BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13634
(242 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O88572|LRP6_MOUSE Low-density lipoprotein receptor-related protein 6 OS=Mus musculus
GN=Lrp6 PE=1 SV=1
Length = 1613
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 162/242 (66%), Gaps = 10/242 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKV-KANSLTVNYDEKRVYYVNLLSSSIESID 59
M W++WG I+R+A+DG++R+ L+ V +AN LT++Y ++R+Y+ +L ++ IES D
Sbjct: 762 MYWTEWGGKP--KIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSD 819
Query: 60 IEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIND 119
+ G N+ ++A+ P LT Y+ I++++W +RSIE+ +KTS I + + D
Sbjct: 820 MLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMD 878
Query: 120 MLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMAPSS 177
+L++H SRQ GWN+CA +N C +LCLA P G + C CP HY++ N TC APS+
Sbjct: 879 ILVFHSSRQAGWNECASSNGHCSHLCLAVPVGG----FVCGCPAHYSLNADNRTCSAPST 934
Query: 178 FLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASE 237
FL+++Q++ ++R++ D Q PD I +++N++A+DYDP+ +Q+YWIDS+ +I++A E
Sbjct: 935 FLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNSIRKAHE 994
Query: 238 NA 239
+
Sbjct: 995 DG 996
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 19/249 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IER+ALDG+ R VL++ N L ++YDE +Y+ + + IE +
Sbjct: 460 MYWTDWG--EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKTDKIEVM 517
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+ +G + +V + TL +++++W +RSIE+ K S R VI ++
Sbjct: 518 NTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVII----DQLP 573
Query: 119 DMLIYHPS---RQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCM 173
D++ + R G N CA N C +LCL P GL +C CP + ++ TC+
Sbjct: 574 DLMGLKATSVHRVIGSNPCAEDNGGCSHLCLYRP---QGL--RCACPIGFELIGDMKTCI 628
Query: 174 APSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIK 233
P +FL++++R + R I+ T + + VK ALD+D +IYW D L+ I
Sbjct: 629 VPEAFLLFSRRADIRR-ISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTIS 687
Query: 234 RASENATRI 242
RA N + +
Sbjct: 688 RAFMNGSAL 696
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 127/241 (52%), Gaps = 11/241 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IER+ +DG+ R V+++ N LT++Y E+++Y+ + + I
Sbjct: 152 MYWTDWG--EVPKIERAGMDGSSRFVIINTEIYWPNGLTLDYQERKLYWADAKLNFIHKS 209
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G N+ +V P LTL++ +++++W+ SI +K + S+
Sbjct: 210 NLDGTNRQAVVKGSLPHPFALTLFEDTLYWTDWNTHSILACNKYTGEGLREIHSNIFSPM 269
Query: 119 DMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV-NG-TCM-A 174
D+ + RQ N C + N C +LCL +P + Y+C CPT ++ NG TC
Sbjct: 270 DIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKP---FYQCACPTGVKLMENGKTCKDG 326
Query: 175 PSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKR 234
+ L+ A+R L R+ D D ++ ++++ A+DYDPV IYW D +++AI+R
Sbjct: 327 ATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRR 386
Query: 235 A 235
+
Sbjct: 387 S 387
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 16/173 (9%)
Query: 14 IERSALDGTQRSVLLHKVKANSLTVNYDEK--RVYYVNLLSSSIESIDIEGRNKITIVAN 71
IER+ALDGT+R VL + + + D K ++++ + IES D+ G N+I + +
Sbjct: 1083 IERAALDGTEREVLFFSGLSKPIALALDSKLGKLFWADSDLRRIESSDLSGANRIVLEDS 1142
Query: 72 IEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDM-----LIYHPS 126
+PV LT++++ +++ + ++ IEK D T ++ +++D+ L
Sbjct: 1143 NILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQEY 1202
Query: 127 RQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAPSS 177
RQ + CA N C ++CL +G G +C CP H ++ +C P +
Sbjct: 1203 RQ---HPCAQDNGGCSHICLV---KGDGTT-RCSCPMHLVLLQDELSCGEPPT 1248
>sp|O75581|LRP6_HUMAN Low-density lipoprotein receptor-related protein 6 OS=Homo sapiens
GN=LRP6 PE=1 SV=2
Length = 1613
Score = 200 bits (508), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 164/244 (67%), Gaps = 10/244 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKV-KANSLTVNYDEKRVYYVNLLSSSIESID 59
M W++WG I+R+A+DG++R+ L+ V +AN LT++Y ++R+Y+ +L ++ IES +
Sbjct: 762 MYWTEWGGKP--KIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSN 819
Query: 60 IEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIND 119
+ G N+ ++A+ P LT Y+ I++++W +RSIE+ +KTS I + + D
Sbjct: 820 MLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMD 878
Query: 120 MLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMAPSS 177
+L++H SRQ+GWN+CA +N C +LCLA P G + C CP HY++ N TC AP++
Sbjct: 879 ILVFHSSRQSGWNECASSNGHCSHLCLAVPVGG----FVCGCPAHYSLNADNRTCSAPTT 934
Query: 178 FLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASE 237
FL+++Q++ ++R++ D Q PD I +++N++A+DYDP+ +Q+YWIDS+ I++A E
Sbjct: 935 FLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQE 994
Query: 238 NATR 241
+ ++
Sbjct: 995 DGSQ 998
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 19/249 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IER+ALDG+ R VL++ N L ++YDE ++Y+ + + IE +
Sbjct: 460 MYWTDWG--EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVM 517
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+ +G + +V + TL +++++W +RSIE+ K S R VI ++
Sbjct: 518 NTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVII----DQLP 573
Query: 119 DMLIYHPS---RQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCM 173
D++ + R G N CA N C +LCL P GL +C CP + +++ TC+
Sbjct: 574 DLMGLKATNVHRVIGSNPCAEENGGCSHLCLYRP---QGL--RCACPIGFELISDMKTCI 628
Query: 174 APSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIK 233
P +FL++++R + R I+ T + + VK ALD+D +IYW D L+ I
Sbjct: 629 VPEAFLLFSRRADIRR-ISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTIS 687
Query: 234 RASENATRI 242
RA N + +
Sbjct: 688 RAFMNGSAL 696
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 126/241 (52%), Gaps = 11/241 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IER+ +DG+ R ++++ N LT++Y+E+++Y+ + + I
Sbjct: 152 MYWTDWG--EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 209
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G N+ +V P LTL++ +++++W SI +K + S
Sbjct: 210 NLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPM 269
Query: 119 DMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV-NG-TCM-A 174
D+ + RQ N C + N C +LCL +P + Y+C CPT ++ NG TC
Sbjct: 270 DIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKP---FYQCACPTGVKLLENGKTCKDG 326
Query: 175 PSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKR 234
+ L+ A+R L R+ D D ++ ++++ A+DYDPV IYW D +++AI+R
Sbjct: 327 ATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRR 386
Query: 235 A 235
+
Sbjct: 387 S 387
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 16/173 (9%)
Query: 14 IERSALDGTQRSVLLHKVKANSLTVNYDEK--RVYYVNLLSSSIESIDIEGRNKITIVAN 71
IER+ALDGT+R VL + + + D + ++++ + IES D+ G N+I + +
Sbjct: 1083 IERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDS 1142
Query: 72 IEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDM-----LIYHPS 126
+PV LT++++ +++ + ++ IEK D T ++ +++D+ L
Sbjct: 1143 NILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQEY 1202
Query: 127 RQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAPSS 177
RQ + CA N C ++CL +G G +C CP H ++ +C P +
Sbjct: 1203 RQ---HPCAQDNGGCSHICLV---KGDGTT-RCSCPMHLVLLQDELSCGEPPT 1248
>sp|O75197|LRP5_HUMAN Low-density lipoprotein receptor-related protein 5 OS=Homo sapiens
GN=LRP5 PE=1 SV=2
Length = 1615
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 148/242 (61%), Gaps = 12/242 (4%)
Query: 3 WSDWGAGNGGTIERSALDGTQRSVLLHKV-KANSLTVNYDEKRVYYVNLLSSSIESIDIE 61
W++WG I R+ +DGT L+ KV +AN LT++Y ++R+Y+ +L ++ IES ++
Sbjct: 777 WTEWGGKP--RIVRAFMDGTNCMTLVDKVGRANDLTIDYADQRLYWTDLDTNMIESSNML 834
Query: 62 GRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDML 121
G+ ++ I ++ P LT Y I++++W+ SIE+ DKTS + + + D+L
Sbjct: 835 GQERVVIADDLP-HPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDIL 893
Query: 122 IYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGT--CMAPSSFL 179
++H SRQ G N C N +C LCLA PG ++C C +HYT+ + C P++FL
Sbjct: 894 VFHSSRQDGLNDCMHNNGQCGQLCLAIPG-----GHRCGCASHYTLDPSSRNCSPPTTFL 948
Query: 180 IYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASENA 239
+++Q++ +SR+I D PD + ++N+KA+DYDP+ + IYW+D + Q IKRA ++
Sbjct: 949 LFSQKSAISRMIPDDQHSPDLILPLHGLRNVKAIDYDPLDKFIYWVDGR-QNIKRAKDDG 1007
Query: 240 TR 241
T+
Sbjct: 1008 TQ 1009
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 13/246 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IE + LDG +R VL++ N L ++ E ++Y+ + + IE I
Sbjct: 473 MYWTDWG--ENPKIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTDKIEVI 530
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G + T++ + TL I++++W +RSIE+ K +R VI ++
Sbjct: 531 NVDGTKRRTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVII-DQLPDLM 589
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAPS 176
+ + ++ G N CA N C +LC TP +C CP +++ TC+ P
Sbjct: 590 GLKAVNVAKVVGTNPCADRNGGCSHLCFFTPHA-----TRCGCPIGLELLSDMKTCIVPE 644
Query: 177 SFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRAS 236
+FL++ R + R I+ T D + VK ALD+D IYW D L+ I RA
Sbjct: 645 AFLVFTSRAAIHR-ISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAF 703
Query: 237 ENATRI 242
N + +
Sbjct: 704 MNGSSV 709
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 123/241 (51%), Gaps = 11/241 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IER+ +DG+ R +++ N LT++ +E+++Y+ + S I
Sbjct: 165 MYWTDWG--ETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 222
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G + +V P LTL +++++W RSI +K + + S+
Sbjct: 223 NLDGSFRQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKRTGGKRKEILSALYSPM 282
Query: 119 DMLIYHPSRQTGWN-KCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV-NG-TCMAP 175
D+ + RQ ++ +C N C +LCL +P Y C CPT + NG TC A
Sbjct: 283 DIQVLSQERQPFFHTRCEEDNGGCSHLCLLSPSEP---FYTCACPTGVQLQDNGRTCKAG 339
Query: 176 SS-FLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKR 234
+ L+ A+R L R+ D D ++ ++++ A+DYDP+ +YW D +++AI+R
Sbjct: 340 AEEVLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRR 399
Query: 235 A 235
A
Sbjct: 400 A 400
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 14 IERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIV-A 70
IER+ALDGT+R VL ++ +L V+ ++++V+ IES D+ G N++T+ A
Sbjct: 1093 IERAALDGTEREVLFTTGLIRPVALVVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDA 1152
Query: 71 NIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDMLIYHPS--RQ 128
NI +P+ LT+ +++ + ++ IE+ +KT+ + + + + +
Sbjct: 1153 NIV-QPLGLTILGKHLYWIDRQQQMIERVEKTTGDKRTRIQGRVAHLTGIHAVEEVSLEE 1211
Query: 129 TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAPSS 177
+ CA N C ++C+A +G G +C CP H ++ TC P +
Sbjct: 1212 FSAHPCARDNGGCSHICIA---KGDG-TPRCSCPVHLVLLQNLLTCGEPPT 1258
>sp|Q91VN0|LRP5_MOUSE Low-density lipoprotein receptor-related protein 5 OS=Mus musculus
GN=Lrp5 PE=1 SV=3
Length = 1614
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 148/242 (61%), Gaps = 12/242 (4%)
Query: 3 WSDWGAGNGGTIERSALDGTQRSVLLHKV-KANSLTVNYDEKRVYYVNLLSSSIESIDIE 61
W++WG I R+ +DGT L+ KV +AN LT++Y ++R+Y+ +L ++ IES ++
Sbjct: 776 WTEWGGKP--RIVRAFMDGTNCMTLVDKVGRANDLTIDYADQRLYWTDLDTNMIESSNML 833
Query: 62 GRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDML 121
G+ ++ I ++ P LT Y I++++W+ SIE+ DKTS + + + D+L
Sbjct: 834 GQERMVIADDLP-YPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDIL 892
Query: 122 IYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGT--CMAPSSFL 179
++H SRQ G N C +N +C LCLA PG ++C C +HYT+ + C PS+FL
Sbjct: 893 VFHSSRQDGLNDCVHSNGQCGQLCLAIPG-----GHRCGCASHYTLDPSSRNCSPPSTFL 947
Query: 180 IYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASENA 239
+++Q+ +SR+I D PD + ++N+KA++YDP+ + IYW+D + Q IKRA ++
Sbjct: 948 LFSQKFAISRMIPDDQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGR-QNIKRAKDDG 1006
Query: 240 TR 241
T+
Sbjct: 1007 TQ 1008
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 13/246 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IE + LDG R VL++ N L ++ E ++Y+ + + IE I
Sbjct: 472 MYWTDWG--ENPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVI 529
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+I+G + T++ + TL I++++W +RSIE+ K +R VI ++
Sbjct: 530 NIDGTKRKTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVII-DQLPDLM 588
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAPS 176
+ + ++ G N CA N C +LC TP KC CP +++ TC+ P
Sbjct: 589 GLKAVNVAKVVGTNPCADGNGGCSHLCFFTP-----RATKCGCPIGLELLSDMKTCIIPE 643
Query: 177 SFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRAS 236
+FL++ R + R I+ T D + VK ALD+D IYW D L+ I RA
Sbjct: 644 AFLVFTSRATIHR-ISLETNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAF 702
Query: 237 ENATRI 242
N + +
Sbjct: 703 MNGSSV 708
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 11/241 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IER+ +DG+ R +++ N LT++ +E+++Y+ + S I
Sbjct: 164 MYWTDWG--EAPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRA 221
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G + +V P LTL +++++W RSI +K + + S+
Sbjct: 222 NLDGSFRQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKWTGEQRKEILSALYSPM 281
Query: 119 DMLIYHPSRQTGWN-KCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV-NG-TC-MA 174
D+ + RQ ++ C N C +LCL +P Y C CPT + NG TC
Sbjct: 282 DIQVLSQERQPPFHTPCEEDNGGCSHLCLLSPREP---FYSCACPTGVQLQDNGKTCKTG 338
Query: 175 PSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKR 234
L+ A+R L R+ D D ++ ++++ A+DYDP+ +YW D +++AI+R
Sbjct: 339 AEEVLLLARRTDLRRISLDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRR 398
Query: 235 A 235
A
Sbjct: 399 A 399
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 10 NGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKIT 67
+ IER++LDGT+R VL ++ +L V+ ++++V+ IES D+ G N++T
Sbjct: 1088 HAAKIERASLDGTEREVLFTTGLIRPVALVVDNALGKLFWVDADLKRIESCDLSGANRLT 1147
Query: 68 IV-ANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDMLIYHPS 126
+ ANI +PV LT+ +++ + ++ IE+ +KT+ + + + + H
Sbjct: 1148 LEDANIV-QPVGLTVLGRHLYWIDRQQQMIERVEKTTGDKRT---RVQGRVTHLTGIHAV 1203
Query: 127 RQTGWNK-----CAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAPSS 177
+ + CA N C ++C+A +G G +C CP H ++ TC P +
Sbjct: 1204 EEVSLEEFSAHPCARDNGGCSHICIA---KGDG-TPRCSCPVHLVLLQNLLTCGEPPT 1257
>sp|O75096|LRP4_HUMAN Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens
GN=LRP4 PE=1 SV=4
Length = 1905
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 132/247 (53%), Gaps = 13/247 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG +ERS +DG+ R+VL++ N LTV+ ++ + + + IE+
Sbjct: 1181 MYWTDWG--ENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAA 1238
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D+ G N+ T+V+ ++ P LTL S I++++W RSI + DK + + ++ RS+ +
Sbjct: 1239 DLNGANRHTLVSPVQ-HPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRSNLPGLM 1297
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TC-MAP 175
DM ++ G+NKC N C +LCL P + C CPT + TC +P
Sbjct: 1298 DMQAVDRAQPLGFNKCGSRNGGCSHLCLPRPS-----GFSCACPTGIQLKGDGKTCDPSP 1352
Query: 176 SSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
++L+++ R + R+ D + D +P + N+ +LDYD V ++Y+ D L I+RA
Sbjct: 1353 ETYLLFSSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVYYTDVFLDVIRRA 1412
Query: 236 SENATRI 242
N + +
Sbjct: 1413 DLNGSNM 1419
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 12/245 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLL--HKVKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG N IE S++DG+ R ++ H N LT++Y +R+Y+V+ IE
Sbjct: 568 IYWTDWG--NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 625
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G ++ +++ P +T+++ +++++W +SI +K + I R+
Sbjct: 626 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPM 685
Query: 119 DMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTCMAPS- 176
D+ HP RQ G N+C N C +LCL + G NY C CPT + ++ A S
Sbjct: 686 DIHTLHPQRQPAGKNRCGDNNGGCTHLCLPS-----GQNYTCACPTGFRKISSHACAQSL 740
Query: 177 -SFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
FL++A+R + R+ D D + +V++ ALD+D +YW D I RA
Sbjct: 741 DKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRA 800
Query: 236 SENAT 240
+ T
Sbjct: 801 KWDGT 805
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 23/253 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWGA IER+ +D + R V++ N L ++Y +R+Y+ + +IE
Sbjct: 873 MYWTDWGASP--KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFA 930
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
++G + ++ + P LTLY I++++W +SI+ D+ + + + + +
Sbjct: 931 GLDGSKRKVLIGSQLPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENLENLM 990
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV-NGTCMAPS- 176
D+ ++H R CA+ N C +LCL +P G + C CPT ++ +G +P
Sbjct: 991 DIHVFHRRRPPVSTPCAMENGGCSHLCLRSPNPSG---FSCTCPTGINLLSDGKTCSPGM 1047
Query: 177 -SFLIYAQRNILSRLITDPTQCPDSPY----EIP---NVKNIKALDYDPVARQIYWIDSK 228
SFLI+A+R I R+++ D PY +P +KN A+ DP ++YW DS
Sbjct: 1048 NSFLIFARR-IDIRMVS-----LDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDST 1101
Query: 229 LQAIKRASENATR 241
L I RA+ + ++
Sbjct: 1102 LHRISRANLDGSQ 1114
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG + IER+ LDG++R VL++ N LT++YD +R+Y+V+ IES
Sbjct: 1485 LFWTDWG--HIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESA 1542
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D+ G+ + +V+++ P LT I++++W +SI++ DK S ++ + +
Sbjct: 1543 DLNGKLRQVLVSHVS-HPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLM 1601
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECP 162
D+++ P RQTG N C V N C +LC A ++ C CP
Sbjct: 1602 DIIVVSPQRQTGTNACGVNNGGCTHLCFARAS-----DFVCACP 1640
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 14 IERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
I R+ LDG+Q ++ + L V+ ++VY+ + ++ IE +++G + +V
Sbjct: 1105 ISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 72 IEDKPVTLTLYKSE--IFYSNWDKRS-IEKYDKTSHTRSVIYRSSEKEINDMLIYHPSRQ 128
D P + LY +++++W + + +E+ R+V+ ++ N + + S Q
Sbjct: 1165 NLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQ 1224
Query: 129 TGW 131
W
Sbjct: 1225 LLW 1227
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 157 YKCECPTHYTMV----NGTCMAPSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKA 212
++C C T Y + + + P L++A R + +++ ++ + N++N A
Sbjct: 416 FQCWCETGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSE---YTLLLNNLENAIA 472
Query: 213 LDYDPVARQIYWIDSKLQAIKRASENATRI 242
LD+ ++W D L I RA+ N + +
Sbjct: 473 LDFHHRRELVFWSDVTLDRILRANLNGSNV 502
>sp|Q9QYP1|LRP4_RAT Low-density lipoprotein receptor-related protein 4 OS=Rattus
norvegicus GN=Lrp4 PE=1 SV=2
Length = 1905
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 13/247 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG +ERS +DG+ R+VL++ N LTV+ ++ + + + IE
Sbjct: 1181 MYWTDWG--ENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVA 1238
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D+ G N+ T+V+ ++ P LTL S I++++W RSI + DK++ + ++ RS+ +
Sbjct: 1239 DLNGANRHTLVSPVQ-HPYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVILVRSNLPGLM 1297
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TC-MAP 175
D+ ++ G+NKC N C +LCL P + C CPT + TC +P
Sbjct: 1298 DIQAVDRAQPLGFNKCGSRNGGCSHLCLPRPS-----GFSCACPTGIQLKGDGKTCDPSP 1352
Query: 176 SSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
++L+++ R + R+ D D +P + N+ +LDYD V ++Y+ D L I+RA
Sbjct: 1353 ETYLLFSSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVDGKVYYTDVFLDVIRRA 1412
Query: 236 SENATRI 242
N + +
Sbjct: 1413 DLNGSNM 1419
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 12/245 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLL--HKVKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG N IE S++DG+ R ++ H N LT++Y +R+Y+V+ IE
Sbjct: 568 IYWTDWG--NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 625
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G ++ +++ P +T+++ +++++W +SI +K + I R+
Sbjct: 626 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPM 685
Query: 119 DMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTCMAPS- 176
D+ HP RQ G N+C N C +LCL + G NY C CPT + +N A S
Sbjct: 686 DIHTLHPQRQPAGKNRCGDNNGGCTHLCLPS-----GQNYTCACPTGFRKINSHACAQSL 740
Query: 177 -SFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
FL++A+R + R+ D D + +V++ ALD+D +YW D I RA
Sbjct: 741 DKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRA 800
Query: 236 SENAT 240
+ T
Sbjct: 801 KWDGT 805
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 130/253 (51%), Gaps = 23/253 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWGA IER+ +D + R V++ N L ++Y +R+Y+ + +IE
Sbjct: 873 MYWTDWGASP--KIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFA 930
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
++G + ++ + P LTLY I++++W +SI+ D+ + + + + +
Sbjct: 931 GLDGSKRKVLIGSQLPHPFGLTLYGQRIYWTDWQTKSIQSADRLTGLDRETLQENLENLM 990
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYT-MVNGTCMAPS- 176
D+ ++H R CAV N C +LCL +P G + C CPT +++G +P
Sbjct: 991 DIHVFHRQRPPVTTPCAVENGGCSHLCLRSPSPSG---FSCTCPTGINLLLDGKTCSPGM 1047
Query: 177 -SFLIYAQRNILSRLITDPTQCPDSPY----EIP---NVKNIKALDYDPVARQIYWIDSK 228
SFLI+A+R I R+++ D PY +P +KN A+ DP+ ++YW DS
Sbjct: 1048 NSFLIFARR-IDVRMVS-----LDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDST 1101
Query: 229 LQAIKRASENATR 241
L I RAS + ++
Sbjct: 1102 LHRISRASLDGSQ 1114
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG + IER+ LDG++R VL++ N LT++YD +R+Y+V+ IES
Sbjct: 1485 LFWTDWG--HIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLDRIESA 1542
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D+ G+ + +V+++ P LT I++++W +SI++ DK S ++ + +
Sbjct: 1543 DLNGKLRQVLVSHVS-HPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLM 1601
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECP 162
D+++ P RQTG N C V N C +LC A ++ C CP
Sbjct: 1602 DIIVVSPQRQTGTNACGVNNGGCSHLCFARAS-----DFVCACP 1640
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 14 IERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
I R++LDG+Q ++ + L V+ ++VY+ + ++ IE +++G + +V
Sbjct: 1105 ISRASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 72 IEDKPVTLTLYKSE--IFYSNWDKRS-IEKYDKTSHTRSVIYRSSEKEINDMLIYHPSRQ 128
D P + LY +++++W + + +E+ R+V+ ++ N + + S Q
Sbjct: 1165 NLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQ 1224
Query: 129 TGW 131
W
Sbjct: 1225 LLW 1227
>sp|Q8VI56|LRP4_MOUSE Low-density lipoprotein receptor-related protein 4 OS=Mus musculus
GN=Lrp4 PE=1 SV=3
Length = 1905
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 13/247 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG +ERS +DG+ R+VL++ N LTV+ ++ + + + IE
Sbjct: 1181 MYWTDWG--ENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVA 1238
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D+ G N+ T+V+ ++ P LTL S I++++W RSI + DK++ + ++ RS+ +
Sbjct: 1239 DLNGANRHTLVSPVQ-HPYGLTLLDSYIYWTDWQTRSIHRADKSTGSNVILVRSNLPGLM 1297
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TC-MAP 175
D+ ++ G+NKC N C +LCL P + C CPT + TC +P
Sbjct: 1298 DIQAVDRAQPLGFNKCGSRNGGCSHLCLPRPS-----GFSCACPTGIQLKGDRKTCDPSP 1352
Query: 176 SSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
++L+++ R + R+ D D +P + N+ +LDYD V ++Y+ D L I+RA
Sbjct: 1353 ETYLLFSSRGSIRRISLDTDDHTDVHVPVPGLNNVISLDYDSVHGKVYYTDVFLDVIRRA 1412
Query: 236 SENATRI 242
N + +
Sbjct: 1413 DLNGSNM 1419
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 12/245 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLL--HKVKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG N IE S++DG+ R ++ H N LT++Y +R+Y+V+ IE
Sbjct: 568 IYWTDWG--NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 625
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G ++ +++ P +T+++ +++++W +SI +K + I R+
Sbjct: 626 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPM 685
Query: 119 DMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTCMAPS- 176
D+ HP RQ G N+C N C +LCL + G NY C CPT + +N A S
Sbjct: 686 DIHTLHPQRQPAGKNRCGDNNGGCTHLCLPS-----GQNYTCACPTGFRKINSHACAQSL 740
Query: 177 -SFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
FL++A+R + R+ D D + +V++ ALD+D +YW D I RA
Sbjct: 741 DKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRA 800
Query: 236 SENAT 240
+ T
Sbjct: 801 KWDGT 805
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 130/253 (51%), Gaps = 23/253 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWGA IER+ +D + R V++ N L ++Y +R+Y+ + +IE
Sbjct: 873 MYWTDWGASP--KIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFA 930
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
++G + ++ + P LTLY I++++W +SI+ D+ + + + + +
Sbjct: 931 GLDGSKRKVLIGSQLPHPFGLTLYGQRIYWTDWQTKSIQSADRLTGLDRETLQENLENLM 990
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV-NGTCMAPS- 176
D+ ++H R CAV N C +LCL +P G + C CPT ++ +G +P
Sbjct: 991 DIHVFHRQRPPVTTLCAVENGGCSHLCLRSPNPSG---FSCTCPTGINLLRDGKTCSPGM 1047
Query: 177 -SFLIYAQRNILSRLITDPTQCPDSPY----EIP---NVKNIKALDYDPVARQIYWIDSK 228
SFLI+A+R I R+++ D PY +P +KN A+ DP+ ++YW DS
Sbjct: 1048 NSFLIFARR-IDVRMVS-----LDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDST 1101
Query: 229 LQAIKRASENATR 241
L I RAS + ++
Sbjct: 1102 LHRISRASLDGSQ 1114
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 92/164 (56%), Gaps = 10/164 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG + IER+ LDG++R VL++ N LT++YD +R+Y+V+ IES
Sbjct: 1485 LFWTDWG--HIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESA 1542
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D+ G+ + +V+++ P LT I++++W +SI++ DK S ++ + +
Sbjct: 1543 DLNGKLRQVLVSHVS-HPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLM 1601
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECP 162
D+++ P RQTG N C V N C +LC A ++ C CP
Sbjct: 1602 DIIVVSPQRQTGTNACGVNNGGCTHLCFARAS-----DFVCACP 1640
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 14 IERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
I R++LDG+Q ++ + L V+ ++VY+ + ++ IE +++G + +V
Sbjct: 1105 ISRASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQ 1164
Query: 72 IEDKPVTLTLYKSE--IFYSNWDKRS-IEKYDKTSHTRSVIYRSSEKEINDMLIYHPSRQ 128
D P + LY +++++W + + +E+ R+V+ ++ N + + S Q
Sbjct: 1165 NLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQ 1224
Query: 129 TGW 131
W
Sbjct: 1225 LLW 1227
Score = 31.6 bits (70), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 132 NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV----NGTCMAPSSFLIYAQRNIL 187
N+CA C C T G ++C C Y + + + P L++A R +
Sbjct: 397 NECA-EEGYCSQGCTNTEGA-----FQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDI 450
Query: 188 SRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASENATRI 242
+++ ++ + N++N ALD+ ++W D L I RA+ N + +
Sbjct: 451 RQVLPHRSE---YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 502
>sp|Q9NZR2|LRP1B_HUMAN Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens
GN=LRP1B PE=1 SV=2
Length = 4599
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 132/255 (51%), Gaps = 19/255 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA----NSLTVNYDEKRVYYVNLLSSSIE 56
+ W+DW A N IE +++ G R + +K N LTV++ EKR+ + + S +I
Sbjct: 1392 LFWTDWDA-NFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDARSDAIY 1450
Query: 57 SIDIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDK-TSHTRSVIYRSS 113
S +G N I I+ E P ++LY SE+++++W ++ K +K T SVI ++S
Sbjct: 1451 SALYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTNTLSKANKWTGQNVSVIQKTS 1510
Query: 114 EKEINDMLIYHPSRQ-TGWNKCAVANNE--CDYLCLATPGRGGGLNYKCECPTHYTMVNG 170
+ D+ IYHPSRQ N CA + + C ++CL R C CP + +
Sbjct: 1511 AQPF-DLQIYHPSRQPQAPNPCAANDGKGPCSHMCLINHNRSAA----CACPHLMKLSSD 1565
Query: 171 --TCMAPSSFLIYAQRNILSRL-ITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDS 227
TC FL+YA+R+ + + I +P + + +P++ ++ +D+D ++YW D
Sbjct: 1566 KKTCYEMKKFLLYARRSEIRGVDIDNPYFNFITAFTVPDIDDVTVIDFDASEERLYWTDI 1625
Query: 228 KLQAIKRASENATRI 242
K Q IKRA N T +
Sbjct: 1626 KTQTIKRAFINGTGL 1640
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 126/254 (49%), Gaps = 22/254 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ W++WG I ++ LDG+++ VL+ A N ++++Y+E ++Y+ + + IE I
Sbjct: 2010 LFWTEWG--QMPCIGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERI 2067
Query: 59 DIE-GRNKITIVANIEDKPVTLTLYKSEIFYSN--WDKRSIEKYDKTSHTRSVIYRSSEK 115
D+E G N+ +++ ++ ++ + I++S+ S+ + K T ++ R+
Sbjct: 2068 DLETGGNREMVLSGSNVDMFSVAVFGAYIYWSDRAHANGSVRRGHKNDATETITMRTGLG 2127
Query: 116 -EINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG-TCM 173
+ ++ I++ R+ G N CA N C LCL G C C Y +G TC+
Sbjct: 2128 VNLKEVKIFNRVREKGTNVCARDNGGCKQLCLYR----GNSRRTCACAHGYLAEDGVTCL 2183
Query: 174 APSSFLIYAQRNILSRL-ITDPT--QCPDSPYEIPN-VKNIKALDYDPVAR-----QIYW 224
+L+Y+ R IL + ++D T P PYE P KN+ AL +D R +I++
Sbjct: 2184 RHEGYLLYSGRTILKSIHLSDETNLNSPIRPYENPRYFKNVIALAFDYNQRRKGTNRIFY 2243
Query: 225 IDSKLQAIKRASEN 238
D+ I+ +N
Sbjct: 2244 SDAHFGNIQLIKDN 2257
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 14/245 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKAN-SLTVNYDEKRVYYVNLLSSSIESID 59
+ W+D G TI + +DG+ +L K L+++Y E ++Y+++ + +I +
Sbjct: 1707 LYWTD-----GNTINMANMDGSNSKILFQNQKEPVGLSIDYVENKLYWISSGNGTINRCN 1761
Query: 60 IEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEI 117
++G N I + E+ K LT+ ++++++ + + K I R+ +
Sbjct: 1762 LDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCSKRDGRNPTILRNKTSGV 1821
Query: 118 NDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAP 175
M +Y Q G N C + N C LCL T C C Y + +C
Sbjct: 1822 VHMKVYDKEAQQGSNSCQLNNGGCSQLCLPT----SETTRTCMCTVGYYLQKNRMSCQGI 1877
Query: 176 SSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
SFL+Y+ + + +P+ D+ I +D+ IYW D I RA
Sbjct: 1878 ESFLMYSVHEGIRGIPLEPSDKMDALMPISGTSFAVGIDFHAENDTIYWTDMGFNKISRA 1937
Query: 236 SENAT 240
+ T
Sbjct: 1938 KRDQT 1942
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 14 IERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
I R +DGT +SV++ + +LT++Y +R+Y+ + + IE +++G ++ +
Sbjct: 3155 IGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWAD--ENHIEFSNMDGSHRHKVPNQ 3212
Query: 72 IEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDMLIYHPSRQTGW 131
+ LTL++ I++++ +S+ + KTS + S I D+ +YH RQ
Sbjct: 3213 DIPGVIALTLFEDYIYWTDGKTKSLSRAHKTSGADRLSLIYSWHAITDIQVYHSYRQPDV 3272
Query: 132 NK--CAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV--NGTCMA 174
+K C + N C +LCL PG+ + C CPT++ + N TC++
Sbjct: 3273 SKHLCMINNGGCSHLCLLAPGK----THTCACPTNFYLAADNRTCLS 3315
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 1 MLWSDWGAG----NGGTIERSALDGTQRSVLL--HKVKANSLTVNYDEKRVYYVNLLSSS 54
M W+DW + G IE++ +DG R + + + N LT+++ +Y+ +
Sbjct: 659 MYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAYYDH 718
Query: 55 IESIDIEGRNKITIVANIE-DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSS 113
IE + + G ++ + + E + P L+ + + +F++++ SI + D + + + R
Sbjct: 719 IEKVFLNGTHRKIVYSGRELNHPFGLSHHGNYVFWTDYMNGSIFQLDLIT-SEVTLLRHE 777
Query: 114 EKEINDMLIYHPSRQTGWNKCAVANNECDYLCLATPG 150
+ + IY P +Q G N C V N C LCLA PG
Sbjct: 778 RPPLFGLQIYDPRKQQGDNMCRVNNGGCSTLCLAIPG 814
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W++W + +I RS L G V++ + N LT++Y +++Y+ + IE
Sbjct: 2332 MFWTNWNEQHP-SIMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERC 2390
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSS--EKE 116
+ +G + IV + ++L +Y + IF+S+W +R+I + +K + + I RS +
Sbjct: 2391 EYDGSQRHVIVKSGPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQP 2450
Query: 117 INDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKC 159
+ + + + + + CA+ N C LCL TP G +N C
Sbjct: 2451 MGIIAVANDTNSCELSPCALLNGGCHDLCLLTP--NGRVNCSC 2491
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 8 AGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNK 65
G+ IE +A+DGT R +L+ K + L V+Y +R+Y+ + S I S+ +G N
Sbjct: 4046 VGDHSHIEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNS 4105
Query: 66 ITIVANIEDKPVTLTLYKSEIF----YSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDML 121
+ V++ K L ++ +IF Y K + + K H + + +L
Sbjct: 4106 VVSVSS---KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHGSVEYLALNIDKTKGVL 4162
Query: 122 IYHPSRQTGW-NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTC 172
I H +Q N C + C++LCL P C CP ++NGTC
Sbjct: 4163 ISHRYKQLDLPNPC--LDLACEFLCLLNPSGA-----TCVCPEGKYLINGTC 4207
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 120/261 (45%), Gaps = 31/261 (11%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKV--KANSLTVNYDEKRVYYVNLLSSSIESI 58
+ ++D+G N +ER +DG R+ ++ + +L ++ K VY+V+L + +
Sbjct: 340 LFFTDYG--NVAKVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVV 397
Query: 59 DIEGRNKITIVANIEDKPV-TLTLYKSEIFYSNWDKRSIEKYDKTSHT--RSVIYRSSEK 115
D +G+N+ T++ + + + +T+++ ++ +N D +I + ++ + T S+I +
Sbjct: 398 DYQGKNRHTVIQGRQVRHLYGITVFEDYLYATNSDNYNIVRINRFNGTDIHSLIKIENAW 457
Query: 116 EINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGL-----NYK---CECPTHYTM 167
I IY Q V ++ C+ PG + +YK C C T + +
Sbjct: 458 GIR---IYQKRTQP-----TVRSHACEVDPYGMPGGCSHICLLSSSYKTRTCRCRTGFNL 509
Query: 168 VNG--TCMAPSS--FLIYAQ-RNILSRLITDPTQCPDSPYEIP--NVKNIKALDYDPVAR 220
+ +C P + FL Y + R + R + T+ D Y IP N+ N +ALD+
Sbjct: 510 GSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNTKIADE-YMIPIENLVNPRALDFHAETN 568
Query: 221 QIYWIDSKLQAIKRASENATR 241
IY+ D+ I R + T
Sbjct: 569 YIYFADTTSFLIGRQKIDGTE 589
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 35 SLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVANIEDKPVTLTLYK--SEIFYSNWD 92
LTV++ +Y+++ IE ++G + T++A + P + L +F+++WD
Sbjct: 1339 GLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTLIAGAMEHPRAIALDPRYGILFWTDWD 1398
Query: 93 KR--SIEKYDKTSHTRSVIYRSSEKEI--NDMLIYHPSRQTGW 131
IE + R IY+ + N + + H ++ W
Sbjct: 1399 ANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVW 1441
>sp|Q9JI18|LRP1B_MOUSE Low-density lipoprotein receptor-related protein 1B OS=Mus musculus
GN=Lrp1b PE=2 SV=1
Length = 4599
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 129/255 (50%), Gaps = 19/255 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA----NSLTVNYDEKRVYYVNLLSSSIE 56
+ W+DW A N IE +++ G R + +K N LTV++ E+R+ + + S +I
Sbjct: 1392 LFWTDWDA-NFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFERRIVWTDARSDAIY 1450
Query: 57 SIDIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDK-TSHTRSVIYRSS 113
S +G N I I+ E P ++LY SE+++++W ++ K +K T SVI ++S
Sbjct: 1451 SAFYDGTNMIEIIRGHEYLSHPFAVSLYGSEVYWTDWRTNTLAKANKWTGQNVSVIQKTS 1510
Query: 114 EKEINDMLIYHPSRQ-TGWNKCAV--ANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG 170
+ D+ IYHPSRQ N CA C +LCL R C CP + +
Sbjct: 1511 AQPF-DLQIYHPSRQPQAPNPCAANEGRGPCSHLCLINHNRSAA----CACPHLMKLSSD 1565
Query: 171 --TCMAPSSFLIYAQRNILSRL-ITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDS 227
TC FL+YA+R+ + + I +P + + +P++ ++ +D+D ++YW D
Sbjct: 1566 KKTCYEMKKFLLYARRSEIRGVDIDNPYVNFITAFTVPDIDDVAVIDFDASEERLYWTDI 1625
Query: 228 KLQAIKRASENATRI 242
K Q I RA N T +
Sbjct: 1626 KTQTITRAFINGTGL 1640
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 126/254 (49%), Gaps = 22/254 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W++WG I ++ LDG+++ +++ N ++++Y+E ++Y+ + S IE I
Sbjct: 2010 LFWTEWG--QVPCIGKARLDGSEKVMIVSVGITWPNGISIDYEENKLYWCDARSDKIERI 2067
Query: 59 DIE-GRNKITIVANIEDKPVTLTLYKSEIFYSN--WDKRSIEKYDKTSHTRSVIYRSSEK 115
D++ G N+ +++ ++ ++ + I++S+ S+ + K T +V R+
Sbjct: 2068 DLDTGANREVLLSGSNVDLFSVAVFGAYIYWSDRAHANGSVRRGHKNDATETVTMRTGLG 2127
Query: 116 -EINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG-TCM 173
+ ++ I++ R+ G N CA N C LCL G C C Y +G TC+
Sbjct: 2128 VNLKEIKIFNRVREKGTNVCAKENGGCQQLCLYR----GNSRRTCACAHGYLAGDGVTCL 2183
Query: 174 APSSFLIYAQRNILSRL-ITDPT--QCPDSPYEIPN-VKNIKALDYDPVAR-----QIYW 224
+L+Y+ R IL + ++D T P PYE PN KNI AL +D R +I++
Sbjct: 2184 RHEGYLLYSGRTILKSIHLSDETNLNSPVRPYENPNYFKNIIALAFDYNQRREGTNRIFY 2243
Query: 225 IDSKLQAIKRASEN 238
D+ I+ +N
Sbjct: 2244 SDAHFGNIQLIKDN 2257
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 14/245 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKAN-SLTVNYDEKRVYYVNLLSSSIESID 59
+ W+D G TI + +DG+ +L K L+++Y E ++Y+++ + +I +
Sbjct: 1707 LYWTD-----GNTINMANMDGSNSKILFQNQKEPVGLSIDYVENKLYWISSGNGTINRCN 1761
Query: 60 IEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEI 117
++G N I + E+ K LT+ ++++++ + + +K I R+ +
Sbjct: 1762 LDGGNLEVIESMKEELTKATALTIMDKKLWWADQNLAQLGTCNKRDGRNPSILRNKTSGV 1821
Query: 118 NDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAP 175
M +Y Q G N C V N C LCL T C C Y + +C
Sbjct: 1822 VHMKVYDKEAQQGSNSCQVNNGGCSQLCLPT----SETTRTCMCTVGYYLQKNRMSCQGI 1877
Query: 176 SSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
SFL+Y+ + + +P D+ I +D+ IYW D L I RA
Sbjct: 1878 ESFLMYSVHEGIRGIPLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDMGLNKISRA 1937
Query: 236 SENAT 240
+ T
Sbjct: 1938 KRDQT 1942
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 14 IERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
I R +DGT +SV++ + +LT++Y R+Y+ + + IE +++G ++ +
Sbjct: 3155 IGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWAD--ENHIEFSNMDGSHRHKVPNQ 3212
Query: 72 IEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDMLIYHPSRQTGW 131
+ LTL++ I++++ +S+ + KTS + +S I D+ +YH RQ
Sbjct: 3213 DIPGVIALTLFEDYIYWTDGKTKSLSRVHKTSGADRLSLINSWHAITDIQVYHSYRQPDV 3272
Query: 132 NK--CAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV--NGTCMA 174
+K C V N C +LCL PG+ + C CPT++ + N TC++
Sbjct: 3273 SKHLCTVNNGGCSHLCLLGPGK----THTCACPTNFYLAADNRTCLS 3315
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 1 MLWSDWGAG----NGGTIERSALDGTQRSVLL--HKVKANSLTVNYDEKRVYYVNLLSSS 54
M W+DW + G IE++ +DG R V + + N LT+++ +Y+ +
Sbjct: 659 MYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSKMLWPNGLTLDFHTSTLYWCDAYYDH 718
Query: 55 IESIDIEGRNKITIVANIE-DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSS 113
IE + + G ++ + + E + P L+ + + +F++++ SI + D ++ +++ R
Sbjct: 719 IEKVFLNGTHRKVVYSGKELNHPFGLSHHGNYVFWTDYMNGSIFQLDLMTNEVTLL-RHE 777
Query: 114 EKEINDMLIYHPSRQTGWNKCAVANNECDYLCLATP 149
+ + IY P +Q G N C + N C LCLA P
Sbjct: 778 RAPLFGLQIYDPRKQQGDNMCRINNGGCGTLCLAIP 813
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 9/188 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W++W + +I R+ L G V++ + N LT+++ +++Y+ + IE
Sbjct: 2332 MFWTNWNEQHP-SIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERC 2390
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSS--EKE 116
+ +G + IV + ++L +Y S IF+S+W +R+I + +K + + I RS +
Sbjct: 2391 EYDGSQRHVIVKSGPGTFLSLAVYDSYIFWSDWGRRAILRSNKYTGGETKILRSDIPHQP 2450
Query: 117 INDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTCMAP- 175
+ + + + + + CA+ N C LCL TP G +N C + N C+
Sbjct: 2451 MGIIAVANDTNSCELSPCALLNGGCHDLCLLTP--DGRVNCSCR-GDRVLLANNRCVTKN 2507
Query: 176 SSFLIYAQ 183
SS IY++
Sbjct: 2508 SSCNIYSE 2515
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 9 GNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKI 66
G+ IE +A+DGT R VL+ K + LTV++ +R+Y+ + S I S+ +G + +
Sbjct: 4047 GDHSHIEEAAMDGTLRRVLVQKNLQRPTGLTVDHFGERIYWADFELSIIGSVLYDGSSPV 4106
Query: 67 TIVANIEDKPVTLTLYKSEIF----YSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDMLI 122
V++ K L ++ ++F Y K I + K H + + +L+
Sbjct: 4107 VSVSS---KQGLLHPHRIDVFEDYIYGAGPKNGIFRVQKFGHGSVEVLALGVDKTKSILV 4163
Query: 123 YHPSRQTGW-NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTC 172
H +Q N C + CD+LCL P C CP M+NGTC
Sbjct: 4164 SHRYKQLNLPNPCL--DLSCDFLCLLNPS-----GATCICPEGKYMMNGTC 4207
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKV--KANSLTVNYDEKRVYYVNLLSSSIESI 58
+ ++D+G N IER LDG R+ +++ + ++L ++ + VY+V+L + +
Sbjct: 340 LFFTDYG--NVPKIERCDLDGMNRTRIVYSKAEQPSALALDLVNRLVYWVDLYLDYVGVV 397
Query: 59 DIEGRNKITIVANIEDKPV-TLTLYKSEIFYSNWDKRSIEKYDKTSHT--RSVIYRSSEK 115
D +G+N+ TIV + K + +T+++ ++ ++ D +I + ++ + T S+I S +
Sbjct: 398 DYQGKNRHTIVQGRQVKHLYGITVFEDYLYATSSDNFNIIRINRFNGTDIHSIIKMESAR 457
Query: 116 EINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGL-----NYK---CECPTHYTM 167
I Y Q V ++ C+ PG + +YK C C T + M
Sbjct: 458 GIR---TYQKRTQP-----TVRSHACEVDAYGMPGGCSHICLLSSSYKTRTCRCRTGFNM 509
Query: 168 VNG--TCMAPSS--FLIYAQ-RNILSRLITDPTQCPDSPY-EIPNVKNIKALDYDPVARQ 221
+ +C P + FL Y + R + R + T+ D I N+ N +ALD+ A
Sbjct: 510 GSDGRSCKRPKNELFLFYGKGRPGIVRGMDLNTKIADECMIPIENLVNPRALDFHAEANY 569
Query: 222 IYWIDSKLQAIKRASENATR 241
IY+ D+ I R + T
Sbjct: 570 IYFADTTSFLIGRQKIDGTE 589
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 35 SLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVANIEDKPVTLTLYK--SEIFYSNWD 92
LTV++ +Y+++ IE ++G + T++A + P + L +F+++WD
Sbjct: 1339 GLTVDWIAGNIYWIDSNLDQIEVSKLDGSLRATLIAGAMEHPRAIALDPRYGILFWTDWD 1398
Query: 93 KR--SIEKYDKTSHTRSVIYRSSEKEI--NDMLIYHPSRQTGW 131
IE + R IY+ + N + + H R+ W
Sbjct: 1399 ANFPRIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFERRIVW 1441
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 20/96 (20%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTMV----NGTCMAPSS---FLIYAQRNILSRLITD 193
C C+ T G YKC C Y NG C + S FLI A ++ + ++ TD
Sbjct: 2978 CSQQCINTYG-----TYKCHCAEGYETQPDNPNG-CRSLSDEEPFLILADQHEIRKISTD 3031
Query: 194 PTQCPDSPYEI--PNVKNIKALDYDPVARQIYWIDS 227
S Y + + N+ ALD+D IYWIDS
Sbjct: 3032 -----GSNYTLLKQGLNNVIALDFDYREEFIYWIDS 3062
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKANSLTVNYDEKRVYYVNLLSSSIESIDI 60
+ W D NG I R L+G+ V+ + N+L V++ K +Y+ + IE +
Sbjct: 3057 IYWIDSSRPNGSRINRMCLNGSDIKVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKL 3116
Query: 61 EGRNKITIVANIEDKPVTLTL 81
G +V+ P L+L
Sbjct: 3117 NGLYPTVLVSKRLKFPRDLSL 3137
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 127/255 (49%), Gaps = 19/255 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA----NSLTVNYDEKRVYYVNLLSSSIE 56
+ W+DW A + IE +++ G R + + + N LTV+Y EKR+ +++ S +I
Sbjct: 1399 LFWTDWDA-SLPRIEAASMSGAGRRTIHKETGSGGWPNGLTVDYLEKRILWIDARSDAIY 1457
Query: 57 SIDIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDK-TSHTRSVIYRSS 113
S +G I ++ E P +TLY E+++++W ++ K +K T H +V+ R++
Sbjct: 1458 SALYDGTGHIEVLRGHEYLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTN 1517
Query: 114 EKEINDMLIYHPSRQT-GWNKCAV--ANNECDYLCLATPGRGGGLNYKCECPTHYTMV-- 168
+ D+ +YHPSRQ N C C +LCL R C CP +
Sbjct: 1518 TQPF-DLQVYHPSRQPLAPNPCEANGGKGPCSHLCLINYNR----TLSCACPHLMKLDKD 1572
Query: 169 NGTCMAPSSFLIYA-QRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDS 227
N TC FL+YA Q I I +P + +P++ N+ +DYD V ++IYW D
Sbjct: 1573 NTTCYEFKKFLLYARQMEIRGVDIDNPYYNYIISFTVPDIDNVTVVDYDAVEQRIYWSDV 1632
Query: 228 KLQAIKRASENATRI 242
+ Q IKRA N T +
Sbjct: 1633 RTQTIKRAFINGTGV 1647
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG + I + +DGT RSV++ N LT++Y R+Y+ + IE
Sbjct: 3156 LYWTDWG--DHSLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIEFA 3213
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
++G N+ T+++ LTL++ I++++W+ +SI + KT+ + S+
Sbjct: 3214 SLDGSNRHTVLSQDIPHIFALTLFEDYIYWTDWETKSINRAHKTTGANKTLLISTLHRPM 3273
Query: 119 DMLIYHPSRQTGW--NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTM 167
D+ IYHP RQ + C N C LCL +PG G +KC CPT++ +
Sbjct: 3274 DIHIYHPYRQPDVPNHPCKTNNAGCSNLCLLSPGGG----HKCACPTNFYL 3320
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 138/256 (53%), Gaps = 22/256 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ W++WG IERS LDGT+R VL++ + N ++V+Y++ ++Y+ + + IE I
Sbjct: 2018 LFWTEWG--QYPRIERSRLDGTERMVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERI 2075
Query: 59 DIE-GRNKITIVANIEDKPVTLTLYKSEIFYSNWDKR--SIEKYDKTSHTRSVIYRSS-E 114
D+E G N+ ++++ ++++++ I++S+ SI++ K + T SV R+
Sbjct: 2076 DLETGENREVVLSSDNMDMFSVSVFEDYIYWSDRTHANGSIKRGSKDNATESVSLRTGIG 2135
Query: 115 KEINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG-TCM 173
++ D+ +++ +RQ G N CA N C LCL RGGG C C +G +C
Sbjct: 2136 VQLKDIKVFNRARQKGTNVCAQNNGGCQQLCLF---RGGG-RRTCACAHGMLSEDGVSCR 2191
Query: 174 APSSFLIYAQRNILSRL-ITDPT--QCPDSPYE-IPNVKNIKALDYD-----PVARQIYW 224
+L+Y++R IL + ++D P P+E ++KN+ AL +D + +I++
Sbjct: 2192 DYDGYLLYSERTILKSIHLSDENNLNAPIKPFEDAEHMKNVIALAFDYRYGTKGSNRIFY 2251
Query: 225 IDSKLQAIKRASENAT 240
D I++ +++ T
Sbjct: 2252 SDIHFGNIQQINDDGT 2267
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 15/246 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKAN-SLTVNYDEKRVYYVNLLSSSIESID 59
+ W+D G I + +DG+ R++L + L ++Y E ++Y+++ + +I +
Sbjct: 1714 LYWTD-----GDNISVANMDGSNRTLLFTNQRGPVGLAIDYPESKLYWISSGNGTINRCN 1768
Query: 60 IEGRNKITIVA--NIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEI 117
++G + IVA + K L + ++++++ + +K T + R+S +
Sbjct: 1769 LDGSDLEVIVAVKSQLSKATALAIMGDKLWWADQASERMGTCNKKDGTEVTVLRNSTTLV 1828
Query: 118 NDMLIYHPS-RQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMA 174
M +Y S +Q G N C+V N +C LCL T + C C Y++ +G +C
Sbjct: 1829 MLMKVYDESIQQAGSNPCSVNNGDCSQLCLPT----SETSRSCMCTAGYSLKSGQQSCEG 1884
Query: 175 PSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKR 234
SFL+Y+ + + DP D+ + +D+ IYW+D L I R
Sbjct: 1885 VGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISR 1944
Query: 235 ASENAT 240
A + T
Sbjct: 1945 AKRDQT 1950
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M WSDWG N IE +A+DGT R L+ L V+Y +R+Y+ + S I SI
Sbjct: 4014 MYWSDWG--NHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSI 4071
Query: 59 DIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
+ G + + + N + P ++ +++ I+ + I K K H S
Sbjct: 4072 RLNGTDPVVAIDNKKGLSHPFSIDIFEDYIYGVTYINNRIFKIHKFGHKSVTNLTSGLNH 4131
Query: 117 INDMLIYHPSRQTG-WNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTCM 173
D+++YH +Q N C +C++LCL +P C CP + NGTC+
Sbjct: 4132 ATDVVLYHQYKQPEVTNPC--DRKKCEWLCLLSPS-----GPVCTCPNGKRLDNGTCV 4182
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 1 MLWSDWGA----GNGGTIERSALDGTQRSVLLHK---VKANSLTVNYDEKRVYYVNLLSS 53
M W+DW G IER+ +DG+ R+V + + N L+++ K +Y+V+
Sbjct: 664 MYWTDWEEDPKDSKRGKIERAWMDGSNRNVFITSKTVLWPNGLSLDIPAKILYWVDAFYD 723
Query: 54 SIESIDIEGRNKITIVANIE-DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRS 112
IE + + G + + E + L Y S +F++ + SI + D++S S++ R+
Sbjct: 724 RIEMVYLNGTERKIVYEGPELNHAFGLCHYSSFLFWTEYRSGSIYRLDQSSKAVSLL-RN 782
Query: 113 SEKEINDMLIYHPSRQ-TGWNKCAVANNECDYLCLATP 149
I ++ +Y +Q G NKC V N C LCLATP
Sbjct: 783 ERPPIFEIRMYDAQQQQVGSNKCRVNNGGCSSLCLATP 820
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W++W + +I R+ L G +++ + N L +++ +++Y+ + IE
Sbjct: 2340 MFWTNWNEQHP-SIMRATLSGANVLIIIDQDIRTPNGLAIDHRAEKIYFSDATLDKIERC 2398
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSS--EKE 116
+ +G ++ I+ + P L +Y IF+++W +R++++ +K T + R ++
Sbjct: 2399 EYDGSHRHVILKSEPVHPFGLAVYGDYIFWTDWVRRAVQRANKYVGTDMKLLRVDIPQQP 2458
Query: 117 INDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKC 159
+ + + + + + C V N C LCL TP G +N C
Sbjct: 2459 MGIIAVANDTDSCELSPCRVNNGGCQDLCLLTP--KGHVNCSC 2499
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 33/252 (13%)
Query: 14 IERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
+ER +DG R+ L+ V + +T++ + VY+ + IE +D EG+N+ TI+
Sbjct: 350 VERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKNRHTIIQG 409
Query: 72 IE-DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEI-------NDMLIY 123
I + LT++++ ++ +N D + ++ KTS R + S+E ++ + IY
Sbjct: 410 ILIEHLYGLTVFENYLYATNSDNANAQQ--KTSVIRVNRFNSTEYQVVTRVDKGGALHIY 467
Query: 124 HPSRQTGWNKCAVANNECDYLCLATPGRGG-----GLNYK---CECPTHYTMVNG--TCM 173
H RQ V ++ C+ PG G ++K C C + +++ + +C
Sbjct: 468 HQRRQP-----TVRSHACEPDQFGKPGGCSDICLLGNSHKSRTCRCRSGFSLGSDGKSCK 522
Query: 174 APSS--FLIYAQ-RNILSRLITDPTQCPDSPYEIP--NVKNIKALDYDPVARQIYWIDSK 228
P FL+Y + R + R + + PD + IP N+ N +ALD+ IY+ D+
Sbjct: 523 KPEHELFLVYGKGRPGIIRGMDMGAKVPDE-HMIPIENLMNPRALDFHAETGFIYFADTT 581
Query: 229 LQAIKRASENAT 240
I R + T
Sbjct: 582 SYLIGRQKIDGT 593
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 20/112 (17%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTMVNG---TCMAPSS---FLIYAQRNILSRLITDP 194
C C+ T G +YKC C Y + +C A + FLI+A R L +L D
Sbjct: 2989 CSQKCINTLG-----SYKCLCIEGYKLKPDNPTSCKAVTDEEPFLIFANRYYLRKLNLD- 3042
Query: 195 TQCPDSPYEI--PNVKNIKALDYDPVARQIYWIDSKLQA--IKRASENATRI 242
S Y + + N ALD+D + IYW D Q I+R N + +
Sbjct: 3043 ----GSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHINGSNV 3090
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 31/261 (11%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA----NSLTVNYDEKRVYYVNLLSSSIE 56
+ W+DW A + IE +++ G R + + + N LTV+Y EKR+ +++ S +I
Sbjct: 1401 LFWTDWDA-SLPRIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAIY 1459
Query: 57 SIDIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDK-TSHTRSVIYRSS 113
S +G + ++ E P +TLY E+++++W ++ K +K T H +V+ R++
Sbjct: 1460 SARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTN 1519
Query: 114 EKEINDMLIYHPSRQ-TGWNKCAVANNE--CDYLCLATPGRGGGLNYKCECPTHYTMV-- 168
+ D+ +YHPSRQ N C + C +LCL R C CP +
Sbjct: 1520 TQPF-DLQVYHPSRQPMAPNPCEANGGQGPCSHLCLINYNR----TVSCACPHLMKLHKD 1574
Query: 169 NGTCMAPSSFLIYAQRNILSRLITDPTQCPDSPY-------EIPNVKNIKALDYDPVARQ 221
N TC FL+YA++ + + D +PY +P++ N+ LDYD ++
Sbjct: 1575 NTTCYEFKKFLLYARQMEIRGVDLD------APYYNYIISFTVPDIDNVTVLDYDAREQR 1628
Query: 222 IYWIDSKLQAIKRASENATRI 242
+YW D + QAIKRA N T +
Sbjct: 1629 VYWSDVRTQAIKRAFINGTGV 1649
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 140/259 (54%), Gaps = 24/259 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ W++WG IERS LDGT+R VL++ + N ++V+Y + ++Y+ + + IE I
Sbjct: 2022 LFWTEWG--QYPRIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERI 2079
Query: 59 DIE-GRNKITIVANIEDKPVTLTLYKSEIFYSNWDKR--SIEKYDKTSHTRSVIYRSS-E 114
D+E G N+ ++++ ++++++ I++S+ SI++ K + T SV R+
Sbjct: 2080 DLETGENREVVLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGSKDNATDSVPLRTGIG 2139
Query: 115 KEINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG-TCM 173
++ D+ +++ RQ G N CAVAN C LCL GRG C C +G +C
Sbjct: 2140 VQLKDIKVFNRDRQKGTNVCAVANGGCQQLCLYR-GRG---QRACACAHGMLAEDGASCR 2195
Query: 174 APSSFLIYAQRNILSRL-ITDP--TQCPDSPYEIP-NVKNIKALDYDPVA-------RQI 222
+ +L+Y++R IL + ++D P P+E P ++KN+ AL +D A +I
Sbjct: 2196 EYAGYLLYSERTILKSIHLSDERNLNAPVQPFEDPEHMKNVIALAFDYRAGTSPGTPNRI 2255
Query: 223 YWIDSKLQAIKRASENATR 241
++ D I++ +++ +R
Sbjct: 2256 FFSDIHFGNIQQINDDGSR 2274
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 10/171 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG + I R +DG+ RSV++ N LT++Y +R+Y+ + IE
Sbjct: 3159 LYWTDWG--DHSLIGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFA 3216
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
++G N+ +++ LTL++ +++++W+ +SI + KT+ T + S+
Sbjct: 3217 SLDGSNRHVVLSQDIPHIFALTLFEDYVYWTDWETKSINRAHKTTGTNKTLLISTLHRPM 3276
Query: 119 DMLIYHPSRQTGW--NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTM 167
D+ ++H RQ + C V N C LCL +PG G +KC CPT++ +
Sbjct: 3277 DLHVFHALRQPDVPNHPCKVNNGGCSNLCLLSPGGG----HKCACPTNFYL 3323
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 17/248 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKAN-SLTVNYDEKRVYYVNLLSSSIESID 59
+ W+D G I + +DG+ R++L K L +++ E ++Y+++ + +I +
Sbjct: 1716 LYWTD-----GDNISMANMDGSNRTLLFSGQKGPVGLAIDFPESKLYWISSGNHTINRCN 1770
Query: 60 IEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEI 117
++G I A K L + ++++++ + K + SV+ R+S +
Sbjct: 1771 LDGSGLEVIDAMRSQLGKATALAIMGDKLWWADQVSEKMGTCSKADGSGSVVLRNSTTLV 1830
Query: 118 NDMLIYHPSRQ---TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TC 172
M +Y S Q G N C+V N +C LCL T C C Y++ +G C
Sbjct: 1831 MHMKVYDESIQLDHKGTNPCSVNNGDCSQLCLPT----SETTRSCMCTAGYSLRSGQQAC 1886
Query: 173 MAPSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAI 232
SFL+Y+ + + DP D+ + +D+ IYW+D L I
Sbjct: 1887 EGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTI 1946
Query: 233 KRASENAT 240
RA + T
Sbjct: 1947 SRAKRDQT 1954
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M WSDWG N IE +A+DGT R L+ L V+Y +R+Y+ + S I SI
Sbjct: 4015 MYWSDWG--NHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSI 4072
Query: 59 DIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
+ G + I + P ++ +++ I+ + + K K H+ V
Sbjct: 4073 RLNGTDPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGHSPLVNLTGGLSH 4132
Query: 117 INDMLIYHPSRQTG-WNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTC 172
+D+++YH +Q N C +C++LCL +P C CP + NGTC
Sbjct: 4133 ASDVVLYHQHKQPEVTNPC--DRKKCEWLCLLSPS-----GPVCTCPNGKRLDNGTC 4182
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 1 MLWSDWGA----GNGGTIERSALDGTQRSVLLHK---VKANSLTVNYDEKRVYYVNLLSS 53
M W+DW G +ER+ +DG+ R + + + N L+++ R+Y+V+
Sbjct: 662 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 721
Query: 54 SIESIDIEGRNKITIVANIE-DKPVTLTLYKSEIFYSNWDKRSIEKYDKT---SHTRSVI 109
IE+I + G ++ + E + L + + +F++ + S+ + ++ + +
Sbjct: 722 RIETILLNGTDRKIVYEGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGVGGAPPTVTL 781
Query: 110 YRSSEKEINDMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTM- 167
RS I ++ +Y +Q G NKC V N C LCLATPG + +C C +
Sbjct: 782 LRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG-----SRQCACAEDQVLD 836
Query: 168 VNG-TCMAPSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIK 211
+G TC+A S++ P QC + N + I+
Sbjct: 837 ADGVTCLANPSYV-------------PPPQCQPGEFACANSRCIQ 868
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 22/194 (11%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W++W + +I R+AL G L+ K N L +++ +++Y+ + IE
Sbjct: 2346 MFWTNWNEQHP-SIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERC 2404
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSS--EKE 116
+ +G ++ I+ + P L +Y IF+++W +R++++ +K + + R ++
Sbjct: 2405 EYDGSHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKHVGSNMKLLRVDIPQQP 2464
Query: 117 INDMLIYHPSRQTGWNKCAVANNECDYLCLAT-------PGRGG----------GLNYKC 159
+ + + + + + C + N C LCL T RGG +N C
Sbjct: 2465 MGIIAVANDTNSCELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRILQDDLTCRAVNSSC 2524
Query: 160 ECPTHYTMVNGTCM 173
+ NG C+
Sbjct: 2525 RAQDEFECANGECI 2538
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 14 IERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
+ER +DG R+ L+ V + +T++ + VY+ + IE +D EG+ + TI+
Sbjct: 348 VERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTIIQG 407
Query: 72 IE-DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEI-------NDMLIY 123
I + LT++++ ++ +N D + ++ KTS R + S+E ++ + IY
Sbjct: 408 ILIEHLYGLTVFENYLYATNSDNANAQQ--KTSVIRVNRFNSTEYQVVTRVDKGGALHIY 465
Query: 124 HPSRQTGWNKCAVANNE------CDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAP 175
H RQ A N++ C +CL C C + +++ + +C P
Sbjct: 466 HQRRQPRVRSHACENDQYGKPGGCSDICLLANSHKA---RTCRCRSGFSLGSDGKSCKKP 522
Query: 176 SS--FLIYAQ-RNILSRLITDPTQCPDSPYEIP--NVKNIKALDYDPVARQIYWIDSKLQ 230
FL+Y + R + R + + PD + IP N+ N +ALD+ IY+ D+
Sbjct: 523 EHELFLVYGKGRPGIIRGMDMGAKVPDE-HMIPIENLMNPRALDFHAETGFIYFADTTSY 581
Query: 231 AIKRASENAT 240
I R + T
Sbjct: 582 LIGRQKIDGT 591
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 20/112 (17%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTMVNG---TCMAPSS---FLIYAQRNILSRLITDP 194
C C+ T G +YKC C Y G +C A + FLI+A R L +L D
Sbjct: 2992 CSQRCINTHG-----SYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFANRYYLRKLNLD- 3045
Query: 195 TQCPDSPYEI--PNVKNIKALDYDPVARQIYWIDSKLQA--IKRASENATRI 242
S Y + + N ALD+D + IYW D Q I+R N + +
Sbjct: 3046 ----GSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNV 3093
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 31/261 (11%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA----NSLTVNYDEKRVYYVNLLSSSIE 56
+ W+DW A + IE +++ G R + + + N LTV+Y EKR+ +++ S +I
Sbjct: 1402 LFWTDWDA-SLPRIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAIY 1460
Query: 57 SIDIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDK-TSHTRSVIYRSS 113
S +G + ++ E P +TLY E+++++W ++ K +K T H +V+ R++
Sbjct: 1461 SARYDGSGHMEVLRGHEFLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTN 1520
Query: 114 EKEINDMLIYHPSRQ-TGWNKCAV--ANNECDYLCLATPGRGGGLNYKCECPTHYTMV-- 168
+ D+ +YHPSRQ N C C +LCL R C CP +
Sbjct: 1521 TQPF-DLQVYHPSRQPMAPNPCEANGGRGPCSHLCLINYNR----TVSCACPHLMKLHKD 1575
Query: 169 NGTCMAPSSFLIYAQRNILSRLITDPTQCPDSPY-------EIPNVKNIKALDYDPVARQ 221
N TC FL+YA++ + + D +PY +P++ N+ LDYD ++
Sbjct: 1576 NTTCYEFKKFLLYARQMEIRGVDLD------APYYNYIISFTVPDIDNVTVLDYDAREQR 1629
Query: 222 IYWIDSKLQAIKRASENATRI 242
+YW D + QAIKRA N T +
Sbjct: 1630 VYWSDVRTQAIKRAFINGTGV 1650
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 126/227 (55%), Gaps = 17/227 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ W++WG + IERS LDGT+R VL++ + N ++V+Y ++Y+ + IE I
Sbjct: 2023 LFWTEWG--HYPRIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERI 2080
Query: 59 DIE-GRNKITIVANIEDKPVTLTLYKSEIFYSN--WDKRSIEKYDKTSHTRSVIYRSS-E 114
D+E G N+ ++++ ++++++ I++S+ SI++ K + T SV R+
Sbjct: 2081 DLETGENREVVLSSNNMDMFSVSVFEDFIYWSDRTHANGSIKRGCKDNATDSVPLRTGIG 2140
Query: 115 KEINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG-TCM 173
++ D+ +++ RQ G N CAVAN C LCL RGGG C C +G +C
Sbjct: 2141 VQLKDIKVFNRDRQKGTNVCAVANGGCQQLCLY---RGGG-QRACACAHGMLAEDGASCR 2196
Query: 174 APSSFLIYAQRNILSRL-ITDP--TQCPDSPYEIP-NVKNIKALDYD 216
+ +L+Y++R IL + ++D P P+E P ++KN+ AL +D
Sbjct: 2197 EYAGYLLYSERTILKSIHLSDERNLNAPVQPFEDPEHMKNVIALAFD 2243
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG + I R +DG+ RS+++ N LTV+Y +R+Y+ + IE
Sbjct: 3160 LYWTDWG--DHSLIGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDYIEFA 3217
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
++G N+ +++ LTL++ +++++W+ +SI + KT+ + S+
Sbjct: 3218 SLDGSNRHVVLSQDIPHIFALTLFEDYVYWTDWETKSINRAHKTTGANKTLLISTLHRPM 3277
Query: 119 DMLIYHPSRQTGW--NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTM 167
D+ ++H RQ + C V N C LCL +PG G +KC CPT++ +
Sbjct: 3278 DLHVFHALRQPDVPNHPCKVNNGGCSNLCLLSPGGG----HKCACPTNFYL 3324
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 111/249 (44%), Gaps = 19/249 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKAN-SLTVNYDEKRVYYVNLLSSSIESID 59
+ W+D G I + +DG+ ++L K L +++ E ++Y+++ + +I +
Sbjct: 1717 LYWTD-----GDNISMANMDGSNHTLLFSGQKGPVGLAIDFPESKLYWISSGNHTINRCN 1771
Query: 60 IEGRNKITIVANIED---KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
++G +++ ++ + K L + ++++++ + +K + SV+ R+S
Sbjct: 1772 LDG-SELEVIDTMRSQLGKATALAIMGDKLWWADQVSEKMGTCNKADGSGSVVLRNSTTL 1830
Query: 117 INDMLIYHPSRQ---TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--T 171
+ M +Y S Q G N C+V N +C LCL T C C Y++ +G
Sbjct: 1831 VMHMKVYDESIQLEHEGTNPCSVNNGDCSQLCLPT----SETTRSCMCTAGYSLRSGQQA 1886
Query: 172 CMAPSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQA 231
C SFL+Y+ + + DP D+ + +D+ IYW+D L
Sbjct: 1887 CEGVGSFLLYSVHEGIRGIPLDPNDKSDALVPVSGTSLAVGIDFHAENDTIYWVDMGLST 1946
Query: 232 IKRASENAT 240
I RA + T
Sbjct: 1947 ISRAKRDQT 1955
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M WSDWG N IE +A+DGT R L+ L V+Y +R+Y+ + S I SI
Sbjct: 4016 MYWSDWG--NHPKIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSI 4073
Query: 59 DIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
+ G + I + P ++ +++ I+ + + K K H+ +
Sbjct: 4074 RLNGTDPIVAADSKRGLSHPFSIDVFEDYIYGVTYINNRVFKIHKFGHSPLINLTGGLSH 4133
Query: 117 INDMLIYHPSRQTG-WNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTC 172
+D+++YH +Q N C +C++LCL +P C CP + NGTC
Sbjct: 4134 ASDVVLYHQHKQPEVTNPC--DRKKCEWLCLLSPS-----GPVCTCPNGKRLDNGTC 4183
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 31/231 (13%)
Query: 1 MLWSDWGA----GNGGTIERSALDGTQRSVLLHK---VKANSLTVNYDEKRVYYVNLLSS 53
M W+DW G +ER+ +DG+ R + + + N L+++ R+Y+V+
Sbjct: 663 MYWTDWEEDPKDSRRGRLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYD 722
Query: 54 SIESIDIEGRNKITIVANIE-DKPVTLTLYKSEIFYSNWDKRSIEKYDKT---SHTRSVI 109
IE+I + G ++ + E + L + + +F++ + S+ + ++ + +
Sbjct: 723 RIETILLNGTDRKIVYEGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGVAGAPPTVTL 782
Query: 110 YRSSEKEINDMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTM- 167
RS I ++ +Y +Q G NKC V N C LCLATPG + +C C +
Sbjct: 783 LRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG-----SRQCACAEDQVLD 837
Query: 168 VNG-TCMA-----------PSSFLIYAQRNILSRLITD-PTQCPDSPYEIP 205
+G TC+A P F R I R D C D+ E P
Sbjct: 838 TDGVTCLANPSYVPPPQCQPGEFACANNRCIQERWKCDGDNDCLDNSDEAP 888
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 22/226 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W++W + +I R+AL G L+ K N L +++ +++Y+ + IE
Sbjct: 2347 MFWTNWNELHP-SIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERC 2405
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSS--EKE 116
+ +G ++ I+ + P L +Y IF+++W +R++++ +K + + R ++
Sbjct: 2406 EYDGSHRYVILKSEPVHPFGLAVYGEHIFWTDWVRRAVQRANKYVGSDMKLLRVDIPQQP 2465
Query: 117 INDMLIYHPSRQTGWNKCAVANNECDYLCLAT-------PGRGGGL---NYKCECPTHYT 166
+ + + + + + C + N C LCL T RGG + ++ C
Sbjct: 2466 MGIIAVANDTNSCELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRILQEDFTCR------ 2519
Query: 167 MVNGTCMAPSSFLIYAQRNILSRLITDP-TQCPDSPYEIPNVKNIK 211
VN +C A F I L D + C D E P+ N +
Sbjct: 2520 AVNSSCRAQDEFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSR 2565
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 14 IERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
+ER +DG R+ L+ V + +T++ + VY+ + IE +D EG+ + TI+
Sbjct: 349 VERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTIIQG 408
Query: 72 IE-DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEI-------NDMLIY 123
I + LT++++ ++ +N D + ++ KTS R + S+E ++ + IY
Sbjct: 409 ILIEHLYGLTVFENYLYATNSDNANTQQ--KTSVIRVNRFNSTEYQVVTRVDKGGALHIY 466
Query: 124 HPSRQTGWNKCAVANNE------CDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAP 175
H RQ A N++ C +CL C C + +++ + +C P
Sbjct: 467 HQRRQPRVRSHACENDQYGKPGGCSDICLLANSHKA---RTCRCRSGFSLGSDGKSCKKP 523
Query: 176 SS--FLIYAQ-RNILSRLITDPTQCPDSPYEIP--NVKNIKALDYDPVARQIYWIDSKLQ 230
FL+Y + R + R + + PD + IP N+ N +ALD+ IY+ D+
Sbjct: 524 EHELFLVYGKGRPGIIRGMDMGAKVPDE-HMIPIENLMNPRALDFHAETGFIYFADTTSY 582
Query: 231 AIKRASENAT 240
I R + T
Sbjct: 583 LIGRQKIDGT 592
Score = 38.5 bits (88), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 20/112 (17%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTMVNG---TCMAPSS---FLIYAQRNILSRLITDP 194
C LC+ T G +YKC C Y G +C A + FLI+A R L +L D
Sbjct: 2993 CSQLCINTHG-----SYKCLCVEGYAPRGGDPHSCKAVTDEEPFLIFANRYYLRKLNLD- 3046
Query: 195 TQCPDSPYEI--PNVKNIKALDYDPVARQIYWIDSKLQA--IKRASENATRI 242
S Y + + N ALD+D + IYW D Q I+R N + +
Sbjct: 3047 ----GSNYTLLKQGLNNAVALDFDYREQMIYWTDVTTQGSMIRRMHLNGSNV 3094
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLH-KVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG + I R +DGT ++V++ K++ N++T++Y +Y+ + IE
Sbjct: 3337 VYWADWG--DHAYIARIGMDGTNKTVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFS 3394
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D+EG ++ T+ P LT+++ +F+++W+ R++EK +K + V+ ++ +
Sbjct: 3395 DLEGHHRHTVYDGTLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPF 3454
Query: 119 DMLIYHPSRQTGW-NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV 168
D+ + HP RQ N CA N C +LCL + GG + CECP + V
Sbjct: 3455 DIHVLHPYRQPIMSNPCATNNGGCSHLCLI---KAGGRGFTCECPDDFQTV 3502
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 132/251 (52%), Gaps = 17/251 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M WSDWG + IER+++DGT R+V++ + L+++Y + +Y+++ IE
Sbjct: 1569 MFWSDWG--HHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFC 1626
Query: 59 DIEGRNKITIVAN--IEDKPVTLTLYKSEIFYSNWDKRSIEKYDK-TSHTRSVIYRSSEK 115
D +G+N+ ++A+ + P LTL++ +F+++ + + +K +SV+ S +
Sbjct: 1627 DYDGQNRRQVIASDLVLHHPHALTLFEDSVFWTDRGTHQVMQANKWHGRNQSVVMYSVPQ 1686
Query: 116 EINDMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGT--C 172
+ ++ HPSRQ + N CA A C +LCL + +Y C CP+ + + + + C
Sbjct: 1687 PLG-IIAIHPSRQPSSPNPCASAT--CSHLCLLSAQE--PRHYSCACPSGWNLSDDSVNC 1741
Query: 173 M-APSSFLIYAQRNILSRLITDP-TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQ 230
+ FLI + N++ + DP + D+ I +++ +++D + IYW+++ +
Sbjct: 1742 VRGDQPFLISVRENVIFGISLDPEVKSNDAMVPISGIQHGYDVEFDDSEQFIYWVENPGE 1801
Query: 231 AIKRASENATR 241
+ ++ + R
Sbjct: 1802 IHRVKTDGSNR 1812
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 100/196 (51%), Gaps = 9/196 (4%)
Query: 1 MLWSDWGAGNGG-TIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIES 57
+ +SDWG+ +G +ER+ +DG+ R L+ +T++ KRVY+V+ IE+
Sbjct: 523 LFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYWVDSRYDYIET 582
Query: 58 IDIEGRNKITIV--ANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEK 115
+ +G + T+ ++ P ++L++ +F+++W K ++ K +K + T +Y S
Sbjct: 583 VTYDGIQRKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKANKFTDTNPQVYHQSSL 642
Query: 116 EINDMLIYHPSRQ-TGWNKCAVANNECDYLC-LATPGRGGGLNYKCECPTHYTM--VNGT 171
+ +YH RQ N C N C +C L+ GGL Y+C+C + +
Sbjct: 643 TPFGVTVYHALRQPNATNPCGNNNGGCAQICVLSHRTDNGGLGYRCKCEFGFELDADEHH 702
Query: 172 CMAPSSFLIYAQRNIL 187
C+A +FL+++ + +
Sbjct: 703 CVAVKNFLLFSSQTAV 718
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 113/250 (45%), Gaps = 15/250 (6%)
Query: 1 MLWSDWGAGNG--GTIERSALDGTQRSVLL--HKVKANSLTVNYDEKRVYYVNLLSSSIE 56
+ WSD G +G I + +DGT +L + +T++ E+++Y+ IE
Sbjct: 1886 LYWSDHGTDSGVPAKIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRGVIE 1945
Query: 57 SIDIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
+++G ++ +V ++ P L ++ S ++YS+ IE+ DK+S + V++R +
Sbjct: 1946 RGNVDGTERMILVHHLA-HPWGLVVHGSFLYYSDEQYEVIERVDKSSGSNKVVFRDNIPY 2004
Query: 117 INDMLIYHPSRQT-GWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV--NGTCM 173
+ + +YH N C+ N C +CL P GG+ + C C + + + +C
Sbjct: 2005 LRGLRVYHHRNAADSSNGCSNNPNACQQICLPVP---GGM-FSCACASGFKLSPDGRSCS 2060
Query: 174 APSSFLIYAQRNILSRLITDPTQCPDSPYEIPNV-KNIKALDYDPVARQIYWIDSKLQAI 232
+SF++ + + + + ++ + +N+ D D IYW D +
Sbjct: 2061 PYNSFIVVSMLPAVRGFSLELSDHSEAMVPVAGQGRNVLHADVDVANGFIYWCD--FSSS 2118
Query: 233 KRASENATRI 242
R+S RI
Sbjct: 2119 VRSSNGIRRI 2128
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 21/247 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D+G IERS LD T R+VL+ + V L V++D +Y+V+ I I
Sbjct: 2205 LFWADYG--QKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHDTGYIYWVDDSLDIIARI 2262
Query: 59 DIEG-RNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRS--VIYRSSEK 115
+G +++ + P +T++ I + + + R + + K + R S
Sbjct: 2263 HRDGGESQVVRYGSRYPTPYGITVFGESIIWVDRNLRKVFQASKQPGNTDPPTVIRDSIN 2322
Query: 116 EINDMLIYHPSRQT------GWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVN 169
+ D+ I+ Q N C +N C + C A P KC C +
Sbjct: 2323 LLRDVTIFDEHVQPLSPAELNNNPCLQSNGGCSHFCFALPEL---PTPKCGCAFGTLEDD 2379
Query: 170 GTCMAPS--SFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIK-ALDYDPVARQIYWID 226
G A S FLIY+ N L L DP Q + P++ +V+ + ALDYD +I++
Sbjct: 2380 GKNCATSREDFLIYSLNNSLRSLHFDP-QDHNLPFQAISVEGMAIALDYDRRNNRIFFT- 2437
Query: 227 SKLQAIK 233
KL I+
Sbjct: 2438 QKLNPIR 2444
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
M SDW I R+ DG+ +++ N L +++ R+Y+V+ IE
Sbjct: 839 MFLSDWF--RPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSTSRLYWVDAFFDKIEHS 896
Query: 59 DIEG--RNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
+++G R ++ V + P LT++K +F ++W +I + K+ + R
Sbjct: 897 NLDGLDRKRLGHVDQMT-HPFGLTVFKDNVFLTDWRLGAIIRVRKSDGGDMTVVRRGISS 955
Query: 117 INDMLIYHPSRQTGWNKCAVA---NNECDYLCLATPGRGGGLNYKCECP 162
I + Y QTG N C+ N +C + C P C CP
Sbjct: 956 IMHVKAYDADLQTGTNYCSQTTHPNGDCSHFCFPVP----NFQRVCGCP 1000
Score = 38.1 bits (87), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 178 FLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASE 237
+L+++ R + L D T + + N+ ALD+D V ++YWID++ Q I+R
Sbjct: 3202 YLVFSNRYYIRNLTIDGTS---YSLILQGLGNVVALDFDRVEERLYWIDAEKQIIERMFL 3258
Query: 238 NAT 240
N T
Sbjct: 3259 NKT 3261
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 14 IERSALDGT-QRSVLLHKVK-ANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
IER L+ T Q +++ H+++ A SL V++ +++Y+++ + + D+EGR + + +
Sbjct: 3253 IERMFLNKTNQETIISHRLRRAESLAVDWVSRKLYWLDAILDCLFVSDLEGRQRKMLAQH 3312
Query: 72 IED----------KPVTLTLYKSEIFYSNW-DKRSIEKYDKTSHTRSVI 109
D + + L + +++++W D I + ++VI
Sbjct: 3313 CVDANNTFCFENPRGIVLHPQRGYVYWADWGDHAYIARIGMDGTNKTVI 3361
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLH-KVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG I R +DGT +SV++ K++ N++T++Y +Y+ + IE
Sbjct: 3337 VYWADWGVH--AYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFS 3394
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D+EG ++ T+ P LT+++ +F+++W+ R++EK +K + V+ ++ +
Sbjct: 3395 DLEGHHRHTVYDGSLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPF 3454
Query: 119 DMLIYHPSRQTGW-NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV 168
D+ +YHP RQ N C N C +LCL + GG + C CP + V
Sbjct: 3455 DIHVYHPYRQPIMSNPCGTNNGGCSHLCLI---KAGGRGFTCACPDDFQTV 3502
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 131/251 (52%), Gaps = 17/251 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M WSDWG + IER+++DGT R+V++ + L+++Y + +Y+++ IE
Sbjct: 1569 MFWSDWG--HHPRIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFC 1626
Query: 59 DIEGRNKITIVAN--IEDKPVTLTLYKSEIFYSNWDKRSIEKYDK-TSHTRSVIYRSSEK 115
D +G N+ ++A+ + P LTL++ +++++ R + + +K +SV+ S +
Sbjct: 1627 DYDGHNRRQVIASDLVLHHPHALTLFEDFVYWTDRGTRQVMQANKWHGGNQSVVMYSVHQ 1686
Query: 116 EINDMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGT--C 172
+ I HPSRQ N CA A+ C +LCL + +Y C CP+ + + + + C
Sbjct: 1687 PLGITAI-HPSRQPPSRNPCASAS--CSHLCLLSA--QAPRHYSCACPSGWNLSDDSVNC 1741
Query: 173 M-APSSFLIYAQRNILSRLITDP-TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQ 230
+ FL+ + NI+ + DP + D+ I +++ +++D + IYW+++ +
Sbjct: 1742 VRGDQPFLMSVRDNIIFGISLDPEVKSNDAMVPISGIQHGYDVEFDDSEQFIYWVENPGE 1801
Query: 231 AIKRASENATR 241
+ ++ + R
Sbjct: 1802 IHRVKTDGSNR 1812
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 1 MLWSDWGAGNGG-TIERSALDGTQRSVLLH-KVK-ANSLTVNYDEKRVYYVNLLSSSIES 57
+ +SDWG+ +G +ER+ +DG+ R L+ KV +T++ KRVY+V+ IE+
Sbjct: 523 LFFSDWGSLSGQPKVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYWVDSRYDYIET 582
Query: 58 IDIEGRNKITIV--ANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEK 115
+ +G + T+ ++ P ++L++ +F+++W K ++ K K + T +Y S
Sbjct: 583 VTYDGIQRKTVARGGSLVPHPFGISLFEEHVFFTDWTKMAVMKASKFTETNPQVYHQSSL 642
Query: 116 EINDMLIYHPSRQ-TGWNKCAVANNECDYLC-LATPGRGGGLNYKCECPTHYTMVNGT-- 171
+ + +YH RQ N C N C +C L+ GGL Y+C+C + + +
Sbjct: 643 RPHGVTVYHALRQPNATNPCGSNNGGCAQVCVLSHRTDNGGLGYRCKCEFGFELDDDEHR 702
Query: 172 CMAPSSFLIYAQRNIL 187
C+A +FL+++ + +
Sbjct: 703 CVAVKNFLLFSSKTAV 718
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 15/250 (6%)
Query: 1 MLWSDWGAGNG--GTIERSALDGTQRSVLL--HKVKANSLTVNYDEKRVYYVNLLSSSIE 56
+ WSD G +G I + +DGT +L + +T++ E+++Y+ IE
Sbjct: 1886 LYWSDHGTDSGVPAKIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAVTSRGVIE 1945
Query: 57 SIDIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
+++G ++ +V ++ P L +Y S ++YS+ IE+ DK+S V+ R +
Sbjct: 1946 RGNVDGTERMILVHHLA-HPWGLVVYGSFLYYSDEQYEVIERVDKSSGNNKVVLRDNVPY 2004
Query: 117 INDMLIYHPSRQT-GWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV--NGTCM 173
+ + +YH N C+ N C +CL P GG+ + C C + + + +C
Sbjct: 2005 LRGLRVYHRRNAADSSNGCSNNPNACQQICLPVP---GGM-FSCACASGFKLSPDGRSCS 2060
Query: 174 APSSFLIYAQRNILSRLITDPTQCPDSPYEIPNV-KNIKALDYDPVARQIYWIDSKLQAI 232
+SF++ + + + + ++ + +N+ D D IYW D +
Sbjct: 2061 PYNSFMVVSMLPAVRGFSLELSDHSEAMVPVAGQGRNVLHADVDVANGFIYWCD--FSSS 2118
Query: 233 KRASENATRI 242
R+S RI
Sbjct: 2119 VRSSNGIRRI 2128
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 27/250 (10%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D+G IERS LD T R+VL+ + V L +++D +Y+V+ I I
Sbjct: 2205 LFWADYG--QKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLIARI 2262
Query: 59 DIEG-RNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRS-----VIYRS 112
++G +++ + P +T++ I W R+++K + S V+ R
Sbjct: 2263 HLDGGESQVVRYGSRYPTPYGITVFGESII---WVDRNLKKVFQASKQPGNTDPPVVIRD 2319
Query: 113 SEKEINDMLIYHPSRQT------GWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYT 166
+ D+ I+ Q N C +N C + C A P +C C
Sbjct: 2320 KINLLRDVTIFDEHAQPLSPAELNNNPCLQSNGGCSHFCFALPEL---PTPRCGCAFGTL 2376
Query: 167 MVNGTCMAPSS--FLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIK-ALDYDPVARQIY 223
+G A S FLIY+ N L L DP P+++ +V ALDYD +I+
Sbjct: 2377 GNDGKSCATSQEDFLIYSLNNSLRSLHFDPRD-HSLPFQVISVAGTAIALDYDRRNNRIF 2435
Query: 224 WIDSKLQAIK 233
+ KL +++
Sbjct: 2436 FT-QKLNSLR 2444
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
M SDW I R+ DG+ +++ N L +++ R+Y+V+ IE
Sbjct: 839 MFLSDWF--RPAKIMRAWSDGSHLMPIVNTSLGWPNGLAIDWSASRLYWVDAFFDKIEHS 896
Query: 59 DIEG--RNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
++G R ++ V + P LT++K +F ++W +I + K+ + R
Sbjct: 897 TLDGLDRKRLGHVDQMT-HPFGLTVFKDNVFITDWRLGAIIRVRKSDGGDMTVIRRGISS 955
Query: 117 INDMLIYHPSRQTGWNKCAV---ANNECDYLCLATPGRGGGLNYKCECP 162
+ + Y QTG N C+ AN +C + C P C CP
Sbjct: 956 VMHVKAYDADLQTGSNYCSQTTHANGDCSHFCFPVP----NFQRVCGCP 1000
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 178 FLIYAQRNILSRLITDPTQCPDSPYEI--PNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
+LI++ R + L TD S Y + + N+ ALD+D V +++YWID++ Q I+R
Sbjct: 3202 YLIFSNRYYIRNLTTD-----GSSYSLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERM 3256
Query: 236 SENAT 240
N T
Sbjct: 3257 FLNKT 3261
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 14 IERSALDGTQRSVLL-HKVK-ANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
IER L+ T R ++ H+++ A SL V++ +++Y+++ + + D+EGR++ I +
Sbjct: 3253 IERMFLNKTNRETIINHRLRRAESLAVDWVSRKLYWLDAILDCLFVSDLEGRHRKMIAQH 3312
Query: 72 IED----------KPVTLTLYKSEIFYSNW 91
D + + L + +++++W
Sbjct: 3313 CVDANNTFCFEHPRGIVLHPQRGHVYWADW 3342
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens
GN=LRP2 PE=1 SV=3
Length = 4655
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLH-KVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DWG + I R +DGT +SV++ K++ N +T++Y +Y+ + IE
Sbjct: 3335 LYWADWG--HRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYS 3392
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D+EG ++ T+ P +T+++ I++++W+ R++EK +K + ++
Sbjct: 3393 DLEGHHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPF 3452
Query: 119 DMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHY 165
D+ +YHP RQ N C N C +LCL P GG + CECP +
Sbjct: 3453 DIHVYHPYRQPIVSNPCGTNNGGCSHLCLIKP---GGKGFTCECPDDF 3497
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 132/286 (46%), Gaps = 55/286 (19%)
Query: 1 MLWSDWGAGNG-GTIERSALDGTQRSVLLHKVKAN---SLTVNYDEKRVYYVNLLSSSIE 56
+ +SDW + +G +ER+ +DG+ R L+ K K +T++ KRVY+V+ IE
Sbjct: 524 LFFSDWESLSGEPKLERAFMDGSNRKDLV-KTKLGWPAGVTLDMISKRVYWVDSRFDYIE 582
Query: 57 SIDIEGRNKITIV--ANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSE 114
++ +G + T+V ++ P ++L++ ++F+++W K ++ K +K + T +Y +
Sbjct: 583 TVTYDGIQRKTVVHGGSLIPHPFGVSLFEGQVFFTDWTKMAVLKANKFTETNPQVYYQAS 642
Query: 115 KEINDMLIYHPSRQT-GWNKCAVANNECDYLC-LATPGRGGGLNYKCECPTHYTMVNGT- 171
+ +YH RQ N C N C+ +C L+ GL ++C+C + +
Sbjct: 643 LRPYGVTVYHSLRQPYATNPCKDNNGGCEQVCVLSHRTDNDGLGFRCKCTFGFQLDTDER 702
Query: 172 -CMAPSSFLIYA--------------QRNILSRLITDPTQCPDSPYEIPN---------- 206
C+A +FLI++ Q +++ + +P+ ++ +
Sbjct: 703 HCIAVQNFLIFSSQVAIRGIPFTLSTQEDVMVPVSGNPSFFVGIDFDAQDSTIFFSDMSK 762
Query: 207 --------------------VKNIKALDYDPVARQIYWIDSKLQAI 232
V+N+++L +D +++ +YW DS ++I
Sbjct: 763 HMIFKQKIDGTGREILAANRVENVESLAFDWISKNLYWTDSHYKSI 808
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 129/252 (51%), Gaps = 19/252 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ WSDWG + IER+++DG+ R+V++ LT++Y + +Y+++ ++
Sbjct: 1568 LFWSDWG--HHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFC 1625
Query: 59 DIEGRNKITIVAN--IEDKPVTLTLYKSEIFYSNWDKRSIEKYDK-TSHTRSVIYRSSEK 115
D G ++ ++A+ I P LTL++ +++++ R + + +K +SV+ + +
Sbjct: 1626 DYNGHHRRQVIASDLIIRHPYALTLFEDSVYWTDRATRRVMRANKWHGGNQSVVMYNIQW 1685
Query: 116 EINDMLIYHPSRQ-TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TC 172
+ ++ HPS+Q N CA + C +LCL + G Y C CP+ +++ C
Sbjct: 1686 PLG-IVAVHPSKQPNSVNPCAFS--RCSHLCLLS--SQGPHFYSCVCPSGWSLSPDLLNC 1740
Query: 173 MAPSS-FLIYAQRNILSRLITDP-TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDS--K 228
+ FLI +++I+ + +P + D+ I ++N +++D + IYW+++ +
Sbjct: 1741 LRDDQPFLITVRQHIIFGISLNPEVKSNDAMVPIAGIQNGLDVEFDDAEQYIYWVENPGE 1800
Query: 229 LQAIKRASENAT 240
+ +K N T
Sbjct: 1801 IHRVKTDGTNRT 1812
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 20/250 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D+G IERS LD T R+VL+ + V L V+ + VY+V+ I I
Sbjct: 2204 LFWADYG--QRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDIIARI 2261
Query: 59 DIEGRNKITI-VANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRS--VIYRSSEK 115
I G N I + P +T++++ I + + + + I + K + R +
Sbjct: 2262 RINGENSEVIRYGSRYPTPYGITVFENSIIWVDRNLKKIFQASKEPENTEPPTVIRDNIN 2321
Query: 116 EINDMLIYHPSRQ------TGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVN 169
+ D+ I+ Q N C N C +LC A PG KC+C +
Sbjct: 2322 WLRDVTIFDKQVQPRSPAEVNNNPCLENNGGCSHLCFALPGLH---TPKCDCAFGTLQSD 2378
Query: 170 GTCMAPSS--FLIYAQRNILSRLITDPTQCPDSPYEIPNV-KNIKALDYDPVARQIYWID 226
G A S+ FLI+A N L L DP P++ NV + + +LDYD V+ +IY+
Sbjct: 2379 GKNCAISTENFLIFALSNSLRSLHLDPEN-HSPPFQTINVERTVMSLDYDSVSDRIYFTQ 2437
Query: 227 SKLQAIKRAS 236
+ + + S
Sbjct: 2438 NLASGVGQIS 2447
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 113/249 (45%), Gaps = 16/249 (6%)
Query: 1 MLWSDWGAGNG--GTIERSALDGTQRSVLL--HKVKANSLTVNYDEKRVYYVNLLSSSIE 56
+ WSD G +G I + +DGT L + +T++ +E+++Y+ IE
Sbjct: 1885 LYWSDQGTDSGVPAKIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGRGVIE 1944
Query: 57 SIDIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
+++G +++ +V + P + ++ S ++Y++ IE+ DK + ++ R +
Sbjct: 1945 RGNVDGTDRMILVHQLS-HPWGIAVHDSFLYYTDEQYEVIERVDKATGANKIVLRDNVPN 2003
Query: 117 INDMLIYHPSRQT-GWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCM 173
+ + +YH N C+ N C +CL P GGL + C C T + + N +C
Sbjct: 2004 LRGLQVYHRRNAAESSNGCSNNMNACQQICLPVP---GGL-FSCACATGFKLNPDNRSCS 2059
Query: 174 APSSFLIYAQRNILSRLITDPTQCPDSPYEIPNV-KNIKALDYDPVARQIYWIDSKLQAI 232
+SF++ + + + + + ++ + +N +D D + IYW D
Sbjct: 2060 PYNSFIVVSMLSAIRGFSLELSDHSETMVPVAGQGRNALHVDVDVSSGFIYWCDFSSSV- 2118
Query: 233 KRASENATR 241
AS+NA R
Sbjct: 2119 --ASDNAIR 2125
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 26/224 (11%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DW IER+ L G R +++ V + LT++Y+E +Y+V+ IE
Sbjct: 2521 LYWADWDTH--AKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERS 2578
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSI---EKYDKTSHTRSVIYRSSEK 115
+ G ++ IV N LTLY I++++ + I KYD + S+
Sbjct: 2579 TLTGVDREVIV-NAAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQP 2637
Query: 116 EINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECP-----------TH 164
+ ++ + +Q N C N C ++C PG G +C+CP H
Sbjct: 2638 RGINTVVKNQKQQCN-NPCEQFNGGCSHIC--APGPNGA---ECQCPHEGNWYLANNRKH 2691
Query: 165 YTMVNGTCMAPSSFLIYAQRNILSRLITD-PTQCPDSPYEIPNV 207
+ NG SSF R I D C D E+ +V
Sbjct: 2692 CIVDNGERCGASSFTCSNGRCISEEWKCDNDNDCGDGSDEMESV 2735
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 14/169 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ ++DW I R+ DG+ +++ N L +++ R+Y+V+ IE
Sbjct: 840 LFFTDWF--RPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIEHS 897
Query: 59 DIEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
+G ++ + +IE P L ++ +F+++W +I + K + RS
Sbjct: 898 TFDGLDRRRL-GHIEQMTHPFGLAIFGEHLFFTDWRLGAIIRVRKADGGEMTVIRSGIAY 956
Query: 117 INDMLIYHPSRQTGWNKC---AVANNECDYLCLATPGRGGGLNYKCECP 162
I + Y + QTG N C N +C + C P C CP
Sbjct: 957 ILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVP----NFQRVCGCP 1001
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 156 NYKCEC-PTHYTMVNG-TCMAPSS---FLIYAQRNILSRLITDPTQCPDSPYEIPNVKNI 210
+Y C+C P + +G TC S+ +LI++ R L L D + + N+
Sbjct: 3173 SYICKCAPGYLREPDGKTCRQNSNIEPYLIFSNRYYLRNLTIDGYF---YSLILEGLDNV 3229
Query: 211 KALDYDPVARQIYWIDSKLQAIKRASENAT 240
ALD+D V +++YWID++ Q I+R N T
Sbjct: 3230 VALDFDRVEKRLYWIDTQRQVIERMFLNKT 3259
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 33 ANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWD 92
A+ + ++ +R+YY + L+ I S+ +G N+ I + + + L + +++++WD
Sbjct: 2468 ADGIAFDWITRRIYYSDYLNQMINSMAEDGSNRTVIARVPKPRAIVLDPCQGYLYWADWD 2527
Query: 93 KRS-IEKYDKTSHTRSVIYRSS 113
+ IE+ + R I SS
Sbjct: 2528 THAKIERATLGGNFRVPIVNSS 2549
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 156 NYKCECPTHYTMVNG--TCMAPSS----FLIYAQRNILSRLITDPTQCPDSPYEIPNVKN 209
+++C C T Y + + TC +S L+ +Q I++ +T +Q + + N
Sbjct: 1410 SFRCSCDTGYMLESDGRTCKVTASESLLLLVASQNKIIADSVT--SQVHNIYSLVENGSY 1467
Query: 210 IKALDYDPVARQIYWIDSKLQAIKRASENAT 240
I A+D+D ++ +I+W D+ A +N T
Sbjct: 1468 IVAVDFDSISGRIFWSDATQGKTWSAFQNGT 1498
>sp|Q04833|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis
elegans GN=lrp-1 PE=1 SV=1
Length = 4753
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 14 IERSALDGTQRSVLL--HKVKANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVA- 70
+E +A+DGT R L+ H + + + V+ KRVY+V+ +ESID +G ++ +
Sbjct: 536 LEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESIDYQGNDRRIVAQG 595
Query: 71 -NIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDMLI--YHPSR 127
N+ P L L+ +++++W + + + +K +++ ++E + M I YHP
Sbjct: 596 MNVVPHPFGLALFDQYLYWTDWTRLGVIQVEKFGSDTKLLWSNTENNVFPMGISAYHPMA 655
Query: 128 Q--TGWNKC-------AVANNECDYLCLATPGRGG-GLNYKCECPTHYTMVNGT-CMAPS 176
Q G ++C N +C+ +C+ + GG G+ YKC CP +VNG C+
Sbjct: 656 QPGPGQSECLAMKIENPCTNADCEGMCILSKDNGGFGVGYKCACPIGQKLVNGKRCIDSI 715
Query: 177 SFLIYAQRNILSRLI 191
+L+++ I+ +
Sbjct: 716 DYLLFSSNKIVRGIF 730
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 14 IERSALDGTQR------SVLLHKVK-ANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKI 66
I R ALDG+ + H + N++ ++Y R+++ + + I +D +G +
Sbjct: 3458 IGRIALDGSPELQDPIFKLAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGFMDFDGNGRR 3517
Query: 67 TIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDMLIYHPS 126
I A ++ ++ +++++W+ R + + DK + I + + + ND+ I HP
Sbjct: 3518 HIPAQRTSHVSSMVVFDDYLYWADWNLREVLRCDKWTGKNETILKKTVQLPNDLRIVHPM 3577
Query: 127 RQTGW-NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVN 169
RQ + N C N C +LCL GG Y C CP + +++
Sbjct: 3578 RQPAYPNPCGDNNGGCSHLCLIG---AGGNGYTCSCPDQFVLLS 3618
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVK---ANSLTVNYDEKRVYYVNLLSSSIES 57
M W+DWG IER+++DGT R +++ K K N++ ++Y RVY+ + I+
Sbjct: 1613 MFWTDWG--QNPCIERASMDGTDRQIIV-KTKIYWPNTIALDYTTDRVYFADSKLDFIDF 1669
Query: 58 IDIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRS-SE 114
++ +G + ++A+ + P L +++ ++YS+ + ++ Y K + + Y S +
Sbjct: 1670 VNYDGSGRTQVLASSKFVQHPHALAIFEDMMYYSDRRLQKLQVYPKYPNGTTSEYPSHTF 1729
Query: 115 KEINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECP 162
+ ++ HP Q + N C +LCL + C+CP
Sbjct: 1730 SKALGVVAVHPVLQPVIKNNPCSTNPCSHLCLLNNKN----TFTCKCP 1773
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 12/231 (5%)
Query: 1 MLWSDWGAGNG-GTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIES 57
+ W D G G + R+ LDG+ V+ + + + ++ RVY+ + I S
Sbjct: 1945 VFWLDRGGGAADAKVARAGLDGSNPLVIASNDLAELDHIAIDTTNTRVYFSEAKAGRISS 2004
Query: 58 IDIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEI 117
+ +G+++ ++++ +P L Y +FY++ SIE ++ + +K++
Sbjct: 2005 VTYDGQDRHYVLSDGGRQPNGLAFYGDRLFYADSAFDSIEVATINGDSQPPQWTHFKKDV 2064
Query: 118 NDML---IYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNGTC-- 172
++ P + + C + N CD++C+ C C Y T
Sbjct: 2065 ENLANIKALQPRASSSGHPCHINNGNCDHICIPLM----FAQRTCTCANGYVKDGQTSCK 2120
Query: 173 MAPSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIY 223
+ SF+I A + + D TQ E +I +DYD ++ IY
Sbjct: 2121 LFDESFVIVATKTKVIGYPIDETQSKGVAMEPIGGLSITGVDYDYESKTIY 2171
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 21/239 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D G TI+RS LDG++R V++ + L V+ K +Y+ + I +
Sbjct: 2262 LYWAD--QGQKPTIQRSFLDGSRREVIVSSGIAEPTDLVVDVASKMIYWSDAKMDGIYRV 2319
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSN--WDK--RSIEKYDKTSHTRS-VIYRSS 113
G + ++I + L+ +++++ +K R+ K ++TS S +S
Sbjct: 2320 RSTGGTPELVRSDIA-SAAGVALHGQNMYWTDNRLEKLFRATSKPNQTSLLLSPTTVAAS 2378
Query: 114 EKEINDMLIYHPSRQT-GWNKCAVANN----ECDYLCLATPGRGGGLNYKCECPTHYTMV 168
K+I D+ ++ + Q + C + +N C LC ATPG C C +
Sbjct: 2379 LKDIGDVAVFSSNNQPRASSPCQITDNLRKSPCTQLCFATPGT---QTPTCSC-ARGVLK 2434
Query: 169 NGTCMAPSSFLIYAQRNILSRLITDPTQCPDSPYE--IPNVKNIKALDYDPVARQIYWI 225
TC P ++++++ + + + +P P + P + N++ D D R++Y++
Sbjct: 2435 GRTCEEPDTYIMFSDGDKIIDVAIEPDVKASRPLKDPFPEISNLQTFDVDVNLRRVYFV 2493
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 8 AGNGGTIERSALDGTQRSVLLHKVKANSLTVNYDE---KRVYYVNLLSSSIESIDIEGRN 64
AG IE + +DGT R +++ + + ++ DE R+Y+V+ +++++I+G
Sbjct: 4350 AGLHAKIECADMDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYRRVDAVNIDGSE 4409
Query: 65 KITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDMLI-- 122
+ T+V + P + ++++ I++ + + +++ DK R + S ++ + + +
Sbjct: 4410 RTTVVHD-RHIPYAVDVFENHIYWLSRESKTLYVQDKFGRGRVSVLASDLEDGHTVRVSQ 4468
Query: 123 -YHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYT-MVNGTC 172
Y Q + C A +C +LC++ P G + C CP ++G+C
Sbjct: 4469 KYAKDTQRTVSGCERA--QCSHLCVSLPSTG----FACLCPDGIVPQLDGSC 4514
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 12 GTIERSALDGTQRSVLLHKV--KANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIV 69
I R +DG V+ + + + + +++ E R+ + + L +I +D +G+N + +
Sbjct: 870 AAIYRCHIDGQNCQVIRNTTLGRPSEMAIDFAENRLCWGDTLLKTISCMDFDGKNVVKL- 928
Query: 70 ANIEDK-PVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRS---------------- 112
+I++ PV +T+ I+Y + SI + K + S I R
Sbjct: 929 -DIDNPIPVAITIMNEYIYYVHQRPYSIRRVHKKNGGGSKIVREFGADERSIFSLKACSH 987
Query: 113 SEKEINDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRG--GGLNYKCECPTHYTMVN 169
+ I D HP R + +C LC ATP L KC C + M+N
Sbjct: 988 QNQPIPDDSREHPCRAS----------QCTQLCFATPSESHPNELEAKCACRQGF-MIN 1035
Score = 38.1 bits (87), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 97/259 (37%), Gaps = 48/259 (18%)
Query: 1 MLWSDWGAGNGGT-----IERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSS 53
+ WSD G G IERS L G R V++ + + ++ V++ +++Y+ ++
Sbjct: 2584 LFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFRNQKIYWADVNRL 2643
Query: 54 SIESIDIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHT--RSVIYR 111
+IE D +G+N+ I + K +L ++ ++ S+ + + DK S + +V+
Sbjct: 2644 NIEVADYDGQNRKVIASGYRAK--SLDIWDRWLYMSDPLSNGVFRIDKESGSGLENVV-- 2699
Query: 112 SSEKEINDMLIYHPSRQTGWNK-----------CAVANNECDYLCLATPGRGG--GLNYK 158
S++ I L S + C N CD LC G +
Sbjct: 2700 -SDRRIPGALRVFASESDVRTRNQVCNALTSQLCKTDNGGCDQLCTVVADDIGLAASKVQ 2758
Query: 159 CECPTHYTMVN--------------------GTCMAPSSFLIYAQRNILSRLITDPT-QC 197
C C Y +V C+ P +F IL D C
Sbjct: 2759 CSCNDTYELVQEPGKDYPTQCVLRGSNSEPAKECLPPYNFQCGDGSCILLGATCDSKPDC 2818
Query: 198 PDSPYEIPNVKNIKALDYD 216
D+ E PN N ++ D
Sbjct: 2819 ADASDENPNYCNTRSCPED 2837
>sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gallus gallus GN=SORL1 PE=2
SV=1
Length = 1592
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKANSLTVNYDEKRVYYVNLLSSSIESIDI 60
M W+DWG G I RS +DG+ + ++ + ++ D+ +Y+ IE +D
Sbjct: 797 MFWTDWGDSRPG-IYRSDMDGSLAACIVSEGVRWPNGISVDDHWIYWTEAYMDRIERVDF 855
Query: 61 EGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDM 120
G + I+ ++ P + ++K+EI++++W + SI + K S +R I DM
Sbjct: 856 NGLQRSVILDSLP-HPYAIAVFKNEIYWNDWSQLSIFRASKNSGSRMETLVGRLYGIMDM 914
Query: 121 LIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGL--------------NYKCECPTHYT 166
I++ + TG N C + C LCL G KC+CP Y+
Sbjct: 915 KIFYRGKTTGQNACIA--HPCSLLCLPKSNNGRSCKCPEGVSSTVLPSGEVKCDCPHGYS 972
Query: 167 MVNGTCM 173
M N TC+
Sbjct: 973 MKNNTCV 979
>sp|Q92673|SORL_HUMAN Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2
Length = 2214
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKANSLTVNYDEKRVYYVNLLSSSIESIDI 60
M W+DWG G I RS +DG+ L+ + ++ D++ +Y+ + IE I
Sbjct: 890 MFWTDWGDLKPG-IYRSNMDGSAAYHLVSEDVKWPNGISVDDQWIYWTDAYLECIERITF 948
Query: 61 EGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDM 120
G+ + I+ N+ P + ++K+EI++ +W + SI + K S ++ I + + DM
Sbjct: 949 SGQQRSVILDNLP-HPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILANQLTGLMDM 1007
Query: 121 LIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGL--------------NYKCECPTHYT 166
I++ + TG N C C LCL + C+CP Y
Sbjct: 1008 KIFYKGKNTGSNAC--VPRPCSLLCLPKANNSRSCRCPEDVSSSVLPSGDLMCDCPQGYQ 1065
Query: 167 MVNGTCM 173
+ N TC+
Sbjct: 1066 LKNNTCV 1072
>sp|Q95209|SORL_RABIT Sortilin-related receptor OS=Oryctolagus cuniculus GN=SORL1 PE=2 SV=1
Length = 2213
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKANSLTVNYDEKRVYYVNLLSSSIESIDI 60
M W+DWG G I RS +DG+ L+ + ++ D++ +Y+ + IE I
Sbjct: 889 MFWTDWGDLKPG-IYRSNMDGSAAYRLVSEDVKWPNGISVDDQWIYWTDAYLDCIERITF 947
Query: 61 EGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDM 120
G+ + I+ + P + ++K+EI++ +W + SI + K S ++ I S + DM
Sbjct: 948 SGQQRSVILDRLP-HPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILASQLTGLMDM 1006
Query: 121 LIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGL--------------NYKCECPTHYT 166
I++ + TG N C C LCL + C+CP Y
Sbjct: 1007 KIFYKGKNTGSNAC--VPRPCSLLCLPRANNSKSCRCPDGVASSVLPSGDLMCDCPKGYE 1064
Query: 167 MVNGTCM 173
+ N TC+
Sbjct: 1065 LKNNTCV 1071
>sp|Q98931|LRP8_CHICK Low-density lipoprotein receptor-related protein 8 OS=Gallus gallus
GN=LRP8 PE=1 SV=1
Length = 917
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M WSDWG + IE++ L+G R VL+ N +T++ +R+Y+V+ S+ I
Sbjct: 568 MYWSDWG--DKAKIEKAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLHSLSCI 625
Query: 59 DIEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D G N+ ++++I+D P L +++ +F+++ + +I ++ S + +
Sbjct: 626 DFNGSNREVLISSIDDLSHPFGLAVFEDRVFWTDLENEAIFSANRLSGLDISVLAENLNN 685
Query: 117 INDMLIYHPSRQ-TGWNKCAVA---NNECDYLCLATPG-RGGGLNYKCECP 162
+D++++H +Q + C ++ N C+YLCL P + C CP
Sbjct: 686 PHDIVVFHELKQPKAPDSCELSPQPNGGCEYLCLPAPHISPRSPKFTCACP 736
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTM----VNGTCMAPSSFLIYAQRNILSRLITDP 194
+ C +C+ G +YKCEC Y M N + S +LI+ R+ + ++ D
Sbjct: 399 DACSQICINYKG-----DYKCECYEGYEMDTLSKNCKAVGKSPYLIFTNRHEVRKI--DL 451
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQA-----IKRASENATRI 242
+ D IP +KN+ ALD + +IYW D + I +AS+ A ++
Sbjct: 452 VK-RDYSRIIPMLKNVVALDVEVATNRIYWCDLFYRKIYSAYIDKASDTAEQV 503
>sp|Q14114|LRP8_HUMAN Low-density lipoprotein receptor-related protein 8 OS=Homo sapiens
GN=LRP8 PE=1 SV=4
Length = 963
Score = 69.7 bits (169), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 11/171 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M WSDWG + IE+S L+G R L+ N +T++ +R+Y+V+ + SI
Sbjct: 554 MYWSDWG--DQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSI 611
Query: 59 DIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D G N+ T++++ + P + +++ ++F+++ + +I ++ + I +
Sbjct: 612 DFSGGNRKTLISSTDFLSHPFGIAVFEDKVFWTDLENEAIFSANRLNGLEISILAENLNN 671
Query: 117 INDMLIYHPSRQT-GWNKCAVA---NNECDYLCLATPG-RGGGLNYKCECP 162
+D++I+H +Q + C ++ N C+YLCL P Y C CP
Sbjct: 672 PHDIVIFHELKQPRAPDACELSVQPNGGCEYLCLPAPQISSHSPKYTCACP 722
Score = 35.0 bits (79), Expect = 0.48, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 13/102 (12%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMAP---SSFLIYAQRNILSRLITD 193
+ C +C+ G +KCEC Y M + C A S LI+ R+ + R+ D
Sbjct: 384 DACSQICVNYKGY-----FKCECYPGYEMDLLTKNCKAAAGKSPSLIFTNRHEVRRI--D 436
Query: 194 PTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
+ S IP +KN+ ALD + +IYW D + I A
Sbjct: 437 LVKRNYSRL-IPMLKNVVALDVEVATNRIYWCDLSYRKIYSA 477
>sp|Q924X6|LRP8_MOUSE Low-density lipoprotein receptor-related protein 8 OS=Mus musculus
GN=Lrp8 PE=1 SV=2
Length = 996
Score = 68.9 bits (167), Expect = 3e-11, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M WSDWG IE++ L+G R L+ N +T++ +R+Y+V+ + SI
Sbjct: 587 MYWSDWGFQ--AKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSI 644
Query: 59 DIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D G N+ ++ + + P + +++ ++F+++ + +I ++ + I +
Sbjct: 645 DFNGGNRKMLIFSTDFLSHPFGVAVFEDKVFWTDLENEAIFSANRLNGLEIAILAENLNN 704
Query: 117 INDMLIYH----PSRQTGWNKCAVANNECDYLCLATPG-RGGGLNYKCECPTHYTMVNGT 171
+D++I+H P + A N C+YLCL P Y C CP TM G
Sbjct: 705 PHDIVIFHELKQPKAADACDLSAQPNGGCEYLCLPAPQISSHSPKYTCACPD--TMWLGP 762
Query: 172 CM-----APSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKN 209
M AP S + ++R + T+ P + P +N
Sbjct: 763 DMKRCYRAPQSTSTTTLASAMTRTVPATTRAPGTTIHDPTYQN 805
Score = 37.0 bits (84), Expect = 0.12, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMA---PSSFLIYAQRNILSRLITD 193
+ C +C+ G +KCEC Y M + C A S LI+ R+ + R+ D
Sbjct: 417 DACSQICVNYKGY-----FKCECHPGYEMDTLTKNCKAVAGKSPSLIFTNRHEVRRI--D 469
Query: 194 PTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASENATRI 242
+ D IP +KN+ ALD + +IYW D + I A + I
Sbjct: 470 LVK-RDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAHMDKASI 517
>sp|O88307|SORL_MOUSE Sortilin-related receptor OS=Mus musculus GN=Sorl1 PE=2 SV=3
Length = 2215
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKANSLTVNYDEKRVYYVNLLSSSIESIDI 60
M W+DWG G I RS +DG+ L+ + ++ D + +Y+ + IE I
Sbjct: 890 MFWTDWGDLKPG-IYRSYMDGSAAYRLVSEDVKWPNGISVDSQWIYWTDAYLDCIERITF 948
Query: 61 EGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDM 120
G+ + I+ ++ P + ++K+EI++ +W + SI + K S ++ I S + DM
Sbjct: 949 SGQQRSVILDSLP-HPYAIAVFKNEIYWDDWSQLSIFRASKHSRSQVEILASQLTGLMDM 1007
Query: 121 LIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGL--------------NYKCECPTHYT 166
+++ + G N C C LCL + C+CP Y
Sbjct: 1008 KVFYKGKNAGSNAC--VPQPCSLLCLPKANNSKSCRCPEGVASSVLPSGDLMCDCPQGYQ 1065
Query: 167 MVNGTCM 173
N TC+
Sbjct: 1066 RKNNTCV 1072
>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus norvegicus GN=Vldlr
PE=2 SV=1
Length = 873
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 3 WSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDI 60
WSDWG IE++ ++G R L+ + N +T++ + R+Y+++ + S+D+
Sbjct: 572 WSDWG--EPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDL 629
Query: 61 EGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
G+++ ++ ++E P+ LT+++ +++ + + ++ +K + + ++ +
Sbjct: 630 NGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQ 689
Query: 119 DMLIYHPSRQ-TGWNKCA--VANNECDYLCLATPG-RGGGLNYKCECPTHYTM-VNG-TC 172
D++IYH Q +G N C + N C+YLCL P Y C CP Y + NG C
Sbjct: 690 DIIIYHELVQPSGKNWCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLEENGREC 749
Query: 173 MAPSSFLIYAQ 183
+ S+ + Y++
Sbjct: 750 QSTSTPVTYSE 760
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMA----PSSFLIYAQRNILSRLITDP 194
C +C+ G YKCEC Y M G C A PS LI+ R + ++ +
Sbjct: 406 CSQICINLKG-----GYKCECSRGYQMDLATGVCKAVGKEPS--LIFTNRRDIRKIGLER 458
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRAS 236
+ + ++N ALD D A++++W D +AI AS
Sbjct: 459 KE---YIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSAS 497
>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus musculus GN=Vldlr PE=1
SV=1
Length = 873
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 3 WSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDI 60
WSDWG IE++ ++G R L+ + N +T++ + R+Y+++ + S+D+
Sbjct: 572 WSDWG--EPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDL 629
Query: 61 EGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
G+++ ++ ++E P+ LT+++ +++ + + ++ +K + + ++ +
Sbjct: 630 NGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQ 689
Query: 119 DMLIYHPSRQ-TGWNKCA--VANNECDYLCLATPG-RGGGLNYKCECPTHYTM-VNG-TC 172
D+++YH Q +G N C + N C+YLCL P Y C CP Y + NG C
Sbjct: 690 DIIVYHELVQPSGKNWCEDDMENGGCEYLCLPAPQINDHSPKYTCSCPNGYNLEENGREC 749
Query: 173 MAPSSFLIYAQ 183
+ S+ + Y++
Sbjct: 750 QSTSTPVTYSE 760
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMA----PSSFLIYAQRNILSRLITDP 194
C +C+ G YKCEC Y M G C A PS LI+ R + ++ +
Sbjct: 406 CSQICINLKG-----GYKCECSRGYQMDLATGVCKAVGKEPS--LIFTNRRDIRKIGLER 458
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRAS 236
+ + ++N ALD D A++++W D +AI AS
Sbjct: 459 KE---YIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSAS 497
>sp|Q00968|EGF_PIG Pro-epidermal growth factor OS=Sus scrofa GN=EGF PE=1 SV=2
Length = 1214
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D G IE S+L G R V+ V + +T++Y ++Y+ + S IE
Sbjct: 612 LFWTDMGTNP--RIESSSLQGIGRQVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMS 669
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G + + N P + +++ +++S+W S+ + +K + V R S + +
Sbjct: 670 NLDGSRRQRLAQNDVGHPFAVAVFEDHVWFSDWTMPSVIRVNKRTGKNRVRLRGSMLKPS 729
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPG 150
+++ HP + G N C N C+++C + G
Sbjct: 730 SLVVVHPLAKPGTNPCLHQNGGCEHICKESFG 761
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 161 CPTHYTMVNG--TCMAPSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPV 218
CP NG TC+ P+ FLI++ N + R+ + T + + + +D+
Sbjct: 28 CPEGSPSGNGNATCVGPAPFLIFSHGNSIFRIDLEGT---NHEQLVADAGISVLMDFHYN 84
Query: 219 ARQIYWIDSKLQAIKRASENATR 241
+IYW+D + Q ++R N TR
Sbjct: 85 EERIYWVDLERQLLQRVFLNGTR 107
Score = 37.7 bits (86), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 138 NNECDYLCLA-TPGRGGGLNYKCECPTHYTMV--NGTCMA--PSSFLIYAQRNILSRLIT 192
N C LCL +P + ++C C Y + +C A P FL++A + +
Sbjct: 444 NGGCSQLCLPLSP-----VTWECGCFPGYDLQLDKKSCRASGPPPFLLFANSQDIRHMHF 498
Query: 193 DPTQCPDSPYEI---PNVKNIKALDYDPVARQIYWIDSKLQAIKRASENATR 241
D T YE + + ALD+DPV ++Y+ + L+ I+RA+ + ++
Sbjct: 499 DGTD-----YETLLNQQIGMVLALDHDPVENKVYFAHTALKWIERANMDGSQ 545
Score = 35.0 bits (79), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA-NSLTVNYDEKRVYYVNL----LSSSI 55
M WS AG ++ R+ + G + +LL + +++++ +KR++++ SS I
Sbjct: 172 MFWSSVVAG---SLHRADVTGVEVRLLLETSEEIAAVSLDVLDKRLFWIQYNREGGSSRI 228
Query: 56 ESIDIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSI 96
S D +G + + ++L+ IFYS W K++I
Sbjct: 229 CSCDYDGGSVHFSKHLTQHNVFAMSLFGDHIFYSTWKKKTI 269
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 10 NGGTIERSALDGTQRSVLLHKVKANSLT-VNYDEKRVYYVNLLSSSIESIDIEGRNKITI 68
+G +I R L+GT L+ + L +Y+E+R+Y+V+L ++ + + G +
Sbjct: 52 HGNSIFRIDLEGTNHEQLVADAGISVLMDFHYNEERIYWVDLERQLLQRVFLNGTRQ-EK 110
Query: 69 VANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVI 109
V N+E + + E+ +SN + +I D + V+
Sbjct: 111 VCNLEKNVSGMAINWINEELIWSNQQEGTITVTDMKGNNSRVL 153
>sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familiaris GN=EGF PE=2 SV=1
Length = 1216
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D G IE S+L G R V+ V + +T++Y ++Y+ + S IE
Sbjct: 614 LFWTDMGINP--RIESSSLQGIGRLVIASSDLVWPSGITIDYVTDKLYWCDTKLSVIEMA 671
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G + + N P + +++ +++S+W SI + DK + V R S + +
Sbjct: 672 NLDGSKRQRLAQNDVGHPFAMAVFEDHVWFSDWTMPSIIRVDKRTGKNRVRLRGSMLKPS 731
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLC 145
+++ HP + G C N C+++C
Sbjct: 732 SLVVVHPLAKPGAQPCLYQNGGCEHIC 758
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 138 NNECDYLCLATPGRGGGLNYKCECPTHYTMV--NGTCMA--PSSFLIYAQRNILSRLITD 193
N C LCL ++++C C Y + +C A P FL++A + + D
Sbjct: 446 NGGCSQLCLPL----SPVSWECGCFPGYDLQLDKQSCAASGPQPFLLFANSQDIRHMHFD 501
Query: 194 PTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASENATR 241
T + + ALD+DPV +IY+ + L+ I+RA+ + ++
Sbjct: 502 GTD--YGTLLSQQMGMVFALDHDPVENKIYFAHTALKWIERANMDGSQ 547
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 14 IERSALDGTQRSVLLHKV--KANSLTVNYDEKRVYYVNLLSSSIESIDIEGRNKITIVAN 71
IER+ +DG+QR L+ + L +++ +++ Y+ + S IE D+ G+++ I+
Sbjct: 538 IERANMDGSQRERLIEEGVDVPEGLAIDWIDRKFYWTDSGKSLIEGSDLNGKHREIIIKE 597
Query: 72 IEDKPVTLTLY 82
+P + ++
Sbjct: 598 DISQPRGIAVH 608
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 12 GTIERSALDGTQRSVLLHKV-KANSLTVNYDEKRVYYVNLL----SSSIESIDIEGRNKI 66
G++ R+ L+G + +LL + +++++ +K+++++ +S I S + +G +
Sbjct: 182 GSLHRADLNGVEEKILLQTSERITAVSLDVLDKQLFWIQYSRDGSNSHIYSCNYDGGSVH 241
Query: 67 TIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTS 103
+ ++L+ ++IFYS W K++I +K S
Sbjct: 242 LSKHLTQHNFFAMSLFGNQIFYSTWKKKTIWIANKHS 278
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 171 TCMAPSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQ 230
C+ P+ FLI++ + R+ + T + + + +D+ +IYW+D + Q
Sbjct: 40 ACVGPAPFLIFSHGISIFRIDLEGT---NHEQLVADAGVSVIMDFHYNKERIYWVDPERQ 96
Query: 231 AIKRASENATR 241
++R N TR
Sbjct: 97 LLQRVFLNGTR 107
>sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=Homo sapiens GN=VLDLR PE=1
SV=1
Length = 873
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 3 WSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESIDI 60
WSDWG IE++ ++G R L+ N +T++ + R+Y+++ + S+D+
Sbjct: 572 WSDWG--EPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDL 629
Query: 61 EGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
G+++ ++ ++E P+ LT+++ +++ + + ++ +K + + ++ +
Sbjct: 630 NGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQ 689
Query: 119 DMLIYHPSRQ-TGWNKCA--VANNECDYLCLATPG-RGGGLNYKCECPTHYTM-VNG-TC 172
D+++YH Q +G N C + N C+YLCL P Y C CP+ Y + NG C
Sbjct: 690 DIIVYHELVQPSGKNWCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPSGYNVEENGRDC 749
Query: 173 MAPSSFLIYAQ 183
+ ++ + Y++
Sbjct: 750 QSTATTVTYSE 760
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMA----PSSFLIYAQRNILSRLITDP 194
C +C+ G YKCEC Y M G C A PS LI+ R + ++ +
Sbjct: 406 CSQICINLKG-----GYKCECSRGYQMDLATGVCKAVGKEPS--LIFTNRRDIRKIGLER 458
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRAS 236
+ + ++N ALD D A++++W D +AI AS
Sbjct: 459 KE---YIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSAS 497
>sp|Q95ND4|EGF_FELCA Pro-epidermal growth factor OS=Felis catus GN=EGF PE=2 SV=1
Length = 1210
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D G IE S+L G R V+ V + +T++Y ++Y+ + S IE
Sbjct: 609 LFWTDMGINP--RIESSSLQGIGRRVIASSDLVWPSGITIDYLTDKLYWCDAKQSVIEMA 666
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G + + N P + +++ +++S+W S+ + +K + V R S + +
Sbjct: 667 NLDGSKRQRLAQNDVGHPFAIAVFEDHVWFSDWTMPSVIRVNKRTGKNRVRLRGSMLKPS 726
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLC 145
+++ HP + G + C N C+++C
Sbjct: 727 SLVVVHPLAKPGSDPCLHQNGGCEHIC 753
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 169 NGTCMAPSSFLIYAQRNILSRLITDPTQCPDSPYE--IPNVKNIKALDYDPVARQIYWID 226
N TC+ P FLI++ + R+ D T YE + + +D+ ++YW+D
Sbjct: 38 NSTCVGPEPFLIFSHGGSIFRIDLDGTN-----YEQLVADAGVSVIMDFHYYKERLYWVD 92
Query: 227 SKLQAIKRASENATR 241
+ Q ++R N TR
Sbjct: 93 LERQLLQRVFLNGTR 107
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 138 NNECDYLCLA-TPGRGGGLNYKCECPTHYTMV--NGTCMA--PSSFLIYAQRNILSRLIT 192
N C LCL +P ++++C C Y + +C A P FL++A + +
Sbjct: 441 NGGCSQLCLPLSP-----VSWECGCFPGYDLQLDKKSCAASGPQPFLLFANSQDIRHVRF 495
Query: 193 DPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASENATR 241
D T + + ALD+DPV +IY+ + L+ I+RA+ + ++
Sbjct: 496 DGTD--YGSLLSQQMGMVFALDHDPVENKIYFAHTALKWIERANMDGSQ 542
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/126 (18%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 10 NGGTIERSALDGTQRSVLLHKVKANSLTVNYD--EKRVYYVNLLSSSIESIDIEGRNKIT 67
N I DGT LL + +++D E ++Y+ + IE +++G +
Sbjct: 486 NSQDIRHVRFDGTDYGSLLSQQMGMVFALDHDPVENKIYFAHTALKWIERANMDGSQRER 545
Query: 68 IVANIEDKPVTLTL--YKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEINDMLIYHP 125
++ D P L + + ++++ K IE D R +I + + + ++
Sbjct: 546 LIEEAVDVPEGLAIDWIDRKFYWTDRGKALIEGSDLNGKHREIIIKEEVSQPRGIAVHPM 605
Query: 126 SRQTGW 131
+++ W
Sbjct: 606 AKRLFW 611
Score = 34.3 bits (77), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 6 WGAGNGGTIERSALDGTQRSVLLHKV-KANSLTVNYDEKRVYYV----NLLSSSIESIDI 60
W + G++ R+ L+G + +LL + +++++ +KR++++ + +S I S +
Sbjct: 174 WSSEVAGSLHRADLNGVEVKILLETSERITAVSLDVLDKRLFWIQNNRDGSNSYICSCNY 233
Query: 61 EGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSI 96
+G + + ++L+ IFYS W K++I
Sbjct: 234 DGGSVHFNKHLTQHSLFAMSLFGDRIFYSTWKKKTI 269
>sp|P07522|EGF_RAT Pro-epidermal growth factor OS=Rattus norvegicus GN=Egf PE=1 SV=2
Length = 1133
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D G IE S+L G+ R+++ ++ + + ++Y +Y+ + S IE
Sbjct: 614 LFWTD--TGMSPRIESSSLQGSDRTLIASSNLLEPSGIAIDYLTDTLYWCDTKLSVIEMA 671
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
D++G + + N P +L +++ +++S+W S+ + +K + V R S + +
Sbjct: 672 DLDGSKRRRLTQNDVGHPFSLAVFEDHVWFSDWAIPSVIRVNKRTGQNRVRLRGSMLKPS 731
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPG 150
+++ HP + G + C N C+++C + G
Sbjct: 732 SLVVVHPLAKPGADPCLHRNGGCEHICQESLG 763
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 138 NNECDYLCLATPGRGGGLNYKCECPTHYTMV--NGTC---MAPSSFLIYAQRNILSRLIT 192
N C +CL +++C+C Y + +C M P FL++A + +
Sbjct: 445 NGGCSQICLPL----SLASWECDCFPGYDLQLDRKSCAASMGPQPFLLFANSQDIRHMHF 500
Query: 193 DPTQCPDSPYEI---PNVKNIKALDYDPVARQIYWIDSKLQAIKRASENATR 241
D T Y+ + + ALDYDPV +IY+ + L+ I+RA+ + ++
Sbjct: 501 DGTD-----YKTLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANLDGSQ 547
>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=Oryctolagus cuniculus
GN=VLDLR PE=2 SV=1
Length = 873
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRS--VLLHKVKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ WSDWG IE++ ++G R V + N +T++ + R+Y+++ + S+
Sbjct: 570 VYWSDWG--EPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSV 627
Query: 59 DIEGRNKITIVANIE--DKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D+ G+++ ++ ++E P+ LT+++ +++ + + ++ +K + + ++ +
Sbjct: 628 DLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLND 687
Query: 117 INDMLIYHPSRQ-TGWNKCA--VANNECDYLCLATPG-RGGGLNYKCECPTHYTM-VNG- 170
D+++YH Q +G N C + N C+YLCL P Y C CP Y + NG
Sbjct: 688 AQDIIVYHELVQPSGKNWCEEDMENGGCEYLCLPAPQINEHSPKYTCSCPNGYHLEENGR 747
Query: 171 TCMAPSSFLIYAQRNILSRLITDPT 195
C + ++ + Y++ + PT
Sbjct: 748 ECQSTATTVTYSETKDTNTTEISPT 772
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMA----PSSFLIYAQRNILSRLITDP 194
C +C+ G YKCEC Y M G C A PS LI+ R + ++ +
Sbjct: 406 CSQICINLKG-----GYKCECSRGYQMDLATGVCKAVGKEPS--LIFTNRRDIRKIGLER 458
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRAS 236
+ + ++N ALD D A++++W D +AI AS
Sbjct: 459 KE---YIQLVEQLRNTVALDADIAAQKLFWADVSQKAIFSAS 497
>sp|P20063|LDLR_RABIT Low-density lipoprotein receptor (Fragment) OS=Oryctolagus
cuniculus GN=LDLR PE=2 SV=1
Length = 837
Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 16/225 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQ-RSVLLHKVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IE+ L+G S++ ++ N +T++ R+Y+V+ SI SI
Sbjct: 518 MYWTDWGVP--AKIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSI 575
Query: 59 DIEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D+ G N+ T++ + + P +L +++ ++F+++ +I ++ + + + +
Sbjct: 576 DVNGGNRKTVLEDEQRLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDVHLVAENLLS 635
Query: 117 INDMLIYH---PSRQTGW-NKCAVANNECDYLCLATPG-RGGGLNYKCECPTHYTMVNG- 170
D++++H R W K A+ N C YLCL P + C CP +
Sbjct: 636 PEDIVLFHNLTQPRGVNWCEKTALPNGGCQYLCLPAPQINSHSPKFTCACPDGTLLAADM 695
Query: 171 -TCMAPSSFLIYAQRNILS---RLITDPTQCPDSPYEIPNVKNIK 211
+C + ++ QR + +L P P P + ++
Sbjct: 696 RSCRTEADVILSTQRASTAARPQLTGSPAGTTQEPLTEPTLSTLE 740
Score = 38.5 bits (88), Expect = 0.043, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMAPSS--FLIYAQRNILSRLITDPTQ 196
C LC+ G +YKCEC + + + C A S +L + R+ + ++ D ++
Sbjct: 351 CSQLCVNLAG-----SYKCECRAGFQLDPHSQACKAVDSIAYLFFTNRHEVRKMTLDRSE 405
Query: 197 CPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
I N+KN+ ALD + + +IYW D + I A
Sbjct: 406 YTSL---IANLKNVVALDAEVASNRIYWSDLSQRKIYSA 441
>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus laevis GN=ldlr-a PE=2
SV=1
Length = 909
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IE+ L+G R L+ + N +T++ +R+Y+V+ S+ I
Sbjct: 529 MYWTDWGLP--AKIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLHSLSCI 586
Query: 59 DIEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D+ G N+ T++++ P LT+++ +F+++ + +I + T I + +E
Sbjct: 587 DVTGENRRTVISDETHLAHPFGLTIFEDLVFWTDIENEAI--FSANRLTGRNIMKVAEDL 644
Query: 117 IN--DMLIYHPSRQ-TGWNKCA---VANNECDYLCLATPG-RGGGLNYKCECP 162
++ D+++YH RQ N C + N C+YLCL P + C CP
Sbjct: 645 LSPEDIVLYHNLRQPKAENWCEAHHLGNGGCEYLCLPAPHITARSPKFTCACP 697
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTM--VNGTC--MAPSSFLIYAQRNILSRLITDP 194
N C +C+ G YKCEC Y M V +C + ++L + R+ + ++ D
Sbjct: 360 NTCSQICINLVG-----GYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDR 414
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRAS 236
++ IP +KN+ ALD + + +IYW D + I AS
Sbjct: 415 SE---YTSVIPRLKNVVALDMEIASNKIYWSDLTQRKIYSAS 453
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor OS=Gallus gallus GN=VLDLR
PE=1 SV=1
Length = 863
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 88/175 (50%), Gaps = 10/175 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLH-KVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
M WSDWG IE++ ++G R L+ +++ N + ++ + R+Y+++ + S+
Sbjct: 590 MYWSDWG--EPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLSSV 647
Query: 59 DIEGRNKITIVAN--IEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D+ G+++ ++ + P+ LT+++ +F+ + + ++ +K + V ++ +
Sbjct: 648 DLNGQDRRLVLKSHMFLPHPLALTIFEDRVFWIDGENEAVYGANKFTGAELVTLVNNLND 707
Query: 117 INDMLIYHPSRQ-TGWNKCA--VANNECDYLCLATPG-RGGGLNYKCECPTHYTM 167
D+++YH Q +G N C + N C YLCL P Y C CP Y +
Sbjct: 708 AQDIIVYHELVQPSGRNWCEENMVNGGCSYLCLPAPQINEHSPKYTCTCPAGYFL 762
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 141 CDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMA--PSSFLIYAQRNILSRLITDPTQ 196
C +C+ G YKCEC Y M G C A LI+ R + ++ + +
Sbjct: 424 CSQICINLKG-----GYKCECSRGYQMDLATGVCKAVGKEPCLIFTNRRDIRKIGLERKE 478
Query: 197 CPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRAS 236
+ ++N ALD D +++YW D +AI AS
Sbjct: 479 ---YIQLVEQLRNTVALDADIAEQKLYWADFSQKAIFSAS 515
>sp|Q6X0I2|VGR_SOLIN Vitellogenin receptor OS=Solenopsis invicta GN=VgR PE=2 SV=1
Length = 1782
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVK---ANSLTVNYDEKRVYYVNLLSSSIES 57
M WSDWG I + +DG + ++ VK S+T++Y +R+Y+V+ S IES
Sbjct: 419 MYWSDWGTF--PHIAVAGMDGKNVRIFVN-VKLEWPKSVTIDYPNERLYWVDAKSKMIES 475
Query: 58 IDIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDK-TSHTRSVIYRSSEKE 116
+ ++G ++ ++ +I +P ++T++++++++S+W+ I+ +K T ++ R+ K
Sbjct: 476 VRLDGTDRRIVLHDIIQEPFSMTVFQNKLYWSDWESNGIQTCNKFTGKDWKILIRNHNKP 535
Query: 117 INDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCEC 161
+ + + + N C +N C LC+ +G Y C C
Sbjct: 536 YSVHMDHSAIKPNIDNPC--YSNPCSQLCMLNQNKG----YTCGC 574
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 6 WGAGNGGTIERSALDGTQRSVLLHKVKANSLTVNYDEKRVYYV---NLLSS-------SI 55
W T+E S DG+QR V+L ++L+++ E+ +Y++ NLLSS S
Sbjct: 1523 WSDDFYKTVESSNFDGSQRKVVLTLNMNHALSISIFEQSLYFLSSDNLLSSCKMYGKRSC 1582
Query: 56 ESIDIEGRNKITIVA 70
E ++I N + +
Sbjct: 1583 EHVNIGANNVFRLFS 1597
>sp|P01132|EGF_MOUSE Pro-epidermal growth factor OS=Mus musculus GN=Egf PE=1 SV=2
Length = 1217
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D G IE ++L G+ R ++ ++ + +T++Y +Y+ + S IE
Sbjct: 618 LFWTD--VGMSPRIESASLQGSDRVLIASSNLLEPSGITIDYLTDTLYWCDTKRSVIEMA 675
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G + ++ N P +L +++ ++ S+W S+ + +K + V + S + +
Sbjct: 676 NLDGSKRRRLIQNDVGHPFSLAVFEDHLWVSDWAIPSVIRVNKRTGQNRVRLQGSMLKPS 735
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV-NGTCMAPSS 177
+++ HP + G + C N C+++C + G +C C + +G P
Sbjct: 736 SLVVVHPLAKPGADPCLYRNGGCEHICQESLG-----TARCLCREGFVKAWDGKMCLPQD 790
Query: 178 FLIYAQRNI-LSRLIT 192
+ I + N LS+ +T
Sbjct: 791 YPILSGENADLSKEVT 806
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 16/111 (14%)
Query: 138 NNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMA--PSSFLIYAQRNILSRLITD 193
N C +CL P R G +++C+C Y + + +C A P L++A + + D
Sbjct: 450 NGGCSQICL--PLRPG--SWECDCFPGYDLQSDRKSCAASGPQPLLLFANSQDIRHMHFD 505
Query: 194 PTQCPDSPYEI---PNVKNIKALDYDPVARQIYWIDSKLQAIKRASENATR 241
T Y++ + + ALDYDPV +IY+ + L+ I+RA+ + ++
Sbjct: 506 GTD-----YKVLLSRQMGMVFALDYDPVESKIYFAQTALKWIERANMDGSQ 551
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 162 PTHYTMVNGTCMAPSSFLIYAQRNILSRLITDPTQCPDSPYEIPNVKNIKALDYDPVARQ 221
P + +GTC P+ FL+++Q +SR+ D T + + + +D +
Sbjct: 38 PLERSERSGTCAGPAPFLVFSQGKSISRIDPDGT---NHQQLVVDAGISADMDIHYKKER 94
Query: 222 IYWIDSKLQAIKRASENATRI 242
+YW+D + Q + R N T +
Sbjct: 95 LYWVDVERQVLLRVFLNGTGL 115
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 132 NKCAVANNECDYLCLATPGRGGGLNYKCECPTHYTMV 168
N+CA N+ C C TPG +Y C CPT + ++
Sbjct: 364 NECATQNHGCTLGCENTPG-----SYHCTCPTGFVLL 395
>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus laevis GN=ldlr-b PE=2
SV=1
Length = 892
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG IE+ L+G R L+ N +T++ +R+Y+V+ S+ I
Sbjct: 529 MYWTDWGLP--AKIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHSLSCI 586
Query: 59 DIEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
DI G N+ T++++ P LT+++ +F+++ + +I + T I + +E
Sbjct: 587 DITGENRRTVLSDETHLAHPFGLTIFEDLVFWTDIENEAI--FSAKRLTGENIMKVAEHL 644
Query: 117 IN--DMLIYHPSRQ-TGWNKCA---VANNECDYLCLATPG-RGGGLNYKCECP 162
++ D+++YH RQ N C + N C YLCL P + C CP
Sbjct: 645 LSPEDIVLYHNLRQPKAENWCESHHLGNGGCGYLCLPAPHVNARSPKFTCACP 697
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTM--VNGTC--MAPSSFLIYAQRNILSRLITDP 194
N C +C+ G YKCEC Y M V +C + ++L + R+ + ++ D
Sbjct: 360 NTCTQICINLHG-----GYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDR 414
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRAS 236
++ IP +KN+ ALD + + +IYW D + I AS
Sbjct: 415 SE---YTSFIPRLKNVVALDMEIASNKIYWSDLTQRKIYSAS 453
>sp|P35951|LDLR_MOUSE Low-density lipoprotein receptor OS=Mus musculus GN=Ldlr PE=1 SV=2
Length = 862
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQ-RSVLLHKVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG I++ L+G S++ ++ N +T++ R+Y+V+ SI SI
Sbjct: 531 MYWTDWGTP--AKIKKGGLNGVDIHSLVTENIQWPNGITLDLSSGRLYWVDSKLHSISSI 588
Query: 59 DIEGRNKITIV--ANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D+ G N+ TI+ N P +L +Y+ ++++++ +I ++ + + + +
Sbjct: 589 DVNGGNRKTILEDENRLAHPFSLAIYEDKVYWTDVINEAIFSANRLTGSDVNLVAENLLS 648
Query: 117 INDMLIYHPSRQT-GWNKCA----VANNECDYLCLATPGRG-GGLNYKCECP 162
D++++H Q G N C + N C YLCL P G + C CP
Sbjct: 649 PEDIVLFHKVTQPRGVNWCETTALLPNGGCQYLCLPAPQIGPHSPKFTCACP 700
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTMVNGT--CMAPSS--FLIYAQRNILSRLITDP 194
+ C LC+ G +YKCEC + M T C A S +L++ R+ + ++ D
Sbjct: 363 DTCSQLCVNLEG-----SYKCECQAGFHMDPHTRVCKAVGSIGYLLFTNRHEVRKMTLDR 417
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
++ +PN+KN+ ALD + +IYW D + I A
Sbjct: 418 SE---YTSLLPNLKNVVALDTEVTNNRIYWSDLSQKKIYSA 455
>sp|P35950|LDLR_CRIGR Low-density lipoprotein receptor OS=Cricetulus griseus GN=LDLR PE=3
SV=2
Length = 862
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQ-RSVLLHKVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG I++ L+G S++ ++ N +T++ R+Y+V+ SI SI
Sbjct: 531 MYWTDWGTP--AKIKKGGLNGVDIYSLVTEDIQWPNGITLDIPSGRLYWVDSKLHSISSI 588
Query: 59 DIEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D+ G N+ TI+ + + P +L +Y+ ++F+++ +I ++ + + + +
Sbjct: 589 DVNGGNRKTILEDEKQLAHPFSLAIYEDKVFWTDVINEAIFSANRLTGSDVNLVAENLLS 648
Query: 117 INDMLIYHPSRQT-GWNKC---AVANNECDYLCLATPG-RGGGLNYKCECP 162
D++++H Q G N C A+ N C YLCL P + C CP
Sbjct: 649 PEDIVLFHNITQPRGVNWCERTALPNGGCQYLCLPAPQINPHSPKFTCACP 699
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTMVNGT--CMAPSS--FLIYAQRNILSRLITDP 194
+ CD LC+ G +YKCEC + M T C A S +L++ R+ + ++ D
Sbjct: 363 DTCDQLCVNLEG-----SYKCECRAGFHMDPHTRVCKAVGSVAYLLFTNRHEVRKMTLDR 417
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWID 226
++ IPN+KN+ ALD + +IYW D
Sbjct: 418 SE---YTSLIPNLKNVVALDTEVANNRIYWSD 446
>sp|Q28832|LDLR_PIG Low-density lipoprotein receptor (Fragment) OS=Sus scrofa GN=LDLR
PE=1 SV=2
Length = 811
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQ-RSVLLHKVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG I++ L+G S++ ++ N +T++ R+Y+V+ SI SI
Sbjct: 502 MYWTDWGTP--AKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSI 559
Query: 59 DIEGRNKITIVANIEDK-----PVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSS 113
D+ G N+ T+ +EDK P +L +++ ++F+++ +I + T S I+ +
Sbjct: 560 DVNGGNRKTV---LEDKTKLAHPFSLAIFEDKVFWTDIINEAI--FSANRLTGSDIHLMA 614
Query: 114 EKEIN--DMLIYHPSRQT-GWNKC---AVANNECDYLCLATPG-RGGGLNYKCECP 162
E ++ D++++H Q G N C A+ N C YLCL P + C CP
Sbjct: 615 ENLLSPEDIVLFHNLTQPRGVNWCERTALQNGGCQYLCLPAPQINPRSPKFTCACP 670
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 12/92 (13%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTM--VNGTCMAPS--SFLIYAQRNILSRLITDP 194
+ C +C+ G +YKC+C + + + C A ++L + R+ + ++ D
Sbjct: 333 DACSQICVNLEG-----SYKCQCEEGFQLEPLTKACKAIGTIAYLFFTNRHEVRKMTLDR 387
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWID 226
++ IPN+KN+ ALD + + +IYW D
Sbjct: 388 SE---YTSLIPNLKNVVALDTEVASNRIYWSD 416
>sp|P01130|LDLR_HUMAN Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Length = 860
Score = 60.5 bits (145), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQ-RSVLLHKVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG I++ L+G S++ ++ N +T++ R+Y+V+ SI SI
Sbjct: 531 MYWTDWGTP--AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 588
Query: 59 DIEGRNKITIVANIEDK-----PVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSS 113
D+ G N+ TI +ED+ P +L +++ ++F+++ +I ++ + + + +
Sbjct: 589 DVNGGNRKTI---LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAEN 645
Query: 114 EKEINDMLIYHPSRQT-GWNKC---AVANNECDYLCLATPG-RGGGLNYKCECPTHYTMV 168
DM+++H Q G N C ++N C YLCL P + C CP +
Sbjct: 646 LLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLA 705
Query: 169 NG--TCMAPSSFLIYAQRNILSRLITDPT 195
+C+ + + Q RL T
Sbjct: 706 RDMRSCLTEAEAAVATQETSTVRLKVSST 734
Score = 39.7 bits (91), Expect = 0.020, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTMVNGT--CMAPSS--FLIYAQRNILSRLITDP 194
+ C LC+ G YKC+C + + T C A S +L + R+ + ++ D
Sbjct: 362 DTCSQLCVNLEG-----GYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDR 416
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWID 226
++ IPN++N+ ALD + + +IYW D
Sbjct: 417 SEYTSL---IPNLRNVVALDTEVASNRIYWSD 445
>sp|P01133|EGF_HUMAN Pro-epidermal growth factor OS=Homo sapiens GN=EGF PE=1 SV=2
Length = 1207
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+D G IE S+L G R V+ + + +T+++ ++Y+ + S IE
Sbjct: 612 LFWTD--TGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMA 669
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+++G + + N P + +++ +++S+W S+ + +K + V + S + +
Sbjct: 670 NLDGSKRRRLTQNDVGHPFAVAVFEDYVWFSDWAMPSVMRVNKRTGKDRVRLQGSMLKPS 729
Query: 119 DMLIYHPSRQTGWNKCAVANNECDYLC 145
+++ HP + G + C N C+++C
Sbjct: 730 SLVVVHPLAKPGADPCLYQNGGCEHIC 756
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 161 CPTHYTMVNG--TCMAPSSFLIYAQRNILSRLITDPTQCPDSPYE--IPNVKNIKALDYD 216
CP NG TC+ P+ FLI++ N + R+ T+ T YE + + +D+
Sbjct: 28 CPEGTLAGNGNSTCVGPAPFLIFSHGNSIFRIDTEGTN-----YEQLVVDAGVSVIMDFH 82
Query: 217 PVARQIYWIDSKLQAIKRASENATR 241
++IYW+D + Q ++R N +R
Sbjct: 83 YNEKRIYWVDLERQLLQRVFLNGSR 107
Score = 38.5 bits (88), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 6 WGAGNGGTIERSALDGTQRSVLLHKV-KANSLTVNYDEKRVYYVNL----LSSSIESIDI 60
W + G++ R+ LDG LL K +++++ +KR++++ +S I S D
Sbjct: 174 WSSEVAGSLYRADLDGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDY 233
Query: 61 EGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYR----SSEKE 116
+G + + ++L+ IFYS W ++I +K HT + R SS
Sbjct: 234 DGGSVHISKHPTQHNLFAMSLFGDRIFYSTWKMKTIWIANK--HTGKDMVRINLHSSFVP 291
Query: 117 INDMLIYHPSRQ 128
+ ++ + HP Q
Sbjct: 292 LGELKVVHPLAQ 303
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 138 NNECDYLCLA-TPGRGGGLNYKCECPTHYTMV--NGTCMA--PSSFLIYAQRNILSRLIT 192
N C LC+ +P ++++C+C Y + +C A P FL++A + +
Sbjct: 444 NGGCSQLCVPLSP-----VSWECDCFPGYDLQLDEKSCAASGPQPFLLFANSQDIRHMHF 498
Query: 193 DPTQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRASENATR 241
D T + + ALD+DPV +IY+ + L+ I+RA+ + ++
Sbjct: 499 DGTD--YGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERANMDGSQ 545
>sp|P10493|NID1_MOUSE Nidogen-1 OS=Mus musculus GN=Nid1 PE=1 SV=2
Length = 1245
Score = 58.9 bits (141), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 36/178 (20%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DW N IE S +DGT R +L N LT + ++ +V+ + E +
Sbjct: 1076 LYWTDWNRDNP-KIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 1134
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKEIN 118
+ + ++ ++ P +T Y ++Y++W S+ D + KE++
Sbjct: 1135 NPAQPGRRKVLEGLQ-YPFAVTSYGKNLYYTDWKTNSVIAMD----------LAISKEMD 1183
Query: 119 DMLIYHPSRQT--------------GWNKCAVANNECDYLCLATPGRGGGLNYKCECP 162
+HP +QT G N C+V N C +LCL TPG + C CP
Sbjct: 1184 ---TFHPHKQTRLYGITIALSQCPQGHNYCSVNNGGCTHLCLPTPG-----SRTCRCP 1233
>sp|P14543|NID1_HUMAN Nidogen-1 OS=Homo sapiens GN=NID1 PE=1 SV=3
Length = 1247
Score = 57.0 bits (136), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHKVKA--NSLTVNYDEKRVYYVNLLSSSIESI 58
+ W+DW N IE S +DGT R +L+ N LT + ++ +V+ ++ E +
Sbjct: 1078 LYWTDWNRDNP-KIETSYMDGTNRRILVQDDLGLPNGLTFDAFSSQLCWVDAGTNRAECL 1136
Query: 59 DIEGRNKITIVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE-- 116
+ ++ + ++ P +T Y +++++W S+ D + ++ ++
Sbjct: 1137 NPSQPSRRKALEGLQ-YPFAVTSYGKNLYFTDWKMNSVVALDLAISKETDAFQPHKQTRL 1195
Query: 117 --INDMLIYHPSRQTGWNKCAVANNECDYLCLATPGRGGGLNYKCECP 162
I L P G N C+V N C +LCLATPG + C CP
Sbjct: 1196 YGITTALSQCPQ---GHNYCSVNNGGCTHLCLATPG-----SRTCRCP 1235
>sp|P35952|LDLR_RAT Low-density lipoprotein receptor OS=Rattus norvegicus GN=Ldlr PE=2
SV=1
Length = 879
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQ-RSVLLHKVK-ANSLTVNYDEKRVYYVNLLSSSIESI 58
M W+DWG I++ L+G S++ ++ N +T++ R+Y+V+ SI SI
Sbjct: 531 MYWTDWGTP--AKIKKGGLNGVDIYSLVTEDIQWPNGITLDLPSGRLYWVDSKLHSISSI 588
Query: 59 DIEGRNKITIVANIED--KPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
D+ G + TI+ + + P +L +Y+ ++++++ +I ++ + + + +
Sbjct: 589 DVNGGGRKTILEDEKQLAHPFSLAIYEDKVYWTDVLNEAIFSANRLTGSDVNLVAKNLMS 648
Query: 117 INDMLIYHPSRQT-GWNKC---AVANNECDYLCLATPG-RGGGLNYKCECP 162
D++++H Q G N C + N C Y+CL P + C CP
Sbjct: 649 PEDIVLFHNVTQPRGVNWCEATVLPNGGCQYMCLPAPQISAHSPKFTCACP 699
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 139 NECDYLCLATPGRGGGLNYKCECPTHYTMVNGT--CMAPSS--FLIYAQRNILSRLITDP 194
+ C LC+ G ++KCEC + M T C A S FL++ R+ + ++ D
Sbjct: 363 DTCSQLCVNLEG-----SFKCECRAGFHMDPHTRVCKAVGSIGFLLFTNRHEVRKMTLDR 417
Query: 195 TQCPDSPYEIPNVKNIKALDYDPVARQIYWIDSKLQAIKRA 235
++ IPN+KN+ ALD + +IYW D + I A
Sbjct: 418 SE---YTSLIPNLKNVVALDTEVANNRIYWSDLSQRKIYSA 455
>sp|P01131|LDLR_BOVIN Low-density lipoprotein receptor (Fragment) OS=Bos taurus GN=LDLR
PE=2 SV=1
Length = 264
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 54 SIESIDIEGRNKITIVANIEDK-----PVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSV 108
SI SID+ G N+ T+ +EDK P +L +++ ++F+++ +I ++ + +
Sbjct: 5 SISSIDVNGGNRKTV---LEDKKKLAHPFSLAIFEDKVFWTDVINEAIFSANRLTGSDIS 61
Query: 109 IYRSSEKEINDMLIYHPSRQT-GWNKC---AVANNECDYLCLATPG-RGGGLNYKCECP 162
+ + D++++H Q G N C A+ N C YLCL P + C CP
Sbjct: 62 LMAENLLSPEDIVLFHNLTQPRGVNWCERTALRNGGCQYLCLPAPQINPRSPKFTCACP 120
>sp|B3NBB6|CUE_DROER Protein cueball OS=Drosophila erecta GN=cue PE=3 SV=1
Length = 644
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 13 TIERSALDGTQRSVLLHKV--KANSLTVNYDEKRVYYVNLLSS---SIESIDIEGRNKIT 67
T+ER LDG R+V+++ + V+ R+++++ L +IES ++G +++
Sbjct: 180 TVERINLDGNNRTVIINSTIDMPRGIVVDQLSDRLFWIDDLKGVFFAIESSKLDGSDRLV 239
Query: 68 IVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTR 106
++ + +P+ L + I++++ RS+ + K R
Sbjct: 240 VLKDKHHEPLNLAVTNDAIYWTDRTTRSVWSHPKVPVIR 278
>sp|B4PD96|CUE_DROYA Protein cueball OS=Drosophila yakuba GN=cue PE=3 SV=1
Length = 644
Score = 37.7 bits (86), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 13 TIERSALDGTQRSVLLHKV--KANSLTVNYDEKRVYYVNLLSS---SIESIDIEGRNKIT 67
T+ER LDG+ R+V+++ + V+ R+++++ L S+ES ++G ++
Sbjct: 180 TVERIDLDGSNRTVIVNSDIDMPRGIVVDQLSDRLFWIDDLKGVFFSVESSKLDGSDRQV 239
Query: 68 IVANIEDKPVTLTLYKSEIFYSNWDKRSIEKYDKTSHTRSVIYRSSEKE 116
++ + +P+ L + I++++ RS+ + K R E+E
Sbjct: 240 VLKDKHHEPLNLAVTNDAIYWTDRTTRSVWSHPKVPVIRVTTTSKPEEE 288
>sp|B5DFC9|NID2_RAT Nidogen-2 OS=Rattus norvegicus GN=Nid2 PE=2 SV=1
Length = 1396
Score = 37.4 bits (85), Expect = 0.087, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 1 MLWSDWGAGNGGTIERSALDGTQRSVLLHK--VKANSLTVNYDEKRVYYV--NLLSSSIE 56
M W+D G IER+ LDG++R VL H V ++TV+ +Y+ N + IE
Sbjct: 1221 MYWTDSGLDK---IERAGLDGSERKVLFHTDLVNPRAITVDPIRGNLYWTDWNREAPKIE 1277
Query: 57 SIDIEGRNKITIV 69
+ ++G N+ ++
Sbjct: 1278 TSSLDGENRRILI 1290
>sp|P05099|MATN1_CHICK Cartilage matrix protein OS=Gallus gallus GN=MATN1 PE=1 SV=2
Length = 493
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 134 CAVANNECDYLCLATPGRGGGLNYKCECPTHYTMVNG--TCMAPS 176
CA +++C+ +C++TPG +YKC C +T+ N TC A S
Sbjct: 225 CATGDHDCEQICISTPG-----SYKCACKEGFTLNNDGKTCSACS 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,646,854
Number of Sequences: 539616
Number of extensions: 3545683
Number of successful extensions: 9771
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 9054
Number of HSP's gapped (non-prelim): 540
length of query: 242
length of database: 191,569,459
effective HSP length: 114
effective length of query: 128
effective length of database: 130,053,235
effective search space: 16646814080
effective search space used: 16646814080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)