BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13631
(81 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O75581|LRP6_HUMAN Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens
GN=LRP6 PE=1 SV=2
Length = 1613
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Query: 6 GVRLVDNF-TCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
GV+L++N TC +G+ E+LLL +RTD+ +ISLDTPD T+++L + ++HAIAID+DPVE
Sbjct: 313 GVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEG 372
Query: 65 HLYWTDDEAR 74
++YWTDDE R
Sbjct: 373 YIYWTDDEVR 382
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G L+ + + LL +R DI +ISL+T ++ NV +P+ GVK A A+D+D +
Sbjct: 617 GFELISDMKTCIVPEAFLLFSRRADIRRISLET-NNNNVAIPLTGVKEASALDFDVTDNR 675
Query: 66 LYWTD 70
+YWTD
Sbjct: 676 IYWTD 680
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 10 VDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWT 69
DN TC+ LL Q++ I ++ +D +++LP+ +++ AID+DP+++ LYW
Sbjct: 924 ADNRTCS-APTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWI 982
Query: 70 D 70
D
Sbjct: 983 D 983
>sp|O88572|LRP6_MOUSE Low-density lipoprotein receptor-related protein 6 OS=Mus musculus
GN=Lrp6 PE=1 SV=1
Length = 1613
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Query: 6 GVRLVDNF-TCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
GV+L++N TC +G+ E+LLL +RTD+ +ISLDTPD T+++L + ++HAIAID+DPVE
Sbjct: 313 GVKLMENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEG 372
Query: 65 HLYWTDDEAR 74
++YWTDDE R
Sbjct: 373 YIYWTDDEVR 382
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G L+ + + LL +R DI +ISL+T ++ NV +P+ GVK A A+D+D +
Sbjct: 617 GFELIGDMKTCIVPEAFLLFSRRADIRRISLET-NNNNVAIPLTGVKEASALDFDVTDNR 675
Query: 66 LYWTD 70
+YWTD
Sbjct: 676 IYWTD 680
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 10 VDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWT 69
DN TC+ S LL Q++ I ++ +D +++LP+ +++ AID+DP+++ LYW
Sbjct: 924 ADNRTCSAPST-FLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWI 982
Query: 70 D 70
D
Sbjct: 983 D 983
>sp|Q91VN0|LRP5_MOUSE Low-density lipoprotein receptor-related protein 5 OS=Mus musculus
GN=Lrp5 PE=1 SV=3
Length = 1614
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 6 GVRLVDNF-TCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
GV+L DN TC G++E+LLL +RTD+ +ISLDTPD T+++L V ++HAIAID+DP+E
Sbjct: 325 GVQLQDNGKTCKTGAEEVLLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAIDYDPLEG 384
Query: 65 HLYWTDDEAR 74
++YWTDDE R
Sbjct: 385 YVYWTDDEVR 394
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G+ L+ + + L+ R I +ISL+T ++ +V +P+ GVK A A+D+D H
Sbjct: 629 GLELLSDMKTCIIPEAFLVFTSRATIHRISLET-NNNDVAIPLTGVKEASALDFDVSNNH 687
Query: 66 LYWTD 70
+YWTD
Sbjct: 688 IYWTD 692
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 22 MLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTDDEARNKSGE 79
LL Q+ I ++ D +++LP+ G+++ AI++DP+++ +YW D K +
Sbjct: 946 FLLFSQKFAISRMIPDDQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQNIKRAK 1003
>sp|O75197|LRP5_HUMAN Low-density lipoprotein receptor-related protein 5 OS=Homo sapiens
GN=LRP5 PE=1 SV=2
Length = 1615
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 6 GVRLVDN-FTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
GV+L DN TC G++E+LLL +RTD+ +ISLDTPD T+++L V ++HAIAID+DP+E
Sbjct: 326 GVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEG 385
Query: 65 HLYWTDDEAR 74
++YWTDDE R
Sbjct: 386 YVYWTDDEVR 395
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G+ L+ + + L+ R I +ISL+T ++ +V +P+ GVK A A+D+D H
Sbjct: 630 GLELLSDMKTCIVPEAFLVFTSRAAIHRISLET-NNNDVAIPLTGVKEASALDFDVSNNH 688
Query: 66 LYWTD 70
+YWTD
Sbjct: 689 IYWTD 693
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 22 MLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
LL Q++ I ++ D +++LP+ G+++ AID+DP+++ +YW D
Sbjct: 947 FLLFSQKSAISRMIPDDQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVD 995
>sp|Q8VI56|LRP4_MOUSE Low-density lipoprotein receptor-related protein 4 OS=Mus musculus
GN=Lrp4 PE=1 SV=3
Length = 1905
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G R +++ CA + LL +R DI +IS DT D ++ ++P+ V+ A+A+DWD + H
Sbjct: 727 GFRKINSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDH 786
Query: 66 LYWTD 70
+YWTD
Sbjct: 787 VYWTD 791
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 6 GVRLV-DNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
G++L D TC + LL R I +ISLDT DHT+V +PV G+ + I++D+D V
Sbjct: 1338 GIQLKGDRKTCDPSPETYLLFSSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVHG 1397
Query: 65 HLYWTD 70
+Y+TD
Sbjct: 1398 KVYYTD 1403
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 9 LVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPV-VGVKHAIAIDWDPVEQHLY 67
L D TC+ G L+ +R D+ +SLD P +V++P+ + +K+ IAI DP+E +Y
Sbjct: 1037 LRDGKTCSPGMNSFLIFARRIDVRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVY 1096
Query: 68 WTD 70
W+D
Sbjct: 1097 WSD 1099
>sp|Q9QYP1|LRP4_RAT Low-density lipoprotein receptor-related protein 4 OS=Rattus
norvegicus GN=Lrp4 PE=1 SV=2
Length = 1905
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G R +++ CA + LL +R DI +IS DT D ++ ++P+ V+ A+A+DWD + H
Sbjct: 727 GFRKINSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDH 786
Query: 66 LYWTD 70
+YWTD
Sbjct: 787 VYWTD 791
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 6 GVRLV-DNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
G++L D TC + LL R I +ISLDT DHT+V +PV G+ + I++D+D V+
Sbjct: 1338 GIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVDG 1397
Query: 65 HLYWTD 70
+Y+TD
Sbjct: 1398 KVYYTD 1403
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 9 LVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPV-VGVKHAIAIDWDPVEQHLY 67
L+D TC+ G L+ +R D+ +SLD P +V++P+ + +K+ IAI DP+E +Y
Sbjct: 1037 LLDGKTCSPGMNSFLIFARRIDVRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVY 1096
Query: 68 WTD 70
W+D
Sbjct: 1097 WSD 1099
>sp|O75096|LRP4_HUMAN Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens
GN=LRP4 PE=1 SV=4
Length = 1905
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G R + + CA + LL +R DI +IS DT D ++ ++P+ V+ A+A+DWD + H
Sbjct: 727 GFRKISSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDH 786
Query: 66 LYWTD 70
+YWTD
Sbjct: 787 VYWTD 791
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 6 GVRLV-DNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
G++L D TC + LL R I +ISLDT DHT+V +PV + + I++D+D V+
Sbjct: 1338 GIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDG 1397
Query: 65 HLYWTD 70
+Y+TD
Sbjct: 1398 KVYYTD 1403
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 9 LVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPV-VGVKHAIAIDWDPVEQHLY 67
L D TC+ G L+ +R DI +SLD P +V++P+ + +K+ IAI DP E +Y
Sbjct: 1037 LSDGKTCSPGMNSFLIFARRIDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVY 1096
Query: 68 WTD 70
W+D
Sbjct: 1097 WSD 1099
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 11 DNFTCANGSQEMLLLVQRTDICKISLDTPDHTN-VMLPVVGVKHAIAIDWDPVEQHLYWT 69
D+ C G Q L+ V+ I ISLD +N M+P+ G++H +++D EQ +YW
Sbjct: 1737 DSVNCVRGDQPFLISVRENVIFGISLDPEVKSNDAMVPISGIQHGYDVEFDDSEQFIYWV 1796
Query: 70 DDEA 73
++
Sbjct: 1797 ENPG 1800
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 7 VRLVDNFTCANGS--QEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
+R D +C S + L+ R I +++D T+ L + G+ + +A+D+D VE+
Sbjct: 3185 IREPDGKSCRQNSNIEPYLVFSNRYYIRNLTIDG---TSYSLILQGLGNVVALDFDRVEE 3241
Query: 65 HLYWTDDEAR 74
LYW D E +
Sbjct: 3242 RLYWIDAEKQ 3251
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 11 DNFTCANGSQEMLLLVQRTDICKISLDTPDHTN-VMLPVVGVKHAIAIDWDPVEQHLYWT 69
D+ C G Q L+ V+ I ISLD +N M+P+ G++H +++D EQ +YW
Sbjct: 1737 DSVNCVRGDQPFLMSVRDNIIFGISLDPEVKSNDAMVPISGIQHGYDVEFDDSEQFIYWV 1796
Query: 70 DDEA 73
++
Sbjct: 1797 ENPG 1800
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 7 VRLVDNFTCANGS--QEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
+R D +C S + L+ R I + T D ++ L + G+ + +A+D+D VE+
Sbjct: 3185 IREPDGKSCRQNSNIEPYLIFSNRYYIRNL---TTDGSSYSLILQGLGNVVALDFDRVEK 3241
Query: 65 HLYWTDDEAR 74
LYW D E +
Sbjct: 3242 RLYWIDAEKQ 3251
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens
GN=LRP2 PE=1 SV=3
Length = 4655
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 11 DNFTCANGSQEMLLLVQRTDICKISLDTPDHTN-VMLPVVGVKHAIAIDWDPVEQHLYWT 69
D C Q L+ V++ I ISL+ +N M+P+ G+++ + +++D EQ++YW
Sbjct: 1736 DLLNCLRDDQPFLITVRQHIIFGISLNPEVKSNDAMVPIAGIQNGLDVEFDDAEQYIYWV 1795
Query: 70 DDEA 73
++
Sbjct: 1796 ENPG 1799
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 11 DNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGV-KHAIAIDWDPVEQHLYWT 69
DN +C+ +++ + I SL+ DH+ M+PV G ++A+ +D D +YW
Sbjct: 2054 DNRSCS-PYNSFIVVSMLSAIRGFSLELSDHSETMVPVAGQGRNALHVDVDVSSGFIYWC 2112
Query: 70 D 70
D
Sbjct: 2113 D 2113
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 7 VRLVDNFTCANGS--QEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
+R D TC S + L+ R + +++D ++ L + G+ + +A+D+D VE+
Sbjct: 3183 LREPDGKTCRQNSNIEPYLIFSNRYYLRNLTIDGYFYS---LILEGLDNVVALDFDRVEK 3239
Query: 65 HLYWTDDE 72
LYW D +
Sbjct: 3240 RLYWIDTQ 3247
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor OS=Gallus gallus GN=VLDLR
PE=1 SV=1
Length = 863
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 5 YGVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
Y + L A G + L+ R DI KI L+ ++ + V +++ +A+D D EQ
Sbjct: 443 YQMDLATGVCKAVGKEPCLIFTNRRDIRKIGLERKEYIQL---VEQLRNTVALDADIAEQ 499
Query: 65 HLYWTD 70
LYW D
Sbjct: 500 KLYWAD 505
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 5 YGVRLVDNFTCANGSQE--MLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPV 62
Y R D +C + E L+ R + K++LD ++T L G+ +A+A+D+D
Sbjct: 3012 YAPRGGDPHSCKAVTDEEPFLIFANRYYLRKLNLDGSNYT---LLKQGLNNAVALDFDYR 3068
Query: 63 EQHLYWTD 70
EQ +YWTD
Sbjct: 3069 EQMIYWTD 3076
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G L G LL I I LD D ++ ++PV G A+ ID+
Sbjct: 1877 GYSLRSGQQACEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDT 1936
Query: 66 LYWTD 70
+YW D
Sbjct: 1937 IYWVD 1941
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 11 DNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVM-LPVVGVKHAIAIDWDPVEQHLYWT 69
DN TC ++ LL ++ +I + LD P + ++ V + + +D+D EQ +YW+
Sbjct: 1575 DNTTCYE-FKKFLLYARQMEIRGVDLDAPYYNYIISFTVPDIDNVTVLDYDAREQRVYWS 1633
Query: 70 D 70
D
Sbjct: 1634 D 1634
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 20 QEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
+ ++ R +I +I L D++ V++P G+++ IA+D+ + LYWTD
Sbjct: 1269 KPFIIFSNRHEIRRIDLHKGDYS-VLVP--GLRNTIALDFHLSQSALYWTD 1316
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 5 YGVRLVDNFTCANGSQE--MLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPV 62
Y R D +C + E L+ R + K++LD ++T L G+ +A+A+D+D
Sbjct: 3011 YAPRGGDPHSCKAVTDEEPFLIFANRYYLRKLNLDGSNYT---LLKQGLNNAVALDFDYR 3067
Query: 63 EQHLYWTD 70
EQ +YWTD
Sbjct: 3068 EQMIYWTD 3075
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G L G LL I I LD D ++ ++PV G A+ ID+
Sbjct: 1876 GYSLRSGQQACEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDT 1935
Query: 66 LYWTD 70
+YW D
Sbjct: 1936 IYWVD 1940
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 11 DNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVM-LPVVGVKHAIAIDWDPVEQHLYWT 69
DN TC ++ LL ++ +I + LD P + ++ V + + +D+D EQ +YW+
Sbjct: 1574 DNTTCYE-FKKFLLYARQMEIRGVDLDAPYYNYIISFTVPDIDNVTVLDYDAREQRVYWS 1632
Query: 70 D 70
D
Sbjct: 1633 D 1633
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 20 QEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
+ ++ R +I +I L D++ V++P G+++ IA+D+ + LYWTD
Sbjct: 1268 KPFIIFSNRHEIRRIDLHKGDYS-VLVP--GLRNTIALDFHLSQSALYWTD 1315
>sp|Q9NZR2|LRP1B_HUMAN Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens
GN=LRP1B PE=1 SV=2
Length = 4599
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G L N G + L+ I I L+ D + ++P+ G A+ ID+
Sbjct: 1864 GYYLQKNRMSCQGIESFLMYSVHEGIRGIPLEPSDKMDALMPISGTSFAVGIDFHAENDT 1923
Query: 66 LYWTD 70
+YWTD
Sbjct: 1924 IYWTD 1928
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 20 QEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTDDEARNKS 77
+ L+L +I KIS D ++T L G+ + IAID+D E+ +YW D N S
Sbjct: 3014 EPFLILADHHEIRKISTDGSNYT---LLKQGLNNVIAIDFDYREEFIYWIDSSRPNGS 3068
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 20 QEMLLLVQRTDICKISLDTPDHTNVM-LPVVGVKHAIAIDWDPVEQHLYWTD 70
++ LL +R++I + +D P + V + ID+D E+ LYWTD
Sbjct: 1573 KKFLLYARRSEIRGVDIDNPYFNFITAFTVPDIDDVTVIDFDASEERLYWTD 1624
>sp|Q95ND4|EGF_FELCA Pro-epidermal growth factor OS=Felis catus GN=EGF PE=2 SV=1
Length = 1210
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 2 FHFYGVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDP 61
F Y ++L A+G Q LL DI + D D+ +++ +G+ A+D DP
Sbjct: 461 FPGYDLQLDKKSCAASGPQPFLLFANSQDIRHVRFDGTDYGSLLSQQMGM--VFALDHDP 518
Query: 62 VEQHLYWT 69
VE +Y+
Sbjct: 519 VENKIYFA 526
>sp|Q9JI18|LRP1B_MOUSE Low-density lipoprotein receptor-related protein 1B OS=Mus musculus
GN=Lrp1b PE=2 SV=1
Length = 4599
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 6 GVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQH 65
G L N G + L+ I I L+ D + ++P+ G A+ ID+
Sbjct: 1864 GYYLQKNRMSCQGIESFLMYSVHEGIRGIPLEPRDKVDALMPISGAAFAVGIDFHAENDT 1923
Query: 66 LYWTD 70
+YWTD
Sbjct: 1924 IYWTD 1928
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 20 QEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTDDEARNKS 77
+ L+L + +I KIS D ++T L G+ + IA+D+D E+ +YW D N S
Sbjct: 3014 EPFLILADQHEIRKISTDGSNYT---LLKQGLNNVIALDFDYREEFIYWIDSSRPNGS 3068
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 20 QEMLLLVQRTDICKISLDTPDHTNVM--LPVVGVKHAIAIDWDPVEQHLYWTD 70
++ LL +R++I + +D P + N + V + ID+D E+ LYWTD
Sbjct: 1573 KKFLLYARRSEIRGVDIDNP-YVNFITAFTVPDIDDVAVIDFDASEERLYWTD 1624
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 11 DNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVM-LPVVGVKHAIAIDWDPVEQHLYWT 69
DN TC ++ LL ++ +I + +D P + ++ V + + +D+D VEQ +YW+
Sbjct: 1572 DNTTCYE-FKKFLLYARQMEIRGVDIDNPYYNYIISFTVPDIDNVTVVDYDAVEQRIYWS 1630
Query: 70 D 70
D
Sbjct: 1631 D 1631
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 20 QEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
+ L+ R + K++LD ++T L G+ +A+A+D+D EQ +YWTD
Sbjct: 3025 EPFLIFANRYYLRKLNLDGSNYT---LLKQGLNNAVALDFDYREQMIYWTD 3072
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 18 GSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
G LL I I LD D ++ ++PV G A+ ID+ +YW D
Sbjct: 1884 GVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTIYWVD 1936
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 20 QEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
+ ++ R +I +I L D++ V++P G+++ IA+D+ + LYWTD
Sbjct: 1266 KPFIIFSNRHEIRRIDLHRGDYS-VLVP--GLRNTIALDFHLNQSSLYWTD 1313
>sp|P01133|EGF_HUMAN Pro-epidermal growth factor OS=Homo sapiens GN=EGF PE=1 SV=2
Length = 1207
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 2 FHFYGVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDP 61
F Y ++L + A+G Q LL DI + D D+ ++ +G+ +A+ D DP
Sbjct: 464 FPGYDLQLDEKSCAASGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMGMVYAL--DHDP 521
Query: 62 VEQHLYWT 69
VE +Y+
Sbjct: 522 VENKIYFA 529
>sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familiaris GN=EGF PE=2 SV=1
Length = 1216
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 2 FHFYGVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDP 61
F Y ++L A+G Q LL DI + D D+ ++ +G+ A+D DP
Sbjct: 466 FPGYDLQLDKQSCAASGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMGM--VFALDHDP 523
Query: 62 VEQHLYWT 69
VE +Y+
Sbjct: 524 VENKIYFA 531
>sp|Q95209|SORL_RABIT Sortilin-related receptor OS=Oryctolagus cuniculus GN=SORL1 PE=2
SV=1
Length = 2213
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 19/82 (23%)
Query: 6 GVRLVDNFTCANG-----------------SQEMLLLVQRTDICKISLDTPDHTNVMLPV 48
G R + TC+ G E +L R I + L + T LP+
Sbjct: 726 GYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYATRKSIHRYDLAS--GTTEQLPL 783
Query: 49 VGVKHAIAIDWDPVEQHLYWTD 70
G++ A+A+D+D LYW+D
Sbjct: 784 TGLRAAVALDFDYEHNCLYWSD 805
>sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegicus GN=Egf PE=1 SV=2
Length = 1133
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 2 FHFYGVRLVDNFTCAN--GSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDW 59
F Y ++L D +CA G Q LL DI + D D+ ++ +G+ A+D+
Sbjct: 465 FPGYDLQL-DRKSCAASMGPQPFLLFANSQDIRHMHFDGTDYKTLLSRQMGM--VFALDY 521
Query: 60 DPVEQHLYWT 69
DPVE +Y+
Sbjct: 522 DPVESKIYFA 531
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 16 ANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTDDE 72
A G L+ +Q I +I+ D +H + VV ++ +D+ E+ LYW D E
Sbjct: 42 AAGPPRFLIFLQGNSIFRINTDGTNHQQL---VVDAGVSVVMDFHYKEERLYWVDLE 95
>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus norvegicus GN=Vldlr
PE=2 SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 5 YGVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
Y + L A G + L+ R DI KI L+ ++ + V +++ +A+D D Q
Sbjct: 425 YQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQL---VEQLRNTVALDADIAAQ 481
Query: 65 HLYWTD 70
L+W D
Sbjct: 482 KLFWAD 487
>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=Oryctolagus cuniculus
GN=VLDLR PE=2 SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 5 YGVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
Y + L A G + L+ R DI KI L+ ++ + V +++ +A+D D Q
Sbjct: 425 YQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQL---VEQLRNTVALDADIAAQ 481
Query: 65 HLYWTD 70
L+W D
Sbjct: 482 KLFWAD 487
>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus musculus GN=Vldlr PE=1
SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 5 YGVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
Y + L A G + L+ R DI KI L+ ++ + V +++ +A+D D Q
Sbjct: 425 YQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQL---VEQLRNTVALDADIAAQ 481
Query: 65 HLYWTD 70
L+W D
Sbjct: 482 KLFWAD 487
>sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=Homo sapiens GN=VLDLR PE=1
SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 5 YGVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQ 64
Y + L A G + L+ R DI KI L+ ++ + V +++ +A+D D Q
Sbjct: 425 YQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQL---VEQLRNTVALDADIAAQ 481
Query: 65 HLYWTD 70
L+W D
Sbjct: 482 KLFWAD 487
>sp|P01132|EGF_MOUSE Pro-epidermal growth factor OS=Mus musculus GN=Egf PE=1 SV=2
Length = 1217
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 11 DNFTCA-NGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWT 69
D +CA +G Q +LL DI + D D+ ++ +G+ A+D+DPVE +Y+
Sbjct: 478 DRKSCAASGPQPLLLFANSQDIRHMHFDGTDYKVLLSRQMGM--VFALDYDPVESKIYFA 535
>sp|O88307|SORL_MOUSE Sortilin-related receptor OS=Mus musculus GN=Sorl1 PE=2 SV=3
Length = 2215
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 19/82 (23%)
Query: 6 GVRLVDNFTCANG-----------------SQEMLLLVQRTDICKISLDTPDHTNVMLPV 48
G R + TC+ G E +L R I + L + LP+
Sbjct: 727 GYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYAMRKSIYRYDLAS--GATEQLPL 784
Query: 49 VGVKHAIAIDWDPVEQHLYWTD 70
G++ A+A+D+D LYW+D
Sbjct: 785 SGLRAAVALDFDYERNCLYWSD 806
>sp|P35952|LDLR_RAT Low-density lipoprotein receptor OS=Rattus norvegicus GN=Ldlr PE=2
SV=1
Length = 879
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 16 ANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTDDEAR 74
A GS LL R ++ K++LD ++T++ + +K+ +A+D + +YW+D R
Sbjct: 395 AVGSIGFLLFTNRHEVRKMTLDRSEYTSL---IPNLKNVVALDTEVANNRIYWSDLSQR 450
>sp|P35950|LDLR_CRIGR Low-density lipoprotein receptor OS=Cricetulus griseus GN=LDLR PE=3
SV=2
Length = 862
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 16 ANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
A GS LL R ++ K++LD ++T++ + +K+ +A+D + +YW+D
Sbjct: 395 AVGSVAYLLFTNRHEVRKMTLDRSEYTSL---IPNLKNVVALDTEVANNRIYWSD 446
>sp|Q54B60|OMT11_DICDI Probable inactive O-methyltransferase 11 OS=Dictyostelium
discoideum GN=omt11 PE=3 SV=1
Length = 331
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 7 VRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVK 52
+ LVD F C + M +V + IC + D P H + + ++G K
Sbjct: 7 LELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFK 52
>sp|P35951|LDLR_MOUSE Low-density lipoprotein receptor OS=Mus musculus GN=Ldlr PE=1 SV=2
Length = 862
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 16 ANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
A GS LL R ++ K++LD ++T+ +LP +K+ +A+D + +YW+D
Sbjct: 395 AVGSIGYLLFTNRHEVRKMTLDRSEYTS-LLP--NLKNVVALDTEVTNNRIYWSD 446
>sp|Q92673|SORL_HUMAN Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2
Length = 2214
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 19/82 (23%)
Query: 6 GVRLVDNFTCANG-----------------SQEMLLLVQRTDICKISLDTPDHTNVMLPV 48
G R + TC+ G E +L R I + L + LP+
Sbjct: 727 GYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYAVRKSIYRYDLAS--GATEQLPL 784
Query: 49 VGVKHAIAIDWDPVEQHLYWTD 70
G++ A+A+D+D LYW+D
Sbjct: 785 TGLRAAVALDFDYEHNCLYWSD 806
>sp|Q28832|LDLR_PIG Low-density lipoprotein receptor (Fragment) OS=Sus scrofa GN=LDLR
PE=1 SV=2
Length = 811
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 16 ANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTDDEAR 74
A G+ L R ++ K++LD ++T++ + +K+ +A+D + +YW+D R
Sbjct: 365 AIGTIAYLFFTNRHEVRKMTLDRSEYTSL---IPNLKNVVALDTEVASNRIYWSDLSQR 420
>sp|Q00968|EGF_PIG Pro-epidermal growth factor OS=Sus scrofa GN=EGF PE=1 SV=2
Length = 1214
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 2 FHFYGVRLVDNFTCANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDP 61
F Y ++L A+G LL DI + D D+ ++ +G+ +A+D DP
Sbjct: 464 FPGYDLQLDKKSCRASGPPPFLLFANSQDIRHMHFDGTDYETLLNQQIGM--VLALDHDP 521
Query: 62 VEQHLYWT 69
VE +Y+
Sbjct: 522 VENKVYFA 529
>sp|P20063|LDLR_RABIT Low-density lipoprotein receptor (Fragment) OS=Oryctolagus
cuniculus GN=LDLR PE=2 SV=1
Length = 837
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 23 LLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTDDEAR 74
L R ++ K++LD ++T++ + +K+ +A+D + +YW+D R
Sbjct: 388 LFFTNRHEVRKMTLDRSEYTSL---IANLKNVVALDAEVASNRIYWSDLSQR 436
>sp|P01130|LDLR_HUMAN Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Length = 860
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 16 ANGSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTDDEAR 74
A GS L R ++ K++LD ++T++ + +++ +A+D + +YW+D R
Sbjct: 394 AVGSIAYLFFTNRHEVRKMTLDRSEYTSL---IPNLRNVVALDTEVASNRIYWSDLSQR 449
>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus laevis GN=ldlr-a PE=2
SV=1
Length = 909
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 18 GSQEMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
G+ L R ++ K++LD ++T+V + +K+ +A+D + +YW+D
Sbjct: 394 GTVAYLFFTNRHEVRKMTLDRSEYTSV---IPRLKNVVALDMEIASNKIYWSD 443
>sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gallus gallus GN=SORL1 PE=2
SV=1
Length = 1592
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 21 EMLLLVQRTDICKISLDTPDHTNVMLPVVGVKHAIAIDWDPVEQHLYWTD 70
E +L R I + L + + LP+ G++ A+A+D+D LYW D
Sbjct: 666 EFILYATRYSIHRYDLAS--GLSQELPLAGLRGAVALDFDYEHNCLYWAD 713
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,800,655
Number of Sequences: 539616
Number of extensions: 1032787
Number of successful extensions: 2144
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1989
Number of HSP's gapped (non-prelim): 175
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)