Query psy1363
Match_columns 756
No_of_seqs 309 out of 1408
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 16:09:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1363.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1363hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02995 DUF229: Protein of un 100.0 1.4E-96 3E-101 839.3 39.7 486 148-676 2-497 (497)
2 COG3083 Predicted hydrolase of 100.0 1.8E-30 3.9E-35 282.5 17.4 255 302-613 257-537 (600)
3 TIGR03417 chol_sulfatase choli 100.0 2.6E-28 5.7E-33 280.3 22.8 263 304-586 2-349 (500)
4 PRK13759 arylsulfatase; Provis 99.9 1.7E-26 3.7E-31 264.4 23.4 272 302-586 4-368 (485)
5 COG3119 AslA Arylsulfatase A a 99.9 3.2E-26 6.9E-31 261.4 20.7 272 303-586 3-361 (475)
6 PF00884 Sulfatase: Sulfatase; 99.9 1.1E-24 2.4E-29 231.6 19.0 257 305-583 1-308 (308)
7 KOG3867|consensus 99.9 1.6E-24 3.5E-29 243.5 16.6 273 302-587 27-376 (528)
8 PRK12363 phosphoglycerol trans 99.9 2.5E-20 5.4E-25 217.2 24.0 272 302-613 154-460 (703)
9 PRK03776 phosphoglycerol trans 99.8 6.5E-20 1.4E-24 214.0 21.9 257 302-585 159-449 (762)
10 KOG3731|consensus 99.8 4.7E-20 1E-24 198.7 17.0 276 302-611 32-381 (541)
11 PRK09598 lipid A phosphoethano 99.8 1.1E-19 2.4E-24 208.5 20.6 237 302-586 221-506 (522)
12 PRK10649 hypothetical protein; 99.8 1.8E-19 3.9E-24 209.7 20.0 268 302-615 234-548 (577)
13 PRK11598 putative metal depend 99.8 5.4E-19 1.2E-23 203.5 19.1 264 303-611 232-540 (545)
14 PRK11560 phosphoethanolamine t 99.8 2.1E-18 4.5E-23 198.8 20.6 248 302-586 245-541 (558)
15 COG1368 MdoB Phosphoglycerol t 99.3 5.8E-11 1.2E-15 141.1 15.5 251 302-585 259-554 (650)
16 COG2194 Predicted membrane-ass 99.3 5.1E-11 1.1E-15 137.5 14.6 254 303-585 230-529 (555)
17 PRK05362 phosphopentomutase; P 99.1 2.6E-09 5.7E-14 118.6 16.2 152 380-585 222-382 (394)
18 TIGR01307 pgm_bpd_ind 2,3-bisp 99.0 5.1E-09 1.1E-13 119.1 15.8 179 380-586 303-492 (501)
19 PF01663 Phosphodiest: Type I 99.0 3.4E-09 7.3E-14 116.1 12.2 210 307-523 1-247 (365)
20 TIGR01696 deoB phosphopentomut 98.8 1.4E-07 3E-12 104.2 15.7 152 380-585 215-375 (381)
21 PRK05434 phosphoglyceromutase; 98.7 1.8E-07 3.9E-12 107.2 14.7 116 450-586 370-497 (507)
22 TIGR03397 acid_phos_Burk acid 98.6 3.3E-07 7.1E-12 103.9 12.7 109 467-586 342-455 (483)
23 KOG2125|consensus 98.6 5.6E-07 1.2E-11 103.3 14.1 254 300-587 46-310 (760)
24 TIGR02335 hydr_PhnA phosphonoa 98.5 9.1E-07 2E-11 99.8 14.1 201 304-522 12-241 (408)
25 cd00016 alkPPc Alkaline phosph 98.5 3.3E-06 7.1E-11 94.5 18.1 69 450-522 231-307 (384)
26 PRK12383 putative mutase; Prov 98.3 2.4E-06 5.2E-11 95.3 11.0 163 379-612 231-401 (406)
27 KOG2645|consensus 97.8 0.0001 2.2E-09 82.7 10.8 193 302-524 20-239 (418)
28 PLN02538 2,3-bisphosphoglycera 97.7 0.00065 1.4E-08 78.4 15.2 185 380-586 340-548 (558)
29 COG1524 Uncharacterized protei 97.6 6.7E-05 1.4E-09 85.9 6.1 67 302-370 36-105 (450)
30 PF01676 Metalloenzyme: Metall 97.4 0.00067 1.5E-08 71.8 9.8 114 452-586 125-246 (252)
31 KOG2126|consensus 97.4 0.0022 4.7E-08 76.4 14.7 237 306-586 60-320 (895)
32 COG1015 DeoB Phosphopentomutas 97.4 0.0017 3.7E-08 70.7 12.3 153 380-586 225-386 (397)
33 COG3379 Uncharacterized conser 97.3 0.011 2.4E-07 65.2 17.1 91 306-399 5-109 (471)
34 PF11658 DUF3260: Protein of u 97.0 0.018 4E-07 65.4 15.9 224 301-550 192-437 (518)
35 PF04185 Phosphoesterase: Phos 96.9 0.013 2.8E-07 65.7 14.4 232 323-584 122-376 (376)
36 TIGR03368 cellulose_yhjU cellu 96.6 0.031 6.8E-07 63.3 13.9 222 302-549 191-433 (518)
37 COG0696 GpmI Phosphoglyceromut 96.1 0.014 3.1E-07 65.8 7.9 127 448-610 369-508 (509)
38 KOG4513|consensus 94.6 0.55 1.2E-05 51.6 13.1 91 485-587 428-522 (531)
39 PF08665 PglZ: PglZ domain; I 92.9 1.1 2.4E-05 44.9 11.4 55 307-366 3-60 (181)
40 PRK04024 cofactor-independent 91.3 1.1 2.3E-05 51.1 10.0 101 470-583 294-406 (412)
41 PRK10518 alkaline phosphatase; 90.9 0.54 1.2E-05 54.2 7.2 70 450-523 324-401 (476)
42 smart00098 alkPPc Alkaline pho 89.5 0.79 1.7E-05 52.2 7.0 69 450-522 234-310 (419)
43 TIGR03396 PC_PLC phospholipase 87.6 11 0.00023 45.8 14.9 231 323-586 148-429 (690)
44 PF07394 DUF1501: Protein of u 87.1 1.1 2.4E-05 50.5 6.1 93 485-585 267-367 (392)
45 PF00245 Alk_phosphatase: Alka 85.4 1.1 2.5E-05 51.1 5.2 69 450-522 237-313 (421)
46 TIGR00306 apgM 2,3-bisphosphog 80.6 3.6 7.8E-05 46.7 6.7 54 484-547 310-363 (396)
47 PF00031 Cystatin: Cystatin do 79.1 3.7 8.1E-05 36.2 5.1 59 633-708 3-61 (94)
48 cd00042 CY Substituted updates 76.9 17 0.00036 32.7 8.8 58 632-707 2-59 (105)
49 COG1785 PhoA Alkaline phosphat 74.5 7.4 0.00016 44.9 6.9 68 450-521 280-355 (482)
50 TIGR02535 hyp_Hser_kinase prop 70.3 10 0.00022 43.1 6.8 55 485-547 308-363 (396)
51 PRK04200 cofactor-independent 66.5 12 0.00027 42.4 6.5 54 485-547 307-361 (395)
52 smart00043 CY Cystatin-like do 63.9 16 0.00034 33.1 5.5 62 631-709 4-65 (107)
53 KOG2124|consensus 58.5 8.1 0.00017 47.1 3.2 97 483-586 221-326 (883)
54 PRK04135 cofactor-independent 55.6 19 0.00041 40.9 5.4 83 485-582 303-388 (395)
55 COG3635 Predicted phosphoglyce 53.8 32 0.0007 38.5 6.7 98 472-582 299-407 (408)
56 smart00098 alkPPc Alkaline pho 47.5 33 0.00072 39.3 5.8 93 306-402 2-108 (419)
57 KOG4126|consensus 47.0 76 0.0016 37.0 8.4 91 450-545 325-433 (529)
58 PRK10518 alkaline phosphatase; 45.9 46 0.001 38.7 6.7 96 302-402 67-177 (476)
59 PF00245 Alk_phosphatase: Alka 40.7 34 0.00074 39.2 4.6 93 306-402 3-107 (421)
60 TIGR01638 Atha_cystat_rel Arab 37.7 1.1E+02 0.0024 27.6 6.3 64 638-719 9-77 (92)
61 PF07430 PP1: Phloem filament 32.2 2.2E+02 0.0047 29.2 8.0 66 638-720 122-190 (202)
62 KOG4126|consensus 23.9 1.4E+02 0.003 34.9 5.7 97 303-401 71-188 (529)
No 1
>PF02995 DUF229: Protein of unknown function (DUF229); InterPro: IPR004245 Members of this family are uncharacterised with a long conserved region that may contain several domains.
Probab=100.00 E-value=1.4e-96 Score=839.32 Aligned_cols=486 Identities=40% Similarity=0.652 Sum_probs=415.4
Q ss_pred CC-ccccCCCCCCCCCeEEeec----ceEEEEeccccccccCCCCCceeeEEEEEEeeccCCCCccccccccccCCCCCC
Q psy1363 148 PE-SFESCRGWNDGKPRLVGSN----RTFLFIIKSALPYYVGNSTGSIQCNYRAFTWKYEQGSNKYGTMRTMIKSGPDGN 222 (756)
Q Consensus 148 ~~-~~~C~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~~~~~~~~~~C~y~~i~~r~~~~~n~~~~~~~~~~~~~d~~ 222 (756)
|. .+.|++. .++.+++.+ .+.+.+++.+++.+. .+..+++|+|++|+ |.++..+.++.+..
T Consensus 2 ~~~~~~C~~~---~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~C~y~~i~-r~~d~~~~~~~~~~--------- 67 (497)
T PF02995_consen 2 PEPYKKCSKD---FDLTTVLFDNKWNYYHLNINEDIWKIYN-QNNKDINCCYRCIE-RKNDNSNIDYSWWF--------- 67 (497)
T ss_pred CCCCCCCCCc---ccCeEEEEeCCCCeEEEEecHHHHHHhc-CCCCCcEEEEEEEE-ECCCccccccceee---------
Confidence 45 7889998 667777765 345666665665555 45788999999999 98666555543211
Q ss_pred cccCcceeecCCCCCCCCCcccccccEEEEEEecCCeeee-eeccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy1363 223 RTGGLAFTRYSRKVPLTSPVQILSDEFIRVDCSLDKVEVY-TDFFSFVPEPTPVSDPQSRDPQSRVPQSDLPVPRPPDPP 301 (756)
Q Consensus 223 ~~~~~~~~~f~~~~~~~~~~~~~~~e~i~v~C~~~~~~~y-~~~~~~v~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 301 (756)
. .+.+|+.++. + |+++|||+|+|+.+++++| +++|.+++++...+.+ .+.. .++ .
T Consensus 68 ---~-~~~~~~~~~~----v-p~~~e~v~v~C~~~~~~~~~~~~~~fv~~~~~~~~~---~~~~--------~~~----~ 123 (497)
T PF02995_consen 68 ---F-PGPPFEQSFS----V-PVDCEFVEVECWENSKEVYQKDVFFFVHPQIIPKKP---KKKS--------KSS----S 123 (497)
T ss_pred ---c-cccccccccc----c-cCCceEEEEEEECCCceEEeecceEEecCccccccc---cccc--------ccc----c
Confidence 1 1234556643 6 8899999999999887765 8889998864432211 0100 011 3
Q ss_pred CCCCeEEEEEEcCCCchhhhhhhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcC--CCccccccccC-CCCCCCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNFLRQMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTG--MSEKELEQTCY-PTPESTF 378 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~R~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG--~~~~~~~~~~~-~~~~~~l 378 (756)
.++|||+|||+||+||++|+|+||+|++||++ ++|++|.|||+||++|+||++||||| ....++...|. ....+++
T Consensus 124 ~~~~sV~ilgiDS~Sr~~f~R~mPkT~~~l~~-~~~~~f~gyn~vgdnt~~Nl~alltG~~~~~~~~~~~~~~~~~~~~~ 202 (497)
T PF02995_consen 124 ESKPSVLILGIDSMSRMNFRRSMPKTVKFLRE-LGAVEFKGYNKVGDNTFPNLMALLTGKIFSEKELKADCNKPYCKGYL 202 (497)
T ss_pred CCCCcEEEEEeeccChhhhhhcCcHHHHHHHh-CCCEEEccccccCCCcHHHHHHHHhcCCCCchhhccccccccCCCCc
Confidence 77899999999999999999999999999996 99999999999999999999999999 66777776665 4566789
Q ss_pred CChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHH
Q psy1363 379 DDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEY 458 (756)
Q Consensus 379 d~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy 458 (756)
|.+|+||+.||++||+|+|+|||...++|+|+.+||.++|+|||+|||+.+.+.........+. .|.|++..|++++||
T Consensus 203 d~~~~iw~~fk~~GY~T~~~ED~~~~~~f~y~~~GF~~~ptDhy~rpf~~~~e~~~~~~~~~~~-~C~g~~~~~~~~~dy 281 (497)
T PF02995_consen 203 DKCPFIWKDFKKAGYVTAYAEDWPSIGTFNYRKKGFKKQPTDHYLRPFMLAAEKHLNKFRRFGL-KCLGGRESHEYLLDY 281 (497)
T ss_pred ccccHHHHHHhhcCceEEEecCcccccccccCCCCCCCCCCCcccchHHHHHHHhccceeccCC-CccCchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999875544332222 399999999999999
Q ss_pred HHHHHHHhcCCceEEEEecCccCcccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCcCCCccccc
Q psy1363 459 ALKYTSALRNYFYFAFVWTSSLTHDYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETYQGHLEERL 538 (756)
Q Consensus 459 ~~~Fi~~~~~~PfF~~~w~~~~~Hdy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~~G~~E~rv 538 (756)
+.+|+++|+++|+|+++|+++++|++.+.+..+|+++.++|++|++.|+++||+||||||||.|+|++|.|.+|++|+|+
T Consensus 282 ~~~f~~~y~~~~~F~~~w~~~~~h~~~~~~~~~D~~~~~~l~~~~~~g~l~nT~vi~~SDHG~R~g~~r~t~~G~~Eerl 361 (497)
T PF02995_consen 282 IEQFMEAYKDRPKFGFFWFNSLSHDDFNGPSSLDDDLLDFLEKLQEEGVLDNTFVIFMSDHGLRFGSFRETSQGKLEERL 361 (497)
T ss_pred HHHHHHHhhccceeeEEEeccccccccchhHHHHHHHHHHHHHhhhcCcccccEEEEEcCCCcccCccccccccchhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCCchhhhccCCCCCCCCCCCcccCCccCCCCCcc
Q psy1363 539 PFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSLKDELLRQDRGPDKDNIPRGISLFRNIPDTRGC 618 (756)
Q Consensus 539 P~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~~~~~~~~~~~~~~~~~~~g~SLF~~iP~~RtC 618 (756)
|||+|++|+||+++||++++||+.|++||+|+||||+||+||+.++...+..... ......+++|+|||.|||++|||
T Consensus 362 P~l~i~lP~~fr~~~p~~~~nL~~N~~rL~T~~Dlh~TL~~il~~~~~~~~~~~~--~~~~~~~~~g~SLf~~iP~~RtC 439 (497)
T PF02995_consen 362 PFLFISLPPWFREKYPEAVENLKENQNRLTTPFDLHATLKDILNLQELSDFQKRP--RMFSLECPRGQSLFRPIPENRTC 439 (497)
T ss_pred ccceeEcCHHHHhHHHHHHHHHHHHHhccCChhHHHHHHHHHhcccccccccccc--cccccCCCcceecCccCCCCCCc
Confidence 9999999999999999999999999999999999999999999998754322111 11234689999999999999999
Q ss_pred ccccccCcccccccccccccCCcHHHHHHHHHHHHHHHHHH-hhcccccccccccccee
Q psy1363 619 HQAGIPAHYCTCHNKLIRTSLESPTVRELSQTLVSHINEVL-LKNLTDKCHQLKVHKIL 676 (756)
Q Consensus 619 ~~a~I~~~~C~C~~~~~~i~~~~~~~~~~a~~~v~~iN~~l-~~~~~~~C~~l~l~~v~ 676 (756)
++||||+|||+|+.+++ ++.+++.+.++|+++|++||++| +.+++++|++|+|++|.
T Consensus 440 ~~a~I~~~~C~C~~~~~-~~~~~~~~~~~a~~~v~~iN~~l~~~~~~~~C~~l~l~~v~ 497 (497)
T PF02995_consen 440 EDAGIPPHWCTCEGWKT-IPTNDSLVQRIAKFLVDHINEYLKEQNLTSLCARLELKKVH 497 (497)
T ss_pred cCCCChhhcccCcCccc-cccCcHHHHHHHHHHHHHHHHHHhccCCCCCCccCCcCcCC
Confidence 99999999999999999 99999999999999999999999 55677899999999984
No 2
>COG3083 Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only]
Probab=99.97 E-value=1.8e-30 Score=282.50 Aligned_cols=255 Identities=19% Similarity=0.300 Sum_probs=200.6
Q ss_pred CCCCeEEEEEEcCCCchhh-hhhhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCCCCCCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNF-LRQMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPESTFDD 380 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f-~R~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~~~ld~ 380 (756)
..+|||++|++|+++.+++ .+.||++.+|..+ +++|.+|++.|+.|..+++|||+|.++.+++.+... ..
T Consensus 257 a~~~NillI~vdglR~d~l~~~~MP~la~Fa~q---~i~FtnHySsGN~t~~GlfGLFYGL~~~Y~d~vls~------~t 327 (600)
T COG3083 257 AHGPNILLITVDGLRYDALDEKQMPNLADFANQ---NIRFTNHYSSGNSTQAGLFGLFYGLSATYWDSVLSA------RT 327 (600)
T ss_pred CCCCCEEEEEeccccccccChhhChhHHHHHhh---hcccccccCCCCccccchheeeccCChhHHHHHHhc------CC
Confidence 7789999999999999999 6789999999998 899999999999999999999999999999877432 35
Q ss_pred hhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHHHH
Q psy1363 381 CPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEYAL 460 (756)
Q Consensus 381 ~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy~~ 460 (756)
.|.+.+.+++.||+ +|.|. ..||..++.| +..+......- .. -.+. -.+...+...
T Consensus 328 ~p~Lie~L~qq~YQ---------fglfs--s~~F~splfr---qalf~~l~~~~--~~------t~~~--~~~~~t~~~~ 383 (600)
T COG3083 328 PPALIEALRQQNYQ---------FGLFS--SDGFKSPLFR---QALFSDLSLPA--LV------TQSS--DDERATQWLL 383 (600)
T ss_pred chHHHHHHHhcCce---------EEeec--cCCCCCchHH---HHHhhhcCccc--cc------cCCc--hHHHHHHHHH
Confidence 68999999999999 45554 4678877765 33333221100 00 0010 1234444444
Q ss_pred HHHHHh-cCCceEEEEecCccC-----------------cccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCC
Q psy1363 461 KYTSAL-RNYFYFAFVWTSSLT-----------------HDYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLR 522 (756)
Q Consensus 461 ~Fi~~~-~~~PfF~~~w~~~~~-----------------Hdy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r 522 (756)
.|.+.. +++|||+|+.++..+ .+|.+.+..+|.+++++|+.|++.|.+|||+||+|||||..
T Consensus 384 wf~~~~~~d~PwFs~L~l~~~~~~~~~~s~q~~~~~~~~~~Y~~a~~~vD~~I~~vLe~L~~~~~L~NTvVIITs~HG~e 463 (600)
T COG3083 384 WFGRYRDEDNPWFSYLSLNSSHANDDPSSNQAKARPPFKNRYQNALREVDSQIGRVLEQLRNSGLLDNTVVIITADHGEE 463 (600)
T ss_pred HHHHhhccCCCceEEEEccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcccccceEEEEECCCCcc
Confidence 444432 568999999887521 35778999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCc------cccceeEEEEcCcccccccccccccccccccceeecccHHHHHH-HhhCCCCCchhhhccCC
Q psy1363 523 WGDFRETYQGHL------EERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFK-DLIDVSSLKDELLRQDR 595 (756)
Q Consensus 523 ~g~~r~t~~G~~------E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~-~llg~~~~~~~~~~~~~ 595 (756)
|.+.+..++|.- |..||++ |+||+.-. + +.+.++||.|+++||+ +++|+++|
T Consensus 464 Fne~~~~ywG~~t~ysr~qlqVPlv-ihwpg~~~----~-------~v~~lTsH~Dl~~tLMq~ll~V~np--------- 522 (600)
T COG3083 464 FNEEEQNYWGHGTNYSRYQLQVPLV-IHWPGTPA----G-------RVNHLTSHLDLMTTLMQRLLGVSNP--------- 522 (600)
T ss_pred cCccccccccCCCccccceecccEE-EEeCCCcc----h-------hhcCccchhhhHHHHHHHHhcCCCC---------
Confidence 988776666654 8899999 89999732 2 2357999999999995 59999863
Q ss_pred CCCCCCCCCcccCCccCC
Q psy1363 596 GPDKDNIPRGISLFRNIP 613 (756)
Q Consensus 596 ~~~~~~~~~g~SLF~~iP 613 (756)
..+++.|+.||.+.+
T Consensus 523 ---~~dYSqG~dLf~~~~ 537 (600)
T COG3083 523 ---PSDYSQGQDLFNESR 537 (600)
T ss_pred ---hhhhhcccchhccCc
Confidence 457999999999765
No 3
>TIGR03417 chol_sulfatase choline-sulfatase.
Probab=99.96 E-value=2.6e-28 Score=280.33 Aligned_cols=263 Identities=16% Similarity=0.094 Sum_probs=178.8
Q ss_pred CCeEEEEEEcCCCchhhhh-------hhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCCC
Q psy1363 304 EYSVLVVGIDAVSRQNFLR-------QMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPES 376 (756)
Q Consensus 304 ~pNVliI~iDSlSr~~f~R-------~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~~ 376 (756)
+||||+|++|+++...+.. .+|+. +.|++ +++.|.+++..++.|.|++.+||||+++...+...+. .
T Consensus 2 rPNIllI~~Dd~r~d~lg~~G~~~~~~TPnL-D~LA~--eGv~F~nay~~~p~C~PSRaSllTG~yp~~~G~~~~~---~ 75 (500)
T TIGR03417 2 RPNILILMADQLNGTLLPDYGPARWLHAPNL-KRLAA--RSVVFDNAYCASPLCAPSRASFMSGQLPSRTGAYDNA---A 75 (500)
T ss_pred CCeEEEEEeCCCCccccccCCCCCcCCCCcH-HHHHH--hCceecccccCCCccHHHHHHHHHCCCHHhcCcccch---h
Confidence 5899999999999887633 35664 44553 3788999998999999999999999999987653211 1
Q ss_pred CC-CChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCC------CCCcchhhhh------hhhhcccccccCCc
Q psy1363 377 TF-DDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPT------DTFYNIFSKE------SEAVIGNTKILNAH 443 (756)
Q Consensus 377 ~l-d~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~------Dhy~rp~~~~------~e~~~~~~~~~~~~ 443 (756)
.+ +..++|.+.||++||.|+++||||..+.- ...||+.... ++...+-+.. ....+.... ..+.
T Consensus 76 ~l~~~~~tl~~~L~~aGY~T~~~GK~H~~~~~--~~~GF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~ 152 (500)
T TIGR03417 76 EFPSDIPTYAHYLRRAGYRTALSGKMHFCGPD--QLHGFEERLTTDIYPADFGWTPDWRKPGERIDWYHNMGSVT-GAGP 152 (500)
T ss_pred hcCcCCCCHHHHHHHCCCeEEEeccccccCCc--cccCcccccccccCccccCCCcccccccccccccccccccc-cCCc
Confidence 23 46789999999999999999999974421 1246654211 1111000000 000000000 0011
Q ss_pred ccCC-cchhHHHHHHHHHHHHHH----hcCCceEEEEecCccCc------------------------------------
Q psy1363 444 LCMG-SQLIFKTVLEYALKYTSA----LRNYFYFAFVWTSSLTH------------------------------------ 482 (756)
Q Consensus 444 ~C~g-~~~~~~~lldy~~~Fi~~----~~~~PfF~~~w~~~~~H------------------------------------ 482 (756)
.+.. .....+.+.+.+.+|+.. ..++|||+++.+...++
T Consensus 153 ~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~kPFFl~vs~~~PH~P~~~p~~y~~~y~~~~~~~p~~~~~~~~~~~~~~~~ 232 (500)
T TIGR03417 153 CERTNQLDYDDEVAFHARQKLYDLARGKDARPFCLTVSFTHPHDPYVIRRKYWDLYEDCEILMPEVAIPYAEQDPHSQRL 232 (500)
T ss_pred CcccccccCCHHHHHHHHHHHHHHhhccCCCCeEEEecCCCCcCCCcCCHHHHhhcCcccCCCCCCCCcccccChhhhhh
Confidence 0100 011123566777777754 35689999986654321
Q ss_pred ---------------------ccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCC-CcCCCccc--cc
Q psy1363 483 ---------------------DYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRE-TYQGHLEE--RL 538 (756)
Q Consensus 483 ---------------------dy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~-t~~G~~E~--rv 538 (756)
.|+++++++|++||++|+.|++.|++|||||||+||||..+|+++. .+...+|+ |+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~il~~L~~~g~~dnTivvf~sDHG~~~G~~g~~~K~~~ye~~~~v 312 (500)
T TIGR03417 233 LDACDLWNFPITDEQIRRARRAYFGAISYLDDKIGELLQTLEETRQADDTIVLFTSDHGDMLGERGLWYKMSFFEGSARV 312 (500)
T ss_pred hhhhccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcEEEEECCCchhhccCCcccccCcccccceE
Confidence 1456778999999999999999999999999999999999887653 23344554 99
Q ss_pred eeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 539 PFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 539 P~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
||| |++|+.++. + + .+.++++.||+|||++++|++.+
T Consensus 313 Pli-i~~p~~~~~---~-----~--~~~~v~~~Di~pTil~l~g~~~~ 349 (500)
T TIGR03417 313 PLM-VHAPGRFAP---G-----R--VAAPVSTVDLLPTLVDLAGGDMD 349 (500)
T ss_pred eEE-EEeCCCCCC---c-----c--cCCceeehhHHHHHHHHhCCCCc
Confidence 999 899985431 1 1 24689999999999999998853
No 4
>PRK13759 arylsulfatase; Provisional
Probab=99.95 E-value=1.7e-26 Score=264.43 Aligned_cols=272 Identities=15% Similarity=0.146 Sum_probs=181.2
Q ss_pred CCCCeEEEEEEcCCCchhhhh------hhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNFLR------QMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPE 375 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~R------~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~ 375 (756)
.++||||+|++|++++..+.. .+|+.-+++++ ++.|.++++.+..|.|++.+||||+++.+.+...+...
T Consensus 4 ~~rPNIl~I~~Ddlr~d~l~~~G~~~~~TPnld~La~~---G~~F~nay~~~p~c~psr~sl~TG~yp~~~g~~~~~~~- 79 (485)
T PRK13759 4 TKKPNIILIMVDQMRGDCLGCNGNKAVETPNLDMLASE---GYNFENAYSAVPSCTPARAALLTGLSQWHHGRVGYGDV- 79 (485)
T ss_pred CCCCCEEEEEECCCCHHHHHhcCCCcCCCccHHHHHhc---CceeeceecCCCcchhhHHHHHhcCChhhcCccccccc-
Confidence 457999999999999987742 47776555554 78899888888999999999999999998765322110
Q ss_pred CCCCChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCC-CC--------------cchhhhhhhhhc-cc-cc
Q psy1363 376 STFDDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTD-TF--------------YNIFSKESEAVI-GN-TK 438 (756)
Q Consensus 376 ~~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~D-hy--------------~rp~~~~~e~~~-~~-~~ 438 (756)
......+++++.|+++||.|+++||||.... ....||+....+ .| ...+..-..... +. ..
T Consensus 80 ~~~~~~~tl~~~l~~~GY~T~~~GK~h~~~~--~~~~gfd~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (485)
T PRK13759 80 VPWNYKNTLPQEFRDAGYYTQCIGKMHVFPQ--RNLLGFHNVLLHDGYLHSGRNEDKSQFDFVSDYLAWLREKAPGKDPD 157 (485)
T ss_pred ccccccchHHHHHHHcCCeeEEecccccCCC--cccCCccceeccccccccccccCcccccccchHHHHhhhhcCCCCCc
Confidence 1112457899999999999999999996321 012455431110 00 001100000000 00 00
Q ss_pred ccC-Cccc---------C-CcchhHHHHHHHHHHHHHHh-cCCceEEEEecCccCcc-----------------------
Q psy1363 439 ILN-AHLC---------M-GSQLIFKTVLEYALKYTSAL-RNYFYFAFVWTSSLTHD----------------------- 483 (756)
Q Consensus 439 ~~~-~~~C---------~-g~~~~~~~lldy~~~Fi~~~-~~~PfF~~~w~~~~~Hd----------------------- 483 (756)
..+ +..+ . ........+.+.+.+|+++. .++|||+++.+...++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~kPfFl~v~~~~pH~P~~~p~~~~~~y~~~~~~~p~~~~ 237 (485)
T PRK13759 158 LTDIGWDCNSWVARPWDLEERLHPTNWVGSESIEFLRRRDPTKPFFLKMSFARPHSPYDPPKRYFDMYKDADIPDPHIGD 237 (485)
T ss_pred ccccccccccccccccccccceeccHHHHHHHHHHHHhCCCCCCeEEEeCCCCCcCCCCCCHHHHHhccccCCCCCCCCc
Confidence 000 0000 0 01112456789999999874 57899999977654221
Q ss_pred --------------------------------cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCC-Cc
Q psy1363 484 --------------------------------YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRE-TY 530 (756)
Q Consensus 484 --------------------------------y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~-t~ 530 (756)
|.+++.++|+.||++++.|++.|+++||||||+||||..+|++.. .+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~l~~~l~~~g~~dnTiiv~tsDHG~~~g~~~~~~k 317 (485)
T PRK13759 238 WEYAEDQDPEGGSIDALRGNLGEEYARRARAAYYGLITHIDHQIGRFLQALKEFGLLDNTIILFVSDHGDMLGDHYLFRK 317 (485)
T ss_pred hhhhcccccccccchhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCeEEEEECCCcccccccccccC
Confidence 344678899999999999999999999999999999998887542 12
Q ss_pred CCCcc--ccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 531 QGHLE--ERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 531 ~G~~E--~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
...+| .|+|++ |++|+..... .+. ...+.++++.||+|||++++|++.+
T Consensus 318 ~~~~e~~~rVPli-i~~p~~~~~~-----~~g-~~~~~~v~~~Di~pTil~l~g~~~p 368 (485)
T PRK13759 318 GYPYEGSAHIPFI-IYDPGGLLAG-----NRG-TVIDQVVELRDIMPTLLDLAGGTIP 368 (485)
T ss_pred CccccccceeeEE-EecCCccccc-----CCC-ceecCcceecchHHHHHHHhCCCCC
Confidence 22344 399999 8999853211 111 1246799999999999999998753
No 5
>COG3119 AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]
Probab=99.94 E-value=3.2e-26 Score=261.42 Aligned_cols=272 Identities=18% Similarity=0.115 Sum_probs=170.8
Q ss_pred CCCeEEEEEEcCCCchhhhhh-------hhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCC---
Q psy1363 303 PEYSVLVVGIDAVSRQNFLRQ-------MSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYP--- 372 (756)
Q Consensus 303 ~~pNVliI~iDSlSr~~f~R~-------mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~--- 372 (756)
++||||+|+.|++++.++... +|+ ++.|++ +++.|.+++..+..|.|++.+|+||+++.+.+.....
T Consensus 3 ~rPNil~i~~Ddlg~~~l~~~g~~~~~~tp~-~d~LA~--~Gv~f~n~y~~~~~c~PsRa~l~TGr~~~~~G~~~~~~~~ 79 (475)
T COG3119 3 KRPNILIIMADDLGYGDLGAYGGPVVGPTPN-IDRLAA--EGVRFTNAYTTSPCCGPSRAALLTGRYPFRTGVGGNAEPP 79 (475)
T ss_pred CCCcEEEEEeccCCCCCCCcCCCccccCCCC-HHHHHh--cCceeeccccCcCCCchhhhHHhhCCCccccccccccCCC
Confidence 489999999999999988532 233 566665 4778999998999999999999999999988765442
Q ss_pred CCCCCCC-ChhHHHHHHHHCCCeEEeeccCCCCCCCCcCC---CCCCCC------CCCCCc-------------------
Q psy1363 373 TPESTFD-DCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFK---SGFAKS------PTDTFY------------------- 423 (756)
Q Consensus 373 ~~~~~ld-~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~---~GF~~~------p~Dhy~------------------- 423 (756)
.....++ ..+++.+.||++||.|+++||||....-.++. .||..- -++...
T Consensus 80 g~~~~l~~~~~Tla~~Lk~~GY~Ta~~GKwHl~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (475)
T COG3119 80 GYPGGLPDEVPTLAELLKEAGYYTALFGKWHLGEKDEDPAGGDHGFDEFYGFLGGLTDEWYPELVDVPPPGDVPEFDQEE 159 (475)
T ss_pred CcccccCcccchHHHHHHHcCChhhhcccccCCCCccCccccccccccccccccccccccccccccCCCCcCcccccccc
Confidence 2233454 78999999999999999999999754211221 233211 000000
Q ss_pred -chhhh--hhhhh-ccccc---------ccCCcccCCcchhH----HHHHHHHHHHHHHh--cCCceEEEEecCccCc--
Q psy1363 424 -NIFSK--ESEAV-IGNTK---------ILNAHLCMGSQLIF----KTVLEYALKYTSAL--RNYFYFAFVWTSSLTH-- 482 (756)
Q Consensus 424 -rp~~~--~~e~~-~~~~~---------~~~~~~C~g~~~~~----~~lldy~~~Fi~~~--~~~PfF~~~w~~~~~H-- 482 (756)
+++.. ..... ....+ ..-.-.|......+ ..+.+....+..+. ..+|+|.+.-.....|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (475)
T COG3119 160 GDPYVAGKDSADLADRFRRQAKEDAPDKPPFLLTAPFAPPAPDPVDFEWPDEYRGFYDRAKRLDRPFFLYLAPPDPHLSR 239 (475)
T ss_pred CchhhhcchhhhhhhhhhhhcccccccCCceEEecCCCCCCCCcccchhhHHHhhhcchhhcccCccccccCCCccCccc
Confidence 00000 00000 00000 00000122211111 12222222222211 2344444432211111
Q ss_pred ---------------------ccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCC----CCCCCCCcCCCccc-
Q psy1363 483 ---------------------DYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLR----WGDFRETYQGHLEE- 536 (756)
Q Consensus 483 ---------------------dy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r----~g~~r~t~~G~~E~- 536 (756)
.|.++++++|++||++|+.|++.|++|||||||+||||.- .+.++..+...+|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~Y~a~v~~~D~~iGrll~~L~~~g~~DnTivvftsDhG~~~~~~~~~~~~~k~~~~egg 319 (475)
T COG3119 240 RLPAADGLPAEEEEDGARLMTVYAACVRYLDDQIGRLLDALKELGLLDNTIVVFTSDHGAWLGAHGTPFRGYKGTLYEGG 319 (475)
T ss_pred cCccchhccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCccCcEEEEeCCCCCcccCCCCcccccccccccCc
Confidence 2678999999999999999999999999999999999942 33444444445664
Q ss_pred -cceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 537 -RLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 537 -rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
|||+| |+||+.++.+ ....+.+++++||.|||++++|++.+
T Consensus 320 ~~VPli-I~~Pg~i~~~--------g~~~~~~v~~~Di~PTll~~aG~~~~ 361 (475)
T COG3119 320 TRVPLI-IRWPGGIKPG--------GRVVDALVSLIDLLPTLLDAAGVPPP 361 (475)
T ss_pred ccceEE-EeccCccCCC--------CccccccchhhHHHHHHHHHcCCCCc
Confidence 99999 8999976532 11236789999999999999999864
No 6
>PF00884 Sulfatase: Sulfatase; InterPro: IPR000917 Sulphatases 3.1.6. from EC are enzymes that hydrolyze various sulphate esters. The sequence of different types of sulphatases are available and have shown to be structurally related [, , ]; these include: arylsulphatase A 3.1.6.8 from EC (ASA), a lysosomal enzyme which hydrolyses cerebroside sulphate; arylsulphatase B 3.1.6.12 from EC (ASB), which hydrolyses the sulphate ester group from N-acetylgalactosamine 4-sulphate residues of dermatan sulphate; arylsulphatase C (ASD) and E (ASE); steryl-sulphatase 3.1.6.2 from EC (STS), a membrane bound microsomal enzyme which hydrolyses 3-beta-hydroxy steroid sulphates; iduronate 2-sulphatase precursor 3.1.6.13 from EC (IDS), a lysosomal enzyme that hydrolyses the 2-sulphate groups from non-reducing-terminal iduronic acid residues in dermatan sulphate and heparan sulphate; N-acetylgalactosamine-6-sulphatase 3.1.6.4 from EC, which hydrolyses the 6-sulphate groups of the N-acetyl-d-galactosamine 6-sulphate units of chondroitin sulphate and the D-galactose 6-sulphate units of keratan sulphate; glucosamine-6-sulphatase 3.1.6.14 from EC (G6S), which hydrolyses the N-acetyl-D-glucosamine 6-sulphate units of heparan sulphate and keratan sulphate; N-sulphoglucosamine sulphohydrolase 3.10.1.1 from EC (sulphamidase), the lysosomal enzyme that catalyses the hydrolysis of N-sulpho-d-glucosamine into glucosamine and sulphate; sea urchin embryo arylsulphatase 3.1.6.1 from EC; green algae arylsulphatase 3.1.6.1 from EC, which plays an important role in the mineralisation of sulphates; and arylsulphatase 3.1.6.1 from EC from Escherichia coli (aslA), Klebsiella aerogenes (gene atsA) and Pseudomonas aeruginosa (gene atsA). ; GO: 0008484 sulfuric ester hydrolase activity, 0008152 metabolic process; PDB: 1P49_A 1FSU_A 2QZU_A 2W5Q_A 2W5T_A 2W5S_A 2W5R_A 3LXQ_A 1HDH_B 1E33_P ....
Probab=99.92 E-value=1.1e-24 Score=231.56 Aligned_cols=257 Identities=18% Similarity=0.234 Sum_probs=168.9
Q ss_pred CeEEEEEEcCCCchhhhh------hhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCC--CC
Q psy1363 305 YSVLVVGIDAVSRQNFLR------QMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTP--ES 376 (756)
Q Consensus 305 pNVliI~iDSlSr~~f~R------~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~--~~ 376 (756)
||||+|++||+++.++.. .+|...++.++ ++.|.++.+.+..|.+++.++|||+++...+....... ..
T Consensus 1 pNVv~i~~Es~~~~~~~~~~~~~~~tP~l~~l~~~---g~~f~~~~s~~~~T~~s~~~~ltG~~~~~~~~~~~~~~~~~~ 77 (308)
T PF00884_consen 1 PNVVLIVLESLRADDLSCYGYPIPTTPNLDRLAEN---GLRFSNAYSSGPWTSPSRFSMLTGLYPHNSGVYSNGPYQQFN 77 (308)
T ss_dssp -EEEEEEETT--TTSSGGGTSSSSSSHHHHHHHHT---SEEESSEE-SSSSHHHHHHHHHHSS-HHHHT-SSSCSTTTCS
T ss_pred CEEEEEEcccCCCCCCCCCCCCcccCHHHHHhhhc---cEEEEEEEeccCccccchhhhccccccccccccccccccccc
Confidence 799999999999876532 37887656654 88999999999999999999999999988664322111 12
Q ss_pred CCCChhHHHHHHHHCCCeEEeeccCCCCCCC--C-cCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcc-----cCCc
Q psy1363 377 TFDDCPFLWKNFSAAGFKTLYAEDSFGMSTF--N-YFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHL-----CMGS 448 (756)
Q Consensus 377 ~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F--~-y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~-----C~g~ 448 (756)
.....+.|++.||++||.|.+++.++....- . +...||+... ..+-+.... ...+ ..... -.+.
T Consensus 78 ~~~~~~~l~~~l~~~GY~t~~~~~~~~~~~~~~~~~~~~gfd~~~----~~~~~~~~~---~~~~-~~~~~~~~~~~~~~ 149 (308)
T PF00884_consen 78 LPSKFPSLPDLLKKAGYRTSFFGPWDASFYNNQAFYPSHGFDYFL----GQPGLSDRI---DNPR-ISGPFNDVNRSNEW 149 (308)
T ss_dssp STTTS--HHHHHHHTT-EEEEEEES-STGGGHHCHCHHTT-SEEE----EESSSGGGT---TSST-TEEECTTTTESTTT
T ss_pred ccccccccHHHHhhcccccceeeccccCccccccccccCCcceEE----eeecccccc---cccc-cccccccccccccc
Confidence 3357789999999999999999998742110 0 1124665311 000000000 0000 00000 0122
Q ss_pred chhHHHHHHHHHHHHHHhcCCceEEEEecCccCc----------------------------ccCChhHHHHHHHHHHHH
Q psy1363 449 QLIFKTVLEYALKYTSALRNYFYFAFVWTSSLTH----------------------------DYLNLPRLGDSILQKFVK 500 (756)
Q Consensus 449 ~~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~~~H----------------------------dy~~~i~~lD~~l~~~L~ 500 (756)
....+.+++.+.+++....++|+|.++.+...++ .|.+.+.++|..|+++++
T Consensus 150 ~~~d~~~~~~~~~~l~~~~~~p~f~~~~~~~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~l~~~~~ 229 (308)
T PF00884_consen 150 GYSDDALFDYAIDFLLNEDDKPFFLFIHTMGPHGPYPYPPDYAEKFPKFSPDIPDKDREMRNNYLNAIAYVDDQLGRFIE 229 (308)
T ss_dssp CEHHHHHHHHHHHHHHCTTTSSEEEEEEE-TTSSSTCTTCCHHHGGTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhhcccccceeEEeeccccccccccccccccccccccccccchhhhHHHHHHHHHHHHHHhhhhhh
Confidence 4567889999999984445899999997764322 245788999999999999
Q ss_pred HHHhCCCCCCEEEEEEcCCCCCCCC---C-CCCcC-CCcc--ccceeEEEEcCcccccccccccccccccccceeecccH
Q psy1363 501 NLNKNGHLNRTILILTSDHGLRWGD---F-RETYQ-GHLE--ERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDL 573 (756)
Q Consensus 501 ~L~~~glldNTiVIf~SDHG~r~g~---~-r~t~~-G~~E--~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl 573 (756)
.|+++|..+||+||++||||..+|+ . ..... ...+ .++|++ |++|+..+. ...++++|+.||
T Consensus 230 ~l~~~~~~d~TiiiitsDHG~~~~e~~~~~~~~~~~~~~~~~~~vP~~-i~~p~~~~~----------~~~~~~~s~~Di 298 (308)
T PF00884_consen 230 YLKEQGLYDNTIIIITSDHGESFGENGHYFHGGKGNDLYEESYHVPLI-IYWPGGEPQ----------QTIDRLVSHIDI 298 (308)
T ss_dssp HHHHTTCGGGEEEEEEESSSSSTGGHHTTSSSSTTHSSSHHHHBEEEE-EECTTSSSC----------EEECS-EEGGGH
T ss_pred hhhhcCCcccceeEEecCcCcccccccccccccccccchhhccccceE-EEcCCCCCC----------cEECCeEEhHHH
Confidence 9999999999999999999999865 1 11211 2333 399999 898886432 235789999999
Q ss_pred HHHHHHhhCC
Q psy1363 574 HETFKDLIDV 583 (756)
Q Consensus 574 ~~TL~~llg~ 583 (756)
+|||++++|+
T Consensus 299 ~pTll~l~Gi 308 (308)
T PF00884_consen 299 APTLLDLLGI 308 (308)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHHhCC
Confidence 9999999985
No 7
>KOG3867|consensus
Probab=99.92 E-value=1.6e-24 Score=243.54 Aligned_cols=273 Identities=16% Similarity=0.039 Sum_probs=181.9
Q ss_pred CCCCeEEEEEEcCCCchhhhhh------hhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccC----
Q psy1363 302 EPEYSVLVVGIDAVSRQNFLRQ------MSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCY---- 371 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~R~------mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~---- 371 (756)
..+||||+|++||++..+...+ .|+ ++.|+. +++.|+++.++..-|.|+|.+||||+++-+.+....
T Consensus 27 ~~~PNillIlaDDlG~gDlg~yG~~~i~TPn-iD~LA~--~Gv~f~n~~~a~s~CtPSRaalLTGr~pirtGm~~~~~~r 103 (528)
T KOG3867|consen 27 TDPPNILLILADDLGWGDLGCYGNKTIRTPN-IDRLAA--EGLLFTNAYAAVSLCSPSRAALLTGRYPIRTGMYHSVIYR 103 (528)
T ss_pred CCCCCEEEEEEccCCCcccccCCCcccCCCC-HHHHHh--cccceecccccccccCchHHHHhcCCCccccccccceeEe
Confidence 5689999999999999887543 566 455553 378899999888899999999999999987654321
Q ss_pred ---CCCCCCC-CChhHHHHHHHHCCCeEEeeccCCCC-C--CCCcCCCCCCCC------------CCCCCcchhh-----
Q psy1363 372 ---PTPESTF-DDCPFLWKNFSAAGFKTLYAEDSFGM-S--TFNYFKSGFAKS------------PTDTFYNIFS----- 427 (756)
Q Consensus 372 ---~~~~~~l-d~~p~Iw~~fk~aGY~T~~~eD~~~~-g--~F~y~~~GF~~~------------p~Dhy~rp~~----- 427 (756)
+...+++ .+++++.+.|+++||.|.++||||.. . .+...+.||+.. +.|++..+..
T Consensus 104 ~~~~~~~gglP~~E~tlae~l~~~GY~T~liGKWHLG~~~~~~~P~~rGFd~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (528)
T KOG3867|consen 104 VHHNFSPGGLPLNETTLAEILQEAGYSTGLIGKWHLGRSDPCYHPTNRGFDYFYGEPELHSPLLGPRDVLDVPEQALQFL 183 (528)
T ss_pred eccCCCCCCcccchhHHHHHHHhCCccccccccccCCCCCCCcCCcccCccccccccccccccccccccccccchhhhhh
Confidence 2333455 58899999999999999999999964 1 122224677642 1222211111
Q ss_pred hhhhhhccccc---ccCCcccCCcchhHHHHHHHHHHHHHHh--cCCceEEEEecCcc----------------------
Q psy1363 428 KESEAVIGNTK---ILNAHLCMGSQLIFKTVLEYALKYTSAL--RNYFYFAFVWTSSL---------------------- 480 (756)
Q Consensus 428 ~~~e~~~~~~~---~~~~~~C~g~~~~~~~lldy~~~Fi~~~--~~~PfF~~~w~~~~---------------------- 480 (756)
........... ......-......++...+.+..+++.. .++|+|.+.-....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~l~v~~p~~~~~~f~ 263 (528)
T KOG3867|consen 184 GKLKVSAKPFFLREGLHVPHRPGWYSSTGLPTFGACYLMRNHGLSEQPMFLYWAPPAAHKEAMDSPLHVHVPLFTPKTFA 263 (528)
T ss_pred cccCccccchhhhhhcccccccCCccccccccchhhhhhhccCcCCCCceeeccchhhcccccccccccCccccCCcccc
Confidence 00000000000 0000001122233444555555566554 56899887533110
Q ss_pred ----CcccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCC----------CCCCCcCCCccc--cceeEEEE
Q psy1363 481 ----THDYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWG----------DFRETYQGHLEE--RLPFLFFI 544 (756)
Q Consensus 481 ----~Hdy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g----------~~r~t~~G~~E~--rvP~l~I~ 544 (756)
..-|.++|+.||..+|+++++|++.|+++|||||||||||.... +.+..+.+.+|. |+|-+ .+
T Consensus 264 ~~s~~~~y~~~V~~mD~~VG~ildaL~~~gl~nnTiv~FtSDnG~~~~~~~~~~~~n~~~~g~~~~~weggir~~~~-~~ 342 (528)
T KOG3867|consen 264 GRSKRGLYGDMVSEMDWSVGRILDALDDLGLANNTLVIFTSDNGGPLEGGRGNGGSNGPWNGIKKPGWEGGIRVPGL-AR 342 (528)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEeCCCCccccCccccccccCCccceecCCccccCCCcch-hc
Confidence 01267899999999999999999999999999999999998543 233344444553 88877 68
Q ss_pred cCcccccccccccccccccccceeecccHHHHHHHhhCCCCCc
Q psy1363 545 MPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSLK 587 (756)
Q Consensus 545 ~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~~ 587 (756)
||...+++ ++ .+.++|..|+.||+.+++|.+.+.
T Consensus 343 ~p~~~~~g--------~v-~~e~~s~~D~~PTl~~lag~~~p~ 376 (528)
T KOG3867|consen 343 WPGVVPAG--------QV-SNELTSLLDILPTLADLAGGPLPQ 376 (528)
T ss_pred Cccccccc--------ee-ccccccccccchHHHHHcCCCCCc
Confidence 88765432 22 467999999999999999998653
No 8
>PRK12363 phosphoglycerol transferase I; Provisional
Probab=99.86 E-value=2.5e-20 Score=217.24 Aligned_cols=272 Identities=15% Similarity=0.164 Sum_probs=175.2
Q ss_pred CCCCeEEEEEEcCCCchhhh-----hhhhhHHHHHHhhcCcEEeccccc-cC-CCCchhhhhhhcCCCccc-ccc-ccCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNFL-----RQMSRTYKYLDTHYELVDMRGYNK-IG-DNTFPNLVAALTGMSEKE-LEQ-TCYP 372 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~-----R~mPkT~~fL~~~~~~~~f~gyn~-vg-~~T~pnl~aLlTG~~~~~-~~~-~~~~ 372 (756)
+++|||++|.+||+++.-+. ..+|..-++.++ ++.|.+++. .| ..|..++.+.++|.+... .+. ....
T Consensus 154 aKk~NVVvI~LESle~~~id~~~~~~lTPnLd~Lake---gl~FtNfy~~~G~g~Ti~Gl~as~~GlPl~~~~g~~Nt~~ 230 (703)
T PRK12363 154 QKRKNIVWIYGESLERTYFDEDVFPGLMPNLTRLATE---AVDVRNLASTEGSGWTIAGMVASMCGVPLTTAQGDENSMD 230 (703)
T ss_pred cCCCCEEEEEEccCchhhhcCCCCCCcChhHHHHHhC---CeeECCeEeCCCCCcchhhHhHHHhCCCCcCCCCcccccc
Confidence 45799999999999975332 347776555544 678887764 34 458888999899976321 000 0000
Q ss_pred CCCCCCCChhHHHHHHHHCCCeEEeeccCCC-C-CCCC-cCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcc
Q psy1363 373 TPESTFDDCPFLWKNFSAAGFKTLYAEDSFG-M-STFN-YFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQ 449 (756)
Q Consensus 373 ~~~~~ld~~p~Iw~~fk~aGY~T~~~eD~~~-~-g~F~-y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~ 449 (756)
.....+...+.|.+.||++||.|++...... . +.-+ |...||++-- ...++...+. .. ...-.+-.
T Consensus 231 ~~~~f~p~~~~La~ILkq~GY~Taf~hG~~~sF~nrd~fyk~hGFD~f~----d~~~f~~~~~-~~------~~~~~~WG 299 (703)
T PRK12363 231 RMGHFLPEARCLGDYLKDQGYTNHYVGGADASFAGKGKFLSSHGFDEVH----DVNYFLHDKG-VA------PKHFSAWG 299 (703)
T ss_pred cccccCcccchHHHHHHhCCCcEEEEeCCCcCcCchhhHHHhCCCCEEe----echhhccccc-cC------cccCCCCC
Confidence 0112345678999999999999998765431 1 1101 2236776521 1111111000 00 00000112
Q ss_pred hhHHHHHHHHHHHHHHh--cCCceEEEEecCccCccc---------------------CChhHHHHHHHHHHHHHHHhCC
Q psy1363 450 LIFKTVLEYALKYTSAL--RNYFYFAFVWTSSLTHDY---------------------LNLPRLGDSILQKFVKNLNKNG 506 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~~--~~~PfF~~~w~~~~~Hdy---------------------~~~i~~lD~~l~~~L~~L~~~g 506 (756)
...+.+++++.+++++. .++|||.++.+.+.+|.| ++.+.++|+.++++++.|+++|
T Consensus 300 l~Dd~lfd~A~~~Le~Ls~~~qPFfl~llTvsnH~Py~~lp~~~~~~~~~~~~gd~~Yl~tI~ysD~aIG~FId~LKksg 379 (703)
T PRK12363 300 VHDDVLLDDAYDEFETLSRAGQPFMLTTLTMDTHHPAGHLPSACKGQRYDSPLGDIGMLHAIKCSDRLIGQLVDRIRNSR 379 (703)
T ss_pred cccHHHHHHHHHHHHhhhccCCCEEEEeeCCCCCCCcccCchhccccccccccccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34678899999988764 578999998776544432 2367899999999999999999
Q ss_pred CCCCEEEEEEcCCCCCCCCCCCCcCCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 507 HLNRTILILTSDHGLRWGDFRETYQGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 507 lldNTiVIf~SDHG~r~g~~r~t~~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
+++||+|||+||||.......... + .+.|+|++ |++|+.++. + ...+++.|++|++|||++++|++..
T Consensus 380 lydNTIIV~~GDH~~~~~~~~~~L-~-~~kRvP~~-I~ip~gik~---g------~i~~~~gS~iDI~PTLL~LLGi~~~ 447 (703)
T PRK12363 380 YGKNTIIVIASDHLAMPNDLSDVL-T-KQKRENLL-LFLGKDIAP---Q------QVVTRAGTTLDSGATLLQLLEPGMR 447 (703)
T ss_pred CcCCeEEEEEcCCCcccccccccC-C-CCCeEEEE-EEECCcCCC---C------cEECCeeeeeHHHHHHHHHhCCCCC
Confidence 999999999999996543221111 1 23599988 788876542 2 2347899999999999999998632
Q ss_pred chhhhccCCCCCCCCCCCcccCCccCC
Q psy1363 587 KDELLRQDRGPDKDNIPRGISLFRNIP 613 (756)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~g~SLF~~iP 613 (756)
...-|+|||.+-+
T Consensus 448 --------------~~~fG~dLLS~~~ 460 (703)
T PRK12363 448 --------------TLGFGRSLLADDA 460 (703)
T ss_pred --------------CCcCCCcCCCCCC
Confidence 1346778887544
No 9
>PRK03776 phosphoglycerol transferase I; Provisional
Probab=99.84 E-value=6.5e-20 Score=213.98 Aligned_cols=257 Identities=14% Similarity=0.115 Sum_probs=167.8
Q ss_pred CCCCeEEEEEEcCCCchhhhh-----hhhhHHHHHHhhcCcEEecccc--ccCCCCchhhhhhhcCCCccc-cccccCCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNFLR-----QMSRTYKYLDTHYELVDMRGYN--KIGDNTFPNLVAALTGMSEKE-LEQTCYPT 373 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~R-----~mPkT~~fL~~~~~~~~f~gyn--~vg~~T~pnl~aLlTG~~~~~-~~~~~~~~ 373 (756)
++++||++|.++|+++.-+.. .+|...+..++ ++.|.++. ..+..|..+++|.++|.+... ........
T Consensus 159 ~kK~NVViI~LESle~ty~d~~~~~~ltP~LdkLake---gl~FsN~~q~~gt~~Ti~GmfAs~cGlPl~~pf~~n~s~~ 235 (762)
T PRK03776 159 NPKLNLVYIYGESLERTYFDNEAFPGLTPELGALKNE---GLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASAS 235 (762)
T ss_pred CCCCcEEEEEEecCChhhhccCCCCCCChhHHHHHhc---CeeecCceecCCCCccHHHHHHHHcCCCCCCCCCCccccc
Confidence 567999999999999876643 24553334433 78898874 566679999999999985421 11000011
Q ss_pred CCCCCCChhHHHHHHHHCCCeEEeeccCCCC--CCCC-cCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcch
Q psy1363 374 PESTFDDCPFLWKNFSAAGFKTLYAEDSFGM--STFN-YFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQL 450 (756)
Q Consensus 374 ~~~~ld~~p~Iw~~fk~aGY~T~~~eD~~~~--g~F~-y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~ 450 (756)
...++.....|.+.||++||.|.++..|+.. +.-. +...||++- |...-+... .......+ -. ..
T Consensus 236 ~~~f~P~~~cLgdILK~~GY~T~Fi~G~d~~F~n~~~f~~~hGFD~~----yg~~d~~~~---~~~~~~~n---~W--G~ 303 (762)
T PRK03776 236 VSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHL----YGSEELKSV---VADPHYRN---DW--GF 303 (762)
T ss_pred ccccCCccccHHHHHHhCCCceEEEeCCCcCcCchhhhHHhCCCcEE----ecchhcccc---cccccccC---Cc--cc
Confidence 1233456678999999999999999998741 1111 223677642 111111000 00000000 01 23
Q ss_pred hHHHHHHHHHHHHHH--hcCCceEEEEecCccCccc---------------------CChhHHHHHHHHHHHHHHHhCCC
Q psy1363 451 IFKTVLEYALKYTSA--LRNYFYFAFVWTSSLTHDY---------------------LNLPRLGDSILQKFVKNLNKNGH 507 (756)
Q Consensus 451 ~~~~lldy~~~Fi~~--~~~~PfF~~~w~~~~~Hdy---------------------~~~i~~lD~~l~~~L~~L~~~gl 507 (756)
..+.+++++.+++++ ..++|||.++++.+.+|.+ ++.+..+|+.++++++.|+++|+
T Consensus 304 ~Dd~Lfd~A~e~l~eLsk~~kPFfl~llTlstH~P~g~~~~~c~~~~y~~~g~~~~~~~~v~~~D~~iG~fi~~Lk~~g~ 383 (762)
T PRK03776 304 YDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKSYDFDGKPNQSFSAVSCSQENIAALINKIKASPW 383 (762)
T ss_pred CcHHHHHHHHHHHHHhhcCCCCEEEEecCCCCcCCCccCchhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 467888998887765 3578999999887655442 23689999999999999999999
Q ss_pred CCCEEEEEEcCCCCCCCCCCCCcCCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCC
Q psy1363 508 LNRTILILTSDHGLRWGDFRETYQGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSS 585 (756)
Q Consensus 508 ldNTiVIf~SDHG~r~g~~r~t~~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~ 585 (756)
+|||+|||+||||...|.+.....+.-..++|++ |..|+. + + ...+++++++|++||+++++|+++
T Consensus 384 ~dNTiIV~~sDHG~m~g~~~~~l~~~kr~~i~lI-I~~p~~-~---g-------~~~~~~vs~IDI~PTILdlaGi~~ 449 (762)
T PRK03776 384 FKNTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFV-IRGDKP-Q---Q-------ETLAVKRNTMDNGATVLDILGGDN 449 (762)
T ss_pred ccCeEEEEEccCCccccccchhhccCCceeEEEE-EECCCc-C---C-------ceECCceeehhHHHHHHHHhCCCc
Confidence 9999999999999977654321111111245554 676652 1 1 224689999999999999999874
No 10
>KOG3731|consensus
Probab=99.84 E-value=4.7e-20 Score=198.69 Aligned_cols=276 Identities=17% Similarity=0.179 Sum_probs=177.1
Q ss_pred CCCCeEEEEEEcCCC-chhhhhhhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCC------CC
Q psy1363 302 EPEYSVLVVGIDAVS-RQNFLRQMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYP------TP 374 (756)
Q Consensus 302 ~~~pNVliI~iDSlS-r~~f~R~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~------~~ 374 (756)
..+||||+++.|+.- -..-.-.|++|.+.+.+ .|+.+-.+|.+++- |-|++.++|||+++..+...-+. ..
T Consensus 32 ~~~PNvIlvLTDDqD~eLGsm~vm~kt~~~~~d-gg~~Fi~aYvttsl-CcPSRnSiLTGky~hnhhv~tnn~ncss~~W 109 (541)
T KOG3731|consen 32 RLPPNVILVLTDDQDVELGSMAVMFKTLTIMLD-GGAHFISAYVTTSL-CCPSRNSILTGKYVHNHHVYTNNENCSSPSW 109 (541)
T ss_pred CCCCCEEEEEccCcchhcccccccchHHHHHhc-CCceEEecccCccc-cccccchhhhccccccccccccccccCchhH
Confidence 345899999999987 22223469999999998 66666677777665 55999999999999876643221 01
Q ss_pred CCCCCChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCC-----CCCCcchhhhhhhhhcccccccCCcccCCcc
Q psy1363 375 ESTFDDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSP-----TDTFYNIFSKESEAVIGNTKILNAHLCMGSQ 449 (756)
Q Consensus 375 ~~~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p-----~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~ 449 (756)
...-...++.....+++||+|++.|+.-..+.-+|--.|+..+. .-||-.+...... ..+.+.. ....
T Consensus 110 q~~he~~t~~~~l~~~~GYrT~~~GKylney~gsyiPpgW~ew~~l~knskfyNytv~~Ng~-----~~khg~~--y~kd 182 (541)
T KOG3731|consen 110 QADHEKRTFAVYLAIDQGYRTAFFGKYLNEYNGSYIPPGWSEWAGLIKNSKFYNYTVCKNGI-----KEKHGSD--YSKD 182 (541)
T ss_pred hhhhccCchhhhhhhhhceeeecchhhccccCcccCCCCchhhhccccccchhcchhhcCcc-----ccccccc--cchh
Confidence 11123556677777789999999999843221122224444321 1122222111100 0000000 0112
Q ss_pred hhHHHHHHHHHHHHHH----hcCCceEEEEecCcc------------------Ccc------------------------
Q psy1363 450 LIFKTVLEYALKYTSA----LRNYFYFAFVWTSSL------------------THD------------------------ 483 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~----~~~~PfF~~~w~~~~------------------~Hd------------------------ 483 (756)
+..+.+.+....|+.. ++.+|||..+.+... .|.
T Consensus 183 yltDlitn~s~~ff~~s~~~~~~~Pf~l~is~~aPHgped~apQf~~~F~n~~~h~t~s~n~aPnpdk~W~~~~t~pm~~ 262 (541)
T KOG3731|consen 183 YLTDLITNDSLLFFDGSKKRHSQEPFFLAISFPAPHGPEDSAPQFSHLFNNVQFHRTPSYNLAPNPDKHWILRTTGPMSN 262 (541)
T ss_pred hhchhhhhhhHHHHhhccccccCCCeEEEeccCCCCCCCCccHHHHHhccccccccCcccccCCCCccceeeeeccCCCc
Confidence 3445555555566643 346799998754331 111
Q ss_pred ----c--------CChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCC--CcCCCcc--ccceeEEEEcCc
Q psy1363 484 ----Y--------LNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRE--TYQGHLE--ERLPFLFFIMPQ 547 (756)
Q Consensus 484 ----y--------~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~--t~~G~~E--~rvP~l~I~~P~ 547 (756)
+ ......+|+.+.++.+.|.+.|.++||.||.|||||.+.|.+.. .+.--+| .||||+ |+-|+
T Consensus 263 ih~~ft~~l~rkrlQtlqSvd~sve~l~n~l~elgeLdnTyivytsDhGyhlGqfgl~kgks~pyEfdiRVPf~-iRgP~ 341 (541)
T KOG3731|consen 263 IHIPFTNILPRKRLQTLQSVDDSVERLYNLLGELGELDNTYIVYTSDHGYHLGQFGLWKGKSMPYEFDIRVPFL-IRGPG 341 (541)
T ss_pred cccccccchHHHHHHHHHhHHHHHHHHHHHHHHhhcccceEEEEEcCCcccccccccccCCCCceeEeeeeeEE-eeCCC
Confidence 0 12457899999999999999999999999999999999998763 2333355 599999 89886
Q ss_pred ccccccccccccccccccceeecccHHHHHHHhhCCCCCchhhhccCCCCCCCCCCCcccCCcc
Q psy1363 548 TFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSLKDELLRQDRGPDKDNIPRGISLFRN 611 (756)
Q Consensus 548 ~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~~~~~~~~~~~~~~~~~~~g~SLF~~ 611 (756)
.-+.+ -.+.+|..+||+||++||+|++.+ .+..|+||+--
T Consensus 342 v~~~~----------~~~~Iv~niDlaPTilDiAGlp~p--------------~~mdg~sll~l 381 (541)
T KOG3731|consen 342 VAPNK----------TVNEIVLNIDLAPTILDIAGLPKP--------------ACMDGRSLLPL 381 (541)
T ss_pred CCccc----------cchhhheeccccchhhhhcCCCCc--------------ccccccchhhh
Confidence 42221 135789999999999999999854 25567776653
No 11
>PRK09598 lipid A phosphoethanolamine transferase; Reviewed
Probab=99.83 E-value=1.1e-19 Score=208.54 Aligned_cols=237 Identities=16% Similarity=0.186 Sum_probs=172.5
Q ss_pred CCCCeEEEEEEcCCCchhhh-----h-hhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNFL-----R-QMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPE 375 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~-----R-~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~ 375 (756)
.+++||++|..||++++++. | +.|..-+.+++ +++.|.+..+.|..|.+++..+|||.......
T Consensus 221 ~~~~~vVlViGES~R~d~~slyGY~r~TTP~L~~~la~--~~~~f~n~~S~gt~T~~Slp~mls~~~~~~~~-------- 290 (522)
T PRK09598 221 HSKSVVVLVIGESARKHNYALYGYEKPTNPRLSKRLAT--HELTLFNATSCATYTTASLECILDSSFKNTSN-------- 290 (522)
T ss_pred CCCCEEEEEEECCccHhhcccCCCCCCCChhhhhhccc--CceEEcceeeCCCCHHHHHHHHccCCCccccc--------
Confidence 56789999999999999984 3 56776554433 56888888999999999999999997764321
Q ss_pred CCCCChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCc-chhhhhhhhhcccccccCCcccCCcc-hhHH
Q psy1363 376 STFDDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFY-NIFSKESEAVIGNTKILNAHLCMGSQ-LIFK 453 (756)
Q Consensus 376 ~~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~-rp~~~~~e~~~~~~~~~~~~~C~g~~-~~~~ 453 (756)
..+.+.+.+|++||+|.+.+.++ |... .++ +.+. +..+ ...|.+.. ...+
T Consensus 291 ----~~~nl~~ilk~aGy~T~W~snq~--g~~~---~~~-----~~~~~~~~~--------------~~~~~~~~~~~De 342 (522)
T PRK09598 291 ----AYENLPTYLTRAGIKVFWRSAND--GEPN---VKV-----TSYLKNYEL--------------IQKCPNCEAPYDE 342 (522)
T ss_pred ----ccCCHHHHHHHCCCeEEEEECCC--CCCC---ccc-----eeeccchhc--------------cccCCCCCCCCHH
Confidence 22568899999999999988874 2100 111 1110 0000 01132222 2468
Q ss_pred HHHHHHHHHHHHhcCCceEEEEecCccCcc----------------------------------cCChhHHHHHHHHHHH
Q psy1363 454 TVLEYALKYTSALRNYFYFAFVWTSSLTHD----------------------------------YLNLPRLGDSILQKFV 499 (756)
Q Consensus 454 ~lldy~~~Fi~~~~~~PfF~~~w~~~~~Hd----------------------------------y~~~i~~lD~~l~~~L 499 (756)
.+++.+.+++++.+++|+|.+++... +|. |.|.+.+.|..+++++
T Consensus 343 ~LL~~l~~~l~~~~~~p~fivlH~~G-SH~P~Y~~RyP~~f~~F~p~~~~~~l~~~~~~~~~n~YdnsI~ytD~~l~~ii 421 (522)
T PRK09598 343 SLLYNLPELIKASSNENVLLILHLAG-SHGPNYDNKYPLNFRVFKPVCSSVELSSCSKESLINAYDNTIFYNDYLLDKII 421 (522)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEeCcC-CCCCcccccCChhhcccCCCCcchhhhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999998665679999887653 331 4568899999999999
Q ss_pred HHHHhCCCCCCEEEEEEcCCCCCCCCCCCCcCC-----Ccc--ccceeEEEEcCcccccccccccccccccccceeeccc
Q psy1363 500 KNLNKNGHLNRTILILTSDHGLRWGDFRETYQG-----HLE--ERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYD 572 (756)
Q Consensus 500 ~~L~~~glldNTiVIf~SDHG~r~g~~r~t~~G-----~~E--~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~D 572 (756)
+.|++.+. ||+||++||||...|++.....| ..| .|+||+ ||+|+.+++++|. ...++.+||.|
T Consensus 422 ~~Lk~~~~--~t~iIy~SDHGe~lge~g~~~hg~p~~~~~~~~~~VP~i-i~~s~~~~~~~~~------~~~~~~~S~dd 492 (522)
T PRK09598 422 SMLKNLKQ--PALMIYLSDHGESLGEGAFYLHGIPKSIAPKEQYEIPFI-VWASDSFKKQHSI------IQTQTPINQNV 492 (522)
T ss_pred HHHHhCCC--CeEEEEEccCccccccCCcccCCCCcCCCccccccccEE-EEEChhhhhhchh------hhcCCCchHHH
Confidence 99999876 99999999999998875421112 122 499999 8999988876654 23467999999
Q ss_pred HHHHHHHhhCCCCC
Q psy1363 573 LHETFKDLIDVSSL 586 (756)
Q Consensus 573 l~~TL~~llg~~~~ 586 (756)
|++|+++++|++.+
T Consensus 493 if~TlL~l~gv~t~ 506 (522)
T PRK09598 493 IFHSVLGVFDFKNP 506 (522)
T ss_pred HHHHHHHHcCCCCc
Confidence 99999999999864
No 12
>PRK10649 hypothetical protein; Provisional
Probab=99.82 E-value=1.8e-19 Score=209.65 Aligned_cols=268 Identities=18% Similarity=0.147 Sum_probs=176.2
Q ss_pred CCCCeEEEEEEcCCCchhhhh------hhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNFLR------QMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPE 375 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~R------~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~ 375 (756)
.++.||++|..||.++.++.- +.|..-+..++..+.+.|.++.+.|+.|.+++..+||.....+.
T Consensus 234 ~~p~niVlVIGES~r~d~~slyGY~r~TTP~Ld~l~~~~~~~~~F~n~~S~~~~T~~Sl~~~LS~~~~~~~--------- 304 (577)
T PRK10649 234 NAPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLTVFNNVVTSRPYTIEILQQALTFADEKNP--------- 304 (577)
T ss_pred CCCCeEEEEEEeccCHhhccccCCCCCCChhHHhhhccCCCeEEeCceecCCcCHHHHHHHHccCCcccch---------
Confidence 345599999999999998843 35654333331125789999999999999999999985432111
Q ss_pred CCCCChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHH
Q psy1363 376 STFDDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTV 455 (756)
Q Consensus 376 ~~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~l 455 (756)
......+.|.+.+|++||.|.+.+.++..+..+-....+... .| .+++. +...|.+.....+.+
T Consensus 305 ~~~~~~~~l~~llk~aGY~T~wisNq~~~~~~~~~~~~~~~~-~d---~~~f~------------~~~~~~~~~~~D~~L 368 (577)
T PRK10649 305 DLYLTQPSLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSRQ-TD---KQYYM------------NQQRTQNAREYDTNV 368 (577)
T ss_pred hhhccCCCHHHHHHHCCCeEEEEeCCccccccchhhhHhhhh-cc---chhhc------------cccccCCCCCcHHHH
Confidence 011245679999999999999998876433211000001100 00 01100 111232223335667
Q ss_pred HHHHHHHHHHhcCCceEEEEecCccCc---------------------------------ccCChhHHHHHHHHHHHHHH
Q psy1363 456 LEYALKYTSALRNYFYFAFVWTSSLTH---------------------------------DYLNLPRLGDSILQKFVKNL 502 (756)
Q Consensus 456 ldy~~~Fi~~~~~~PfF~~~w~~~~~H---------------------------------dy~~~i~~lD~~l~~~L~~L 502 (756)
++...++++. .++|+|.+++....++ .|.|.+.+.|..++++++.|
T Consensus 369 L~~l~~~L~~-~~~~~fivlHl~GsH~~Y~~RyP~~~~~F~~~~~~~~~~~~~~~~~~~~~Y~nsI~y~D~~l~~ii~~L 447 (577)
T PRK10649 369 LKPFSEVLAD-PAPKKFIIVHLLGTHIKYKYRYPENQGKFDDRTGHVPPGLNADELESYNDYDNANLYNDHVVASLIKDF 447 (577)
T ss_pred HHHHHHHHhc-cCCCcEEEEEecCCCcchhhhCCHHHhcCCCCCCcccccccchHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 7777777753 3557777775542111 26788999999999999999
Q ss_pred HhCCCCCCEEEEEEcCCCCCCC---CCC--C-CcCCCcc--ccceeEEEEcCcccccccccccccccccccceeecccHH
Q psy1363 503 NKNGHLNRTILILTSDHGLRWG---DFR--E-TYQGHLE--ERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLH 574 (756)
Q Consensus 503 ~~~glldNTiVIf~SDHG~r~g---~~r--~-t~~G~~E--~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~ 574 (756)
++. .+||+||++||||...+ ++. + .....++ .|+||+ ||+|+.+++++|.. ++...++++|+.|+.
T Consensus 448 k~~--~~nt~iiy~SDHGe~~~~~~~~~~lG~~~~~~~~~~~~VP~i-i~~s~~~~~~~~~~---~~~~~~~~~s~~Dl~ 521 (577)
T PRK10649 448 KAT--DPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFL-LWTSEKWQAAHPRD---FSQDVDRKYSLAELI 521 (577)
T ss_pred hcC--CCCeEEEEECCCCcccccCCcccccCCCCCCCCcccceecEE-EEECHHHHhhCchh---hhhhhcCCeeHHhHH
Confidence 987 49999999999999753 211 1 1111223 499999 89988777666642 223467899999999
Q ss_pred HHHHHhhCCCCCchhhhccCCCCCCCCCCCcccCCccCCCC
Q psy1363 575 ETFKDLIDVSSLKDELLRQDRGPDKDNIPRGISLFRNIPDT 615 (756)
Q Consensus 575 ~TL~~llg~~~~~~~~~~~~~~~~~~~~~~g~SLF~~iP~~ 615 (756)
+|+++++|++.+ .+..|.|||.+....
T Consensus 522 ~Tll~laGi~~~--------------~~~~~~sl~~~~~~~ 548 (577)
T PRK10649 522 HTWSDLAGLSYD--------------GYDPTRSLVNPQFKE 548 (577)
T ss_pred HHHHHHcCCCCC--------------cCCcccCccchhccc
Confidence 999999999853 245788998876543
No 13
>PRK11598 putative metal dependent hydrolase; Provisional
Probab=99.81 E-value=5.4e-19 Score=203.51 Aligned_cols=264 Identities=17% Similarity=0.193 Sum_probs=180.5
Q ss_pred CCCe-EEEEEEcCCCchhhhhh--hhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCCCCCC
Q psy1363 303 PEYS-VLVVGIDAVSRQNFLRQ--MSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPESTFD 379 (756)
Q Consensus 303 ~~pN-VliI~iDSlSr~~f~R~--mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~~~ld 379 (756)
.+|| |++|.-||.+++++.-. -..|..+|++ .+.+.|+++.+.|..|.+++..+|+|........... .
T Consensus 232 ~~~~~vVlViGESaR~~~~slyGY~r~TtP~L~~-~~~~~F~~~~S~gt~T~~Svp~mfS~~~~~~y~~~~~-------~ 303 (545)
T PRK11598 232 KRKNLTILVVGETSRAENFSLGGYPRETNPRLAK-DNVIYFPHTTSCGTATAVSVPCMFSNMPRKHYDEELA-------H 303 (545)
T ss_pred CCCcEEEEEehhhHHHhhcCCCCCCCCCCccccc-cCceeecccccCccchHHHHHHHhcccccccccchhh-------h
Confidence 3555 66778888999888432 1123334566 6788899999999999999999999987654432211 1
Q ss_pred ChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHHH
Q psy1363 380 DCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEYA 459 (756)
Q Consensus 380 ~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy~ 459 (756)
..+.|.+.++++||.|.+.+.. .|+... .|.. |. ..... . ..+..|.++....+.+++..
T Consensus 304 ~~~~l~d~l~~aG~~t~W~~Nq----------~g~~g~-~~r~--~~-~~~~~----~--~~~~~~~~~~~~De~LL~~l 363 (545)
T PRK11598 304 HQEGLLDIIQRAGINVLWNDND----------GGCKGA-CDRV--PH-QDVTA----L--NLPGQCIDGECYDEVLFHGL 363 (545)
T ss_pred hcccHHHHHHHcCCeEEeecCC----------CCCcch-hccc--ch-hhhhh----h--ccccccCCCCccHHHHHHHH
Confidence 2357999999999999776432 122111 1100 00 00000 0 01234666556678999999
Q ss_pred HHHHHHhcCCceEEEEecCccCcc----------------------------------cCChhHHHHHHHHHHHHHHHhC
Q psy1363 460 LKYTSALRNYFYFAFVWTSSLTHD----------------------------------YLNLPRLGDSILQKFVKNLNKN 505 (756)
Q Consensus 460 ~~Fi~~~~~~PfF~~~w~~~~~Hd----------------------------------y~~~i~~lD~~l~~~L~~L~~~ 505 (756)
.++++.. ++++|.+++... +|. |.|.+.++|..++++++.|++.
T Consensus 364 ~~~L~~~-~~~~fivLH~~G-SH~P~Y~~RyP~~~~~F~p~~~~~~~~~~~~~~~~n~YdnsI~ytD~~lg~ii~~Lk~~ 441 (545)
T PRK11598 364 ENYINNL-QGDGVIVLHTIG-SHGPTYYNRYPPQFRKFTPTCDTNEIQTCTQQQLVNTYDNTILYVDYIVDKAINLLKQH 441 (545)
T ss_pred HHHHHhc-CCCeEEEEeCCC-CCCcchhhcCChhhccCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998764 445777776553 342 4678999999999999999999
Q ss_pred CCCCCEEEEEEcCCCCCCCCCCCCcCCC-------ccccceeEEEEcCccccccccccccccccc-ccceeecccHHHHH
Q psy1363 506 GHLNRTILILTSDHGLRWGDFRETYQGH-------LEERLPFLFFIMPQTFKTKYRVAYSNLLYN-QHRLTTPYDLHETF 577 (756)
Q Consensus 506 glldNTiVIf~SDHG~r~g~~r~t~~G~-------~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N-~~rL~S~~Dl~~TL 577 (756)
|..+||+||++||||...|++.....|. .+.|+||+ ||+|+.++++++...+.|+.+ .++++|+.|+.+|+
T Consensus 442 ~~~~nT~iIy~SDHGe~lge~g~~~hg~~y~~aP~~~~~VPli-iw~s~~~~~~~~~~~~~l~~~~~~~~~s~ddl~~Tl 520 (545)
T PRK11598 442 QDKFNTSLVYLSDHGESLGENGIYLHGLPYAIAPDQQTHVPML-LWLSPDYQKRYGVDQQCLQKQAQTQDYSQDNLFSTL 520 (545)
T ss_pred CCcCCeEEEEECcCCCccccCCcccCCCccccCccccccccEE-EEECcchhccccchhhhhhhhccCCceeHHhHHHHH
Confidence 9999999999999999988754211121 12499999 899988776655433334332 35699999999999
Q ss_pred HHhhCCCCCchhhhccCCCCCCCCCCCcccCCcc
Q psy1363 578 KDLIDVSSLKDELLRQDRGPDKDNIPRGISLFRN 611 (756)
Q Consensus 578 ~~llg~~~~~~~~~~~~~~~~~~~~~~g~SLF~~ 611 (756)
++++|++.+. +..|.|+|.+
T Consensus 521 L~l~gI~t~~--------------y~~~~di~~~ 540 (545)
T PRK11598 521 LGLTGVQTKE--------------YQAADDILQP 540 (545)
T ss_pred HHHhCCCCCC--------------CCCCCCcccc
Confidence 9999998532 4467777764
No 14
>PRK11560 phosphoethanolamine transferase; Provisional
Probab=99.80 E-value=2.1e-18 Score=198.82 Aligned_cols=248 Identities=14% Similarity=0.114 Sum_probs=165.1
Q ss_pred CCCCeEEEEEEcCCCchhh-----hh-hhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNF-----LR-QMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPE 375 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f-----~R-~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~ 375 (756)
.+++||++|+-+|.+++++ .| ++|.+.+ + .+.+.|++ .+.|..|..++..||++....+.....
T Consensus 245 ~~~~~vVlViGESaRad~~slyGY~r~TtP~L~~---~-~~~~~f~~-~S~gt~T~~Slp~mfs~~~~~~~~~~~----- 314 (558)
T PRK11560 245 VDDTYVVFIIGETTRWDHMGILGYERNTTPKLAQ---E-KNLAAFRG-YSCDTATKLSLRCMFVREGGAEDNPQR----- 314 (558)
T ss_pred CCCCEEEEEEEcccCHhhcccCCCCCCCCcchHh---c-CCEEEecC-ccCCccchhhhHHHhcCCCccccchhh-----
Confidence 3567999999999999999 33 6777643 2 45677887 578999999999999997764322110
Q ss_pred CCCCChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHH
Q psy1363 376 STFDDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTV 455 (756)
Q Consensus 376 ~~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~l 455 (756)
....+.+.+.+|++||.|.+...-...+..+ +.|.++.+. .... . . ...|.|+....+.+
T Consensus 315 --~~~~~nlld~l~~aGy~t~w~SnQ~~~w~~n--~~~~~~~~~--------~~~~---~-~----~~~~~g~~~~D~~L 374 (558)
T PRK11560 315 --TLKEQNVFAVLKQLGFSSELFAMQSEMWFYN--NTMADNYAY--------REQI---G-A----EPRNRGKPVDDMLL 374 (558)
T ss_pred --hcccCCHHHHHHHCCCcEEEeecccceeeec--Ccccccchh--------hhhc---c-c----ccCCCCCCcChHHH
Confidence 0134679999999999998876433222222 223222110 0000 0 0 01122222335678
Q ss_pred HHHHHHHHHHhcCCceEEEEecCccCc--------------------------------ccCChhHHHHHHHHHHHHHHH
Q psy1363 456 LEYALKYTSALRNYFYFAFVWTSSLTH--------------------------------DYLNLPRLGDSILQKFVKNLN 503 (756)
Q Consensus 456 ldy~~~Fi~~~~~~PfF~~~w~~~~~H--------------------------------dy~~~i~~lD~~l~~~L~~L~ 503 (756)
++.+.++++..+++++|.+++.. .+| .|.|.+.++|..++++++.|+
T Consensus 375 L~~l~~~L~~~~~~~~~ivLH~~-GSH~~Y~~RyP~~f~~F~p~~~~~~~~c~~~~~~n~YdnsI~ytD~~lg~ii~~Lk 453 (558)
T PRK11560 375 VDEMKQSLGRNPDGKHLIILHTK-GSHYNYTQRYPRSFARYQPECIGVDSGCSKAQLINSYDNSVLYVDHFISSVIDQLR 453 (558)
T ss_pred HHHHHHHHHhcCCCCeEEEEecc-CCCcChhhcCCHhhhccCCcCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888765444455566443 233 157789999999999999998
Q ss_pred hCCCCCCEEEEEEcCCCCCCCCCCC---CcCCCc---cccceeEEEEcCccccccccc---ccccccccc--cceeeccc
Q psy1363 504 KNGHLNRTILILTSDHGLRWGDFRE---TYQGHL---EERLPFLFFIMPQTFKTKYRV---AYSNLLYNQ--HRLTTPYD 572 (756)
Q Consensus 504 ~~glldNTiVIf~SDHG~r~g~~r~---t~~G~~---E~rvP~l~I~~P~~~r~~~P~---~~~nL~~N~--~rL~S~~D 572 (756)
+ +||+||++||||..+|+.+. .+.... ..|+||+ ||+|+.++++ |+ ..+.++.++ +.++||.|
T Consensus 454 ~----~nTivIy~SDHGe~lge~~~lhg~~~~~~~~~~~~VPli-v~~s~~~~~~-p~~~~~~~~l~~~~~~~~~~s~~d 527 (558)
T PRK11560 454 D----KKAIVFYAADHGESINEREHLHGTPREMAPPEQFRVPMM-VWMSDKYLAN-PDNAQAFAQLKKQADMKVPRRHVE 527 (558)
T ss_pred h----cCeEEEEEcCCCCcCCCCcccCCCCcccCCccCeeeCEE-EEEccccccC-CccchhHHHhccccccCCceeehh
Confidence 7 69999999999998876431 111111 2499999 8999988764 54 222233332 67899999
Q ss_pred HHHHHHHhhCCCCC
Q psy1363 573 LHETFKDLIDVSSL 586 (756)
Q Consensus 573 l~~TL~~llg~~~~ 586 (756)
|+|||++++|++.+
T Consensus 528 lf~TlL~~~gv~~p 541 (558)
T PRK11560 528 LFDTILGCLGYTSP 541 (558)
T ss_pred HHHHHHHHcCCCCC
Confidence 99999999999853
No 15
>COG1368 MdoB Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]
Probab=99.25 E-value=5.8e-11 Score=141.10 Aligned_cols=251 Identities=20% Similarity=0.248 Sum_probs=150.7
Q ss_pred CCCCeEEEEEEcCCCchhhhh------hhhhHHHHHHhhcCcEEecccc-ccCC-CCchhhhhhhcCCCccccccccCCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNFLR------QMSRTYKYLDTHYELVDMRGYN-KIGD-NTFPNLVAALTGMSEKELEQTCYPT 373 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~R------~mPkT~~fL~~~~~~~~f~gyn-~vg~-~T~pnl~aLlTG~~~~~~~~~~~~~ 373 (756)
.+.||||+|.+.|........ -+|..-+..++.. +..|.+|. .++- .|+...+.+.+-.++...+.. ..
T Consensus 259 ~~~~nvIvi~lES~~~~~~~~~~~g~~vtP~ln~l~~~~~-s~~f~~ff~~~~~~~~~~ae~~~~~s~~~~~~~~~-~~- 335 (650)
T COG1368 259 AKGPNVIVIQLESFQGFLINPKVNGIEVTPNLNKLQKGGV-SLLFSNFFGGVTAGSTFDAETGVLSSLFPAARGSV-FQ- 335 (650)
T ss_pred cCCCcEEEEEeccccchheeccccCCCCCCcHHHHhccCc-hhHHHHHHhhcCCCCcccchhhhccCCCCCccCce-ee-
Confidence 667999999999988654422 3666544444411 35554443 3333 232222222211111111111 00
Q ss_pred CCCCCCChhHHHHHHHHCCCeEEeeccCCCCCCCC----cCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcc
Q psy1363 374 PESTFDDCPFLWKNFSAAGFKTLYAEDSFGMSTFN----YFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQ 449 (756)
Q Consensus 374 ~~~~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~----y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~ 449 (756)
. ......+.+++.+|++||.|+..-.... +-+| |...||++- +.+..+...+ ..-.+-.
T Consensus 336 ~-~~~~~~~slp~iLk~~GY~t~a~hg~~~-~fwNr~~~yk~~Gfd~f----~~~~~~~~~~-----------~~~~~~G 398 (650)
T COG1368 336 T-YGDNKYSSLPAILKQQGYKTAALHGGDG-SFWNRKSFYKIFGFDDF----FDLESFDGNA-----------DSEIGWG 398 (650)
T ss_pred e-cCCCCcccHHHHHhcCCceEEEEeCCCc-ceecHHHHHHhcChhhc----cchhhcCCCc-----------ccccCCC
Confidence 0 0112368999999999999997644431 1111 333566541 1111111100 0001112
Q ss_pred hhHHHHHHHHHHHHHHhcCCceEEEEecCccCc-------------------------ccCChhHHHHHHHHHHHHHHHh
Q psy1363 450 LIFKTVLEYALKYTSALRNYFYFAFVWTSSLTH-------------------------DYLNLPRLGDSILQKFVKNLNK 504 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~~~H-------------------------dy~~~i~~lD~~l~~~L~~L~~ 504 (756)
...+.+++.+...++.. ++|+|+++-+.+ .| +|.+.+.+.|+.++++++.+++
T Consensus 399 ~sD~~l~~~~~~~l~~~-~~Pfy~~~iTls-nH~Pf~~~~~~~~~~~~~~~~~~~~l~~y~~~~~y~D~al~~F~~~lkk 476 (650)
T COG1368 399 LSDKDLFKESLPLLKKL-KKPFFSFVITLS-NHGPFELPEGKRNELLEEPLSASTALANYLQAVHYADEALGQFIDKLKK 476 (650)
T ss_pred CchHHHHHHHHHHHHhc-CCChHheEEecc-CCCCCCCChhhhcccccccCcCcccccchhhhhhhHHHHHHHHHHHHHh
Confidence 34567778888877764 449999876544 33 2456789999999999999999
Q ss_pred CCCCCCEEEEEEcCCCCCCCCCCC---CcCCC-cc----ccceeEEEEcCcccccccccccccccccccceeecccHHHH
Q psy1363 505 NGHLNRTILILTSDHGLRWGDFRE---TYQGH-LE----ERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHET 576 (756)
Q Consensus 505 ~glldNTiVIf~SDHG~r~g~~r~---t~~G~-~E----~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~T 576 (756)
+|+++||++++.+||+.+.+.... ...|. ++ .|+|++ |+.|+.=. + ....+..+++|++||
T Consensus 477 ~~~~~~sviv~~GDH~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~-i~~~g~~~---~-------~~~~~~~~qidi~pT 545 (650)
T COG1368 477 SGLYKNSVIVLYGDHYGISGNQNLAMPKFLGKSYDIDMLQRVPLL-IHAPGIKN---K-------KKIDTVGGQLDIAPT 545 (650)
T ss_pred cCCCCCcEEEEECCCCCcchhhhhhhhhhcccccchhHHhcCCeE-EEcCCCCc---c-------ccccccccccchhhH
Confidence 999999999999999998875432 12232 11 279999 78887511 1 234689999999999
Q ss_pred HHHhhCCCC
Q psy1363 577 FKDLIDVSS 585 (756)
Q Consensus 577 L~~llg~~~ 585 (756)
+++++|+++
T Consensus 546 il~l~gi~~ 554 (650)
T COG1368 546 ILGLLGIST 554 (650)
T ss_pred HHHHcCCCC
Confidence 999999984
No 16
>COG2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
Probab=99.25 E-value=5.1e-11 Score=137.45 Aligned_cols=254 Identities=18% Similarity=0.179 Sum_probs=171.7
Q ss_pred CCCeEEEEEEcCCCchhhhhh--hhhHHHHHHhhcC-cEEeccccccCCCCchhhhhhhcCCCccccccccCCCCCCCCC
Q psy1363 303 PEYSVLVVGIDAVSRQNFLRQ--MSRTYKYLDTHYE-LVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPESTFD 379 (756)
Q Consensus 303 ~~pNVliI~iDSlSr~~f~R~--mPkT~~fL~~~~~-~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~~~ld 379 (756)
++-++++|.=+|.+++++.-. --.|..+|++..+ -+.|.+..+.|..|..++-.+|+=...++..... ..
T Consensus 230 ~~~~~VLVIGESaR~~n~~L~GY~R~TtP~L~~~~~~~~~f~~~~Scgt~Ta~Slpcmfs~~~r~~~~~~~-------~~ 302 (555)
T COG2194 230 KPRTVVLVIGESARRDNMSLYGYPRETTPFLAKLRGPLTVFFNAYSCGTATALSLPCMFSRDPRENYSEQK-------AL 302 (555)
T ss_pred CCcEEEEEEechhhHhhccccCCCCCCChhHHhccCCceeeccccccccceeeeehhhcccCchhcccccc-------cc
Confidence 455788888899999998431 1123335555222 5889999999999999999998876555432211 13
Q ss_pred ChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHHH
Q psy1363 380 DCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEYA 459 (756)
Q Consensus 380 ~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy~ 459 (756)
..+.+...+|+|||.|.+.+... .+. |.- +. -|+-....... . ..+ +|.++....+.++...
T Consensus 303 ~~~Nl~dilkrAG~~t~W~~nq~-~~k------~~~----~~--~~~~~~~d~~~--~--~~~-~~~~~~~~De~LL~~~ 364 (555)
T COG2194 303 HQDNLLDLLKRAGYKTFWISNQT-GCK------GVT----DR--IPIANRADENY--F--LKG-YCNGGNCYDEALLPDL 364 (555)
T ss_pred ccccHHHHHHHcCCeEEeeccCc-ccc------cch----hh--chhhhhhhhhc--c--ccc-cccCcccchHHHhHhH
Confidence 45779999999999999887762 221 111 10 01111111100 0 012 6877777788888888
Q ss_pred HHHHHHhcCCceEEEEecCccCc---------------------------------ccCChhHHHHHHHHHHHHHHHhCC
Q psy1363 460 LKYTSALRNYFYFAFVWTSSLTH---------------------------------DYLNLPRLGDSILQKFVKNLNKNG 506 (756)
Q Consensus 460 ~~Fi~~~~~~PfF~~~w~~~~~H---------------------------------dy~~~i~~lD~~l~~~L~~L~~~g 506 (756)
.+.+....+.+.|..++.. .+| .|-|.+.+.|.-+.++++.|++++
T Consensus 365 ~~~l~~~~~~~~~IVLH~~-GSHp~Y~~Ryp~~~~kF~p~c~~~~~~~c~~~~lvN~YDNtilYtD~~L~~vi~~Lk~~~ 443 (555)
T COG2194 365 DQVLAQELSQKKLIVLHLM-GSHPNYYDRYPKEFAKFTPTCDTNDISSCSQEQLVNCYDNTILYTDYFLSKLIDQLKDKK 443 (555)
T ss_pred HHHhhccCCCCeEEEEEcc-CCCccHhhhCCHHHhccCCCCCccccccCcHHHHHHhhhchhhhhHHHHHHHHHHHHhCC
Confidence 8888753444567766553 344 267889999999999999999987
Q ss_pred CCCCEEEEEEcCCCCCCCCCCCCcCC-Cc------cccceeEEEEcCccccccccc--ccccccccccce-eecccHHHH
Q psy1363 507 HLNRTILILTSDHGLRWGDFRETYQG-HL------EERLPFLFFIMPQTFKTKYRV--AYSNLLYNQHRL-TTPYDLHET 576 (756)
Q Consensus 507 lldNTiVIf~SDHG~r~g~~r~t~~G-~~------E~rvP~l~I~~P~~~r~~~P~--~~~nL~~N~~rL-~S~~Dl~~T 576 (756)
- +|.+|++||||+..|+.+....| .+ ..+|||| +|..+.+.+++|. ...-++...+.+ .+|-++..|
T Consensus 444 ~--~~~liY~SDHGEslgEn~~ylhg~p~~~ap~~q~~VP~i-~w~S~~~~~~~~~~~~~~c~~~~~~~~~~~~d~lf~s 520 (555)
T COG2194 444 D--NTSLIYFSDHGESLGENGPYLHGTPYEIAPQEQYHVPFI-VWSSDKFQQKHPRQKDLRCLNYFAQELSYSHDNLFHS 520 (555)
T ss_pred C--CeEEEEEcCccHhhccCCcccccCcccCCchhheeeeEE-EEEChHHHhhhhhhhHHHHHHHhhhccchhHHHhHhh
Confidence 5 99999999999988765432222 21 2499999 8999999998883 222244444445 589999999
Q ss_pred HHHhhCCCC
Q psy1363 577 FKDLIDVSS 585 (756)
Q Consensus 577 L~~llg~~~ 585 (756)
++.+++...
T Consensus 521 ~lg~~~~~~ 529 (555)
T COG2194 521 LLGVSGVKT 529 (555)
T ss_pred ccCcccccc
Confidence 999888764
No 17
>PRK05362 phosphopentomutase; Provisional
Probab=99.06 E-value=2.6e-09 Score=118.61 Aligned_cols=152 Identities=18% Similarity=0.173 Sum_probs=105.3
Q ss_pred ChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHHH
Q psy1363 380 DCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEYA 459 (756)
Q Consensus 380 ~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy~ 459 (756)
..+++++.++++||.|..+|+.. ..|. ..|+.+.- . .......++.+
T Consensus 222 ~~~Tl~d~L~~aG~~v~~VGki~--DiFa--~~G~t~~~----------~-------------------~~~~~~~~~~a 268 (394)
T PRK05362 222 PAPTVLDKLKEAGGEVIAVGKIA--DIFA--GQGITEKV----------K-------------------TKSNMDGMDAT 268 (394)
T ss_pred CCCCHHHHHHHCCCeEEEEEehh--hccc--CCCccccc----------C-------------------CCCHHHHHHHH
Confidence 47899999999999999999853 2232 23433210 0 00123455666
Q ss_pred HHHHHHhcCCceEEEEecCcc----Ccc-----cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCc
Q psy1363 460 LKYTSALRNYFYFAFVWTSSL----THD-----YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETY 530 (756)
Q Consensus 460 ~~Fi~~~~~~PfF~~~w~~~~----~Hd-----y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~ 530 (756)
.+.++. +++|.|.|+.+..+ .|. |...+..+|..++++++.|+ +||+||+|||||...+...
T Consensus 269 le~L~~-~~~~~fvfvn~~~~D~~~GH~~~~~~y~~ale~~D~~lg~ll~~L~-----~~tlliiTaDHG~d~t~~g--- 339 (394)
T PRK05362 269 IEEMKE-AGDNGLVFTNLVDFDSLYGHRRDVAGYAAALEEFDARLPELLAALK-----EDDLLIITADHGNDPTWPG--- 339 (394)
T ss_pred HHHHHh-CCCCcEEEEecccCccccCCcCCHHHHHHHHHHHHHHHHHHHHHhc-----cCCEEEEeCCCCCCCCCCC---
Confidence 666653 35688888866543 352 67889999999999999986 4899999999997432211
Q ss_pred CCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCC
Q psy1363 531 QGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSS 585 (756)
Q Consensus 531 ~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~ 585 (756)
.....+++|++ |++|+. + + .+...++|..||.||+++++|++.
T Consensus 340 t~HT~e~VPlI-i~gp~v-~---~-------~~l~~~~sl~DI~pTia~l~Gv~~ 382 (394)
T PRK05362 340 TDHTREYVPLL-VYGPKF-K---G-------GSLGHRETFADIGATIADNFGVEP 382 (394)
T ss_pred CCCCCCceeEE-EEECCC-C---c-------cEECCCCEehhHHHHHHHHcCcCC
Confidence 12335799999 788873 2 1 123567899999999999999874
No 18
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=99.00 E-value=5.1e-09 Score=119.07 Aligned_cols=179 Identities=18% Similarity=0.171 Sum_probs=110.3
Q ss_pred ChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHHH
Q psy1363 380 DCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEYA 459 (756)
Q Consensus 380 ~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy~ 459 (756)
-..+|-+.+.++|.+..-+-.....+--+|-..|=.+.|.+---|-+ +. ..+ ...+=..+......+.+.+
T Consensus 303 ~~n~lge~ls~~g~~qlriaETeKyaHVTfFfnGg~e~~f~ge~r~l-------v~-sp~-v~tyd~~PeMsa~evtd~~ 373 (501)
T TIGR01307 303 LTNTLGEVLAKHDLTQLRIAETEKYAHVTFFFNGGVEVPFAGETRTL-------IP-SPK-VATYDLQPEMSAKAVTDAV 373 (501)
T ss_pred CCCCHHHHHHHCCCcEEEEeeccccceeeeeecCCccccCCCceeEE-------eC-CCC-CCccccCCccCHHHHHHHH
Confidence 45689999999998876543333333222222233333322111110 00 000 0112223456677888999
Q ss_pred HHHHHHhcCCceEEEEecCcc---Cc-----ccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCC--CCC-CCC
Q psy1363 460 LKYTSALRNYFYFAFVWTSSL---TH-----DYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLR--WGD-FRE 528 (756)
Q Consensus 460 ~~Fi~~~~~~PfF~~~w~~~~---~H-----dy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r--~g~-~r~ 528 (756)
.+++++ ++|.|.++.+... .| .+...+..+|+.++++++.|++.|. +||||||||.. ++. ...
T Consensus 374 i~~I~~--~k~dfi~vnfan~DmvGHtg~~~a~v~AIE~vD~~LGrIl~aLke~G~----~VIiTADHGnae~m~d~~g~ 447 (501)
T TIGR01307 374 LEAIAQ--GKFDLIVVNFANPDMVGHTGNFEAAIKAVEALDVCLGRIVEACKKVGG----TLFLTADHGNAEEMIDENGN 447 (501)
T ss_pred HHHHhc--cCCCEEEEECCCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEEcCCCChhhccCCCCC
Confidence 988864 6799998866432 34 2567899999999999999999876 69999999962 211 110
Q ss_pred CcCCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 529 TYQGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 529 t~~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
......-.+||++ |++|+.++. .+...+..||+||+++++|++.|
T Consensus 448 p~t~HT~~~VP~I-i~~p~~i~~------------~~~~~sL~DIaPTiLdL~Gi~~P 492 (501)
T TIGR01307 448 PHTAHTTNPVPFV-CVGAKNVKL------------IREGGVLADIAPTILDLMGLEQP 492 (501)
T ss_pred cccCCCCeEeeEE-EEECCcccc------------cCCCceEhHHHHHHHHHhCcCCC
Confidence 0111112599999 788864320 12346899999999999998853
No 19
>PF01663 Phosphodiest: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro: IPR002591 This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase I / nucleotide pyrophosphatase (nppase). These enzymes catalyse the cleavage of phosphodiester and phosphosulphate bonds in NAD, deoxynucleotides and nucleotide sugars []. Another member of this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity []. The alignment encompasses the active site [, ]. Also present within this family is 60 kDa Ca2+-ATPase from Myroides odoratus []. This signature also hits a number of ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis.; GO: 0003824 catalytic activity; PDB: 2XRG_A 2XR9_A 3T02_A 3T01_A 3SZZ_A 3SZY_A 3T00_A 3NKM_A 3NKN_A 3NKR_A ....
Probab=98.97 E-value=3.4e-09 Score=116.10 Aligned_cols=210 Identities=22% Similarity=0.221 Sum_probs=117.2
Q ss_pred EEEEEEcCCCchhhhh---hhhhHHHHHHhhcCcEEec-cccccCCCCchhhhhhhcCCCccccccccC----CCCC---
Q psy1363 307 VLVVGIDAVSRQNFLR---QMSRTYKYLDTHYELVDMR-GYNKIGDNTFPNLVAALTGMSEKELEQTCY----PTPE--- 375 (756)
Q Consensus 307 VliI~iDSlSr~~f~R---~mPkT~~fL~~~~~~~~f~-gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~----~~~~--- 375 (756)
||+|++|++++..+.+ .+|...+.+++ +.... ........|.|+..+|+||.+|.+++...+ +...
T Consensus 1 vv~i~iDGl~~~~l~~~~~~~p~l~~l~~~---G~~~~~~~s~~Ps~T~~~~~si~TG~~P~~HGi~~~~~~~~~~~~~~ 77 (365)
T PF01663_consen 1 VVVIGIDGLRPDLLDRYIGNLPNLKRLAEE---GVYGPNLRSVFPSTTAPNWASILTGAYPEEHGIIGNYWYDPKTGKES 77 (365)
T ss_dssp EEEEEETT-BHHHHHHHHTSSHHHHHHHHH---SEEECEEE-SSSBSHHHHHHHHHHSS-HHHHS--SSCEEETTTTEEE
T ss_pred cEEEEEeCCCHHHHHhHhccCHHHHHHHHC---CCCCCCceecCCCCcccchhhhhcCccccccCCccccccCccccccc
Confidence 7999999999999977 58887777666 44555 566667789999999999999998776532 1110
Q ss_pred ---CCC----C-ChhHHHHHHHHCCCeEEeeccCCCCC---C-CCcCCCCCCCCCC-CCCcchhhh--hhhhhccccccc
Q psy1363 376 ---STF----D-DCPFLWKNFSAAGFKTLYAEDSFGMS---T-FNYFKSGFAKSPT-DTFYNIFSK--ESEAVIGNTKIL 440 (756)
Q Consensus 376 ---~~l----d-~~p~Iw~~fk~aGY~T~~~eD~~~~g---~-F~y~~~GF~~~p~-Dhy~rp~~~--~~e~~~~~~~~~ 440 (756)
... + ..+.||..++++|..++...=..... . ......++..... .+| .|... ......+.. ..
T Consensus 78 ~~~~~~~~~~~~~~~~i~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~~~~~~~~~~~~-~~ 155 (365)
T PF01663_consen 78 TFWDELGDSGDVDSPPIWESLAKAGKKVAVFGWPGTHPPYPGLNGILDPSFGTPDTYRYY-SPKSLSDELYDGQGDN-PL 155 (365)
T ss_dssp CEESSSSGGGCCCCHEHHHHHHHTT-EEEECS-CTTSSHHHCCTCCCCTCTT-EESSTCC-CCSCCHHHHHHHC-HH-CH
T ss_pred cccccccccccccchhHHHHHHHcCCceeeeccccccccccccccccccccccccccccc-cccccccchhhccccc-cc
Confidence 000 1 23589999999999988763222110 0 0011111111111 111 22222 111100000 00
Q ss_pred CCccc-CCcchhHHHHHHHHHHHHHHhcCCceEEEEecCcc---Cc-------ccCChhHHHHHHHHHHHHHHHhCCCCC
Q psy1363 441 NAHLC-MGSQLIFKTVLEYALKYTSALRNYFYFAFVWTSSL---TH-------DYLNLPRLGDSILQKFVKNLNKNGHLN 509 (756)
Q Consensus 441 ~~~~C-~g~~~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~~---~H-------dy~~~i~~lD~~l~~~L~~L~~~glld 509 (756)
..... .......+.+.+.+...++ +.+|-|.++++... .| .+...+..+|..|+++++.|.+.|..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~l~~--~~~pdl~~~~~~~~D~~~H~~g~~s~~~~~~~~~~D~~ig~l~~~l~~~~~~~ 233 (365)
T PF01663_consen 156 YLAWFFEQSPELDEWITDAAEYLIQ--KERPDLIFVYFPEPDHIGHRYGPDSPEIEDAYRRIDQAIGRLLEALDENGLLE 233 (365)
T ss_dssp STCHHHSSSHHHHHHHHHHHHHHHH--TTTESEEEEEEECCHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHHTT-TT
T ss_pred cccccccchHHHHHHHHHHHHHHHh--hCCCCEEEEEecCCCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 00000 0012233444445555444 34577877776553 33 134578999999999999999999999
Q ss_pred CEEEEEEcCCCCCC
Q psy1363 510 RTILILTSDHGLRW 523 (756)
Q Consensus 510 NTiVIf~SDHG~r~ 523 (756)
+|.||++||||..-
T Consensus 234 ~~~iiv~SDHG~~~ 247 (365)
T PF01663_consen 234 DTNIIVTSDHGMTP 247 (365)
T ss_dssp TEEEEEEES---EE
T ss_pred ceEEEEEccCcccc
Confidence 99999999999743
No 20
>TIGR01696 deoB phosphopentomutase. This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli and Bacillus. This model matches pfam01676 for Metalloenzyme superfamily.
Probab=98.76 E-value=1.4e-07 Score=104.20 Aligned_cols=152 Identities=20% Similarity=0.209 Sum_probs=99.6
Q ss_pred ChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHHH
Q psy1363 380 DCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEYA 459 (756)
Q Consensus 380 ~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy~ 459 (756)
..|++++.++++|+.+..+++..- .|. ..|..+.- . ....+..++.+
T Consensus 215 ~~pTvld~l~~aG~~V~~VGki~D--iF~--g~Glt~a~-------------~----------------~~~~~~~~~~~ 261 (381)
T TIGR01696 215 FAPTVLQKLKDEGHDVISIGKIAD--IYD--GEGITKKV-------------R----------------TTSNMDGMDAT 261 (381)
T ss_pred CCCCHHHHHHHCCCeEEEEccHHh--Eec--CCCccccc-------------C----------------CCCHHHHHHHH
Confidence 468999999999999999988741 221 22332210 0 00123345555
Q ss_pred HHHHHHhcCCceEEEEecCc----cCcc-----cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCc
Q psy1363 460 LKYTSALRNYFYFAFVWTSS----LTHD-----YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETY 530 (756)
Q Consensus 460 ~~Fi~~~~~~PfF~~~w~~~----~~Hd-----y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~ 530 (756)
.+.+++ +.+=|.|+.+.. ..|. |...+..+|..++++++.|+ +||+||+|||||.-.+.. .+.
T Consensus 262 l~aL~~--~~~~lif~nl~d~D~~~GH~~d~~~y~~ale~vD~~Lg~ll~~L~-----~~tllIITADHG~Dp~~~-~t~ 333 (381)
T TIGR01696 262 IKEMKE--DFTGISFTNLVDFDALWGHRRDVAGYAAALELFDRRLPELFSLLR-----EDDLLIITADHGNDPTWT-GTD 333 (381)
T ss_pred HHHHhc--CCCCEEEEEeCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHhc-----cCCEEEEECCCCCCCCCC-CCc
Confidence 555542 223355554433 2553 67899999999999999985 589999999999832211 111
Q ss_pred CCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCC
Q psy1363 531 QGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSS 585 (756)
Q Consensus 531 ~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~ 585 (756)
...++||+| |++|+ ++.+ .+...++|..||.||+++++|++.
T Consensus 334 --HTre~VPlI-i~gp~-i~~g---------~~l~~~~slaDIapTIldllGv~~ 375 (381)
T TIGR01696 334 --HTREYIPVL-VYSPK-VKPG---------HSLGHRETFADIGATIADNFGTSD 375 (381)
T ss_pred --CCCCCEeEE-EEECC-CCCC---------ceeCCCCEehhHHHHHHHHcCcCC
Confidence 113599999 78887 3321 123467899999999999999874
No 21
>PRK05434 phosphoglyceromutase; Provisional
Probab=98.70 E-value=1.8e-07 Score=107.24 Aligned_cols=116 Identities=18% Similarity=0.222 Sum_probs=80.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCceEEEEecCc---cCcc-----cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCC
Q psy1363 450 LIFKTVLEYALKYTSALRNYFYFAFVWTSS---LTHD-----YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGL 521 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~---~~Hd-----y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~ 521 (756)
.......+.+.++++ ++++-|.++.+.. ..|. +...++.+|..++++++.|++.|. +||||||||.
T Consensus 370 Ms~~e~~d~~i~~l~--~~~~Dfv~vnf~~~D~vGHtg~~~a~~~AIe~vD~~LGrll~aLk~~g~----ivIITADHGn 443 (507)
T PRK05434 370 MSAYEVTDKLVEAIE--SGKYDFIILNFANPDMVGHTGNLEAAVKAVEAVDECLGRVVDAVLKVGG----TLLITADHGN 443 (507)
T ss_pred CcHHHHHHHHHHHHh--ccCCCEEEEEecCcchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEEcCCCc
Confidence 344557777777776 3567788876543 2453 567899999999999999998876 8999999995
Q ss_pred CC--CCCC-CC-cCCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 522 RW--GDFR-ET-YQGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 522 r~--g~~r-~t-~~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
.. ++.. .. ....--.+||++ |++|+..+ ....+..||+|||++++|++.|
T Consensus 444 ~e~m~d~~tg~~~~~HT~~~VPlI-I~~p~~i~--------------~~~~sL~DIaPTIL~LlGi~~P 497 (507)
T PRK05434 444 AEQMIDPETGQPHTAHTTNPVPFI-LVGGKALR--------------LEGGKLADIAPTILDLLGLEQP 497 (507)
T ss_pred ccccccCCCCCcccCCCCeeeEEE-EEECCccc--------------CCCccHHHHHHHHHHHhCcCCC
Confidence 32 1111 01 111112589999 78886211 1246889999999999998853
No 22
>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type. A member of this family, AcpA from Burkholderia mallei, has been charactized as a surface-bound glycoprotein with acid phosphatase activity, as can be shown with the colorigenic substrate 5-bromo-4-chloro-3-indolyl phosphate. This family shares regions of sequence similarity with phosphocholine-preferring phospholipase C enzymes (TIGR03396) from many of the same species.
Probab=98.59 E-value=3.3e-07 Score=103.87 Aligned_cols=109 Identities=16% Similarity=0.210 Sum_probs=80.9
Q ss_pred cCCceEEEEecCcc--CcccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcC-CCCCCCCCCCCcCCCcc--ccceeE
Q psy1363 467 RNYFYFAFVWTSSL--THDYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSD-HGLRWGDFRETYQGHLE--ERLPFL 541 (756)
Q Consensus 467 ~~~PfF~~~w~~~~--~Hdy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SD-HG~r~g~~r~t~~G~~E--~rvP~l 541 (756)
..-|-++|+--+.. .|+-...+..+|..++++|+.|++.++++||+|||++| ||.-++.....+...+| .|+|+|
T Consensus 342 g~LPqvSfI~P~~~~d~Hp~~s~v~~gD~~vg~vl~aL~~~p~w~NTlII~T~DENGG~~Dhv~pPk~~~~ggG~RVP~I 421 (483)
T TIGR03397 342 GKLPQVSFYKPQGNLNEHAGYADVAAGDRHIADVIAHLQKSPQWKNMVVIVTYDENGGFWDHVAPPKGDRWGPGTRIPAI 421 (483)
T ss_pred CCCCcEEEEeCCCCCCCCcCCCCHHHHHHHHHHHHHHHHhCccccCcEEEEEEECCCCcCcCCCCCCcCCCCCccEEEEE
Confidence 45699998854422 35555679999999999999999999999999999999 98533211111222334 499999
Q ss_pred EEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 542 FFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 542 ~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
|++|.. ++ + .. .+.+.+|+|+.+||.+++|++.+
T Consensus 422 -VisP~~-k~---G-----~v-~~~~~dh~SiL~Tie~~~GL~~L 455 (483)
T TIGR03397 422 -VVSPFA-KK---G-----YV-DHTPYDTTSILRFITRRFGLPPL 455 (483)
T ss_pred -EEECCC-CC---C-----cE-eCceeeeehHHHHHHHHhCCCCc
Confidence 678865 32 2 12 36799999999999999999863
No 23
>KOG2125|consensus
Probab=98.58 E-value=5.6e-07 Score=103.32 Aligned_cols=254 Identities=20% Similarity=0.197 Sum_probs=154.7
Q ss_pred CCCCCCeEEEEEEcCCCchhh---hhhhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCCC
Q psy1363 300 PPEPEYSVLVVGIDAVSRQNF---LRQMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPES 376 (756)
Q Consensus 300 ~~~~~pNVliI~iDSlSr~~f---~R~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~~ 376 (756)
+++..+.++.+++|.++.+-. ...||.|...+.+ -.+.-+..|-.....|.|-+-|+.||..+.-.+...+-....
T Consensus 46 ~~~~~~~lvf~viDalr~dF~~~s~~smp~t~s~~~~-~~a~g~~a~A~~PTVTmPRLka~tTGtlp~FidvllNva~~~ 124 (760)
T KOG2125|consen 46 PPPEKDRLVFVVIDALRADFLFSSKESMPFTQSLLAN-GDAKGYHAFARPPTVTMPRLKAITTGTLPSFIDVLLNVATQE 124 (760)
T ss_pred CCcccceEEEEEhhhhhhhccccCCCCCccHHHHHhc-CCceeeecccCCCcccchhhhhhhcCCCccHHHHHHhhhhHh
Confidence 346678999999999976644 2369999888875 556666677778899999999999999887554332211111
Q ss_pred CCCChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHH
Q psy1363 377 TFDDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVL 456 (756)
Q Consensus 377 ~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~ll 456 (756)
..+ ..+-..|++.|=+-.+.||-.|.-.|--.-.-|.. -+.++.+-|.... +.+ ++..++ . +.--
T Consensus 125 ~~~--d~wl~q~~~~n~kv~f~GDdTWLkLfPs~f~~f~g-~~SFfVsDyt~vD-nNV--Tr~L~~-l--------~~~~ 189 (760)
T KOG2125|consen 125 LLD--DNWLGQFFQINKKVHFNGDDTWLKLFPSEFLRFEG-VTSFFVSDYTDVD-NNV--TRHLPT-L--------ELNS 189 (760)
T ss_pred hcc--cHHHHHHHHhCcEEEEccchHHHHHhhHHHHhccC-cceEEehhhhhhh-hhh--hhcCCc-h--------hhhh
Confidence 112 22556899999999999997765443100011111 2223333333221 111 121111 0 1111
Q ss_pred HHHHHHHHHhcCCceEEEEecCccCcc-------cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCC-CCCCC
Q psy1363 457 EYALKYTSALRNYFYFAFVWTSSLTHD-------YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRW-GDFRE 528 (756)
Q Consensus 457 dy~~~Fi~~~~~~PfF~~~w~~~~~Hd-------y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~-g~~r~ 528 (756)
+.|.-.+-.|-+ ..+..|- -.+....||+-++++.+.+++..-.++|++|+++|||..- |.|.+
T Consensus 190 ~~Wd~lILHYLG--------lDHIGH~~G~~Sp~vp~KLkEmDeiv~~I~~~~~~~~s~d~tllil~gDHGM~e~GnHGG 261 (760)
T KOG2125|consen 190 SDWDLLILHYLG--------LDHIGHVLGPSSPLVPAKLKEMDEIVKRIHDYLMEHRSGDQTLLILCGDHGMTESGNHGG 261 (760)
T ss_pred cchhHHHHHHhc--------cceeccccCCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEccccccccCCCCC
Confidence 111112222211 1122232 2456799999999999999998888899999999999854 55655
Q ss_pred CcCCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCCc
Q psy1363 529 TYQGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSLK 587 (756)
Q Consensus 529 t~~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~~ 587 (756)
...| |++.|++ ++.|..=-..++ .+ ....+-..|+.|||..++|++.|.
T Consensus 262 ss~~--ET~s~l~-~~~~N~~~~d~~-----~a--~~~rv~QiDl~pTI~~llgvpIP~ 310 (760)
T KOG2125|consen 262 SSPG--ETSSPLL-FLLPNSNISDWL-----AA--GLERVEQIDLAPTIALLLGVPIPK 310 (760)
T ss_pred CCcc--cccccEE-EEecCCCCcccc-----hh--ccchhhhhhhHHHHHHHhCCCccC
Confidence 4333 8899999 577731000011 11 123466799999999999998764
No 24
>TIGR02335 hydr_PhnA phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.
Probab=98.53 E-value=9.1e-07 Score=99.75 Aligned_cols=201 Identities=14% Similarity=0.127 Sum_probs=116.1
Q ss_pred CCeEEEEEEcCCCchhhhh-----hhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCC----CC
Q psy1363 304 EYSVLVVGIDAVSRQNFLR-----QMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYP----TP 374 (756)
Q Consensus 304 ~pNVliI~iDSlSr~~f~R-----~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~----~~ 374 (756)
.-.|+||++|++++..+.+ .||...+++++ | .....-...-..|.||..+|+||.+|..++...+. ..
T Consensus 12 ~~~vvvi~vDGl~~~~l~~~~~~g~~P~L~~l~~~--G-~~~~~~s~~Ps~T~p~~tSi~TG~~P~~HGI~gn~~~dp~~ 88 (408)
T TIGR02335 12 QRPTVVICVDGCDPEYINRGIADGVAPFIAELTGF--G-TVLTADCVVPSFTNPNNLSIVTGAPPAVHGICGNYYLDQDT 88 (408)
T ss_pred CCCEEEEEeCCCCHHHHHhhhhcCCCchHHHHHhc--C-ceeeccCCCCCcccccceeeecCCChhhCceecceEEecCC
Confidence 3589999999999999966 59998777776 2 22333455667899999999999999988754321 10
Q ss_pred C-------CCCCChhHHHHHHHHCCCeEEeeccCCCCCCC-CcCCCCC--CCCCCCC-Ccchh-hhhhhhhcccccccCC
Q psy1363 375 E-------STFDDCPFLWKNFSAAGFKTLYAEDSFGMSTF-NYFKSGF--AKSPTDT-FYNIF-SKESEAVIGNTKILNA 442 (756)
Q Consensus 375 ~-------~~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F-~y~~~GF--~~~p~Dh-y~rp~-~~~~e~~~~~~~~~~~ 442 (756)
. ...-..|+||+.++++|++|+.+.-+..+..| .+...|+ .....+. +..+. ....+..++. ..
T Consensus 89 ~~~~~~~~~~~~~~pTi~e~a~~aG~~ta~v~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~g~~~~~~~vg~----~~ 164 (408)
T TIGR02335 89 GEEIMMTDAKYLRAPTILGEMSKAGVLTAVVTAKDKLRKVLGHQLKGICFSSEKADQVNLEEHGVENILALVGR----PR 164 (408)
T ss_pred CceEEEeChhhhCCchHHHHHHHcCCeEEEEecccccccccCcccccccccccccccccccccchHHHHHHhCC----CC
Confidence 0 01114689999999999999887532111111 0111111 1000000 00000 0001111110 00
Q ss_pred cccCCcchhHHHHHHHHHHHHHHhcCCceEEEEe-cCccCccc-------CChhHHHHHHHHHHHHHHHhCCCCCCEEEE
Q psy1363 443 HLCMGSQLIFKTVLEYALKYTSALRNYFYFAFVW-TSSLTHDY-------LNLPRLGDSILQKFVKNLNKNGHLNRTILI 514 (756)
Q Consensus 443 ~~C~g~~~~~~~lldy~~~Fi~~~~~~PfF~~~w-~~~~~Hdy-------~~~i~~lD~~l~~~L~~L~~~glldNTiVI 514 (756)
..+. .....+..++.+...+++ .+|-|.++- .....|.| ...+..+|..++++++. +|.||
T Consensus 165 ~~~~-~~~~~~~~~~~a~~~l~~--~~pdllyl~~~D~~gH~~Gp~S~e~~~~~~~lD~~l~~L~~~--------~~~vv 233 (408)
T TIGR02335 165 PDVY-SADLSLFVLDAGLSLLTN--ERPDLMYLSTSDYVQHKHAPGEPESNAFYAAMDSRFKRYHEQ--------GAIVA 233 (408)
T ss_pred Cccc-hHHHHHHHHHHHHHHHhc--cCCcEEEecCcCccccccCCCCHHHHHHHHHHHHHHHHHHHC--------CCEEE
Confidence 0010 012334456677776654 367676652 12235544 35788899999998762 69999
Q ss_pred EEcCCCCC
Q psy1363 515 LTSDHGLR 522 (756)
Q Consensus 515 f~SDHG~r 522 (756)
++||||..
T Consensus 234 vtaDHG~~ 241 (408)
T TIGR02335 234 ITADHGMN 241 (408)
T ss_pred EECCCCCc
Confidence 99999974
No 25
>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.
Probab=98.52 E-value=3.3e-06 Score=94.46 Aligned_cols=69 Identities=17% Similarity=0.156 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCceEEEEecCcc---Ccc-----cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCC
Q psy1363 450 LIFKTVLEYALKYTSALRNYFYFAFVWTSSL---THD-----YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGL 521 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~~---~Hd-----y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~ 521 (756)
+.-..+++.+.+++++ .+++||.++..... .|. +...+..+|+.++.+++.++ ..+||+||++||||.
T Consensus 231 psL~emt~~al~~L~~-~~~gFfl~ve~~~iD~~gH~~d~~~~~~~l~~~D~av~~~l~~l~---~~~dTLiIvTADHg~ 306 (384)
T cd00016 231 PSLAEMTEKAIDVLSK-NPNGFFLMVEGGRIDHAHHANDAAGALSETLAFDDAVEAALDFAK---KDGDTLVVVTADHSH 306 (384)
T ss_pred CCHHHHHHHHHHHHHh-cCCcEEEEEeCCCCCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh---CCCCeEEEEECCCCC
Confidence 4557788889999875 34799999986433 443 45678889999999999997 258999999999998
Q ss_pred C
Q psy1363 522 R 522 (756)
Q Consensus 522 r 522 (756)
.
T Consensus 307 ~ 307 (384)
T cd00016 307 G 307 (384)
T ss_pred C
Confidence 4
No 26
>PRK12383 putative mutase; Provisional
Probab=98.33 E-value=2.4e-06 Score=95.31 Aligned_cols=163 Identities=15% Similarity=0.137 Sum_probs=103.0
Q ss_pred CChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHH
Q psy1363 379 DDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEY 458 (756)
Q Consensus 379 d~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy 458 (756)
+-.+.+...++++|+.++.+++... .|+ ..|... +. . ....+..++.
T Consensus 231 ~p~~~v~~~l~~~G~~v~~VGKi~D--i~s--~~G~t~----~~------------------------~-~~~t~~~~~~ 277 (406)
T PRK12383 231 DPKVQVPQKLYEAGVPVVLVGKVAD--IVN--NPYGVS----WQ------------------------N-LVDTQRVMDI 277 (406)
T ss_pred CCcchhhhHHHHcCCCEEEEEEhHH--eec--cCCccc----cc------------------------c-cCCHHHHHHH
Confidence 3337888899999999999977641 111 111111 00 0 0111234555
Q ss_pred HHHHHHHhcCCceEEEEecCc---cCcc-----cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCc
Q psy1363 459 ALKYTSALRNYFYFAFVWTSS---LTHD-----YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETY 530 (756)
Q Consensus 459 ~~~Fi~~~~~~PfF~~~w~~~---~~Hd-----y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~ 530 (756)
+.+-+++ +.+=|.|+.+.. ..|+ |...+..+|..++++++.|+ ++|++|+|||||.... ...+
T Consensus 278 ~l~aL~~--~~~dlvfvnl~~~D~~GH~~d~~~y~~aiE~iD~~lg~ll~~L~-----~~~lliITaDHG~d~~-~~~t- 348 (406)
T PRK12383 278 TLDEFNT--HPTAFICTNIQETDLAGHAEDVARYAERLEVVDRNLARLLEAMT-----PDDCLVVMADHGNDPT-IGHS- 348 (406)
T ss_pred HHHHHhc--CCCCEEEEeccCCccccccCCHHHHHHHHHHHHHHHHHHHHHhc-----cCCEEEEEcCCCCCCC-CCCc-
Confidence 5554442 223466665543 3553 67899999999999999986 5899999999997321 1111
Q ss_pred CCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCCchhhhccCCCCCCCCCCCcccCCc
Q psy1363 531 QGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSLKDELLRQDRGPDKDNIPRGISLFR 610 (756)
Q Consensus 531 ~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~~~~~~~~~~~~~~~~~~~g~SLF~ 610 (756)
....++||++ |++|+. +. .+.....|..||.||+++++|++.+ ..|+||+.
T Consensus 349 -~HTre~VPlL-i~gp~i-~~----------~~lg~~~slaDIapTIl~~~Gv~~p----------------~~G~Sfl~ 399 (406)
T PRK12383 349 -HHTREVVPLL-VYQKGL-QA----------TQLGVRTTLSDVGATVCEFFGAPPP----------------QNGRSFLS 399 (406)
T ss_pred -CCCCcceEEE-EEECCc-cc----------ccCCCCcEEhhHHHHHHHHcCCCCC----------------CCCCcHHH
Confidence 1224699999 788873 21 0113457999999999999998731 15888876
Q ss_pred cC
Q psy1363 611 NI 612 (756)
Q Consensus 611 ~i 612 (756)
.+
T Consensus 400 ~L 401 (406)
T PRK12383 400 SL 401 (406)
T ss_pred Hh
Confidence 54
No 27
>KOG2645|consensus
Probab=97.81 E-value=0.0001 Score=82.70 Aligned_cols=193 Identities=16% Similarity=0.188 Sum_probs=111.5
Q ss_pred CCCCeEEEEEEcCCCchhhhhh-hhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccC----CC-C-
Q psy1363 302 EPEYSVLVVGIDAVSRQNFLRQ-MSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCY----PT-P- 374 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~R~-mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~----~~-~- 374 (756)
..+|.|++|.+|.....-+.+. +|. ++.+++ .|.....-..+.-..|+||..+|.||++++..+.+.+ +. +
T Consensus 20 ~~~p~lllis~DGFr~~yl~~~~~p~-i~~l~~-~gv~~~~~~pvFpT~TfPNhySivTGlype~HGIv~N~~~Dp~~~~ 97 (418)
T KOG2645|consen 20 STHPKLLLISFDGFRADYLYKVLTPN-IHKLAS-CGVWVTYVIPVFPTKTFPNHYSIVTGLYPESHGIVGNYFFDPKTNK 97 (418)
T ss_pred CCCCCEEEEEecccchhhccCccCcc-HHHHHh-ccccccEEEecCcccccCCcceeeecccchhceeeceeeecccccc
Confidence 4567999999999999888774 555 455555 4433333455566789999999999999998776422 10 0
Q ss_pred ---CC---CCC----ChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcc
Q psy1363 375 ---ES---TFD----DCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHL 444 (756)
Q Consensus 375 ---~~---~ld----~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~ 444 (756)
.+ .++ .-..||....++|...+ ++-++ |=+..-.++...|+ ... +...
T Consensus 98 ~F~~~~~~~~~~~ww~~ePiW~t~~~~~~kaa---------~~~wp--g~~v~~~~~~~~~~--~~~---n~~~------ 155 (418)
T KOG2645|consen 98 EFDLFTNSDLEPFWWNGEPIWVTARKQGRKVA---------TFFWP--GCEVEIHGYIPDPY--DIY---NQSV------ 155 (418)
T ss_pred ccccCCCccccccccCCCcchhhhhhcCCcee---------EEecC--Cccccccccccccc--ccc---cccc------
Confidence 00 111 12567777667775532 11111 11111111111111 000 0000
Q ss_pred cCCcchhHHHHHHHHHHHHHHhcCCceEEEEec---CccCccc-------CChhHHHHHHHHHHHHHHHhCCCCCCEEEE
Q psy1363 445 CMGSQLIFKTVLEYALKYTSALRNYFYFAFVWT---SSLTHDY-------LNLPRLGDSILQKFVKNLNKNGHLNRTILI 514 (756)
Q Consensus 445 C~g~~~~~~~lldy~~~Fi~~~~~~PfF~~~w~---~~~~Hdy-------~~~i~~lD~~l~~~L~~L~~~glldNTiVI 514 (756)
.-+.....+++ .++ ...++|=|..+.+ ....|.| -..++.+|..++.+++.|++.++++.+=||
T Consensus 156 --~~~~~~~~i~~--~~~--~~~e~p~l~~~Y~~~pD~~gh~~Gp~~~~v~~~l~~vD~~i~~L~~~Lk~r~L~~~vNvI 229 (418)
T KOG2645|consen 156 --PLEERADTVLD--LDL--PEKERPDLLLLYVEEPDHSGHRYGPDSPEVEKALKEVDDFIGYLIKGLKDRNLFEDVNVI 229 (418)
T ss_pred --cHHHHHHHHhc--ccc--ccccCCCceEEeccCCCccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHccccccceEE
Confidence 00111222333 222 2345565544332 2334533 347899999999999999999999999999
Q ss_pred EEcCCCCCCC
Q psy1363 515 LTSDHGLRWG 524 (756)
Q Consensus 515 f~SDHG~r~g 524 (756)
++||||..-.
T Consensus 230 i~SDHGM~~~ 239 (418)
T KOG2645|consen 230 IVSDHGMTDI 239 (418)
T ss_pred EeecCCcccc
Confidence 9999998654
No 28
>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Probab=97.69 E-value=0.00065 Score=78.38 Aligned_cols=185 Identities=13% Similarity=0.104 Sum_probs=101.5
Q ss_pred ChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhc-ccccccCCcccCCcchhHHHHHHH
Q psy1363 380 DCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVI-GNTKILNAHLCMGSQLIFKTVLEY 458 (756)
Q Consensus 380 ~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~-~~~~~~~~~~C~g~~~~~~~lldy 458 (756)
-..+|-+.+.++|++-.-+-......--+|-..|=.+.|.+ .+.|... .... ....+=..+..+...+.+.
T Consensus 340 ~~ntLgevls~~Gl~QlriAETEKyaHVTfFfNGG~e~~f~-------~e~e~~i~ipsp-~v~tyd~~PeMSA~eVtd~ 411 (558)
T PLN02538 340 IERTSGEYLVANGVRTFACSETVKFGHVTFFWNGNRSGYFN-------EKLEEYVEIPSD-NGIPFNVQPKMKALEIAEK 411 (558)
T ss_pred CCCCHHHHHHhCCCceEEeecccccceeEEeecCCccccCC-------CCCceEEECCCC-CCCCcccCCCCCHHHHHHH
Confidence 34688999999998765433222222112212232232221 1111100 0000 0012223345666777777
Q ss_pred HHHHHHHhcCCceEEEEecCc---cCcc-----cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCC--------
Q psy1363 459 ALKYTSALRNYFYFAFVWTSS---LTHD-----YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLR-------- 522 (756)
Q Consensus 459 ~~~Fi~~~~~~PfF~~~w~~~---~~Hd-----y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r-------- 522 (756)
+.+-+.+ ++.=|.++.+.. ..|. +...+..+|..++++++.+++.| .++|+|||||..
T Consensus 412 ~i~~i~~--~~ydfi~vNfan~DmvGHtG~~ea~ikAIE~vD~~Lg~Il~al~~~g----~~liITADHGNaE~M~d~~~ 485 (558)
T PLN02538 412 ARDALLS--GKFDQVRVNLANGDMVGHTGDLEATIVACEAVDAAVKEILDAVEQVG----GIYLVTADHGNAEDMVKRDK 485 (558)
T ss_pred HHHHHhc--CCCCEEEEeccCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC----CEEEEeCCCCCchhhccccc
Confidence 7776653 344466554432 3553 56789999999999999997644 899999999953
Q ss_pred CCCC-----CC--CcCCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 523 WGDF-----RE--TYQGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 523 ~g~~-----r~--t~~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
.|.- .. ...++-...||++ ++-|+ .+.+. + ++.. -+.-+.-|+.||+++++|++.|
T Consensus 486 ~G~p~~~~~Gtp~~~t~HT~npVP~I-i~g~~-~~~~~----~-l~~~-l~~~gLaDVApTIL~lLGl~~P 548 (558)
T PLN02538 486 SGKPLLDKDGNPQILTSHTLAPVPVA-IGGPG-LPPGV----R-FRDD-LPTAGLANVAATVMNLHGFEAP 548 (558)
T ss_pred cCCccccccCCCCCCCCCCCCCcCEE-EEeCC-cccCc----c-cccC-ccCCcHHhHHHHHHHHhCCCCc
Confidence 1110 00 1233345689998 45443 22110 0 1110 0122488999999999999865
No 29
>COG1524 Uncharacterized proteins of the AP superfamily [General function prediction only]
Probab=97.62 E-value=6.7e-05 Score=85.89 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=51.0
Q ss_pred CCCCeEEEEEEcCCCchhhhhh---hhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCcccccccc
Q psy1363 302 EPEYSVLVVGIDAVSRQNFLRQ---MSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTC 370 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~R~---mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~ 370 (756)
..+.=+++|.+|+++.+.+.+. ||.+.++..+ |.....-....-.-|.|+..+|.||.+|..++...
T Consensus 36 ~~~~klvli~iDgl~~d~~~~~~~~~p~l~~l~~~--g~~~~~~~s~~Pt~T~p~~~tl~TG~~P~~hgi~~ 105 (450)
T COG1524 36 APKKKLVLISIDGLRADVLDRKAGILPFLSSLAEN--GVHVAELISVFPTTTRPRHTTLITGSYPDEHGIVG 105 (450)
T ss_pred cchheEEEEEEeccChhhhhhhccCchhHHHHHhC--CceeEEEecCCCccccccceeeecccCcchhcccc
Confidence 4556899999999999999773 6665555543 44355556667778999999999999999887653
No 30
>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases. This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....
Probab=97.41 E-value=0.00067 Score=71.82 Aligned_cols=114 Identities=23% Similarity=0.325 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEecCc---cCcc-----cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCC
Q psy1363 452 FKTVLEYALKYTSALRNYFYFAFVWTSS---LTHD-----YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRW 523 (756)
Q Consensus 452 ~~~lldy~~~Fi~~~~~~PfF~~~w~~~---~~Hd-----y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~ 523 (756)
.+.+++.+.+.+++ +++-|.++.+.. ..|. |...++.+|..|+++++.+++ +++++|+|||||...
T Consensus 125 ~~~~~~~~~~~l~~--~~~~~v~~~~~~~D~~GH~~~~~~~~~~ie~~D~~l~~l~~~~~~----~~~~liiTaDHg~~~ 198 (252)
T PF01676_consen 125 AKEIAEAAIEALKK--DKYDFVFVHVKGTDEAGHRGDPEAYIEAIERIDRFLGRLLEALDK----EDDLLIITADHGNDE 198 (252)
T ss_dssp HHHHHHHHHHHHHH--TTSSEEEEEEEHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHH----TTEEEEEEESSBSTT
T ss_pred hHHHHHHHHHhhhc--ccCCeEEEeecCcchhhccCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEECCCCCcc
Confidence 34556777766644 334466665432 2453 678999999999999999965 689999999999854
Q ss_pred CCCCCCcCCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 524 GDFRETYQGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 524 g~~r~t~~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
.... .+.--+.||++ ++-|+ ++. .+..+..+.-|+.+||++++|++.+
T Consensus 199 ~~~~---~~Ht~~~VPll-~~g~~-~~~----------~~~~~~~~~~di~~ti~~~~G~~~~ 246 (252)
T PF01676_consen 199 TMGH---TSHTREPVPLL-IYGPG-VRG----------DSVGEFGELADIAPTILELLGLELP 246 (252)
T ss_dssp TSBS---SS-B-B-EEEE-EECTT-EEE-----------SC-STSBCGHHHHHHHHHHTGGHH
T ss_pred ccCC---cCCCCceEEEE-EEeCC-Ccc----------CccCcCCEEehHHHHHHHHcCCCch
Confidence 2111 22334689999 56553 221 1123456778999999999998743
No 31
>KOG2126|consensus
Probab=97.41 E-value=0.0022 Score=76.42 Aligned_cols=237 Identities=16% Similarity=0.137 Sum_probs=128.8
Q ss_pred eEEEEEEcCCCch------hhhh-----hhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCC
Q psy1363 306 SVLVVGIDAVSRQ------NFLR-----QMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTP 374 (756)
Q Consensus 306 NVliI~iDSlSr~------~f~R-----~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~ 374 (756)
+|+++++|.++.+ .-.+ +.+++...+.+ .++.-++...-...-|.+-+-||-||-.|.-.+...+-.
T Consensus 60 svvilliDaLrydf~ip~~~~~~y~n~~~~l~~~~~l~~-~~~~l~~f~ADpPTTTlQRLKGLTTGsLPTFID~GsNF~- 137 (895)
T KOG2126|consen 60 SVVILLIDALRYDFLIPINSPLPYHNRGTILQELKHLNK-SKAFLAKFIADPPTTTLQRLKGLTTGSLPTFIDIGSNFA- 137 (895)
T ss_pred ceEEEEeehhhhccccccCCCchhhhcchhHHHHHhhCc-chhHHHHHhcCCCccHHHHhhccccCCCccceeccccCC-
Confidence 4999999999988 2222 23445555555 444222322222233445566888898887554432211
Q ss_pred CCCCCChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHH
Q psy1363 375 ESTFDDCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKT 454 (756)
Q Consensus 375 ~~~ld~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~ 454 (756)
+..=.+..+-+.+.++|=...+.||..|...|-. -|.+. ++|- +| +... +.. . ...| -++
T Consensus 138 -g~~I~EDNfv~Ql~~~gk~vvflGDdTW~~LFp~---~f~~s--~s~p-Sf-nv~D--Ldt---V-Dn~v------~~~ 197 (895)
T KOG2126|consen 138 -GPAIAEDNFVRQLVLNGKSVVFLGDDTWTSLFPN---QFNKS--YSFP-SF-NVHD--LDT---V-DNGV------IEK 197 (895)
T ss_pred -CcccchhHHHHHHHHCCCeEEEecCccHHHhChH---hhcCC--CCCC-CC-CCcc--ccc---c-chHH------HHH
Confidence 1111456778889999999999999887666521 12211 1111 11 0000 000 0 0112 233
Q ss_pred HHHHHHH-----HHHHhcCCceEEEEecCccCc-------ccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCC
Q psy1363 455 VLEYALK-----YTSALRNYFYFAFVWTSSLTH-------DYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLR 522 (756)
Q Consensus 455 lldy~~~-----Fi~~~~~~PfF~~~w~~~~~H-------dy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r 522 (756)
+.++..+ .+..+-+ ..+..| ...+.+..||+-+.++++.|+ |||+.|+|||||..
T Consensus 198 if~~l~s~dwdVlIAHfLG--------VDH~GHk~GPdH~~M~~KL~qmD~vI~~ii~~md-----edTlLvVmGDHGMt 264 (895)
T KOG2126|consen 198 IFKSLNSKDWDVLIAHFLG--------VDHCGHKHGPDHPEMADKLVQMDRVINEIIKKMD-----EDTLLVVMGDHGMT 264 (895)
T ss_pred hhhhhccCchHHHHHHHhC--------cccccccCCCCCHHHHHHHHHHHHHHHHHHHHhc-----cCeeEEEecCCCCC
Confidence 3333322 1111100 111222 234677889999999999986 89999999999985
Q ss_pred -CCCCCCCcCCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 523 -WGDFRETYQGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 523 -~g~~r~t~~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
.|+|++.. ..|.+--++ ++-++. .....-..|..+-+-..|+.||+.-++|++-|
T Consensus 265 ~nGdHGGdS--~dEv~a~lf-~ySKk~------~f~~lp~~~~~~~~~QIDLVptlalllGlPIP 320 (895)
T KOG2126|consen 265 DNGDHGGDS--EDEVEATLF-AYSKKH------RFALLPPENKVESIEQIDLVPTLALLLGLPIP 320 (895)
T ss_pred CCCCCCCcc--HHHhhhhee-EEecCc------cccCCCCCCCccceeeehhHhHHHHHhCCCCC
Confidence 46665321 224343333 232221 11111112444457779999999999999876
No 32
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.0017 Score=70.73 Aligned_cols=153 Identities=21% Similarity=0.233 Sum_probs=94.8
Q ss_pred ChhHHHHHHHHCCCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHHH
Q psy1363 380 DCPFLWKNFSAAGFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEYA 459 (756)
Q Consensus 380 ~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy~ 459 (756)
..+++.+.|+++|..|..+||..- .|+ ..|..++- + . ......+|.+
T Consensus 225 ~~~tvl~~L~e~g~~vi~IGKI~D--I~~--~~Git~~~-----~----~--------------------~~n~~~~d~t 271 (397)
T COG1015 225 FAPTVLDKLKEAGRPVIAIGKIAD--IYA--GQGITEKV-----K----A--------------------VSNMDGMDVT 271 (397)
T ss_pred ChhhHHHHHHHcCCceEEEeeHHh--hhc--cccccccc-----c----C--------------------CCcHHHHHHH
Confidence 458999999999999999999752 333 23433321 0 0 0012334444
Q ss_pred HHHHHHhcCCceEEEEecCc----cCc-----ccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCc
Q psy1363 460 LKYTSALRNYFYFAFVWTSS----LTH-----DYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETY 530 (756)
Q Consensus 460 ~~Fi~~~~~~PfF~~~w~~~----~~H-----dy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~ 530 (756)
..-++..... -|.|.-+.+ ..| .|.+.+...|..|.++++.|+ ++-++|+|+|||.-- .+..|
T Consensus 272 l~~~~~~~~~-~~vFtNlVdfD~~yGHRrDv~gYa~aLe~FD~rL~e~~~~l~-----edDlLiiTADHGnDP-T~~gT- 343 (397)
T COG1015 272 LEEMKTAEFN-GLVFTNLVDFDSLYGHRRDVAGYAAALEEFDRRLPELIENLR-----EDDLLIITADHGNDP-TWGGT- 343 (397)
T ss_pred HHHHhcCCCC-cEEEEeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEecCCCCCC-CCCCC-
Confidence 4333321111 233322222 245 388999999999999999976 677999999999732 11122
Q ss_pred CCCccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 531 QGHLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 531 ~G~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
..--|++|+| ++-|+ ++.. . | ....|--||-+|+.+.+|++++
T Consensus 344 -dHTRE~iPvl-~y~~~-~k~~---~---l----g~r~tfADiGaTvA~~fgv~~~ 386 (397)
T COG1015 344 -DHTREYIPVL-VYGPG-LKPG---S---L----GTRETFADIGATVADNFGVSPP 386 (397)
T ss_pred -CccccccceE-EEcCC-ccCC---c---c----cccccHHHHHHHHHHHhCCCCc
Confidence 1234699999 55554 3321 1 1 2356788999999999999853
No 33
>COG3379 Uncharacterized conserved protein [Function unknown]
Probab=97.27 E-value=0.011 Score=65.23 Aligned_cols=91 Identities=18% Similarity=0.147 Sum_probs=64.9
Q ss_pred eEEEEEEcCCCchhhhh---hhhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccC--CCCCC----
Q psy1363 306 SVLVVGIDAVSRQNFLR---QMSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCY--PTPES---- 376 (756)
Q Consensus 306 NVliI~iDSlSr~~f~R---~mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~--~~~~~---- 376 (756)
-+++||+|+.+..-|.+ .||+..+.|++...+-- =+.+-+-|.|.+.+|+||++|.+++.... .....
T Consensus 5 K~~liGlDgvp~sl~~~f~~~lpnl~~Lm~~~s~G~l---~S~iPpIT~~~W~sl~TG~~PGe~GiygF~~Rkg~sy~~~ 81 (471)
T COG3379 5 KTLLIGLDGVPPSLFRQFRDNLPNLNKLMKNGSFGKL---ESGIPPITPAAWPSLFTGYNPGETGIYGFRHRKGNSYSEP 81 (471)
T ss_pred eEEEEEeCCCCHHHHHHHhhhhhHHHHHHHhcccccc---cccCCCcchhhHHHHhhccCCccccceeeecccCCccCce
Confidence 47999999999976643 69999999987322211 23356678899999999999998775421 11111
Q ss_pred CC-----CChhHHHHHHHHCCCeEEeec
Q psy1363 377 TF-----DDCPFLWKNFSAAGFKTLYAE 399 (756)
Q Consensus 377 ~l-----d~~p~Iw~~fk~aGY~T~~~e 399 (756)
+. =..+.+|..+.++||+.+.++
T Consensus 82 yva~Ss~vk~~~iWD~L~~kG~k~~V~~ 109 (471)
T COG3379 82 YVAHSSTVKEDPIWDLLGKKGKKSVVAG 109 (471)
T ss_pred ecccccccccccHHHHHhhcCceEEEEe
Confidence 11 156899999999999987764
No 34
>PF11658 DUF3260: Protein of unknown function (DUF3260); InterPro: IPR017744 This protein was identified by the partial phylogenetic profiling algorithm [] as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions. The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation [].
Probab=96.99 E-value=0.018 Score=65.41 Aligned_cols=224 Identities=15% Similarity=0.201 Sum_probs=134.3
Q ss_pred CCCCCeEEEEEEcCCCchhhhhh-hhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCCCCCC
Q psy1363 301 PEPEYSVLVVGIDAVSRQNFLRQ-MSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPESTFD 379 (756)
Q Consensus 301 ~~~~pNVliI~iDSlSr~~f~R~-mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~~~ld 379 (756)
+..+..||||-|=|+|++++.-. +.+ ...+++ .+ +.|.+||+...-+=|+.+=||-+.-.++-....... -.
T Consensus 192 ~~~pFDllvlnICSLsWdDl~a~gl~~-hPl~~~-FD-i~F~nFNSAtSYSGPAaIRLLRASCGQ~sH~~Ly~p----a~ 264 (518)
T PF11658_consen 192 DAQPFDLLVLNICSLSWDDLDAAGLRN-HPLWKR-FD-IVFDNFNSATSYSGPAAIRLLRASCGQPSHSDLYQP----AP 264 (518)
T ss_pred CCCCccEEEEEecccchhhHHHhCCcc-CchHHh-hc-chhcccccccccchHHHHHHHHhccCCcchHhhcCC----Cc
Confidence 36789999999999999999653 222 233443 33 569999998888889999888865443322211110 01
Q ss_pred ChhHHHHHHHHCCCeEEeeccCCCCCCCC-cC----CCC-CCCCCCCCCc-chhhhhhhhhcccccccCCcccCCcchhH
Q psy1363 380 DCPFLWKNFSAAGFKTLYAEDSFGMSTFN-YF----KSG-FAKSPTDTFY-NIFSKESEAVIGNTKILNAHLCMGSQLIF 452 (756)
Q Consensus 380 ~~p~Iw~~fk~aGY~T~~~eD~~~~g~F~-y~----~~G-F~~~p~Dhy~-rp~~~~~e~~~~~~~~~~~~~C~g~~~~~ 452 (756)
..=.|++.|+++||++-..-+-. |.|+ |. ..| -..++.+.-. .+.+. .+++. +-+..
T Consensus 265 ~qC~LF~nLa~lGf~~~l~mnHd--G~Fd~Fl~~ir~~G~l~~pl~s~~g~~~~~~----------~FDgS----pI~~D 328 (518)
T PF11658_consen 265 QQCYLFDNLAKLGFTQQLMMNHD--GHFDNFLQEIREDGGLQAPLMSQAGLPVALH----------SFDGS----PIYDD 328 (518)
T ss_pred ccccHHHHHHhcCCchhhccCCC--CccccHHHHHHHcCCCCCCCcCCCCCchHhh----------ccCCC----cccch
Confidence 23369999999999976554421 3332 10 011 1111111100 00000 11111 01223
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEecCccC--------------cccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcC
Q psy1363 453 KTVLEYALKYTSALRNYFYFAFVWTSSLT--------------HDYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSD 518 (756)
Q Consensus 453 ~~lldy~~~Fi~~~~~~PfF~~~w~~~~~--------------Hdy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SD 518 (756)
..+++.|.+=-.+..+.|--.|+-+.+++ .+|....+.+=+++.+|++.|+++| .|.+||+.--
T Consensus 329 ~~vL~rW~~~r~~~~~~~~A~~YNtIsLHDGNr~~~~~~~~s~~sY~~Ra~~Llddl~~F~~~Le~Sg--R~v~vv~VPE 406 (518)
T PF11658_consen 329 LAVLNRWLQQREKSDDGRVATFYNTISLHDGNRLPGSDRLNSLASYKPRAQKLLDDLDRFFDELEKSG--RKVMVVVVPE 406 (518)
T ss_pred HHHHHHHHHHHhhcCCCceEEEEeeeecccCCccCCCCCcccccchHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEecC
Confidence 34566665532233566777666554431 1355567777788999999999998 8999999999
Q ss_pred CCCCCCCCCCCcCCCccccceeEEEEcCcccc
Q psy1363 519 HGLRWGDFRETYQGHLEERLPFLFFIMPQTFK 550 (756)
Q Consensus 519 HG~r~g~~r~t~~G~~E~rvP~l~I~~P~~~r 550 (756)
||...-+-+.--.|+.|.--|-| +++|-.+|
T Consensus 407 HGAAlrGDk~QiaGLReIPsP~I-thvPVgiK 437 (518)
T PF11658_consen 407 HGAALRGDKMQIAGLREIPSPSI-THVPVGIK 437 (518)
T ss_pred ccccccccchhhccccCCCCCcc-eecceEEE
Confidence 99866444555578888767776 56665443
No 35
>PF04185 Phosphoesterase: Phosphoesterase family; InterPro: IPR007312 This entry includes both bacterial phospholipase C enzymes (3.1.4.3 from EC) and eukaryotic acid phosphatases 3.1.3.2 from EC.; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 2D1G_B.
Probab=96.94 E-value=0.013 Score=65.69 Aligned_cols=232 Identities=16% Similarity=0.118 Sum_probs=105.6
Q ss_pred hhhhHHHHHHhhcCcEEecccc-ccCCCCchhhhhhhcCCCccccccccCCCCC--CCCCChhHHHHHHHHCCCeEE-ee
Q psy1363 323 QMSRTYKYLDTHYELVDMRGYN-KIGDNTFPNLVAALTGMSEKELEQTCYPTPE--STFDDCPFLWKNFSAAGFKTL-YA 398 (756)
Q Consensus 323 ~mPkT~~fL~~~~~~~~f~gyn-~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~--~~ld~~p~Iw~~fk~aGY~T~-~~ 398 (756)
.+|-..++.++ ...+.+|. ++...|.||++.+++|......... .+... ...-..++||+.|.++|-.=. |.
T Consensus 122 ~~P~~~~LA~~---f~l~Dnyf~s~~~pS~PNr~~l~sG~~~~~~~~~-~~~~~~~~~~~~~~ti~d~L~~aGisW~~Y~ 197 (376)
T PF04185_consen 122 DLPFLWALADQ---FTLCDNYFCSVPGPSQPNRLYLISGTSDGVGNNG-NPFIDNPSPPFSWPTIFDRLSAAGISWKWYQ 197 (376)
T ss_dssp TSHHHHHHHHH---SEEESSEE-SSSS-HHHHHHHHHHS---TT-STS--TTS-EEES------HHHHHHHHT--EEEEE
T ss_pred CChHHHHHHhh---eEEecccccCCCCCCCCCceEEEeeccCccccCC-CCceecCCCCcccccHHHHHHHcCCceEeCe
Confidence 46666555554 66777776 8888999999999999874221100 00000 000146789999999996643 56
Q ss_pred ccCCCCCCCCcCCCCCCCCCCCCC-cc-hhhhhhhhhcccccccCCcccCCcchhHHHHHHHHHHHHHHhcCCceEEEEe
Q psy1363 399 EDSFGMSTFNYFKSGFAKSPTDTF-YN-IFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEYALKYTSALRNYFYFAFVW 476 (756)
Q Consensus 399 eD~~~~g~F~y~~~GF~~~p~Dhy-~r-p~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy~~~Fi~~~~~~PfF~~~w 476 (756)
|++...+. + ...++......++ .. +.+.... .....+.......+.+.+.++ ...-|-|+|+.
T Consensus 198 e~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~f~~d~~-----~g~LP~~sfI~ 262 (376)
T PF04185_consen 198 EGYPNPGD-N-GLAGFDPYFDYFYQPFNPPSFGSY--------SPNPDRANHIVPLSQFYADLA-----NGTLPQVSFIE 262 (376)
T ss_dssp TT-S-SEE-E-TTEEE---EEE-TTS-E--S-GGG--------TTSBSTTTTEEECHHHHHHHH-----TT---SEEEEE
T ss_pred ecCCccCc-c-cccccccchhhhhccccccccccc--------ccccccccccchHHHHHHHHH-----cCCCCceEEEE
Confidence 66553211 0 0111111000000 00 0000000 000111111110111222221 13469999886
Q ss_pred cCcc--CcccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCC----CCc------CC-----Cccccce
Q psy1363 477 TSSL--THDYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFR----ETY------QG-----HLEERLP 539 (756)
Q Consensus 477 ~~~~--~Hdy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r----~t~------~G-----~~E~rvP 539 (756)
.... .|...+.+..-|..++++++.|.....+++|+||++=|-+..+-++- ... .| .+-.|||
T Consensus 263 p~~~~d~Hp~~~~~~~gd~~l~~vv~ai~~sp~W~~T~iiIt~DE~gG~~DHV~pp~~~~~~~~~~~g~~~~~g~G~RVP 342 (376)
T PF04185_consen 263 PNMCNDMHPPYSVIADGDAFLARVVEAIRNSPYWKNTAIIITYDENGGFYDHVPPPRSPVPNPDEWVGPFGFDGLGPRVP 342 (376)
T ss_dssp --GGGS--TTT--HHHHHHHHHHHHHHHHCSTTGGGEEEEEEES--TT----------TTTT------STT------B--
T ss_pred ecCcCCCCCCCCchhHHHHHHHHHHHHHhcCcCcCCeEEEEEEecCCCcCCCCCCCCCCccccccccccCCCCCccccCC
Confidence 6432 36566667899999999999999999999999999988765432221 110 01 1235999
Q ss_pred eEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCC
Q psy1363 540 FLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVS 584 (756)
Q Consensus 540 ~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~ 584 (756)
+|+| .+|.|+.+ + .+...+|+-|..||.++.|++
T Consensus 343 ~ivI--SP~~k~G~--------v-~~~~ydh~Silrtie~~~gLP 376 (376)
T PF04185_consen 343 AIVI--SPYAKGGT--------V-DHTPYDHTSILRTIEERFGLP 376 (376)
T ss_dssp EEEE--STTB-TTE--------E-E---EETHHHHHHHHHHHT--
T ss_pred eEEe--CCCCCCCc--------E-eCCccchhHHHHHHHHHhCCC
Confidence 9843 45655432 2 245888999999999999874
No 36
>TIGR03368 cellulose_yhjU cellulose synthase operon protein YhjU. This protein was identified by the partial phylogenetic profiling algorithm (PubMed:16930487) as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions. The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation (PubMed:11929533).
Probab=96.60 E-value=0.031 Score=63.27 Aligned_cols=222 Identities=17% Similarity=0.198 Sum_probs=125.6
Q ss_pred CCCCeEEEEEEcCCCchhhhhh-hhhHHHHHHhhcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCCCCCCCCC
Q psy1363 302 EPEYSVLVVGIDAVSRQNFLRQ-MSRTYKYLDTHYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPTPESTFDD 380 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~R~-mPkT~~fL~~~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~~~~~ld~ 380 (756)
..+..||||-|=|+|++++.-. +.+ ...+++ . -+.|.+||+...-+=|+.+=||-+.-.++-...... .-..
T Consensus 191 aq~FDllvlnICSLSWdDl~aa~l~~-hPl~~~-F-DilF~nFnSAtSYSGPAaIRlLRASCGQ~~H~~LY~----pa~~ 263 (518)
T TIGR03368 191 AQQFDLLVLNICSLSWDDLEAAGLRN-HPLLSR-F-DILFDNFNSATSYSGPAAIRLLRASCGQESHADLYD----PAPE 263 (518)
T ss_pred CCCcCEEEEEeccCcHHHHHHhcCcc-CchHHh-h-cchhhccccccccchHHHHHHHHhccCCcchHhhcC----Cccc
Confidence 5679999999999999998642 211 222333 2 246889999888888888888876544322211111 0123
Q ss_pred hhHHHHHHHHCCCeEEeeccCCCCCCCC-cC----CCC-CCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHH
Q psy1363 381 CPFLWKNFSAAGFKTLYAEDSFGMSTFN-YF----KSG-FAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKT 454 (756)
Q Consensus 381 ~p~Iw~~fk~aGY~T~~~eD~~~~g~F~-y~----~~G-F~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~ 454 (756)
.=.|++.|+++||++-..-+-. |.|+ |. ..| -..++.+.-.-|-. ...+++.. -+..-.
T Consensus 264 qCyLF~nLa~lGf~~~l~lnHd--G~Fd~fl~~ir~~G~~~~pl~~~~g~~~~---------~~aFDGSp----Iy~D~~ 328 (518)
T TIGR03368 264 QCHLFSNLAKLGFTENLLLNHD--GHFDNFLQLVRENGGMQSPLMSQTGLPVA---------QRSFDGSP----IYDDYA 328 (518)
T ss_pred cchHHHHHHHcCCchhhcccCC--CccchHHHHHHHcCCCCCCCcCccCCcHH---------HhccCCCc----ccchHH
Confidence 3479999999999975443321 3231 00 011 11111110000000 00011100 111223
Q ss_pred HHHHHHHHHHHhcCCceEEEEecCccCcc--------------cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCC
Q psy1363 455 VLEYALKYTSALRNYFYFAFVWTSSLTHD--------------YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHG 520 (756)
Q Consensus 455 lldy~~~Fi~~~~~~PfF~~~w~~~~~Hd--------------y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG 520 (756)
+++.|.+=-++-.+.|--.|+-+.++ || |......+=+++.+|++.|+++| .+.+|++.--||
T Consensus 329 vL~rW~~~r~~~~~~~vA~~YNtIsL-HDGNr~~g~~~~s~~sY~~Ra~kLlddld~F~~~le~Sg--R~vvVv~VPEHG 405 (518)
T TIGR03368 329 VLNRWLQERLGEPDGPVALYYNTISL-HDGNRIPNSGMTSLASYPLRAKKLLDDLDRFFDELEKSG--RKVVVVLVPEHG 405 (518)
T ss_pred HHHHHHHHhhcCCCCceEEEEeeeec-ccCCcCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEecCcc
Confidence 44544321112233455554433322 43 44456667778999999999998 899999999999
Q ss_pred CCCCCCCCCcCCCccccceeEEEEcCccc
Q psy1363 521 LRWGDFRETYQGHLEERLPFLFFIMPQTF 549 (756)
Q Consensus 521 ~r~g~~r~t~~G~~E~rvP~l~I~~P~~~ 549 (756)
...-+-++--.|+.|.--|-| +++|-.+
T Consensus 406 AAlrGDk~QisGLREIPsP~I-thvPVGi 433 (518)
T TIGR03368 406 AALRGDKMQISGLREIPSPSI-THVPVGV 433 (518)
T ss_pred hhcccchhhhccccCCCCCcc-cccceEE
Confidence 866444555678889877777 6777543
No 37
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=96.13 E-value=0.014 Score=65.77 Aligned_cols=127 Identities=18% Similarity=0.205 Sum_probs=78.5
Q ss_pred cchhHHHHHHHHHHHHHHhcCCceEEEEecCc--cCc-----ccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCC
Q psy1363 448 SQLIFKTVLEYALKYTSALRNYFYFAFVWTSS--LTH-----DYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHG 520 (756)
Q Consensus 448 ~~~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~--~~H-----dy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG 520 (756)
+..+...+.|....-++.. +...+.+-+.+. ..| .....+..+|..++++++.+++ .+-.+++|+|||
T Consensus 369 PEMSa~evtd~~~~~i~~g-~~D~iV~N~ANpDMVGHTG~~eatiKAvEavD~~lg~ivd~~~~----~gg~~~iTaDHG 443 (509)
T COG0696 369 PEMSAKEVTDALVEAIEKG-KYDLIVLNYANPDMVGHTGNFEATIKAVEAVDECLGRIVDAVKK----NGGTLLITADHG 443 (509)
T ss_pred cccchHHHHHHHHHHHhCC-CCCEEEEecCCCccCcccccHHHHHHHHHHHHHHHHHHHHHHHh----cCCeEEEeecCc
Confidence 3444455556655544432 235666555442 234 2356789999999999999988 456789999999
Q ss_pred CCCCCCCCCcCCCcc-----ccceeEEEEcC-cccccccccccccccccccceeecccHHHHHHHhhCCCCCchhhhccC
Q psy1363 521 LRWGDFRETYQGHLE-----ERLPFLFFIMP-QTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSLKDELLRQD 594 (756)
Q Consensus 521 ~r~g~~r~t~~G~~E-----~rvP~l~I~~P-~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~~~~~~~~~ 594 (756)
..- ......|.-+ ..||++ ... +.+ ..... -..-||+||+++|||++.|.
T Consensus 444 NaE--~m~d~~g~p~TaHT~npVp~i--~~~~~~v-----------~~~~~--g~LadiAPTiL~llg~~~P~------- 499 (509)
T COG0696 444 NAE--QMSDPAGNPHTAHTTNPVPVI--YTGKKGV-----------KARKS--GKLADIAPTILDLLGLEIPA------- 499 (509)
T ss_pred chh--hccCCCCCceeccccCCccEE--EEcCCcc-----------eeeec--cchhhhhHHHHHHcCCCcch-------
Confidence 732 1122222222 267776 343 222 11111 55679999999999998643
Q ss_pred CCCCCCCCCCcccCCc
Q psy1363 595 RGPDKDNIPRGISLFR 610 (756)
Q Consensus 595 ~~~~~~~~~~g~SLF~ 610 (756)
...|.|||.
T Consensus 500 -------eMtgksl~~ 508 (509)
T COG0696 500 -------EMTGKSLII 508 (509)
T ss_pred -------hhccccccc
Confidence 347888875
No 38
>KOG4513|consensus
Probab=94.57 E-value=0.55 Score=51.62 Aligned_cols=91 Identities=16% Similarity=0.157 Sum_probs=59.9
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCcCCCc----cccceeEEEEcCcccccccccccccc
Q psy1363 485 LNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETYQGHL----EERLPFLFFIMPQTFKTKYRVAYSNL 560 (756)
Q Consensus 485 ~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~~G~~----E~rvP~l~I~~P~~~r~~~P~~~~nL 560 (756)
.......|..+++++++.++. .-+.++|+|||..-. ......|.+ -.+||+. |.-|+-.+.- ..
T Consensus 428 v~AcEatD~aig~Iy~A~~~~----~y~lvvTADHGNAEk-Mv~~dgGk~tsHT~~~VPl~-i~~pg~~~g~------~f 495 (531)
T KOG4513|consen 428 VVACEATDEAIGKIYDAIEQV----GYILVVTADHGNAEK-MVKRDGGKLTSHTLKPVPLA-IGGPGLVKGV------RF 495 (531)
T ss_pred hhHHHHHHHHHHHHHHHHHhc----CcEEEEEcCCCCHHH-hccCCCCccccccccccceE-ecCCccccce------ee
Confidence 346688999999999999884 568899999998421 000112322 2489998 7777543321 01
Q ss_pred cccccceeecccHHHHHHHhhCCCCCc
Q psy1363 561 LYNQHRLTTPYDLHETFKDLIDVSSLK 587 (756)
Q Consensus 561 ~~N~~rL~S~~Dl~~TL~~llg~~~~~ 587 (756)
..-.++--+.-|++||.+.|.|++.|+
T Consensus 496 ~~~~dt~p~L~dVApTVl~imG~p~Ps 522 (531)
T KOG4513|consen 496 RGDVDTDPGLADVAPTVLNIMGFPAPS 522 (531)
T ss_pred ccccccCchhhhhhHHHHHHhCCCCcc
Confidence 111233345689999999999998654
No 39
>PF08665 PglZ: PglZ domain; InterPro: IPR013973 This entry is a member of the Alkaline phosphatase clan.
Probab=92.92 E-value=1.1 Score=44.93 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=39.0
Q ss_pred EEEEEEcCCCchhhhhhhhhHHHHHHhhcCcEEe---ccccccCCCCchhhhhhhcCCCcccc
Q psy1363 307 VLVVGIDAVSRQNFLRQMSRTYKYLDTHYELVDM---RGYNKIGDNTFPNLVAALTGMSEKEL 366 (756)
Q Consensus 307 VliI~iDSlSr~~f~R~mPkT~~fL~~~~~~~~f---~gyn~vg~~T~pnl~aLlTG~~~~~~ 366 (756)
|++|++|.||......-.+ .|++ .+++++ ..+......|.-++.|||.|..+...
T Consensus 3 v~liv~Dgmrye~~~eL~~----~L~~-~~~~~~~~~~~~a~LPS~T~~sr~ALl~g~~~~~~ 60 (181)
T PF08665_consen 3 VALIVSDGMRYEQARELAE----SLSR-EGWFEVELDPALAWLPSITEVSRAALLPGKLPRYF 60 (181)
T ss_pred EEEEEEcCCCHHHHHHHHH----HHhh-ccCcceeeeeeeEeccchhHHHHHHHcCCCChhhh
Confidence 7899999999998865443 3343 233222 45566777899999999999987543
No 40
>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional
Probab=91.30 E-value=1.1 Score=51.09 Aligned_cols=101 Identities=19% Similarity=0.271 Sum_probs=62.0
Q ss_pred ceEEEEecCc---cCcc-----cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCcCCCccccceeE
Q psy1363 470 FYFAFVWTSS---LTHD-----YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETYQGHLEERLPFL 541 (756)
Q Consensus 470 PfF~~~w~~~---~~Hd-----y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~~G~~E~rvP~l 541 (756)
.=|.++.+.. ..|+ +...+..+|..++++++.++. +++++|+|||||...+ .+ ++--+-||++
T Consensus 294 ~Dfv~vh~~~~D~~GH~gd~~~k~~aiE~iD~~l~~il~~l~~----~~~~liITaDHgtp~~-~~----~HT~~pVP~i 364 (412)
T PRK04024 294 YDFVLLNIKGTDEAGHDGDFEGKVEVIEKIDKMLGYILDNLDL----DEVYIAVTGDHSTPVE-VK----DHSGDPVPIL 364 (412)
T ss_pred CCEEEEeccCcchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhc----CCCEEEEecCCCCCcc-cc----cCCCCCEeEE
Confidence 3466665433 3553 567899999999999999853 4679999999998431 11 2223469999
Q ss_pred EEEcCccccc----ccccccccccccccceeecccHHHHHHHhhCC
Q psy1363 542 FFIMPQTFKT----KYRVAYSNLLYNQHRLTTPYDLHETFKDLIDV 583 (756)
Q Consensus 542 ~I~~P~~~r~----~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~ 583 (756)
|+-|.. +. .|-|. ...+-. -......||++.++++++.
T Consensus 365 -i~g~~v-~~d~~~~f~E~-~~~~g~-l~~~~g~~lm~~~l~~~~~ 406 (412)
T PRK04024 365 -IYGPGV-RVDDVEKFNEL-SAAKGG-LGRIRGLDVMPILLDLMNR 406 (412)
T ss_pred -EEcCCc-cCCCCCccCHH-HHhCCC-CCcccHHHHHHHHHHHhch
Confidence 666653 32 11111 011110 1134567999999887664
No 41
>PRK10518 alkaline phosphatase; Provisional
Probab=90.91 E-value=0.54 Score=54.17 Aligned_cols=70 Identities=20% Similarity=0.195 Sum_probs=52.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCceEEEEecCcc---Cccc-----CChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCC
Q psy1363 450 LIFKTVLEYALKYTSALRNYFYFAFVWTSSL---THDY-----LNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGL 521 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~~---~Hdy-----~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~ 521 (756)
+.-..+.+.+.+++++ .++.||+++-.... .|.. ...+..+|+.++..++..++. +||+||+|+||++
T Consensus 324 PsLaeMT~kAI~~Lsk-n~~GFFLmVEGg~ID~a~H~nda~~~i~E~~~fD~AV~~A~~~~~~~---~dTLVIVTADH~h 399 (476)
T PRK10518 324 PTLAQMTDKAIDLLKK-NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQKALEFARKD---GNTLVIVTADHAH 399 (476)
T ss_pred CCHHHHHHHHHHHhcc-CCCceEEEeeccccchhhccCCHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEEEccCCC
Confidence 4556788889998865 56789999855443 3421 234566899999999998776 5999999999998
Q ss_pred CC
Q psy1363 522 RW 523 (756)
Q Consensus 522 r~ 523 (756)
.+
T Consensus 400 ~~ 401 (476)
T PRK10518 400 SS 401 (476)
T ss_pred cc
Confidence 54
No 42
>smart00098 alkPPc Alkaline phosphatase homologues.
Probab=89.54 E-value=0.79 Score=52.18 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCceEEEEecCcc---Cccc-----CChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCC
Q psy1363 450 LIFKTVLEYALKYTSALRNYFYFAFVWTSSL---THDY-----LNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGL 521 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~~---~Hdy-----~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~ 521 (756)
+.-..+.+.+.+.+++ .++.||.++-.... .|.. ...+..+|+.++..++..++ .++|+||+|+||+.
T Consensus 234 PsL~eMt~~Al~~L~~-~~~GFfLmVEgg~ID~a~H~nd~~~~i~E~~~fd~AV~~a~~~~~~---~~dTLiiVTADH~~ 309 (419)
T smart00098 234 PSLAEMTEVAIRLLSK-NERGFFLMVEGGRIDHAHHENDACGALHETVDFDQAIQAALEFAKK---EDETLVIVTADHSH 309 (419)
T ss_pred CCHHHHHHHHHHHhhc-CCCceEEEEecccCChhhccCCHHHHHHHHHHHHHHHHHHHHHhhC---CCCcEEEEEecCCC
Confidence 4556788888888865 46799999854433 3421 33556789999999998876 48999999999997
Q ss_pred C
Q psy1363 522 R 522 (756)
Q Consensus 522 r 522 (756)
.
T Consensus 310 g 310 (419)
T smart00098 310 V 310 (419)
T ss_pred c
Confidence 4
No 43
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.
Probab=87.60 E-value=11 Score=45.83 Aligned_cols=231 Identities=15% Similarity=0.149 Sum_probs=124.1
Q ss_pred hhhhHHHHHHhhcCcEEec-cccccCCCCchhhhhhhcCCCcccccc----ccCCCCC------CCCCChhHHHHHHHHC
Q psy1363 323 QMSRTYKYLDTHYELVDMR-GYNKIGDNTFPNLVAALTGMSEKELEQ----TCYPTPE------STFDDCPFLWKNFSAA 391 (756)
Q Consensus 323 ~mPkT~~fL~~~~~~~~f~-gyn~vg~~T~pnl~aLlTG~~~~~~~~----~~~~~~~------~~ld~~p~Iw~~fk~a 391 (756)
.+|-.+.+.++ ...+. .|.++-..|.||++-++||........ ..+.... ..--.+++|++.|.++
T Consensus 148 dlPf~~aLAda---FTvcD~yf~S~~g~T~PNR~~~~sGt~~~~~~~~~~~~~n~~~~~~~~~~~~~~~w~Ti~e~L~~a 224 (690)
T TIGR03396 148 DIPFQYALADA---FTICDAYHCSVQGGTNPNRLYLWTGTNGPLGGAGGPAVTNDDDWPGIGPGEGGYTWTTYPERLEQA 224 (690)
T ss_pred ccHHHHHHHHH---hhhhhhhcccCCCCCCcCceeeEecccCCcccCCcceecCCccccccccccCCCCcCcHHHHHHhC
Confidence 47766665555 33344 345677889999999999988643111 1111000 0012578999999999
Q ss_pred CCeEEeeccCCCCCCCCcCCCCCCCCCCCCCcchhhhhhhhhcccccccCCcccCCcchhHHHHHHHHHHHHHHh--cCC
Q psy1363 392 GFKTLYAEDSFGMSTFNYFKSGFAKSPTDTFYNIFSKESEAVIGNTKILNAHLCMGSQLIFKTVLEYALKYTSAL--RNY 469 (756)
Q Consensus 392 GY~T~~~eD~~~~g~F~y~~~GF~~~p~Dhy~rp~~~~~e~~~~~~~~~~~~~C~g~~~~~~~lldy~~~Fi~~~--~~~ 469 (756)
|-.=.+..+. ...|...|..+ ++.|-.... . ..+.....+.+... ..+...+|.+.- ..-
T Consensus 225 GVSWkvYq~~---------~~n~~dnpl~~-F~~~~~~~~-----~-~~~~~~~~~~~~~~--~~~~~~~f~~Dv~~g~L 286 (690)
T TIGR03396 225 GVSWKVYQDM---------NDNFTDNPLAG-FKQFRNASS-----D-NPGSPLYLGARGMS--TRDLLDQLRADVQAGTL 286 (690)
T ss_pred CCcEEEEecC---------CCccccchhHH-HHHHhhhhc-----c-CCCchhhhcccCcc--cccHHHHHHHHHHcCCC
Confidence 9662222111 11222222110 111110000 0 00000000000000 011223444332 346
Q ss_pred ceEEEEecCcc--CcccCChhHHHHHHHHHHHHHHHhCC-CCCCEEEEEEcCCCCCCCCCC-------------------
Q psy1363 470 FYFAFVWTSSL--THDYLNLPRLGDSILQKFVKNLNKNG-HLNRTILILTSDHGLRWGDFR------------------- 527 (756)
Q Consensus 470 PfF~~~w~~~~--~Hdy~~~i~~lD~~l~~~L~~L~~~g-lldNTiVIf~SDHG~r~g~~r------------------- 527 (756)
|-++|+-.... -|.- ..+..-+.-+.++++.|.... ++++|++|++=|-+.-|-+|-
T Consensus 287 P~VS~I~p~~~~seHP~-~~~~~G~~~i~~vl~aL~~nP~vW~~TvliItyDE~gGffDHV~PP~~p~~~~~~~~~g~~t 365 (690)
T TIGR03396 287 PQVSWIVAPAAYSEHPG-SSPAYGAWYVSRVLDALTANPEVWSKTVLLLNYDENDGFFDHVPPPVPPSYNADGTSAGKST 365 (690)
T ss_pred CeEEEEecCCCCCCCCC-CChHHHHHHHHHHHHHHHhChhhhhceEEEEEEeCCCCcccCcCCCCCCCcccccccccccc
Confidence 99998854332 2433 677888899999999999887 699999999988765332110
Q ss_pred -CCc------------CC---CccccceeEEEEcCcccccccccccccccccccceeecccHHHHHHHhhCCCCC
Q psy1363 528 -ETY------------QG---HLEERLPFLFFIMPQTFKTKYRVAYSNLLYNQHRLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 528 -~t~------------~G---~~E~rvP~l~I~~P~~~r~~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg~~~~ 586 (756)
.+. .| .+-.|||+++ +.+|.|..+ ++ .....|.-+..+|.+..|+..+
T Consensus 366 ~~~~~e~~~~~~~~~~~~~p~GlG~RVP~iV--ISPwsrgG~--------V~-s~~~DHtSvLrflE~~fgl~~~ 429 (690)
T TIGR03396 366 LDTAGEYFDVPDPAEARGRPIGLGPRVPMYV--ISPWSKGGW--------VN-SQVFDHTSVLRFLEKRFGVREP 429 (690)
T ss_pred cCCCccccccccccccccCcCCccceeeEEE--ECCCCCCCc--------cc-CccccHHHHHHHHHHHhCCCCc
Confidence 000 00 1234999984 456766442 23 4567788888999898888753
No 44
>PF07394 DUF1501: Protein of unknown function (DUF1501); InterPro: IPR010869 This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.
Probab=87.07 E-value=1.1 Score=50.50 Aligned_cols=93 Identities=19% Similarity=0.150 Sum_probs=64.4
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCC--CCc-CCCccccceeEEEEcCccccc-----ccccc
Q psy1363 485 LNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFR--ETY-QGHLEERLPFLFFIMPQTFKT-----KYRVA 556 (756)
Q Consensus 485 ~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r--~t~-~G~~E~rvP~l~I~~P~~~r~-----~~P~~ 556 (756)
...+..+|+.|..|++.|++.|++|+|+||.+||=|-+..... +|. +|. --+++ .+-+.++. ++|+.
T Consensus 267 ~~ll~~L~~alaaf~~dL~~~g~~d~t~vv~~SEFGRt~~~N~~~GtDH~g~---g~~~~--v~GGgv~gG~v~G~~p~l 341 (392)
T PF07394_consen 267 ARLLPELDQALAAFIQDLKERGLLDDTLVVTMSEFGRTPRENGSGGTDHWGW---GGSML--VAGGGVKGGRVYGETPSL 341 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcCceEEEEeeecCCCcccCCCCCCCCCCC---cceEE--EeCCCcCCCcEeCCCCCc
Confidence 4577999999999999999999999999999999998654321 111 121 23555 23444443 24543
Q ss_pred cccccccccceeecccHHHHHHHhhCCCC
Q psy1363 557 YSNLLYNQHRLTTPYDLHETFKDLIDVSS 585 (756)
Q Consensus 557 ~~nL~~N~~rL~S~~Dl~~TL~~llg~~~ 585 (756)
-. ...++.+++-|+++|+...+++..
T Consensus 342 ~~---~~~~~~~~~~dl~~t~~~~~~~d~ 367 (392)
T PF07394_consen 342 GE---DPLDNPVSPRDLYATRLLPLGIDP 367 (392)
T ss_pred cc---ccccCCcChhhccCCeeeccccCh
Confidence 22 123467999999999988888763
No 45
>PF00245 Alk_phosphatase: Alkaline phosphatase; InterPro: IPR001952 This entry represents alkaline phosphatases (3.1.3.1 from EC) (ALP), which act as non-specific phosphomonoesterases to hydrolyse phosphate esters, optimally at high pH. The reaction mechanism involves the attack of a serine alkoxide on a phosphorus of the substrate to form a transient covalent enzyme-phosphate complex, followed by the hydrolysis of the serine phosphate. Alkaline phosphatases are found in all kingdoms of life, with the exception of some plants. Alkaline phosphatases are metalloenzymes that exist as a dimer, each monomer binding metal ions. The metal ions they carry can differ, although zinc and magnesium are the most common. For example, Escherichia coli alkaline phosphatase (encoded by phoA) requires the presence of two zinc ions bound at the M1 and M2 metal sites, and one magnesium ion bound at the M3 site []. However, alkaline phosphatases from Thermotoga maritima and Bacillus subtilis require cobalt for maximal activity []. In mammals, there are four alkaline phosphatase isozymes: placental, placental-like (germ cell), intestinal and tissue-nonspecific (liver/bone/kidney). All four isozymes are anchored to the outer surface of the plasma membrane by a covalently attached glycosylphosphatidylinositol (GPI) anchor []. Human alkaline phosphatases have four metal binding sites: two for zinc, one for magnesium, and one for calcium ion. Placental alkaline phosphatase (ALPP or PLAP) is highly polymorphic, with at least three common alleles []. Its activity is down-regulated by a number of effectors such as l-phenylalanine, 5'-AMP, and by p-nitrophenyl-phosphonate (PNPPate) []. The placental-like isozyme (ALPPL or PLAP-like) is elevated in germ cell tumours. The intestinal isozyme (ALPI or IAP) has the ability to detoxify lipopolysaccharide and prevent bacterial invasion across the gut mucosal barrier []. The tissue-nonspecific isozyme (ALPL) is, and may play a role in skeletal mineralisation. Defects in ALPL are a cause of hypophosphatasia, including infantile-type (OMIM:241500), childhood-type (OMIM:241510) and adult-type (OMIM:146300). Hhypophosphatasia is an inherited metabolic bone disease characterised by defective skeletal mineralisation []. This entry also contains the related enzyme streptomycin-6-phosphate phosphatase (3.1.3.39 from EC) (encoded by strK) from Streptomyces species. This enzyme is involved in the synthesis of the antibiotic streptomycin, specifically cleaving both streptomycin-6-phosphate and, more slowly, streptomycin-3-phosphate [].; GO: 0016791 phosphatase activity, 0008152 metabolic process; PDB: 1AJD_B 1ALH_B 2ANH_B 3BDF_A 1ELZ_B 1ELX_B 1B8J_B 2GA3_A 1ANJ_B 1Y6V_B ....
Probab=85.42 E-value=1.1 Score=51.07 Aligned_cols=69 Identities=20% Similarity=0.195 Sum_probs=50.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCceEEEEecCcc---Ccc-----cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCC
Q psy1363 450 LIFKTVLEYALKYTSALRNYFYFAFVWTSSL---THD-----YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGL 521 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~~---~Hd-----y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~ 521 (756)
+.-..+.+.+.+++++ .++.||+++-.... .|. -...+...|+.++..++..++. +||+||+|+||+.
T Consensus 237 PsL~eMt~~Al~~L~~-~~~GFfLmVEg~~ID~a~H~nd~~~~i~E~~~fD~AV~~a~~~~~~~---~~TLiIVTADHet 312 (421)
T PF00245_consen 237 PSLAEMTEKALEVLSK-NPKGFFLMVEGGRIDWAGHANDAARAIEETLEFDDAVKVALDFAEKD---DDTLIIVTADHET 312 (421)
T ss_dssp THHHHHHHHHHHHHTT-STT-EEEEEEETHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHC---SSEEEEEEESSEE
T ss_pred CCHHHHHHHHHHHHhh-CCCCcEEEecccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHhccC---CCeEEEEEecccC
Confidence 3446788888888875 34799999854432 232 1345677899999999998754 9999999999997
Q ss_pred C
Q psy1363 522 R 522 (756)
Q Consensus 522 r 522 (756)
.
T Consensus 313 g 313 (421)
T PF00245_consen 313 G 313 (421)
T ss_dssp S
T ss_pred c
Confidence 5
No 46
>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form. This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).
Probab=80.59 E-value=3.6 Score=46.68 Aligned_cols=54 Identities=24% Similarity=0.289 Sum_probs=38.6
Q ss_pred cCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCcCCCccccceeEEEEcCc
Q psy1363 484 YLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETYQGHLEERLPFLFFIMPQ 547 (756)
Q Consensus 484 y~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~~G~~E~rvP~l~I~~P~ 547 (756)
....+..+|..+.+.++.|+. ++.++|+|||||.... .+ ++--+-||++ |+-|+
T Consensus 310 k~~aIE~iD~~l~~~l~~l~~----~~~~liiTaDHgtp~~-~~----~Ht~~pVP~i-i~g~~ 363 (396)
T TIGR00306 310 KVRAIEKIDSKIVGPLLALDL----DETRLILTADHSTPVE-VK----DHSADPVPIV-IVGPG 363 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhhh----CCCEEEEeCCCCCCCC-CC----CCCCCCeeEE-EEeCC
Confidence 456899999999999988854 5669999999998532 11 1222369998 55444
No 47
>PF00031 Cystatin: Cystatin domain; InterPro: IPR000010 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. The cystatins are cysteine proteinase inhibitors belonging to MEROPS inhibitor family I25, clan IH [, , ]. They mainly inhibit peptidases belonging to peptidase families C1 (papain family) and C13 (legumain family). The cystatin family includes: The Type 1 cystatins, which are intracellular cystatins that are present in the cytosol of many cell types, but can also appear in body fluids at significant concentrations. They are single-chain polypeptides of about 100 residues, which have neither disulphide bonds nor carbohydrate side chains. The Type 2 cystatins, which are mainly extracellular secreted polypeptides synthesised with a 19-28 residue signal peptide. They are broadly distributed and found in most body fluids. The Type 3 cystatins, which are multidomain proteins. The mammalian representatives of this group are the kininogens. There are three different kininogens in mammals: H- (high molecular mass, IPR002395 from INTERPRO) and L- (low molecular mass) kininogen which are found in a number of species, and T-kininogen that is found only in rat. Unclassified cystatins. These are cystatin-like proteins found in a range of organisms: plant phytocystatins, fetuin in mammals, insect cystatins and a puff adder venom cystatin which inhibits metalloproteases of the MEROPS peptidase family M12 (astacin/adamalysin). Also a number of the cystatins-like proteins have been shown to be devoid of inhibitory activity. All true cystatins inhibit cysteine peptidases of the papain family (MEROPS peptidase family C1), and some also inhibit legumain family enzymes (MEROPS peptidase family C13). These peptidases play key roles in physiological processes, such as intracellular protein degradation (cathepsins B, H and L), are pivotal in the remodelling of bone (cathepsin K), and may be important in the control of antigen presentation (cathepsin S, mammalian legumain). Moreover, the activities of such peptidases are increased in pathophysiological conditions, such as cancer metastasis and inflammation. Additionally, such peptidases are essential for several pathogenic parasites and bacteria. Thus in animals cystatins not only have capacity to regulate normal body processes and perhaps cause disease when down-regulated, but in other organisms may also participate in defence against biotic and abiotic stress. ; GO: 0004869 cysteine-type endopeptidase inhibitor activity; PDB: 3L0R_B 2W9P_K 2W9Q_A 3S67_A 3QRD_D 1R4C_G 3GAX_A 1TIJ_B 1G96_A 3NX0_A ....
Probab=79.12 E-value=3.7 Score=36.16 Aligned_cols=59 Identities=19% Similarity=0.178 Sum_probs=43.1
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHhhccccccccccccceeeeeeccccccccCCCCCcceeeEEEEEEEecC
Q psy1363 633 KLIRTSLESPTVRELSQTLVSHINEVLLKNLTDKCHQLKVHKILSAQYEQSIFSMSSKTGNWTQRDYTISIVTVPG 708 (756)
Q Consensus 633 ~~~~i~~~~~~~~~~a~~~v~~iN~~l~~~~~~~C~~l~l~~v~~a~~~~~~~~~~~~~~~~~~~~Y~i~~~t~P~ 708 (756)
+.+ ++.+++.++.+|++++..+|+..... ..+.+.+|++|.... .+-..|.|.|.+.++
T Consensus 3 ~~~-~~~~dp~v~~~~~~al~~~N~~~~~~-----~~~~~~~v~~a~~Qv-----------V~G~~Y~i~~~~~~t 61 (94)
T PF00031_consen 3 PSP-VDPNDPEVQEAAEFALDKFNEQSNSG-----YKFKLVKVISATTQV-----------VAGINYYIEFEVGET 61 (94)
T ss_dssp EEE-ECTTSHHHHHHHHHHHHHHHHHSTTS-----EEEEEEEEEEEEEEE-----------SSSEEEEEEEEEEEE
T ss_pred Ccc-CCCCCHHHHHHHHHHHHHHHHhCccc-----CcceeeeeeEEEEee-----------cCCceEEEEEEEEcc
Confidence 344 77789999999999999999877221 367788898886331 122379999888764
No 48
>cd00042 CY Substituted updates: Jan 30, 2002
Probab=76.86 E-value=17 Score=32.72 Aligned_cols=58 Identities=22% Similarity=0.244 Sum_probs=40.9
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHHHhhccccccccccccceeeeeeccccccccCCCCCcceeeEEEEEEEec
Q psy1363 632 NKLIRTSLESPTVRELSQTLVSHINEVLLKNLTDKCHQLKVHKILSAQYEQSIFSMSSKTGNWTQRDYTISIVTVP 707 (756)
Q Consensus 632 ~~~~~i~~~~~~~~~~a~~~v~~iN~~l~~~~~~~C~~l~l~~v~~a~~~~~~~~~~~~~~~~~~~~Y~i~~~t~P 707 (756)
+|.+ ++.+++.++.+|+++++.+|+..... . +.+.+|.++.... .+...|.+.|.+.+
T Consensus 2 g~~~-~~~~d~~~~~~~~~a~~~~N~~~~~~-----~-~~~~~i~~~~~Qv-----------vaG~~y~i~~~~~~ 59 (105)
T cd00042 2 GPSD-IPANDPEVQELADFAVAEYNKKSNDK-----Y-LEFFKVLSAKSQV-----------VAGTNYYITVEAGD 59 (105)
T ss_pred CCcc-CCCCCHHHHHHHHHHHHHHHhhcCcc-----c-eeEEEEEEEEEEE-----------EeeeEEEEEEEEec
Confidence 3455 77788999999999999999866332 1 6788888886331 12356778777764
No 49
>COG1785 PhoA Alkaline phosphatase [Inorganic ion transport and metabolism]
Probab=74.48 E-value=7.4 Score=44.87 Aligned_cols=68 Identities=21% Similarity=0.211 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCceEEEEecCcc---Cccc-----CChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCC
Q psy1363 450 LIFKTVLEYALKYTSALRNYFYFAFVWTSSL---THDY-----LNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGL 521 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~~---~Hdy-----~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~ 521 (756)
+.-..+.+.+.+-+++.+ +.||+++--... .|+. ...+...|+.+...|+.-++. .||+||+|+||-.
T Consensus 280 PsLaeMt~kAi~~L~kn~-~GFFLMVEGg~ID~a~Hand~~~~i~e~~~fd~Avq~al~fA~k~---~~TLVIvTADH~t 355 (482)
T COG1785 280 PSLAEMTEKAIDLLSKNK-KGFFLMVEGGRIDWAGHANDPAGAIGETVAFDEAVQAALDFAEKD---GNTLVIVTADHET 355 (482)
T ss_pred CcHHHHHHHHHHHhccCC-CceEEEEeccccchhhcCcCHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEEeccccC
Confidence 344567777777766544 789999865544 3321 234577899999999887654 8999999999975
No 50
>TIGR02535 hyp_Hser_kinase proposed homoserine kinase. The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.
Probab=70.27 E-value=10 Score=43.12 Aligned_cols=55 Identities=20% Similarity=0.320 Sum_probs=37.9
Q ss_pred CChhHHHHHHHH-HHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCcCCCccccceeEEEEcCc
Q psy1363 485 LNLPRLGDSILQ-KFVKNLNKNGHLNRTILILTSDHGLRWGDFRETYQGHLEERLPFLFFIMPQ 547 (756)
Q Consensus 485 ~~~i~~lD~~l~-~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~~G~~E~rvP~l~I~~P~ 547 (756)
...+..+|..+. .+++.|++.| ++.++++|||||... .. ..+--+-||++ |+-++
T Consensus 308 v~aIE~lD~~~~~~ll~al~~~~--~~~~~~vt~DH~tp~-~~----~~Ht~~pVP~i-i~g~~ 363 (396)
T TIGR02535 308 IKAIELIDSRIVGPLLEALSDRD--EPFRILVLPDHPTPL-EL----KTHTAEPVPFL-LYGKG 363 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CCeEEEEeeeCccCC-CC----CccCCCCEeEE-EEeCC
Confidence 457899999855 7999986543 456999999999632 11 12234579999 55444
No 51
>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional
Probab=66.54 E-value=12 Score=42.39 Aligned_cols=54 Identities=17% Similarity=0.252 Sum_probs=37.0
Q ss_pred CChhHHHHHHHH-HHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCcCCCccccceeEEEEcCc
Q psy1363 485 LNLPRLGDSILQ-KFVKNLNKNGHLNRTILILTSDHGLRWGDFRETYQGHLEERLPFLFFIMPQ 547 (756)
Q Consensus 485 ~~~i~~lD~~l~-~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~~G~~E~rvP~l~I~~P~ 547 (756)
...++.+|..+. .+++.|.+. ++.++++|||||... ..+ .+--.-||++ |+-|+
T Consensus 307 v~aiE~lD~~~~~~ll~al~~~---~~~~l~it~DH~tp~-~~~----~Ht~~pVP~i-i~g~~ 361 (395)
T PRK04200 307 IKAIEDIDERVVGPILEALKKY---EDYRILVLPDHPTPI-ELK----THTADPVPFL-IYGEG 361 (395)
T ss_pred HHHHHHHHHHhHHHHHHHHHhc---CCCEEEEeccCCcCC-CCC----ccCCCCEeEE-EEcCC
Confidence 457899999955 799998652 467899999999633 121 2223479999 55443
No 52
>smart00043 CY Cystatin-like domain. Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.
Probab=63.86 E-value=16 Score=33.09 Aligned_cols=62 Identities=18% Similarity=0.160 Sum_probs=40.6
Q ss_pred ccccccccCCcHHHHHHHHHHHHHHHHHHhhccccccccccccceeeeeeccccccccCCCCCcceeeEEEEEEEecCC
Q psy1363 631 HNKLIRTSLESPTVRELSQTLVSHINEVLLKNLTDKCHQLKVHKILSAQYEQSIFSMSSKTGNWTQRDYTISIVTVPGL 709 (756)
Q Consensus 631 ~~~~~~i~~~~~~~~~~a~~~v~~iN~~l~~~~~~~C~~l~l~~v~~a~~~~~~~~~~~~~~~~~~~~Y~i~~~t~P~~ 709 (756)
.++.+ ++.+++.++.+|+++++.+|+.-... ..+.+.+|.+|... -.+-..|.|.|.+.++.
T Consensus 4 Gg~~~-~~~~d~~~~~~~~~a~~~~N~~~~~~-----~~~~~~~v~~a~~Q-----------vvaG~~y~l~~~v~~t~ 65 (107)
T smart00043 4 GGPSD-VPPNDPEVQEAADFAVAEYNKKSNDK-----YELRVIKVVSAKSQ-----------VVAGTNYYLKVEVGETN 65 (107)
T ss_pred CCCcc-CCCCCHHHHHHHHHHHHHHHHhcccc-----hhhhhhhhheeeee-----------eecceEEEEEEEEEece
Confidence 44555 67788999999999999999864211 12335667766422 12234688888877654
No 53
>KOG2124|consensus
Probab=58.51 E-value=8.1 Score=47.14 Aligned_cols=97 Identities=21% Similarity=0.332 Sum_probs=62.3
Q ss_pred ccCChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCC-CCCCCCCcCCCc-cccceeEEEEcCcccccccccccccc
Q psy1363 483 DYLNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLR-WGDFRETYQGHL-EERLPFLFFIMPQTFKTKYRVAYSNL 560 (756)
Q Consensus 483 dy~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r-~g~~r~t~~G~~-E~rvP~l~I~~P~~~r~~~P~~~~nL 560 (756)
+|.+.+.+.|..+.++.+.+++-=-..+|--|+|+|||.. +|.+.. |.. |.|-|++ .|....| +|.....-
T Consensus 221 ~y~~nl~~~d~~i~~~y~l~e~~fnD~kTayi~TaDhgms~~gsHg~---G~~~~~~TPlv--~WGaGik--~~~~n~~~ 293 (883)
T KOG2124|consen 221 EYRENLKYTDKGIRELYDLFENYFNDGKTAYIFTADHGMSDFGSHGD---GHPENTRTPLV--AWGAGIK--YPVPNSEQ 293 (883)
T ss_pred HHHHHhhcCCccHHHHHHHHHHHhcCCcceEEEehhcccccccccCC---CCcccccChHH--HhcCCCC--ccCCCCCc
Confidence 3677888999988888877776322688999999999984 455443 333 4599987 4666544 34322211
Q ss_pred ccccc-------ceeecccHHHHHHHhhCCCCC
Q psy1363 561 LYNQH-------RLTTPYDLHETFKDLIDVSSL 586 (756)
Q Consensus 561 ~~N~~-------rL~S~~Dl~~TL~~llg~~~~ 586 (756)
..|.. .=+-.-||+|-.-.+.|++.|
T Consensus 294 ~~~~~~~~~~~~~dl~Qa~IApLMS~LiGlp~P 326 (883)
T KOG2124|consen 294 NFDEYSLTEIKRHDLNQADIAPLMSYLIGLPPP 326 (883)
T ss_pred CCccccccccchhhhhHHHHHHHHHHHhCCCCc
Confidence 11100 113456888888888888865
No 54
>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional
Probab=55.58 E-value=19 Score=40.87 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=49.6
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCcCCCccccceeEEEEcCccccc---cccccccccc
Q psy1363 485 LNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETYQGHLEERLPFLFFIMPQTFKT---KYRVAYSNLL 561 (756)
Q Consensus 485 ~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~~G~~E~rvP~l~I~~P~~~r~---~~P~~~~nL~ 561 (756)
...++.+|..+..++ .+ +++.|++||||+.... .+ .+-.+-||++ |+-++.-+. .|-|.- ..+
T Consensus 303 v~~IE~iD~~l~~ll-~l------~~~~ivVT~DH~TP~~-~~----~Hs~dPVP~l-i~g~~~~~D~v~~F~E~~-~~~ 368 (395)
T PRK04135 303 VKVIEEVDALLPEIL-AL------KPDVLVITGDHSTPAV-LK----GHSWHPVPLL-LYSKYCRPDLSQRFTERE-CAR 368 (395)
T ss_pred HHHHHHHHHHHHHHh-cC------CCcEEEEeCCCCCccc-cc----ccCCCCEeEE-EEcCCCCCCCCCccCHHH-HcC
Confidence 357899999999777 54 4559999999998651 11 2234579999 665543221 121110 111
Q ss_pred ccccceeecccHHHHHHHhhC
Q psy1363 562 YNQHRLTTPYDLHETFKDLID 582 (756)
Q Consensus 562 ~N~~rL~S~~Dl~~TL~~llg 582 (756)
- .-.+....||+..++++++
T Consensus 369 G-~L~~~~G~~lm~~~l~~~~ 388 (395)
T PRK04135 369 G-GLGHIPAVDLMPLALAHAL 388 (395)
T ss_pred C-CcCcccHHHHHHHHHHhhh
Confidence 0 1124567888888887655
No 55
>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]
Probab=53.83 E-value=32 Score=38.53 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=59.6
Q ss_pred EEEEecC---ccCccc-----CChhHHHHHHHHHHHHHHHhCCCCCCEEEEEEcCCCCCCCCCCCCcCCCccccceeEEE
Q psy1363 472 FAFVWTS---SLTHDY-----LNLPRLGDSILQKFVKNLNKNGHLNRTILILTSDHGLRWGDFRETYQGHLEERLPFLFF 543 (756)
Q Consensus 472 F~~~w~~---~~~Hdy-----~~~i~~lD~~l~~~L~~L~~~glldNTiVIf~SDHG~r~g~~r~t~~G~~E~rvP~l~I 543 (756)
|.|++.. +..|+- ...+..+|..++.+|+ + -++++++++|+||-.... .. +.. -+-||++ |
T Consensus 299 fv~vhik~tDeagHdG~~e~Kv~~IE~iD~~i~pll~-~----~~~~~~i~vt~DHsTPv~-vk-~Hs---~dPVPil-i 367 (408)
T COG3635 299 FVFVHIKATDEAGHDGDFEGKVRVIEDIDKAIGPLLD-L----DLDEDVIAVTGDHSTPVS-VK-DHS---GDPVPIL-I 367 (408)
T ss_pred EEEEEeccCccccCCCCHHHhHHHHHHHHHHhhhhhc-c----ccCCcEEEEeCCCCCccc-cc-ccC---CCCccEE-E
Confidence 4555543 346651 3478889988888887 2 248999999999986532 11 111 2479999 7
Q ss_pred EcCccccc---ccccccccccccccceeecccHHHHHHHhhC
Q psy1363 544 IMPQTFKT---KYRVAYSNLLYNQHRLTTPYDLHETFKDLID 582 (756)
Q Consensus 544 ~~P~~~r~---~~P~~~~nL~~N~~rL~S~~Dl~~TL~~llg 582 (756)
+-|...+. .|-+. +..+- .--++...||++-|+++++
T Consensus 368 ~~~~v~~D~v~~F~E~-~~~~G-~Lgri~g~dlm~ill~~~~ 407 (408)
T COG3635 368 YGPYVRRDDVKRFDEF-SCARG-SLGRIRGSDLMPILLDLAG 407 (408)
T ss_pred ecCCcccCccceecHh-hhhcC-CcceeehHHHHHHHHHhhc
Confidence 77765222 12111 11110 1125888999999998875
No 56
>smart00098 alkPPc Alkaline phosphatase homologues.
Probab=47.47 E-value=33 Score=39.25 Aligned_cols=93 Identities=15% Similarity=0.084 Sum_probs=51.5
Q ss_pred eEEEEEEcCCCchhhh--hhhhhH---------HHHHHhhcCcEE-ecccc--ccCCCCchhhhhhhcCCCccccccccC
Q psy1363 306 SVLVVGIDAVSRQNFL--RQMSRT---------YKYLDTHYELVD-MRGYN--KIGDNTFPNLVAALTGMSEKELEQTCY 371 (756)
Q Consensus 306 NVliI~iDSlSr~~f~--R~mPkT---------~~fL~~~~~~~~-f~gyn--~vg~~T~pnl~aLlTG~~~~~~~~~~~ 371 (756)
|||++.-|.||..+.. |.+-.- .-.+.+ ....- -.-|. +.-.-+.++..++.||....+-.....
T Consensus 2 NVIl~IgDGMg~~~~taaR~~~~~~~~~~~~~~~l~~d~-~p~~~l~~T~~~d~~vtDSAa~aTA~atG~KT~ng~Igvd 80 (419)
T smart00098 2 NVILFIGDGMGVSTITAARILKGQAGGKLGEETLLAFDQ-FPTGALSKTYNPDYQVTDSAATATAYLCGVKTYNGAIGVD 80 (419)
T ss_pred eEEEEEeCCCCHHHHHHHHHHhcccCCCCccccccchhh-cceeeeeccCCCCCCCCcchhhheehhhcccccCceeeec
Confidence 9999999999987662 322110 000111 11111 11122 111234577789999976543221111
Q ss_pred CCCCCCCCChhHHHHHHHHCCCeEEeeccCC
Q psy1363 372 PTPESTFDDCPFLWKNFSAAGFKTLYAEDSF 402 (756)
Q Consensus 372 ~~~~~~ld~~p~Iw~~fk~aGY~T~~~eD~~ 402 (756)
+. .-...++|.+..|++||.|+.+....
T Consensus 81 ~~---~~~~~~tIle~Ak~~G~~tGiVTT~~ 108 (419)
T smart00098 81 AA---TGKEVPSVLEWAKKAGKSTGLVTTTR 108 (419)
T ss_pred CC---CCCcchhHHHHHHHcCCcEEEEeCcc
Confidence 11 01356899999999999999986654
No 57
>KOG4126|consensus
Probab=47.04 E-value=76 Score=36.97 Aligned_cols=91 Identities=20% Similarity=0.277 Sum_probs=53.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCceEEEEecCcc--CcccCChhHHHHH------HHHHHHHHHHhCCCCCCEEEEEEcCCCC
Q psy1363 450 LIFKTVLEYALKYTSALRNYFYFAFVWTSSL--THDYLNLPRLGDS------ILQKFVKNLNKNGHLNRTILILTSDHGL 521 (756)
Q Consensus 450 ~~~~~lldy~~~Fi~~~~~~PfF~~~w~~~~--~Hdy~~~i~~lD~------~l~~~L~~L~~~glldNTiVIf~SDHG~ 521 (756)
++-+.+.+.+.+-++++ ++=||.|+--... .|..-.....+|+ .+..-++-. .-++|+||+||||.+
T Consensus 325 PsL~eMte~Al~vL~~~-~~GffLfVEGgrID~ghH~~~a~~aL~Et~ef~~Aiq~a~~~t----~~~dTLivvTaDHsh 399 (529)
T KOG4126|consen 325 PSLSEMTEKALEVLSKN-SKGFFLFVEGGRIDHGHHETDARQALDETLEFDKAIQRALELT----SEEDTLIVVTADHSH 399 (529)
T ss_pred CCHHHHHHHHHHHHhhC-CCceEEEEecccccccccccHHHHHHHHHHHHHHHHHHHHHhc----CccCCEEEEeccccc
Confidence 44567788888888775 6678988854322 3333333334443 333333322 348999999999998
Q ss_pred CCC----CCCCCc-CCCcc-----ccceeEEEEc
Q psy1363 522 RWG----DFRETY-QGHLE-----ERLPFLFFIM 545 (756)
Q Consensus 522 r~g----~~r~t~-~G~~E-----~rvP~l~I~~ 545 (756)
.+. +.|.+. .|.-+ +.+|...+.+
T Consensus 400 ~~s~~GYp~Rg~~i~gla~~~~~~d~~py~~L~Y 433 (529)
T KOG4126|consen 400 TFSINGYPLRGSSILGLAPAQHRIDGLPYTTLLY 433 (529)
T ss_pred ceeecCCCcCCCCccccCcccccccCCceeEEEe
Confidence 652 333322 23222 4688876655
No 58
>PRK10518 alkaline phosphatase; Provisional
Probab=45.92 E-value=46 Score=38.70 Aligned_cols=96 Identities=19% Similarity=0.124 Sum_probs=53.8
Q ss_pred CCCCeEEEEEEcCCCchhhh--hhhhh----HHHHHHhhcCcE-Eecccccc--------CCCCchhhhhhhcCCCcccc
Q psy1363 302 EPEYSVLVVGIDAVSRQNFL--RQMSR----TYKYLDTHYELV-DMRGYNKI--------GDNTFPNLVAALTGMSEKEL 366 (756)
Q Consensus 302 ~~~pNVliI~iDSlSr~~f~--R~mPk----T~~fL~~~~~~~-~f~gyn~v--------g~~T~pnl~aLlTG~~~~~~ 366 (756)
.+.-|||++.-|.||-.+.. |.+-. -...+.+ +... ....|+.- =..+.++..++.||....+-
T Consensus 67 ~~aKNVIlfIGDGMg~s~itaaR~~~~g~~G~~~~~d~-lp~~g~~~Tys~d~~~~~~~~VtDSAatATA~aTGvKT~ng 145 (476)
T PRK10518 67 KPAKNVILLIGDGMGDSEITAARNYAEGAGGFFKGIDA-LPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNG 145 (476)
T ss_pred CCCceEEEEEeCCCCHHHHHHHHHHhcCCCCccccccc-cccceeeeeccCCccccCcccccCchHhhHHHhhcccccCC
Confidence 33569999999999987652 32210 0000111 1110 11122211 12356888899999765432
Q ss_pred ccccCCCCCCCCCChhHHHHHHHHCCCeEEeeccCC
Q psy1363 367 EQTCYPTPESTFDDCPFLWKNFSAAGFKTLYAEDSF 402 (756)
Q Consensus 367 ~~~~~~~~~~~ld~~p~Iw~~fk~aGY~T~~~eD~~ 402 (756)
....... -...++|.+..|++||.|+.+....
T Consensus 146 ~IgVd~~----g~~v~TIlE~Ak~~G~aTGiVTT~~ 177 (476)
T PRK10518 146 ALGVDIH----GKDHPTLLELAKAAGKATGNVSTAE 177 (476)
T ss_pred eEeECCC----CCcchhHHHHHHHcCCcEEEEeccc
Confidence 2111111 1346899999999999999886654
No 59
>PF00245 Alk_phosphatase: Alkaline phosphatase; InterPro: IPR001952 This entry represents alkaline phosphatases (3.1.3.1 from EC) (ALP), which act as non-specific phosphomonoesterases to hydrolyse phosphate esters, optimally at high pH. The reaction mechanism involves the attack of a serine alkoxide on a phosphorus of the substrate to form a transient covalent enzyme-phosphate complex, followed by the hydrolysis of the serine phosphate. Alkaline phosphatases are found in all kingdoms of life, with the exception of some plants. Alkaline phosphatases are metalloenzymes that exist as a dimer, each monomer binding metal ions. The metal ions they carry can differ, although zinc and magnesium are the most common. For example, Escherichia coli alkaline phosphatase (encoded by phoA) requires the presence of two zinc ions bound at the M1 and M2 metal sites, and one magnesium ion bound at the M3 site []. However, alkaline phosphatases from Thermotoga maritima and Bacillus subtilis require cobalt for maximal activity []. In mammals, there are four alkaline phosphatase isozymes: placental, placental-like (germ cell), intestinal and tissue-nonspecific (liver/bone/kidney). All four isozymes are anchored to the outer surface of the plasma membrane by a covalently attached glycosylphosphatidylinositol (GPI) anchor []. Human alkaline phosphatases have four metal binding sites: two for zinc, one for magnesium, and one for calcium ion. Placental alkaline phosphatase (ALPP or PLAP) is highly polymorphic, with at least three common alleles []. Its activity is down-regulated by a number of effectors such as l-phenylalanine, 5'-AMP, and by p-nitrophenyl-phosphonate (PNPPate) []. The placental-like isozyme (ALPPL or PLAP-like) is elevated in germ cell tumours. The intestinal isozyme (ALPI or IAP) has the ability to detoxify lipopolysaccharide and prevent bacterial invasion across the gut mucosal barrier []. The tissue-nonspecific isozyme (ALPL) is, and may play a role in skeletal mineralisation. Defects in ALPL are a cause of hypophosphatasia, including infantile-type (OMIM:241500), childhood-type (OMIM:241510) and adult-type (OMIM:146300). Hhypophosphatasia is an inherited metabolic bone disease characterised by defective skeletal mineralisation []. This entry also contains the related enzyme streptomycin-6-phosphate phosphatase (3.1.3.39 from EC) (encoded by strK) from Streptomyces species. This enzyme is involved in the synthesis of the antibiotic streptomycin, specifically cleaving both streptomycin-6-phosphate and, more slowly, streptomycin-3-phosphate [].; GO: 0016791 phosphatase activity, 0008152 metabolic process; PDB: 1AJD_B 1ALH_B 2ANH_B 3BDF_A 1ELZ_B 1ELX_B 1B8J_B 2GA3_A 1ANJ_B 1Y6V_B ....
Probab=40.74 E-value=34 Score=39.22 Aligned_cols=93 Identities=14% Similarity=0.014 Sum_probs=46.7
Q ss_pred eEEEEEEcCCCchhhh--hhhhhHHH--------HHHh--hcCcEEeccccccCCCCchhhhhhhcCCCccccccccCCC
Q psy1363 306 SVLVVGIDAVSRQNFL--RQMSRTYK--------YLDT--HYELVDMRGYNKIGDNTFPNLVAALTGMSEKELEQTCYPT 373 (756)
Q Consensus 306 NVliI~iDSlSr~~f~--R~mPkT~~--------fL~~--~~~~~~f~gyn~vg~~T~pnl~aLlTG~~~~~~~~~~~~~ 373 (756)
|||++.-|.||..+.. |..-.-.. -+.+ ..|.+.-...++.-..+.++..++.||.....-.......
T Consensus 3 NVI~~IgDGmg~~~~taar~~~~~~~~~~~~~~l~~d~~~~~G~~~T~~~d~~vtDSAa~aTA~atG~Kt~n~~igv~~~ 82 (421)
T PF00245_consen 3 NVILFIGDGMGPSQVTAARIYKGGKNGRPGEEFLAMDKFPYVGLVRTYSSDSQVTDSAAAATALATGVKTYNGAIGVDPD 82 (421)
T ss_dssp EEEEEEETT-SHHHHHHHHHHHHHHTTSCTTTSCTGGGSSEEEEEE--ESSSSS--HHHHHHHHHHSS--BTT-BSBETT
T ss_pred eEEEEEeCCCCHHHHHHHHHHHhhccCCcccccchhhhhhccceeecccCCcccCccCCcceEEeeeeeeccCCeeECCC
Confidence 9999999999987662 32211100 0111 0122222222223334567888999998764322111110
Q ss_pred CCCCCCChhHHHHHHHHCCCeEEeeccCC
Q psy1363 374 PESTFDDCPFLWKNFSAAGFKTLYAEDSF 402 (756)
Q Consensus 374 ~~~~ld~~p~Iw~~fk~aGY~T~~~eD~~ 402 (756)
-...++|.+..|++||.|+.+....
T Consensus 83 ----~~~~~ti~e~Ak~~G~~tGvVtT~~ 107 (421)
T PF00245_consen 83 ----GKPLETILELAKEAGKATGVVTTTR 107 (421)
T ss_dssp ----SCB---HHHHHHHTT-EEEEEEEEE
T ss_pred ----CCcchhHHHHHHHhCCeeeeeeccc
Confidence 1256899999999999999987654
No 60
>TIGR01638 Atha_cystat_rel Arabidopsis thaliana cystatin-related protein. This model represents a family similar in sequence and probably homologous to a large family of cysteine proteinase inhibitors, or cystatins, as described by pfam model pfam00031. Cystatins may help plants resist attack by insects.
Probab=37.73 E-value=1.1e+02 Score=27.62 Aligned_cols=64 Identities=13% Similarity=0.120 Sum_probs=44.5
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHhhccccccccccccceeeeeeccccccccCCCCCcceeeEEEEEEEe-cCC----eEE
Q psy1363 638 SLESPTVRELSQTLVSHINEVLLKNLTDKCHQLKVHKILSAQYEQSIFSMSSKTGNWTQRDYTISIVTV-PGL----AIF 712 (756)
Q Consensus 638 ~~~~~~~~~~a~~~v~~iN~~l~~~~~~~C~~l~l~~v~~a~~~~~~~~~~~~~~~~~~~~Y~i~~~t~-P~~----a~F 712 (756)
.++.....++|+.+|+.-|+.- =.+|+|.+|.+|... ......|-|+|.++ +.+ ..|
T Consensus 9 ~T~rd~~~~la~~al~k~N~~~-------~t~lEfV~vVrAn~~-----------~~~g~~~yITF~Ard~~d~p~~e~~ 70 (92)
T TIGR01638 9 ETNRDLLERLSYVASKKYNDTK-------FLNLELVEVVRANYR-----------GGAKSKSYITFEARDKPDGPLGEYQ 70 (92)
T ss_pred cCHHHHHHHHHHHHHHHhhhhc-------CceEEEEEEEEEEee-----------ccceEEEEEEEEEecCCCCCHHHhh
Confidence 4455678899999999988643 256889899888644 12346788999886 223 347
Q ss_pred EEEEEEE
Q psy1363 713 ESTMRYD 719 (756)
Q Consensus 713 EatV~~~ 719 (756)
++.|++-
T Consensus 71 q~~v~~~ 77 (92)
T TIGR01638 71 QAAVVYL 77 (92)
T ss_pred heeeEec
Confidence 7777764
No 61
>PF07430 PP1: Phloem filament protein PP1; InterPro: IPR009994 This domain represents a conserved region approximately 200 residues long, four copies of which are found within the plant phloem filament protein PP1. This is one of the constituents of the proteinaceous filaments found in the sieve elements of Cucurbita phloem [].
Probab=32.22 E-value=2.2e+02 Score=29.17 Aligned_cols=66 Identities=27% Similarity=0.399 Sum_probs=46.9
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHhhccccccccccccceeeeeeccccccccCCCCCcceeeEEEEEEEecC---CeEEEE
Q psy1363 638 SLESPTVRELSQTLVSHINEVLLKNLTDKCHQLKVHKILSAQYEQSIFSMSSKTGNWTQRDYTISIVTVPG---LAIFES 714 (756)
Q Consensus 638 ~~~~~~~~~~a~~~v~~iN~~l~~~~~~~C~~l~l~~v~~a~~~~~~~~~~~~~~~~~~~~Y~i~~~t~P~---~a~FEa 714 (756)
..+.+.++.+|+++|..=| +.+ ..|++.+|.+..... ..+. ...|++.+.++-+ .+.|||
T Consensus 122 nin~p~VQeLgkFAV~EhN---K~g-----d~LkF~KV~eGw~q~--------l~~d-~ikYrLhI~AkDg~G~~~~YeA 184 (202)
T PF07430_consen 122 NINNPFVQELGKFAVIEHN---KAG-----DKLKFEKVYEGWYQD--------LGND-GIKYRLHIVAKDGLGRLGNYEA 184 (202)
T ss_pred CCCcHHHHHHHHHHHHHHh---hcC-----CceEEEEEeeEEEEe--------ccCC-CceEEEEEEeecCCCCcCceEE
Confidence 3467899999999999887 222 278888888885320 0111 1349999999866 477999
Q ss_pred EEEEEc
Q psy1363 715 TMRYDL 720 (756)
Q Consensus 715 tV~~~~ 720 (756)
.|-...
T Consensus 185 vV~~k~ 190 (202)
T PF07430_consen 185 VVWEKQ 190 (202)
T ss_pred EEEEec
Confidence 998764
No 62
>KOG4126|consensus
Probab=23.91 E-value=1.4e+02 Score=34.90 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=54.3
Q ss_pred CCCeEEEEEEcCCCchhh--hhhhhhHHHHHHhhcCcEEeccc---------c--ccCCCCchhhhhhhcCCCccccccc
Q psy1363 303 PEYSVLVVGIDAVSRQNF--LRQMSRTYKYLDTHYELVDMRGY---------N--KIGDNTFPNLVAALTGMSEKELEQT 369 (756)
Q Consensus 303 ~~pNVliI~iDSlSr~~f--~R~mPkT~~fL~~~~~~~~f~gy---------n--~vg~~T~pnl~aLlTG~~~~~~~~~ 369 (756)
+.-||||++.|.||-... .|.+--..+ +.+ ...+.|..| + +-=+.+.-...|+|.|....+....
T Consensus 71 kaKNVIlFlgDGMg~~TvtAaRi~~g~~~-~ge-e~~L~fe~FP~~GlSKTy~~d~qVpDSA~tATAylcGvK~n~gtiG 148 (529)
T KOG4126|consen 71 KAKNVILFLGDGMGVSTVTAARILKGQLN-LGE-ETQLAFDRFPYTGLSKTYCSDKQVPDSACTATAYLCGVKTNYGTIG 148 (529)
T ss_pred cCceEEEEeeCCCChhhhHHhhhhccccc-cCc-CceeeeccCccccccccccccccCCchhHhHHHHhhcccccccccc
Confidence 456999999999997654 232221111 222 334445444 1 1112234456688888766543221
Q ss_pred cC-----CCCCCCC---CChhHHHHHHHHCCCeEEeeccC
Q psy1363 370 CY-----PTPESTF---DDCPFLWKNFSAAGFKTLYAEDS 401 (756)
Q Consensus 370 ~~-----~~~~~~l---d~~p~Iw~~fk~aGY~T~~~eD~ 401 (756)
.. ..+.... .....|.+..|+|||.|+++.-.
T Consensus 149 v~a~v~~~~C~~~~~~~~~v~SIl~wAq~AGk~tG~VTTT 188 (529)
T KOG4126|consen 149 VSAAVRFNDCGASANEGNHVISILEWAQLAGKSTGLVTTT 188 (529)
T ss_pred cccccccCCccccccccccchHHHHHHHHhCcccceEEEe
Confidence 11 1111111 24569999999999999887554
Done!