~glAVD~~~~ 187 (395)
.|++.++.. ............+.+++|+++++.|.... .+.+.++...... ....... ..-.....+++.+.+.
T Consensus 158 ~i~iwd~~~-~~~~~~~~~~~~V~~v~fspdg~~l~s~s--~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 158 IMRIIDPSD-LTEKFEIETRGEVKDLHFSTDGKVVAYIT--GSSLEVISTVTGS--CIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp EEEEEETTT-TEEEEEEECSSCCCEEEECTTSSEEEEEC--SSCEEEEETTTCC--EEEEECCCCTTEEEEEEEEEETTE
T ss_pred EEEEeECCC-CcEEEEeCCCCceEEEEEccCCceEEecc--ceeEEEEEeccCc--ceeeeecCCCCCCEEEEEEcCCCC
Confidence 588888876 44444445667789999999988776543 4556666655331 1111111 1223467788888666
Q ss_pred eEEEEeCCC-C--eEEEEECCCCceEE----EEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe
Q psy13629 188 KLYWTDSET-N--KLEVSSLDGKKRKV----LYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD 260 (395)
Q Consensus 188 ~LYwtd~~~-~--~I~v~~ldg~~~~~----l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~ 260 (395)
.+..+.... . .+...++....... .+........+++++|++.+|.... ....|...++... .....+..
T Consensus 233 ~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs--~D~~V~iwd~~~~-~~~~~~~~ 309 (365)
T 4h5i_A 233 VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS--NDNSIALVKLKDL-SMSKIFKQ 309 (365)
T ss_dssp EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE--TTSCEEEEETTTT-EEEEEETT
T ss_pred EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc--CCCEEEEEECCCC-cEEEEecC
Confidence 665543222 1 45555554443322 1223455678999999877776544 2456777787641 22223334
Q ss_pred cCCcCceeEEEeccccEEEEeccceeeeeeecc
Q psy13629 261 STIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 261 ~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~ 293 (395)
.+....+.+++.++++.| .+-+.+++|...++
T Consensus 310 gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~i 341 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYV-ASVSAANTIHIIKL 341 (365)
T ss_dssp SSSSCEEEEEECTTSCEE-EEEETTSEEEEEEC
T ss_pred cccCCEEEEEECCCCCEE-EEEeCCCeEEEEEc
Confidence 456678899999766544 33334455554443
No 268
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.35 E-value=0.048 Score=51.32 Aligned_cols=169 Identities=9% Similarity=-0.004 Sum_probs=94.9
Q ss_pred EEEEeeCCCCC---ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC-CCCCcceEEEec
Q psy13629 109 DIRIANLSRPL---KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-GLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~---~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~-~~~~p~glAVD~ 184 (395)
.|++.++.... ....+......+..++|++.++.|+... .++.|..++++..........+.. ....+..+++.+
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 156 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP 156 (377)
T ss_dssp SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT
T ss_pred eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC
Confidence 57777776533 2334445667789999999887776655 678888888876421001222333 455688899998
Q ss_pred CCCeEEEEeCCCCeEEEEECCCCc---------------eEEEEe--cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEe
Q psy13629 185 LTEKLYWTDSETNKLEVSSLDGKK---------------RKVLYW--EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGA 247 (395)
Q Consensus 185 ~~~~LYwtd~~~~~I~v~~ldg~~---------------~~~l~~--~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~ 247 (395)
.++.|. +-...+.|.+.++.... ...++. ........++++|...+|+... ....|...+
T Consensus 157 ~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~d~~i~iwd 233 (377)
T 3dwl_C 157 NNVLLA-AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG--HDSSVTIAY 233 (377)
T ss_dssp TSSEEE-EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE--TTTEEC-CE
T ss_pred CCCEEE-EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe--CCCcEEEEE
Confidence 555554 54556889999875211 111221 2344578999999887777654 245677777
Q ss_pred cCCCCcce--EEEEecCCcCceeEEEeccccEEEEe
Q psy13629 248 MNGDPRHR--KVIVDSTIFWPNGIAIDFNNRLLYWI 281 (395)
Q Consensus 248 ~dG~~~~~--~~lv~~~~~~P~glalD~~~~rLYwa 281 (395)
+....... ...+..+......+++.+++..|..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 234 PSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp ECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEE
T ss_pred CCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEE
Confidence 76521100 11222334456788888666555444
No 269
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.29 E-value=0.23 Score=45.64 Aligned_cols=174 Identities=11% Similarity=-0.006 Sum_probs=104.9
Q ss_pred EEEEeeC-CCCCccEEecC--CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccC---------CCCCceEEEEeCCCCC
Q psy13629 109 DIRIANL-SRPLKPVTIIK--DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDG---------NNVGSKHNVITNGLIT 176 (395)
Q Consensus 109 ~I~~~~l-~~~~~~~~~~~--~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg---------~~~~~~~~i~~~~~~~ 176 (395)
.|++.++ .. .....+.. ....+.+++|++ ++.|+.. ..++.|..+++.. ... .. .......
T Consensus 80 ~i~~wd~~~~-~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~--~~--~~~~~~~ 152 (342)
T 1yfq_A 80 EILKVDLIGS-PSFQALTNNEANLGICRICKYG-DDKLIAA-SWDGLIEVIDPRNYGDGVIAVKNLN--SN--NTKVKNK 152 (342)
T ss_dssp CEEEECSSSS-SSEEECBSCCCCSCEEEEEEET-TTEEEEE-ETTSEEEEECHHHHTTBCEEEEESC--SS--SSSSCCC
T ss_pred eEEEEEeccC-CceEeccccCCCCceEEEEeCC-CCEEEEE-cCCCeEEEEcccccccccccccCCe--ee--EEeeCCc
Confidence 6788888 66 44455555 667789999999 6665544 4788899888764 210 00 0112245
Q ss_pred cceEEEecCCCeEEEEeCCCCeEEEEECCC-Cc--eEEEEecCCCCceeEEEeC-CCCeEEEEeeCCCCeEEEEecCCC-
Q psy13629 177 PDGLAIDWLTEKLYWTDSETNKLEVSSLDG-KK--RKVLYWEDIDQPRAIALVP-QDSIMFWTDWGEVPKIERGAMNGD- 251 (395)
Q Consensus 177 p~glAVD~~~~~LYwtd~~~~~I~v~~ldg-~~--~~~l~~~~~~~P~~iavdp-~~g~LYwtd~~~~~~I~~~~~dG~- 251 (395)
+.++++++ +.++.+ ...+.|.+.++.. .. ...........+..++++| ...+++... . ...|...+++..
T Consensus 153 v~~~~~~~--~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~-dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 153 IFTMDTNS--SRLIVG-MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS-I-DGRVAVEFFDDQG 227 (342)
T ss_dssp EEEEEECS--SEEEEE-ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE-T-TSEEEEEECCTTC
T ss_pred eEEEEecC--CcEEEE-eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe-c-CCcEEEEEEcCCC
Confidence 66677664 335444 4568999999987 33 2233323456789999999 776666554 2 456666566542
Q ss_pred ----CcceEEEEecCC---------cCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 252 ----PRHRKVIVDSTI---------FWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 252 ----~~~~~~lv~~~~---------~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
...... +..+. ...+.+++++.++.|+.+. ..+.|...++...
T Consensus 228 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 228 DDYNSSKRFA-FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQTR 283 (342)
T ss_dssp CSTTCTTCEE-EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-TTSCEEEEETTTT
T ss_pred ccccccccee-eecccccccccccceeEEEEEEcCCCCEEEEec-CCceEEEEcCccH
Confidence 022222 22222 2677888887766666554 3456666666533
No 270
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.25 E-value=0.24 Score=45.38 Aligned_cols=156 Identities=12% Similarity=0.077 Sum_probs=92.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|..++.++ ...............+..|.. +.||++. +.|++++.+|. ...........+.++++|. .++
T Consensus 158 ~l~~~d~~g-~~~~~~~~~~~~~~~~~~d~~-g~l~v~t---~~l~~~d~~g~----~~~~~~~~~~~~~~~~~~~-~g~ 227 (330)
T 3hxj_A 158 YLYAINPDG-TEKWRFKTNDAITSAASIGKD-GTIYFGS---DKVYAINPDGT----EKWNFYAGYWTVTRPAISE-DGT 227 (330)
T ss_dssp EEEEECTTS-CEEEEEECSSCCCSCCEECTT-CCEEEES---SSEEEECTTSC----EEEEECCSSCCCSCCEECT-TSC
T ss_pred EEEEECCCC-CEeEEEecCCCceeeeEEcCC-CEEEEEe---CEEEEECCCCc----EEEEEccCCcceeceEECC-CCe
Confidence 566666653 322222222334555666654 4577665 78888885553 2222223335678899986 568
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
||+... .+.|.+++.+|......- .....+..+++++ ++.||++.. ...|.+.+.+| ... ......-.....
T Consensus 228 l~v~t~-~~gl~~~~~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~v~t~--~ggl~~~d~~g--~~~-~~~~~~~~~~~~ 299 (330)
T 3hxj_A 228 IYVTSL-DGHLYAINPDGTEKWRFK-TGKRIESSPVIGN-TDTIYFGSY--DGHLYAINPDG--TEK-WNFETGSWIIAT 299 (330)
T ss_dssp EEEEET-TTEEEEECTTSCEEEEEE-CSSCCCSCCEECT-TSCEEEECT--TCEEEEECTTS--CEE-EEEECSSCCCSC
T ss_pred EEEEcC-CCeEEEECCCCCEeEEee-CCCCccccceEcC-CCeEEEecC--CCCEEEECCCC--cEE-EEEEcCCccccc
Confidence 888764 467888888776654443 3334456677774 678988762 34788888776 222 222222234556
Q ss_pred EEEeccccEEEEecc
Q psy13629 269 IAIDFNNRLLYWIDG 283 (395)
Q Consensus 269 lalD~~~~rLYwaD~ 283 (395)
+.+| .+++||++..
T Consensus 300 ~~~d-~~g~l~~gt~ 313 (330)
T 3hxj_A 300 PVID-ENGTIYFGTR 313 (330)
T ss_dssp CEEC-TTCCEEEECT
T ss_pred eEEc-CCCEEEEEcC
Confidence 6776 4567887763
No 271
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.24 E-value=0.76 Score=42.76 Aligned_cols=173 Identities=8% Similarity=-0.031 Sum_probs=105.0
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEe---CCCCCcceEEEecC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT---NGLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~---~~~~~p~glAVD~~ 185 (395)
.|++.++........+......+.+++|++.++.|+-.. .++.|...++.+. ...... ........++..+.
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~-~d~~i~~wd~~~~----~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG-AEREIKLWNILGE----CKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE-TTSCEEEEESSSC----EEEECCTTTSCSSCEEEEEECCC
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc-CCCEEEEEeccCC----ceeeeecccCCCceeeeeeeccc
Confidence 688888876344445555677889999999988776554 7889999998753 111111 11233556666654
Q ss_pred C---------CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceE
Q psy13629 186 T---------EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRK 256 (395)
Q Consensus 186 ~---------~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~ 256 (395)
. +.++.+-...+.|.+.+.++.....+. ........++++|...+|.-.. ....|...++........
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs--~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFK-AHESNVNHLSISPNGKYIATGG--KDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEE--TTCEEEEEESSCCSSCSE
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEc-CccccceEEEECCCCCEEEEEc--CCCeEEEEECCCCcccce
Confidence 4 145566667889999996655444433 4456788999999777665443 356677777733112222
Q ss_pred EEEecCCcCceeEEEeccccEEEEeccceeeeeeecc
Q psy13629 257 VIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 257 ~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~ 293 (395)
.+-.. ...+.+++++.+..|..+ ..+.|...++
T Consensus 251 ~~~~~--~~v~~v~~sp~~~~la~~--~d~~v~iw~~ 283 (343)
T 2xzm_R 251 EFDAG--STINQIAFNPKLQWVAVG--TDQGVKIFNL 283 (343)
T ss_dssp EEECS--SCEEEEEECSSSCEEEEE--ESSCEEEEES
T ss_pred eecCC--CcEEEEEECCCCCEEEEE--CCCCEEEEEe
Confidence 22121 246778888766544333 2334444443
No 272
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.22 E-value=0.4 Score=50.27 Aligned_cols=184 Identities=13% Similarity=0.151 Sum_probs=107.8
Q ss_pred EEEEeeCCCCCc-cEEecCCCC---CeEEEEEEcCCCEEEEEECC----CCeEEEEEccCCCCCceEEEEeCCCCCcceE
Q psy13629 109 DIRIANLSRPLK-PVTIIKDLE---EGAAIDYYYKKSMVCWTDHG----TEMISCCTFDGNNVGSKHNVITNGLITPDGL 180 (395)
Q Consensus 109 ~I~~~~l~~~~~-~~~~~~~~~---~~~gl~~d~~~~~lywsd~~----~~~I~~~~~dg~~~~~~~~i~~~~~~~p~gl 180 (395)
.|.+.++.+... ...+..... ...+++++++++.|+++... ...|+..++++........+. .........
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~ 322 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI-PDLKAQWDF 322 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE-CSSSSCEEE
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec-CCCCceEEE
Confidence 466677654221 233333322 36789999999988877532 458999988764100023333 222222222
Q ss_pred EEecCCCeEEEEeC---CCCeEEEEECCCC--ceEEEEecCCCCceeEEEeCCCCeEEEEeeC-CCCeEEEEecCCCCcc
Q psy13629 181 AIDWLTEKLYWTDS---ETNKLEVSSLDGK--KRKVLYWEDIDQPRAIALVPQDSIMFWTDWG-EVPKIERGAMNGDPRH 254 (395)
Q Consensus 181 AVD~~~~~LYwtd~---~~~~I~v~~ldg~--~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~-~~~~I~~~~~dG~~~~ 254 (395)
+++.++.||+... .+.+|.+.++++. ..+.++...-....+++++ ++.|+++... ...+|+..+++| ..
T Consensus 323 -~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g--~~ 397 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDG--KP 397 (741)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTS--CE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCC--Cc
Confidence 3466888888753 2568999999873 4556664333334556665 6777777533 456788888887 43
Q ss_pred eEEEEecCCcCceeEEEeccccEEEEec---cceeeeeeecccccee
Q psy13629 255 RKVIVDSTIFWPNGIAIDFNNRLLYWID---GRLTFIEVMDYDGYVR 298 (395)
Q Consensus 255 ~~~lv~~~~~~P~glalD~~~~rLYwaD---~~~~~I~~~~~dG~~~ 298 (395)
.+.+...+.....+++.+.+++.|+++- .....|+..++++...
T Consensus 398 ~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 398 AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3333222233456677776666666542 3446788888765443
No 273
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.15 E-value=0.033 Score=52.52 Aligned_cols=184 Identities=5% Similarity=-0.082 Sum_probs=101.6
Q ss_pred EEEEeeCCCC--CccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCC
Q psy13629 109 DIRIANLSRP--LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~--~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~ 186 (395)
.|++.++... .....+......+.+++|++.++.|+... .++.|..++++.................+..+++.+.+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 112 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS-QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE 112 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC
Confidence 4566666542 11222334456789999999877666554 67889888887642001122333344567788888765
Q ss_pred CeEEEEeCCCCeEEEEECCCCce---EEEEec-CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc---------
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKR---KVLYWE-DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR--------- 253 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~---~~l~~~-~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~--------- 253 (395)
+.|+... ..+.|.+.+++.... ...+.. .......++++|...+|..... ...|...+++....
T Consensus 113 ~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~ 189 (377)
T 3dwl_C 113 DKFAVGS-GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA--DRKAYVLSAYVRDVDAKPEASVW 189 (377)
T ss_dssp SCCEEEE-SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES--SSCEEEEEECCSSCC-CCCSCSS
T ss_pred CEEEEEe-cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC--CCEEEEEEEEecccCCCcccccc
Confidence 5565444 567899999887652 233323 4667899999997777765542 34566666531000
Q ss_pred ----ceEEEEe--cCCcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 254 ----HRKVIVD--STIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 254 ----~~~~lv~--~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
.....+. .+......+++++.++.|+.+. ..+.|...++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 190 GSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG-HDSSVTIAYPSAPE 238 (377)
T ss_dssp CSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE-TTTEEC-CEECSTT
T ss_pred ccccchhhhhhcccCCceEEEEEECCCCCEEEEEe-CCCcEEEEECCCCC
Confidence 0011111 3444578888987777666654 34566666655443
No 274
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.13 E-value=0.91 Score=46.85 Aligned_cols=178 Identities=10% Similarity=0.017 Sum_probs=111.3
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC---CCCCcceEEEecC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN---GLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~---~~~~p~glAVD~~ 185 (395)
.|++.++........+......+.+++|++.++.|.- ...++.|...+..+. ....+... .......+++.+.
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~s~D~~i~iwd~~~~---~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVS-ASRDRTIKLWNTLGE---CKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEE-EETTSCEEEECTTSC---EEEEECSSTTSCSSCEEEEEECSC
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEE-EeCCCEEEEEECCCC---cceeeccCCCCCCCcEEEEEEeCC
Confidence 7888888763344455566778999999998877654 447888988887664 22222221 1233667888775
Q ss_pred C-CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCc
Q psy13629 186 T-EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIF 264 (395)
Q Consensus 186 ~-~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~ 264 (395)
+ +.+..+-...+.|.+.++........+.......+.++++|...+|.-.. ....|...++.. .+.+.....-.
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~--~Dg~i~iwd~~~---~~~~~~~~~~~ 603 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG--KDGVVLLWDLAE---GKKLYSLEANS 603 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSBCEEEETTT---TEEEECCBCSS
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEe--CCCeEEEEECCC---CceEEEecCCC
Confidence 4 24556666788999999988776655545556789999999776665443 245666777754 22222222233
Q ss_pred CceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 265 WPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 265 ~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
..+.+++++.+..|..+. .+.|..-++....
T Consensus 604 ~v~~~~~sp~~~~l~~~~--~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 604 VIHALCFSPNRYWLCAAT--EHGIKIWDLESKS 634 (694)
T ss_dssp CEEEEEECSSSSEEEEEE--TTEEEEEETTTTE
T ss_pred cEEEEEEcCCCcEEEEEc--CCCEEEEECCCCC
Confidence 466777876655444433 3446555555443
No 275
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.32 Score=51.16 Aligned_cols=184 Identities=10% Similarity=-0.001 Sum_probs=109.5
Q ss_pred EEEEeeCCCC-Cc-cEEecCCCCCeEEEEEEcC--CCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRP-LK-PVTIIKDLEEGAAIDYYYK--KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~-~~-~~~~~~~~~~~~gl~~d~~--~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|++.++.+. .. ...+......+.+++|.+. ++.|+ +...++.|...++++... ............+..+++.+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~-s~s~Dg~I~vwd~~~~~~-~~~~~~~~h~~~V~~v~~sp 109 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILA-SCSYDGKVLIWKEENGRW-SQIAVHAVHSASVNSVQWAP 109 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEE-EEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECC
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEE-EEeCCCeEEEEECCCCcc-cccccccCCCCCeEEEEECC
Confidence 5777776531 12 2233445667889999876 55554 555788999999887510 01222333445678899987
Q ss_pred CC-CeEEEEeCCCCeEEEEECCCCce--EEEEecCCCCceeEEEeCC-------------CCeEEEEeeCCCCeEEEEec
Q psy13629 185 LT-EKLYWTDSETNKLEVSSLDGKKR--KVLYWEDIDQPRAIALVPQ-------------DSIMFWTDWGEVPKIERGAM 248 (395)
Q Consensus 185 ~~-~~LYwtd~~~~~I~v~~ldg~~~--~~l~~~~~~~P~~iavdp~-------------~g~LYwtd~~~~~~I~~~~~ 248 (395)
.. ++++++-...+.|.+.++..... ...+.........++++|. ...|+.+. . ...|...++
T Consensus 110 ~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs-~-dg~I~iwd~ 187 (753)
T 3jro_A 110 HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-A-DNLVKIWKY 187 (753)
T ss_dssp GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEE-T-TSCEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEE-C-CCeEEEEec
Confidence 62 45555666788999999987622 2333345567889999985 44444443 2 455777766
Q ss_pred CCCCcceEE--EEecCCcCceeEEEeccc--cEEEEeccceeeeeeeccccc
Q psy13629 249 NGDPRHRKV--IVDSTIFWPNGIAIDFNN--RLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 249 dG~~~~~~~--lv~~~~~~P~glalD~~~--~rLYwaD~~~~~I~~~~~dG~ 296 (395)
......... .+..+-.....+++.+.. +++..+-...+.|..-+++..
T Consensus 188 ~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 188 NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 542111121 222344567788888773 444555445566766666543
No 276
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.05 E-value=1.5 Score=44.51 Aligned_cols=176 Identities=5% Similarity=-0.056 Sum_probs=105.3
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+..++|++.++.|. +...++.|...++..... ..............++++++.++.
T Consensus 40 ~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~la-sg~~d~~v~lWd~~~~~~-~~~~~~~~~~~~v~~v~fs~dg~~ 117 (611)
T 1nr0_A 40 SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCA-SGDVHGNVRIWDTTQTTH-ILKTTIPVFSGPVKDISWDSESKR 117 (611)
T ss_dssp EEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEESSSTTC-CEEEEEECSSSCEEEEEECTTSCE
T ss_pred EEEEecCCCcccCeEecCCCCceEEEEECCCCcEEE-EEeCCCCEEEeECCCCcc-eeeEeecccCCceEEEEECCCCCE
Confidence 677777765344555666677889999999887665 444788999999853211 112223333456789999998887
Q ss_pred EEEEeCCC---CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcC
Q psy13629 189 LYWTDSET---NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFW 265 (395)
Q Consensus 189 LYwtd~~~---~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~ 265 (395)
|..+.... +.|...+. |.....+ .......+.++++|....+..+- +....|...+... ......+..+-..
T Consensus 118 l~~~~~~~~~~~~v~~wd~-~~~~~~l-~gh~~~v~~v~f~p~~~~~l~s~-s~D~~v~lwd~~~--~~~~~~l~~H~~~ 192 (611)
T 1nr0_A 118 IAAVGEGRERFGHVFLFDT-GTSNGNL-TGQARAMNSVDFKPSRPFRIISG-SDDNTVAIFEGPP--FKFKSTFGEHTKF 192 (611)
T ss_dssp EEEEECCSSCSEEEEETTT-CCBCBCC-CCCSSCEEEEEECSSSSCEEEEE-ETTSCEEEEETTT--BEEEEEECCCSSC
T ss_pred EEEEECCCCceeEEEEeeC-CCCccee-cCCCCCceEEEECCCCCeEEEEE-eCCCeEEEEECCC--CeEeeeeccccCc
Confidence 77665432 24555442 2222222 23445678999999877655554 3345566666543 2222333445556
Q ss_pred ceeEEEeccccEEEEeccceeeeeeec
Q psy13629 266 PNGIAIDFNNRLLYWIDGRLTFIEVMD 292 (395)
Q Consensus 266 P~glalD~~~~rLYwaD~~~~~I~~~~ 292 (395)
.+.+++.++++.|.-+ ..++.|..-+
T Consensus 193 V~~v~fspdg~~las~-s~D~~i~lwd 218 (611)
T 1nr0_A 193 VHSVRYNPDGSLFAST-GGDGTIVLYN 218 (611)
T ss_dssp EEEEEECTTSSEEEEE-ETTSCEEEEE
T ss_pred eEEEEECCCCCEEEEE-ECCCcEEEEE
Confidence 7888888766544433 3345554444
No 277
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.03 E-value=1.2 Score=43.05 Aligned_cols=180 Identities=12% Similarity=-0.069 Sum_probs=109.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEec-CCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW-LTE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~-~~~ 187 (395)
.|++.++........+......+.+++|.+.+ ++++...++.|...+++.. .....+.........+++.+ .++
T Consensus 143 ~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~ 217 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKG---CCTHVFEGHNSTVRCLDIVEYKNI 217 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEEEESSSC
T ss_pred cEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCC---cEEEEECCCCCccEEEEEecCCCC
Confidence 68888887633344445567788999998765 5556668899999999865 33333444455677888875 344
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEE---------------------ecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEE
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLY---------------------WEDIDQPRAIALVPQDSIMFWTDWGEVPKIERG 246 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~---------------------~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~ 246 (395)
.+.++-...+.|.+.++......... ........-.++++...+|+... ....|...
T Consensus 218 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--~d~~i~vw 295 (464)
T 3v7d_B 218 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS--YDNTLIVW 295 (464)
T ss_dssp EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEE--TTSCEEEE
T ss_pred CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEe--CCCeEEEE
Confidence 66667667889999998765432110 01111122234455566666554 24567777
Q ss_pred ecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecccccee
Q psy13629 247 AMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 247 ~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~ 298 (395)
++.. ......+..+......+++++.+..|+.+. .++.|...+++....
T Consensus 296 d~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 296 DVAQ--MKCLYILSGHTDRIYSTIYDHERKRCISAS-MDTTIRIWDLENGEL 344 (464)
T ss_dssp ETTT--TEEEEEECCCSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTTEE
T ss_pred ECCC--CcEEEEecCCCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCcE
Confidence 7765 233233334445677888887777666554 456677777654333
No 278
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.99 E-value=1.6 Score=48.06 Aligned_cols=135 Identities=9% Similarity=0.019 Sum_probs=94.1
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC-CC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL-TE 187 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~-~~ 187 (395)
.|++.++........+......+.+++|++.++.|..+. .++.|..+++... ...............+++.+. ++
T Consensus 638 ~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~d~~v~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ 713 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCS-ADKKVKIWDSATG---KLVHTYDEHSEQVNCCHFTNKSNH 713 (1249)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTC---CEEEEEECCSSCEEEEEECSSSSC
T ss_pred eEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEECCCC---ceEEEEcCCCCcEEEEEEecCCCc
Confidence 678888876444445555677889999999888776655 7889999999865 333344444556778888764 33
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecC
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMN 249 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~d 249 (395)
.+..+-...+.|.+.+++.......+........+++++|...+|.... . ...|...++.
T Consensus 714 ~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~-dg~v~vwd~~ 773 (1249)
T 3sfz_A 714 LLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS-A-DGTLRLWDVR 773 (1249)
T ss_dssp CEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEE-S-SSEEEEEEGG
T ss_pred eEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEE-C-CCeEEEEeCC
Confidence 4555666778999999988777666645567788999999877666544 2 3445555554
No 279
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.95 E-value=1 Score=46.50 Aligned_cols=180 Identities=7% Similarity=-0.009 Sum_probs=114.3
Q ss_pred EEEEeeCCCCCc-----cEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEe
Q psy13629 109 DIRIANLSRPLK-----PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAID 183 (395)
Q Consensus 109 ~I~~~~l~~~~~-----~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD 183 (395)
.|++.++..... ...+......+..++|++.++.|. +...++.|...++... .....+........++++.
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~-sgs~Dg~v~vwd~~~~---~~~~~~~~h~~~v~~~~~s 481 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFAL-SGSWDGELRLWDLAAG---VSTRRFVGHTKDVLSVAFS 481 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEEC
T ss_pred cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEE-EEeCCCcEEEEECCCC---cceeEEeCCCCCEEEEEEe
Confidence 678887765211 123444566788999999887666 4447899999998764 2333344445668889998
Q ss_pred cCCCeEEEEeCCCCeEEEEECCCCceEEEEec---CCCCceeEEEeCCCC-eEEEEeeCCCCeEEEEecCCCCcceEEEE
Q psy13629 184 WLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE---DIDQPRAIALVPQDS-IMFWTDWGEVPKIERGAMNGDPRHRKVIV 259 (395)
Q Consensus 184 ~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~---~~~~P~~iavdp~~g-~LYwtd~~~~~~I~~~~~dG~~~~~~~lv 259 (395)
+.++.|. +-...+.|.+.+..+.....+... .......++++|... .+..+- +....|...++.. ......+
T Consensus 482 ~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~-s~d~~v~vwd~~~--~~~~~~~ 557 (694)
T 3dm0_A 482 LDNRQIV-SASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA-SWDKTVKVWNLSN--CKLRSTL 557 (694)
T ss_dssp TTSSCEE-EEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE-ETTSCEEEEETTT--CCEEEEE
T ss_pred CCCCEEE-EEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE-eCCCeEEEEECCC--CcEEEEE
Confidence 8666664 555678899999877655544322 123467889988653 233443 3345677778776 3333344
Q ss_pred ecCCcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 260 DSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 260 ~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
..+....+.++++++++.|. +-..++.|..-++....
T Consensus 558 ~~h~~~v~~v~~spdg~~l~-sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 558 AGHTGYVSTVAVSPDGSLCA-SGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp CCCSSCEEEEEECTTSSEEE-EEETTSBCEEEETTTTE
T ss_pred cCCCCCEEEEEEeCCCCEEE-EEeCCCeEEEEECCCCc
Confidence 45556678899987665544 44445667666664443
No 280
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.89 E-value=1 Score=41.24 Aligned_cols=122 Identities=7% Similarity=-0.041 Sum_probs=83.5
Q ss_pred ecCCCCCeEEEEEEcCC--CEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEE
Q psy13629 124 IIKDLEEGAAIDYYYKK--SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEV 201 (395)
Q Consensus 124 ~~~~~~~~~gl~~d~~~--~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v 201 (395)
+......+.+++|++.+ +.+.++...++.|..++++.... ............+..+++.+.++.|+ +-...+.|.+
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~i 112 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-TIPKAQQMHTGPVLDVCWSDDGSKVF-TASCDKTAKM 112 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-EEEEEEEECSSCEEEEEECTTSSEEE-EEETTSEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-eeEEEeccccCCEEEEEECcCCCEEE-EEcCCCcEEE
Confidence 34456778999999986 55666666889999999885211 22234444456788999998665665 4456789999
Q ss_pred EECCCCceEEEEecCCCCceeEEE--eCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 202 SSLDGKKRKVLYWEDIDQPRAIAL--VPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 202 ~~ldg~~~~~l~~~~~~~P~~iav--dp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
.+++......+. .......++++ ++...+|+.+. ....|...++..
T Consensus 113 wd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~--~dg~i~vwd~~~ 160 (368)
T 3mmy_A 113 WDLSSNQAIQIA-QHDAPVKTIHWIKAPNYSCVMTGS--WDKTLKFWDTRS 160 (368)
T ss_dssp EETTTTEEEEEE-ECSSCEEEEEEEECSSCEEEEEEE--TTSEEEEECSSC
T ss_pred EEcCCCCceeec-cccCceEEEEEEeCCCCCEEEEcc--CCCcEEEEECCC
Confidence 999987766654 45567889998 66554454433 356688888765
No 281
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=95.67 E-value=0.93 Score=47.36 Aligned_cols=163 Identities=6% Similarity=0.052 Sum_probs=93.0
Q ss_pred CCeEEEEEEcCCCE-EEEEECCC--CeEEEEEccCCC----CCceEEEE-eC---CCC--CcceEEEecCCCeEE-EEe-
Q psy13629 129 EEGAAIDYYYKKSM-VCWTDHGT--EMISCCTFDGNN----VGSKHNVI-TN---GLI--TPDGLAIDWLTEKLY-WTD- 193 (395)
Q Consensus 129 ~~~~gl~~d~~~~~-lywsd~~~--~~I~~~~~dg~~----~~~~~~i~-~~---~~~--~p~glAVD~~~~~LY-wtd- 193 (395)
.....++|.++++. +++.+... ..|..++.++.. ......++ .. .+. .+...+..+.++.|+ |..
T Consensus 260 ~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~ 339 (740)
T 4a5s_A 260 HYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN 339 (740)
T ss_dssp EEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEEC
T ss_pred eEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEc
Confidence 34567899998874 44555433 368888887652 00011121 11 111 144677888777776 664
Q ss_pred -CCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeC-----CCCeEEEEecCCCCcceEEEEecCC----
Q psy13629 194 -SETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWG-----EVPKIERGAMNGDPRHRKVIVDSTI---- 263 (395)
Q Consensus 194 -~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~-----~~~~I~~~~~dG~~~~~~~lv~~~~---- 263 (395)
.+...|++++++|...+.+... ......+. .++++.||++... ....|++++++| ...+..++..+
T Consensus 340 ~~G~~~l~~~~~~~~~~~~lT~g-~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g--~~~~~~lt~~~~~~~ 415 (740)
T 4a5s_A 340 EEGYRHICYFQIDKKDCTFITKG-TWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYKIQLID--YTKVTCLSCELNPER 415 (740)
T ss_dssp TTSCEEEEEEETTCSSCEESCCS-SSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEEEETTE--EEEEEESSTTTSTTT
T ss_pred CCCceEEEEEECCCCceEecccC-CEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEEEECCC--CCcceeeccccCCCC
Confidence 3356899999999887766633 22333332 2338889988743 235899999998 44443444221
Q ss_pred cCceeEEEeccccEEEEeccc--eeeeeeecccc
Q psy13629 264 FWPNGIAIDFNNRLLYWIDGR--LTFIEVMDYDG 295 (395)
Q Consensus 264 ~~P~glalD~~~~rLYwaD~~--~~~I~~~~~dG 295 (395)
..-+...++.+++.+...-.. ...+...+.++
T Consensus 416 ~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~ 449 (740)
T 4a5s_A 416 CQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVN 449 (740)
T ss_dssp BCBEEEEECTTSSEEEEEECSBSSCEEEEEETTT
T ss_pred CceEEEEECCCCCEEEEEeCCCCCCEEEEEECCC
Confidence 234567777666654444322 23455555543
No 282
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.66 E-value=0.88 Score=42.44 Aligned_cols=159 Identities=8% Similarity=-0.012 Sum_probs=94.0
Q ss_pred CeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE-eCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCc
Q psy13629 130 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 208 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~-~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~ 208 (395)
....++|++.++.|. +...++.|...++++.... ..... .........+++.+.++.|. +-...+.|.+.+++...
T Consensus 18 ~v~~l~~sp~g~~la-s~~~D~~i~iw~~~~~~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~-s~s~D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLA-SCGGDRRIRIWGTEGDSWI-CKSVLSEGHQRTVRKVAWSPCGNYLA-SASFDATTCIWKKNQDD 94 (345)
T ss_dssp CEEEEEECTTSSCEE-EEETTSCEEEEEEETTEEE-EEEEECSSCSSCEEEEEECTTSSEEE-EEETTSCEEEEEECCC-
T ss_pred cEEEEEECCCCCEEE-EEcCCCeEEEEEcCCCcce-eeeeeccccCCcEEEEEECCCCCEEE-EEECCCcEEEEEccCCC
Confidence 578999999877665 4457888999988865210 11122 22345678899998655554 55567788888877654
Q ss_pred eE--EEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcce-EEEEecCCcCceeEEEeccccEEEEeccce
Q psy13629 209 RK--VLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHR-KVIVDSTIFWPNGIAIDFNNRLLYWIDGRL 285 (395)
Q Consensus 209 ~~--~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~-~~lv~~~~~~P~glalD~~~~rLYwaD~~~ 285 (395)
.. ..+........+++++|...+|.-.. ....|...+++...... ...+..+......+++.+.+..|..+. .+
T Consensus 95 ~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d 171 (345)
T 3fm0_A 95 FECVTTLEGHENEVKSVAWAPSGNLLATCS--RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS-YD 171 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE-TT
T ss_pred eEEEEEccCCCCCceEEEEeCCCCEEEEEE--CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe-CC
Confidence 32 22323455689999999777666544 23456666665411111 122333444567778876666554443 33
Q ss_pred eeeeeeccc
Q psy13629 286 TFIEVMDYD 294 (395)
Q Consensus 286 ~~I~~~~~d 294 (395)
+.|...+..
T Consensus 172 ~~i~~w~~~ 180 (345)
T 3fm0_A 172 DTVKLYREE 180 (345)
T ss_dssp SCEEEEEEE
T ss_pred CcEEEEEec
Confidence 445444443
No 283
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.65 E-value=0.86 Score=41.13 Aligned_cols=182 Identities=7% Similarity=-0.076 Sum_probs=100.7
Q ss_pred EEEEeeCCCCCc----cEEecCCCCCeEEEEEEcC--CCEEEEEECCCCeEEEEEccCCCCC------ceEEEEeCCCCC
Q psy13629 109 DIRIANLSRPLK----PVTIIKDLEEGAAIDYYYK--KSMVCWTDHGTEMISCCTFDGNNVG------SKHNVITNGLIT 176 (395)
Q Consensus 109 ~I~~~~l~~~~~----~~~~~~~~~~~~gl~~d~~--~~~lywsd~~~~~I~~~~~dg~~~~------~~~~i~~~~~~~ 176 (395)
.|++.++..... ...+......+.+++|.+. ++.| .+...++.|..++++..... ............
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l-~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (351)
T 3f3f_A 34 HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRII-ASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGS 112 (351)
T ss_dssp EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEE-EEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSC
T ss_pred eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEE-EEEcCCCeEEEEecCCCcccccccCcceeeeecccCCc
Confidence 677888765221 1223346677899999984 4544 45557889999998764210 112222334456
Q ss_pred cceEEEecCC-CeEEEEeCCCCeEEEEECCCCceEEE------Ee-------cCCCCceeEEEeCC---CCeEEEEeeCC
Q psy13629 177 PDGLAIDWLT-EKLYWTDSETNKLEVSSLDGKKRKVL------YW-------EDIDQPRAIALVPQ---DSIMFWTDWGE 239 (395)
Q Consensus 177 p~glAVD~~~-~~LYwtd~~~~~I~v~~ldg~~~~~l------~~-------~~~~~P~~iavdp~---~g~LYwtd~~~ 239 (395)
+.++++.+.. +.+.++-...+.|.+.++........ .. ........++++|. ...|..+. .
T Consensus 113 v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~-~- 190 (351)
T 3f3f_A 113 LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA-L- 190 (351)
T ss_dssp EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE-T-
T ss_pred eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec-C-
Confidence 7889988762 44444555678999999865432110 00 23455678888886 55555544 2
Q ss_pred CCeEEEEecCCCCcce--EEEEecCCcCceeEEEecccc---EEEEeccceeeeeeecccc
Q psy13629 240 VPKIERGAMNGDPRHR--KVIVDSTIFWPNGIAIDFNNR---LLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 240 ~~~I~~~~~dG~~~~~--~~lv~~~~~~P~glalD~~~~---rLYwaD~~~~~I~~~~~dG 295 (395)
...+....... ... ...+..+-...+.+++.+.+. +++.+-..++.|..-+++.
T Consensus 191 ~~~~~~~~~~~--~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 191 EQAIIYQRGKD--GKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp TEEEEEEECTT--SCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred CCcEEEEccCC--CceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 22332222222 121 112222344567888886652 4555544556666666554
No 284
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.61 E-value=1.2 Score=40.06 Aligned_cols=123 Identities=6% Similarity=-0.054 Sum_probs=80.1
Q ss_pred cCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCC-ceEEEEeCCCCCcceEEEecC-CCeEEEEeCCCCeEEEE
Q psy13629 125 IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG-SKHNVITNGLITPDGLAIDWL-TEKLYWTDSETNKLEVS 202 (395)
Q Consensus 125 ~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~-~~~~i~~~~~~~p~glAVD~~-~~~LYwtd~~~~~I~v~ 202 (395)
......+..++|++.++.|.... .++.|..++++..... .....+......+..+++.+. ++.+.++-...+.|.+.
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCS-SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEE-TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred cccccceeEEEEcCCCCEEEEee-CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 34456789999999887766554 7889999998854211 112222334456778888764 25555666667899999
Q ss_pred ECCCCc---------eEEEEecCCCCceeEEEeCC--CCeEEEEeeCCCCeEEEEecCC
Q psy13629 203 SLDGKK---------RKVLYWEDIDQPRAIALVPQ--DSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 203 ~ldg~~---------~~~l~~~~~~~P~~iavdp~--~g~LYwtd~~~~~~I~~~~~dG 250 (395)
+++... ....+........+++++|. ..+|+.+. ....|...++..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~ 143 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG--NDGILRLYDALE 143 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTCEEEEEECSS
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec--CCCcEEEecCCC
Confidence 988752 22333344567899999998 65665544 245677777654
No 285
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.56 E-value=1.7 Score=41.35 Aligned_cols=158 Identities=10% Similarity=0.078 Sum_probs=95.5
Q ss_pred CCeEEEEEEcCC--CEEEEEECCCCeEEEEEccCCCCC-------------------------------------ceEEE
Q psy13629 129 EEGAAIDYYYKK--SMVCWTDHGTEMISCCTFDGNNVG-------------------------------------SKHNV 169 (395)
Q Consensus 129 ~~~~gl~~d~~~--~~lywsd~~~~~I~~~~~dg~~~~-------------------------------------~~~~i 169 (395)
..+.+++|.+.+ ..|..+ ..++.|..++++..... .....
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~-s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLS-TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF 172 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEE-ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE
T ss_pred CceEEEEEcCCCCcceEEEe-CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe
Confidence 668899999987 455544 57888888777642100 00011
Q ss_pred EeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCC-CceEEEE-------ecCCCCceeEEEeCCC-CeEEEEeeCCC
Q psy13629 170 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG-KKRKVLY-------WEDIDQPRAIALVPQD-SIMFWTDWGEV 240 (395)
Q Consensus 170 ~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg-~~~~~l~-------~~~~~~P~~iavdp~~-g~LYwtd~~~~ 240 (395)
.......+..+++.+.+..| .+- ..+.|.+.++.. .....++ .........++++|.. ..|+... ..
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l-~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~d 248 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETY-LSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS--SK 248 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEE-EEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE--TT
T ss_pred ccCCCcceEEEEEcCCCCEE-EEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe--CC
Confidence 12334567889999855544 454 689999999983 3332222 1234568899999987 4555443 24
Q ss_pred CeEEEEecCCCCcce----EEEEecCCc------------CceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 241 PKIERGAMNGDPRHR----KVIVDSTIF------------WPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 241 ~~I~~~~~dG~~~~~----~~lv~~~~~------------~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
..|...++... .. ...+..+.. ....+++++.+..|..+.. +.|...++..
T Consensus 249 g~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~ 315 (447)
T 3dw8_B 249 GTIRLCDMRAS--ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNM 315 (447)
T ss_dssp SCEEEEETTTC--SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTC
T ss_pred CeEEEEECcCC--ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCC
Confidence 56777777652 21 122333222 5778899887777766654 6777766653
No 286
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=95.52 E-value=0.061 Score=55.92 Aligned_cols=121 Identities=11% Similarity=0.103 Sum_probs=80.6
Q ss_pred EEEEeeCCCCCccEEecCCCC----CeEEEEEEcCCCEEEEEECC--------CCeEEEEEccCCCCCceEEEEeCCCCC
Q psy13629 109 DIRIANLSRPLKPVTIIKDLE----EGAAIDYYYKKSMVCWTDHG--------TEMISCCTFDGNNVGSKHNVITNGLIT 176 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~----~~~gl~~d~~~~~lywsd~~--------~~~I~~~~~dg~~~~~~~~i~~~~~~~ 176 (395)
+|+++++.+ .....+..... ....++|+++++.|.++... .+.|+..++++........+ ...
T Consensus 37 ~i~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l----~~~ 111 (719)
T 1z68_A 37 NIVLYNIET-GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL----PRP 111 (719)
T ss_dssp CEEEEESSS-CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC----CSS
T ss_pred CEEEEEcCC-CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec----Ccc
Confidence 678888877 34334433221 36789999999988876531 46899999987521000111 135
Q ss_pred cceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCC------------------CCceeEEEeCCCCeEEEEe
Q psy13629 177 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDI------------------DQPRAIALVPQDSIMFWTD 236 (395)
Q Consensus 177 p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~------------------~~P~~iavdp~~g~LYwtd 236 (395)
...+++.+.++.|.++. .+.|.+.++++.....+..... ....+++.+|++++|+++.
T Consensus 112 ~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 112 IQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp BCCEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred cccceECCCCCEEEEEE--CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 67899999898888875 4689999998776655432221 2235899999998887764
No 287
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.51 E-value=0.38 Score=50.63 Aligned_cols=166 Identities=8% Similarity=0.035 Sum_probs=100.8
Q ss_pred CCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCC-CeEEEEeCCCCeEEEEEC
Q psy13629 126 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT-EKLYWTDSETNKLEVSSL 204 (395)
Q Consensus 126 ~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~-~~LYwtd~~~~~I~v~~l 204 (395)
...+.+.+++|++.++.|+.+. .++.|..+++++... ..............++++.+.. +++..+-...+.|.+.++
T Consensus 7 gH~~~V~~l~~s~dg~~latg~-~dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCS-SDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEE-TTTEEEEEEEETTEE-EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEE-CCCcEEEEecCCCCC-ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 3456788999999887666554 788999998875311 1122223334556778876642 455556667889999999
Q ss_pred CCCce--EEEEecCCCCceeEEEeCC--CCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEecc------
Q psy13629 205 DGKKR--KVLYWEDIDQPRAIALVPQ--DSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFN------ 274 (395)
Q Consensus 205 dg~~~--~~l~~~~~~~P~~iavdp~--~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~------ 274 (395)
++... .............++++|. ...++.+. ....|...++.............+......+++++.
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs--~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe--CCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 88653 2233234567889999998 55555544 356777777765212233334444455677777763
Q ss_pred ------ccEEEEeccceeeeeeecccc
Q psy13629 275 ------NRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 275 ------~~rLYwaD~~~~~I~~~~~dG 295 (395)
++.+..+-..++.|...++..
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~ 189 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNS 189 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEET
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccC
Confidence 233444444456666655543
No 288
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.48 E-value=1.5 Score=40.15 Aligned_cols=93 Identities=10% Similarity=-0.066 Sum_probs=61.4
Q ss_pred EEEEeeCCC-CCcc-EEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEE--ec
Q psy13629 109 DIRIANLSR-PLKP-VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAI--DW 184 (395)
Q Consensus 109 ~I~~~~l~~-~~~~-~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAV--D~ 184 (395)
.|++.++.. .... ..+......+.+++|++.++.|+... .++.|..++++.. .... .........++++ ++
T Consensus 65 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~---~~~~-~~~~~~~v~~~~~~~~~ 139 (368)
T 3mmy_A 65 DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS-CDKTAKMWDLSSN---QAIQ-IAQHDAPVKTIHWIKAP 139 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTT---EEEE-EEECSSCEEEEEEEECS
T ss_pred cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc-CCCcEEEEEcCCC---Ccee-eccccCceEEEEEEeCC
Confidence 678888775 2333 34455677899999999888777554 7889999999875 2222 2333456677777 54
Q ss_pred CCCeEEEEeCCCCeEEEEECCCC
Q psy13629 185 LTEKLYWTDSETNKLEVSSLDGK 207 (395)
Q Consensus 185 ~~~~LYwtd~~~~~I~v~~ldg~ 207 (395)
.++++++-...+.|.+.++...
T Consensus 140 -~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 140 -NYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp -SCEEEEEEETTSEEEEECSSCS
T ss_pred -CCCEEEEccCCCcEEEEECCCC
Confidence 4454555555677888777543
No 289
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.41 E-value=0.65 Score=44.38 Aligned_cols=166 Identities=5% Similarity=0.028 Sum_probs=96.0
Q ss_pred CCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCC------Cc--eEEEEeCCC------------CCcceEEEecC
Q psy13629 126 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV------GS--KHNVITNGL------------ITPDGLAIDWL 185 (395)
Q Consensus 126 ~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~------~~--~~~i~~~~~------------~~p~glAVD~~ 185 (395)
+....+.+++|++.++.|.... .++.|..++++.... .. ....+.... ..+..++..+.
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGD-KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEE-TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCCCEEEEEc-CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 3456789999999888776554 788999998875420 00 122222322 55788888876
Q ss_pred CC-eEEEEeCCCCeEEEEECCCCceE----------------------------------------EEEecCCCCceeEE
Q psy13629 186 TE-KLYWTDSETNKLEVSSLDGKKRK----------------------------------------VLYWEDIDQPRAIA 224 (395)
Q Consensus 186 ~~-~LYwtd~~~~~I~v~~ldg~~~~----------------------------------------~l~~~~~~~P~~ia 224 (395)
++ ..+.+-...+.|.+.+++..... .+..........++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 52 34455566788888887653221 11122345678999
Q ss_pred EeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEE------EecCCcCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 225 LVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVI------VDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 225 vdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~l------v~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
++|...+|.-+ . ...|...+++.......++ ...+-.....+++++.+.+++.+-...+.|...++..
T Consensus 185 ~~~~~~~l~s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 258 (447)
T 3dw8_B 185 INSDYETYLSA--D-DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA 258 (447)
T ss_dssp ECTTSSEEEEE--C-SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred EcCCCCEEEEe--C-CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC
Confidence 99976655543 2 6778888887300111111 1233445777888876623344433445565555443
No 290
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.39 E-value=0.58 Score=44.40 Aligned_cols=184 Identities=9% Similarity=-0.074 Sum_probs=111.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCC----CceEEEEeCCCCCcceEEEec
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV----GSKHNVITNGLITPDGLAIDW 184 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~----~~~~~i~~~~~~~p~glAVD~ 184 (395)
.|++.++........+......+..++|++.++.|. +...++.|..+++..... ......+.........++..+
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la-s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~ 167 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA-CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVP 167 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE-ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCS
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE-EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEec
Confidence 688888766344444455566788899999887765 444677888888753210 000111122223345555555
Q ss_pred CCCeEEEEeCCCCeEEEEECCCCceEEEEec-----CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEE
Q psy13629 185 LTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-----DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIV 259 (395)
Q Consensus 185 ~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~-----~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv 259 (395)
..+....+-...+.|.+.++....+...+.. .......+++++.++.++.+- +....|...++........ .+
T Consensus 168 ~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg-s~D~~v~~wd~~~~~~~~~-~~ 245 (380)
T 3iz6_a 168 DQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISG-SCDTTVRLWDLRITSRAVR-TY 245 (380)
T ss_dssp SSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEE-ETTSCEEEEETTTTCCCCE-EE
T ss_pred CCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEE-ECCCeEEEEECCCCCcceE-EE
Confidence 5555556777788999999987766555521 234567888888777777775 3356677777753112222 33
Q ss_pred ecCCcCceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 260 DSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 260 ~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
..+-...+.+++.+++..| .+-..++.|..-++...
T Consensus 246 ~~h~~~v~~v~~~p~~~~l-~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 246 HGHEGDINSVKFFPDGQRF-GTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp CCCSSCCCEEEECTTSSEE-EEECSSSCEEEEETTTT
T ss_pred CCcCCCeEEEEEecCCCeE-EEEcCCCeEEEEECCCC
Confidence 3445567889998766554 44445566766666543
No 291
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.33 E-value=2.1 Score=41.05 Aligned_cols=173 Identities=6% Similarity=-0.005 Sum_probs=95.8
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.++++ .++.++.. ..++.|..+++... ............+..++.+ ++
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~--~~- 330 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSG-SLDTSIRVWDVETG---NCIHTLTGHQSLTSGMELK--DN- 330 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEE-ETTSCEEEEETTTC---CEEEEECCCCSCEEEEEEE--TT-
T ss_pred EEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEE-eCCCeEEEEECCCC---CEEEEEcCCcccEEEEEEe--CC-
Confidence 5667776552223333344566778888 34555544 47888999998764 2222333333445556654 34
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEec---CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe----c
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWE---DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD----S 261 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~---~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~----~ 261 (395)
+.++-...+.|.+.++........+.. .......++++ .++|+.+. ....|...++... .....+.. .
T Consensus 331 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~--~dg~v~iwd~~~~-~~~~~~~~~~~~~ 405 (445)
T 2ovr_B 331 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSS--DDGTVKLWDLKTG-EFIRNLVTLESGG 405 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEE--TTSEEEEEETTTC-CEEEEEEECTTGG
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEe--CCCeEEEEECCCC-ceeeeeeccccCC
Confidence 445555678999999976555444432 23446677776 34555443 3567888887642 22233321 2
Q ss_pred CCcCceeEEEeccccEEEEeccce---eeeeeecccc
Q psy13629 262 TIFWPNGIAIDFNNRLLYWIDGRL---TFIEVMDYDG 295 (395)
Q Consensus 262 ~~~~P~glalD~~~~rLYwaD~~~---~~I~~~~~dG 295 (395)
.......+++++.+..|..+.... .+|...+++.
T Consensus 406 ~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 406 SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp GTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 234567778875554444443221 1355555554
No 292
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.32 E-value=0.21 Score=49.02 Aligned_cols=121 Identities=2% Similarity=-0.157 Sum_probs=83.1
Q ss_pred CCCeEEEEEEcCCCEEEE---EECCCCeEEEEEccCC-----CC-CceEEEE--eCCCCCcceEEEecCCCeEEEEeCCC
Q psy13629 128 LEEGAAIDYYYKKSMVCW---TDHGTEMISCCTFDGN-----NV-GSKHNVI--TNGLITPDGLAIDWLTEKLYWTDSET 196 (395)
Q Consensus 128 ~~~~~gl~~d~~~~~lyw---sd~~~~~I~~~~~dg~-----~~-~~~~~i~--~~~~~~p~glAVD~~~~~LYwtd~~~ 196 (395)
...+.+++|++.++.|+. +...++.|..++++.. .. .....+. ......+.+++..+..++++.+-...
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 346899999999999887 6656788888887532 00 0001111 11234678899988767888887788
Q ss_pred CeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 197 NKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 197 ~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
+.|.+.++...............+++++.+|...+|+... ....|...+++|
T Consensus 172 g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs--~dg~v~iwd~~~ 223 (434)
T 2oit_A 172 GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK--QNGTVVQYLPTL 223 (434)
T ss_dssp SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE--TTSCEEEECTTC
T ss_pred CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc--CCCcEEEEccCC
Confidence 9999999987644322223345789999999877777665 245688888876
No 293
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.29 E-value=1.8 Score=40.07 Aligned_cols=164 Identities=8% Similarity=-0.062 Sum_probs=95.2
Q ss_pred EEEEeeCCCCCccEEec---CCCCCeEEEEEEcCCC---------EEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCC
Q psy13629 109 DIRIANLSRPLKPVTII---KDLEEGAAIDYYYKKS---------MVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT 176 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~---~~~~~~~gl~~d~~~~---------~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~ 176 (395)
.|++.++.+ ....... ........++|++... .++.+...++.|...+.++ ............
T Consensus 141 ~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~h~~~ 215 (343)
T 2xzm_R 141 EIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTFKAHESN 215 (343)
T ss_dssp CEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEEECCSSC
T ss_pred EEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEEcCcccc
Confidence 577777764 2222222 2344578888987752 3556666788998888554 223333344456
Q ss_pred cceEEEecCCCeEEEEeCCCCeEEEEEC-CCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcce
Q psy13629 177 PDGLAIDWLTEKLYWTDSETNKLEVSSL-DGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHR 255 (395)
Q Consensus 177 p~glAVD~~~~~LYwtd~~~~~I~v~~l-dg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~ 255 (395)
...+++.+.++.| .+-...+.|.+.++ ........+ ........++++|...+|..+. ...|...++.......
T Consensus 216 v~~~~~s~~g~~l-~sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~---d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 216 VNHLSISPNGKYI-ATGGKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGT---DQGVKIFNLMTQSKAP 290 (343)
T ss_dssp EEEEEECTTSSEE-EEEETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEE---SSCEEEEESSSCCSCS
T ss_pred ceEEEECCCCCEE-EEEcCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEEC---CCCEEEEEeCCCCCCc
Confidence 7889998855544 56667889999998 333333333 2334588999999876665443 3346666665411111
Q ss_pred EEEEe-----------cCCcCceeEEEeccccEEEEec
Q psy13629 256 KVIVD-----------STIFWPNGIAIDFNNRLLYWID 282 (395)
Q Consensus 256 ~~lv~-----------~~~~~P~glalD~~~~rLYwaD 282 (395)
...+. .+......+++++.+..|+.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 291 VCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp EEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred eEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 11111 1122346677877777666553
No 294
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.28 E-value=2.2 Score=40.94 Aligned_cols=170 Identities=6% Similarity=-0.056 Sum_probs=99.8
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.+++++ ++ ++++...++.|...+++.. .....+.........++++ .+.
T Consensus 140 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~--~~~ 211 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DN-IIISGSTDRTLKVWNAETG---ECIHTLYGHTSTVRCMHLH--EKR 211 (445)
T ss_dssp CEEEEETTTCCEEEECCCCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEEE--TTE
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEec--CC-EEEEEeCCCeEEEEECCcC---cEEEEECCCCCcEEEEEec--CCE
Confidence 67888876633344444556678888887 34 4555558899999998865 2233333334456667765 344
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
| ++-...+.|.+.++........+.........++++ +.+|+... ....|...++.. ......+..+......
T Consensus 212 l-~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~dg~i~iwd~~~--~~~~~~~~~~~~~v~~ 284 (445)
T 2ovr_B 212 V-VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGA--YDFMVKVWDPET--ETCLHTLQGHTNRVYS 284 (445)
T ss_dssp E-EEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC--SSCEEEEE--TTSCEEEEEGGG--TEEEEEECCCSSCEEE
T ss_pred E-EEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEEC--CCEEEEEc--CCCEEEEEECCC--CcEeEEecCCCCceEE
Confidence 4 455567899999998766655554555666777773 45555444 245677777764 2222222223333445
Q ss_pred EEEeccccEEEEeccceeeeeeeccccc
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
+++ .+..|+.+. .++.|...++...
T Consensus 285 ~~~--~~~~l~~~~-~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 285 LQF--DGIHVVSGS-LDTSIRVWDVETG 309 (445)
T ss_dssp EEE--CSSEEEEEE-TTSCEEEEETTTC
T ss_pred EEE--CCCEEEEEe-CCCeEEEEECCCC
Confidence 555 355555444 3456666665433
No 295
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.28 E-value=1.7 Score=39.48 Aligned_cols=184 Identities=11% Similarity=0.005 Sum_probs=105.1
Q ss_pred EEEEeeCCCC-Cc-cEEecCCCCCeEEEEEEcC-CCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC
Q psy13629 109 DIRIANLSRP-LK-PVTIIKDLEEGAAIDYYYK-KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~-~~-~~~~~~~~~~~~gl~~d~~-~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~ 185 (395)
.|++.++.+. .. ...+......+.+++|.+. .+.++.+...+++|...+++...... .............+++.+.
T Consensus 32 ~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~-~~~~~~h~~~v~~v~~~p~ 110 (297)
T 2pm7_B 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQ-IAVHAVHSASVNSVQWAPH 110 (297)
T ss_dssp CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCC-CEEECCCSSCEEEEEECCG
T ss_pred EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEE-EEEeecCCCceeEEEeCcC
Confidence 6788887642 12 3344455667889999754 24456666688999999987542111 1122223345677888765
Q ss_pred C-CeEEEEeCCCCeEEEEECCCCce--EEEEecCCCCceeEEEeCCC------------CeEEEEeeCCCCeEEEEecCC
Q psy13629 186 T-EKLYWTDSETNKLEVSSLDGKKR--KVLYWEDIDQPRAIALVPQD------------SIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 186 ~-~~LYwtd~~~~~I~v~~ldg~~~--~~l~~~~~~~P~~iavdp~~------------g~LYwtd~~~~~~I~~~~~dG 250 (395)
. +.+..+-...+.|.+.++..... ...+.......+.++++|.. +.++.+- +....|...+++.
T Consensus 111 ~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sg-s~D~~v~lwd~~~ 189 (297)
T 2pm7_B 111 EYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNS 189 (297)
T ss_dssp GGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEE-ETTSCEEEEEEET
T ss_pred CCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEE-cCCCcEEEEEEcC
Confidence 2 45555666778999999875421 22333444567788888862 3445554 3344566666654
Q ss_pred CCcc--eEEEEecCCcCceeEEEeccc--cEEEEeccceeeeeeeccc
Q psy13629 251 DPRH--RKVIVDSTIFWPNGIAIDFNN--RLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 251 ~~~~--~~~lv~~~~~~P~glalD~~~--~rLYwaD~~~~~I~~~~~d 294 (395)
.... ....+..+-...+.+++++.+ +++..+-..+++|..-+++
T Consensus 190 ~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 190 DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred CCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 1111 111223344567788888654 3455554445555555544
No 296
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.27 E-value=1.7 Score=39.50 Aligned_cols=182 Identities=8% Similarity=-0.047 Sum_probs=109.5
Q ss_pred EEEEeeCCCCC-cc----EEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEe
Q psy13629 109 DIRIANLSRPL-KP----VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAID 183 (395)
Q Consensus 109 ~I~~~~l~~~~-~~----~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD 183 (395)
.|++.++.... .. ..+......+.+++|++.++.|+... .++.|...+.... ...............+...
T Consensus 62 ~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~-~d~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 137 (340)
T 4aow_A 62 TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS-WDGTLRLWDLTTG---TTTRRFVGHTKDVLSVAFS 137 (340)
T ss_dssp CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTT---EEEEEEECCSSCEEEEEEC
T ss_pred eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc-ccccceEEeeccc---ceeeeecCCCCceeEEEEe
Confidence 57777765522 11 12233456788999999888777555 7788888888765 3333444444556666666
Q ss_pred cCCCeEEEEeCCCCeEEEEECCCCceEEEEec-CCCCceeEEEeCCCCe-EEEEeeCCCCeEEEEecCCCCcceEEEEec
Q psy13629 184 WLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-DIDQPRAIALVPQDSI-MFWTDWGEVPKIERGAMNGDPRHRKVIVDS 261 (395)
Q Consensus 184 ~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~-~~~~P~~iavdp~~g~-LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~ 261 (395)
+.++.|+ +-...+.+.+.++.+......... .......+++.+.... ++.+- +....|...++.. .........
T Consensus 138 ~~~~~l~-s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~-~~d~~i~i~d~~~--~~~~~~~~~ 213 (340)
T 4aow_A 138 SDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC-GWDKLVKVWNLAN--CKLKTNHIG 213 (340)
T ss_dssp TTSSCEE-EEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE-ETTSCEEEEETTT--TEEEEEECC
T ss_pred ecCccce-eecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE-cCCCEEEEEECCC--CceeeEecC
Confidence 6555554 444567888888877665544322 2445667788776544 33443 3456677777765 333333333
Q ss_pred CCcCceeEEEeccccEEEEeccceeeeeeeccccceee
Q psy13629 262 TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRL 299 (395)
Q Consensus 262 ~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~~~ 299 (395)
+-...+.+++++++..|+.+. .++.|..-++......
T Consensus 214 h~~~v~~~~~s~~~~~l~s~s-~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 214 HTGYLNTVTVSPDGSLCASGG-KDGQAMLWDLNEGKHL 250 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-TTCEEEEEETTTTEEE
T ss_pred CCCcEEEEEECCCCCEEEEEe-CCCeEEEEEeccCcee
Confidence 445678888987666555443 4566666666554443
No 297
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.27 E-value=3 Score=42.33 Aligned_cols=187 Identities=14% Similarity=0.060 Sum_probs=111.8
Q ss_pred ccCCCCcee------EEEEEeeCCCCCc-c-EEecCCCCCeEEEEEEcCCCEEEEEECCCC---eEEEEEccCCCCCceE
Q psy13629 99 KLQPDGAYL------LDIRIANLSRPLK-P-VTIIKDLEEGAAIDYYYKKSMVCWTDHGTE---MISCCTFDGNNVGSKH 167 (395)
Q Consensus 99 ~~~~~~~~~------~~I~~~~l~~~~~-~-~~~~~~~~~~~gl~~d~~~~~lywsd~~~~---~I~~~~~dg~~~~~~~ 167 (395)
..+|++.++ ..|++.++..... . ..+......+.+++|+++++.|..+..... .|+..+. +. . .
T Consensus 66 ~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~---~-~ 140 (611)
T 1nr0_A 66 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GT---S-N 140 (611)
T ss_dssp EECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CC---B-C
T ss_pred EECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CC---C-c
Confidence 445665554 2688888754222 2 223345567899999999998887764432 3444332 21 1 1
Q ss_pred EEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEe
Q psy13629 168 NVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGA 247 (395)
Q Consensus 168 ~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~ 247 (395)
..+.........+++.+.+..+..+-...+.|...+.........+...-...++++++|+..+|. +- +....|...+
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~la-s~-s~D~~i~lwd 218 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFA-ST-GGDGTIVLYN 218 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEE-EE-ETTSCEEEEE
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEE-EE-ECCCcEEEEE
Confidence 112233356778898886666667777788999999776555444434456789999999766554 43 2345677777
Q ss_pred cCCCCcceEEEEe------cCCcCceeEEEeccccEEEEeccceeeeeeeccc
Q psy13629 248 MNGDPRHRKVIVD------STIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 248 ~dG~~~~~~~lv~------~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
+... .....+.. .+.....+++++++++.|.-+ ..++.|..-++.
T Consensus 219 ~~~g-~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~-s~D~~v~lWd~~ 269 (611)
T 1nr0_A 219 GVDG-TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA-SADKTIKIWNVA 269 (611)
T ss_dssp TTTC-CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE-ETTSEEEEEETT
T ss_pred CCCC-cEeeeeccccccccccCCCEEEEEECCCCCEEEEE-eCCCeEEEEeCC
Confidence 5431 22222212 244567888898776666544 345566655554
No 298
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.09 E-value=1.6 Score=47.10 Aligned_cols=156 Identities=7% Similarity=-0.093 Sum_probs=99.6
Q ss_pred CCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCC
Q psy13629 128 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 207 (395)
Q Consensus 128 ~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~ 207 (395)
...+.+++|++.++.|.... .++.|..++.++. ........-.....|++.+ ++.|. +-...+.|.+-+++..
T Consensus 17 ~~~V~~lafspdg~~lAsgs-~Dg~I~lw~~~~~----~~~~~~~~~~~V~~l~fsp-g~~L~-S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIAT-VTGEVHIYGQQQV----EVVIKLEDRSAIKEMRFVK-GIYLV-VINAKDTVYVLSLYSQ 89 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEE-TTSEEEEECSTTC----EEEEECSSCCCEEEEEEET-TTEEE-EEETTCEEEEEETTTC
T ss_pred CCCcEEEEECCCCCEEEEEe-CCCEEEEEeCCCc----EEEEEcCCCCCEEEEEEcC-CCEEE-EEECcCeEEEEECCCC
Confidence 45689999999988766544 7789998887764 1222233344678899998 55454 4456789999999876
Q ss_pred ceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEE-E----------ecCCcCceeEEEecccc
Q psy13629 208 KRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVI-V----------DSTIFWPNGIAIDFNNR 276 (395)
Q Consensus 208 ~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~l-v----------~~~~~~P~glalD~~~~ 276 (395)
.....+. .-.....++++|...+|+.... ...|...++++ .....+ + ..+......+++++.++
T Consensus 90 ~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~--dg~V~lwd~~~--~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 90 KVLTTVF-VPGKITSIDTDASLDWMLIGLQ--NGSMIVYDIDR--DQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp SEEEEEE-CSSCEEEEECCTTCSEEEEEET--TSCEEEEETTT--TEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred cEEEEEc-CCCCEEEEEECCCCCEEEEEcC--CCcEEEEECCC--CccccceeccccccccccccCCCCeEEEEEccCCC
Confidence 5544332 3356889999999998887762 45678888876 222111 1 12334567788887554
Q ss_pred EEEEeccceeeeeeeccccc
Q psy13629 277 LLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 277 rLYwaD~~~~~I~~~~~dG~ 296 (395)
.+..+-...+.| .-++...
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~ 183 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVEN 183 (902)
T ss_dssp EEEEEECSSCEE-EEETTTT
T ss_pred CEEEEEeCCCcE-EEECCCC
Confidence 444443344555 5555443
No 299
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=94.99 E-value=0.073 Score=55.28 Aligned_cols=181 Identities=10% Similarity=-0.057 Sum_probs=103.2
Q ss_pred EEEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCC-------------
Q psy13629 108 LDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL------------- 174 (395)
Q Consensus 108 ~~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~------------- 174 (395)
..|++.++++ .+.............++|+++++.|.++. ++.|+..++++.. ...+...+.
T Consensus 90 ~~i~~~d~~~-g~~~~~~~l~~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~---~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 90 ATYYIYDLSN-GEFVRGNELPRPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDP---PFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp EEEEEEETTT-TEECCSSCCCSSBCCEEECSSTTCEEEEE--TTEEEEESSTTSC---CEECCCCCBTTTEEESSCCHHH
T ss_pred eEEEEEECCC-CccccceecCcccccceECCCCCEEEEEE--CCeEEEEeCCCCC---cEEEecCCCcCCeEccccccee
Confidence 4678888876 33200011224567789999999888874 5689988887652 222222221
Q ss_pred -----CCcceEEEecCCCeEEEEeCC---------------------------------CCeEEEEECCCCceE---EEE
Q psy13629 175 -----ITPDGLAIDWLTEKLYWTDSE---------------------------------TNKLEVSSLDGKKRK---VLY 213 (395)
Q Consensus 175 -----~~p~glAVD~~~~~LYwtd~~---------------------------------~~~I~v~~ldg~~~~---~l~ 213 (395)
....+++..+.++.|+++... ...|.+.++++.... .+.
T Consensus 164 ~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 243 (719)
T 1z68_A 164 EEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP 243 (719)
T ss_dssp HHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC
T ss_pred eeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc
Confidence 122588999888888776421 116778888776531 111
Q ss_pred e-----cCCCCceeEEEeCCCCeEEEE--eeC-CCCeEEEEe----cCCCCcceEEEE----ecCCcCce-----eEEEe
Q psy13629 214 W-----EDIDQPRAIALVPQDSIMFWT--DWG-EVPKIERGA----MNGDPRHRKVIV----DSTIFWPN-----GIAID 272 (395)
Q Consensus 214 ~-----~~~~~P~~iavdp~~g~LYwt--d~~-~~~~I~~~~----~dG~~~~~~~lv----~~~~~~P~-----glalD 272 (395)
. ........++.+|+ +.+.++ +.. ...+|..++ .++ ...+.+. ..+-.+.. .+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~s 320 (719)
T 1z68_A 244 VPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQT--WDCPKTQEHIEESRTGWAGGFFVSTPVFS 320 (719)
T ss_dssp CCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSS--EECCGGGEEEEECSSSCSSSSSCCCCEEC
T ss_pred CCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCC--CceEEEEecccccCCceEccccCCccEEC
Confidence 0 12223578899998 555544 211 124688888 554 2222222 22222333 56777
Q ss_pred ccccEEEEe---ccceeeeeeeccccce
Q psy13629 273 FNNRLLYWI---DGRLTFIEVMDYDGYV 297 (395)
Q Consensus 273 ~~~~rLYwa---D~~~~~I~~~~~dG~~ 297 (395)
+++++||+. ..+..+|...++++..
T Consensus 321 pdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 321 YDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp TTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 777777663 2334567777776644
No 300
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.98 E-value=2.6 Score=40.07 Aligned_cols=183 Identities=7% Similarity=-0.131 Sum_probs=103.6
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE------------------
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI------------------ 170 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~------------------ 170 (395)
.|++.|+...............+.+++|++.+..+..+...++.|...++...... ....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~--~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSA--EENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC------------CSCCCSEEEESGGG
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccc--ccccccCCcccceEEecccccc
Confidence 78888876544455566677788999999988777777778899999988754210 0000
Q ss_pred ------eCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEe------------------cCCCCceeEEEe
Q psy13629 171 ------TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYW------------------EDIDQPRAIALV 226 (395)
Q Consensus 171 ------~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~------------------~~~~~P~~iavd 226 (395)
.........++.....++...+-...++|.+.++........+. .......+....
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEEC
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEc
Confidence 01112344555554445555566667788887775433221111 112223344555
Q ss_pred CCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 227 PQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 227 p~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
|..+.+|.+--+....|...+.+.. .....+.. +-.....++++++++.|-.+. .+.+..+.+.|..
T Consensus 325 ~~~~~~~~~sgs~Dg~V~lwd~~~~-~~~~~~~~-~~~~V~svafspdG~~LA~as--~~Gv~lvrL~gf~ 391 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLIQLINTYEK-DSNSIPIQ-LGMPIVDFCWHQDGSHLAIAT--EGSVLLTRLMGFT 391 (393)
T ss_dssp SSCTTEEEEEETTTTEEEEEETTCT-TCCEEEEE-CSSCEEEEEECTTSSEEEEEE--SSEEEEEEEGGGC
T ss_pred cCCCCEEEEEECCCCEEEEEECCCC-cEEEEecC-CCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEeCcc
Confidence 5556666655345677888887652 22333332 333567899998888775553 3445555655543
No 301
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.86 E-value=1.6 Score=41.62 Aligned_cols=136 Identities=9% Similarity=-0.014 Sum_probs=83.1
Q ss_pred EEEEeeCCCCCccEEecC--CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC-
Q psy13629 109 DIRIANLSRPLKPVTIIK--DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL- 185 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~--~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~- 185 (395)
.|++.++........+.. ....+.+++|++.++.|+... .++.|..+++.... ....+..........+++.+.
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGT-TRGIIDIWDIRFNV--LIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEE-TTSCEEEEETTTTE--EEEEEBCTTCEEEEEEEECTTT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEc-CCCeEEEEEcCCcc--EEEEEecCCCCceEEEEecccc
Confidence 788888876333333333 457899999999877666554 77899999988641 112222233334566665542
Q ss_pred --CCeEEEEeCCCCeEEEEECCCCceEEEEecCC--------------------------CCceeEEEeCCCCeEEEEee
Q psy13629 186 --TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDI--------------------------DQPRAIALVPQDSIMFWTDW 237 (395)
Q Consensus 186 --~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~--------------------------~~P~~iavdp~~g~LYwtd~ 237 (395)
.+.+.++-...+.|.+.++....+...+.... .....++++ .+.+.++-
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~- 346 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTD- 346 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEE-
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEec-
Confidence 35566677778899999998655544333211 114567777 33444444
Q ss_pred CCCCeEEEEecCC
Q psy13629 238 GEVPKIERGAMNG 250 (395)
Q Consensus 238 ~~~~~I~~~~~dG 250 (395)
+....|...++..
T Consensus 347 ~~d~~i~~wd~~~ 359 (437)
T 3gre_A 347 EATSSIVMFSLNE 359 (437)
T ss_dssp GGGTEEEEEETTC
T ss_pred CCCCeEEEEECCC
Confidence 3356788888765
No 302
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.83 E-value=1.1 Score=46.35 Aligned_cols=178 Identities=8% Similarity=-0.026 Sum_probs=101.5
Q ss_pred EEEeeCCCCCc-cEEecCC---CCCeEEEEEEcCCCEEEEEECCC---CeEEEEEccCCCCCceEEEEeCCCCCcceEEE
Q psy13629 110 IRIANLSRPLK-PVTIIKD---LEEGAAIDYYYKKSMVCWTDHGT---EMISCCTFDGNNVGSKHNVITNGLITPDGLAI 182 (395)
Q Consensus 110 I~~~~l~~~~~-~~~~~~~---~~~~~gl~~d~~~~~lywsd~~~---~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAV 182 (395)
|.+.++.+... ...+... .....+++++++++.|+++.... ..|+..+.++. ....+... .......+
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~---~~~~l~~~-~~~~~~~~- 278 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK---DFRLLVKG-VGAKYEVH- 278 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS---SCEEEEEC-SSCCEEEE-
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC---ceEEeecC-CCceEEEE-
Confidence 88888866321 2333332 23567899999999888775332 36776654433 33444433 22223332
Q ss_pred ecCCCeEEEEeC---CCCeEEEEECCCCce---EEEEecC-CCCceeEEEeCCCCeEEEEeeC-CCCeEEEEecCCCCcc
Q psy13629 183 DWLTEKLYWTDS---ETNKLEVSSLDGKKR---KVLYWED-IDQPRAIALVPQDSIMFWTDWG-EVPKIERGAMNGDPRH 254 (395)
Q Consensus 183 D~~~~~LYwtd~---~~~~I~v~~ldg~~~---~~l~~~~-~~~P~~iavdp~~g~LYwtd~~-~~~~I~~~~~dG~~~~ 254 (395)
.+.++ +|+... .+.+|.+.++++... +.++... .....+++++ ++.|+++... ...+|...+++| ..
T Consensus 279 ~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g--~~ 353 (695)
T 2bkl_A 279 AWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKG--KP 353 (695)
T ss_dssp EETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTC--CE
T ss_pred ecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCC--Ce
Confidence 24455 777653 368999999987542 5666433 3345677776 6677776532 457888888887 33
Q ss_pred eEEEEecCCcCceeEEEeccccEEEEec---cceeeeeeeccccce
Q psy13629 255 RKVIVDSTIFWPNGIAIDFNNRLLYWID---GRLTFIEVMDYDGYV 297 (395)
Q Consensus 255 ~~~lv~~~~~~P~glalD~~~~rLYwaD---~~~~~I~~~~~dG~~ 297 (395)
.+.+.........+++.+.+++.|+++- .....|...++++..
T Consensus 354 ~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 354 VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 3333222222334455555566666543 234667777776544
No 303
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.78 E-value=2.9 Score=40.09 Aligned_cols=170 Identities=9% Similarity=-0.005 Sum_probs=97.6
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.++++ .++ +.++...++.|...+++.. .....+.........+++ ..+
T Consensus 154 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~l~~--~~~- 224 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTGHTGSVLCLQY--DER-VIITGSSDSTVRVWDVNTG---EMLNTLIHHCEAVLHLRF--NNG- 224 (435)
T ss_dssp CEEEEESSSCCEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEESSSC---CEEEEECCCCSCEEEEEC--CTT-
T ss_pred eEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCC-EEEEEcCCCeEEEEECCCC---cEEEEEcCCCCcEEEEEE--cCC-
Confidence 6788887663334444445667788877 344 4455558899999998865 222233333334455554 344
Q ss_pred EEEEeCCCCeEEEEECCCCceE---EEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcC
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRK---VLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFW 265 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~---~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~ 265 (395)
..++-...+.|.+.++...... ............++++ ..+|+.+. ....|...++.. ......+..+...
T Consensus 225 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~--~dg~i~vwd~~~--~~~~~~~~~~~~~ 298 (435)
T 1p22_A 225 MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSAS--GDRTIKVWNTST--CEFVRTLNGHKRG 298 (435)
T ss_dssp EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEE--TTSEEEEEETTT--CCEEEEEECCSSC
T ss_pred EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCEEEEEe--CCCeEEEEECCc--CcEEEEEcCCCCc
Confidence 4455556789999998865543 2232334456667664 55666554 356788888765 2332233334344
Q ss_pred ceeEEEeccccEEEEeccceeeeeeeccccc
Q psy13629 266 PNGIAIDFNNRLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 266 P~glalD~~~~rLYwaD~~~~~I~~~~~dG~ 296 (395)
...++.+ ++.|+ +-..++.|...++...
T Consensus 299 v~~~~~~--~~~l~-~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 299 IACLQYR--DRLVV-SGSSDNTIRLWDIECG 326 (435)
T ss_dssp EEEEEEE--TTEEE-EEETTSCEEEEETTTC
T ss_pred EEEEEeC--CCEEE-EEeCCCeEEEEECCCC
Confidence 5555554 44444 4334566777776543
No 304
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.68 E-value=3.2 Score=39.75 Aligned_cols=171 Identities=11% Similarity=0.003 Sum_probs=99.4
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++........+......+.+++++ .+ .+++...++.|...+++....................++.| ++.
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 268 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKY 268 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCSCEEEEECC--TT-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTE
T ss_pred eEEEEECCCCcEEEEEcCCCCcEEEEEEc--CC-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCE
Confidence 67888887644444445556678888886 34 44555578899999988653211113333333455566653 455
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCcee
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNG 268 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~g 268 (395)
|+ +-...+.|.+.++........+.........++.+ +++|+... ....|...++.. ......+..+......
T Consensus 269 l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~--~dg~i~iwd~~~--~~~~~~~~~h~~~v~~ 341 (435)
T 1p22_A 269 IV-SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS--SDNTIRLWDIEC--GACLRVLEGHEELVRC 341 (435)
T ss_dssp EE-EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEE--TTSCEEEEETTT--CCEEEEECCCSSCEEE
T ss_pred EE-EEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEe--CCCeEEEEECCC--CCEEEEEeCCcCcEEE
Confidence 54 54567899999998776655554455566777775 44554443 346688888764 2222233334344555
Q ss_pred EEEeccccEEEEeccceeeeeeeccc
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~d 294 (395)
+++| ++.|..+. .++.|...++.
T Consensus 342 ~~~~--~~~l~sg~-~dg~i~vwd~~ 364 (435)
T 1p22_A 342 IRFD--NKRIVSGA-YDGKIKVWDLV 364 (435)
T ss_dssp EECC--SSEEEEEE-TTSCEEEEEHH
T ss_pred EEec--CCEEEEEe-CCCcEEEEECC
Confidence 5553 55544443 34556555543
No 305
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.66 E-value=1.7 Score=40.20 Aligned_cols=118 Identities=4% Similarity=-0.111 Sum_probs=75.1
Q ss_pred CCcceEEEec-CCCeEEEEeCCCCeEEEEECCCCceEEEEec-CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCC
Q psy13629 175 ITPDGLAIDW-LTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDP 252 (395)
Q Consensus 175 ~~p~glAVD~-~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~-~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~ 252 (395)
.....+++++ ..++++.+-...+.|.+.++.......+... .......++++|...+|.... ....|...++...
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~--~dg~i~iwd~~~~- 202 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS--PDGILDVYNLSSP- 202 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC--TTSCEEEEESSCT-
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc--CCCEEEEEECCCC-
Confidence 4567788877 1344555566788999999987776544422 233578999999766555433 3567888888752
Q ss_pred cce-EEEEecCCcCceeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 253 RHR-KVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 253 ~~~-~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
... ..+-..+....+.+++.+.+..|..+.. +.|..-++....
T Consensus 203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~--~~v~iwd~~~~~ 246 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKEVKFADNGYWMVVECD--QTVVCFDLRKDV 246 (343)
T ss_dssp TSCCEECCCCTTSCEEEEEECTTSSEEEEEES--SBEEEEETTSST
T ss_pred CCCccEEeccCCCCEEEEEEeCCCCEEEEEeC--CeEEEEEcCCCC
Confidence 222 2332225567888999987777777763 367766665443
No 306
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=94.64 E-value=3.8 Score=44.04 Aligned_cols=172 Identities=9% Similarity=-0.035 Sum_probs=104.9
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.+..+ ............+.+++|++ ++.|. +-..++.|...+++... ....+ . .......+++++.++.
T Consensus 40 ~I~lw~~~~-~~~~~~~~~~~~V~~l~fsp-g~~L~-S~s~D~~v~lWd~~~~~--~~~~~-~-~~~~V~~v~~sp~g~~ 112 (902)
T 2oaj_A 40 EVHIYGQQQ-VEVVIKLEDRSAIKEMRFVK-GIYLV-VINAKDTVYVLSLYSQK--VLTTV-F-VPGKITSIDTDASLDW 112 (902)
T ss_dssp EEEEECSTT-CEEEEECSSCCCEEEEEEET-TTEEE-EEETTCEEEEEETTTCS--EEEEE-E-CSSCEEEEECCTTCSE
T ss_pred EEEEEeCCC-cEEEEEcCCCCCEEEEEEcC-CCEEE-EEECcCeEEEEECCCCc--EEEEE-c-CCCCEEEEEECCCCCE
Confidence 677777765 33334444556789999999 66454 44478999999998652 22223 2 2346788999987777
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEe-----------cCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEE
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYW-----------EDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKV 257 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~-----------~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~ 257 (395)
|+... ..+.|.+.++++........ .......+|+++|.++.+..+- .....| ..++.. .....
T Consensus 113 l~sgs-~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g-~~dg~v-lWd~~~--~~~~~ 187 (902)
T 2oaj_A 113 MLIGL-QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS-YEYVTL-TYSLVE--NEIKQ 187 (902)
T ss_dssp EEEEE-TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE-CSSCEE-EEETTT--TEEEE
T ss_pred EEEEc-CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE-eCCCcE-EEECCC--CceEE
Confidence 77655 57889999998776532211 1234678999999754444443 234567 777765 22211
Q ss_pred EEecC------------------CcCceeEEEeccccEEEEeccceeeeeeecc
Q psy13629 258 IVDST------------------IFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 258 lv~~~------------------~~~P~glalD~~~~rLYwaD~~~~~I~~~~~ 293 (395)
.+..+ ....+.+++.+++..|..+ ..++.|..-+.
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg-s~Dg~i~lWd~ 240 (902)
T 2oaj_A 188 SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI-HEDNSLVFWDA 240 (902)
T ss_dssp EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE-ETTCCEEEEET
T ss_pred EEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE-ECCCeEEEEEC
Confidence 12111 1346778887665544433 34455655554
No 307
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.56 E-value=2.6 Score=38.16 Aligned_cols=163 Identities=9% Similarity=-0.020 Sum_probs=97.3
Q ss_pred EEEEeeCCCCCccEEec-CCCCCeEEEEEEcCC-CEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCC
Q psy13629 109 DIRIANLSRPLKPVTII-KDLEEGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 186 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~-~~~~~~~gl~~d~~~-~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~ 186 (395)
.+++.++.......... ........++|.+.. +.++.+...++.|...++... ...............|++++.+
T Consensus 151 ~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---~~~~~~~~h~~~v~~~~~s~~~ 227 (340)
T 4aow_A 151 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC---KLKTNHIGHTGYLNTVTVSPDG 227 (340)
T ss_dssp CEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTS
T ss_pred eEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC---ceeeEecCCCCcEEEEEECCCC
Confidence 45666665522222222 234556777887654 345566667788998888865 2333333344567889999855
Q ss_pred CeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe------
Q psy13629 187 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD------ 260 (395)
Q Consensus 187 ~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~------ 260 (395)
+ +.++-...+.|.+.++........+ ........++++|.+..+.-+. ...|...++++ ........
T Consensus 228 ~-~l~s~s~Dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~---d~~i~iwd~~~--~~~~~~~~~~~~~~ 300 (340)
T 4aow_A 228 S-LCASGGKDGQAMLWDLNEGKHLYTL-DGGDIINALCFSPNRYWLCAAT---GPSIKIWDLEG--KIIVDELKQEVIST 300 (340)
T ss_dssp S-EEEEEETTCEEEEEETTTTEEEEEE-ECSSCEEEEEECSSSSEEEEEE---TTEEEEEETTT--TEEEEEECCC----
T ss_pred C-EEEEEeCCCeEEEEEeccCceeeee-cCCceEEeeecCCCCceeeccC---CCEEEEEECCC--CeEEEeccccceee
Confidence 4 4456566789999999887766555 3445678888888654443333 46677777776 22111111
Q ss_pred ---cCCcCceeEEEeccccEEEEe
Q psy13629 261 ---STIFWPNGIAIDFNNRLLYWI 281 (395)
Q Consensus 261 ---~~~~~P~glalD~~~~rLYwa 281 (395)
.+....+.++++++++.|+.+
T Consensus 301 ~~~~h~~~v~~l~~s~dg~~l~sg 324 (340)
T 4aow_A 301 SSKAEPPQCTSLAWSADGQTLFAG 324 (340)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEE
T ss_pred eccCCCCCEEEEEECCCCCEEEEE
Confidence 122345667777666655543
No 308
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.55 E-value=2.8 Score=38.58 Aligned_cols=181 Identities=9% Similarity=0.004 Sum_probs=96.1
Q ss_pred EEEEeeCCCCC-ccEE-e-cC-CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCC----CceEEEEeCCCCCcceE
Q psy13629 109 DIRIANLSRPL-KPVT-I-IK-DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV----GSKHNVITNGLITPDGL 180 (395)
Q Consensus 109 ~I~~~~l~~~~-~~~~-~-~~-~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~----~~~~~i~~~~~~~p~gl 180 (395)
.|++.++.... .... + .. ....+.+++|++.++.|. +...++.|...+++.... ......+........++
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la-s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v 113 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA-AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGV 113 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE-EEETTSCEEEEEC-------CCCEEEEEEC----CEEEE
T ss_pred EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE-EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEE
Confidence 56777775421 2222 2 22 455688999999877665 444778888888753210 01122233334567889
Q ss_pred EEecCCCeEEEEeCCCCeEEEEECCCC----ceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceE
Q psy13629 181 AIDWLTEKLYWTDSETNKLEVSSLDGK----KRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRK 256 (395)
Q Consensus 181 AVD~~~~~LYwtd~~~~~I~v~~ldg~----~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~ 256 (395)
++.+.++.| .+-...+.|.+.+++.. .....+.........++++|...+|.-+.+ ...|...+.........
T Consensus 114 ~~sp~g~~l-as~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~--D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 114 AWSNDGYYL-ATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY--DDTVRIWKDYDDDWECV 190 (330)
T ss_dssp EECTTSCEE-EEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET--TSCEEEEEEETTEEEEE
T ss_pred EECCCCCEE-EEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC--CCeEEEEECCCCCeeEE
Confidence 998855544 45556789999998422 122233234556889999997766654442 34455555443101122
Q ss_pred EEEecCCcCceeEEEeccc-cEEEEeccceeeeeeecc
Q psy13629 257 VIVDSTIFWPNGIAIDFNN-RLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 257 ~lv~~~~~~P~glalD~~~-~rLYwaD~~~~~I~~~~~ 293 (395)
..+..+......+++++.+ +.+..+-..++.|..-++
T Consensus 191 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 191 AVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp EEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred EEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence 2233344456677777653 223333333444544444
No 309
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=94.48 E-value=0.48 Score=48.60 Aligned_cols=111 Identities=15% Similarity=0.091 Sum_probs=75.8
Q ss_pred CCCCeEEEEEEcCCCEEEEEECC---------------------CCeEEEEEccCCCCC----ceEEEEe----------
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHG---------------------TEMISCCTFDGNNVG----SKHNVIT---------- 171 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~---------------------~~~I~~~~~dg~~~~----~~~~i~~---------- 171 (395)
.+.++.++.+++.++.||++-.+ .+.|+++..++.... ..+.++.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 46689999999999999998432 257999987643211 1122221
Q ss_pred -----------CCCCCcceEEEecCCCeEEEEe-C-----------CCCeEEEEECCCCceEE-EEecCCCCceeEEEeC
Q psy13629 172 -----------NGLITPDGLAIDWLTEKLYWTD-S-----------ETNKLEVSSLDGKKRKV-LYWEDIDQPRAIALVP 227 (395)
Q Consensus 172 -----------~~~~~p~glAVD~~~~~LYwtd-~-----------~~~~I~v~~ldg~~~~~-l~~~~~~~P~~iavdp 227 (395)
..+..|.+|++|+. ++|+++. . .++.+.+++.+...... +......+..|++++|
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp 540 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred ccccccccCCCCCccCCcceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence 13578999999985 5566654 3 24678888876444444 4334567889999999
Q ss_pred CCCeEEEEeeC
Q psy13629 228 QDSIMFWTDWG 238 (395)
Q Consensus 228 ~~g~LYwtd~~ 238 (395)
+.+.||++-..
T Consensus 541 Dg~tlfvniQH 551 (592)
T 3zwu_A 541 DQKTLFVGIQH 551 (592)
T ss_dssp TSSEEEEEEES
T ss_pred CCCEEEEEEEC
Confidence 99999987643
No 310
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.18 E-value=1.7 Score=45.64 Aligned_cols=177 Identities=12% Similarity=0.059 Sum_probs=95.2
Q ss_pred EEEEeeCCCC-CccEEecCCCCCeEEEEEEcCCCEEEEEECCC----CeEEEEEccCCCCCceEEEEeC-CCCCcceEEE
Q psy13629 109 DIRIANLSRP-LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT----EMISCCTFDGNNVGSKHNVITN-GLITPDGLAI 182 (395)
Q Consensus 109 ~I~~~~l~~~-~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~----~~I~~~~~dg~~~~~~~~i~~~-~~~~p~glAV 182 (395)
.|+++++++. .......+ ....+++|+++++.||++.... ..|++..+++... ....+... .-..-.++++
T Consensus 202 ~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~-~~~lv~~~~~~~~~~~~~~ 278 (751)
T 2xe4_A 202 TIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS-EDVCLYEEHNPLFSAFMYK 278 (751)
T ss_dssp EEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG-GCEEEEECCCTTCEEEEEE
T ss_pred EEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch-hcEEEEecCCCceEEEEEE
Confidence 5888898874 31111011 1134678999998998886432 3789999876421 11223222 1122346677
Q ss_pred ecCCCeEEEEeC--CCCeEEEEECCCCc--e--EEEEecCCCCceeEEEe-CCCCeEEEE-eeC--CCCeEEEEecCCCC
Q psy13629 183 DWLTEKLYWTDS--ETNKLEVSSLDGKK--R--KVLYWEDIDQPRAIALV-PQDSIMFWT-DWG--EVPKIERGAMNGDP 252 (395)
Q Consensus 183 D~~~~~LYwtd~--~~~~I~v~~ldg~~--~--~~l~~~~~~~P~~iavd-p~~g~LYwt-d~~--~~~~I~~~~~dG~~ 252 (395)
.+.++.|+|+.. ....|+++++++.. . +.+. .....+. ..++ ..++.|||. +.. ...+|+++++++.
T Consensus 279 SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~~~~~~~-~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~- 355 (751)
T 2xe4_A 279 AADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR-PREKGVR-YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP- 355 (751)
T ss_dssp CTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS-CCCTTCC-EEEEEETTTEEEEEECTTTCTTCEEEEEETTST-
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee-cCCCCce-EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc-
Confidence 787888888763 35679999998752 2 3333 2222221 1233 236666665 432 3578999998741
Q ss_pred cceEE-EEecCC-cCceeEEEeccccEEEEecc--ceeeeeeecc
Q psy13629 253 RHRKV-IVDSTI-FWPNGIAIDFNNRLLYWIDG--RLTFIEVMDY 293 (395)
Q Consensus 253 ~~~~~-lv~~~~-~~P~glalD~~~~rLYwaD~--~~~~I~~~~~ 293 (395)
...+. ++.... ....++.+ .++.||++-. ....|..+++
T Consensus 356 ~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 356 SDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEEC
T ss_pred ccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEec
Confidence 12222 333321 12233444 3667776632 3345666664
No 311
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.06 E-value=3.6 Score=37.86 Aligned_cols=158 Identities=8% Similarity=-0.052 Sum_probs=88.4
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEE-eC-CCCCcceEEEecCCCeEEEEeCCCCeEEEEEC
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-TN-GLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 204 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~-~~-~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~l 204 (395)
....+.+++|++. +..+...++.|...+++.... .....+ .. .......+++.+.++ +..+-...+.|.+.++
T Consensus 13 h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~-~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 13 YKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDF-TLIDVLDETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAK 87 (330)
T ss_dssp CSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCC-EEEEEECTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEEC
T ss_pred CCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCe-EEEEEEecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEEc
Confidence 4456788999865 666666888999998875321 111222 22 234578899988554 4456556788999888
Q ss_pred CCCc-------eEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcc-e-EEEEecCCcCceeEEEeccc
Q psy13629 205 DGKK-------RKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRH-R-KVIVDSTIFWPNGIAIDFNN 275 (395)
Q Consensus 205 dg~~-------~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~-~-~~lv~~~~~~P~glalD~~~ 275 (395)
.... ....+.......++++++|...+|.-+. ....|...+++..... . ...+..+....+.+++.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s--~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS--RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTSCEEEEEE--TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe--CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC
Confidence 5321 1222323345688999999776665443 2455666666321011 1 12233444567778887666
Q ss_pred cEEEEeccceeeeeeec
Q psy13629 276 RLLYWIDGRLTFIEVMD 292 (395)
Q Consensus 276 ~rLYwaD~~~~~I~~~~ 292 (395)
..|.-+ ..++.|..-+
T Consensus 166 ~~l~s~-s~D~~i~iW~ 181 (330)
T 2hes_X 166 ALLASS-SYDDTVRIWK 181 (330)
T ss_dssp SEEEEE-ETTSCEEEEE
T ss_pred CEEEEE-cCCCeEEEEE
Confidence 554443 3344454443
No 312
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=93.69 E-value=3.9 Score=36.94 Aligned_cols=171 Identities=9% Similarity=0.009 Sum_probs=96.7
Q ss_pred EEEEeeCCCCC--ccEEecCCCCCeEEEEEEcCC-CEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC
Q psy13629 109 DIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~--~~~~~~~~~~~~~gl~~d~~~-~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~ 185 (395)
.|++.++.... ...........+..++|++.. +.++.+...++.|...+++.... ...............+++.+.
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~-~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-BCCEEEECCSSCEEEEEECCC
T ss_pred EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-eeeeeeecccCccceEeecCC
Confidence 67777776521 222333455678899999862 33444555788999998875421 112233333345666777654
Q ss_pred C------------CeEEEEeCCCCeEEEEECCCCc----eEEEEecCCCCceeEEEeCCC--CeEEEEeeCCCCeEEEEe
Q psy13629 186 T------------EKLYWTDSETNKLEVSSLDGKK----RKVLYWEDIDQPRAIALVPQD--SIMFWTDWGEVPKIERGA 247 (395)
Q Consensus 186 ~------------~~LYwtd~~~~~I~v~~ldg~~----~~~l~~~~~~~P~~iavdp~~--g~LYwtd~~~~~~I~~~~ 247 (395)
. ++++.+-...+.|.+.+++... ....+...-...++++++|.. +.++.+- +....|...+
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~-s~D~~v~iWd 235 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV-SQDRTCIIWT 235 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE-ETTSCEEEEE
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE-ECCCcEEEEE
Confidence 2 3566677778889988887543 222222334568999999974 4555554 3345566666
Q ss_pred cCCCCc-ceEEEE--ecCCcCceeEEEeccccEEEEe
Q psy13629 248 MNGDPR-HRKVIV--DSTIFWPNGIAIDFNNRLLYWI 281 (395)
Q Consensus 248 ~dG~~~-~~~~lv--~~~~~~P~glalD~~~~rLYwa 281 (395)
++.... ....+. ...-.....+++++++..|..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~ 272 (297)
T 2pm7_B 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (297)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred eCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEE
Confidence 654111 122222 1222345567777666655444
No 313
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.11 E-value=3.2 Score=43.55 Aligned_cols=158 Identities=8% Similarity=0.027 Sum_probs=92.1
Q ss_pred CeEEEEEE-cCCCEEEEEECCC----CeEEEEEccCC-CCCceEEEEeCCCCCcceEEEecCCCeEEEEeCC----CCeE
Q psy13629 130 EGAAIDYY-YKKSMVCWTDHGT----EMISCCTFDGN-NVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE----TNKL 199 (395)
Q Consensus 130 ~~~gl~~d-~~~~~lywsd~~~----~~I~~~~~dg~-~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~----~~~I 199 (395)
...+..++ +++++|.|+.... ..|++.++++. .... ..+ .. ...+++..+.++.||++... ..+|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~-~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKV-SG---TNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCE-EE---ECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccc-cC---ceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 35678899 9998887775433 25999999875 3110 111 11 13466777777788887532 1479
Q ss_pred EEEECCCCce--EEEEecC-CCCceeEEEeCCCCeEEEEeeC-CCCeEEEEecCCCCcce--EEEEecCCcCceeEEEe-
Q psy13629 200 EVSSLDGKKR--KVLYWED-IDQPRAIALVPQDSIMFWTDWG-EVPKIERGAMNGDPRHR--KVIVDSTIFWPNGIAID- 272 (395)
Q Consensus 200 ~v~~ldg~~~--~~l~~~~-~~~P~~iavdp~~g~LYwtd~~-~~~~I~~~~~dG~~~~~--~~lv~~~~~~P~glalD- 272 (395)
++.++++... +.+.... ...-.++.++|++++|+|+.+. ....|+.+++++..... +.+.... ..+ -..+|
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~-~~s~~~ 327 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE-KGV-RYDVQM 327 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC-TTC-CEEEEE
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC-CCc-eEEEee
Confidence 9999987642 2333221 2234567899999999998865 46789999998631122 3333322 111 12233
Q ss_pred ccccEEEEec----cceeeeeeeccc
Q psy13629 273 FNNRLLYWID----GRLTFIEVMDYD 294 (395)
Q Consensus 273 ~~~~rLYwaD----~~~~~I~~~~~d 294 (395)
..+++|||.- +...+|..++++
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 3466666652 233466666665
No 314
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=93.04 E-value=1.1 Score=43.80 Aligned_cols=161 Identities=7% Similarity=-0.118 Sum_probs=95.3
Q ss_pred CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCC--------CCCceE----EEEeCCCCCcceEEEecCCCeEEE---Ee
Q psy13629 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGN--------NVGSKH----NVITNGLITPDGLAIDWLTEKLYW---TD 193 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~--------~~~~~~----~i~~~~~~~p~glAVD~~~~~LYw---td 193 (395)
.....|++.+.++.|+..... .|..+..+.. ...... .........+..+++++.++.|++ +.
T Consensus 37 ~~~n~lavs~~~~~l~~~~~d--gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGAS--GLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETT--EEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEecCCCEEEEECCC--EEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 346778899999988887643 2554443210 000000 011112235789999998888876 55
Q ss_pred CCCCeEEEEECCCC-----ce------EEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecC
Q psy13629 194 SETNKLEVSSLDGK-----KR------KVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDST 262 (395)
Q Consensus 194 ~~~~~I~v~~ldg~-----~~------~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~ 262 (395)
...+.|.+.++... .. ..........+++++++|..+.++.+- +....|...++.. .........+
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~-s~Dg~v~iwD~~~--~~~~~~~~~~ 191 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC-LADGSIAVLQVTE--TVKVCATLPS 191 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE-ETTSCEEEEEESS--SEEEEEEECG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE-ECCCeEEEEEcCC--CcceeeccCC
Confidence 66788999987543 11 111111245689999999866666655 3356678888775 2222112223
Q ss_pred CcCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 263 IFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 263 ~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
-..+..++++++++.|+.+. .++.|...+.++
T Consensus 192 ~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~ 223 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTL 223 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEE-TTSCEEEECTTC
T ss_pred CCceeEEEEcCCCCEEEEEc-CCCcEEEEccCC
Confidence 34678888888877777665 345666666654
No 315
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.77 E-value=6.4 Score=36.87 Aligned_cols=159 Identities=8% Similarity=-0.006 Sum_probs=94.4
Q ss_pred eEEEEEEcCCCEEEEEEC-CCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCce
Q psy13629 131 GAAIDYYYKKSMVCWTDH-GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR 209 (395)
Q Consensus 131 ~~gl~~d~~~~~lywsd~-~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~ 209 (395)
...++|+++++.|..+.. .++.|...+.... .....+ ..-..+.++++.+.++.|..+. .+.+.+.+......
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~---~~~~~~-~~~~~V~~v~fspdg~~l~s~s--~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDL---TEKFEI-ETRGEVKDLHFSTDGKVVAYIT--GSSLEVISTVTGSC 209 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTT---EEEEEE-ECSSCCCEEEECTTSSEEEEEC--SSCEEEEETTTCCE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCC---cEEEEe-CCCCceEEEEEccCCceEEecc--ceeEEEEEeccCcc
Confidence 568999999998876543 4678999998864 222222 2345688999998666665443 34566666554433
Q ss_pred EE-EEe-cCCCCceeEEEeCCCCeEEEEeeCCC--CeEEEEecCCCCcceEE----EEecCCcCceeEEEeccccEEEEe
Q psy13629 210 KV-LYW-EDIDQPRAIALVPQDSIMFWTDWGEV--PKIERGAMNGDPRHRKV----IVDSTIFWPNGIAIDFNNRLLYWI 281 (395)
Q Consensus 210 ~~-l~~-~~~~~P~~iavdp~~g~LYwtd~~~~--~~I~~~~~dG~~~~~~~----lv~~~~~~P~glalD~~~~rLYwa 281 (395)
.. ... ......+.++++|.+..+..+..... ..+...+... ..... .+..+....+.+++.++++.|..+
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS--GNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET--TEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc--ceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 22 221 12334688999998777766543322 2455555543 22211 223344456788898777766555
Q ss_pred ccceeeeeeecccccee
Q psy13629 282 DGRLTFIEVMDYDGYVR 298 (395)
Q Consensus 282 D~~~~~I~~~~~dG~~~ 298 (395)
. .++.|...+......
T Consensus 288 s-~D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 288 S-NDNSIALVKLKDLSM 303 (365)
T ss_dssp E-TTSCEEEEETTTTEE
T ss_pred c-CCCEEEEEECCCCcE
Confidence 4 356677777654443
No 316
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=92.63 E-value=1.5 Score=44.92 Aligned_cols=107 Identities=10% Similarity=0.119 Sum_probs=67.7
Q ss_pred CCCCcceEEEecCCCeEEEEeCC---------------------CCeEEEEECCCCce-------EEEEe----------
Q psy13629 173 GLITPDGLAIDWLTEKLYWTDSE---------------------TNKLEVSSLDGKKR-------KVLYW---------- 214 (395)
Q Consensus 173 ~~~~p~glAVD~~~~~LYwtd~~---------------------~~~I~v~~ldg~~~-------~~l~~---------- 214 (395)
.+.+|+|+++++.++.+|++-.. .++|.++..++... ..++.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 35689999999999999999642 36799888764321 11111
Q ss_pred -----------cCCCCceeEEEeCCCCeEEEEeeCC-----------CCeEEEEecCCCCcceEEEEecCCcCceeEEEe
Q psy13629 215 -----------EDIDQPRAIALVPQDSIMFWTDWGE-----------VPKIERGAMNGDPRHRKVIVDSTIFWPNGIAID 272 (395)
Q Consensus 215 -----------~~~~~P~~iavdp~~g~LYwtd~~~-----------~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD 272 (395)
..+..|-.|++||. |.|+++.=+. +..+...+.+.. .-++.+....-....|++++
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g-~~~rf~~~P~gaE~TG~~fs 539 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATG-EIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTC-CEEEEEECCTTCEEEEEEEC
T ss_pred ccccccccCCCCCccCCcceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCC-eEEEEEeCCCCccCcCeeEC
Confidence 12678999999995 4566654231 234555555421 33344443334467788888
Q ss_pred ccccEEEEe
Q psy13629 273 FNNRLLYWI 281 (395)
Q Consensus 273 ~~~~rLYwa 281 (395)
++++.||+.
T Consensus 540 pDg~tlfvn 548 (592)
T 3zwu_A 540 PDQKTLFVG 548 (592)
T ss_dssp TTSSEEEEE
T ss_pred CCCCEEEEE
Confidence 888888875
No 317
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.22 E-value=9.8 Score=38.80 Aligned_cols=142 Identities=6% Similarity=-0.014 Sum_probs=93.1
Q ss_pred CeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCc-----eEEEE---eCCCCCcceEEEecCCCeEEEEeCCCCeEEE
Q psy13629 130 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGS-----KHNVI---TNGLITPDGLAIDWLTEKLYWTDSETNKLEV 201 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~-----~~~i~---~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v 201 (395)
...+++|+++++.|+... .+++|...++.+..+.+ ..++- .+.......+|..+.+ ..+-...+.|.+
T Consensus 131 sv~svafSPDG~~LAsgs-~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrl 206 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGN-EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFS 206 (588)
T ss_dssp CEEEEEECSSSSCEEEEE-TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEE
T ss_pred cEEEEEEcCCCCEEEEEc-CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEE
Confidence 488999999999888776 78999999998763211 12222 1122467778877643 556667899999
Q ss_pred EECCCCceE----EEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEE--eccc
Q psy13629 202 SSLDGKKRK----VLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAI--DFNN 275 (395)
Q Consensus 202 ~~ldg~~~~----~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glal--D~~~ 275 (395)
.++++.... ++....-....++++. ++.|-.+. ...|...+.++ ....++...+.....++++ ..++
T Consensus 207 Wd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~---~~tIkLWd~~~--~~~~~~~~gh~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 207 MTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC---PGYVHKIDLKN--YSISSLKTGSLENFHIIPLNHEKES 279 (588)
T ss_dssp ECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC---SSEEEEEETTT--TEEEEEECSCCSCCCEEEETTCSSC
T ss_pred EECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe---CCeEEEEECCC--CeEEEEEcCCCceEEEEEeeeCCCC
Confidence 999987742 2322233568899998 45665443 36899999887 4443444345566677777 5444
Q ss_pred cEEEEec
Q psy13629 276 RLLYWID 282 (395)
Q Consensus 276 ~rLYwaD 282 (395)
..|-.++
T Consensus 280 ~~La~a~ 286 (588)
T 2j04_A 280 TILLMSN 286 (588)
T ss_dssp EEEEECS
T ss_pred CEEEEEc
Confidence 4455554
No 318
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.20 E-value=8.1 Score=36.68 Aligned_cols=154 Identities=6% Similarity=-0.069 Sum_probs=101.0
Q ss_pred EecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCC-ceEEEEeCCCCCcceEEEecCCCeEEEEe--CCCCeE
Q psy13629 123 TIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG-SKHNVITNGLITPDGLAIDWLTEKLYWTD--SETNKL 199 (395)
Q Consensus 123 ~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~-~~~~i~~~~~~~p~glAVD~~~~~LYwtd--~~~~~I 199 (395)
.+........++.+.+.++.+... ..++.|...+....... ...............++..+...++..+- ...+.|
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~l~s~-~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I 303 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRHLASG-GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 303 (420)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEE
T ss_pred EecccccceeeeeecCCCCeeeee-eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEE
Confidence 334456677888888887766544 47788888877643211 11122223344567788888777777654 346889
Q ss_pred EEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEE
Q psy13629 200 EVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLY 279 (395)
Q Consensus 200 ~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLY 279 (395)
.+.++........+ .....+..++..+..+.|+.+.......|...++.. ......+..+......|++.+++..|.
T Consensus 304 ~iwd~~t~~~~~~~-~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~--~~~v~~l~gH~~~V~~l~~spdg~~l~ 380 (420)
T 4gga_A 304 RIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT--MAKVAELKGHTSRVLSLTMSPDGATVA 380 (420)
T ss_dssp EEEETTTTEEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred EEEeCCccccceee-ccccceeeeeecCCCCeEEEEEecCCCEEEEEECCC--CcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 99999877766555 445678899999999988877633456788888865 233333344555678888887666554
Q ss_pred E
Q psy13629 280 W 280 (395)
Q Consensus 280 w 280 (395)
-
T Consensus 381 S 381 (420)
T 4gga_A 381 S 381 (420)
T ss_dssp E
T ss_pred E
Confidence 3
No 319
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.57 E-value=9.4 Score=36.12 Aligned_cols=182 Identities=7% Similarity=-0.074 Sum_probs=101.1
Q ss_pred EEEEeeCCC---CC--ccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEcc----CCCCCceEEEEeC-------
Q psy13629 109 DIRIANLSR---PL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD----GNNVGSKHNVITN------- 172 (395)
Q Consensus 109 ~I~~~~l~~---~~--~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~d----g~~~~~~~~i~~~------- 172 (395)
.|++.++.. .. ...........+.+++|++.++.|+... .++.|..++++ +. ........
T Consensus 87 ~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~dg~i~vwd~~~~~~~~---~~~~~~~~~i~~~~~ 162 (437)
T 3gre_A 87 VIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS-KDGQIIVLKVNHYQQES---EVKFLNCECIRKINL 162 (437)
T ss_dssp EEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE-TTSEEEEEEEEEEEETT---EEEEEEEEEEEEEEG
T ss_pred eEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe-CCCEEEEEEeccccCCc---eeeccccceeEEEEc
Confidence 577776643 11 1122224567789999998777666544 77888888774 32 11111000
Q ss_pred ----CCCCcceEEEec-CCCeEEEEeCCCCeEEEEECCCCceEEEEec--CCCCceeEEEeCCCCeEEEEeeCCCCeEEE
Q psy13629 173 ----GLITPDGLAIDW-LTEKLYWTDSETNKLEVSSLDGKKRKVLYWE--DIDQPRAIALVPQDSIMFWTDWGEVPKIER 245 (395)
Q Consensus 173 ----~~~~p~glAVD~-~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~--~~~~P~~iavdp~~g~LYwtd~~~~~~I~~ 245 (395)
....+..++.-+ ..+.+.++-...+.|.+.++........+.. ......+++++|...+|+... ....|..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~--~dg~i~i 240 (437)
T 3gre_A 163 KNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGT--TRGIIDI 240 (437)
T ss_dssp GGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEE--TTSCEEE
T ss_pred cCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEc--CCCeEEE
Confidence 111222333111 2355556666788999999987666555534 356789999999877776554 2455777
Q ss_pred EecCCCCcceEEEEecCCcCceeEEEec---cccEEEEeccceeeeeeeccccce
Q psy13629 246 GAMNGDPRHRKVIVDSTIFWPNGIAIDF---NNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 246 ~~~dG~~~~~~~lv~~~~~~P~glalD~---~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
.++... .....+...+-.....+++.+ .++++.++-..++.|..-++....
T Consensus 241 wd~~~~-~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 241 WDIRFN-VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp EETTTT-EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred EEcCCc-cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 777641 112222112222344554442 234455555556777777775443
No 320
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=91.43 E-value=0.071 Score=56.60 Aligned_cols=65 Identities=35% Similarity=0.709 Sum_probs=56.1
Q ss_pred ecccccchhhHHHhhhhcccccceeeeeecceeeeeeecCCCCCCCCccCcccccccCCCCceeE
Q psy13629 44 IRPEISLDDRSFALYSATIMDIPSSVVYLYPHLISLHVIDPNSDEMPVQERCSFEKLQPDGAYLL 108 (395)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Li~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 108 (395)
.+.+++.|+|++.|..++++++..++..+||.|++.+.++.+....|....++.+...++++|+-
T Consensus 595 ~~~~~s~Der~~~~~~l~~~~~~~~l~~iyP~L~~~h~l~~~~~~~P~~v~ls~~~l~~~giyLL 659 (770)
T 3efo_B 595 SRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLL 659 (770)
T ss_dssp CSSSSCHHHHHHHHHHHHHCCHHHHHHHHSCEEEECTTCCSSSCSCCCCCCSSGGGCCTTCEEEE
T ss_pred CCCCCCccHHHHHHHHHHCCCHHHHHHhhccceEEEeccccccccCCCCcCCcHHHcCCCcEEEE
Confidence 45789999999999999999999999999999999988776655667777788888888888873
No 321
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=91.21 E-value=0.076 Score=56.34 Aligned_cols=65 Identities=31% Similarity=0.459 Sum_probs=54.3
Q ss_pred eecccccchhhHHHhhhhcccccceeeeeecceeeeeeecCCCCCCCCccCcccccccCCCCcee
Q psy13629 43 LIRPEISLDDRSFALYSATIMDIPSSVVYLYPHLISLHVIDPNSDEMPVQERCSFEKLQPDGAYL 107 (395)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Li~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 107 (395)
+.+.+++.|+|++.|..++++++..++..+||.|++.+.++.+....|....++.+...++++|+
T Consensus 590 ~~~~~~s~Der~~~~~~l~~~~~~~~l~~iyP~L~~~h~~~~~~~~~P~~v~ls~~~l~~~giyL 654 (766)
T 3eh2_A 590 QPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVESTTEPPAVRASEERLSNGDIYL 654 (766)
T ss_dssp SCCTTCCHHHHHHHHHHHHHCCHHHHHHHHSCEEEECSSCCCSCC--CCCBCSSGGGCCTTCEEE
T ss_pred cCCCCCCccHHHHHHHHHHCCCHHHHHHHHhheEEEeecCCcccccCCCCcCCcHHHcCCCcEEE
Confidence 34568999999999999999999999999999999998777665456666778888888888887
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.18 E-value=4.2 Score=36.34 Aligned_cols=110 Identities=12% Similarity=-0.004 Sum_probs=69.8
Q ss_pred CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCC----CceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEEC
Q psy13629 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV----GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 204 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~----~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~l 204 (395)
.+...|+|++ ++.||.. .++.+++.+...... .....|-..+...=..+.+|+ ++.||.. .++.|++.+.
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe--CCCEEEEeCC
Confidence 3556899999 6779988 667899888643110 011222222333346899995 8999999 3489999987
Q ss_pred --CCCc-----eEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEec
Q psy13629 205 --DGKK-----RKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAM 248 (395)
Q Consensus 205 --dg~~-----~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~ 248 (395)
++.. -..+.......-..|+++| +|.||-.. . .++++-..
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~-d--g~lyr~~~ 161 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH-G--QQFYKALP 161 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE-T--TEEEEECC
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe-C--CcEEecCC
Confidence 3322 1334434455668899998 77898776 3 44655433
No 323
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=90.93 E-value=6.7 Score=35.71 Aligned_cols=170 Identities=8% Similarity=-0.033 Sum_probs=90.5
Q ss_pred EEEEeeCCCCC-c-cEEecCCCCCeEEEEEEcCC-CEEEEEECCCCeEEEEEccCCCCCceEE--EEeCCCCCcceEEEe
Q psy13629 109 DIRIANLSRPL-K-PVTIIKDLEEGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHN--VITNGLITPDGLAID 183 (395)
Q Consensus 109 ~I~~~~l~~~~-~-~~~~~~~~~~~~gl~~d~~~-~~lywsd~~~~~I~~~~~dg~~~~~~~~--i~~~~~~~p~glAVD 183 (395)
.|++.++.... . ...+......+.+++|++.. +.++.+...++.|...++.+.. .... ...........++..
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~--~~~~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG--QWEVKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS--CEEECCBTTSSSSCBCCCEEC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC--CcceeeeeccccCCcceEEEc
Confidence 57777775521 1 22233345678899999873 4566676678889888887541 1111 111111233445544
Q ss_pred cCC----------------CeEEEEeCCCCeEEEEECCCCce---EEEEecCCCCceeEEEeCCC---CeEEEEeeCCCC
Q psy13629 184 WLT----------------EKLYWTDSETNKLEVSSLDGKKR---KVLYWEDIDQPRAIALVPQD---SIMFWTDWGEVP 241 (395)
Q Consensus 184 ~~~----------------~~LYwtd~~~~~I~v~~ldg~~~---~~l~~~~~~~P~~iavdp~~---g~LYwtd~~~~~ 241 (395)
+.. ++++.+-...+.|.+.++.+... ...+...-...++++++|.. +.+..+- +...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~-s~D~ 238 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC-SQDG 238 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE-ETTC
T ss_pred cccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEE-cCCC
Confidence 421 24556666677888888764421 11121234557899999875 2344444 3345
Q ss_pred eEEEEecCCCCcc--eEEEEecCCcCceeEEEeccccEEEEe
Q psy13629 242 KIERGAMNGDPRH--RKVIVDSTIFWPNGIAIDFNNRLLYWI 281 (395)
Q Consensus 242 ~I~~~~~dG~~~~--~~~lv~~~~~~P~glalD~~~~rLYwa 281 (395)
.|...+++..... ...++..+-.....+++.+.+..|..+
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence 6777766541011 111223333356677777666555443
No 324
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=90.45 E-value=11 Score=34.96 Aligned_cols=82 Identities=15% Similarity=-0.019 Sum_probs=56.2
Q ss_pred cEEecCCCCCeEEEEEEcCCCEEEEEECCCCe-EEEEEccCCCCCceEEEEe-C-CCCCcceEEEecCCCeEEEEeCCCC
Q psy13629 121 PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEM-ISCCTFDGNNVGSKHNVIT-N-GLITPDGLAIDWLTEKLYWTDSETN 197 (395)
Q Consensus 121 ~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~-I~~~~~dg~~~~~~~~i~~-~-~~~~p~glAVD~~~~~LYwtd~~~~ 197 (395)
...+......+.+++|++.++.|. +...+++ |...++... .....+. . .......+++++.+..| .+-...+
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~-s~s~d~~~v~iwd~~~~---~~~~~~~~g~h~~~v~~~~~s~~~~~l-~s~s~d~ 262 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVA-TCSQDGTIIRVFKTEDG---VLVREFRRGLDRADVVDMKWSTDGSKL-AVVSDKW 262 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEE-EEETTCSEEEEEETTTC---CEEEEEECTTCCSCEEEEEECTTSCEE-EEEETTC
T ss_pred cEEEEccCCceEEEEECCCCCEEE-EEeCCCCEEEEEECCCC---cEEEEEEcCCCCCcEEEEEECCCCCEE-EEEECCC
Confidence 344555667789999999776555 5557787 999999854 2233333 2 34668899999855555 4555678
Q ss_pred eEEEEECCCC
Q psy13629 198 KLEVSSLDGK 207 (395)
Q Consensus 198 ~I~v~~ldg~ 207 (395)
.|.+.++...
T Consensus 263 ~v~iw~~~~~ 272 (355)
T 3vu4_A 263 TLHVFEIFND 272 (355)
T ss_dssp EEEEEESSCC
T ss_pred EEEEEEccCC
Confidence 9999998643
No 325
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=89.96 E-value=10 Score=34.40 Aligned_cols=184 Identities=7% Similarity=-0.058 Sum_probs=98.5
Q ss_pred EEEEeeCCCCCc--cEEecCCCCCeEEEEEEcC-CCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC
Q psy13629 109 DIRIANLSRPLK--PVTIIKDLEEGAAIDYYYK-KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~~--~~~~~~~~~~~~gl~~d~~-~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~ 185 (395)
.|++.++..... ...+......+.+++|.+. .+.++.+...+++|...++..... .....+.........+++.+.
T Consensus 36 ~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~-~~~~~~~~h~~~V~~v~~~p~ 114 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW-EKSHEHAGHDSSVNSVCWAPH 114 (316)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC-CEEEEECCCSSCCCEEEECCT
T ss_pred eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc-eEEEEccCCCCceEEEEECCC
Confidence 577777754221 2233445667889999753 244555666788999888875321 111222233456788999875
Q ss_pred C-CeEEEEeCCCCeEEEEECCCCceEEEEe---cCCCCceeEEEeCCC----------------CeEEEEeeCCCCeEEE
Q psy13629 186 T-EKLYWTDSETNKLEVSSLDGKKRKVLYW---EDIDQPRAIALVPQD----------------SIMFWTDWGEVPKIER 245 (395)
Q Consensus 186 ~-~~LYwtd~~~~~I~v~~ldg~~~~~l~~---~~~~~P~~iavdp~~----------------g~LYwtd~~~~~~I~~ 245 (395)
. +.+..+-...+.|.+.++.+.....+.. ........++.+|.. +.++.+- +....|..
T Consensus 115 ~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-s~D~~v~l 193 (316)
T 3bg1_A 115 DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG-GCDNLIKL 193 (316)
T ss_dssp TTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECC-BTTSBCCE
T ss_pred CCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEe-cCCCeEEE
Confidence 3 5666677778889998887653222111 112334567777652 2344443 22344444
Q ss_pred EecCCCCcceE-EEEecCCcCceeEEEeccc---cEEEEeccceeeeeeeccc
Q psy13629 246 GAMNGDPRHRK-VIVDSTIFWPNGIAIDFNN---RLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 246 ~~~dG~~~~~~-~lv~~~~~~P~glalD~~~---~rLYwaD~~~~~I~~~~~d 294 (395)
.++++...... ..+..+-.+.+.+++.+.+ +.+..+-..+++|..-+++
T Consensus 194 Wd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 194 WKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp EEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred EEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 55543101111 1122344456777777554 2344444445566555544
No 326
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=89.69 E-value=11 Score=33.68 Aligned_cols=102 Identities=12% Similarity=0.041 Sum_probs=63.5
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCeEEEEECCC-------CceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEE
Q psy13629 173 GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG-------KKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIER 245 (395)
Q Consensus 173 ~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg-------~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~ 245 (395)
+......||+++ ++.||.. ..+.+++.+... ...+.+-......=.++.+|| +|.||.+. ..+|+|
T Consensus 39 gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav~---dG~iyr 111 (236)
T 1tl2_A 39 GWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAVS---KDKLYK 111 (236)
T ss_dssp SCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEEE---TTEEEE
T ss_pred ccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEeC---CCEEEE
Confidence 467888999999 9999998 567899988744 222233222333356889996 78999883 478999
Q ss_pred Eec--CCCCc---ceEEEEecCCcCceeEEEeccccEEEEec
Q psy13629 246 GAM--NGDPR---HRKVIVDSTIFWPNGIAIDFNNRLLYWID 282 (395)
Q Consensus 246 ~~~--dG~~~---~~~~lv~~~~~~P~glalD~~~~rLYwaD 282 (395)
.+. ++... ....+-+..-..-.-|..| .++.||-+.
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~-p~G~Lyav~ 152 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFH-PNGYLYAVH 152 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEEC-TTSCEEEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEEC-CCceEEEEe
Confidence 987 43110 1122222222223556666 455677665
No 327
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=89.15 E-value=0.15 Score=54.04 Aligned_cols=66 Identities=23% Similarity=0.341 Sum_probs=52.3
Q ss_pred eeecccccchhhHHHhhhhcccccceeeeeecceeeeeeecCCCC--------CCCCccCcccccccCCCCcee
Q psy13629 42 HLIRPEISLDDRSFALYSATIMDIPSSVVYLYPHLISLHVIDPNS--------DEMPVQERCSFEKLQPDGAYL 107 (395)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Li~~~~~~~~~--------~~~~~~~~C~~~~~~~~~~~~ 107 (395)
|..+.+++.|+|++.|+.++++++..++..+||.|++.++++.+. .+.|...+++.+...++++|+
T Consensus 570 ~~~~~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~h~l~~~~~~~~~~~~~~~P~~l~ls~~~l~~~giyL 643 (751)
T 3eh1_A 570 FRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFL 643 (751)
T ss_dssp TCCSSCCCHHHHHHHHHHHHHSCHHHHHHHHSCEEEECTTCCSTTCEEETTEEECCCCCBCSSGGGCCTTSEEE
T ss_pred hcCCCCCChhHHHHHHHHHhCCCHHHHHhhccceEEEeecCccccCcccCCCccCCCCcccCCHHHcccCCEEE
Confidence 445678899999999999999999999999999999998665432 134555667777777777776
No 328
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.01 E-value=24 Score=36.75 Aligned_cols=150 Identities=8% Similarity=-0.079 Sum_probs=88.2
Q ss_pred CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCC-----CCCcceEEEecCCCeEEEEeCCCCeEEEEE
Q psy13629 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG-----LITPDGLAIDWLTEKLYWTDSETNKLEVSS 203 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~-----~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ 203 (395)
..+.++..|.. +.|+.... +.|.+++.++.. ........ ...+.+|+.|. .++|++.... +-+.+++
T Consensus 450 ~~v~~i~~d~~-g~lwigt~--~Gl~~~~~~~~~---~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~-~Gl~~~~ 521 (781)
T 3v9f_A 450 LDVRVFYEDKN-KKIWIGTH--AGVFVIDLASKK---VIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFG-GGVGIYT 521 (781)
T ss_dssp CCEEEEEECTT-SEEEEEET--TEEEEEESSSSS---CCEEECTTTSSCSCSCEEEEEECT-TCCEEEEESS-SCEEEEC
T ss_pred CeEEEEEECCC-CCEEEEEC--CceEEEeCCCCe---EEecccCcccccccceeEEEEEcC-CCCEEEEEcC-CCEEEEe
Confidence 45777877754 45666543 678888877542 22222211 24578899996 6778776643 3488888
Q ss_pred CCCCceEEEEec-C--CCCceeEEEeCCCCeEEEEeeCCCCeE-EEEecCCCCcceEEEEecCCc----CceeEEEeccc
Q psy13629 204 LDGKKRKVLYWE-D--IDQPRAIALVPQDSIMFWTDWGEVPKI-ERGAMNGDPRHRKVIVDSTIF----WPNGIAIDFNN 275 (395)
Q Consensus 204 ldg~~~~~l~~~-~--~~~P~~iavdp~~g~LYwtd~~~~~~I-~~~~~dG~~~~~~~lv~~~~~----~P~glalD~~~ 275 (395)
.++...+.+... . ....++|+.|+ .|.|+++. ..-+ .+.+.++ ..-+. +...-+ ...+++.| .+
T Consensus 522 ~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~T---~~Glv~~~d~~~--~~~~~-~~~~~gl~~~~i~~i~~d-~~ 593 (781)
T 3v9f_A 522 PDMQLVRKFNQYEGFCSNTINQIYRSS-KGQMWLAT---GEGLVCFPSARN--FDYQV-FQRKEGLPNTHIRAISED-KN 593 (781)
T ss_dssp TTCCEEEEECTTTTCSCSCEEEEEECT-TSCEEEEE---TTEEEEESCTTT--CCCEE-ECGGGTCSCCCCCEEEEC-SS
T ss_pred CCCCeEEEccCCCCCCCCeeEEEEECC-CCCEEEEE---CCCceEEECCCC--CcEEE-ccccCCCCCceEEEEEEC-CC
Confidence 877654443311 1 23467888886 56787765 2345 7777655 22222 222211 34578888 56
Q ss_pred cEEEEeccceeeeeeeccccc
Q psy13629 276 RLLYWIDGRLTFIEVMDYDGY 296 (395)
Q Consensus 276 ~rLYwaD~~~~~I~~~~~dG~ 296 (395)
++||++- .+-|.+.+.+..
T Consensus 594 g~lW~~t--~~Gl~~~~~~~~ 612 (781)
T 3v9f_A 594 GNIWAST--NTGISCYITSKK 612 (781)
T ss_dssp SCEEEEC--SSCEEEEETTTT
T ss_pred CCEEEEc--CCceEEEECCCC
Confidence 7787775 234666666543
No 329
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.93 E-value=8 Score=38.68 Aligned_cols=176 Identities=6% Similarity=-0.087 Sum_probs=101.6
Q ss_pred EEEEeeCCCCCcc-----------EEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCc
Q psy13629 109 DIRIANLSRPLKP-----------VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP 177 (395)
Q Consensus 109 ~I~~~~l~~~~~~-----------~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p 177 (395)
.|++.++...... ..+......+.+++|++. +. ..+...+++|...+++... .........-...
T Consensus 236 tvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~-lasgs~DgtV~lWD~~~~~--~~~~~~~~H~~~V 311 (524)
T 2j04_B 236 TINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT-VVCGFKNGFVAEFDLTDPE--VPSFYDQVHDSYI 311 (524)
T ss_dssp CEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE-EEEEETTSEEEEEETTBCS--SCSEEEECSSSCE
T ss_pred eEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce-EEEEeCCCEEEEEECCCCC--CceEEeecccccE
Confidence 6777777652111 122334467889999864 44 4566688999999998532 1122233334456
Q ss_pred ceEEEec-CCC-eEEEEeCCCCeEEEEECCCCceE-EEEecC-CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCc
Q psy13629 178 DGLAIDW-LTE-KLYWTDSETNKLEVSSLDGKKRK-VLYWED-IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPR 253 (395)
Q Consensus 178 ~glAVD~-~~~-~LYwtd~~~~~I~v~~ldg~~~~-~l~~~~-~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~ 253 (395)
.+|+..+ ..+ ++..+-+..++|.+.++...... ++.... ......++++|.... +.+- +....|...++... .
T Consensus 312 ~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~-~~d~tv~lwd~~~~-~ 388 (524)
T 2j04_B 312 LSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS-YIYS-DGASSLRAVPSRAA-F 388 (524)
T ss_dssp EEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE-EEEE-CSSSEEEEEETTCT-T
T ss_pred EEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe-EEEe-CCCCcEEEEECccc-c
Confidence 7775432 234 77788888899999998654332 332221 224678999997655 4443 23455777776541 2
Q ss_pred ceEEEEecCCcCceeEEEeccccEEEEeccceeeeeeecc
Q psy13629 254 HRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 254 ~~~~lv~~~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~ 293 (395)
....+. .+....+.+++.+.+..|. +-..+++|..-+.
T Consensus 389 ~~~~l~-gH~~~V~sva~Sp~g~~l~-Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 389 AVHPLV-SRETTITAIGVSRLHPMVL-AGSADGSLIITNA 426 (524)
T ss_dssp CCEEEE-ECSSCEEEEECCSSCCBCE-EEETTTEEECCBS
T ss_pred cceeee-cCCCceEEEEeCCCCCeEE-EEECCCEEEEEec
Confidence 223333 3555778888886655443 3334455554444
No 330
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=87.87 E-value=17 Score=33.65 Aligned_cols=112 Identities=6% Similarity=0.011 Sum_probs=70.3
Q ss_pred EEEEcCCCEEEEE-ECCCCeEEEEEccCCCCC-----c-------e-EEEEeCCCCCcceEEEecCCCeEEEEeCCCCe-
Q psy13629 134 IDYYYKKSMVCWT-DHGTEMISCCTFDGNNVG-----S-------K-HNVITNGLITPDGLAIDWLTEKLYWTDSETNK- 198 (395)
Q Consensus 134 l~~d~~~~~lyws-d~~~~~I~~~~~dg~~~~-----~-------~-~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~- 198 (395)
.++.+ +.+.++ ...++.|...++...... . . ...+......+..+++++. +++..+-...++
T Consensus 143 ~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 143 CEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-SDMVATCSQDGTI 219 (355)
T ss_dssp EEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-SSEEEEEETTCSE
T ss_pred EEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-CCEEEEEeCCCCE
Confidence 34554 555555 556788888888753100 0 0 1223334456889999984 455556667787
Q ss_pred EEEEECCCCceEEEEe-c-CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 199 LEVSSLDGKKRKVLYW-E-DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 199 I~v~~ldg~~~~~l~~-~-~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
|.+.++....+...+. . .....++++++|...+|..+. ....|...++..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s--~d~~v~iw~~~~ 271 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS--DKWTLHVFEIFN 271 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE--TTCEEEEEESSC
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE--CCCEEEEEEccC
Confidence 9999998665554443 2 456789999999877776554 245677777654
No 331
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=85.48 E-value=29 Score=36.06 Aligned_cols=151 Identities=11% Similarity=-0.027 Sum_probs=84.8
Q ss_pred CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC--CCCCcceEEEecCCCeEEEEeCCCCeEEEEECCC
Q psy13629 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN--GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 206 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~--~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg 206 (395)
..+.++..|.. +.|++.. ..+.|.+++.+.. ....+... ....+..|+.|. .++|++... +.+.+++.++
T Consensus 407 ~~v~~i~~d~~-g~lWigt-~~~Gl~~~~~~~~---~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~ 478 (781)
T 3v9f_A 407 NSVLCSLKDSE-GNLWFGT-YLGNISYYNTRLK---KFQIIELEKNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDLAS 478 (781)
T ss_dssp SBEEEEEECTT-SCEEEEE-TTEEEEEECSSSC---EEEECCSTTTCCCCEEEEEECT-TSEEEEEET--TEEEEEESSS
T ss_pred cceEEEEECCC-CCEEEEe-ccCCEEEEcCCCC---cEEEeccCCCCCCeEEEEEECC-CCCEEEEEC--CceEEEeCCC
Confidence 34667777654 3454433 3456777766543 12222111 224567888886 678877765 6799999877
Q ss_pred CceEEEEecC-----CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec-CC--cCceeEEEeccccEE
Q psy13629 207 KKRKVLYWED-----IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS-TI--FWPNGIAIDFNNRLL 278 (395)
Q Consensus 207 ~~~~~l~~~~-----~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~-~~--~~P~glalD~~~~rL 278 (395)
.....+.... ...+++|+.|+ .|.|+++..+ .-+.+.+.++ ...+.+... .+ .....|..| .+++|
T Consensus 479 ~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~--~Gl~~~~~~~--~~~~~~~~~~~l~~~~i~~i~~d-~~g~l 552 (781)
T 3v9f_A 479 KKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFG--GGVGIYTPDM--QLVRKFNQYEGFCSNTINQIYRS-SKGQM 552 (781)
T ss_dssp SSCCEEECTTTSSCSCSCEEEEEECT-TCCEEEEESS--SCEEEECTTC--CEEEEECTTTTCSCSCEEEEEEC-TTSCE
T ss_pred CeEEecccCcccccccceeEEEEEcC-CCCEEEEEcC--CCEEEEeCCC--CeEEEccCCCCCCCCeeEEEEEC-CCCCE
Confidence 5544443222 35678899996 6778777632 3488887765 222222211 11 134567777 45667
Q ss_pred EEeccceeeeeeeccc
Q psy13629 279 YWIDGRLTFIEVMDYD 294 (395)
Q Consensus 279 YwaD~~~~~I~~~~~d 294 (395)
+++.. .+-|.+.+.+
T Consensus 553 Wi~T~-~Glv~~~d~~ 567 (781)
T 3v9f_A 553 WLATG-EGLVCFPSAR 567 (781)
T ss_dssp EEEET-TEEEEESCTT
T ss_pred EEEEC-CCceEEECCC
Confidence 66653 3332555544
No 332
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=85.33 E-value=25 Score=33.03 Aligned_cols=97 Identities=4% Similarity=-0.163 Sum_probs=64.1
Q ss_pred EEEEeeCCCCCccE-Ee----cCCCCCeEEEEEEc-------CCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCC
Q psy13629 109 DIRIANLSRPLKPV-TI----IKDLEEGAAIDYYY-------KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT 176 (395)
Q Consensus 109 ~I~~~~l~~~~~~~-~~----~~~~~~~~gl~~d~-------~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~ 176 (395)
.|++.+........ .. ......+.+++|.+ ..+++..+...+++|...++... .........-..
T Consensus 112 ~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~---~~~~~~~~~~~~ 188 (393)
T 4gq1_A 112 TVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE---GPILAGYPLSSP 188 (393)
T ss_dssp CEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT---EEEEEEEECSSC
T ss_pred cEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC---ceeeeecCCCCC
Confidence 56777765522211 11 12345688999986 24678888888999999998754 222333333455
Q ss_pred cceEEEecCCCeEEEEeCCCCeEEEEECCCCc
Q psy13629 177 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 208 (395)
Q Consensus 177 p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~ 208 (395)
+..++..+.+.++..+-...+.|.+.|+....
T Consensus 189 v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 189 GISVQFRPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred cEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence 67888888776677777778899999987643
No 333
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=85.17 E-value=35 Score=34.69 Aligned_cols=160 Identities=8% Similarity=-0.025 Sum_probs=103.0
Q ss_pred CCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCC----CCcceEEEecCCCeEEEEeCCCCeEEE
Q psy13629 126 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL----ITPDGLAIDWLTEKLYWTDSETNKLEV 201 (395)
Q Consensus 126 ~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~----~~p~glAVD~~~~~LYwtd~~~~~I~v 201 (395)
.....+.+++|++++..|-.+. .++.|...+.++ ....+ .+.. .....+++.+.++.|+.+. ..++|..
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s-~dg~V~iwd~~~----~l~~l-~~~~~~~~~sv~svafSPDG~~LAsgs-~DGtVkI 155 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLS-NNGNVSVFKDNK----MLTNL-DSKGNLSSRTYHCFEWNPIESSIVVGN-EDGELQF 155 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEE-TTSCEEEEETTE----EEEEC-CCSSCSTTTCEEEEEECSSSSCEEEEE-TTSEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEe-CCCcEEEEeCCc----eeeec-cCCCccccccEEEEEEcCCCCEEEEEc-CCCEEEE
Confidence 3367799999999998887766 677777777443 11111 1111 2477899999888887665 5789999
Q ss_pred EECCCCce--------EEEE---ecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcc--eEEEEecCCcCcee
Q psy13629 202 SSLDGKKR--------KVLY---WEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRH--RKVIVDSTIFWPNG 268 (395)
Q Consensus 202 ~~ldg~~~--------~~l~---~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~--~~~lv~~~~~~P~g 268 (395)
.++.+... .++- .........++.+|++ ..+- +....|...+.++.... .+++-..+-....+
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laas-s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAA-LSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEE-ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEE-eCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 99998742 2221 1223589999999965 3343 33567888888873211 12332233345777
Q ss_pred EEEeccccEEEEeccceeeeeeeccccceeee
Q psy13629 269 IAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 269 lalD~~~~rLYwaD~~~~~I~~~~~dG~~~~~ 300 (395)
+++. ++.|-.+. .+.|..-+.++.....
T Consensus 232 vaFs--g~~LASa~--~~tIkLWd~~~~~~~~ 259 (588)
T 2j04_A 232 LKIV--DYKVVLTC--PGYVHKIDLKNYSISS 259 (588)
T ss_dssp EEEE--TTEEEEEC--SSEEEEEETTTTEEEE
T ss_pred EEEE--CCEEEEEe--CCeEEEEECCCCeEEE
Confidence 7776 56666664 4788888877766644
No 334
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=84.19 E-value=28 Score=32.77 Aligned_cols=183 Identities=10% Similarity=0.025 Sum_probs=111.2
Q ss_pred EEEEeeCCCCCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCe
Q psy13629 109 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~ 188 (395)
.|++.++.................+++++ +. +..+...++.+...+..... ..............++...+.+..
T Consensus 170 ~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~-~l~sgs~d~~i~~~d~~~~~--~~~~~~~~h~~~~~~~~~~~~g~~ 244 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAE--HHVATLSGHSQEVCGLRWAPDGRH 244 (420)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSE
T ss_pred eEEEEEcCCCcEEEEEeCCCCceEEEeeC--CC-EEEEEeCCCceeEeeecccc--eeeEEecccccceeeeeecCCCCe
Confidence 67888887633344444455667777776 34 44555578888888876542 223334445566778888875555
Q ss_pred EEEEeCCCCeEEEEECCCCce----EEEEecCCCCceeEEEeCCCCeEEEEeeC-CCCeEEEEecCCCCcceEEEEecCC
Q psy13629 189 LYWTDSETNKLEVSSLDGKKR----KVLYWEDIDQPRAIALVPQDSIMFWTDWG-EVPKIERGAMNGDPRHRKVIVDSTI 263 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~----~~l~~~~~~~P~~iavdp~~g~LYwtd~~-~~~~I~~~~~dG~~~~~~~lv~~~~ 263 (395)
+ .+-...+.|.+.+...... .............++..|..+.++.+--+ ....|...++.. ......+. .-
T Consensus 245 l-~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t--~~~~~~~~-~~ 320 (420)
T 4gga_A 245 L-ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS--GACLSAVD-AH 320 (420)
T ss_dssp E-EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT--TEEEEEEE-CS
T ss_pred e-eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc--cccceeec-cc
Confidence 5 4555677888888764321 11222334567889999988887776534 345677777765 22222222 23
Q ss_pred cCceeEEEeccccEEEEecc-ceeeeeeeccccceeee
Q psy13629 264 FWPNGIAIDFNNRLLYWIDG-RLTFIEVMDYDGYVRLV 300 (395)
Q Consensus 264 ~~P~glalD~~~~rLYwaD~-~~~~I~~~~~dG~~~~~ 300 (395)
..+..+.....++.|+.+-. ..+.|..-++.......
T Consensus 321 ~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~ 358 (420)
T 4gga_A 321 SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA 358 (420)
T ss_dssp SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE
T ss_pred cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEE
Confidence 35777788878888877653 35667776765444433
No 335
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=84.11 E-value=37 Score=34.12 Aligned_cols=30 Identities=17% Similarity=0.081 Sum_probs=21.6
Q ss_pred EEEEEEcCCCEEEEEECC---------------CCeEEEEEccCC
Q psy13629 132 AAIDYYYKKSMVCWTDHG---------------TEMISCCTFDGN 161 (395)
Q Consensus 132 ~gl~~d~~~~~lywsd~~---------------~~~I~~~~~dg~ 161 (395)
..+++|+..+.|||.... .+.|..++.+..
T Consensus 238 ~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG 282 (571)
T 2ad6_A 238 GWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTG 282 (571)
T ss_dssp SCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTC
T ss_pred eeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCC
Confidence 357899999999998642 135888887654
No 336
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=83.47 E-value=38 Score=35.29 Aligned_cols=148 Identities=9% Similarity=-0.036 Sum_probs=82.1
Q ss_pred CeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC--------CCCCcceEEEecCCCe-EEEEeCCCCeEE
Q psy13629 130 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN--------GLITPDGLAIDWLTEK-LYWTDSETNKLE 200 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~--------~~~~p~glAVD~~~~~-LYwtd~~~~~I~ 200 (395)
.+.++..|..+ .|+.. ...+-|.+++.+.. ........ ....+.+|+.|. .++ |++.. ..+.|.
T Consensus 358 ~V~~i~~d~~g-~lWiG-t~~~Gl~~~~~~~~---~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt-~~~Gl~ 430 (795)
T 4a2l_A 358 VVSCIVEDKDK-NLWIG-TNDGGLNLYNPITQ---RFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGT-HAGGLS 430 (795)
T ss_dssp SEEEEEECTTS-CEEEE-ESSSCEEEECTTTC---CEEEECCC------CCSCSCEEEEEEET-TTTEEEEEE-TTTEEE
T ss_pred eeEEEEECCCC-CEEEE-ECCCCeEEEcCCCC---cEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEe-CcCcee
Confidence 46788887654 34443 34556777776643 22222211 124567888886 566 66554 345689
Q ss_pred EEECCCCceEEEEec----CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec----C--CcCceeEE
Q psy13629 201 VSSLDGKKRKVLYWE----DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS----T--IFWPNGIA 270 (395)
Q Consensus 201 v~~ldg~~~~~l~~~----~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~----~--~~~P~gla 270 (395)
+++.++.....+... .....++|+.|+ .|.|++... ..+.+.+.+. ..-+.+... . ......+.
T Consensus 431 ~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~---~Gl~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~i~ 504 (795)
T 4a2l_A 431 ILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTL---SALVRFNPEQ--RSFTTIEKEKDGTPVVSKQITTLF 504 (795)
T ss_dssp EEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEES---SCEEEEETTT--TEEEECCBCTTCCBCCCCCEEEEE
T ss_pred EEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEec---CceeEEeCCC--CeEEEccccccccccCCceEEEEE
Confidence 999876655444311 124578888886 667877763 3477777664 222222111 1 12456677
Q ss_pred EeccccEEEEeccceeeeeeecc
Q psy13629 271 IDFNNRLLYWIDGRLTFIEVMDY 293 (395)
Q Consensus 271 lD~~~~rLYwaD~~~~~I~~~~~ 293 (395)
.| .+++||++.. +-+.+.+.
T Consensus 505 ~d-~~g~lWigt~--~Gl~~~~~ 524 (795)
T 4a2l_A 505 RD-SHKRLWIGGE--EGLSVFKQ 524 (795)
T ss_dssp EC-TTCCEEEEES--SCEEEEEE
T ss_pred EC-CCCCEEEEeC--CceEEEeC
Confidence 77 4566766653 33444443
No 337
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=81.99 E-value=26 Score=30.82 Aligned_cols=153 Identities=6% Similarity=-0.062 Sum_probs=97.9
Q ss_pred EecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCC-ceEEEEeCCCCCcceEEEecCCCeEEEE--eCCCCeE
Q psy13629 123 TIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG-SKHNVITNGLITPDGLAIDWLTEKLYWT--DSETNKL 199 (395)
Q Consensus 123 ~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~-~~~~i~~~~~~~p~glAVD~~~~~LYwt--d~~~~~I 199 (395)
...........+++.+.++.|.-. ..++.|...++...... ...............++..+..+.+.++ ....+.|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i 223 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASG-GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 223 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEE
T ss_pred EEcCccCceEEEEEcCCCCEEEEE-ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEE
Confidence 344556678888898887766644 47888988888643211 1112222233455677777766666543 3456788
Q ss_pred EEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEE
Q psy13629 200 EVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLY 279 (395)
Q Consensus 200 ~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLY 279 (395)
.+.+.......... ........+++.|..+.++.+.-.....|...++.. ......+..+....+.|++.+++..|.
T Consensus 224 ~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~--~~~~~~l~gH~~~V~~l~~spdg~~l~ 300 (318)
T 4ggc_A 224 RIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT--MAKVAELKGHTSRVLSLTMSPDGATVA 300 (318)
T ss_dssp EEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred EEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCC--CcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 88888877665554 456678889999999888876523456788888865 233223344555678888886666554
No 338
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=80.78 E-value=54 Score=33.67 Aligned_cols=30 Identities=7% Similarity=-0.088 Sum_probs=18.9
Q ss_pred eeEEEeccccEEEEeccceeeeeeeccccce
Q psy13629 267 NGIAIDFNNRLLYWIDGRLTFIEVMDYDGYV 297 (395)
Q Consensus 267 ~glalD~~~~rLYwaD~~~~~I~~~~~dG~~ 297 (395)
.+-++...++.||... ..+.+..++.....
T Consensus 480 ~~g~~~~~g~~v~~g~-~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQGT-ADGRLVAYHAATGE 509 (677)
T ss_dssp CCCEEEETTTEEEEEC-TTSEEEEEETTTCC
T ss_pred cCcceEeCCCEEEEEC-CCCcEEEEECCCCc
Confidence 4445555677888873 46777777765333
No 339
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=80.46 E-value=36 Score=31.39 Aligned_cols=133 Identities=8% Similarity=-0.027 Sum_probs=70.3
Q ss_pred CCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEe-cCCC
Q psy13629 140 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYW-EDID 218 (395)
Q Consensus 140 ~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~-~~~~ 218 (395)
++.||+.. ..+.+..++..... .. -......+.+++++ +++||+++. .+.+..++.......-... ....
T Consensus 239 ~~~v~~~~-~~g~l~~~d~~tG~---~~--w~~~~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~~~~~ 309 (376)
T 3q7m_A 239 NGVVFALA-YNGNLTALDLRSGQ---IM--WKRELGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDGGVTLWTQSDLLHR 309 (376)
T ss_dssp TTEEEEEC-TTSCEEEEETTTCC---EE--EEECCCCEEEEEEE--TTEEEEEET-TCCEEEEETTTCCEEEEECTTTTS
T ss_pred CCEEEEEe-cCcEEEEEECCCCc---EE--eeccCCCCCCceEE--CCEEEEEcC-CCeEEEEECCCCcEEEeecccCCC
Confidence 45666654 45667777765331 11 11123445677776 789998875 5679999986554432221 1122
Q ss_pred CceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEec-CCcCceeEEEeccccEEEEeccceeeeee
Q psy13629 219 QPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS-TIFWPNGIAIDFNNRLLYWIDGRLTFIEV 290 (395)
Q Consensus 219 ~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~-~~~~P~glalD~~~~rLYwaD~~~~~I~~ 290 (395)
.....++. ++.||+.+. ...+...+... ......... .........+. +++||+.... +.|..
T Consensus 310 ~~~~~~~~--~~~l~v~~~--~g~l~~~d~~t--G~~~~~~~~~~~~~~~~~~~~--~~~l~v~~~~-G~l~~ 373 (376)
T 3q7m_A 310 LLTSPVLY--NGNLVVGDS--EGYLHWINVED--GRFVAQQKVDSSGFQTEPVAA--DGKLLIQAKD-GTVYS 373 (376)
T ss_dssp CCCCCEEE--TTEEEEECT--TSEEEEEETTT--CCEEEEEECCTTCBCSCCEEE--TTEEEEEBTT-SCEEE
T ss_pred cccCCEEE--CCEEEEEeC--CCeEEEEECCC--CcEEEEEecCCCcceeCCEEE--CCEEEEEeCC-CEEEE
Confidence 23344554 688998872 35688888643 122111111 11111222333 6788888743 34443
No 340
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=78.11 E-value=68 Score=33.27 Aligned_cols=149 Identities=11% Similarity=-0.040 Sum_probs=86.2
Q ss_pred CCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC----CCCCcceEEEecCCCeEEEEeCCCCeEEEEEC
Q psy13629 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN----GLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 204 (395)
Q Consensus 129 ~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~----~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~l 204 (395)
..+.++..|..++.|+.. ...+.|.+++.++. ....+... ....+..|+.|. .++|++... +.+.+++.
T Consensus 406 ~~v~~i~~d~~g~~lWig-t~~~Gl~~~d~~~~---~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~ 478 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIG-THAGGLSILHRNSG---QVENFNQRNSQLVNENVYAILPDG-EGNLWLGTL--SALVRFNP 478 (795)
T ss_dssp SCEEEEEEETTTTEEEEE-ETTTEEEEEETTTC---CEEEECTTTSCCSCSCEEEEEECS-SSCEEEEES--SCEEEEET
T ss_pred ccEEEEEEcCCCCEEEEE-eCcCceeEEeCCCC---cEEEeecCCCCcCCCeeEEEEECC-CCCEEEEec--CceeEEeC
Confidence 457788888765435544 34567888887754 22222211 123567888886 677877765 56889998
Q ss_pred CCCceEEEEec----C--CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe--c--C--CcCceeEEEe
Q psy13629 205 DGKKRKVLYWE----D--IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD--S--T--IFWPNGIAID 272 (395)
Q Consensus 205 dg~~~~~l~~~----~--~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~--~--~--~~~P~glalD 272 (395)
++...+.+... . ....++|+.|+ .|.|++... .-+.+.+.++ ... .+.. . . ......|..|
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~---~Gl~~~~~~~--~~~-~~~~~~~~~~l~~~~i~~i~~d 551 (795)
T 4a2l_A 479 EQRSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGE---EGLSVFKQEG--LDI-QKASILPVSNVTKLFTNCIYEA 551 (795)
T ss_dssp TTTEEEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEES---SCEEEEEEET--TEE-EECCCSCSCGGGGSCEEEEEEC
T ss_pred CCCeEEEccccccccccCCceEEEEEECC-CCCEEEEeC---CceEEEeCCC--CeE-EEecCCCCCCCCCCeeEEEEEC
Confidence 76554433211 1 24567888885 667877762 3588887765 222 2211 1 1 1235567777
Q ss_pred ccccEEEEeccceeeeeeeccc
Q psy13629 273 FNNRLLYWIDGRLTFIEVMDYD 294 (395)
Q Consensus 273 ~~~~rLYwaD~~~~~I~~~~~d 294 (395)
.+++|+++-.+ -+.+.+.+
T Consensus 552 -~~g~lWigT~~--Gl~~~d~~ 570 (795)
T 4a2l_A 552 -SNGIIWVGTRE--GFYCFNEK 570 (795)
T ss_dssp -TTSCEEEEESS--CEEEEETT
T ss_pred -CCCCEEEEeCC--CceeECCC
Confidence 45667665432 45555543
No 341
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=75.75 E-value=73 Score=32.40 Aligned_cols=121 Identities=20% Similarity=0.334 Sum_probs=72.3
Q ss_pred EEEEEccCCCCCceEEEEeCCCCCcce-EEEecCCCeE--EEE-eC-----------CCCeEEEEECCCCceEEEEecCC
Q psy13629 153 ISCCTFDGNNVGSKHNVITNGLITPDG-LAIDWLTEKL--YWT-DS-----------ETNKLEVSSLDGKKRKVLYWEDI 217 (395)
Q Consensus 153 I~~~~~dg~~~~~~~~i~~~~~~~p~g-lAVD~~~~~L--Ywt-d~-----------~~~~I~v~~ldg~~~~~l~~~~~ 217 (395)
+..+.+||. ....+...+.-...- .|.||.+++| -|. |. ..+.+.++|+||..+..++...
T Consensus 274 ~~vayLDG~---~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs- 349 (620)
T 2zuy_A 274 AGTAYLDGE---RPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGA- 349 (620)
T ss_dssp EEEECTTCC----CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETT-
T ss_pred eeEEecCCC---CceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEee-
Confidence 344556664 233344333322222 3678877754 333 32 2378999999999888777432
Q ss_pred CCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe-cCCcCceeEE-EeccccEEEEec
Q psy13629 218 DQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD-STIFWPNGIA-IDFNNRLLYWID 282 (395)
Q Consensus 218 ~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~-~~~~~P~gla-lD~~~~rLYwaD 282 (395)
.++|.....||-+..+....+...++|......+++.- ++-..|.|.+ .|...+.++|.-
T Consensus 350 -----~~iD~dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~ 411 (620)
T 2zuy_A 350 -----MAVDHDGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGV 411 (620)
T ss_dssp -----EEECTTSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred -----eEECCCCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEe
Confidence 57886665666555555677899999875445555432 3223466775 466567777763
No 342
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=66.97 E-value=65 Score=28.12 Aligned_cols=131 Identities=6% Similarity=0.038 Sum_probs=76.9
Q ss_pred EEEEeeCCCCCccEEec---CCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCCCCcceEEEecC
Q psy13629 109 DIRIANLSRPLKPVTII---KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~---~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~~~p~glAVD~~ 185 (395)
.|++.|+.. .+..... .....+.+++|++.++.|. +...++.|...++... ............. .++.+.
T Consensus 46 tV~iWd~~t-g~~~~~~~~~~~~~~V~~v~~~~~~~~l~-sgs~Dg~v~iw~~~~~---~~~~~~~~h~~~~--~~~~~~ 118 (318)
T 4ggc_A 46 SVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEGNYLA-VGTSSAEVQLWDVQQQ---KRLRNMTSHSARV--GSLSWN 118 (318)
T ss_dssp EEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTSSEEE-EEETTSEEEEEETTTT---EEEEEEECCSSCE--EEEEEE
T ss_pred EEEEEECCC-CCEEEEEEecCCCCeEEEEEECCCCCEEE-EEECCCcEEEeecCCc---eeEEEecCccceE--EEeecC
Confidence 688888876 3333222 2345688999999887665 5557889999998865 2222222222223 344443
Q ss_pred CCeEEEEeCCCCeEEEEECCCCceEE-EEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecC
Q psy13629 186 TEKLYWTDSETNKLEVSSLDGKKRKV-LYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMN 249 (395)
Q Consensus 186 ~~~LYwtd~~~~~I~v~~ldg~~~~~-l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~d 249 (395)
...+ .+....+.+...+........ ...........++..+...+|.-+. ....|...++.
T Consensus 119 ~~~l-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~--~d~~i~iwd~~ 180 (318)
T 4ggc_A 119 SYIL-SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG--NDNLVNVWPSA 180 (318)
T ss_dssp TTEE-EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE--TTSCEEEEESS
T ss_pred CCEE-EEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEe--cCcceeEEECC
Confidence 4444 454556667777666554433 3334456677888888776665444 23456666654
No 343
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=66.73 E-value=1.2e+02 Score=31.07 Aligned_cols=70 Identities=9% Similarity=-0.011 Sum_probs=44.9
Q ss_pred ceEEEecCCCeEEEEeCC------------------------------------------CCeEEEEECCCCceEEEEec
Q psy13629 178 DGLAIDWLTEKLYWTDSE------------------------------------------TNKLEVSSLDGKKRKVLYWE 215 (395)
Q Consensus 178 ~glAVD~~~~~LYwtd~~------------------------------------------~~~I~v~~ldg~~~~~l~~~ 215 (395)
.++|+|+.++.+|..... .+.|...|+......=-+..
T Consensus 396 ~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~ 475 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH 475 (677)
T ss_dssp SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC
Confidence 578999999999986321 15677888765443322211
Q ss_pred CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCC
Q psy13629 216 DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 216 ~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG 250 (395)
...+.+.++...++.+|... ....+..++...
T Consensus 476 -~~~~~~g~~~~~g~~v~~g~--~dg~l~a~D~~t 507 (677)
T 1kb0_A 476 -VSPWNGGTLTTAGNVVFQGT--ADGRLVAYHAAT 507 (677)
T ss_dssp -SSSCCCCEEEETTTEEEEEC--TTSEEEEEETTT
T ss_pred -CCCCcCcceEeCCCEEEEEC--CCCcEEEEECCC
Confidence 22245666777788888874 356788888753
No 344
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=65.80 E-value=2.1 Score=45.28 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=49.1
Q ss_pred eeeecccccchhhHHHhhhhcccccceeeeeecceeeeeeecCCCCCCCCccCcccccccCCCCceeE
Q psy13629 41 PHLIRPEISLDDRSFALYSATIMDIPSSVVYLYPHLISLHVIDPNSDEMPVQERCSFEKLQPDGAYLL 108 (395)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Li~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 108 (395)
|++-....+.|+|++.|+.++++++..++..+||.|++.+... .|....++.+...++++|+-
T Consensus 592 ~~l~~~~~spDer~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~-----~P~~v~ls~~~l~~~gi~LL 654 (769)
T 2nut_A 592 SFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSG-----PPEPVLLDSSSILADRILLM 654 (769)
T ss_dssp TTTCCTTSCHHHHHHHHHHHTTCCHHHHHHHHSCEEEEECSSS-----SCEECCSSGGGCCTTCEEEE
T ss_pred cccCCCCCCccHHHHHHHHHHcCCHHHHHHhhcCEEEeccCCC-----CCCceeCCHHHccCCCEEEE
Confidence 3444458899999999999999999999999999999987421 24445666777777777763
No 345
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=65.07 E-value=1.9 Score=46.55 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=36.9
Q ss_pred eeeecccccchhhHHHhhhhcccccceeeeeecceeeeeeecCC
Q psy13629 41 PHLIRPEISLDDRSFALYSATIMDIPSSVVYLYPHLISLHVIDP 84 (395)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Li~~~~~~~ 84 (395)
+++-+..+..|+|++.|+++++++...++..+||.|++.+.+..
T Consensus 721 ~~l~~~~~p~Dera~~~~~l~~~~~~~l~~~iyP~L~s~h~~~~ 764 (926)
T 1m2v_B 721 MAFRSGIVPSDHRASALNNLESLPLKYLIKNIYPDVYSLHDMAD 764 (926)
T ss_dssp TTTCSSCCCHHHHHHHHHHHHHSCHHHHHHHHSCEEEETTTCCS
T ss_pred hhhCCCCCCccHHHHHHHHHHcCCHHHHHHhccCeEEEeccCcc
Confidence 34445567779999999999999999999999999999976543
No 346
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=64.97 E-value=2 Score=45.75 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=36.9
Q ss_pred eeeecccccchhhHHHhhhhcccccceeeeeecceeeeeeecCC
Q psy13629 41 PHLIRPEISLDDRSFALYSATIMDIPSSVVYLYPHLISLHVIDP 84 (395)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Li~~~~~~~ 84 (395)
|++-+..+..|+|++.|+++++++...++..+||.|++.+.++.
T Consensus 605 ~~l~~~~~p~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~ 648 (810)
T 1pcx_A 605 MAFRSGIVPSDHRASALNNLESLPLKYLIKNIYPDVYSLHDMAD 648 (810)
T ss_dssp TTTCSSCCCHHHHHHHHHHHHHSCHHHHHHHHSCEEEECTTCCS
T ss_pred hhcCCCCCCccHHHHHHHHHHcCCHHHHHHhccCEEEEeccCcc
Confidence 34445566779999999999999999999999999999976543
No 347
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=63.96 E-value=1.3e+02 Score=30.63 Aligned_cols=16 Identities=6% Similarity=0.357 Sum_probs=13.3
Q ss_pred eeEEEeCCCCeEEEEe
Q psy13629 221 RAIALVPQDSIMFWTD 236 (395)
Q Consensus 221 ~~iavdp~~g~LYwtd 236 (395)
.++++||.++.+|+..
T Consensus 384 ~~~a~dp~~g~~yv~~ 399 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPY 399 (668)
T ss_dssp SCCEEETTTTEEEEEE
T ss_pred CcceECCCCCEEEEec
Confidence 4589999999999853
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=63.47 E-value=22 Score=36.22 Aligned_cols=160 Identities=9% Similarity=-0.014 Sum_probs=102.7
Q ss_pred EEEEeeCCC----CCccEEecCCCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCC------CC-CceEEEEeC--CCC
Q psy13629 109 DIRIANLSR----PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGN------NV-GSKHNVITN--GLI 175 (395)
Q Consensus 109 ~I~~~~l~~----~~~~~~~~~~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~------~~-~~~~~i~~~--~~~ 175 (395)
.+.++|... ...++..++..++|.|+.++|+++.++.++..+.++.+++.+.- .+ ..+..++.. ..-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 356676644 34688888999999999999999999999999999999987731 11 011112221 224
Q ss_pred CcceEEEecCCCeEEEEeCCCCeEEEEECCCC-------ceEEEEe--cCCCCceeEE------EeCCCCeEEEEeeC--
Q psy13629 176 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK-------KRKVLYW--EDIDQPRAIA------LVPQDSIMFWTDWG-- 238 (395)
Q Consensus 176 ~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~-------~~~~l~~--~~~~~P~~ia------vdp~~g~LYwtd~~-- 238 (395)
.|...++|. .|+.|-|-...++|.+-+++.. ....++. ...-+|--+. .+|+.++|..-+--
T Consensus 379 GPlHt~Fd~-~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~sk 457 (638)
T 3sbq_A 379 GPLHTTFDG-RGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSK 457 (638)
T ss_dssp CEEEEEECS-SSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCT
T ss_pred cccEEEECC-CCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccccc
Confidence 799999998 5699988888889998887642 2222221 2234454443 36666676644411
Q ss_pred ---------CCCeEEEEecCCCCcceEEEEec-CCcCceeEEE
Q psy13629 239 ---------EVPKIERGAMNGDPRHRKVIVDS-TIFWPNGIAI 271 (395)
Q Consensus 239 ---------~~~~I~~~~~dG~~~~~~~lv~~-~~~~P~glal 271 (395)
....-..+++.| ..-+++.+. .+..|+...+
T Consensus 458 drfl~vGpl~pen~QlidIsG--dkM~lv~D~P~~~EPHda~~ 498 (638)
T 3sbq_A 458 DRFLPVGPLHPENDQLIDISG--DEMKLVHDGPTFAEPHDCIM 498 (638)
T ss_dssp TSSCCCSSSCCEEEEEEECSS--SSCEEEEEEEESSCCCCEEE
T ss_pred ccCcCCCCCCCCcceeEecCC--CceEEEecCCCCCCCcceEE
Confidence 113457788888 555555543 3556775544
No 349
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=63.28 E-value=1.4e+02 Score=30.79 Aligned_cols=116 Identities=10% Similarity=0.064 Sum_probs=69.0
Q ss_pred CeEEEEEEcCC-CEEEEEECCCCeEEEEEccCCCCCceEEEEeC-C-----CCCcceEEEecC-CCeEEEEeCC------
Q psy13629 130 EGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-G-----LITPDGLAIDWL-TEKLYWTDSE------ 195 (395)
Q Consensus 130 ~~~gl~~d~~~-~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~-~-----~~~p~glAVD~~-~~~LYwtd~~------ 195 (395)
++.+|++++.+ +.||. ....+.|+|..-.|. ..+.+... . ......|++|+. .+.||.+-..
T Consensus 24 ~i~~i~~~p~~~~~~~~-~~~~ggv~rS~D~G~---tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~ 99 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYA-RAAIGGAYRWDPSTE---TWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWL 99 (737)
T ss_dssp CCCEEEECSSSTTCEEE-ECSSSCEEEEETTTT---EEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSS
T ss_pred eeeEEEECCCCCCEEEE-EecCCcEEEeCCCCC---CEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccc
Confidence 78899999876 45554 445577888875554 34443221 1 234678999984 4688887532
Q ss_pred --CCeEEEEECCCCceEEEEecC-C--C-----CceeEEEeCCC-CeEEEEeeCCCCeEEEEecCC
Q psy13629 196 --TNKLEVSSLDGKKRKVLYWED-I--D-----QPRAIALVPQD-SIMFWTDWGEVPKIERGAMNG 250 (395)
Q Consensus 196 --~~~I~v~~ldg~~~~~l~~~~-~--~-----~P~~iavdp~~-g~LYwtd~~~~~~I~~~~~dG 250 (395)
...|++..=.|+.-+.+.... . . ....|++||.+ +.||..... ...|++..=.|
T Consensus 100 ~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~-g~gl~~S~DgG 164 (737)
T 2cn3_A 100 PNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC-GNGLWRSTDYG 164 (737)
T ss_dssp CCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST-TCCEEEESSTT
T ss_pred cCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc-CCcEEEeCCCC
Confidence 356777765665544443211 0 0 12589999975 678776521 14566654444
No 350
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=60.96 E-value=1.3e+02 Score=29.62 Aligned_cols=183 Identities=7% Similarity=-0.170 Sum_probs=97.8
Q ss_pred EEEEEeeCCCCCcc----EEecCCCCCeEEEEEEcC-----CCEEEEEECCCCeEEEEEccCCCCCceE--------EEE
Q psy13629 108 LDIRIANLSRPLKP----VTIIKDLEEGAAIDYYYK-----KSMVCWTDHGTEMISCCTFDGNNVGSKH--------NVI 170 (395)
Q Consensus 108 ~~I~~~~l~~~~~~----~~~~~~~~~~~gl~~d~~-----~~~lywsd~~~~~I~~~~~dg~~~~~~~--------~i~ 170 (395)
..|++.++++.... ..+....+.+..++|.+. .+.+..+...++.|...+++........ ..+
T Consensus 183 ~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l 262 (524)
T 2j04_B 183 SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL 262 (524)
T ss_dssp EEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE
T ss_pred ceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE
Confidence 36777777652211 123334567899999986 1345666667889999988754211000 111
Q ss_pred eCCCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCC-ceEEEEecCCCCceeEE-EeCCCC-eEEEEeeCCCCeEEEEe
Q psy13629 171 TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK-KRKVLYWEDIDQPRAIA-LVPQDS-IMFWTDWGEVPKIERGA 247 (395)
Q Consensus 171 ~~~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~-~~~~l~~~~~~~P~~ia-vdp~~g-~LYwtd~~~~~~I~~~~ 247 (395)
...-....+++..+ .+ ...+-..++.|...++... .....+...-...++|+ ..+..+ .++.|- +....|...+
T Consensus 263 ~~h~~~v~sv~~s~-~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~-S~D~tvklWD 339 (524)
T 2j04_B 263 SLADSLITTFDFLS-PT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTV-AVDGYFYIFN 339 (524)
T ss_dssp CCTTTCEEEEEESS-SS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEE-ETTSEEEEEC
T ss_pred EcCCCCEEEEEecC-CC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEe-ccCCeEEEEE
Confidence 11223455566554 33 4456667899999999843 33233333445567774 223344 666665 3356677777
Q ss_pred cCCCCcceEEEEec-CCcCceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 248 MNGDPRHRKVIVDS-TIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 248 ~dG~~~~~~~lv~~-~~~~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
+... ....++... .......+++.++++. +.+-...+.|...++..
T Consensus 340 ~~~~-~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 340 PKDI-ATTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRA 386 (524)
T ss_dssp GGGH-HHHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTC
T ss_pred CCCC-CcccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECcc
Confidence 7531 111222221 1112456788866554 44433445565555443
No 351
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=58.74 E-value=3.5 Score=43.65 Aligned_cols=63 Identities=22% Similarity=0.202 Sum_probs=49.2
Q ss_pred eeeecccccchhhHHHhhhhcccccceeeeeecceeeeeeecCCCCCCCCccCcccccccCCCCceeE
Q psy13629 41 PHLIRPEISLDDRSFALYSATIMDIPSSVVYLYPHLISLHVIDPNSDEMPVQERCSFEKLQPDGAYLL 108 (395)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Li~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 108 (395)
|++-....+.|+|.+.|+.++++++..++..+||.|++.+.. ..|....++.+...++++|+-
T Consensus 594 ~~l~~~~~spDer~~~~~~l~~~~~~~~l~~iyP~L~~~~~~-----~~P~~v~Ls~~~l~~~gi~LL 656 (768)
T 1m2o_A 594 QFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQPTLTSFSME-----DDPQPVLLDSISVKPNTILLL 656 (768)
T ss_dssp TTTCCTTSCHHHHHHHHHHHTTSCHHHHHHHHSCEEEEECSS-----SCCEECCSBGGGCCTTCEEEE
T ss_pred cccCCCCCChhHHHHHHHHHHcCCHHHHHHhhCCeEEEecCC-----CCCcceeCcHHHcCCCCEEEE
Confidence 444445889999999999999999999999999999998742 134445666677777777763
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=56.95 E-value=1e+02 Score=28.69 Aligned_cols=154 Identities=14% Similarity=0.001 Sum_probs=82.0
Q ss_pred CCCeEEEEEEc-CCCEEEEEECCCC----eEEEEEccCCCCCceEEEEeC-CC------------CCcceEEEecC--CC
Q psy13629 128 LEEGAAIDYYY-KKSMVCWTDHGTE----MISCCTFDGNNVGSKHNVITN-GL------------ITPDGLAIDWL--TE 187 (395)
Q Consensus 128 ~~~~~gl~~d~-~~~~lywsd~~~~----~I~~~~~dg~~~~~~~~i~~~-~~------------~~p~glAVD~~--~~ 187 (395)
...+.+|++|+ ..+.||... ..+ .|++.. |+.. ..+.+... .+ ....+|++|+. .+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~-D~G~--tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 129 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSD-DGGG--NWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPG 129 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEES-STTS--CCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTT
T ss_pred CCceEEEEECCCCCCeEEEEe-cCCCCCccEEEeC-CCCC--CceECCccccCCCcccccccccccceeEEEeCCCCCCC
Confidence 35678999998 345677654 233 577653 4332 22322211 01 12346888874 57
Q ss_pred eEEEEeCCCCeEEEEECCCCceEEEEec------------------CCCCceeEEEeCC-CCeEEEEeeCCCCeEEEEec
Q psy13629 188 KLYWTDSETNKLEVSSLDGKKRKVLYWE------------------DIDQPRAIALVPQ-DSIMFWTDWGEVPKIERGAM 248 (395)
Q Consensus 188 ~LYwtd~~~~~I~v~~ldg~~~~~l~~~------------------~~~~P~~iavdp~-~g~LYwtd~~~~~~I~~~~~ 248 (395)
.||.... .+.|++.+-.|..-+.+... .......|++||. .+.||+.... ..|++..-
T Consensus 130 ~l~~g~~-~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~--ggl~~s~D 206 (394)
T 3b7f_A 130 TWYAGTS-PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS--GGVFESTD 206 (394)
T ss_dssp CEEEEEE-TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET--BEEEEESS
T ss_pred EEEEEec-CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC--CCEEEECC
Confidence 8887542 46788887666654433210 0112358999985 5678887522 34777655
Q ss_pred CCCCcceEEEEec--C--C--------cCceeEEEeccc-cEEEEeccceeeeeeec
Q psy13629 249 NGDPRHRKVIVDS--T--I--------FWPNGIAIDFNN-RLLYWIDGRLTFIEVMD 292 (395)
Q Consensus 249 dG~~~~~~~lv~~--~--~--------~~P~glalD~~~-~rLYwaD~~~~~I~~~~ 292 (395)
.| ..=+.+... . + .....|++|..+ ++||.... ..|.+.+
T Consensus 207 gG--~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--~gl~~s~ 259 (394)
T 3b7f_A 207 AG--TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--CGIYRMD 259 (394)
T ss_dssp TT--SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET--TEEEEEE
T ss_pred CC--CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC--CeEEEeC
Confidence 45 222222110 0 0 125678888643 67777642 3354443
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=52.91 E-value=1.2e+02 Score=28.21 Aligned_cols=141 Identities=14% Similarity=0.001 Sum_probs=77.6
Q ss_pred CeEEEEEEcC--CCEEEEEECCCCeEEEEEccCCCCCceEEEEeC------------------CCCCcceEEEecC-CCe
Q psy13629 130 EGAAIDYYYK--KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN------------------GLITPDGLAIDWL-TEK 188 (395)
Q Consensus 130 ~~~gl~~d~~--~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~------------------~~~~p~glAVD~~-~~~ 188 (395)
.+.+|++++. .+.||... ..+.|++..-.|. ..+.+... .......|++|+. .+.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~-~~ggl~~S~DgG~---tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~ 191 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGT-SPQGLFRSTDHGA---SWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKH 191 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEE-ETTEEEEESSTTS---BCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTC
T ss_pred ceeEEEeCCCCCCCEEEEEe-cCCcEEEEcCCCC---CeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCE
Confidence 4567888874 56777754 3566777654443 22332110 0112357899974 467
Q ss_pred EEEEeCCCCeEEEEECCCCceEEEEecC------------CCCceeEEEeCCC-CeEEEEeeCCCCeEEEEecCCCCcce
Q psy13629 189 LYWTDSETNKLEVSSLDGKKRKVLYWED------------IDQPRAIALVPQD-SIMFWTDWGEVPKIERGAMNGDPRHR 255 (395)
Q Consensus 189 LYwtd~~~~~I~v~~ldg~~~~~l~~~~------------~~~P~~iavdp~~-g~LYwtd~~~~~~I~~~~~dG~~~~~ 255 (395)
||+.... +.|++.+-.|+.-+.+.... ......|+++|.+ +.||+.. ...|++..-.| ..=
T Consensus 192 l~vg~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~---~~gl~~s~D~G--~tW 265 (394)
T 3b7f_A 192 LYIGMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN---HCGIYRMDRRE--GVW 265 (394)
T ss_dssp EEEEEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE---TTEEEEEETTT--TEE
T ss_pred EEEEECC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc---CCeEEEeCCCC--Ccc
Confidence 8877532 45777766665544432110 1236789999863 7888865 34588776545 221
Q ss_pred EEEEecCCc-----CceeEEEec-cccEEEEe
Q psy13629 256 KVIVDSTIF-----WPNGIAIDF-NNRLLYWI 281 (395)
Q Consensus 256 ~~lv~~~~~-----~P~glalD~-~~~rLYwa 281 (395)
+ .+...+. ....|++|+ ..+.||.+
T Consensus 266 ~-~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 266 K-RIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp E-CGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred e-ECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 1 1122121 123466765 34677775
No 354
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=52.82 E-value=2.2e+02 Score=29.59 Aligned_cols=150 Identities=10% Similarity=0.010 Sum_probs=82.2
Q ss_pred CCCCeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC-----------CCCCcceEEEecC-CCeEEEEeC
Q psy13629 127 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-----------GLITPDGLAIDWL-TEKLYWTDS 194 (395)
Q Consensus 127 ~~~~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~-----------~~~~p~glAVD~~-~~~LYwtd~ 194 (395)
..+++.+|++++.+..++|.....+.|+|..=.|. ..+.+... .......|++|+. .+.+|....
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~---tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g 95 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKW---EWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQG 95 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTT---EEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEEC
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCC---CeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEec
Confidence 45688999999987444444445567877665553 33433321 2234678999985 467887653
Q ss_pred C------CCeEEEEECCCCceEEEEecC-C-----CCc--eeEEEeCCC-CeEEEEeeCCCCeEEEEecCCCCcceEEEE
Q psy13629 195 E------TNKLEVSSLDGKKRKVLYWED-I-----DQP--RAIALVPQD-SIMFWTDWGEVPKIERGAMNGDPRHRKVIV 259 (395)
Q Consensus 195 ~------~~~I~v~~ldg~~~~~l~~~~-~-----~~P--~~iavdp~~-g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv 259 (395)
. ...|++..=.|+.-+.+.... . ... ..|+++|.+ +.+|... ....|++..=.| ..=+.+.
T Consensus 96 ~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~--~~~~l~~S~DgG--~TW~~~~ 171 (763)
T 3a0f_A 96 DYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS--RTQGLWRSTDRA--QTWSRMN 171 (763)
T ss_dssp SCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC--SSSCEEEESSTT--SSCEECT
T ss_pred ccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe--CCCcEEEECCCC--cCccccc
Confidence 2 467777766666544443211 0 111 369999874 6777654 234577654434 2211111
Q ss_pred ec--C---CcCceeEEEecc-ccEEEEecc
Q psy13629 260 DS--T---IFWPNGIAIDFN-NRLLYWIDG 283 (395)
Q Consensus 260 ~~--~---~~~P~glalD~~-~~rLYwaD~ 283 (395)
.. . ......|++|+. .++||++-.
T Consensus 172 ~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 201 (763)
T 3a0f_A 172 QLPDSSTYGIGIISVIFDPKNVGTAYVASH 201 (763)
T ss_dssp TSCCCSCTTTCEEEEEECSSSTTCEEEEES
T ss_pred cCcccCCCccceEEEEECCCCCCEEEEEEe
Confidence 10 0 011335667754 356777654
No 355
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=52.45 E-value=1.6e+02 Score=27.85 Aligned_cols=124 Identities=12% Similarity=-0.122 Sum_probs=63.2
Q ss_pred EEEEeeCCCCCccEEecCC---CCCeEEEEEEcCCCEEE-----------EEECCCCeEEEEEccCCCCCceEEEEeC--
Q psy13629 109 DIRIANLSRPLKPVTIIKD---LEEGAAIDYYYKKSMVC-----------WTDHGTEMISCCTFDGNNVGSKHNVITN-- 172 (395)
Q Consensus 109 ~I~~~~l~~~~~~~~~~~~---~~~~~gl~~d~~~~~ly-----------wsd~~~~~I~~~~~dg~~~~~~~~i~~~-- 172 (395)
.|++.|+........+... ......++|++.+..+. .+...+++|...+.+... ...+....
T Consensus 204 TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk--~l~v~~~~~p 281 (356)
T 2w18_A 204 NIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL--SVGVMLYCLP 281 (356)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE--EEEEEEECCC
T ss_pred cEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE--EEEEEEeecc
Confidence 7888888763333333221 23456778998765442 223344567667766541 11111110
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCce-eEEEeCCCCeEEEE
Q psy13629 173 GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPR-AIALVPQDSIMFWT 235 (395)
Q Consensus 173 ~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~-~iavdp~~g~LYwt 235 (395)
....-.-+..+.. +.+-.+-..+++|.+-|+....+...+......+. .++++|+..+|+-.
T Consensus 282 ~Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 282 PGQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp TTCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE
T ss_pred CCCcceeEccccC-CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE
Confidence 0001111222221 33344545578899999988776655533334445 48999987777644
No 356
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=51.71 E-value=1.9e+02 Score=28.73 Aligned_cols=16 Identities=19% Similarity=-0.097 Sum_probs=13.7
Q ss_pred ceEEEecCCCeEEEEe
Q psy13629 178 DGLAIDWLTEKLYWTD 193 (395)
Q Consensus 178 ~glAVD~~~~~LYwtd 193 (395)
.++|+|+.++.+|+..
T Consensus 389 ~~~a~dp~~g~~yv~~ 404 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGL 404 (571)
T ss_dssp CBCEEETTTTEEEEEE
T ss_pred CCceECCCCCEEEEEc
Confidence 5689999999999875
No 357
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=49.46 E-value=2.2e+02 Score=28.74 Aligned_cols=98 Identities=19% Similarity=0.302 Sum_probs=63.1
Q ss_pred eEEEecCCCeE--EEE-eC-----------CCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEE
Q psy13629 179 GLAIDWLTEKL--YWT-DS-----------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIE 244 (395)
Q Consensus 179 glAVD~~~~~L--Ywt-d~-----------~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~ 244 (395)
=.|.|+.+++| -|. |. .++.+.++|+||..+..++.. +.++|.....||-+..+....+.
T Consensus 294 v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~G------s~~iD~dG~~L~st~~gHGDa~h 367 (591)
T 2zux_A 294 LVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFG------SMAVDHDGKGMYSTGLGHGDALH 367 (591)
T ss_dssp EEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEET------TEEECTTSCEEEECSCCCCSCEE
T ss_pred EEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEe------eeEECCCCCEeeeCCCCCCCeeE
Confidence 35778878865 453 32 247899999999988877743 35788655555555455667789
Q ss_pred EEecCCCCcceEEEEe-cCCcCceeEE-EeccccEEEEec
Q psy13629 245 RGAMNGDPRHRKVIVD-STIFWPNGIA-IDFNNRLLYWID 282 (395)
Q Consensus 245 ~~~~dG~~~~~~~lv~-~~~~~P~gla-lD~~~~rLYwaD 282 (395)
..++|......+++.- +.-..|.|.+ .|...+.++|.-
T Consensus 368 v~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~ 407 (591)
T 2zux_A 368 TGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGV 407 (591)
T ss_dssp EECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred EeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEc
Confidence 9999874334455443 3223455665 466667777764
No 358
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=46.97 E-value=2.7e+02 Score=29.00 Aligned_cols=147 Identities=10% Similarity=0.016 Sum_probs=81.6
Q ss_pred CCCeEEEEEEcCC-CEEEEEECCCCeEEEEEccCCCCCceEEEEeCC------CCCcceEEEecCC-CeEEEEeCC-C--
Q psy13629 128 LEEGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG------LITPDGLAIDWLT-EKLYWTDSE-T-- 196 (395)
Q Consensus 128 ~~~~~gl~~d~~~-~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~------~~~p~glAVD~~~-~~LYwtd~~-~-- 196 (395)
..++.+|++++.+ +.+|... ..+.|+|..=.|. ..+.+.... .....+|++|+.+ +.+|..-.. .
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~-~~ggv~rS~DgG~---tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYART-DIGGAYRWDAGTS---KWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD 89 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEE-SSSCEEEEETTTT---EEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred CCcEEEEEECCCCCCEEEEEe-cCCCEEEecCCCC---CeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCC
Confidence 3578899999875 4555543 5567887765554 344432211 2357789999854 567776543 2
Q ss_pred --CeEEEEECCCCceEEEEecCCC---------CceeEEEeCCC-CeEEEEeeCCCCeEEEEecCCCCcceEEEEec---
Q psy13629 197 --NKLEVSSLDGKKRKVLYWEDID---------QPRAIALVPQD-SIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS--- 261 (395)
Q Consensus 197 --~~I~v~~ldg~~~~~l~~~~~~---------~P~~iavdp~~-g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~--- 261 (395)
..|++..=.|+.-+.+.. ... ....|+++|.+ +.+|... ....|++..=.| ..=+.+...
T Consensus 90 ~~~~v~~S~DgG~TW~~~~~-~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~--~~~gl~~S~DgG--~TW~~~~~~~~~ 164 (789)
T 1sqj_A 90 EWAAFYVSEDRGQSFTIYES-PFPMGANDMGRNNGERLAVNPFNSNEVWMGT--RTEGIWKSSDRA--KTWTNVTSIPDA 164 (789)
T ss_dssp SCCEEEEESSTTSEEEEEEC-SSCCCTTSTTTTSCCCEEEETTEEEEEEEEC--SSSCEEEESSTT--SSCEEETTSCCC
T ss_pred cccEEEEECCCCCcceeccC-CcccCccCCCccceeEEEEcCCCCCEEEEEe--ccCCEEEECCCC--cccCCCccCccc
Confidence 678777666665554432 111 23579999875 4566543 234576655444 222222110
Q ss_pred --CCcCceeEEEecc-ccEEEEecc
Q psy13629 262 --TIFWPNGIAIDFN-NRLLYWIDG 283 (395)
Q Consensus 262 --~~~~P~glalD~~-~~rLYwaD~ 283 (395)
.-.....|++|+. .+.||.+-.
T Consensus 165 ~~~~~~~~~i~~~p~~~~~~~~~~~ 189 (789)
T 1sqj_A 165 FTNGIGYTSVIFDPERNGTIYASAT 189 (789)
T ss_dssp CSTTTCEEEEEECTTSTTCEEEEES
T ss_pred cCCCCCeEEEEECCCCCCEEEEEEc
Confidence 0012345667753 357777654
No 359
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=43.85 E-value=2.8e+02 Score=28.30 Aligned_cols=148 Identities=7% Similarity=-0.063 Sum_probs=80.8
Q ss_pred CeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeCCC---CCcceEEEecCCCeEEEEeCCCCeEEEEECCC
Q psy13629 130 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL---ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 206 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~~~---~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg 206 (395)
.+.+|..|..+ .|+......+-|.+++.+.. ....+....+ ..+.++..|. .++|++... +-+.+++++.
T Consensus 473 ~i~~i~~d~~g-~lWi~~~t~~Gl~~~d~~~~---~~~~~~~~~~~~~~~~~~i~~d~-~g~lWigt~--~Gl~~~~~~~ 545 (758)
T 3ott_A 473 FINQIIPDNEG-NVWVLLYNNKGIDKINPRTR---EVTKLFADELTGEKSPNYLLCDE-DGLLWVGFH--GGVMRINPKD 545 (758)
T ss_dssp CEEEEEECTTS-CEEEEETTCSSEEEEETTTT---EEEEECTTTSCGGGCEEEEEECT-TSCEEEEET--TEEEEECC--
T ss_pred eeeeEEEcCCC-CEEEEccCCCCcEEEeCCCC---ceEEecCCCcCCCcccceEEECC-CCCEEEEec--CceEEEecCC
Confidence 36778777654 45543334466888887653 2232222222 3567888885 778877763 4688888765
Q ss_pred CceEEEEecC--CCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEecCCcCceeEEEeccccEEEEeccc
Q psy13629 207 KKRKVLYWED--IDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGR 284 (395)
Q Consensus 207 ~~~~~l~~~~--~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD~~ 284 (395)
...+..-... ...+.+|+.+ .|.|+++. ..-|.+.+... ...+..-.... .-++..++..+++||+.-.
T Consensus 546 ~~~~~~~~~gl~~~~i~~i~~~--~g~lWi~t---~~Gl~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~G~l~fG~~- 616 (758)
T 3ott_A 546 ESQQSISFGSFSNNEILSMTCV--KNSIWVST---TNGLWIIDRKT--MDARQQNMTNK-RFTSLLFDPKEDCVYLGGA- 616 (758)
T ss_dssp CCCCBCCCCC---CCEEEEEEE--TTEEEEEE---SSCEEEEETTT--CCEEEC--CCC-CCSEEEEETTTTEEEEECB-
T ss_pred CceEEecccCCCccceEEEEEC--CCCEEEEC---CCCeEEEcCCC--ceeEEecCCCC-ceeeeEEECCCCcEEEecC-
Confidence 5433221112 2446777654 78998877 34488888765 22221111111 1234555556788988863
Q ss_pred eeeeeeeccc
Q psy13629 285 LTFIEVMDYD 294 (395)
Q Consensus 285 ~~~I~~~~~d 294 (395)
+-+..++++
T Consensus 617 -~Gl~~f~p~ 625 (758)
T 3ott_A 617 -DGFGISHSN 625 (758)
T ss_dssp -SEEEEEEC-
T ss_pred -CceEEEChh
Confidence 334455544
No 360
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=40.55 E-value=3e+02 Score=27.69 Aligned_cols=30 Identities=10% Similarity=0.011 Sum_probs=21.7
Q ss_pred EEEEEEcCCCEEEEEECCC---------------CeEEEEEccCC
Q psy13629 132 AAIDYYYKKSMVCWTDHGT---------------EMISCCTFDGN 161 (395)
Q Consensus 132 ~gl~~d~~~~~lywsd~~~---------------~~I~~~~~dg~ 161 (395)
..+++|...+.||+..... +.|+..+.+..
T Consensus 244 ~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG 288 (599)
T 1w6s_A 244 GWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTG 288 (599)
T ss_dssp SCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTC
T ss_pred cceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCC
Confidence 3578999999999976432 46777777644
No 361
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=39.51 E-value=2.2e+02 Score=25.80 Aligned_cols=98 Identities=7% Similarity=0.009 Sum_probs=57.8
Q ss_pred CCeEEEEeCCCCeEEEEECCCCceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCCCcceEEEEe-cCCc
Q psy13629 186 TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVD-STIF 264 (395)
Q Consensus 186 ~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~-~~~~ 264 (395)
++.+|+.. ..+.+..+++......-. .....+.+++++ ++.||+... ...|...+... .....-.. ....
T Consensus 239 ~~~v~~~~-~~g~l~~~d~~tG~~~w~--~~~~~~~~~~~~--~~~l~~~~~--~g~l~~~d~~t--G~~~w~~~~~~~~ 309 (376)
T 3q7m_A 239 NGVVFALA-YNGNLTALDLRSGQIMWK--RELGSVNDFIVD--GNRIYLVDQ--NDRVMALTIDG--GVTLWTQSDLLHR 309 (376)
T ss_dssp TTEEEEEC-TTSCEEEEETTTCCEEEE--ECCCCEEEEEEE--TTEEEEEET--TCCEEEEETTT--CCEEEEECTTTTS
T ss_pred CCEEEEEe-cCcEEEEEECCCCcEEee--ccCCCCCCceEE--CCEEEEEcC--CCeEEEEECCC--CcEEEeecccCCC
Confidence 57888776 356888899854433221 234456677776 789999873 45688888754 22222222 1111
Q ss_pred CceeEEEeccccEEEEeccceeeeeeecccc
Q psy13629 265 WPNGIAIDFNNRLLYWIDGRLTFIEVMDYDG 295 (395)
Q Consensus 265 ~P~glalD~~~~rLYwaD~~~~~I~~~~~dG 295 (395)
.....+++ +++||+.+. .+.+..++...
T Consensus 310 ~~~~~~~~--~~~l~v~~~-~g~l~~~d~~t 337 (376)
T 3q7m_A 310 LLTSPVLY--NGNLVVGDS-EGYLHWINVED 337 (376)
T ss_dssp CCCCCEEE--TTEEEEECT-TSEEEEEETTT
T ss_pred cccCCEEE--CCEEEEEeC-CCeEEEEECCC
Confidence 22333444 688998875 35677777543
No 362
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=37.69 E-value=3.7e+02 Score=27.93 Aligned_cols=147 Identities=10% Similarity=0.051 Sum_probs=79.2
Q ss_pred CCeEEEEEEcCC-CEEEEEECC-C----CeEEEEEccCCCCCceEEEEeC-CC-------CCcceEEEecCCCeEEEEeC
Q psy13629 129 EEGAAIDYYYKK-SMVCWTDHG-T----EMISCCTFDGNNVGSKHNVITN-GL-------ITPDGLAIDWLTEKLYWTDS 194 (395)
Q Consensus 129 ~~~~gl~~d~~~-~~lywsd~~-~----~~I~~~~~dg~~~~~~~~i~~~-~~-------~~p~glAVD~~~~~LYwtd~ 194 (395)
....+|++|+.. +.+|..-.. . ..|++. .|+.. ..+.+... .. .....|++|+.+....|.-.
T Consensus 64 ~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S-~DgG~--TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~ 140 (789)
T 1sqj_A 64 MGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVS-EDRGQ--SFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT 140 (789)
T ss_dssp CSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEE-SSTTS--EEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC
T ss_pred CceeEEEECCCCCCEEEEEeCccCCCcccEEEEE-CCCCC--cceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe
Confidence 358899999854 567776432 2 566655 44432 34444321 00 12357999987544434443
Q ss_pred CCCeEEEEECCCCceEEEEec-----CCCCceeEEEeCCC-CeEEEEeeCCCCeEEEEecCCCCcceEEEEec--C----
Q psy13629 195 ETNKLEVSSLDGKKRKVLYWE-----DIDQPRAIALVPQD-SIMFWTDWGEVPKIERGAMNGDPRHRKVIVDS--T---- 262 (395)
Q Consensus 195 ~~~~I~v~~ldg~~~~~l~~~-----~~~~P~~iavdp~~-g~LYwtd~~~~~~I~~~~~dG~~~~~~~lv~~--~---- 262 (395)
..+.|++..=.|+.-+.+... .......|+++|.+ +.||...+. ...|++..=.| ..=+.+... .
T Consensus 141 ~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~v~~S~DgG--~TW~~~~~~~~~~~~~ 217 (789)
T 1sqj_A 141 RTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA-PQGMYVTHDGG--VSWEPVAGQPSSWLNR 217 (789)
T ss_dssp SSSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS-TTCEEEESSTT--SSCEECTTCCCSCCHH
T ss_pred ccCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC-CCeEEEEcCCC--cCcccCCCCcCccccc
Confidence 346677766556554443210 01234578888865 478887632 25576654333 221111111 0
Q ss_pred -----------CcCceeEEEeccccEEEEe
Q psy13629 263 -----------IFWPNGIAIDFNNRLLYWI 281 (395)
Q Consensus 263 -----------~~~P~glalD~~~~rLYwa 281 (395)
...|+.|+++...++||.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~ 247 (789)
T 1sqj_A 218 TTGAFPDKKPASIAPQPMKVALTPNFLYVT 247 (789)
T ss_dssp HHHTSTTCCCSSSSCEEEEEEECSSEEEEE
T ss_pred cccccCcccccccccceeEEcCCCCeEEEE
Confidence 0123788888767788877
No 363
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=34.81 E-value=2.5e+02 Score=25.22 Aligned_cols=139 Identities=11% Similarity=-0.022 Sum_probs=74.7
Q ss_pred CeEEEEEEcCCCEEEEEECCCCeEEEEEccCCCCCceEEEEeC-C-CCCcceEEEecCCCeEEEEeCCCCeEEEEECCCC
Q psy13629 130 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-G-LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 207 (395)
Q Consensus 130 ~~~gl~~d~~~~~lywsd~~~~~I~~~~~dg~~~~~~~~i~~~-~-~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~ 207 (395)
...+|++++ +.+|... ..+.|++ ..||.. ..+.+... . ...+.+|+... .+.+|.+.. .+.|++..=.|.
T Consensus 81 ~~~~i~~~~--~~~~~~g-~~g~i~~-S~DgG~--tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~-~g~v~~S~DgG~ 152 (327)
T 2xbg_A 81 RFNSVSFQG--NEGWIVG-EPPIMLH-TTDGGQ--SWSQIPLDPKLPGSPRLIKALG-NGSAEMITN-VGAIYRTKDSGK 152 (327)
T ss_dssp EEEEEEEET--TEEEEEE-ETTEEEE-ESSTTS--SCEECCCCTTCSSCEEEEEEEE-TTEEEEEET-TCCEEEESSTTS
T ss_pred cEEEEEecC--CeEEEEE-CCCeEEE-ECCCCC--CceECccccCCCCCeEEEEEEC-CCCEEEEeC-CccEEEEcCCCC
Confidence 567888885 5677664 4567776 566543 33333221 1 13456677653 467777664 456777654465
Q ss_pred ceEEEEecCCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecC-CCCcceEEEEecCCcCceeEEEeccccEEEEec
Q psy13629 208 KRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMN-GDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWID 282 (395)
Q Consensus 208 ~~~~l~~~~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~d-G~~~~~~~lv~~~~~~P~glalD~~~~rLYwaD 282 (395)
.-..+.........++++++.+ .+|... ....+++..-+ | ..=+.+-...-.....++++. ++++|.+-
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~-~~~~~g--~~G~~~~S~d~gG--~tW~~~~~~~~~~~~~~~~~~-~g~~~~~~ 222 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSG-EYVAVS--SRGSFYSTWEPGQ--TAWEPHNRTTSRRLHNMGFTP-DGRLWMIV 222 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTS-CEEEEE--TTSSEEEEECTTC--SSCEEEECCSSSCEEEEEECT-TSCEEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCC-cEEEEE--CCCcEEEEeCCCC--CceeECCCCCCCccceeEECC-CCCEEEEe
Confidence 5554443333456788888854 444332 24567776544 3 222222222222445677764 34566543
No 364
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=34.21 E-value=1e+02 Score=31.31 Aligned_cols=74 Identities=12% Similarity=0.002 Sum_probs=56.5
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCeEEEEECCC----------CceEEEEe--cCCCCceeEEEeCCCCeEEEEeeCCCC
Q psy13629 174 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG----------KKRKVLYW--EDIDQPRAIALVPQDSIMFWTDWGEVP 241 (395)
Q Consensus 174 ~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg----------~~~~~l~~--~~~~~P~~iavdp~~g~LYwtd~~~~~ 241 (395)
..+|.|+-+++.++.+|.+.....++.|++.+. ..+.+++. +..--|.-.++|+ +|..|-|-.- ..
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlfi-dS 399 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLFI-DS 399 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEETT-TT
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeeee-cc
Confidence 478999999999999999999999999999763 22223332 3466799999998 5699988743 45
Q ss_pred eEEEEecC
Q psy13629 242 KIERGAMN 249 (395)
Q Consensus 242 ~I~~~~~d 249 (395)
.|.+.+++
T Consensus 400 qvvkWni~ 407 (638)
T 3sbq_A 400 QVVKWNME 407 (638)
T ss_dssp EEEEEEHH
T ss_pred eEEEEecc
Confidence 67777765
No 365
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=34.17 E-value=4e+02 Score=27.31 Aligned_cols=105 Identities=17% Similarity=0.090 Sum_probs=62.1
Q ss_pred CcceEEEecCC-CeEEEEeCCCCeEEEEECCCCceEEEEecC------CCCceeEEEeCC-CCeEEEEee------CC-C
Q psy13629 176 TPDGLAIDWLT-EKLYWTDSETNKLEVSSLDGKKRKVLYWED------IDQPRAIALVPQ-DSIMFWTDW------GE-V 240 (395)
Q Consensus 176 ~p~glAVD~~~-~~LYwtd~~~~~I~v~~ldg~~~~~l~~~~------~~~P~~iavdp~-~g~LYwtd~------~~-~ 240 (395)
...+|++++.+ +.||. -...+.|++.+-.|+.-+.+.... .....+|++||. .+.||++.- +. .
T Consensus 24 ~i~~i~~~p~~~~~~~~-~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYA-RAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEE-ECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEE-EecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 78899999876 45555 434567999887776655543211 134678999994 578988751 11 3
Q ss_pred CeEEEEecCCCCcceEEEEecCCc-------CceeEEEeccc-cEEEEec
Q psy13629 241 PKIERGAMNGDPRHRKVIVDSTIF-------WPNGIAIDFNN-RLLYWID 282 (395)
Q Consensus 241 ~~I~~~~~dG~~~~~~~lv~~~~~-------~P~glalD~~~-~rLYwaD 282 (395)
..|++..=.|. +=.++....... ....|++|+.+ ++||...
T Consensus 103 ~~l~~S~DgG~-TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGE-TWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSS-SCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCC-CcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 46777654451 222222111100 12579999754 6777765
No 366
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=30.22 E-value=2.6e+02 Score=28.91 Aligned_cols=109 Identities=10% Similarity=0.030 Sum_probs=61.4
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCeEEEEECCCCceEEEEec-----------CCCCceeEEEeCC-CCeEEEEeeC--
Q psy13629 173 GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-----------DIDQPRAIALVPQ-DSIMFWTDWG-- 238 (395)
Q Consensus 173 ~~~~p~glAVD~~~~~LYwtd~~~~~I~v~~ldg~~~~~l~~~-----------~~~~P~~iavdp~-~g~LYwtd~~-- 238 (395)
......+|++|+.+..++|+-...+.|.+..=.|+.-+.+... ......+|++||. .+.||...+.
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 3456788999987754444444456688887666655544321 2234688999995 5788887642
Q ss_pred ---CCCeEEEEecCCCCcceEEEEecCC-----cCc--eeEEEecc-ccEEEEec
Q psy13629 239 ---EVPKIERGAMNGDPRHRKVIVDSTI-----FWP--NGIAIDFN-NRLLYWID 282 (395)
Q Consensus 239 ---~~~~I~~~~~dG~~~~~~~lv~~~~-----~~P--~glalD~~-~~rLYwaD 282 (395)
....|++..=.|. +=.++...... ... ..|++++. .+++|.+-
T Consensus 99 ~~~~~~~i~~S~DgG~-TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~ 152 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRGK-TFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS 152 (763)
T ss_dssp TTCSCCEEEEESSTTS-SCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC
T ss_pred cCCCCceEEEECCCCC-CceeccCCcccCccccCccccceEEECCCCCCEEEEEe
Confidence 2356777664451 22222211110 011 35888864 35676654
No 367
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=27.00 E-value=5.1e+02 Score=26.27 Aligned_cols=18 Identities=11% Similarity=-0.036 Sum_probs=14.4
Q ss_pred CcceEEEecCCCeEEEEe
Q psy13629 176 TPDGLAIDWLTEKLYWTD 193 (395)
Q Consensus 176 ~p~glAVD~~~~~LYwtd 193 (395)
.-.++|+|+.++.+|+..
T Consensus 390 ~w~~~a~dp~~~~~yv~~ 407 (689)
T 1yiq_A 390 DWQPMSYNPDTGLVYIPA 407 (689)
T ss_dssp CSSCCEEETTTTEEEEEE
T ss_pred CCCcceECCCCCEEEEec
Confidence 345699999999999863
No 368
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=23.84 E-value=5.7e+02 Score=25.76 Aligned_cols=180 Identities=17% Similarity=0.192 Sum_probs=98.0
Q ss_pred eEEEEEeeCCCCCccEEecCCC-------------CCeEEEEEEcCCCEEEEEECCC--------CeEEEEEccCCCCCc
Q psy13629 107 LLDIRIANLSRPLKPVTIIKDL-------------EEGAAIDYYYKKSMVCWTDHGT--------EMISCCTFDGNNVGS 165 (395)
Q Consensus 107 ~~~I~~~~l~~~~~~~~~~~~~-------------~~~~gl~~d~~~~~lywsd~~~--------~~I~~~~~dg~~~~~ 165 (395)
..++.+.|++|..++.+++... +...=.+|+..+..|+..+... ..+..+++||.. .
T Consensus 114 ~nd~sVgDLDGDG~~EiVv~~dp~n~~d~s~~g~tg~~~l~aY~ldG~~LW~idlg~ni~aGa~yt~~~V~DlDGDG--k 191 (591)
T 2zux_A 114 ANDASVGDVDGDGQYELILKWDPSNSKDNSQDGYTGDVLIDAYKLDGTKLWRINLGKNIRAGAHYTQFMVYDLDGDG--K 191 (591)
T ss_dssp EEEEEEECSSSSSSCEEEEEEEETTCCCTTCCSCCCCCEEEEECTTSCEEEEEECCTTSCCSTTSCCCEEECSSSSS--S
T ss_pred cCCCeEEecCCCCCEEEEEEECCcccccccccCcCCCcEEEEEECCCCEEEEEcCCCCcccccccCceeEEEcCCCC--c
Confidence 3688889999866655443321 0123346888777776666432 247788888764 3
Q ss_pred eEEEEeCC-------------------------CCCcceEE-EecCCCeEEEEeCC---CC----------------eEE
Q psy13629 166 KHNVITNG-------------------------LITPDGLA-IDWLTEKLYWTDSE---TN----------------KLE 200 (395)
Q Consensus 166 ~~~i~~~~-------------------------~~~p~glA-VD~~~~~LYwtd~~---~~----------------~I~ 200 (395)
.+.++... +..|+=|. +|-.+|+..++-.. .+ .+.
T Consensus 192 aEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~ 271 (591)
T 2zux_A 192 AEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAG 271 (591)
T ss_dssp CEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEE
T ss_pred ceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEecccCCCCCCcccccccccccccccceee
Confidence 35444421 12344444 35556666665311 11 467
Q ss_pred EEECCCCceEEEEecCC-CCceeEEEeCCCCeE--EEEeeC-----------CCCeEEEEecCCCCcceEEEEecCCcCc
Q psy13629 201 VSSLDGKKRKVLYWEDI-DQPRAIALVPQDSIM--FWTDWG-----------EVPKIERGAMNGDPRHRKVIVDSTIFWP 266 (395)
Q Consensus 201 v~~ldg~~~~~l~~~~~-~~P~~iavdp~~g~L--Ywtd~~-----------~~~~I~~~~~dG~~~~~~~lv~~~~~~P 266 (395)
+++|||.....++..+. .+-.=.|.|-.++.| -|.--. .++.+..+++||. ...++++..
T Consensus 272 vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgD-G~dEIv~Gs----- 345 (591)
T 2zux_A 272 IAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGD-GKDEIIFGS----- 345 (591)
T ss_dssp EECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSS-SSCEEEETT-----
T ss_pred EEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCC-CCceEEEee-----
Confidence 88999987666664432 222234566556654 453211 1357888888883 233344332
Q ss_pred eeEEEeccccEEEEec-cceeeeeeeccccc
Q psy13629 267 NGIAIDFNNRLLYWID-GRLTFIEVMDYDGY 296 (395)
Q Consensus 267 ~glalD~~~~rLYwaD-~~~~~I~~~~~dG~ 296 (395)
+++|.++.-||-+. .....+.+.++|..
T Consensus 346 --~~iD~dG~~L~st~~gHGDa~hv~dldP~ 374 (591)
T 2zux_A 346 --MAVDHDGKGMYSTGLGHGDALHTGDLDPG 374 (591)
T ss_dssp --EEECTTSCEEEECSCCCCSCEEEECCCTT
T ss_pred --eEECCCCCEeeeCCCCCCCeeEEeecCCC
Confidence 57885555555443 22244555555543
No 369
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=23.28 E-value=5.5e+02 Score=25.41 Aligned_cols=18 Identities=0% Similarity=-0.092 Sum_probs=14.5
Q ss_pred eEEEEEEcCCCEEEEEEC
Q psy13629 131 GAAIDYYYKKSMVCWTDH 148 (395)
Q Consensus 131 ~~gl~~d~~~~~lywsd~ 148 (395)
+..+++|+..+.||+...
T Consensus 248 w~~~a~d~~~g~vyv~~g 265 (582)
T 1flg_A 248 WQSASFDAETNTIIVGAG 265 (582)
T ss_dssp CSCCEEETTTTEEEEEEC
T ss_pred cCCceEcCCCCEEEEeCC
Confidence 456789999999998763
No 370
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=22.27 E-value=4e+02 Score=25.02 Aligned_cols=64 Identities=6% Similarity=0.119 Sum_probs=43.1
Q ss_pred CeEEEEeCCCC--eEEEEECCCCceEEEEec------CCCCceeEEEeCCCCeEEEEeeCCCCeEEEEecCCC
Q psy13629 187 EKLYWTDSETN--KLEVSSLDGKKRKVLYWE------DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGD 251 (395)
Q Consensus 187 ~~LYwtd~~~~--~I~v~~ldg~~~~~l~~~------~~~~P~~iavdp~~g~LYwtd~~~~~~I~~~~~dG~ 251 (395)
..||.-+...+ .|..+||+.......+.= +...+.+-.--...+.+|++++. ..+|.+++.+|.
T Consensus 40 ~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~-~~~i~l~n~~G~ 111 (369)
T 3s9j_A 40 EYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNN-ISRLSSINSQGE 111 (369)
T ss_dssp EEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGG-GTEEEEECTTCC
T ss_pred EEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCC-cceEEEECCCce
Confidence 37788888888 999999998776533321 13334322222346678888755 678999999994
No 371
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=20.89 E-value=6.5e+02 Score=25.31 Aligned_cols=32 Identities=19% Similarity=0.099 Sum_probs=22.4
Q ss_pred eEEEecCCCeEEEEeCCC------------------CeEEEEECCCCceE
Q psy13629 179 GLAIDWLTEKLYWTDSET------------------NKLEVSSLDGKKRK 210 (395)
Q Consensus 179 glAVD~~~~~LYwtd~~~------------------~~I~v~~ldg~~~~ 210 (395)
.+++|+..+.+|+..... ..|...|++....+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~ 283 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLA 283 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCcee
Confidence 479999899999886421 25888887655443
Done!