RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13629
(395 letters)
>d1zkca1 b.62.1.1 (A:280-457) Peptidyl-prolyl cis-trans
isomerase-like 2, Cyclophilin-60, PPI domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 139 bits (350), Expect = 3e-40
Identities = 74/101 (73%), Positives = 89/101 (88%)
Query: 295 GYVRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTG 354
GYVRL T+ G +NLEL+C++ PKTCENF++ C+ YY+GT FHRSIRNF+IQGGDPTGTG
Sbjct: 1 GYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTG 60
Query: 355 TGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQL 395
TGGES WGKPF+DEF+PN +HTGRG+LSMANSGPN+N SQ
Sbjct: 61 TGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQF 101
>d1xwna1 b.62.1.1 (A:1-166) Peptidyl-prolyl cis-trans isomerase-like
1, PPIL1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 166
Score = 124 bits (313), Expect = 4e-35
Identities = 63/98 (64%), Positives = 74/98 (75%)
Query: 297 VRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTG 356
V L TS+G I LELY PKTC+NF + GYYNGTKFHR I++FMIQGGDPTGTG G
Sbjct: 14 VYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRG 73
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
G SI+GK FEDE P+ TG G+L+MAN+GP+TN SQ
Sbjct: 74 GASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQ 111
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 266
Score = 119 bits (299), Expect = 6e-32
Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 105 AYLL-----DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD 159
AYL ++R L R + ++I +L A+D + + W+D MI D
Sbjct: 2 AYLFFTNRHEVRKMTLDRS-EYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLD 60
Query: 160 GNNVGSKH-NVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDID 218
+ S + VI+ + PDGLA+DW+ +YWTDS + V+ G KRK L+ E+
Sbjct: 61 RAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS 120
Query: 219 QPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLL 278
+PRAI + P M+WTDWG KI++G +NG +V I WPNGI +D + L
Sbjct: 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRL 178
Query: 279 YWIDGRLTFIEVMDYDGYVRLV 300
YW+D +L I +D +G R
Sbjct: 179 YWVDSKLHSISSIDVNGGNRKT 200
Score = 60.3 bits (145), Expect = 5e-11
Identities = 31/162 (19%), Positives = 65/162 (40%), Gaps = 5/162 (3%)
Query: 110 IRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 169
+ +A+ + ++ + AI + WTD GT G N +++
Sbjct: 101 VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK--GGLNGVDIYSL 158
Query: 170 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQD 229
+T + P+G+ +D L+ +LYW DS+ + + ++G RK + ++ +L +
Sbjct: 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE 218
Query: 230 SIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAI 271
+FWTD I N ++ + P + +
Sbjct: 219 DKVFWTDIIN-EAIFS--ANRLTGSDVNLLAENLLSPEDMVL 257
Score = 60.3 bits (145), Expect = 5e-11
Identities = 35/172 (20%), Positives = 64/172 (37%), Gaps = 7/172 (4%)
Query: 122 VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLA 181
I +D++ + + S + WTD +S G + + P +
Sbjct: 70 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRENGSKPRAIV 126
Query: 182 IDWLTEKLYWTDSETN-KLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEV 240
+D + +YWTD T K++ L+G L E+I P I L ++W D
Sbjct: 127 VDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL- 185
Query: 241 PKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMD 292
I +NG R + + + P +A+ + ++W D I +
Sbjct: 186 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDK--VFWTDIINEAIFSAN 235
Score = 48.8 bits (115), Expect = 4e-07
Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 3/101 (2%)
Query: 126 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 185
++++ I + W D IS +G N ++ + ++
Sbjct: 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAVF 217
Query: 186 TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALV 226
+K++WTD + ++ L E++ P + L
Sbjct: 218 EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 258
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Length = 263
Score = 113 bits (282), Expect = 1e-29
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 18/215 (8%)
Query: 104 GAYLL-----DIRIANLSRP-----LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMI 153
G +LL I L R + + + + +V WTD I
Sbjct: 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSI 60
Query: 154 SCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLY 213
+ G +I L +P+G+A+D L ++WTDS+ +++EV+ +DG +R+VL+
Sbjct: 61 GRASLHGGEP---TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF 117
Query: 214 WEDIDQPRAIALVPQDSIMFWTDWG-EVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAID 272
+ PR I P ++WTDW + PKIE M+G +R+++ + PNG+ D
Sbjct: 118 DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT--NRRILAQDNLGLPNGLTFD 175
Query: 273 FNNRLLYWIDGRLTFIEVMDYDGYVR--LVTSLGH 305
+ L W+D E ++ R ++ L +
Sbjct: 176 AFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY 210
Score = 57.6 bits (138), Expect = 5e-10
Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 10/164 (6%)
Query: 110 IRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTE--MISCCTFDGNNVGSKH 167
I +A + + V L I + + WTD + I DG N
Sbjct: 103 IEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA 162
Query: 168 NVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVP 227
P+GL D + +L W D+ T++ E + R+ + E + P A+
Sbjct: 163 QDNLGL---PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL-EGLQYPFAVT-SY 217
Query: 228 QDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAI 271
++ ++TDW + + GI I
Sbjct: 218 GKNL-YYTDWKT-NSVIA-MDLAISKEMDTFHPHKQTRLYGITI 258
Score = 49.5 bits (117), Expect = 2e-07
Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 7/97 (7%)
Query: 133 AIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWT 192
+ + S +CW D GT C + GL P + + LY+T
Sbjct: 171 GLTFDAFSSQLCWVDAGTHRAECLNPAQPGR----RKVLEGLQYPFAVTSY--GKNLYYT 224
Query: 193 DSETNKLE-VSSLDGKKRKVLYWEDIDQPRAIALVPQ 228
D +TN + + K+ + + I +
Sbjct: 225 DWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261
Score = 49.5 bits (117), Expect = 2e-07
Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 3/158 (1%)
Query: 199 LEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVI 258
LE +++ + K +A D +++WTD E P I R + I
Sbjct: 17 LERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISE-PSIGR--ASLHGGEPTTI 73
Query: 259 VDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLVTSLGHINLELYCNVFPKT 318
+ + P GIA+D R ++W D +L IEV DG R V + P
Sbjct: 74 IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVR 133
Query: 319 CENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTG 356
+ H N I D G G
Sbjct: 134 GNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNG 171
Score = 27.1 bits (59), Expect = 3.6
Identities = 14/111 (12%), Positives = 30/111 (27%)
Query: 268 GIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLVTSLGHINLELYCNVFPKTCENFMKHCE 327
G+A D ++++YW D I G + + F +
Sbjct: 40 GLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ 99
Query: 328 NGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTGR 378
K + R + G G + + G + ++ +
Sbjct: 100 LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIET 150
>d2ok3a1 b.62.1.1 (A:1-159) Cyclophilin-like protein PPIL3B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 159
Score = 108 bits (271), Expect = 5e-29
Identities = 59/99 (59%), Positives = 71/99 (71%)
Query: 297 VRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTG 356
V L T +G I +E++C PKTCENF+ C + YYNG FHR+I+ FM+Q GDPTGTG G
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 62
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQL 395
G SIWGK FEDE+ H RGV+SMAN+GPNTN SQ
Sbjct: 63 GNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQF 101
>d2b71a1 b.62.1.1 (A:23-191) Cyclophilin-like protein PY00693
{Plasmodium yoelii [TaxId: 5861]}
Length = 169
Score = 99.5 bits (247), Expect = 1e-25
Identities = 59/100 (59%), Positives = 73/100 (73%)
Query: 295 GYVRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTG 354
GY+ + T+LG +ELY PKTC NF CE G+Y+ T FHR I NF+IQGGDPTGTG
Sbjct: 17 GYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTG 76
Query: 355 TGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
GG+SI+G+ FEDE HTG G+LSM+N+GPNTN+SQ
Sbjct: 77 KGGKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQ 116
>d2cfea1 b.62.1.1 (A:1-162) Cyclophilin-like allergen Mal s 6
{Malassezia sympodialis [TaxId: 76777]}
Length = 162
Score = 98.2 bits (244), Expect = 3e-25
Identities = 49/98 (50%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHCENG---YYNGTKFHRSIRNFMIQGGDPT-GTGTG 356
LG I +L+ +V PKT NF C Y G+ FHR I +FM+QGGD T G GTG
Sbjct: 13 APLGTIKFKLFDDVVPKTAANFRALCTGEKGFGYAGSHFHRVIPDFMLQGGDFTAGNGTG 72
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
G+SI+G F DE H G+LSMAN+GPNTN SQ
Sbjct: 73 GKSIYGAKFADEN-FQLKHNKPGLLSMANAGPNTNGSQ 109
>d1w74a_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 171
Score = 96.1 bits (238), Expect = 3e-24
Identities = 46/113 (40%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 297 VRLVTSLGHINLELYCNVFPKTCENFMKHCENG---------------YYNGTKFHRSIR 341
L T+ G I + L+ N PKT NF+ + +Y+G FHR I+
Sbjct: 6 ATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQ 65
Query: 342 NFMIQGGDPTGTGTGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
FMIQGGDPTGTG GG F DEF P +L+MAN+GP TN SQ
Sbjct: 66 GFMIQGGDPTGTGRGGPGYK---FADEFHPELQFDKPYLLAMANAGPGTNGSQ 115
>d1a33a_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Nematode (Brugia
malayi) [TaxId: 6279]}
Length = 174
Score = 93.3 bits (231), Expect = 4e-23
Identities = 51/107 (47%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHCEN-----------GYYNGTKFHRSIRNFMIQGGD 349
G I +ELY ++ P+TC NF+ C +Y G+ FHR I+NFMIQGGD
Sbjct: 15 NLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGD 74
Query: 350 PT-GTGTGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQL 395
T G GTGGESI+G F+DE H V+SMAN GPNTN SQ
Sbjct: 75 FTKGDGTGGESIYGGMFDDEE-FVMKHDEPFVVSMANKGPNTNGSQF 120
>d1qnga_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Plasmodium
falciparum [TaxId: 5833]}
Length = 170
Score = 91.8 bits (227), Expect = 1e-22
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 11/104 (10%)
Query: 301 TSLGHINLELYCNVFPKTCENF---------MKHCENGYYNGTKFHRSIRNFMIQGGDP- 350
++ G I EL+ ++ P+TCENF +N +Y + FHR I FM QGGD
Sbjct: 15 SNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDIT 74
Query: 351 TGTGTGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
G G+GGESI+G+ F DE N H G+LSMAN+GPNTN+SQ
Sbjct: 75 NGNGSGGESIYGRSFTDEN-FNMKHDQPGLLSMANAGPNTNSSQ 117
>d2c3ba1 b.62.1.1 (A:1-171) Cyclophilin (eukaryotic) {Aspergillus
fumigatus [TaxId: 5085]}
Length = 171
Score = 91.5 bits (226), Expect = 2e-22
Identities = 48/108 (44%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 291 MDYDGYVRLVTSLGHINLELYCNVFPKTCENFMKHCENGY---YNGTKFHRSIRNFMIQG 347
++Y T +G I L+ PKT +NF + C+ Y + FHR I NFMIQG
Sbjct: 8 VEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQG 67
Query: 348 GDP-TGTGTGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
GD G GTGG SI+G F D + H +G+LSMAN+GPNTN SQ
Sbjct: 68 GDFTRGNGTGGRSIYGDKFAD-ENFSRKHDKKGILSMANAGPNTNGSQ 114
>d2fu0a1 b.62.1.1 (A:5-159) Putative cyclophilin PFE0505w
{Plasmodium falciparum [TaxId: 5833]}
Length = 155
Score = 90.8 bits (224), Expect = 2e-22
Identities = 51/98 (52%), Positives = 66/98 (67%)
Query: 297 VRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTG 356
+ T++G I++ L+ KT +NF H NGYYN FHR I++FM+Q GDP+G GTG
Sbjct: 4 AIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTG 63
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
GESIWG FEDEF + H+ ++SMAN GPNTN SQ
Sbjct: 64 GESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQ 101
>d2igva1 b.62.1.1 (A:1-172) Cyclophilin (eukaryotic) {Caenorhabditis
elegans, isoform 3 [TaxId: 6239]}
Length = 172
Score = 89.1 bits (220), Expect = 1e-21
Identities = 51/103 (49%), Positives = 60/103 (58%), Gaps = 12/103 (11%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHCEN----------GYYNGTKFHRSIRNFMIQGGDP 350
+ G I +ELY +V PKT NF C ++ G+KFHR I NFMIQGGD
Sbjct: 15 KASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDF 74
Query: 351 -TGTGTGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNT 392
G GTGGESI+G+ F DE G GVLSMAN+GPNTN
Sbjct: 75 TRGNGTGGESIYGEKFPDENFKEKHT-GPGVLSMANAGPNTNG 116
>d1h0pa_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Caenorhabditis
elegans, isoform 5 [TaxId: 6239]}
Length = 182
Score = 87.2 bits (215), Expect = 7e-21
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHCE---NGYYNGTKFHRSIRNFMIQGGDPT-GTGTG 356
+G I + L+ PKT NF++ + Y G+KFHR I +FMIQGGD T G GTG
Sbjct: 18 KPIGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTG 77
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
G SI+G+ F DE + G G LSMAN+G +TN SQ
Sbjct: 78 GRSIYGEKFADENFKLKHY-GAGWLSMANAGADTNGSQ 114
>d2rmca_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Mouse (Mus
musculus), variant C [TaxId: 10090]}
Length = 182
Score = 86.4 bits (213), Expect = 1e-20
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHCENG---YYNGTKFHRSIRNFMIQGGDPT-GTGTG 356
+G I + L+ NV PKT ENF+ Y G+ FHR I++FMIQGGD T GTG
Sbjct: 19 KDVGRIVIGLFGNVVPKTVENFVALATGEKGYGYKGSIFHRVIKDFMIQGGDFTARDGTG 78
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
G SI+G+ F DE + G G +SMAN+GP+TN SQ
Sbjct: 79 GMSIYGETFPDENFKLKHY-GIGWVSMANAGPDTNGSQ 115
>d2a2na1 b.62.1.1 (A:483-646) Peptidylprolyl isomerase domain and WD
repeat-containing protein 1, PPWD1, C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 164
Score = 85.4 bits (210), Expect = 2e-20
Identities = 57/98 (58%), Positives = 64/98 (65%)
Query: 297 VRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTG 356
+ TS+G I+ +L+ PKT ENF H NGYYNG FHR I+ FMIQ GDPTGTG G
Sbjct: 12 AIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMG 71
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
GESIWG FEDEF H LSMAN+G NTN SQ
Sbjct: 72 GESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQ 109
>d1lopa_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA
{Escherichia coli [TaxId: 562]}
Length = 164
Score = 85.3 bits (210), Expect = 2e-20
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 297 VRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTG 356
V T+ G I ++ + + P+T +NF+ +C G+YN T FHR I FMIQGG
Sbjct: 2 VTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQ 61
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
+P ++E +T + P++ T+Q
Sbjct: 62 K--ATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQ 97
>d2z6wa1 b.62.1.1 (A:2-165) Mitochondrial peptidyl-prolyl cis-trans
isomerase, cyclophilin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 82.6 bits (203), Expect = 2e-19
Identities = 49/98 (50%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHCENGY---YNGTKFHRSIRNFMIQGGD-PTGTGTG 356
LG + LEL +V PKT ENF C Y G+ FHR I +FM Q GD GTG
Sbjct: 14 KPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTG 73
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
G+SI+G F D H G GVLSMAN+GPNTN SQ
Sbjct: 74 GKSIYGSRFPD-ENFTLKHVGPGVLSMANAGPNTNGSQ 110
>d1ihga2 b.62.1.1 (A:2-196) Cyclophilin 40 isomerase domain {Cow
(Bos taurus) [TaxId: 9913]}
Length = 195
Score = 83.0 bits (204), Expect = 2e-19
Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 13/107 (12%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHCEN-----------GYYNGTKFHRSIRNFMIQGGD 349
+G I LEL+ ++ PKT ENF C ++ G FHR I+ FMIQGGD
Sbjct: 26 ERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGD 85
Query: 350 -PTGTGTGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQL 395
GTGGESI+G+ FEDE +Y H G+LSMAN+G NTN SQ
Sbjct: 86 FSNQNGTGGESIYGEKFEDEN-FHYKHDKEGLLSMANAGSNTNGSQF 131
>d1xo7a_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Trypanosoma cruzi
[TaxId: 5693]}
Length = 166
Score = 81.0 bits (199), Expect = 7e-19
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHC---ENGYYNGTKFHRSIRNFMIQGGDPT-GTGTG 356
+G + + L+ N PKT ENF + Y G+ FHR IRNFMIQGGD T GTG
Sbjct: 17 EPVGRVVIGLFGNDVPKTVENFKQLASGENGFGYKGSIFHRVIRNFMIQGGDFTNFDGTG 76
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
G+SI+G F + + G +SMAN+GPN+N SQ
Sbjct: 77 GKSIYGTRF--DDENLKIKHFVGAVSMANAGPNSNGSQ 112
>d1qoia_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Human (Homo
sapiens), U4/U6 snRNP-specific cyclophilin snucyp-20
[TaxId: 9606]}
Length = 173
Score = 74.9 bits (183), Expect = 1e-16
Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHCENGY--------YNGTKFHRSIRNFMIQGGDPT- 351
+G + +EL+ +V PKT ENF + C + Y G+ FHR I++FMIQGGD
Sbjct: 18 QEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVN 77
Query: 352 GTGTGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
G GTG SI+ PF DE H+ G+LSMANSGP+TN Q
Sbjct: 78 GDGTGVASIYRGPFADEN-FKLRHSAPGLLSMANSGPSTNGCQ 119
>d1v9ta_ b.62.1.1 (A:) Peptidyl-prolyl cis-trans isomerase A, PpiA
{Escherichia coli [TaxId: 562]}
Length = 166
Score = 72.3 bits (176), Expect = 9e-16
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 297 VRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTGTG 356
V L TS G+I LEL P + +NF+ + +G+YN T FHR I FMIQGG T
Sbjct: 7 VLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQ 66
Query: 357 GESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
P ++E +T + + ++ TSQ
Sbjct: 67 K--KPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQ 102
>d2r99a1 b.62.1.1 (A:139-299) Mitochondrial peptidyl-prolyl
cis-trans isomerase, cyclophilin F {Human (Homo sapiens)
[TaxId: 9606]}
Length = 161
Score = 72.2 bits (176), Expect = 1e-15
Identities = 41/97 (42%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHC---ENGYYNGTKFHRSIRNFMIQGGDPTGTGTGG 357
G I + L +V P T ENF C + + G+ FHR I FM QGGD T G
Sbjct: 13 KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTG 72
Query: 358 ESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQ 394
D+ HTG G+LSMANSGPNTN SQ
Sbjct: 73 GKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQ 109
>d1z81a1 b.62.1.1 (A:25-210) Cyclophilin (eukaryotic) {Plasmodium
yoelii [TaxId: 5861]}
Length = 186
Score = 70.3 bits (171), Expect = 7e-15
Identities = 42/103 (40%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 301 TSLGHINLELYCNVFPKTCENFMKHCENGY--------YNGTKFHRSIRNFMIQGGDPTG 352
LG EL+ N+ PKT ENF + C Y Y T FHR I+ FMIQGGD
Sbjct: 28 NFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFIN 87
Query: 353 TGTGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNTNTSQL 395
G D+ + H G+LSMANSGPNTN Q
Sbjct: 88 HNGSGSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQF 130
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 40.5 bits (93), Expect = 2e-04
Identities = 26/223 (11%), Positives = 57/223 (25%), Gaps = 9/223 (4%)
Query: 170 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQD 229
I+ + +GL D +L+ D + + + K+ K + P AI +
Sbjct: 35 ISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG 93
Query: 230 S--IMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTF 287
+ + D+ I NGD + ST + + + D + +
Sbjct: 94 RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST 153
Query: 288 IEVMDYDGYVRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQG 347
+ S + + E + + ++
Sbjct: 154 NPLGGVYYV-----SPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 208
Query: 348 GDPTGTGTGGESIWGKPFEDEFKPNYTHTGRGVLSMANSGPNT 390
T G + + + L +A G
Sbjct: 209 DGVTIQPFGATIPYYFTGHEGPD-SCCIDSDDNLYVAMYGQGR 250
>d1pd0a4 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 173
Score = 36.9 bits (85), Expect = 0.002
Identities = 9/50 (18%), Positives = 16/50 (32%), Gaps = 14/50 (28%)
Query: 74 PHLISLHVIDPNSDE--------------MPVQERCSFEKLQPDGAYLLD 109
P + SLH + + +P + + G YL+D
Sbjct: 1 PDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLID 50
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase
(Pantoate-beta-alanine ligase, PanC) {Thermus
thermophilus [TaxId: 274]}
Length = 276
Score = 32.5 bits (73), Expect = 0.063
Identities = 23/204 (11%), Positives = 52/204 (25%), Gaps = 16/204 (7%)
Query: 15 ISLDDRSFALYSATIMDIPSSVVYLYPHLIRPEISLDDRSFALYSATIMDIPSSVVYLY- 73
++L +R+ ++ V++ P P L + + V L+
Sbjct: 33 LALVERARRENPFVVV-----SVFVNPLQFGPGEDYHRYPRDLERDRALLQEAGVDLLFA 87
Query: 74 -PHLISLHVIDPNSDEMPVQERCSFEKLQPDG----AYLLDIRIANLSRPLKPVTIIKDL 128
++ +E G + R+ L +P + KD
Sbjct: 88 PGVEEMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDY 147
Query: 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188
++ + MV E++ T + + + A
Sbjct: 148 QQ-----LLVVRRMVRDLGFPVEVVGVPTVREEDGLALSSRNVYLSPETRKKAPVLYRAL 202
Query: 189 LYWTDSETNKLEVSSLDGKKRKVL 212
L + V+ + L
Sbjct: 203 LAMREVAGQGGSVAEALRAGEEAL 226
>d1pd0a1 a.71.2.1 (A:647-753) Sec24 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 107
Score = 30.9 bits (70), Expect = 0.077
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 14 EISLDDRSFALYSATIMDIPSSVVYLY 40
+ D R+ AL + + + + +Y
Sbjct: 81 IVPSDHRASALNNLESLPLKYLIKNIY 107
Score = 30.9 bits (70), Expect = 0.077
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 47 EISLDDRSFALYSATIMDIPSSVVYLY 73
+ D R+ AL + + + + +Y
Sbjct: 81 IVPSDHRASALNNLESLPLKYLIKNIY 107
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens
[TaxId: 358]}
Length = 295
Score = 30.4 bits (67), Expect = 0.37
Identities = 20/170 (11%), Positives = 40/170 (23%), Gaps = 9/170 (5%)
Query: 183 DWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPK 242
D + +W + +L L ++ V A+A + +
Sbjct: 26 DPASGTAWWFNILERELHELHLASGRKTV--HALPFMGSALAKISDSK--QLIASDDGLF 81
Query: 243 IERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLVTS 302
+ A H ++ D N + + L GR +
Sbjct: 82 LRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAK---- 137
Query: 303 LGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTG 352
G + P + + + + G PTG
Sbjct: 138 -GKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG 186
>d2vnud4 b.40.4.16 (D:495-910) Exosome complex exonuclease RRP44
{Saccharomyces cerevisiae [TaxId: 4932]}
Length = 416
Score = 29.2 bits (64), Expect = 0.88
Identities = 26/186 (13%), Positives = 54/186 (29%), Gaps = 13/186 (6%)
Query: 96 SFEKLQPDGAYLLDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISC 155
+KL P+G + + + IA+++ +KP T + Y + C
Sbjct: 61 HAKKL-PNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRIDMLPMLLGTDLC 119
Query: 156 CTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE 215
+ +I + + + + + + +
Sbjct: 120 SLKPY------VDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRIDDKTQN 173
Query: 216 DIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNN 275
D AL+ + ++E GA+N KV +DS PN + I
Sbjct: 174 DELTMGMRALLKLSVKLKQ------KRLEAGALNLASPEVKVHMDSETSDPNEVEIKKLL 227
Query: 276 RLLYWI 281
+
Sbjct: 228 ATNSLV 233
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 28.9 bits (64), Expect = 0.95
Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 15/90 (16%)
Query: 215 EDIDQPRAIALVPQDSIMFWTD------WGEVPKIERGAMNG-----DPRHRKVIVDSTI 263
+ + I V + D + + ++ G P +V+ +
Sbjct: 147 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEG-F 205
Query: 264 FWPNGIAIDFNNRLLY---WIDGRLTFIEV 290
+ NGI I + + +Y + ++ E
Sbjct: 206 DFANGINISPDGKYVYIAELLAHKIHVYEK 235
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 28.5 bits (62), Expect = 1.5
Identities = 24/163 (14%), Positives = 37/163 (22%), Gaps = 17/163 (10%)
Query: 199 LEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNG-DPRHRKV 257
+E+ ++ KV EDI EV G + D + K
Sbjct: 1 MEIPVIEPLFTKVT--EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK 58
Query: 258 IV------DSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLVTSLGHINLELY 311
V + P G D + L+ D RL + V + +
Sbjct: 59 TVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGR---- 114
Query: 312 CNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGGDPTGTG 354
N G T + G
Sbjct: 115 ----RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFG 153
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 27.9 bits (60), Expect = 2.3
Identities = 17/173 (9%), Positives = 43/173 (24%), Gaps = 6/173 (3%)
Query: 172 NGLITPDGLAIDWLTEKLYWTDSETN-KLEVSSLDGKKRKVLYWEDIDQPRAIALVPQD- 229
+ ++P G+A+D +Y T ++ + VL + + QP+ +A+
Sbjct: 11 DFRLSPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT 69
Query: 230 ---SIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLT 286
+ + + D N + +
Sbjct: 70 VYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK 129
Query: 287 FIEVMDYDGYVRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRS 339
V+ + G + +Y ++ N +
Sbjct: 130 TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDIT 182
Score = 26.7 bits (57), Expect = 4.2
Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 15/170 (8%)
Query: 136 YYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE 195
+ ++ + GL PDG+A+D + +Y TD++
Sbjct: 101 EGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTD 159
Query: 196 TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHR 255
N++ + + VL + DI P IA+ ++ ++ + +
Sbjct: 160 NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTN--QVVK--LLAGSTTS 215
Query: 256 KVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLVTSLGH 305
V+ + + P +A+D + +Y D + V +TSL H
Sbjct: 216 TVLPFTGLNTPLAVAVDSDRT-VYVADR---------GNDRVVKLTSLEH 255
>d1koea_ d.169.1.5 (A:) Endostatin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 172
Score = 27.2 bits (60), Expect = 2.8
Identities = 7/40 (17%), Positives = 12/40 (30%)
Query: 158 FDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETN 197
F G+ + D L +K W S+ +
Sbjct: 81 FSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPS 120
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 166
Score = 26.7 bits (58), Expect = 3.4
Identities = 15/152 (9%), Positives = 34/152 (22%), Gaps = 16/152 (10%)
Query: 129 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 188
EEG + + HG + TFD N ++ G +
Sbjct: 25 EEGHEVYIASFERGTITGKHGYSVKVDLTFDKVNPEEFDALVLPG----------GRAPE 74
Query: 189 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAM 248
+ + + K + ++ + G +
Sbjct: 75 RVRLNEKAVSIARKMFSEGKPVASICHGPQILISAGVL--RGRKGTSYPGIKDDMIN--A 130
Query: 249 NGDPRHRKVIVDSTIFWPNGI--AIDFNNRLL 278
+ +V+VD + +
Sbjct: 131 GVEWVDAEVVVDGNWVSSRVPADLYAWMREFV 162
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 26.7 bits (57), Expect = 5.7
Identities = 19/171 (11%), Positives = 42/171 (24%)
Query: 136 YYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE 195
+ + +D G + G+ + ++ L + + +
Sbjct: 148 KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 207
Query: 196 TNKLEVSSLDGKKRKVLYWEDIDQPRAIALVPQDSIMFWTDWGEVPKIERGAMNGDPRHR 255
+ + + D I + P ++ D
Sbjct: 208 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS 267
Query: 256 KVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFIEVMDYDGYVRLVTSLGHI 306
K T P G +D + + L + I V + G L+ G
Sbjct: 268 KEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 318
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 26.1 bits (56), Expect = 8.6
Identities = 16/185 (8%), Positives = 50/185 (27%), Gaps = 6/185 (3%)
Query: 174 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK-----VLYWEDIDQPRAIALVPQ 228
P G+A++ + D+ +++++ +G+ + + P +A+V
Sbjct: 22 FTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRN 80
Query: 229 DSIMFWTDWGEVPKIERGAMNGDPRHRKVIVDSTIFWPNGIAIDFNNRLLYWIDGRLTFI 288
+ T+ +I+ G + + ++ R+
Sbjct: 81 SGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIF 140
Query: 289 EVMDYDGYVRLVTSLGHINLELYCNVFPKTCENFMKHCENGYYNGTKFHRSIRNFMIQGG 348
+ + + + N + + + +N +
Sbjct: 141 DQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITN 200
Query: 349 DPTGT 353
P G
Sbjct: 201 YPIGV 205
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.139 0.438
Gapped
Lambda K H
0.267 0.0680 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,627,337
Number of extensions: 82067
Number of successful extensions: 248
Number of sequences better than 10.0: 1
Number of HSP's gapped: 207
Number of HSP's successfully gapped: 57
Length of query: 395
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 308
Effective length of database: 1,213,086
Effective search space: 373630488
Effective search space used: 373630488
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (24.7 bits)