Query psy13635
Match_columns 357
No_of_seqs 292 out of 2129
Neff 9.3
Searched_HMMs 46136
Date Fri Aug 16 16:19:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13635.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13635hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1214|consensus 100.0 4.3E-36 9.4E-41 285.7 22.4 243 81-342 989-1233(1289)
2 KOG1214|consensus 100.0 1.2E-34 2.7E-39 275.8 23.2 266 37-326 986-1264(1289)
3 PLN02919 haloacid dehalogenase 99.9 2.2E-24 4.7E-29 225.3 38.5 264 66-339 563-892 (1057)
4 PLN02919 haloacid dehalogenase 99.9 1.5E-21 3.3E-26 204.0 32.9 227 111-343 562-841 (1057)
5 PF08450 SGL: SMP-30/Gluconola 99.9 4.5E-21 9.8E-26 171.0 30.6 226 73-324 2-245 (246)
6 KOG1215|consensus 99.9 4.9E-22 1.1E-26 206.8 27.5 257 34-354 401-658 (877)
7 PF08450 SGL: SMP-30/Gluconola 99.9 5.2E-21 1.1E-25 170.6 27.6 211 119-354 2-231 (246)
8 PF10282 Lactonase: Lactonase, 99.8 5.7E-15 1.2E-19 138.1 37.8 297 50-355 13-345 (345)
9 PRK11028 6-phosphogluconolacto 99.7 2.2E-14 4.7E-19 133.5 35.4 293 44-355 4-327 (330)
10 KOG4659|consensus 99.7 8.2E-16 1.8E-20 153.8 26.7 244 40-292 374-689 (1899)
11 COG3386 Gluconolactonase [Carb 99.7 5.5E-15 1.2E-19 134.3 27.0 235 69-328 23-279 (307)
12 COG3391 Uncharacterized conser 99.7 7.7E-13 1.7E-17 125.2 32.8 269 52-345 13-293 (381)
13 KOG4659|consensus 99.7 1.2E-14 2.5E-19 145.8 20.7 245 69-334 363-690 (1899)
14 COG3386 Gluconolactonase [Carb 99.6 9E-14 2E-18 126.3 24.0 217 109-348 17-255 (307)
15 PF10282 Lactonase: Lactonase, 99.6 3.4E-12 7.4E-17 119.4 34.6 265 34-313 41-344 (345)
16 TIGR03866 PQQ_ABC_repeats PQQ- 99.6 2.8E-11 6E-16 110.1 39.1 279 49-354 10-297 (300)
17 TIGR02604 Piru_Ver_Nterm putat 99.6 4.4E-13 9.6E-18 126.3 27.5 239 69-326 12-341 (367)
18 PRK11028 6-phosphogluconolacto 99.6 4.4E-12 9.4E-17 118.1 32.5 269 33-314 38-327 (330)
19 COG2706 3-carboxymuconate cycl 99.5 1.7E-10 3.7E-15 103.1 34.5 295 49-355 15-344 (346)
20 COG3391 Uncharacterized conser 99.5 2.6E-11 5.7E-16 114.8 31.0 249 31-302 32-291 (381)
21 PF07995 GSDH: Glucose / Sorbo 99.5 5.9E-11 1.3E-15 110.2 27.1 246 70-331 1-331 (331)
22 KOG1215|consensus 99.5 1.2E-11 2.7E-16 129.2 25.2 306 43-354 211-617 (877)
23 COG4257 Vgb Streptogramin lyas 99.5 8.6E-11 1.9E-15 101.5 24.7 255 61-340 52-310 (353)
24 PF06977 SdiA-regulated: SdiA- 99.4 3.7E-10 7.9E-15 99.5 27.7 198 116-332 21-247 (248)
25 TIGR03866 PQQ_ABC_repeats PQQ- 99.4 3.6E-09 7.7E-14 96.2 35.3 253 36-314 37-298 (300)
26 TIGR02658 TTQ_MADH_Hv methylam 99.4 6.5E-09 1.4E-13 96.1 35.2 275 40-352 11-347 (352)
27 PF06977 SdiA-regulated: SdiA- 99.4 2.7E-09 5.9E-14 94.0 29.0 206 69-291 20-247 (248)
28 KOG1520|consensus 99.4 2.9E-11 6.2E-16 109.8 16.3 203 109-323 57-282 (376)
29 COG4257 Vgb Streptogramin lyas 99.3 2E-09 4.3E-14 93.1 24.1 258 50-333 83-345 (353)
30 TIGR02604 Piru_Ver_Nterm putat 99.3 1.1E-09 2.3E-14 103.4 23.9 202 109-334 4-299 (367)
31 PF02239 Cytochrom_D1: Cytochr 99.3 3.8E-08 8.3E-13 92.6 31.9 293 43-355 7-365 (369)
32 PF07995 GSDH: Glucose / Sorbo 99.2 5.1E-09 1.1E-13 97.3 24.5 225 116-354 1-312 (331)
33 KOG1520|consensus 99.2 9.4E-09 2E-13 93.6 23.8 183 82-282 75-282 (376)
34 COG2706 3-carboxymuconate cycl 99.2 2.5E-07 5.3E-12 83.1 31.8 251 33-296 43-323 (346)
35 TIGR02658 TTQ_MADH_Hv methylam 99.2 2.6E-07 5.7E-12 85.5 31.6 250 81-355 11-306 (352)
36 TIGR03606 non_repeat_PQQ dehyd 99.1 2.1E-07 4.6E-12 88.7 30.1 252 62-330 21-430 (454)
37 cd00200 WD40 WD40 domain, foun 99.0 2.2E-05 4.8E-10 69.4 35.4 268 37-330 17-286 (289)
38 PRK04792 tolB translocation pr 98.9 2.5E-06 5.5E-11 82.7 29.4 228 94-346 199-435 (448)
39 PF03022 MRJP: Major royal jel 98.9 1.1E-06 2.3E-11 79.9 24.2 190 118-324 2-254 (287)
40 PRK04792 tolB translocation pr 98.9 3E-06 6.6E-11 82.1 28.1 226 51-301 199-432 (448)
41 PF02239 Cytochrom_D1: Cytochr 98.9 1.1E-05 2.4E-10 76.1 30.2 259 32-312 39-363 (369)
42 KOG4499|consensus 98.9 4.7E-07 1E-11 76.9 18.6 205 120-344 18-250 (310)
43 COG3204 Uncharacterized protei 98.9 1.8E-06 3.8E-11 76.1 22.7 198 117-334 86-311 (316)
44 TIGR03118 PEPCTERM_chp_1 conse 98.9 2.9E-06 6.2E-11 75.2 24.2 225 111-353 17-297 (336)
45 TIGR03606 non_repeat_PQQ dehyd 98.8 8.3E-07 1.8E-11 84.7 21.8 172 109-292 22-260 (454)
46 PF00058 Ldl_recept_b: Low-den 98.8 1.6E-08 3.4E-13 63.5 6.8 41 188-228 1-42 (42)
47 PRK04043 tolB translocation pr 98.8 1.9E-05 4.2E-10 75.7 30.9 237 82-345 155-409 (419)
48 PRK05137 tolB translocation pr 98.8 9.1E-06 2E-10 78.6 29.0 227 50-301 182-419 (435)
49 PRK05137 tolB translocation pr 98.8 1.9E-05 4.1E-10 76.5 31.2 226 94-345 183-421 (435)
50 PRK04922 tolB translocation pr 98.8 5E-06 1.1E-10 80.4 26.9 227 51-302 185-419 (433)
51 PRK04043 tolB translocation pr 98.8 4.2E-05 9.2E-10 73.4 31.9 226 50-303 169-409 (419)
52 PRK00178 tolB translocation pr 98.8 3.3E-05 7.1E-10 74.6 31.0 226 51-301 180-413 (430)
53 PRK04922 tolB translocation pr 98.8 1.9E-05 4.1E-10 76.4 29.0 229 94-346 185-421 (433)
54 cd00200 WD40 WD40 domain, foun 98.8 0.00012 2.5E-09 64.7 33.9 257 71-353 10-267 (289)
55 PRK00178 tolB translocation pr 98.7 3.6E-05 7.7E-10 74.4 30.3 228 94-345 180-415 (430)
56 PRK03629 tolB translocation pr 98.7 3.7E-05 8.1E-10 74.2 30.2 228 50-302 179-414 (429)
57 PRK02889 tolB translocation pr 98.7 3.3E-05 7.1E-10 74.6 29.7 239 84-346 166-413 (427)
58 PRK03629 tolB translocation pr 98.7 5.3E-05 1.1E-09 73.2 31.0 228 94-345 180-415 (429)
59 PF03022 MRJP: Major royal jel 98.7 1.6E-05 3.5E-10 72.2 25.7 204 73-284 3-255 (287)
60 COG3204 Uncharacterized protei 98.7 6.1E-06 1.3E-10 72.7 21.5 208 70-292 85-310 (316)
61 TIGR02800 propeller_TolB tol-p 98.7 4.5E-05 9.8E-10 73.2 30.0 230 93-346 170-407 (417)
62 PF03088 Str_synth: Strictosid 98.7 8.6E-08 1.9E-12 70.2 8.4 73 222-295 1-88 (89)
63 TIGR03118 PEPCTERM_chp_1 conse 98.7 2.3E-05 4.9E-10 69.6 24.8 241 63-324 15-322 (336)
64 PF00058 Ldl_recept_b: Low-den 98.7 8.3E-08 1.8E-12 60.2 7.0 40 276-315 1-41 (42)
65 PRK02889 tolB translocation pr 98.7 3.2E-05 7E-10 74.6 28.5 227 50-301 176-410 (427)
66 TIGR02800 propeller_TolB tol-p 98.7 9.3E-05 2E-09 71.0 30.0 226 51-301 171-404 (417)
67 COG2133 Glucose/sorbosone dehy 98.6 3.7E-05 8E-10 71.9 23.2 251 62-334 58-396 (399)
68 PF03088 Str_synth: Strictosid 98.5 7.4E-07 1.6E-11 65.4 8.8 71 179-252 1-88 (89)
69 PRK01742 tolB translocation pr 98.5 0.00023 5E-09 68.8 28.5 234 83-345 169-413 (429)
70 KOG4499|consensus 98.5 9E-05 2E-09 63.3 21.6 226 74-324 18-274 (310)
71 PRK01029 tolB translocation pr 98.5 0.00072 1.6E-08 65.2 30.1 230 50-302 165-411 (428)
72 PRK01742 tolB translocation pr 98.4 0.00036 7.8E-09 67.4 26.9 220 50-301 184-411 (429)
73 PRK01029 tolB translocation pr 98.4 0.0025 5.4E-08 61.5 31.2 229 93-345 165-412 (428)
74 TIGR03032 conserved hypothetic 98.3 0.0011 2.3E-08 59.7 25.5 213 109-343 41-298 (335)
75 smart00135 LY Low-density lipo 98.3 1.8E-06 4E-11 54.3 6.1 40 258-297 3-42 (43)
76 smart00135 LY Low-density lipo 98.3 2.6E-06 5.6E-11 53.6 6.0 40 111-150 3-42 (43)
77 COG2133 Glucose/sorbosone dehy 98.2 0.0004 8.7E-09 65.1 19.9 215 44-295 143-398 (399)
78 COG5276 Uncharacterized conser 98.1 0.0076 1.7E-07 53.5 27.4 257 41-329 96-364 (370)
79 PF05096 Glu_cyclase_2: Glutam 98.0 0.0043 9.3E-08 54.9 22.9 157 178-343 47-211 (264)
80 PF06433 Me-amine-dh_H: Methyl 98.0 0.011 2.3E-07 54.2 26.4 273 51-351 18-336 (342)
81 COG5276 Uncharacterized conser 97.9 0.013 2.8E-07 52.1 27.9 226 77-331 91-325 (370)
82 PRK02888 nitrous-oxide reducta 97.9 0.0029 6.4E-08 62.3 21.6 227 79-334 138-403 (635)
83 PF01436 NHL: NHL repeat; Int 97.9 5E-05 1.1E-09 42.9 4.9 28 263-291 1-28 (28)
84 PF13360 PQQ_2: PQQ-like domai 97.8 0.02 4.3E-07 50.1 28.8 181 128-340 36-235 (238)
85 KOG0285|consensus 97.6 0.045 9.7E-07 49.9 22.5 248 67-343 148-397 (460)
86 PF01436 NHL: NHL repeat; Int 97.6 0.00021 4.5E-09 40.4 4.8 28 116-144 1-28 (28)
87 PF05096 Glu_cyclase_2: Glutam 97.6 0.05 1.1E-06 48.3 30.7 194 70-293 44-260 (264)
88 PRK02888 nitrous-oxide reducta 97.5 0.042 9E-07 54.5 21.8 213 51-294 153-404 (635)
89 TIGR03032 conserved hypothetic 97.4 0.034 7.3E-07 50.3 19.2 171 174-354 47-249 (335)
90 KOG0291|consensus 97.4 0.15 3.3E-06 50.8 33.6 199 71-293 308-507 (893)
91 PF02333 Phytase: Phytase; In 97.4 0.09 1.9E-06 49.3 22.7 221 75-315 58-319 (381)
92 PF13449 Phytase-like: Esteras 97.3 0.044 9.6E-07 50.9 19.4 174 115-295 18-252 (326)
93 PF02333 Phytase: Phytase; In 97.2 0.18 3.9E-06 47.3 25.3 117 217-335 154-290 (381)
94 PF00930 DPPIV_N: Dipeptidyl p 97.2 0.12 2.6E-06 48.5 21.4 121 193-315 203-336 (353)
95 KOG0291|consensus 97.2 0.31 6.7E-06 48.8 32.1 189 69-283 349-540 (893)
96 KOG1446|consensus 96.9 0.28 6E-06 44.0 29.9 254 70-351 14-278 (311)
97 COG4946 Uncharacterized protei 96.9 0.4 8.6E-06 45.5 24.3 131 134-283 377-508 (668)
98 KOG0285|consensus 96.9 0.18 3.9E-06 46.1 18.0 162 111-294 146-307 (460)
99 PF13449 Phytase-like: Esteras 96.9 0.22 4.7E-06 46.3 19.5 124 68-196 17-167 (326)
100 COG0823 TolB Periplasmic compo 96.8 0.54 1.2E-05 45.3 22.7 229 93-345 173-411 (425)
101 PF05787 DUF839: Bacterial pro 96.8 0.15 3.3E-06 50.4 18.5 150 79-240 255-456 (524)
102 KOG0279|consensus 96.8 0.35 7.5E-06 42.8 27.9 249 72-343 17-270 (315)
103 COG4946 Uncharacterized protei 96.7 0.63 1.4E-05 44.3 20.8 173 43-239 334-509 (668)
104 KOG0315|consensus 96.6 0.41 8.9E-06 41.8 31.5 278 41-344 9-297 (311)
105 PF05787 DUF839: Bacterial pro 96.5 0.043 9.2E-07 54.2 12.8 79 113-196 346-455 (524)
106 KOG0272|consensus 96.4 0.82 1.8E-05 42.7 23.3 239 66-328 213-453 (459)
107 PTZ00420 coronin; Provisional 96.4 1.2 2.6E-05 44.5 33.4 212 68-297 72-296 (568)
108 PTZ00421 coronin; Provisional 96.3 1.2 2.7E-05 43.8 36.6 213 68-297 73-293 (493)
109 KOG0263|consensus 96.3 1.5 3.2E-05 44.0 21.8 204 62-294 443-649 (707)
110 TIGR03300 assembly_YfgL outer 96.2 1.1 2.4E-05 42.2 33.6 229 82-344 105-347 (377)
111 PRK11138 outer membrane biogen 96.1 1.3 2.8E-05 42.2 30.9 225 82-343 120-361 (394)
112 PF07433 DUF1513: Protein of u 96.0 1.1 2.4E-05 40.7 28.9 193 123-335 57-285 (305)
113 PF13360 PQQ_2: PQQ-like domai 96.0 0.92 2E-05 39.4 27.7 186 81-297 35-233 (238)
114 KOG4649|consensus 96.0 0.47 1E-05 41.8 14.6 141 181-350 36-180 (354)
115 KOG0315|consensus 96.0 0.99 2.1E-05 39.5 27.9 251 36-313 47-307 (311)
116 PF01731 Arylesterase: Arylest 95.9 0.034 7.3E-07 40.6 6.4 36 259-294 49-84 (86)
117 PRK13616 lipoprotein LpqB; Pro 95.8 2.4 5.1E-05 42.8 25.6 187 117-333 350-565 (591)
118 TIGR03300 assembly_YfgL outer 95.8 1.8 3.8E-05 40.9 27.2 217 82-340 65-302 (377)
119 PRK11138 outer membrane biogen 95.6 2.1 4.6E-05 40.7 31.6 134 187-334 256-393 (394)
120 COG3823 Glutamine cyclotransfe 95.6 1.2 2.7E-05 37.9 16.4 66 184-251 182-259 (262)
121 COG0823 TolB Periplasmic compo 95.6 2.3 5.1E-05 40.9 21.1 180 51-253 174-360 (425)
122 PF01731 Arylesterase: Arylest 95.5 0.039 8.5E-07 40.2 5.5 38 109-146 46-83 (86)
123 KOG0268|consensus 95.5 1.1 2.5E-05 41.1 15.5 269 33-334 70-346 (433)
124 PLN00181 protein SPA1-RELATED; 95.3 4.5 9.6E-05 42.5 33.1 178 49-251 554-738 (793)
125 PF06433 Me-amine-dh_H: Methyl 95.3 2.4 5.3E-05 39.1 23.2 184 35-238 41-257 (342)
126 PRK13616 lipoprotein LpqB; Pro 95.1 4.3 9.3E-05 40.9 23.8 220 43-284 322-559 (591)
127 KOG0273|consensus 94.9 3.6 7.9E-05 39.2 24.0 157 69-251 234-391 (524)
128 KOG4378|consensus 94.8 3.9 8.5E-05 39.3 23.5 225 85-334 48-279 (673)
129 KOG1446|consensus 94.8 2.9 6.3E-05 37.7 33.8 231 41-298 26-266 (311)
130 KOG0268|consensus 94.8 1.3 2.9E-05 40.7 13.9 231 31-292 111-345 (433)
131 TIGR02276 beta_rpt_yvtn 40-res 94.8 0.19 4E-06 30.8 6.3 41 186-227 2-42 (42)
132 KOG0318|consensus 94.4 5.2 0.00011 38.7 30.2 200 110-337 314-519 (603)
133 KOG0310|consensus 94.1 5.6 0.00012 38.0 24.8 257 45-329 43-303 (487)
134 KOG4328|consensus 94.0 5.7 0.00012 37.7 21.2 252 70-338 186-453 (498)
135 KOG0281|consensus 94.0 5 0.00011 36.9 17.3 256 49-339 216-481 (499)
136 KOG0272|consensus 93.6 6.6 0.00014 37.0 20.8 252 72-349 176-432 (459)
137 PLN00181 protein SPA1-RELATED; 93.4 12 0.00025 39.4 39.5 233 38-295 492-739 (793)
138 KOG1274|consensus 93.3 4.2 9E-05 41.9 15.5 158 177-342 15-175 (933)
139 TIGR02276 beta_rpt_yvtn 40-res 93.2 0.38 8.3E-06 29.3 5.6 39 315-354 2-40 (42)
140 KOG0293|consensus 93.2 7.5 0.00016 36.6 22.1 252 65-345 219-480 (519)
141 KOG0318|consensus 93.2 8.7 0.00019 37.3 29.8 214 51-296 301-519 (603)
142 PF02897 Peptidase_S9_N: Proly 93.1 8.4 0.00018 36.8 28.1 237 36-297 130-407 (414)
143 KOG0281|consensus 92.8 5.8 0.00013 36.5 14.2 186 27-251 239-428 (499)
144 PF00930 DPPIV_N: Dipeptidyl p 92.7 7.5 0.00016 36.4 16.0 91 186-277 246-341 (353)
145 KOG0276|consensus 92.6 12 0.00025 37.3 26.0 184 33-237 17-202 (794)
146 COG4247 Phy 3-phytase (myo-ino 92.6 7 0.00015 34.6 24.1 105 134-251 119-234 (364)
147 KOG0266|consensus 92.5 11 0.00024 36.7 31.5 229 40-295 170-410 (456)
148 KOG0279|consensus 92.5 7.5 0.00016 34.7 29.3 200 72-297 65-265 (315)
149 KOG4649|consensus 92.5 7.4 0.00016 34.5 24.7 137 76-259 36-173 (354)
150 KOG0289|consensus 92.4 10 0.00022 36.0 27.1 197 117-333 304-503 (506)
151 TIGR03075 PQQ_enz_alc_DH PQQ-d 92.4 13 0.00027 37.1 25.9 31 312-343 468-498 (527)
152 KOG0646|consensus 92.4 11 0.00023 36.1 21.2 203 73-295 84-308 (476)
153 KOG0266|consensus 92.3 12 0.00026 36.5 28.7 247 71-343 160-417 (456)
154 KOG4378|consensus 92.3 11 0.00025 36.3 16.1 179 52-255 103-284 (673)
155 KOG0294|consensus 92.0 9.3 0.0002 34.7 23.5 224 42-295 54-282 (362)
156 KOG0303|consensus 92.0 11 0.00023 35.4 19.2 236 35-296 51-296 (472)
157 COG3211 PhoX Predicted phospha 92.0 2.1 4.6E-05 41.9 11.1 123 115-240 415-575 (616)
158 PTZ00421 coronin; Provisional 91.8 14 0.00031 36.4 34.6 216 116-343 75-298 (493)
159 COG1520 FOG: WD40-like repeat 91.5 12 0.00027 35.1 16.6 145 186-341 67-223 (370)
160 KOG0282|consensus 91.5 9.4 0.0002 36.6 14.4 199 72-293 216-414 (503)
161 cd00216 PQQ_DH Dehydrogenases 90.9 17 0.00038 35.7 31.6 31 312-343 402-432 (488)
162 COG3823 Glutamine cyclotransfe 90.8 9.9 0.00021 32.7 18.9 193 72-294 47-259 (262)
163 KOG0282|consensus 90.5 17 0.00036 34.9 16.2 186 43-253 273-464 (503)
164 KOG2048|consensus 90.3 21 0.00046 35.7 23.3 209 67-295 379-602 (691)
165 KOG0292|consensus 90.2 26 0.00056 36.6 25.9 236 34-295 14-281 (1202)
166 smart00284 OLF Olfactomedin-li 90.1 13 0.00028 33.1 17.4 147 128-285 83-245 (255)
167 KOG0650|consensus 90.1 0.78 1.7E-05 44.8 6.2 109 32-144 569-677 (733)
168 KOG0269|consensus 89.9 15 0.00033 37.4 14.9 138 51-208 111-252 (839)
169 KOG0263|consensus 89.6 25 0.00055 35.6 18.9 189 33-249 455-647 (707)
170 KOG0645|consensus 89.3 16 0.00034 32.7 28.6 203 70-290 14-223 (312)
171 smart00284 OLF Olfactomedin-li 89.1 16 0.00034 32.5 17.0 140 82-239 83-244 (255)
172 COG3211 PhoX Predicted phospha 88.8 5.5 0.00012 39.2 10.9 112 172-284 413-574 (616)
173 KOG0303|consensus 88.5 22 0.00047 33.4 15.2 162 49-231 153-322 (472)
174 KOG2106|consensus 88.4 26 0.00056 34.1 32.0 164 172-343 326-497 (626)
175 KOG0289|consensus 88.2 24 0.00053 33.5 24.4 203 61-290 294-501 (506)
176 KOG0319|consensus 88.2 32 0.00069 34.9 22.5 236 38-297 28-271 (775)
177 COG1520 FOG: WD40-like repeat 88.0 24 0.00052 33.2 20.0 103 187-297 111-221 (370)
178 KOG4441|consensus 87.6 33 0.00072 34.5 19.4 196 119-338 325-549 (571)
179 KOG4328|consensus 87.4 28 0.0006 33.3 17.6 201 115-334 185-398 (498)
180 KOG2139|consensus 87.3 25 0.00054 32.7 24.1 233 78-334 158-430 (445)
181 KOG1539|consensus 87.2 39 0.00085 34.9 28.2 121 14-138 184-309 (910)
182 KOG2111|consensus 87.2 23 0.00051 32.3 22.1 146 188-336 105-257 (346)
183 KOG1274|consensus 87.1 41 0.0009 35.0 25.2 198 73-298 16-222 (933)
184 TIGR03075 PQQ_enz_alc_DH PQQ-d 87.0 35 0.00075 34.0 23.9 63 82-150 69-142 (527)
185 KOG0310|consensus 86.6 31 0.00068 33.2 23.4 205 51-282 91-298 (487)
186 PTZ00420 coronin; Provisional 86.5 38 0.00083 34.1 33.6 206 116-337 74-295 (568)
187 KOG1036|consensus 86.0 26 0.00057 31.7 21.0 54 47-102 72-125 (323)
188 KOG3914|consensus 86.0 30 0.00066 32.4 14.7 161 178-342 65-230 (390)
189 KOG0270|consensus 85.8 33 0.00072 32.7 20.9 196 75-292 248-447 (463)
190 KOG0284|consensus 85.5 28 0.0006 32.9 13.0 178 39-238 191-369 (464)
191 PF10647 Gmad1: Lipoprotein Lp 84.6 28 0.00062 30.9 23.8 207 118-350 25-250 (253)
192 KOG0286|consensus 84.2 32 0.00069 31.1 30.8 239 33-293 59-302 (343)
193 PF05694 SBP56: 56kDa selenium 84.1 41 0.00089 32.4 13.8 69 119-196 314-394 (461)
194 PF02191 OLF: Olfactomedin-lik 83.8 31 0.00067 30.7 22.4 195 80-287 28-242 (250)
195 PF02897 Peptidase_S9_N: Proly 83.7 41 0.0009 32.0 28.0 242 75-340 128-409 (414)
196 PF14583 Pectate_lyase22: Olig 82.7 44 0.00096 31.6 24.3 208 49-284 59-302 (386)
197 COG4247 Phy 3-phytase (myo-ino 82.4 35 0.00077 30.3 17.2 76 68-146 150-233 (364)
198 KOG2110|consensus 81.4 47 0.001 31.0 13.6 111 36-150 136-251 (391)
199 KOG2110|consensus 81.0 48 0.001 30.9 18.3 150 182-334 92-247 (391)
200 PF08662 eIF2A: Eukaryotic tra 80.2 35 0.00076 28.9 20.4 100 178-282 62-162 (194)
201 KOG3621|consensus 79.5 29 0.00063 35.1 11.4 111 220-341 126-251 (726)
202 PF14583 Pectate_lyase22: Olig 79.4 58 0.0013 30.9 22.3 160 79-260 44-233 (386)
203 PF05694 SBP56: 56kDa selenium 79.2 9.2 0.0002 36.6 7.7 62 177-238 313-393 (461)
204 KOG0276|consensus 78.9 75 0.0016 31.9 23.7 200 72-295 15-216 (794)
205 KOG0772|consensus 78.7 69 0.0015 31.4 17.0 212 109-334 160-393 (641)
206 KOG4441|consensus 77.6 83 0.0018 31.7 17.5 163 50-238 349-530 (571)
207 KOG0270|consensus 77.4 68 0.0015 30.6 18.0 187 120-335 247-449 (463)
208 KOG0292|consensus 75.7 1.1E+02 0.0024 32.2 27.5 170 73-281 209-383 (1202)
209 KOG3621|consensus 75.5 98 0.0021 31.5 22.5 189 118-334 126-352 (726)
210 PF06739 SBBP: Beta-propeller 75.0 2.7 5.9E-05 25.3 2.0 20 264-284 13-32 (38)
211 KOG0274|consensus 74.8 96 0.0021 31.0 27.0 241 67-342 246-489 (537)
212 KOG0293|consensus 74.5 81 0.0018 30.0 18.2 228 31-291 262-510 (519)
213 KOG1445|consensus 73.9 1E+02 0.0023 31.1 14.5 195 72-293 629-843 (1012)
214 PF08662 eIF2A: Eukaryotic tra 73.9 54 0.0012 27.7 17.9 93 49-147 38-133 (194)
215 cd00216 PQQ_DH Dehydrogenases 73.8 96 0.0021 30.5 26.7 61 82-147 61-128 (488)
216 KOG3914|consensus 72.9 85 0.0018 29.6 14.5 156 118-296 64-226 (390)
217 KOG0269|consensus 72.9 1.2E+02 0.0026 31.3 14.3 163 72-253 41-209 (839)
218 KOG0308|consensus 70.1 1.3E+02 0.0028 30.4 19.2 228 42-292 87-325 (735)
219 KOG0307|consensus 70.0 75 0.0016 34.0 12.1 208 69-297 115-330 (1049)
220 KOG1524|consensus 69.4 1.2E+02 0.0026 29.9 15.5 52 83-138 116-167 (737)
221 PHA02713 hypothetical protein; 67.9 1.4E+02 0.003 30.0 24.2 143 186-338 350-536 (557)
222 KOG1538|consensus 67.4 1.5E+02 0.0033 30.2 21.2 263 36-334 19-292 (1081)
223 KOG3881|consensus 66.2 1.1E+02 0.0023 28.9 11.1 110 177-291 204-316 (412)
224 KOG0646|consensus 65.0 1.4E+02 0.003 28.9 21.4 196 33-251 85-307 (476)
225 KOG1517|consensus 64.7 2.1E+02 0.0046 31.0 14.8 178 39-229 1175-1362(1387)
226 KOG0649|consensus 64.3 84 0.0018 27.8 9.5 80 263-343 114-194 (325)
227 KOG2055|consensus 63.8 1.4E+02 0.0031 28.8 23.1 190 33-249 217-415 (514)
228 KOG0278|consensus 62.9 1.1E+02 0.0024 27.2 15.0 152 72-249 145-297 (334)
229 KOG1273|consensus 62.0 1.3E+02 0.0029 27.7 21.4 179 49-250 44-225 (405)
230 PF07433 DUF1513: Protein of u 61.7 1.3E+02 0.0028 27.6 27.4 233 42-298 18-289 (305)
231 KOG2139|consensus 61.7 1.4E+02 0.0031 28.0 14.3 113 180-296 200-313 (445)
232 KOG2919|consensus 61.4 1.4E+02 0.003 27.7 19.0 247 26-294 106-369 (406)
233 PF01011 PQQ: PQQ enzyme repea 61.3 20 0.00043 21.3 3.9 28 317-345 1-28 (38)
234 TIGR03074 PQQ_membr_DH membran 60.7 2.2E+02 0.0048 29.9 23.2 23 319-342 462-484 (764)
235 KOG0286|consensus 60.1 1.4E+02 0.003 27.2 31.1 261 64-346 49-314 (343)
236 KOG0284|consensus 59.9 1.6E+02 0.0035 28.0 16.4 203 70-297 138-340 (464)
237 smart00564 PQQ beta-propeller 59.0 30 0.00065 19.3 4.4 27 314-341 4-30 (33)
238 KOG0319|consensus 58.8 2.2E+02 0.0048 29.2 26.7 227 40-289 293-530 (775)
239 KOG0283|consensus 58.2 2.3E+02 0.005 29.2 18.6 150 122-294 373-532 (712)
240 KOG0772|consensus 57.7 2E+02 0.0043 28.4 21.0 210 72-296 169-396 (641)
241 PF13570 PQQ_3: PQQ-like domai 57.4 19 0.00041 21.5 3.4 24 311-335 16-39 (40)
242 KOG0275|consensus 56.3 1.7E+02 0.0036 27.0 14.7 46 182-229 444-490 (508)
243 PHA02713 hypothetical protein; 56.1 2.3E+02 0.0049 28.5 23.0 183 82-295 303-534 (557)
244 KOG0308|consensus 54.5 2.5E+02 0.0054 28.5 18.2 173 111-295 112-286 (735)
245 KOG1407|consensus 53.9 1.7E+02 0.0036 26.3 24.1 249 70-345 20-271 (313)
246 KOG2106|consensus 53.8 2.3E+02 0.005 27.9 23.5 70 68-145 327-396 (626)
247 PF09910 DUF2139: Uncharacteri 52.8 1.9E+02 0.004 26.5 18.3 132 181-339 40-185 (339)
248 KOG0307|consensus 52.6 3.3E+02 0.0072 29.4 13.7 164 117-295 117-285 (1049)
249 PF02191 OLF: Olfactomedin-lik 52.3 1.7E+02 0.0037 26.0 18.4 133 187-325 78-239 (250)
250 KOG0295|consensus 50.6 2.2E+02 0.0048 26.7 23.2 260 38-322 117-392 (406)
251 KOG0264|consensus 50.5 2.4E+02 0.0051 27.1 21.7 161 73-251 180-347 (422)
252 KOG1408|consensus 50.1 3.1E+02 0.0068 28.4 19.6 89 266-355 599-691 (1080)
253 PF08309 LVIVD: LVIVD repeat; 49.9 60 0.0013 20.0 5.7 31 308-339 3-33 (42)
254 KOG3567|consensus 49.0 28 0.00062 33.4 4.5 35 261-296 464-498 (501)
255 KOG0316|consensus 47.8 2E+02 0.0043 25.4 18.4 137 196-341 79-219 (307)
256 KOG3567|consensus 47.2 40 0.00087 32.5 5.2 36 172-208 463-498 (501)
257 KOG0650|consensus 46.1 3.3E+02 0.0071 27.5 17.3 73 219-296 567-639 (733)
258 KOG0271|consensus 45.8 2.7E+02 0.0059 26.4 24.4 114 34-152 162-282 (480)
259 KOG1036|consensus 45.8 2.4E+02 0.0052 25.8 24.0 102 39-148 23-125 (323)
260 KOG0639|consensus 45.8 2.9E+02 0.0062 27.3 10.5 152 180-340 424-586 (705)
261 KOG0294|consensus 44.8 2.6E+02 0.0055 25.8 20.7 152 117-296 44-199 (362)
262 KOG3545|consensus 43.2 2.4E+02 0.0051 25.0 13.0 140 128-284 77-238 (249)
263 TIGR02171 Fb_sc_TIGR02171 Fibr 42.1 2.9E+02 0.0062 29.5 10.7 99 187-287 319-424 (912)
264 KOG1407|consensus 41.9 2.6E+02 0.0057 25.1 22.4 199 76-302 70-270 (313)
265 KOG0306|consensus 41.4 4.3E+02 0.0093 27.5 26.1 240 72-334 414-663 (888)
266 KOG1645|consensus 40.7 2.2E+02 0.0048 27.1 8.8 94 52-149 175-268 (463)
267 PF14339 DUF4394: Domain of un 40.2 2.6E+02 0.0056 24.6 21.5 72 70-147 26-103 (236)
268 KOG2055|consensus 39.9 3.6E+02 0.0079 26.2 20.4 197 117-333 214-415 (514)
269 PF05935 Arylsulfotrans: Aryls 39.8 3.8E+02 0.0082 26.3 17.7 154 187-346 113-312 (477)
270 KOG0283|consensus 39.1 4.6E+02 0.01 27.2 19.8 128 66-208 405-534 (712)
271 KOG2919|consensus 38.3 3.3E+02 0.0072 25.3 15.1 165 116-295 158-328 (406)
272 TIGR03074 PQQ_membr_DH membran 36.5 5.4E+02 0.012 27.1 25.6 31 312-342 687-717 (764)
273 KOG4283|consensus 36.4 3.4E+02 0.0074 24.9 25.4 228 51-297 26-280 (397)
274 KOG0273|consensus 34.6 4.5E+02 0.0097 25.7 29.2 134 41-198 247-381 (524)
275 PF05345 He_PIG: Putative Ig d 33.9 1.1E+02 0.0023 19.5 4.2 22 176-197 11-32 (49)
276 PF14517 Tachylectin: Tachylec 33.6 3.3E+02 0.0071 23.9 15.8 153 72-251 35-206 (229)
277 KOG1408|consensus 33.5 5.7E+02 0.012 26.6 18.4 111 177-292 598-711 (1080)
278 KOG0277|consensus 33.0 3.6E+02 0.0078 24.2 19.1 64 267-334 151-220 (311)
279 KOG0277|consensus 30.2 4.1E+02 0.0088 23.9 15.7 122 72-211 62-185 (311)
280 KOG2096|consensus 30.1 4.5E+02 0.0098 24.4 22.8 253 71-341 87-366 (420)
281 KOG0275|consensus 28.5 4.8E+02 0.01 24.2 13.4 84 186-272 403-488 (508)
282 KOG0296|consensus 28.4 5.1E+02 0.011 24.4 30.3 288 33-352 68-373 (399)
283 KOG0640|consensus 28.0 4.9E+02 0.011 24.1 15.4 245 63-330 165-421 (430)
284 PF14251 DUF4346: Domain of un 28.0 1.9E+02 0.0041 22.4 5.2 31 178-208 42-72 (119)
285 KOG3545|consensus 27.9 4.3E+02 0.0094 23.4 11.8 141 82-239 77-238 (249)
286 PF10313 DUF2415: Uncharacteri 27.5 1.6E+02 0.0035 18.3 5.2 27 222-251 4-33 (43)
287 PF05935 Arylsulfotrans: Aryls 26.0 6.4E+02 0.014 24.7 17.6 116 186-303 157-310 (477)
288 PRK10115 protease 2; Provision 25.5 7.7E+02 0.017 25.6 33.6 237 37-301 134-401 (686)
289 PF14759 Reductase_C: Reductas 24.8 1.4E+02 0.003 21.4 4.0 27 191-217 2-28 (85)
290 PF14517 Tachylectin: Tachylec 24.6 4.8E+02 0.01 22.9 16.4 139 187-334 44-205 (229)
291 KOG0306|consensus 24.5 8.3E+02 0.018 25.6 22.0 224 42-294 425-664 (888)
292 KOG0274|consensus 24.1 7.4E+02 0.016 24.8 26.5 228 88-345 223-451 (537)
293 KOG2111|consensus 23.4 6E+02 0.013 23.5 22.3 114 177-295 135-257 (346)
294 PF03178 CPSF_A: CPSF A subuni 23.1 5.7E+02 0.012 23.2 11.8 61 42-102 99-160 (321)
295 KOG0271|consensus 22.8 6.7E+02 0.015 23.9 25.5 104 49-155 136-243 (480)
296 PF07009 DUF1312: Protein of u 22.6 3.5E+02 0.0076 20.5 6.2 53 36-90 21-75 (113)
297 PF14339 DUF4394: Domain of un 22.0 5.5E+02 0.012 22.6 19.4 161 177-342 28-220 (236)
298 KOG0301|consensus 21.7 9E+02 0.019 24.9 19.2 87 263-354 179-266 (745)
299 KOG0301|consensus 21.7 9E+02 0.019 24.9 17.9 76 71-155 141-216 (745)
300 KOG2321|consensus 21.6 8.5E+02 0.018 24.6 18.9 90 199-295 117-206 (703)
301 COG4590 ABC-type uncharacteriz 21.5 4.2E+02 0.009 26.0 7.3 67 186-257 326-392 (733)
302 KOG0288|consensus 21.4 7.3E+02 0.016 23.8 17.5 132 129-281 312-449 (459)
303 KOG1034|consensus 21.1 6.8E+02 0.015 23.3 11.2 104 40-147 104-211 (385)
304 KOG1310|consensus 20.5 6.5E+02 0.014 25.3 8.5 105 39-146 59-177 (758)
No 1
>KOG1214|consensus
Probab=100.00 E-value=4.3e-36 Score=285.67 Aligned_cols=243 Identities=35% Similarity=0.646 Sum_probs=219.3
Q ss_pred cCCEEEEEeCCCCeEEEEEcCCCCcce--eEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecC
Q psy13635 81 KKSMVCWTDHGTEMISCCTFDGNNVGS--KHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWED 158 (357)
Q Consensus 81 ~~~~ly~~d~~~~~I~~~~~~g~~~~~--~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~ 158 (357)
....|.++. ..+|.+..++|..... ..+++.-.-.-|.||++|...+++||+|.....|.+.++.|...+.++.++
T Consensus 989 ~gt~LL~aq--g~~I~~lplng~~~~K~~ak~~l~~p~~IiVGidfDC~e~mvyWtDv~g~SI~rasL~G~Ep~ti~n~~ 1066 (1289)
T KOG1214|consen 989 VGTFLLYAQ--GQQIGYLPLNGTRLQKDAAKTLLSLPGSIIVGIDFDCRERMVYWTDVAGRSISRASLEGAEPETIVNSG 1066 (1289)
T ss_pred CcceEEEec--cceEEEeecCcchhchhhhhceEecccceeeeeecccccceEEEeecCCCccccccccCCCCceeeccc
Confidence 355677764 3589999999987532 233455555679999999999999999999999999999999999998655
Q ss_pred CCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeC
Q psy13635 159 IDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDW 238 (357)
Q Consensus 159 ~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~ 238 (357)
+ ..|.||||||..+++||+|+..++|.++.+||+.+++++.++|-+|++|++|+.+|.|||+||
T Consensus 1067 L----------------~SPEGiAVDh~~Rn~ywtDS~lD~IevA~LdG~~rkvLf~tdLVNPR~iv~D~~rgnLYwtDW 1130 (1289)
T KOG1214|consen 1067 L----------------ISPEGIAVDHIRRNMYWTDSVLDKIEVALLDGSERKVLFYTDLVNPRAIVVDPIRGNLYWTDW 1130 (1289)
T ss_pred C----------------CCccceeeeeccceeeeeccccchhheeecCCceeeEEEeecccCcceEEeecccCceeeccc
Confidence 4 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCE
Q psy13635 239 NEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDY 318 (357)
Q Consensus 239 ~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ 318 (357)
...+.+|++.+|||+++++++.+.+..|+||++|++...|-|+|++++++..+.++|.+++.++ +.++.|++|.-++++
T Consensus 1131 nRenPkIets~mDG~NrRilin~DigLPNGLtfdpfs~~LCWvDAGt~rleC~~p~g~gRR~i~-~~LqYPF~itsy~~~ 1209 (1289)
T KOG1214|consen 1131 NRENPKIETSSMDGENRRILINTDIGLPNGLTFDPFSKLLCWVDAGTKRLECTLPDGTGRRVIQ-NNLQYPFSITSYADH 1209 (1289)
T ss_pred cccCCcceeeccCCccceEEeecccCCCCCceeCcccceeeEEecCCcceeEecCCCCcchhhh-hcccCceeeeecccc
Confidence 9888999999999999999999999999999999999999999999999999999999998665 589999999999999
Q ss_pred EEEEeCCCCeEEEEeCccCceeEE
Q psy13635 319 VYWTDWQRRSIDRVNKITGNDREV 342 (357)
Q Consensus 319 ly~td~~~~~I~~~~~~~g~~~~~ 342 (357)
+|||||+.++|..+++..++....
T Consensus 1210 fY~TDWk~n~vvsv~~~~~~~td~ 1233 (1289)
T KOG1214|consen 1210 FYHTDWKRNGVVSVNKHSGQFTDE 1233 (1289)
T ss_pred ceeeccccCceEEeeccccccccc
Confidence 999999999999999977765543
No 2
>KOG1214|consensus
Probab=100.00 E-value=1.2e-34 Score=275.81 Aligned_cols=266 Identities=29% Similarity=0.544 Sum_probs=226.7
Q ss_pred cCCCCeEEEEEeCCcEEEEEcCCCC-----cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 37 HHVAAQMLLFATSKDIRIANLSRPL-----KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 37 ~~~~~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
+....-+|+++....|.+..+.+.. ..+++.-...-++|||||..+.++||+|.....|.|.+++|.+ .+++
T Consensus 986 p~~~gt~LL~aqg~~I~~lplng~~~~K~~ak~~l~~p~~IiVGidfDC~e~mvyWtDv~g~SI~rasL~G~E---p~ti 1062 (1289)
T KOG1214|consen 986 PPSVGTFLLYAQGQQIGYLPLNGTRLQKDAAKTLLSLPGSIIVGIDFDCRERMVYWTDVAGRSISRASLEGAE---PETI 1062 (1289)
T ss_pred CCCCcceEEEeccceEEEeecCcchhchhhhhceEecccceeeeeecccccceEEEeecCCCccccccccCCC---Ccee
Confidence 3445568999999999998887732 2233444555689999999999999999999999999999984 6888
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEE
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLY 191 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY 191 (357)
+..++.+|+||||||.++++||+|+...+|.++.+||+.+++++..++. .|.+|++|+..++||
T Consensus 1063 ~n~~L~SPEGiAVDh~~Rn~ywtDS~lD~IevA~LdG~~rkvLf~tdLV----------------NPR~iv~D~~rgnLY 1126 (1289)
T KOG1214|consen 1063 VNSGLISPEGIAVDHIRRNMYWTDSVLDKIEVALLDGSERKVLFYTDLV----------------NPRAIVVDPIRGNLY 1126 (1289)
T ss_pred ecccCCCccceeeeeccceeeeeccccchhheeecCCceeeEEEeeccc----------------CcceEEeecccCcee
Confidence 9999999999999999999999999999999999999999999977765 566677899999999
Q ss_pred EEeCCCC--eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEE
Q psy13635 192 WTDTGTD--RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGI 269 (357)
Q Consensus 192 ~td~~~~--~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gi 269 (357)
|+|+... +|.+.++||+++++++.+++.-|+||++||....|.|+|.+++ +++....+|..++++. ++|++|.+|
T Consensus 1127 wtDWnRenPkIets~mDG~NrRilin~DigLPNGLtfdpfs~~LCWvDAGt~--rleC~~p~g~gRR~i~-~~LqYPF~i 1203 (1289)
T KOG1214|consen 1127 WTDWNRENPKIETSSMDGENRRILINTDIGLPNGLTFDPFSKLLCWVDAGTK--RLECTLPDGTGRRVIQ-NNLQYPFSI 1203 (1289)
T ss_pred eccccccCCcceeeccCCccceEEeecccCCCCCceeCcccceeeEEecCCc--ceeEecCCCCcchhhh-hcccCceee
Confidence 9999864 8999999999999999999999999999999999999999965 9999999999999887 679999999
Q ss_pred EEecCCCEEEEEeCCCCeEEEEeCCCCCe-EEEecCCCCceEEEEEE-----CCEEEEEeCCC
Q psy13635 270 TLDVDNEKLYWCDAKTDKIEMIDFDGNNR-RELINENLPHVFGISLL-----GDYVYWTDWQR 326 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~~I~~~~~dG~~~-~~i~~~~~~~p~gia~~-----~~~ly~td~~~ 326 (357)
+-+ ++++||+|++.++|.++++.+..- ...+..+..+.+||... .+.-|.++-+.
T Consensus 1204 tsy--~~~fY~TDWk~n~vvsv~~~~~~~td~~~p~~~s~lyGItav~~~Cp~gstpCSedNG 1264 (1289)
T KOG1214|consen 1204 TSY--ADHFYHTDWKRNGVVSVNKHSGQFTDEYLPEQRSHLYGITAVYPYCPTGSTPCSEDNG 1264 (1289)
T ss_pred eec--cccceeeccccCceEEeeccccccccccccccccceEEEEeccccCCCCCCcccccCC
Confidence 975 666999999999999999976544 33444556678888653 35555555443
No 3
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.95 E-value=2.2e-24 Score=225.27 Aligned_cols=264 Identities=20% Similarity=0.241 Sum_probs=202.7
Q ss_pred eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC--------------CcCCceeEEEEcCCCeE
Q psy13635 66 IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN--------------GLITPDGLAIDWLTEKL 131 (357)
Q Consensus 66 ~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~--------------~~~~p~glavd~~~~~l 131 (357)
+...+..|.++++|..++.||++|..+++|.+++.+|.. ...+.. .+..|.||++|+.++.|
T Consensus 563 ~~s~l~~P~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~----i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~L 638 (1057)
T PLN02919 563 LTSPLKFPGKLAIDLLNNRLFISDSNHNRIVVTDLDGNF----IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLL 638 (1057)
T ss_pred ccccCCCCceEEEECCCCeEEEEECCCCeEEEEeCCCCE----EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEE
Confidence 345678899999999899999999999999999998863 222211 25689999999877889
Q ss_pred EEEeCCCCEEEEEEcCCCceEEEEecCCCC---cceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC
Q psy13635 132 YWTDSETNKLEVSSLDGKKRKVLYWEDIDQ---PRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT 208 (357)
Q Consensus 132 y~td~~~~~I~~~~~~g~~~~~~~~~~~~~---p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~ 208 (357)
|++|..+++|+++++.+....++...+... ..+... ....++.|.++++|+.++.||+++.++++|.+++..+.
T Consensus 639 YVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~---~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g 715 (1057)
T PLN02919 639 YVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKG---TSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDG 715 (1057)
T ss_pred EEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhh---hHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCC
Confidence 999999999999999887776665432110 000000 01236789999999889999999999999999998655
Q ss_pred ceEEEec--------------CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee--------------
Q psy13635 209 HRKVLVN--------------TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-------------- 260 (357)
Q Consensus 209 ~~~~~~~--------------~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-------------- 260 (357)
....+.. ..+..|.||+++|.++.||++|... ++|.++++++.....+..
T Consensus 716 ~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n--~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~ 793 (1057)
T PLN02919 716 VTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSES--SSIRALDLKTGGSRLLAGGDPTFSDNLFKFGD 793 (1057)
T ss_pred eEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCC--CeEEEEECCCCcEEEEEecccccCcccccccC
Confidence 4433321 1356899999999877899999985 599999987554333221
Q ss_pred -------CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec-------------CCCCceEEEEEE-CCEE
Q psy13635 261 -------DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN-------------ENLPHVFGISLL-GDYV 319 (357)
Q Consensus 261 -------~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~-------------~~~~~p~gia~~-~~~l 319 (357)
..+..|.|+++| .+|.||++|..+++|.+++.++.....+.. .++..|.||+++ +|.+
T Consensus 794 ~dG~g~~~~l~~P~Gvavd-~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~l 872 (1057)
T PLN02919 794 HDGVGSEVLLQHPLGVLCA-KDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRL 872 (1057)
T ss_pred CCCchhhhhccCCceeeEe-CCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCE
Confidence 125579999999 577899999999999999998765554432 235689999998 5899
Q ss_pred EEEeCCCCeEEEEeCccCce
Q psy13635 320 YWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 320 y~td~~~~~I~~~~~~~g~~ 339 (357)
|++|..+++|++++..+++.
T Consensus 873 yVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 873 FVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEECCCCEEEEEECCCCcc
Confidence 99999999999999877664
No 4
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.91 E-value=1.5e-21 Score=204.01 Aligned_cols=227 Identities=21% Similarity=0.313 Sum_probs=174.2
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCc-ceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQP-RAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p-~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
++..++..|.++|+|..++.||++|..+++|++++.+|.....+...+.... -+- +....++.|.||++|+.++.
T Consensus 562 ~~~s~l~~P~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~----~~~a~f~~P~GIavd~~gn~ 637 (1057)
T PLN02919 562 LLTSPLKFPGKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGS----FEDATFNRPQGLAYNAKKNL 637 (1057)
T ss_pred cccccCCCCceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCc----hhccccCCCcEEEEeCCCCE
Confidence 5567789999999998889999999999999999999987655543221100 000 01346789999999988889
Q ss_pred EEEEeCCCCeEEEEEcCCCceEEEecC----------------CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 190 LYWTDTGTDRIEVCRLEGTHRKVLVNT----------------DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~~~~~~~~----------------~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
|||+|..+++|+++++.+....++... .+..|.+++++|.++.||+++.+. ++|++.+..+.
T Consensus 638 LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~--~~I~v~d~~~g 715 (1057)
T PLN02919 638 LYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQ--HQIWEYNISDG 715 (1057)
T ss_pred EEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCC--CeEEEEECCCC
Confidence 999999999999999887766655321 156899999999889999999985 59999987655
Q ss_pred ceEEEee--------------CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec----------------
Q psy13635 254 ERVLLVK--------------DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN---------------- 303 (357)
Q Consensus 254 ~~~~~~~--------------~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~---------------- 303 (357)
....+.. ..+..|.||++++.++.||++|..+++|+++++++.....+..
T Consensus 716 ~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~d 795 (1057)
T PLN02919 716 VTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHD 795 (1057)
T ss_pred eEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCC
Confidence 4433221 1356899999998888899999999999999987544332221
Q ss_pred -----CCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 304 -----ENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 304 -----~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
..+.+|.|++++ +|.+|++|+.+++|.+++..++...++.
T Consensus 796 G~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tia 841 (1057)
T PLN02919 796 GVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLA 841 (1057)
T ss_pred CchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEe
Confidence 125689999998 5889999999999999998656555443
No 5
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.91 E-value=4.5e-21 Score=171.02 Aligned_cols=226 Identities=27% Similarity=0.328 Sum_probs=170.5
Q ss_pred EEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceE
Q psy13635 73 GAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK 152 (357)
Q Consensus 73 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~ 152 (357)
+.|+.+++.++.|||+|...+.|++++.++.. ..+...+ .|.|++++..++.+|+++... +.++++.....+
T Consensus 2 ~Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~----~~~~~~~--~~~G~~~~~~~g~l~v~~~~~--~~~~d~~~g~~~ 73 (246)
T PF08450_consen 2 GEGPVWDPRDGRLYWVDIPGGRIYRVDPDTGE----VEVIDLP--GPNGMAFDRPDGRLYVADSGG--IAVVDPDTGKVT 73 (246)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTTE----EEEEESS--SEEEEEEECTTSEEEEEETTC--EEEEETTTTEEE
T ss_pred CcceEEECCCCEEEEEEcCCCEEEEEECCCCe----EEEEecC--CCceEEEEccCCEEEEEEcCc--eEEEecCCCcEE
Confidence 56889999899999999999999999999874 3333322 299999996689999999654 444487766666
Q ss_pred EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC--------CeEEEEEcCCCceEEEecCCCCCceEE
Q psy13635 153 VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT--------DRIEVCRLEGTHRKVLVNTDLVEPRAI 224 (357)
Q Consensus 153 ~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~--------~~I~~~~~~g~~~~~~~~~~~~~P~gi 224 (357)
.+...... ...+..|+++++|+ .|+||+++... ++|++++.+|+ ...+. ..+..|+||
T Consensus 74 ~~~~~~~~-----------~~~~~~~ND~~vd~-~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~-~~~~~-~~~~~pNGi 139 (246)
T PF08450_consen 74 VLADLPDG-----------GVPFNRPNDVAVDP-DGNLYVTDSGGGGASGIDPGSVYRIDPDGK-VTVVA-DGLGFPNGI 139 (246)
T ss_dssp EEEEEETT-----------CSCTEEEEEEEE-T-TS-EEEEEECCBCTTCGGSEEEEEEETTSE-EEEEE-EEESSEEEE
T ss_pred EEeeccCC-----------CcccCCCceEEEcC-CCCEEEEecCCCccccccccceEEECCCCe-EEEEe-cCcccccce
Confidence 65543110 12456899999996 57799999765 46999999954 33333 368899999
Q ss_pred EEeCCCCEEEEEeCCCCCCeEEEEecCCCc-----eEEEeeC--CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 225 TLSPAHGYLFWSDWNEKRPKIERSLLNGGE-----RVLLVKD--RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 225 avd~~~g~Ly~~d~~~~~~~I~~~~~dg~~-----~~~~~~~--~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
+++|.+..||+++... ++|++++++... .+.+... ....|.|+++| .+|+||+++...++|.+++++|..
T Consensus 140 ~~s~dg~~lyv~ds~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD-~~G~l~va~~~~~~I~~~~p~G~~ 216 (246)
T PF08450_consen 140 AFSPDGKTLYVADSFN--GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVD-SDGNLWVADWGGGRIVVFDPDGKL 216 (246)
T ss_dssp EEETTSSEEEEEETTT--TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEB-TTS-EEEEEETTTEEEEEETTSCE
T ss_pred EECCcchheeeccccc--ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEc-CCCCEEEEEcCCCEEEEECCCccE
Confidence 9999988999999995 599999997432 2334332 22369999999 689999999999999999999887
Q ss_pred eEEEecCCCCceEEEEEE---CCEEEEEeC
Q psy13635 298 RRELINENLPHVFGISLL---GDYVYWTDW 324 (357)
Q Consensus 298 ~~~i~~~~~~~p~gia~~---~~~ly~td~ 324 (357)
...+.. ...+|..+++. .+.||+|..
T Consensus 217 ~~~i~~-p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 217 LREIEL-PVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp EEEEE--SSSSEEEEEEESTTSSEEEEEEB
T ss_pred EEEEcC-CCCCEEEEEEECCCCCEEEEEeC
Confidence 765554 36699999995 378999863
No 6
>KOG1215|consensus
Probab=99.90 E-value=4.9e-22 Score=206.78 Aligned_cols=257 Identities=39% Similarity=0.784 Sum_probs=209.7
Q ss_pred EeecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe
Q psy13635 34 ALSHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
|.+.....+++.++++++++++.++.. ....+.+....+.++++++.++.+||+|.....|.+...++.. ...+..
T Consensus 401 c~~~~~~~~~l~~s~~~~ir~~~~~~~-~~~~p~~~~~~~~~~d~d~~~~~i~~~d~~~~~i~~~~~~~~~---~~~~~~ 476 (877)
T KOG1215|consen 401 CEASDQPEAFLLFSNRHDIRRISLDCS-DVSRPLEGIKNAVALDFDVLNNRIYWADLSDEKICRASQDGSS---ECELCG 476 (877)
T ss_pred ceecCCCCcEEEEecCccceecccCCC-cceEEccCCccceEEEEEecCCEEEEEeccCCeEeeeccCCCc---cceEec
Confidence 446666899999999999999999874 6677777778999999999999999999999999999999885 122344
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
.+...| .|+|+||..+++||+
T Consensus 477 ~g~~~~-----------------------------------------------------------~~lavD~~~~~~y~t 497 (877)
T KOG1215|consen 477 DGLCIP-----------------------------------------------------------EGLAVDWIGDNIYWT 497 (877)
T ss_pred cCcccc-----------------------------------------------------------CcEEEEeccCCceec
Confidence 444444 445555555556666
Q ss_pred eCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEec
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDV 273 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~ 273 (357)
|.....|.+.+++|..+.+++...+..|+.++++|..|.+||+|++.. .+|.|+.+||..+..++..++.+|+|+++|.
T Consensus 498 De~~~~i~v~~~~g~~~~vl~~~~l~~~r~~~v~p~~g~~~wtd~~~~-~~i~ra~~dg~~~~~l~~~~~~~p~glt~d~ 576 (877)
T KOG1215|consen 498 DEGNCLIEVADLDGSSRKVLVSKDLDLPRSIAVDPEKGLMFWTDWGQP-PRIERASLDGSERAVLVTNGILWPNGLTIDY 576 (877)
T ss_pred ccCCceeEEEEccCCceeEEEecCCCCccceeeccccCeeEEecCCCC-chhhhhcCCCCCceEEEeCCccCCCcceEEe
Confidence 666666666667777777777777789999999999999999999964 5999999999999999998899999999999
Q ss_pred CCCEEEEEeCCCC-eEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEecccCCcee
Q psy13635 274 DNEKLYWCDAKTD-KIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVT 352 (357)
Q Consensus 274 ~~~~lY~~d~~~~-~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~ 352 (357)
..+++||+|.... .|.+++.+|..++........+|++++++++++||+++....+.+..+..+.....+..++..|++
T Consensus 577 ~~~~~yw~d~~~~~~i~~~~~~g~~r~~~~~~~~~~p~~~~~~~~~iyw~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (877)
T KOG1215|consen 577 ETDRLYWADAKLDYTIESANMDGQNRRVVDSEDLPHPFGLSVFEDYIYWTDWSNRAISRAEKHKGSDSRTSRSNLAQPLD 656 (877)
T ss_pred ecceeEEEcccCCcceeeeecCCCceEEeccccCCCceEEEEecceeEEeeccccceEeeecccCCcceeeecccCcccc
Confidence 9999999999998 799999999998755556899999999999999999999988888887666551244555566665
Q ss_pred ee
Q psy13635 353 RR 354 (357)
Q Consensus 353 i~ 354 (357)
+.
T Consensus 657 ~~ 658 (877)
T KOG1215|consen 657 II 658 (877)
T ss_pred eE
Confidence 43
No 7
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.90 E-value=5.2e-21 Score=170.63 Aligned_cols=211 Identities=24% Similarity=0.353 Sum_probs=164.2
Q ss_pred ceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC
Q psy13635 119 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD 198 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~ 198 (357)
|+|+++|+.++.|||+|..+++|+++++++...+.+. ...|.|++++..+++||+++...
T Consensus 2 ~Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~-------------------~~~~~G~~~~~~~g~l~v~~~~~- 61 (246)
T PF08450_consen 2 GEGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVID-------------------LPGPNGMAFDRPDGRLYVADSGG- 61 (246)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE-------------------SSSEEEEEEECTTSEEEEEETTC-
T ss_pred CcceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEe-------------------cCCCceEEEEccCCEEEEEEcCc-
Confidence 7999999889999999999999999999988766542 12499999997779999999854
Q ss_pred eEEEEEcCCCceEEEecC-----CCCCceEEEEeCCCCEEEEEeCCCCC------CeEEEEecCCCceEEEeeCCCCCce
Q psy13635 199 RIEVCRLEGTHRKVLVNT-----DLVEPRAITLSPAHGYLFWSDWNEKR------PKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 199 ~I~~~~~~g~~~~~~~~~-----~~~~P~giavd~~~g~Ly~~d~~~~~------~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
+.+.++.....+.+... .+..|+++++|+. |+||+++..... ++|++.+.++. ...+ ...+..|+
T Consensus 62 -~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~-G~ly~t~~~~~~~~~~~~g~v~~~~~~~~-~~~~-~~~~~~pN 137 (246)
T PF08450_consen 62 -IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPD-GNLYVTDSGGGGASGIDPGSVYRIDPDGK-VTVV-ADGLGFPN 137 (246)
T ss_dssp -EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TT-S-EEEEEECCBCTTCGGSEEEEEEETTSE-EEEE-EEEESSEE
T ss_pred -eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCC-CCEEEEecCCCccccccccceEEECCCCe-EEEE-ecCccccc
Confidence 44458776655555543 5678999999985 899999976431 57999999933 3333 35689999
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCC-----eEEEec--CCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCce
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNN-----RRELIN--ENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~-----~~~i~~--~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~ 339 (357)
||++++.+..||++|+..++|++++++... ++.+.. .....|.|++++ +|+||++++.+++|+++++ +|+.
T Consensus 138 Gi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p-~G~~ 216 (246)
T PF08450_consen 138 GIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDP-DGKL 216 (246)
T ss_dssp EEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEET-TSCE
T ss_pred ceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECC-CccE
Confidence 999999888999999999999999986432 233322 122369999999 6999999999999999999 5999
Q ss_pred eEEEecccCCceeee
Q psy13635 340 REVIIERSCTGVTRR 354 (357)
Q Consensus 340 ~~~i~~~l~~p~~i~ 354 (357)
...|..+...|..+.
T Consensus 217 ~~~i~~p~~~~t~~~ 231 (246)
T PF08450_consen 217 LREIELPVPRPTNCA 231 (246)
T ss_dssp EEEEE-SSSSEEEEE
T ss_pred EEEEcCCCCCEEEEE
Confidence 988888777777654
No 8
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.78 E-value=5.7e-15 Score=138.14 Aligned_cols=297 Identities=17% Similarity=0.176 Sum_probs=199.1
Q ss_pred CcEEEEEcCC-CCcceEe--ccCCCcEEEEEEEccCCEEEEEeCC---CCeEEEEEcCCC-CcceeEEEEeCCcCCceeE
Q psy13635 50 KDIRIANLSR-PLKPVTI--IKDLEEGAAIDYYYKKSMVCWTDHG---TEMISCCTFDGN-NVGSKHNVITNGLITPDGL 122 (357)
Q Consensus 50 ~~i~~~~~~~-~~~~~~~--~~~~~~~~~i~~d~~~~~ly~~d~~---~~~I~~~~~~g~-~~~~~~~~~~~~~~~p~gl 122 (357)
..|..+.++. +.+.+.+ .....+|.-+++++.++.||.++.. .+.|..+.++.. ............-..|..+
T Consensus 13 ~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i 92 (345)
T PF10282_consen 13 GGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHI 92 (345)
T ss_dssp TEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEE
T ss_pred CcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEE
Confidence 3566555522 1233322 3467789999999999999999884 677777666643 1111122223245689999
Q ss_pred EEEcCCCeEEEEeCCCCEEEEEEcCC--CceEEE--Ee-cCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 123 AIDWLTEKLYWTDSETNKLEVSSLDG--KKRKVL--YW-EDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 123 avd~~~~~ly~td~~~~~I~~~~~~g--~~~~~~--~~-~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
++|+.++.||+++...+.|.+++++. ...... .. .+. .|.. ..+...+|..+.++|.++.+|++|.+.
T Consensus 93 ~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~-g~~~------~rq~~~h~H~v~~~pdg~~v~v~dlG~ 165 (345)
T PF10282_consen 93 AVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGS-GPNP------DRQEGPHPHQVVFSPDGRFVYVPDLGA 165 (345)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEE-ESST------TTTSSTCEEEEEE-TTSSEEEEEETTT
T ss_pred EEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCC-CCcc------cccccccceeEEECCCCCEEEEEecCC
Confidence 99999999999999999999888764 333321 11 010 0000 012335889999999999999999999
Q ss_pred CeEEEEEcCCCc--e---EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC--CCceEEE--ee---C---C
Q psy13635 198 DRIEVCRLEGTH--R---KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN--GGERVLL--VK---D---R 262 (357)
Q Consensus 198 ~~I~~~~~~g~~--~---~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d--g~~~~~~--~~---~---~ 262 (357)
++|.+++.+... . ..+.......|+.++++|...++|+++... ..|..++.+ ....+.+ +. . +
T Consensus 166 D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s--~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 243 (345)
T PF10282_consen 166 DRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELS--NTVSVFDYDPSDGSLTEIQTISTLPEGFTG 243 (345)
T ss_dssp TEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTT--TEEEEEEEETTTTEEEEEEEEESCETTSCS
T ss_pred CEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCC--CcEEEEeecccCCceeEEEEeeeccccccc
Confidence 999999987544 2 122223457899999999988999999885 488888887 2222221 11 1 1
Q ss_pred CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC--CeEEE--ecCCCCceEEEEEE--CCEEEEEeCCCCeEEEE--eC
Q psy13635 263 LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN--NRREL--INENLPHVFGISLL--GDYVYWTDWQRRSIDRV--NK 334 (357)
Q Consensus 263 l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~--~~~~i--~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~--~~ 334 (357)
...|.+|++++++..||+++.+.+.|..++++.. ..+.+ +.....+|.+++++ +.+||+++..++.|..+ +.
T Consensus 244 ~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~ 323 (345)
T PF10282_consen 244 ENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDP 323 (345)
T ss_dssp SSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred cCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence 2379999999999999999999999999998543 22222 22246679999995 68999999999998765 55
Q ss_pred ccCceeEEE-ecccCCceeeee
Q psy13635 335 ITGNDREVI-IERSCTGVTRRR 355 (357)
Q Consensus 335 ~~g~~~~~i-~~~l~~p~~i~~ 355 (357)
.+|+....- ...+..|+-|.+
T Consensus 324 ~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 324 DTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp TTTEEEEEEEEEESSSEEEEEE
T ss_pred CCCcEEEecccccCCCCEEEeC
Confidence 566655544 246778876653
No 9
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.75 E-value=2.2e-14 Score=133.55 Aligned_cols=293 Identities=15% Similarity=0.124 Sum_probs=190.4
Q ss_pred EEEEe--CCcEEEEEcCCCCcce--EeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc
Q psy13635 44 LLFAT--SKDIRIANLSRPLKPV--TIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP 119 (357)
Q Consensus 44 l~~~~--~~~i~~~~~~~~~~~~--~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p 119 (357)
+|+++ .+.|..++++...+.+ ...+....|..++++++...||++....+.|..+++++.......... .....|
T Consensus 4 ~y~~~~~~~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~-~~~~~p 82 (330)
T PRK11028 4 VYIASPESQQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES-PLPGSP 82 (330)
T ss_pred EEEEcCCCCCEEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee-cCCCCc
Confidence 44443 4568878875322222 223344678899999988999999887888877776532210111111 122479
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcC--CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLD--GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~--g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
.++++++.++.||.++...+.|..++++ |...+.+.. ......|.++++++.++.+|+++.+.
T Consensus 83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~---------------~~~~~~~~~~~~~p~g~~l~v~~~~~ 147 (330)
T PRK11028 83 THISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQI---------------IEGLEGCHSANIDPDNRTLWVPCLKE 147 (330)
T ss_pred eEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceee---------------ccCCCcccEeEeCCCCCEEEEeeCCC
Confidence 9999999999999999888999888775 322221110 01123689999999999999999999
Q ss_pred CeEEEEEcCCCc-eE-----EEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC--CceEEEee-----C---
Q psy13635 198 DRIEVCRLEGTH-RK-----VLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG--GERVLLVK-----D--- 261 (357)
Q Consensus 198 ~~I~~~~~~g~~-~~-----~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg--~~~~~~~~-----~--- 261 (357)
++|.+.+++... .. .........|++++++|...++|+++... +.|...+++. ...+.+.. .
T Consensus 148 ~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~--~~v~v~~~~~~~~~~~~~~~~~~~p~~~~ 225 (330)
T PRK11028 148 DRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELN--SSVDVWQLKDPHGEIECVQTLDMMPADFS 225 (330)
T ss_pred CEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCC--CEEEEEEEeCCCCCEEEEEEEecCCCcCC
Confidence 999999886421 11 11111236799999999988999999874 4888777762 22222111 1
Q ss_pred CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC--CCCeEEEec-CCCCceEEEEEE--CCEEEEEeCCCCeEEEE--eC
Q psy13635 262 RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD--GNNRRELIN-ENLPHVFGISLL--GDYVYWTDWQRRSIDRV--NK 334 (357)
Q Consensus 262 ~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d--G~~~~~i~~-~~~~~p~gia~~--~~~ly~td~~~~~I~~~--~~ 334 (357)
...+|.++++++.+.+||+++...+.|..++.+ +...+.+.. .....|.++++. +.+||+++...+.|..+ +.
T Consensus 226 ~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 226 DTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred CCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence 123456799998888999999888889888764 332221111 113477888875 67999999888877665 44
Q ss_pred ccCce--eEEEecccCCceeeee
Q psy13635 335 ITGND--REVIIERSCTGVTRRR 355 (357)
Q Consensus 335 ~~g~~--~~~i~~~l~~p~~i~~ 355 (357)
.+|.. ...+.. ...|+.+..
T Consensus 306 ~~g~l~~~~~~~~-g~~P~~~~~ 327 (330)
T PRK11028 306 ETGLLTELGRYAV-GQGPMWVSV 327 (330)
T ss_pred CCCcEEEcccccc-CCCceEEEE
Confidence 44542 222333 567877753
No 10
>KOG4659|consensus
Probab=99.75 E-value=8.2e-16 Score=153.80 Aligned_cols=244 Identities=17% Similarity=0.236 Sum_probs=173.5
Q ss_pred CCeEEEEEeCCcEEEEEcCCCCcceE--eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEc-CCCCcceeEEEEe-C-
Q psy13635 40 AAQMLLFATSKDIRIANLSRPLKPVT--IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTF-DGNNVGSKHNVIT-N- 114 (357)
Q Consensus 40 ~~~~l~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~~~~~~~-~- 114 (357)
+...|++.+.+-|+||-.+|.....+ -..+..+-.-|+++|.++.||++|..+.+|+|+.- ++.......+++. .
T Consensus 374 ~DGSl~VGDfNyIRRI~~dg~v~tIl~L~~t~~sh~Yy~AvsPvdgtlyvSdp~s~qv~rv~sl~~~d~~~N~evvaG~G 453 (1899)
T KOG4659|consen 374 PDGSLIVGDFNYIRRISQDGQVSTILTLGLTDTSHSYYIAVSPVDGTLYVSDPLSKQVWRVSSLEPQDSRNNYEVVAGDG 453 (1899)
T ss_pred CCCcEEEccchheeeecCCCceEEEEEecCCCccceeEEEecCcCceEEecCCCcceEEEeccCCccccccCeeEEeccC
Confidence 34458899999999999988432222 22466677889999999999999999999999753 3322211222221 1
Q ss_pred -------------------CcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeee---eccCc
Q psy13635 115 -------------------GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIAS---YKLPT 172 (357)
Q Consensus 115 -------------------~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~---~~~~~ 172 (357)
.+..|.|||+| ..+.||++|. ..|.+++.+|-....+...+.. -+.+.+ |++..
T Consensus 454 e~Clp~desCGDGalA~dA~L~~PkGIa~d-k~g~lYfaD~--t~IR~iD~~giIstlig~~~~~-~~p~~C~~~~kl~~ 529 (1899)
T KOG4659|consen 454 EVCLPADESCGDGALAQDAQLIFPKGIAFD-KMGNLYFADG--TRIRVIDTTGIISTLIGTTPDQ-HPPRTCAQITKLVD 529 (1899)
T ss_pred cCccccccccCcchhcccceeccCCceeEc-cCCcEEEecc--cEEEEeccCceEEEeccCCCCc-cCccccccccchhh
Confidence 26789999999 6899999995 4899999999877776655443 233333 45556
Q ss_pred ccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec-------------------CCCCCceEEEEeCCCCEE
Q psy13635 173 IEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN-------------------TDLVEPRAITLSPAHGYL 233 (357)
Q Consensus 173 ~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~-------------------~~~~~P~giavd~~~g~L 233 (357)
-++.||..|||||.++.||+-|. +.|.+++.++..+..+.. ..+..|.+||+.+. |.|
T Consensus 530 ~~leWPT~LaV~Pmdnsl~Vld~--nvvlrit~~~rV~Ii~GrP~hC~~a~~t~~~skla~H~tl~~~r~Iavg~~-G~l 606 (1899)
T KOG4659|consen 530 LQLEWPTSLAVDPMDNSLLVLDT--NVVLRITVVHRVRIILGRPTHCDLANATSSASKLADHRTLLIQRDIAVGTD-GAL 606 (1899)
T ss_pred eeeecccceeecCCCCeEEEeec--ceEEEEccCccEEEEcCCccccccCCCchhhhhhhhhhhhhhhhceeecCC-ceE
Confidence 68899999999999999999997 567787777665422111 12457899999974 999
Q ss_pred EEEeCCCC-CCeEEEEecCCCceEEEe-------------------------eCCCCCceEEEEecCCCEEEEEeCCCCe
Q psy13635 234 FWSDWNEK-RPKIERSLLNGGERVLLV-------------------------KDRLGWPNGITLDVDNEKLYWCDAKTDK 287 (357)
Q Consensus 234 y~~d~~~~-~~~I~~~~~dg~~~~~~~-------------------------~~~l~~P~giaid~~~~~lY~~d~~~~~ 287 (357)
|++++.+. -.+|.++..||+- ..+. ...++.|.++|+. .+|.+|++|.++-+
T Consensus 607 yvaEsD~rriNrvr~~~tdg~i-~ilaGa~S~C~C~~~~~cdcfs~~~~~At~A~lnsp~alaVs-Pdg~v~IAD~gN~r 684 (1899)
T KOG4659|consen 607 YVAESDGRRINRVRKLSTDGTI-SILAGAKSPCSCDVAACCDCFSLRDVAATQAKLNSPYALAVS-PDGDVIIADSGNSR 684 (1899)
T ss_pred EEEeccchhhhheEEeccCceE-EEecCCCCCCCcccccCCccccccchhhhccccCCcceEEEC-CCCcEEEecCCchh
Confidence 99998854 2244444455521 1111 1136789999998 68899999999998
Q ss_pred EEEEe
Q psy13635 288 IEMID 292 (357)
Q Consensus 288 I~~~~ 292 (357)
|..+.
T Consensus 685 Ir~Vs 689 (1899)
T KOG4659|consen 685 IRKVS 689 (1899)
T ss_pred hhhhh
Confidence 87764
No 11
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=99.73 E-value=5.5e-15 Score=134.28 Aligned_cols=235 Identities=18% Similarity=0.222 Sum_probs=168.4
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
......+..+++.++.|||+|+..+.|.+.+..... ..+....-..+.+..+| ..+.|..++.+...+.. -.|
T Consensus 23 ~~~~gEgP~w~~~~~~L~w~DI~~~~i~r~~~~~g~----~~~~~~p~~~~~~~~~d-~~g~Lv~~~~g~~~~~~--~~~ 95 (307)
T COG3386 23 GATLGEGPVWDPDRGALLWVDILGGRIHRLDPETGK----KRVFPSPGGFSSGALID-AGGRLIACEHGVRLLDP--DTG 95 (307)
T ss_pred ccccccCccCcCCCCEEEEEeCCCCeEEEecCCcCc----eEEEECCCCcccceeec-CCCeEEEEccccEEEec--cCC
Confidence 333455667889999999999999999999997443 44444444458888898 57888888765433333 223
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-----C------CeEEEEEcCCCceEEEecCC
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-----T------DRIEVCRLEGTHRKVLVNTD 217 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-----~------~~I~~~~~~g~~~~~~~~~~ 217 (357)
...+.+.... .....+.|++..+|+ .|++|+++.. . +++++++++|...+.+. ..
T Consensus 96 ~~~t~~~~~~------------~~~~~~r~ND~~v~p-dG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~-~~ 161 (307)
T COG3386 96 GKITLLAEPE------------DGLPLNRPNDGVVDP-DGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLD-DD 161 (307)
T ss_pred ceeEEecccc------------CCCCcCCCCceeEcC-CCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeec-Cc
Confidence 3323332221 133457899999995 5899999988 2 37999998776655443 45
Q ss_pred CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC---CC--ceE--EEeeCCCCCceEEEEecCCCEEE-EEeCCCCeEE
Q psy13635 218 LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN---GG--ERV--LLVKDRLGWPNGITLDVDNEKLY-WCDAKTDKIE 289 (357)
Q Consensus 218 ~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d---g~--~~~--~~~~~~l~~P~giaid~~~~~lY-~~d~~~~~I~ 289 (357)
+..|+||+++|.+..||++|+.. .+|+++.++ |. ++. ......-..|.|+++| .+|+|| .+..+.++|.
T Consensus 162 ~~~~NGla~SpDg~tly~aDT~~--~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vD-adG~lw~~a~~~g~~v~ 238 (307)
T COG3386 162 LTIPNGLAFSPDGKTLYVADTPA--NRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVD-ADGNLWVAAVWGGGRVV 238 (307)
T ss_pred EEecCceEECCCCCEEEEEeCCC--CeEEEEecCcccCccCCcceEEEccCCCCCCCceEEe-CCCCEEEecccCCceEE
Confidence 88999999999988999999985 599999987 21 112 2222334789999999 789998 4444445999
Q ss_pred EEeCCCCCeEEEecCCCCceEEEEEEC---CEEEEEeCCCCe
Q psy13635 290 MIDFDGNNRRELINENLPHVFGISLLG---DYVYWTDWQRRS 328 (357)
Q Consensus 290 ~~~~dG~~~~~i~~~~~~~p~gia~~~---~~ly~td~~~~~ 328 (357)
+++++|.....+.. ....|..+++-+ +.||+|....+.
T Consensus 239 ~~~pdG~l~~~i~l-P~~~~t~~~FgG~~~~~L~iTs~~~~~ 279 (307)
T COG3386 239 RFNPDGKLLGEIKL-PVKRPTNPAFGGPDLNTLYITSARSGM 279 (307)
T ss_pred EECCCCcEEEEEEC-CCCCCccceEeCCCcCEEEEEecCCCC
Confidence 99999877765543 336788888875 899999877633
No 12
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=99.66 E-value=7.7e-13 Score=125.19 Aligned_cols=269 Identities=16% Similarity=0.173 Sum_probs=197.9
Q ss_pred EEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeE
Q psy13635 52 IRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKL 131 (357)
Q Consensus 52 i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~l 131 (357)
+..++..+ ......+.....|.++.+.+....+|+++...+.+..++.. .. ........+...|.++++++.+.++
T Consensus 13 ~~v~~~~~-~~~~~~~~~~~~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~-~n--~~~~~~~~g~~~p~~i~v~~~~~~v 88 (381)
T COG3391 13 VSVINTGT-NKVTAAISLGRGPGGVAVNPDGTQVYVANSGSNDVSVIDAT-SN--TVTQSLSVGGVYPAGVAVNPAGNKV 88 (381)
T ss_pred eEEEeecc-cEEEEEeecCCCCceeEEcCccCEEEEEeecCceeeecccc-cc--eeeeeccCCCccccceeeCCCCCeE
Confidence 44444433 34444445555899999999888999999887766666655 32 1122233444789999999999999
Q ss_pred EEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEEEcCCCc
Q psy13635 132 YWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCRLEGTH 209 (357)
Q Consensus 132 y~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~~~g~~ 209 (357)
|+++...+.|.+++............+ ..|.++++|+.++.+|+++.+ .++|.+++.....
T Consensus 89 yv~~~~~~~v~vid~~~~~~~~~~~vG-----------------~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~ 151 (381)
T COG3391 89 YVTTGDSNTVSVIDTATNTVLGSIPVG-----------------LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNK 151 (381)
T ss_pred EEecCCCCeEEEEcCcccceeeEeeec-----------------cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCe
Confidence 999999999999995544332222111 279999999999999999994 6899999988665
Q ss_pred eEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE-E---eeCCCCCceEEEEecCCCEEEEEeCCC
Q psy13635 210 RKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL-L---VKDRLGWPNGITLDVDNEKLYWCDAKT 285 (357)
Q Consensus 210 ~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~-~---~~~~l~~P~giaid~~~~~lY~~d~~~ 285 (357)
....... ...|.+++++|...++|+++... +.|..++..+..... - .-.....|.++++++.+.++|+++..+
T Consensus 152 ~~~~~~v-G~~P~~~a~~p~g~~vyv~~~~~--~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~ 228 (381)
T COG3391 152 VTATIPV-GNTPTGVAVDPDGNKVYVTNSDD--NTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGS 228 (381)
T ss_pred EEEEEec-CCCcceEEECCCCCeEEEEecCC--CeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccC
Confidence 5444432 24789999999988899999764 599999977765553 0 113457899999999999999999888
Q ss_pred --CeEEEEeCCCCCeEEE--ecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 286 --DKIEMIDFDGNNRREL--INENLPHVFGISLL--GDYVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 286 --~~I~~~~~dG~~~~~i--~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
+.+.+++......... ..+.+ .|.++++. +..+|+++...+.+..++..+.+....+..
T Consensus 229 ~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~ 293 (381)
T COG3391 229 GSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPT 293 (381)
T ss_pred CCceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecc
Confidence 6899998877665443 23345 78888886 688999998889999999866666555443
No 13
>KOG4659|consensus
Probab=99.65 E-value=1.2e-14 Score=145.75 Aligned_cols=245 Identities=21% Similarity=0.279 Sum_probs=176.4
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC---cCCceeEEEEcCCCeEEEEeCCCCEEEEEE
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG---LITPDGLAIDWLTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~---~~~p~glavd~~~~~ly~td~~~~~I~~~~ 145 (357)
.+-.|.++++.+ +|.||+.|. +-|+|+..+|.. .+++.=+ ...-.-||+||.++.||++|....+|+|+.
T Consensus 363 ~L~aPvala~a~-DGSl~VGDf--NyIRRI~~dg~v----~tIl~L~~t~~sh~Yy~AvsPvdgtlyvSdp~s~qv~rv~ 435 (1899)
T KOG4659|consen 363 SLFAPVALAYAP-DGSLIVGDF--NYIRRISQDGQV----STILTLGLTDTSHSYYIAVSPVDGTLYVSDPLSKQVWRVS 435 (1899)
T ss_pred eeeceeeEEEcC-CCcEEEccc--hheeeecCCCce----EEEEEecCCCccceeEEEecCcCceEEecCCCcceEEEec
Confidence 344799999987 789999987 479999999985 5555434 344567999999999999999999999985
Q ss_pred -cCCC----ceEEEEecC-C-------CCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEE
Q psy13635 146 -LDGK----KRKVLYWED-I-------DQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKV 212 (357)
Q Consensus 146 -~~g~----~~~~~~~~~-~-------~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~ 212 (357)
+.++ +-+++...+ . +.-.+.|. ..++..|.||||| ..|.||++|.. +|.++|.+|-....
T Consensus 436 sl~~~d~~~N~evvaG~Ge~Clp~desCGDGalA~----dA~L~~PkGIa~d-k~g~lYfaD~t--~IR~iD~~giIstl 508 (1899)
T KOG4659|consen 436 SLEPQDSRNNYEVVAGDGEVCLPADESCGDGALAQ----DAQLIFPKGIAFD-KMGNLYFADGT--RIRVIDTTGIISTL 508 (1899)
T ss_pred cCCccccccCeeEEeccCcCccccccccCcchhcc----cceeccCCceeEc-cCCcEEEeccc--EEEEeccCceEEEe
Confidence 3322 123333222 2 22233333 5677899999999 89999999985 79999888754433
Q ss_pred Eec------------------CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee--------------
Q psy13635 213 LVN------------------TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-------------- 260 (357)
Q Consensus 213 ~~~------------------~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-------------- 260 (357)
+.. -.++.|..+|++|.++.||+-|.. .|.++..++..+...-.
T Consensus 509 ig~~~~~~~p~~C~~~~kl~~~~leWPT~LaV~Pmdnsl~Vld~n----vvlrit~~~rV~Ii~GrP~hC~~a~~t~~~s 584 (1899)
T KOG4659|consen 509 IGTTPDQHPPRTCAQITKLVDLQLEWPTSLAVDPMDNSLLVLDTN----VVLRITVVHRVRIILGRPTHCDLANATSSAS 584 (1899)
T ss_pred ccCCCCccCccccccccchhheeeecccceeecCCCCeEEEeecc----eEEEEccCccEEEEcCCccccccCCCchhhh
Confidence 322 136799999999999999999965 88888887765421110
Q ss_pred -----CCCCCceEEEEecCCCEEEEEeCCCCeE---EEEeCCCCCeEEEec--------------------------CCC
Q psy13635 261 -----DRLGWPNGITLDVDNEKLYWCDAKTDKI---EMIDFDGNNRRELIN--------------------------ENL 306 (357)
Q Consensus 261 -----~~l~~P~giaid~~~~~lY~~d~~~~~I---~~~~~dG~~~~~i~~--------------------------~~~ 306 (357)
..+.-|..|++. ..|.||++++...+| +.+..||. ..++. ..+
T Consensus 585 kla~H~tl~~~r~Iavg-~~G~lyvaEsD~rriNrvr~~~tdg~--i~ilaGa~S~C~C~~~~~cdcfs~~~~~At~A~l 661 (1899)
T KOG4659|consen 585 KLADHRTLLIQRDIAVG-TDGALYVAESDGRRINRVRKLSTDGT--ISILAGAKSPCSCDVAACCDCFSLRDVAATQAKL 661 (1899)
T ss_pred hhhhhhhhhhhhceeec-CCceEEEEeccchhhhheEEeccCce--EEEecCCCCCCCcccccCCccccccchhhhcccc
Confidence 123347899998 689999999877554 44444552 11111 136
Q ss_pred CceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 307 PHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 307 ~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
..|.++|+. +|.+|++|.++-+|..+.+
T Consensus 662 nsp~alaVsPdg~v~IAD~gN~rIr~Vs~ 690 (1899)
T KOG4659|consen 662 NSPYALAVSPDGDVIIADSGNSRIRKVSA 690 (1899)
T ss_pred CCcceEEECCCCcEEEecCCchhhhhhhh
Confidence 789999998 6999999999988877654
No 14
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=99.64 E-value=9e-14 Score=126.34 Aligned_cols=217 Identities=21% Similarity=0.294 Sum_probs=156.1
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
..++..+..-.+|...++..+.|||+|...++|.+.++.....+++.... ..+.+..+| ..+
T Consensus 17 ~~~~~~~~~~gEgP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~p~-----------------~~~~~~~~d-~~g 78 (307)
T COG3386 17 VTLLDKGATLGEGPVWDPDRGALLWVDILGGRIHRLDPETGKKRVFPSPG-----------------GFSSGALID-AGG 78 (307)
T ss_pred eeEeecccccccCccCcCCCCEEEEEeCCCCeEEEecCCcCceEEEECCC-----------------Ccccceeec-CCC
Confidence 45566667778999999999999999999999999999754444443221 237788888 677
Q ss_pred eEEEEeCCCCeEEEEEcCCCceEEEecC----CCCCceEEEEeCCCCEEEEEeCC-----C----CCCeEEEEecCCCce
Q psy13635 189 NLYWTDTGTDRIEVCRLEGTHRKVLVNT----DLVEPRAITLSPAHGYLFWSDWN-----E----KRPKIERSLLNGGER 255 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g~~~~~~~~~----~~~~P~giavd~~~g~Ly~~d~~-----~----~~~~I~~~~~dg~~~ 255 (357)
+|..++.+...+.. ..|...+.+... ....|+...++|. |.+|+++.. . ..+.++|++.+|...
T Consensus 79 ~Lv~~~~g~~~~~~--~~~~~~t~~~~~~~~~~~~r~ND~~v~pd-G~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~ 155 (307)
T COG3386 79 RLIACEHGVRLLDP--DTGGKITLLAEPEDGLPLNRPNDGVVDPD-GRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVV 155 (307)
T ss_pred eEEEEccccEEEec--cCCceeEEeccccCCCCcCCCCceeEcCC-CCEEEeCCCccccCccccCCcceEEEEcCCCCEE
Confidence 88888776433332 223332333221 3578999999986 999999988 2 156899999865544
Q ss_pred EEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC---CC--CeE-EEec-CCCCceEEEEEE-CCEEE-EEeCCC
Q psy13635 256 VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD---GN--NRR-ELIN-ENLPHVFGISLL-GDYVY-WTDWQR 326 (357)
Q Consensus 256 ~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d---G~--~~~-~i~~-~~~~~p~gia~~-~~~ly-~td~~~ 326 (357)
.++...+..||||++++++..+|++|+..++|++++.+ |. ++. .+.. ..-..|.|+++| +|.+| .+.+..
T Consensus 156 -~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g 234 (307)
T COG3386 156 -RLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGG 234 (307)
T ss_pred -EeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCC
Confidence 44445589999999999999999999999999999887 32 221 1222 234689999999 57777 455555
Q ss_pred CeEEEEeCccCceeEEEecccC
Q psy13635 327 RSIDRVNKITGNDREVIIERSC 348 (357)
Q Consensus 327 ~~I~~~~~~~g~~~~~i~~~l~ 348 (357)
+.|.++++ +|+....+.-...
T Consensus 235 ~~v~~~~p-dG~l~~~i~lP~~ 255 (307)
T COG3386 235 GRVVRFNP-DGKLLGEIKLPVK 255 (307)
T ss_pred ceEEEECC-CCcEEEEEECCCC
Confidence 69999999 5888887765533
No 15
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.64 E-value=3.4e-12 Score=119.43 Aligned_cols=265 Identities=13% Similarity=0.132 Sum_probs=176.6
Q ss_pred EeecCCCCeEEEEEeCC-----cEEEEEcCCC-CcceEe---ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCC
Q psy13635 34 ALSHHVAAQMLLFATSK-----DIRIANLSRP-LKPVTI---IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNN 104 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~~-----~i~~~~~~~~-~~~~~~---~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 104 (357)
.++.++...+||.++.. .|..+.++.. ...+.+ ......|..+++++.+..||+++..++.+..+.++...
T Consensus 41 ~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g 120 (345)
T PF10282_consen 41 WLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDG 120 (345)
T ss_dssp CEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred eEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCc
Confidence 34556677788888763 4655555442 233332 22566899999999999999999999998887776542
Q ss_pred c-ceeEEEEe----------CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc--eEEEEecCCCCcceeeeeccC
Q psy13635 105 V-GSKHNVIT----------NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK--RKVLYWEDIDQPRAIASYKLP 171 (357)
Q Consensus 105 ~-~~~~~~~~----------~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~--~~~~~~~~~~~p~~i~~~~~~ 171 (357)
. .....+.. ..-..|..+.+++.++.+|++|.+..+|.+++.+... ........
T Consensus 121 ~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~------------- 187 (345)
T PF10282_consen 121 SLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIK------------- 187 (345)
T ss_dssp EEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEE-------------
T ss_pred ccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccc-------------
Confidence 1 11111221 1235688999999999999999999999999987654 22211111
Q ss_pred cccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC--CCceEEE--ec---C---CCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE--GTHRKVL--VN---T---DLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~--g~~~~~~--~~---~---~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
......|..+++++.++.+|+++...+.|.+++.+ ....+.+ +. . ....|.+|+++|...+||+++.+.+
T Consensus 188 ~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~ 267 (345)
T PF10282_consen 188 VPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSN 267 (345)
T ss_dssp CSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTT
T ss_pred cccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCC
Confidence 12224799999999999999999999999988877 2222111 11 1 1237999999999889999999954
Q ss_pred CCeEEEEecCCC--ceEE--EeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC--CCeEEEec-CCCCceEEEE
Q psy13635 242 RPKIERSLLNGG--ERVL--LVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG--NNRRELIN-ENLPHVFGIS 313 (357)
Q Consensus 242 ~~~I~~~~~dg~--~~~~--~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG--~~~~~i~~-~~~~~p~gia 313 (357)
.|..++++.. ..+. .+..+...|.++++++.+..||+++...+.|..++.|. .....+.. -.+..|.-|.
T Consensus 268 --sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~ 344 (345)
T PF10282_consen 268 --SISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIV 344 (345)
T ss_dssp --EEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEE
T ss_pred --EEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEe
Confidence 8888888543 2222 23334567999999999999999999999998887653 22322221 2355666543
No 16
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.63 E-value=2.8e-11 Score=110.10 Aligned_cols=279 Identities=11% Similarity=0.045 Sum_probs=187.0
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 128 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~ 128 (357)
.+.+.++|+.+.. ..........+.++++++.++.+|.+....+.|+.++..+.. ....+.. -..|..+++++.+
T Consensus 10 d~~v~~~d~~t~~-~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~-~~~~~~~~~~~~g 84 (300)
T TIGR03866 10 DNTISVIDTATLE-VTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGE---VIGTLPS-GPDPELFALHPNG 84 (300)
T ss_pred CCEEEEEECCCCc-eEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCc---EEEeccC-CCCccEEEECCCC
Confidence 4567788876533 333334444578899999888899988888899999987653 1222222 2457889999888
Q ss_pred CeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC
Q psy13635 129 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT 208 (357)
Q Consensus 129 ~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~ 208 (357)
+.+|.+....+.|..+++...........+ ..|.++++++.+..++++......+...+....
T Consensus 85 ~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~ 147 (300)
T TIGR03866 85 KILYIANEDDNLVTVIDIETRKVLAEIPVG-----------------VEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTY 147 (300)
T ss_pred CEEEEEcCCCCeEEEEECCCCeEEeEeeCC-----------------CCcceEEECCCCCEEEEEecCCCeEEEEeCCCC
Confidence 889998877789999998764322111111 247889999777666666655445666666544
Q ss_pred ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee-------CCCCCceEEEEecCCCEEEEE
Q psy13635 209 HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-------DRLGWPNGITLDVDNEKLYWC 281 (357)
Q Consensus 209 ~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-------~~l~~P~giaid~~~~~lY~~ 281 (357)
....... ....|..+++++.+..||++.... +.|...++........+. .....|.++++++.+..+|++
T Consensus 148 ~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~--~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~ 224 (300)
T TIGR03866 148 EIVDNVL-VDQRPRFAEFTADGKELWVSSEIG--GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVA 224 (300)
T ss_pred eEEEEEE-cCCCccEEEECCCCCEEEEEcCCC--CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEE
Confidence 3322111 224688999998877777765442 578888887543322111 112357789999888888998
Q ss_pred eCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 282 DAKTDKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 282 d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
....+++..++........... ....+.++++. +..||.+....+.|..++..+++.++.+..+ ..|.+|.
T Consensus 225 ~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~ 297 (300)
T TIGR03866 225 LGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVV 297 (300)
T ss_pred cCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeE
Confidence 8777889999886544332222 23357778874 5788888877889999999888888888665 7888875
No 17
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=99.63 E-value=4.4e-13 Score=126.35 Aligned_cols=239 Identities=18% Similarity=0.198 Sum_probs=159.5
Q ss_pred CCCcEEEEEEEccCCEEEEEeCC------------CCeEEEEEc-CCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEe
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHG------------TEMISCCTF-DGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTD 135 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~------------~~~I~~~~~-~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td 135 (357)
.+.+|.+|++|+ +++||+++.. .++|.++.- ++.......+++.+++..|.||++.. ++ ||+++
T Consensus 12 ~~~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~-~G-lyV~~ 88 (367)
T TIGR02604 12 LLRNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAV-GG-VYVAT 88 (367)
T ss_pred ccCCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEec-CC-EEEeC
Confidence 488999999997 6889999842 237888764 33322244678889999999999984 55 99987
Q ss_pred CCCCEEEEE-EcCCC-----ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC------------
Q psy13635 136 SETNKLEVS-SLDGK-----KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT------------ 197 (357)
Q Consensus 136 ~~~~~I~~~-~~~g~-----~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~------------ 197 (357)
. .+|.++ +.+|. ..++++ .++.... ....+.++++++++ +|+||+++...
T Consensus 89 ~--~~i~~~~d~~gdg~ad~~~~~l~-~~~~~~~--------~~~~~~~~~l~~gp-DG~LYv~~G~~~~~~~~~~~~~~ 156 (367)
T TIGR02604 89 P--PDILFLRDKDGDDKADGEREVLL-SGFGGQI--------NNHHHSLNSLAWGP-DGWLYFNHGNTLASKVTRPGTSD 156 (367)
T ss_pred C--CeEEEEeCCCCCCCCCCccEEEE-EccCCCC--------CcccccccCceECC-CCCEEEecccCCCceeccCCCcc
Confidence 4 468877 44442 233333 2221100 00134689999996 67999987731
Q ss_pred -------CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC------------CC-----
Q psy13635 198 -------DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN------------GG----- 253 (357)
Q Consensus 198 -------~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d------------g~----- 253 (357)
+.|++++++|+..+++. .++..|.|+++|+ .|.||++|.... ...+++.- +.
T Consensus 157 ~~~~~~~g~i~r~~pdg~~~e~~a-~G~rnp~Gl~~d~-~G~l~~tdn~~~--~~~~i~~~~~g~~~g~~~~~~~~~~~~ 232 (367)
T TIGR02604 157 ESRQGLGGGLFRYNPDGGKLRVVA-HGFQNPYGHSVDS-WGDVFFCDNDDP--PLCRVTPVAEGGRNGYQSFNGRRYDHA 232 (367)
T ss_pred CcccccCceEEEEecCCCeEEEEe-cCcCCCccceECC-CCCEEEEccCCC--ceeEEcccccccccCCCCCCCcccccc
Confidence 47999999998877665 5789999999998 599999998643 33333311 00
Q ss_pred ---ceEEE-----------------eeCCCCCceEEEEe-------cCCCEEEEEeCCCCeEEEEeCC--CCCe----EE
Q psy13635 254 ---ERVLL-----------------VKDRLGWPNGITLD-------VDNEKLYWCDAKTDKIEMIDFD--GNNR----RE 300 (357)
Q Consensus 254 ---~~~~~-----------------~~~~l~~P~giaid-------~~~~~lY~~d~~~~~I~~~~~d--G~~~----~~ 300 (357)
..... .......|.|+++- ...+.+++++...++|.++.++ |... ..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ap~G~~~y~g~~fp~~~~g~~fv~~~~~~~v~~~~l~~~g~~~~~~~~~ 312 (367)
T TIGR02604 233 DRGADHEVPTGEWRQDDRGVETVGDVAGGGTAPCGIAFYRGDALPEEYRGLLLVGDAHGQLIVRYSLEPKGAGFKGERPE 312 (367)
T ss_pred cccccccccccccccccccccccccccCCCccccEEEEeCCCcCCHHHCCCEEeeeccCCEEEEEEeecCCCccEeecCc
Confidence 00000 00112368899986 3458899999999999999875 4322 12
Q ss_pred EecC--CCCceEEEEEE-CCEEEEEeCCC
Q psy13635 301 LINE--NLPHVFGISLL-GDYVYWTDWQR 326 (357)
Q Consensus 301 i~~~--~~~~p~gia~~-~~~ly~td~~~ 326 (357)
++.. ....|..+++. +|.||++||..
T Consensus 313 ~l~~~~~~~rp~dv~~~pDG~Lyv~d~~~ 341 (367)
T TIGR02604 313 FLRSNDTWFRPVNVTVGPDGALYVSDWYD 341 (367)
T ss_pred eEecCCCcccccceeECCCCCEEEEEecc
Confidence 3332 22578888887 68999999554
No 18
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.61 E-value=4.4e-12 Score=118.06 Aligned_cols=269 Identities=13% Similarity=0.084 Sum_probs=172.6
Q ss_pred EEeecCCCCeEEEEEeC--CcEEEEEcCCCCcceEe--ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCccee
Q psy13635 33 YALSHHVAAQMLLFATS--KDIRIANLSRPLKPVTI--IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSK 108 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~--~~i~~~~~~~~~~~~~~--~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 108 (357)
..++.++...+|+.++. ..|..++++.....+.. .+....|..++++++++.||.++..++.|..++++.......
T Consensus 38 ~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~ 117 (330)
T PRK11028 38 QPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA 117 (330)
T ss_pred ccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCC
Confidence 33455666677777753 55766666532233222 233457899999999999999998888888877753210001
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc-eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK-RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA 187 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~ 187 (357)
......+...|.++++++.++.+|+++...++|.+++++... .......... ......|.++++++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~-----------~~~g~~p~~~~~~pdg 186 (330)
T PRK11028 118 PIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVT-----------TVEGAGPRHMVFHPNQ 186 (330)
T ss_pred ceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCcee-----------cCCCCCCceEEECCCC
Confidence 111123446799999999999999999999999999986421 1000000000 0112479999999999
Q ss_pred CeEEEEeCCCCeEEEEEcCC--CceEEEec-----C---CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC--CCce
Q psy13635 188 RNLYWTDTGTDRIEVCRLEG--THRKVLVN-----T---DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN--GGER 255 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g--~~~~~~~~-----~---~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d--g~~~ 255 (357)
+++|+++...+.|...+.+. ...+.+.. . ....|.+++++|.+.+||+++... ..|..++.+ +...
T Consensus 187 ~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~--~~I~v~~i~~~~~~~ 264 (330)
T PRK11028 187 QYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTA--SLISVFSVSEDGSVL 264 (330)
T ss_pred CEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCC--CeEEEEEEeCCCCeE
Confidence 99999999889998888762 12222111 1 112455799999888999998764 377766664 3322
Q ss_pred EEEee-CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC--CeEEEec-CCCCceEEEEE
Q psy13635 256 VLLVK-DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN--NRRELIN-ENLPHVFGISL 314 (357)
Q Consensus 256 ~~~~~-~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~--~~~~i~~-~~~~~p~gia~ 314 (357)
+.+-. .....|.++++++++.+||++....+.|..++.+.. ....+.. .....|.++++
T Consensus 265 ~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~~~~g~~P~~~~~ 327 (330)
T PRK11028 265 SFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGRYAVGQGPMWVSV 327 (330)
T ss_pred EEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCcEEEccccccCCCceEEEE
Confidence 22211 112579999999999999999988888888876532 2222211 12557888776
No 19
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.55 E-value=1.7e-10 Score=103.09 Aligned_cols=295 Identities=16% Similarity=0.167 Sum_probs=200.2
Q ss_pred CCcEEEEEcCC---CCcceEeccCCCcEEEEEEEccCCEEEEEeCC--CCeEEEEEcCCCCcceeEEEEeCC---cCCce
Q psy13635 49 SKDIRIANLSR---PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHG--TEMISCCTFDGNNVGSKHNVITNG---LITPD 120 (357)
Q Consensus 49 ~~~i~~~~~~~---~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~---~~~p~ 120 (357)
+..|.++++++ .......+....+|.-|++++++..||..... .+.|-....|..+ ..-+++... -..|.
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~--G~Lt~ln~~~~~g~~p~ 92 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDD--GRLTFLNRQTLPGSPPC 92 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCC--CeEEEeeccccCCCCCe
Confidence 44687777764 23444456788899999999999999998776 6677666666532 113443322 24569
Q ss_pred eEEEEcCCCeEEEEeCCCCEEEEEEc--CCCceEE---EEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 121 GLAIDWLTEKLYWTDSETNKLEVSSL--DGKKRKV---LYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 121 glavd~~~~~ly~td~~~~~I~~~~~--~g~~~~~---~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
-+++|..++.||.++...+.|.+..+ +|..... +...+. .|.. .+.-.++...-++|.++.|+++|-
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~-~p~~-------rQ~~~h~H~a~~tP~~~~l~v~DL 164 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGS-GPHE-------RQESPHVHSANFTPDGRYLVVPDL 164 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCC-CCCc-------cccCCccceeeeCCCCCEEEEeec
Confidence 99999988999999999999988776 4554332 111111 1110 112234667788999999999999
Q ss_pred CCCeEEEEEcCCCceEEEec---CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC--ceEEEe-----eC---C
Q psy13635 196 GTDRIEVCRLEGTHRKVLVN---TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG--ERVLLV-----KD---R 262 (357)
Q Consensus 196 ~~~~I~~~~~~g~~~~~~~~---~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~--~~~~~~-----~~---~ 262 (357)
+.++|..++++......... .....|+-|+++|.....|+...-. +.|.....+.. ...++. .. +
T Consensus 165 G~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~--stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g 242 (346)
T COG2706 165 GTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELN--STVDVLEYNPAVGKFEELQTIDTLPEDFTG 242 (346)
T ss_pred CCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccC--CEEEEEEEcCCCceEEEeeeeccCccccCC
Confidence 99999998887332222111 2446899999999988899988774 58888887763 222221 11 2
Q ss_pred CCCceEEEEecCCCEEEEEeCCCCeEEEEeC--CCCCeEEEe--cCCCCceEEEEEE--CCEEEEEeCCCCeE--EEEeC
Q psy13635 263 LGWPNGITLDVDNEKLYWCDAKTDKIEMIDF--DGNNRRELI--NENLPHVFGISLL--GDYVYWTDWQRRSI--DRVNK 334 (357)
Q Consensus 263 l~~P~giaid~~~~~lY~~d~~~~~I~~~~~--dG~~~~~i~--~~~~~~p~gia~~--~~~ly~td~~~~~I--~~~~~ 334 (357)
-.+...|.+.+++..||+++.+.+.|..+.. +|.....+. ......|.++.+. +++|+++...++.| +++++
T Consensus 243 ~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~ 322 (346)
T COG2706 243 TNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDK 322 (346)
T ss_pred CCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcC
Confidence 3455789999999999999999998877655 444333221 1234568777775 68999999888765 56777
Q ss_pred ccCceeEEEe-cccCCceeeee
Q psy13635 335 ITGNDREVII-ERSCTGVTRRR 355 (357)
Q Consensus 335 ~~g~~~~~i~-~~l~~p~~i~~ 355 (357)
.+|+....-. -..+.|+-++.
T Consensus 323 ~TG~L~~~~~~~~~p~Pvcv~f 344 (346)
T COG2706 323 ETGRLTLLGRYAVVPEPVCVKF 344 (346)
T ss_pred CCceEEecccccCCCCcEEEEE
Confidence 7777666554 35678887765
No 20
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=99.54 E-value=2.6e-11 Score=114.76 Aligned_cols=249 Identities=16% Similarity=0.137 Sum_probs=182.4
Q ss_pred EEEEeecCCCCeEEEEEe--CCcEEEEEcCCCCcceEecc-CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcce
Q psy13635 31 FWYALSHHVAAQMLLFAT--SKDIRIANLSRPLKPVTIIK-DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGS 107 (357)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~-~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 107 (357)
.+..+........+++++ .+.+..++.. ....+.... ....|.++++.+.+.++|+.+...+.|..++.+...
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~-~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~--- 107 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDAT-SNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNT--- 107 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccc-cceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccc---
Confidence 455555555555566666 3334444443 222222222 226789999999999999999999999999966553
Q ss_pred eEEEEeCCcCCceeEEEEcCCCeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeC
Q psy13635 108 KHNVITNGLITPDGLAIDWLTEKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDW 185 (357)
Q Consensus 108 ~~~~~~~~~~~p~glavd~~~~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~ 185 (357)
.......+. .|.++++++.++.+|+++. .+++|.+++............+ ..|.++++|+
T Consensus 108 ~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG-----------------~~P~~~a~~p 169 (381)
T COG3391 108 VLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVG-----------------NTPTGVAVDP 169 (381)
T ss_pred eeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecC-----------------CCcceEEECC
Confidence 233333333 8999999999999999999 4799999988765443333332 2689999999
Q ss_pred CCCeEEEEeCCCCeEEEEEcCCCceEE-E---ecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEE--e
Q psy13635 186 VARNLYWTDTGTDRIEVCRLEGTHRKV-L---VNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLL--V 259 (357)
Q Consensus 186 ~~~~lY~td~~~~~I~~~~~~g~~~~~-~---~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~--~ 259 (357)
.++++|+++...++|..++..+..... - .-.....|.++++++...++|+++.......+.+.+......... .
T Consensus 170 ~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~ 249 (381)
T COG3391 170 DGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLP 249 (381)
T ss_pred CCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccc
Confidence 999999999999999999988765542 0 012457899999999988999999885224888888887666554 3
Q ss_pred eCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEe
Q psy13635 260 KDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 260 ~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~ 302 (357)
...+ .|.++++++.+..+|+++...+.+..++..........
T Consensus 250 ~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~ 291 (381)
T COG3391 250 VGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTG 291 (381)
T ss_pred cccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeee
Confidence 3445 89999999999999999999999999998776554443
No 21
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=99.48 E-value=5.9e-11 Score=110.16 Aligned_cols=246 Identities=17% Similarity=0.179 Sum_probs=155.5
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE----EEeCCcCCceeEEEEc---CCCeEEEEeCCC----
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN----VITNGLITPDGLAIDW---LTEKLYWTDSET---- 138 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~~~~~~~~p~glavd~---~~~~ly~td~~~---- 138 (357)
|.+|++|++.++ +++|+++. .+.|+++..+|... .... +...+.....|+|+++ .++.||++-...
T Consensus 1 L~~P~~~a~~pd-G~l~v~e~-~G~i~~~~~~g~~~-~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~ 77 (331)
T PF07995_consen 1 LNNPRSMAFLPD-GRLLVAER-SGRIWVVDKDGSLK-TPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDG 77 (331)
T ss_dssp ESSEEEEEEETT-SCEEEEET-TTEEEEEETTTEEC-EEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSS
T ss_pred CCCceEEEEeCC-CcEEEEeC-CceEEEEeCCCcCc-ceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCC
Confidence 468999999985 89999998 88999999777630 0111 1233456789999998 358888876532
Q ss_pred ----CEEEEEEcCCC-----ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-------------
Q psy13635 139 ----NKLEVSSLDGK-----KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG------------- 196 (357)
Q Consensus 139 ----~~I~~~~~~g~-----~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~------------- 196 (357)
.+|.|+..+.. ..+.++...-. .....+.-.+|++++ .|+||++-..
T Consensus 78 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~----------~~~~~H~g~~l~fgp-DG~LYvs~G~~~~~~~~~~~~~~ 146 (331)
T PF07995_consen 78 GDNDNRVVRFTLSDGDGDLSSEEVLVTGLPD----------TSSGNHNGGGLAFGP-DGKLYVSVGDGGNDDNAQDPNSL 146 (331)
T ss_dssp SSEEEEEEEEEEETTSCEEEEEEEEEEEEES-----------CSSSS-EEEEEE-T-TSEEEEEEB-TTTGGGGCSTTSS
T ss_pred CCcceeeEEEeccCCccccccceEEEEEeCC----------CCCCCCCCccccCCC-CCcEEEEeCCCCCcccccccccc
Confidence 57888877554 12233221100 013445667899996 5699998532
Q ss_pred CCeEEEEEcCCC-------------ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEecCC----------
Q psy13635 197 TDRIEVCRLEGT-------------HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK-RPKIERSLLNG---------- 252 (357)
Q Consensus 197 ~~~I~~~~~~g~-------------~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~~dg---------- 252 (357)
.++|.+++++|+ ..++ ...++.+|.++++||.+|.||.+|.+.. .-.|.++...+
T Consensus 147 ~G~ilri~~dG~~p~dnP~~~~~~~~~~i-~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~ 225 (331)
T PF07995_consen 147 RGKILRIDPDGSIPADNPFVGDDGADSEI-YAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGG 225 (331)
T ss_dssp TTEEEEEETTSSB-TTSTTTTSTTSTTTE-EEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSS
T ss_pred cceEEEecccCcCCCCCccccCCCceEEE-EEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCC
Confidence 248999999987 2333 3457899999999998899999998753 12343333211
Q ss_pred -----C----------c-eEEEeeCCCCCceEEEEec------CCCEEEEEeCCCCeEEEEeCCCCC----eEEEecCCC
Q psy13635 253 -----G----------E-RVLLVKDRLGWPNGITLDV------DNEKLYWCDAKTDKIEMIDFDGNN----RRELINENL 306 (357)
Q Consensus 253 -----~----------~-~~~~~~~~l~~P~giaid~------~~~~lY~~d~~~~~I~~~~~dG~~----~~~i~~~~~ 306 (357)
. . .-......-..|.|+++-. ..+.+++++...++|+++.++... .+.++ ...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ 304 (331)
T PF07995_consen 226 PKYSGPPIGDAPSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFL-GGF 304 (331)
T ss_dssp CSTTSS-ECTGSS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEEC-TTS
T ss_pred CCCCCCccccccCCCCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEcc-ccC
Confidence 0 0 0001111224688998852 367899999999999999986332 23333 334
Q ss_pred C-ceEEEEEE-CCEEEEEeCCCCeEEE
Q psy13635 307 P-HVFGISLL-GDYVYWTDWQRRSIDR 331 (357)
Q Consensus 307 ~-~p~gia~~-~~~ly~td~~~~~I~~ 331 (357)
. .|.+|++. +|.||+++..+++|+|
T Consensus 305 ~~r~~~v~~~pDG~Lyv~~d~~G~iyR 331 (331)
T PF07995_consen 305 GGRPRDVAQGPDGALYVSDDSDGKIYR 331 (331)
T ss_dssp SS-EEEEEEETTSEEEEEE-TTTTEEE
T ss_pred CCCceEEEEcCCCeEEEEECCCCeEeC
Confidence 4 78999998 6899999998899986
No 22
>KOG1215|consensus
Probab=99.47 E-value=1.2e-11 Score=129.21 Aligned_cols=306 Identities=21% Similarity=0.351 Sum_probs=221.7
Q ss_pred EEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCC--eEEEEEcCCCCcceeEEEEeCCcCCce
Q psy13635 43 MLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTE--MISCCTFDGNNVGSKHNVITNGLITPD 120 (357)
Q Consensus 43 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~--~I~~~~~~g~~~~~~~~~~~~~~~~p~ 120 (357)
.++.+....+..+..+++..-.........+......+.++..||++.... .+...+.++.. ........+.-|.
T Consensus 211 ~~~~~~~~~~~~~~c~g~~~~i~~~~~~Dg~~dc~~~~de~~~~~~~~~~~~~e~~~~~~~~~~---~~~~~~g~~d~pd 287 (877)
T KOG1215|consen 211 RIYWTDDSRIEVTRCDGSSRCILISEVCDGPRDCVDGPDEGVMNCSDATCEAPEIECADGDCSD---RQKLCDGDLDCPD 287 (877)
T ss_pred cccccCCcceeEEEecCCCcEEeehhccCCCcccccCCcCceeEeeccccCCcceeecCCCCcc---ceEEecCccCCCC
Confidence 343333323666777664455555667778888888888888999998764 67776666664 2333445555699
Q ss_pred eEEEEcCCCeEEE---------------------EeCCCCEEEEEE-cCCCceEEEEec-------------C-------
Q psy13635 121 GLAIDWLTEKLYW---------------------TDSETNKLEVSS-LDGKKRKVLYWE-------------D------- 158 (357)
Q Consensus 121 glavd~~~~~ly~---------------------td~~~~~I~~~~-~~g~~~~~~~~~-------------~------- 158 (357)
|.+.+--...+|| ++..+..+.+.. ..+....+.+.. .
T Consensus 288 g~de~~~~~~~~~~~~~d~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 367 (877)
T KOG1215|consen 288 GLDEDYCKKKLYWSMNVDGSGRRILLSKLCHGYWTDGLNECAERVLKCSHKCPDVSVGPRCDCMGAKVLPLGARTDSNPC 367 (877)
T ss_pred cccccccccceeeeeecccCCceeeecccCccccccccccchhhcccccCCCCccccCCcccCCccceecccccccCCcc
Confidence 9998876777774 332221111110 000000000000 0
Q ss_pred ---------C---CCcceeeee----------------------------------------ccCcccccCCceEEEeCC
Q psy13635 159 ---------I---DQPRAIASY----------------------------------------KLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 159 ---------~---~~p~~i~~~----------------------------------------~~~~~~~~~p~glavD~~ 186 (357)
+ ..|.....+ ..|..++..+..+.+|..
T Consensus 368 ~~~~g~Csq~C~~~~p~~~~c~c~~g~~~~~~~c~~~~~~~~~l~~s~~~~ir~~~~~~~~~~~p~~~~~~~~~~d~d~~ 447 (877)
T KOG1215|consen 368 ESDNGGCSQLCVPNSPGTFKCACSPGYELRLDKCEASDQPEAFLLFSNRHDIRRISLDCSDVSRPLEGIKNAVALDFDVL 447 (877)
T ss_pred cccCCccceeccCCCCCceeEecCCCcEeccCCceecCCCCcEEEEecCccceecccCCCcceEEccCCccceEEEEEec
Confidence 0 001111110 012333356777888888
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCc
Q psy13635 187 ARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWP 266 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P 266 (357)
++.+||+|.....|.....++.....+...+.-.|.++++|-..+.+||+|... ..+...+++|+.+.+++...+..|
T Consensus 448 ~~~i~~~d~~~~~i~~~~~~~~~~~~~~~~g~~~~~~lavD~~~~~~y~tDe~~--~~i~v~~~~g~~~~vl~~~~l~~~ 525 (877)
T KOG1215|consen 448 NNRIYWADLSDEKICRASQDGSSECELCGDGLCIPEGLAVDWIGDNIYWTDEGN--CLIEVADLDGSSRKVLVSKDLDLP 525 (877)
T ss_pred CCEEEEEeccCCeEeeeccCCCccceEeccCccccCcEEEEeccCCceecccCC--ceeEEEEccCCceeEEEecCCCCc
Confidence 999999999999999999999877776777788999999999999999999995 499999999999889988888999
Q ss_pred eEEEEecCCCEEEEEeCC-CCeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCCCC-eEEEEeCccCceeE-
Q psy13635 267 NGITLDVDNEKLYWCDAK-TDKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQRR-SIDRVNKITGNDRE- 341 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~-~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~~-~I~~~~~~~g~~~~- 341 (357)
..+++|+..+.+||+|++ ..+|.+..+||..+..++..++..|.|++++ .+.+||+|.... .|.+++- +|+...
T Consensus 526 r~~~v~p~~g~~~wtd~~~~~~i~ra~~dg~~~~~l~~~~~~~p~glt~d~~~~~~yw~d~~~~~~i~~~~~-~g~~r~~ 604 (877)
T KOG1215|consen 526 RSIAVDPEKGLMFWTDWGQPPRIERASLDGSERAVLVTNGILWPNGLTIDYETDRLYWADAKLDYTIESANM-DGQNRRV 604 (877)
T ss_pred cceeeccccCeeEEecCCCCchhhhhcCCCCCceEEEeCCccCCCcceEEeecceeEEEcccCCcceeeeec-CCCceEE
Confidence 999999999999999987 5589999999999999988778999999997 699999999988 6888887 788776
Q ss_pred EEecccCCceeee
Q psy13635 342 VIIERSCTGVTRR 354 (357)
Q Consensus 342 ~i~~~l~~p~~i~ 354 (357)
.+...+..|+++.
T Consensus 605 ~~~~~~~~p~~~~ 617 (877)
T KOG1215|consen 605 VDSEDLPHPFGLS 617 (877)
T ss_pred eccccCCCceEEE
Confidence 6666788888775
No 23
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=99.46 E-value=8.6e-11 Score=101.47 Aligned_cols=255 Identities=11% Similarity=0.045 Sum_probs=178.8
Q ss_pred CcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCE
Q psy13635 61 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNK 140 (357)
Q Consensus 61 ~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~ 140 (357)
...+..+.+-..|..++-++ ++.+|+++..++.|-+.+...++ .++.-...-..|.+|.+++ ++..+++|.+. .
T Consensus 52 s~~~fpvp~G~ap~dvapap-dG~VWft~qg~gaiGhLdP~tGe---v~~ypLg~Ga~Phgiv~gp-dg~~Witd~~~-a 125 (353)
T COG4257 52 SSAEFPVPNGSAPFDVAPAP-DGAVWFTAQGTGAIGHLDPATGE---VETYPLGSGASPHGIVVGP-DGSAWITDTGL-A 125 (353)
T ss_pred ccceeccCCCCCccccccCC-CCceEEecCccccceecCCCCCc---eEEEecCCCCCCceEEECC-CCCeeEecCcc-e
Confidence 34555667777888888876 78899999999999999998774 2344334446899999996 78899999876 8
Q ss_pred EEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCC
Q psy13635 141 LEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVE 220 (357)
Q Consensus 141 I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~ 220 (357)
|.|++......+.+-... + ..-..-+-..+| ..|+|+++... +---+.|+.....++.-......
T Consensus 126 I~R~dpkt~evt~f~lp~-~------------~a~~nlet~vfD-~~G~lWFt~q~-G~yGrLdPa~~~i~vfpaPqG~g 190 (353)
T COG4257 126 IGRLDPKTLEVTRFPLPL-E------------HADANLETAVFD-PWGNLWFTGQI-GAYGRLDPARNVISVFPAPQGGG 190 (353)
T ss_pred eEEecCcccceEEeeccc-c------------cCCCcccceeeC-CCccEEEeecc-ccceecCcccCceeeeccCCCCC
Confidence 999887444333331111 0 011233456788 57799998874 22335555555555554445578
Q ss_pred ceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee-CC-CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC-
Q psy13635 221 PRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-DR-LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN- 297 (357)
Q Consensus 221 P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-~~-l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~- 297 (357)
|+||++.|+ |.+|++....+ -|.+++.-....+++.. .. -..-..+-.| .-++++.+++++++++++++.-..
T Consensus 191 pyGi~atpd-Gsvwyaslagn--aiaridp~~~~aev~p~P~~~~~gsRriwsd-pig~~wittwg~g~l~rfdPs~~sW 266 (353)
T COG4257 191 PYGICATPD-GSVWYASLAGN--AIARIDPFAGHAEVVPQPNALKAGSRRIWSD-PIGRAWITTWGTGSLHRFDPSVTSW 266 (353)
T ss_pred CcceEECCC-CcEEEEecccc--ceEEcccccCCcceecCCCcccccccccccC-ccCcEEEeccCCceeeEeCcccccc
Confidence 999999985 99999988754 88888865444433321 22 1223456677 678999999999999999986543
Q ss_pred eEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCcee
Q psy13635 298 RRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDR 340 (357)
Q Consensus 298 ~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~ 340 (357)
.+.-+.....+|+.+-+| .|+++.+|+..+.|.++|.++-+..
T Consensus 267 ~eypLPgs~arpys~rVD~~grVW~sea~agai~rfdpeta~ft 310 (353)
T COG4257 267 IEYPLPGSKARPYSMRVDRHGRVWLSEADAGAIGRFDPETARFT 310 (353)
T ss_pred eeeeCCCCCCCcceeeeccCCcEEeeccccCceeecCcccceEE
Confidence 333344456689999999 4899999999999999998554443
No 24
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=99.44 E-value=3.7e-10 Score=99.52 Aligned_cols=198 Identities=15% Similarity=0.123 Sum_probs=127.0
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
...+.||++++.++.||.+.-....|..++++|...+.+.-. ++..|.||++- .++.+.+++.
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~----------------g~~D~EgI~y~-g~~~~vl~~E 83 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLD----------------GFGDYEGITYL-GNGRYVLSEE 83 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-S----------------S-SSEEEEEE--STTEEEEEET
T ss_pred cCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCC----------------CCCCceeEEEE-CCCEEEEEEc
Confidence 356999999999999999888899999999999877776433 34578888885 5667777887
Q ss_pred CCCeEEEEEcC--CCce--E---EEec--C--CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEec--CCCceEEEee--
Q psy13635 196 GTDRIEVCRLE--GTHR--K---VLVN--T--DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLL--NGGERVLLVK-- 260 (357)
Q Consensus 196 ~~~~I~~~~~~--g~~~--~---~~~~--~--~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~--dg~~~~~~~~-- 260 (357)
..+++..+..+ +... . .+.. . .-..-.|||.|+.+++||++..... ..|+.++. .+........
T Consensus 84 r~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P-~~l~~~~~~~~~~~~~~~~~~~ 162 (248)
T PF06977_consen 84 RDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKP-KRLYEVNGFPGGFDLFVSDDQD 162 (248)
T ss_dssp TTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSS-EEEEEEESTT-SS--EEEE-HH
T ss_pred CCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCC-hhhEEEccccCccceeeccccc
Confidence 77888877763 2221 1 1111 1 1123579999999999999987754 46777776 3332222221
Q ss_pred -----CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec--------CCCCceEEEEEE-CCEEEEEeCCC
Q psy13635 261 -----DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN--------ENLPHVFGISLL-GDYVYWTDWQR 326 (357)
Q Consensus 261 -----~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~--------~~~~~p~gia~~-~~~ly~td~~~ 326 (357)
..+..|.++++|+..++||+....+.++..++.+|.-...+.- ..+.+|.|||++ +|.||+++- .
T Consensus 163 ~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsE-p 241 (248)
T PF06977_consen 163 LDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSE-P 241 (248)
T ss_dssp HH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEET-T
T ss_pred cccccceeccccceEEcCCCCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcC-C
Confidence 1356799999999999999999999999999999985543321 236789999999 599999984 4
Q ss_pred CeEEEE
Q psy13635 327 RSIDRV 332 (357)
Q Consensus 327 ~~I~~~ 332 (357)
+..+++
T Consensus 242 Nlfy~f 247 (248)
T PF06977_consen 242 NLFYRF 247 (248)
T ss_dssp TEEEEE
T ss_pred ceEEEe
Confidence 577766
No 25
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.43 E-value=3.6e-09 Score=96.15 Aligned_cols=253 Identities=11% Similarity=0.074 Sum_probs=165.0
Q ss_pred ecCCCCeEEEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe
Q psy13635 36 SHHVAAQMLLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 36 ~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
..++....++.+. .+.|+.+|+.+.. ..........+..+++++.++.+|.+...++.|...++.... ....+.
T Consensus 37 ~~~~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~---~~~~~~ 112 (300)
T TIGR03866 37 TLSKDGKLLYVCASDSDTIQVIDLATGE-VIGTLPSGPDPELFALHPNGKILYIANEDDNLVTVIDIETRK---VLAEIP 112 (300)
T ss_pred EECCCCCEEEEEECCCCeEEEEECCCCc-EEEeccCCCCccEEEECCCCCEEEEEcCCCCeEEEEECCCCe---EEeEee
Confidence 3344444555554 3568889987632 332233344577889999888899887777889999987653 122222
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
. -..|.++++++.+..++.+......+..++............+ ..|..+++++.++.||++
T Consensus 113 ~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~-----------------~~~~~~~~s~dg~~l~~~ 174 (300)
T TIGR03866 113 V-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVD-----------------QRPRFAEFTADGKELWVS 174 (300)
T ss_pred C-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcC-----------------CCccEEEECCCCCEEEEE
Confidence 1 2358899999867666666655455666666543322111111 257788998888888887
Q ss_pred eCCCCeEEEEEcCCCce-EEEecC------CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCc
Q psy13635 194 DTGTDRIEVCRLEGTHR-KVLVNT------DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWP 266 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~-~~~~~~------~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P 266 (357)
....+.|...++..... ..+... ....|.+++++|....+|++.... .+|...+............ -..|
T Consensus 175 ~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~--~~i~v~d~~~~~~~~~~~~-~~~~ 251 (300)
T TIGR03866 175 SEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPA--NRVAVVDAKTYEVLDYLLV-GQRV 251 (300)
T ss_pred cCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCC--CeEEEEECCCCcEEEEEEe-CCCc
Confidence 66667899888875432 222110 123578999999877888887664 4788888765444333322 2468
Q ss_pred eEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEE
Q psy13635 267 NGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISL 314 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~ 314 (357)
.++++++.+.+||.+....+.|...+.++.....-+. ....|.+|++
T Consensus 252 ~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~ 298 (300)
T TIGR03866 252 WQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIK-VGRLPWGVVV 298 (300)
T ss_pred ceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-cccccceeEe
Confidence 8999998888999888778899999998766433333 3578999885
No 26
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.41 E-value=6.5e-09 Score=96.07 Aligned_cols=275 Identities=12% Similarity=0.109 Sum_probs=171.6
Q ss_pred CCeEEEEEeC------CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC---------CCCeEEEEEcCCCC
Q psy13635 40 AAQMLLFATS------KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTFDGNN 104 (357)
Q Consensus 40 ~~~~l~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~ 104 (357)
+...+|+.+. +.|..+|.+. .+..-.++....|.++ ++++...||++.. .++.|..++.....
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~-~~v~g~i~~G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~ 88 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEA-GRVLGMTDGGFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL 88 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCC-CEEEEEEEccCCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCc
Confidence 3344666664 4689999977 3444445555678887 9999999999999 88999999998775
Q ss_pred cceeEEEEe-C-----CcCCceeEEEEcCCCeEEEEeCC-CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccC
Q psy13635 105 VGSKHNVIT-N-----GLITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEH 177 (357)
Q Consensus 105 ~~~~~~~~~-~-----~~~~p~glavd~~~~~ly~td~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~ 177 (357)
. ..++.. . ....|..+++.+.++.||+++.. .+.+.++++.......-+..
T Consensus 89 ~--~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v-------------------- 146 (352)
T TIGR02658 89 P--IADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV-------------------- 146 (352)
T ss_pred E--EeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC--------------------
Confidence 2 122221 1 12345699999999999999966 89999999876544322211
Q ss_pred CceEEEeCCCCeEEEEeCCC-------CeEEEEEc--CCCceE---EEecC----CCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 178 PDGVAVDWVARNLYWTDTGT-------DRIEVCRL--EGTHRK---VLVNT----DLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~-------~~I~~~~~--~g~~~~---~~~~~----~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
| ....+|.+.... ++...+.+ +|+... .+... -+.+| .+.+.+|+.+|....
T Consensus 147 p-------~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP---~~~~~dg~~~~vs~e-- 214 (352)
T TIGR02658 147 P-------DCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP---AYSNKSGRLVWPTYT-- 214 (352)
T ss_pred C-------CCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCC---ceEcCCCcEEEEecC--
Confidence 1 111233322211 12222222 222110 11111 12566 345534666655554
Q ss_pred CCeEEEEecCCCceEEEe-----eCC----CCCceE---EEEecCCCEEEEEe-C--------CCCeEEEEeCCCCCeEE
Q psy13635 242 RPKIERSLLNGGERVLLV-----KDR----LGWPNG---ITLDVDNEKLYWCD-A--------KTDKIEMIDFDGNNRRE 300 (357)
Q Consensus 242 ~~~I~~~~~dg~~~~~~~-----~~~----l~~P~g---iaid~~~~~lY~~d-~--------~~~~I~~~~~dG~~~~~ 300 (357)
+.|..+++.+....... ... --.|.| +++++.++++|++. . ..+.|+.+|.....+..
T Consensus 215 -G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~ 293 (352)
T TIGR02658 215 -GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLR 293 (352)
T ss_pred -CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEE
Confidence 48999997665433221 111 124555 99999999999954 2 22689999986554433
Q ss_pred EecCCCCceEEEEEE--CC-EEEEEeCCCCeEEEEeCccCceeEEEecccCCcee
Q psy13635 301 LINENLPHVFGISLL--GD-YVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVT 352 (357)
Q Consensus 301 i~~~~~~~p~gia~~--~~-~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~ 352 (357)
-+. -...|.+|++. +. .||.++..++.|..+|..+++....+..-...|.=
T Consensus 294 ~i~-vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~~vg~~P~~ 347 (352)
T TIGR02658 294 KIE-LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVNQLGRGPQV 347 (352)
T ss_pred EEe-CCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeeccCCCCCeE
Confidence 332 34578888885 57 89999999999999999899988887454455543
No 27
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=99.37 E-value=2.7e-09 Score=94.01 Aligned_cols=206 Identities=14% Similarity=0.134 Sum_probs=125.2
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
-..++.|++|++.++.||-.......|+..+.+|.- .+.+-..++.-|+||++- .++.+.+++...+++..+..+.
T Consensus 20 ~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~v---lr~i~l~g~~D~EgI~y~-g~~~~vl~~Er~~~L~~~~~~~ 95 (248)
T PF06977_consen 20 ILDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKV---LRRIPLDGFGDYEGITYL-GNGRYVLSEERDQRLYIFTIDD 95 (248)
T ss_dssp --S-EEEEEEETTTTEEEEEETTTTEEEEEETT--E---EEEEE-SS-SSEEEEEE--STTEEEEEETTTTEEEEEEE--
T ss_pred ccCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCE---EEEEeCCCCCCceeEEEE-CCCEEEEEEcCCCcEEEEEEec
Confidence 344699999999999999888888999999998763 344556778899999996 4566666787788999888732
Q ss_pred --CceEEE--EecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC-eEEEEEc--CCCceEEEec------
Q psy13635 149 --KKRKVL--YWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD-RIEVCRL--EGTHRKVLVN------ 215 (357)
Q Consensus 149 --~~~~~~--~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~-~I~~~~~--~g~~~~~~~~------ 215 (357)
.....- -.-.+. ++........|||.|+.+++||++....- .|+..+. .+........
T Consensus 96 ~~~~~~~~~~~~~~l~---------~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~ 166 (248)
T PF06977_consen 96 DTTSLDRADVQKISLG---------FPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDD 166 (248)
T ss_dssp --TT--EEEEEEEE------------S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-H
T ss_pred cccccchhhceEEecc---------cccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccc
Confidence 222111 000011 01223346799999999999999866543 5777765 2222222211
Q ss_pred -CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee--------CCCCCceEEEEecCCCEEEEEeCCCC
Q psy13635 216 -TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK--------DRLGWPNGITLDVDNEKLYWCDAKTD 286 (357)
Q Consensus 216 -~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~--------~~l~~P~giaid~~~~~lY~~d~~~~ 286 (357)
..+..|.++++||.+|.||+..... .+|...+.+|......-- ..+.+|-|||+| .+|+||++.. -+
T Consensus 167 ~~~~~d~S~l~~~p~t~~lliLS~es--~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d-~~G~LYIvsE-pN 242 (248)
T PF06977_consen 167 KLFVRDLSGLSYDPRTGHLLILSDES--RLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFD-PDGNLYIVSE-PN 242 (248)
T ss_dssp T--SS---EEEEETTTTEEEEEETTT--TEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE--TT--EEEEET-TT
T ss_pred cceeccccceEEcCCCCeEEEEECCC--CeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEEC-CCCCEEEEcC-Cc
Confidence 1356799999999999999998774 599999999885544322 236789999999 6899999986 44
Q ss_pred eEEEE
Q psy13635 287 KIEMI 291 (357)
Q Consensus 287 ~I~~~ 291 (357)
..+++
T Consensus 243 lfy~f 247 (248)
T PF06977_consen 243 LFYRF 247 (248)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 55554
No 28
>KOG1520|consensus
Probab=99.36 E-value=2.9e-11 Score=109.76 Aligned_cols=203 Identities=15% Similarity=0.156 Sum_probs=141.7
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
+.+...+...|..+++. .++.|+|+-...+.|.+++..-+. .....+.|..... ......|-||+++..+|
T Consensus 57 E~~~fd~~~~gp~~~v~-dg~il~~~g~~~Gwv~~~~~~~s~----~~~~~~~~~~~~~----e~~CGRPLGl~f~~~gg 127 (376)
T KOG1520|consen 57 ESLLFDPQGGGPYTGVV-DGRILKYTGNDDGWVKFADTKDST----NRSQCCDPGSFET----EPLCGRPLGIRFDKKGG 127 (376)
T ss_pred hhheecccCCCceEEEE-CCceEEEeccCceEEEEEeccccc----cccccCCCcceec----ccccCCcceEEeccCCC
Confidence 44555555566666666 477789998878888777653110 0111111111111 22346899999999999
Q ss_pred eEEEEeCCCCeEEEEEcCCCceEEEecC----CCCCceEEEEeCCCCEEEEEeCCCC---------------CCeEEEEe
Q psy13635 189 NLYWTDTGTDRIEVCRLEGTHRKVLVNT----DLVEPRAITLSPAHGYLFWSDWNEK---------------RPKIERSL 249 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g~~~~~~~~~----~~~~P~giavd~~~g~Ly~~d~~~~---------------~~~I~~~~ 249 (357)
.||++|... -++++++.|...+.+... .+...+++.|++ +|.+||||+... .+++.+.+
T Consensus 128 dL~VaDAYl-GL~~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~-~g~vyFTDSSsk~~~rd~~~a~l~g~~~GRl~~YD 205 (376)
T KOG1520|consen 128 DLYVADAYL-GLLKVGPEGGLAELLADEAEGKPFKFLNDLDIDP-EGVVYFTDSSSKYDRRDFVFAALEGDPTGRLFRYD 205 (376)
T ss_pred eEEEEecce-eeEEECCCCCcceeccccccCeeeeecCceeEcC-CCeEEEeccccccchhheEEeeecCCCccceEEec
Confidence 999999975 488899998876555543 244568999998 899999998753 35666666
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe--EEEecCC-CCceEEEEEEC-CEEEEEe
Q psy13635 250 LNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR--RELINEN-LPHVFGISLLG-DYVYWTD 323 (357)
Q Consensus 250 ~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~--~~i~~~~-~~~p~gia~~~-~~ly~td 323 (357)
......+++ ..++..|+|+++.+++..+.+++....+|.++-+.|... .++..++ -..|..|..++ |+.|++-
T Consensus 206 ~~tK~~~VL-ld~L~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~g~k~gt~EvFa~~LPG~PDNIR~~~~G~fWVal 282 (376)
T KOG1520|consen 206 PSTKVTKVL-LDGLYFPNGLALSPDGSFVLVAETTTARIKRYWIKGPKAGTSEVFAEGLPGYPDNIRRDSTGHFWVAL 282 (376)
T ss_pred Ccccchhhh-hhcccccccccCCCCCCEEEEEeeccceeeeeEecCCccCchhhHhhcCCCCCcceeECCCCCEEEEE
Confidence 554444444 478999999999999999999999999999999888654 2333443 45899999985 6666665
No 29
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=99.32 E-value=2e-09 Score=93.15 Aligned_cols=258 Identities=12% Similarity=0.067 Sum_probs=179.5
Q ss_pred CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCC
Q psy13635 50 KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE 129 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~ 129 (357)
+.|-+.|...++..+..+..-..|++|.+.+ ++..|++|... .|.|++....+..+........-.+-+...+|+ .+
T Consensus 83 gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gp-dg~~Witd~~~-aI~R~dpkt~evt~f~lp~~~a~~nlet~vfD~-~G 159 (353)
T COG4257 83 GAIGHLDPATGEVETYPLGSGASPHGIVVGP-DGSAWITDTGL-AIGRLDPKTLEVTRFPLPLEHADANLETAVFDP-WG 159 (353)
T ss_pred ccceecCCCCCceEEEecCCCCCCceEEECC-CCCeeEecCcc-eeEEecCcccceEEeecccccCCCcccceeeCC-Cc
Confidence 4466777766666777778888999999998 67789999877 899998865541111112223334556778995 78
Q ss_pred eEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCc
Q psy13635 130 KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTH 209 (357)
Q Consensus 130 ~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~ 209 (357)
+|+++.. .+--.|.+.-....++.- .-+...|+||.+.+ +|.+|++....+.|-++|+-...
T Consensus 160 ~lWFt~q-~G~yGrLdPa~~~i~vfp----------------aPqG~gpyGi~atp-dGsvwyaslagnaiaridp~~~~ 221 (353)
T COG4257 160 NLWFTGQ-IGAYGRLDPARNVISVFP----------------APQGGGPYGICATP-DGSVWYASLAGNAIARIDPFAGH 221 (353)
T ss_pred cEEEeec-cccceecCcccCceeeec----------------cCCCCCCcceEECC-CCcEEEEeccccceEEcccccCC
Confidence 8999886 333335554444444331 11335899999984 67899998888899999876544
Q ss_pred eEEEec-CC-CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEE-eeCCCCCceEEEEecCCCEEEEEeCCCC
Q psy13635 210 RKVLVN-TD-LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLL-VKDRLGWPNGITLDVDNEKLYWCDAKTD 286 (357)
Q Consensus 210 ~~~~~~-~~-~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~-~~~~l~~P~giaid~~~~~lY~~d~~~~ 286 (357)
.+++.. .. -+.-+.+-.||. |+++.+++++ +++++++.....=.+. +...-.+|..+-+| .-++++.+|...+
T Consensus 222 aev~p~P~~~~~gsRriwsdpi-g~~wittwg~--g~l~rfdPs~~sW~eypLPgs~arpys~rVD-~~grVW~sea~ag 297 (353)
T COG4257 222 AEVVPQPNALKAGSRRIWSDPI-GRAWITTWGT--GSLHRFDPSVTSWIEYPLPGSKARPYSMRVD-RHGRVWLSEADAG 297 (353)
T ss_pred cceecCCCcccccccccccCcc-CcEEEeccCC--ceeeEeCcccccceeeeCCCCCCCcceeeec-cCCcEEeeccccC
Confidence 444432 22 234566888876 9999999994 6999999876553332 22334678999999 7899999999999
Q ss_pred eEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEe
Q psy13635 287 KIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 287 ~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~ 333 (357)
.|.++|......+.+ ...-.++-.+..+ .|.++.++.+...+..+.
T Consensus 298 ai~rfdpeta~ftv~-p~pr~n~gn~ql~gr~ge~W~~e~gvd~lv~~r 345 (353)
T COG4257 298 AIGRFDPETARFTVL-PIPRPNSGNIQLDGRPGELWFTEAGVDALVTTR 345 (353)
T ss_pred ceeecCcccceEEEe-cCCCCCCCceeccCCCCceeecccCcceeEEEE
Confidence 999999876555433 3345566667777 488999998877766554
No 30
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=99.30 E-value=1.1e-09 Score=103.40 Aligned_cols=202 Identities=18% Similarity=0.283 Sum_probs=134.9
Q ss_pred EEEEeCC--cCCceeEEEEcCCCeEEEEeCC------------CCEEEEEEc---CCCceE-EEEecCCCCcceeeeecc
Q psy13635 109 HNVITNG--LITPDGLAIDWLTEKLYWTDSE------------TNKLEVSSL---DGKKRK-VLYWEDIDQPRAIASYKL 170 (357)
Q Consensus 109 ~~~~~~~--~~~p~glavd~~~~~ly~td~~------------~~~I~~~~~---~g~~~~-~~~~~~~~~p~~i~~~~~ 170 (357)
.++++.. +.+|.+|++|. .++||+++.. .++|.++.- ||...+ .++
T Consensus 4 ~~l~A~~p~~~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vf--------------- 67 (367)
T TIGR02604 4 VTLFAAEPLLRNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVF--------------- 67 (367)
T ss_pred EEEEECCCccCCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEe---------------
Confidence 3444543 88999999995 7889999852 238888764 454332 233
Q ss_pred CcccccCCceEEEeCCCCeEEEEeCCCCeEEEE-EcCCC-----ceEEEecC---C----CCCceEEEEeCCCCEEEEEe
Q psy13635 171 PTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVC-RLEGT-----HRKVLVNT---D----LVEPRAITLSPAHGYLFWSD 237 (357)
Q Consensus 171 ~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~-~~~g~-----~~~~~~~~---~----~~~P~giavd~~~g~Ly~~d 237 (357)
.+.+..|.||++.+ ++ ||+++. ..|.++ +.+|. ..++++.. . ...|++++++|. |+||+++
T Consensus 68 -a~~l~~p~Gi~~~~-~G-lyV~~~--~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpD-G~LYv~~ 141 (367)
T TIGR02604 68 -AEELSMVTGLAVAV-GG-VYVATP--PDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPD-GWLYFNH 141 (367)
T ss_pred -ecCCCCccceeEec-CC-EEEeCC--CeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCC-CCEEEec
Confidence 23456799999973 55 999875 467777 44432 23344331 1 234889999985 8999987
Q ss_pred CCCC-----------------CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC--CC--
Q psy13635 238 WNEK-----------------RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD--GN-- 296 (357)
Q Consensus 238 ~~~~-----------------~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d--G~-- 296 (357)
.... .+.|+|++.+|+..+.+ ..++.+|.|+++|+ .+.+|++|...+...++..- |.
T Consensus 142 G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~-a~G~rnp~Gl~~d~-~G~l~~tdn~~~~~~~i~~~~~g~~~ 219 (367)
T TIGR02604 142 GNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVV-AHGFQNPYGHSVDS-WGDVFFCDNDDPPLCRVTPVAEGGRN 219 (367)
T ss_pred ccCCCceeccCCCccCcccccCceEEEEecCCCeEEEE-ecCcCCCccceECC-CCCEEEEccCCCceeEEccccccccc
Confidence 7310 25799999999876554 57899999999995 78999999866555544421 10
Q ss_pred ------C----------eEEE-----------------ecCCCCceEEEEEE---------CCEEEEEeCCCCeEEEEeC
Q psy13635 297 ------N----------RREL-----------------INENLPHVFGISLL---------GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 297 ------~----------~~~i-----------------~~~~~~~p~gia~~---------~~~ly~td~~~~~I~~~~~ 334 (357)
. .... .......|.|+++. .+.++++++..+.|.++..
T Consensus 220 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ap~G~~~y~g~~fp~~~~g~~fv~~~~~~~v~~~~l 299 (367)
T TIGR02604 220 GYQSFNGRRYDHADRGADHEVPTGEWRQDDRGVETVGDVAGGGTAPCGIAFYRGDALPEEYRGLLLVGDAHGQLIVRYSL 299 (367)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccCCCccccEEEEeCCCcCCHHHCCCEEeeeccCCEEEEEEe
Confidence 0 0000 00012368899886 2689999999999998875
No 31
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.26 E-value=3.8e-08 Score=92.59 Aligned_cols=293 Identities=15% Similarity=0.098 Sum_probs=167.8
Q ss_pred EEEEEe--CCcEEEEEcCCCCcceEeccCCCcE-EEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc
Q psy13635 43 MLLFAT--SKDIRIANLSRPLKPVTIIKDLEEG-AAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP 119 (357)
Q Consensus 43 ~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~-~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p 119 (357)
+++++. .+++..+|.+. .+..-.++....+ .++.+.+++..+|+++. ++.|..+++.... ....+..+ ..|
T Consensus 7 l~~V~~~~~~~v~viD~~t-~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~r-dg~vsviD~~~~~---~v~~i~~G-~~~ 80 (369)
T PF02239_consen 7 LFYVVERGSGSVAVIDGAT-NKVVARIPTGGAPHAGLKFSPDGRYLYVANR-DGTVSVIDLATGK---VVATIKVG-GNP 80 (369)
T ss_dssp EEEEEEGGGTEEEEEETTT--SEEEEEE-STTEEEEEE-TT-SSEEEEEET-TSEEEEEETTSSS---EEEEEE-S-SEE
T ss_pred EEEEEecCCCEEEEEECCC-CeEEEEEcCCCCceeEEEecCCCCEEEEEcC-CCeEEEEECCccc---EEEEEecC-CCc
Confidence 344444 46789999866 3334444444454 45677887889999975 5799999998874 23334444 369
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD 198 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~ 198 (357)
.|+++.+.++.+|+++...+.+..++...... +.+-..+... ...-..+.+|.-.+.....+++-...+
T Consensus 81 ~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~----------~~~~~Rv~aIv~s~~~~~fVv~lkd~~ 150 (369)
T PF02239_consen 81 RGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPV----------DGPESRVAAIVASPGRPEFVVNLKDTG 150 (369)
T ss_dssp EEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-T----------TTS---EEEEEE-SSSSEEEEEETTTT
T ss_pred ceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccc----------cccCCCceeEEecCCCCEEEEEEccCC
Confidence 99999999999999999999999998765433 3332111100 000012335555555555556667778
Q ss_pred eEEEEEcCCC-ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE--------------------
Q psy13635 199 RIEVCRLEGT-HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL-------------------- 257 (357)
Q Consensus 199 ~I~~~~~~g~-~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~-------------------- 257 (357)
+|..++.... ....-.-..-..|.+..+||...+++.+....+ +|..++........
T Consensus 151 ~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn--~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~ 228 (369)
T PF02239_consen 151 EIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSN--KIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPG 228 (369)
T ss_dssp EEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGT--EEEEEETTTTEEEEEEE-SSSBEETTEEEEEETT
T ss_pred eEEEEEeccccccceeeecccccccccccCcccceeeecccccc--eeEEEeeccceEEEEeeccccccccccccccCCC
Confidence 9999986643 222111123467999999998667777644432 44444433211111
Q ss_pred ----------------EeeC------------------CCCCceEEEEecCCCEEEEE---eCCCCeEEEEeCCCCCeEE
Q psy13635 258 ----------------LVKD------------------RLGWPNGITLDVDNEKLYWC---DAKTDKIEMIDFDGNNRRE 300 (357)
Q Consensus 258 ----------------~~~~------------------~l~~P~giaid~~~~~lY~~---d~~~~~I~~~~~dG~~~~~ 300 (357)
.+.. ....|..+...|.+.+||+. ....+.|..+|...-....
T Consensus 229 ~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~ 308 (369)
T PF02239_consen 229 FGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVK 308 (369)
T ss_dssp TEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE
T ss_pred cceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeE
Confidence 1110 11345677788777777776 4567789999876653322
Q ss_pred EecC-CCCceEEEEEE--CCEEEEEeCCCC-eEEEEeCccCceeEEEecccCCceeeee
Q psy13635 301 LINE-NLPHVFGISLL--GDYVYWTDWQRR-SIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 301 i~~~-~~~~p~gia~~--~~~ly~td~~~~-~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
-+.. ....+..+.+. +.++|++.|..+ +|..+|..+.+....|. +..|.|+..
T Consensus 309 ~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~--~~tP~G~f~ 365 (369)
T PF02239_consen 309 TITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP--VPTPTGKFN 365 (369)
T ss_dssp -HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE----SEEEEEE
T ss_pred EEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE--eeCCCeEec
Confidence 2211 12236667775 589999999998 99999998999999998 889988753
No 32
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=99.24 E-value=5.1e-09 Score=97.28 Aligned_cols=225 Identities=19% Similarity=0.167 Sum_probs=143.2
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEec-CCCCcceeeeeccCcccccCCceEEEeC---CCCeEE
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-DIDQPRAIASYKLPTIEVEHPDGVAVDW---VARNLY 191 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~i~~~~~~~~~~~~p~glavD~---~~~~lY 191 (357)
|++|.+|++.+. +.||+++. .++|.+++.+|.....+... ... ...-..+.|||+|+ .++.||
T Consensus 1 L~~P~~~a~~pd-G~l~v~e~-~G~i~~~~~~g~~~~~v~~~~~v~-----------~~~~~gllgia~~p~f~~n~~lY 67 (331)
T PF07995_consen 1 LNNPRSMAFLPD-GRLLVAER-SGRIWVVDKDGSLKTPVADLPEVF-----------ADGERGLLGIAFHPDFASNGYLY 67 (331)
T ss_dssp ESSEEEEEEETT-SCEEEEET-TTEEEEEETTTEECEEEEE-TTTB-----------TSTTBSEEEEEE-TTCCCC-EEE
T ss_pred CCCceEEEEeCC-CcEEEEeC-CceEEEEeCCCcCcceeccccccc-----------ccccCCcccceeccccCCCCEEE
Confidence 468999999975 89999998 89999999888763333221 110 23345778999998 468999
Q ss_pred EEeCCC--------CeEEEEEcCCC-----ceEEEec------CCCCCceEEEEeCCCCEEEEEeCCCC-----------
Q psy13635 192 WTDTGT--------DRIEVCRLEGT-----HRKVLVN------TDLVEPRAITLSPAHGYLFWSDWNEK----------- 241 (357)
Q Consensus 192 ~td~~~--------~~I~~~~~~g~-----~~~~~~~------~~~~~P~giavd~~~g~Ly~~d~~~~----------- 241 (357)
++-... .+|.+...+.. ..++++. .......+|+++|. |.||++--...
T Consensus 68 v~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpD-G~LYvs~G~~~~~~~~~~~~~~ 146 (331)
T PF07995_consen 68 VYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPD-GKLYVSVGDGGNDDNAQDPNSL 146 (331)
T ss_dssp EEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TT-SEEEEEEB-TTTGGGGCSTTSS
T ss_pred EEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCC-CcEEEEeCCCCCcccccccccc
Confidence 876632 37888777644 2223322 12345678999985 89999963221
Q ss_pred CCeEEEEecCCCc------------eEEEeeCCCCCceEEEEecCCCEEEEEeCCCC---eEEEEeCCCC----------
Q psy13635 242 RPKIERSLLNGGE------------RVLLVKDRLGWPNGITLDVDNEKLYWCDAKTD---KIEMIDFDGN---------- 296 (357)
Q Consensus 242 ~~~I~~~~~dg~~------------~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~---~I~~~~~dG~---------- 296 (357)
.++|.|++.+|+. ..+++..++.+|.++++|+..+.||.+|.+.. .|..+...+.
T Consensus 147 ~G~ilri~~dG~~p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~ 226 (331)
T PF07995_consen 147 RGKILRIDPDGSIPADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGP 226 (331)
T ss_dssp TTEEEEEETTSSB-TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSC
T ss_pred cceEEEecccCcCCCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCC
Confidence 5799999999862 33566789999999999987799999997653 4555543210
Q ss_pred ---Ce-------------EEEecCCCCceEEEEEE--------CCEEEEEeCCCCeEEEEeCccCce---eEEEecccC-
Q psy13635 297 ---NR-------------RELINENLPHVFGISLL--------GDYVYWTDWQRRSIDRVNKITGND---REVIIERSC- 348 (357)
Q Consensus 297 ---~~-------------~~i~~~~~~~p~gia~~--------~~~ly~td~~~~~I~~~~~~~g~~---~~~i~~~l~- 348 (357)
.. ..+....-..|.|+.+. .|.++++++..++|+++...++.. .+.+..+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 306 (331)
T PF07995_consen 227 KYSGPPIGDAPSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGG 306 (331)
T ss_dssp STTSS-ECTGSS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS
T ss_pred CCCCCccccccCCCCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCC
Confidence 00 00000122468899987 478999999999999998754432 333444444
Q ss_pred Cceeee
Q psy13635 349 TGVTRR 354 (357)
Q Consensus 349 ~p~~i~ 354 (357)
.|.+|.
T Consensus 307 r~~~v~ 312 (331)
T PF07995_consen 307 RPRDVA 312 (331)
T ss_dssp -EEEEE
T ss_pred CceEEE
Confidence 666765
No 33
>KOG1520|consensus
Probab=99.21 E-value=9.4e-09 Score=93.58 Aligned_cols=183 Identities=17% Similarity=0.220 Sum_probs=131.1
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCc-cee----EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEe
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNV-GSK----HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYW 156 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~-~~~----~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~ 156 (357)
+..|+|+-...+-+.++...-+.. ... ......-+..|-||+++..++.||++|.-- -+..++..|...+.+..
T Consensus 75 g~il~~~g~~~Gwv~~~~~~~s~~~~~~~~~~~~~~e~~CGRPLGl~f~~~ggdL~VaDAYl-GL~~V~p~g~~a~~l~~ 153 (376)
T KOG1520|consen 75 GRILKYTGNDDGWVKFADTKDSTNRSQCCDPGSFETEPLCGRPLGIRFDKKGGDLYVADAYL-GLLKVGPEGGLAELLAD 153 (376)
T ss_pred CceEEEeccCceEEEEEeccccccccccCCCcceecccccCCcceEEeccCCCeEEEEecce-eeEEECCCCCcceeccc
Confidence 455689887777776666521110 000 122233458899999999888999999753 47777888876555443
Q ss_pred cCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC-----------------CeEEEEEcCCCceEEEecCCCC
Q psy13635 157 EDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT-----------------DRIEVCRLEGTHRKVLVNTDLV 219 (357)
Q Consensus 157 ~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~-----------------~~I~~~~~~g~~~~~~~~~~~~ 219 (357)
.... ..+.-.+++.||+ +|.+||||+.. +|+.++|+..+..+++. .++.
T Consensus 154 ~~~G------------~~~kf~N~ldI~~-~g~vyFTDSSsk~~~rd~~~a~l~g~~~GRl~~YD~~tK~~~VLl-d~L~ 219 (376)
T KOG1520|consen 154 EAEG------------KPFKFLNDLDIDP-EGVVYFTDSSSKYDRRDFVFAALEGDPTGRLFRYDPSTKVTKVLL-DGLY 219 (376)
T ss_pred cccC------------eeeeecCceeEcC-CCeEEEeccccccchhheEEeeecCCCccceEEecCcccchhhhh-hccc
Confidence 3222 2334678999997 99999999774 46677776666666665 4789
Q ss_pred CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce---EEEeeCCCCCceEEEEecCCCEEEEEe
Q psy13635 220 EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER---VLLVKDRLGWPNGITLDVDNEKLYWCD 282 (357)
Q Consensus 220 ~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~---~~~~~~~l~~P~giaid~~~~~lY~~d 282 (357)
.|+|++++|....+.+++... .+|.|.-+.|... +.++..--..|.-|..+ .+|..+++-
T Consensus 220 F~NGlaLS~d~sfvl~~Et~~--~ri~rywi~g~k~gt~EvFa~~LPG~PDNIR~~-~~G~fWVal 282 (376)
T KOG1520|consen 220 FPNGLALSPDGSFVLVAETTT--ARIKRYWIKGPKAGTSEVFAEGLPGYPDNIRRD-STGHFWVAL 282 (376)
T ss_pred ccccccCCCCCCEEEEEeecc--ceeeeeEecCCccCchhhHhhcCCCCCcceeEC-CCCCEEEEE
Confidence 999999999999999999985 5999999988755 44443345689999998 778777765
No 34
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.20 E-value=2.5e-07 Score=83.13 Aligned_cols=251 Identities=13% Similarity=0.091 Sum_probs=164.4
Q ss_pred EEeecCCCCeEEEEEeCC----cEEEEEcCCC-CcceEec---cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEc--CC
Q psy13635 33 YALSHHVAAQMLLFATSK----DIRIANLSRP-LKPVTII---KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTF--DG 102 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~----~i~~~~~~~~-~~~~~~~---~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~--~g 102 (357)
..++.++.+..||..+.. .|..+..+.. ...+++- .....|.-+++|..+..+|.++...+.|....+ +|
T Consensus 43 tyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG 122 (346)
T COG2706 43 TYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADG 122 (346)
T ss_pred ceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCC
Confidence 334555555566666543 3544444331 3444443 233455889999999999999999998777666 44
Q ss_pred CCcceeEEEEeCCc--------CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCccc
Q psy13635 103 NNVGSKHNVITNGL--------ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIE 174 (357)
Q Consensus 103 ~~~~~~~~~~~~~~--------~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~ 174 (357)
.-......+...+. ..+...-++|.++.|+.+|-+..+|..++++-..........+ ..
T Consensus 123 ~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v-------------~~ 189 (346)
T COG2706 123 SLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEV-------------KP 189 (346)
T ss_pred ccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccccccccc-------------CC
Confidence 43111112222221 1156677898899999999999999999987433322221111 12
Q ss_pred ccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC--ceEEE-----ecC---CCCCceEEEEeCCCCEEEEEeCCCCCCe
Q psy13635 175 VEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT--HRKVL-----VNT---DLVEPRAITLSPAHGYLFWSDWNEKRPK 244 (357)
Q Consensus 175 ~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~--~~~~~-----~~~---~~~~P~giavd~~~g~Ly~~d~~~~~~~ 244 (357)
..+|.-|++.+..+..|+...-+++|.+...++. ..+.+ +.+ +-..-..|.+++.+.+||.++.+-+.-.
T Consensus 190 G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~ 269 (346)
T COG2706 190 GAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIA 269 (346)
T ss_pred CCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEE
Confidence 2479999999999999999999999998887763 22221 111 2335568899999899999999854224
Q ss_pred EEEEecCCCceEEE--eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC
Q psy13635 245 IERSLLNGGERVLL--VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 245 I~~~~~dg~~~~~~--~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~ 296 (357)
+++++.+|+....+ .......|.++.+++.++.|+++...++.|.++..|..
T Consensus 270 ~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~ 323 (346)
T COG2706 270 VFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE 323 (346)
T ss_pred EEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence 44555555544333 23456679999999999999999998888877776653
No 35
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.17 E-value=2.6e-07 Score=85.47 Aligned_cols=250 Identities=14% Similarity=0.090 Sum_probs=147.4
Q ss_pred cCCEEEEEeCC----CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeC---------CCCEEEEEEcC
Q psy13635 81 KKSMVCWTDHG----TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDS---------ETNKLEVSSLD 147 (357)
Q Consensus 81 ~~~~ly~~d~~----~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~---------~~~~I~~~~~~ 147 (357)
...++|++|.. .+.|+.++.+... ....+..+ ..|.++ +.+.++.||++.+ ..+.|.+++..
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~---v~g~i~~G-~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~ 85 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGR---VLGMTDGG-FLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQ 85 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCE---EEEEEEcc-CCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECc
Confidence 35778888887 3788888887763 23444444 479996 9999999999999 88999999986
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-CCeEEEEEcCCCceEEEecCCCCCceEEEE
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-TDRIEVCRLEGTHRKVLVNTDLVEPRAITL 226 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-~~~I~~~~~~g~~~~~~~~~~~~~P~giav 226 (357)
......-+..+ .+|++.+ ...|..+++.+.++.||+++.. .+.+.++|+.......-+... ..+.....
T Consensus 86 t~~~~~~i~~p-~~p~~~~--------~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp-~~~~vy~t 155 (352)
T TIGR02658 86 THLPIADIELP-EGPRFLV--------GTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP-DCYHIFPT 155 (352)
T ss_pred cCcEEeEEccC-CCchhhc--------cCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC-CCcEEEEe
Confidence 54432222222 3334322 2478899999999999999977 789999998865543322211 11222222
Q ss_pred eCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC---------CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 227 SPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR---------LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 227 d~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~---------l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
.+.+..+.+.| ++...+.++..+........ +.+| .+.+.+++.+|.... +.|+.+++.+..
T Consensus 156 ~e~~~~~~~~D-----g~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP---~~~~~dg~~~~vs~e-G~V~~id~~~~~ 226 (352)
T TIGR02658 156 ANDTFFMHCRD-----GSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP---AYSNKSGRLVWPTYT-GKIFQIDLSSGD 226 (352)
T ss_pred cCCccEEEeec-----CceEEEEecCCCceEEeeeeeecCCccccccCC---ceEcCCCcEEEEecC-CeEEEEecCCCc
Confidence 22211222222 23333333222111111111 2456 223334555555544 899999986653
Q ss_pred eEEE-----ecCC----CCceEE---EEEE--CCEEEEEe-C--------CCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 298 RREL-----INEN----LPHVFG---ISLL--GDYVYWTD-W--------QRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 298 ~~~i-----~~~~----~~~p~g---ia~~--~~~ly~td-~--------~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
.... +... .-.|.| +++. ++++|++. . ..+.|..+|..+++....|..+ ..|.+|.
T Consensus 227 ~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG-~~~~~ia 305 (352)
T TIGR02658 227 AKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG-HEIDSIN 305 (352)
T ss_pred ceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCC-CceeeEE
Confidence 3211 1111 113444 6665 68999953 2 2268999999888888887765 4666665
Q ss_pred e
Q psy13635 355 R 355 (357)
Q Consensus 355 ~ 355 (357)
.
T Consensus 306 v 306 (352)
T TIGR02658 306 V 306 (352)
T ss_pred E
Confidence 3
No 36
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=99.13 E-value=2.1e-07 Score=88.68 Aligned_cols=252 Identities=13% Similarity=0.090 Sum_probs=160.3
Q ss_pred cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeE----EEEe-CCcCCceeEEEEcC------CCe
Q psy13635 62 KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKH----NVIT-NGLITPDGLAIDWL------TEK 130 (357)
Q Consensus 62 ~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~----~~~~-~~~~~p~glavd~~------~~~ 130 (357)
+.+.+...+..|++|++.+ ++++|+++...++|++++.++... ... .+.. .+...+.|||++|. ++.
T Consensus 21 ~~~~va~GL~~Pw~maflP-DG~llVtER~~G~I~~v~~~~~~~-~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~ 98 (454)
T TIGR03606 21 DKKVLLSGLNKPWALLWGP-DNQLWVTERATGKILRVNPETGEV-KVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPY 98 (454)
T ss_pred EEEEEECCCCCceEEEEcC-CCeEEEEEecCCEEEEEeCCCCce-eeeecCCceeccCCCCceeeEEECCCccccCCCcE
Confidence 4556778899999999988 579999998778999998765431 011 1222 24567899999854 467
Q ss_pred EEEEeC---------CCCEEEEEEcCCC-----ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 131 LYWTDS---------ETNKLEVSSLDGK-----KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 131 ly~td~---------~~~~I~~~~~~g~-----~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
||++-+ ...+|.|+.++.. ..+.++.. +|....+.-..|++++ .|+||++-..
T Consensus 99 lYvsyt~~~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~------------lP~~~~H~GgrI~FgP-DG~LYVs~GD 165 (454)
T TIGR03606 99 VYISYTYKNGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAG------------LPAGNDHNGGRLVFGP-DGKIYYTIGE 165 (454)
T ss_pred EEEEEeccCCCCCccCCcEEEEEEecCCCCccccceEEEec------------CCCCCCcCCceEEECC-CCcEEEEECC
Confidence 898742 2468988887532 12233221 1233345566788986 5689996322
Q ss_pred C--------------------------------CeEEEEEcCCCc----------eEEEecCCCCCceEEEEeCCCCEEE
Q psy13635 197 T--------------------------------DRIEVCRLEGTH----------RKVLVNTDLVEPRAITLSPAHGYLF 234 (357)
Q Consensus 197 ~--------------------------------~~I~~~~~~g~~----------~~~~~~~~~~~P~giavd~~~g~Ly 234 (357)
. ++|.|++.||+. +..+..-++.+|.|+++|| +|.||
T Consensus 166 ~g~~~~~n~~~~~~aQ~~~~~~~~~~~d~~~~~GkILRin~DGsiP~dNPf~~g~~~eIyA~G~RNp~Gla~dp-~G~Lw 244 (454)
T TIGR03606 166 QGRNQGANFFLPNQAQHTPTQQELNGKDYHAYMGKVLRLNLDGSIPKDNPSINGVVSHIFTYGHRNPQGLAFTP-DGTLY 244 (454)
T ss_pred CCCCCcccccCcchhccccccccccccCcccCceEEEEEcCCCCCCCCCCccCCCcceEEEEeccccceeEECC-CCCEE
Confidence 1 279999999863 2234455789999999999 69999
Q ss_pred EEeCCCC-CCeEEEEec-----------------------CCCc----------------------------e-EEEee-
Q psy13635 235 WSDWNEK-RPKIERSLL-----------------------NGGE----------------------------R-VLLVK- 260 (357)
Q Consensus 235 ~~d~~~~-~~~I~~~~~-----------------------dg~~----------------------------~-~~~~~- 260 (357)
.+|.+.. .-.|.++.. .+.. . ..+..
T Consensus 245 ~~e~Gp~~~DEiN~I~~G~NYGWP~~~G~~~~~~~~~~~ys~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~P~~~~ 324 (454)
T TIGR03606 245 ASEQGPNSDDELNIIVKGGNYGWPNVAGYKDDSGYVYANYSAAANKSIKTLAQNGIPAGVPVTKESEWTAKNFVPPLKTL 324 (454)
T ss_pred EEecCCCCCcEEEEeccCCcCCCCceeecCccccccccccccccccccccccccccCcCccccccccccCccccCCceec
Confidence 9997753 112222221 1000 0 00000
Q ss_pred ---------------------CCCCCceEEEEecC--------CCEEEEEeCCCCeEEEEeCCCCC--e----EEEecCC
Q psy13635 261 ---------------------DRLGWPNGITLDVD--------NEKLYWCDAKTDKIEMIDFDGNN--R----RELINEN 305 (357)
Q Consensus 261 ---------------------~~l~~P~giaid~~--------~~~lY~~d~~~~~I~~~~~dG~~--~----~~i~~~~ 305 (357)
...-.|.|+++-.. .+.|+++--....+.++.+++.. . +.++. .
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~psiapsg~~~y~~~g~~~p~w~g~llv~~L~~~~l~r~~l~~~~~~v~~~~~~~~~-~ 403 (454)
T TIGR03606 325 YTVQDTYNYNDATCGEMTYICWPTIAPSSAYYYKGGEKGITGWENSLLIPSLKRGVIYRIKLDPDYSTVYGDAVPMFK-T 403 (454)
T ss_pred cccccccccccccccccccccCCCcCCceeEEEecCcccCcccCCCEEEEEcCCCeEEEEEecCCcceecceeEEeec-C
Confidence 01113789998421 36899999999999999997763 1 22333 2
Q ss_pred CCceEEEEEE-C-CEEEEEeCCCCeEE
Q psy13635 306 LPHVFGISLL-G-DYVYWTDWQRRSID 330 (357)
Q Consensus 306 ~~~p~gia~~-~-~~ly~td~~~~~I~ 330 (357)
......++.. + +.||++-...+.+.
T Consensus 404 ~~RiRdv~~~pDg~~iy~~td~~g~~~ 430 (454)
T TIGR03606 404 NNRYRDVIASPDGNVLYVATDNFGNVQ 430 (454)
T ss_pred CCeeEEEEECCCCCEEEEEEcCCCccc
Confidence 5577888886 3 48999655667653
No 37
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.96 E-value=2.2e-05 Score=69.36 Aligned_cols=268 Identities=11% Similarity=0.051 Sum_probs=156.8
Q ss_pred cCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC
Q psy13635 37 HHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 37 ~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
-++...+++.+. ...+...++..................+.+.+.++.|+.+. .++.|+..++.... ........
T Consensus 17 ~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~i~~~~~~~---~~~~~~~~ 92 (289)
T cd00200 17 FSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGS-SDKTIRLWDLETGE---CVRTLTGH 92 (289)
T ss_pred EcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEc-CCCeEEEEEcCccc---ceEEEecc
Confidence 344445666665 55677888866432233323333344888887665555544 46788888887643 12233333
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
...+..+++++. +.++++....+.|...++........... ....+..+++++.+. ++++..
T Consensus 93 ~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------~~~~i~~~~~~~~~~-~l~~~~ 154 (289)
T cd00200 93 TSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLRG----------------HTDWVNSVAFSPDGT-FVASSS 154 (289)
T ss_pred CCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEecc----------------CCCcEEEEEEcCcCC-EEEEEc
Confidence 345778888864 56777776678999998873332222211 112467788886644 444444
Q ss_pred CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCC
Q psy13635 196 GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDN 275 (357)
Q Consensus 196 ~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~ 275 (357)
..+.|...+...................+++++.+..++.+... +.|...++...............+..+++++.
T Consensus 155 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~- 230 (289)
T cd00200 155 QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSD---GTIKLWDLSTGKCLGTLRGHENGVNSVAFSPD- 230 (289)
T ss_pred CCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCC---CcEEEEECCCCceecchhhcCCceEEEEEcCC-
Confidence 45678888887433322222333467889999875577776653 57888887754333333222335688898854
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC-CEEEEEeCCCCeEE
Q psy13635 276 EKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLG-DYVYWTDWQRRSID 330 (357)
Q Consensus 276 ~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~-~~ly~td~~~~~I~ 330 (357)
+.++++....+.|...+.+.......+......+..+++.. +..+++-...+.|.
T Consensus 231 ~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 286 (289)
T cd00200 231 GYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIR 286 (289)
T ss_pred CcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEE
Confidence 67777766678899888864333233333333566777764 34444444445544
No 38
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.94 E-value=2.5e-06 Score=82.67 Aligned_cols=228 Identities=13% Similarity=0.085 Sum_probs=143.9
Q ss_pred eEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC--CCEEEEEEcCCCceEEEEecCCCCcceeeeeccC
Q psy13635 94 MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLP 171 (357)
Q Consensus 94 ~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~ 171 (357)
.|+.++.+|.. ...+..+-......++.+.++.|+|+... ..+|++.++++...+.+....
T Consensus 199 ~l~i~d~dG~~----~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~------------- 261 (448)
T PRK04792 199 QLMIADYDGYN----EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP------------- 261 (448)
T ss_pred EEEEEeCCCCC----ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC-------------
Confidence 56677788875 33344333344567888888889887543 457999998876654442110
Q ss_pred cccccCCceEEEeCCCCeEEEEeCCC--CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTGT--DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~~--~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
......++.+.+..|+++.... ..|+.+++++...+.+... .......+++|++..|+++........|++++
T Consensus 262 ----g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~-~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~d 336 (448)
T PRK04792 262 ----GINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRH-RAIDTEPSWHPDGKSLIFTSERGGKPQIYRVN 336 (448)
T ss_pred ----CCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccC-CCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 0112456777788887764333 3699999987766555432 23445677888877887775433236899999
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCC--CeEEEEeCCCCCeEEEecCCCC-ceEEEEEECCEEEEEeCCC
Q psy13635 250 LNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKT--DKIEMIDFDGNNRRELINENLP-HVFGISLLGDYVYWTDWQR 326 (357)
Q Consensus 250 ~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~--~~I~~~~~dG~~~~~i~~~~~~-~p~gia~~~~~ly~td~~~ 326 (357)
+++...+.+...+ ....+.++.+++..||++.... ..|+.+++++...+.+...... .| ..+.++..|+++....
T Consensus 337 l~~g~~~~Lt~~g-~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt~~~~d~~p-s~spdG~~I~~~~~~~ 414 (448)
T PRK04792 337 LASGKVSRLTFEG-EQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLTSTRLDESP-SVAPNGTMVIYSTTYQ 414 (448)
T ss_pred CCCCCEEEEecCC-CCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEccCCCCCCCc-eECCCCCEEEEEEecC
Confidence 9877665553222 2233457787888998876543 3788889888766544332222 23 4555677887766544
Q ss_pred C--eEEEEeCccCceeEEEecc
Q psy13635 327 R--SIDRVNKITGNDREVIIER 346 (357)
Q Consensus 327 ~--~I~~~~~~~g~~~~~i~~~ 346 (357)
+ .++.++. +|+....+..+
T Consensus 415 g~~~l~~~~~-~G~~~~~l~~~ 435 (448)
T PRK04792 415 GKQVLAAVSI-DGRFKARLPAG 435 (448)
T ss_pred CceEEEEEEC-CCCceEECcCC
Confidence 3 3777887 78877776543
No 39
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=98.91 E-value=1.1e-06 Score=79.88 Aligned_cols=190 Identities=24% Similarity=0.262 Sum_probs=122.9
Q ss_pred CceeEEEEcCCCeEEEEeCCC------------CEEEEEEcCCCce-EE-EEecCCCCcceeeeeccCcccccCCceEEE
Q psy13635 118 TPDGLAIDWLTEKLYWTDSET------------NKLEVSSLDGKKR-KV-LYWEDIDQPRAIASYKLPTIEVEHPDGVAV 183 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td~~~------------~~I~~~~~~g~~~-~~-~~~~~~~~p~~i~~~~~~~~~~~~p~glav 183 (357)
++.++.+| ..++||+.|.+. -+|..+++..... ++ .++..... .-...+.++|
T Consensus 2 sV~~v~iD-~~~rLWVlD~G~~~~~~~~~~~~~pKLv~~Dl~t~~li~~~~~p~~~~~------------~~s~lndl~V 68 (287)
T PF03022_consen 2 SVQRVQID-ECGRLWVLDSGRPNGLQPPKQVCPPKLVAFDLKTNQLIRRYPFPPDIAP------------PDSFLNDLVV 68 (287)
T ss_dssp -EEEEEE--TTSEEEEEE-CCHSSSSTTGHTS--EEEEEETTTTCEEEEEE--CCCS-------------TCGGEEEEEE
T ss_pred cccEEEEc-CCCCEEEEeCCCcCCCCCCCCCCCcEEEEEECCCCcEEEEEECChHHcc------------cccccceEEE
Confidence 45678899 588899999753 3788888865543 22 22222221 1235678999
Q ss_pred eCCC-----CeEEEEeCCCCeEEEEEcCC-CceEEEecCC------------------CCCceEEEEeC---CCCEEEEE
Q psy13635 184 DWVA-----RNLYWTDTGTDRIEVCRLEG-THRKVLVNTD------------------LVEPRAITLSP---AHGYLFWS 236 (357)
Q Consensus 184 D~~~-----~~lY~td~~~~~I~~~~~~g-~~~~~~~~~~------------------~~~P~giavd~---~~g~Ly~~ 236 (357)
|... +..|++|.+...|.++++.. +..+++.... .....|++++| .++.|||.
T Consensus 69 D~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~ 148 (287)
T PF03022_consen 69 DVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFH 148 (287)
T ss_dssp ECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEE
T ss_pred EccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEE
Confidence 9754 48999999988999999875 3333332211 12356888876 44689999
Q ss_pred eCCCCCCeEEEEecC----CC---------ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC----CCeE
Q psy13635 237 DWNEKRPKIERSLLN----GG---------ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG----NNRR 299 (357)
Q Consensus 237 d~~~~~~~I~~~~~d----g~---------~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG----~~~~ 299 (357)
--.+ .+++++..+ .+ ..+.+. .......|+++| .+|.||+++...+.|.+.+.++ .+..
T Consensus 149 ~lss--~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG-~k~~~s~g~~~D-~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~ 224 (287)
T PF03022_consen 149 PLSS--RKLYRVPTSVLRDPSLSDAQALASQVQDLG-DKGSQSDGMAID-PNGNLYFTDVEQNAIGCWDPDGPYTPENFE 224 (287)
T ss_dssp ETT---SEEEEEEHHHHCSTT--HHH-HHHT-EEEE-E---SECEEEEE-TTTEEEEEECCCTEEEEEETTTSB-GCCEE
T ss_pred eCCC--CcEEEEEHHHhhCccccccccccccceecc-ccCCCCceEEEC-CCCcEEEecCCCCeEEEEeCCCCcCccchh
Confidence 9774 489988853 11 112222 222466899999 5999999999999999999998 3444
Q ss_pred EEec-CC-CCceEEEEEEC---CEEEEEeC
Q psy13635 300 ELIN-EN-LPHVFGISLLG---DYVYWTDW 324 (357)
Q Consensus 300 ~i~~-~~-~~~p~gia~~~---~~ly~td~ 324 (357)
.++. .. +..|.++++++ |.||+...
T Consensus 225 ~l~~d~~~l~~pd~~~i~~~~~g~L~v~sn 254 (287)
T PF03022_consen 225 ILAQDPRTLQWPDGLKIDPEGDGYLWVLSN 254 (287)
T ss_dssp EEEE-CC-GSSEEEEEE-T--TS-EEEEE-
T ss_pred eeEEcCceeeccceeeeccccCceEEEEEC
Confidence 4544 33 78999999998 99999863
No 40
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.89 E-value=3e-06 Score=82.13 Aligned_cols=226 Identities=12% Similarity=0.075 Sum_probs=142.9
Q ss_pred cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC--CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 128 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~ 128 (357)
+|+.+|.+|. ....+...........++|++++|+|+...+ ..|+..++++.. ...+...-......++.+.+
T Consensus 199 ~l~i~d~dG~-~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~----~~~lt~~~g~~~~~~wSPDG 273 (448)
T PRK04792 199 QLMIADYDGY-NEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQV----REKVTSFPGINGAPRFSPDG 273 (448)
T ss_pred EEEEEeCCCC-CceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCC----eEEecCCCCCcCCeeECCCC
Confidence 5777888773 3344444444556678999999998875433 469999998764 33333221223457888888
Q ss_pred CeEEEEeCC--CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEEE
Q psy13635 129 EKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCR 204 (357)
Q Consensus 129 ~~ly~td~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~ 204 (357)
+.|+++... ...|+++++++...+.+.... ......++.+.++.|+++... ...|++++
T Consensus 274 ~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~-----------------~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~d 336 (448)
T PRK04792 274 KKLALVLSKDGQPEIYVVDIATKALTRITRHR-----------------AIDTEPSWHPDGKSLIFTSERGGKPQIYRVN 336 (448)
T ss_pred CEEEEEEeCCCCeEEEEEECCCCCeEECccCC-----------------CCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 889886433 346999998877655443211 123345666677788776543 34789999
Q ss_pred cCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCC
Q psy13635 205 LEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 205 ~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~ 284 (357)
+++...+.+.... ....+.+++|.+..||++........|+..++++...+.+...... ...++.+.+..|+++...
T Consensus 337 l~~g~~~~Lt~~g-~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt~~~~d--~~ps~spdG~~I~~~~~~ 413 (448)
T PRK04792 337 LASGKVSRLTFEG-EQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLTSTRLD--ESPSVAPNGTMVIYSTTY 413 (448)
T ss_pred CCCCCEEEEecCC-CCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEccCCCCC--CCceECCCCCEEEEEEec
Confidence 8866555443222 2234568898888898886643335899999988776555432221 122566778888876643
Q ss_pred C--CeEEEEeCCCCCeEEE
Q psy13635 285 T--DKIEMIDFDGNNRREL 301 (357)
Q Consensus 285 ~--~~I~~~~~dG~~~~~i 301 (357)
. ..++.++.+|...+.+
T Consensus 414 ~g~~~l~~~~~~G~~~~~l 432 (448)
T PRK04792 414 QGKQVLAAVSIDGRFKARL 432 (448)
T ss_pred CCceEEEEEECCCCceEEC
Confidence 3 3588888888876655
No 41
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.87 E-value=1.1e-05 Score=76.05 Aligned_cols=259 Identities=14% Similarity=0.083 Sum_probs=138.6
Q ss_pred EEEeecCCCCeEEEEEeC-CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 32 WYALSHHVAAQMLLFATS-KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 32 ~~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
+.....+++..++|.+++ ..|.++|+.. .+....+.....|.++++++++..+|.++...+.+..++....+.. ..
T Consensus 39 h~~~~~s~Dgr~~yv~~rdg~vsviD~~~-~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v--~~ 115 (369)
T PF02239_consen 39 HAGLKFSPDGRYLYVANRDGTVSVIDLAT-GKVVATIKVGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPV--KT 115 (369)
T ss_dssp EEEEE-TT-SSEEEEEETTSEEEEEETTS-SSEEEEEE-SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EE--EE
T ss_pred eeEEEecCCCCEEEEEcCCCeEEEEECCc-ccEEEEEecCCCcceEEEcCCCCEEEEEecCCCceeEeccccccce--ee
Confidence 333445666778888885 4689999977 3444455667789999999999999999999999999888776421 22
Q ss_pred EEeCCc------CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc-eEE-EEecCCCCcceeeeeccCcccccCCceEE
Q psy13635 111 VITNGL------ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK-RKV-LYWEDIDQPRAIASYKLPTIEVEHPDGVA 182 (357)
Q Consensus 111 ~~~~~~------~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~-~~~-~~~~~~~~p~~i~~~~~~~~~~~~p~gla 182 (357)
+-..+. ..+.+|...+......++-...++|..++..... ... .+..+ ..|.+..
T Consensus 116 I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g-----------------~~~~D~~ 178 (369)
T PF02239_consen 116 IPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVG-----------------RFPHDGG 178 (369)
T ss_dssp EE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE-------------------TTEEEEE
T ss_pred cccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeeccc-----------------ccccccc
Confidence 222111 1234555555444455566788999999875532 221 21111 3688899
Q ss_pred EeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCC---------------------------------------------
Q psy13635 183 VDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTD--------------------------------------------- 217 (357)
Q Consensus 183 vD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~--------------------------------------------- 217 (357)
+|+.+++++.+....+.|.+++.........+..+
T Consensus 179 ~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~ 258 (369)
T PF02239_consen 179 FDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYA 258 (369)
T ss_dssp E-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTB
T ss_pred cCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhc
Confidence 99888888887666667766665543332222110
Q ss_pred ---------CCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEecCCCceEEEeeC-CCCCceEEEEecCCCEEEEEeCCCC
Q psy13635 218 ---------LVEPRAITLSPAHGYLFWSDWNEK-RPKIERSLLNGGERVLLVKD-RLGWPNGITLDVDNEKLYWCDAKTD 286 (357)
Q Consensus 218 ---------~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~~dg~~~~~~~~~-~l~~P~giaid~~~~~lY~~d~~~~ 286 (357)
...|..+..+|...+||+...... ...|..++...-....-+.. .-..+..+.++..+..+|++.+..+
T Consensus 259 wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~ 338 (369)
T PF02239_consen 259 WKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGN 338 (369)
T ss_dssp TSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--T
T ss_pred CeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCC
Confidence 113344555555555555411110 24555555554322111111 1123667777777777777777766
Q ss_pred -eEEEEeCCCCCeEEEecCCCCceEEE
Q psy13635 287 -KIEMIDFDGNNRRELINENLPHVFGI 312 (357)
Q Consensus 287 -~I~~~~~dG~~~~~i~~~~~~~p~gi 312 (357)
.|..+|...-.....+. +..|.|+
T Consensus 339 ~~i~v~D~~Tl~~~~~i~--~~tP~G~ 363 (369)
T PF02239_consen 339 GAIVVYDAKTLKEKKRIP--VPTPTGK 363 (369)
T ss_dssp TEEEEEETTTTEEEEEEE----SEEEE
T ss_pred CEEEEEECCCcEEEEEEE--eeCCCeE
Confidence 77777765544433333 6677765
No 42
>KOG4499|consensus
Probab=98.87 E-value=4.7e-07 Score=76.90 Aligned_cols=205 Identities=19% Similarity=0.257 Sum_probs=119.6
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCc-ceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQP-RAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD 198 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p-~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~ 198 (357)
+|+..|..++.|||.|...+.|.|.+.........--.+ .| .+.++ |. ...|.+.++- .+.
T Consensus 18 Egp~w~~~~~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~--p~~ag~il---pv--~~~~q~~~v~-~G~---------- 79 (310)
T KOG4499|consen 18 EGPHWDVERQSLLYVDIEAGEVHRYDIEQNKVYRAKIEG--PPSAGFIL---PV--EGGPQEFAVG-CGS---------- 79 (310)
T ss_pred CCCceEEecceEEEEEeccCceehhhhhhhheEEEEEec--CcceeEEE---Ee--cCCCceEEEe-ecc----------
Confidence 778888889999999998888888665543332211110 00 01110 11 1234444433 222
Q ss_pred eEEEEEcCCCceEEE-ecCC--------CCCceEEEEeCCCCEEEEEeCCCC------CCeEEEEecCCCceEEEeeCCC
Q psy13635 199 RIEVCRLEGTHRKVL-VNTD--------LVEPRAITLSPAHGYLFWSDWNEK------RPKIERSLLNGGERVLLVKDRL 263 (357)
Q Consensus 199 ~I~~~~~~g~~~~~~-~~~~--------~~~P~giavd~~~g~Ly~~d~~~~------~~~I~~~~~dg~~~~~~~~~~l 263 (357)
+....+.||...... ..+. -.+-+.=-+||. |+-|.-..... .+...+..+-|.....+ -..+
T Consensus 80 kf~i~nwd~~~~~a~v~~t~~ev~~d~kknR~NDgkvdP~-Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i-~~~v 157 (310)
T KOG4499|consen 80 KFVIVNWDGVSESAKVYRTLFEVQPDRKKNRLNDGKVDPD-GRYYGGTMADFGDDLEPIGGELYSWLAGHQVELI-WNCV 157 (310)
T ss_pred eEEEEEcccccceeeeeeeccccCchHHhcccccCccCCC-CceeeeeeccccccccccccEEEEeccCCCceee-ehhc
Confidence 333344444322111 1110 112334446664 55554332211 11222333333333333 3567
Q ss_pred CCceEEEEecCCCEEEEEeCCCCeEEEEeCC--C---CCeEEEec------CCCCceEEEEEE-CCEEEEEeCCCCeEEE
Q psy13635 264 GWPNGITLDVDNEKLYWCDAKTDKIEMIDFD--G---NNRRELIN------ENLPHVFGISLL-GDYVYWTDWQRRSIDR 331 (357)
Q Consensus 264 ~~P~giaid~~~~~lY~~d~~~~~I~~~~~d--G---~~~~~i~~------~~~~~p~gia~~-~~~ly~td~~~~~I~~ 331 (357)
.-|+||+.|......|+.|+.+..|...+.| + ++++.+.. ..-..|.|+++| +|+||++-+..++|++
T Consensus 158 ~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~ 237 (310)
T KOG4499|consen 158 GISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQK 237 (310)
T ss_pred cCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEE
Confidence 7899999998889999999999999777643 2 34544432 123468999999 7999999999999999
Q ss_pred EeCccCceeEEEe
Q psy13635 332 VNKITGNDREVII 344 (357)
Q Consensus 332 ~~~~~g~~~~~i~ 344 (357)
+++.+|+.+..+.
T Consensus 238 ~dp~tGK~L~eik 250 (310)
T KOG4499|consen 238 VDPTTGKILLEIK 250 (310)
T ss_pred ECCCCCcEEEEEE
Confidence 9999999877663
No 43
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.87 E-value=1.8e-06 Score=76.07 Aligned_cols=198 Identities=11% Similarity=0.101 Sum_probs=136.8
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEE-EEeC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLY-WTDT 195 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY-~td~ 195 (357)
.+..++++++.++.||.+-...-.|..++.+|...+++.. ..+..|++|+.= +++.| ++|.
T Consensus 86 ~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL----------------~g~~DpE~Ieyi--g~n~fvi~dE 147 (316)
T COG3204 86 ANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPL----------------TGFSDPETIEYI--GGNQFVIVDE 147 (316)
T ss_pred ccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecc----------------cccCChhHeEEe--cCCEEEEEeh
Confidence 3478999999999999988777899999999998888754 445566666654 44444 4566
Q ss_pred CCCeEEEEEcCC--CceEE----EecCC----CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC----
Q psy13635 196 GTDRIEVCRLEG--THRKV----LVNTD----LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD---- 261 (357)
Q Consensus 196 ~~~~I~~~~~~g--~~~~~----~~~~~----~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~---- 261 (357)
...++..+..+- ..... +-.+. -..-.|+|-|+.++++|++-.... ..|+.++..-.....-...
T Consensus 148 R~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P-~~I~~~~~~~~~l~~~~~~~~~~ 226 (316)
T COG3204 148 RDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNP-IGIFEVTQSPSSLSVHASLDPTA 226 (316)
T ss_pred hcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCC-cEEEEEecCCcccccccccCccc
Confidence 666666555442 21111 10011 123469999999999999998865 6888887443222111110
Q ss_pred ----CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec--------CCCCceEEEEEE-CCEEEEEeCCCCe
Q psy13635 262 ----RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN--------ENLPHVFGISLL-GDYVYWTDWQRRS 328 (357)
Q Consensus 262 ----~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~--------~~~~~p~gia~~-~~~ly~td~~~~~ 328 (357)
-+..-.|+.+|+..+.|++-...++.+..++.+|.-+..+.- ..++++.||+.| +|.||++. ..+.
T Consensus 227 ~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIvS-EPnl 305 (316)
T COG3204 227 DRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIVS-EPNL 305 (316)
T ss_pred ccceEeeccccceecCCCCcEEEEecCCceEEEEecCCCeeeeEEeccCCCCCcccCCCcceeEECCCCCEEEEe-cCCc
Confidence 123456899999999999998889999999999976443321 247789999998 59999986 4456
Q ss_pred EEEEeC
Q psy13635 329 IDRVNK 334 (357)
Q Consensus 329 I~~~~~ 334 (357)
-+++.+
T Consensus 306 fy~F~~ 311 (316)
T COG3204 306 FYRFTP 311 (316)
T ss_pred ceeccc
Confidence 777766
No 44
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=98.87 E-value=2.9e-06 Score=75.22 Aligned_cols=225 Identities=12% Similarity=0.132 Sum_probs=147.0
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-----CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeC
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-----GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDW 185 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-----g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~ 185 (357)
.....+.+|.||++.+ ++.++++|.+++....++.+ |.....++..... -+ ...-..|.|+++..
T Consensus 17 ~tDp~L~N~WGia~~p-~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~--~~-------~~~~~~PTGiVfN~ 86 (336)
T TIGR03118 17 IVDPGLRNAWGLSYRP-GGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAP--PP-------LAAEGTPTGQVFNG 86 (336)
T ss_pred ccCccccccceeEecC-CCCEEEecCCcceEEeecCCcccccCCccceEEEecCC--CC-------CCCCCCccEEEEeC
Confidence 4456788999999997 67899999988888888776 4333222221100 00 01123577777763
Q ss_pred CCC-------------eEEEEeCCCCeEEEEEcC--CC---ceEEEecC--CCCCceEEEEeCC--CCEEEEEeCCCCCC
Q psy13635 186 VAR-------------NLYWTDTGTDRIEVCRLE--GT---HRKVLVNT--DLVEPRAITLSPA--HGYLFWSDWNEKRP 243 (357)
Q Consensus 186 ~~~-------------~lY~td~~~~~I~~~~~~--g~---~~~~~~~~--~~~~P~giavd~~--~g~Ly~~d~~~~~~ 243 (357)
..+ .||.++. ++|.--++. -. ...+++.. ....=.|+|+... ..+||-+|.. ++
T Consensus 87 ~~~F~vt~~g~~~~a~Fif~tEd--GTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~--~g 162 (336)
T TIGR03118 87 SDTFVVSGEGITGPSRFLFVTED--GTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFR--QG 162 (336)
T ss_pred CCceEEcCCCcccceeEEEEeCC--ceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccC--CC
Confidence 332 2343333 345444432 11 11122221 1234568888754 5699999998 46
Q ss_pred eEEEEecCCCceEEEeeC--------CCCCceEEEEecCCCEEEEEe-------------CCCCeEEEEeCCCCCeEEEe
Q psy13635 244 KIERSLLNGGERVLLVKD--------RLGWPNGITLDVDNEKLYWCD-------------AKTDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 244 ~I~~~~~dg~~~~~~~~~--------~l~~P~giaid~~~~~lY~~d-------------~~~~~I~~~~~dG~~~~~i~ 302 (357)
+|.+.+-.-.. ..+.. .-..|.+|.- .+++|||+= .+.+.|-.++++|...+++.
T Consensus 163 ~IDVFd~~f~~--~~~~g~F~DP~iPagyAPFnIqn--ig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~a 238 (336)
T TIGR03118 163 RIDVFKGSFRP--PPLPGSFIDPALPAGYAPFNVQN--LGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRVA 238 (336)
T ss_pred ceEEecCcccc--ccCCCCccCCCCCCCCCCcceEE--ECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEEec
Confidence 99888543221 11111 1245788876 589999974 34568999999999988886
Q ss_pred cC-CCCceEEEEEE-------CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceee
Q psy13635 303 NE-NLPHVFGISLL-------GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTR 353 (357)
Q Consensus 303 ~~-~~~~p~gia~~-------~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i 353 (357)
.. .+..|.||++. .+.|.+-+.+.++|..+|..+|+..-.+...-++|.-|
T Consensus 239 s~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i 297 (336)
T TIGR03118 239 SSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKV 297 (336)
T ss_pred cCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEe
Confidence 54 58899999982 48899999999999999998899888888877777655
No 45
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=98.84 E-value=8.3e-07 Score=84.71 Aligned_cols=172 Identities=17% Similarity=0.219 Sum_probs=117.4
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC--
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV-- 186 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~-- 186 (357)
.+++..++..|.+|++.+ .+.+|+++...++|.+++.++...+.+.. +.. +. .......+.|||++|.
T Consensus 22 ~~~va~GL~~Pw~maflP-DG~llVtER~~G~I~~v~~~~~~~~~~~~--l~~---v~----~~~ge~GLlglal~PdF~ 91 (454)
T TIGR03606 22 KKVLLSGLNKPWALLWGP-DNQLWVTERATGKILRVNPETGEVKVVFT--LPE---IV----NDAQHNGLLGLALHPDFM 91 (454)
T ss_pred EEEEECCCCCceEEEEcC-CCeEEEEEecCCEEEEEeCCCCceeeeec--CCc---ee----ccCCCCceeeEEECCCcc
Confidence 567788999999999997 67899999878999999876544332211 000 00 0112457889999844
Q ss_pred ----CCeEEEEeC---------CCCeEEEEEcCCC-----ceEEEecC----CCCCceEEEEeCCCCEEEEEeCCC----
Q psy13635 187 ----ARNLYWTDT---------GTDRIEVCRLEGT-----HRKVLVNT----DLVEPRAITLSPAHGYLFWSDWNE---- 240 (357)
Q Consensus 187 ----~~~lY~td~---------~~~~I~~~~~~g~-----~~~~~~~~----~~~~P~giavd~~~g~Ly~~d~~~---- 240 (357)
++.||++-. ...+|.|+.++.. ..++++.. ....-..|+++|+ |.||++--..
T Consensus 92 ~~~~n~~lYvsyt~~~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPD-G~LYVs~GD~g~~~ 170 (454)
T TIGR03606 92 QEKGNPYVYISYTYKNGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPD-GKIYYTIGEQGRNQ 170 (454)
T ss_pred ccCCCcEEEEEEeccCCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCC-CcEEEEECCCCCCC
Confidence 578999852 1457888877532 12333321 1233567999985 8999974332
Q ss_pred --------------------------CCCeEEEEecCCCc----------eEEEeeCCCCCceEEEEecCCCEEEEEeCC
Q psy13635 241 --------------------------KRPKIERSLLNGGE----------RVLLVKDRLGWPNGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 241 --------------------------~~~~I~~~~~dg~~----------~~~~~~~~l~~P~giaid~~~~~lY~~d~~ 284 (357)
..++|.|++.||+. +.+++..++.+|.|+++|+ +++||.+|.+
T Consensus 171 ~~n~~~~~~aQ~~~~~~~~~~~d~~~~~GkILRin~DGsiP~dNPf~~g~~~eIyA~G~RNp~Gla~dp-~G~Lw~~e~G 249 (454)
T TIGR03606 171 GANFFLPNQAQHTPTQQELNGKDYHAYMGKVLRLNLDGSIPKDNPSINGVVSHIFTYGHRNPQGLAFTP-DGTLYASEQG 249 (454)
T ss_pred cccccCcchhccccccccccccCcccCceEEEEEcCCCCCCCCCCccCCCcceEEEEeccccceeEECC-CCCEEEEecC
Confidence 13589999999863 3467788999999999997 8999999965
Q ss_pred C---CeEEEEe
Q psy13635 285 T---DKIEMID 292 (357)
Q Consensus 285 ~---~~I~~~~ 292 (357)
. ..|.++.
T Consensus 250 p~~~DEiN~I~ 260 (454)
T TIGR03606 250 PNSDDELNIIV 260 (454)
T ss_pred CCCCcEEEEec
Confidence 5 3455554
No 46
>PF00058 Ldl_recept_b: Low-density lipoprotein receptor repeat class B; InterPro: IPR000033 The low-density lipoprotein receptor (LDLR) is the major cholesterol-carrying lipoprotein of plasma, acting to regulate cholesterol homeostasis in mammalian cells. The LDL receptor binds LDL and transports it into cells by acidic endocytosis. In order to be internalized, the receptor-ligand complex must first cluster into clathrin-coated pits. Once inside the cell, the LDLR separates from its ligand, which is degraded in the lysosomes, while the receptor returns to the cell surface []. The internal dissociation of the LDLR with its ligand is mediated by proton pumps within the walls of the endosome that lower the pH. The LDLR is a multi-domain protein, containing: The ligand-binding domain contains seven or eight 40-amino acid LDLR class A (cysteine-rich) repeats, each of which contains a coordinated calcium ion and six cysteine residues involved in disulphide bond formation []. Similar domains have been found in other extracellular and membrane proteins []. The second conserved region contains two EGF repeats, followed by six LDLR class B (YWTD) repeats, and another EGF repeat. The LDLR class B repeats each contain a conserved YWTD motif, and is predicted to form a beta-propeller structure []. This region is critical for ligand release and recycling of the receptor []. The third domain is rich in serine and threonine residues and contains clustered O-linked carbohydrate chains. The fourth domain is the hydrophobic transmembrane region. The fifth domain is the cytoplasmic tail that directs the receptor to clathrin-coated pits. LDLR is closely related in structure to several other receptors, including LRP1, LRP1b, megalin/LRP2, VLDL receptor, lipoprotein receptor, MEGF7/LRP4, and LRP8/apolipoprotein E receptor2); these proteins participate in a wide range of physiological processes, including the regulation of lipid metabolism, protection against atherosclerosis, neurodevelopment, and transport of nutrients and vitamins []. This entry represents the LDLR classB (YWTD) repeat, the structure of which has been solved []. The six YWTD repeats together fold into a six-bladed beta-propeller. Each blade of the propeller consists of four antiparallel beta-strands; the innermost strand of each blade is labeled 1 and the outermost strand, 4. The sequence repeats are offset with respect to the blades of the propeller, such that any given 40-residue YWTD repeat spans strands 24 of one propeller blade and strand 1 of the subsequent blade. This offset ensures circularization of the propeller because the last strand of the final sequence repeat acts as an innermost strand 1 of the blade that harbors strands 24 from the first sequence repeat. The repeat is found in a variety of proteins that include, vitellogenin receptor from Drosophila melanogaster, low-density lipoprotein (LDL) receptor [], preproepidermal growth factor, and nidogen (entactin).; PDB: 3S2K_A 3S8Z_A 3S8V_B 4A0P_A 3SOB_B 3S94_B 4DG6_A 3SOV_A 3SOQ_A 1NPE_A ....
Probab=98.84 E-value=1.6e-08 Score=63.48 Aligned_cols=41 Identities=34% Similarity=0.706 Sum_probs=39.0
Q ss_pred CeEEEEeCCCC-eEEEEEcCCCceEEEecCCCCCceEEEEeC
Q psy13635 188 RNLYWTDTGTD-RIEVCRLEGTHRKVLVNTDLVEPRAITLSP 228 (357)
Q Consensus 188 ~~lY~td~~~~-~I~~~~~~g~~~~~~~~~~~~~P~giavd~ 228 (357)
++|||+|...+ +|++++++|+.+++++...+..|.|||+|+
T Consensus 1 ~~iYWtD~~~~~~I~~a~~dGs~~~~vi~~~l~~P~giaVD~ 42 (42)
T PF00058_consen 1 GKIYWTDWSQDPSIERANLDGSNRRTVISDDLQHPEGIAVDW 42 (42)
T ss_dssp TEEEEEETTTTEEEEEEETTSTSEEEEEESSTSSEEEEEEET
T ss_pred CEEEEEECCCCcEEEEEECCCCCeEEEEECCCCCcCEEEECC
Confidence 58999999999 999999999999999999999999999995
No 47
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.83 E-value=1.9e-05 Score=75.71 Aligned_cols=237 Identities=12% Similarity=0.038 Sum_probs=148.9
Q ss_pred CCEEEEEeC-C--CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCe-EEEEeCC--CCEEEEEEcCCCceEEEE
Q psy13635 82 KSMVCWTDH-G--TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK-LYWTDSE--TNKLEVSSLDGKKRKVLY 155 (357)
Q Consensus 82 ~~~ly~~d~-~--~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~-ly~td~~--~~~I~~~~~~g~~~~~~~ 155 (357)
+..+|++.. . ...|+.++.+|.+ .+.+...+ .-......+.++. +|++... ...|++.++.+...+.+.
T Consensus 155 ~r~~~v~~~~~~~~~~l~~~d~dg~~---~~~~~~~~--~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt 229 (419)
T PRK04043 155 KRKVVFSKYTGPKKSNIVLADYTLTY---QKVIVKGG--LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA 229 (419)
T ss_pred eeEEEEEEccCCCcceEEEECCCCCc---eeEEccCC--CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe
Confidence 467788763 2 3589999999986 23333332 2345667776774 7776543 568999999887766664
Q ss_pred ecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEE
Q psy13635 156 WEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYL 233 (357)
Q Consensus 156 ~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~L 233 (357)
... + .....++.|.+++|.++... ...|+.+++++...+.+..... .-..-.++|++.+|
T Consensus 230 ~~~---------------g--~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~-~d~~p~~SPDG~~I 291 (419)
T PRK04043 230 SSQ---------------G--MLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPG-IDVNGNFVEDDKRI 291 (419)
T ss_pred cCC---------------C--cEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCC-ccCccEECCCCCEE
Confidence 211 0 01123455566677766443 3489999988876666544321 11233688887788
Q ss_pred EEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCC--------CeEEEEeCCCCCeEEEecCC
Q psy13635 234 FWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKT--------DKIEMIDFDGNNRRELINEN 305 (357)
Q Consensus 234 y~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~--------~~I~~~~~dG~~~~~i~~~~ 305 (357)
|++........|++.+++++..+.+...+... ..++++++.|.++.... ..|+.+++++...+.+....
T Consensus 292 ~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~~---~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~~~ 368 (419)
T PRK04043 292 VFVSDRLGYPNIFMKKLNSGSVEQVVFHGKNN---SSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTANG 368 (419)
T ss_pred EEEECCCCCceEEEEECCCCCeEeCccCCCcC---ceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCCCC
Confidence 88875543469999999988776665443333 26777888887665432 48999999887776655432
Q ss_pred CCceEEEEEECCEEEEEeCCC--CeEEEEeCccCceeEEEec
Q psy13635 306 LPHVFGISLLGDYVYWTDWQR--RSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 306 ~~~p~gia~~~~~ly~td~~~--~~I~~~~~~~g~~~~~i~~ 345 (357)
....-..+.++..|+++.... ..+..++. +|.....+..
T Consensus 369 ~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l-~g~~~~~l~~ 409 (419)
T PRK04043 369 VNQFPRFSSDGGSIMFIKYLGNQSALGIIRL-NYNKSFLFPL 409 (419)
T ss_pred CcCCeEECCCCCEEEEEEccCCcEEEEEEec-CCCeeEEeec
Confidence 222233555677777765433 34788888 6776665543
No 48
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.83 E-value=9.1e-06 Score=78.64 Aligned_cols=227 Identities=10% Similarity=0.061 Sum_probs=146.2
Q ss_pred CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC--CCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC
Q psy13635 50 KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH--GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 127 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~ 127 (357)
.+|+.+|.++ .....+...........+.+++.+|+++.. ....|+..++.+.. ...+...-....+.++.+.
T Consensus 182 ~~l~~~d~dg-~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~----~~~l~~~~g~~~~~~~SPD 256 (435)
T PRK05137 182 KRLAIMDQDG-ANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQ----RELVGNFPGMTFAPRFSPD 256 (435)
T ss_pred eEEEEECCCC-CCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCc----EEEeecCCCcccCcEECCC
Confidence 3688888877 344445455556778889998888877654 34579999998764 3333322223356778888
Q ss_pred CCeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEE
Q psy13635 128 TEKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVC 203 (357)
Q Consensus 128 ~~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~ 203 (357)
++.|+++-. +...|+++++++...+.+.... ......++.+.+..|+++... ...|+++
T Consensus 257 G~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~-----------------~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~ 319 (435)
T PRK05137 257 GRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSP-----------------AIDTSPSYSPDGSQIVFESDRSGSPQLYVM 319 (435)
T ss_pred CCEEEEEEecCCCceEEEEECCCCceEEccCCC-----------------CccCceeEcCCCCEEEEEECCCCCCeEEEE
Confidence 888877643 3457999998877655543211 112334666667777665432 3479999
Q ss_pred EcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC
Q psy13635 204 RLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA 283 (357)
Q Consensus 204 ~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~ 283 (357)
+.+|...+.+.... ..-...+++|.+..|+++.......+|+..++++...+.+... ......++.+++..|+++-.
T Consensus 320 d~~g~~~~~lt~~~-~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~lt~~--~~~~~p~~spDG~~i~~~~~ 396 (435)
T PRK05137 320 NADGSNPRRISFGG-GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERILTSG--FLVEGPTWAPNGRVIMFFRQ 396 (435)
T ss_pred ECCCCCeEEeecCC-CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCceEeccCC--CCCCCCeECCCCCEEEEEEc
Confidence 99887666655322 2234467888888888876543235899999988766554322 23455677777788877653
Q ss_pred CC-----CeEEEEeCCCCCeEEE
Q psy13635 284 KT-----DKIEMIDFDGNNRREL 301 (357)
Q Consensus 284 ~~-----~~I~~~~~dG~~~~~i 301 (357)
.. ..++.++++|...+.+
T Consensus 397 ~~~~~~~~~L~~~dl~g~~~~~l 419 (435)
T PRK05137 397 TPGSGGAPKLYTVDLTGRNEREV 419 (435)
T ss_pred cCCCCCcceEEEEECCCCceEEc
Confidence 22 4689999988776544
No 49
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.83 E-value=1.9e-05 Score=76.46 Aligned_cols=226 Identities=12% Similarity=0.075 Sum_probs=140.6
Q ss_pred eEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccC
Q psy13635 94 MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLP 171 (357)
Q Consensus 94 ~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~ 171 (357)
.|+.++.+|.. ...+..+-......++.+.++.|+++.. +...|++.++.+...+.+....
T Consensus 183 ~l~~~d~dg~~----~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~------------- 245 (435)
T PRK05137 183 RLAIMDQDGAN----VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFP------------- 245 (435)
T ss_pred EEEEECCCCCC----cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCC-------------
Confidence 78888888875 3444444344567788888888877653 3568999999876655443111
Q ss_pred cccccCCceEEEeCCCCeEEEEeCC--CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
......++.+.+.+|+++-.. ...|+..++++...+.+.... ......+++|+..+|+++........|+..+
T Consensus 246 ----g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~-~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d 320 (435)
T PRK05137 246 ----GMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSP-AIDTSPSYSPDGSQIVFESDRSGSPQLYVMN 320 (435)
T ss_pred ----CcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEccCCC-CccCceeEcCCCCEEEEEECCCCCCeEEEEE
Confidence 012345667667778766433 346999999887666554322 2344567888777777765332236899999
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCC--CeEEEEeCCCCCeEEEecCCCCceEEEEE--ECCEEEEEeCC
Q psy13635 250 LNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKT--DKIEMIDFDGNNRRELINENLPHVFGISL--LGDYVYWTDWQ 325 (357)
Q Consensus 250 ~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~--~~I~~~~~dG~~~~~i~~~~~~~p~gia~--~~~~ly~td~~ 325 (357)
++|...+.+.... ..-....+.++++.|+++.... ..|..++++|...+.+.... .....++ ++..|+++...
T Consensus 321 ~~g~~~~~lt~~~-~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~lt~~~--~~~~p~~spDG~~i~~~~~~ 397 (435)
T PRK05137 321 ADGSNPRRISFGG-GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERILTSGF--LVEGPTWAPNGRVIMFFRQT 397 (435)
T ss_pred CCCCCeEEeecCC-CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCceEeccCCC--CCCCCeECCCCCEEEEEEcc
Confidence 9988776665322 1223456777888888776433 47888998887665443321 2233344 46777775543
Q ss_pred C-----CeEEEEeCccCceeEEEec
Q psy13635 326 R-----RSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 326 ~-----~~I~~~~~~~g~~~~~i~~ 345 (357)
. ..++.++. +|+....+..
T Consensus 398 ~~~~~~~~L~~~dl-~g~~~~~l~~ 421 (435)
T PRK05137 398 PGSGGAPKLYTVDL-TGRNEREVPT 421 (435)
T ss_pred CCCCCcceEEEEEC-CCCceEEccC
Confidence 2 36899998 5555555543
No 50
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.82 E-value=5e-06 Score=80.40 Aligned_cols=227 Identities=12% Similarity=0.080 Sum_probs=143.5
Q ss_pred cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC--CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 128 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~ 128 (357)
.|+..|.++. ....+...-.......++++++.|+++.... ..|+..++++.. ...+...-.....+++.+.+
T Consensus 185 ~l~i~D~~g~-~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~----~~~l~~~~g~~~~~~~SpDG 259 (433)
T PRK04922 185 ALQVADSDGY-NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQ----RELVASFRGINGAPSFSPDG 259 (433)
T ss_pred EEEEECCCCC-CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCC----EEEeccCCCCccCceECCCC
Confidence 5888888773 3444444444566778899888998876543 469999998764 33332211223467888888
Q ss_pred CeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEEE
Q psy13635 129 EKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCR 204 (357)
Q Consensus 129 ~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~ 204 (357)
++|+++.. ++..|+++++++...+.+.... ......++.+.++.|+++... ...|+.++
T Consensus 260 ~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~-----------------~~~~~~~~spDG~~l~f~sd~~g~~~iy~~d 322 (433)
T PRK04922 260 RRLALTLSRDGNPEIYVMDLGSRQLTRLTNHF-----------------GIDTEPTWAPDGKSIYFTSDRGGRPQIYRVA 322 (433)
T ss_pred CEEEEEEeCCCCceEEEEECCCCCeEECccCC-----------------CCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 88877643 3457999998876654442111 112345677777777766432 23688898
Q ss_pred cCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC-
Q psy13635 205 LEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA- 283 (357)
Q Consensus 205 ~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~- 283 (357)
+++...+.+...+ ......+++|.+..|+++........|+..++++...+.+.... .....++.+++..|+++..
T Consensus 323 l~~g~~~~lt~~g-~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt~~~--~~~~p~~spdG~~i~~~s~~ 399 (433)
T PRK04922 323 ASGGSAERLTFQG-NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLTPGS--LDESPSFAPNGSMVLYATRE 399 (433)
T ss_pred CCCCCeEEeecCC-CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEECCCCC--CCCCceECCCCCEEEEEEec
Confidence 8766554444322 33456789998888988765432347999998877666543221 2233467767777777654
Q ss_pred -CCCeEEEEeCCCCCeEEEe
Q psy13635 284 -KTDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 284 -~~~~I~~~~~dG~~~~~i~ 302 (357)
+...++.++.+|...+.+.
T Consensus 400 ~g~~~L~~~~~~g~~~~~l~ 419 (433)
T PRK04922 400 GGRGVLAAVSTDGRVRQRLV 419 (433)
T ss_pred CCceEEEEEECCCCceEEcc
Confidence 3457888999887665553
No 51
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.79 E-value=4.2e-05 Score=73.39 Aligned_cols=226 Identities=10% Similarity=0.014 Sum_probs=145.8
Q ss_pred CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCE-EEEEeCC--CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEc
Q psy13635 50 KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSM-VCWTDHG--TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 126 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~-ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~ 126 (357)
.+|+.+|.+|.. ...+..+ .......+.++.++ +|++... ...|+..++.+.. ...+...-......++.+
T Consensus 169 ~~l~~~d~dg~~-~~~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~----~~~lt~~~g~~~~~~~SP 242 (419)
T PRK04043 169 SNIVLADYTLTY-QKVIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGK----KEKIASSQGMLVVSDVSK 242 (419)
T ss_pred ceEEEECCCCCc-eeEEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCc----EEEEecCCCcEEeeEECC
Confidence 478999998853 4434443 35567788888775 7776554 4679999998764 444433222223456777
Q ss_pred CCCeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC--CeEEE
Q psy13635 127 LTEKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT--DRIEV 202 (357)
Q Consensus 127 ~~~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~--~~I~~ 202 (357)
.++.|.++.. ++..|+.+++++...+.+..... .-....+.|.+++||++.... ..|++
T Consensus 243 DG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~-----------------~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~ 305 (419)
T PRK04043 243 DGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPG-----------------IDVNGNFVEDDKRIVFVSDRLGYPNIFM 305 (419)
T ss_pred CCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCC-----------------ccCccEECCCCCEEEEEECCCCCceEEE
Confidence 7878877654 34689999988876655532110 011124666677888875433 38999
Q ss_pred EEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC------CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCC
Q psy13635 203 CRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK------RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNE 276 (357)
Q Consensus 203 ~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~------~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~ 276 (357)
+++++...+.+...+... .+++|.++.|.++..... ...|+.++++++..+.+...... ...++.+++.
T Consensus 306 ~dl~~g~~~rlt~~g~~~---~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~~~~~--~~p~~SPDG~ 380 (419)
T PRK04043 306 KKLNSGSVEQVVFHGKNN---SSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTANGVN--QFPRFSSDGG 380 (419)
T ss_pred EECCCCCeEeCccCCCcC---ceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCCCCCc--CCeEECCCCC
Confidence 999987765554433222 378888888877765421 15899999998877766543322 2356777788
Q ss_pred EEEEEeC--CCCeEEEEeCCCCCeEEEec
Q psy13635 277 KLYWCDA--KTDKIEMIDFDGNNRRELIN 303 (357)
Q Consensus 277 ~lY~~d~--~~~~I~~~~~dG~~~~~i~~ 303 (357)
.|+++.. +...+..++++|.....+..
T Consensus 381 ~I~f~~~~~~~~~L~~~~l~g~~~~~l~~ 409 (419)
T PRK04043 381 SIMFIKYLGNQSALGIIRLNYNKSFLFPL 409 (419)
T ss_pred EEEEEEccCCcEEEEEEecCCCeeEEeec
Confidence 8877764 33458899999987766643
No 52
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.78 E-value=3.3e-05 Score=74.65 Aligned_cols=226 Identities=13% Similarity=0.095 Sum_probs=142.1
Q ss_pred cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC--CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 128 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~ 128 (357)
.|+.+|.+|. ....+...-.......+++++++|+++...+ ..|+..+++++. ...+...-......++.+.+
T Consensus 180 ~l~~~d~~g~-~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~----~~~l~~~~g~~~~~~~SpDG 254 (430)
T PRK00178 180 TLQRSDYDGA-RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR----REQITNFEGLNGAPAWSPDG 254 (430)
T ss_pred EEEEECCCCC-CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC----EEEccCCCCCcCCeEECCCC
Confidence 4777888874 3444444444567788999999997765433 479999998764 33332221223457788878
Q ss_pred CeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEEE
Q psy13635 129 EKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCR 204 (357)
Q Consensus 129 ~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~ 204 (357)
+.|+++-. +...|+++++++...+.+.... ......++.+.++.||++... ...|++.+
T Consensus 255 ~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~-----------------~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d 317 (430)
T PRK00178 255 SKLAFVLSKDGNPEIYVMDLASRQLSRVTNHP-----------------AIDTEPFWGKDGRTLYFTSDRGGKPQIYKVN 317 (430)
T ss_pred CEEEEEEccCCCceEEEEECCCCCeEEcccCC-----------------CCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 88887643 3347999999877655443111 112334566667778776433 23789888
Q ss_pred cCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCC
Q psy13635 205 LEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 205 ~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~ 284 (357)
+++...+.+.... ......+++|.++.|+++........|+..++++...+.+.... ......+.+.+..|+++...
T Consensus 318 ~~~g~~~~lt~~~-~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~~--~~~~p~~spdg~~i~~~~~~ 394 (430)
T PRK00178 318 VNGGRAERVTFVG-NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDTS--LDESPSVAPNGTMLIYATRQ 394 (430)
T ss_pred CCCCCEEEeecCC-CCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCCC--CCCCceECCCCCEEEEEEec
Confidence 8766555443322 22334678888889988875432347999999887666554322 11233677778888887643
Q ss_pred --CCeEEEEeCCCCCeEEE
Q psy13635 285 --TDKIEMIDFDGNNRREL 301 (357)
Q Consensus 285 --~~~I~~~~~dG~~~~~i 301 (357)
...++.++.+|...+.+
T Consensus 395 ~g~~~l~~~~~~g~~~~~l 413 (430)
T PRK00178 395 QGRGVLMLVSINGRVRLPL 413 (430)
T ss_pred CCceEEEEEECCCCceEEC
Confidence 35688888888766444
No 53
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.77 E-value=1.9e-05 Score=76.41 Aligned_cols=229 Identities=18% Similarity=0.175 Sum_probs=140.1
Q ss_pred eEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC--CCEEEEEEcCCCceEEEEecCCCCcceeeeeccC
Q psy13635 94 MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLP 171 (357)
Q Consensus 94 ~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~ 171 (357)
.|+.++.+|.. ...+..+-....+.++.+.++.|+++... ...|++.++++...+.+....
T Consensus 185 ~l~i~D~~g~~----~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~------------- 247 (433)
T PRK04922 185 ALQVADSDGYN----PQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFR------------- 247 (433)
T ss_pred EEEEECCCCCC----ceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCC-------------
Confidence 47777777764 33333333334567788888888887643 457999999876655443111
Q ss_pred cccccCCceEEEeCCCCeEEEEeCC--CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
......++.+.+++|+++... ...|+..++++...+.+... .......+++|.+..|+++........|+..+
T Consensus 248 ----g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~-~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~d 322 (433)
T PRK04922 248 ----GINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNH-FGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVA 322 (433)
T ss_pred ----CCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccC-CCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence 012245777778888776432 34799999987765554432 22334678888877777765332225899999
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCC--CeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCC--
Q psy13635 250 LNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKT--DKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQ-- 325 (357)
Q Consensus 250 ~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~--~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~-- 325 (357)
+++...+.+...+ ......++.+++..|+++.... ..|+..++++...+.+.......-...+.++..++++...
T Consensus 323 l~~g~~~~lt~~g-~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt~~~~~~~p~~spdG~~i~~~s~~~g 401 (433)
T PRK04922 323 ASGGSAERLTFQG-NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLTPGSLDESPSFAPNGSMVLYATREGG 401 (433)
T ss_pred CCCCCeEEeecCC-CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEECCCCCCCCCceECCCCCEEEEEEecCC
Confidence 9876665554332 2344578888888998876433 3688999877666544322111111333446677766543
Q ss_pred CCeEEEEeCccCceeEEEecc
Q psy13635 326 RRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 326 ~~~I~~~~~~~g~~~~~i~~~ 346 (357)
...|+.++. +|+....+..+
T Consensus 402 ~~~L~~~~~-~g~~~~~l~~~ 421 (433)
T PRK04922 402 RGVLAAVST-DGRVRQRLVSA 421 (433)
T ss_pred ceEEEEEEC-CCCceEEcccC
Confidence 346888888 67766666543
No 54
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.76 E-value=0.00012 Score=64.73 Aligned_cols=257 Identities=12% Similarity=0.075 Sum_probs=150.3
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
....++++++.++.|+.+. .++.|...++++.. ..............+.+.+.++.++ +-...+.|...+.+...
T Consensus 10 ~~i~~~~~~~~~~~l~~~~-~~g~i~i~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~i~i~~~~~~~ 84 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGS-GDGTIKVWDLETGE---LLRTLKGHTGPVRDVAASADGTYLA-SGSSDKTIRLWDLETGE 84 (289)
T ss_pred CCEEEEEEcCCCCEEEEee-cCcEEEEEEeeCCC---cEEEEecCCcceeEEEECCCCCEEE-EEcCCCeEEEEEcCccc
Confidence 4567888887656555544 46677777776553 1222222222334777876554444 44457889988887642
Q ss_pred eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCC
Q psy13635 151 RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAH 230 (357)
Q Consensus 151 ~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~ 230 (357)
........ ...+..+.+++. +.++++....+.|...++...............+..++++|.+
T Consensus 85 ~~~~~~~~----------------~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 147 (289)
T cd00200 85 CVRTLTGH----------------TSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDG 147 (289)
T ss_pred ceEEEecc----------------CCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcC
Confidence 22221110 114566777755 4566666656788888887433333333333467899999874
Q ss_pred CEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceE
Q psy13635 231 GYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVF 310 (357)
Q Consensus 231 g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~ 310 (357)
..++.+... +.|...++............-.....+++++.+..++.+.. .+.|...+................+.
T Consensus 148 ~~l~~~~~~---~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~i~ 223 (289)
T cd00200 148 TFVASSSQD---GTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSS-DGTIKLWDLSTGKCLGTLRGHENGVN 223 (289)
T ss_pred CEEEEEcCC---CcEEEEEccccccceeEecCccccceEEECCCcCEEEEecC-CCcEEEEECCCCceecchhhcCCceE
Confidence 455444423 47888887644433333333345678899865556766655 77888888865433222222233566
Q ss_pred EEEEEC-CEEEEEeCCCCeEEEEeCccCceeEEEecccCCceee
Q psy13635 311 GISLLG-DYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTR 353 (357)
Q Consensus 311 gia~~~-~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i 353 (357)
.+++.. +.++++....+.|..++..+++....+......+..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~ 267 (289)
T cd00200 224 SVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSL 267 (289)
T ss_pred EEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEE
Confidence 777764 6666666667888888876666665555333333333
No 55
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.75 E-value=3.6e-05 Score=74.38 Aligned_cols=228 Identities=14% Similarity=0.103 Sum_probs=139.6
Q ss_pred eEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC--CCEEEEEEcCCCceEEEEecCCCCcceeeeeccC
Q psy13635 94 MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLP 171 (357)
Q Consensus 94 ~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~ 171 (357)
.|+.++.+|.. ...+...-......++.+.++.|+++... ...|++.++++...+.+....
T Consensus 180 ~l~~~d~~g~~----~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~------------- 242 (430)
T PRK00178 180 TLQRSDYDGAR----AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFE------------- 242 (430)
T ss_pred EEEEECCCCCC----ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCC-------------
Confidence 47777888764 33333332334667888888888776533 357999999876655543111
Q ss_pred cccccCCceEEEeCCCCeEEEEeCC--CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
......++.+.+++|+++-.. ...|++.++++...+.+... .......+++|.+..|+++........|+..+
T Consensus 243 ----g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~-~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d 317 (430)
T PRK00178 243 ----GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNH-PAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVN 317 (430)
T ss_pred ----CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccC-CCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 012235667777788776433 23799999988766555432 22344567888877887775433236899999
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCC--CeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCC-
Q psy13635 250 LNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKT--DKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQR- 326 (357)
Q Consensus 250 ~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~--~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~- 326 (357)
+++...+.+...+ ......++.++++.|+++.... ..|+.+++++...+.+..........++.++..++++....
T Consensus 318 ~~~g~~~~lt~~~-~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~p~~spdg~~i~~~~~~~g 396 (430)
T PRK00178 318 VNGGRAERVTFVG-NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDTSLDESPSVAPNGTMLIYATRQQG 396 (430)
T ss_pred CCCCCEEEeecCC-CCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCCCCCCCceECCCCCEEEEEEecCC
Confidence 8877665554222 2223456777888998887543 36888898877665554322222123455677888876543
Q ss_pred -CeEEEEeCccCceeEEEec
Q psy13635 327 -RSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 327 -~~I~~~~~~~g~~~~~i~~ 345 (357)
..|+.++. +|+....+..
T Consensus 397 ~~~l~~~~~-~g~~~~~l~~ 415 (430)
T PRK00178 397 RGVLMLVSI-NGRVRLPLPT 415 (430)
T ss_pred ceEEEEEEC-CCCceEECcC
Confidence 45788887 6666655543
No 56
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.74 E-value=3.7e-05 Score=74.21 Aligned_cols=228 Identities=11% Similarity=0.080 Sum_probs=145.3
Q ss_pred CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC--CCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC
Q psy13635 50 KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH--GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 127 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~ 127 (357)
.+|+.+|.+|.. ...+...........++|++.+|.++.. ....|+..+++++. ...+...-.....+++.+.
T Consensus 179 ~~l~~~d~dg~~-~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~----~~~l~~~~~~~~~~~~SPD 253 (429)
T PRK03629 179 YELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA----VRQVASFPRHNGAPAFSPD 253 (429)
T ss_pred eeEEEEcCCCCC-CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC----eEEccCCCCCcCCeEECCC
Confidence 368899998843 3444444456778899999888877643 23478888888764 3333222222345789988
Q ss_pred CCeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe-CC-CCeEEEE
Q psy13635 128 TEKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD-TG-TDRIEVC 203 (357)
Q Consensus 128 ~~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td-~~-~~~I~~~ 203 (357)
++.|+++.. +...|+.+++++...+.+.... ......++.+.++.|+++. .. ...|+++
T Consensus 254 G~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~-----------------~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~ 316 (429)
T PRK03629 254 GSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR-----------------SNNTEPTWFPDSQNLAYTSDQAGRPQVYKV 316 (429)
T ss_pred CCEEEEEEcCCCCcEEEEEECCCCCEEEccCCC-----------------CCcCceEECCCCCEEEEEeCCCCCceEEEE
Confidence 889998743 3347999998876655543211 1234556777777775553 32 3479999
Q ss_pred EcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC
Q psy13635 204 RLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA 283 (357)
Q Consensus 204 ~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~ 283 (357)
++++...+.+... .......+++|.+..|+++........|+..++++...+.+.... .-....+.+++..|+++..
T Consensus 317 d~~~g~~~~lt~~-~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~~--~~~~p~~SpDG~~i~~~s~ 393 (429)
T PRK03629 317 NINGGAPQRITWE-GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDTF--LDETPSIAPNGTMVIYSSS 393 (429)
T ss_pred ECCCCCeEEeecC-CCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCCC--CCCCceECCCCCEEEEEEc
Confidence 9987666555432 233456788888778877765432357889999877666554321 1123456667777877665
Q ss_pred CC--CeEEEEeCCCCCeEEEe
Q psy13635 284 KT--DKIEMIDFDGNNRRELI 302 (357)
Q Consensus 284 ~~--~~I~~~~~dG~~~~~i~ 302 (357)
.. ..++.++.+|...+.+.
T Consensus 394 ~~~~~~l~~~~~~G~~~~~l~ 414 (429)
T PRK03629 394 QGMGSVLNLVSTDGRFKARLP 414 (429)
T ss_pred CCCceEEEEEECCCCCeEECc
Confidence 33 34778888998776653
No 57
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.74 E-value=3.3e-05 Score=74.58 Aligned_cols=239 Identities=15% Similarity=0.110 Sum_probs=140.6
Q ss_pred EEEEEeCC-CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC--CCEEEEEEcCCCceEEEEecCCC
Q psy13635 84 MVCWTDHG-TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDID 160 (357)
Q Consensus 84 ~ly~~d~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~--~~~I~~~~~~g~~~~~~~~~~~~ 160 (357)
-.|++... ...|+.++.+|.. ...+...-......++.|.++.|+++... ...|+..++++.....+....
T Consensus 166 iayv~~~~~~~~L~~~D~dG~~----~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~-- 239 (427)
T PRK02889 166 IAYVIKTGNRYQLQISDADGQN----AQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFK-- 239 (427)
T ss_pred EEEEEccCCccEEEEECCCCCC----ceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCC--
Confidence 33554332 2468888887764 22222222234467888888888877643 357999999876655443111
Q ss_pred CcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeC
Q psy13635 161 QPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDW 238 (357)
Q Consensus 161 ~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~ 238 (357)
......++.+.+++|+++-.. ...|+.++.++...+.+... .......+++|++.+|+++..
T Consensus 240 ---------------g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~-~~~~~~~~wSpDG~~l~f~s~ 303 (427)
T PRK02889 240 ---------------GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQS-SGIDTEPFFSPDGRSIYFTSD 303 (427)
T ss_pred ---------------CCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCC-CCCCcCeEEcCCCCEEEEEec
Confidence 012345677777788775332 34789999887765555432 122345678887777776643
Q ss_pred CCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCC--CeEEEEeCCCCCeEEEecCCCCceEEEEEEC
Q psy13635 239 NEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKT--DKIEMIDFDGNNRRELINENLPHVFGISLLG 316 (357)
Q Consensus 239 ~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~--~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~ 316 (357)
......|+..+.++...+.+...+ ......++.+++..|+++.... ..|+..++++...+.+...........+.++
T Consensus 304 ~~g~~~Iy~~~~~~g~~~~lt~~g-~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~~~~~~p~~spdg 382 (427)
T PRK02889 304 RGGAPQIYRMPASGGAAQRVTFTG-SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDTTRDESPSFAPNG 382 (427)
T ss_pred CCCCcEEEEEECCCCceEEEecCC-CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCCCCccCceECCCC
Confidence 222368999998876655544222 2223456777788887765433 3688889877665555432222212233456
Q ss_pred CEEEEEeCCC--CeEEEEeCccCceeEEEecc
Q psy13635 317 DYVYWTDWQR--RSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 317 ~~ly~td~~~--~~I~~~~~~~g~~~~~i~~~ 346 (357)
..|+++.... ..++.++. +|+....+..+
T Consensus 383 ~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~ 413 (427)
T PRK02889 383 RYILYATQQGGRSVLAAVSS-DGRIKQRLSVQ 413 (427)
T ss_pred CEEEEEEecCCCEEEEEEEC-CCCceEEeecC
Confidence 6776655333 33777787 67777666543
No 58
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.74 E-value=5.3e-05 Score=73.16 Aligned_cols=228 Identities=15% Similarity=0.122 Sum_probs=143.2
Q ss_pred eEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccC
Q psy13635 94 MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLP 171 (357)
Q Consensus 94 ~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~ 171 (357)
.|+.++.+|.+ ...+..+-......++.|.++.|.++.. +...|+..++++...+.+....
T Consensus 180 ~l~~~d~dg~~----~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~------------- 242 (429)
T PRK03629 180 ELRVSDYDGYN----QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP------------- 242 (429)
T ss_pred eEEEEcCCCCC----CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCC-------------
Confidence 68888888875 3334444444567889988888877643 3457888888776555443110
Q ss_pred cccccCCceEEEeCCCCeEEEEeCCC--CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTGT--DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~~--~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
......++.|.+.+|+++.... ..|+..++++...+.+.... ......+++|.+..|+++.......+|++++
T Consensus 243 ----~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~-~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d 317 (429)
T PRK03629 243 ----RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR-SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVN 317 (429)
T ss_pred ----CCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCC-CCcCceEECCCCCEEEEEeCCCCCceEEEEE
Confidence 1123467787788898874433 36999999877666554432 3456778898877776654332235899999
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCC--CCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCCC
Q psy13635 250 LNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAK--TDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQRR 327 (357)
Q Consensus 250 ~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~--~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~ 327 (357)
+++...+.+... .......++.+++..|+++... ...|+.+++++...+.+..........++-++..|+++....+
T Consensus 318 ~~~g~~~~lt~~-~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~ 396 (429)
T PRK03629 318 INGGAPQRITWE-GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDTFLDETPSIAPNGTMVIYSSSQGM 396 (429)
T ss_pred CCCCCeEEeecC-CCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCCCCCCCceECCCCCEEEEEEcCCC
Confidence 998766655432 2233456777777888776543 3468888988776655543211222234455667777664432
Q ss_pred --eEEEEeCccCceeEEEec
Q psy13635 328 --SIDRVNKITGNDREVIIE 345 (357)
Q Consensus 328 --~I~~~~~~~g~~~~~i~~ 345 (357)
.++.++. +|+....+..
T Consensus 397 ~~~l~~~~~-~G~~~~~l~~ 415 (429)
T PRK03629 397 GSVLNLVST-DGRFKARLPA 415 (429)
T ss_pred ceEEEEEEC-CCCCeEECcc
Confidence 3666777 7777766654
No 59
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=98.73 E-value=1.6e-05 Score=72.23 Aligned_cols=204 Identities=17% Similarity=0.174 Sum_probs=119.6
Q ss_pred EEEEEEEccCCEEEEEeCCC------------CeEEEEEcCCCCcceeEEEEeC----CcCCceeEEEEcCC-----CeE
Q psy13635 73 GAAIDYYYKKSMVCWTDHGT------------EMISCCTFDGNNVGSKHNVITN----GLITPDGLAIDWLT-----EKL 131 (357)
Q Consensus 73 ~~~i~~d~~~~~ly~~d~~~------------~~I~~~~~~g~~~~~~~~~~~~----~~~~p~glavd~~~-----~~l 131 (357)
..++.+|. .++||+.|.+. -+|..+++....... .-.+.. +-.....++||... +.+
T Consensus 3 V~~v~iD~-~~rLWVlD~G~~~~~~~~~~~~~pKLv~~Dl~t~~li~-~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~a 80 (287)
T PF03022_consen 3 VQRVQIDE-CGRLWVLDSGRPNGLQPPKQVCPPKLVAFDLKTNQLIR-RYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFA 80 (287)
T ss_dssp EEEEEE-T-TSEEEEEE-CCHSSSSTTGHTS--EEEEEETTTTCEEE-EEE--CCCS-TCGGEEEEEEECTTTTS-SEEE
T ss_pred ccEEEEcC-CCCEEEEeCCCcCCCCCCCCCCCcEEEEEECCCCcEEE-EEECChHHcccccccceEEEEccCCCCcceEE
Confidence 34556663 56677776542 256666666554211 111111 22345678999644 479
Q ss_pred EEEeCCCCEEEEEEcCCCceEEEEe-cCCCCcceeeeeccCcccc---cCCceEEEeC---CCCeEEEEeCCCCeEEEEE
Q psy13635 132 YWTDSETNKLEVSSLDGKKRKVLYW-EDIDQPRAIASYKLPTIEV---EHPDGVAVDW---VARNLYWTDTGTDRIEVCR 204 (357)
Q Consensus 132 y~td~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~i~~~~~~~~~~---~~p~glavD~---~~~~lY~td~~~~~I~~~~ 204 (357)
|++|.+...|.++++.......+.. .-...|...... +....+ .+..|++..+ .++.|||.-....+++++.
T Consensus 81 YItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~-i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~~ly~v~ 159 (287)
T PF03022_consen 81 YITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFT-IGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSRKLYRVP 159 (287)
T ss_dssp EEEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEE-ETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-SEEEEEE
T ss_pred EEeCCCcCcEEEEEccCCcEEEEecCCcceecccccee-ccCceEecCCCccccccCCCCCCccEEEEEeCCCCcEEEEE
Confidence 9999999999999987655544433 222333222210 001111 2356778865 4458999998888888886
Q ss_pred cC----CC---------ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC----CceEEEe-eCC-CCC
Q psy13635 205 LE----GT---------HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG----GERVLLV-KDR-LGW 265 (357)
Q Consensus 205 ~~----g~---------~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg----~~~~~~~-~~~-l~~ 265 (357)
.. .. ..+.+.. ......|+++|+ +|.||+++... ..|.+.+.++ .+...++ ... +.+
T Consensus 160 T~~L~~~~~~~~~~~~~~v~~lG~-k~~~s~g~~~D~-~G~ly~~~~~~--~aI~~w~~~~~~~~~~~~~l~~d~~~l~~ 235 (287)
T PF03022_consen 160 TSVLRDPSLSDAQALASQVQDLGD-KGSQSDGMAIDP-NGNLYFTDVEQ--NAIGCWDPDGPYTPENFEILAQDPRTLQW 235 (287)
T ss_dssp HHHHCSTT--HHH-HHHT-EEEEE----SECEEEEET-TTEEEEEECCC--TEEEEEETTTSB-GCCEEEEEE-CC-GSS
T ss_pred HHHhhCccccccccccccceeccc-cCCCCceEEECC-CCcEEEecCCC--CeEEEEeCCCCcCccchheeEEcCceeec
Confidence 32 11 1122222 124568999997 69999999995 4999999998 3444444 344 899
Q ss_pred ceEEEEecC--CCEEEEEeCC
Q psy13635 266 PNGITLDVD--NEKLYWCDAK 284 (357)
Q Consensus 266 P~giaid~~--~~~lY~~d~~ 284 (357)
|.+++++ . ++.||+....
T Consensus 236 pd~~~i~-~~~~g~L~v~snr 255 (287)
T PF03022_consen 236 PDGLKID-PEGDGYLWVLSNR 255 (287)
T ss_dssp EEEEEE--T--TS-EEEEE-S
T ss_pred cceeeec-cccCceEEEEECc
Confidence 9999998 5 7999998744
No 60
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.72 E-value=6.1e-06 Score=72.74 Aligned_cols=208 Identities=13% Similarity=0.130 Sum_probs=138.9
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEE-EEeCCCCEEEEEEcCC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLY-WTDSETNKLEVSSLDG 148 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly-~td~~~~~I~~~~~~g 148 (357)
..+..++.|++..+.||-+-...-.|..++.+|.- ..++-..+++.|++|++- +++.| ++|...+++..+..+-
T Consensus 85 ~~nvS~LTynp~~rtLFav~n~p~~iVElt~~Gdl---irtiPL~g~~DpE~Ieyi--g~n~fvi~dER~~~l~~~~vd~ 159 (316)
T COG3204 85 TANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDL---IRTIPLTGFSDPETIEYI--GGNQFVIVDERDRALYLFTVDA 159 (316)
T ss_pred cccccceeeCCCcceEEEecCCCceEEEEecCCce---EEEecccccCChhHeEEe--cCCEEEEEehhcceEEEEEEcC
Confidence 34578999999999999886666788888988874 355666789999999997 44444 5777788888877664
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC-eEEEEEcCCCceEEEecC--------CCC
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD-RIEVCRLEGTHRKVLVNT--------DLV 219 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~-~I~~~~~~g~~~~~~~~~--------~~~ 219 (357)
.......... .+.+ .-..+...+-+|+|-|+.++++|++-..+- +|+..+..-+....-... .+.
T Consensus 160 ~t~~~~~~~~-----~i~L-~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~ 233 (316)
T COG3204 160 DTTVISAKVQ-----KIPL-GTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVL 233 (316)
T ss_pred CccEEeccce-----EEec-cccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEee
Confidence 4322211110 0000 000222346789999999999999977543 677666433222111111 134
Q ss_pred CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe--------eCCCCCceEEEEecCCCEEEEEeCCCCeEEEE
Q psy13635 220 EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV--------KDRLGWPNGITLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 220 ~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~--------~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~ 291 (357)
...|+.+|+.++.|++-.... +.+..++.+|..+..+. ...+.+|.|||.| .+|.||++..- +.-+++
T Consensus 234 DvSgl~~~~~~~~LLVLS~ES--r~l~Evd~~G~~~~~lsL~~g~~gL~~dipqaEGiamD-d~g~lYIvSEP-nlfy~F 309 (316)
T COG3204 234 DVSGLEFNAITNSLLVLSDES--RRLLEVDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMD-DDGNLYIVSEP-NLFYRF 309 (316)
T ss_pred ccccceecCCCCcEEEEecCC--ceEEEEecCCCeeeeEEeccCCCCCcccCCCcceeEEC-CCCCEEEEecC-Ccceec
Confidence 567899999999888876663 59999999998655443 2246789999999 89999987643 334444
Q ss_pred e
Q psy13635 292 D 292 (357)
Q Consensus 292 ~ 292 (357)
.
T Consensus 310 ~ 310 (316)
T COG3204 310 T 310 (316)
T ss_pred c
Confidence 3
No 61
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.72 E-value=4.5e-05 Score=73.21 Aligned_cols=230 Identities=18% Similarity=0.140 Sum_probs=138.5
Q ss_pred CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC--CEEEEEEcCCCceEEEEecCCCCcceeeeecc
Q psy13635 93 EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET--NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKL 170 (357)
Q Consensus 93 ~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~--~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~ 170 (357)
..|+..+.+|.. ...+...-......++.+.++.|+|+.... ..|++.++.+.....+....
T Consensus 170 ~~l~~~d~~g~~----~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~------------ 233 (417)
T TIGR02800 170 YELQVADYDGAN----PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFP------------ 233 (417)
T ss_pred ceEEEEcCCCCC----CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCC------------
Confidence 468888887764 333332222344567888888898886543 57888888765444332110
Q ss_pred CcccccCCceEEEeCCCCeEEEEeCCC--CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEE
Q psy13635 171 PTIEVEHPDGVAVDWVARNLYWTDTGT--DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERS 248 (357)
Q Consensus 171 ~~~~~~~p~glavD~~~~~lY~td~~~--~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~ 248 (357)
......++.+.++.|+++.... ..|+..++++...+.+.... ......+++|.+.+|+++........|+.+
T Consensus 234 -----~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~ 307 (417)
T TIGR02800 234 -----GMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGP-GIDTEPSWSPDGKSIAFTSDRGGSPQIYMM 307 (417)
T ss_pred -----CCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCC-CCCCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 1223456777777888765433 37999998876555443321 122345677776778776543223589999
Q ss_pred ecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCC--CeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCC
Q psy13635 249 LLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKT--DKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQR 326 (357)
Q Consensus 249 ~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~--~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~ 326 (357)
++++...+.+... .......++.+.+..|+++.... .+|+.+++++...+.+..........++.+++.|+++....
T Consensus 308 d~~~~~~~~l~~~-~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~p~~spdg~~l~~~~~~~ 386 (417)
T TIGR02800 308 DADGGEVRRLTFR-GGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTDTGLDESPSFAPNGRMILYATTRG 386 (417)
T ss_pred ECCCCCEEEeecC-CCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccCCCCCCCceECCCCCEEEEEEeCC
Confidence 9988766555422 23445677887788888887543 47889998876554443221111113444677888876554
Q ss_pred C--eEEEEeCccCceeEEEecc
Q psy13635 327 R--SIDRVNKITGNDREVIIER 346 (357)
Q Consensus 327 ~--~I~~~~~~~g~~~~~i~~~ 346 (357)
+ .++.++. +|+....+...
T Consensus 387 ~~~~l~~~~~-~g~~~~~~~~~ 407 (417)
T TIGR02800 387 GRGVLGLVST-DGRFRARLPLG 407 (417)
T ss_pred CcEEEEEEEC-CCceeeECCCC
Confidence 3 3455554 67766666543
No 62
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=98.72 E-value=8.6e-08 Score=70.25 Aligned_cols=73 Identities=19% Similarity=0.329 Sum_probs=58.3
Q ss_pred eEEEEeCCCCEEEEEeCCCC---------------CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCC
Q psy13635 222 RAITLSPAHGYLFWSDWNEK---------------RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTD 286 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~~~---------------~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~ 286 (357)
++++|++.+|.+||||.... .+++.+.++.....+++. .++..|+|+++.+++..|++++....
T Consensus 1 ndldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~-~~L~fpNGVals~d~~~vlv~Et~~~ 79 (89)
T PF03088_consen 1 NDLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLL-DGLYFPNGVALSPDESFVLVAETGRY 79 (89)
T ss_dssp -EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEE-EEESSEEEEEE-TTSSEEEEEEGGGT
T ss_pred CceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEeh-hCCCccCeEEEcCCCCEEEEEeccCc
Confidence 47899987799999997543 589999999977666665 67999999999999999999999999
Q ss_pred eEEEEeCCC
Q psy13635 287 KIEMIDFDG 295 (357)
Q Consensus 287 ~I~~~~~dG 295 (357)
+|.+.-+.|
T Consensus 80 Ri~rywl~G 88 (89)
T PF03088_consen 80 RILRYWLKG 88 (89)
T ss_dssp EEEEEESSS
T ss_pred eEEEEEEeC
Confidence 999998877
No 63
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=98.71 E-value=2.3e-05 Score=69.64 Aligned_cols=241 Identities=15% Similarity=0.103 Sum_probs=148.6
Q ss_pred ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcC-----CCCcceeEEEEeC------CcCCceeEEEEcCCCe-
Q psy13635 63 PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD-----GNNVGSKHNVITN------GLITPDGLAIDWLTEK- 130 (357)
Q Consensus 63 ~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~-----g~~~~~~~~~~~~------~~~~p~glavd~~~~~- 130 (357)
....-+++.+++||++.+ .+.+|++|..++...-.+.+ |.. ....+... ....|.|+.+...+.-
T Consensus 15 A~~tDp~L~N~WGia~~p-~~~~WVadngT~~~TlYdg~~~~~~g~~--~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~ 91 (336)
T TIGR03118 15 AQIVDPGLRNAWGLSYRP-GGPFWVANTGTGTATLYVGNPDTQPLVQ--DPLVVVIPAPPPLAAEGTPTGQVFNGSDTFV 91 (336)
T ss_pred ccccCccccccceeEecC-CCCEEEecCCcceEEeecCCcccccCCc--cceEEEecCCCCCCCCCCccEEEEeCCCceE
Confidence 444557899999999998 56889999988877766666 332 11111111 2357999999853331
Q ss_pred ----------EEEEeCCCCEEEEEEcCCCce----E-EEEecCCCCcceeeeeccCcccccCCceEEEeCC--CCeEEEE
Q psy13635 131 ----------LYWTDSETNKLEVSSLDGKKR----K-VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV--ARNLYWT 193 (357)
Q Consensus 131 ----------ly~td~~~~~I~~~~~~g~~~----~-~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~--~~~lY~t 193 (357)
.|+..++.++|.-....-... . +++... ....--.|||+-.. ++.||.+
T Consensus 92 vt~~g~~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s--------------~~gavYkGLAi~~~~~~~~LYaa 157 (336)
T TIGR03118 92 VSGEGITGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDAS--------------QQGNVYKGLAVGPTGGGDYLYAA 157 (336)
T ss_pred EcCCCcccceeEEEEeCCceEEeecCcCCcccccccEEEEccC--------------CCcceeeeeEEeecCCCceEEEe
Confidence 011122234444433211111 1 111110 01122468888643 6799999
Q ss_pred eCCCCeEEEEEcCCCceEEEecCC--------CCCceEEEEeCCCCEEEEEeCCCC-----------CCeEEEEecCCCc
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLVNTD--------LVEPRAITLSPAHGYLFWSDWNEK-----------RPKIERSLLNGGE 254 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~~~~--------~~~P~giavd~~~g~Ly~~d~~~~-----------~~~I~~~~~dg~~ 254 (357)
|..+++|.+++-.-.. +..... --.|.+|.-- .++||++-.... .+.|...+++|.-
T Consensus 158 dF~~g~IDVFd~~f~~--~~~~g~F~DP~iPagyAPFnIqni--g~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l 233 (336)
T TIGR03118 158 NFRQGRIDVFKGSFRP--PPLPGSFIDPALPAGYAPFNVQNL--GGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQL 233 (336)
T ss_pred ccCCCceEEecCcccc--ccCCCCccCCCCCCCCCCcceEEE--CCeEEEEEEecCCcccccccCCCcceEEEEcCCCcE
Confidence 9999999998544332 222211 2356777655 699999964322 4689999999998
Q ss_pred eEEEeeC-CCCCceEEEEec-----CCCEEEEEeCCCCeEEEEeCC-CCCeEEEecCC-----CCceEEEEEEC------
Q psy13635 255 RVLLVKD-RLGWPNGITLDV-----DNEKLYWCDAKTDKIEMIDFD-GNNRRELINEN-----LPHVFGISLLG------ 316 (357)
Q Consensus 255 ~~~~~~~-~l~~P~giaid~-----~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~~~~-----~~~p~gia~~~------ 316 (357)
.+.+.+. .|..|-||++-+ ..+.|.+-+.+.++|-.+|.. |...-.+.... +....||++-.
T Consensus 234 ~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGng~~~~~ 313 (336)
T TIGR03118 234 LRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGNGVSGGS 313 (336)
T ss_pred EEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCCCcCCCC
Confidence 8877654 489999999844 578999999999999999985 65443333211 22345666642
Q ss_pred -CEEEEEeC
Q psy13635 317 -DYVYWTDW 324 (357)
Q Consensus 317 -~~ly~td~ 324 (357)
+.||++--
T Consensus 314 ~ntLyFaAG 322 (336)
T TIGR03118 314 ANYLYFTAG 322 (336)
T ss_pred cceEEEEeC
Confidence 46888753
No 64
>PF00058 Ldl_recept_b: Low-density lipoprotein receptor repeat class B; InterPro: IPR000033 The low-density lipoprotein receptor (LDLR) is the major cholesterol-carrying lipoprotein of plasma, acting to regulate cholesterol homeostasis in mammalian cells. The LDL receptor binds LDL and transports it into cells by acidic endocytosis. In order to be internalized, the receptor-ligand complex must first cluster into clathrin-coated pits. Once inside the cell, the LDLR separates from its ligand, which is degraded in the lysosomes, while the receptor returns to the cell surface []. The internal dissociation of the LDLR with its ligand is mediated by proton pumps within the walls of the endosome that lower the pH. The LDLR is a multi-domain protein, containing: The ligand-binding domain contains seven or eight 40-amino acid LDLR class A (cysteine-rich) repeats, each of which contains a coordinated calcium ion and six cysteine residues involved in disulphide bond formation []. Similar domains have been found in other extracellular and membrane proteins []. The second conserved region contains two EGF repeats, followed by six LDLR class B (YWTD) repeats, and another EGF repeat. The LDLR class B repeats each contain a conserved YWTD motif, and is predicted to form a beta-propeller structure []. This region is critical for ligand release and recycling of the receptor []. The third domain is rich in serine and threonine residues and contains clustered O-linked carbohydrate chains. The fourth domain is the hydrophobic transmembrane region. The fifth domain is the cytoplasmic tail that directs the receptor to clathrin-coated pits. LDLR is closely related in structure to several other receptors, including LRP1, LRP1b, megalin/LRP2, VLDL receptor, lipoprotein receptor, MEGF7/LRP4, and LRP8/apolipoprotein E receptor2); these proteins participate in a wide range of physiological processes, including the regulation of lipid metabolism, protection against atherosclerosis, neurodevelopment, and transport of nutrients and vitamins []. This entry represents the LDLR classB (YWTD) repeat, the structure of which has been solved []. The six YWTD repeats together fold into a six-bladed beta-propeller. Each blade of the propeller consists of four antiparallel beta-strands; the innermost strand of each blade is labeled 1 and the outermost strand, 4. The sequence repeats are offset with respect to the blades of the propeller, such that any given 40-residue YWTD repeat spans strands 24 of one propeller blade and strand 1 of the subsequent blade. This offset ensures circularization of the propeller because the last strand of the final sequence repeat acts as an innermost strand 1 of the blade that harbors strands 24 from the first sequence repeat. The repeat is found in a variety of proteins that include, vitellogenin receptor from Drosophila melanogaster, low-density lipoprotein (LDL) receptor [], preproepidermal growth factor, and nidogen (entactin).; PDB: 3S2K_A 3S8Z_A 3S8V_B 4A0P_A 3SOB_B 3S94_B 4DG6_A 3SOV_A 3SOQ_A 1NPE_A ....
Probab=98.71 E-value=8.3e-08 Score=60.20 Aligned_cols=40 Identities=43% Similarity=0.771 Sum_probs=38.1
Q ss_pred CEEEEEeCCCC-eEEEEeCCCCCeEEEecCCCCceEEEEEE
Q psy13635 276 EKLYWCDAKTD-KIEMIDFDGNNRRELINENLPHVFGISLL 315 (357)
Q Consensus 276 ~~lY~~d~~~~-~I~~~~~dG~~~~~i~~~~~~~p~gia~~ 315 (357)
++|||+|...+ +|.++++||++++.++.+.+.+|.||++|
T Consensus 1 ~~iYWtD~~~~~~I~~a~~dGs~~~~vi~~~l~~P~giaVD 41 (42)
T PF00058_consen 1 GKIYWTDWSQDPSIERANLDGSNRRTVISDDLQHPEGIAVD 41 (42)
T ss_dssp TEEEEEETTTTEEEEEEETTSTSEEEEEESSTSSEEEEEEE
T ss_pred CEEEEEECCCCcEEEEEECCCCCeEEEEECCCCCcCEEEEC
Confidence 58999999999 99999999999999999999999999997
No 65
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.71 E-value=3.2e-05 Score=74.60 Aligned_cols=227 Identities=12% Similarity=0.095 Sum_probs=140.6
Q ss_pred CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC--CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC
Q psy13635 50 KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 127 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~ 127 (357)
.+|+.+|.+|. ....+..........+++|++.+|+++...+ ..|+..++++.. ...+...-......++.+.
T Consensus 176 ~~L~~~D~dG~-~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~----~~~l~~~~g~~~~~~~SPD 250 (427)
T PRK02889 176 YQLQISDADGQ-NAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGR----RRVVANFKGSNSAPAWSPD 250 (427)
T ss_pred cEEEEECCCCC-CceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCC----EEEeecCCCCccceEECCC
Confidence 36888888773 3333334344556788999888998776433 469999998764 3333322223356788888
Q ss_pred CCeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC--CCCeEEEE
Q psy13635 128 TEKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT--GTDRIEVC 203 (357)
Q Consensus 128 ~~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~--~~~~I~~~ 203 (357)
++.|+++-. +...|+.+++++...+.+.... ......++.+.+..|+++.. +...|+.+
T Consensus 251 G~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~-----------------~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~ 313 (427)
T PRK02889 251 GRTLAVALSRDGNSQIYTVNADGSGLRRLTQSS-----------------GIDTEPFFSPDGRSIYFTSDRGGAPQIYRM 313 (427)
T ss_pred CCEEEEEEccCCCceEEEEECCCCCcEECCCCC-----------------CCCcCeEEcCCCCEEEEEecCCCCcEEEEE
Confidence 888887533 3457888888776654442111 11233456766777776543 23478888
Q ss_pred EcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC
Q psy13635 204 RLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA 283 (357)
Q Consensus 204 ~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~ 283 (357)
+.++...+.+...+ ......+++|.+..|+++........|+..++++...+.+.... ......+.+++..|+++..
T Consensus 314 ~~~~g~~~~lt~~g-~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~~--~~~~p~~spdg~~l~~~~~ 390 (427)
T PRK02889 314 PASGGAAQRVTFTG-SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDTT--RDESPSFAPNGRYILYATQ 390 (427)
T ss_pred ECCCCceEEEecCC-CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCCC--CccCceECCCCCEEEEEEe
Confidence 88776554443322 22335678888788887764422247999998877666554332 2234577777777877653
Q ss_pred C--CCeEEEEeCCCCCeEEE
Q psy13635 284 K--TDKIEMIDFDGNNRREL 301 (357)
Q Consensus 284 ~--~~~I~~~~~dG~~~~~i 301 (357)
. ...++.++.+|...+.+
T Consensus 391 ~~g~~~l~~~~~~g~~~~~l 410 (427)
T PRK02889 391 QGGRSVLAAVSSDGRIKQRL 410 (427)
T ss_pred cCCCEEEEEEECCCCceEEe
Confidence 3 33578888888766554
No 66
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.65 E-value=9.3e-05 Score=71.03 Aligned_cols=226 Identities=14% Similarity=0.118 Sum_probs=140.6
Q ss_pred cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC--CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 128 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~ 128 (357)
.|...|.++. ..+.+...-......++++++..|+|+.... ..|+..++.+.. ...+...-....++++.+.+
T Consensus 171 ~l~~~d~~g~-~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~----~~~~~~~~~~~~~~~~spDg 245 (417)
T TIGR02800 171 ELQVADYDGA-NPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ----REKVASFPGMNGAPAFSPDG 245 (417)
T ss_pred eEEEEcCCCC-CCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC----EEEeecCCCCccceEECCCC
Confidence 4788888763 3444444333466778999999999886544 478989887663 33332222234567888878
Q ss_pred CeEEEEeCC--CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEEE
Q psy13635 129 EKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCR 204 (357)
Q Consensus 129 ~~ly~td~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~ 204 (357)
+.|+++... ...|+..++++...+.+.... ......++.+.++.|+++... ...|+.++
T Consensus 246 ~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-----------------~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d 308 (417)
T TIGR02800 246 SKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGP-----------------GIDTEPSWSPDGKSIAFTSDRGGSPQIYMMD 308 (417)
T ss_pred CEEEEEECCCCCccEEEEECCCCCEEECCCCC-----------------CCCCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence 888876543 447888888776554442111 011223455556778766432 23799999
Q ss_pred cCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCC
Q psy13635 205 LEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 205 ~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~ 284 (357)
+++.....+.. ........+++|.+..|+++.......+|+.+++++...+.+.... .....++.+.++.|+++...
T Consensus 309 ~~~~~~~~l~~-~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~~--~~~~p~~spdg~~l~~~~~~ 385 (417)
T TIGR02800 309 ADGGEVRRLTF-RGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTDTG--LDESPSFAPNGRMILYATTR 385 (417)
T ss_pred CCCCCEEEeec-CCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccCCC--CCCCceECCCCCEEEEEEeC
Confidence 88766555443 2344567788988888888876533358999999876555443221 22334566677888887654
Q ss_pred C--CeEEEEeCCCCCeEEE
Q psy13635 285 T--DKIEMIDFDGNNRREL 301 (357)
Q Consensus 285 ~--~~I~~~~~dG~~~~~i 301 (357)
. ..++..+.+|.....+
T Consensus 386 ~~~~~l~~~~~~g~~~~~~ 404 (417)
T TIGR02800 386 GGRGVLGLVSTDGRFRARL 404 (417)
T ss_pred CCcEEEEEEECCCceeeEC
Confidence 3 3566667777655443
No 67
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=98.57 E-value=3.7e-05 Score=71.93 Aligned_cols=251 Identities=13% Similarity=0.116 Sum_probs=150.1
Q ss_pred cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc---eeE----------------EEEeCCcCCceeE
Q psy13635 62 KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG---SKH----------------NVITNGLITPDGL 122 (357)
Q Consensus 62 ~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~---~~~----------------~~~~~~~~~p~gl 122 (357)
....+.+.+.+|+++...+++ .+.++....+.+..+...+.... ... .....+...|.++
T Consensus 58 ~~~~~a~gLe~p~~~~~lP~G-~~~v~er~~G~l~~i~~g~~~~~~~~~~~~~~~~~~~Gll~~al~~~fa~~~~~~~~~ 136 (399)
T COG2133 58 SVEVVAQGLEHPWGLARLPDG-VLLVTERPTGRLRLISDGGSASPPVSTVPIVLLRGQGGLLDIALSPDFAQGRLVYFGI 136 (399)
T ss_pred ecccccccccCchhheecCCc-eEEEEccCCccEEEecCCCcccccccccceEEeccCCCccceEecccccccceeeeEE
Confidence 344456678899999999876 88888777666665553332110 001 1222334455555
Q ss_pred EEEcCCCeEEEEeCCCCEEEEEEcC-CCc----eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 123 AIDWLTEKLYWTDSETNKLEVSSLD-GKK----RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 123 avd~~~~~ly~td~~~~~I~~~~~~-g~~----~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
+.- .+.+|.+. ++.+..++ |.. .++++.. +|....++-..|++++.+ +||++-...
T Consensus 137 a~~--~~~~~~~n----~~~~~~~~~g~~~l~~~~~i~~~------------lP~~~~H~g~~l~f~pDG-~Lyvs~G~~ 197 (399)
T COG2133 137 SEP--GGGLYVAN----RVAIGRLPGGDTKLSEPKVIFRG------------IPKGGHHFGGRLVFGPDG-KLYVTTGSN 197 (399)
T ss_pred Eee--cCCceEEE----EEEEEEcCCCccccccccEEeec------------CCCCCCcCcccEEECCCC-cEEEEeCCC
Confidence 554 55556554 33333333 211 1222211 234445677889999766 999986554
Q ss_pred -------------CeEEEEE--------cCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC----CCeEEEEe---
Q psy13635 198 -------------DRIEVCR--------LEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK----RPKIERSL--- 249 (357)
Q Consensus 198 -------------~~I~~~~--------~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~----~~~I~~~~--- 249 (357)
++|.+.+ .++...++ ...++.+|.|++++|.+|.||.++.+.. .-.+.++.
T Consensus 198 ~~~~~aq~~~~~~Gk~~r~~~a~~~~~d~p~~~~~i-~s~G~RN~qGl~w~P~tg~Lw~~e~g~d~~~~~Deln~i~~G~ 276 (399)
T COG2133 198 GDPALAQDNVSLAGKVLRIDRAGIIPADNPFPNSEI-WSYGHRNPQGLAWHPVTGALWTTEHGPDALRGPDELNSIRPGK 276 (399)
T ss_pred CCcccccCccccccceeeeccCcccccCCCCCCcce-EEeccCCccceeecCCCCcEEEEecCCCcccCcccccccccCC
Confidence 2344443 33444333 3347889999999999999999998861 00111111
Q ss_pred ------------cCC------CceEEEeeC-----CCCCceEEEEecCC-------CEEEEEeCCCCeEEEEeCCCC---
Q psy13635 250 ------------LNG------GERVLLVKD-----RLGWPNGITLDVDN-------EKLYWCDAKTDKIEMIDFDGN--- 296 (357)
Q Consensus 250 ------------~dg------~~~~~~~~~-----~l~~P~giaid~~~-------~~lY~~d~~~~~I~~~~~dG~--- 296 (357)
.+| ......... .-..|.|+++- .+ +.+|++..+.-.+.+.+++|.
T Consensus 277 nYGWP~~~~G~~~~g~~~~~~~~~~~~~~p~~~~~~h~ApsGmaFy-~G~~fP~~r~~lfV~~hgsw~~~~~~~~g~~~~ 355 (399)
T COG2133 277 NYGWPYAYFGQNYDGRAIPDGTVVAGAIQPVYTWAPHIAPSGMAFY-TGDLFPAYRGDLFVGAHGSWPVLRLRPDGNYKV 355 (399)
T ss_pred ccCCceeccCcccCccccCCCcccccccCCceeeccccccceeEEe-cCCcCccccCcEEEEeecceeEEEeccCCCcce
Confidence 011 111111100 11246899984 33 689999988888888999998
Q ss_pred CeEEEecC-CCCceEEEEEE-CCEEEEEeCC-CCeEEEEeC
Q psy13635 297 NRRELINE-NLPHVFGISLL-GDYVYWTDWQ-RRSIDRVNK 334 (357)
Q Consensus 297 ~~~~i~~~-~~~~p~gia~~-~~~ly~td~~-~~~I~~~~~ 334 (357)
..+.++.. ....|.++++. +|.||+++-. +++|+|+..
T Consensus 356 ~~~~fl~~d~~gR~~dV~v~~DGallv~~D~~~g~i~Rv~~ 396 (399)
T COG2133 356 VLTGFLSGDLGGRPRDVAVAPDGALLVLTDQGDGRILRVSY 396 (399)
T ss_pred EEEEEEecCCCCcccceEECCCCeEEEeecCCCCeEEEecC
Confidence 33334432 23689999998 6899998877 679999986
No 68
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=98.53 E-value=7.4e-07 Score=65.36 Aligned_cols=71 Identities=25% Similarity=0.419 Sum_probs=56.9
Q ss_pred ceEEEeCCCCeEEEEeCC-----------------CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 179 DGVAVDWVARNLYWTDTG-----------------TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 179 ~glavD~~~~~lY~td~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
++++|+..+|.+||||.. ++++.+.++..+..+++.. ++..|+||++++.+..|.+++...
T Consensus 1 ndldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~~-~L~fpNGVals~d~~~vlv~Et~~- 78 (89)
T PF03088_consen 1 NDLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLLD-GLYFPNGVALSPDESFVLVAETGR- 78 (89)
T ss_dssp -EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEEE-EESSEEEEEE-TTSSEEEEEEGGG-
T ss_pred CceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEehh-CCCccCeEEEcCCCCEEEEEeccC-
Confidence 478999777999999976 3589999999988888775 689999999999999999999995
Q ss_pred CCeEEEEecCC
Q psy13635 242 RPKIERSLLNG 252 (357)
Q Consensus 242 ~~~I~~~~~dg 252 (357)
.+|.|.-+.|
T Consensus 79 -~Ri~rywl~G 88 (89)
T PF03088_consen 79 -YRILRYWLKG 88 (89)
T ss_dssp -TEEEEEESSS
T ss_pred -ceEEEEEEeC
Confidence 5999998877
No 69
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.52 E-value=0.00023 Score=68.78 Aligned_cols=234 Identities=18% Similarity=0.169 Sum_probs=138.2
Q ss_pred CEE-EEEeCCC----CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC--CCEEEEEEcCCCceEEEE
Q psy13635 83 SMV-CWTDHGT----EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE--TNKLEVSSLDGKKRKVLY 155 (357)
Q Consensus 83 ~~l-y~~d~~~----~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~--~~~I~~~~~~g~~~~~~~ 155 (357)
.+| |+++..+ ..|+..+.+|.. ...+..+-.....+++.+.++.|.++... ..+|+..++.+...+.+.
T Consensus 169 ~ria~v~~~~~~~~~~~i~i~d~dg~~----~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~ 244 (429)
T PRK01742 169 TRIAYVVQKNGGSQPYEVRVADYDGFN----QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVA 244 (429)
T ss_pred CEEEEEEEEcCCCceEEEEEECCCCCC----ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEe
Confidence 445 6655432 467777888875 33344333345778899888888887543 357988898776544442
Q ss_pred ecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC--eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEE
Q psy13635 156 WEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD--RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYL 233 (357)
Q Consensus 156 ~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~--~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~L 233 (357)
... ..-..+++.|.+..|+++....+ .|+.+++++.....+.. ........+++|.+..|
T Consensus 245 ~~~-----------------g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~-~~~~~~~~~wSpDG~~i 306 (429)
T PRK01742 245 SFR-----------------GHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTS-GAGNNTEPSWSPDGQSI 306 (429)
T ss_pred cCC-----------------CccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeecc-CCCCcCCEEECCCCCEE
Confidence 110 01124577777778887643333 68888888766655543 22345578889887777
Q ss_pred EEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEE
Q psy13635 234 FWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGIS 313 (357)
Q Consensus 234 y~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia 313 (357)
+++.......+|+..+.++.....+ ... . ...++.+++..|+++.. ..+...++.+...+.+...........+
T Consensus 307 ~f~s~~~g~~~I~~~~~~~~~~~~l-~~~-~--~~~~~SpDG~~ia~~~~--~~i~~~Dl~~g~~~~lt~~~~~~~~~~s 380 (429)
T PRK01742 307 LFTSDRSGSPQVYRMSASGGGASLV-GGR-G--YSAQISADGKTLVMING--DNVVKQDLTSGSTEVLSSTFLDESPSIS 380 (429)
T ss_pred EEEECCCCCceEEEEECCCCCeEEe-cCC-C--CCccCCCCCCEEEEEcC--CCEEEEECCCCCeEEecCCCCCCCceEC
Confidence 7765332236899999887765444 221 1 23566777788877654 4677788866554433322111212233
Q ss_pred EECCEEEEEeCCC-CeEE-EEeCccCceeEEEec
Q psy13635 314 LLGDYVYWTDWQR-RSID-RVNKITGNDREVIIE 345 (357)
Q Consensus 314 ~~~~~ly~td~~~-~~I~-~~~~~~g~~~~~i~~ 345 (357)
.++..|+++.... ..++ .++. +|+....+..
T Consensus 381 PdG~~i~~~s~~g~~~~l~~~~~-~G~~~~~l~~ 413 (429)
T PRK01742 381 PNGIMIIYSSTQGLGKVLQLVSA-DGRFKARLPG 413 (429)
T ss_pred CCCCEEEEEEcCCCceEEEEEEC-CCCceEEccC
Confidence 4456777765433 2233 3454 6777776643
No 70
>KOG4499|consensus
Probab=98.50 E-value=9e-05 Score=63.32 Aligned_cols=226 Identities=14% Similarity=0.163 Sum_probs=123.8
Q ss_pred EEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc-------eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 74 AAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG-------SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 74 ~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-------~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
.|..++...+.|||.|...+.+.|.+....... .....+......|+.-++-. ..+....+.
T Consensus 18 Egp~w~~~~~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p~~ag~ilpv~~~~q~~~v~~-----------G~kf~i~nw 86 (310)
T KOG4499|consen 18 EGPHWDVERQSLLYVDIEAGEVHRYDIEQNKVYRAKIEGPPSAGFILPVEGGPQEFAVGC-----------GSKFVIVNW 86 (310)
T ss_pred CCCceEEecceEEEEEeccCceehhhhhhhheEEEEEecCcceeEEEEecCCCceEEEee-----------cceEEEEEc
Confidence 345577778999999998776666554443200 00112222233344444432 123444455
Q ss_pred CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC---------CeEEEEEcCCCceEEEecCC
Q psy13635 147 DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT---------DRIEVCRLEGTHRKVLVNTD 217 (357)
Q Consensus 147 ~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~---------~~I~~~~~~g~~~~~~~~~~ 217 (357)
||......+...+-+- .|...-+.-++=-+||.++ -|.--... +.+++- +-|...+.+ ...
T Consensus 87 d~~~~~a~v~~t~~ev-------~~d~kknR~NDgkvdP~Gr-yy~GtMad~~~~le~~~g~Ly~~-~~~h~v~~i-~~~ 156 (310)
T KOG4499|consen 87 DGVSESAKVYRTLFEV-------QPDRKKNRLNDGKVDPDGR-YYGGTMADFGDDLEPIGGELYSW-LAGHQVELI-WNC 156 (310)
T ss_pred ccccceeeeeeecccc-------CchHHhcccccCccCCCCc-eeeeeeccccccccccccEEEEe-ccCCCceee-ehh
Confidence 5543322221110000 0001112334445665443 35432221 122222 223333333 245
Q ss_pred CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe--cCC---CceEEEeeC------CCCCceEEEEecCCCEEEEEeCCCC
Q psy13635 218 LVEPRAITLSPAHGYLFWSDWNEKRPKIERSL--LNG---GERVLLVKD------RLGWPNGITLDVDNEKLYWCDAKTD 286 (357)
Q Consensus 218 ~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~--~dg---~~~~~~~~~------~l~~P~giaid~~~~~lY~~d~~~~ 286 (357)
+.-|+||+-|.+....|+.|+-. ..|...+ ..+ +++.+++.- +-..|.|++|| .+|+||++-...+
T Consensus 157 v~IsNgl~Wd~d~K~fY~iDsln--~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID-~eG~L~Va~~ng~ 233 (310)
T KOG4499|consen 157 VGISNGLAWDSDAKKFYYIDSLN--YEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTID-TEGNLYVATFNGG 233 (310)
T ss_pred ccCCccccccccCcEEEEEccCc--eEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEc-cCCcEEEEEecCc
Confidence 67799999999989999999984 5884444 444 345555431 34569999999 6999999999999
Q ss_pred eEEEEeCC-CCCeEEEecCCCCceEEEEEEC---CEEEEEeC
Q psy13635 287 KIEMIDFD-GNNRRELINENLPHVFGISLLG---DYVYWTDW 324 (357)
Q Consensus 287 ~I~~~~~d-G~~~~~i~~~~~~~p~gia~~~---~~ly~td~ 324 (357)
+|.++++. |.-..++.- ........++-+ +-+|+|-.
T Consensus 234 ~V~~~dp~tGK~L~eikl-Pt~qitsccFgGkn~d~~yvT~a 274 (310)
T KOG4499|consen 234 TVQKVDPTTGKILLEIKL-PTPQITSCCFGGKNLDILYVTTA 274 (310)
T ss_pred EEEEECCCCCcEEEEEEc-CCCceEEEEecCCCccEEEEEeh
Confidence 99999985 444444432 234455666654 56888754
No 71
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.46 E-value=0.00072 Score=65.24 Aligned_cols=230 Identities=10% Similarity=0.047 Sum_probs=134.9
Q ss_pred CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCE--E-EEEeCC-CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEE
Q psy13635 50 KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSM--V-CWTDHG-TEMISCCTFDGNNVGSKHNVITNGLITPDGLAID 125 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~--l-y~~d~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd 125 (357)
.+|+.+|.+|.. ...+.........-.+.|++.. + |++... ...|+..+++|+. ...+...-......++.
T Consensus 165 ~~l~~~d~dG~~-~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~----~~~lt~~~g~~~~p~wS 239 (428)
T PRK01029 165 GELWSVDYDGQN-LRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPA----GKKILALQGNQLMPTFS 239 (428)
T ss_pred ceEEEEcCCCCC-ceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCC----ceEeecCCCCccceEEC
Confidence 368899998843 3333333223344578887654 3 455443 3479999999875 33333322234567888
Q ss_pred cCCCeEEEEeCC--CCEEEEE--EcCC---CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--
Q psy13635 126 WLTEKLYWTDSE--TNKLEVS--SLDG---KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-- 196 (357)
Q Consensus 126 ~~~~~ly~td~~--~~~I~~~--~~~g---~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-- 196 (357)
|.++.|.++... ...|+.. ++++ ...+.+.... .......++.+.+..|+++...
T Consensus 240 PDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~----------------~~~~~~p~wSPDG~~Laf~s~~~g 303 (428)
T PRK01029 240 PRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEA----------------FGTQGNPSFSPDGTRLVFVSNKDG 303 (428)
T ss_pred CCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCC----------------CCCcCCeEECCCCCEEEEEECCCC
Confidence 888888887632 3345543 3332 1222222111 1122345677777777766432
Q ss_pred CCeEEEEEcCC--CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecC
Q psy13635 197 TDRIEVCRLEG--THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVD 274 (357)
Q Consensus 197 ~~~I~~~~~~g--~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~ 274 (357)
...|++++.++ ...+.+.. ........+.+|.+.+|+++........|+..++++...+.+... .......+..++
T Consensus 304 ~~~ly~~~~~~~g~~~~~lt~-~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~-~~~~~~p~wSpD 381 (428)
T PRK01029 304 RPRIYIMQIDPEGQSPRLLTK-KYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTS-PENKESPSWAID 381 (428)
T ss_pred CceEEEEECcccccceEEecc-CCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCC-CCCccceEECCC
Confidence 23788887764 32333332 223345678899878888876543235899999998877766533 223455677767
Q ss_pred CCEEEEEeC--CCCeEEEEeCCCCCeEEEe
Q psy13635 275 NEKLYWCDA--KTDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 275 ~~~lY~~d~--~~~~I~~~~~dG~~~~~i~ 302 (357)
+..|+++.. +...|+.++++|...+.+.
T Consensus 382 G~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt 411 (428)
T PRK01029 382 SLHLVYSAGNSNESELYLISLITKKTRKIV 411 (428)
T ss_pred CCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence 777877643 3457888888887665554
No 72
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.42 E-value=0.00036 Score=67.42 Aligned_cols=220 Identities=9% Similarity=0.097 Sum_probs=133.3
Q ss_pred CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC--CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC
Q psy13635 50 KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 127 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~ 127 (357)
.+|+..|.+|.. ...+...-.....+.++|++.+|.++...+ ..|+..++.++. ...+...-..-..+++.+.
T Consensus 184 ~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~----~~~l~~~~g~~~~~~wSPD 258 (429)
T PRK01742 184 YEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGA----RKVVASFRGHNGAPAFSPD 258 (429)
T ss_pred EEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCc----eEEEecCCCccCceeECCC
Confidence 367788888844 333334344567889999999998875433 469999987763 2333221122335788888
Q ss_pred CCeEEEEeCCC--CEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEE
Q psy13635 128 TEKLYWTDSET--NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVC 203 (357)
Q Consensus 128 ~~~ly~td~~~--~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~ 203 (357)
++.|+++.... -.|+.+++++...+.+.... ......++.+.+..|+++... .-.|+..
T Consensus 259 G~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~-----------------~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~ 321 (429)
T PRK01742 259 GSRLAFASSKDGVLNIYVMGANGGTPSQLTSGA-----------------GNNTEPSWSPDGQSILFTSDRSGSPQVYRM 321 (429)
T ss_pred CCEEEEEEecCCcEEEEEEECCCCCeEeeccCC-----------------CCcCCEEECCCCCEEEEEECCCCCceEEEE
Confidence 88888865333 36788888776655443211 123456777777777766432 3378888
Q ss_pred EcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC
Q psy13635 204 RLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA 283 (357)
Q Consensus 204 ~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~ 283 (357)
+.++...+.+ ... . ...+++|.+..|+++... .+.+.++.+...+.+... . .-...++.+.+..|+++..
T Consensus 322 ~~~~~~~~~l-~~~-~--~~~~~SpDG~~ia~~~~~----~i~~~Dl~~g~~~~lt~~-~-~~~~~~~sPdG~~i~~~s~ 391 (429)
T PRK01742 322 SASGGGASLV-GGR-G--YSAQISADGKTLVMINGD----NVVKQDLTSGSTEVLSST-F-LDESPSISPNGIMIIYSST 391 (429)
T ss_pred ECCCCCeEEe-cCC-C--CCccCCCCCCEEEEEcCC----CEEEEECCCCCeEEecCC-C-CCCCceECCCCCEEEEEEc
Confidence 8777655444 211 1 346788887788777542 677788876655444322 1 2234567777777777654
Q ss_pred CC-C-eEEEEeCCCCCeEEE
Q psy13635 284 KT-D-KIEMIDFDGNNRREL 301 (357)
Q Consensus 284 ~~-~-~I~~~~~dG~~~~~i 301 (357)
.. . .++..+.+|...+.+
T Consensus 392 ~g~~~~l~~~~~~G~~~~~l 411 (429)
T PRK01742 392 QGLGKVLQLVSADGRFKARL 411 (429)
T ss_pred CCCceEEEEEECCCCceEEc
Confidence 22 2 234456788776655
No 73
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.37 E-value=0.0025 Score=61.52 Aligned_cols=229 Identities=14% Similarity=0.112 Sum_probs=129.2
Q ss_pred CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCe---EEEEeC-CCCEEEEEEcCCCceEEEEecCCCCcceeeee
Q psy13635 93 EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK---LYWTDS-ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASY 168 (357)
Q Consensus 93 ~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~---ly~td~-~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~ 168 (357)
..|+.++.+|.+ ...+..+-......++.|.++. +|++.. +...|++.+++|...+.+....
T Consensus 165 ~~l~~~d~dG~~----~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~---------- 230 (428)
T PRK01029 165 GELWSVDYDGQN----LRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQ---------- 230 (428)
T ss_pred ceEEEEcCCCCC----ceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCC----------
Confidence 378888888885 2223222222233467776654 345543 3458999999987766654211
Q ss_pred ccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEE--EcCC---CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 169 KLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVC--RLEG---THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 169 ~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~--~~~g---~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
......++.|.+.+|.++-.. ...++.. ++++ ...+.+...........+++|++..|+++.....
T Consensus 231 -------g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g 303 (428)
T PRK01029 231 -------GNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDG 303 (428)
T ss_pred -------CCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCC
Confidence 012234666677788776532 2245543 3332 2233343322223345688988777777654322
Q ss_pred CCeEEEEecCCC--ceEEEeeCCCCCceEEEEecCCCEEEEEeCC--CCeEEEEeCCCCCeEEEecCCCCceEEEEE--E
Q psy13635 242 RPKIERSLLNGG--ERVLLVKDRLGWPNGITLDVDNEKLYWCDAK--TDKIEMIDFDGNNRRELINENLPHVFGISL--L 315 (357)
Q Consensus 242 ~~~I~~~~~dg~--~~~~~~~~~l~~P~giaid~~~~~lY~~d~~--~~~I~~~~~dG~~~~~i~~~~~~~p~gia~--~ 315 (357)
..+|+.++.++. ..+.+. .........+..+++.+|+++... ...|+.+++++...+.+... .......++ +
T Consensus 304 ~~~ly~~~~~~~g~~~~~lt-~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~-~~~~~~p~wSpD 381 (428)
T PRK01029 304 RPRIYIMQIDPEGQSPRLLT-KKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTS-PENKESPSWAID 381 (428)
T ss_pred CceEEEEECcccccceEEec-cCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCC-CCCccceEECCC
Confidence 358999888643 233332 222233456777788888876543 35799999988777655432 222334444 4
Q ss_pred CCEEEEEeCC--CCeEEEEeCccCceeEEEec
Q psy13635 316 GDYVYWTDWQ--RRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 316 ~~~ly~td~~--~~~I~~~~~~~g~~~~~i~~ 345 (357)
+..|+++... ...|+.++..+++ .+.+..
T Consensus 382 G~~L~f~~~~~g~~~L~~vdl~~g~-~~~Lt~ 412 (428)
T PRK01029 382 SLHLVYSAGNSNESELYLISLITKK-TRKIVI 412 (428)
T ss_pred CCEEEEEECCCCCceEEEEECCCCC-EEEeec
Confidence 5677765432 3568899985444 444443
No 74
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=98.34 E-value=0.0011 Score=59.68 Aligned_cols=213 Identities=15% Similarity=0.151 Sum_probs=132.0
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc----------CCCceEEEEecCCCCcceeeeeccCcccccCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL----------DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHP 178 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~----------~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p 178 (357)
..+....+..|.|+++. .+.||.+.. .+|.++.- .+..-...+ ||.... .+.+ ..
T Consensus 41 l~~~~r~F~r~MGl~~~--~~~l~~~t~--~qiw~f~~~~n~l~~~~~~~~~D~~yv------Pr~~~~----TGdi-di 105 (335)
T TIGR03032 41 LDVFERTFPRPMGLAVS--PQSLTLGTR--YQLWRFANVDNLLPAGQTHPGYDRLYV------PRASYV----TGDI-DA 105 (335)
T ss_pred EEEEeeccCccceeeee--CCeEEEEEc--ceeEEcccccccccccccCCCCCeEEe------eeeeee----ccCc-ch
Confidence 55666778899999997 688998873 46776611 111111111 222111 1111 45
Q ss_pred ceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceE--------EEecCCCCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEe
Q psy13635 179 DGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRK--------VLVNTDLVEPRAITLSPAHGYLFWSDWNEK-RPKIERSL 249 (357)
Q Consensus 179 ~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~--------~~~~~~~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~ 249 (357)
..+++ .++.+++.+..-+.+...+.+-+... .+..++-=+-+|+|+. .+.--|+|..+.. ...=+|-+
T Consensus 106 Hdia~--~~~~l~fVNT~fSCLatl~~~~SF~P~WkPpFIs~la~eDRCHLNGlA~~-~g~p~yVTa~~~sD~~~gWR~~ 182 (335)
T TIGR03032 106 HDLAL--GAGRLLFVNTLFSCLATVSPDYSFVPLWKPPFISKLAPEDRCHLNGMALD-DGEPRYVTALSQSDVADGWREG 182 (335)
T ss_pred hheee--cCCcEEEEECcceeEEEECCCCccccccCCccccccCccCceeecceeee-CCeEEEEEEeeccCCccccccc
Confidence 66777 47788888888888888877765432 2233333467899998 3345666654422 11223322
Q ss_pred c-CCCce-----EEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC-CCCeEEEecCCCCceEEEEEECCEEEEE
Q psy13635 250 L-NGGER-----VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD-GNNRRELINENLPHVFGISLLGDYVYWT 322 (357)
Q Consensus 250 ~-dg~~~-----~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~~~~~~~p~gia~~~~~ly~t 322 (357)
. +|+.. .+++.+++..|.+--. .+++||++|++.+.+.+++++ |... .+. .--..|.||++.++.+++.
T Consensus 183 ~~~gG~vidv~s~evl~~GLsmPhSPRW--hdgrLwvldsgtGev~~vD~~~G~~e-~Va-~vpG~~rGL~f~G~llvVg 258 (335)
T TIGR03032 183 RRDGGCVIDIPSGEVVASGLSMPHSPRW--YQGKLWLLNSGRGELGYVDPQAGKFQ-PVA-FLPGFTRGLAFAGDFAFVG 258 (335)
T ss_pred ccCCeEEEEeCCCCEEEcCccCCcCCcE--eCCeEEEEECCCCEEEEEcCCCCcEE-EEE-ECCCCCcccceeCCEEEEE
Confidence 2 22111 1233467888888888 589999999999999999997 5443 343 3445899999998888886
Q ss_pred eCCCC-------------------eEEEEeCccCceeEEE
Q psy13635 323 DWQRR-------------------SIDRVNKITGNDREVI 343 (357)
Q Consensus 323 d~~~~-------------------~I~~~~~~~g~~~~~i 343 (357)
-++.+ .|..+|..+|.....+
T Consensus 259 mSk~R~~~~f~glpl~~~l~~~~CGv~vidl~tG~vv~~l 298 (335)
T TIGR03032 259 LSKLRESRVFGGLPIEERLDALGCGVAVIDLNSGDVVHWL 298 (335)
T ss_pred eccccCCCCcCCCchhhhhhhhcccEEEEECCCCCEEEEE
Confidence 55432 3566777777755543
No 75
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=98.34 E-value=1.8e-06 Score=54.27 Aligned_cols=40 Identities=43% Similarity=0.809 Sum_probs=36.4
Q ss_pred EeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 258 LVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 258 ~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
++..++..|+|+++|+.+++|||+|...+.|.+++++|++
T Consensus 3 ~~~~~~~~~~~la~d~~~~~lYw~D~~~~~I~~~~~~g~~ 42 (43)
T smart00135 3 LLSEGLGHPNGLAVDWIEGRLYWTDWGLDVIEVANLDGTN 42 (43)
T ss_pred EEECCCCCcCEEEEeecCCEEEEEeCCCCEEEEEeCCCCC
Confidence 4456789999999999999999999999999999999975
No 76
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=98.29 E-value=2.6e-06 Score=53.57 Aligned_cols=40 Identities=45% Similarity=0.987 Sum_probs=36.3
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
++..++..|.|+|+||.+++|||+|...+.|.+++++|..
T Consensus 3 ~~~~~~~~~~~la~d~~~~~lYw~D~~~~~I~~~~~~g~~ 42 (43)
T smart00135 3 LLSEGLGHPNGLAVDWIEGRLYWTDWGLDVIEVANLDGTN 42 (43)
T ss_pred EEECCCCCcCEEEEeecCCEEEEEeCCCCEEEEEeCCCCC
Confidence 4556888999999999999999999999999999999874
No 77
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=98.16 E-value=0.0004 Score=65.11 Aligned_cols=215 Identities=16% Similarity=0.172 Sum_probs=124.2
Q ss_pred EEEEeCCcEEEEEcCCC---CcceEeccC-----CCcEEEEEEEccCCEEEEEeCCC-------------CeEEEEEcCC
Q psy13635 44 LLFATSKDIRIANLSRP---LKPVTIIKD-----LEEGAAIDYYYKKSMVCWTDHGT-------------EMISCCTFDG 102 (357)
Q Consensus 44 l~~~~~~~i~~~~~~~~---~~~~~~~~~-----~~~~~~i~~d~~~~~ly~~d~~~-------------~~I~~~~~~g 102 (357)
++.++...+.+++ .+. .....+..+ ...-..|.|++++ +||++=-.. ++|.+...++
T Consensus 143 ~~~~n~~~~~~~~-~g~~~l~~~~~i~~~lP~~~~H~g~~l~f~pDG-~Lyvs~G~~~~~~~aq~~~~~~Gk~~r~~~a~ 220 (399)
T COG2133 143 LYVANRVAIGRLP-GGDTKLSEPKVIFRGIPKGGHHFGGRLVFGPDG-KLYVTTGSNGDPALAQDNVSLAGKVLRIDRAG 220 (399)
T ss_pred ceEEEEEEEEEcC-CCccccccccEEeecCCCCCCcCcccEEECCCC-cEEEEeCCCCCcccccCccccccceeeeccCc
Confidence 5556665566666 231 112222222 3345678999865 999983332 3455555444
Q ss_pred CCc----ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCC
Q psy13635 103 NNV----GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHP 178 (357)
Q Consensus 103 ~~~----~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p 178 (357)
.-. ....++...++.+|.|+++++.++.||.++.+...+ .-+.+...+ . +.+...+|
T Consensus 221 ~~~~d~p~~~~~i~s~G~RN~qGl~w~P~tg~Lw~~e~g~d~~----~~~Deln~i-~--------------~G~nYGWP 281 (399)
T COG2133 221 IIPADNPFPNSEIWSYGHRNPQGLAWHPVTGALWTTEHGPDAL----RGPDELNSI-R--------------PGKNYGWP 281 (399)
T ss_pred ccccCCCCCCcceEEeccCCccceeecCCCCcEEEEecCCCcc----cCccccccc-c--------------cCCccCCc
Confidence 321 112568888999999999999999999999775444 111111111 0 01223455
Q ss_pred ceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec-----CCCCCceEEEEeCCC------CEEEEEeCCCCCCeEEE
Q psy13635 179 DGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN-----TDLVEPRAITLSPAH------GYLFWSDWNEKRPKIER 247 (357)
Q Consensus 179 ~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~-----~~~~~P~giavd~~~------g~Ly~~d~~~~~~~I~~ 247 (357)
..||.....++.. .++........ ..-..|.|+++-.-+ +.+|++..+.. .+.+
T Consensus 282 ----------~~~~G~~~~g~~~---~~~~~~~~~~~p~~~~~~h~ApsGmaFy~G~~fP~~r~~lfV~~hgsw--~~~~ 346 (399)
T COG2133 282 ----------YAYFGQNYDGRAI---PDGTVVAGAIQPVYTWAPHIAPSGMAFYTGDLFPAYRGDLFVGAHGSW--PVLR 346 (399)
T ss_pred ----------eeccCcccCcccc---CCCcccccccCCceeeccccccceeEEecCCcCccccCcEEEEeecce--eEEE
Confidence 2233221111111 11222111111 123467899987422 68999998853 6888
Q ss_pred EecCCC---ceEEEeeC-CCCCceEEEEecCCCEEEEEeCC-CCeEEEEeCCC
Q psy13635 248 SLLNGG---ERVLLVKD-RLGWPNGITLDVDNEKLYWCDAK-TDKIEMIDFDG 295 (357)
Q Consensus 248 ~~~dg~---~~~~~~~~-~l~~P~giaid~~~~~lY~~d~~-~~~I~~~~~dG 295 (357)
.+.+|. ..+..+.. .-..|.++++. .+|.||+++.. +++|+|+..++
T Consensus 347 ~~~~g~~~~~~~~fl~~d~~gR~~dV~v~-~DGallv~~D~~~g~i~Rv~~~~ 398 (399)
T COG2133 347 LRPDGNYKVVLTGFLSGDLGGRPRDVAVA-PDGALLVLTDQGDGRILRVSYAG 398 (399)
T ss_pred eccCCCcceEEEEEEecCCCCcccceEEC-CCCeEEEeecCCCCeEEEecCCC
Confidence 888887 33334432 22689999998 68888888866 67999998765
No 78
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=98.05 E-value=0.0076 Score=53.52 Aligned_cols=257 Identities=15% Similarity=0.131 Sum_probs=138.7
Q ss_pred CeEEEEEe-CCcEEEEEcCCCCcceEecc-CC-CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcC
Q psy13635 41 AQMLLFAT-SKDIRIANLSRPLKPVTIIK-DL-EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLI 117 (357)
Q Consensus 41 ~~~l~~~~-~~~i~~~~~~~~~~~~~~~~-~~-~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 117 (357)
+.+.+++. +..++++|++...+.++.-. +. +-..++++ .++..|++|...+- ..+++.... ..++.....
T Consensus 96 e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgf-Livdvsdps----sP~lagrya 168 (370)
T COG5276 96 EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGF-LIVDVSDPS----SPQLAGRYA 168 (370)
T ss_pred ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcE-EEEECCCCC----Cceeeeeec
Confidence 45677777 45699999988666665532 22 33555555 47999999986553 344444332 222222222
Q ss_pred Cc----eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 118 TP----DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 118 ~p----~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
.| +.+++. ++.-|+++.+.+ +..++.......++..+-- ..|.--.+-...++.|.+
T Consensus 169 ~~~~d~~~v~IS--Gn~AYvA~~d~G-L~ivDVSnp~sPvli~~~n----------------~g~g~~sv~vsdnr~y~v 229 (370)
T COG5276 169 LPGGDTHDVAIS--GNYAYVAWRDGG-LTIVDVSNPHSPVLIGSYN----------------TGPGTYSVSVSDNRAYLV 229 (370)
T ss_pred cCCCCceeEEEe--cCeEEEEEeCCC-eEEEEccCCCCCeEEEEEe----------------cCCceEEEEecCCeeEEE
Confidence 23 456775 788898877554 3444444433333332111 122222333357788888
Q ss_pred eCCCCeEEEEEcCCCceEEEe-cCCCCCceEE---EEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEE
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLV-NTDLVEPRAI---TLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGI 269 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~-~~~~~~P~gi---avd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gi 269 (357)
+...+ +...+.++.....+. .-....|.++ .+. +.+.|++|.......|-..+..+.....-+.....+..||
T Consensus 230 vy~eg-vlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs--~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g~~a~gi 306 (370)
T COG5276 230 VYDEG-VLIVDVSGPSSPTVFGSYETSNPVSISTVPVS--GEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGI 306 (370)
T ss_pred Ecccc-eEEEecCCCCCceEeeccccCCcccccceecc--cceeeeeccccCceeEeccCCCCCchhccccCCCccccce
Confidence 87654 556666665433333 2234566666 454 5799999976322233333333322221122223456788
Q ss_pred EEecCCCEEEEEeCCCCeEEEEeCCC-CCeEEEecCCCCceEEEEEECCEEEEEeCCCCeE
Q psy13635 270 TLDVDNEKLYWCDAKTDKIEMIDFDG-NNRRELINENLPHVFGISLLGDYVYWTDWQRRSI 329 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~~I~~~~~dG-~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I 329 (357)
.. .++.+|++|..++.+.-+..-. .+.+ ...........+.++...+|.+|+..+..
T Consensus 307 ~a--y~~y~yiadkn~g~vV~~s~~s~m~~~-~g~~ti~~s~~v~~~~q~~y~~d~~~gl~ 364 (370)
T COG5276 307 RA--YGNYNYIADKNTGAVVDASPPSMMDKR-PGRPTIGQSCDVSVDTQIIYSTDYNGGLS 364 (370)
T ss_pred EE--ecCeeEeccCCceEEEeCCChhhcccc-cCcceEeeecceEEEeeEEEEeecCCCEE
Confidence 87 6899999998766554332211 1111 00011223344556656899999887653
No 79
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=98.05 E-value=0.0043 Score=54.89 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=105.2
Q ss_pred CceEEEeCCCCeEEEEeCCCC--eEEEEEcCCCce-EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCc
Q psy13635 178 PDGVAVDWVARNLYWTDTGTD--RIEVCRLEGTHR-KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGE 254 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~--~I~~~~~~g~~~-~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~ 254 (357)
-.||.++ .++.||-+....+ +|.+.+++.... ...--..--.-.||++- +++||.-.|.. +.....+.+.-.
T Consensus 47 TQGL~~~-~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk~--~~~f~yd~~tl~ 121 (264)
T PF05096_consen 47 TQGLEFL-DDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWKE--GTGFVYDPNTLK 121 (264)
T ss_dssp EEEEEEE-ETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESSS--SEEEEEETTTTE
T ss_pred CccEEec-CCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEecC--CeEEEEccccce
Confidence 4688885 3789999887665 899999885443 22222223456799998 68999999995 599999987544
Q ss_pred eEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC-CeEEEecCC----CCceEEEEEECCEEEEEeCCCCeE
Q psy13635 255 RVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN-NRRELINEN----LPHVFGISLLGDYVYWTDWQRRSI 329 (357)
Q Consensus 255 ~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~-~~~~i~~~~----~~~p~gia~~~~~ly~td~~~~~I 329 (357)
...-+.- -...-||+-| +..||.+|. +.+++..|+..- ..+.+.... .....-|.+.+|.||---|.+..|
T Consensus 122 ~~~~~~y-~~EGWGLt~d--g~~Li~SDG-S~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~td~I 197 (264)
T PF05096_consen 122 KIGTFPY-PGEGWGLTSD--GKRLIMSDG-SSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQTDRI 197 (264)
T ss_dssp EEEEEE--SSS--EEEEC--SSCEEEE-S-SSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTSSEE
T ss_pred EEEEEec-CCcceEEEcC--CCEEEEECC-ccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCCCeE
Confidence 4333222 2466899964 788999884 789999998643 222222212 334456788899999999999999
Q ss_pred EEEeCccCceeEEE
Q psy13635 330 DRVNKITGNDREVI 343 (357)
Q Consensus 330 ~~~~~~~g~~~~~i 343 (357)
.++|+.+|+....+
T Consensus 198 ~~Idp~tG~V~~~i 211 (264)
T PF05096_consen 198 VRIDPETGKVVGWI 211 (264)
T ss_dssp EEEETTT-BEEEEE
T ss_pred EEEeCCCCeEEEEE
Confidence 99999999988876
No 80
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.03 E-value=0.011 Score=54.24 Aligned_cols=273 Identities=13% Similarity=0.057 Sum_probs=151.2
Q ss_pred cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCC---------CCeEEEEEcCCCCcceeEEEEeCC-----c
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHG---------TEMISCCTFDGNNVGSKHNVITNG-----L 116 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~---------~~~I~~~~~~g~~~~~~~~~~~~~-----~ 116 (357)
.+..+|.+..+-.-.+...+... +.++++...+|.++.. ++.|...+...-... .+..+... .
T Consensus 18 rv~viD~d~~k~lGmi~~g~~~~--~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~-~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 18 RVYVIDADSGKLLGMIDTGFLGN--VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPT-GEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEETTTTEEEEEEEEESSEE--EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEE-EEEEETTS-B--BS
T ss_pred eEEEEECCCCcEEEEeecccCCc--eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCccc-ceEecCCcchheec
Confidence 46677776633222222233222 5568888888877542 123555666555321 12233322 2
Q ss_pred CCceeEEEEcCCCeEEEEeC-CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDS-ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~-~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
..+.-+++...++.+|+.+. -...|.++++..+....-+. .|.+.-+=|..+.=|.+-.
T Consensus 95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~--------------------~PGC~~iyP~~~~~F~~lC 154 (342)
T PF06433_consen 95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEID--------------------TPGCWLIYPSGNRGFSMLC 154 (342)
T ss_dssp --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEE--------------------GTSEEEEEEEETTEEEEEE
T ss_pred ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeec--------------------CCCEEEEEecCCCceEEEe
Confidence 45677888878999999884 46789999987765422221 2333222222222355666
Q ss_pred CCCeEEEEEcC--CCceEEEe--cCCCCCc--eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-------
Q psy13635 196 GTDRIEVCRLE--GTHRKVLV--NTDLVEP--RAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR------- 262 (357)
Q Consensus 196 ~~~~I~~~~~~--g~~~~~~~--~~~~~~P--~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~------- 262 (357)
+.+++..+.+| |+...... ......| ..=+.+..++++||.... +.|+.+++.|......-.-.
T Consensus 155 ~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~---G~v~~~dlsg~~~~~~~~~~~~t~~e~ 231 (342)
T PF06433_consen 155 GDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYE---GNVYSADLSGDSAKFGKPWSLLTDAEK 231 (342)
T ss_dssp TTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTT---SEEEEEEETTSSEEEEEEEESS-HHHH
T ss_pred cCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecC---CEEEEEeccCCcccccCcccccCcccc
Confidence 67788877776 44332111 1111222 111233456789987766 69999999988755443211
Q ss_pred --CCCce---EEEEecCCCEEEEEeC----CC-----CeEEEEeCCCCCeEEEecCCCCceE-EEEEEC---CEEEEEeC
Q psy13635 263 --LGWPN---GITLDVDNEKLYWCDA----KT-----DKIEMIDFDGNNRRELINENLPHVF-GISLLG---DYVYWTDW 324 (357)
Q Consensus 263 --l~~P~---giaid~~~~~lY~~d~----~~-----~~I~~~~~dG~~~~~i~~~~~~~p~-gia~~~---~~ly~td~ 324 (357)
--.|- -+|++...++||+.-. ++ ..||.+|+....+..-+. +.+|. +|++.. -.||-++.
T Consensus 232 ~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~--l~~~~~Si~Vsqd~~P~L~~~~~ 309 (342)
T PF06433_consen 232 ADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIP--LEHPIDSIAVSQDDKPLLYALSA 309 (342)
T ss_dssp HTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEE--EEEEESEEEEESSSS-EEEEEET
T ss_pred ccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEe--CCCccceEEEccCCCcEEEEEcC
Confidence 11242 3788888999999752 11 258999887655433332 33443 777763 47888888
Q ss_pred CCCeEEEEeCccCceeEEEecccCCce
Q psy13635 325 QRRSIDRVNKITGNDREVIIERSCTGV 351 (357)
Q Consensus 325 ~~~~I~~~~~~~g~~~~~i~~~l~~p~ 351 (357)
..+.+..+|..+|+....+-+-...|.
T Consensus 310 ~~~~l~v~D~~tGk~~~~~~~lG~~~~ 336 (342)
T PF06433_consen 310 GDGTLDVYDAATGKLVRSIEQLGETPT 336 (342)
T ss_dssp TTTEEEEEETTT--EEEEE---SSS--
T ss_pred CCCeEEEEeCcCCcEEeehhccCCCce
Confidence 888999999989988877765444443
No 81
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=97.93 E-value=0.013 Score=52.08 Aligned_cols=226 Identities=14% Similarity=0.160 Sum_probs=122.4
Q ss_pred EEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe-CCc-CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEE
Q psy13635 77 DYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGL-ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVL 154 (357)
Q Consensus 77 ~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-~~~-~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~ 154 (357)
|+...+++.|++|..++ +..+++..-.. .+.+. -+. ....++.+ .++..|++|...+ ...++.......++
T Consensus 91 Dv~vse~yvyvad~ssG-L~IvDIS~P~s---P~~~~~lnt~gyaygv~v--sGn~aYVadlddg-fLivdvsdpssP~l 163 (370)
T COG5276 91 DVRVSEEYVYVADWSSG-LRIVDISTPDS---PTLIGFLNTDGYAYGVYV--SGNYAYVADLDDG-FLIVDVSDPSSPQL 163 (370)
T ss_pred eeEecccEEEEEcCCCc-eEEEeccCCCC---cceeccccCCceEEEEEe--cCCEEEEeeccCc-EEEEECCCCCCcee
Confidence 44456899999997665 44455443320 11111 111 22344444 4888999997544 33334332222222
Q ss_pred EecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEE
Q psy13635 155 YWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLF 234 (357)
Q Consensus 155 ~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly 234 (357)
.... + ..-.....++|. +++-|+++...+ +...+.......+++..--..|.--.+.+...+.|
T Consensus 164 agry-a------------~~~~d~~~v~IS--Gn~AYvA~~d~G-L~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y 227 (370)
T COG5276 164 AGRY-A------------LPGGDTHDVAIS--GNYAYVAWRDGG-LTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAY 227 (370)
T ss_pred eeee-c------------cCCCCceeEEEe--cCeEEEEEeCCC-eEEEEccCCCCCeEEEEEecCCceEEEEecCCeeE
Confidence 1110 0 000122456664 788899887655 44444433333333332212333333444467899
Q ss_pred EEeCCCCCCeEEEEecCCCceEEEe-eCCCCCceEE---EEecCCCEEEEEeCCCCeEEEEeC---CCCCeEEEecCCCC
Q psy13635 235 WSDWNEKRPKIERSLLNGGERVLLV-KDRLGWPNGI---TLDVDNEKLYWCDAKTDKIEMIDF---DGNNRRELINENLP 307 (357)
Q Consensus 235 ~~d~~~~~~~I~~~~~dg~~~~~~~-~~~l~~P~gi---aid~~~~~lY~~d~~~~~I~~~~~---dG~~~~~i~~~~~~ 307 (357)
.++..+ .+.-++.++....+++ .-+...|.++ .+ .+.+.|++|...+ +..++. .+.....-+.....
T Consensus 228 ~vvy~e---gvlivd~s~~ssp~~~gsyet~~p~~~s~v~V--s~~~~Yvadga~g-l~~idisnp~spfl~ss~~t~g~ 301 (370)
T COG5276 228 LVVYDE---GVLIVDVSGPSSPTVFGSYETSNPVSISTVPV--SGEYAYVADGAKG-LPIIDISNPPSPFLSSSLDTAGY 301 (370)
T ss_pred EEEccc---ceEEEecCCCCCceEeeccccCCcccccceec--ccceeeeeccccC-ceeEeccCCCCCchhccccCCCc
Confidence 999874 5777777776544443 3345667665 55 7899999996543 233332 22222111112234
Q ss_pred ceEEEEEECCEEEEEeCCCCeEEE
Q psy13635 308 HVFGISLLGDYVYWTDWQRRSIDR 331 (357)
Q Consensus 308 ~p~gia~~~~~ly~td~~~~~I~~ 331 (357)
+..||+..++.+|++|-..+.|.-
T Consensus 302 ~a~gi~ay~~y~yiadkn~g~vV~ 325 (370)
T COG5276 302 QAAGIRAYGNYNYIADKNTGAVVD 325 (370)
T ss_pred cccceEEecCeeEeccCCceEEEe
Confidence 678999999999999988777643
No 82
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.93 E-value=0.0029 Score=62.32 Aligned_cols=227 Identities=13% Similarity=0.058 Sum_probs=134.0
Q ss_pred EccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEE--cCCCeEEE-----------------EeCCCC
Q psy13635 79 YYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAID--WLTEKLYW-----------------TDSETN 139 (357)
Q Consensus 79 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd--~~~~~ly~-----------------td~~~~ 139 (357)
.+++..||+-|..+.+|-|++++--.+. +.+...+.....|+.+. +.++.+|- ++...+
T Consensus 138 ~ydGr~~findk~n~Rvari~l~~~~~~--~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~ 215 (635)
T PRK02888 138 TYDGRYLFINDKANTRVARIRLDVMKCD--KITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRS 215 (635)
T ss_pred ccceeEEEEecCCCcceEEEECccEeec--eeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeE
Confidence 3556788998999999999999876421 22333455566677665 34444433 222223
Q ss_pred EEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC---CCeEEEEEcCCCceEEEecC
Q psy13635 140 KLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG---TDRIEVCRLEGTHRKVLVNT 216 (357)
Q Consensus 140 ~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~---~~~I~~~~~~g~~~~~~~~~ 216 (357)
.+.+++.+.. ++.. .+. .. ..|..+++++.++.+|++..+ ...+..++.+.......+.
T Consensus 216 ~vSvID~etm--eV~~--------qV~-----Vd--gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfn- 277 (635)
T PRK02888 216 LFTAVDAETM--EVAW--------QVM-----VD--GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFN- 277 (635)
T ss_pred EEEEEECccc--eEEE--------EEE-----eC--CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEc-
Confidence 3333333321 1111 111 11 278999999989999998632 2344444432222111111
Q ss_pred CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC-----CceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEE
Q psy13635 217 DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG-----GERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 217 ~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg-----~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~ 291 (357)
.+..-++-+.....|+. + .+|-.++... ......+.. -..|.|+++++++.++|++...++.+..+
T Consensus 278 ---i~~iea~vkdGK~~~V~--g---n~V~VID~~t~~~~~~~v~~yIPV-GKsPHGV~vSPDGkylyVanklS~tVSVI 348 (635)
T PRK02888 278 ---IARIEEAVKAGKFKTIG--G---SKVPVVDGRKAANAGSALTRYVPV-PKNPHGVNTSPDGKYFIANGKLSPTVTVI 348 (635)
T ss_pred ---hHHHHHhhhCCCEEEEC--C---CEEEEEECCccccCCcceEEEEEC-CCCccceEECCCCCEEEEeCCCCCcEEEE
Confidence 11111222233455552 1 3677777554 233333333 37899999999999999999999999999
Q ss_pred eCCCCC---------eEEEec--CCCCceEEEEEEC-CEEEEEeCCCCeEEEEeC
Q psy13635 292 DFDGNN---------RRELIN--ENLPHVFGISLLG-DYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 292 ~~dG~~---------~~~i~~--~~~~~p~gia~~~-~~ly~td~~~~~I~~~~~ 334 (357)
+..... +..+.. +....|.-.++++ |+.|.|-.-...|.+.+.
T Consensus 349 Dv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~ 403 (635)
T PRK02888 349 DVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNI 403 (635)
T ss_pred EChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEeh
Confidence 986532 122222 2355888888885 789999888888888775
No 83
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=97.85 E-value=5e-05 Score=42.95 Aligned_cols=28 Identities=18% Similarity=0.703 Sum_probs=25.2
Q ss_pred CCCceEEEEecCCCEEEEEeCCCCeEEEE
Q psy13635 263 LGWPNGITLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 263 l~~P~giaid~~~~~lY~~d~~~~~I~~~ 291 (357)
+..|.||++| .+|+||++|.++++|+++
T Consensus 1 f~~P~gvav~-~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 1 FNYPHGVAVD-SDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp BSSEEEEEEE-TTSEEEEEECCCTEEEEE
T ss_pred CcCCcEEEEe-CCCCEEEEECCCCEEEEC
Confidence 4689999999 899999999999999864
No 84
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.80 E-value=0.02 Score=50.10 Aligned_cols=181 Identities=10% Similarity=0.097 Sum_probs=106.9
Q ss_pred CCeEEEEeCCCCEEEEEEc-CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEE-c
Q psy13635 128 TEKLYWTDSETNKLEVSSL-DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCR-L 205 (357)
Q Consensus 128 ~~~ly~td~~~~~I~~~~~-~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~-~ 205 (357)
++.+|+++ ..+.++.++. +|+..-..-. .+.+..+ .+++ ++.+|+.... +++..++ .
T Consensus 36 ~~~v~~~~-~~~~l~~~d~~tG~~~W~~~~---------------~~~~~~~--~~~~--~~~v~v~~~~-~~l~~~d~~ 94 (238)
T PF13360_consen 36 GGRVYVAS-GDGNLYALDAKTGKVLWRFDL---------------PGPISGA--PVVD--GGRVYVGTSD-GSLYALDAK 94 (238)
T ss_dssp TTEEEEEE-TTSEEEEEETTTSEEEEEEEC---------------SSCGGSG--EEEE--TTEEEEEETT-SEEEEEETT
T ss_pred CCEEEEEc-CCCEEEEEECCCCCEEEEeec---------------cccccce--eeec--ccccccccce-eeeEecccC
Confidence 78888885 5788999997 5543322211 1111122 2333 7788888744 4888888 5
Q ss_pred CCCceEEE-ecC----CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce-EEEeeCCCC--C--------ceEE
Q psy13635 206 EGTHRKVL-VNT----DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER-VLLVKDRLG--W--------PNGI 269 (357)
Q Consensus 206 ~g~~~~~~-~~~----~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~-~~~~~~~l~--~--------P~gi 269 (357)
+|+..-.. ... ....+...+++ ++.+|+.... +.|..+++..+.. ...-...-. . ...+
T Consensus 95 tG~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~ 169 (238)
T PF13360_consen 95 TGKVLWSIYLTSSPPAGVRSSSSPAVD--GDRLYVGTSS---GKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSP 169 (238)
T ss_dssp TSCEEEEEEE-SSCTCSTB--SEEEEE--TTEEEEEETC---SEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEE
T ss_pred CcceeeeeccccccccccccccCceEe--cCEEEEEecc---CcEEEEecCCCcEEEEeecCCCCCCcceeeecccccce
Confidence 67665553 211 12234555666 5788888864 5888888664433 222111100 1 1233
Q ss_pred EEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEE-EEEECCEEEEEeCCCCeEEEEeCccCcee
Q psy13635 270 TLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFG-ISLLGDYVYWTDWQRRSIDRVNKITGNDR 340 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~g-ia~~~~~ly~td~~~~~I~~~~~~~g~~~ 340 (357)
.+ .++.+|++..... +..++....... -.. ....+.+ ....++.||+++ ..+.|+.+++.+|+..
T Consensus 170 ~~--~~~~v~~~~~~g~-~~~~d~~tg~~~-w~~-~~~~~~~~~~~~~~~l~~~~-~~~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 170 VI--SDGRVYVSSGDGR-VVAVDLATGEKL-WSK-PISGIYSLPSVDGGTLYVTS-SDGRLYALDLKTGKVV 235 (238)
T ss_dssp EC--CTTEEEEECCTSS-EEEEETTTTEEE-EEE-CSS-ECECEECCCTEEEEEE-TTTEEEEEETTTTEEE
T ss_pred EE--ECCEEEEEcCCCe-EEEEECCCCCEE-EEe-cCCCccCCceeeCCEEEEEe-CCCEEEEEECCCCCEE
Confidence 33 4669999886554 556677655543 222 2555666 566789999999 7799999999888864
No 85
>KOG0285|consensus
Probab=97.63 E-value=0.045 Score=49.86 Aligned_cols=248 Identities=13% Similarity=0.079 Sum_probs=149.4
Q ss_pred ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 67 IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 67 ~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
...++-...+++||. +.-|.+...++.|...++..+. -...+.......+|++|....-.|| +....+.|...++
T Consensus 148 ~gHlgWVr~vavdP~-n~wf~tgs~DrtikIwDlatg~---LkltltGhi~~vr~vavS~rHpYlF-s~gedk~VKCwDL 222 (460)
T KOG0285|consen 148 SGHLGWVRSVAVDPG-NEWFATGSADRTIKIWDLATGQ---LKLTLTGHIETVRGVAVSKRHPYLF-SAGEDKQVKCWDL 222 (460)
T ss_pred hhccceEEEEeeCCC-ceeEEecCCCceeEEEEcccCe---EEEeecchhheeeeeeecccCceEE-EecCCCeeEEEec
Confidence 346677889999995 6667778888889999988763 1334444567789999996555554 5556788888888
Q ss_pred CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEE
Q psy13635 147 DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITL 226 (357)
Q Consensus 147 ~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giav 226 (357)
.-...-.-.. +-+....+|++.|.-+.| ++......+.+-|+..+.......+.-.....+..
T Consensus 223 e~nkvIR~Yh----------------GHlS~V~~L~lhPTldvl-~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~ 285 (460)
T KOG0285|consen 223 EYNKVIRHYH----------------GHLSGVYCLDLHPTLDVL-VTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMC 285 (460)
T ss_pred hhhhhHHHhc----------------cccceeEEEeccccceeE-EecCCcceEEEeeecccceEEEecCCCCcceeEEe
Confidence 6443211111 122356677777665444 46666667777787776655555444344456666
Q ss_pred eCCCCEEEEEeCCCCCCeEEEEecCCC-ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeC-CCCCeEEEecC
Q psy13635 227 SPAHGYLFWSDWNEKRPKIERSLLNGG-ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDF-DGNNRRELINE 304 (357)
Q Consensus 227 d~~~g~Ly~~d~~~~~~~I~~~~~dg~-~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~-dG~~~~~i~~~ 304 (357)
.|.++.+|-.... +.|.--++.-+ ...++. ..-....++++.| ...+| +.+..+.|...++ .|..... +.+
T Consensus 286 ~~~dpqvit~S~D---~tvrlWDl~agkt~~tlt-~hkksvral~lhP-~e~~f-ASas~dnik~w~~p~g~f~~n-lsg 358 (460)
T KOG0285|consen 286 QPTDPQVITGSHD---STVRLWDLRAGKTMITLT-HHKKSVRALCLHP-KENLF-ASASPDNIKQWKLPEGEFLQN-LSG 358 (460)
T ss_pred ecCCCceEEecCC---ceEEEeeeccCceeEeee-cccceeeEEecCC-chhhh-hccCCccceeccCCccchhhc-ccc
Confidence 6666777766555 34554554332 233332 2223456777764 33444 4445556666654 5655544 222
Q ss_pred CCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 305 NLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 305 ~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
+-.....+++.++.+|++-..++.+..-+-.+|-+.+.+
T Consensus 359 h~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~~ 397 (460)
T KOG0285|consen 359 HNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQRG 397 (460)
T ss_pred ccceeeeeeeccCceEEEcCCceEEEEEecCcCcccccc
Confidence 333345566667777887777777766665566555444
No 86
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=97.59 E-value=0.00021 Score=40.37 Aligned_cols=28 Identities=29% Similarity=0.536 Sum_probs=25.0
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEE
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVS 144 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~ 144 (357)
+..|.|+|+| .+++||++|.++++|+++
T Consensus 1 f~~P~gvav~-~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 1 FNYPHGVAVD-SDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp BSSEEEEEEE-TTSEEEEEECCCTEEEEE
T ss_pred CcCCcEEEEe-CCCCEEEEECCCCEEEEC
Confidence 4579999999 699999999999999864
No 87
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.57 E-value=0.05 Score=48.26 Aligned_cols=194 Identities=14% Similarity=0.162 Sum_probs=125.2
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCC--eEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTE--MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~--~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
-....|+.|.. ++.||-+...-+ .|+++++++... ....-.+.-..-+|+++- +++||---.-++...+.+.+
T Consensus 44 ~aFTQGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~--~~~~~l~~~~FgEGit~~--~d~l~qLTWk~~~~f~yd~~ 118 (264)
T PF05096_consen 44 TAFTQGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKV--LQSVPLPPRYFGEGITIL--GDKLYQLTWKEGTGFVYDPN 118 (264)
T ss_dssp T-EEEEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSE--EEEEE-TTT--EEEEEEE--TTEEEEEESSSSEEEEEETT
T ss_pred cccCccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcE--EEEEECCccccceeEEEE--CCEEEEEEecCCeEEEEccc
Confidence 34667888853 689999977544 799999987641 223333333467999997 78999999889999999987
Q ss_pred CCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC-ceEEE-ec-C--CCCCc
Q psy13635 148 GKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT-HRKVL-VN-T--DLVEP 221 (357)
Q Consensus 148 g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~-~~~~~-~~-~--~~~~P 221 (357)
.-.. ..+--. ...-||+-| +..||.+|. +++++..|+..- ..+.+ +. . ....-
T Consensus 119 tl~~~~~~~y~------------------~EGWGLt~d--g~~Li~SDG-S~~L~~~dP~~f~~~~~i~V~~~g~pv~~L 177 (264)
T PF05096_consen 119 TLKKIGTFPYP------------------GEGWGLTSD--GKRLIMSDG-SSRLYFLDPETFKEVRTIQVTDNGRPVSNL 177 (264)
T ss_dssp TTEEEEEEE-S------------------SS--EEEEC--SSCEEEE-S-SSEEEEE-TTT-SEEEEEE-EETTEE---E
T ss_pred cceEEEEEecC------------------CcceEEEcC--CCEEEEECC-ccceEEECCcccceEEEEEEEECCEECCCc
Confidence 5322 222111 245788876 678998887 478999887642 22221 11 1 13344
Q ss_pred eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC----------C-----CCCceEEEEecCCCEEEEEeCCCC
Q psy13635 222 RAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD----------R-----LGWPNGITLDVDNEKLYWCDAKTD 286 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~----------~-----l~~P~giaid~~~~~lY~~d~~~~ 286 (357)
+-|..- +|.||---|.+. .|.++++..+.....+.- . ..-.+|||.|+..+++|+|-..=.
T Consensus 178 NELE~i--~G~IyANVW~td--~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~Wp 253 (264)
T PF05096_consen 178 NELEYI--NGKIYANVWQTD--RIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKLWP 253 (264)
T ss_dssp EEEEEE--TTEEEEEETTSS--EEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT-S
T ss_pred EeEEEE--cCEEEEEeCCCC--eEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCCCC
Confidence 556655 699998889864 999999987777665521 0 123689999999999999987777
Q ss_pred eEEEEeC
Q psy13635 287 KIEMIDF 293 (357)
Q Consensus 287 ~I~~~~~ 293 (357)
+++.+.+
T Consensus 254 ~lyeV~l 260 (264)
T PF05096_consen 254 KLYEVKL 260 (264)
T ss_dssp EEEEEEE
T ss_pred ceEEEEE
Confidence 8877764
No 88
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.47 E-value=0.042 Score=54.46 Aligned_cols=213 Identities=11% Similarity=0.050 Sum_probs=120.4
Q ss_pred cEEEEEcCCC-CcceEeccCCCcEEEEEEE--ccCCEEEE-----------------EeCCCCeEEEEEcCCCCcceeEE
Q psy13635 51 DIRIANLSRP-LKPVTIIKDLEEGAAIDYY--YKKSMVCW-----------------TDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 51 ~i~~~~~~~~-~~~~~~~~~~~~~~~i~~d--~~~~~ly~-----------------~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
.+-||+++.= ....+.+++....+|+.+. |..+.++- ++...+.+..++.+... ....
T Consensus 153 Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvID~etme--V~~q 230 (635)
T PRK02888 153 RVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAVDAETME--VAWQ 230 (635)
T ss_pred ceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEEECccce--EEEE
Confidence 4778888651 1222234566666666665 33444432 22222345555555432 1133
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCC---CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSE---TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA 187 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~---~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~ 187 (357)
+...+ +|..+++++.++.+|++..+ .+.+..++.......+.+ +.+..-++-..+
T Consensus 231 V~Vdg--npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvf--------------------ni~~iea~vkdG 288 (635)
T PRK02888 231 VMVDG--NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVF--------------------NIARIEEAVKAG 288 (635)
T ss_pred EEeCC--CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEE--------------------chHHHHHhhhCC
Confidence 33333 89999999988888888632 334444443222211111 011101111134
Q ss_pred CeEEEEeCCCCeEEEEEcCC-----CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce-------
Q psy13635 188 RNLYWTDTGTDRIEVCRLEG-----THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER------- 255 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g-----~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~------- 255 (357)
+..|+ +.++|.++|... ......+. --..|.|++++|+..++|++.... ..+..++......
T Consensus 289 K~~~V---~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS--~tVSVIDv~k~k~~~~~~~~ 362 (635)
T PRK02888 289 KFKTI---GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLS--PTVTVIDVRKLDDLFDGKIK 362 (635)
T ss_pred CEEEE---CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCC--CcEEEEEChhhhhhhhccCC
Confidence 45554 246788877654 22333333 247899999999988999999875 4888888764221
Q ss_pred --EEEeeC--CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 256 --VLLVKD--RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 256 --~~~~~~--~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
.+++.+ --..|...++| ..|+.|.+-.-...|.+.+++
T Consensus 363 ~~~~vvaevevGlGPLHTaFD-g~G~aytslf~dsqv~kwn~~ 404 (635)
T PRK02888 363 PRDAVVAEPELGLGPLHTAFD-GRGNAYTTLFLDSQIVKWNIE 404 (635)
T ss_pred ccceEEEeeccCCCcceEEEC-CCCCEEEeEeecceeEEEehH
Confidence 112211 12468889999 567899887777777777754
No 89
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=97.45 E-value=0.034 Score=50.26 Aligned_cols=171 Identities=15% Similarity=0.065 Sum_probs=99.6
Q ss_pred cccCCceEEEeCCCCeEEEEeCCCCeEEEE---E-------cCCCceE-----EEecCCCCCceEEEEeCCCCEEEEEeC
Q psy13635 174 EVEHPDGVAVDWVARNLYWTDTGTDRIEVC---R-------LEGTHRK-----VLVNTDLVEPRAITLSPAHGYLFWSDW 238 (357)
Q Consensus 174 ~~~~p~glavD~~~~~lY~td~~~~~I~~~---~-------~~g~~~~-----~~~~~~~~~P~giavd~~~g~Ly~~d~ 238 (357)
.|..|.||++. .++||.+... .|.+. + ..+..-. ....++--....|++. ++.+++.++
T Consensus 47 ~F~r~MGl~~~--~~~l~~~t~~--qiw~f~~~~n~l~~~~~~~~~D~~yvPr~~~~TGdidiHdia~~--~~~l~fVNT 120 (335)
T TIGR03032 47 TFPRPMGLAVS--PQSLTLGTRY--QLWRFANVDNLLPAGQTHPGYDRLYVPRASYVTGDIDAHDLALG--AGRLLFVNT 120 (335)
T ss_pred ccCccceeeee--CCeEEEEEcc--eeEEcccccccccccccCCCCCeEEeeeeeeeccCcchhheeec--CCcEEEEEC
Confidence 34577788775 5678877653 35544 1 1111111 1111223355678883 577888877
Q ss_pred CCCCCeEEEEecCCCceE--------EEeeCCCCCceEEEEecCCCEEEEEeCCC---CeEEEEeC-CCCCe-----EEE
Q psy13635 239 NEKRPKIERSLLNGGERV--------LLVKDRLGWPNGITLDVDNEKLYWCDAKT---DKIEMIDF-DGNNR-----REL 301 (357)
Q Consensus 239 ~~~~~~I~~~~~dg~~~~--------~~~~~~l~~P~giaid~~~~~lY~~d~~~---~~I~~~~~-dG~~~-----~~i 301 (357)
.- +.+...+.+-+-.. .+..++=-+-||+|++ .+.--|++--.. ..=++-.. +|.-. .++
T Consensus 121 ~f--SCLatl~~~~SF~P~WkPpFIs~la~eDRCHLNGlA~~-~g~p~yVTa~~~sD~~~gWR~~~~~gG~vidv~s~ev 197 (335)
T TIGR03032 121 LF--SCLATVSPDYSFVPLWKPPFISKLAPEDRCHLNGMALD-DGEPRYVTALSQSDVADGWREGRRDGGCVIDIPSGEV 197 (335)
T ss_pred cc--eeEEEECCCCccccccCCccccccCccCceeecceeee-CCeEEEEEEeeccCCcccccccccCCeEEEEeCCCCE
Confidence 73 47777776654331 1122232456899996 555567665322 12222222 22111 123
Q ss_pred ecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 302 INENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 302 ~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
+.+++..|.+-.+.+|.||+.|++.+++.++++.+|+...+ +.--+.|-|+.
T Consensus 198 l~~GLsmPhSPRWhdgrLwvldsgtGev~~vD~~~G~~e~V-a~vpG~~rGL~ 249 (335)
T TIGR03032 198 VASGLSMPHSPRWYQGKLWLLNSGRGELGYVDPQAGKFQPV-AFLPGFTRGLA 249 (335)
T ss_pred EEcCccCCcCCcEeCCeEEEEECCCCEEEEEcCCCCcEEEE-EECCCCCcccc
Confidence 44578899999999999999999999999999865765544 44334555554
No 90
>KOG0291|consensus
Probab=97.45 E-value=0.15 Score=50.81 Aligned_cols=199 Identities=11% Similarity=0.101 Sum_probs=129.0
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
.+...+.+...+++|=+....-+++....-.... ........+.....+++.+ .+.+..|-...++|.+.+...+.
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEs---YVlKQQgH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~Sgf 383 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSES---YVLKQQGHSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGF 383 (893)
T ss_pred ceeeEEEecccCCEEEEcCCccceEEEEEeeccc---eeeeccccccceeeEEECC-CCcEEEeccCCCcEEEEeccCce
Confidence 3566777777777776666655666555544331 1111222356678899996 56677888889999999998888
Q ss_pred eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC-CCceEEEecCCCCCceEEEEeCC
Q psy13635 151 RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE-GTHRKVLVNTDLVEPRAITLSPA 229 (357)
Q Consensus 151 ~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~-g~~~~~~~~~~~~~P~giavd~~ 229 (357)
+-+.+... .....++.+. ..|+..++-.-.++|...|+. +.+-+++....-.+-..+|+||.
T Consensus 384 C~vTFteH----------------ts~Vt~v~f~-~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~s 446 (893)
T KOG0291|consen 384 CFVTFTEH----------------TSGVTAVQFT-ARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPS 446 (893)
T ss_pred EEEEeccC----------------CCceEEEEEE-ecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCC
Confidence 77665432 2356677777 555666676767788877765 45555555433345578999986
Q ss_pred CCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeC
Q psy13635 230 HGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 230 ~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~ 293 (357)
|.|-.+-.... ..|+...+..+....+++..=.-..+|.+++.+..|+ +-+....|..-+.
T Consensus 447 -GelV~AG~~d~-F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~La-S~SWDkTVRiW~i 507 (893)
T KOG0291|consen 447 -GELVCAGAQDS-FEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLA-SGSWDKTVRIWDI 507 (893)
T ss_pred -CCEEEeeccce-EEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEE-eccccceEEEEEe
Confidence 66666654443 6888888877766666654433347899997666555 4444556666554
No 91
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=97.43 E-value=0.09 Score=49.31 Aligned_cols=221 Identities=19% Similarity=0.235 Sum_probs=110.9
Q ss_pred EEEEE---ccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEE----cCCCe---EEEEeCC--CCEEE
Q psy13635 75 AIDYY---YKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAID----WLTEK---LYWTDSE--TNKLE 142 (357)
Q Consensus 75 ~i~~d---~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd----~~~~~---ly~td~~--~~~I~ 142 (357)
+|.++ +....|.-|+.. +.++.++++|.. ...+.. ..|..+.+- ..++. +..++.. .++|.
T Consensus 58 AIWvnp~dp~kSlIigTdK~-~GL~VYdL~Gk~----lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~ 130 (381)
T PF02333_consen 58 AIWVNPADPAKSLIIGTDKK-GGLYVYDLDGKE----LQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLR 130 (381)
T ss_dssp EEE--SS-GGG-EEEEEETT-TEEEEEETTS-E----EEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEE
T ss_pred cEecCCCCcccceEEEEeCC-CCEEEEcCCCcE----EEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEE
Confidence 34454 445566667765 578888999874 222222 234443331 11222 3445543 25555
Q ss_pred EEEcCCCc--eEEEEecCCCCcceeeeeccCcccccCCceEEE--eCCCCeEEEE-eCCCCeEEEEEc--C--CCceEEE
Q psy13635 143 VSSLDGKK--RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAV--DWVARNLYWT-DTGTDRIEVCRL--E--GTHRKVL 213 (357)
Q Consensus 143 ~~~~~g~~--~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glav--D~~~~~lY~t-d~~~~~I~~~~~--~--g~~~~~~ 213 (357)
.+.++... .+.+... ..| + ...+..|.|+++ ++.++.+|.. ....+.+.+..+ + |...-.+
T Consensus 131 ~f~id~~~g~L~~v~~~--~~p--~------~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~l 200 (381)
T PF02333_consen 131 LFRIDPDTGELTDVTDP--AAP--I------ATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATL 200 (381)
T ss_dssp EEEEETTTTEEEE-CBT--TC---E------E-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEE
T ss_pred EEEecCCCCcceEcCCC--Ccc--c------ccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEE
Confidence 55554322 2222111 111 1 223456788887 5566777654 233356665544 2 3221122
Q ss_pred ec--CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC--C-CceEEEee---CCC-CCceEEEEec---CCCEEEEE
Q psy13635 214 VN--TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN--G-GERVLLVK---DRL-GWPNGITLDV---DNEKLYWC 281 (357)
Q Consensus 214 ~~--~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d--g-~~~~~~~~---~~l-~~P~giaid~---~~~~lY~~ 281 (357)
+. ..-.+|.|+++|...|+||+++.. ..||+...+ + ...+.+.. ..+ ....||++-+ ..++|.++
T Consensus 201 VR~f~~~sQ~EGCVVDDe~g~LYvgEE~---~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivS 277 (381)
T PF02333_consen 201 VREFKVGSQPEGCVVDDETGRLYVGEED---VGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVS 277 (381)
T ss_dssp EEEEE-SS-EEEEEEETTTTEEEEEETT---TEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEE
T ss_pred EEEecCCCcceEEEEecccCCEEEecCc---cEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEE
Confidence 21 123589999999999999999988 589999987 3 33333322 123 3467999943 35789999
Q ss_pred eCCCCeEEEEeCCCCCe----EEEecC----CCCceEEEEEE
Q psy13635 282 DAKTDKIEMIDFDGNNR----RELINE----NLPHVFGISLL 315 (357)
Q Consensus 282 d~~~~~I~~~~~dG~~~----~~i~~~----~~~~p~gia~~ 315 (357)
+.+.+....++..|.+. ..+... ...++.|+++.
T Consensus 278 sQG~~sf~Vy~r~~~~~~~g~f~i~~~~~idg~~eTDG~~v~ 319 (381)
T PF02333_consen 278 SQGDNSFAVYDREGPNAYVGSFRIGDGGGIDGVSETDGIEVV 319 (381)
T ss_dssp EGGGTEEEEEESSTT--EEEEEEEE--SSS----S---EEEE
T ss_pred cCCCCeEEEEecCCCCcccceEEeccCCCccccccCCcceEE
Confidence 99999999999887532 223221 24466777663
No 92
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=97.30 E-value=0.044 Score=50.87 Aligned_cols=174 Identities=16% Similarity=0.116 Sum_probs=100.9
Q ss_pred CcCCceeEEEEcCCCeEEEEeCCCCE------EEEEEcCCC---ce--EEEEecCCCCcceeeeeccCcccccCCceEEE
Q psy13635 115 GLITPDGLAIDWLTEKLYWTDSETNK------LEVSSLDGK---KR--KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAV 183 (357)
Q Consensus 115 ~~~~p~glavd~~~~~ly~td~~~~~------I~~~~~~g~---~~--~~~~~~~~~~p~~i~~~~~~~~~~~~p~glav 183 (357)
.+..-.||++++..+ .||+=++.+. ++...++.. .. ...-...+..+.+..+ ......++||++
T Consensus 18 ~~GGlSgl~~~~~~~-~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~----~~~~~D~Egi~~ 92 (326)
T PF13449_consen 18 PFGGLSGLDYDPDDG-RFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPF----PKNGLDPEGIAV 92 (326)
T ss_pred ccCcEeeEEEeCCCC-EEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcC----CcCCCChhHeEE
Confidence 445568899986444 4554444444 776665541 11 1111111111111111 112227899999
Q ss_pred eCCCCeEEEEeCCC------CeEEEEEcCCCceEEE-ecCCC-------------CCceEEEEeCCCCEEEEEeCCCC--
Q psy13635 184 DWVARNLYWTDTGT------DRIEVCRLEGTHRKVL-VNTDL-------------VEPRAITLSPAHGYLFWSDWNEK-- 241 (357)
Q Consensus 184 D~~~~~lY~td~~~------~~I~~~~~~g~~~~~~-~~~~~-------------~~P~giavd~~~g~Ly~~d~~~~-- 241 (357)
+.++.+||++.+. .+|.+++++|...+.+ +...+ ....+||+.|.+..||.+....-
T Consensus 93 -~~~g~~~is~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~ 171 (326)
T PF13449_consen 93 -PPDGSFWISSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQ 171 (326)
T ss_pred -ecCCCEEEEeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccC
Confidence 5899999999999 9999999999875554 22211 24569999998666888875531
Q ss_pred ----C-------CeEEEEecCC--CceEE-Eee-C------CCCCceEEEEecCCCEEEEEeCC-------CCeEEEEeC
Q psy13635 242 ----R-------PKIERSLLNG--GERVL-LVK-D------RLGWPNGITLDVDNEKLYWCDAK-------TDKIEMIDF 293 (357)
Q Consensus 242 ----~-------~~I~~~~~dg--~~~~~-~~~-~------~l~~P~giaid~~~~~lY~~d~~-------~~~I~~~~~ 293 (357)
. .+|.+.+... ..... .+. . ....+..++.- .++++++.+.. ..+|+.+++
T Consensus 172 d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al-~d~~lLvLER~~~~~~~~~~ri~~v~l 250 (326)
T PF13449_consen 172 DGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAAL-PDGRLLVLERDFSPGTGNYKRIYRVDL 250 (326)
T ss_pred CCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEE-CCCcEEEEEccCCCCccceEEEEEEEc
Confidence 1 3566666553 11222 221 1 23445555554 57789998865 356888887
Q ss_pred CC
Q psy13635 294 DG 295 (357)
Q Consensus 294 dG 295 (357)
.+
T Consensus 251 ~~ 252 (326)
T PF13449_consen 251 SD 252 (326)
T ss_pred cc
Confidence 54
No 93
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=97.25 E-value=0.18 Score=47.35 Aligned_cols=117 Identities=25% Similarity=0.359 Sum_probs=73.4
Q ss_pred CCCCceEEEEe--CCCCEEEEEeCCCCCCeEEEEec--CCCc--eEEEee--CCCCCceEEEEecCCCEEEEEeCCCCeE
Q psy13635 217 DLVEPRAITLS--PAHGYLFWSDWNEKRPKIERSLL--NGGE--RVLLVK--DRLGWPNGITLDVDNEKLYWCDAKTDKI 288 (357)
Q Consensus 217 ~~~~P~giavd--~~~g~Ly~~d~~~~~~~I~~~~~--dg~~--~~~~~~--~~l~~P~giaid~~~~~lY~~d~~~~~I 288 (357)
.+..|+|+++- +.+|.+|..-.+.. +.+....+ ++.. .-.++. .--.+|.|+++|...+.||+++.. .-|
T Consensus 154 ~~~e~yGlcly~~~~~g~~ya~v~~k~-G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LYvgEE~-~GI 231 (381)
T PF02333_consen 154 DLSEPYGLCLYRSPSTGALYAFVNGKD-GRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRLYVGEED-VGI 231 (381)
T ss_dssp SSSSEEEEEEEE-TTT--EEEEEEETT-SEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEEEEETT-TEE
T ss_pred ccccceeeEEeecCCCCcEEEEEecCC-ceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCEEEecCc-cEE
Confidence 45679999984 55677776654433 56666655 2322 112221 123579999999999999999986 589
Q ss_pred EEEeCC--C-CCeEEEec---CCC-CceEEEEEE-----CCEEEEEeCCCCeEEEEeCc
Q psy13635 289 EMIDFD--G-NNRRELIN---ENL-PHVFGISLL-----GDYVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 289 ~~~~~d--G-~~~~~i~~---~~~-~~p~gia~~-----~~~ly~td~~~~~I~~~~~~ 335 (357)
|+++.+ + ...+.+.. ..+ ....||++. .|+|.+++.++++...+++.
T Consensus 232 W~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~ 290 (381)
T PF02333_consen 232 WRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDRE 290 (381)
T ss_dssp EEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESS
T ss_pred EEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecC
Confidence 999875 3 33333321 223 367899985 26899999999988888873
No 94
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.19 E-value=0.12 Score=48.50 Aligned_cols=121 Identities=16% Similarity=0.263 Sum_probs=72.3
Q ss_pred EeCCCC--eEEEEEcCCCceEEEecC----CCCCceEEEEe-CCCC-EEEEEeCCCCCCeEEEEecCCCceEEEeeCCCC
Q psy13635 193 TDTGTD--RIEVCRLEGTHRKVLVNT----DLVEPRAITLS-PAHG-YLFWSDWNEKRPKIERSLLNGGERVLLVKDRLG 264 (357)
Q Consensus 193 td~~~~--~I~~~~~~g~~~~~~~~~----~~~~P~giavd-~~~g-~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~ 264 (357)
.+...+ .+..|+......+.+..+ -+.......+- +.++ .|++++ ..+-.+|+.++.+|...+.+......
T Consensus 203 ~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~-~~G~~hly~~~~~~~~~~~lT~G~~~ 281 (353)
T PF00930_consen 203 LNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISE-RDGYRHLYLYDLDGGKPRQLTSGDWE 281 (353)
T ss_dssp EETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEE-TTSSEEEEEEETTSSEEEESS-SSS-
T ss_pred cccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEE-cCCCcEEEEEcccccceeccccCcee
Confidence 344444 577788765444443332 13333445543 4444 455555 43347999999999886655433322
Q ss_pred CceEEEEecCCCEEEEEeCC----CCeEEEEeCC-CCCeEEEecCCCCceEEEEEE
Q psy13635 265 WPNGITLDVDNEKLYWCDAK----TDKIEMIDFD-GNNRRELINENLPHVFGISLL 315 (357)
Q Consensus 265 ~P~giaid~~~~~lY~~d~~----~~~I~~~~~d-G~~~~~i~~~~~~~p~gia~~ 315 (357)
--.-+.+|..++.||++-.. ...+++++++ |...+.+-.....+ ..+++.
T Consensus 282 V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~-~~~~~S 336 (353)
T PF00930_consen 282 VTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDH-YSASFS 336 (353)
T ss_dssp EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTT-EEEEE-
T ss_pred ecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCc-eEEEEC
Confidence 21347888889999998765 4589999999 77777665544445 455555
No 95
>KOG0291|consensus
Probab=97.18 E-value=0.31 Score=48.76 Aligned_cols=189 Identities=11% Similarity=0.043 Sum_probs=122.6
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD- 147 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~- 147 (357)
.......++|.| +|.+..+...+++|...+...+.+ ..+..+.-....++.+. ..++..++.+-.|+|...++.
T Consensus 349 H~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC---~vTFteHts~Vt~v~f~-~~g~~llssSLDGtVRAwDlkR 423 (893)
T KOG0291|consen 349 HSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFC---FVTFTEHTSGVTAVQFT-ARGNVLLSSSLDGTVRAWDLKR 423 (893)
T ss_pred cccceeeEEECC-CCcEEEeccCCCcEEEEeccCceE---EEEeccCCCceEEEEEE-ecCCEEEEeecCCeEEeeeecc
Confidence 466788999998 566778888899999999988752 44555666778899998 467777788778888888874
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEe
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLS 227 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd 227 (357)
..+-+++. .|+.+ +-..+|+|+.+.-+.......-.|.+-+.......-++.+.-....+|+++
T Consensus 424 YrNfRTft-----~P~p~-----------QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~ 487 (893)
T KOG0291|consen 424 YRNFRTFT-----SPEPI-----------QFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFS 487 (893)
T ss_pred cceeeeec-----CCCce-----------eeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEc
Confidence 33333332 22222 346799998766555555544488888877554444444443445689999
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCCC--ceEEEeeCCCCCceEEEEecCCCEEEEEeC
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNGG--ERVLLVKDRLGWPNGITLDVDNEKLYWCDA 283 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg~--~~~~~~~~~l~~P~giaid~~~~~lY~~d~ 283 (357)
|.+..|+-..|.. .|..-+.-++ ..+++- --....++++-|++..|-++-.
T Consensus 488 ~~~~~LaS~SWDk---TVRiW~if~s~~~vEtl~--i~sdvl~vsfrPdG~elaVaTl 540 (893)
T KOG0291|consen 488 PDGSLLASGSWDK---TVRIWDIFSSSGTVETLE--IRSDVLAVSFRPDGKELAVATL 540 (893)
T ss_pred cccCeEEeccccc---eEEEEEeeccCceeeeEe--eccceeEEEEcCCCCeEEEEEe
Confidence 9888888887774 4444444333 333331 1233456666666666666553
No 96
>KOG1446|consensus
Probab=96.93 E-value=0.28 Score=43.99 Aligned_cols=254 Identities=12% Similarity=0.096 Sum_probs=151.7
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEE-EcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAI-DWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glav-d~~~~~ly~td~~~~~I~~~~~~g 148 (357)
-.++.+++|+..+..+. +...++.|+-.+..... +...+...--.+.-+.+ +.....||-+...+..|+-.++..
T Consensus 14 ~~~i~sl~fs~~G~~li-tss~dDsl~LYd~~~g~---~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~d 89 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLLLI-TSSEDDSLRLYDSLSGK---QVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHD 89 (311)
T ss_pred CCceeEEEecCCCCEEE-EecCCCeEEEEEcCCCc---eeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeec
Confidence 45788999997555554 45556677777766553 23333332223333333 333444555555677888888754
Q ss_pred C-ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEe
Q psy13635 149 K-KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLS 227 (357)
Q Consensus 149 ~-~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd 227 (357)
. ..+.+... -...+.|.+.|.+ ..|.+......|.--|+.-.....++. +..+--.|+|
T Consensus 90 NkylRYF~GH-----------------~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~cqg~l~--~~~~pi~AfD 149 (311)
T KOG1446|consen 90 NKYLRYFPGH-----------------KKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKCQGLLN--LSGRPIAAFD 149 (311)
T ss_pred CceEEEcCCC-----------------CceEEEEEecCCC-CeEEecccCCeEEeeEecCCCCceEEe--cCCCcceeEC
Confidence 4 33333211 1256788888777 678888877788888888666666553 3456678999
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCC---CceEEE-ee-CCCCCceEEEEecCCCEEEEEeCCCCeEEEEe-CCCCCeEEE
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNG---GERVLL-VK-DRLGWPNGITLDVDNEKLYWCDAKTDKIEMID-FDGNNRREL 301 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg---~~~~~~-~~-~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~-~dG~~~~~i 301 (357)
|. |.+|-+-.+++ .|.-.++.. +.-+.+ +. ....+=+.|.+.+++..|.++.. .+.++.++ .+|.-...+
T Consensus 150 p~-GLifA~~~~~~--~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~-~s~~~~lDAf~G~~~~tf 225 (311)
T KOG1446|consen 150 PE-GLIFALANGSE--LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTN-ASFIYLLDAFDGTVKSTF 225 (311)
T ss_pred CC-CcEEEEecCCC--eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeC-CCcEEEEEccCCcEeeeE
Confidence 85 87777766643 666555432 222222 22 22344578888877767776664 45666665 478755444
Q ss_pred ecC--CCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCce
Q psy13635 302 INE--NLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGV 351 (357)
Q Consensus 302 ~~~--~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~ 351 (357)
... ...-|.+-++. ++....+....|+|..-+..+|..+..+......|.
T Consensus 226 s~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~ 278 (311)
T KOG1446|consen 226 SGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPV 278 (311)
T ss_pred eeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCc
Confidence 332 23344333333 455555666778988888888888887766544443
No 97
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=96.92 E-value=0.4 Score=45.55 Aligned_cols=131 Identities=13% Similarity=0.175 Sum_probs=85.0
Q ss_pred EeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEE
Q psy13635 134 TDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVL 213 (357)
Q Consensus 134 td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~ 213 (357)
.+.....+...+.+|...+.+ ...+.....+.+++.+..+-+++. ...|++++.+..+.+.+
T Consensus 377 gt~dgD~l~iyd~~~~e~kr~-----------------e~~lg~I~av~vs~dGK~~vvaNd-r~el~vididngnv~~i 438 (668)
T COG4946 377 GTNDGDKLGIYDKDGGEVKRI-----------------EKDLGNIEAVKVSPDGKKVVVAND-RFELWVIDIDNGNVRLI 438 (668)
T ss_pred eccCCceEEEEecCCceEEEe-----------------eCCccceEEEEEcCCCcEEEEEcC-ceEEEEEEecCCCeeEe
Confidence 333344556666666555444 344556778888866666766654 35899999998877777
Q ss_pred ecCCCCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC
Q psy13635 214 VNTDLVEPRAITLSPAHGYLFWSDWNEK-RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA 283 (357)
Q Consensus 214 ~~~~~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~ 283 (357)
-.+.-....+++++|....+-++=..+. ...|...+++|...--+.. ...+-.+=|+|+++..||+...
T Consensus 439 dkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT-~ta~DfsPaFD~d~ryLYfLs~ 508 (668)
T COG4946 439 DKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT-PTAYDFSPAFDPDGRYLYFLSA 508 (668)
T ss_pred cccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC-CcccccCcccCCCCcEEEEEec
Confidence 6655566788888887666655543321 3578888898876554432 2233334478888999998653
No 98
>KOG0285|consensus
Probab=96.88 E-value=0.18 Score=46.06 Aligned_cols=162 Identities=15% Similarity=0.117 Sum_probs=101.4
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
++...+.....+|||| .+.-|.+.+....|...++........+. +-+....|++|....-.|
T Consensus 146 Vi~gHlgWVr~vavdP-~n~wf~tgs~DrtikIwDlatg~Lkltlt----------------Ghi~~vr~vavS~rHpYl 208 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDP-GNEWFATGSADRTIKIWDLATGQLKLTLT----------------GHIETVRGVAVSKRHPYL 208 (460)
T ss_pred hhhhccceEEEEeeCC-CceeEEecCCCceeEEEEcccCeEEEeec----------------chhheeeeeeecccCceE
Confidence 4444567789999997 57788888888999999987665554432 223468899998777777
Q ss_pred EEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEE
Q psy13635 191 YWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGIT 270 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gia 270 (357)
|-+.. ...|-.-|+.-....--..+.+.....+++.|....|+-+-.. ..+..-++........+...-.....+.
T Consensus 209 Fs~ge-dk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grD---st~RvWDiRtr~~V~~l~GH~~~V~~V~ 284 (460)
T KOG0285|consen 209 FSAGE-DKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRD---STIRVWDIRTRASVHVLSGHTNPVASVM 284 (460)
T ss_pred EEecC-CCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCc---ceEEEeeecccceEEEecCCCCcceeEE
Confidence 75443 3567777776554332233567788999999875555444333 3555555554444444433323335566
Q ss_pred EecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 271 LDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 271 id~~~~~lY~~d~~~~~I~~~~~d 294 (357)
..+.+..+|-+. ....|..-|+.
T Consensus 285 ~~~~dpqvit~S-~D~tvrlWDl~ 307 (460)
T KOG0285|consen 285 CQPTDPQVITGS-HDSTVRLWDLR 307 (460)
T ss_pred eecCCCceEEec-CCceEEEeeec
Confidence 666677776543 34566666653
No 99
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=96.87 E-value=0.22 Score=46.28 Aligned_cols=124 Identities=13% Similarity=0.143 Sum_probs=73.5
Q ss_pred cCCCcEEEEEEEccCCEEE-EEeCCC----CeEEEEEcCCCC--c--cee--EEEEeCC----c----CCceeEEEEcCC
Q psy13635 68 KDLEEGAAIDYYYKKSMVC-WTDHGT----EMISCCTFDGNN--V--GSK--HNVITNG----L----ITPDGLAIDWLT 128 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly-~~d~~~----~~I~~~~~~g~~--~--~~~--~~~~~~~----~----~~p~glavd~~~ 128 (357)
..++...||++++..+.+| ++|... ..+++..++... . ... ...+... + .-++||++ ..+
T Consensus 17 ~~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~-~~~ 95 (326)
T PF13449_consen 17 IPFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAV-PPD 95 (326)
T ss_pred CccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEE-ecC
Confidence 3455678899987566544 334333 126666655411 0 000 1111111 1 16789999 479
Q ss_pred CeEEEEeCCC------CEEEEEEcCCCceEEE-EecCCCCcce-eeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 129 EKLYWTDSET------NKLEVSSLDGKKRKVL-YWEDIDQPRA-IASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 129 ~~ly~td~~~------~~I~~~~~~g~~~~~~-~~~~~~~p~~-i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
+.+||++... .+|.+++.+|...+.+ ++..+..... -. -.......+|||+.+.++.||.+-..
T Consensus 96 g~~~is~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~----~~~~N~G~E~la~~~dG~~l~~~~E~ 167 (326)
T PF13449_consen 96 GSFWISSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTS----GRRNNRGFEGLAVSPDGRTLFAAMES 167 (326)
T ss_pred CCEEEEeCCccCCCCCCEEEEECCCCcccceEccccccccccCccc----cccCCCCeEEEEECCCCCEEEEEECc
Confidence 9999999999 9999999999886655 3332210000 00 01233577899999888778887654
No 100
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.80 E-value=0.54 Score=45.27 Aligned_cols=229 Identities=17% Similarity=0.111 Sum_probs=116.4
Q ss_pred CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC-C--CEEEEEEcCCCceEEEEecCCCCcceeeeec
Q psy13635 93 EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE-T--NKLEVSSLDGKKRKVLYWEDIDQPRAIASYK 169 (357)
Q Consensus 93 ~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~-~--~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~ 169 (357)
..++..+-+|.. ...+.........-+.-+.+..+.+.... . .+|+..+++......+.....
T Consensus 173 ~~l~~~D~dg~~----~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g---------- 238 (425)
T COG0823 173 YELALGDYDGYN----QQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNG---------- 238 (425)
T ss_pred ceEEEEccCCcc----eeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCC----------
Confidence 356666666553 33333322222233333445554443322 2 358888888777766654211
Q ss_pred cCcccccCCceEEEeCCCCeEEEEeCCCC--eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEE
Q psy13635 170 LPTIEVEHPDGVAVDWVARNLYWTDTGTD--RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIER 247 (357)
Q Consensus 170 ~~~~~~~~p~glavD~~~~~lY~td~~~~--~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~ 247 (357)
.-...++-+.+.+|.++....+ .|+.++++++....+.... ..-..=.+.|.+..|+++........|++
T Consensus 239 -------~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~-gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~ 310 (425)
T COG0823 239 -------NNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGF-GINTSPSWSPDGSKIVFTSDRGGRPQIYL 310 (425)
T ss_pred -------ccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCC-ccccCccCCCCCCEEEEEeCCCCCcceEE
Confidence 0111123344567766655444 7999999988765544321 11113345677777777654443589999
Q ss_pred EecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCe--EEEEeCCCCC-eEEEecCCCCceEEEEEECCE-EEEEe
Q psy13635 248 SLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDK--IEMIDFDGNN-RRELINENLPHVFGISLLGDY-VYWTD 323 (357)
Q Consensus 248 ~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~--I~~~~~dG~~-~~~i~~~~~~~p~gia~~~~~-ly~td 323 (357)
++.+|...+.+....-.. ..-.+.+++.+|-+.....+. |...++.... .+.+-......+-..+.++.. +|.+.
T Consensus 311 ~~~~g~~~~riT~~~~~~-~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~ 389 (425)
T COG0823 311 YDLEGSQVTRLTFSGGGN-SNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSG 389 (425)
T ss_pred ECCCCCceeEeeccCCCC-cCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEecc
Confidence 999999876665433221 122344455555555433333 5555553322 333333333344444555544 34444
Q ss_pred CCCCe-EEEEeCccCceeEEEec
Q psy13635 324 WQRRS-IDRVNKITGNDREVIIE 345 (357)
Q Consensus 324 ~~~~~-I~~~~~~~g~~~~~i~~ 345 (357)
...+. +.-+.. +|+....+..
T Consensus 390 ~~~~~~l~~~s~-~g~~~~~~~~ 411 (425)
T COG0823 390 QGGGSVLSLVSL-DGRVSRPLPL 411 (425)
T ss_pred CCCCceEEEeec-cceeEEEEec
Confidence 44344 334444 6666654433
No 101
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=96.78 E-value=0.15 Score=50.38 Aligned_cols=150 Identities=14% Similarity=0.161 Sum_probs=82.9
Q ss_pred EccCCEEEEEeCC-CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC-CCEEEEEEcCCCceEEEEe
Q psy13635 79 YYKKSMVCWTDHG-TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVLYW 156 (357)
Q Consensus 79 d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~-~~~I~~~~~~g~~~~~~~~ 156 (357)
++....+|.+|.. .+.|||+-.+...... .. -.+-.+- .+|.||.+-.. .+.+..+.+..........
T Consensus 255 ~~~~~vvY~gDD~~~~~lYkFVs~~~~~~~-~~--------~~~~~ll-~~GtLyaak~~~~g~~~Wv~L~~~~~~l~~~ 324 (524)
T PF05787_consen 255 DPGRVVVYMGDDGRNGYLYKFVSDKPWDPG-DR--------AANRDLL-DEGTLYAAKFNQDGTGEWVPLGHGQGGLTAK 324 (524)
T ss_pred cCCeEEEEEEecCCCCeEEEEecCCCCCCc-cc--------chhhhhh-hCCEeceEEECCCCcEEEEECCCcccccccC
Confidence 6666678888764 4678887766552000 00 0011111 36777776542 3455555553221000000
Q ss_pred cCCCC-------cceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC-------------------eEEEEEcCCC--
Q psy13635 157 EDIDQ-------PRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD-------------------RIEVCRLEGT-- 208 (357)
Q Consensus 157 ~~~~~-------p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~-------------------~I~~~~~~g~-- 208 (357)
.+... .|.-| ..+-...+..|+|+++++.++.+|++.+... .|.+..+++.
T Consensus 325 ~~~~~~a~v~~~tr~aA-~~~GAT~f~RpEgi~~~p~~g~vY~a~T~~~~r~~~~~~~~n~~~~n~~G~I~r~~~~~~d~ 403 (524)
T PF05787_consen 325 NGFADQADVLIETRRAA-DAVGATPFDRPEGITVNPDDGEVYFALTNNSGRGESDVDAANPRAGNGYGQIYRYDPDGNDH 403 (524)
T ss_pred CCCCChHHhhhhhhhcc-ccCccccccCccCeeEeCCCCEEEEEEecCCCCcccccccCCcccCCcccEEEEecccCCcc
Confidence 00000 00000 0011457889999999999999999865443 7888887765
Q ss_pred -----ceEEEec-----------------CCCCCceEEEEeCCCCEEEEEeCCC
Q psy13635 209 -----HRKVLVN-----------------TDLVEPRAITLSPAHGYLFWSDWNE 240 (357)
Q Consensus 209 -----~~~~~~~-----------------~~~~~P~giavd~~~g~Ly~~d~~~ 240 (357)
....++. ..+..|-.|++|+. |+|++++-+.
T Consensus 404 ~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~~f~sPDNL~~d~~-G~LwI~eD~~ 456 (524)
T PF05787_consen 404 AATTFTWELFLVGGDPTDASGNGSNKCDDNGFASPDNLAFDPD-GNLWIQEDGG 456 (524)
T ss_pred ccceeEEEEEEEecCcccccccccCcccCCCcCCCCceEECCC-CCEEEEeCCC
Confidence 2222211 23678999999985 8888876553
No 102
>KOG0279|consensus
Probab=96.78 E-value=0.35 Score=42.81 Aligned_cols=249 Identities=12% Similarity=0.049 Sum_probs=161.6
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc--ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV--GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
...+++..+.+-.++.+...+..|....+++-+. +....-+...-....++++.+ .++.+++-+..+.++..++.+.
T Consensus 17 ~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~-dg~~alS~swD~~lrlWDl~~g 95 (315)
T KOG0279|consen 17 WVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSS-DGNFALSASWDGTLRLWDLATG 95 (315)
T ss_pred eEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEcc-CCceEEeccccceEEEEEecCC
Confidence 4556666666667777777777777766655431 111222222234567888874 6677778888888998898775
Q ss_pred ce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCC-CCCceEEEEe
Q psy13635 150 KR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTD-LVEPRAITLS 227 (357)
Q Consensus 150 ~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~-~~~P~giavd 227 (357)
.. +.+.... ....+++|++.+ +-.++.....+|..-+.-|.-.-++.... -+....+.+.
T Consensus 96 ~~t~~f~GH~-----------------~dVlsva~s~dn-~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfs 157 (315)
T KOG0279|consen 96 ESTRRFVGHT-----------------KDVLSVAFSTDN-RQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFS 157 (315)
T ss_pred cEEEEEEecC-----------------CceEEEEecCCC-ceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEc
Confidence 33 3343222 256788998544 55567777778888777776655555443 5678889999
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC-CeEEEecCCC
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN-NRRELINENL 306 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~-~~~~i~~~~~ 306 (357)
|.+...++...+.. ..+..-++++-....-........+-+++. .+|.|..+-.+.+.++..+++-. ....+ +.+
T Consensus 158 P~~~~p~Ivs~s~D-ktvKvWnl~~~~l~~~~~gh~~~v~t~~vS-pDGslcasGgkdg~~~LwdL~~~k~lysl--~a~ 233 (315)
T KOG0279|consen 158 PNESNPIIVSASWD-KTVKVWNLRNCQLRTTFIGHSGYVNTVTVS-PDGSLCASGGKDGEAMLWDLNEGKNLYSL--EAF 233 (315)
T ss_pred CCCCCcEEEEccCC-ceEEEEccCCcchhhccccccccEEEEEEC-CCCCEEecCCCCceEEEEEccCCceeEec--cCC
Confidence 98766777666543 577777787766555544555677889997 57888888777888999888644 33322 345
Q ss_pred CceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 307 PHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 307 ~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
....++++.+++.+.+-.....|...+..++..++.+
T Consensus 234 ~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l 270 (315)
T KOG0279|consen 234 DIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEEL 270 (315)
T ss_pred CeEeeEEecCCceeEeeccCCceEEEeccchhhhhhc
Confidence 5566777777665555555556766776556555444
No 103
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=96.67 E-value=0.63 Score=44.27 Aligned_cols=173 Identities=9% Similarity=0.017 Sum_probs=105.4
Q ss_pred EEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeE
Q psy13635 43 MLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGL 122 (357)
Q Consensus 43 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~gl 122 (357)
++.+.++.....++... .+.+.+..-....-..+....+.+.......+.+...+.+|+. ...+..++.+.+.+
T Consensus 334 ~ia~VSRGkaFi~~~~~--~~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e----~kr~e~~lg~I~av 407 (668)
T COG4946 334 YIALVSRGKAFIMRPWD--GYSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE----VKRIEKDLGNIEAV 407 (668)
T ss_pred EEEEEecCcEEEECCCC--CeeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce----EEEeeCCccceEEE
Confidence 44455555555565544 2222222222222222333334555566666688888888885 67788899999999
Q ss_pred EEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC---CCCe
Q psy13635 123 AIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT---GTDR 199 (357)
Q Consensus 123 avd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~---~~~~ 199 (357)
++++.++.+.+++ ....|.+++++....+.+-.+.. .-..++++.+..+.+=.+=. -...
T Consensus 408 ~vs~dGK~~vvaN-dr~el~vididngnv~~idkS~~----------------~lItdf~~~~nsr~iAYafP~gy~tq~ 470 (668)
T COG4946 408 KVSPDGKKVVVAN-DRFELWVIDIDNGNVRLIDKSEY----------------GLITDFDWHPNSRWIAYAFPEGYYTQS 470 (668)
T ss_pred EEcCCCcEEEEEc-CceEEEEEEecCCCeeEeccccc----------------ceeEEEEEcCCceeEEEecCcceeeee
Confidence 9998666676665 46789999998888777643321 12344555544443322211 1246
Q ss_pred EEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCC
Q psy13635 200 IEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWN 239 (357)
Q Consensus 200 I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~ 239 (357)
|...+++|...--+.+ ...+-.+-|+||++.+||+-...
T Consensus 471 Iklydm~~~Kiy~vTT-~ta~DfsPaFD~d~ryLYfLs~R 509 (668)
T COG4946 471 IKLYDMDGGKIYDVTT-PTAYDFSPAFDPDGRYLYFLSAR 509 (668)
T ss_pred EEEEecCCCeEEEecC-CcccccCcccCCCCcEEEEEecc
Confidence 8888888865543332 33444556899999999998755
No 104
>KOG0315|consensus
Probab=96.63 E-value=0.41 Score=41.77 Aligned_cols=278 Identities=12% Similarity=0.073 Sum_probs=162.8
Q ss_pred CeEEEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCC
Q psy13635 41 AQMLLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT 118 (357)
Q Consensus 41 ~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 118 (357)
.|.++.+. ++.|+--.+..+.=...+..+-.+..++.+.++...| +-.....|+-.+++.+.. .........-++
T Consensus 9 ~~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~L--Aaa~~qhvRlyD~~S~np-~Pv~t~e~h~kN 85 (311)
T KOG0315|consen 9 DPVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDL--AAAGNQHVRLYDLNSNNP-NPVATFEGHTKN 85 (311)
T ss_pred CceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchh--hhccCCeeEEEEccCCCC-CceeEEeccCCc
Confidence 45566665 4567766666655555566667788888888755444 444566888889988762 122333334477
Q ss_pred ceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC
Q psy13635 119 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD 198 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~ 198 (357)
...+.|.. .++-.++.+..+.+...++........+... ...+.+.+.|....|+..|.. +
T Consensus 86 VtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~-----------------spVn~vvlhpnQteLis~dqs-g 146 (311)
T KOG0315|consen 86 VTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN-----------------SPVNTVVLHPNQTELISGDQS-G 146 (311)
T ss_pred eEEEEEee-cCeEEEecCCCceEEEEeccCcccchhccCC-----------------CCcceEEecCCcceEEeecCC-C
Confidence 88899986 4555567778888888888764444433211 245788889889999988875 5
Q ss_pred eEEEEEcCCC-ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC-ceEEEee-CCC--C--CceEEEE
Q psy13635 199 RIEVCRLEGT-HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG-ERVLLVK-DRL--G--WPNGITL 271 (357)
Q Consensus 199 ~I~~~~~~g~-~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~-~~~~~~~-~~l--~--~P~giai 271 (357)
.|.+-|+... ....++.+.......++++|++..|--++.. +..+.-++-+. ....+.. ..+ . +.....+
T Consensus 147 ~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnk---G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~l 223 (311)
T KOG0315|consen 147 NIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNK---GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLL 223 (311)
T ss_pred cEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCC---ccEEEEEccCCCccccceEhhheecccceEEEEEE
Confidence 6888777654 3456667777778899999874444333333 45555554332 2222211 111 1 1222334
Q ss_pred ecCCCEEEEEeCCCCeEEEEeCCCCCe-EEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEe
Q psy13635 272 DVDNEKLYWCDAKTDKIEMIDFDGNNR-RELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVII 344 (357)
Q Consensus 272 d~~~~~lY~~d~~~~~I~~~~~dG~~~-~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~ 344 (357)
.+ +++...+-+....+...+.++-.. +..+..+...-.+.++. ++.-.+|-...+.+.--+...|+.+....
T Consensus 224 SP-d~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~ 297 (311)
T KOG0315|consen 224 SP-DVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQ 297 (311)
T ss_pred CC-CCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecC
Confidence 43 444445555556777777777522 22333334456666665 34444444444444444555566554443
No 105
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=96.54 E-value=0.043 Score=54.18 Aligned_cols=79 Identities=15% Similarity=0.249 Sum_probs=51.1
Q ss_pred eCCcCCceeEEEEcCCCeEEEEeCCCC-------------------EEEEEEcCCC-------ceEEEEecCCCC-----
Q psy13635 113 TNGLITPDGLAIDWLTEKLYWTDSETN-------------------KLEVSSLDGK-------KRKVLYWEDIDQ----- 161 (357)
Q Consensus 113 ~~~~~~p~glavd~~~~~ly~td~~~~-------------------~I~~~~~~g~-------~~~~~~~~~~~~----- 161 (357)
...+..|+++++++.++.+|++-+.++ +|+++..++. ..+.++..+-..
T Consensus 346 AT~f~RpEgi~~~p~~g~vY~a~T~~~~r~~~~~~~~n~~~~n~~G~I~r~~~~~~d~~~~~f~~~~~~~~g~~~~~~~~ 425 (524)
T PF05787_consen 346 ATPFDRPEGITVNPDDGEVYFALTNNSGRGESDVDAANPRAGNGYGQIYRYDPDGNDHAATTFTWELFLVGGDPTDASGN 425 (524)
T ss_pred cccccCccCeeEeCCCCEEEEEEecCCCCcccccccCCcccCCcccEEEEecccCCccccceeEEEEEEEecCccccccc
Confidence 345789999999999999999975544 8888887765 222322221100
Q ss_pred cceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 162 PRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 162 p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
..... ....+..|.+|++|+ .|+||+++-.
T Consensus 426 ~~~~~----~~~~f~sPDNL~~d~-~G~LwI~eD~ 455 (524)
T PF05787_consen 426 GSNKC----DDNGFASPDNLAFDP-DGNLWIQEDG 455 (524)
T ss_pred ccCcc----cCCCcCCCCceEECC-CCCEEEEeCC
Confidence 00000 145678999999997 4667766433
No 106
>KOG0272|consensus
Probab=96.42 E-value=0.82 Score=42.73 Aligned_cols=239 Identities=10% Similarity=0.014 Sum_probs=134.3
Q ss_pred eccCCCcEEEEEEEccC-CEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEE
Q psy13635 66 IIKDLEEGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVS 144 (357)
Q Consensus 66 ~~~~~~~~~~i~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~ 144 (357)
....-....+++|+|.. +.=..+-..++.+.-..+++... ..-+.........++++|.++.|--+.. ..+=...
T Consensus 213 l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~---l~~l~gH~~RVs~VafHPsG~~L~Tasf-D~tWRlW 288 (459)
T KOG0272|consen 213 LRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETP---LQDLEGHLARVSRVAFHPSGKFLGTASF-DSTWRLW 288 (459)
T ss_pred EeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcc---hhhhhcchhhheeeeecCCCceeeeccc-ccchhhc
Confidence 33455678899999974 43334444556666666665431 1122233467788999986655543332 2222222
Q ss_pred EcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEE
Q psy13635 145 SLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAI 224 (357)
Q Consensus 145 ~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~gi 224 (357)
++... .+.+...+-. ....++++. ..|.|-.+......=++-|+.......++.+.+....++
T Consensus 289 D~~tk-~ElL~QEGHs---------------~~v~~iaf~-~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V 351 (459)
T KOG0272|consen 289 DLETK-SELLLQEGHS---------------KGVFSIAFQ-PDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSV 351 (459)
T ss_pred ccccc-hhhHhhcccc---------------cccceeEec-CCCceeeccCccchhheeecccCcEEEEecccccceeeE
Confidence 33221 1222222211 245677777 466777665544333334555555555666678889999
Q ss_pred EEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecC
Q psy13635 225 TLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINE 304 (357)
Q Consensus 225 avd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~ 304 (357)
+++| +|+..-|-...+..+|+... +....-.+....+....+.+++..|+..++-+..+.+..-...+-.....+.+
T Consensus 352 ~fsP-NGy~lATgs~Dnt~kVWDLR--~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaG 428 (459)
T KOG0272|consen 352 AFSP-NGYHLATGSSDNTCKVWDLR--MRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAG 428 (459)
T ss_pred eECC-CceEEeecCCCCcEEEeeec--ccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcC
Confidence 9998 58887777765434555444 44333333344455667888877888888888887777766554433333334
Q ss_pred CCCceEEEEEEC-CEEEEEeCCCCe
Q psy13635 305 NLPHVFGISLLG-DYVYWTDWQRRS 328 (357)
Q Consensus 305 ~~~~p~gia~~~-~~ly~td~~~~~ 328 (357)
.-....++++.. +....|....++
T Consensus 429 He~kV~s~Dis~d~~~i~t~s~DRT 453 (459)
T KOG0272|consen 429 HEGKVISLDISPDSQAIATSSFDRT 453 (459)
T ss_pred CccceEEEEeccCCceEEEeccCce
Confidence 555666777663 444444444333
No 107
>PTZ00420 coronin; Provisional
Probab=96.41 E-value=1.2 Score=44.50 Aligned_cols=212 Identities=7% Similarity=-0.010 Sum_probs=117.9
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc-c----eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEE
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV-G----SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLE 142 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~----~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~ 142 (357)
........++|++..+.+..+-..++.|+..++..... . +....+...-.....+++++.+..++.+-+..+.|.
T Consensus 72 gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIr 151 (568)
T PTZ00420 72 GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVN 151 (568)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEE
Confidence 34456889999987666777777788888888753210 0 001122223345788999987777777777788999
Q ss_pred EEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCce
Q psy13635 143 VSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPR 222 (357)
Q Consensus 143 ~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~ 222 (357)
..++........+... .....+++++. |.++.+....+.|...++.......-.........
T Consensus 152 IWDl~tg~~~~~i~~~-----------------~~V~Slswspd-G~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~ 213 (568)
T PTZ00420 152 IWDIENEKRAFQINMP-----------------KKLSSLKWNIK-GNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKN 213 (568)
T ss_pred EEECCCCcEEEEEecC-----------------CcEEEEEECCC-CCEEEEEecCCEEEEEECCCCcEEEEEecccCCce
Confidence 9998755432211110 13567888864 45556655567888888875433222211111111
Q ss_pred EEE-----EeCCCCEEEEEeCCCC-CCeEEEEecCC--CceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 223 AIT-----LSPAHGYLFWSDWNEK-RPKIERSLLNG--GERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 223 gia-----vd~~~g~Ly~~d~~~~-~~~I~~~~~dg--~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
..+ +.+..++|.-+-.... .+.|...++.. ..........-..+.--..|+.++.+|++-.+.+.|+..+..
T Consensus 214 s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~ 293 (568)
T PTZ00420 214 TKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHS 293 (568)
T ss_pred eEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEcc
Confidence 112 1244445554443321 12455555542 212221111111111124566778999998889999999885
Q ss_pred CCC
Q psy13635 295 GNN 297 (357)
Q Consensus 295 G~~ 297 (357)
...
T Consensus 294 ~~~ 296 (568)
T PTZ00420 294 LGS 296 (568)
T ss_pred CCc
Confidence 443
No 108
>PTZ00421 coronin; Provisional
Probab=96.32 E-value=1.2 Score=43.75 Aligned_cols=213 Identities=6% Similarity=-0.054 Sum_probs=119.3
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc----eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEE
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG----SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEV 143 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~----~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~ 143 (357)
..-....+++|++.++.+..+-..++.|...++...... .....+...-.....+++.+..++++++-..++.|..
T Consensus 73 GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrI 152 (493)
T PTZ00421 73 GQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNV 152 (493)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEE
Confidence 345567899999855556667667788887776543210 0122233333456788998876778888778899999
Q ss_pred EEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCc-eEEEecCCCCCce
Q psy13635 144 SSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTH-RKVLVNTDLVEPR 222 (357)
Q Consensus 144 ~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~-~~~~~~~~~~~P~ 222 (357)
.++........+.. .-....++++.+ .+.+.++....+.|...|+.... ...+....-....
T Consensus 153 WDl~tg~~~~~l~~----------------h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~ 215 (493)
T PTZ00421 153 WDVERGKAVEVIKC----------------HSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQ 215 (493)
T ss_pred EECCCCeEEEEEcC----------------CCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcce
Confidence 99875433222211 112356778875 45666677777889888876433 2222211111223
Q ss_pred EEEEeCCCCEEEEEeCCC-CCCeEEEEecCCCc-eEEEeeCCC-CCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 223 AITLSPAHGYLFWSDWNE-KRPKIERSLLNGGE-RVLLVKDRL-GWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 223 giavd~~~g~Ly~~d~~~-~~~~I~~~~~dg~~-~~~~~~~~l-~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
.+...+..+.+..+-... ..+.|...++.... ......... .......+|+....||.+-.+.+.|+..++....
T Consensus 216 ~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~ 293 (493)
T PTZ00421 216 RCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER 293 (493)
T ss_pred EEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence 445555555555443211 12456666654322 111111111 1112235676677777776667888888886543
No 109
>KOG0263|consensus
Probab=96.26 E-value=1.5 Score=44.02 Aligned_cols=204 Identities=14% Similarity=0.126 Sum_probs=120.5
Q ss_pred cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCcee-EEEEcCCCeEEEEeCCCCE
Q psy13635 62 KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDG-LAIDWLTEKLYWTDSETNK 140 (357)
Q Consensus 62 ~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~g-lavd~~~~~ly~td~~~~~ 140 (357)
....+...-+...+..|.| +++..++...+..++-.+++... -.+.-.|-..|.. +.|.| .|.-|.|-+..++
T Consensus 443 ~~~~L~GH~GPVyg~sFsP-d~rfLlScSED~svRLWsl~t~s----~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~t 516 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSP-DRRFLLSCSEDSSVRLWSLDTWS----CLVIYKGHLAPVWDVQFAP-RGYYFATASHDQT 516 (707)
T ss_pred eeEEeecCCCceeeeeecc-cccceeeccCCcceeeeecccce----eEEEecCCCcceeeEEecC-CceEEEecCCCce
Confidence 3444556666788999988 45566676666777777776653 3344445555554 55664 4444444444444
Q ss_pred EEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-CCeEEEEEcC-CCceEEEecCCC
Q psy13635 141 LEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-TDRIEVCRLE-GTHRKVLVNTDL 218 (357)
Q Consensus 141 I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-~~~I~~~~~~-g~~~~~~~~~~~ 218 (357)
-.....|......++ ..-+.....+++.|... |++..+ ..+++.-+.. |..++.+ .+..
T Consensus 517 ArLWs~d~~~PlRif----------------aghlsDV~cv~FHPNs~--Y~aTGSsD~tVRlWDv~~G~~VRiF-~GH~ 577 (707)
T KOG0263|consen 517 ARLWSTDHNKPLRIF----------------AGHLSDVDCVSFHPNSN--YVATGSSDRTVRLWDVSTGNSVRIF-TGHK 577 (707)
T ss_pred eeeeecccCCchhhh----------------cccccccceEEECCccc--ccccCCCCceEEEEEcCCCcEEEEe-cCCC
Confidence 333444444443333 23344666788886544 444333 4455555544 4444444 4445
Q ss_pred CCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 219 VEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 219 ~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
.....++++|.+.+|--.+.. +.|..-++.++.........-..-..|.+. .+|.+.++....+.|..-|..
T Consensus 578 ~~V~al~~Sp~Gr~LaSg~ed---~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS-~dg~vLasgg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 578 GPVTALAFSPCGRYLASGDED---GLIKIWDLANGSLVKQLKGHTGTIYSLSFS-RDGNVLASGGADNSVRLWDLT 649 (707)
T ss_pred CceEEEEEcCCCceEeecccC---CcEEEEEcCCCcchhhhhcccCceeEEEEe-cCCCEEEecCCCCeEEEEEch
Confidence 566799999864334333332 678888887655543333335566788887 678888999888888887764
No 110
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=96.22 E-value=1.1 Score=42.25 Aligned_cols=229 Identities=10% Similarity=0.083 Sum_probs=113.9
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCceEEEEecCCC
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKVLYWEDID 160 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~~~~ 160 (357)
++.+|+... ++.++.++.+.+. .....-..+. .....+++ ++.+|+.. ..+.++.++.. |+..-..- . .
T Consensus 105 ~~~v~v~~~-~g~l~ald~~tG~--~~W~~~~~~~-~~~~p~v~--~~~v~v~~-~~g~l~a~d~~tG~~~W~~~-~--~ 174 (377)
T TIGR03300 105 GGLVFVGTE-KGEVIALDAEDGK--ELWRAKLSSE-VLSPPLVA--NGLVVVRT-NDGRLTALDAATGERLWTYS-R--V 174 (377)
T ss_pred CCEEEEEcC-CCEEEEEECCCCc--EeeeeccCce-eecCCEEE--CCEEEEEC-CCCeEEEEEcCCCceeeEEc-c--C
Confidence 678887654 4678888875332 1121111111 01112333 56777754 46778888874 44321111 0 0
Q ss_pred CcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC-CCceEEEecC-CC--C-------CceEEEEeCC
Q psy13635 161 QPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE-GTHRKVLVNT-DL--V-------EPRAITLSPA 229 (357)
Q Consensus 161 ~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~-g~~~~~~~~~-~~--~-------~P~giavd~~ 229 (357)
.+ .+ ........++. ++.+|+... .+++..+++. |+..-..... .. . ......++
T Consensus 175 ~~-~~--------~~~~~~sp~~~--~~~v~~~~~-~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~-- 240 (377)
T TIGR03300 175 TP-AL--------TLRGSASPVIA--DGGVLVGFA-GGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVD-- 240 (377)
T ss_pred CC-ce--------eecCCCCCEEE--CCEEEEECC-CCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEE--
Confidence 00 00 00000111222 346665443 3567777763 4332111000 00 0 00112233
Q ss_pred CCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCC--
Q psy13635 230 HGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLP-- 307 (357)
Q Consensus 230 ~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~-- 307 (357)
++.+|.+... +.+...+...... +.......+...++ .+++||+.+ ..+.++.++.+.....--. +.+.
T Consensus 241 ~~~vy~~~~~---g~l~a~d~~tG~~--~W~~~~~~~~~p~~--~~~~vyv~~-~~G~l~~~d~~tG~~~W~~-~~~~~~ 311 (377)
T TIGR03300 241 GGQVYAVSYQ---GRVAALDLRSGRV--LWKRDASSYQGPAV--DDNRLYVTD-ADGVVVALDRRSGSELWKN-DELKYR 311 (377)
T ss_pred CCEEEEEEcC---CEEEEEECCCCcE--EEeeccCCccCceE--eCCEEEEEC-CCCeEEEEECCCCcEEEcc-ccccCC
Confidence 5789998876 5788888753322 22222233344455 478999987 4678999998533221111 0111
Q ss_pred ceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEe
Q psy13635 308 HVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVII 344 (357)
Q Consensus 308 ~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~ 344 (357)
......+.++.+|+.+ .++.|+.++..+|+....+.
T Consensus 312 ~~ssp~i~g~~l~~~~-~~G~l~~~d~~tG~~~~~~~ 347 (377)
T TIGR03300 312 QLTAPAVVGGYLVVGD-FEGYLHWLSREDGSFVARLK 347 (377)
T ss_pred ccccCEEECCEEEEEe-CCCEEEEEECCCCCEEEEEE
Confidence 1122345688999887 44789999987888776553
No 111
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=96.14 E-value=1.3 Score=42.20 Aligned_cols=225 Identities=14% Similarity=0.136 Sum_probs=114.5
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCceEEEEecCCC
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKVLYWEDID 160 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~~~~ 160 (357)
++++|+.+. ++.++.++.+.+.. ....-..+.. -...++. ++.+|+.. .++++..++.. |+..=.. .. .
T Consensus 120 ~~~v~v~~~-~g~l~ald~~tG~~--~W~~~~~~~~-~ssP~v~--~~~v~v~~-~~g~l~ald~~tG~~~W~~-~~--~ 189 (394)
T PRK11138 120 GGKVYIGSE-KGQVYALNAEDGEV--AWQTKVAGEA-LSRPVVS--DGLVLVHT-SNGMLQALNESDGAVKWTV-NL--D 189 (394)
T ss_pred CCEEEEEcC-CCEEEEEECCCCCC--cccccCCCce-ecCCEEE--CCEEEEEC-CCCEEEEEEccCCCEeeee-cC--C
Confidence 688888763 46788888754321 1221111110 1122343 56777755 45678888874 4432111 11 1
Q ss_pred CcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC-CCceEEE--ecC-----------CCCCceEEEE
Q psy13635 161 QPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE-GTHRKVL--VNT-----------DLVEPRAITL 226 (357)
Q Consensus 161 ~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~-g~~~~~~--~~~-----------~~~~P~giav 226 (357)
.|. +. ......| +++ ++.+|+... .+++..++.. |+..-.. ... ....| .+
T Consensus 190 ~~~-~~-----~~~~~sP---~v~--~~~v~~~~~-~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP---~v 254 (394)
T PRK11138 190 VPS-LT-----LRGESAP---ATA--FGGAIVGGD-NGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTP---VV 254 (394)
T ss_pred CCc-cc-----ccCCCCC---EEE--CCEEEEEcC-CCEEEEEEccCChhhheeccccCCCccchhcccccCCCc---EE
Confidence 000 00 0001122 222 345666543 3556665544 3322111 000 00122 23
Q ss_pred eCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCC
Q psy13635 227 SPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENL 306 (357)
Q Consensus 227 d~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~ 306 (357)
. ++.+|++... +.+...+...... +....+..+..+++ .+++||+.+. .+.++.++.......-- .+..
T Consensus 255 ~--~~~vy~~~~~---g~l~ald~~tG~~--~W~~~~~~~~~~~~--~~~~vy~~~~-~g~l~ald~~tG~~~W~-~~~~ 323 (394)
T PRK11138 255 V--GGVVYALAYN---GNLVALDLRSGQI--VWKREYGSVNDFAV--DGGRIYLVDQ-NDRVYALDTRGGVELWS-QSDL 323 (394)
T ss_pred E--CCEEEEEEcC---CeEEEEECCCCCE--EEeecCCCccCcEE--ECCEEEEEcC-CCeEEEEECCCCcEEEc-cccc
Confidence 3 5889988765 5788888764422 23333344444555 4789999875 57899998854322110 1111
Q ss_pred --CceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 307 --PHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 307 --~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
....+.++.++.||+.+. .+.|+.++..+|+.....
T Consensus 324 ~~~~~~sp~v~~g~l~v~~~-~G~l~~ld~~tG~~~~~~ 361 (394)
T PRK11138 324 LHRLLTAPVLYNGYLVVGDS-EGYLHWINREDGRFVAQQ 361 (394)
T ss_pred CCCcccCCEEECCEEEEEeC-CCEEEEEECCCCCEEEEE
Confidence 112233456889998874 478888998888866543
No 112
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.05 E-value=1.1 Score=40.71 Aligned_cols=193 Identities=14% Similarity=0.129 Sum_probs=117.6
Q ss_pred EEEcCCCeEEEEeC----CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC
Q psy13635 123 AIDWLTEKLYWTDS----ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD 198 (357)
Q Consensus 123 avd~~~~~ly~td~----~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~ 198 (357)
++++.++.||.|+. +.+.|.+.+...+..++--.. . ..-.|..|.+.+.+..|.+++.+-.
T Consensus 57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~--------------s-~GIGPHel~l~pDG~tLvVANGGI~ 121 (305)
T PF07433_consen 57 VFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFP--------------S-HGIGPHELLLMPDGETLVVANGGIE 121 (305)
T ss_pred EEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEec--------------C-CCcChhhEEEcCCCCEEEEEcCCCc
Confidence 46667888998864 468899999885555442211 1 1236889999887779999886621
Q ss_pred -----------------eEEEE-EcCCCceEEEec-C--CCCCceEEEEeCCCCEEEEEeCCCC-----CCeEEEEecCC
Q psy13635 199 -----------------RIEVC-RLEGTHRKVLVN-T--DLVEPRAITLSPAHGYLFWSDWNEK-----RPKIERSLLNG 252 (357)
Q Consensus 199 -----------------~I~~~-~~~g~~~~~~~~-~--~~~~P~giavd~~~g~Ly~~d~~~~-----~~~I~~~~~dg 252 (357)
.+... ..+|+....... . ....-+-|+++.. |.+.++..... ..-+.....++
T Consensus 122 Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~-G~V~~a~Q~qg~~~~~~PLva~~~~g~ 200 (305)
T PF07433_consen 122 THPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGD-GTVAFAMQYQGDPGDAPPLVALHRRGG 200 (305)
T ss_pred cCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCC-CcEEEEEecCCCCCccCCeEEEEcCCC
Confidence 22333 233443333211 1 1224678999964 88888765432 12233333332
Q ss_pred CceEEEee-C----C-CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCC
Q psy13635 253 GERVLLVK-D----R-LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQR 326 (357)
Q Consensus 253 ~~~~~~~~-~----~-l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~ 326 (357)
. .+.+-. . . -.+.-+|+++...+.+.+|....+++...+.+.... +....+....|++...+. |+..++.
T Consensus 201 ~-~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~--~~~~~l~D~cGva~~~~~-f~~ssG~ 276 (305)
T PF07433_consen 201 A-LRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRL--LGSVPLPDACGVAPTDDG-FLVSSGQ 276 (305)
T ss_pred c-ceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCE--eeccccCceeeeeecCCc-eEEeCCC
Confidence 2 222111 1 1 245668999977778889999999999997644333 222357788899988655 5556677
Q ss_pred CeEEEEeCc
Q psy13635 327 RSIDRVNKI 335 (357)
Q Consensus 327 ~~I~~~~~~ 335 (357)
|.+......
T Consensus 277 G~~~~~~~~ 285 (305)
T PF07433_consen 277 GQLIRLSPD 285 (305)
T ss_pred ccEEEccCc
Confidence 888887763
No 113
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.02 E-value=0.92 Score=39.44 Aligned_cols=186 Identities=15% Similarity=0.150 Sum_probs=102.7
Q ss_pred cCCEEEEEeCCCCeEEEEEcCCCCcceeEE-EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEE-cCCCceEEEEecC
Q psy13635 81 KKSMVCWTDHGTEMISCCTFDGNNVGSKHN-VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSS-LDGKKRKVLYWED 158 (357)
Q Consensus 81 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~ 158 (357)
.++.+|.++ ..+.|+.++...+. ...+ .+...+..+ ..++ ++.+|+... .++|..++ .+|...-......
T Consensus 35 ~~~~v~~~~-~~~~l~~~d~~tG~--~~W~~~~~~~~~~~--~~~~--~~~v~v~~~-~~~l~~~d~~tG~~~W~~~~~~ 106 (238)
T PF13360_consen 35 DGGRVYVAS-GDGNLYALDAKTGK--VLWRFDLPGPISGA--PVVD--GGRVYVGTS-DGSLYALDAKTGKVLWSIYLTS 106 (238)
T ss_dssp ETTEEEEEE-TTSEEEEEETTTSE--EEEEEECSSCGGSG--EEEE--TTEEEEEET-TSEEEEEETTTSCEEEEEEE-S
T ss_pred eCCEEEEEc-CCCEEEEEECCCCC--EEEEeeccccccce--eeec--ccccccccc-eeeeEecccCCcceeeeecccc
Confidence 378888885 56788888874432 1122 222233333 3554 788988874 34899999 5565543322211
Q ss_pred CCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC-CCceEEEecCC--CCC--------ceEEEEe
Q psy13635 159 IDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE-GTHRKVLVNTD--LVE--------PRAITLS 227 (357)
Q Consensus 159 ~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~-g~~~~~~~~~~--~~~--------P~giavd 227 (357)
. + ...+..+...+++ ++.+|+... .+.|..+++. |+..-...... ... ...+.++
T Consensus 107 ~-~----------~~~~~~~~~~~~~--~~~~~~~~~-~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (238)
T PF13360_consen 107 S-P----------PAGVRSSSSPAVD--GDRLYVGTS-SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS 172 (238)
T ss_dssp S-C----------TCSTB--SEEEEE--TTEEEEEET-CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC
T ss_pred c-c----------ccccccccCceEe--cCEEEEEec-cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE
Confidence 0 0 1112344555555 677887775 4678888865 54433222111 001 1233333
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
++.+|++... +.+..++....... .......+.++.. ..++.||+.+ ..+.++.+|+....
T Consensus 173 --~~~v~~~~~~---g~~~~~d~~tg~~~--w~~~~~~~~~~~~-~~~~~l~~~~-~~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 173 --DGRVYVSSGD---GRVVAVDLATGEKL--WSKPISGIYSLPS-VDGGTLYVTS-SDGRLYALDLKTGK 233 (238)
T ss_dssp --TTEEEEECCT---SSEEEEETTTTEEE--EEECSS-ECECEE-CCCTEEEEEE-TTTEEEEEETTTTE
T ss_pred --CCEEEEEcCC---CeEEEEECCCCCEE--EEecCCCccCCce-eeCCEEEEEe-CCCEEEEEECCCCC
Confidence 5699998876 34555576665533 2222444444222 4789999998 67899999876543
No 114
>KOG4649|consensus
Probab=96.00 E-value=0.47 Score=41.78 Aligned_cols=141 Identities=18% Similarity=0.147 Sum_probs=81.5
Q ss_pred EEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee
Q psy13635 181 VAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK 260 (357)
Q Consensus 181 lavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~ 260 (357)
+|||+..|++||-..-..||+... .+. +++ +.+-..+|.||+-+..+. .+++....-++....
T Consensus 36 ~avd~~sG~~~We~ilg~RiE~sa-------~vv-gdf-----VV~GCy~g~lYfl~~~tG-s~~w~f~~~~~vk~~--- 98 (354)
T KOG4649|consen 36 IAVDPQSGNLIWEAILGVRIECSA-------IVV-GDF-----VVLGCYSGGLYFLCVKTG-SQIWNFVILETVKVR--- 98 (354)
T ss_pred EEecCCCCcEEeehhhCceeeeee-------EEE-CCE-----EEEEEccCcEEEEEecch-hheeeeeehhhhccc---
Confidence 588999999999877667776532 222 122 566667899999998864 577776654432211
Q ss_pred CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCc--eEE--EEEECCEEEEEeCCCCeEEEEeCcc
Q psy13635 261 DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPH--VFG--ISLLGDYVYWTDWQRRSIDRVNKIT 336 (357)
Q Consensus 261 ~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~--p~g--ia~~~~~ly~td~~~~~I~~~~~~~ 336 (357)
-..|.+++.||. -+..+..+..|+..... +...+.+. -.+ |+.-.+.||++-.. |.|.++++.+
T Consensus 99 --------a~~d~~~glIyc-gshd~~~yalD~~~~~c--VykskcgG~~f~sP~i~~g~~sly~a~t~-G~vlavt~~~ 166 (354)
T KOG4649|consen 99 --------AQCDFDGGLIYC-GSHDGNFYALDPKTYGC--VYKSKCGGGTFVSPVIAPGDGSLYAAITA-GAVLAVTKNP 166 (354)
T ss_pred --------eEEcCCCceEEE-ecCCCcEEEecccccce--EEecccCCceeccceecCCCceEEEEecc-ceEEEEccCC
Confidence 124434444443 34455566666543332 11111111 111 33335789998754 7888888877
Q ss_pred CceeEEEecccCCc
Q psy13635 337 GNDREVIIERSCTG 350 (357)
Q Consensus 337 g~~~~~i~~~l~~p 350 (357)
+...+.......+|
T Consensus 167 ~~~~~~w~~~~~~P 180 (354)
T KOG4649|consen 167 YSSTEFWAATRFGP 180 (354)
T ss_pred CCcceehhhhcCCc
Confidence 76666555544444
No 115
>KOG0315|consensus
Probab=95.98 E-value=0.99 Score=39.48 Aligned_cols=251 Identities=13% Similarity=0.087 Sum_probs=135.5
Q ss_pred ecCCCCeEEEEEeCCcEEEEEcCCCCc-ceEeccC-CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe
Q psy13635 36 SHHVAAQMLLFATSKDIRIANLSRPLK-PVTIIKD-LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 36 ~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~-~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
...+++.+|..+....|+.+|+..+.. .....+. -++..++.|..++..+ ++...++.++.-++..-. .+....
T Consensus 47 eiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWM-yTgseDgt~kIWdlR~~~---~qR~~~ 122 (311)
T KOG0315|consen 47 EITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWM-YTGSEDGTVKIWDLRSLS---CQRNYQ 122 (311)
T ss_pred EEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEE-EecCCCceEEEEeccCcc---cchhcc
Confidence 344555666666667799999987543 3333333 3678899998755544 466677777777776543 122222
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC-ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK-KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW 192 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~-~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~ 192 (357)
.. .-...+.+.+....|+.+|. ++.|.+.++... ....++++. ......++|+|.+..|-
T Consensus 123 ~~-spVn~vvlhpnQteLis~dq-sg~irvWDl~~~~c~~~liPe~----------------~~~i~sl~v~~dgsml~- 183 (311)
T KOG0315|consen 123 HN-SPVNTVVLHPNQTELISGDQ-SGNIRVWDLGENSCTHELIPED----------------DTSIQSLTVMPDGSMLA- 183 (311)
T ss_pred CC-CCcceEEecCCcceEEeecC-CCcEEEEEccCCccccccCCCC----------------CcceeeEEEcCCCcEEE-
Confidence 22 34566888888888888885 678998888655 233343332 23456778886554444
Q ss_pred EeCCCCeEEEEEcCC-CceEEEec-----CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC-ceEEEeeCCCCC
Q psy13635 193 TDTGTDRIEVCRLEG-THRKVLVN-----TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG-ERVLLVKDRLGW 265 (357)
Q Consensus 193 td~~~~~I~~~~~~g-~~~~~~~~-----~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~-~~~~~~~~~l~~ 265 (357)
+-...++-++-++-+ .....+.. ..-.+....-++|...+| .|.... ..+...+.++- ..+..+..+-.+
T Consensus 184 a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~l-at~ssd--ktv~iwn~~~~~kle~~l~gh~rW 260 (311)
T KOG0315|consen 184 AANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYL-ATCSSD--KTVKIWNTDDFFKLELVLTGHQRW 260 (311)
T ss_pred EecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEE-EeecCC--ceEEEEecCCceeeEEEeecCCce
Confidence 333344444443332 11111111 112234456677764444 333332 36666666665 223333344456
Q ss_pred ceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEE
Q psy13635 266 PNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGIS 313 (357)
Q Consensus 266 P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia 313 (357)
.-+-++..++.+| ++-+..+.+..-++.............+.+..++
T Consensus 261 vWdc~FS~dg~Yl-vTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ 307 (311)
T KOG0315|consen 261 VWDCAFSADGEYL-VTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVA 307 (311)
T ss_pred EEeeeeccCccEE-EecCCCCceeecccccCceeeecCCcccccEEEE
Confidence 6677776444444 4443345555555544333333333344444333
No 116
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=95.91 E-value=0.034 Score=40.56 Aligned_cols=36 Identities=22% Similarity=0.401 Sum_probs=31.6
Q ss_pred eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 259 VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 259 ~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
+.+++..|+||++++....||+++...+.|+.....
T Consensus 49 va~g~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 49 VASGFSFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred eeccCCCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 447889999999999999999999999999888653
No 117
>PRK13616 lipoprotein LpqB; Provisional
Probab=95.84 E-value=2.4 Score=42.76 Aligned_cols=187 Identities=16% Similarity=0.113 Sum_probs=106.2
Q ss_pred CCceeEEEEcCCCeEEEEeC-------CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 117 ITPDGLAIDWLTEKLYWTDS-------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~-------~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
..+...++.+.++.+.++.. ...+|+..+..|..........+. .| .+++.++.
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~~~t----------------~P---sWspDG~~ 410 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGHSLT----------------RP---SWSLDADA 410 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCCCCC----------------Cc---eECCCCCc
Confidence 46778889888888766652 234788877766553332111111 22 34444455
Q ss_pred EEEEeCC-----------CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEE---EecCCCce
Q psy13635 190 LYWTDTG-----------TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIER---SLLNGGER 255 (357)
Q Consensus 190 lY~td~~-----------~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~---~~~dg~~~ 255 (357)
|++...+ .+.+++...++..... ..-..+..+.++|+..+|.+.-. ++|+. ...+++.
T Consensus 411 lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~~----g~v~Va~Vvr~~~G~- 482 (591)
T PRK13616 411 VWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMIIG----GKVYLAVVEQTEDGQ- 482 (591)
T ss_pred eEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEEC----CEEEEEEEEeCCCCc-
Confidence 5544222 2345555555433322 11135888999998888888763 36666 4434433
Q ss_pred EEE-----eeCCCCC-ceEEEEecCCCEEEEEeCC-CCeEEEEeCCCCCeEEEecCCCCce-EEEEEECCEEEEEeCCCC
Q psy13635 256 VLL-----VKDRLGW-PNGITLDVDNEKLYWCDAK-TDKIEMIDFDGNNRRELINENLPHV-FGISLLGDYVYWTDWQRR 327 (357)
Q Consensus 256 ~~~-----~~~~l~~-P~giaid~~~~~lY~~d~~-~~~I~~~~~dG~~~~~i~~~~~~~p-~gia~~~~~ly~td~~~~ 327 (357)
..+ +...+.. +..++-- .++.|++.... ...++.+.+||...+.+...++..| ..|+-..+.+|++|..
T Consensus 483 ~~l~~~~~l~~~l~~~~~~l~W~-~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~~iyv~~~~-- 559 (591)
T PRK13616 483 YALTNPREVGPGLGDTAVSLDWR-TGDSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPSTVYVTDAR-- 559 (591)
T ss_pred eeecccEEeecccCCccccceEe-cCCEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCceEEEEcCC--
Confidence 222 2233443 4666664 56778776543 3569999999988664333333333 4566666789999855
Q ss_pred eEEEEe
Q psy13635 328 SIDRVN 333 (357)
Q Consensus 328 ~I~~~~ 333 (357)
.+....
T Consensus 560 g~~~l~ 565 (591)
T PRK13616 560 AVLQLP 565 (591)
T ss_pred ceEEec
Confidence 455554
No 118
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=95.79 E-value=1.8 Score=40.88 Aligned_cols=217 Identities=12% Similarity=0.120 Sum_probs=111.8
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEE-EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCceEEEEecCC
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHN-VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKVLYWEDI 159 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~~~ 159 (357)
++++|+.+.. +.++.++...+. .... -+.... ..+++++ ++.+|+... ++.++.++.+ |+..-.. ..
T Consensus 65 ~~~v~v~~~~-g~v~a~d~~tG~--~~W~~~~~~~~--~~~p~v~--~~~v~v~~~-~g~l~ald~~tG~~~W~~---~~ 133 (377)
T TIGR03300 65 GGKVYAADAD-GTVVALDAETGK--RLWRVDLDERL--SGGVGAD--GGLVFVGTE-KGEVIALDAEDGKELWRA---KL 133 (377)
T ss_pred CCEEEEECCC-CeEEEEEccCCc--EeeeecCCCCc--ccceEEc--CCEEEEEcC-CCEEEEEECCCCcEeeee---cc
Confidence 6788887654 678888864332 1111 122221 2345666 788888764 5788888874 5433211 11
Q ss_pred CCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC-CCceEEEecCC----CCCceEEEEeCCCCEEE
Q psy13635 160 DQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE-GTHRKVLVNTD----LVEPRAITLSPAHGYLF 234 (357)
Q Consensus 160 ~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~-g~~~~~~~~~~----~~~P~giavd~~~g~Ly 234 (357)
.. .....| +++ ++.+|+... .+.+...+.. |+..-...... .......++. ++.+|
T Consensus 134 ~~-----------~~~~~p---~v~--~~~v~v~~~-~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~ 194 (377)
T TIGR03300 134 SS-----------EVLSPP---LVA--NGLVVVRTN-DGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVL 194 (377)
T ss_pred Cc-----------eeecCC---EEE--CCEEEEECC-CCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEE
Confidence 00 000112 222 456776543 4567777763 44332221110 0000111222 35677
Q ss_pred EEeCCCCCCeEEEEecC-CCceEEEeeCCCCCc-------------eEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEE
Q psy13635 235 WSDWNEKRPKIERSLLN-GGERVLLVKDRLGWP-------------NGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRE 300 (357)
Q Consensus 235 ~~d~~~~~~~I~~~~~d-g~~~~~~~~~~l~~P-------------~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~ 300 (357)
+.... +.+...++. |...... ....| ....+ .++.+|++.. .+.++.++.......-
T Consensus 195 ~~~~~---g~v~ald~~tG~~~W~~---~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~-~g~l~a~d~~tG~~~W 265 (377)
T TIGR03300 195 VGFAG---GKLVALDLQTGQPLWEQ---RVALPKGRTELERLVDVDGDPVV--DGGQVYAVSY-QGRVAALDLRSGRVLW 265 (377)
T ss_pred EECCC---CEEEEEEccCCCEeeee---ccccCCCCCchhhhhccCCccEE--ECCEEEEEEc-CCEEEEEECCCCcEEE
Confidence 66543 477777764 3322111 11111 01123 3688998875 4688888874322211
Q ss_pred EecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCcee
Q psy13635 301 LINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDR 340 (357)
Q Consensus 301 i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~ 340 (357)
-. ....+...++.++++|+.+ ..+.|+.++..+|+..
T Consensus 266 ~~--~~~~~~~p~~~~~~vyv~~-~~G~l~~~d~~tG~~~ 302 (377)
T TIGR03300 266 KR--DASSYQGPAVDDNRLYVTD-ADGVVVALDRRSGSEL 302 (377)
T ss_pred ee--ccCCccCceEeCCEEEEEC-CCCeEEEEECCCCcEE
Confidence 11 1233445567889999986 4578999998778754
No 119
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=95.63 E-value=2.1 Score=40.71 Aligned_cols=134 Identities=13% Similarity=0.091 Sum_probs=75.5
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-CC-
Q psy13635 187 ARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR-LG- 264 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~-l~- 264 (357)
++.+|++... +.+..+++..... +-...+..+..++++ +++||+++.. +++..++...... +.... +.
T Consensus 256 ~~~vy~~~~~-g~l~ald~~tG~~--~W~~~~~~~~~~~~~--~~~vy~~~~~---g~l~ald~~tG~~--~W~~~~~~~ 325 (394)
T PRK11138 256 GGVVYALAYN-GNLVALDLRSGQI--VWKREYGSVNDFAVD--GGRIYLVDQN---DRVYALDTRGGVE--LWSQSDLLH 325 (394)
T ss_pred CCEEEEEEcC-CeEEEEECCCCCE--EEeecCCCccCcEEE--CCEEEEEcCC---CeEEEEECCCCcE--EEcccccCC
Confidence 5789987753 5788887753321 111122334445555 6899999865 5888888864432 22111 10
Q ss_pred -CceEEEEecCCCEEEEEeCCCCeEEEEeC-CCCCeEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeC
Q psy13635 265 -WPNGITLDVDNEKLYWCDAKTDKIEMIDF-DGNNRRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 265 -~P~giaid~~~~~lY~~d~~~~~I~~~~~-dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~ 334 (357)
...+.++ .+++||+.+. .+.++.++. +|...-..-.....-...-.+.+++||+.+. .|.|+.++.
T Consensus 326 ~~~~sp~v--~~g~l~v~~~-~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t~-~G~l~~~~~ 393 (394)
T PRK11138 326 RLLTAPVL--YNGYLVVGDS-EGYLHWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQAR-DGTVYAITR 393 (394)
T ss_pred CcccCCEE--ECCEEEEEeC-CCEEEEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEeC-CceEEEEeC
Confidence 1112233 3789999875 568888887 4433222111111112233456889999964 478888764
No 120
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.62 E-value=1.2 Score=37.92 Aligned_cols=66 Identities=17% Similarity=0.181 Sum_probs=46.6
Q ss_pred eCCCCeEEEEeCCCCeEEEEEcCCCceEEEec------------CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 184 DWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN------------TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 184 D~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~------------~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
.|..|.||.--+.+.+|.+++++.......+. ...+-++|||.+|..+++|+|-..= +.++-+.++
T Consensus 182 E~VdG~lyANVw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK~w--p~lfEVk~~ 259 (262)
T COG3823 182 EWVDGELYANVWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGKLW--PLLFEVKLD 259 (262)
T ss_pred eeeccEEEEeeeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecCcC--ceeEEEEec
Confidence 45678999777888899999998554433222 1234789999999999999996552 355555443
No 121
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=95.60 E-value=2.3 Score=40.94 Aligned_cols=180 Identities=14% Similarity=0.084 Sum_probs=91.5
Q ss_pred cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC---CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT---EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 127 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~---~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~ 127 (357)
+++..|-++. ....+.........-.+.+...++.+..... .+|+..+++.+. ...+.+-...-...++.+.
T Consensus 174 ~l~~~D~dg~-~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~----~~~i~~~~g~~~~P~fspD 248 (425)
T COG0823 174 ELALGDYDGY-NQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGK----RPVILNFNGNNGAPAFSPD 248 (425)
T ss_pred eEEEEccCCc-ceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCc----cceeeccCCccCCccCCCC
Confidence 4555565542 2222222222223334445555554443322 247777777664 3333332223344567777
Q ss_pred CCeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC--eEEEE
Q psy13635 128 TEKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD--RIEVC 203 (357)
Q Consensus 128 ~~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~--~I~~~ 203 (357)
+++|.++-. ++-.|+.++++++....+.. ..++. . .=.+-|.+.+|+++....+ .|+++
T Consensus 249 G~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~-----~~gi~----------~--~Ps~spdG~~ivf~Sdr~G~p~I~~~ 311 (425)
T COG0823 249 GSKLAFSSSRDGSPDIYLMDLDGKNLPRLTN-----GFGIN----------T--SPSWSPDGSKIVFTSDRGGRPQIYLY 311 (425)
T ss_pred CCEEEEEECCCCCccEEEEcCCCCcceeccc-----CCccc----------c--CccCCCCCCEEEEEeCCCCCcceEEE
Confidence 788877654 34578889998887554321 11111 1 1123345667766543333 89999
Q ss_pred EcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 204 RLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 204 ~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
+++|+..+.+.... .....-.++|...+|-+.........|...++...
T Consensus 312 ~~~g~~~~riT~~~-~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~ 360 (425)
T COG0823 312 DLEGSQVTRLTFSG-GGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASG 360 (425)
T ss_pred CCCCCceeEeeccC-CCCcCccCCCCCCEEEEEeccCCceeeEEeccCCC
Confidence 99998876555432 22223345666555555553211123555555433
No 122
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=95.53 E-value=0.039 Score=40.21 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=34.0
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
...+..++..|.||++++.++.||+++...+.|.+...
T Consensus 46 ~~~va~g~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~ 83 (86)
T PF01731_consen 46 VKVVASGFSFANGIAISPDKKYLYVASSLAHSIHVYKR 83 (86)
T ss_pred eEEeeccCCCCceEEEcCCCCEEEEEeccCCeEEEEEe
Confidence 55778889999999999999999999999999988764
No 123
>KOG0268|consensus
Probab=95.46 E-value=1.1 Score=41.11 Aligned_cols=269 Identities=13% Similarity=0.125 Sum_probs=150.3
Q ss_pred EEeecCCCCeEEEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 33 YALSHHVAAQMLLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
+|++-++.....+++. +.+++..|++.-..........+...||.++. +..+++.| +..|.+..++|-. ..+
T Consensus 70 ~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~~~~tvgd--DKtvK~wk~~~~p---~~t 143 (433)
T KOG0268|consen 70 SCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-TSFFTVGD--DKTVKQWKIDGPP---LHT 143 (433)
T ss_pred chhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc-cceEEecC--CcceeeeeccCCc---cee
Confidence 3455554444444443 45677888865333444445666788888875 55555544 3456666666642 133
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
++... .-.||.-.+ .+.+|.|... .|...+..-.....-..- +......+.+.|..-.|
T Consensus 144 ilg~s--~~~gIdh~~-~~~~FaTcGe--~i~IWD~~R~~Pv~smsw----------------G~Dti~svkfNpvETsI 202 (433)
T KOG0268|consen 144 ILGKS--VYLGIDHHR-KNSVFATCGE--QIDIWDEQRDNPVSSMSW----------------GADSISSVKFNPVETSI 202 (433)
T ss_pred eeccc--ccccccccc-ccccccccCc--eeeecccccCCccceeec----------------CCCceeEEecCCCcchh
Confidence 33221 223444443 4455655533 333333322222111111 11122445556666677
Q ss_pred EEEeCCCCeEEEEEcCC-CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEE-eeCCCCCceE
Q psy13635 191 YWTDTGTDRIEVCRLEG-THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLL-VKDRLGWPNG 268 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g-~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~-~~~~l~~P~g 268 (357)
..+....+.|..+|+.- +..+.++. ...+++|+.+| ++..|++-... ..++..++.--....- .....+....
T Consensus 203 Las~~sDrsIvLyD~R~~~Pl~KVi~--~mRTN~IswnP-eafnF~~a~ED--~nlY~~DmR~l~~p~~v~~dhvsAV~d 277 (433)
T KOG0268|consen 203 LASCASDRSIVLYDLRQASPLKKVIL--TMRTNTICWNP-EAFNFVAANED--HNLYTYDMRNLSRPLNVHKDHVSAVMD 277 (433)
T ss_pred eeeeccCCceEEEecccCCccceeee--eccccceecCc-cccceeecccc--ccceehhhhhhcccchhhcccceeEEE
Confidence 77776677888888763 33333332 25789999999 79999887764 4888777654322211 1122334455
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec-CCCCceEEEEEECCEEEEEe-CC--CCeEEEEeC
Q psy13635 269 ITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN-ENLPHVFGISLLGDYVYWTD-WQ--RRSIDRVNK 334 (357)
Q Consensus 269 iaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~-~~~~~p~gia~~~~~ly~td-~~--~~~I~~~~~ 334 (357)
+.+. ..|.=|++-+....|..+..+....+.+.. ..+++.+++.+.-+.=|+-. +. +=++++.+.
T Consensus 278 Vdfs-ptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 278 VDFS-PTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred eccC-CCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 6665 466778888888899999887655555554 46788999988754444432 32 233455543
No 124
>PLN00181 protein SPA1-RELATED; Provisional
Probab=95.33 E-value=4.5 Score=42.49 Aligned_cols=178 Identities=9% Similarity=-0.010 Sum_probs=101.9
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 128 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~ 128 (357)
...|+..|+.................++++++.++.++++-..++.|...++.... ....+.. -..+..+++.+..
T Consensus 554 Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~---~~~~~~~-~~~v~~v~~~~~~ 629 (793)
T PLN00181 554 EGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV---SIGTIKT-KANICCVQFPSES 629 (793)
T ss_pred CCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc---EEEEEec-CCCeEEEEEeCCC
Confidence 45677888876433333444556688999998778888888888889988887653 1222222 2345667775556
Q ss_pred CeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCC-
Q psy13635 129 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEG- 207 (357)
Q Consensus 129 ~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g- 207 (357)
+..+.+-..++.|...++...........+. -.....+.+. .+..+++-...+.|...++..
T Consensus 630 g~~latgs~dg~I~iwD~~~~~~~~~~~~~h---------------~~~V~~v~f~--~~~~lvs~s~D~~ikiWd~~~~ 692 (793)
T PLN00181 630 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGH---------------SKTVSYVRFV--DSSTLVSSSTDNTLKLWDLSMS 692 (793)
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceEecCC---------------CCCEEEEEEe--CCCEEEEEECCCEEEEEeCCCC
Confidence 7777787788899999886432111110110 0122344443 344555655666777776642
Q ss_pred ------CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 208 ------THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 208 ------~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
.....+ .........+++++.++.|...... +.|...+..
T Consensus 693 ~~~~~~~~l~~~-~gh~~~i~~v~~s~~~~~lasgs~D---~~v~iw~~~ 738 (793)
T PLN00181 693 ISGINETPLHSF-MGHTNVKNFVGLSVSDGYIATGSET---NEVFVYHKA 738 (793)
T ss_pred ccccCCcceEEE-cCCCCCeeEEEEcCCCCEEEEEeCC---CEEEEEECC
Confidence 112222 1223345678888765544444333 456555543
No 125
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.27 E-value=2.4 Score=39.12 Aligned_cols=184 Identities=16% Similarity=0.125 Sum_probs=97.0
Q ss_pred eecCCCCeEEEEEe----------CCc-EEEEEcCCC-CcceEeccC------CCcEEEEEEEccCCEEEEEeCC-CCeE
Q psy13635 35 LSHHVAAQMLLFAT----------SKD-IRIANLSRP-LKPVTIIKD------LEEGAAIDYYYKKSMVCWTDHG-TEMI 95 (357)
Q Consensus 35 ~~~~~~~~~l~~~~----------~~~-i~~~~~~~~-~~~~~~~~~------~~~~~~i~~d~~~~~ly~~d~~-~~~I 95 (357)
+..++....+|.++ +.+ |..+|..+= ...++.++. +..+..+.+..++..+|+-+.. ...|
T Consensus 41 ~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SV 120 (342)
T PF06433_consen 41 VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSV 120 (342)
T ss_dssp EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEE
T ss_pred eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeE
Confidence 34455666677655 222 556777551 122223332 2234456677788999999875 4678
Q ss_pred EEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC--CCceEEEEecCCCCcceeeeeccCcc
Q psy13635 96 SCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD--GKKRKVLYWEDIDQPRAIASYKLPTI 173 (357)
Q Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~--g~~~~~~~~~~~~~p~~i~~~~~~~~ 173 (357)
..+++...... .++-..++ .+.+-+..+. |.+=.+.|++..+.+| |+..+. ...-+. +.. .-
T Consensus 121 tVVDl~~~kvv--~ei~~PGC----~~iyP~~~~~-F~~lC~DGsl~~v~Ld~~Gk~~~~-~t~~F~-~~~-------dp 184 (342)
T PF06433_consen 121 TVVDLAAKKVV--GEIDTPGC----WLIYPSGNRG-FSMLCGDGSLLTVTLDADGKEAQK-STKVFD-PDD-------DP 184 (342)
T ss_dssp EEEETTTTEEE--EEEEGTSE----EEEEEEETTE-EEEEETTSCEEEEEETSTSSEEEE-EEEESS-TTT-------S-
T ss_pred EEEECCCCcee--eeecCCCE----EEEEecCCCc-eEEEecCCceEEEEECCCCCEeEe-eccccC-CCC-------cc
Confidence 99999887421 23333333 1223222333 5566677888888776 443311 111110 000 00
Q ss_pred cccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC---------CCCCce---EEEEeCCCCEEEEEeC
Q psy13635 174 EVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT---------DLVEPR---AITLSPAHGYLFWSDW 238 (357)
Q Consensus 174 ~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~---------~~~~P~---giavd~~~g~Ly~~d~ 238 (357)
-|..| +.+..++.+||... .+.|+.+++.|...+....- .--.|. -+|+++..++||+...
T Consensus 185 ~f~~~---~~~~~~~~~~F~Sy-~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh 257 (342)
T PF06433_consen 185 LFEHP---AYSRDGGRLYFVSY-EGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMH 257 (342)
T ss_dssp B-S-----EEETTTTEEEEEBT-TSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEE
T ss_pred ccccc---ceECCCCeEEEEec-CCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEec
Confidence 11222 23335678888655 47899999998765443221 112343 3889998999998753
No 126
>PRK13616 lipoprotein LpqB; Provisional
Probab=95.09 E-value=4.3 Score=40.94 Aligned_cols=220 Identities=8% Similarity=-0.034 Sum_probs=108.8
Q ss_pred EEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC-------CCCeEEEEEcCCCCcceeEEEEeCC
Q psy13635 43 MLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH-------GTEMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 43 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~-------~~~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
.++......+.+++-.+.....-.......+...++.++++++.+... ....|+..+..|.. ..+. .+
T Consensus 322 ~~~~v~~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~----~~lt-~g 396 (591)
T PRK13616 322 GLHALVDGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA----VQVL-EG 396 (591)
T ss_pred cceEEECCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc----eeee-cC
Confidence 344444666777653221000001112345667788888888766542 23478877765542 2222 22
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEE-cCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSS-LDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~-~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
- .-....+++.++.|++....+ ++.++. -++.....+..-....++. . .-..+..+++.+.+.+|.+.-
T Consensus 397 ~-~~t~PsWspDG~~lw~v~dg~-~~~~v~~~~~~gql~~~~vd~ge~~~-~-------~~g~Issl~wSpDG~RiA~i~ 466 (591)
T PRK13616 397 H-SLTRPSWSLDADAVWVVVDGN-TVVRVIRDPATGQLARTPVDASAVAS-R-------VPGPISELQLSRDGVRAAMII 466 (591)
T ss_pred C-CCCCceECCCCCceEEEecCc-ceEEEeccCCCceEEEEeccCchhhh-c-------cCCCcCeEEECCCCCEEEEEE
Confidence 1 133445776667676664221 222222 1121111111111111110 0 002466777777777777655
Q ss_pred CCCCeEEE---EEcCCCceEE-----EecCCCCC-ceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCC
Q psy13635 195 TGTDRIEV---CRLEGTHRKV-----LVNTDLVE-PRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGW 265 (357)
Q Consensus 195 ~~~~~I~~---~~~~g~~~~~-----~~~~~~~~-P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~ 265 (357)
. ++|++ ...++...+. +. ..+.. +..++--. ++.|++...+.. ..++++.+||.....+....+..
T Consensus 467 ~--g~v~Va~Vvr~~~G~~~l~~~~~l~-~~l~~~~~~l~W~~-~~~L~V~~~~~~-~~v~~v~vDG~~~~~~~~~n~~~ 541 (591)
T PRK13616 467 G--GKVYLAVVEQTEDGQYALTNPREVG-PGLGDTAVSLDWRT-GDSLVVGRSDPE-HPVWYVNLDGSNSDALPSRNLSA 541 (591)
T ss_pred C--CEEEEEEEEeCCCCceeecccEEee-cccCCccccceEec-CCEEEEEecCCC-CceEEEecCCccccccCCCCccC
Confidence 3 45655 3333332222 22 23333 46666554 467887765543 67999999998776533333333
Q ss_pred c-eEEEEecCCCEEEEEeCC
Q psy13635 266 P-NGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 266 P-~giaid~~~~~lY~~d~~ 284 (357)
| ..|+- ..+.||++|..
T Consensus 542 ~v~~vaa--~~~~iyv~~~~ 559 (591)
T PRK13616 542 PVVAVAA--SPSTVYVTDAR 559 (591)
T ss_pred ceEEEec--CCceEEEEcCC
Confidence 3 34444 45689999854
No 127
>KOG0273|consensus
Probab=94.91 E-value=3.6 Score=39.18 Aligned_cols=157 Identities=16% Similarity=0.175 Sum_probs=99.1
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEe-CCCCEEEEEEcC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTD-SETNKLEVSSLD 147 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td-~~~~~I~~~~~~ 147 (357)
.-....++++.. +|.+..+...++.++-.+.+|.- ...+... ..|. +++-|...-=|+.. ...+++...+.-
T Consensus 234 ~nkdVT~L~Wn~-~G~~LatG~~~G~~riw~~~G~l----~~tl~~H-kgPI-~slKWnk~G~yilS~~vD~ttilwd~~ 306 (524)
T KOG0273|consen 234 SNKDVTSLDWNN-DGTLLATGSEDGEARIWNKDGNL----ISTLGQH-KGPI-FSLKWNKKGTYILSGGVDGTTILWDAH 306 (524)
T ss_pred ccCCcceEEecC-CCCeEEEeecCcEEEEEecCchh----hhhhhcc-CCce-EEEEEcCCCCEEEeccCCccEEEEecc
Confidence 345678899875 67777888888888888988874 2222221 2222 35555554444433 345666666653
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEe
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLS 227 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd 227 (357)
.......+ .+....++-|||.++.=|.+....+.|+++..++.....-..+.-...++|-.+
T Consensus 307 ~g~~~q~f------------------~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n 368 (524)
T KOG0273|consen 307 TGTVKQQF------------------EFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWN 368 (524)
T ss_pred CceEEEee------------------eeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEEC
Confidence 33333222 122334688999999999998888899999998876554444455678899999
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
|. |.|.-+......-+|+...-+
T Consensus 369 ~t-g~LLaS~SdD~TlkiWs~~~~ 391 (524)
T KOG0273|consen 369 PT-GSLLASCSDDGTLKIWSMGQS 391 (524)
T ss_pred CC-CceEEEecCCCeeEeeecCCC
Confidence 86 666666554332466655443
No 128
>KOG4378|consensus
Probab=94.85 E-value=3.9 Score=39.29 Aligned_cols=225 Identities=11% Similarity=0.071 Sum_probs=119.2
Q ss_pred EEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCE-EEEEEcCCCceEEEEecCCCCcc
Q psy13635 85 VCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNK-LEVSSLDGKKRKVLYWEDIDQPR 163 (357)
Q Consensus 85 ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~-I~~~~~~g~~~~~~~~~~~~~p~ 163 (357)
|.++.....++.++.-.-+..++...+-..+..+-..++.. ...+|.+..+.+. |...++..+.......
T Consensus 48 lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~--s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lk------- 118 (673)
T KOG4378|consen 48 LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACA--SQSLYEISGGQSGCVKIWDLRAKLIHRFLK------- 118 (673)
T ss_pred EEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhh--hcceeeeccCcCceeeehhhHHHHHhhhcc-------
Confidence 66666666676666544322222222222222244444443 6668888876544 4444555332222110
Q ss_pred eeeeeccCcccccCCceEEEeCCCCeEEEEeC-CCCeEEEEEcCCCceE-EEecCCCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 164 AIASYKLPTIEVEHPDGVAVDWVARNLYWTDT-GTDRIEVCRLEGTHRK-VLVNTDLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 164 ~i~~~~~~~~~~~~p~glavD~~~~~lY~td~-~~~~I~~~~~~g~~~~-~~~~~~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
.-.....++...+.. -|++.. ..+.|...+....... .+........+-+..++....|..+-..
T Consensus 119 ---------dh~stvt~v~YN~~D--eyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd-- 185 (673)
T KOG4378|consen 119 ---------DHQSTVTYVDYNNTD--EYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASD-- 185 (673)
T ss_pred ---------CCcceeEEEEecCCc--ceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeecc--
Confidence 001233344443322 233322 2234444443322221 2211112223455666666666666555
Q ss_pred CCeEEEEecCCCceEEEeeCCCCCc-eEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe-EEEecCCCCceE-EEEEE-CC
Q psy13635 242 RPKIERSLLNGGERVLLVKDRLGWP-NGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR-RELINENLPHVF-GISLL-GD 317 (357)
Q Consensus 242 ~~~I~~~~~dg~~~~~~~~~~l~~P-~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~-~~i~~~~~~~p~-gia~~-~~ 317 (357)
++.+...+..|.....-+.+.-..| .||.+.+.+..|+++-....+|..+|...... ..+. -.+|. .+++. .|
T Consensus 186 ~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~---y~~Plstvaf~~~G 262 (673)
T KOG4378|consen 186 KGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT---YSHPLSTVAFSECG 262 (673)
T ss_pred CCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee---ecCCcceeeecCCc
Confidence 3577777777765544333333345 79999999999999998889999998764322 2222 34665 46665 47
Q ss_pred EEEEEeCCCCeEEEEeC
Q psy13635 318 YVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 318 ~ly~td~~~~~I~~~~~ 334 (357)
....+-..+|+|+..|.
T Consensus 263 ~~L~aG~s~G~~i~YD~ 279 (673)
T KOG4378|consen 263 TYLCAGNSKGELIAYDM 279 (673)
T ss_pred eEEEeecCCceEEEEec
Confidence 77777777788888875
No 129
>KOG1446|consensus
Probab=94.84 E-value=2.9 Score=37.69 Aligned_cols=231 Identities=13% Similarity=0.107 Sum_probs=141.1
Q ss_pred CeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCE-EEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCC
Q psy13635 41 AQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSM-VCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT 118 (357)
Q Consensus 41 ~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~-ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 118 (357)
...|+.++ ++.++.+|...+.....+...--.+.-+-|-+.... |+=+...+..|+-.++.... ........-..
T Consensus 26 G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNk---ylRYF~GH~~~ 102 (311)
T KOG1446|consen 26 GLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNK---YLRYFPGHKKR 102 (311)
T ss_pred CCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCc---eEEEcCCCCce
Confidence 34455544 446888888765544444433223333344444444 44444456788888887763 34444444566
Q ss_pred ceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC
Q psy13635 119 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD 198 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~ 198 (357)
..+|++.|.+ ..|.+.+..++|+-.++.-...+.+.... .+.-.|+|| .|.+|.+-.+.+
T Consensus 103 V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~cqg~l~~~------------------~~pi~AfDp-~GLifA~~~~~~ 162 (311)
T KOG1446|consen 103 VNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKCQGLLNLS------------------GRPIAAFDP-EGLIFALANGSE 162 (311)
T ss_pred EEEEEecCCC-CeEEecccCCeEEeeEecCCCCceEEecC------------------CCcceeECC-CCcEEEEecCCC
Confidence 8899999865 78999998999999999866665554322 455568885 556776766666
Q ss_pred eEEEEEcC----CCceEEEec-CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe-cCCCceEEEee--CCCCCceEEE
Q psy13635 199 RIEVCRLE----GTHRKVLVN-TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL-LNGGERVLLVK--DRLGWPNGIT 270 (357)
Q Consensus 199 ~I~~~~~~----g~~~~~~~~-~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~-~dg~~~~~~~~--~~l~~P~gia 270 (357)
.|...|+. |-.....+. .....=.+|.+++.+..|.++... +.++.++ .+|.....+-. .....|-+-+
T Consensus 163 ~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~---s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ 239 (311)
T KOG1446|consen 163 LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA---SFIYLLDAFDGTVKSTFSGYPNAGNLPLSAT 239 (311)
T ss_pred eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCC---CcEEEEEccCCcEeeeEeeccCCCCcceeEE
Confidence 88877764 222222222 234456789999987778887766 4566665 45653333321 2334465666
Q ss_pred EecCCCEEEEEeCCCCeEEEEeCCCCCe
Q psy13635 271 LDVDNEKLYWCDAKTDKIEMIDFDGNNR 298 (357)
Q Consensus 271 id~~~~~lY~~d~~~~~I~~~~~dG~~~ 298 (357)
+.|++..+ .+-+..++|...+.+....
T Consensus 240 ftPds~Fv-l~gs~dg~i~vw~~~tg~~ 266 (311)
T KOG1446|consen 240 FTPDSKFV-LSGSDDGTIHVWNLETGKK 266 (311)
T ss_pred ECCCCcEE-EEecCCCcEEEEEcCCCcE
Confidence 66554444 4555678888888754443
No 130
>KOG0268|consensus
Probab=94.77 E-value=1.3 Score=40.65 Aligned_cols=231 Identities=12% Similarity=0.085 Sum_probs=132.4
Q ss_pred EEEEeecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 31 FWYALSHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
+..++.... ..++.++++.++++...++. ....+..-....||+-.. .+.+|-+-.. .|...+..-.. ...
T Consensus 111 ~V~Gi~v~~-~~~~tvgdDKtvK~wk~~~~--p~~tilg~s~~~gIdh~~-~~~~FaTcGe--~i~IWD~~R~~---Pv~ 181 (433)
T KOG0268|consen 111 LVRGICVTQ-TSFFTVGDDKTVKQWKIDGP--PLHTILGKSVYLGIDHHR-KNSVFATCGE--QIDIWDEQRDN---PVS 181 (433)
T ss_pred ceeeEEecc-cceEEecCCcceeeeeccCC--cceeeecccccccccccc-ccccccccCc--eeeecccccCC---ccc
Confidence 445555554 67788888888877665552 111222222344444433 3334433222 23322332221 133
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
...-+..+...+.+.+..-.|.-+....+.|..+++..... +-++ .+ ..+++|+..| ...
T Consensus 182 smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~~-----------------mRTN~IswnP-eaf 242 (433)
T KOG0268|consen 182 SMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-LT-----------------MRTNTICWNP-EAF 242 (433)
T ss_pred eeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee-ee-----------------ccccceecCc-ccc
Confidence 34445556677888888888888777788888888754432 2221 11 2688888888 778
Q ss_pred EEEEeCCCCeEEEEEcCCCceE-EEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEE-eeCCCCCce
Q psy13635 190 LYWTDTGTDRIEVCRLEGTHRK-VLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLL-VKDRLGWPN 267 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~~~-~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~-~~~~l~~P~ 267 (357)
.|++......++.+|+.--... .+..+......++.++|. |.=|++-.... .|.-...+.+..+.+ .....+...
T Consensus 243 nF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfspt-G~EfvsgsyDk--sIRIf~~~~~~SRdiYhtkRMq~V~ 319 (433)
T KOG0268|consen 243 NFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPT-GQEFVSGSYDK--SIRIFPVNHGHSRDIYHTKRMQHVF 319 (433)
T ss_pred ceeeccccccceehhhhhhcccchhhcccceeEEEeccCCC-cchhccccccc--eEEEeecCCCcchhhhhHhhhheee
Confidence 8888877778888876643322 122233455677888874 88888877754 676666665444333 334467777
Q ss_pred EEEEecCCCEEEE-EeCCCCeEEEEe
Q psy13635 268 GITLDVDNEKLYW-CDAKTDKIEMID 292 (357)
Q Consensus 268 giaid~~~~~lY~-~d~~~~~I~~~~ 292 (357)
++....++..++- +|.++=++|++.
T Consensus 320 ~Vk~S~Dskyi~SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 320 CVKYSMDSKYIISGSDDGNVRLWKAK 345 (433)
T ss_pred EEEEeccccEEEecCCCcceeeeecc
Confidence 8887655554432 233344555554
No 131
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.76 E-value=0.19 Score=30.78 Aligned_cols=41 Identities=17% Similarity=0.220 Sum_probs=30.1
Q ss_pred CCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEe
Q psy13635 186 VARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLS 227 (357)
Q Consensus 186 ~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd 227 (357)
.+++||+++...+.|..++........-+.. ...|.+++++
T Consensus 2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~~ 42 (42)
T TIGR02276 2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAVS 42 (42)
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEeC
Confidence 4678999999999999999865443333332 4789999875
No 132
>KOG0318|consensus
Probab=94.41 E-value=5.2 Score=38.73 Aligned_cols=200 Identities=12% Similarity=0.095 Sum_probs=111.4
Q ss_pred EEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 110 NVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 110 ~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
.++....++...+++.+.+..||-++ ..+.|...+........+...+ .-+...+++.+ ..+.
T Consensus 314 ~~i~GHnK~ITaLtv~~d~~~i~Sgs-yDG~I~~W~~~~g~~~~~~g~~---------------h~nqI~~~~~~-~~~~ 376 (603)
T KOG0318|consen 314 KVISGHNKSITALTVSPDGKTIYSGS-YDGHINSWDSGSGTSDRLAGKG---------------HTNQIKGMAAS-ESGE 376 (603)
T ss_pred heecccccceeEEEEcCCCCEEEeec-cCceEEEEecCCcccccccccc---------------ccceEEEEeec-CCCc
Confidence 34444556788999998776666444 5678888776554443332111 22356677776 4466
Q ss_pred EEEEeCCCCeEEEEEcCCCce--EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCce
Q psy13635 190 LYWTDTGTDRIEVCRLEGTHR--KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~~--~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
||-+.+ .+.+.+.++.+... ...+. --.+|.++++.+.++.+.++... .|....- .+....+ .-...|.
T Consensus 377 ~~t~g~-Dd~l~~~~~~~~~~t~~~~~~-lg~QP~~lav~~d~~~avv~~~~----~iv~l~~-~~~~~~~--~~~y~~s 447 (603)
T KOG0318|consen 377 LFTIGW-DDTLRVISLKDNGYTKSEVVK-LGSQPKGLAVLSDGGTAVVACIS----DIVLLQD-QTKVSSI--PIGYESS 447 (603)
T ss_pred EEEEec-CCeEEEEecccCcccccceee-cCCCceeEEEcCCCCEEEEEecC----cEEEEec-CCcceee--ccccccc
Confidence 765544 46788887654322 11121 23689999999876677777655 3332221 1111111 1235788
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEE--ecCCCCceEEEEEEC--CEEEEEeCCCCeEEEEeCccC
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRREL--INENLPHVFGISLLG--DYVYWTDWQRRSIDRVNKITG 337 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i--~~~~~~~p~gia~~~--~~ly~td~~~~~I~~~~~~~g 337 (357)
++|+.+....+- .-...++++.+.+.|....+. ..+....+..+++.. .+|-.+| .++++...+..+.
T Consensus 448 ~vAv~~~~~~va-VGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~D-a~rkvv~yd~~s~ 519 (603)
T KOG0318|consen 448 AVAVSPDGSEVA-VGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGD-ASRKVVLYDVASR 519 (603)
T ss_pred eEEEcCCCCEEE-EecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEec-cCCcEEEEEcccC
Confidence 999986544443 334556799999888653322 222334455666653 3333344 3355555554333
No 133
>KOG0310|consensus
Probab=94.11 E-value=5.6 Score=37.98 Aligned_cols=257 Identities=9% Similarity=0.047 Sum_probs=141.6
Q ss_pred EEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc-eeEE
Q psy13635 45 LFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP-DGLA 123 (357)
Q Consensus 45 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p-~gla 123 (357)
..+++-.+..++..+-........--....+++|-. +|+|.-+...+|.+..+++..... ...+. .-..| .-+-
T Consensus 43 aVt~S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~-DG~LlaaGD~sG~V~vfD~k~r~i---LR~~~-ah~apv~~~~ 117 (487)
T KOG0310|consen 43 AVTSSVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRS-DGRLLAAGDESGHVKVFDMKSRVI---LRQLY-AHQAPVHVTK 117 (487)
T ss_pred EEecccEEEEEecchhhhhhhHHhhccceeEEEeec-CCeEEEccCCcCcEEEeccccHHH---HHHHh-hccCceeEEE
Confidence 344444555565543111111111222466778864 788988888889999888554211 00111 11223 3344
Q ss_pred EEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEE
Q psy13635 124 IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVC 203 (357)
Q Consensus 124 vd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~ 203 (357)
+.+..+.++.+.++.+.+...++++... .+...+ --......++-+.++.|.++....+.|...
T Consensus 118 f~~~d~t~l~s~sDd~v~k~~d~s~a~v-~~~l~~---------------htDYVR~g~~~~~~~hivvtGsYDg~vrl~ 181 (487)
T KOG0310|consen 118 FSPQDNTMLVSGSDDKVVKYWDLSTAYV-QAELSG---------------HTDYVRCGDISPANDHIVVTGSYDGKVRLW 181 (487)
T ss_pred ecccCCeEEEecCCCceEEEEEcCCcEE-EEEecC---------------CcceeEeeccccCCCeEEEecCCCceEEEE
Confidence 6667788888888788888888888775 222121 112566778888999999999999999888
Q ss_pred EcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE-EeeCCCCCceEEEEecCCCEEEEEe
Q psy13635 204 RLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL-LVKDRLGWPNGITLDVDNEKLYWCD 282 (357)
Q Consensus 204 ~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~-~~~~~l~~P~giaid~~~~~lY~~d 282 (357)
+.......+. .-+-..|-.-.+--..|.+..+-.+ +.+...++-++.+.. .........++|.+...+.+|+- -
T Consensus 182 DtR~~~~~v~-elnhg~pVe~vl~lpsgs~iasAgG---n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS-~ 256 (487)
T KOG0310|consen 182 DTRSLTSRVV-ELNHGCPVESVLALPSGSLIASAGG---NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLS-G 256 (487)
T ss_pred EeccCCceeE-EecCCCceeeEEEcCCCCEEEEcCC---CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEee-c
Confidence 8765532222 1123445444444345777777766 367777776433322 22223445678887644455543 3
Q ss_pred CCCCeEEEEeCCCCCeEEEecCCCCce-EEEEEE-CCEEEEEeCCCCeE
Q psy13635 283 AKTDKIEMIDFDGNNRRELINENLPHV-FGISLL-GDYVYWTDWQRRSI 329 (357)
Q Consensus 283 ~~~~~I~~~~~dG~~~~~i~~~~~~~p-~gia~~-~~~ly~td~~~~~I 329 (357)
.-.+.+..++. ++-+.+..-..+.| ..|++. ++.-.+.-..+|.+
T Consensus 257 sLD~~VKVfd~--t~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv 303 (487)
T KOG0310|consen 257 SLDRHVKVFDT--TNYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLV 303 (487)
T ss_pred ccccceEEEEc--cceEEEEeeecccceeeEEecCCCceEEEeccccee
Confidence 34456666663 22222322234444 456665 33333333444444
No 134
>KOG4328|consensus
Probab=94.01 E-value=5.7 Score=37.74 Aligned_cols=252 Identities=11% Similarity=0.078 Sum_probs=130.6
Q ss_pred CCcEEEEEEEccCC-EEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc-CCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 70 LEEGAAIDYYYKKS-MVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-ITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 70 ~~~~~~i~~d~~~~-~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
-+....++|+|.++ ++.-+....|.|.-.++++.+.......+...- ....+|-+.|.+-.-.++.+..|.|...++.
T Consensus 186 ~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~ 265 (498)
T KOG4328|consen 186 DRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFE 265 (498)
T ss_pred ccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeec
Confidence 44678999999888 777776677888888886443111122222222 2345566666554444445556677777766
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEE--cCCCceEEEecCCCCCceEEE
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCR--LEGTHRKVLVNTDLVEPRAIT 225 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~--~~g~~~~~~~~~~~~~P~gia 225 (357)
+...+.+.+..-+ + .+-.++-+-...+.+|+.+.-. ....++ .+|+....+... -...++++
T Consensus 266 ~~i~e~v~s~~~d--~------------~~fs~~d~~~e~~~vl~~~~~G-~f~~iD~R~~~s~~~~~~lh-~kKI~sv~ 329 (498)
T KOG4328|consen 266 GNISEEVLSLDTD--N------------IWFSSLDFSAESRSVLFGDNVG-NFNVIDLRTDGSEYENLRLH-KKKITSVA 329 (498)
T ss_pred chhhHHHhhcCcc--c------------eeeeeccccCCCccEEEeeccc-ceEEEEeecCCccchhhhhh-hcccceee
Confidence 6655444433100 0 0122333333455666655443 333333 344433322221 23788999
Q ss_pred EeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC--CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC---C--CCe
Q psy13635 226 LSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD--RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD---G--NNR 298 (357)
Q Consensus 226 vd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~--~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d---G--~~~ 298 (357)
++|.....+.|..-....+||-..-=+.....++.. .-...++..+.|.++.|.-+ ...+.|..++-. . ...
T Consensus 330 ~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT-~~D~~IRv~dss~~sa~~~p~ 408 (498)
T KOG4328|consen 330 LNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTT-CQDNEIRVFDSSCISAKDEPL 408 (498)
T ss_pred cCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEee-ccCCceEEeecccccccCCcc
Confidence 999876666665443334677665433333222211 11223566777888885444 445677777642 1 123
Q ss_pred EEEecCCC--C--ceEEEEEE-CCEEEEEeCCCCeEEEEeCccCc
Q psy13635 299 RELINENL--P--HVFGISLL-GDYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 299 ~~i~~~~~--~--~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~ 338 (357)
..|.++.. . .|+--+++ ...+++.-...+.|-.++...|+
T Consensus 409 ~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q 453 (498)
T KOG4328|consen 409 GTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ 453 (498)
T ss_pred ceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCE
Confidence 33444321 1 23433444 23333343455677778774444
No 135
>KOG0281|consensus
Probab=93.97 E-value=5 Score=36.88 Aligned_cols=256 Identities=14% Similarity=0.082 Sum_probs=147.1
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 128 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~ 128 (357)
.+.|.+-|...-.-...+...-+...-++|+ +++.++...+..|...+.+.++ ...++.....+.-++.+.
T Consensus 216 DnTikiWD~n~~~c~~~L~GHtGSVLCLqyd---~rviisGSSDsTvrvWDv~tge---~l~tlihHceaVLhlrf~--- 286 (499)
T KOG0281|consen 216 DNTIKIWDKNSLECLKILTGHTGSVLCLQYD---ERVIVSGSSDSTVRVWDVNTGE---PLNTLIHHCEAVLHLRFS--- 286 (499)
T ss_pred cCceEEeccccHHHHHhhhcCCCcEEeeecc---ceEEEecCCCceEEEEeccCCc---hhhHHhhhcceeEEEEEe---
Confidence 4567777654422223334455667777776 6688898888888888888764 244444555666777775
Q ss_pred CeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCC-
Q psy13635 129 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEG- 207 (357)
Q Consensus 129 ~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g- 207 (357)
+...++.+-...|.+.+++... .++++....+-....+-+-+| .++.++.++..+|.+-+.+.
T Consensus 287 ng~mvtcSkDrsiaVWdm~sps-------------~it~rrVLvGHrAaVNvVdfd---~kyIVsASgDRTikvW~~st~ 350 (499)
T KOG0281|consen 287 NGYMVTCSKDRSIAVWDMASPT-------------DITLRRVLVGHRAAVNVVDFD---DKYIVSASGDRTIKVWSTSTC 350 (499)
T ss_pred CCEEEEecCCceeEEEeccCch-------------HHHHHHHHhhhhhheeeeccc---cceEEEecCCceEEEEeccce
Confidence 3455677777778777765432 111100001111223333333 35666777777888777664
Q ss_pred CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCe
Q psy13635 208 THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDK 287 (357)
Q Consensus 208 ~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~ 287 (357)
...+++. .+-+|||--..+|++.++-...+ .|.-.+...+.-..++...-.....|.+| + +-.++-...++
T Consensus 351 efvRtl~----gHkRGIAClQYr~rlvVSGSSDn--tIRlwdi~~G~cLRvLeGHEeLvRciRFd--~-krIVSGaYDGk 421 (499)
T KOG0281|consen 351 EFVRTLN----GHKRGIACLQYRDRLVVSGSSDN--TIRLWDIECGACLRVLEGHEELVRCIRFD--N-KRIVSGAYDGK 421 (499)
T ss_pred eeehhhh----cccccceehhccCeEEEecCCCc--eEEEEeccccHHHHHHhchHHhhhheeec--C-ceeeeccccce
Confidence 3333332 46789999888999999988854 77767665443322222211223456664 3 34467778888
Q ss_pred EEEEeCCC-CCeEEEe--------cCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCce
Q psy13635 288 IEMIDFDG-NNRRELI--------NENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 288 I~~~~~dG-~~~~~i~--------~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~ 339 (357)
|..-++.. ...+... .++.+..+++.+|+-.+ ++.+...+|..-+-.+|-.
T Consensus 422 ikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqI-vsssHddtILiWdFl~~~~ 481 (499)
T KOG0281|consen 422 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQI-ISSSHDDTILIWDFLNGPP 481 (499)
T ss_pred EEEEecccccCCcccccchHHHhhhhccceeEEEeecceEE-EeccCCCeEEEEEcCCCCc
Confidence 88888743 2222111 12344667887776444 4444555665544434433
No 136
>KOG0272|consensus
Probab=93.58 E-value=6.6 Score=36.97 Aligned_cols=252 Identities=10% Similarity=0.010 Sum_probs=142.5
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC-CCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL-TEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~-~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
.|.+...-..++.+..+..-+|.....+...-. ...++........++.+.|. ++.-..+.+..+.+.-.++++..
T Consensus 176 rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~---~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~ 252 (459)
T KOG0272|consen 176 RPISGCSFSRDSKHLATGSWSGLVKVWSVPQCN---LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET 252 (459)
T ss_pred CcceeeEeecCCCeEEEeecCCceeEeecCCcc---eeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence 344444444567777777766666655554432 13344445567888999987 35555666667777777766642
Q ss_pred e-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec-CCCCCceEEEEeC
Q psy13635 151 R-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN-TDLVEPRAITLSP 228 (357)
Q Consensus 151 ~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~-~~~~~P~giavd~ 228 (357)
. ..+. +-......+++.|.++.|- |-....+=..-|+..+. +.+.. +.-....+|++.+
T Consensus 253 ~l~~l~-----------------gH~~RVs~VafHPsG~~L~-TasfD~tWRlWD~~tk~-ElL~QEGHs~~v~~iaf~~ 313 (459)
T KOG0272|consen 253 PLQDLE-----------------GHLARVSRVAFHPSGKFLG-TASFDSTWRLWDLETKS-ELLLQEGHSKGVFSIAFQP 313 (459)
T ss_pred chhhhh-----------------cchhhheeeeecCCCceee-ecccccchhhcccccch-hhHhhcccccccceeEecC
Confidence 2 1111 1112455677777665554 33322211112222221 12222 2345678899997
Q ss_pred CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCc
Q psy13635 229 AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPH 308 (357)
Q Consensus 229 ~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~ 308 (357)
+ |.|--+-.-...++|+-... ....-++...+....+++++ .+|+..-+-...+.+..-|+.+.....++.....-
T Consensus 314 D-GSL~~tGGlD~~~RvWDlRt--gr~im~L~gH~k~I~~V~fs-PNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nl 389 (459)
T KOG0272|consen 314 D-GSLAATGGLDSLGRVWDLRT--GRCIMFLAGHIKEILSVAFS-PNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNL 389 (459)
T ss_pred C-CceeeccCccchhheeeccc--CcEEEEecccccceeeEeEC-CCceEEeecCCCCcEEEeeecccccceecccccch
Confidence 5 77766644333356654442 22233344566777899998 58888888887888888888776554444433333
Q ss_pred eEEEEEE--CCEEEEEeCCCCeEEEEeCccCceeEEEecccCC
Q psy13635 309 VFGISLL--GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCT 349 (357)
Q Consensus 309 p~gia~~--~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~ 349 (357)
...+.+. +|...+|.+..+.+..-...+.+....++..-.+
T Consensus 390 VS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~k 432 (459)
T KOG0272|consen 390 VSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGK 432 (459)
T ss_pred hhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccc
Confidence 4455554 4777777777777665554455555555444333
No 137
>PLN00181 protein SPA1-RELATED; Provisional
Probab=93.42 E-value=12 Score=39.38 Aligned_cols=233 Identities=8% Similarity=-0.045 Sum_probs=125.8
Q ss_pred CCCCeEEEEEe-CCcEEEEEcCCC----C---cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeE
Q psy13635 38 HVAAQMLLFAT-SKDIRIANLSRP----L---KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKH 109 (357)
Q Consensus 38 ~~~~~~l~~~~-~~~i~~~~~~~~----~---~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 109 (357)
++...++..+. +..|+..++... . .............++++++..+....+...++.|...++.... ..
T Consensus 492 s~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~---~~ 568 (793)
T PLN00181 492 DRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQ---LV 568 (793)
T ss_pred CCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCe---EE
Confidence 33344444444 456777776431 0 1111222334566778876555555566667788888877552 12
Q ss_pred EEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 110 NVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 110 ~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
..+...-....++++++..+.++++-...+.|...++........+... .....+.+.+..+.
T Consensus 569 ~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-----------------~~v~~v~~~~~~g~ 631 (793)
T PLN00181 569 TEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-----------------ANICCVQFPSESGR 631 (793)
T ss_pred EEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-----------------CCeEEEEEeCCCCC
Confidence 2333333456788888767788888888899999998654332221110 12344555444566
Q ss_pred EEEEeCCCCeEEEEEcCCCc-eEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC------ceEEEeeCC
Q psy13635 190 LYWTDTGTDRIEVCRLEGTH-RKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG------ERVLLVKDR 262 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~-~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~------~~~~~~~~~ 262 (357)
++++....+.|...+..... ..............+.+. ....|+-+... +.|...++... .....+...
T Consensus 632 ~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D---~~ikiWd~~~~~~~~~~~~l~~~~gh 707 (793)
T PLN00181 632 SLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTD---NTLKLWDLSMSISGINETPLHSFMGH 707 (793)
T ss_pred EEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECC---CEEEEEeCCCCccccCCcceEEEcCC
Confidence 77777777888888876432 111222222345566665 33444444333 35555554311 111112122
Q ss_pred CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 263 LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 263 l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
......+++++.+ .+..+-...+.|...+...
T Consensus 708 ~~~i~~v~~s~~~-~~lasgs~D~~v~iw~~~~ 739 (793)
T PLN00181 708 TNVKNFVGLSVSD-GYIATGSETNEVFVYHKAF 739 (793)
T ss_pred CCCeeEEEEcCCC-CEEEEEeCCCEEEEEECCC
Confidence 2345678887554 4455555667777777643
No 138
>KOG1274|consensus
Probab=93.33 E-value=4.2 Score=41.90 Aligned_cols=158 Identities=9% Similarity=0.064 Sum_probs=91.8
Q ss_pred CCceEEEeCCCCeEEEEeCCCC-eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce
Q psy13635 177 HPDGVAVDWVARNLYWTDTGTD-RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER 255 (357)
Q Consensus 177 ~p~glavD~~~~~lY~td~~~~-~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~ 255 (357)
+-..|.+|+.+..|+.++.... ++....-+-...+.+.. ......+++... + .|.+.... +.|.+...+....
T Consensus 15 G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~-~g~~v~~ia~~s--~-~f~~~s~~--~tv~~y~fps~~~ 88 (933)
T KOG1274|consen 15 GLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDI-SGELVSSIACYS--N-HFLTGSEQ--NTVLRYKFPSGEE 88 (933)
T ss_pred ceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhc-cCceeEEEeecc--c-ceEEeecc--ceEEEeeCCCCCc
Confidence 3467888988888888777543 33333322233333321 123455666662 2 44444442 5899999887766
Q ss_pred EEEeeCCCCCc-eEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEe
Q psy13635 256 VLLVKDRLGWP-NGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 256 ~~~~~~~l~~P-~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~ 333 (357)
..++.. +..| +.++++ -+|....+-...-.|..++.+-......+...-....+|.++ ++.+..+...+|.|+..+
T Consensus 89 ~~iL~R-ftlp~r~~~v~-g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~ 166 (933)
T KOG1274|consen 89 DTILAR-FTLPIRDLAVS-GSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWD 166 (933)
T ss_pred cceeee-eeccceEEEEe-cCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEE
Confidence 655533 3344 678887 455554555555567777764443333333222334678887 466666667778888888
Q ss_pred CccCceeEE
Q psy13635 334 KITGNDREV 342 (357)
Q Consensus 334 ~~~g~~~~~ 342 (357)
..++.....
T Consensus 167 ~~~~~~~~t 175 (933)
T KOG1274|consen 167 LQDGILSKT 175 (933)
T ss_pred cccchhhhh
Confidence 766654443
No 139
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=93.24 E-value=0.38 Score=29.31 Aligned_cols=39 Identities=13% Similarity=0.044 Sum_probs=31.9
Q ss_pred ECCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 315 LGDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 315 ~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
++++||++++..++|..++..+++....+.- ...|.++.
T Consensus 2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~ 40 (42)
T TIGR02276 2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVA 40 (42)
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEE
Confidence 3578999999999999999878887777666 47787765
No 140
>KOG0293|consensus
Probab=93.23 E-value=7.5 Score=36.60 Aligned_cols=252 Identities=11% Similarity=0.067 Sum_probs=141.9
Q ss_pred EeccCCCcEEEEEEEccCCEEEEEeCCC---CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEE
Q psy13635 65 TIIKDLEEGAAIDYYYKKSMVCWTDHGT---EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKL 141 (357)
Q Consensus 65 ~~~~~~~~~~~i~~d~~~~~ly~~d~~~---~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I 141 (357)
.+...-...+-+.|++++. |.+.... ..|+.+..++.. +-...+.........|...|.++.|.-+. ....+
T Consensus 219 il~~htdEVWfl~FS~nGk--yLAsaSkD~Taiiw~v~~d~~~--kl~~tlvgh~~~V~yi~wSPDdryLlaCg-~~e~~ 293 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGK--YLASASKDSTAIIWIVVYDVHF--KLKKTLVGHSQPVSYIMWSPDDRYLLACG-FDEVL 293 (519)
T ss_pred hHhhCCCcEEEEEEcCCCe--eEeeccCCceEEEEEEecCcce--eeeeeeecccCceEEEEECCCCCeEEecC-chHhe
Confidence 3344555677777776443 3333322 245666666552 11223333334456678888777665443 34456
Q ss_pred EEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCc
Q psy13635 142 EVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEP 221 (357)
Q Consensus 142 ~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P 221 (357)
...+.+.+......+.+.+ ..+...+--|.+ .=+++......|...++||.....--.......
T Consensus 294 ~lwDv~tgd~~~~y~~~~~---------------~S~~sc~W~pDg-~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v 357 (519)
T KOG0293|consen 294 SLWDVDTGDLRHLYPSGLG---------------FSVSSCAWCPDG-FRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKV 357 (519)
T ss_pred eeccCCcchhhhhcccCcC---------------CCcceeEEccCC-ceeEecCCCCcEEEecCCcchhhccccccccee
Confidence 6667766665555544321 134444444333 336777777889999999986443322233456
Q ss_pred eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEE
Q psy13635 222 RAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRREL 301 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i 301 (357)
..+|+.+++..++..... .+|.-.+......+-++.+. ..-..+.+. .++++...+-..+.|+.-|+.- ++ +
T Consensus 358 ~dlait~Dgk~vl~v~~d---~~i~l~~~e~~~dr~lise~-~~its~~iS-~d~k~~LvnL~~qei~LWDl~e-~~--l 429 (519)
T KOG0293|consen 358 HDLAITYDGKYVLLVTVD---KKIRLYNREARVDRGLISEE-QPITSFSIS-KDGKLALVNLQDQEIHLWDLEE-NK--L 429 (519)
T ss_pred EEEEEcCCCcEEEEEecc---cceeeechhhhhhhcccccc-CceeEEEEc-CCCcEEEEEcccCeeEEeecch-hh--H
Confidence 789999888888888765 46766666544333233221 233678886 7888888888888898888762 21 1
Q ss_pred ecCCCCc-----eEEEEEEC-C-EEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 302 INENLPH-----VFGISLLG-D-YVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 302 ~~~~~~~-----p~gia~~~-~-~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
+..-.++ ...=++.+ + .+.-+-+..+.|+--++.+|+...++..
T Consensus 430 v~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsG 480 (519)
T KOG0293|consen 430 VRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSG 480 (519)
T ss_pred HHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecC
Confidence 1111111 11112222 2 3333445556677666667776666543
No 141
>KOG0318|consensus
Probab=93.22 E-value=8.7 Score=37.28 Aligned_cols=214 Identities=16% Similarity=0.081 Sum_probs=123.0
Q ss_pred cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE-eCCcCCceeEEEEcCCC
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-TNGLITPDGLAIDWLTE 129 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-~~~~~~p~glavd~~~~ 129 (357)
.|--++++.......+....+...++...+++..|| +...++.|...+..... .-.+. ...-....+++.+ ..+
T Consensus 301 ~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~-SgsyDG~I~~W~~~~g~---~~~~~g~~h~nqI~~~~~~-~~~ 375 (603)
T KOG0318|consen 301 TINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIY-SGSYDGHINSWDSGSGT---SDRLAGKGHTNQIKGMAAS-ESG 375 (603)
T ss_pred EEEEecccCCChhheecccccceeEEEEcCCCCEEE-eeccCceEEEEecCCcc---ccccccccccceEEEEeec-CCC
Confidence 344444443333444445667788999988765555 44556777777765443 11121 2233457788887 346
Q ss_pred eEEEEeCCCCEEEEEEcCCCce--EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCC
Q psy13635 130 KLYWTDSETNKLEVSSLDGKKR--KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEG 207 (357)
Q Consensus 130 ~ly~td~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g 207 (357)
.||-+.. .+++.++++.+... ...+.- -.+|.|+|+...++.+.++... .|.... +.
T Consensus 376 ~~~t~g~-Dd~l~~~~~~~~~~t~~~~~~l-----------------g~QP~~lav~~d~~~avv~~~~--~iv~l~-~~ 434 (603)
T KOG0318|consen 376 ELFTIGW-DDTLRVISLKDNGYTKSEVVKL-----------------GSQPKGLAVLSDGGTAVVACIS--DIVLLQ-DQ 434 (603)
T ss_pred cEEEEec-CCeEEEEecccCcccccceeec-----------------CCCceeEEEcCCCCEEEEEecC--cEEEEe-cC
Confidence 6665554 56888887744321 111111 1478899998666666666553 233332 11
Q ss_pred CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE--EeeCCCCCceEEEEecCCCEEEEEeCCC
Q psy13635 208 THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL--LVKDRLGWPNGITLDVDNEKLYWCDAKT 285 (357)
Q Consensus 208 ~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~--~~~~~l~~P~giaid~~~~~lY~~d~~~ 285 (357)
+....+ . -.-.|.++|++|.....-+--.. +++....+.|....+ ........+..+++.++...|-.+|. +
T Consensus 435 ~~~~~~-~-~~y~~s~vAv~~~~~~vaVGG~D---gkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da-~ 508 (603)
T KOG0318|consen 435 TKVSSI-P-IGYESSAVAVSPDGSEVAVGGQD---GKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDA-S 508 (603)
T ss_pred Ccceee-c-cccccceEEEcCCCCEEEEeccc---ceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEecc-C
Confidence 111111 1 23478899999875444443332 688888888865322 22344566789999877777777775 4
Q ss_pred CeEEEEeCCCC
Q psy13635 286 DKIEMIDFDGN 296 (357)
Q Consensus 286 ~~I~~~~~dG~ 296 (357)
+++...+....
T Consensus 509 rkvv~yd~~s~ 519 (603)
T KOG0318|consen 509 RKVVLYDVASR 519 (603)
T ss_pred CcEEEEEcccC
Confidence 56666665443
No 142
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=93.09 E-value=8.4 Score=36.80 Aligned_cols=237 Identities=16% Similarity=0.192 Sum_probs=122.4
Q ss_pred ecCCCCeEEEEEe------CCcEEEEEcCCCCcceEeccCCCcE--EEEEEEccCCEEEEEeCCC----------CeEEE
Q psy13635 36 SHHVAAQMLLFAT------SKDIRIANLSRPLKPVTIIKDLEEG--AAIDYYYKKSMVCWTDHGT----------EMISC 97 (357)
Q Consensus 36 ~~~~~~~~l~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~--~~i~~d~~~~~ly~~d~~~----------~~I~~ 97 (357)
..++...+++++- ...++.+|+.++. .+...+..+ .++.+...+..+|++.... ..|++
T Consensus 130 ~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~---~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~ 206 (414)
T PF02897_consen 130 SVSPDGKRLAYSLSDGGSEWYTLRVFDLETGK---FLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYR 206 (414)
T ss_dssp EETTTSSEEEEEEEETTSSEEEEEEEETTTTE---EEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEE
T ss_pred eECCCCCEEEEEecCCCCceEEEEEEECCCCc---CcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEE
Confidence 3445556666654 1247889997642 222222222 2378888778888886543 34777
Q ss_pred EEcCCCCcceeEEEEeCCcCCce---eEEEEcCCCeEEEEeC--CC-CEEEEEEcCCC-----ceEEEEecCCCCcceee
Q psy13635 98 CTFDGNNVGSKHNVITNGLITPD---GLAIDWLTEKLYWTDS--ET-NKLEVSSLDGK-----KRKVLYWEDIDQPRAIA 166 (357)
Q Consensus 98 ~~~~g~~~~~~~~~~~~~~~~p~---glavd~~~~~ly~td~--~~-~~I~~~~~~g~-----~~~~~~~~~~~~p~~i~ 166 (357)
..+.... ..-.++...-..+. ++.....++.|++... .+ ..++.++++.. ..+.+....
T Consensus 207 ~~~gt~~--~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~-------- 276 (414)
T PF02897_consen 207 HKLGTPQ--SEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPRE-------- 276 (414)
T ss_dssp EETTS-G--GG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESS--------
T ss_pred EECCCCh--HhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCC--------
Confidence 7776553 22234444434444 6777777777776543 23 46777777653 223332111
Q ss_pred eeccCcccccCCceEEEeCCCCeEEE-EeCC--CCeEEEEEcCCCc----eEEEecCCC-CCceEEEEeCCCCEEEEEeC
Q psy13635 167 SYKLPTIEVEHPDGVAVDWVARNLYW-TDTG--TDRIEVCRLEGTH----RKVLVNTDL-VEPRAITLSPAHGYLFWSDW 238 (357)
Q Consensus 167 ~~~~~~~~~~~p~glavD~~~~~lY~-td~~--~~~I~~~~~~g~~----~~~~~~~~~-~~P~giavd~~~g~Ly~~d~ 238 (357)
. -..-.++..++.+|+ |+.+ .++|.+++++... ...++...- ....++.+. .++|++...
T Consensus 277 ---------~-~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~Lvl~~~ 344 (414)
T PF02897_consen 277 ---------D-GVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLF--KDYLVLSYR 344 (414)
T ss_dssp ---------S-S-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEE--TTEEEEEEE
T ss_pred ---------C-ceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEE--CCEEEEEEE
Confidence 0 111234445777876 4433 3489999988654 224444321 245677666 577877766
Q ss_pred CCCCCeEEEEecC-CCceEEEeeCCCCCceEEEEecCCCEEEEEeCC---CCeEEEEeCCCCC
Q psy13635 239 NEKRPKIERSLLN-GGERVLLVKDRLGWPNGITLDVDNEKLYWCDAK---TDKIEMIDFDGNN 297 (357)
Q Consensus 239 ~~~~~~I~~~~~d-g~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~---~~~I~~~~~dG~~ 297 (357)
.....+|...+++ +.....+.........++.-+..++.+++.-.. -..++.+++....
T Consensus 345 ~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~ 407 (414)
T PF02897_consen 345 ENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGE 407 (414)
T ss_dssp ETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTC
T ss_pred ECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCC
Confidence 5434688888888 544444432222222344444445555443321 1345555554433
No 143
>KOG0281|consensus
Probab=92.83 E-value=5.8 Score=36.45 Aligned_cols=186 Identities=16% Similarity=0.128 Sum_probs=113.9
Q ss_pred EEEEEEEEeecCCCCeEEEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCC
Q psy13635 27 LVVHFWYALSHHVAAQMLLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNN 104 (357)
Q Consensus 27 ~~~~~~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 104 (357)
.+|||-|+-- ++++. ...|+.-|...++.....+..-....++.|. +.+.++-..+..|...+++...
T Consensus 239 SVLCLqyd~r-------viisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sps 308 (499)
T KOG0281|consen 239 SVLCLQYDER-------VIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASPT 308 (499)
T ss_pred cEEeeeccce-------EEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe---CCEEEEecCCceeEEEeccCch
Confidence 4666666543 33333 4568889988877777777777788888885 4566777777888888887654
Q ss_pred cceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc-eEEEEecCCCCcceeeeeccCcccccCCceEEE
Q psy13635 105 VGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK-RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAV 183 (357)
Q Consensus 105 ~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glav 183 (357)
.-....++.........+.+| + ++.++.++..+|.+.+.+... .+++. + +-.|||.
T Consensus 309 ~it~rrVLvGHrAaVNvVdfd--~-kyIVsASgDRTikvW~~st~efvRtl~----g----------------HkRGIAC 365 (499)
T KOG0281|consen 309 DITLRRVLVGHRAAVNVVDFD--D-KYIVSASGDRTIKVWSTSTCEFVRTLN----G----------------HKRGIAC 365 (499)
T ss_pred HHHHHHHHhhhhhheeeeccc--c-ceEEEecCCceEEEEeccceeeehhhh----c----------------cccccee
Confidence 101112333334445555555 3 366677788899988876543 33332 2 4456666
Q ss_pred eCCCCeEEEEeCCCCeEEEEEcC-CCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 184 DWVARNLYWTDTGTDRIEVCRLE-GTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 184 D~~~~~lY~td~~~~~I~~~~~~-g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
-.-++++.++.+..++|...+.. |.-.+++ .+.-+-.+-|-+| +.+| ++-.. .++|..-++.
T Consensus 366 lQYr~rlvVSGSSDntIRlwdi~~G~cLRvL-eGHEeLvRciRFd--~krI-VSGaY--DGkikvWdl~ 428 (499)
T KOG0281|consen 366 LQYRDRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRFD--NKRI-VSGAY--DGKIKVWDLQ 428 (499)
T ss_pred hhccCeEEEecCCCceEEEEeccccHHHHHH-hchHHhhhheeec--Ccee-eeccc--cceEEEEecc
Confidence 66788999999999999988876 4333333 2333445667777 2333 33222 2466655554
No 144
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=92.74 E-value=7.5 Score=36.41 Aligned_cols=91 Identities=13% Similarity=0.255 Sum_probs=59.1
Q ss_pred CCCeEEEEeCCCC--eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC--CCeEEEEecC-CCceEEEee
Q psy13635 186 VARNLYWTDTGTD--RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK--RPKIERSLLN-GGERVLLVK 260 (357)
Q Consensus 186 ~~~~lY~td~~~~--~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~--~~~I~~~~~d-g~~~~~~~~ 260 (357)
.++.++|.-...+ .|..++.+|...+.+..+...--.-+.+|+.++.||++-...+ ..++++++++ ++..+.+..
T Consensus 246 ~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~ 325 (353)
T PF00930_consen 246 DGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTC 325 (353)
T ss_dssp TSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESST
T ss_pred CCCEEEEEEEcCCCcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccC
Confidence 4444444433444 8999999998877666554433345888999999999987632 5799999999 777766643
Q ss_pred CCCCCceEEEEecCCCE
Q psy13635 261 DRLGWPNGITLDVDNEK 277 (357)
Q Consensus 261 ~~l~~P~giaid~~~~~ 277 (357)
..... ..+++.+....
T Consensus 326 ~~~~~-~~~~~Spdg~y 341 (353)
T PF00930_consen 326 EDGDH-YSASFSPDGKY 341 (353)
T ss_dssp TSSTT-EEEEE-TTSSE
T ss_pred CCCCc-eEEEECCCCCE
Confidence 32222 47777754433
No 145
>KOG0276|consensus
Probab=92.65 E-value=12 Score=37.28 Aligned_cols=184 Identities=12% Similarity=0.076 Sum_probs=107.4
Q ss_pred EEeecCCCCeEEEEEeC-CcEEEEEcCCCCcceEe-ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 33 YALSHHVAAQMLLFATS-KDIRIANLSRPLKPVTI-IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~-~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
-|+..+|.+|+++.+.- .++.+.+-++..-.... +.+. ...+-.|-...+++ ++...+..|+..+.+..+ ...
T Consensus 17 KsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~-PvRa~kfiaRknWi-v~GsDD~~IrVfnynt~e---kV~ 91 (794)
T KOG0276|consen 17 KSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEV-PVRAAKFIARKNWI-VTGSDDMQIRVFNYNTGE---KVK 91 (794)
T ss_pred eeeecCCCCceEEEeeecCeeEEEecccceeeeeeeeccc-chhhheeeeccceE-EEecCCceEEEEecccce---eeE
Confidence 35677889999988874 35666666542111111 1111 11222233333433 344556688888888774 334
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
.....-.....|+++| +.-...+.++.-.|...+-++...-.-.-++. -+....+++.|...+-
T Consensus 92 ~FeAH~DyIR~iavHP-t~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH---------------~HyVMqv~fnPkD~nt 155 (794)
T KOG0276|consen 92 TFEAHSDYIRSIAVHP-TLPYVLTSSDDMTIKLWDWENEWACEQTFEGH---------------EHYVMQVAFNPKDPNT 155 (794)
T ss_pred EeeccccceeeeeecC-CCCeEEecCCccEEEEeeccCceeeeeEEcCc---------------ceEEEEEEecCCCccc
Confidence 4444445689999997 66666788888889888888775432222221 1356678999999888
Q ss_pred EEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEe
Q psy13635 191 YWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSD 237 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d 237 (357)
|.+..-..+|-+-++......-...+.....+.+..-+...+-|...
T Consensus 156 FaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIs 202 (794)
T KOG0276|consen 156 FASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLIS 202 (794)
T ss_pred eeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEe
Confidence 88877777776666554443333333334455555554444444443
No 146
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=92.60 E-value=7 Score=34.56 Aligned_cols=105 Identities=14% Similarity=0.182 Sum_probs=60.5
Q ss_pred EeCCCCEEEEEEcCCCce--EEEEecCCCCcceeeeeccCcccccCCceEEE--eCCCCeEEEEe-CCCCeEEEEEcC--
Q psy13635 134 TDSETNKLEVSSLDGKKR--KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAV--DWVARNLYWTD-TGTDRIEVCRLE-- 206 (357)
Q Consensus 134 td~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~i~~~~~~~~~~~~p~glav--D~~~~~lY~td-~~~~~I~~~~~~-- 206 (357)
+|..+++|..+.+|+..+ +.+.... .|- .+....|.|+++ ++.++-.|+-- ...+.|.++.+-
T Consensus 119 SdR~~~~i~~y~Idp~~~~L~sitD~n--~p~--------ss~~s~~YGl~lyrs~ktgd~yvfV~~~qG~~~Qy~l~d~ 188 (364)
T COG4247 119 SDRQNDKIVFYKIDPNPQYLESITDSN--APY--------SSSSSSAYGLALYRSPKTGDYYVFVNRRQGDIAQYKLIDQ 188 (364)
T ss_pred ccccCCeEEEEEeCCCccceeeccCCC--Ccc--------ccCcccceeeEEEecCCcCcEEEEEecCCCceeEEEEEec
Confidence 455567777777666543 3332111 111 334567888888 55556555432 223566665542
Q ss_pred --CCceEEEecC--CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 207 --GTHRKVLVNT--DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 207 --g~~~~~~~~~--~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
|.....++.+ --.+..|+..|-..|.||+++.. -.||+...+
T Consensus 189 gnGkv~~k~vR~fk~~tQTEG~VaDdEtG~LYIaeEd---vaiWK~~Ae 234 (364)
T COG4247 189 GNGKVGTKLVRQFKIPTQTEGMVADDETGFLYIAEED---VAIWKYEAE 234 (364)
T ss_pred CCceEcceeeEeeecCCcccceeeccccceEEEeecc---ceeeecccC
Confidence 3222222221 11356789999899999999987 478888764
No 147
>KOG0266|consensus
Probab=92.54 E-value=11 Score=36.73 Aligned_cols=229 Identities=13% Similarity=0.077 Sum_probs=129.2
Q ss_pred CCeEEEEEe-CCcEEEEEcCCCC--cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEc-CCCCcceeEEEEeCC
Q psy13635 40 AAQMLLFAT-SKDIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTF-DGNNVGSKHNVITNG 115 (357)
Q Consensus 40 ~~~~l~~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~~~~~~~~~ 115 (357)
...++..+. ...++..+..+.. ....+.........++|.+. +....+-..+..|+..++ +... ...++...
T Consensus 170 ~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d-~~~l~s~s~D~tiriwd~~~~~~---~~~~l~gH 245 (456)
T KOG0266|consen 170 DGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPD-GSYLLSGSDDKTLRIWDLKDDGR---NLKTLKGH 245 (456)
T ss_pred CCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCC-CcEEEEecCCceEEEeeccCCCe---EEEEecCC
Confidence 334444443 4445555553322 12222344556788899874 445666666777777777 3321 24455555
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
.....++++++.+ ++..+-+..+.|...+..+......+..- -....++++.+ .++++++..
T Consensus 246 ~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~l~~h----------------s~~is~~~f~~-d~~~l~s~s 307 (456)
T KOG0266|consen 246 STYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRKLKGH----------------SDGISGLAFSP-DGNLLVSAS 307 (456)
T ss_pred CCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEeeecc----------------CCceEEEEECC-CCCEEEEcC
Confidence 5667999999877 88888888999999998864433332211 12456788885 455666666
Q ss_pred CCCeEEEEEcCCCceE--EEecCCCCCc---eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC-ceEEEeeCCCC--Cce
Q psy13635 196 GTDRIEVCRLEGTHRK--VLVNTDLVEP---RAITLSPAHGYLFWSDWNEKRPKIERSLLNGG-ERVLLVKDRLG--WPN 267 (357)
Q Consensus 196 ~~~~I~~~~~~g~~~~--~~~~~~~~~P---~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~-~~~~~~~~~l~--~P~ 267 (357)
..+.|...|..+.... .... ....| ..+.++|...+|+..-.. +.+.-.++... ........... ...
T Consensus 308 ~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~fsp~~~~ll~~~~d---~~~~~w~l~~~~~~~~~~~~~~~~~~~~ 383 (456)
T KOG0266|consen 308 YDGTIRVWDLETGSKLCLKLLS-GAENSAPVTSVQFSPNGKYLLSASLD---RTLKLWDLRSGKSVGTYTGHSNLVRCIF 383 (456)
T ss_pred CCccEEEEECCCCceeeeeccc-CCCCCCceeEEEECCCCcEEEEecCC---CeEEEEEccCCcceeeecccCCcceeEe
Confidence 6789999998876632 2222 23444 778888765555554443 35555555422 22222111111 111
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
.... ..++....+-...+.|...++..
T Consensus 384 ~~~~-~~~~~~i~sg~~d~~v~~~~~~s 410 (456)
T KOG0266|consen 384 SPTL-STGGKLIYSGSEDGSVYVWDSSS 410 (456)
T ss_pred cccc-cCCCCeEEEEeCCceEEEEeCCc
Confidence 1121 23555555555667777777764
No 148
>KOG0279|consensus
Probab=92.49 E-value=7.5 Score=34.69 Aligned_cols=200 Identities=12% Similarity=0.078 Sum_probs=128.6
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR 151 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~ 151 (357)
....++..+ ++...++-..++.++..++.++. ....+...-.-..++|+++.++.| ++-+..++|...+.-|.-.
T Consensus 65 ~v~dv~~s~-dg~~alS~swD~~lrlWDl~~g~---~t~~f~GH~~dVlsva~s~dn~qi-vSGSrDkTiklwnt~g~ck 139 (315)
T KOG0279|consen 65 FVSDVVLSS-DGNFALSASWDGTLRLWDLATGE---STRRFVGHTKDVLSVAFSTDNRQI-VSGSRDKTIKLWNTLGVCK 139 (315)
T ss_pred EecceEEcc-CCceEEeccccceEEEEEecCCc---EEEEEEecCCceEEEEecCCCcee-ecCCCcceeeeeeecccEE
Confidence 455666665 56677787778889999998864 122333334567899999766555 6777778888888766544
Q ss_pred EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCC
Q psy13635 152 KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAH 230 (357)
Q Consensus 152 ~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~ 230 (357)
-.+.. +. .-++...+.+.|.....|+...+ ...+.+-|+++-..+.-..+.-...+.++++|+
T Consensus 140 ~t~~~-~~--------------~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpD- 203 (315)
T KOG0279|consen 140 YTIHE-DS--------------HREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPD- 203 (315)
T ss_pred EEEec-CC--------------CcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCC-
Confidence 33321 11 02477888888887556555554 446777788876655444444567788999986
Q ss_pred CEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 231 GYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 231 g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
|.|.-.-.. .+.++-.+++.+....-+ +.....+.+++. .++.+.+-.....|...+++...
T Consensus 204 GslcasGgk--dg~~~LwdL~~~k~lysl-~a~~~v~sl~fs--pnrywL~~at~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 204 GSLCASGGK--DGEAMLWDLNEGKNLYSL-EAFDIVNSLCFS--PNRYWLCAATATSIKIWDLESKA 265 (315)
T ss_pred CCEEecCCC--CceEEEEEccCCceeEec-cCCCeEeeEEec--CCceeEeeccCCceEEEeccchh
Confidence 777766333 478888888765442222 344556788874 34444455555678888877653
No 149
>KOG4649|consensus
Probab=92.46 E-value=7.4 Score=34.53 Aligned_cols=137 Identities=9% Similarity=0.042 Sum_probs=76.4
Q ss_pred EEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCC-EEEEEEcCCCceEEE
Q psy13635 76 IDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETN-KLEVSSLDGKKRKVL 154 (357)
Q Consensus 76 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~-~I~~~~~~g~~~~~~ 154 (357)
+++|+..|++||-..-..+|.... .+..++ +.+-..++.||+-+..++ +++.+..-+.....
T Consensus 36 ~avd~~sG~~~We~ilg~RiE~sa-----------~vvgdf-----VV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~- 98 (354)
T KOG4649|consen 36 IAVDPQSGNLIWEAILGVRIECSA-----------IVVGDF-----VVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR- 98 (354)
T ss_pred EEecCCCCcEEeehhhCceeeeee-----------EEECCE-----EEEEEccCcEEEEEecchhheeeeeehhhhccc-
Confidence 456778899999776665544222 122222 455567899999998776 66655443322110
Q ss_pred EecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEE
Q psy13635 155 YWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLF 234 (357)
Q Consensus 155 ~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly 234 (357)
-.+|+.+|.||. ...++..+..|+......--..-+...-.+-+++|-.+.||
T Consensus 99 --------------------------a~~d~~~glIyc-gshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly 151 (354)
T KOG4649|consen 99 --------------------------AQCDFDGGLIYC-GSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLY 151 (354)
T ss_pred --------------------------eEEcCCCceEEE-ecCCCcEEEecccccceEEecccCCceeccceecCCCceEE
Confidence 123544555553 34445566665544332111110111112335777779999
Q ss_pred EEeCCCCCCeEEEEecCCCceEEEe
Q psy13635 235 WSDWNEKRPKIERSLLNGGERVLLV 259 (357)
Q Consensus 235 ~~d~~~~~~~I~~~~~dg~~~~~~~ 259 (357)
++... +.+.+++.+-....++.
T Consensus 152 ~a~t~---G~vlavt~~~~~~~~~w 173 (354)
T KOG4649|consen 152 AAITA---GAVLAVTKNPYSSTEFW 173 (354)
T ss_pred EEecc---ceEEEEccCCCCcceeh
Confidence 99987 57877777665555544
No 150
>KOG0289|consensus
Probab=92.43 E-value=10 Score=35.99 Aligned_cols=197 Identities=12% Similarity=0.090 Sum_probs=109.7
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
....++..++.+..+.|++.. +.+.-.++.....-..++.. ...+ .-...++. .+|.||.+...
T Consensus 304 ~~V~~ls~h~tgeYllsAs~d-~~w~Fsd~~~g~~lt~vs~~---~s~v-----------~~ts~~fH-pDgLifgtgt~ 367 (506)
T KOG0289|consen 304 EPVTGLSLHPTGEYLLSASND-GTWAFSDISSGSQLTVVSDE---TSDV-----------EYTSAAFH-PDGLIFGTGTP 367 (506)
T ss_pred ccceeeeeccCCcEEEEecCC-ceEEEEEccCCcEEEEEeec---cccc-----------eeEEeeEc-CCceEEeccCC
Confidence 446888999877777777643 44444444333222222211 0000 23445565 35688888888
Q ss_pred CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC-ceEEEeeCCCCCceEEEEecCC
Q psy13635 197 TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG-ERVLLVKDRLGWPNGITLDVDN 275 (357)
Q Consensus 197 ~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~-~~~~~~~~~l~~P~giaid~~~ 275 (357)
++.+...++.......-..........|++.. +|+-..+.... +.|...++.-. +...+........+.+.+|..+
T Consensus 368 d~~vkiwdlks~~~~a~Fpght~~vk~i~FsE-NGY~Lat~add--~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SG 444 (506)
T KOG0289|consen 368 DGVVKIWDLKSQTNVAKFPGHTGPVKAISFSE-NGYWLATAADD--GSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSG 444 (506)
T ss_pred CceEEEEEcCCccccccCCCCCCceeEEEecc-CceEEEEEecC--CeEEEEEehhhcccceeeccccccceeEEEcCCC
Confidence 77777777765443222333334567899984 57555554442 34665555432 3334433444457889999666
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCeEEEec--CCCCceEEEEEECCEEEEEeCCCCeEEEEe
Q psy13635 276 EKLYWCDAKTDKIEMIDFDGNNRRELIN--ENLPHVFGISLLGDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 276 ~~lY~~d~~~~~I~~~~~dG~~~~~i~~--~~~~~p~gia~~~~~ly~td~~~~~I~~~~ 333 (357)
.+|-.+ ...=.|+.+......=+.+.. .......|+.+.+..-|..+...+++.++-
T Consensus 445 t~L~~~-g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 445 TYLGIA-GSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLY 503 (506)
T ss_pred CeEEee-cceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEe
Confidence 555444 344466666654433333322 122344667777778888887777766543
No 151
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=92.41 E-value=13 Score=37.10 Aligned_cols=31 Identities=13% Similarity=0.151 Sum_probs=20.9
Q ss_pred EEEECCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 312 ISLLGDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 312 ia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
++..++ +|+.-...+.++.+|..+|+.+-..
T Consensus 468 l~t~g~-lvf~g~~~G~l~a~D~~TGe~lw~~ 498 (527)
T TIGR03075 468 LATAGD-LVFYGTLEGYFKAFDAKTGEELWKF 498 (527)
T ss_pred eEECCc-EEEEECCCCeEEEEECCCCCEeEEE
Confidence 344445 4444456688999999999876654
No 152
>KOG0646|consensus
Probab=92.35 E-value=11 Score=36.05 Aligned_cols=203 Identities=14% Similarity=0.063 Sum_probs=115.9
Q ss_pred EEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceE
Q psy13635 73 GAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK 152 (357)
Q Consensus 73 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~ 152 (357)
..+++-++ .|...++..-.+.||-..+..+.. ..++........-|-+. .++..++|.+.++.|.+..+--
T Consensus 84 v~al~s~n-~G~~l~ag~i~g~lYlWelssG~L---L~v~~aHYQ~ITcL~fs-~dgs~iiTgskDg~V~vW~l~~---- 154 (476)
T KOG0646|consen 84 VHALASSN-LGYFLLAGTISGNLYLWELSSGIL---LNVLSAHYQSITCLKFS-DDGSHIITGSKDGAVLVWLLTD---- 154 (476)
T ss_pred eeeeecCC-CceEEEeecccCcEEEEEeccccH---HHHHHhhccceeEEEEe-CCCcEEEecCCCccEEEEEEEe----
Confidence 45666665 555556665677888888877642 22334445667777776 5788888988888888765411
Q ss_pred EEEecCCC-CcceeeeeccCcccccCCceEEEeC--CCCeEEEEeCCCCeEEEEEcCCCce-EEEecCCCCCceEEEEeC
Q psy13635 153 VLYWEDID-QPRAIASYKLPTIEVEHPDGVAVDW--VARNLYWTDTGTDRIEVCRLEGTHR-KVLVNTDLVEPRAITLSP 228 (357)
Q Consensus 153 ~~~~~~~~-~p~~i~~~~~~~~~~~~p~glavD~--~~~~lY~td~~~~~I~~~~~~g~~~-~~~~~~~~~~P~giavd~ 228 (357)
++...-+ .|.++.. -.+-.-...++.++. .+.+|| |-...+.+...++.+... ..+.. -..+..+++||
T Consensus 155 -lv~a~~~~~~~p~~~---f~~HtlsITDl~ig~Gg~~~rl~-TaS~D~t~k~wdlS~g~LLlti~f--p~si~av~lDp 227 (476)
T KOG0646|consen 155 -LVSADNDHSVKPLHI---FSDHTLSITDLQIGSGGTNARLY-TASEDRTIKLWDLSLGVLLLTITF--PSSIKAVALDP 227 (476)
T ss_pred -ecccccCCCccceee---eccCcceeEEEEecCCCccceEE-EecCCceEEEEEeccceeeEEEec--CCcceeEEEcc
Confidence 1110000 0111100 000000223444432 345666 334445666666664432 22222 24688999999
Q ss_pred CCCEEEEEeCCCCCCeEEEEecCCCc-----------------eEEEeeCCC-CCceEEEEecCCCEEEEEeCCCCeEEE
Q psy13635 229 AHGYLFWSDWNEKRPKIERSLLNGGE-----------------RVLLVKDRL-GWPNGITLDVDNEKLYWCDAKTDKIEM 290 (357)
Q Consensus 229 ~~g~Ly~~d~~~~~~~I~~~~~dg~~-----------------~~~~~~~~l-~~P~giaid~~~~~lY~~d~~~~~I~~ 290 (357)
.+.++|+-... ++|+..++.+.. ...+....- .....|++. .++.|..+-...+.+..
T Consensus 228 ae~~~yiGt~~---G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais-~DgtlLlSGd~dg~Vcv 303 (476)
T KOG0646|consen 228 AERVVYIGTEE---GKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAIS-TDGTLLLSGDEDGKVCV 303 (476)
T ss_pred cccEEEecCCc---ceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEe-cCccEEEeeCCCCCEEE
Confidence 98888887665 688887765432 112221111 256789997 67888888777778777
Q ss_pred EeCCC
Q psy13635 291 IDFDG 295 (357)
Q Consensus 291 ~~~dG 295 (357)
.+.-.
T Consensus 304 Wdi~S 308 (476)
T KOG0646|consen 304 WDIYS 308 (476)
T ss_pred Eecch
Confidence 77543
No 153
>KOG0266|consensus
Probab=92.31 E-value=12 Score=36.53 Aligned_cols=247 Identities=12% Similarity=0.119 Sum_probs=138.9
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc-CC-
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL-DG- 148 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~-~g- 148 (357)
.....++|.+.+.. .++-..++.|.-....+... .....+........++++.+ ++....+-...++|...+. +.
T Consensus 160 ~sv~~~~fs~~g~~-l~~~~~~~~i~~~~~~~~~~-~~~~~l~~h~~~v~~~~fs~-d~~~l~s~s~D~tiriwd~~~~~ 236 (456)
T KOG0266|consen 160 PSVTCVDFSPDGRA-LAAASSDGLIRIWKLEGIKS-NLLRELSGHTRGVSDVAFSP-DGSYLLSGSDDKTLRIWDLKDDG 236 (456)
T ss_pred CceEEEEEcCCCCe-EEEccCCCcEEEeecccccc-hhhccccccccceeeeEECC-CCcEEEEecCCceEEEeeccCCC
Confidence 44566788876655 55555555555555533320 01112233345578888986 4556667777888888887 33
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeC
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSP 228 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~ 228 (357)
...+++... -....++++.+.+ +++++....+.|..-+..+......+...-..-.++++.+
T Consensus 237 ~~~~~l~gH-----------------~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~ 298 (456)
T KOG0266|consen 237 RNLKTLKGH-----------------STYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP 298 (456)
T ss_pred eEEEEecCC-----------------CCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC
Confidence 333444211 1256889999877 8888888888899888886444444444455778899997
Q ss_pred CCCEEEEEeCCCCCCeEEEEecCCCceE--EEeeCCCCCc---eEEEEecCCCEEEEEeCCCCeEEEEeCCCC-CeEEEe
Q psy13635 229 AHGYLFWSDWNEKRPKIERSLLNGGERV--LLVKDRLGWP---NGITLDVDNEKLYWCDAKTDKIEMIDFDGN-NRRELI 302 (357)
Q Consensus 229 ~~g~Ly~~d~~~~~~~I~~~~~dg~~~~--~~~~~~l~~P---~giaid~~~~~lY~~d~~~~~I~~~~~dG~-~~~~i~ 302 (357)
. |.++++-... +.|...+....... ..+. +...| ..+.+++.+ ...++-...+.+...++... ......
T Consensus 299 d-~~~l~s~s~d--~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~fsp~~-~~ll~~~~d~~~~~w~l~~~~~~~~~~ 373 (456)
T KOG0266|consen 299 D-GNLLVSASYD--GTIRVWDLETGSKLCLKLLS-GAENSAPVTSVQFSPNG-KYLLSASLDRTLKLWDLRSGKSVGTYT 373 (456)
T ss_pred C-CCEEEEcCCC--ccEEEEECCCCceeeeeccc-CCCCCCceeEEEECCCC-cEEEEecCCCeEEEEEccCCcceeeec
Confidence 6 6666666553 58888888877632 2222 22233 677777544 44445555556666666532 222221
Q ss_pred cCCCC--ceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 303 NENLP--HVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 303 ~~~~~--~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
.-... -.+..... ++....+-...+.|...+..++..+..+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l 417 (456)
T KOG0266|consen 374 GHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRL 417 (456)
T ss_pred ccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhh
Confidence 10111 11111112 3444445455566666666544444433
No 154
>KOG4378|consensus
Probab=92.28 E-value=11 Score=36.30 Aligned_cols=179 Identities=12% Similarity=0.069 Sum_probs=106.2
Q ss_pred EEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC-cCCceeEEEEcCCCe
Q psy13635 52 IRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG-LITPDGLAIDWLTEK 130 (357)
Q Consensus 52 i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~p~glavd~~~~~ 130 (357)
+.+.|+....-...+........+|+|...+..|-=...+ +.|..-.+.... ..+.+..+ -....=+.+.+..+.
T Consensus 103 Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~g-Gdiiih~~~t~~---~tt~f~~~sgqsvRll~ys~skr~ 178 (673)
T KOG4378|consen 103 VKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDG-GDIIIHGTKTKQ---KTTTFTIDSGQSVRLLRYSPSKRF 178 (673)
T ss_pred eeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccC-CcEEEEecccCc---cccceecCCCCeEEEeecccccce
Confidence 4445553322223333344567888887766655322222 333333333221 12222222 233456677888888
Q ss_pred EEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCce
Q psy13635 131 LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHR 210 (357)
Q Consensus 131 ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~ 210 (357)
|..+-+.+|.|...+..|.....-...... .-..||.+.|.+..|+++-....+|..+|......
T Consensus 179 lL~~asd~G~VtlwDv~g~sp~~~~~~~Hs---------------AP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s 243 (673)
T KOG4378|consen 179 LLSIASDKGAVTLWDVQGMSPIFHASEAHS---------------APCRGICFSPSNEALLVSVGYDKKINIYDIRSQAS 243 (673)
T ss_pred eeEeeccCCeEEEEeccCCCcccchhhhcc---------------CCcCcceecCCccceEEEecccceEEEeecccccc
Confidence 988888899999999988765443322211 13578999999999999988888999988764332
Q ss_pred E-EEecCCCCCc-eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce
Q psy13635 211 K-VLVNTDLVEP-RAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER 255 (357)
Q Consensus 211 ~-~~~~~~~~~P-~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~ 255 (357)
. .+.. .+| ..+++.+. |....+-.. +++|...++.+...
T Consensus 244 ~~~l~y---~~Plstvaf~~~-G~~L~aG~s--~G~~i~YD~R~~k~ 284 (673)
T KOG4378|consen 244 TDRLTY---SHPLSTVAFSEC-GTYLCAGNS--KGELIAYDMRSTKA 284 (673)
T ss_pred cceeee---cCCcceeeecCC-ceEEEeecC--CceEEEEecccCCC
Confidence 1 2221 234 46777754 665555544 47888888887644
No 155
>KOG0294|consensus
Probab=92.04 E-value=9.3 Score=34.73 Aligned_cols=224 Identities=12% Similarity=0.052 Sum_probs=126.2
Q ss_pred eEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCC--EEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCC
Q psy13635 42 QMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKS--MVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT 118 (357)
Q Consensus 42 ~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~--~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 118 (357)
|++.-.+ +..|+.+|+....+...+....+...++.|.+.-. .| .+...++.|...+...-. ....+...-..
T Consensus 54 ~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shL-lS~sdDG~i~iw~~~~W~---~~~slK~H~~~ 129 (362)
T KOG0294|consen 54 PYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHL-LSGSDDGHIIIWRVGSWE---LLKSLKAHKGQ 129 (362)
T ss_pred eeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhhe-eeecCCCcEEEEEcCCeE---Eeeeecccccc
Confidence 4444333 34599999988666777777788889998886543 22 244455666655554432 12222233345
Q ss_pred ceeEEEEcCCCeEEEEeCCCCEEEEEEc-CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 119 PDGLAIDWLTEKLYWTDSETNKLEVSSL-DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~~~I~~~~~-~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
..+|+++| +++|-.+=.+.+.+...++ .|+.-.++-.. +.+.-+..++.+.+.++.-.
T Consensus 130 Vt~lsiHP-S~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~------------------~~at~v~w~~~Gd~F~v~~~-- 188 (362)
T KOG0294|consen 130 VTDLSIHP-SGKLALSVGGDQVLRTWNLVRGRVAFVLNLK------------------NKATLVSWSPQGDHFVVSGR-- 188 (362)
T ss_pred cceeEecC-CCceEEEEcCCceeeeehhhcCccceeeccC------------------CcceeeEEcCCCCEEEEEec--
Confidence 89999996 7889888888888888776 33332222101 24555777766665655544
Q ss_pred CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEE-EecCCC
Q psy13635 198 DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGIT-LDVDNE 276 (357)
Q Consensus 198 ~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gia-id~~~~ 276 (357)
++|....++....-..+. .-..+..+.+. ..+.|.+.-.. ..|...+.|...........-.+.-+++ ++..++
T Consensus 189 ~~i~i~q~d~A~v~~~i~-~~~r~l~~~~l-~~~~L~vG~d~---~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~ 263 (362)
T KOG0294|consen 189 NKIDIYQLDNASVFREIE-NPKRILCATFL-DGSELLVGGDN---EWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEH 263 (362)
T ss_pred cEEEEEecccHhHhhhhh-ccccceeeeec-CCceEEEecCC---ceEEEeccCCCccceeeecchhheeeeEEEecCCc
Confidence 466666655432211111 11334445554 34566665433 4666666664222222222223444565 444556
Q ss_pred EEEEEeCCCCeEEEEeCCC
Q psy13635 277 KLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 277 ~lY~~d~~~~~I~~~~~dG 295 (357)
.+.++-+..|.|..-+.+-
T Consensus 264 ~~lvTaSSDG~I~vWd~~~ 282 (362)
T KOG0294|consen 264 EYLVTASSDGFIKVWDIDM 282 (362)
T ss_pred eEEEEeccCceEEEEEccc
Confidence 7777777777776666654
No 156
>KOG0303|consensus
Probab=91.98 E-value=11 Score=35.38 Aligned_cols=236 Identities=12% Similarity=0.091 Sum_probs=125.3
Q ss_pred eecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCe--EEEEEcCCCCc--ceeEE
Q psy13635 35 LSHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEM--ISCCTFDGNNV--GSKHN 110 (357)
Q Consensus 35 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~--I~~~~~~g~~~--~~~~~ 110 (357)
.-.++..+|+.+... .+-|+|- .+.+.-..-.....+++.|.++.+.=+...+.. |+.+.-+|... .+...
T Consensus 51 ~easgGgaf~ViPl~-k~Gr~d~----~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv 125 (472)
T KOG0303|consen 51 IEASGGGAFLVIPLV-KTGRMDA----SYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVV 125 (472)
T ss_pred EecCCCcceeecccc-cccccCC----CCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceE
Confidence 345566677766554 3444443 222222333445677788877776655444443 45555455432 11222
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
.+........-++.++...++..+....+.|...+.......+.. ..|- ....+.+. .+|.+
T Consensus 126 ~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l----~hpd-------------~i~S~sfn-~dGs~ 187 (472)
T KOG0303|consen 126 ELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITL----DHPD-------------MVYSMSFN-RDGSL 187 (472)
T ss_pred EEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeec----CCCC-------------eEEEEEec-cCCce
Confidence 333333455667889999999999988899998887654322211 1111 12345555 56778
Q ss_pred EEEeCCCCeEEEEEcCCCc-eEEE-ecCCCCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEecCCCceEEEeeCCCCCce
Q psy13635 191 YWTDTGTDRIEVCRLEGTH-RKVL-VNTDLVEPRAITLSPAHGYLFWSDWNEK-RPKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~-~~~~-~~~~~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
++|.....+|.++++.... .... ..++...++.|-+. +|.++-|-.... ..++.--+.+.-+. .+....+..-+
T Consensus 188 l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~--~g~i~tTGfsr~seRq~aLwdp~nl~e-P~~~~elDtSn 264 (472)
T KOG0303|consen 188 LCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLA--SGKIFTTGFSRMSERQIALWDPNNLEE-PIALQELDTSN 264 (472)
T ss_pred eeeecccceeEEEcCCCCcEeeecccccCCCcceeEEec--cCceeeeccccccccceeccCcccccC-cceeEEeccCC
Confidence 8888877899999887433 2222 22233445555554 466655544321 11221111111100 01112223333
Q ss_pred EEE---EecCCCEEEEEeCCCCeEEEEeCCCC
Q psy13635 268 GIT---LDVDNEKLYWCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 268 gia---id~~~~~lY~~d~~~~~I~~~~~dG~ 296 (357)
|+- .|++.+-||.+-.+.+.|+.+.....
T Consensus 265 Gvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d 296 (472)
T KOG0303|consen 265 GVLLPFYDPDTSIVYLCGKGDSSIRYFEITNE 296 (472)
T ss_pred ceEEeeecCCCCEEEEEecCCcceEEEEecCC
Confidence 443 35667778888877777777766443
No 157
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=91.95 E-value=2.1 Score=41.91 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=66.3
Q ss_pred CcCCceeEEEEcCCCeEEEEeCCCC----------------EEEEEEcCCC-------ceEEEEecCCCCcceeee---e
Q psy13635 115 GLITPDGLAIDWLTEKLYWTDSETN----------------KLEVSSLDGK-------KRKVLYWEDIDQPRAIAS---Y 168 (357)
Q Consensus 115 ~~~~p~glavd~~~~~ly~td~~~~----------------~I~~~~~~g~-------~~~~~~~~~~~~p~~i~~---~ 168 (357)
....|+++++.+..+.+|++..+++ +|.|+...+. .-+.++..+ +|..+-. -
T Consensus 415 ~mdRpE~i~~~p~~g~Vy~~lTNn~~r~~~~aNpr~~n~~G~I~r~~p~~~d~t~~~ftWdlF~~aG--~~~~~~~~~~~ 492 (616)
T COG3211 415 PMDRPEWIAVNPGTGEVYFTLTNNGKRSDDAANPRAKNGYGQIVRWIPATGDHTDTKFTWDLFVEAG--NPSVLEGGASA 492 (616)
T ss_pred cccCccceeecCCcceEEEEeCCCCccccccCCCcccccccceEEEecCCCCccCccceeeeeeecC--Ccccccccccc
Confidence 3578999999999999999986544 5666655432 112222211 1111000 0
Q ss_pred ccCcccccCCceEEEeCCCCeEEEE-eCCCC----eEEEEE----cCCC--ceEEEecCC-CCCceEEEEeCCCCEEEEE
Q psy13635 169 KLPTIEVEHPDGVAVDWVARNLYWT-DTGTD----RIEVCR----LEGT--HRKVLVNTD-LVEPRAITLSPAHGYLFWS 236 (357)
Q Consensus 169 ~~~~~~~~~p~glavD~~~~~lY~t-d~~~~----~I~~~~----~~g~--~~~~~~~~~-~~~P~giavd~~~g~Ly~~ 236 (357)
.+...-|..|.+|+||+. |+|+++ |.... +..-.. .++. ..+..+... -..-.|.++.|+.+.||+.
T Consensus 493 ~~~~~~f~~PDnl~fD~~-GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlFV~ 571 (616)
T COG3211 493 NINANWFNSPDNLAFDPW-GRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLFVN 571 (616)
T ss_pred CcccccccCCCceEECCC-CCEEEEecCCCCccCcccccccccccCCCccceeeeeccCCCcceeecceeCCCCceEEEE
Confidence 011234677999999965 566654 44432 111111 2221 111122111 1345688999988889888
Q ss_pred eCCC
Q psy13635 237 DWNE 240 (357)
Q Consensus 237 d~~~ 240 (357)
-...
T Consensus 572 vQHP 575 (616)
T COG3211 572 VQHP 575 (616)
T ss_pred ecCC
Confidence 7663
No 158
>PTZ00421 coronin; Provisional
Probab=91.81 E-value=14 Score=36.40 Aligned_cols=216 Identities=11% Similarity=0.008 Sum_probs=113.2
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
-....++++++..++++++-+.++.|...++.......- ...| +.. ...--.....+++.+..+.+.++-.
T Consensus 75 ~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~----~~~~--l~~---L~gH~~~V~~l~f~P~~~~iLaSgs 145 (493)
T PTZ00421 75 EGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQN----ISDP--IVH---LQGHTKKVGIVSFHPSAMNVLASAG 145 (493)
T ss_pred CCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccc----cCcc--eEE---ecCCCCcEEEEEeCcCCCCEEEEEe
Confidence 345678888875666777777888999888753211000 0000 000 0001124567888877667777777
Q ss_pred CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-CCCceEEEEecC
Q psy13635 196 GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR-LGWPNGITLDVD 274 (357)
Q Consensus 196 ~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~-l~~P~giaid~~ 274 (357)
..+.|..-++........+........+++++|. |.+..+-... +.|...++........+... -.....+...+.
T Consensus 146 ~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spd-G~lLatgs~D--g~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~ 222 (493)
T PTZ00421 146 ADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLD-GSLLCTTSKD--KKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKR 222 (493)
T ss_pred CCCEEEEEECCCCeEEEEEcCCCCceEEEEEECC-CCEEEEecCC--CEEEEEECCCCcEEEEEecCCCCcceEEEEcCC
Confidence 7788888888754433333333445788999986 5555554442 47777777543332222111 111223344334
Q ss_pred CCEEEEEe---CCCCeEEEEeCCCCC-eEEEecCCCCceEEE-EEE--CCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 275 NEKLYWCD---AKTDKIEMIDFDGNN-RRELINENLPHVFGI-SLL--GDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 275 ~~~lY~~d---~~~~~I~~~~~dG~~-~~~i~~~~~~~p~gi-a~~--~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
.+.+..+- ...+.|...|+.... ..............+ .++ ++.+|.+..+.+.|+..+..+++.....
T Consensus 223 ~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 223 KDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred CCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEe
Confidence 44554332 224567777764322 211111111112222 233 3556666555678888887666654443
No 159
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=91.51 E-value=12 Score=35.13 Aligned_cols=145 Identities=14% Similarity=0.071 Sum_probs=80.3
Q ss_pred CCCeEEEEeCCCCeEEEEEcCCCceE---EEe--cCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEec-CCCceEEEe
Q psy13635 186 VARNLYWTDTGTDRIEVCRLEGTHRK---VLV--NTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLL-NGGERVLLV 259 (357)
Q Consensus 186 ~~~~lY~td~~~~~I~~~~~~g~~~~---~~~--~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~-dg~~~~~~~ 259 (357)
.++++|+. ...+.|...++++.... .+. ...+..|... + .|+||+.++. ++++..+. +|......-
T Consensus 67 ~dg~v~~~-~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~--~--~G~i~~g~~~---g~~y~ld~~~G~~~W~~~ 138 (370)
T COG1520 67 GDGTVYVG-TRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILG--S--DGKIYVGSWD---GKLYALDASTGTLVWSRN 138 (370)
T ss_pred eCCeEEEe-cCCCcEEEEeCCCCcEEecccCcCcceeccCceEE--e--CCeEEEeccc---ceEEEEECCCCcEEEEEe
Confidence 46788876 33347777777755421 111 0122333333 3 5889999887 47888888 666554443
Q ss_pred eCC-CCCceEEEEecCCCEEEEEeCCCCeEEEEeCC-CCCeEEEecC---CCCceEEEEEECCEEEEEeCC-CCeEEEEe
Q psy13635 260 KDR-LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD-GNNRRELINE---NLPHVFGISLLGDYVYWTDWQ-RRSIDRVN 333 (357)
Q Consensus 260 ~~~-l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~~~---~~~~p~gia~~~~~ly~td~~-~~~I~~~~ 333 (357)
... .....+..+ .++.+|+.. ..+.++.++.+ |..+=..-.. .........+.++.+|+.... ++.++.++
T Consensus 139 ~~~~~~~~~~~v~--~~~~v~~~s-~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~ 215 (370)
T COG1520 139 VGGSPYYASPPVV--GDGTVYVGT-DDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALN 215 (370)
T ss_pred cCCCeEEecCcEE--cCcEEEEec-CCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEE
Confidence 233 111122222 567788774 45788888876 6543221110 111122222567888887653 44678888
Q ss_pred CccCceeE
Q psy13635 334 KITGNDRE 341 (357)
Q Consensus 334 ~~~g~~~~ 341 (357)
..+|+..-
T Consensus 216 ~~~G~~~w 223 (370)
T COG1520 216 AEDGTLKW 223 (370)
T ss_pred ccCCcEee
Confidence 77777544
No 160
>KOG0282|consensus
Probab=91.46 E-value=9.4 Score=36.56 Aligned_cols=199 Identities=12% Similarity=0.078 Sum_probs=113.1
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR 151 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~ 151 (357)
...++.+-+..+.|+.+...++.|+..+.-+.. .........-.....+++.. .+.=|.+-+-...|.-.+......
T Consensus 216 gvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~--~~lrtf~gH~k~Vrd~~~s~-~g~~fLS~sfD~~lKlwDtETG~~ 292 (503)
T KOG0282|consen 216 GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR--RCLRTFKGHRKPVRDASFNN-CGTSFLSASFDRFLKLWDTETGQV 292 (503)
T ss_pred ccchhhhccceeeEEEecCCCceEEEEEEecCc--ceehhhhcchhhhhhhhccc-cCCeeeeeecceeeeeeccccceE
Confidence 355667777788999998888888877765531 11222221222334455553 333444444455555555544433
Q ss_pred EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCC
Q psy13635 152 KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHG 231 (357)
Q Consensus 152 ~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g 231 (357)
..-+..+ .-|..+.+.|.+.++|++....++|...|........-....+.....|.+-+ .|
T Consensus 293 ~~~f~~~-----------------~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~-~g 354 (503)
T KOG0282|consen 293 LSRFHLD-----------------KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVD-EG 354 (503)
T ss_pred EEEEecC-----------------CCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEcc-CC
Confidence 3333322 25777888888889999999999999998775432111123466677788775 46
Q ss_pred EEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeC
Q psy13635 232 YLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 232 ~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~ 293 (357)
+=|++......-+|+-....-- ...+.......--.+++. .++..+.+..-.+.|..+..
T Consensus 355 ~rFissSDdks~riWe~~~~v~-ik~i~~~~~hsmP~~~~~-P~~~~~~aQs~dN~i~ifs~ 414 (503)
T KOG0282|consen 355 RRFISSSDDKSVRIWENRIPVP-IKNIADPEMHTMPCLTLH-PNGKWFAAQSMDNYIAIFST 414 (503)
T ss_pred ceEeeeccCccEEEEEcCCCcc-chhhcchhhccCcceecC-CCCCeehhhccCceEEEEec
Confidence 6677666543234443332211 111111222222356665 56777778877788777754
No 161
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=90.90 E-value=17 Score=35.71 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=23.8
Q ss_pred EEEECCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 312 ISLLGDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 312 ia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
+++.++.||+.+ ..+.|+.+++.+|+.+-..
T Consensus 402 ~~~~g~~v~~g~-~dG~l~ald~~tG~~lW~~ 432 (488)
T cd00216 402 LATAGNLVFAGA-ADGYFRAFDATTGKELWKF 432 (488)
T ss_pred eEecCCeEEEEC-CCCeEEEEECCCCceeeEE
Confidence 566778899887 5688999998888866543
No 162
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=90.77 E-value=9.9 Score=32.66 Aligned_cols=193 Identities=13% Similarity=0.154 Sum_probs=96.2
Q ss_pred cEEEEEEEccCCEEEEEeC--CCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 72 EGAAIDYYYKKSMVCWTDH--GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
...|+.++ ++.||.+-. +..+|++.++.+... ...+.+...-..-+|+..- ++.+|.--...+.-.+++.+.-
T Consensus 47 fTQGL~~~--~g~i~esTG~yg~S~ir~~~L~~gq~-~~s~~l~~~~~FgEGit~~--gd~~y~LTw~egvaf~~d~~t~ 121 (262)
T COG3823 47 FTQGLEYL--DGHILESTGLYGFSKIRVSDLTTGQE-IFSEKLAPDTVFGEGITKL--GDYFYQLTWKEGVAFKYDADTL 121 (262)
T ss_pred hhcceeee--CCEEEEeccccccceeEEEeccCceE-EEEeecCCccccccceeec--cceEEEEEeccceeEEEChHHh
Confidence 34566665 568887744 334788888886520 1111222112223555542 5556655544444444444321
Q ss_pred ce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC--ceEEEec-C--CCCCceE
Q psy13635 150 KR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT--HRKVLVN-T--DLVEPRA 223 (357)
Q Consensus 150 ~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~--~~~~~~~-~--~~~~P~g 223 (357)
.. ..+--+ ..-.||+-| +.+|..+|.. ..++--|+..- ..++.+. . ....-+-
T Consensus 122 ~~lg~~~y~------------------GeGWgLt~d--~~~LimsdGs-atL~frdP~tfa~~~~v~VT~~g~pv~~LNE 180 (262)
T COG3823 122 EELGRFSYE------------------GEGWGLTSD--DKNLIMSDGS-ATLQFRDPKTFAELDTVQVTDDGVPVSKLNE 180 (262)
T ss_pred hhhcccccC------------------CcceeeecC--CcceEeeCCc-eEEEecCHHHhhhcceEEEEECCeecccccc
Confidence 11 011000 122455555 3445555443 34443333210 0111111 0 1111222
Q ss_pred EEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee-C-----------CCCCceEEEEecCCCEEEEEeCCCCeEEEE
Q psy13635 224 ITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-D-----------RLGWPNGITLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-~-----------~l~~P~giaid~~~~~lY~~d~~~~~I~~~ 291 (357)
+.. -.|.||---|.+. +|.|++++.+.....+. + ...-++|||.|+..+++|++-..-..+.-+
T Consensus 181 LE~--VdG~lyANVw~t~--~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK~wp~lfEV 256 (262)
T COG3823 181 LEW--VDGELYANVWQTT--RIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGKLWPLLFEV 256 (262)
T ss_pred eee--eccEEEEeeeeec--ceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecCcCceeEEE
Confidence 222 2488887777754 99999988765544432 1 234589999999999999986554555555
Q ss_pred eCC
Q psy13635 292 DFD 294 (357)
Q Consensus 292 ~~d 294 (357)
.++
T Consensus 257 k~~ 259 (262)
T COG3823 257 KLD 259 (262)
T ss_pred Eec
Confidence 443
No 163
>KOG0282|consensus
Probab=90.53 E-value=17 Score=34.92 Aligned_cols=186 Identities=9% Similarity=0.004 Sum_probs=108.6
Q ss_pred EEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeE
Q psy13635 43 MLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGL 122 (357)
Q Consensus 43 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~gl 122 (357)
||-.+-+..|+..|.+.+ ....-...-.-|.-+.++|.+.++|++...+++|...++..+..+ ......+.....|
T Consensus 273 fLS~sfD~~lKlwDtETG-~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvv---qeYd~hLg~i~~i 348 (503)
T KOG0282|consen 273 FLSASFDRFLKLWDTETG-QVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVV---QEYDRHLGAILDI 348 (503)
T ss_pred eeeeecceeeeeeccccc-eEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHH---HHHHhhhhheeee
Confidence 333333445666666552 333334445568888999988899999999999999999877532 1222345566777
Q ss_pred EEEcCCCeEEEEeCCCCEEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEE
Q psy13635 123 AIDWLTEKLYWTDSETNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIE 201 (357)
Q Consensus 123 avd~~~~~ly~td~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~ 201 (357)
.+=+ .+.=|++.+..+.+...+.+-... +.+. .+ ....-..+++.| ++..+.+....++|.
T Consensus 349 ~F~~-~g~rFissSDdks~riWe~~~~v~ik~i~-----~~-----------~~hsmP~~~~~P-~~~~~~aQs~dN~i~ 410 (503)
T KOG0282|consen 349 TFVD-EGRRFISSSDDKSVRIWENRIPVPIKNIA-----DP-----------EMHTMPCLTLHP-NGKWFAAQSMDNYIA 410 (503)
T ss_pred EEcc-CCceEeeeccCccEEEEEcCCCccchhhc-----ch-----------hhccCcceecCC-CCCeehhhccCceEE
Confidence 7753 666777777777776665432211 1111 11 112233456664 446666777777777
Q ss_pred EEEcCCCce---EEEecC--CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 202 VCRLEGTHR---KVLVNT--DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 202 ~~~~~g~~~---~~~~~~--~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
.+...-..+ +....+ --..+..+.++|+.+.|.--|.. ++++..+....
T Consensus 411 ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsd---G~v~~wdwkt~ 464 (503)
T KOG0282|consen 411 IFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSD---GKVNFWDWKTT 464 (503)
T ss_pred EEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCC---ccEEEeechhh
Confidence 766443221 111111 12357788888876666666655 56666665443
No 164
>KOG2048|consensus
Probab=90.34 E-value=21 Score=35.73 Aligned_cols=209 Identities=15% Similarity=0.065 Sum_probs=123.3
Q ss_pred ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC---CcCCceeEEEEcCCCeEEEEeCCCCEEEE
Q psy13635 67 IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN---GLITPDGLAIDWLTEKLYWTDSETNKLEV 143 (357)
Q Consensus 67 ~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~---~~~~p~glavd~~~~~ly~td~~~~~I~~ 143 (357)
.+...+...-++.|..+.|-++-...-+||+...++.- . ...+.. -+.....+.+--..++++++......+..
T Consensus 379 ~k~~~nIs~~aiSPdg~~Ia~st~~~~~iy~L~~~~~v--k-~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~ 455 (691)
T KOG2048|consen 379 TKEKENISCAAISPDGNLIAISTVSRTKIYRLQPDPNV--K-VINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEE 455 (691)
T ss_pred cCCccceeeeccCCCCCEEEEeeccceEEEEeccCcce--e-EEEeccchhhhccceeeEEEecCceEEEEecccceeEE
Confidence 34555666667889999999988888899999998842 1 111111 11122333333336667666656667777
Q ss_pred EEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceE
Q psy13635 144 SSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRA 223 (357)
Q Consensus 144 ~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~g 223 (357)
+.+++...+.+.... +........-|++.+.++.|-+++ ..+.|.+.++.+...+.+...--..-..
T Consensus 456 ~el~~ps~kel~~~~------------~~~~~~~I~~l~~SsdG~yiaa~~-t~g~I~v~nl~~~~~~~l~~rln~~vTa 522 (691)
T KOG2048|consen 456 FELETPSFKELKSIQ------------SQAKCPSISRLVVSSDGNYIAAIS-TRGQIFVYNLETLESHLLKVRLNIDVTA 522 (691)
T ss_pred EEecCcchhhhhccc------------cccCCCcceeEEEcCCCCEEEEEe-ccceEEEEEcccceeecchhccCcceee
Confidence 777665443332111 122334556778887788777776 4578999999987766555321123344
Q ss_pred EEEe-CCCCEEEEEeCCCCCCeEEEEecCCCceEEE-----------eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEE
Q psy13635 224 ITLS-PAHGYLFWSDWNEKRPKIERSLLNGGERVLL-----------VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 224 iavd-~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~-----------~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~ 291 (357)
.++. +..++|-+++.. ++++-.++...+.... ..+-.....|+.+|+.+...+|.- ..+-+..+
T Consensus 523 ~~~~~~~~~~lvvats~---nQv~efdi~~~~l~~ws~~nt~nlpk~~~~l~~~~~gisfd~~n~s~~~~~-~a~w~~~i 598 (691)
T KOG2048|consen 523 AAFSPFVRNRLVVATSN---NQVFEFDIEARNLTRWSKNNTRNLPKEPKTLIPGIPGISFDPKNSSRFIVY-DAHWSCLI 598 (691)
T ss_pred eeccccccCcEEEEecC---CeEEEEecchhhhhhhhhccccccccChhhcCCCCceEEeCCCCccEEEEE-cCcEEEEE
Confidence 5555 345678787776 4777777743322111 011123346899986665555553 45567777
Q ss_pred eCCC
Q psy13635 292 DFDG 295 (357)
Q Consensus 292 ~~dG 295 (357)
+.++
T Consensus 599 d~~~ 602 (691)
T KOG2048|consen 599 DFSL 602 (691)
T ss_pred ecCC
Confidence 7665
No 165
>KOG0292|consensus
Probab=90.23 E-value=26 Score=36.57 Aligned_cols=236 Identities=9% Similarity=0.041 Sum_probs=125.3
Q ss_pred EeecCCCCeEEEEEeCCc-EEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE
Q psy13635 34 ALSHHVAAQMLLFATSKD-IRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI 112 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 112 (357)
+++-++..|+++.+.... |+-.|-.=..=....-+.-+...|++|++ ++-||++...+-+|...+....- ....+
T Consensus 14 glsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rr---clftL 89 (1202)
T KOG0292|consen 14 GLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRR---CLFTL 89 (1202)
T ss_pred ceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecC-CCCeEEecCCccEEEEEecccce---ehhhh
Confidence 556688899998887544 44443210000011123445678999997 68899998888888888877653 23344
Q ss_pred eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE
Q psy13635 113 TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW 192 (357)
Q Consensus 113 ~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~ 192 (357)
...+.....+.+++.- --..+.++.++|...+......-.+.. +-. +....-.+.|. .-+.+
T Consensus 90 ~GHlDYVRt~~FHhey-PWIlSASDDQTIrIWNwqsr~~iavlt-GHn---------------HYVMcAqFhpt-EDlIV 151 (1202)
T KOG0292|consen 90 LGHLDYVRTVFFHHEY-PWILSASDDQTIRIWNWQSRKCIAVLT-GHN---------------HYVMCAQFHPT-EDLIV 151 (1202)
T ss_pred ccccceeEEeeccCCC-ceEEEccCCCeEEEEeccCCceEEEEe-cCc---------------eEEEeeccCCc-cceEE
Confidence 4556667777777422 222355667888888876655433321 100 11112222221 12333
Q ss_pred EeCCCCeEEEEEcCCCceEE-----------------------------EecCCCCCceEEEEeCCCCEEEEEeCCCCCC
Q psy13635 193 TDTGTDRIEVCRLEGTHRKV-----------------------------LVNTDLVEPRAITLSPAHGYLFWSDWNEKRP 243 (357)
Q Consensus 193 td~~~~~I~~~~~~g~~~~~-----------------------------~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~ 243 (357)
+-+-..+|.+-|..|-..+. ++.+.-...+-.|++|. --|+++-.....-
T Consensus 152 SaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpT-lpliVSG~DDRqV 230 (1202)
T KOG0292|consen 152 SASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPT-LPLIVSGADDRQV 230 (1202)
T ss_pred EecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCC-cceEEecCCccee
Confidence 44444455554444322111 11112223445666653 3455554443223
Q ss_pred eEEEEecCCCceEEE--eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 244 KIERSLLNGGERVLL--VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 244 ~I~~~~~dg~~~~~~--~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
++||.+- +...++ .....++..++-++ ..+.|..+......|+..|++.
T Consensus 231 KlWrmne--tKaWEvDtcrgH~nnVssvlfh-p~q~lIlSnsEDksirVwDm~k 281 (1202)
T KOG0292|consen 231 KLWRMNE--TKAWEVDTCRGHYNNVSSVLFH-PHQDLILSNSEDKSIRVWDMTK 281 (1202)
T ss_pred eEEEecc--ccceeehhhhcccCCcceEEec-CccceeEecCCCccEEEEeccc
Confidence 5555543 222222 22345566788887 4566777777777777777654
No 166
>smart00284 OLF Olfactomedin-like domains.
Probab=90.15 E-value=13 Score=33.06 Aligned_cols=147 Identities=14% Similarity=0.112 Sum_probs=79.9
Q ss_pred CCeEEEEeCCCCEEEEEEcCCCceE--EEEec-CCCCcceeeeeccCcccccCCceEEEeCCCC--eEEEEeCCCCeEEE
Q psy13635 128 TEKLYWTDSETNKLEVSSLDGKKRK--VLYWE-DIDQPRAIASYKLPTIEVEHPDGVAVDWVAR--NLYWTDTGTDRIEV 202 (357)
Q Consensus 128 ~~~ly~td~~~~~I~~~~~~g~~~~--~~~~~-~~~~p~~i~~~~~~~~~~~~p~glavD~~~~--~lY~td~~~~~I~~ 202 (357)
++.||+--..+..|.+.++...... ..++. +..+...- .-+...--++|+| .+| -||-+....+.|..
T Consensus 83 ngslYY~~~~s~~iiKydL~t~~v~~~~~Lp~a~y~~~~~Y------~~~~~sdiDlAvD-E~GLWvIYat~~~~g~ivv 155 (255)
T smart00284 83 NGSLYFNKFNSHDICRFDLTTETYQKEPLLNGAGYNNRFPY------AWGGFSDIDLAVD-ENGLWVIYATEQNAGKIVI 155 (255)
T ss_pred CceEEEEecCCccEEEEECCCCcEEEEEecCcccccccccc------ccCCCccEEEEEc-CCceEEEEeccCCCCCEEE
Confidence 6899998888899999999877653 22211 11100000 0011223478999 344 23555666677776
Q ss_pred EEcCCCceEE--EecCCCCC---ceEEEEeCCCCEEEEEeCCCC-CCeEE-EEecCCCceEEEeeCCCCC----ceEEEE
Q psy13635 203 CRLEGTHRKV--LVNTDLVE---PRAITLSPAHGYLFWSDWNEK-RPKIE-RSLLNGGERVLLVKDRLGW----PNGITL 271 (357)
Q Consensus 203 ~~~~g~~~~~--~~~~~~~~---P~giavd~~~g~Ly~~d~~~~-~~~I~-~~~~dg~~~~~~~~~~l~~----P~giai 271 (357)
..+|-....+ .-.....+ -++.-++ |.||.++.... ..+|. ..+...+.. ....-.+.. -..|..
T Consensus 156 SkLnp~tL~ve~tW~T~~~k~sa~naFmvC---GvLY~~~s~~~~~~~I~yayDt~t~~~-~~~~i~f~n~y~~~s~l~Y 231 (255)
T smart00284 156 SKLNPATLTIENTWITTYNKRSASNAFMIC---GILYVTRSLGSKGEKVFYAYDTNTGKE-GHLDIPFENMYEYISMLDY 231 (255)
T ss_pred EeeCcccceEEEEEEcCCCcccccccEEEe---eEEEEEccCCCCCcEEEEEEECCCCcc-ceeeeeeccccccceecee
Confidence 6666443332 22222222 2455566 89999986321 23444 344443322 222222233 345888
Q ss_pred ecCCCEEEEEeCCC
Q psy13635 272 DVDNEKLYWCDAKT 285 (357)
Q Consensus 272 d~~~~~lY~~d~~~ 285 (357)
+|.+++||.=|.+.
T Consensus 232 NP~d~~LY~wdng~ 245 (255)
T smart00284 232 NPNDRKLYAWNNGH 245 (255)
T ss_pred CCCCCeEEEEeCCe
Confidence 89999999887543
No 167
>KOG0650|consensus
Probab=90.09 E-value=0.78 Score=44.83 Aligned_cols=109 Identities=12% Similarity=0.077 Sum_probs=77.3
Q ss_pred EEEeecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 32 WYALSHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 32 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
..++.-++..|+|++++++.++.+|+....-...+.++......|++++.+++|+..... +++..++++=+. .....
T Consensus 569 vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d-~k~~WfDldlss--kPyk~ 645 (733)
T KOG0650|consen 569 VQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYD-KKMCWFDLDLSS--KPYKT 645 (733)
T ss_pred eeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCC-CeeEEEEcccCc--chhHH
Confidence 345556778899999999999999997754444456778888999999999999887654 567778887553 12333
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEE
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVS 144 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~ 144 (357)
+...-.....+|++. .=.||-+-+..+.+.++
T Consensus 646 lr~H~~avr~Va~H~-ryPLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 646 LRLHEKAVRSVAFHK-RYPLFASGSDDGTVIVF 677 (733)
T ss_pred hhhhhhhhhhhhhcc-ccceeeeecCCCcEEEE
Confidence 333344567788883 55677777666666654
No 168
>KOG0269|consensus
Probab=89.87 E-value=15 Score=37.38 Aligned_cols=138 Identities=7% Similarity=0.136 Sum_probs=92.5
Q ss_pred cEEEEEcCCC---CcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC
Q psy13635 51 DIRIANLSRP---LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 127 (357)
Q Consensus 51 ~i~~~~~~~~---~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~ 127 (357)
.|...|+... ......-+.-+...-++|+..+-.|.++...++.|...++.... ........-.+...+++.+.
T Consensus 111 ~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~---S~~t~~~nSESiRDV~fsp~ 187 (839)
T KOG0269|consen 111 VISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK---SKSTFRSNSESIRDVKFSPG 187 (839)
T ss_pred cEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccc---ccccccccchhhhceeeccC
Confidence 4566676552 11122234566788999999999999999999999999987664 12333335567899999999
Q ss_pred CCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC-eEEEEEcC
Q psy13635 128 TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD-RIEVCRLE 206 (357)
Q Consensus 128 ~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~-~I~~~~~~ 206 (357)
.++.|.+-.++|.++..++....+-..- -.-+.--.+.+||.-++-|.+..+.+ .|..=+++
T Consensus 188 ~~~~F~s~~dsG~lqlWDlRqp~r~~~k-----------------~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t 250 (839)
T KOG0269|consen 188 YGNKFASIHDSGYLQLWDLRQPDRCEKK-----------------LTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMT 250 (839)
T ss_pred CCceEEEecCCceEEEeeccCchhHHHH-----------------hhcccCceEEEeecCCCceeeecCCCccEEEEecc
Confidence 9999999999999999998654331110 00012235666766677777766654 55555666
Q ss_pred CC
Q psy13635 207 GT 208 (357)
Q Consensus 207 g~ 208 (357)
+.
T Consensus 251 ~~ 252 (839)
T KOG0269|consen 251 DS 252 (839)
T ss_pred CC
Confidence 43
No 169
>KOG0263|consensus
Probab=89.65 E-value=25 Score=35.64 Aligned_cols=189 Identities=10% Similarity=0.040 Sum_probs=110.9
Q ss_pred EEeecCCCCeEEEEEeC-CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCe---EEEEEcCCCCccee
Q psy13635 33 YALSHHVAAQMLLFATS-KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEM---ISCCTFDGNNVGSK 108 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~---I~~~~~~g~~~~~~ 108 (357)
|+..=+++..||+-.+. ..++.-.++.......-.......+.+.|.| .-.|++..+.++ ++..+-.- .
T Consensus 455 yg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P--~GyYFatas~D~tArLWs~d~~~-----P 527 (707)
T KOG0263|consen 455 YGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP--RGYYFATASHDQTARLWSTDHNK-----P 527 (707)
T ss_pred eeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecC--CceEEEecCCCceeeeeecccCC-----c
Confidence 45555666777776665 5677777765222222234455567788886 346666555443 33333322 2
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
..+....+.-...++|+|. .+.-.|.+...+++..+........++..-. .....+++.|.+.
T Consensus 528 lRifaghlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~----------------~~V~al~~Sp~Gr 590 (707)
T KOG0263|consen 528 LRIFAGHLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNSVRIFTGHK----------------GPVTALAFSPCGR 590 (707)
T ss_pred hhhhcccccccceEEECCc-ccccccCCCCceEEEEEcCCCcEEEEecCCC----------------CceEEEEEcCCCc
Confidence 4556666777788999974 4444566777888888866555555553221 2345677776443
Q ss_pred eEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 189 NLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
-..+....+.|..-|+.+........+.-.....|.++.. |.+.++....+ .|..-+
T Consensus 591 -~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~d-g~vLasgg~Dn--sV~lWD 647 (707)
T KOG0263|consen 591 -YLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRD-GNVLASGGADN--SVRLWD 647 (707)
T ss_pred -eEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecC-CCEEEecCCCC--eEEEEE
Confidence 3334455568888887764432222233556788899864 77777776644 554444
No 170
>KOG0645|consensus
Probab=89.26 E-value=16 Score=32.66 Aligned_cols=203 Identities=12% Similarity=0.069 Sum_probs=117.1
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc-CCceeEEEEcCCCeEEEEeCCCCEEEEE-EcC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-ITPDGLAIDWLTEKLYWTDSETNKLEVS-SLD 147 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~p~glavd~~~~~ly~td~~~~~I~~~-~~~ 147 (357)
....+.++++|..|.|+-+-..+..|+..+..+.......+++..+- ...+.+|..|.++.|- +-+-..++... +.+
T Consensus 14 ~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La-~aSFD~t~~Iw~k~~ 92 (312)
T KOG0645|consen 14 KDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLA-SASFDATVVIWKKED 92 (312)
T ss_pred CCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEE-EeeccceEEEeecCC
Confidence 34688999999778888888888888888888643233344554433 5688999987666443 33333444333 334
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEE--EEcCCCc-eEEEecCCCCCceEE
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEV--CRLEGTH-RKVLVNTDLVEPRAI 224 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~--~~~~g~~-~~~~~~~~~~~P~gi 224 (357)
+.+.-+-..++-+ +...++|.. ..|++..+......+.. ++-+++. ...++.+..+....+
T Consensus 93 ~efecv~~lEGHE---------------nEVK~Vaws-~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V 156 (312)
T KOG0645|consen 93 GEFECVATLEGHE---------------NEVKCVAWS-ASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHV 156 (312)
T ss_pred CceeEEeeeeccc---------------cceeEEEEc-CCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEE
Confidence 4444333323322 356778887 45566666666555554 4433443 234455566778899
Q ss_pred EEeCCCCEEEEEeCCCCCCeEEEEecCCCce-EEEeeCCCCCceEEEEecCCCEEEEEeC-CCCeEEE
Q psy13635 225 TLSPAHGYLFWSDWNEKRPKIERSLLNGGER-VLLVKDRLGWPNGITLDVDNEKLYWCDA-KTDKIEM 290 (357)
Q Consensus 225 avd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~-~~~~~~~l~~P~giaid~~~~~lY~~d~-~~~~I~~ 290 (357)
..+|..+.|+-+...+. -++++-..++.-. ...+...-...-++++|+.+.+|--++. .+-+|++
T Consensus 157 ~WHPt~dlL~S~SYDnT-Ik~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~ 223 (312)
T KOG0645|consen 157 IWHPTEDLLFSCSYDNT-IKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWR 223 (312)
T ss_pred EEcCCcceeEEeccCCe-EEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeee
Confidence 99997666665554432 4555554433222 1222222235568888866667654443 3445555
No 171
>smart00284 OLF Olfactomedin-like domains.
Probab=89.11 E-value=16 Score=32.55 Aligned_cols=140 Identities=13% Similarity=0.174 Sum_probs=78.9
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC-C----------cCCceeEEEEcCCCe--EEEEeCCCCEEEEEEcCC
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-G----------LITPDGLAIDWLTEK--LYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-~----------~~~p~glavd~~~~~--ly~td~~~~~I~~~~~~g 148 (357)
+|.||+.-..+..|.|.++...... .+..+.. + -.+-..+|+|. +|. ||-+..+.+.|....+|-
T Consensus 83 ngslYY~~~~s~~iiKydL~t~~v~-~~~~Lp~a~y~~~~~Y~~~~~sdiDlAvDE-~GLWvIYat~~~~g~ivvSkLnp 160 (255)
T smart00284 83 NGSLYFNKFNSHDICRFDLTTETYQ-KEPLLNGAGYNNRFPYAWGGFSDIDLAVDE-NGLWVIYATEQNAGKIVISKLNP 160 (255)
T ss_pred CceEEEEecCCccEEEEECCCCcEE-EEEecCccccccccccccCCCccEEEEEcC-CceEEEEeccCCCCCEEEEeeCc
Confidence 6999998888889999999987521 1222221 1 11235788883 332 344456668888777765
Q ss_pred CceEE--EEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC---CCeEE-EEEcCCCceEEE-e--cCCCC
Q psy13635 149 KKRKV--LYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG---TDRIE-VCRLEGTHRKVL-V--NTDLV 219 (357)
Q Consensus 149 ~~~~~--~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~---~~~I~-~~~~~g~~~~~~-~--~~~~~ 219 (357)
...++ .......++.+ -+...+ =|.||+++.. ..+|. ..|..+.....+ + .....
T Consensus 161 ~tL~ve~tW~T~~~k~sa-------------~naFmv---CGvLY~~~s~~~~~~~I~yayDt~t~~~~~~~i~f~n~y~ 224 (255)
T smart00284 161 ATLTIENTWITTYNKRSA-------------SNAFMI---CGILYVTRSLGSKGEKVFYAYDTNTGKEGHLDIPFENMYE 224 (255)
T ss_pred ccceEEEEEEcCCCcccc-------------cccEEE---eeEEEEEccCCCCCcEEEEEEECCCCccceeeeeeccccc
Confidence 44433 33233222111 122222 3689999853 22443 455554332211 1 11223
Q ss_pred CceEEEEeCCCCEEEEEeCC
Q psy13635 220 EPRAITLSPAHGYLFWSDWN 239 (357)
Q Consensus 220 ~P~giavd~~~g~Ly~~d~~ 239 (357)
.-..|..+|.++.||.=|.+
T Consensus 225 ~~s~l~YNP~d~~LY~wdng 244 (255)
T smart00284 225 YISMLDYNPNDRKLYAWNNG 244 (255)
T ss_pred cceeceeCCCCCeEEEEeCC
Confidence 34458899999999998876
No 172
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=88.79 E-value=5.5 Score=39.17 Aligned_cols=112 Identities=15% Similarity=0.153 Sum_probs=64.1
Q ss_pred cccccCCceEEEeCCCCeEEEEeCCCC----------------eEEEEEcCCC-------ceEEEecC------------
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTGTD----------------RIEVCRLEGT-------HRKVLVNT------------ 216 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~~~----------------~I~~~~~~g~-------~~~~~~~~------------ 216 (357)
...+..|+++++.+..+.+|++..++. .|.+.-+.+. .-..++..
T Consensus 413 AT~mdRpE~i~~~p~~g~Vy~~lTNn~~r~~~~aNpr~~n~~G~I~r~~p~~~d~t~~~ftWdlF~~aG~~~~~~~~~~~ 492 (616)
T COG3211 413 ATPMDRPEWIAVNPGTGEVYFTLTNNGKRSDDAANPRAKNGYGQIVRWIPATGDHTDTKFTWDLFVEAGNPSVLEGGASA 492 (616)
T ss_pred CccccCccceeecCCcceEEEEeCCCCccccccCCCcccccccceEEEecCCCCccCccceeeeeeecCCcccccccccc
Confidence 456679999999999999999976543 4666554432 11111110
Q ss_pred -----CCCCceEEEEeCCCCEEEEEeCCCC---CC---eEEEEecCCCce---EEEeeC-CCCCceEEEEecCCCEEEEE
Q psy13635 217 -----DLVEPRAITLSPAHGYLFWSDWNEK---RP---KIERSLLNGGER---VLLVKD-RLGWPNGITLDVDNEKLYWC 281 (357)
Q Consensus 217 -----~~~~P~giavd~~~g~Ly~~d~~~~---~~---~I~~~~~dg~~~---~~~~~~-~l~~P~giaid~~~~~lY~~ 281 (357)
.+..|.+|++|+. |+|+++.-+.. .. .+..+...+... ...+.. .-..-.|.++.++...+|+.
T Consensus 493 ~~~~~~f~~PDnl~fD~~-GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlFV~ 571 (616)
T COG3211 493 NINANWFNSPDNLAFDPW-GRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLFVN 571 (616)
T ss_pred CcccccccCCCceEECCC-CCEEEEecCCCCccCcccccccccccCCCccceeeeeccCCCcceeecceeCCCCceEEEE
Confidence 1445999999986 89988875533 11 111111111111 111111 11344577887777777776
Q ss_pred eCC
Q psy13635 282 DAK 284 (357)
Q Consensus 282 d~~ 284 (357)
-+.
T Consensus 572 vQH 574 (616)
T COG3211 572 VQH 574 (616)
T ss_pred ecC
Confidence 543
No 173
>KOG0303|consensus
Probab=88.51 E-value=22 Score=33.43 Aligned_cols=162 Identities=14% Similarity=0.201 Sum_probs=88.6
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 128 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~ 128 (357)
.+.|..-++.++ ...+..........+.|.. +|.++.+-..+.+|+.++......+ .+.....|...+..+-+- +
T Consensus 153 Dn~v~iWnv~tg-eali~l~hpd~i~S~sfn~-dGs~l~TtckDKkvRv~dpr~~~~v-~e~~~heG~k~~Raifl~--~ 227 (472)
T KOG0303|consen 153 DNTVSIWNVGTG-EALITLDHPDMVYSMSFNR-DGSLLCTTCKDKKVRVIDPRRGTVV-SEGVAHEGAKPARAIFLA--S 227 (472)
T ss_pred CceEEEEeccCC-ceeeecCCCCeEEEEEecc-CCceeeeecccceeEEEcCCCCcEe-eecccccCCCcceeEEec--c
Confidence 455777777653 3334444666788999987 5667778888889998888765422 112344555555544443 3
Q ss_pred CeEEEEeCCCCEEEEEEcCCCceEEEE--ecCCCCcceeeeeccCcccccCCceEEE---eCCCCeEEEEeCCCCeEEEE
Q psy13635 129 EKLYWTDSETNKLEVSSLDGKKRKVLY--WEDIDQPRAIASYKLPTIEVEHPDGVAV---DWVARNLYWTDTGTDRIEVC 203 (357)
Q Consensus 129 ~~ly~td~~~~~I~~~~~~g~~~~~~~--~~~~~~p~~i~~~~~~~~~~~~p~glav---D~~~~~lY~td~~~~~I~~~ 203 (357)
+.++-|-...- +.++..+ ...+.+|-+ ...+..-+|+-+ |+.++.||.+..+.+.|.-+
T Consensus 228 g~i~tTGfsr~---------seRq~aLwdp~nl~eP~~-------~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYy 291 (472)
T KOG0303|consen 228 GKIFTTGFSRM---------SERQIALWDPNNLEEPIA-------LQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYF 291 (472)
T ss_pred Cceeeeccccc---------cccceeccCcccccCcce-------eEEeccCCceEEeeecCCCCEEEEEecCCcceEEE
Confidence 44444332211 1111111 122333311 123344555543 88899999999998888877
Q ss_pred EcCCCc--eEEEecC-CCCCceEEEEeCCCC
Q psy13635 204 RLEGTH--RKVLVNT-DLVEPRAITLSPAHG 231 (357)
Q Consensus 204 ~~~g~~--~~~~~~~-~~~~P~giavd~~~g 231 (357)
...... ...+-.- ..+--+|+++-|.+|
T Consensus 292 Eit~d~P~~hyln~f~S~epQRG~g~mPKRG 322 (472)
T KOG0303|consen 292 EITNEPPFVHYLNTFSSKEPQRGMGFMPKRG 322 (472)
T ss_pred EecCCCceeEEecccccCCcccccccccccc
Confidence 665544 2222211 122235777776544
No 174
>KOG2106|consensus
Probab=88.35 E-value=26 Score=34.06 Aligned_cols=164 Identities=13% Similarity=0.088 Sum_probs=90.9
Q ss_pred cccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
++++..|.-++= ..+-||+-... +.|..=++.+....++.. ....-.|+|..|. ..+|.|......-+++. +
T Consensus 326 Pe~~G~iRtv~e--~~~di~vGTtr-N~iL~Gt~~~~f~~~v~g-h~delwgla~hps-~~q~~T~gqdk~v~lW~---~ 397 (626)
T KOG2106|consen 326 PEQFGPIRTVAE--GKGDILVGTTR-NFILQGTLENGFTLTVQG-HGDELWGLATHPS-KNQLLTCGQDKHVRLWN---D 397 (626)
T ss_pred chhcCCeeEEec--CCCcEEEeecc-ceEEEeeecCCceEEEEe-cccceeeEEcCCC-hhheeeccCcceEEEcc---C
Confidence 445555555443 34457765554 567666666554433332 2347889999986 56666665432123333 1
Q ss_pred CCceE-EEeeCC----CCCce-EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEE--EEEe
Q psy13635 252 GGERV-LLVKDR----LGWPN-GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYV--YWTD 323 (357)
Q Consensus 252 g~~~~-~~~~~~----l~~P~-giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~l--y~td 323 (357)
-.-.. .++... --.|. -+|+...+|+.++-|..+.....+..++.....+-...-..-.++.-.++.| |-.+
T Consensus 398 ~k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs 477 (626)
T KOG2106|consen 398 HKLEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVS 477 (626)
T ss_pred CceeEEEEecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEEC
Confidence 11111 111110 12343 3556667888888888887777777776655554443333334444445655 4566
Q ss_pred CCCCeEEEEeCccCceeEEE
Q psy13635 324 WQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 324 ~~~~~I~~~~~~~g~~~~~i 343 (357)
...+...++.+.+|+..+.+
T Consensus 478 ~~g~~y~r~~k~~gs~ithL 497 (626)
T KOG2106|consen 478 ANGRKYSRVGKCSGSPITHL 497 (626)
T ss_pred CCCcEEEEeeeecCceeEEe
Confidence 66666778888778655543
No 175
>KOG0289|consensus
Probab=88.16 E-value=24 Score=33.53 Aligned_cols=203 Identities=9% Similarity=0.079 Sum_probs=117.0
Q ss_pred CcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC--cCCceeEEEEcCCCeEEEEeCCC
Q psy13635 61 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG--LITPDGLAIDWLTEKLYWTDSET 138 (357)
Q Consensus 61 ~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~--~~~p~glavd~~~~~ly~td~~~ 138 (357)
.........-....++..++.++.+.|++....-.+.---+|.. ..+.... -..-...+++| .+.||-+-..+
T Consensus 294 s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~----lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d 368 (506)
T KOG0289|consen 294 SEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQ----LTVVSDETSDVEYTSAAFHP-DGLIFGTGTPD 368 (506)
T ss_pred cCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcE----EEEEeeccccceeEEeeEcC-CceEEeccCCC
Confidence 34444445555678899999999999987765444443344442 3333332 12356788885 78999999989
Q ss_pred CEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCC-CceEEEecCC
Q psy13635 139 NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEG-THRKVLVNTD 217 (357)
Q Consensus 139 ~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g-~~~~~~~~~~ 217 (357)
+.+...++.......-++. --.....|++. .+|+-.++....+.|..-|+.- ++...+....
T Consensus 369 ~~vkiwdlks~~~~a~Fpg----------------ht~~vk~i~Fs-ENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~ 431 (506)
T KOG0289|consen 369 GVVKIWDLKSQTNVAKFPG----------------HTGPVKAISFS-ENGYWLATAADDGSVKLWDLRKLKNFKTIQLDE 431 (506)
T ss_pred ceEEEEEcCCccccccCCC----------------CCCceeEEEec-cCceEEEEEecCCeEEEEEehhhcccceeeccc
Confidence 9999888865542221111 11234567776 5666666666666677777663 2333443334
Q ss_pred CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee--CCCCCceEEEEecCCCEEEEEeCCCCeEEE
Q psy13635 218 LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK--DRLGWPNGITLDVDNEKLYWCDAKTDKIEM 290 (357)
Q Consensus 218 ~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~--~~l~~P~giaid~~~~~lY~~d~~~~~I~~ 290 (357)
......+.+|..+.+|-.. +.. -+|+.+.....+=+.+.. ......+|+.+. +..-|.++...+++.+
T Consensus 432 ~~~v~s~~fD~SGt~L~~~--g~~-l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg--~~aq~l~s~smd~~l~ 501 (506)
T KOG0289|consen 432 KKEVNSLSFDQSGTYLGIA--GSD-LQVYICKKKTKSWTEIKELADHSGLSTGVRFG--EHAQYLASTSMDAILR 501 (506)
T ss_pred cccceeEEEcCCCCeEEee--cce-eEEEEEecccccceeeehhhhcccccceeeec--ccceEEeeccchhheE
Confidence 4467889999765555444 321 355555533322222221 222345677763 5556777766665543
No 176
>KOG0319|consensus
Probab=88.16 E-value=32 Score=34.91 Aligned_cols=236 Identities=9% Similarity=-0.003 Sum_probs=125.9
Q ss_pred CCCCeEEEEEeCCcEEEEEcCCCCc-ceE-eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC
Q psy13635 38 HVAAQMLLFATSKDIRIANLSRPLK-PVT-IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 38 ~~~~~~l~~~~~~~i~~~~~~~~~~-~~~-~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
+....+|+.+..+.|-.+|+..+.. ... ..+......++++++++..||.+-. +..+...++..+........+..
T Consensus 28 s~nG~~L~t~~~d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~r-s~llrv~~L~tgk~irswKa~He- 105 (775)
T KOG0319|consen 28 SSNGQHLYTACGDRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASR-SQLLRVWSLPTGKLIRSWKAIHE- 105 (775)
T ss_pred CCCCCEEEEecCceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeec-cceEEEEEcccchHhHhHhhccC-
Confidence 4445567777777788899876432 111 1234456788999998888776643 45666667765532111112122
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC-eEEEEe
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR-NLYWTD 194 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~-~lY~td 194 (357)
.-...+++|+ ++.|.-+-...+++.+.++.+.+...-+.. . |. -...+.+.+.-. .+..+.
T Consensus 106 -~Pvi~ma~~~-~g~LlAtggaD~~v~VWdi~~~~~th~fkG-~--gG-------------vVssl~F~~~~~~~lL~sg 167 (775)
T KOG0319|consen 106 -APVITMAFDP-TGTLLATGGADGRVKVWDIKNGYCTHSFKG-H--GG-------------VVSSLLFHPHWNRWLLASG 167 (775)
T ss_pred -CCeEEEEEcC-CCceEEeccccceEEEEEeeCCEEEEEecC-C--Cc-------------eEEEEEeCCccchhheeec
Confidence 2236789997 457777777889999999998877554321 1 10 112233322221 333455
Q ss_pred CCCCeEEEEEcCCCce-EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEec
Q psy13635 195 TGTDRIEVCRLEGTHR-KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDV 273 (357)
Q Consensus 195 ~~~~~I~~~~~~g~~~-~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~ 273 (357)
...+.+...++..... -...........+|++.+....+.-.-.. ..|..-++..-....++. -...-.+.++-.
T Consensus 168 ~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RD---kvi~vwd~~~~~~l~~lp-~ye~~E~vv~l~ 243 (775)
T KOG0319|consen 168 ATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRD---KVIIVWDLVQYKKLKTLP-LYESLESVVRLR 243 (775)
T ss_pred CCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccC---cEEEEeehhhhhhhheec-hhhheeeEEEec
Confidence 5556788888773322 11222345677889988764334333322 244444442111111111 011112222211
Q ss_pred C--C--CEEEEEeCCCCeEEEEeCCCCC
Q psy13635 274 D--N--EKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 274 ~--~--~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
. + +..+.+-.+.+.+...+..|..
T Consensus 244 ~~~~~~~~~~~TaG~~g~~~~~d~es~~ 271 (775)
T KOG0319|consen 244 EELGGKGEYIITAGGSGVVQYWDSESGK 271 (775)
T ss_pred hhcCCcceEEEEecCCceEEEEecccch
Confidence 1 1 3456666677788888876653
No 177
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=87.97 E-value=24 Score=33.21 Aligned_cols=103 Identities=9% Similarity=0.013 Sum_probs=57.1
Q ss_pred CCeEEEEeCCCCeEEEEEc-CCCceEEEecCC-CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC-CCceEEEeeC--
Q psy13635 187 ARNLYWTDTGTDRIEVCRL-EGTHRKVLVNTD-LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-GGERVLLVKD-- 261 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~-~g~~~~~~~~~~-~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-g~~~~~~~~~-- 261 (357)
.|+||+.+... .++..+. +|...-...... ........+ .++.+|+.... +++..++.+ |......-..
T Consensus 111 ~G~i~~g~~~g-~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~--~~~~v~~~s~~---g~~~al~~~tG~~~W~~~~~~~ 184 (370)
T COG1520 111 DGKIYVGSWDG-KLYALDASTGTLVWSRNVGGSPYYASPPVV--GDGTVYVGTDD---GHLYALNADTGTLKWTYETPAP 184 (370)
T ss_pred CCeEEEecccc-eEEEEECCCCcEEEEEecCCCeEEecCcEE--cCcEEEEecCC---CeEEEEEccCCcEEEEEecCCc
Confidence 67899888764 7888888 676543332222 011111222 25778877522 478888877 5544332111
Q ss_pred -CCCCceEEEEecCCCEEEEEeCC-CCeEEEEeC-CCCC
Q psy13635 262 -RLGWPNGITLDVDNEKLYWCDAK-TDKIEMIDF-DGNN 297 (357)
Q Consensus 262 -~l~~P~giaid~~~~~lY~~d~~-~~~I~~~~~-dG~~ 297 (357)
........++ .++.+|+.... ...++..+. +|+.
T Consensus 185 ~~~~~~~~~~~--~~~~vy~~~~~~~~~~~a~~~~~G~~ 221 (370)
T COG1520 185 LSLSIYGSPAI--ASGTVYVGSDGYDGILYALNAEDGTL 221 (370)
T ss_pred cccccccCcee--ecceEEEecCCCcceEEEEEccCCcE
Confidence 2222222223 57888888664 446777777 5653
No 178
>KOG4441|consensus
Probab=87.64 E-value=33 Score=34.53 Aligned_cols=196 Identities=14% Similarity=0.118 Sum_probs=112.3
Q ss_pred ceeEEEEcCCCeEEEEeCCC------CEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE
Q psy13635 119 PDGLAIDWLTEKLYWTDSET------NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW 192 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~------~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~ 192 (357)
-.|+++- ++.||++-..+ +.+.++++....=..+ ..+..+| .+.++-..+|.||+
T Consensus 325 ~~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~--a~M~~~R---------------~~~~v~~l~g~iYa 385 (571)
T KOG4441|consen 325 RVGVAVL--NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPV--APMNTKR---------------SDFGVAVLDGKLYA 385 (571)
T ss_pred cccEEEE--CCEEEEEccccCCCcccceEEEecCCCCceecc--CCccCcc---------------ccceeEEECCEEEE
Confidence 3455554 78999987544 4677777665431111 1122222 12333346899998
Q ss_pred EeCCCC-----eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC----CCeEEEEecCCCceEEEeeCCC
Q psy13635 193 TDTGTD-----RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK----RPKIERSLLNGGERVLLVKDRL 263 (357)
Q Consensus 193 td~~~~-----~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~----~~~I~~~~~dg~~~~~~~~~~l 263 (357)
.....+ .+++.++....=..+..-. ..-.+.++-..+|+||.+-.... ...+++.++....=+.+ ..+
T Consensus 386 vGG~dg~~~l~svE~YDp~~~~W~~va~m~-~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~--~~M 462 (571)
T KOG4441|consen 386 VGGFDGEKSLNSVECYDPVTNKWTPVAPML-TRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLI--APM 462 (571)
T ss_pred EeccccccccccEEEecCCCCcccccCCCC-cceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeec--CCc
Confidence 866543 6899988876544443211 12334444445799999965322 24677777764433222 122
Q ss_pred CCc---eEEEEecCCCEEEEEeCCC-----CeEEEEeCCCCCeEEEecC-CCCceEEEEEECCEEEEEeCCC-----CeE
Q psy13635 264 GWP---NGITLDVDNEKLYWCDAKT-----DKIEMIDFDGNNRRELINE-NLPHVFGISLLGDYVYWTDWQR-----RSI 329 (357)
Q Consensus 264 ~~P---~giaid~~~~~lY~~d~~~-----~~I~~~~~dG~~~~~i~~~-~~~~p~gia~~~~~ly~td~~~-----~~I 329 (357)
..+ .|+++ .+++||+.-... ..|.++++....-..+..- .-....|+++.++.+|+.--.. +.|
T Consensus 463 ~~~R~~~g~a~--~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~v 540 (571)
T KOG4441|consen 463 NTRRSGFGVAV--LNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVLGGKLYAVGGFDGNNNLNTV 540 (571)
T ss_pred ccccccceEEE--ECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEECCEEEEEecccCcccccee
Confidence 222 45665 689999875422 3488888887765544221 1223467888999999976422 445
Q ss_pred EEEeCccCc
Q psy13635 330 DRVNKITGN 338 (357)
Q Consensus 330 ~~~~~~~g~ 338 (357)
...++.+++
T Consensus 541 e~ydp~~d~ 549 (571)
T KOG4441|consen 541 ECYDPETDT 549 (571)
T ss_pred EEcCCCCCc
Confidence 566654433
No 179
>KOG4328|consensus
Probab=87.36 E-value=28 Score=33.32 Aligned_cols=201 Identities=11% Similarity=0.102 Sum_probs=106.4
Q ss_pred CcCCceeEEEEcCCC-eEEEEeCCCCEEEEEEcCCCc--e-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 115 GLITPDGLAIDWLTE-KLYWTDSETNKLEVSSLDGKK--R-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 115 ~~~~p~glavd~~~~-~ly~td~~~~~I~~~~~~g~~--~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
--.....+++.|... ++..+-.-.|+|...++++.. . .+.....-. ....+|.+-|.+-.-
T Consensus 185 ~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs---------------~~Vs~l~F~P~n~s~ 249 (498)
T KOG4328|consen 185 TDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHS---------------GPVSGLKFSPANTSQ 249 (498)
T ss_pred cccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCC---------------ccccceEecCCChhh
Confidence 334667889998777 666666667899999986322 1 222111100 023344444433333
Q ss_pred EEEeCCCCeEEEEEcCCCceEEEecC--CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceE
Q psy13635 191 YWTDTGTDRIEVCRLEGTHRKVLVNT--DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNG 268 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~~~~~~~--~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~g 268 (357)
+.+-...+.|...++.+...+.+... .-..-.++.+...++.+|+.+.-+ +..+.-.+.+|+....+.... ....+
T Consensus 250 i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G-~f~~iD~R~~~s~~~~~~lh~-kKI~s 327 (498)
T KOG4328|consen 250 IYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG-NFNVIDLRTDGSEYENLRLHK-KKITS 327 (498)
T ss_pred eeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeeccc-ceEEEEeecCCccchhhhhhh-cccce
Confidence 33334445555555554443333332 222345566666677777777654 256766777777554443222 26788
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEeCC--CCCeEEEecCCCC--ceEEEEEE---CCEEEEEeCCCCeEEEEeC
Q psy13635 269 ITLDVDNEKLYWCDAKTDKIEMIDFD--GNNRRELINENLP--HVFGISLL---GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 269 iaid~~~~~lY~~d~~~~~I~~~~~d--G~~~~~i~~~~~~--~p~gia~~---~~~ly~td~~~~~I~~~~~ 334 (357)
+++.|....++.+-.-.+.....|+. +.....++. .+. ++..-|.+ +|.|.-|+ ..+.|+.++.
T Consensus 328 v~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~ls-t~~HrrsV~sAyFSPs~gtl~TT~-~D~~IRv~ds 398 (498)
T KOG4328|consen 328 VALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLS-TLPHRRSVNSAYFSPSGGTLLTTC-QDNEIRVFDS 398 (498)
T ss_pred eecCCCCchheeecccCcceeeeehhhhcCCCCccee-cccccceeeeeEEcCCCCceEeec-cCCceEEeec
Confidence 99988777777666544444344432 222211332 233 34443444 47755554 4467777765
No 180
>KOG2139|consensus
Probab=87.28 E-value=25 Score=32.71 Aligned_cols=233 Identities=14% Similarity=0.074 Sum_probs=124.4
Q ss_pred EEccCCEEEEEeCCCCeEEEE-EcCCCCcceeEEEE-eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEE
Q psy13635 78 YYYKKSMVCWTDHGTEMISCC-TFDGNNVGSKHNVI-TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLY 155 (357)
Q Consensus 78 ~d~~~~~ly~~d~~~~~I~~~-~~~g~~~~~~~~~~-~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~ 155 (357)
+....+-.+|++......-|. .+-++. .-.++ ..+-.-...++....+..+--+..++..|...+.+......+.
T Consensus 158 vgCr~gIciW~~s~tln~~r~~~~~s~~---~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~ 234 (445)
T KOG2139|consen 158 VGCRAGICIWSDSRTLNANRNIRMMSTH---HLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI 234 (445)
T ss_pred eeecceeEEEEcCccccccccccccccc---chhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc
Confidence 334456667776654332221 111221 12222 2333345667777554444444556777888787765544443
Q ss_pred ecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC-eEEEEEcC-CCceEEEecCCCCCceEEEEeCCCCEE
Q psy13635 156 WEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD-RIEVCRLE-GTHRKVLVNTDLVEPRAITLSPAHGYL 233 (357)
Q Consensus 156 ~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~-~I~~~~~~-g~~~~~~~~~~~~~P~giavd~~~g~L 233 (357)
..+ +.+..-|-..|.+..||.+..... ++...+.. .+.+-++.. ....+-.-+|.+.+|
T Consensus 235 ~~g----------------lgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgs---grvqtacWspcGsfL 295 (445)
T KOG2139|consen 235 PKG----------------LGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGS---GRVQTACWSPCGSFL 295 (445)
T ss_pred ccC----------------CCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccC---CceeeeeecCCCCEE
Confidence 222 122223445555666665543221 22211111 122222222 144555667887888
Q ss_pred EEEeCCCCCCeEEEEecCCCceE----------EEeeC--------C----CCCceEEEEecCCCEEEEEeCCCCeEEEE
Q psy13635 234 FWSDWNEKRPKIERSLLNGGERV----------LLVKD--------R----LGWPNGITLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 234 y~~d~~~~~~~I~~~~~dg~~~~----------~~~~~--------~----l~~P~giaid~~~~~lY~~d~~~~~I~~~ 291 (357)
.++-.+. ..+++...++.... .++.+ + -..+..||.|+.+.+|-++-.+...|..+
T Consensus 296 Lf~~sgs--p~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~ 373 (445)
T KOG2139|consen 296 LFACSGS--PRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLC 373 (445)
T ss_pred EEEEcCC--ceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhh
Confidence 8888885 59999988764221 11111 1 24578999999999998887666544333
Q ss_pred -------eCCCCCeEEEec---CCCCceEEEEEE----CCEEEEEeCCCCeEEEEeC
Q psy13635 292 -------DFDGNNRRELIN---ENLPHVFGISLL----GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 292 -------~~dG~~~~~i~~---~~~~~p~gia~~----~~~ly~td~~~~~I~~~~~ 334 (357)
+..-+...++.. .+..+|.-|++. ++.+...-|.+|++.++..
T Consensus 374 k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl 430 (445)
T KOG2139|consen 374 KLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPL 430 (445)
T ss_pred hhhhhhhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeee
Confidence 222222222221 134567777763 5778888888899887765
No 181
>KOG1539|consensus
Probab=87.23 E-value=39 Score=34.88 Aligned_cols=121 Identities=10% Similarity=0.077 Sum_probs=71.0
Q ss_pred EEEEeceeEEEEEEEEEEEEEeecCCCCeEE---EEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEe
Q psy13635 14 MFITNTKWVNYIFLVVHFWYALSHHVAAQML---LFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTD 89 (357)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d 89 (357)
|.+.|=++-+.|.-+-.++..++...+.|.| .+.. ..+|...++-..+.....-.+-+....+.|..++..+..+.
T Consensus 184 lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~ 263 (910)
T KOG1539|consen 184 LQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASG 263 (910)
T ss_pred EEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEec
Confidence 4466666666666665555555555555533 2222 44677777755444444444457788899988788888887
Q ss_pred CCCCeEEEEEcCCCCcceeEEEEe-CCcCCceeEEEEcCCCeEEEEeCCC
Q psy13635 90 HGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSET 138 (357)
Q Consensus 90 ~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~p~glavd~~~~~ly~td~~~ 138 (357)
...|.+.-.++++... ..++. ....++.+..+-+ +.-+.++....
T Consensus 264 ~~~G~m~~wDLe~kkl---~~v~~nah~~sv~~~~fl~-~epVl~ta~~D 309 (910)
T KOG1539|consen 264 RSNGDMAFWDLEKKKL---INVTRNAHYGSVTGATFLP-GEPVLVTAGAD 309 (910)
T ss_pred cCCceEEEEEcCCCee---eeeeeccccCCcccceecC-CCceEeeccCC
Confidence 7778888888887741 22222 2234555655543 44454544433
No 182
>KOG2111|consensus
Probab=87.19 E-value=23 Score=32.26 Aligned_cols=146 Identities=12% Similarity=0.076 Sum_probs=86.7
Q ss_pred CeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEE-EeCCCCEEEEEeCCCCCCeEEEEecCCCce--EEEeeCCCC
Q psy13635 188 RNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAIT-LSPAHGYLFWSDWNEKRPKIERSLLNGGER--VLLVKDRLG 264 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~gia-vd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~--~~~~~~~l~ 264 (357)
++|-+... ++|++..........-.-+...+|.|+. ++|....-+.+-.+.+.++|...++..... ..++.....
T Consensus 105 ~riVvvl~--~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s 182 (346)
T KOG2111|consen 105 DRIVVVLE--NKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDS 182 (346)
T ss_pred CeEEEEec--CeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccC
Confidence 34444443 3555555443222222223456688764 566666777777665568899888876655 355555556
Q ss_pred CceEEEEecCCCEEEEEeCCCCeEEEE-e-CCCCCeEEEecC-CCCceEEEEEECCE-EEEEeCCCCeEEEEeCcc
Q psy13635 265 WPNGITLDVDNEKLYWCDAKTDKIEMI-D-FDGNNRRELINE-NLPHVFGISLLGDY-VYWTDWQRRSIDRVNKIT 336 (357)
Q Consensus 265 ~P~giaid~~~~~lY~~d~~~~~I~~~-~-~dG~~~~~i~~~-~~~~p~gia~~~~~-ly~td~~~~~I~~~~~~~ 336 (357)
.-..+++. ..|.+.-+-+..|.+.|+ + .+|+...++--+ +-.+.+.|++..+. ...+.+..|+|..+...+
T Consensus 183 ~Iacv~Ln-~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 183 DIACVALN-LQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred ceeEEEEc-CCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 66788887 567777777777766555 4 366666555321 12245677776433 333445678888877643
No 183
>KOG1274|consensus
Probab=87.09 E-value=41 Score=35.02 Aligned_cols=198 Identities=11% Similarity=0.087 Sum_probs=115.2
Q ss_pred EEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceE
Q psy13635 73 GAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK 152 (357)
Q Consensus 73 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~ 152 (357)
-..|.||+.++.|+..+. ++.|+....+... +....+...-....+++.+ + +.|.+.+..+.|.++..+.....
T Consensus 16 ~t~i~~d~~gefi~tcgs-dg~ir~~~~~sd~--e~P~ti~~~g~~v~~ia~~--s-~~f~~~s~~~tv~~y~fps~~~~ 89 (933)
T KOG1274|consen 16 LTLICYDPDGEFICTCGS-DGDIRKWKTNSDE--EEPETIDISGELVSSIACY--S-NHFLTGSEQNTVLRYKFPSGEED 89 (933)
T ss_pred eEEEEEcCCCCEEEEecC-CCceEEeecCCcc--cCCchhhccCceeEEEeec--c-cceEEeeccceEEEeeCCCCCcc
Confidence 567889988887776654 3556665554441 1122222122334566665 2 36667777889999988765544
Q ss_pred EEEecCCCCcceeeeeccCccccc-CCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCC
Q psy13635 153 VLYWEDIDQPRAIASYKLPTIEVE-HPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHG 231 (357)
Q Consensus 153 ~~~~~~~~~p~~i~~~~~~~~~~~-~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g 231 (357)
.++. .|. ..+.++|+ .+|....+....-.|-..+++....+....+.-....+|.++|.+.
T Consensus 90 ~iL~-----------------Rftlp~r~~~v~-g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~ 151 (933)
T KOG1274|consen 90 TILA-----------------RFTLPIRDLAVS-GSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGN 151 (933)
T ss_pred ceee-----------------eeeccceEEEEe-cCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCC
Confidence 3321 111 34677888 5556655555555777777776555444443444557899999876
Q ss_pred EEEEEeCCCCCCeEEEEecCCCceEEEeeC-------CCCCc-eEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe
Q psy13635 232 YLFWSDWNEKRPKIERSLLNGGERVLLVKD-------RLGWP-NGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR 298 (357)
Q Consensus 232 ~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-------~l~~P-~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~ 298 (357)
.|-++... +.+...+++.......+.. ....+ .-++..|.+|.+-+.-. .+.|..++.+|-..
T Consensus 152 fLAvss~d---G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~-d~~Vkvy~r~~we~ 222 (933)
T KOG1274|consen 152 FLAVSSCD---GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPV-DNTVKVYSRKGWEL 222 (933)
T ss_pred EEEEEecC---ceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeecc-CCeEEEEccCCcee
Confidence 67666655 5788777764322221110 11222 33566667677665543 46788888776443
No 184
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=87.01 E-value=35 Score=34.04 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=34.8
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC---CcC-------CceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCc
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN---GLI-------TPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKK 150 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~---~~~-------~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~ 150 (357)
++.||+++.. +.|+.++..... ...+.-.. ... ...++++. +++||+... .+++..++.. |+.
T Consensus 69 ~g~vyv~s~~-g~v~AlDa~TGk--~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~~v~v~t~-dg~l~ALDa~TGk~ 142 (527)
T TIGR03075 69 DGVMYVTTSY-SRVYALDAKTGK--ELWKYDPKLPDDVIPVMCCDVVNRGVALY--DGKVFFGTL-DARLVALDAKTGKV 142 (527)
T ss_pred CCEEEEECCC-CcEEEEECCCCc--eeeEecCCCCcccccccccccccccceEE--CCEEEEEcC-CCEEEEEECCCCCE
Confidence 6788887654 467777766442 11111110 010 12456776 678888764 4678887764 443
No 185
>KOG0310|consensus
Probab=86.62 E-value=31 Score=33.15 Aligned_cols=205 Identities=8% Similarity=0.039 Sum_probs=116.0
Q ss_pred cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCe
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEK 130 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ 130 (357)
.++.+|...-.-....-+.....+-+-|.+.++.++.+...+..+...++++.. .+..+...-......++.+.++.
T Consensus 91 ~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~---v~~~l~~htDYVR~g~~~~~~~h 167 (487)
T KOG0310|consen 91 HVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY---VQAELSGHTDYVRCGDISPANDH 167 (487)
T ss_pred cEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE---EEEEecCCcceeEeeccccCCCe
Confidence 477788422011222223444566778888889999887777777777887764 23334444456788899999999
Q ss_pred EEEEeCCCCEEEEEEcCCCceEEE-EecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC-CC
Q psy13635 131 LYWTDSETNKLEVSSLDGKKRKVL-YWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE-GT 208 (357)
Q Consensus 131 ly~td~~~~~I~~~~~~g~~~~~~-~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~-g~ 208 (357)
+.+|-+-.+.|...++......+. +..+ .|-.-.+--..|.++.+..+ +.|.+-|+- |.
T Consensus 168 ivvtGsYDg~vrl~DtR~~~~~v~elnhg------------------~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~ 228 (487)
T KOG0310|consen 168 IVVTGSYDGKVRLWDTRSLTSRVVELNHG------------------CPVESVLALPSGSLIASAGG-NSVKVWDLTTGG 228 (487)
T ss_pred EEEecCCCceEEEEEeccCCceeEEecCC------------------CceeeEEEcCCCCEEEEcCC-CeEEEEEecCCc
Confidence 999999999999888765532222 1111 11111111123455544443 567777776 33
Q ss_pred ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCc-eEEEEecCCCEEEEEe
Q psy13635 209 HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWP-NGITLDVDNEKLYWCD 282 (357)
Q Consensus 209 ~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P-~giaid~~~~~lY~~d 282 (357)
.........-+....+.+...+.+|+-+--. +++..++. ++..++..-....| -.+++.+.+..+++--
T Consensus 229 qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD---~~VKVfd~--t~~Kvv~s~~~~~pvLsiavs~dd~t~viGm 298 (487)
T KOG0310|consen 229 QLLTSMFNHNKTVTCLRLASDSTRLLSGSLD---RHVKVFDT--TNYKVVHSWKYPGPVLSIAVSPDDQTVVIGM 298 (487)
T ss_pred eehhhhhcccceEEEEEeecCCceEeecccc---cceEEEEc--cceEEEEeeecccceeeEEecCCCceEEEec
Confidence 2222222233456677777655566655444 24444442 23344433334444 4678876666666544
No 186
>PTZ00420 coronin; Provisional
Probab=86.54 E-value=38 Score=34.05 Aligned_cols=206 Identities=10% Similarity=0.020 Sum_probs=108.9
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc--eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK--RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~--~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
-.....+++.+..+.+..+-+..+.|...++.... ...+ ..|... + ..--.....+++.|.+..++.+
T Consensus 74 ~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i-----~~p~~~-L----~gH~~~V~sVaf~P~g~~iLaS 143 (568)
T PTZ00420 74 TSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEI-----KDPQCI-L----KGHKKKISIIDWNPMNYYIMCS 143 (568)
T ss_pred CCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccccc-----ccceEE-e----ecCCCcEEEEEECCCCCeEEEE
Confidence 34577888887666777888888999988875321 1100 000000 0 0111245678888877777777
Q ss_pred eCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceE--EEE
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNG--ITL 271 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~g--iai 271 (357)
-...+.|...++........+. .......+++++. |.++.+.... +.|...++.......-+...-..... +.+
T Consensus 144 gS~DgtIrIWDl~tg~~~~~i~-~~~~V~Slswspd-G~lLat~s~D--~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~ 219 (568)
T PTZ00420 144 SGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIK-GNLLSGTCVG--KHMHIIDPRKQEIASSFHIHDGGKNTKNIWI 219 (568)
T ss_pred EeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCC-CCEEEEEecC--CEEEEEECCCCcEEEEEecccCCceeEEEEe
Confidence 6667788888887543322222 2245788999986 5555554442 47777777654433222211111111 111
Q ss_pred ---ecCCCEEEEEeCCC---CeEEEEeCCC--CCeEEEecCCCCceEEE--EEE--CCEEEEEeCCCCeEEEEeCccC
Q psy13635 272 ---DVDNEKLYWCDAKT---DKIEMIDFDG--NNRRELINENLPHVFGI--SLL--GDYVYWTDWQRRSIDRVNKITG 337 (357)
Q Consensus 272 ---d~~~~~lY~~d~~~---~~I~~~~~dG--~~~~~i~~~~~~~p~gi--a~~--~~~ly~td~~~~~I~~~~~~~g 337 (357)
...++.|..+-... ..|...++.. .....+... ..+..| .++ .+.+|++-.+.+.|+.++...+
T Consensus 220 ~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld--~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~ 295 (568)
T PTZ00420 220 DGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSID--NASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLG 295 (568)
T ss_pred eeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEec--CCccceEEeeeCCCCCEEEEEECCCeEEEEEccCC
Confidence 12334444433222 2576777653 222222111 112222 223 3677888777777877776444
No 187
>KOG1036|consensus
Probab=86.02 E-value=26 Score=31.72 Aligned_cols=54 Identities=17% Similarity=0.108 Sum_probs=34.8
Q ss_pred EeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCC
Q psy13635 47 ATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDG 102 (357)
Q Consensus 47 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g 102 (357)
..++.|+++|+.++ +...+-........|.+.+..+.+ ++..-++.|.-.+.-+
T Consensus 72 ~~dg~vr~~Dln~~-~~~~igth~~~i~ci~~~~~~~~v-IsgsWD~~ik~wD~R~ 125 (323)
T KOG1036|consen 72 GLDGQVRRYDLNTG-NEDQIGTHDEGIRCIEYSYEVGCV-ISGSWDKTIKFWDPRN 125 (323)
T ss_pred ccCceEEEEEecCC-cceeeccCCCceEEEEeeccCCeE-EEcccCccEEEEeccc
Confidence 33778999999873 444444555667788888766654 4444456666666543
No 188
>KOG3914|consensus
Probab=85.96 E-value=30 Score=32.39 Aligned_cols=161 Identities=15% Similarity=0.139 Sum_probs=96.5
Q ss_pred CceEEEeCCCCeEEEEeCCCCeEEEEEcCCCce--EEE-ecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC-CC
Q psy13635 178 PDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHR--KVL-VNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-GG 253 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~--~~~-~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-g~ 253 (357)
|...+..+....|++++... +...++.+++.. +.+ ....-..|..+.+....-..-++|..+.-..+.....+ |.
T Consensus 65 ~~~~~~s~~~~llAv~~~~K-~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~ 143 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSK-QRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR 143 (390)
T ss_pred ccccccCCCceEEEEEeCCC-ceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence 33344444555666666654 444444444332 111 11123678999998887888888876431222222223 33
Q ss_pred ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEE-EecCCCCceEEEEEECCEEEEEeCCCCeEEEE
Q psy13635 254 ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRE-LINENLPHVFGISLLGDYVYWTDWQRRSIDRV 332 (357)
Q Consensus 254 ~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~-i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~ 332 (357)
.+..+ ..+.--..+++.+++.+|.-+|. ...|+.....+...-. +..++-.....|++..+.+.|+..+.++|+.=
T Consensus 144 ~~~~l--GhvSml~dVavS~D~~~IitaDR-DEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~W 220 (390)
T KOG3914|consen 144 CEPIL--GHVSMLLDVAVSPDDQFIITADR-DEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLW 220 (390)
T ss_pred cchhh--hhhhhhheeeecCCCCEEEEecC-CceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEE
Confidence 22222 34555678899887877777775 4578888877764321 11122234567888888889999999999888
Q ss_pred eCccCceeEE
Q psy13635 333 NKITGNDREV 342 (357)
Q Consensus 333 ~~~~g~~~~~ 342 (357)
+..+|+.+..
T Consensus 221 d~~sgk~L~t 230 (390)
T KOG3914|consen 221 DITSGKLLDT 230 (390)
T ss_pred ecccCCcccc
Confidence 8878887653
No 189
>KOG0270|consensus
Probab=85.83 E-value=33 Score=32.67 Aligned_cols=196 Identities=12% Similarity=0.061 Sum_probs=110.7
Q ss_pred EEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEE
Q psy13635 75 AIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVL 154 (357)
Q Consensus 75 ~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~ 154 (357)
++.+...-..|..+...+..|.-.+++... ....+...-.....+++.+....+..+.+..+++...+.......-.
T Consensus 248 ~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~---p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~ 324 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSADKTVKLWDVDTGK---PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGK 324 (463)
T ss_pred HHHhccccceeEEecCCCceEEEEEcCCCC---cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCc
Confidence 444444455677777777788888888764 24444445567788888888888888877777777766542110000
Q ss_pred EecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC--CCceEEEecCCCCCceEEEEeCCCCE
Q psy13635 155 YWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE--GTHRKVLVNTDLVEPRAITLSPAHGY 232 (357)
Q Consensus 155 ~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~--g~~~~~~~~~~~~~P~giavd~~~g~ 232 (357)
...- -....-++.|+..-..|++....++++-++.. |+....+.. .-....||.+....-.
T Consensus 325 ~wk~----------------~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~A-Hd~~ISgl~~n~~~p~ 387 (463)
T KOG0270|consen 325 EWKF----------------DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKA-HDDEISGLSVNIQTPG 387 (463)
T ss_pred eEEe----------------ccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEe-ccCCcceEEecCCCCc
Confidence 0000 01345566676666667766666677766654 333333322 2235678888877666
Q ss_pred EEEEeCCCCCCeEEEEecCCCceEEEeeC--CCCCceEEEEecCCCEEEEEeCCCCeEEEEe
Q psy13635 233 LFWSDWNEKRPKIERSLLNGGERVLLVKD--RLGWPNGITLDVDNEKLYWCDAKTDKIEMID 292 (357)
Q Consensus 233 Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~--~l~~P~giaid~~~~~lY~~d~~~~~I~~~~ 292 (357)
+-.+.... ..+..-++++.+...+... .+..-.+.+.++.....|..-...+.+...+
T Consensus 388 ~l~t~s~d--~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd 447 (463)
T KOG0270|consen 388 LLSTASTD--KVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWD 447 (463)
T ss_pred ceeecccc--ceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEee
Confidence 76775553 3555555555544333322 2334455666655555555543333333333
No 190
>KOG0284|consensus
Probab=85.49 E-value=28 Score=32.86 Aligned_cols=178 Identities=8% Similarity=0.046 Sum_probs=110.7
Q ss_pred CCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCC
Q psy13635 39 VAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT 118 (357)
Q Consensus 39 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 118 (357)
.+..|+-.+.++.|++-|..-..+..++....-.+..+|++|..+.|..... ++-|.-.+...+.+ ...+...-+.
T Consensus 191 nDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgsk-DnlVKlWDprSg~c---l~tlh~HKnt 266 (464)
T KOG0284|consen 191 NDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSK-DNLVKLWDPRSGSC---LATLHGHKNT 266 (464)
T ss_pred CCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccC-CceeEeecCCCcch---hhhhhhccce
Confidence 5677888888888988887665555555566667899999997776655444 34777777776642 2233333345
Q ss_pred ceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC
Q psy13635 119 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD 198 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~ 198 (357)
..++.+.+.+ +...|-+....+.++++.. -.+.....+- -.....++-.|....||.+....+
T Consensus 267 Vl~~~f~~n~-N~Llt~skD~~~kv~DiR~-mkEl~~~r~H---------------kkdv~~~~WhP~~~~lftsgg~Dg 329 (464)
T KOG0284|consen 267 VLAVKFNPNG-NWLLTGSKDQSCKVFDIRT-MKELFTYRGH---------------KKDVTSLTWHPLNESLFTSGGSDG 329 (464)
T ss_pred EEEEEEcCCC-CeeEEccCCceEEEEehhH-hHHHHHhhcc---------------hhhheeeccccccccceeeccCCC
Confidence 6777787644 6666777777788887751 1111110100 013456667788889998888877
Q ss_pred eEEEEEcCCCceEEEec-CCCCCceEEEEeCCCCEEEEEeC
Q psy13635 199 RIEVCRLEGTHRKVLVN-TDLVEPRAITLSPAHGYLFWSDW 238 (357)
Q Consensus 199 ~I~~~~~~g~~~~~~~~-~~~~~P~giavd~~~g~Ly~~d~ 238 (357)
.|.-...........+. ..-.....++.+|- |.|+-+-.
T Consensus 330 svvh~~v~~~~p~~~i~~AHd~~iwsl~~hPl-Ghil~tgs 369 (464)
T KOG0284|consen 330 SVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPL-GHILATGS 369 (464)
T ss_pred ceEEEeccccccccCCCcccccceeeeecccc-ceeEeecC
Confidence 77766666443322221 12345667777875 77766633
No 191
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=84.61 E-value=28 Score=30.88 Aligned_cols=207 Identities=16% Similarity=0.096 Sum_probs=117.3
Q ss_pred CceeEEEEcCCCeEEEEe--CCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 118 TPDGLAIDWLTEKLYWTD--SETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td--~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
.+...|+.+.++.+.+.. .+...+++...++.....+... .+..| .+|+. +.++..+.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~----------------~l~~P---S~d~~-g~~W~v~~ 84 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGG----------------SLTRP---SWDPD-GWVWTVDD 84 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCC----------------ccccc---cccCC-CCEEEEEc
Confidence 577888887777776666 5667888887777655544211 22233 56755 78888877
Q ss_pred CCCeEEEE--EcCCCceEEEecC-CCC-CceEEEEeCCCCEEEEEeCCCCCCeEEEEec--CCCc-eE------EEeeCC
Q psy13635 196 GTDRIEVC--RLEGTHRKVLVNT-DLV-EPRAITLSPAHGYLFWSDWNEKRPKIERSLL--NGGE-RV------LLVKDR 262 (357)
Q Consensus 196 ~~~~I~~~--~~~g~~~~~~~~~-~~~-~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~--dg~~-~~------~~~~~~ 262 (357)
+....... ..+|.....-+.. .+. ....+.++|+.-++-+.-.....++|+.... ++.. .. .+....
T Consensus 85 ~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~ 164 (253)
T PF10647_consen 85 GSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPL 164 (253)
T ss_pred CCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccc
Confidence 65543333 2345444333322 222 6789999998777666553322357776653 2222 11 111122
Q ss_pred CCCceEEEEecCCCEEEEEeCC-CCeEEE-EeCCCCCeEEEecCCCCceEEEEE--ECCEEEEEeCCCCeEEEEeCccCc
Q psy13635 263 LGWPNGITLDVDNEKLYWCDAK-TDKIEM-IDFDGNNRRELINENLPHVFGISL--LGDYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 263 l~~P~giaid~~~~~lY~~d~~-~~~I~~-~~~dG~~~~~i~~~~~~~p~gia~--~~~~ly~td~~~~~I~~~~~~~g~ 338 (357)
+..+..++-- .++.|.+.-.. ...+.. +..+|...+.+.... ..+.-++. ....+|.++. +.+++ ...|.
T Consensus 165 ~~~v~~v~W~-~~~~L~V~~~~~~~~~~~~v~~dG~~~~~l~~~~-~~~~v~a~~~~~~~~~~t~~--~~~~~--~~~~~ 238 (253)
T PF10647_consen 165 LSDVTDVAWS-DDSTLVVLGRSAGGPVVRLVSVDGGPSTPLPSVN-LGVPVVAVAASPSTVYVTDD--GGVLQ--SRSGA 238 (253)
T ss_pred cCcceeeeec-CCCEEEEEeCCCCCceeEEEEccCCcccccCCCC-CCcceEEeeCCCcEEEEECC--CcEEE--CCCCC
Confidence 3455677775 56666655543 334555 778887766553322 23333343 3577888873 46655 33677
Q ss_pred eeEEEecccCCc
Q psy13635 339 DREVIIERSCTG 350 (357)
Q Consensus 339 ~~~~i~~~l~~p 350 (357)
.-..+......|
T Consensus 239 ~W~~v~~~~~~P 250 (253)
T PF10647_consen 239 SWREVPGGVGDP 250 (253)
T ss_pred cceEccCCCCCC
Confidence 776666655444
No 192
>KOG0286|consensus
Probab=84.23 E-value=32 Score=31.12 Aligned_cols=239 Identities=7% Similarity=0.010 Sum_probs=132.3
Q ss_pred EEeecCCCCeEEEEEeCCc-EEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC-CeEEEEEcCCCCc-ceeE
Q psy13635 33 YALSHHVAAQMLLFATSKD-IRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT-EMISCCTFDGNNV-GSKH 109 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~-~~I~~~~~~g~~~-~~~~ 109 (357)
|++.=+++...++-++++. +.+-|.-++.+...+.-.-.-...-+|.|..+.+=-....+ -.||.++....+. +...
T Consensus 59 ~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~ 138 (343)
T KOG0286|consen 59 YAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVS 138 (343)
T ss_pred eeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceee
Confidence 4555555555565555443 44556555444444433444567778888666543333322 2577666442210 1111
Q ss_pred EEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 110 NVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 110 ~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
..+...-.......+- .+.-.+|.++..+..-.++........+..- .....+|++-|.+++
T Consensus 139 r~l~gHtgylScC~f~--dD~~ilT~SGD~TCalWDie~g~~~~~f~GH----------------~gDV~slsl~p~~~n 200 (343)
T KOG0286|consen 139 RELAGHTGYLSCCRFL--DDNHILTGSGDMTCALWDIETGQQTQVFHGH----------------TGDVMSLSLSPSDGN 200 (343)
T ss_pred eeecCccceeEEEEEc--CCCceEecCCCceEEEEEcccceEEEEecCC----------------cccEEEEecCCCCCC
Confidence 1222222223333332 2333456666667666676544443333211 124567777777889
Q ss_pred EEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-C-CCCce
Q psy13635 190 LYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-R-LGWPN 267 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-~-l~~P~ 267 (357)
.|++..-......-|...........+.-...+.+.+.|. |.-|.+-... +....+++.......+++. . ....+
T Consensus 201 tFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~-G~afatGSDD--~tcRlyDlRaD~~~a~ys~~~~~~git 277 (343)
T KOG0286|consen 201 TFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPS-GDAFATGSDD--ATCRLYDLRADQELAVYSHDSIICGIT 277 (343)
T ss_pred eEEecccccceeeeeccCcceeEeecccccccceEEEccC-CCeeeecCCC--ceeEEEeecCCcEEeeeccCcccCCce
Confidence 9998877665555555433443444445567888999985 8888887763 4666666665444444432 2 33347
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeC
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~ 293 (357)
++++. ..|+|.++-.....+.+-|.
T Consensus 278 Sv~FS-~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 278 SVAFS-KSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred eEEEc-ccccEEEeeecCCceeEeec
Confidence 89997 67888887666666666554
No 193
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=84.13 E-value=41 Score=32.39 Aligned_cols=69 Identities=13% Similarity=0.086 Sum_probs=35.4
Q ss_pred ceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEec----CCC--------CcceeeeeccCcccccCCceEEEeCC
Q psy13635 119 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE----DID--------QPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~----~~~--------~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
|..|.+.-..+.||++....+.|+.+++.......++.+ +.- +.+.+ -..|+=+.+...
T Consensus 314 itDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l---------~GgPqMvqlS~D 384 (461)
T PF05694_consen 314 ITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRL---------RGGPQMVQLSLD 384 (461)
T ss_dssp ---EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS---------------S----EEE-TT
T ss_pred eEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCcccccccc---------CCCCCeEEEccC
Confidence 466667777999999999999999999866443322211 110 11111 136777888888
Q ss_pred CCeEEEEeCC
Q psy13635 187 ARNLYWTDTG 196 (357)
Q Consensus 187 ~~~lY~td~~ 196 (357)
+.+||||++-
T Consensus 385 GkRlYvTnSL 394 (461)
T PF05694_consen 385 GKRLYVTNSL 394 (461)
T ss_dssp SSEEEEE---
T ss_pred CeEEEEEeec
Confidence 9999999864
No 194
>PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium []. Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding
Probab=83.82 E-value=31 Score=30.67 Aligned_cols=195 Identities=14% Similarity=0.077 Sum_probs=100.4
Q ss_pred ccCCEEEEEeCCCC-eEEEEEcCCCC-c---ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceE-E
Q psy13635 80 YKKSMVCWTDHGTE-MISCCTFDGNN-V---GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK-V 153 (357)
Q Consensus 80 ~~~~~ly~~d~~~~-~I~~~~~~g~~-~---~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~-~ 153 (357)
...+++||++...+ .+.....-... . ....-.+...... .|-+|- ++.||+--.+...|.+.++..+... .
T Consensus 28 ~~~~~iy~~~~~~~~~v~ey~~~~~f~~~~~~~~~~~Lp~~~~G-tG~vVY--ngslYY~~~~s~~IvkydL~t~~v~~~ 104 (250)
T PF02191_consen 28 SDSEKIYVTSGFSGNTVYEYRNYEDFLRNGRSSRTYKLPYPWQG-TGHVVY--NGSLYYNKYNSRNIVKYDLTTRSVVAR 104 (250)
T ss_pred CCCCCEEEECccCCCEEEEEcCHhHHhhcCCCceEEEEeceecc-CCeEEE--CCcEEEEecCCceEEEEECcCCcEEEE
Confidence 34678999877543 44443221111 0 0112233333333 344443 6889999999999999999887654 3
Q ss_pred EEecC--CCCcceeeeeccCcccccCCceEEEeCCCC--eEEEEeCCCCeEEEEEcCCCce--EEEecCCCCCc---eEE
Q psy13635 154 LYWED--IDQPRAIASYKLPTIEVEHPDGVAVDWVAR--NLYWTDTGTDRIEVCRLEGTHR--KVLVNTDLVEP---RAI 224 (357)
Q Consensus 154 ~~~~~--~~~p~~i~~~~~~~~~~~~p~glavD~~~~--~lY~td~~~~~I~~~~~~g~~~--~~~~~~~~~~P---~gi 224 (357)
....+ ..+.... ...-..--++|+| .+| -||-+....+.|....+|-... +......+..+ ++.
T Consensus 105 ~~L~~A~~~n~~~y------~~~~~t~iD~AvD-E~GLWvIYat~~~~g~ivvskld~~tL~v~~tw~T~~~k~~~~naF 177 (250)
T PF02191_consen 105 RELPGAGYNNRFPY------YWSGYTDIDFAVD-ENGLWVIYATEDNNGNIVVSKLDPETLSVEQTWNTSYPKRSAGNAF 177 (250)
T ss_pred EECCccccccccce------ecCCCceEEEEEc-CCCEEEEEecCCCCCcEEEEeeCcccCceEEEEEeccCchhhccee
Confidence 22111 1000000 0011122578999 444 2344455555566655554332 22222233322 345
Q ss_pred EEeCCCCEEEEEeCCCC-CCeEE-EEecCCCceE---EEeeCCCCCceEEEEecCCCEEEEEeCCCCe
Q psy13635 225 TLSPAHGYLFWSDWNEK-RPKIE-RSLLNGGERV---LLVKDRLGWPNGITLDVDNEKLYWCDAKTDK 287 (357)
Q Consensus 225 avd~~~g~Ly~~d~~~~-~~~I~-~~~~dg~~~~---~~~~~~l~~P~giaid~~~~~lY~~d~~~~~ 287 (357)
.++ |-||.++.... ..+|. ..++...... ..+.........|..+|.+.+||.=|.+..-
T Consensus 178 mvC---GvLY~~~s~~~~~~~I~yafDt~t~~~~~~~i~f~~~~~~~~~l~YNP~dk~LY~wd~G~~v 242 (250)
T PF02191_consen 178 MVC---GVLYATDSYDTRDTEIFYAFDTYTGKEEDVSIPFPNPYGNISMLSYNPRDKKLYAWDNGYQV 242 (250)
T ss_pred eEe---eEEEEEEECCCCCcEEEEEEECCCCceeceeeeeccccCceEeeeECCCCCeEEEEECCeEE
Confidence 555 89999998753 12333 3333322111 1122234456788999999999988855433
No 195
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=83.67 E-value=41 Score=32.02 Aligned_cols=242 Identities=12% Similarity=0.176 Sum_probs=125.8
Q ss_pred EEEEEccCCEEEEE-eCCCC---eEEEEEcCCCCcceeEEEEeCCcCCc--eeEEEEcCCCeEEEEeCC----------C
Q psy13635 75 AIDYYYKKSMVCWT-DHGTE---MISCCTFDGNNVGSKHNVITNGLITP--DGLAIDWLTEKLYWTDSE----------T 138 (357)
Q Consensus 75 ~i~~d~~~~~ly~~-d~~~~---~I~~~~~~g~~~~~~~~~~~~~~~~p--~glavd~~~~~ly~td~~----------~ 138 (357)
+..+++++..+-++ |.++. .|+..++.++. .+...+..+ .+++....+..+|++... .
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~------~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~ 201 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGK------FLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYP 201 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTE------EEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCC
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCCc------CcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCC
Confidence 56677777777666 33222 47777887653 112222222 236666555677777643 3
Q ss_pred CEEEEEEcCCCceE--EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--C-CeEEEEEcCCC-----
Q psy13635 139 NKLEVSSLDGKKRK--VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--T-DRIEVCRLEGT----- 208 (357)
Q Consensus 139 ~~I~~~~~~g~~~~--~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~-~~I~~~~~~g~----- 208 (357)
.+|++..+.....+ .++... .. .+ .-.++.....++.|++.-.. . ..++.++++..
T Consensus 202 ~~v~~~~~gt~~~~d~lvfe~~-~~------------~~-~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~ 267 (414)
T PF02897_consen 202 RQVYRHKLGTPQSEDELVFEEP-DE------------PF-WFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDA 267 (414)
T ss_dssp EEEEEEETTS-GGG-EEEEC-T-TC------------TT-SEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-
T ss_pred cEEEEEECCCChHhCeeEEeec-CC------------Cc-EEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcC
Confidence 34666666554332 333221 11 11 12256667667777765433 2 36888888763
Q ss_pred ceEEEecCCCCCceEEEEeCCCCEEEE-EeCCCCCCeEEEEecCCCce---E-EEeeCCC-CCceEEEEecCCCEEEEEe
Q psy13635 209 HRKVLVNTDLVEPRAITLSPAHGYLFW-SDWNEKRPKIERSLLNGGER---V-LLVKDRL-GWPNGITLDVDNEKLYWCD 282 (357)
Q Consensus 209 ~~~~~~~~~~~~P~giavd~~~g~Ly~-~d~~~~~~~I~~~~~dg~~~---~-~~~~~~l-~~P~giaid~~~~~lY~~d 282 (357)
..+.+....-..-..+... ++.+|+ ++.+..+++|.+++++.... . +++...- ....++.+ .+++|++..
T Consensus 268 ~~~~l~~~~~~~~~~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~ 343 (414)
T PF02897_consen 268 KPKLLSPREDGVEYYVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSY 343 (414)
T ss_dssp SEEEEEESSSS-EEEEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEE
T ss_pred CcEEEeCCCCceEEEEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEE
Confidence 3334433221222223333 577775 55444468999999987652 3 4443321 23456666 578888766
Q ss_pred C--CCCeEEEEeCC-CCCeEEEecCCCCceEEEEEE--CCEEEE--EeCCC-CeEEEEeCccCcee
Q psy13635 283 A--KTDKIEMIDFD-GNNRRELINENLPHVFGISLL--GDYVYW--TDWQR-RSIDRVNKITGNDR 340 (357)
Q Consensus 283 ~--~~~~I~~~~~d-G~~~~~i~~~~~~~p~gia~~--~~~ly~--td~~~-~~I~~~~~~~g~~~ 340 (357)
. ...+|..++++ |.....+.........++..+ ++.+++ +++.. .++++++..+|+..
T Consensus 344 ~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~ 409 (414)
T PF02897_consen 344 RENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT 409 (414)
T ss_dssp EETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred EECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence 4 44578889998 655544433223333444433 355544 33333 67889998666543
No 196
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=82.73 E-value=44 Score=31.65 Aligned_cols=208 Identities=11% Similarity=0.098 Sum_probs=87.3
Q ss_pred CCcEEEEEcCCCCcceEeccCC-CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE--EeCCcCCceeEEEE
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDL-EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV--ITNGLITPDGLAID 125 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~-~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--~~~~~~~p~glavd 125 (357)
..++..+|+.+ ...+++...- ....|.-+.+.+..+|+... ...++++++++.. ...+ +..+...-....++
T Consensus 59 ~~nly~lDL~t-~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~-~~~l~~vdL~T~e---~~~vy~~p~~~~g~gt~v~n 133 (386)
T PF14583_consen 59 NRNLYLLDLAT-GEITQLTDGPGDNTFGGFLSPDDRALYYVKN-GRSLRRVDLDTLE---ERVVYEVPDDWKGYGTWVAN 133 (386)
T ss_dssp S-EEEEEETTT--EEEE---SS-B-TTT-EE-TTSSEEEEEET-TTEEEEEETTT-----EEEEEE--TTEEEEEEEEE-
T ss_pred CcceEEEEccc-CEEEECccCCCCCccceEEecCCCeEEEEEC-CCeEEEEECCcCc---EEEEEECCcccccccceeeC
Confidence 45688999987 4555554432 22335566788889876542 3589999999875 1222 22222211122233
Q ss_pred cCCCeEEEE-eC---------------------CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEE
Q psy13635 126 WLTEKLYWT-DS---------------------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAV 183 (357)
Q Consensus 126 ~~~~~ly~t-d~---------------------~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glav 183 (357)
. .+..++. .. -..+|.++++.++..+++.....=- ..-..+|..
T Consensus 134 ~-d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wl----------gH~~fsP~d--- 199 (386)
T PF14583_consen 134 S-DCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWL----------GHVQFSPTD--- 199 (386)
T ss_dssp T-TSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-E----------EEEEEETTE---
T ss_pred C-CccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccc----------cCcccCCCC---
Confidence 2 2333321 10 1257888888887777776433100 001112321
Q ss_pred eCCCCeEEEEeCCC-----CeEEEEEcCCCceEEEecCCCCCceEEE----EeCCCCEEEEEeC-C-CCCCeEEEEecCC
Q psy13635 184 DWVARNLYWTDTGT-----DRIEVCRLEGTHRKVLVNTDLVEPRAIT----LSPAHGYLFWSDW-N-EKRPKIERSLLNG 252 (357)
Q Consensus 184 D~~~~~lY~td~~~-----~~I~~~~~~g~~~~~~~~~~~~~P~gia----vd~~~g~Ly~~d~-~-~~~~~I~~~~~dg 252 (357)
.+.|=+|..+. .||..++.+|+..+.+.... +.-++ ..+.+..|++... . ....-|..++++.
T Consensus 200 ---p~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~---~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t 273 (386)
T PF14583_consen 200 ---PTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRM---EGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDT 273 (386)
T ss_dssp ---EEEEEEEE-S-TTTSS-SEEEEETTS---EESS------TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT
T ss_pred ---CCEEEEeccCCcceeceEEEEEEcCCCcceeeecCC---CCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCC
Confidence 12333455542 49999999999877765421 22221 2233333433222 1 1123566666665
Q ss_pred CceEEEeeCCCCCceEEEEecCCCEEEEEeCC
Q psy13635 253 GERVLLVKDRLGWPNGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 253 ~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~ 284 (357)
..++.+..- ..-.-+... .++.|++-|.+
T Consensus 274 ~~~~~~~~~--p~~~H~~ss-~Dg~L~vGDG~ 302 (386)
T PF14583_consen 274 GERRRLMEM--PWCSHFMSS-PDGKLFVGDGG 302 (386)
T ss_dssp --EEEEEEE---SEEEEEE--TTSSEEEEEE-
T ss_pred CCceEEEeC--CceeeeEEc-CCCCEEEecCC
Confidence 444433211 112233333 46667776644
No 197
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=82.36 E-value=35 Score=30.29 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=42.0
Q ss_pred cCCCcEEEEEEEc--cCC--EEEEEeCCCCeEEEEEcC-CCCcceeEEEEeCCc---CCceeEEEEcCCCeEEEEeCCCC
Q psy13635 68 KDLEEGAAIDYYY--KKS--MVCWTDHGTEMISCCTFD-GNNVGSKHNVITNGL---ITPDGLAIDWLTEKLYWTDSETN 139 (357)
Q Consensus 68 ~~~~~~~~i~~d~--~~~--~ly~~d~~~~~I~~~~~~-g~~~~~~~~~~~~~~---~~p~glavd~~~~~ly~td~~~~ 139 (357)
++++.+.|++... ..+ .+|+++.. +.|....+- +.. ..........+ ...+|+..|-..+.||+++.. -
T Consensus 150 s~~s~~YGl~lyrs~ktgd~yvfV~~~q-G~~~Qy~l~d~gn-Gkv~~k~vR~fk~~tQTEG~VaDdEtG~LYIaeEd-v 226 (364)
T COG4247 150 SSSSSAYGLALYRSPKTGDYYVFVNRRQ-GDIAQYKLIDQGN-GKVGTKLVRQFKIPTQTEGMVADDETGFLYIAEED-V 226 (364)
T ss_pred cCcccceeeEEEecCCcCcEEEEEecCC-CceeEEEEEecCC-ceEcceeeEeeecCCcccceeeccccceEEEeecc-c
Confidence 4667788887754 323 33444444 556555542 221 11122222222 356888888889999988753 4
Q ss_pred EEEEEEc
Q psy13635 140 KLEVSSL 146 (357)
Q Consensus 140 ~I~~~~~ 146 (357)
.|+++..
T Consensus 227 aiWK~~A 233 (364)
T COG4247 227 AIWKYEA 233 (364)
T ss_pred eeeeccc
Confidence 5665543
No 198
>KOG2110|consensus
Probab=81.37 E-value=47 Score=30.98 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=67.6
Q ss_pred ecCCCCeEEEEEe---CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE
Q psy13635 36 SHHVAAQMLLFAT---SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI 112 (357)
Q Consensus 36 ~~~~~~~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 112 (357)
+.+...-+|.+.. ..+|..+|+..-.....+-..-+...+++|++ +|.+.=+-...|.|.|+-.-... +...-.
T Consensus 136 S~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~-~G~llATASeKGTVIRVf~v~~G--~kl~eF 212 (391)
T KOG2110|consen 136 SPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSP-DGTLLATASEKGTVIRVFSVPEG--QKLYEF 212 (391)
T ss_pred ccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECC-CCCEEEEeccCceEEEEEEcCCc--cEeeee
Confidence 3343344566554 34688888776445555556677788999997 55565555555665554433221 112222
Q ss_pred eCC--cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 113 TNG--LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 113 ~~~--~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
..| ..+...|++++.+. +.-+.+++++|..+.++...
T Consensus 213 RRG~~~~~IySL~Fs~ds~-~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 213 RRGTYPVSIYSLSFSPDSQ-FLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred eCCceeeEEEEEEECCCCC-eEEEecCCCeEEEEEecccc
Confidence 333 35678899997655 44556678899999887654
No 199
>KOG2110|consensus
Probab=80.96 E-value=48 Score=30.89 Aligned_cols=150 Identities=10% Similarity=0.055 Sum_probs=87.1
Q ss_pred EEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceE-EEEeCCCCEEEEEeCCCC-CCeEEEEecCCCceEEEe
Q psy13635 182 AVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRA-ITLSPAHGYLFWSDWNEK-RPKIERSLLNGGERVLLV 259 (357)
Q Consensus 182 avD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~g-iavd~~~g~Ly~~d~~~~-~~~I~~~~~dg~~~~~~~ 259 (357)
+|--..++|.++-.. .|++.|+..-....-+...-.+|.| +|+.+..+.-|.+-.+.. .+.|...+...-.....+
T Consensus 92 ~VrmNr~RLvV~Lee--~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I 169 (391)
T KOG2110|consen 92 AVRMNRKRLVVCLEE--SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTI 169 (391)
T ss_pred EEEEccceEEEEEcc--cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEE
Confidence 343346677777664 3888887653322222222245663 456665555555543321 378888887665554444
Q ss_pred eCCCCCceEEEEecCCCEEEEEeCCCCeEEEEe--CCCCCeEEEecCC-CCceEEEEEEC-CEEEEEeCCCCeEEEEeC
Q psy13635 260 KDRLGWPNGITLDVDNEKLYWCDAKTDKIEMID--FDGNNRRELINEN-LPHVFGISLLG-DYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 260 ~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~--~dG~~~~~i~~~~-~~~p~gia~~~-~~ly~td~~~~~I~~~~~ 334 (357)
...-..-..||++ .+|.+.-+-+..|.|.|+- .+|+...++--+- .-....|++.. ..+.-+.+.+++|+.+..
T Consensus 170 ~aH~~~lAalafs-~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL 247 (391)
T KOG2110|consen 170 NAHKGPLAALAFS-PDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKL 247 (391)
T ss_pred EecCCceeEEEEC-CCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEe
Confidence 4444456789998 6778888887788776654 3666555443211 11345677764 344444556688877765
No 200
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=80.23 E-value=35 Score=28.88 Aligned_cols=100 Identities=10% Similarity=0.028 Sum_probs=60.1
Q ss_pred CceEEEeCCCCeEEEEeC-CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceE
Q psy13635 178 PDGVAVDWVARNLYWTDT-GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERV 256 (357)
Q Consensus 178 p~glavD~~~~~lY~td~-~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~ 256 (357)
..+++..|.+..+.+... ...+|...+..+.....+. -...+.|..+|.+..|..+..+...+.|...+.+ ...
T Consensus 62 I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~~---~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~--~~~ 136 (194)
T PF08662_consen 62 IHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSFG---TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR--KKK 136 (194)
T ss_pred eEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEeec---CCCceEEEECCCCCEEEEEEccCCCcEEEEEECC--CCE
Confidence 455666666666655543 3347888887765544442 2456789999987777777765333567777776 333
Q ss_pred EEeeCCCCCceEEEEecCCCEEEEEe
Q psy13635 257 LLVKDRLGWPNGITLDVDNEKLYWCD 282 (357)
Q Consensus 257 ~~~~~~l~~P~giaid~~~~~lY~~d 282 (357)
.+....-.....++.+|++..+..+.
T Consensus 137 ~i~~~~~~~~t~~~WsPdGr~~~ta~ 162 (194)
T PF08662_consen 137 KISTFEHSDATDVEWSPDGRYLATAT 162 (194)
T ss_pred EeeccccCcEEEEEEcCCCCEEEEEE
Confidence 33333333456777776555554443
No 201
>KOG3621|consensus
Probab=79.47 E-value=29 Score=35.05 Aligned_cols=111 Identities=12% Similarity=0.044 Sum_probs=65.7
Q ss_pred CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC-----ceEEEeeCCCCCce-EEEEecCCCEEEEEeCCCCeEEEEeC
Q psy13635 220 EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG-----ERVLLVKDRLGWPN-GITLDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 220 ~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~-----~~~~~~~~~l~~P~-giaid~~~~~lY~~d~~~~~I~~~~~ 293 (357)
....++-++..-++|.-|.. ++|.-..++.. ..+.+. ..+. =+.+|+...+|.++..... ..++.
T Consensus 126 rVTal~Ws~~~~k~ysGD~~---Gkv~~~~L~s~~~~~~~~q~il----~~ds~IVQlD~~q~~LLVStl~r~--~Lc~t 196 (726)
T KOG3621|consen 126 RVTALEWSKNGMKLYSGDSQ---GKVVLTELDSRQAFLSKSQEIL----SEDSEIVQLDYLQSYLLVSTLTRC--ILCQT 196 (726)
T ss_pred eEEEEEecccccEEeecCCC---ceEEEEEechhhhhccccceee----ccCcceEEeecccceehHhhhhhh--heeec
Confidence 45677788877789999887 68888888762 112222 2222 3578888888888765432 22333
Q ss_pred CCCCeEEEecCC--CCceEEEEEECC-------EEEEEeCCCCeEEEEeCccCceeE
Q psy13635 294 DGNNRRELINEN--LPHVFGISLLGD-------YVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 294 dG~~~~~i~~~~--~~~p~gia~~~~-------~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
+-...+.+.... ...++|-+++.| .||-+-++ .++|.+|. .|....
T Consensus 197 E~eti~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG-~RlWead~-~G~V~~ 251 (726)
T KOG3621|consen 197 EAETITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPG-LRLWEADF-AGEVIK 251 (726)
T ss_pred chhHHHHhcCCCcCCccccceEEeeccccCCCceEEEecCC-CceEEeec-ceeEEE
Confidence 322222232222 223677777643 57777655 68888887 566444
No 202
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=79.41 E-value=58 Score=30.88 Aligned_cols=160 Identities=14% Similarity=0.089 Sum_probs=78.1
Q ss_pred EccCCEEE-EEeC-CCCeEEEEEcCCCCcceeEEEEeCCc-CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEE
Q psy13635 79 YYKKSMVC-WTDH-GTEMISCCTFDGNNVGSKHNVITNGL-ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLY 155 (357)
Q Consensus 79 d~~~~~ly-~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~~-~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~ 155 (357)
..++.+|. .++. +...++.+++++.. .+.+..+- .+..|..+.+.++.+|+... ..++.+++++....+.+.
T Consensus 44 t~dG~kllF~s~~dg~~nly~lDL~t~~----i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~-~~~l~~vdL~T~e~~~vy 118 (386)
T PF14583_consen 44 TDDGRKLLFASDFDGNRNLYLLDLATGE----ITQLTDGPGDNTFGGFLSPDDRALYYVKN-GRSLRRVDLDTLEERVVY 118 (386)
T ss_dssp -TTS-EEEEEE-TTSS-EEEEEETTT-E----EEE---SS-B-TTT-EE-TTSSEEEEEET-TTEEEEEETTT--EEEEE
T ss_pred CCCCCEEEEEeccCCCcceEEEEcccCE----EEECccCCCCCccceEEecCCCeEEEEEC-CCeEEEEECCcCcEEEEE
Confidence 33444554 4453 33579999999875 44444432 33346677778899877653 468999999987766654
Q ss_pred ecCCCCcceeeeeccCcccccCCceEE-EeCCCCeEEEEeC----------------------CCCeEEEEEcCCCceEE
Q psy13635 156 WEDIDQPRAIASYKLPTIEVEHPDGVA-VDWVARNLYWTDT----------------------GTDRIEVCRLEGTHRKV 212 (357)
Q Consensus 156 ~~~~~~p~~i~~~~~~~~~~~~p~gla-vD~~~~~lY~td~----------------------~~~~I~~~~~~g~~~~~ 212 (357)
... . .+. ..|-. ++ ..+..++... -..+|..+++.+...++
T Consensus 119 ~~p----~----------~~~-g~gt~v~n-~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~ 182 (386)
T PF14583_consen 119 EVP----D----------DWK-GYGTWVAN-SDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKV 182 (386)
T ss_dssp E------T----------TEE-EEEEEEE--TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEE
T ss_pred ECC----c----------ccc-cccceeeC-CCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeE
Confidence 321 0 000 01111 12 1222222110 02379999999877777
Q ss_pred EecCCCCCceEEEEeCCCC-EEEEEeCCCC---CCeEEEEecCCCceEEEee
Q psy13635 213 LVNTDLVEPRAITLSPAHG-YLFWSDWNEK---RPKIERSLLNGGERVLLVK 260 (357)
Q Consensus 213 ~~~~~~~~P~giavd~~~g-~Ly~~d~~~~---~~~I~~~~~dg~~~~~~~~ 260 (357)
+..+. ..-.-+-++|... .|-+|-.+.. ..+|+.++.||++...+..
T Consensus 183 v~~~~-~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~ 233 (386)
T PF14583_consen 183 VFEDT-DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHR 233 (386)
T ss_dssp EEEES-S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS-
T ss_pred EEecC-ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeec
Confidence 77643 2233444555433 5566665543 3599999999998877653
No 203
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=79.15 E-value=9.2 Score=36.64 Aligned_cols=62 Identities=15% Similarity=0.132 Sum_probs=35.3
Q ss_pred CCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec-----CC--------------CCCceEEEEeCCCCEEEEEe
Q psy13635 177 HPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN-----TD--------------LVEPRAITLSPAHGYLFWSD 237 (357)
Q Consensus 177 ~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~-----~~--------------~~~P~giavd~~~g~Ly~~d 237 (357)
-+.+|.+....+.||++++..+.|+++|......-.++. +. ...|.-+.++.++.+||||.
T Consensus 313 LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 313 LITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp ----EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred ceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 467888877799999999999999999977533222221 11 12578899998889999997
Q ss_pred C
Q psy13635 238 W 238 (357)
Q Consensus 238 ~ 238 (357)
+
T Consensus 393 S 393 (461)
T PF05694_consen 393 S 393 (461)
T ss_dssp -
T ss_pred e
Confidence 4
No 204
>KOG0276|consensus
Probab=78.92 E-value=75 Score=31.92 Aligned_cols=200 Identities=10% Similarity=0.061 Sum_probs=100.8
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR 151 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~ 151 (357)
...+++++|.+-.+. +..-+|.+...+.+....+....+...+. ..-.+- ..++-.++-++..+|.+++.+....
T Consensus 15 RVKsVd~HPtePw~l-a~LynG~V~IWnyetqtmVksfeV~~~Pv---Ra~kfi-aRknWiv~GsDD~~IrVfnynt~ek 89 (794)
T KOG0276|consen 15 RVKSVDFHPTEPWIL-AALYNGDVQIWNYETQTMVKSFEVSEVPV---RAAKFI-ARKNWIVTGSDDMQIRVFNYNTGEK 89 (794)
T ss_pred ceeeeecCCCCceEE-EeeecCeeEEEecccceeeeeeeecccch---hhheee-eccceEEEecCCceEEEEeccccee
Confidence 455566666554443 22334444444444332111111211111 222232 2455667788889999999976544
Q ss_pred EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCc-eEEEecCCCCCceEEEEeCCC
Q psy13635 152 KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTH-RKVLVNTDLVEPRAITLSPAH 230 (357)
Q Consensus 152 ~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~-~~~~~~~~~~~P~giavd~~~ 230 (357)
...+..-. .....|++.|..-.+. +.+..-.|..-+-+++- ......+.......+++.|.+
T Consensus 90 V~~FeAH~----------------DyIR~iavHPt~P~vL-tsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD 152 (794)
T KOG0276|consen 90 VKTFEAHS----------------DYIRSIAVHPTLPYVL-TSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKD 152 (794)
T ss_pred eEEeeccc----------------cceeeeeecCCCCeEE-ecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCC
Confidence 33322111 1456677777655433 33333356666666543 334444455668899999987
Q ss_pred CEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEE-EeCCCCeEEEEeCCC
Q psy13635 231 GYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYW-CDAKTDKIEMIDFDG 295 (357)
Q Consensus 231 g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~-~d~~~~~I~~~~~dG 295 (357)
..-|.+..-. +.|-.-.+........+.......+.+..-+.+++-|. +-+..+.|..-|...
T Consensus 153 ~ntFaS~sLD--rTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt 216 (794)
T KOG0276|consen 153 PNTFASASLD--RTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT 216 (794)
T ss_pred ccceeeeecc--ccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecch
Confidence 7777776543 24444444333333333333344555555444444443 334445555555543
No 205
>KOG0772|consensus
Probab=78.74 E-value=69 Score=31.37 Aligned_cols=212 Identities=10% Similarity=0.043 Sum_probs=113.9
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
+..+..+-.....+++|+ .|.=+++-+-...|...++.|-....-. .|.| -+...+..+.+...+.++
T Consensus 160 Ei~l~hgtk~Vsal~~Dp-~GaR~~sGs~Dy~v~~wDf~gMdas~~~------fr~l-----~P~E~h~i~sl~ys~Tg~ 227 (641)
T KOG0772|consen 160 EIQLKHGTKIVSALAVDP-SGARFVSGSLDYTVKFWDFQGMDASMRS------FRQL-----QPCETHQINSLQYSVTGD 227 (641)
T ss_pred eEeccCCceEEEEeeecC-CCceeeeccccceEEEEecccccccchh------hhcc-----CcccccccceeeecCCCC
Confidence 445556667788999997 4555566667788998888775432110 0111 133345667788876555
Q ss_pred eEEEEeCCCCeEEEEEcCCCceEEEecCC-----C----CCc---eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceE
Q psy13635 189 NLYWTDTGTDRIEVCRLEGTHRKVLVNTD-----L----VEP---RAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERV 256 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g~~~~~~~~~~-----~----~~P---~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~ 256 (357)
.|.+. .+...+..++.||........++ + .+. ..-..+|.+...|.|......-+||-++-.-...+
T Consensus 228 ~iLvv-sg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~q 306 (641)
T KOG0772|consen 228 QILVV-SGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQ 306 (641)
T ss_pred eEEEE-ecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhhee
Confidence 55544 44456777888887655444321 1 122 22335566777777776543235555554444444
Q ss_pred EEeeCC---C-CCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEE--Ee---cCCCCceEEEEEE-CCEEEEEeCCC
Q psy13635 257 LLVKDR---L-GWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRE--LI---NENLPHVFGISLL-GDYVYWTDWQR 326 (357)
Q Consensus 257 ~~~~~~---l-~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~--i~---~~~~~~p~gia~~-~~~ly~td~~~ 326 (357)
++.... . -.|..-+.+ .++.++-+--..+.|..-+..+..... .+ +........|++. .|....+-...
T Consensus 307 Vik~k~~~g~Rv~~tsC~~n-rdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D 385 (641)
T KOG0772|consen 307 VIKTKPAGGKRVPVTSCAWN-RDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFD 385 (641)
T ss_pred EEeeccCCCcccCceeeecC-CCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCC
Confidence 443221 1 124555666 456665555566777777663322111 11 1112244566664 45555555555
Q ss_pred CeEEEEeC
Q psy13635 327 RSIDRVNK 334 (357)
Q Consensus 327 ~~I~~~~~ 334 (357)
+++..-++
T Consensus 386 ~tLKvWDL 393 (641)
T KOG0772|consen 386 DTLKVWDL 393 (641)
T ss_pred Cceeeeec
Confidence 55544444
No 206
>KOG4441|consensus
Probab=77.63 E-value=83 Score=31.73 Aligned_cols=163 Identities=12% Similarity=0.101 Sum_probs=93.2
Q ss_pred CcEEEEEcCCCCcceEecc--CCCcEEEEEEEccCCEEEEEeCCCC-----eEEEEEcCCCCcceeEEEEeCCcCCceeE
Q psy13635 50 KDIRIANLSRPLKPVTIIK--DLEEGAAIDYYYKKSMVCWTDHGTE-----MISCCTFDGNNVGSKHNVITNGLITPDGL 122 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~--~~~~~~~i~~d~~~~~ly~~d~~~~-----~I~~~~~~g~~~~~~~~~~~~~~~~p~gl 122 (357)
+.+.++|.... +.....+ ..+.-.|++. -+|.||.....++ .+.+.+..... .+.+.+-...-.+.
T Consensus 349 ~~ve~YD~~~~-~W~~~a~M~~~R~~~~v~~--l~g~iYavGG~dg~~~l~svE~YDp~~~~----W~~va~m~~~r~~~ 421 (571)
T KOG4441|consen 349 SSVERYDPRTN-QWTPVAPMNTKRSDFGVAV--LDGKLYAVGGFDGEKSLNSVECYDPVTNK----WTPVAPMLTRRSGH 421 (571)
T ss_pred ceEEEecCCCC-ceeccCCccCccccceeEE--ECCEEEEEeccccccccccEEEecCCCCc----ccccCCCCcceeee
Confidence 45778888763 3333222 2223334443 4799999866543 47777777664 55555433334455
Q ss_pred EEEcCCCeEEEEeCC------CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 123 AIDWLTEKLYWTDSE------TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 123 avd~~~~~ly~td~~------~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
++-...++||++-.. -+.+.++++....=+.+. .+..+| .-.|+++ .+++||+....
T Consensus 422 gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~--~M~~~R-------------~~~g~a~--~~~~iYvvGG~ 484 (571)
T KOG4441|consen 422 GVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIA--PMNTRR-------------SGFGVAV--LNGKIYVVGGF 484 (571)
T ss_pred EEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecC--Cccccc-------------ccceEEE--ECCEEEEECCc
Confidence 555568999998752 256777776554333221 122222 2234555 58899988654
Q ss_pred C-----CeEEEEEcCCCceEEEecCC-CCCceEEEEeCCCCEEEEEeC
Q psy13635 197 T-----DRIEVCRLEGTHRKVLVNTD-LVEPRAITLSPAHGYLFWSDW 238 (357)
Q Consensus 197 ~-----~~I~~~~~~g~~~~~~~~~~-~~~P~giavd~~~g~Ly~~d~ 238 (357)
. .+|++.++....-..+..-. -....|+++. ++.||..-.
T Consensus 485 ~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG 530 (571)
T KOG4441|consen 485 DGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKLYAVGG 530 (571)
T ss_pred cCCCccceEEEEcCCCCceeEcccCccccccccEEEE--CCEEEEEec
Confidence 3 25888988877655553211 1223455555 688998854
No 207
>KOG0270|consensus
Probab=77.42 E-value=68 Score=30.63 Aligned_cols=187 Identities=9% Similarity=0.063 Sum_probs=107.3
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCe
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDR 199 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~ 199 (357)
..|+..+..+++..+-+..++|...+++.......+. ........+++.+....+..+....++
T Consensus 247 l~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~----------------~~~k~Vq~l~wh~~~p~~LLsGs~D~~ 310 (463)
T KOG0270|consen 247 LALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSIT----------------HHGKKVQTLEWHPYEPSVLLSGSYDGT 310 (463)
T ss_pred HHHHhccccceeEEecCCCceEEEEEcCCCCcceehh----------------hcCCceeEEEecCCCceEEEeccccce
Confidence 4566677788898888889999999998776665542 112345667777777777777776666
Q ss_pred EEEEEcC------------CCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCce
Q psy13635 200 IEVCRLE------------GTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 200 I~~~~~~------------g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
+...+.. |...++.. ....|.-.-+...+|.+|+.|.+.....++.... .-....
T Consensus 311 V~l~D~R~~~~s~~~wk~~g~VEkv~w--~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~A-----------Hd~~IS 377 (463)
T KOG0270|consen 311 VALKDCRDPSNSGKEWKFDGEVEKVAW--DPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKA-----------HDDEIS 377 (463)
T ss_pred EEeeeccCccccCceEEeccceEEEEe--cCCCceeEEEecCCceEEeeecCCCCCceeEEEe-----------ccCCcc
Confidence 6665543 22222222 2234555556666788888887753112222211 112345
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCC--CCceEEEE--EECCEEEEEeCCCCeEEEEeCc
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINEN--LPHVFGIS--LLGDYVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~--~~~p~gia--~~~~~ly~td~~~~~I~~~~~~ 335 (357)
||.+......+..+......+..-++++.+.+.+.... +......+ .+....|...-.++.+...+..
T Consensus 378 gl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~ 449 (463)
T KOG0270|consen 378 GLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIF 449 (463)
T ss_pred eEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecc
Confidence 67776666667777766677777777776554333211 22222223 2334555555444444445543
No 208
>KOG0292|consensus
Probab=75.66 E-value=1.1e+02 Score=32.21 Aligned_cols=170 Identities=12% Similarity=0.099 Sum_probs=99.0
Q ss_pred EEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceE
Q psy13635 73 GAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK 152 (357)
Q Consensus 73 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~ 152 (357)
....+|+| +--|+++...+..|.-..++.+...+ ..+.....++..++-+++ .+.|..+++..+.|.+.+++.....
T Consensus 209 VNwaAfhp-TlpliVSG~DDRqVKlWrmnetKaWE-vDtcrgH~nnVssvlfhp-~q~lIlSnsEDksirVwDm~kRt~v 285 (1202)
T KOG0292|consen 209 VNWAAFHP-TLPLIVSGADDRQVKLWRMNETKAWE-VDTCRGHYNNVSSVLFHP-HQDLILSNSEDKSIRVWDMTKRTSV 285 (1202)
T ss_pred cceEEecC-CcceEEecCCcceeeEEEecccccee-ehhhhcccCCcceEEecC-ccceeEecCCCccEEEEecccccce
Confidence 33456665 45677887766665555555553221 234455677889999996 7778899999999999999876554
Q ss_pred EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCE
Q psy13635 153 VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGY 232 (357)
Q Consensus 153 ~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~ 232 (357)
..+...-++.. -||..| ..+||-+.-.++ ++++.++ -+.| ..+++ .+.
T Consensus 286 ~tfrrendRFW----------------~laahP-~lNLfAAgHDsG-m~VFkle-----------RErp-a~~v~--~n~ 333 (1202)
T KOG0292|consen 286 QTFRRENDRFW----------------ILAAHP-ELNLFAAGHDSG-MIVFKLE-----------RERP-AYAVN--GNG 333 (1202)
T ss_pred eeeeccCCeEE----------------EEEecC-CcceeeeecCCc-eEEEEEc-----------ccCc-eEEEc--CCE
Confidence 44433322222 233332 235554433222 2222111 1233 45666 456
Q ss_pred EEEEeCCCCCCeEEEEecCCCceEEEeeC-C----CCCceEEEEecCCCEEEEE
Q psy13635 233 LFWSDWNEKRPKIERSLLNGGERVLLVKD-R----LGWPNGITLDVDNEKLYWC 281 (357)
Q Consensus 233 Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-~----l~~P~giaid~~~~~lY~~ 281 (357)
||+... ..|...++.......+.+- . -..|..+..++.++.+.++
T Consensus 334 LfYvkd----~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlic 383 (1202)
T KOG0292|consen 334 LFYVKD----RFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLIC 383 (1202)
T ss_pred EEEEcc----ceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeEEEE
Confidence 666662 3788888776443333321 1 2346788888888888887
No 209
>KOG3621|consensus
Probab=75.52 E-value=98 Score=31.49 Aligned_cols=189 Identities=16% Similarity=0.178 Sum_probs=95.3
Q ss_pred CceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEe--cCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 118 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYW--EDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
....++.+....++|..|. .|+|.-..++.. ...... .-+..+.. =+-+|...+.|.++..
T Consensus 126 rVTal~Ws~~~~k~ysGD~-~Gkv~~~~L~s~-~~~~~~~q~il~~ds~---------------IVQlD~~q~~LLVStl 188 (726)
T KOG3621|consen 126 RVTALEWSKNGMKLYSGDS-QGKVVLTELDSR-QAFLSKSQEILSEDSE---------------IVQLDYLQSYLLVSTL 188 (726)
T ss_pred eEEEEEecccccEEeecCC-CceEEEEEechh-hhhccccceeeccCcc---------------eEEeecccceehHhhh
Confidence 4677788888888998886 577777777762 111100 00111111 1345666777766554
Q ss_pred CCCeEEEEEcCCCceEEEecCCCCC--ceEEEEeC-----CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-------
Q psy13635 196 GTDRIEVCRLEGTHRKVLVNTDLVE--PRAITLSP-----AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD------- 261 (357)
Q Consensus 196 ~~~~I~~~~~~g~~~~~~~~~~~~~--P~giavd~-----~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~------- 261 (357)
.. -..++.+-+....+....-.. +.|-.+-| ..-+||-+-.+ .++|.++.+|....+..-.
T Consensus 189 ~r--~~Lc~tE~eti~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG---~RlWead~~G~V~~Thqfk~ala~~p 263 (726)
T KOG3621|consen 189 TR--CILCQTEAETITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPG---LRLWEADFAGEVIKTHQFKDALARPP 263 (726)
T ss_pred hh--hheeecchhHHHHhcCCCcCCccccceEEeeccccCCCceEEEecCC---CceEEeecceeEEEeeehhhhhccCC
Confidence 32 122222222222222211112 33333332 22367777666 6899999888755443211
Q ss_pred ----------------------CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEE
Q psy13635 262 ----------------------RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYV 319 (357)
Q Consensus 262 ----------------------~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~l 319 (357)
.++.+....+. ...-|-|++.+ |+.++..-... .+-.++......++..++.|
T Consensus 264 ~p~i~~~s~esp~~~~~~~~~q~ls~~k~~~l~-~~~vLa~te~G---iyv~d~~~~~v-~l~se~~~DI~dVs~~~nei 338 (726)
T KOG3621|consen 264 APEIPIRSLESPNQRSLPSGTQHLSLSKSSTLH-SDRVLAWTEVG---IYVFDSNNSQV-YLWSEGGHDILDVSHCGNEI 338 (726)
T ss_pred CCcccCCCcCCccccCCCCCccccccceeEEee-cceEEEeecce---EEEEEeccceE-EEeecCCCceeEEeecCceE
Confidence 12223333332 22235666654 66665543322 23334566677778888888
Q ss_pred EEEeCCCCeEEEEeC
Q psy13635 320 YWTDWQRRSIDRVNK 334 (357)
Q Consensus 320 y~td~~~~~I~~~~~ 334 (357)
|+-.... .++.+..
T Consensus 339 FvL~~d~-~l~~~sv 352 (726)
T KOG3621|consen 339 FVLNLDR-GLKVESV 352 (726)
T ss_pred EEEecCC-ceeEEEe
Confidence 8876543 4444443
No 210
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=74.98 E-value=2.7 Score=25.33 Aligned_cols=20 Identities=30% Similarity=0.566 Sum_probs=16.4
Q ss_pred CCceEEEEecCCCEEEEEeCC
Q psy13635 264 GWPNGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 264 ~~P~giaid~~~~~lY~~d~~ 284 (357)
..|.+|++| .++++|++-..
T Consensus 13 ~~~~~IavD-~~GNiYv~G~T 32 (38)
T PF06739_consen 13 DYGNGIAVD-SNGNIYVTGYT 32 (38)
T ss_pred eeEEEEEEC-CCCCEEEEEee
Confidence 468999999 78899998644
No 211
>KOG0274|consensus
Probab=74.76 E-value=96 Score=31.02 Aligned_cols=241 Identities=10% Similarity=0.044 Sum_probs=132.6
Q ss_pred ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 67 IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 67 ~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
.......+++++.. .+.++++...+..++.-+...+. ...++... .-.+..++ ..+.+..+-+...+|.+.+.
T Consensus 246 ~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~---C~~~l~gh--~stv~~~~-~~~~~~~sgs~D~tVkVW~v 318 (537)
T KOG0274|consen 246 VGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGE---CTHSLQGH--TSSVRCLT-IDPFLLVSGSRDNTVKVWDV 318 (537)
T ss_pred cCCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCc---EEEEecCC--CceEEEEE-ccCceEeeccCCceEEEEec
Confidence 44566789999987 56677777777788887866553 23333311 22333444 45556666567788888888
Q ss_pred CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEE
Q psy13635 147 DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITL 226 (357)
Q Consensus 147 ~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giav 226 (357)
+......+...- ....+.+.++ +.+.++....+.|.+-+..-........+.-.....+++
T Consensus 319 ~n~~~l~l~~~h----------------~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~ 379 (537)
T KOG0274|consen 319 TNGACLNLLRGH----------------TGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIV 379 (537)
T ss_pred cCcceEEEeccc----------------cccEEEEEec---CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEe
Confidence 744333332111 1134555555 445555555567777666633332333334556778888
Q ss_pred eCCCCEEEEEeCCCCCCeEEEEecCCC-ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCC
Q psy13635 227 SPAHGYLFWSDWNEKRPKIERSLLNGG-ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINEN 305 (357)
Q Consensus 227 d~~~g~Ly~~d~~~~~~~I~~~~~dg~-~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~ 305 (357)
+.. ..+|=.... ..|..-++++. .....+........++.+ .++.+++....+.|..-|..-......+...
T Consensus 380 ~~~-~~~~Sgs~D---~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~---~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~ 452 (537)
T KOG0274|consen 380 DSE-NRLLSGSLD---TTIKVWDLRTKRKCIHTLQGHTSLVSSLLL---RDNFLVSSSADGTIKLWDAEEGECLRTLEGR 452 (537)
T ss_pred cCc-ceEEeeeec---cceEeecCCchhhhhhhhcCCccccccccc---ccceeEeccccccEEEeecccCceeeeeccC
Confidence 854 455544443 47777777766 333222222233355554 3566677766677777776444433344332
Q ss_pred CCceEEEEEEC--CEEEEEeCCCCeEEEEeCccCceeEE
Q psy13635 306 LPHVFGISLLG--DYVYWTDWQRRSIDRVNKITGNDREV 342 (357)
Q Consensus 306 ~~~p~gia~~~--~~ly~td~~~~~I~~~~~~~g~~~~~ 342 (357)
+-.++.... ....++....+++.-.+..+|+....
T Consensus 453 --~~~~v~~l~~~~~~il~s~~~~~~~l~dl~~~~~~~~ 489 (537)
T KOG0274|consen 453 --HVGGVSALALGKEEILCSSDDGSVKLWDLRSGTLIRT 489 (537)
T ss_pred --CcccEEEeecCcceEEEEecCCeeEEEecccCchhhh
Confidence 223333321 25555555566666666666665543
No 212
>KOG0293|consensus
Probab=74.46 E-value=81 Score=30.02 Aligned_cols=228 Identities=11% Similarity=0.086 Sum_probs=116.2
Q ss_pred EEEEeecCCCCeEEEEEe----------CCcEEEEEcCCCCcceEeccC-CCcEEEEEEEccCCEEEEEeCCCCeEEEEE
Q psy13635 31 FWYALSHHVAAQMLLFAT----------SKDIRIANLSRPLKPVTIIKD-LEEGAAIDYYYKKSMVCWTDHGTEMISCCT 99 (357)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~----------~~~i~~~~~~~~~~~~~~~~~-~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~ 99 (357)
..-+++++.+..++.++- ...++.-|++.+........+ ...+...++-|+ +.=+++...++.|...+
T Consensus 262 ~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pD-g~~~V~Gs~dr~i~~wd 340 (519)
T KOG0293|consen 262 KKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPD-GFRFVTGSPDRTIIMWD 340 (519)
T ss_pred eeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccC-CceeEecCCCCcEEEec
Confidence 334455555555555543 233556666664332222222 235666777764 44477878888999999
Q ss_pred cCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCc
Q psy13635 100 FDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPD 179 (357)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~ 179 (357)
+||......+-+ .......+|+-..+..++.... ..+|.-++......+-++... ....
T Consensus 341 lDgn~~~~W~gv---r~~~v~dlait~Dgk~vl~v~~-d~~i~l~~~e~~~dr~lise~-----------------~~it 399 (519)
T KOG0293|consen 341 LDGNILGNWEGV---RDPKVHDLAITYDGKYVLLVTV-DKKIRLYNREARVDRGLISEE-----------------QPIT 399 (519)
T ss_pred CCcchhhccccc---ccceeEEEEEcCCCcEEEEEec-ccceeeechhhhhhhcccccc-----------------Ccee
Confidence 999853211111 1134567888777888887763 456665554433222122111 1234
Q ss_pred eEEEeCCCCeEEEEeCCCCeEEEEEcCCCc----------eEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 180 GVAVDWVARNLYWTDTGTDRIEVCRLEGTH----------RKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 180 glavD~~~~~lY~td~~~~~I~~~~~~g~~----------~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
.+.+. .++++..++-..+.|.--|+.-.. ..-++.+.+..- ..-|++...+ .++|+--+
T Consensus 400 s~~iS-~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~---------~~~fiaSGSE-D~kvyIWh 468 (519)
T KOG0293|consen 400 SFSIS-KDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGG---------NDKFIASGSE-DSKVYIWH 468 (519)
T ss_pred EEEEc-CCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCC---------CcceEEecCC-CceEEEEE
Confidence 45555 566777777666666666654111 011111111110 0122222222 13444444
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEE
Q psy13635 250 LNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 250 ~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~ 291 (357)
...+.....++......+.++-.|.+.+.+-+....+.|+.-
T Consensus 469 r~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIW 510 (519)
T KOG0293|consen 469 RISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIW 510 (519)
T ss_pred ccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEe
Confidence 444444444444445566777776666666665555555444
No 213
>KOG1445|consensus
Probab=73.88 E-value=1e+02 Score=31.05 Aligned_cols=195 Identities=12% Similarity=0.059 Sum_probs=109.7
Q ss_pred cEEEEEEEc-cCCEEEEE-eCCCCeEEEEEcCCCCcc--eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 72 EGAAIDYYY-KKSMVCWT-DHGTEMISCCTFDGNNVG--SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 72 ~~~~i~~d~-~~~~ly~~-d~~~~~I~~~~~~g~~~~--~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
....+.+|| +..+|-++ |.+.=.|+|+..+|.... ..+.++..+......|-+++..-.+.-+.+.+.+|...++.
T Consensus 629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~ 708 (1012)
T KOG1445|consen 629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLA 708 (1012)
T ss_pred eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehh
Confidence 345555555 33455554 333346788888877521 12335555566777777777766666666667788877765
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEe
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLS 227 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd 227 (357)
......-+. .-..+..|+|-.+.+ +...+-...++|+++++......+- ....|.|
T Consensus 709 ~~~~~~~l~----------------gHtdqIf~~AWSpdG-r~~AtVcKDg~~rVy~Prs~e~pv~---Eg~gpvg---- 764 (1012)
T KOG1445|consen 709 NAKLYSRLV----------------GHTDQIFGIAWSPDG-RRIATVCKDGTLRVYEPRSREQPVY---EGKGPVG---- 764 (1012)
T ss_pred hhhhhheec----------------cCcCceeEEEECCCC-cceeeeecCceEEEeCCCCCCCccc---cCCCCcc----
Confidence 432211111 111245677777544 4444555567888887775543322 1234544
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCCCceEEEee---CCCC-Cc---eEE---------EEecCCCEEEEEeCCCCeEEEE
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK---DRLG-WP---NGI---------TLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~---~~l~-~P---~gi---------aid~~~~~lY~~d~~~~~I~~~ 291 (357)
....+|.|+..+ ..|....+|....+.+.- +.+. .| .+| -.|++.+.||++-.+...|..+
T Consensus 765 tRgARi~wacdg---r~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~y 841 (1012)
T KOG1445|consen 765 TRGARILWACDG---RIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMY 841 (1012)
T ss_pred CcceeEEEEecC---cEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEE
Confidence 234577777766 366666666544333211 1111 11 111 2477788899998888888887
Q ss_pred eC
Q psy13635 292 DF 293 (357)
Q Consensus 292 ~~ 293 (357)
..
T Consensus 842 Ev 843 (1012)
T KOG1445|consen 842 EV 843 (1012)
T ss_pred Ee
Confidence 65
No 214
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=73.86 E-value=54 Score=27.72 Aligned_cols=93 Identities=8% Similarity=-0.071 Sum_probs=56.7
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC-CCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH-GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 127 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~ 127 (357)
...|.+++..+.....+....-.....+++.|.++++.+... ....|.-.+.++.. ...+ +-.....+.++|.
T Consensus 38 ~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~----i~~~--~~~~~n~i~wsP~ 111 (194)
T PF08662_consen 38 EFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKK----IFSF--GTQPRNTISWSPD 111 (194)
T ss_pred eEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcccE----eEee--cCCCceEEEECCC
Confidence 335777766553333333344445899999999888866633 33466666665432 2222 2234557889987
Q ss_pred CCeEEEEeCC--CCEEEEEEcC
Q psy13635 128 TEKLYWTDSE--TNKLEVSSLD 147 (357)
Q Consensus 128 ~~~ly~td~~--~~~I~~~~~~ 147 (357)
++.|..+..+ .+.|...+.+
T Consensus 112 G~~l~~~g~~n~~G~l~~wd~~ 133 (194)
T PF08662_consen 112 GRFLVLAGFGNLNGDLEFWDVR 133 (194)
T ss_pred CCEEEEEEccCCCcEEEEEECC
Confidence 7777777643 4677777776
No 215
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=73.75 E-value=96 Score=30.53 Aligned_cols=61 Identities=10% Similarity=0.037 Sum_probs=32.6
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEE-EeCC------cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNV-ITNG------LITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~------~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
++++|+.+.. +.++.++...... .... .... .....++++. ..+.+|+.+. .+.|+.++.+
T Consensus 61 ~g~vy~~~~~-g~l~AlD~~tG~~--~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~-~g~v~AlD~~ 128 (488)
T cd00216 61 DGDMYFTTSH-SALFALDAATGKV--LWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTF-DGRLVALDAE 128 (488)
T ss_pred CCEEEEeCCC-CcEEEEECCCChh--hceeCCCCCccccccccccCCcEEc-cCCeEEEecC-CCeEEEEECC
Confidence 6788887654 6788888754421 1111 1111 0011234443 1378887764 5678888764
No 216
>KOG3914|consensus
Probab=72.94 E-value=85 Score=29.56 Aligned_cols=156 Identities=14% Similarity=0.187 Sum_probs=90.7
Q ss_pred CceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce--EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 118 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR--KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
.|..+...+.++.|+.++.. .+...+..+++.. +.+-...+ -..|+.+.++...-.+-++|.
T Consensus 64 a~~~~~~s~~~~llAv~~~~-K~~~~f~~~~~~~~~kl~~~~~v---------------~~~~~ai~~~~~~~sv~v~dk 127 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSS-KQRAVFDYRENPKGAKLLDVSCV---------------PKRPTAISFIREDTSVLVADK 127 (390)
T ss_pred cccccccCCCceEEEEEeCC-CceEEEEEecCCCcceeeeEeec---------------ccCcceeeeeeccceEEEEee
Confidence 34445555555666666654 4444455544432 11111111 125777777766667777776
Q ss_pred CCC--eEEEEEcC-CCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE-EeeCCCCCceEEEE
Q psy13635 196 GTD--RIEVCRLE-GTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL-LVKDRLGWPNGITL 271 (357)
Q Consensus 196 ~~~--~I~~~~~~-g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~-~~~~~l~~P~giai 271 (357)
..+ .+...+.+ |..+.++ +.+..-..+++.|+..+|..+|..+ +|+.....+..... +....-.....|++
T Consensus 128 agD~~~~di~s~~~~~~~~~l--GhvSml~dVavS~D~~~IitaDRDE---kIRvs~ypa~f~IesfclGH~eFVS~isl 202 (390)
T KOG3914|consen 128 AGDVYSFDILSADSGRCEPIL--GHVSMLLDVAVSPDDQFIITADRDE---KIRVSRYPATFVIESFCLGHKEFVSTISL 202 (390)
T ss_pred cCCceeeeeecccccCcchhh--hhhhhhheeeecCCCCEEEEecCCc---eEEEEecCcccchhhhccccHhheeeeee
Confidence 654 33333333 4433333 3456788999999988999999884 78877777653322 11112234556777
Q ss_pred ecCCCEEEEEeCCCCeEEEEeC-CCC
Q psy13635 272 DVDNEKLYWCDAKTDKIEMIDF-DGN 296 (357)
Q Consensus 272 d~~~~~lY~~d~~~~~I~~~~~-dG~ 296 (357)
..+++.|+-.+.+.++.-+. .|.
T Consensus 203 --~~~~~LlS~sGD~tlr~Wd~~sgk 226 (390)
T KOG3914|consen 203 --TDNYLLLSGSGDKTLRLWDITSGK 226 (390)
T ss_pred --ccCceeeecCCCCcEEEEecccCC
Confidence 46677888888888888776 344
No 217
>KOG0269|consensus
Probab=72.88 E-value=1.2e+02 Score=31.27 Aligned_cols=163 Identities=12% Similarity=0.063 Sum_probs=101.2
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC-C-----cCCceeEEEEcCCCeEEEEeCCCCEEEEEE
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-G-----LITPDGLAIDWLTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-~-----~~~p~glavd~~~~~ly~td~~~~~I~~~~ 145 (357)
...+|........|-++....-+|+.++.++... ..... + +.+...+.......++..|-..++.|.+.+
T Consensus 41 ~~nAIs~nr~~~qiv~AGrs~lklyai~~~~~~~----~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWd 116 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGRSLLKLYAINPNDFSE----KCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWD 116 (839)
T ss_pred ccceEeecCCcceeEEecccceeeEeeCcccCCc----ceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEe
Confidence 4556666677777888777777788777776641 11111 0 111111222212234445556678888888
Q ss_pred cCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEE
Q psy13635 146 LDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAIT 225 (357)
Q Consensus 146 ~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~gia 225 (357)
++-..+.-....--+.. ...+.+.+....-++.++....+.|-..|+.-+..........+..+++.
T Consensus 117 lnk~~rnk~l~~f~EH~-------------Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~ 183 (839)
T KOG0269|consen 117 LNKSIRNKLLTVFNEHE-------------RSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVK 183 (839)
T ss_pred cCccccchhhhHhhhhc-------------cceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhcee
Confidence 76532221110000111 24566778888889999999888999988886665555555678899999
Q ss_pred EeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 226 LSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 226 vd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
+.|..+..|.+-... +.+...++.-.
T Consensus 184 fsp~~~~~F~s~~ds--G~lqlWDlRqp 209 (839)
T KOG0269|consen 184 FSPGYGNKFASIHDS--GYLQLWDLRQP 209 (839)
T ss_pred eccCCCceEEEecCC--ceEEEeeccCc
Confidence 999988888887763 57777776544
No 218
>KOG0308|consensus
Probab=70.06 E-value=1.3e+02 Score=30.44 Aligned_cols=228 Identities=11% Similarity=0.083 Sum_probs=122.0
Q ss_pred eEEEEEeCCcEEEEEcCCCC--cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc--c---eeEE---E
Q psy13635 42 QMLLFATSKDIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV--G---SKHN---V 111 (357)
Q Consensus 42 ~~l~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~---~~~~---~ 111 (357)
.++-.+++..|...+..... -...+-..-.....+++-..++.++.+..-+++|+..+++.... + +..+ .
T Consensus 87 tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl 166 (735)
T KOG0308|consen 87 TLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSL 166 (735)
T ss_pred ceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccC
Confidence 34444455566666654421 11112223334567777666788888888889999999885521 0 0001 1
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEE
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLY 191 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY 191 (357)
....-....++|... ++.++++-.-.+-|+..+........-... --.....|.++..+.++.
T Consensus 167 ~sG~k~siYSLA~N~-t~t~ivsGgtek~lr~wDprt~~kimkLrG----------------HTdNVr~ll~~dDGt~~l 229 (735)
T KOG0308|consen 167 GSGPKDSIYSLAMNQ-TGTIIVSGGTEKDLRLWDPRTCKKIMKLRG----------------HTDNVRVLLVNDDGTRLL 229 (735)
T ss_pred CCCCccceeeeecCC-cceEEEecCcccceEEeccccccceeeeec----------------cccceEEEEEcCCCCeEe
Confidence 111123345667663 556766666566666666543322111111 112445566664444444
Q ss_pred EEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCc-eEEE
Q psy13635 192 WTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWP-NGIT 270 (357)
Q Consensus 192 ~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P-~gia 270 (357)
+....+.|..-++.-..........-+....+..+|.-..+|..+.. +.|++.++..-...+++-.. ..| ..+.
T Consensus 230 -s~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd---~~i~~Tdl~n~~~~tlick~-daPv~~l~ 304 (735)
T KOG0308|consen 230 -SASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRD---GNIYRTDLRNPAKSTLICKE-DAPVLKLH 304 (735)
T ss_pred -ecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCC---CcEEecccCCchhheEeecC-CCchhhhh
Confidence 55556777777776554332222233457888888887889988876 68999998874333333222 122 3344
Q ss_pred EecCCCEEEEEeCCCCeEEEEe
Q psy13635 271 LDVDNEKLYWCDAKTDKIEMID 292 (357)
Q Consensus 271 id~~~~~lY~~d~~~~~I~~~~ 292 (357)
++..++.+ |+-.....|.+..
T Consensus 305 ~~~~~~~~-WvtTtds~I~rW~ 325 (735)
T KOG0308|consen 305 LHEHDNSV-WVTTTDSSIKRWK 325 (735)
T ss_pred hccccCCc-eeeeccccceecC
Confidence 43334444 5544555665554
No 219
>KOG0307|consensus
Probab=70.03 E-value=75 Score=33.98 Aligned_cols=208 Identities=14% Similarity=0.093 Sum_probs=112.9
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc---CCceeEEEEcCCCeEEEEeCCCCEEEEEE
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL---ITPDGLAIDWLTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~---~~p~glavd~~~~~ly~td~~~~~I~~~~ 145 (357)
.-+...|++|.+.++.+.=+...++.|+-.+++-... ....... ..+..|+-.-.-..|+-+-..++++...+
T Consensus 115 h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~t----P~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWD 190 (1049)
T KOG0307|consen 115 HTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPET----PFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWD 190 (1049)
T ss_pred cCCceeeeeccccCCceeeccCCCCcEEEeccCCcCC----CCCCCCCCCcccceEeccchhhhHHhhccCCCCCceecc
Confidence 3456789999999998888888889999999887531 1111122 22333333333344666666677888888
Q ss_pred cCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC---eEEEEEcCC--CceEEEecCCCCC
Q psy13635 146 LDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD---RIEVCRLEG--THRKVLVNTDLVE 220 (357)
Q Consensus 146 ~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~---~I~~~~~~g--~~~~~~~~~~~~~ 220 (357)
+..+.. ++--+... +| ....+|+-+|.+-.-.++-.+.+ .|..-|+.- .-.+++ ...-..
T Consensus 191 lr~~~p-ii~ls~~~-~~------------~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~-~~H~~G 255 (1049)
T KOG0307|consen 191 LRKKKP-IIKLSDTP-GR------------MHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKIL-EGHQRG 255 (1049)
T ss_pred ccCCCc-ccccccCC-Cc------------cceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhh-cccccc
Confidence 876622 22111110 00 13456666665554444444333 333333321 112222 122234
Q ss_pred ceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 221 PRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 221 P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
.-++..++.+.++..+.... ++|..-+.+.+...--+.....+-..+...+.+-.++-+.+-.|+|....+.|..
T Consensus 256 ilslsWc~~D~~lllSsgkD--~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 256 ILSLSWCPQDPRLLLSSGKD--NRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eeeeccCCCCchhhhcccCC--CCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 55566666655666666553 4777777765433322333445555566655555565555666777777776654
No 220
>KOG1524|consensus
Probab=69.44 E-value=1.2e+02 Score=29.95 Aligned_cols=52 Identities=6% Similarity=-0.064 Sum_probs=34.9
Q ss_pred CEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC
Q psy13635 83 SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET 138 (357)
Q Consensus 83 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~ 138 (357)
|.=..+...++.|...+-.|-- +.++...-.....++.+|.+.++.++..+.
T Consensus 116 GtgLlt~GEDG~iKiWSrsGML----RStl~Q~~~~v~c~~W~p~S~~vl~c~g~h 167 (737)
T KOG1524|consen 116 GAGLLTAGEDGVIKIWSRSGML----RSTVVQNEESIRCARWAPNSNSIVFCQGGH 167 (737)
T ss_pred CceeeeecCCceEEEEeccchH----HHHHhhcCceeEEEEECCCCCceEEecCCe
Confidence 4444555566677766666654 444554555678889999999999988653
No 221
>PHA02713 hypothetical protein; Provisional
Probab=67.90 E-value=1.4e+02 Score=30.02 Aligned_cols=143 Identities=12% Similarity=0.070 Sum_probs=79.2
Q ss_pred CCCeEEEEeCCC-----CeEEEEEcCCCceEEEecCCCCCce---EEEEeCCCCEEEEEeCCCC----------------
Q psy13635 186 VARNLYWTDTGT-----DRIEVCRLEGTHRKVLVNTDLVEPR---AITLSPAHGYLFWSDWNEK---------------- 241 (357)
Q Consensus 186 ~~~~lY~td~~~-----~~I~~~~~~g~~~~~~~~~~~~~P~---giavd~~~g~Ly~~d~~~~---------------- 241 (357)
.+++||+..... ..+++.++....=..+. .+..|. +.+.- +|+||+.-....
T Consensus 350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~--~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~ 425 (557)
T PHA02713 350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLP--DMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDME 425 (557)
T ss_pred ECCEEEEECCcCCCCCCceEEEEECCCCeEEECC--CCCcccccccEEEE--CCEEEEEeCCCccccccccccccccccc
Confidence 468999886543 35888887754322221 222222 22222 599999753211
Q ss_pred -----CCeEEEEecCCCceEEEeeCCCCC---ceEEEEecCCCEEEEEeCCC------CeEEEEeCCC-CCeEEEecCCC
Q psy13635 242 -----RPKIERSLLNGGERVLLVKDRLGW---PNGITLDVDNEKLYWCDAKT------DKIEMIDFDG-NNRRELINENL 306 (357)
Q Consensus 242 -----~~~I~~~~~dg~~~~~~~~~~l~~---P~giaid~~~~~lY~~d~~~------~~I~~~~~dG-~~~~~i~~~~~ 306 (357)
...+++.++.... ...+. .+.. ..++++ .+++||+.-... ..+.++|++. ..=+.+ . .+
T Consensus 426 ~~~~~~~~ve~YDP~td~-W~~v~-~m~~~r~~~~~~~--~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~-~-~m 499 (557)
T PHA02713 426 EDTHSSNKVIRYDTVNNI-WETLP-NFWTGTIRPGVVS--HKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELI-T-TT 499 (557)
T ss_pred ccccccceEEEECCCCCe-EeecC-CCCcccccCcEEE--ECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEc-c-cc
Confidence 1246666665432 22221 2222 234554 579999985321 3477888876 332222 2 34
Q ss_pred Cce---EEEEEECCEEEEEeCCCC--eEEEEeCccCc
Q psy13635 307 PHV---FGISLLGDYVYWTDWQRR--SIDRVNKITGN 338 (357)
Q Consensus 307 ~~p---~gia~~~~~ly~td~~~~--~I~~~~~~~g~ 338 (357)
+.| .|+++.+|.||+.--..+ .+.++|..+.+
T Consensus 500 ~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 500 ESRLSALHTILHDNTIMMLHCYESYMLQDTFNVYTYE 536 (557)
T ss_pred CcccccceeEEECCEEEEEeeecceeehhhcCccccc
Confidence 433 578888999999865444 57777775444
No 222
>KOG1538|consensus
Probab=67.43 E-value=1.5e+02 Score=30.23 Aligned_cols=263 Identities=11% Similarity=0.038 Sum_probs=131.9
Q ss_pred ecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEE--EcCCCCcceeEEEEe
Q psy13635 36 SHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCC--TFDGNNVGSKHNVIT 113 (357)
Q Consensus 36 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~--~~~g~~~~~~~~~~~ 113 (357)
+-.++..-|+.+..+.+..+|...+.-...+-..-....-+++.. +|+.|-+...+..+... .+.|. +--
T Consensus 19 afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKDtVycVAys~-dGkrFASG~aDK~VI~W~~klEG~-------LkY 90 (1081)
T KOG1538|consen 19 AFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAK-DGKRFASGSADKSVIIWTSKLEGI-------LKY 90 (1081)
T ss_pred EECCCCceEEEecCCEEEEEeCCCcccccccccccceEEEEEEcc-CCceeccCCCceeEEEecccccce-------eee
Confidence 334455568888888899999876544444444444567788875 56666655554433222 22222 111
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
+.-.....+.++|.+..|--+.-+. +-+.....+.+.. ........+.+-. .+|..+.-
T Consensus 91 SH~D~IQCMsFNP~~h~LasCsLsd-----FglWS~~qK~V~K---------------~kss~R~~~CsWt-nDGqylal 149 (1081)
T KOG1538|consen 91 SHNDAIQCMSFNPITHQLASCSLSD-----FGLWSPEQKSVSK---------------HKSSSRIICCSWT-NDGQYLAL 149 (1081)
T ss_pred ccCCeeeEeecCchHHHhhhcchhh-----ccccChhhhhHHh---------------hhhheeEEEeeec-CCCcEEEE
Confidence 1122345566666555543222111 0011100000000 0000122233332 23444455
Q ss_pred eCCCCeEEEEEcCCCceEEEecC-C-CCCceEEEEeCCCC-----EEEEEeCCCCCCeEEEEecCCCceEEEeeCCC-CC
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLVNT-D-LVEPRAITLSPAHG-----YLFWSDWNEKRPKIERSLLNGGERVLLVKDRL-GW 265 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~~~-~-~~~P~giavd~~~g-----~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l-~~ 265 (357)
...+++|..-+..|+....+-.. + -....+|+.+|..| .+-++||+ ..+.-..++|.....- ..+ ..
T Consensus 150 G~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~---qTLSFy~LsG~~Igk~--r~L~Fd 224 (1081)
T KOG1538|consen 150 GMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWG---QTLSFYQLSGKQIGKD--RALNFD 224 (1081)
T ss_pred eccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEecc---ceeEEEEecceeeccc--ccCCCC
Confidence 56677888778777765444332 2 23446888888654 67788887 3677777777643321 111 35
Q ss_pred ceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC-CEEEEEeCCCCeEEEEeC
Q psy13635 266 PNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLG-DYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 266 P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~-~~ly~td~~~~~I~~~~~ 334 (357)
|..|..-+.+..+.+-- ..+.+..+..+|-..-++. +.-.....+++.. +.-|..--..|+|.+++.
T Consensus 225 P~CisYf~NGEy~LiGG-sdk~L~~fTR~GvrLGTvg-~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 225 PCCISYFTNGEYILLGG-SDKQLSLFTRDGVRLGTVG-EQDSWIWTVQAKPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred chhheeccCCcEEEEcc-CCCceEEEeecCeEEeecc-ccceeEEEEEEccCCceEEEEEccCeeehhhh
Confidence 77777654455544432 3445566666665443332 2333455555553 333333334456655554
No 223
>KOG3881|consensus
Probab=66.22 E-value=1.1e+02 Score=28.90 Aligned_cols=110 Identities=15% Similarity=0.118 Sum_probs=69.0
Q ss_pred CCceEEEeCC-CCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCc-eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCc
Q psy13635 177 HPDGVAVDWV-ARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEP-RAITLSPAHGYLFWSDWNEKRPKIERSLLNGGE 254 (357)
Q Consensus 177 ~p~glavD~~-~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P-~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~ 254 (357)
++.++.+=+. ..+-|.|-...+.+..+|..-..+.+....-.++| ..+++.|....||+++.. +.+..+++.+..
T Consensus 204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~---g~l~~FD~r~~k 280 (412)
T KOG3881|consen 204 WITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTK---GQLAKFDLRGGK 280 (412)
T ss_pred eeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEeccc---chhheecccCce
Confidence 5666666321 25777888888888888887444433333333444 678899998899999987 578777776654
Q ss_pred eEEE-eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEE
Q psy13635 255 RVLL-VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 255 ~~~~-~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~ 291 (357)
..-. +......+.+|..++ +.. |.+..+-.+..|+
T Consensus 281 l~g~~~kg~tGsirsih~hp-~~~-~las~GLDRyvRI 316 (412)
T KOG3881|consen 281 LLGCGLKGITGSIRSIHCHP-THP-VLASCGLDRYVRI 316 (412)
T ss_pred eeccccCCccCCcceEEEcC-CCc-eEEeeccceeEEE
Confidence 4332 223345678888873 333 4455555554444
No 224
>KOG0646|consensus
Probab=64.98 E-value=1.4e+02 Score=28.86 Aligned_cols=196 Identities=16% Similarity=0.109 Sum_probs=103.1
Q ss_pred EEeecCCCCeEEEEE-eCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEc------CCCCc
Q psy13635 33 YALSHHVAAQMLLFA-TSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTF------DGNNV 105 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~------~g~~~ 105 (357)
-|++.++..-||+.. -..+|...-+..+.=.......-....-+.|. .++..+++...++.|....+ +....
T Consensus 85 ~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs-~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~ 163 (476)
T KOG0646|consen 85 HALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFS-DDGSHIITGSKDGAVLVWLLTDLVSADNDHS 163 (476)
T ss_pred eeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEe-CCCcEEEecCCCccEEEEEEEeecccccCCC
Confidence 455666444455444 35667776666543333334455556667776 46777788777776654332 22211
Q ss_pred ceeEEEEeCCcCCceeEEEEcC--CCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEE
Q psy13635 106 GSKHNVITNGLITPDGLAIDWL--TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAV 183 (357)
Q Consensus 106 ~~~~~~~~~~~~~p~glavd~~--~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glav 183 (357)
+.......+.--....+-++.- ..+|| |.+.+..+...++.+...-.-+..+ ..+..+++
T Consensus 164 ~~p~~~f~~HtlsITDl~ig~Gg~~~rl~-TaS~D~t~k~wdlS~g~LLlti~fp-----------------~si~av~l 225 (476)
T KOG0646|consen 164 VKPLHIFSDHTLSITDLQIGSGGTNARLY-TASEDRTIKLWDLSLGVLLLTITFP-----------------SSIKAVAL 225 (476)
T ss_pred ccceeeeccCcceeEEEEecCCCccceEE-EecCCceEEEEEeccceeeEEEecC-----------------CcceeEEE
Confidence 1223333333333445555432 23344 4445667777777655332211111 25788999
Q ss_pred eCCCCeEEEEeCCCCeEEEEEcCCCc-----------------eEEEecC-CCCCceEEEEeCCCCEEEEEeCCCCCCeE
Q psy13635 184 DWVARNLYWTDTGTDRIEVCRLEGTH-----------------RKVLVNT-DLVEPRAITLSPAHGYLFWSDWNEKRPKI 245 (357)
Q Consensus 184 D~~~~~lY~td~~~~~I~~~~~~g~~-----------------~~~~~~~-~~~~P~giavd~~~g~Ly~~d~~~~~~~I 245 (357)
||....+|+-.. .+.|+..++.+.. ...+... +-.....+|++.+ |.|..+-... +++
T Consensus 226 Dpae~~~yiGt~-~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~D-gtlLlSGd~d--g~V 301 (476)
T KOG0646|consen 226 DPAERVVYIGTE-EGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTD-GTLLLSGDED--GKV 301 (476)
T ss_pred cccccEEEecCC-cceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecC-ccEEEeeCCC--CCE
Confidence 999988886544 4678777654322 1222211 1135677888854 6666654442 355
Q ss_pred EEEecC
Q psy13635 246 ERSLLN 251 (357)
Q Consensus 246 ~~~~~d 251 (357)
...+.-
T Consensus 302 cvWdi~ 307 (476)
T KOG0646|consen 302 CVWDIY 307 (476)
T ss_pred EEEecc
Confidence 544443
No 225
>KOG1517|consensus
Probab=64.71 E-value=2.1e+02 Score=30.97 Aligned_cols=178 Identities=9% Similarity=-0.002 Sum_probs=98.7
Q ss_pred CCCeEEEEEe-CCcEEEEEcCCCCcceE-eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc
Q psy13635 39 VAAQMLLFAT-SKDIRIANLSRPLKPVT-IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL 116 (357)
Q Consensus 39 ~~~~~l~~~~-~~~i~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 116 (357)
+...+|+.+. .+.|++-|++.+....- +...-.-+.++.-+..++.+..+...+|.+..++..-..............
T Consensus 1175 Q~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~ 1254 (1387)
T KOG1517|consen 1175 QQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHN 1254 (1387)
T ss_pred hhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccC
Confidence 3455677766 45678889877322221 223444577787777788999999999988877654332100011111111
Q ss_pred C--CceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 117 I--TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 117 ~--~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
. ...++.+-..+-.=.++-+.+|.|+..++.+...+....... ++ +-...-..+.|. ..-.++-+.
T Consensus 1255 ~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~--~~---------~yGs~lTal~VH-~hapiiAsG 1322 (1387)
T KOG1517|consen 1255 DVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVA--HW---------EYGSALTALTVH-EHAPIIASG 1322 (1387)
T ss_pred CcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeee--cc---------ccCccceeeeec-cCCCeeeec
Confidence 1 134555553121124566678899999888753333221110 00 000024556776 344666665
Q ss_pred CCCCeEEEEEcCCCceEEEecC------CCCCceEEEEeCC
Q psy13635 195 TGTDRIEVCRLEGTHRKVLVNT------DLVEPRAITLSPA 229 (357)
Q Consensus 195 ~~~~~I~~~~~~g~~~~~~~~~------~~~~P~giavd~~ 229 (357)
.. ..|...+..|.....+... ....+..++++|.
T Consensus 1323 s~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~ 1362 (1387)
T KOG1517|consen 1323 SA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPH 1362 (1387)
T ss_pred Cc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecch
Confidence 55 7888899998776554431 2345567777764
No 226
>KOG0649|consensus
Probab=64.32 E-value=84 Score=27.80 Aligned_cols=80 Identities=10% Similarity=0.069 Sum_probs=50.7
Q ss_pred CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC-CEEEEEeCCCCeEEEEeCccCceeE
Q psy13635 263 LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLG-DYVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 263 l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~-~~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
....+.+-+||.++.|+.+- +.+.++..++.....+....+.......++--+ ..=..+-...|+++.-+..+++.++
T Consensus 114 vPeINam~ldP~enSi~~Ag-GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~ 192 (325)
T KOG0649|consen 114 VPEINAMWLDPSENSILFAG-GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVS 192 (325)
T ss_pred CCccceeEeccCCCcEEEec-CCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeE
Confidence 44568999999999999887 788999999865444444444444444444421 2223344455666666655666666
Q ss_pred EE
Q psy13635 342 VI 343 (357)
Q Consensus 342 ~i 343 (357)
+|
T Consensus 193 ~i 194 (325)
T KOG0649|consen 193 MI 194 (325)
T ss_pred Ee
Confidence 55
No 227
>KOG2055|consensus
Probab=63.83 E-value=1.4e+02 Score=28.76 Aligned_cols=190 Identities=11% Similarity=0.090 Sum_probs=91.0
Q ss_pred EEeecCCCCeEEEEEeC-CcEEEEEcCCCCcceEecc-CCCcEE-EEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeE
Q psy13635 33 YALSHHVAAQMLLFATS-KDIRIANLSRPLKPVTIIK-DLEEGA-AIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKH 109 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~-~~~~~~-~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 109 (357)
.++.-++..|.|+.+.- +.++.+.++|..+..+..- --+.|+ ...|.+.+....++.....-++..++.... .
T Consensus 217 ~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak----~ 292 (514)
T KOG2055|consen 217 TSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK----V 292 (514)
T ss_pred eEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc----c
Confidence 34555677888888874 4567777777433322211 122233 334555444243444444556666665442 1
Q ss_pred EEEe--CCc--CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC-ceEEEEecCCCCcceeeeeccCcccccCCceEEEe
Q psy13635 110 NVIT--NGL--ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK-KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVD 184 (357)
Q Consensus 110 ~~~~--~~~--~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~-~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD 184 (357)
..+. .+. ..-+-.+|.+.++.| .....++.|........ ....+--. ....+++++
T Consensus 293 ~k~~~~~g~e~~~~e~FeVShd~~fi-a~~G~~G~I~lLhakT~eli~s~Kie------------------G~v~~~~fs 353 (514)
T KOG2055|consen 293 TKLKPPYGVEEKSMERFEVSHDSNFI-AIAGNNGHIHLLHAKTKELITSFKIE------------------GVVSDFTFS 353 (514)
T ss_pred ccccCCCCcccchhheeEecCCCCeE-EEcccCceEEeehhhhhhhhheeeec------------------cEEeeEEEe
Confidence 1111 111 123444565544433 23444566666554322 11111111 134567777
Q ss_pred CCCCeEEEEeCCCCeEEEEEcCCCceE-EEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 185 WVARNLYWTDTGTDRIEVCRLEGTHRK-VLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 185 ~~~~~lY~td~~~~~I~~~~~~g~~~~-~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
..+ +..|+..+.+.|++.++.-.... ....++.-+-..+++++. |. |++..... +.+-..+
T Consensus 354 Sds-k~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~n-g~-ylA~GS~~-GiVNIYd 415 (514)
T KOG2055|consen 354 SDS-KELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLN-GS-YLATGSDS-GIVNIYD 415 (514)
T ss_pred cCC-cEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCC-Cc-eEEeccCc-ceEEEec
Confidence 444 44455555678888887765332 233333334445555543 44 55544332 4554444
No 228
>KOG0278|consensus
Probab=62.88 E-value=1.1e+02 Score=27.16 Aligned_cols=152 Identities=6% Similarity=0.007 Sum_probs=79.5
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR 151 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~ 151 (357)
....+-+-..+..| .+...++.|+-.+..... +.+++.. -..+.++.+...++.|-+++. +.|.-.+.+.-
T Consensus 145 ~Ir~v~wc~eD~~i-LSSadd~tVRLWD~rTgt--~v~sL~~--~s~VtSlEvs~dG~ilTia~g--ssV~Fwdaksf-- 215 (334)
T KOG0278|consen 145 GIRTVLWCHEDKCI-LSSADDKTVRLWDHRTGT--EVQSLEF--NSPVTSLEVSQDGRILTIAYG--SSVKFWDAKSF-- 215 (334)
T ss_pred cceeEEEeccCceE-EeeccCCceEEEEeccCc--EEEEEec--CCCCcceeeccCCCEEEEecC--ceeEEeccccc--
Confidence 34444444434444 344556667766665443 1122222 245778888875555554443 33443333221
Q ss_pred EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEe-cCCCCCceEEEEeCCC
Q psy13635 152 KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLV-NTDLVEPRAITLSPAH 230 (357)
Q Consensus 152 ~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~-~~~~~~P~giavd~~~ 230 (357)
..+-+ ..-|. ..+.-.+.|.. .+|++......++++|.+........ .+.......+.+.|.
T Consensus 216 ~~lKs--~k~P~-------------nV~SASL~P~k-~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPd- 278 (334)
T KOG0278|consen 216 GLLKS--YKMPC-------------NVESASLHPKK-EFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPD- 278 (334)
T ss_pred cceee--ccCcc-------------ccccccccCCC-ceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCC-
Confidence 11110 01111 11222344444 88999888889999998855444443 344445568888885
Q ss_pred CEEEEEeCCCCCCeEEEEe
Q psy13635 231 GYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 231 g~Ly~~d~~~~~~~I~~~~ 249 (357)
|.+|-+-+....-+||...
T Consensus 279 GE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 279 GELYASGSEDGTIRLWQTT 297 (334)
T ss_pred CceeeccCCCceEEEEEec
Confidence 8999886653222444443
No 229
>KOG1273|consensus
Probab=61.98 E-value=1.3e+02 Score=27.66 Aligned_cols=179 Identities=11% Similarity=0.001 Sum_probs=97.6
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCC-ceeEEEEcC
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT-PDGLAIDWL 127 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~-p~glavd~~ 127 (357)
...+.+.|+++-.....+.........+.+++ .|+...+...+..|...++-.+.+. ..+. +.+ ..+..+.|.
T Consensus 44 nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~-dgr~LltsS~D~si~lwDl~~gs~l--~rir---f~spv~~~q~hp~ 117 (405)
T KOG1273|consen 44 NGRVVIYDFDTFRIARMLSAHVRPITSLCWSR-DGRKLLTSSRDWSIKLWDLLKGSPL--KRIR---FDSPVWGAQWHPR 117 (405)
T ss_pred CCcEEEEEccccchhhhhhccccceeEEEecC-CCCEeeeecCCceeEEEeccCCCce--eEEE---ccCccceeeeccc
Confidence 34577778766333344445666677888987 4566667777788888887654322 2221 222 245667777
Q ss_pred CCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccc-cCCceEEEeCCCCeEEEEeCCCCeEEEEEcC
Q psy13635 128 TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEV-EHPDGVAVDWVARNLYWTDTGTDRIEVCRLE 206 (357)
Q Consensus 128 ~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~-~~p~glavD~~~~~lY~td~~~~~I~~~~~~ 206 (357)
.++.+++..-...-+++..+.....++ +.+- ...+ ..+....+|..++.|| +..+.+.+.+.+.+
T Consensus 118 k~n~~va~~~~~sp~vi~~s~~~h~~L-p~d~------------d~dln~sas~~~fdr~g~yIi-tGtsKGkllv~~a~ 183 (405)
T KOG1273|consen 118 KRNKCVATIMEESPVVIDFSDPKHSVL-PKDD------------DGDLNSSASHGVFDRRGKYII-TGTSKGKLLVYDAE 183 (405)
T ss_pred cCCeEEEEEecCCcEEEEecCCceeec-cCCC------------ccccccccccccccCCCCEEE-EecCcceEEEEecc
Confidence 777776654433333334333222222 2111 1111 1233336776555555 66777889888877
Q ss_pred CCceEEEec-CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEec
Q psy13635 207 GTHRKVLVN-TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLL 250 (357)
Q Consensus 207 g~~~~~~~~-~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~ 250 (357)
......-.. ........|.+.. .|+-+..+... ..|.....
T Consensus 184 t~e~vas~rits~~~IK~I~~s~-~g~~liiNtsD--RvIR~ye~ 225 (405)
T KOG1273|consen 184 TLECVASFRITSVQAIKQIIVSR-KGRFLIINTSD--RVIRTYEI 225 (405)
T ss_pred hheeeeeeeechheeeeEEEEec-cCcEEEEecCC--ceEEEEeh
Confidence 654322111 1124566777774 46666666653 35655554
No 230
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=61.72 E-value=1.3e+02 Score=27.57 Aligned_cols=233 Identities=12% Similarity=0.033 Sum_probs=126.4
Q ss_pred eEEEEEeC--CcEEEEEcCCCCcceEec-cCCCcEEE-EEEEccCCEEEEEeC----CCCeEEEEEcCCCCcceeEEEEe
Q psy13635 42 QMLLFATS--KDIRIANLSRPLKPVTII-KDLEEGAA-IDYYYKKSMVCWTDH----GTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 42 ~~l~~~~~--~~i~~~~~~~~~~~~~~~-~~~~~~~~-i~~d~~~~~ly~~d~----~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
..+.|+-+ ....++|..++.....+. +.-++..| -.|+++...||-++. ..+.|...+...+- .......
T Consensus 18 ~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~--~ri~E~~ 95 (305)
T PF07433_consen 18 EAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGY--RRIGEFP 95 (305)
T ss_pred eEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCc--EEEeEec
Confidence 34555553 346778887754443333 33333333 247777888888844 34678888887432 2233333
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCC-----------------EEEEE-EcCCCceEEEEecCCCCcceeeeeccC-ccc
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETN-----------------KLEVS-SLDGKKRKVLYWEDIDQPRAIASYKLP-TIE 174 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~-----------------~I~~~-~~~g~~~~~~~~~~~~~p~~i~~~~~~-~~~ 174 (357)
..-..|.-+.+.+.++.|.+++.+-. .+..+ ..+|...+... +| ...
T Consensus 96 s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~--------------Lp~~~~ 161 (305)
T PF07433_consen 96 SHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVE--------------LPPDLH 161 (305)
T ss_pred CCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeee--------------cCcccc
Confidence 33346999999987779999886421 11111 11222221110 11 111
Q ss_pred ccCCceEEEeCCCCeEEEEeCCCC-------eEEEEEcCCCceEEEecC----C-CCCceEEEEeCCCCEEEEEeCCCCC
Q psy13635 175 VEHPDGVAVDWVARNLYWTDTGTD-------RIEVCRLEGTHRKVLVNT----D-LVEPRAITLSPAHGYLFWSDWNEKR 242 (357)
Q Consensus 175 ~~~p~glavD~~~~~lY~td~~~~-------~I~~~~~~g~~~~~~~~~----~-~~~P~giavd~~~g~Ly~~d~~~~~ 242 (357)
..+..-|+++ ..|.+.+.....+ -+.....++.....-... . -...-+|+++...+.+..|....
T Consensus 162 ~lSiRHLa~~-~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrG-- 238 (305)
T PF07433_consen 162 QLSIRHLAVD-GDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRG-- 238 (305)
T ss_pred ccceeeEEec-CCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCC--
Confidence 1245677888 4456666644332 233333333221111111 1 13567899998767788888774
Q ss_pred CeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe
Q psy13635 243 PKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR 298 (357)
Q Consensus 243 ~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~ 298 (357)
+++...+..... .+-...+...-|++.. .++ |+..++.+.+......+...
T Consensus 239 g~~~~~d~~tg~--~~~~~~l~D~cGva~~-~~~--f~~ssG~G~~~~~~~~~~~~ 289 (305)
T PF07433_consen 239 GRVAVWDAATGR--LLGSVPLPDACGVAPT-DDG--FLVSSGQGQLIRLSPDGPQP 289 (305)
T ss_pred CEEEEEECCCCC--EeeccccCceeeeeec-CCc--eEEeCCCccEEEccCccccc
Confidence 477777554332 2323445566788875 344 66677788888777655443
No 231
>KOG2139|consensus
Probab=61.67 E-value=1.4e+02 Score=27.97 Aligned_cols=113 Identities=14% Similarity=0.100 Sum_probs=65.4
Q ss_pred eEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEE-ecCCCceEEE
Q psy13635 180 GVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERS-LLNGGERVLL 258 (357)
Q Consensus 180 glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~-~~dg~~~~~~ 258 (357)
.+.-.+.+..|--+..+...|+.-+++......+...++..-.-+-.+|++..||-+..... .+++.. +.-...+..+
T Consensus 200 smqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~dav-frlw~e~q~wt~erw~l 278 (445)
T KOG2139|consen 200 SMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAV-FRLWQENQSWTKERWIL 278 (445)
T ss_pred EEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccce-eeeehhcccceecceec
Confidence 33444333333333444557888888866655555444444555677887666666655532 344422 2222222222
Q ss_pred eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC
Q psy13635 259 VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 259 ~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~ 296 (357)
. ++ ...+-.-++.+..|.++-.+..+++++..++.
T Consensus 279 g-sg--rvqtacWspcGsfLLf~~sgsp~lysl~f~~~ 313 (445)
T KOG2139|consen 279 G-SG--RVQTACWSPCGSFLLFACSGSPRLYSLTFDGE 313 (445)
T ss_pred c-CC--ceeeeeecCCCCEEEEEEcCCceEEEEeecCC
Confidence 2 22 44455667788899999999999999988764
No 232
>KOG2919|consensus
Probab=61.40 E-value=1.4e+02 Score=27.66 Aligned_cols=247 Identities=12% Similarity=0.044 Sum_probs=123.0
Q ss_pred EEEEEEEEEe-ecCCCCe-EEEEEeCCc-EEEEEcCCCCcceEe------ccCCCcEEEEEEEccCCEEEEEeCCCCeEE
Q psy13635 26 FLVVHFWYAL-SHHVAAQ-MLLFATSKD-IRIANLSRPLKPVTI------IKDLEEGAAIDYYYKKSMVCWTDHGTEMIS 96 (357)
Q Consensus 26 ~~~~~~~~~~-~~~~~~~-~l~~~~~~~-i~~~~~~~~~~~~~~------~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~ 96 (357)
.+....+|.. .+.+|.. ++..+.+++ |+.+|.-.+ +.+.. +......+.+.|.+++..||-.....=+|+
T Consensus 106 tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG-~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvF 184 (406)
T KOG2919|consen 106 TVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTG-KLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVF 184 (406)
T ss_pred EEEEEEeeeccccCCCccceeeeccccCceeeeecccc-ccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEe
Confidence 4555555543 2333333 333333333 888887653 22221 234556889999999999987665443444
Q ss_pred EEEcCCCCcceeEEEEe--CCcC-CceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcc
Q psy13635 97 CCTFDGNNVGSKHNVIT--NGLI-TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTI 173 (357)
Q Consensus 97 ~~~~~g~~~~~~~~~~~--~~~~-~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~ 173 (357)
...-.|..+....++.. .+.. -..-+|+.|.+-+.+-.-+-.+++....-++...-.+.. +
T Consensus 185 dt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llg----------------g 248 (406)
T KOG2919|consen 185 DTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLG----------------G 248 (406)
T ss_pred eccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeec----------------c
Confidence 44344554321122222 1111 234567887777666655555666655555544322221 1
Q ss_pred cccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec----CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 174 EVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN----TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 174 ~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~----~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
.-+...-|...+.+++||.-.....+|..-|+.-....+... +..++---..+||. |.+..+-.. .+.|.+-+
T Consensus 249 h~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~-~~~LasG~t--dG~V~vwd 325 (406)
T KOG2919|consen 249 HGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPK-GEILASGDT--DGSVRVWD 325 (406)
T ss_pred cCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCC-CceeeccCC--CccEEEEe
Confidence 112445566677788888776667788887765432211110 01112122334444 333333212 26788888
Q ss_pred cCCCce-EEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 250 LNGGER-VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 250 ~dg~~~-~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
+++-.. ..+....-...+|+++.|.-. | .+-...++++....+
T Consensus 326 lk~~gn~~sv~~~~sd~vNgvslnP~mp-i-latssGqr~f~~~~d 369 (406)
T KOG2919|consen 326 LKDLGNEVSVTGNYSDTVNGVSLNPIMP-I-LATSSGQRIFKYPKD 369 (406)
T ss_pred cCCCCCcccccccccccccceecCcccc-e-eeeccCceeecCCCc
Confidence 776222 222211122356777765422 2 233334566666554
No 233
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=61.29 E-value=20 Score=21.27 Aligned_cols=28 Identities=14% Similarity=-0.026 Sum_probs=20.3
Q ss_pred CEEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 317 DYVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 317 ~~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
|.+|+. ...+.|+.+|..+|+.+-..-.
T Consensus 1 ~~v~~~-~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 1 GRVYVG-TPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp TEEEEE-TTTSEEEEEETTTTSEEEEEES
T ss_pred CEEEEe-CCCCEEEEEECCCCCEEEeeeC
Confidence 467777 6678888888888887665433
No 234
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=60.65 E-value=2.2e+02 Score=29.88 Aligned_cols=23 Identities=13% Similarity=0.040 Sum_probs=13.6
Q ss_pred EEEEeCCCCeEEEEeCccCceeEE
Q psy13635 319 VYWTDWQRRSIDRVNKITGNDREV 342 (357)
Q Consensus 319 ly~td~~~~~I~~~~~~~g~~~~~ 342 (357)
+|.. .+++.++.+|+.+|+.+..
T Consensus 462 v~~~-~K~G~~~vlDr~tG~~l~~ 484 (764)
T TIGR03074 462 LVAP-TKQGQIYVLDRRTGEPIVP 484 (764)
T ss_pred EEEE-CCCCEEEEEECCCCCEEee
Confidence 4443 3556677777767765544
No 235
>KOG0286|consensus
Probab=60.06 E-value=1.4e+02 Score=27.23 Aligned_cols=261 Identities=11% Similarity=0.058 Sum_probs=143.3
Q ss_pred eEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEE
Q psy13635 64 VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEV 143 (357)
Q Consensus 64 ~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~ 143 (357)
..+-..+.+..++++.++.. ..++...++++...+.-.++ .+..+.-.-......|+.|. ++..-+-.-++.-.+
T Consensus 49 r~LkGH~~Ki~~~~ws~Dsr-~ivSaSqDGklIvWDs~Ttn---K~haipl~s~WVMtCA~sPS-g~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 49 RTLKGHLNKIYAMDWSTDSR-RIVSASQDGKLIVWDSFTTN---KVHAIPLPSSWVMTCAYSPS-GNFVACGGLDNKCSI 123 (343)
T ss_pred EEecccccceeeeEecCCcC-eEEeeccCCeEEEEEccccc---ceeEEecCceeEEEEEECCC-CCeEEecCcCceeEE
Confidence 44455777889999987544 44566666776666655553 23344434455677788874 443333333343333
Q ss_pred EEcCCCceE--EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCc
Q psy13635 144 SSLDGKKRK--VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEP 221 (357)
Q Consensus 144 ~~~~g~~~~--~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P 221 (357)
+++.....+ +-+...+. .. -.......+= .+.-..|..+..+..--|...........+.....
T Consensus 124 y~ls~~d~~g~~~v~r~l~-----------gH-tgylScC~f~--dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV 189 (343)
T KOG0286|consen 124 YPLSTRDAEGNVRVSRELA-----------GH-TGYLSCCRFL--DDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDV 189 (343)
T ss_pred Eecccccccccceeeeeec-----------Cc-cceeEEEEEc--CCCceEecCCCceEEEEEcccceEEEEecCCcccE
Confidence 333321111 00000000 00 0011112221 12333455555555555555444444445566678
Q ss_pred eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEE
Q psy13635 222 RAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRREL 301 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i 301 (357)
.+|++.|.+++.|++-......+++-++-. .-.+.+ ...-...+.+.+- .+|.-|.+-+..+..+.+|+.......+
T Consensus 190 ~slsl~p~~~ntFvSg~cD~~aklWD~R~~-~c~qtF-~ghesDINsv~ff-P~G~afatGSDD~tcRlyDlRaD~~~a~ 266 (343)
T KOG0286|consen 190 MSLSLSPSDGNTFVSGGCDKSAKLWDVRSG-QCVQTF-EGHESDINSVRFF-PSGDAFATGSDDATCRLYDLRADQELAV 266 (343)
T ss_pred EEEecCCCCCCeEEecccccceeeeeccCc-ceeEee-cccccccceEEEc-cCCCeeeecCCCceeEEEeecCCcEEee
Confidence 899999988999999766443466655533 223333 2333456777775 5677788888888888898876544334
Q ss_pred ec-CCCC-ceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecc
Q psy13635 302 IN-ENLP-HVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 302 ~~-~~~~-~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~ 346 (357)
.+ +... ...++++. .|+|.++-.....+.+-+...|+...++..+
T Consensus 267 ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GH 314 (343)
T KOG0286|consen 267 YSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGH 314 (343)
T ss_pred eccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeecc
Confidence 33 2333 34677776 5888887666666666665455555555433
No 236
>KOG0284|consensus
Probab=59.89 E-value=1.6e+02 Score=28.01 Aligned_cols=203 Identities=8% Similarity=0.012 Sum_probs=108.0
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
-....++.+.+.+..+ ++....+.|.....+-.. ...+-...-....++|+.+ ++.-|.+.++.++|...+.--.
T Consensus 138 Ds~Vr~m~ws~~g~wm-iSgD~gG~iKyWqpnmnn---Vk~~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~ 212 (464)
T KOG0284|consen 138 DSPVRTMKWSHNGTWM-ISGDKGGMIKYWQPNMNN---VKIIQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMP 212 (464)
T ss_pred cccceeEEEccCCCEE-EEcCCCceEEecccchhh---hHHhhHhhhhhhheeccCC-CCceeEEecCCCeEEEEeccCC
Confidence 3345678887755444 344445677766666553 1222222335688999997 8889999999999998876443
Q ss_pred ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCC
Q psy13635 150 KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPA 229 (357)
Q Consensus 150 ~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~ 229 (357)
..+.++.. -...+..+.-.|..+.|. +-...+.|.--|+............-....++.+.+.
T Consensus 213 kee~vL~G----------------HgwdVksvdWHP~kgLia-sgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n 275 (464)
T KOG0284|consen 213 KEERVLRG----------------HGWDVKSVDWHPTKGLIA-SGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPN 275 (464)
T ss_pred chhheecc----------------CCCCcceeccCCccceeE-EccCCceeEeecCCCcchhhhhhhccceEEEEEEcCC
Confidence 33333211 112466666665555444 4343445555555533322111223345667777765
Q ss_pred CCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 230 HGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 230 ~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
+....|-... ..+..+++..-.........-.....++-.|....|+.+-...+.|.-.......
T Consensus 276 -~N~Llt~skD--~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~ 340 (464)
T KOG0284|consen 276 -GNWLLTGSKD--QSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEE 340 (464)
T ss_pred -CCeeEEccCC--ceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccc
Confidence 4333333332 3555555541111111111112234455556677777777777777666665443
No 237
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=59.03 E-value=30 Score=19.31 Aligned_cols=27 Identities=19% Similarity=0.070 Sum_probs=19.9
Q ss_pred EECCEEEEEeCCCCeEEEEeCccCceeE
Q psy13635 314 LLGDYVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 314 ~~~~~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
..++.+|+... .+.++.++..+|+.+-
T Consensus 4 ~~~~~v~~~~~-~g~l~a~d~~~G~~~W 30 (33)
T smart00564 4 LSDGTVYVGST-DGTLYALDAKTGEILW 30 (33)
T ss_pred EECCEEEEEcC-CCEEEEEEcccCcEEE
Confidence 34668888764 4889999988887653
No 238
>KOG0319|consensus
Probab=58.82 E-value=2.2e+02 Score=29.24 Aligned_cols=227 Identities=12% Similarity=0.104 Sum_probs=123.1
Q ss_pred CCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEE-ccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCC
Q psy13635 40 AAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYY-YKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT 118 (357)
Q Consensus 40 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d-~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 118 (357)
...++++++.+++..+|.+.-.-...++..-.....|-|- +.++.|.++. .+..++.++..+.. -.++...-..
T Consensus 293 ~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVAT-Ns~~lr~y~~~~~~----c~ii~GH~e~ 367 (775)
T KOG0319|consen 293 MSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVAT-NSPELRLYTLPTSY----CQIIPGHTEA 367 (775)
T ss_pred cCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEe-CCCceEEEecCCCc----eEEEeCchhh
Confidence 4467777888888888775533333344444456666553 4456777664 34566666777775 2244433333
Q ss_pred ceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceE-EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 119 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK-VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~-~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
..++++ |.++.++.+-+-.+++....++..-.. ..+... ..--+...++++....-..|++-+..
T Consensus 368 vlSL~~-~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~-------------~gH~~svgava~~~~~asffvsvS~D 433 (775)
T KOG0319|consen 368 VLSLDV-WSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQA-------------NGHTNSVGAVAGSKLGASFFVSVSQD 433 (775)
T ss_pred eeeeee-cccCcEEEEecCCceEEEEEecCCcchhhhhhhh-------------cccccccceeeecccCccEEEEecCC
Confidence 444442 567777777777777666655322221 111111 11113456677754445566666666
Q ss_pred CeEEEEEcCCCc----eEEEec-----CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceE
Q psy13635 198 DRIEVCRLEGTH----RKVLVN-----TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNG 268 (357)
Q Consensus 198 ~~I~~~~~~g~~----~~~~~~-----~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~g 268 (357)
..+..=++.++. ...+.. ..-+..+++++.|. ..|.-|-......+|+... ++. ..-+++..-.....
T Consensus 434 ~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~n-dkLiAT~SqDktaKiW~le-~~~-l~~vLsGH~RGvw~ 510 (775)
T KOG0319|consen 434 CTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPN-DKLIATGSQDKTAKIWDLE-QLR-LLGVLSGHTRGVWC 510 (775)
T ss_pred ceEEEecCCCcccccccceehhhHHHHhhcccccceEecCC-CceEEecccccceeeeccc-Cce-EEEEeeCCccceEE
Confidence 666655555421 111110 12357899999985 6676666554457888877 332 22223333344556
Q ss_pred EEEecCCCEEEEEeCCCCeEE
Q psy13635 269 ITLDVDNEKLYWCDAKTDKIE 289 (357)
Q Consensus 269 iaid~~~~~lY~~d~~~~~I~ 289 (357)
+.+. ..+.+.-+-++...|.
T Consensus 511 V~Fs-~~dq~laT~SgD~TvK 530 (775)
T KOG0319|consen 511 VSFS-KNDQLLATCSGDKTVK 530 (775)
T ss_pred EEec-cccceeEeccCCceEE
Confidence 6665 3445555555554433
No 239
>KOG0283|consensus
Probab=58.15 E-value=2.3e+02 Score=29.23 Aligned_cols=150 Identities=12% Similarity=0.085 Sum_probs=87.6
Q ss_pred EEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEE
Q psy13635 122 LAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIE 201 (357)
Q Consensus 122 lavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~ 201 (357)
|.+.|..++...+.+-..++.-..+.-...-.++... ...+.+++.|.+.+-|++..-.++++
T Consensus 373 LDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~Hn-----------------dfVTcVaFnPvDDryFiSGSLD~KvR 435 (712)
T KOG0283|consen 373 LDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFSHN-----------------DFVTCVAFNPVDDRYFISGSLDGKVR 435 (712)
T ss_pred eecccccCCeeEeccccccEEeecCCCcceeeEEecC-----------------CeeEEEEecccCCCcEeecccccceE
Confidence 5667777777777777777777777665553333211 25688999999999999988777665
Q ss_pred EEEcCCCceEEEecCC-CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee---C-----CCCCceEEEEe
Q psy13635 202 VCRLEGTHRKVLVNTD-LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK---D-----RLGWPNGITLD 272 (357)
Q Consensus 202 ~~~~~g~~~~~~~~~~-~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~---~-----~l~~P~giaid 272 (357)
.=+.-... ++.-.+ -....++++.|. |.-.+.-.. ++...-.+..|-....-.. . .-....|+...
T Consensus 436 iWsI~d~~--Vv~W~Dl~~lITAvcy~Pd-Gk~avIGt~--~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~ 510 (712)
T KOG0283|consen 436 LWSISDKK--VVDWNDLRDLITAVCYSPD-GKGAVIGTF--NGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFF 510 (712)
T ss_pred EeecCcCe--eEeehhhhhhheeEEeccC-CceEEEEEe--ccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEec
Confidence 55444332 222112 244667777776 433333333 1455555555433221110 1 11246777776
Q ss_pred cCC-CEEEEEeCCCCeEEEEeCC
Q psy13635 273 VDN-EKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 273 ~~~-~~lY~~d~~~~~I~~~~~d 294 (357)
+.. .+|.|+... .+|+.++..
T Consensus 511 p~~~~~vLVTSnD-SrIRI~d~~ 532 (712)
T KOG0283|consen 511 PGDPDEVLVTSND-SRIRIYDGR 532 (712)
T ss_pred CCCCCeEEEecCC-CceEEEecc
Confidence 433 358887654 488888763
No 240
>KOG0772|consensus
Probab=57.66 E-value=2e+02 Score=28.37 Aligned_cols=210 Identities=9% Similarity=-0.014 Sum_probs=113.5
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCccee--EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSK--HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~--~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
-..++++|+.+-++ ++...+..|.-.++.|-..... +.+..........+++.+.++.|.+.. ++.+...++-||.
T Consensus 169 ~Vsal~~Dp~GaR~-~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvs-g~aqakl~DRdG~ 246 (641)
T KOG0772|consen 169 IVSALAVDPSGARF-VSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVS-GSAQAKLLDRDGF 246 (641)
T ss_pred EEEEeeecCCCcee-eeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEe-cCcceeEEccCCc
Confidence 45688999865554 4666667788888888764211 223333345677888887666655544 4566777788887
Q ss_pred ceEEEEecC-----CCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCe--EEEEEcCCCceEEEecC----CC
Q psy13635 150 KRKVLYWED-----IDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDR--IEVCRLEGTHRKVLVNT----DL 218 (357)
Q Consensus 150 ~~~~~~~~~-----~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~--I~~~~~~g~~~~~~~~~----~~ 218 (357)
........+ +.+..+ -+...+.-...|.+...|.|....+. |+-.+..-+...++... .-
T Consensus 247 ~~~e~~KGDQYI~Dm~nTKG---------Hia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~R 317 (641)
T KOG0772|consen 247 EIVEFSKGDQYIRDMYNTKG---------HIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKR 317 (641)
T ss_pred eeeeeeccchhhhhhhccCC---------ceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcc
Confidence 654443222 111111 11112222345567777877776664 44443333444444332 12
Q ss_pred CCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE--Eee-C--CCCCceEEEEecCCCEEEEEeCCCCeEEEEeC
Q psy13635 219 VEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL--LVK-D--RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 219 ~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~--~~~-~--~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~ 293 (357)
-.|...+.++. |.++-+-.. .+.|.--+..+..... .+. . ......+|++.+ +|+...+-...+.+..-++
T Consensus 318 v~~tsC~~nrd-g~~iAagc~--DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~-dg~~LlSRg~D~tLKvWDL 393 (641)
T KOG0772|consen 318 VPVTSCAWNRD-GKLIAAGCL--DGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSY-DGNYLLSRGFDDTLKVWDL 393 (641)
T ss_pred cCceeeecCCC-cchhhhccc--CCceeeeecCCcccccceEeeeccCCCCceeEEEecc-ccchhhhccCCCceeeeec
Confidence 35678888875 666444333 2466555543322211 111 1 122457888874 5555566666666666666
Q ss_pred CCC
Q psy13635 294 DGN 296 (357)
Q Consensus 294 dG~ 296 (357)
+--
T Consensus 394 rq~ 396 (641)
T KOG0772|consen 394 RQF 396 (641)
T ss_pred ccc
Confidence 543
No 241
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=57.40 E-value=19 Score=21.50 Aligned_cols=24 Identities=13% Similarity=0.137 Sum_probs=17.7
Q ss_pred EEEEECCEEEEEeCCCCeEEEEeCc
Q psy13635 311 GISLLGDYVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 311 gia~~~~~ly~td~~~~~I~~~~~~ 335 (357)
++++.++.+|+.+. .+.++.++..
T Consensus 16 ~~~v~~g~vyv~~~-dg~l~ald~~ 39 (40)
T PF13570_consen 16 SPAVAGGRVYVGTG-DGNLYALDAA 39 (40)
T ss_dssp --EECTSEEEEE-T-TSEEEEEETT
T ss_pred CCEEECCEEEEEcC-CCEEEEEeCC
Confidence 34778999999986 5899999874
No 242
>KOG0275|consensus
Probab=56.26 E-value=1.7e+02 Score=27.02 Aligned_cols=46 Identities=11% Similarity=0.098 Sum_probs=25.0
Q ss_pred EEeCCCCeEEEEeCCCCeEEEEEcC-CCceEEEecCCCCCceEEEEeCC
Q psy13635 182 AVDWVARNLYWTDTGTDRIEVCRLE-GTHRKVLVNTDLVEPRAITLSPA 229 (357)
Q Consensus 182 avD~~~~~lY~td~~~~~I~~~~~~-g~~~~~~~~~~~~~P~giavd~~ 229 (357)
++.|.+..+|.... .+..+.++.- |+..+.+ .-.-..|-|++-+|-
T Consensus 444 ~lSpkGewiYcigE-D~vlYCF~~~sG~LE~tl-~VhEkdvIGl~HHPH 490 (508)
T KOG0275|consen 444 ILSPKGEWIYCIGE-DGVLYCFSVLSGKLERTL-PVHEKDVIGLTHHPH 490 (508)
T ss_pred EecCCCcEEEEEcc-CcEEEEEEeecCceeeee-ecccccccccccCcc
Confidence 44556677775544 3455555433 4433333 223356778887764
No 243
>PHA02713 hypothetical protein; Provisional
Probab=56.05 E-value=2.3e+02 Score=28.51 Aligned_cols=183 Identities=10% Similarity=0.076 Sum_probs=92.7
Q ss_pred CCEEEEEeCCC------CeEEEEEcCCCCcceeEEEEeCCcCCce---eEEEEcCCCeEEEEeCCC-----CEEEEEEcC
Q psy13635 82 KSMVCWTDHGT------EMISCCTFDGNNVGSKHNVITNGLITPD---GLAIDWLTEKLYWTDSET-----NKLEVSSLD 147 (357)
Q Consensus 82 ~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~~~~~~~~~p~---glavd~~~~~ly~td~~~-----~~I~~~~~~ 147 (357)
++.||+..... ..+++.++.... +..+. .+..|. ++++ .+++||+.-..+ ..+.++++.
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~----W~~~~-~m~~~R~~~~~~~--~~g~IYviGG~~~~~~~~sve~Ydp~ 375 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKI----HVELP-PMIKNRCRFSLAV--IDDTIYAIGGQNGTNVERTIECYTMG 375 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCe----EeeCC-CCcchhhceeEEE--ECCEEEEECCcCCCCCCceEEEEECC
Confidence 68999985532 346777776553 33332 222222 3333 378999986532 356777765
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC-----------------------CeEEEEE
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT-----------------------DRIEVCR 204 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~-----------------------~~I~~~~ 204 (357)
...=..+ ..+..|+. .....+ .+++||+..... +.+++++
T Consensus 376 ~~~W~~~--~~mp~~r~------------~~~~~~---~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YD 438 (557)
T PHA02713 376 DDKWKML--PDMPIALS------------SYGMCV---LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYD 438 (557)
T ss_pred CCeEEEC--CCCCcccc------------cccEEE---ECCEEEEEeCCCcccccccccccccccccccccccceEEEEC
Confidence 4321211 11111111 222222 368999975432 3577777
Q ss_pred cCCCceEEEecCCCCC---ceEEEEeCCCCEEEEEeCCCC----CCeEEEEecCCCceEEEeeCCCCCc---eEEEEecC
Q psy13635 205 LEGTHRKVLVNTDLVE---PRAITLSPAHGYLFWSDWNEK----RPKIERSLLNGGERVLLVKDRLGWP---NGITLDVD 274 (357)
Q Consensus 205 ~~g~~~~~~~~~~~~~---P~giavd~~~g~Ly~~d~~~~----~~~I~~~~~dg~~~~~~~~~~l~~P---~giaid~~ 274 (357)
+....=..+. .+.. ..++++- +|+||+.-.... ...+++.+++..+....+. .+..| .|+++ .
T Consensus 439 P~td~W~~v~--~m~~~r~~~~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~-~m~~~r~~~~~~~--~ 511 (557)
T PHA02713 439 TVNNIWETLP--NFWTGTIRPGVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELIT-TTESRLSALHTIL--H 511 (557)
T ss_pred CCCCeEeecC--CCCcccccCcEEEE--CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEcc-ccCcccccceeEE--E
Confidence 7654322222 2222 2234443 589999853211 1257788877523343332 23332 35555 5
Q ss_pred CCEEEEEeCCCC--eEEEEeCCC
Q psy13635 275 NEKLYWCDAKTD--KIEMIDFDG 295 (357)
Q Consensus 275 ~~~lY~~d~~~~--~I~~~~~dG 295 (357)
+++||+.-...+ .+.++|+..
T Consensus 512 ~~~iyv~Gg~~~~~~~e~yd~~~ 534 (557)
T PHA02713 512 DNTIMMLHCYESYMLQDTFNVYT 534 (557)
T ss_pred CCEEEEEeeecceeehhhcCccc
Confidence 789999754333 445555443
No 244
>KOG0308|consensus
Probab=54.55 E-value=2.5e+02 Score=28.52 Aligned_cols=173 Identities=9% Similarity=-0.017 Sum_probs=94.7
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
.+...-.....||+-...+.++.+-.-.++|...+++....+.+.+.....-.. ++.+.-.....+|.. .++.+
T Consensus 112 tir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~s-----l~sG~k~siYSLA~N-~t~t~ 185 (735)
T KOG0308|consen 112 TIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNS-----LGSGPKDSIYSLAMN-QTGTI 185 (735)
T ss_pred hhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccccccc-----CCCCCccceeeeecC-CcceE
Confidence 333334456778885567778877777888988888744221111111000000 001222344667766 45578
Q ss_pred EEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceE--EEeeCCCCCceE
Q psy13635 191 YWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERV--LLVKDRLGWPNG 268 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~--~~~~~~l~~P~g 268 (357)
+++....+-++..++....+.+-+.+...+.+.|-++.++.++.-+... +.|..-++.-..-. ..+... ..-.
T Consensus 186 ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSD---gtIrlWdLgqQrCl~T~~vH~e--~VWa 260 (735)
T KOG0308|consen 186 IVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSD---GTIRLWDLGQQRCLATYIVHKE--GVWA 260 (735)
T ss_pred EEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCC---ceEEeeeccccceeeeEEeccC--ceEE
Confidence 8777666677777777655544444566778888888764455444433 45655555432111 111111 1345
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 269 ITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 269 iaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
+..+++-..+|..+. .+.|++.++..
T Consensus 261 L~~~~sf~~vYsG~r-d~~i~~Tdl~n 286 (735)
T KOG0308|consen 261 LQSSPSFTHVYSGGR-DGNIYRTDLRN 286 (735)
T ss_pred EeeCCCcceEEecCC-CCcEEecccCC
Confidence 555555666776654 45777777755
No 245
>KOG1407|consensus
Probab=53.86 E-value=1.7e+02 Score=26.30 Aligned_cols=249 Identities=14% Similarity=0.041 Sum_probs=116.6
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
..+.+.|++...+-+| -+...++.+...++++.... ........-...+-++.|+....++.+-++...|.+.+....
T Consensus 20 ~~~v~Sv~wn~~g~~l-asgs~dktv~v~n~e~~r~~-~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~ 97 (313)
T KOG1407|consen 20 VQKVHSVAWNCDGTKL-ASGSFDKTVSVWNLERDRFR-KELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSG 97 (313)
T ss_pred hhcceEEEEcccCcee-eecccCCceEEEEecchhhh-hhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccC
Confidence 3455666666544333 23333444444444443210 011111222356778899999999999999999998887554
Q ss_pred ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC-CCCCceEEEEeC
Q psy13635 150 KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT-DLVEPRAITLSP 228 (357)
Q Consensus 150 ~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~-~~~~P~giavd~ 228 (357)
.....+....+ -.-++.-|.++.+-+.+. .+.|.-++.... +..... .....+-++..
T Consensus 98 k~~~~i~~~~e-----------------ni~i~wsp~g~~~~~~~k-dD~it~id~r~~--~~~~~~~~~~e~ne~~w~- 156 (313)
T KOG1407|consen 98 KCTARIETKGE-----------------NINITWSPDGEYIAVGNK-DDRITFIDARTY--KIVNEEQFKFEVNEISWN- 156 (313)
T ss_pred cEEEEeeccCc-----------------ceEEEEcCCCCEEEEecC-cccEEEEEeccc--ceeehhcccceeeeeeec-
Confidence 43222211100 001122222222222222 123333332221 111111 12234567777
Q ss_pred CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCc
Q psy13635 229 AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPH 308 (357)
Q Consensus 229 ~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~ 308 (357)
..+.+|+...+ ++.|.....-.-....-+...-.+...|.+||.+.++ -+-+....+..-|++---..+.+. .+..
T Consensus 157 ~~nd~Fflt~G--lG~v~ILsypsLkpv~si~AH~snCicI~f~p~Gryf-A~GsADAlvSLWD~~ELiC~R~is-Rldw 232 (313)
T KOG1407|consen 157 NSNDLFFLTNG--LGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYF-ATGSADALVSLWDVDELICERCIS-RLDW 232 (313)
T ss_pred CCCCEEEEecC--CceEEEEeccccccccccccCCcceEEEEECCCCceE-eeccccceeeccChhHhhhheeec-cccC
Confidence 56789998888 4688777665433333333333556788898654433 222222233333433322222222 3455
Q ss_pred e-EEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 309 V-FGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 309 p-~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
| ..|++. +|.+.-+-+...-|--+...+|..+..|..
T Consensus 233 pVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~ 271 (313)
T KOG1407|consen 233 PVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPC 271 (313)
T ss_pred ceEEEEeccCcceeeccCccceEEeEecccCCeEEEeec
Confidence 5 345553 344433334434444444455555554433
No 246
>KOG2106|consensus
Probab=53.78 E-value=2.3e+02 Score=27.89 Aligned_cols=70 Identities=13% Similarity=0.028 Sum_probs=42.9
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEE
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~ 145 (357)
+..+.+..|+=. .+.||+.-.. +.|..-+++.+. ..++...+ ..-.|+|..+ ++.+|.|....+.+...+
T Consensus 327 e~~G~iRtv~e~--~~di~vGTtr-N~iL~Gt~~~~f---~~~v~gh~-delwgla~hp-s~~q~~T~gqdk~v~lW~ 396 (626)
T KOG2106|consen 327 EQFGPIRTVAEG--KGDILVGTTR-NFILQGTLENGF---TLTVQGHG-DELWGLATHP-SKNQLLTCGQDKHVRLWN 396 (626)
T ss_pred hhcCCeeEEecC--CCcEEEeecc-ceEEEeeecCCc---eEEEEecc-cceeeEEcCC-ChhheeeccCcceEEEcc
Confidence 345555555332 3347765444 466666666653 13333333 3678999996 778889888777777666
No 247
>PF09910 DUF2139: Uncharacterized protein conserved in archaea (DUF2139); InterPro: IPR016675 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=52.84 E-value=1.9e+02 Score=26.55 Aligned_cols=132 Identities=15% Similarity=0.153 Sum_probs=73.3
Q ss_pred EEEeCCCCeEEEEeCCCC-eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe
Q psy13635 181 VAVDWVARNLYWTDTGTD-RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV 259 (357)
Q Consensus 181 lavD~~~~~lY~td~~~~-~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~ 259 (357)
=|+++..+.||+-.+-.. .+++-.-+|+ +.+=+.+.. ++|...+.+....+.++
T Consensus 40 NAV~~vDd~IyFGGWVHAPa~y~gk~~g~----------------------~~IdF~NKY---SHVH~yd~e~~~VrLLW 94 (339)
T PF09910_consen 40 NAVEWVDDFIYFGGWVHAPAVYEGKGDGR----------------------ATIDFRNKY---SHVHEYDTENDSVRLLW 94 (339)
T ss_pred eeeeeecceEEEeeeecCCceeeeccCCc----------------------eEEEEeecc---ceEEEEEcCCCeEEEEE
Confidence 367778888998766422 2333322222 122222222 45666665555555555
Q ss_pred eCCCCC-------ceEEEEecCCCEEEEEeCCCC---eEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEe---CCC
Q psy13635 260 KDRLGW-------PNGITLDVDNEKLYWCDAKTD---KIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTD---WQR 326 (357)
Q Consensus 260 ~~~l~~-------P~giaid~~~~~lY~~d~~~~---~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td---~~~ 326 (357)
.+++.. ...|..|+.+++||++-...+ -|++++..+...+.+.. -+.|.|..+.+-..|=.+ .+.
T Consensus 95 kesih~~~~WaGEVSdIlYdP~~D~LLlAR~DGh~nLGvy~ldr~~g~~~~L~~--~ps~KG~~~~D~a~F~i~~~~~g~ 172 (339)
T PF09910_consen 95 KESIHDKTKWAGEVSDILYDPYEDRLLLARADGHANLGVYSLDRRTGKAEKLSS--NPSLKGTLVHDYACFGINNFHKGV 172 (339)
T ss_pred ecccCCccccccchhheeeCCCcCEEEEEecCCcceeeeEEEcccCCceeeccC--CCCcCceEeeeeEEEeccccccCC
Confidence 554443 346788889999999987654 58888877666665554 333444333222222111 123
Q ss_pred CeEEEEeCccCce
Q psy13635 327 RSIDRVNKITGND 339 (357)
Q Consensus 327 ~~I~~~~~~~g~~ 339 (357)
..|.++|..+|+.
T Consensus 173 ~~i~~~Dli~~~~ 185 (339)
T PF09910_consen 173 SGIHCLDLISGKW 185 (339)
T ss_pred ceEEEEEccCCeE
Confidence 5677777766665
No 248
>KOG0307|consensus
Probab=52.63 E-value=3.3e+02 Score=29.41 Aligned_cols=164 Identities=9% Similarity=0.055 Sum_probs=88.5
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
....||.|.+..+++.-+..+++.|...+++......... .... ......|+-.-...+|+-+-..
T Consensus 117 G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~-~~~~-------------~~eI~~lsWNrkvqhILAS~s~ 182 (1049)
T KOG0307|consen 117 GPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG-SQAP-------------PSEIKCLSWNRKVSHILASGSP 182 (1049)
T ss_pred CceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC-CCCC-------------cccceEeccchhhhHHhhccCC
Confidence 4578899999999999999999999999987643322110 1101 1122333333333455655555
Q ss_pred CCeEEEEEcCCCceEEEecC--CCCCceEEEEeCCCCEEEEEeCC-CCCCeEEEEecCC--CceEEEeeCCCCCceEEEE
Q psy13635 197 TDRIEVCRLEGTHRKVLVNT--DLVEPRAITLSPAHGYLFWSDWN-EKRPKIERSLLNG--GERVLLVKDRLGWPNGITL 271 (357)
Q Consensus 197 ~~~I~~~~~~g~~~~~~~~~--~~~~P~giavd~~~g~Ly~~d~~-~~~~~I~~~~~dg--~~~~~~~~~~l~~P~giai 271 (357)
++++.+-|+..+...+-+.. .-.+-.+|+-+|..-.-.++-.+ .....|..-++.- +-.+++ ...-....++..
T Consensus 183 sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~-~~H~~GilslsW 261 (1049)
T KOG0307|consen 183 SGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKIL-EGHQRGILSLSW 261 (1049)
T ss_pred CCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhh-cccccceeeecc
Confidence 56777777766632221111 11234578888875543333333 2234444444321 111221 122223445555
Q ss_pred ecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 272 DVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 272 d~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
.+.+.++..+..+.++|.+-+.+.
T Consensus 262 c~~D~~lllSsgkD~~ii~wN~~t 285 (1049)
T KOG0307|consen 262 CPQDPRLLLSSGKDNRIICWNPNT 285 (1049)
T ss_pred CCCCchhhhcccCCCCeeEecCCC
Confidence 555667777777777887777654
No 249
>PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium []. Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding
Probab=52.34 E-value=1.7e+02 Score=25.98 Aligned_cols=133 Identities=14% Similarity=0.073 Sum_probs=73.0
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCceE-EE-ecC-CCC----------CceEEEEeCCCCE--EEEEeCCCCCCeEEEEecC
Q psy13635 187 ARNLYWTDTGTDRIEVCRLEGTHRK-VL-VNT-DLV----------EPRAITLSPAHGY--LFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~g~~~~-~~-~~~-~~~----------~P~giavd~~~g~--Ly~~d~~~~~~~I~~~~~d 251 (357)
+|.||.-..+...|.+.++..+... .. +.. ... .=-.+|+|+ +|. ||-+... ++.|....+|
T Consensus 78 ngslYY~~~~s~~IvkydL~t~~v~~~~~L~~A~~~n~~~y~~~~~t~iD~AvDE-~GLWvIYat~~~--~g~ivvskld 154 (250)
T PF02191_consen 78 NGSLYYNKYNSRNIVKYDLTTRSVVARRELPGAGYNNRFPYYWSGYTDIDFAVDE-NGLWVIYATEDN--NGNIVVSKLD 154 (250)
T ss_pred CCcEEEEecCCceEEEEECcCCcEEEEEECCccccccccceecCCCceEEEEEcC-CCEEEEEecCCC--CCcEEEEeeC
Confidence 7899999988899999999976654 22 211 111 124788995 452 3333333 2345555555
Q ss_pred C--CceEEEeeCCCCCc---eEEEEecCCCEEEEEeCCC---CeE-EEEeCCCCCeEEE---ecCCCCceEEEEEE--CC
Q psy13635 252 G--GERVLLVKDRLGWP---NGITLDVDNEKLYWCDAKT---DKI-EMIDFDGNNRREL---INENLPHVFGISLL--GD 317 (357)
Q Consensus 252 g--~~~~~~~~~~l~~P---~giaid~~~~~lY~~d~~~---~~I-~~~~~dG~~~~~i---~~~~~~~p~gia~~--~~ 317 (357)
- -..+......+..+ +++.+. |.||.++... .+| ..+|........+ ..........|... +.
T Consensus 155 ~~tL~v~~tw~T~~~k~~~~naFmvC---GvLY~~~s~~~~~~~I~yafDt~t~~~~~~~i~f~~~~~~~~~l~YNP~dk 231 (250)
T PF02191_consen 155 PETLSVEQTWNTSYPKRSAGNAFMVC---GVLYATDSYDTRDTEIFYAFDTYTGKEEDVSIPFPNPYGNISMLSYNPRDK 231 (250)
T ss_pred cccCceEEEEEeccCchhhcceeeEe---eEEEEEEECCCCCcEEEEEEECCCCceeceeeeeccccCceEeeeECCCCC
Confidence 3 34444444444443 344443 8999999765 444 4445543222111 11223344556655 57
Q ss_pred EEEEEeCC
Q psy13635 318 YVYWTDWQ 325 (357)
Q Consensus 318 ~ly~td~~ 325 (357)
.||.=|.+
T Consensus 232 ~LY~wd~G 239 (250)
T PF02191_consen 232 KLYAWDNG 239 (250)
T ss_pred eEEEEECC
Confidence 88887654
No 250
>KOG0295|consensus
Probab=50.57 E-value=2.2e+02 Score=26.73 Aligned_cols=260 Identities=12% Similarity=0.072 Sum_probs=127.2
Q ss_pred CCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc
Q psy13635 38 HVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL 116 (357)
Q Consensus 38 ~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 116 (357)
++..+.+..++ ...|+..|...+.-...+-........|.|+.. ++...+-..+-.+...+.++.. +........-
T Consensus 117 hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~-Gk~l~tcSsDl~~~LWd~~~~~--~c~ks~~gh~ 193 (406)
T KOG0295|consen 117 HPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDAS-GKYLATCSSDLSAKLWDFDTFF--RCIKSLIGHE 193 (406)
T ss_pred ccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecC-ccEEEecCCccchhheeHHHHH--HHHHHhcCcc
Confidence 44455444443 456889998664332223334445677888753 4444443333235555555431 1122222223
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
.....+++=|.++.| .+.+..++|...+.+.....-.+... -.+..-+++. ..|.|+-+...
T Consensus 194 h~vS~V~f~P~gd~i-lS~srD~tik~We~~tg~cv~t~~~h----------------~ewvr~v~v~-~DGti~As~s~ 255 (406)
T KOG0295|consen 194 HGVSSVFFLPLGDHI-LSCSRDNTIKAWECDTGYCVKTFPGH----------------SEWVRMVRVN-QDGTIIASCSN 255 (406)
T ss_pred cceeeEEEEecCCee-eecccccceeEEecccceeEEeccCc----------------hHhEEEEEec-CCeeEEEecCC
Confidence 345566666554333 34455678888888777664443211 1144555555 56788877777
Q ss_pred CCeEEEEEcCCCceEEEecCCCCCc-eEEEEeCC--------------CCEEEEEeCCCCCCeEEEEecCCCceEEEeeC
Q psy13635 197 TDRIEVCRLEGTHRKVLVNTDLVEP-RAITLSPA--------------HGYLFWSDWNEKRPKIERSLLNGGERVLLVKD 261 (357)
Q Consensus 197 ~~~I~~~~~~g~~~~~~~~~~~~~P-~giavd~~--------------~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~ 261 (357)
..++.+=-......+....+ .++| .-+++-|. .+.....-... ..|...++....-...+..
T Consensus 256 dqtl~vW~~~t~~~k~~lR~-hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrD--ktIk~wdv~tg~cL~tL~g 332 (406)
T KOG0295|consen 256 DQTLRVWVVATKQCKAELRE-HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRD--KTIKIWDVSTGMCLFTLVG 332 (406)
T ss_pred CceEEEEEeccchhhhhhhc-cccceEEEEecccccCcchhhccCCCCCccEEEeeccc--ceEEEEeccCCeEEEEEec
Confidence 66665543333322121111 1111 12222221 11222222221 3555555543333333335
Q ss_pred CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEE
Q psy13635 262 RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWT 322 (357)
Q Consensus 262 ~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~t 322 (357)
..++..|+++.+ .|+-.++-+..+.+...++............-.....+++.....|++
T Consensus 333 hdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~Vv 392 (406)
T KOG0295|consen 333 HDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVV 392 (406)
T ss_pred ccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEE
Confidence 568899999974 555555556677787777755443222221111223444555666665
No 251
>KOG0264|consensus
Probab=50.46 E-value=2.4e+02 Score=27.05 Aligned_cols=161 Identities=11% Similarity=0.090 Sum_probs=94.8
Q ss_pred EEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc----ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 73 GAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV----GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 73 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
-.|+.+.....--..+...++.|.-.++++... ..........-...+.+++.+....||-+-..++++...+...
T Consensus 180 g~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~ 259 (422)
T KOG0264|consen 180 GYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRS 259 (422)
T ss_pred ccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCC
Confidence 445555544333344444455566555554431 1123333344456788999999999999888888988888763
Q ss_pred --CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEE-ecCCCCCceEEE
Q psy13635 149 --KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVL-VNTDLVEPRAIT 225 (357)
Q Consensus 149 --~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~-~~~~~~~P~gia 225 (357)
....... ..--...+.+++.|.++.|..|....++|...|+..-..... ..+.-.....+.
T Consensus 260 ~~~~~~~~~----------------~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~ 323 (422)
T KOG0264|consen 260 NTSKPSHSV----------------KAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVE 323 (422)
T ss_pred CCCCCcccc----------------cccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEE
Confidence 1111111 111124678999999999999988888999988775433222 222233455666
Q ss_pred EeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 226 LSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 226 vd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
.+|....+.-+.... +++..-+++
T Consensus 324 WSPh~etvLASSg~D--~rl~vWDls 347 (422)
T KOG0264|consen 324 WSPHNETVLASSGTD--RRLNVWDLS 347 (422)
T ss_pred eCCCCCceeEecccC--CcEEEEecc
Confidence 677655555554432 455555544
No 252
>KOG1408|consensus
Probab=50.11 E-value=3.1e+02 Score=28.37 Aligned_cols=89 Identities=9% Similarity=0.090 Sum_probs=53.5
Q ss_pred ceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecC-C--CCceEEEEEECCEEEEEeCCC-CeEEEEeCccCceeE
Q psy13635 266 PNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINE-N--LPHVFGISLLGDYVYWTDWQR-RSIDRVNKITGNDRE 341 (357)
Q Consensus 266 P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~-~--~~~p~gia~~~~~ly~td~~~-~~I~~~~~~~g~~~~ 341 (357)
-..+++|+..+.+. +--....|..++...........+ + -+.+.-+..|...+|++-+.+ +.+..+|..+|+-..
T Consensus 599 lYDm~Vdp~~k~v~-t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA 677 (1080)
T KOG1408|consen 599 LYDMAVDPTSKLVV-TVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVA 677 (1080)
T ss_pred EEEeeeCCCcceEE-EEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhh
Confidence 35789996655544 444455788888754443333332 2 234666777877788866555 557778887888766
Q ss_pred EEecccCCceeeee
Q psy13635 342 VIIERSCTGVTRRR 355 (357)
Q Consensus 342 ~i~~~l~~p~~i~~ 355 (357)
....+..-..|+++
T Consensus 678 ~m~GHsE~VTG~kF 691 (1080)
T KOG1408|consen 678 QMTGHSEAVTGVKF 691 (1080)
T ss_pred hhcCcchheeeeee
Confidence 55554444444443
No 253
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=49.87 E-value=60 Score=20.00 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=22.7
Q ss_pred ceEEEEEECCEEEEEeCCCCeEEEEeCccCce
Q psy13635 308 HVFGISLLGDYVYWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 308 ~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~ 339 (357)
...++++.++++|++++.. .+..+|..+...
T Consensus 3 ~a~~v~v~g~yaYva~~~~-Gl~IvDISnPs~ 33 (42)
T PF08309_consen 3 DARDVAVSGNYAYVADGNN-GLVIVDISNPSN 33 (42)
T ss_pred eEEEEEEECCEEEEEeCCC-CEEEEECCCCCC
Confidence 4567899999999998774 566777644443
No 254
>KOG3567|consensus
Probab=49.05 E-value=28 Score=33.43 Aligned_cols=35 Identities=11% Similarity=0.312 Sum_probs=29.0
Q ss_pred CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC
Q psy13635 261 DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 261 ~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~ 296 (357)
..+..|.||.+| .+|..|++|..++.+...+..++
T Consensus 464 ~~fylphgl~~d-kdgf~~~tdvash~v~k~k~~~~ 498 (501)
T KOG3567|consen 464 NLFYLPHGLSID-KDGFYWVTDVASHQVFKLKPNNK 498 (501)
T ss_pred CceecCCcceec-CCCcEEeecccchhhhhcccccc
Confidence 347789999999 79999999999888887776654
No 255
>KOG0316|consensus
Probab=47.77 E-value=2e+02 Score=25.44 Aligned_cols=137 Identities=10% Similarity=0.093 Sum_probs=75.1
Q ss_pred CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC--CCceEEEeeCCCCCceEEEEec
Q psy13635 196 GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN--GGERVLLVKDRLGWPNGITLDV 273 (357)
Q Consensus 196 ~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d--g~~~~~~~~~~l~~P~giaid~ 273 (357)
+...++..+.+.....--..+...+.+.+.++.. ..+.++-... .++...+.. .....+++.+.......|.+
T Consensus 79 gDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNee-sSVv~SgsfD--~s~r~wDCRS~s~ePiQildea~D~V~Si~v-- 153 (307)
T KOG0316|consen 79 GDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEE-SSVVASGSFD--SSVRLWDCRSRSFEPIQILDEAKDGVSSIDV-- 153 (307)
T ss_pred CCceEEEEEcccCeeeeecccccceeeEEEecCc-ceEEEecccc--ceeEEEEcccCCCCccchhhhhcCceeEEEe--
Confidence 3334555555433222222345667788888854 4454544432 344444443 33344444443333444443
Q ss_pred CCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceE-EEEEE-CCEEEEEeCCCCeEEEEeCccCceeE
Q psy13635 274 DNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVF-GISLL-GDYVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 274 ~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~-gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
.++..++-+-.+.++.+++.-.. +....+.+|. .+.+. .+..-.+..-...++-+++.+|+.+.
T Consensus 154 -~~heIvaGS~DGtvRtydiR~G~---l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~ 219 (307)
T KOG0316|consen 154 -AEHEIVAGSVDGTVRTYDIRKGT---LSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLK 219 (307)
T ss_pred -cccEEEeeccCCcEEEEEeecce---eehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHH
Confidence 56677777778888888874322 2334577774 45554 34444455555788888988887654
No 256
>KOG3567|consensus
Probab=47.16 E-value=40 Score=32.46 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=30.0
Q ss_pred cccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT 208 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~ 208 (357)
..+|.-|.||.+| .+|..|.+|.+.+.+....+.++
T Consensus 463 ~~~fylphgl~~d-kdgf~~~tdvash~v~k~k~~~~ 498 (501)
T KOG3567|consen 463 KNLFYLPHGLSID-KDGFYWVTDVASHQVFKLKPNNK 498 (501)
T ss_pred CCceecCCcceec-CCCcEEeecccchhhhhcccccc
Confidence 4577899999999 89999999999888887766654
No 257
>KOG0650|consensus
Probab=46.11 E-value=3.3e+02 Score=27.48 Aligned_cols=73 Identities=16% Similarity=0.227 Sum_probs=51.9
Q ss_pred CCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC
Q psy13635 219 VEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 219 ~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~ 296 (357)
..|..+.++|..-+||++... .|...++.-.....-+..+..+..++++++.+++|.+.. ..+++..+|+|-+
T Consensus 567 G~vq~v~FHPs~p~lfVaTq~----~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs-~d~k~~WfDldls 639 (733)
T KOG0650|consen 567 GLVQRVKFHPSKPYLFVATQR----SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGS-YDKKMCWFDLDLS 639 (733)
T ss_pred CceeEEEecCCCceEEEEecc----ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEec-CCCeeEEEEcccC
Confidence 468889999998999999876 555566543222222235667788999998888887765 4568888888754
No 258
>KOG0271|consensus
Probab=45.84 E-value=2.7e+02 Score=26.41 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=64.0
Q ss_pred EeecCCCCeEEEEEe-CCcEEEEEcCCCCcceEec-cCCCcEEEEEEEcc----CCEEEEEeCCCCeEEEEEcCCCCcce
Q psy13635 34 ALSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTII-KDLEEGAAIDYYYK----KSMVCWTDHGTEMISCCTFDGNNVGS 107 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~-~~~~~~~~i~~d~~----~~~ly~~d~~~~~I~~~~~~g~~~~~ 107 (357)
|++=+++...|.-.. .++|...|...+...-... ..-..+.++++.|- +.+.+-+...++.++..+..+..
T Consensus 162 cvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~--- 238 (480)
T KOG0271|consen 162 CVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT--- 238 (480)
T ss_pred EEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce---
Confidence 444454444343332 4578888875543333333 34445678888652 34555556667778888887763
Q ss_pred eEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc-CCCceE
Q psy13635 108 KHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL-DGKKRK 152 (357)
Q Consensus 108 ~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~-~g~~~~ 152 (357)
......+-..|.- ++-|-+..+.++.+-..+|.+.+. +|...+
T Consensus 239 -~~~~lsgHT~~VT-CvrwGG~gliySgS~DrtIkvw~a~dG~~~r 282 (480)
T KOG0271|consen 239 -CVRTLSGHTASVT-CVRWGGEGLIYSGSQDRTIKVWRALDGKLCR 282 (480)
T ss_pred -EEEEeccCccceE-EEEEcCCceEEecCCCceEEEEEccchhHHH
Confidence 3333333333322 456665666667777788888764 454443
No 259
>KOG1036|consensus
Probab=45.82 E-value=2.4e+02 Score=25.80 Aligned_cols=102 Identities=8% Similarity=-0.011 Sum_probs=66.3
Q ss_pred CCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcC
Q psy13635 39 VAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLI 117 (357)
Q Consensus 39 ~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 117 (357)
+....|+.+. +.+++.++.+.. ...+....-.....-+|.. +..+|. ...++.|.+++++++. ...+...-.
T Consensus 23 ~~~~~LLvssWDgslrlYdv~~~-~l~~~~~~~~plL~c~F~d-~~~~~~-G~~dg~vr~~Dln~~~----~~~igth~~ 95 (323)
T KOG1036|consen 23 PSSSDLLVSSWDGSLRLYDVPAN-SLKLKFKHGAPLLDCAFAD-ESTIVT-GGLDGQVRRYDLNTGN----EDQIGTHDE 95 (323)
T ss_pred CcCCcEEEEeccCcEEEEeccch-hhhhheecCCceeeeeccC-CceEEE-eccCceEEEEEecCCc----ceeeccCCC
Confidence 3455677777 456778888662 2333333333344455543 445554 4456899999999986 677776666
Q ss_pred CceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 118 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
...+|..-. .....++-+..++|...+..+
T Consensus 96 ~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~ 125 (323)
T KOG1036|consen 96 GIRCIEYSY-EVGCVISGSWDKTIKFWDPRN 125 (323)
T ss_pred ceEEEEeec-cCCeEEEcccCccEEEEeccc
Confidence 777888774 455667877888888888765
No 260
>KOG0639|consensus
Probab=45.80 E-value=2.9e+02 Score=27.27 Aligned_cols=152 Identities=13% Similarity=0.082 Sum_probs=81.1
Q ss_pred eEEEeCCCCeEEEEeCCCCeEEEEEcCC--CceEEEecC---CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCc
Q psy13635 180 GVAVDWVARNLYWTDTGTDRIEVCRLEG--THRKVLVNT---DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGE 254 (357)
Q Consensus 180 glavD~~~~~lY~td~~~~~I~~~~~~g--~~~~~~~~~---~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~ 254 (357)
.++|...++++|-... +.|-+-+..+ ...-+.-.. .-+..+..-+.|....|.+--.. ..+..-++....
T Consensus 424 AvtIS~~trhVyTgGk--gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGea---stlsiWDLAapT 498 (705)
T KOG0639|consen 424 AVTISNPTRHVYTGGK--GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEA---STLSIWDLAAPT 498 (705)
T ss_pred EEEecCCcceeEecCC--CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEecccc---ceeeeeeccCCC
Confidence 4455556666774333 3444444333 221111111 12345667777765555554433 345545554332
Q ss_pred eEEEe--eCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEE---EEEE-CCEEEEEeCCCCe
Q psy13635 255 RVLLV--KDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFG---ISLL-GDYVYWTDWQRRS 328 (357)
Q Consensus 255 ~~~~~--~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~g---ia~~-~~~ly~td~~~~~ 328 (357)
.+.-. ...-.....|++.+ +.+|.++--..+.|...|+.......- .-.|+.| |.+. .|.=.||---.+.
T Consensus 499 prikaeltssapaCyALa~sp-DakvcFsccsdGnI~vwDLhnq~~Vrq---fqGhtDGascIdis~dGtklWTGGlDnt 574 (705)
T KOG0639|consen 499 PRIKAELTSSAPACYALAISP-DAKVCFSCCSDGNIAVWDLHNQTLVRQ---FQGHTDGASCIDISKDGTKLWTGGLDNT 574 (705)
T ss_pred cchhhhcCCcchhhhhhhcCC-ccceeeeeccCCcEEEEEcccceeeec---ccCCCCCceeEEecCCCceeecCCCccc
Confidence 22211 11112335677774 556777776778888888865433222 2336665 4444 4888899877788
Q ss_pred EEEEeCccCcee
Q psy13635 329 IDRVNKITGNDR 340 (357)
Q Consensus 329 I~~~~~~~g~~~ 340 (357)
|++-|..+|...
T Consensus 575 vRcWDlregrql 586 (705)
T KOG0639|consen 575 VRCWDLREGRQL 586 (705)
T ss_pred eeehhhhhhhhh
Confidence 888887666543
No 261
>KOG0294|consensus
Probab=44.81 E-value=2.6e+02 Score=25.83 Aligned_cols=152 Identities=12% Similarity=0.125 Sum_probs=79.0
Q ss_pred CCceeEEEEcCCCeEEEEe-CCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC--eEEEE
Q psy13635 117 ITPDGLAIDWLTEKLYWTD-SETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR--NLYWT 193 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td-~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~--~lY~t 193 (357)
.....+||++ .|++. +...+|..+++......-.+... . ...+.+-+++... .|. +
T Consensus 44 ~sitavAVs~----~~~aSGssDetI~IYDm~k~~qlg~ll~H----a------------gsitaL~F~~~~S~shLl-S 102 (362)
T KOG0294|consen 44 GSITALAVSG----PYVASGSSDETIHIYDMRKRKQLGILLSH----A------------GSITALKFYPPLSKSHLL-S 102 (362)
T ss_pred cceeEEEecc----eeEeccCCCCcEEEEeccchhhhcceecc----c------------cceEEEEecCCcchhhee-e
Confidence 4567788874 45544 45678999988655432211110 0 1223333332221 222 3
Q ss_pred eCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC-CCceEEEeeCCCCCceEEEEe
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-GGERVLLVKDRLGWPNGITLD 272 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-g~~~~~~~~~~l~~P~giaid 272 (357)
...++.|..-+.+.-....-....-.+.++|+++|. |+|-.+-.+.. .+..-++- |....++ .--..|.-+..+
T Consensus 103 ~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS-~KLALsVg~D~--~lr~WNLV~Gr~a~v~--~L~~~at~v~w~ 177 (362)
T KOG0294|consen 103 GSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPS-GKLALSVGGDQ--VLRTWNLVRGRVAFVL--NLKNKATLVSWS 177 (362)
T ss_pred ecCCCcEEEEEcCCeEEeeeecccccccceeEecCC-CceEEEEcCCc--eeeeehhhcCccceee--ccCCcceeeEEc
Confidence 333455555554332111111223345899999985 88988887753 66666653 3322222 112345667777
Q ss_pred cCCCEEEEEeCCCCeEEEEeCCCC
Q psy13635 273 VDNEKLYWCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 273 ~~~~~lY~~d~~~~~I~~~~~dG~ 296 (357)
+.+++.++.- .++|....++..
T Consensus 178 ~~Gd~F~v~~--~~~i~i~q~d~A 199 (362)
T KOG0294|consen 178 PQGDHFVVSG--RNKIDIYQLDNA 199 (362)
T ss_pred CCCCEEEEEe--ccEEEEEecccH
Confidence 6666666554 456666655543
No 262
>KOG3545|consensus
Probab=43.24 E-value=2.4e+02 Score=25.02 Aligned_cols=140 Identities=19% Similarity=0.230 Sum_probs=76.4
Q ss_pred CCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCC----------ceEEEeCCCC--eEEEEeC
Q psy13635 128 TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHP----------DGVAVDWVAR--NLYWTDT 195 (357)
Q Consensus 128 ~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p----------~glavD~~~~--~lY~td~ 195 (357)
+|.+|+--..+..|.+.++.......- . . +|..+...| -++|+|. +| -||-+..
T Consensus 77 nGs~yynk~~t~~ivky~l~~~~~~~~--~--~---------lp~a~y~~~~~y~~~g~sdiD~avDE-~GLWviYat~~ 142 (249)
T KOG3545|consen 77 NGSLYYNKAGTRNIIKYDLETRTVAGS--A--A---------LPYAGYHNPSPYYWGGHSDIDLAVDE-NGLWVIYATPE 142 (249)
T ss_pred cceEEeeccCCcceEEEEeecceeeee--e--e---------ccccccCCCcccccCCCccccceecc-cceeEEecccc
Confidence 577888887888899999876432110 0 0 122333344 6899994 44 3455666
Q ss_pred CCCeEEEEEcCCCceEEE--ecCCC---CCceEEEEeCCCCEEEEEeCCCC-CCeE-EEEecCCCceEEE---eeCCCCC
Q psy13635 196 GTDRIEVCRLEGTHRKVL--VNTDL---VEPRAITLSPAHGYLFWSDWNEK-RPKI-ERSLLNGGERVLL---VKDRLGW 265 (357)
Q Consensus 196 ~~~~I~~~~~~g~~~~~~--~~~~~---~~P~giavd~~~g~Ly~~d~~~~-~~~I-~~~~~dg~~~~~~---~~~~l~~ 265 (357)
..+.|....++-...++- -...+ ..-.+.-++ |.||..++... ...| +..+...+....+ .....+.
T Consensus 143 ~~g~iv~skLdp~tl~~e~tW~T~~~k~~~~~aF~iC---GvLY~v~S~~~~~~~i~yaydt~~~~~~~~~ipf~N~y~~ 219 (249)
T KOG3545|consen 143 NAGTIVLSKLDPETLEVERTWNTTLPKRSAGNAFMIC---GVLYVVHSYNCTHTQISYAYDTTTGTQERIDLPFPNPYSY 219 (249)
T ss_pred cCCcEEeeccCHHHhheeeeeccccCCCCcCceEEEe---eeeEEEeccccCCceEEEEEEcCCCceecccccccchhhh
Confidence 667777666665322221 11122 223466676 88999998754 2344 3444442222111 1122233
Q ss_pred ceEEEEecCCCEEEEEeCC
Q psy13635 266 PNGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 266 P~giaid~~~~~lY~~d~~ 284 (357)
-..|.-.|.+.+||+=|.+
T Consensus 220 ~~~idYNP~D~~LY~wdng 238 (249)
T KOG3545|consen 220 ATMIDYNPRDRRLYAWDNG 238 (249)
T ss_pred hhccCCCcccceeeEecCC
Confidence 3466666778899977644
No 263
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=42.08 E-value=2.9e+02 Score=29.48 Aligned_cols=99 Identities=15% Similarity=0.184 Sum_probs=56.8
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCceEEE-ecCCCCCceEEEEeCCCCEEEE-EeCCC--CCCeEEEEecCCC--ceEEEee
Q psy13635 187 ARNLYWTDTGTDRIEVCRLEGTHRKVL-VNTDLVEPRAITLSPAHGYLFW-SDWNE--KRPKIERSLLNGG--ERVLLVK 260 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~g~~~~~~-~~~~~~~P~giavd~~~g~Ly~-~d~~~--~~~~I~~~~~dg~--~~~~~~~ 260 (357)
++-.|+.+.. +++..+|.||...+++ +... .....-+++|++.+|-+ +.... ..+.|++.+++.+ ....+--
T Consensus 319 tkiAfv~~~~-~~L~~~D~dG~n~~~ve~~~~-~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~v 396 (912)
T TIGR02171 319 AKLAFRNDVT-GNLAYIDYTKGASRAVEIEDT-ISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPV 396 (912)
T ss_pred eeEEEEEcCC-CeEEEEecCCCCceEEEecCC-CceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeec
Confidence 4455777743 4899999999888776 4322 22223457787777777 33222 1367998888744 3333322
Q ss_pred CCCCCceEEEEec-CCCEEEEEeCCCCe
Q psy13635 261 DRLGWPNGITLDV-DNEKLYWCDAKTDK 287 (357)
Q Consensus 261 ~~l~~P~giaid~-~~~~lY~~d~~~~~ 287 (357)
+.-.-|.=-.+.. +.--+||+|+++++
T Consensus 397 e~aaiprwrv~e~gdt~ivyv~~a~nn~ 424 (912)
T TIGR02171 397 ENAAIPRWRVLENGDTVIVYVSDASNNK 424 (912)
T ss_pred ccccccceEecCCCCeEEEEEcCCCCCc
Confidence 2333344333320 12236999988765
No 264
>KOG1407|consensus
Probab=41.86 E-value=2.6e+02 Score=25.11 Aligned_cols=199 Identities=10% Similarity=0.126 Sum_probs=95.6
Q ss_pred EEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEE
Q psy13635 76 IDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLY 155 (357)
Q Consensus 76 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~ 155 (357)
+..++.+..++.+-.++..|...+...+.+. ..+... ..-..++..|.++.+-+.+. ...|..++.... ++..
T Consensus 70 l~w~~~~~d~~atas~dk~ir~wd~r~~k~~--~~i~~~--~eni~i~wsp~g~~~~~~~k-dD~it~id~r~~--~~~~ 142 (313)
T KOG1407|consen 70 LCWDPKHPDLFATASGDKTIRIWDIRSGKCT--ARIETK--GENINITWSPDGEYIAVGNK-DDRITFIDARTY--KIVN 142 (313)
T ss_pred heeCCCCCcceEEecCCceEEEEEeccCcEE--EEeecc--CcceEEEEcCCCCEEEEecC-cccEEEEEeccc--ceee
Confidence 4566666777777777777777776655310 111111 11122333333333333332 233333332211 1111
Q ss_pred ecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEE
Q psy13635 156 WEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFW 235 (357)
Q Consensus 156 ~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~ 235 (357)
. .+.....+-++.. ..+.+|+...+.+.|+....-.-....-+...-..-..|.+||. |+ |+
T Consensus 143 ~---------------~~~~~e~ne~~w~-~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~-Gr-yf 204 (313)
T KOG1407|consen 143 E---------------EQFKFEVNEISWN-NSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPD-GR-YF 204 (313)
T ss_pred h---------------hcccceeeeeeec-CCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCC-Cc-eE
Confidence 0 1111233445555 67789999999899988876643333323222234457889987 44 33
Q ss_pred EeCCCCCCeEEEEecCCCceEEEeeCCCCCc-eEEEEecCCCEEEEEeCCCCeEEEEeC-CCCCeEEEe
Q psy13635 236 SDWNEKRPKIERSLLNGGERVLLVKDRLGWP-NGITLDVDNEKLYWCDAKTDKIEMIDF-DGNNRRELI 302 (357)
Q Consensus 236 ~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P-~giaid~~~~~lY~~d~~~~~I~~~~~-dG~~~~~i~ 302 (357)
+..... ..+.--+.+--.-...+ ..+.+| .-|.+.+ +|++.-+-+..+.|-.+.. +|...-++.
T Consensus 205 A~GsAD-AlvSLWD~~ELiC~R~i-sRldwpVRTlSFS~-dg~~lASaSEDh~IDIA~vetGd~~~eI~ 270 (313)
T KOG1407|consen 205 ATGSAD-ALVSLWDVDELICERCI-SRLDWPVRTLSFSH-DGRMLASASEDHFIDIAEVETGDRVWEIP 270 (313)
T ss_pred eecccc-ceeeccChhHhhhheee-ccccCceEEEEecc-CcceeeccCccceEEeEecccCCeEEEee
Confidence 332211 22222222211111111 345666 5677764 5555555556667766664 555555443
No 265
>KOG0306|consensus
Probab=41.38 E-value=4.3e+02 Score=27.48 Aligned_cols=240 Identities=13% Similarity=0.099 Sum_probs=125.4
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc-----
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL----- 146 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~----- 146 (357)
...+..|-| +++..+....+|.+..+++......+ .+...-.....++.-| ++.=++|-+..++|.-.+.
T Consensus 414 y~l~~~Fvp-gd~~Iv~G~k~Gel~vfdlaS~~l~E---ti~AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l~~~ 488 (888)
T KOG0306|consen 414 YILASKFVP-GDRYIVLGTKNGELQVFDLASASLVE---TIRAHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKLVVS 488 (888)
T ss_pred cEEEEEecC-CCceEEEeccCCceEEEEeehhhhhh---hhhccccceeeeeecC-CCCceEEecCCcEEEEEeEEEEec
Confidence 344555555 34444555667777777777665322 1111123456667765 4556677777776665442
Q ss_pred -CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCc-eEE
Q psy13635 147 -DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEP-RAI 224 (357)
Q Consensus 147 -~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P-~gi 224 (357)
.|+..+++- +.+.|-+-+ + ...-.+++.|.+ ++....--++++.++.+|.-..-.-.-+. .-| ..+
T Consensus 489 ~~gt~~k~ls---l~~~rtLel---~----ddvL~v~~Spdg-k~LaVsLLdnTVkVyflDtlKFflsLYGH-kLPV~sm 556 (888)
T KOG0306|consen 489 VPGTQKKVLS---LKHTRTLEL---E----DDVLCVSVSPDG-KLLAVSLLDNTVKVYFLDTLKFFLSLYGH-KLPVLSM 556 (888)
T ss_pred cCcccceeee---eccceEEec---c----ccEEEEEEcCCC-cEEEEEeccCeEEEEEecceeeeeeeccc-ccceeEE
Confidence 233333221 011111111 0 133445666544 44444444567777777764332222221 223 467
Q ss_pred EEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEE--e
Q psy13635 225 TLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRREL--I 302 (357)
Q Consensus 225 avd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i--~ 302 (357)
.++|+ +.|.+|-....+-+||-.+. |.-...+... -.....+.+- ...++||+-.+.+.|...| |.+-..+ +
T Consensus 557 DIS~D-SklivTgSADKnVKiWGLdF-GDCHKS~fAH-dDSvm~V~F~-P~~~~FFt~gKD~kvKqWD--g~kFe~iq~L 630 (888)
T KOG0306|consen 557 DISPD-SKLIVTGSADKNVKIWGLDF-GDCHKSFFAH-DDSVMSVQFL-PKTHLFFTCGKDGKVKQWD--GEKFEEIQKL 630 (888)
T ss_pred eccCC-cCeEEeccCCCceEEecccc-chhhhhhhcc-cCceeEEEEc-ccceeEEEecCcceEEeec--hhhhhhheee
Confidence 77775 67778776654344544433 2223333221 1233556665 4788999998888888775 4433222 2
Q ss_pred cCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 303 NENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 303 ~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
.........+++. .|...++.+...+|+....
T Consensus 631 ~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 631 DGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWER 663 (888)
T ss_pred ccchheeeeeEEcCCCCeEEeccCCceeEeeec
Confidence 2345566778887 4556666666567766554
No 266
>KOG1645|consensus
Probab=40.67 E-value=2.2e+02 Score=27.12 Aligned_cols=94 Identities=5% Similarity=-0.105 Sum_probs=60.4
Q ss_pred EEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeE
Q psy13635 52 IRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKL 131 (357)
Q Consensus 52 i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~l 131 (357)
++.++-..=++..++......+.++++.+.++-|...-..+..|..+++.....+ ..... -..+.+.+.|-.+.+.
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~v--ssy~a--~~~~wSC~wDlde~h~ 250 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVV--SSYIA--YNQIWSCCWDLDERHV 250 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceee--eheec--cCCceeeeeccCCcce
Confidence 4444433322333444455577889998877766666666678998888877421 11222 2568888888777766
Q ss_pred EEEeCCCCEEEEEEcCCC
Q psy13635 132 YWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 132 y~td~~~~~I~~~~~~g~ 149 (357)
.++--.+|.|+++++...
T Consensus 251 IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 251 IYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred eEEeccCceEEEEEccCC
Confidence 666667889999887543
No 267
>PF14339 DUF4394: Domain of unknown function (DUF4394)
Probab=40.24 E-value=2.6e+02 Score=24.62 Aligned_cols=72 Identities=15% Similarity=0.026 Sum_probs=49.1
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE-----eCCc-CCceeEEEEcCCCeEEEEeCCCCEEEE
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-----TNGL-ITPDGLAIDWLTEKLYWTDSETNKLEV 143 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-----~~~~-~~p~glavd~~~~~ly~td~~~~~I~~ 143 (357)
-....||||-|.++.||=.. ..++||.++..... -+.+ ...+ ..+.|+.|+|.-++|.+... .++=.|
T Consensus 26 ge~l~GID~Rpa~G~LYgl~-~~g~lYtIn~~tG~----aT~vg~s~~~~al~g~~~gvDFNP~aDRlRvvs~-~GqNlR 99 (236)
T PF14339_consen 26 GESLVGIDFRPANGQLYGLG-STGRLYTINPATGA----ATPVGASPLTVALSGTAFGVDFNPAADRLRVVSN-TGQNLR 99 (236)
T ss_pred CCeEEEEEeecCCCCEEEEe-CCCcEEEEECCCCe----EEEeecccccccccCceEEEecCcccCcEEEEcc-CCcEEE
Confidence 45789999999999999773 44789999988764 2222 1112 23678888888888877654 344455
Q ss_pred EEcC
Q psy13635 144 SSLD 147 (357)
Q Consensus 144 ~~~~ 147 (357)
++++
T Consensus 100 ~npd 103 (236)
T PF14339_consen 100 LNPD 103 (236)
T ss_pred ECCC
Confidence 5555
No 268
>KOG2055|consensus
Probab=39.87 E-value=3.6e+02 Score=26.19 Aligned_cols=197 Identities=11% Similarity=0.048 Sum_probs=87.8
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
.....+.+++....|.++. -++++..+..||+....+-+.-+.. .+ ....++.+.+....++...
T Consensus 214 ~~I~sv~FHp~~plllvaG-~d~~lrifqvDGk~N~~lqS~~l~~-fP-------------i~~a~f~p~G~~~i~~s~r 278 (514)
T KOG2055|consen 214 GGITSVQFHPTAPLLLVAG-LDGTLRIFQVDGKVNPKLQSIHLEK-FP-------------IQKAEFAPNGHSVIFTSGR 278 (514)
T ss_pred CCceEEEecCCCceEEEec-CCCcEEEEEecCccChhheeeeecc-Cc-------------cceeeecCCCceEEEeccc
Confidence 4567888997555555444 4678888888887655433222110 01 1122333333323333333
Q ss_pred CCeEEEEEcCCCceEEEecC-CCC--CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEec
Q psy13635 197 TDRIEVCRLEGTHRKVLVNT-DLV--EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDV 273 (357)
Q Consensus 197 ~~~I~~~~~~g~~~~~~~~~-~~~--~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~ 273 (357)
....+..|+.......+..- +.+ .-.-..|++... |++-.+.. +.|............-.. --....+++++
T Consensus 279 rky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~--fia~~G~~-G~I~lLhakT~eli~s~K-ieG~v~~~~fs- 353 (514)
T KOG2055|consen 279 RKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSN--FIAIAGNN-GHIHLLHAKTKELITSFK-IEGVVSDFTFS- 353 (514)
T ss_pred ceEEEEeeccccccccccCCCCcccchhheeEecCCCC--eEEEcccC-ceEEeehhhhhhhhheee-eccEEeeEEEe-
Confidence 33445555543322222110 011 112233444333 22222321 444444332211100000 00224566776
Q ss_pred CCCEEEEEeCCCCeEEEEeCCCCCeEE-EecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEe
Q psy13635 274 DNEKLYWCDAKTDKIEMIDFDGNNRRE-LINENLPHVFGISLL-GDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 274 ~~~~lY~~d~~~~~I~~~~~dG~~~~~-i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~ 333 (357)
++++..|+-.+.+.|+..++.-..... ..-++.-+-..++.. ++..+-+-+..|-|...+
T Consensus 354 Sdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd 415 (514)
T KOG2055|consen 354 SDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYD 415 (514)
T ss_pred cCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEec
Confidence 444555555566788888876653322 222334455566665 345444445555544444
No 269
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=39.79 E-value=3.8e+02 Score=26.34 Aligned_cols=154 Identities=14% Similarity=0.087 Sum_probs=71.2
Q ss_pred CCeEEEEeC----CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC
Q psy13635 187 ARNLYWTDT----GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR 262 (357)
Q Consensus 187 ~~~lY~td~----~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~ 262 (357)
.+.||+... .......+|.+|..+-.+......... +-.- .+|.+++.... .+..+++.|......-...
T Consensus 113 ~~gl~~~~~~~~~~~~~~~~iD~~G~Vrw~~~~~~~~~~~-~~~l-~nG~ll~~~~~----~~~e~D~~G~v~~~~~l~~ 186 (477)
T PF05935_consen 113 EDGLYFVNGNDWDSSSYTYLIDNNGDVRWYLPLDSGSDNS-FKQL-PNGNLLIGSGN----RLYEIDLLGKVIWEYDLPG 186 (477)
T ss_dssp TT-EEEEEETT--BEEEEEEEETTS-EEEEE-GGGT--SS-EEE--TTS-EEEEEBT----EEEEE-TT--EEEEEE--T
T ss_pred CCcEEEEeCCCCCCCceEEEECCCccEEEEEccCccccce-eeEc-CCCCEEEecCC----ceEEEcCCCCEEEeeecCC
Confidence 445555544 334677777778766554332211111 3333 35777777653 7888888877444322111
Q ss_pred -C-CCceEEEEecCCCEEEEEeC------------CCCeEEEEeCCCCCeEEEe--------------------------
Q psy13635 263 -L-GWPNGITLDVDNEKLYWCDA------------KTDKIEMIDFDGNNRRELI-------------------------- 302 (357)
Q Consensus 263 -l-~~P~giaid~~~~~lY~~d~------------~~~~I~~~~~dG~~~~~i~-------------------------- 302 (357)
. ..=+.+...+.++.|..+.. ....|..++.+|.-....-
T Consensus 187 ~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~ 266 (477)
T PF05935_consen 187 GYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVDPTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGG 266 (477)
T ss_dssp TEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE-TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SST
T ss_pred cccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEECCCCCEEEEEehHHhCCcccccccccccccccccCCC
Confidence 0 11133444432223332220 1234555555553221110
Q ss_pred cCCCCceEEEEEEC--CEEEEEeCCCCeEEEEeCccCceeEEEecc
Q psy13635 303 NENLPHVFGISLLG--DYVYWTDWQRRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 303 ~~~~~~p~gia~~~--~~ly~td~~~~~I~~~~~~~g~~~~~i~~~ 346 (357)
.....|..++.+++ +.|.++......|++++..+++..-++..+
T Consensus 267 ~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~ 312 (477)
T PF05935_consen 267 GRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPP 312 (477)
T ss_dssp TSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-S
T ss_pred CCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCC
Confidence 01234778899985 899999999999999997788887777554
No 270
>KOG0283|consensus
Probab=39.11 E-value=4.6e+02 Score=27.16 Aligned_cols=128 Identities=8% Similarity=-0.052 Sum_probs=77.1
Q ss_pred eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc-CCceeEEEEcCCCeEEEEeCCCCEEEEE
Q psy13635 66 IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-ITPDGLAIDWLTEKLYWTDSETNKLEVS 144 (357)
Q Consensus 66 ~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~p~glavd~~~~~ly~td~~~~~I~~~ 144 (357)
..........|+|.|.+++-|.+..-+++++-.++.... .+.-..+ .-..++++-|. |+-.+.-+-+|....+
T Consensus 405 ~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~-----Vv~W~Dl~~lITAvcy~Pd-Gk~avIGt~~G~C~fY 478 (712)
T KOG0283|consen 405 VFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK-----VVDWNDLRDLITAVCYSPD-GKGAVIGTFNGYCRFY 478 (712)
T ss_pred EEecCCeeEEEEecccCCCcEeecccccceEEeecCcCe-----eEeehhhhhhheeEEeccC-CceEEEEEeccEEEEE
Confidence 345666789999999999999999999998888876653 2222222 34677888875 5555555556777777
Q ss_pred EcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC-eEEEEeCCCCeEEEEEcCCC
Q psy13635 145 SLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR-NLYWTDTGTDRIEVCRLEGT 208 (357)
Q Consensus 145 ~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~-~lY~td~~~~~I~~~~~~g~ 208 (357)
+..|...+.-....+.+.+ ..+-....|+-+.+..- +|.||-. ..+|+.++....
T Consensus 479 ~t~~lk~~~~~~I~~~~~K--------k~~~~rITG~Q~~p~~~~~vLVTSn-DSrIRI~d~~~~ 534 (712)
T KOG0283|consen 479 DTEGLKLVSDFHIRLHNKK--------KKQGKRITGLQFFPGDPDEVLVTSN-DSRIRIYDGRDK 534 (712)
T ss_pred EccCCeEEEeeeEeeccCc--------cccCceeeeeEecCCCCCeEEEecC-CCceEEEeccch
Confidence 7766543322111111000 11112456666654443 4666644 468888876433
No 271
>KOG2919|consensus
Probab=38.34 E-value=3.3e+02 Score=25.28 Aligned_cols=165 Identities=10% Similarity=-0.002 Sum_probs=92.5
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEc--CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSL--DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~--~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
+.....+++.+.+..||-.. +..|.++++ .|....+...-...+ .++..-...+|+.|.+-.++-.
T Consensus 158 ~taAhsL~Fs~DGeqlfaGy--krcirvFdt~RpGr~c~vy~t~~~~k----------~gq~giisc~a~sP~~~~~~a~ 225 (406)
T KOG2919|consen 158 YTAAHSLQFSPDGEQLFAGY--KRCIRVFDTSRPGRDCPVYTTVTKGK----------FGQKGIISCFAFSPMDSKTLAV 225 (406)
T ss_pred hhhheeEEecCCCCeEeecc--cceEEEeeccCCCCCCcchhhhhccc----------ccccceeeeeeccCCCCcceee
Confidence 45677899999899998766 567888776 354443321100000 0111223456777777777766
Q ss_pred eCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee----CCCCCceEE
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK----DRLGWPNGI 269 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~----~~l~~P~gi 269 (357)
.....++-...-++...-.+..+.-....-+...+.+.+||.-.... .+|..-++.-....+... ...++=.-+
T Consensus 226 gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~--dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~F 303 (406)
T KOG2919|consen 226 GSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKD--DKILCWDIRYSRDPVYALERHVGDTNQRILF 303 (406)
T ss_pred ecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCC--CeEEEEeehhccchhhhhhhhccCccceEEE
Confidence 66556666666666555455444444566677788777777766653 488877765322111100 001111123
Q ss_pred EEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 270 TLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
.+| ..+++..+-...+.|.+-++++
T Consensus 304 Dld-~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 304 DLD-PKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred ecC-CCCceeeccCCCccEEEEecCC
Confidence 444 3445555555677888888766
No 272
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=36.47 E-value=5.4e+02 Score=27.15 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=23.2
Q ss_pred EEEECCEEEEEeCCCCeEEEEeCccCceeEE
Q psy13635 312 ISLLGDYVYWTDWQRRSIDRVNKITGNDREV 342 (357)
Q Consensus 312 ia~~~~~ly~td~~~~~I~~~~~~~g~~~~~ 342 (357)
+...++.+|+.-...+.++.+|+.+|+.+-.
T Consensus 687 l~TagglvF~~gt~d~~l~A~D~~tGk~lW~ 717 (764)
T TIGR03074 687 LATAGGLVFIGATQDNYLRAYDLSTGKELWK 717 (764)
T ss_pred EEEcCCEEEEEeCCCCEEEEEECCCCceeeE
Confidence 5666788888555668899999888886654
No 273
>KOG4283|consensus
Probab=36.42 E-value=3.4e+02 Score=24.86 Aligned_cols=228 Identities=11% Similarity=0.082 Sum_probs=116.6
Q ss_pred cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC-----CcCC-------
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-----GLIT------- 118 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-----~~~~------- 118 (357)
.|+...+.. .........+...++++|+.+++...+...++.|-..++.-...-+..-.+.. .-..
T Consensus 26 Ril~L~Ln~--d~d~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~ 103 (397)
T KOG4283|consen 26 RILSLQLNN--DKDFVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYA 103 (397)
T ss_pred hhheeeccC--CcceeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceee
Confidence 355555544 22333344467889999999999999999999998888765431011111111 1111
Q ss_pred ceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEec-CCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 119 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-DIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
.+.+..-|...-+|.+.+-.+.+.+.+.+.......+.- +.-= . ---.|-. ....|..+....
T Consensus 104 iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VY----------s-hamSp~a-----~sHcLiA~gtr~ 167 (397)
T KOG4283|consen 104 ISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVY----------S-HAMSPMA-----MSHCLIAAGTRD 167 (397)
T ss_pred eeeeEEeeecCceeecccccceEEEeecccceeeEEeecCceee----------h-hhcChhh-----hcceEEEEecCC
Confidence 222222334445677777777777777665433332210 0000 0 0001211 223555566666
Q ss_pred CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC----------CCceEEEeeC---CCC
Q psy13635 198 DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN----------GGERVLLVKD---RLG 264 (357)
Q Consensus 198 ~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d----------g~~~~~~~~~---~l~ 264 (357)
-.|+-||+......-.+.+.-....++.-+|....+..+-.....-+++-+.-. .+.+..++.. .-.
T Consensus 168 ~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~g 247 (397)
T KOG4283|consen 168 VQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYG 247 (397)
T ss_pred CcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccc
Confidence 689999987554444444445556666667776666555444321233333322 1222222211 123
Q ss_pred CceEEEEecCCCEEEEEeCCCCeEEEEeC-CCCC
Q psy13635 265 WPNGITLDVDNEKLYWCDAKTDKIEMIDF-DGNN 297 (357)
Q Consensus 265 ~P~giaid~~~~~lY~~d~~~~~I~~~~~-dG~~ 297 (357)
..+|++.. +.++-.|+-...+++..-+. .|.+
T Consensus 248 kvngla~t-Sd~~~l~~~gtd~r~r~wn~~~G~n 280 (397)
T KOG4283|consen 248 KVNGLAWT-SDARYLASCGTDDRIRVWNMESGRN 280 (397)
T ss_pred eeeeeeec-ccchhhhhccCccceEEeecccCcc
Confidence 45788886 44444455545556666554 3443
No 274
>KOG0273|consensus
Probab=34.56 E-value=4.5e+02 Score=25.67 Aligned_cols=134 Identities=10% Similarity=0.061 Sum_probs=73.7
Q ss_pred CeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc
Q psy13635 41 AQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP 119 (357)
Q Consensus 41 ~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p 119 (357)
..+|...+ ...++..+.+|.. ....-..-+...++-+.-.+..|.=++ .++.+...+.-... ....-.+...
T Consensus 247 G~~LatG~~~G~~riw~~~G~l-~~tl~~HkgPI~slKWnk~G~yilS~~-vD~ttilwd~~~g~-----~~q~f~~~s~ 319 (524)
T KOG0273|consen 247 GTLLATGSEDGEARIWNKDGNL-ISTLGQHKGPIFSLKWNKKGTYILSGG-VDGTTILWDAHTGT-----VKQQFEFHSA 319 (524)
T ss_pred CCeEEEeecCcEEEEEecCchh-hhhhhccCCceEEEEEcCCCCEEEecc-CCccEEEEeccCce-----EEEeeeeccC
Confidence 34455555 3456777777632 222222333455666654444443222 33344334433221 1111233444
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD 198 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~ 198 (357)
.++.|||.+..=|.+....+.|.++.+++......+..- -+..++|..|+ .+.|.-+.....
T Consensus 320 ~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH----------------~g~V~alk~n~-tg~LLaS~SdD~ 381 (524)
T KOG0273|consen 320 PALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGH----------------HGEVNALKWNP-TGSLLASCSDDG 381 (524)
T ss_pred CccceEEecCceEeecCCCceEEEEEecCCCcceeeecc----------------cCceEEEEECC-CCceEEEecCCC
Confidence 589999999999999999999999998877653332111 12466778885 445665655544
No 275
>PF05345 He_PIG: Putative Ig domain; InterPro: IPR008009 This alignment represents the conserved core region of a ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to Hyalin (IPR003410 from INTERPRO) and the PKD domain (IPR000601 from INTERPRO) suggest an Ig-like fold so this family may be similar in function to the (IPR003791 from INTERPRO) and (IPR003790 from INTERPRO) protein families.
Probab=33.86 E-value=1.1e+02 Score=19.47 Aligned_cols=22 Identities=23% Similarity=0.283 Sum_probs=18.4
Q ss_pred cCCceEEEeCCCCeEEEEeCCC
Q psy13635 176 EHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 176 ~~p~glavD~~~~~lY~td~~~ 197 (357)
.-|.||.+|+..|.|.++-...
T Consensus 11 ~LP~gLs~d~~tG~isGtp~~~ 32 (49)
T PF05345_consen 11 GLPSGLSLDPSTGTISGTPTSS 32 (49)
T ss_pred CCCCcEEEeCCCCEEEeecCCC
Confidence 4799999999999999985543
No 276
>PF14517 Tachylectin: Tachylectin; PDB: 1TL2_A.
Probab=33.63 E-value=3.3e+02 Score=23.87 Aligned_cols=153 Identities=18% Similarity=0.055 Sum_probs=75.2
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEE--cCCCC-cceeEEEEeCC-cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCT--FDGNN-VGSKHNVITNG-LITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~--~~g~~-~~~~~~~~~~~-~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
...-|++.| +++||.... +.+++.. ..+.+ .....+.+..+ -..=..|.+|+ ++.||-.+. .++++|....
T Consensus 35 ~~~~i~~~P-~g~lY~I~~--~~lY~~~~~~~~~~~~~~~~~~Ig~g~W~~F~~i~~d~-~G~LYaV~~-~G~lyR~~~~ 109 (229)
T PF14517_consen 35 NFRDIAAGP-NGRLYAIRN--DGLYRGSPSSSGGNTWDSGSKQIGDGGWNSFKFIFFDP-TGVLYAVTP-DGKLYRHPRP 109 (229)
T ss_dssp T-SEEEE-T-TS-EEEEET--TEEEEES---STT--HHHH-EEEE-S-GGG-SEEEE-T-TS-EEEEET-T-EEEEES--
T ss_pred ccceEEEcC-CceEEEEEC--CceEEecCCccCcccccccCcccccCcccceeEEEecC-CccEEEecc-ccceeeccCC
Confidence 344455666 788998874 3788772 12221 11123344444 44445899995 888997775 5788776543
Q ss_pred CCc--------eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEE-EcCCCc------eEE
Q psy13635 148 GKK--------RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVC-RLEGTH------RKV 212 (357)
Q Consensus 148 g~~--------~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~-~~~g~~------~~~ 212 (357)
... -+.+...+. +...-|-.| .++.||..+... ++.+. .+++.. ...
T Consensus 110 ~~~~~~W~~~~~~~iG~~GW----------------~~f~~vfa~-~~GvLY~i~~dg-~~~~~~~p~~~~~~W~~~s~~ 171 (229)
T PF14517_consen 110 TNGSDNWIGGSGKKIGGTGW----------------NDFDAVFAG-PNGVLYAITPDG-RLYRRYRPDGGSDRWLSGSGL 171 (229)
T ss_dssp -STT--HHH-HSEEEE-SSG----------------GGEEEEEE--TTS-EEEEETTE--EEEE---SSTT--HHHH-EE
T ss_pred CccCcchhhccceecccCCC----------------ccceEEEeC-CCccEEEEcCCC-ceEEeCCCCCCCCccccccce
Confidence 221 122222222 234445555 567888877543 56655 444322 233
Q ss_pred EecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 213 LVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 213 ~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
+...+...+.-|...| +|.||.++.. +.++|-...
T Consensus 172 v~~~gw~~~~~i~~~~-~g~L~~V~~~---G~lyr~~~p 206 (229)
T PF14517_consen 172 VGGGGWDSFHFIFFSP-DGNLWAVKSN---GKLYRGRPP 206 (229)
T ss_dssp EESSSGGGEEEEEE-T-TS-EEEE-ET---TEEEEES--
T ss_pred eccCCcccceEEeeCC-CCcEEEEecC---CEEeccCCc
Confidence 3334556688898887 4999999655 688876644
No 277
>KOG1408|consensus
Probab=33.53 E-value=5.7e+02 Score=26.60 Aligned_cols=111 Identities=14% Similarity=0.052 Sum_probs=58.5
Q ss_pred CCceEEEeCCCCeEEEEeCCCCeEEEEEcCC-CceEEEecCC--CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 177 HPDGVAVDWVARNLYWTDTGTDRIEVCRLEG-THRKVLVNTD--LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 177 ~p~glavD~~~~~lY~td~~~~~I~~~~~~g-~~~~~~~~~~--~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
.-.+++|||..+.+..... ...|..++... +..+.+.... -..+--+.+||. -+|++..... ..+..++.-.+
T Consensus 598 TlYDm~Vdp~~k~v~t~cQ-Drnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPS--giY~atScsd-ktl~~~Df~sg 673 (1080)
T KOG1408|consen 598 TLYDMAVDPTSKLVVTVCQ-DRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPS--GIYLATSCSD-KTLCFVDFVSG 673 (1080)
T ss_pred eEEEeeeCCCcceEEEEec-ccceEEEeccccceeeeecccccCCCceEEEEECCC--ccEEEEeecC-CceEEEEeccc
Confidence 4578999988766654444 45677777764 4444433221 235667888875 3777766543 46666665432
Q ss_pred ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEe
Q psy13635 254 ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMID 292 (357)
Q Consensus 254 ~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~ 292 (357)
.-..-.........|+.+-.+ -+=.++-++.+.|..-.
T Consensus 674 EcvA~m~GHsE~VTG~kF~nD-CkHlISvsgDgCIFvW~ 711 (1080)
T KOG1408|consen 674 ECVAQMTGHSEAVTGVKFLND-CKHLISVSGDGCIFVWK 711 (1080)
T ss_pred hhhhhhcCcchheeeeeeccc-chhheeecCCceEEEEE
Confidence 211111111223456665432 22234445556655544
No 278
>KOG0277|consensus
Probab=33.04 E-value=3.6e+02 Score=24.16 Aligned_cols=64 Identities=9% Similarity=0.008 Sum_probs=35.2
Q ss_pred eEEEEecCCCEEEEEeCCCCeEEEEeC--CCCCeEEEecCCCCceEEEEEE----CCEEEEEeCCCCeEEEEeC
Q psy13635 267 NGITLDVDNEKLYWCDAKTDKIEMIDF--DGNNRRELINENLPHVFGISLL----GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~~~~I~~~~~--dG~~~~~i~~~~~~~p~gia~~----~~~ly~td~~~~~I~~~~~ 334 (357)
.+.+..|....|+-+-++.+....-|. .|.... +... ....++.+ +..+..|....+.|+.-|.
T Consensus 151 y~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~--i~ah--~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDi 220 (311)
T KOG0277|consen 151 YQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS--IEAH--NSEILCCDWSKYNHNVLATGGVDNLVRGWDI 220 (311)
T ss_pred EEEecCCCCCCeEEEccCCceEEEEEecCCCceeE--EEec--cceeEeecccccCCcEEEecCCCceEEEEeh
Confidence 445555666677766666665544444 454443 2211 12333332 4677777777777777665
No 279
>KOG0277|consensus
Probab=30.18 E-value=4.1e+02 Score=23.86 Aligned_cols=122 Identities=8% Similarity=0.012 Sum_probs=65.7
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR 151 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~ 151 (357)
...++++.+..+.+..+-.++|.++-.++.-.. .......+.-....++......+..+.+.+-.++|.-.+.+-...
T Consensus 62 ~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s--~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S 139 (311)
T KOG0277|consen 62 GLFDVAWSENHENQVIAASGDGSLRLFDLTMPS--KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS 139 (311)
T ss_pred ceeEeeecCCCcceEEEEecCceEEEeccCCCC--cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcc
Confidence 345666666666666666777777766643222 112222222233344444445677788887778877766543332
Q ss_pred EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC--eEEEEEcCCCceE
Q psy13635 152 KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD--RIEVCRLEGTHRK 211 (357)
Q Consensus 152 ~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~--~I~~~~~~g~~~~ 211 (357)
...+.. .-.-..+.+..|...+|+-+-++.+ ++.-++..|+...
T Consensus 140 v~Tf~g----------------h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~ 185 (311)
T KOG0277|consen 140 VQTFNG----------------HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS 185 (311)
T ss_pred eEeecC----------------CccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE
Confidence 222111 1112345566677778887777766 4444444565544
No 280
>KOG2096|consensus
Probab=30.07 E-value=4.5e+02 Score=24.38 Aligned_cols=253 Identities=13% Similarity=0.093 Sum_probs=0.0
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC-CcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc---
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-GLITPDGLAIDWLTEKLYWTDSETNKLEVSSL--- 146 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~p~glavd~~~~~ly~td~~~~~I~~~~~--- 146 (357)
....+++|.. +|+-+.+-..++.|+..+++.-...+.+.+-.+ ....|.-+++.+.-+.+.++-...++++++.+
T Consensus 87 ~~vt~~~FsS-dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~ 165 (420)
T KOG2096|consen 87 KEVTDVAFSS-DGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKK 165 (420)
T ss_pred CceeeeEEcC-CCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeec
Q ss_pred -CCCceEEEEecC---CCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC-eEEEEEcCCCceEEEecCCCCCc
Q psy13635 147 -DGKKRKVLYWED---IDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD-RIEVCRLEGTHRKVLVNTDLVEP 221 (357)
Q Consensus 147 -~g~~~~~~~~~~---~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~-~I~~~~~~g~~~~~~~~~~~~~P 221 (357)
||+.....+..+ +.+-+...+ +.+--.++..|+.....+ .|..-++.|.....+-. ....-
T Consensus 166 ~dG~~~~~~v~~D~~~f~~kh~v~~-------------i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idt-nq~~n 231 (420)
T KOG2096|consen 166 TDGSGSHHFVHIDNLEFERKHQVDI-------------INIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDT-NQSSN 231 (420)
T ss_pred ccCCCCcccccccccccchhcccce-------------EEEeecCCceEEEEecCCCcEEEEecCCceeeeecc-ccccc
Q ss_pred eEEEEeCCCCEEEEEeCCCCCCeEE--EEecCCCceEEE----eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 222 RAITLSPAHGYLFWSDWNEKRPKIE--RSLLNGGERVLL----VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~~~~~~I~--~~~~dg~~~~~~----~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
..-+++|.+..|-.+-.... -+++ .+..||+-.++. +...-.....+++. .+.+--++-+..+.+...+.|-
T Consensus 232 ~~aavSP~GRFia~~gFTpD-VkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFs-n~S~r~vtvSkDG~wriwdtdV 309 (420)
T KOG2096|consen 232 YDAAVSPDGRFIAVSGFTPD-VKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFS-NSSTRAVTVSKDGKWRIWDTDV 309 (420)
T ss_pred cceeeCCCCcEEEEecCCCC-ceEEEEEeccCcchhhhhhhheeccchhheeeeeeC-CCcceeEEEecCCcEEEeeccc
Q ss_pred -----------CCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeE
Q psy13635 296 -----------NNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 296 -----------~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
..-...+......|.-|+.. +|.++-...++ .+..+..++|+...
T Consensus 310 rY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs-~l~~~~se~g~~~~ 366 (420)
T KOG2096|consen 310 RYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGS-DLKVFASEDGKDYP 366 (420)
T ss_pred eEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCC-ceEEEEcccCccch
No 281
>KOG0275|consensus
Probab=28.54 E-value=4.8e+02 Score=24.16 Aligned_cols=84 Identities=8% Similarity=0.026 Sum_probs=47.0
Q ss_pred CCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCC--CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCC
Q psy13635 186 VARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLV--EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRL 263 (357)
Q Consensus 186 ~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~--~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l 263 (357)
.+-.-++.....+.|+.+++.|...+...++.-+ .--..+++|.+..+|-.-.. +.++.+..-.+..+..+...-
T Consensus 403 Knpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED---~vlYCF~~~sG~LE~tl~VhE 479 (508)
T KOG0275|consen 403 KNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGED---GVLYCFSVLSGKLERTLPVHE 479 (508)
T ss_pred CCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccC---cEEEEEEeecCceeeeeeccc
Confidence 3333333444456788888888777666543211 22345677877778877655 477777655444433333333
Q ss_pred CCceEEEEe
Q psy13635 264 GWPNGITLD 272 (357)
Q Consensus 264 ~~P~giaid 272 (357)
..|-||+-.
T Consensus 480 kdvIGl~HH 488 (508)
T KOG0275|consen 480 KDVIGLTHH 488 (508)
T ss_pred ccccccccC
Confidence 445566554
No 282
>KOG0296|consensus
Probab=28.39 E-value=5.1e+02 Score=24.42 Aligned_cols=288 Identities=11% Similarity=0.051 Sum_probs=137.0
Q ss_pred EEeecCCCCeEEEEEeC-Cc-EEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 33 YALSHHVAAQMLLFATS-KD-IRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~-~~-i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
||++.+|..+ |..+.. .+ -...+...+...-.+...-.....+.|.+ ++.+.-+...++.|+........ + +-
T Consensus 68 Favsl~P~~~-l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fsh-dgtlLATGdmsG~v~v~~~stg~--~-~~ 142 (399)
T KOG0296|consen 68 FAVSLHPNNN-LVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSH-DGTLLATGDMSGKVLVFKVSTGG--E-QW 142 (399)
T ss_pred EEEEeCCCCc-eEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEcc-CceEEEecCCCccEEEEEcccCc--e-EE
Confidence 4555555333 333332 22 12344444343333444555678888887 56666666667777777766553 2 33
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC-ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK-KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~-~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
.+.......+=+..+| ...++.+-...+.+....++.. ..+++.... .|.. .+.| .| .+++
T Consensus 143 ~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~--~~ct-------~G~f-~p-------dGKr 204 (399)
T KOG0296|consen 143 KLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALCKVMSGHN--SPCT-------CGEF-IP-------DGKR 204 (399)
T ss_pred EeecccCceEEEEecc-cccEEEeecCCCcEEEEECCCcceeeEecCCC--CCcc-------cccc-cC-------CCce
Confidence 3333444556677776 5667777778889999988764 444432211 1100 1111 12 2334
Q ss_pred EEEEeCCCCeEEEEEcCCCceEEEec--CCCCC--------ceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe
Q psy13635 190 LYWTDTGTDRIEVCRLEGTHRKVLVN--TDLVE--------PRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV 259 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~~~~~~~--~~~~~--------P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~ 259 (357)
+. +-...+.|.+-++........+. +++.. +.-+.-....+..|++.... +++...+-. +.. .+.
T Consensus 205 ~~-tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~s--gKVv~~~n~-~~~-~l~ 279 (399)
T KOG0296|consen 205 IL-TGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGS--GKVVNCNNG-TVP-ELK 279 (399)
T ss_pred EE-EEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEcccc--ceEEEecCC-CCc-ccc
Confidence 43 44445677777765433222222 11111 11111112334555555442 344433331 111 010
Q ss_pred eCCCCCceEEEEecC--CCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEE---EEEECCEEEEEeCCCCeEEEEeC
Q psy13635 260 KDRLGWPNGITLDVD--NEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFG---ISLLGDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 260 ~~~l~~P~giaid~~--~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~g---ia~~~~~ly~td~~~~~I~~~~~ 334 (357)
.+.-..-..+..-+. .=.|.-+-.-.++|...|+.....+.+. .|+.| +.+.+.....|...++.|+..+.
T Consensus 280 ~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c----~he~~V~~l~w~~t~~l~t~c~~g~v~~wDa 355 (399)
T KOG0296|consen 280 PSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC----EHEDGVTKLKWLNTDYLLTACANGKVRQWDA 355 (399)
T ss_pred ccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheec----cCCCceEEEEEcCcchheeeccCceEEeeec
Confidence 000000001111000 1112222233466777776665554333 34444 34445333344456689999999
Q ss_pred ccCceeEEEecccCCcee
Q psy13635 335 ITGNDREVIIERSCTGVT 352 (357)
Q Consensus 335 ~~g~~~~~i~~~l~~p~~ 352 (357)
.+|+.+.....+-....+
T Consensus 356 RtG~l~~~y~GH~~~Il~ 373 (399)
T KOG0296|consen 356 RTGQLKFTYTGHQMGILD 373 (399)
T ss_pred cccceEEEEecCchheeE
Confidence 899988877655444433
No 283
>KOG0640|consensus
Probab=28.00 E-value=4.9e+02 Score=24.07 Aligned_cols=245 Identities=9% Similarity=0.055 Sum_probs=0.0
Q ss_pred ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEE
Q psy13635 63 PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLE 142 (357)
Q Consensus 63 ~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~ 142 (357)
...+.........++|+| .+.|..+...++.|.-++..-.. ...-............|.++| +|...........+.
T Consensus 165 IRTlYDH~devn~l~FHP-re~ILiS~srD~tvKlFDfsK~s-aKrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~r 241 (430)
T KOG0640|consen 165 IRTLYDHVDEVNDLDFHP-RETILISGSRDNTVKLFDFSKTS-AKRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTLR 241 (430)
T ss_pred EeehhhccCcccceeecc-hhheEEeccCCCeEEEEecccHH-HHHHHHHhhccceeeeEeecC-CCceEEEecCCCcee
Q ss_pred EEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEE-cCCCceEEEecCCCCCc
Q psy13635 143 VSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCR-LEGTHRKVLVNTDLVEP 221 (357)
Q Consensus 143 ~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~-~~g~~~~~~~~~~~~~P 221 (357)
..+.+.-..-+-...+ .+--.....+... .+++||+|....+.|...| ..++-.+++.......-
T Consensus 242 lYdv~T~QcfvsanPd-------------~qht~ai~~V~Ys-~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gse 307 (430)
T KOG0640|consen 242 LYDVNTYQCFVSANPD-------------DQHTGAITQVRYS-STGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSE 307 (430)
T ss_pred EEeccceeEeeecCcc-------------cccccceeEEEec-CCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCce
Q ss_pred eEEEEeCCCCEEEEEeCCCC---------CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEe
Q psy13635 222 RAITLSPAHGYLFWSDWNEK---------RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMID 292 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~~~---------~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~ 292 (357)
-.-++-..+|+-..+..... +..+.+..-.|....+..... -.++..++.+.+-|..++.+..-|
T Consensus 308 vcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtq------AvFNhtEdyVl~pDEas~slcsWd 381 (430)
T KOG0640|consen 308 VCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQ------AVFNHTEDYVLFPDEASNSLCSWD 381 (430)
T ss_pred eeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhh------hhhcCccceEEccccccCceeecc
Q ss_pred CCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCCCCeEE
Q psy13635 293 FDGNNRRELINENLPHVFGISLL--GDYVYWTDWQRRSID 330 (357)
Q Consensus 293 ~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~~~I~ 330 (357)
-....+..+..-+-+.+.---+. .+-.|.|-+...+.+
T Consensus 382 aRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raR 421 (430)
T KOG0640|consen 382 ARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRAR 421 (430)
T ss_pred ccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceee
No 284
>PF14251 DUF4346: Domain of unknown function (DUF4346)
Probab=27.97 E-value=1.9e+02 Score=22.36 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=20.6
Q ss_pred CceEEEeCCCCeEEEEeCCCCeEEEEEcCCC
Q psy13635 178 PDGVAVDWVARNLYWTDTGTDRIEVCRLEGT 208 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~~I~~~~~~g~ 208 (357)
-.|+|+||.+|.+.-+.....+-...-..|+
T Consensus 42 ~~Gla~Dpetge~i~~~g~~~r~~~~~~~Gr 72 (119)
T PF14251_consen 42 DKGLAVDPETGEVIPCRGKVKRTPSIVFKGR 72 (119)
T ss_pred cccceeCCCCCCEEEEecCCCCceeEEEecC
Confidence 4589999999998877765444333333443
No 285
>KOG3545|consensus
Probab=27.87 E-value=4.3e+02 Score=23.43 Aligned_cols=141 Identities=16% Similarity=0.180 Sum_probs=76.5
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc----------eeEEEEcCCCe--EEEEeCCCCEEEEEEcCCC
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP----------DGLAIDWLTEK--LYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p----------~glavd~~~~~--ly~td~~~~~I~~~~~~g~ 149 (357)
+|.+|+-...+..|-+.++..........+-..+...+ ..+|+|. .+. ||-+..+.+.|....++-.
T Consensus 77 nGs~yynk~~t~~ivky~l~~~~~~~~~~lp~a~y~~~~~y~~~g~sdiD~avDE-~GLWviYat~~~~g~iv~skLdp~ 155 (249)
T KOG3545|consen 77 NGSLYYNKAGTRNIIKYDLETRTVAGSAALPYAGYHNPSPYYWGGHSDIDLAVDE-NGLWVIYATPENAGTIVLSKLDPE 155 (249)
T ss_pred cceEEeeccCCcceEEEEeecceeeeeeeccccccCCCcccccCCCccccceecc-cceeEEecccccCCcEEeeccCHH
Confidence 68888888778888888887743111122222334445 6789994 332 3446667777776666653
Q ss_pred ce--EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC---eE-EEEEcCC-CceEEEe--cCCCCC
Q psy13635 150 KR--KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD---RI-EVCRLEG-THRKVLV--NTDLVE 220 (357)
Q Consensus 150 ~~--~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~---~I-~~~~~~g-~~~~~~~--~~~~~~ 220 (357)
.. +......+.+++ .-++..| =|.||..++... .| ...+... .....-+ ......
T Consensus 156 tl~~e~tW~T~~~k~~-------------~~~aF~i---CGvLY~v~S~~~~~~~i~yaydt~~~~~~~~~ipf~N~y~~ 219 (249)
T KOG3545|consen 156 TLEVERTWNTTLPKRS-------------AGNAFMI---CGVLYVVHSYNCTHTQISYAYDTTTGTQERIDLPFPNPYSY 219 (249)
T ss_pred HhheeeeeccccCCCC-------------cCceEEE---eeeeEEEeccccCCceEEEEEEcCCCceecccccccchhhh
Confidence 22 222222222111 1123333 358898887643 34 3455553 2221211 112334
Q ss_pred ceEEEEeCCCCEEEEEeCC
Q psy13635 221 PRAITLSPAHGYLFWSDWN 239 (357)
Q Consensus 221 P~giavd~~~g~Ly~~d~~ 239 (357)
-..|.-.|.+.+||.=|.+
T Consensus 220 ~~~idYNP~D~~LY~wdng 238 (249)
T KOG3545|consen 220 ATMIDYNPRDRRLYAWDNG 238 (249)
T ss_pred hhccCCCcccceeeEecCC
Confidence 4567777888899988866
No 286
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=27.51 E-value=1.6e+02 Score=18.32 Aligned_cols=27 Identities=22% Similarity=0.462 Sum_probs=17.9
Q ss_pred eEEEEeCCCC---EEEEEeCCCCCCeEEEEecC
Q psy13635 222 RAITLSPAHG---YLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 222 ~giavd~~~g---~Ly~~d~~~~~~~I~~~~~d 251 (357)
+.+.++|..+ .|.|++.. +++..+++.
T Consensus 4 R~~kFsP~~~~~DLL~~~E~~---g~vhi~D~R 33 (43)
T PF10313_consen 4 RCCKFSPEPGGNDLLAWAEHQ---GRVHIVDTR 33 (43)
T ss_pred EEEEeCCCCCcccEEEEEccC---CeEEEEEcc
Confidence 4456665444 78888766 577777766
No 287
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=25.96 E-value=6.4e+02 Score=24.74 Aligned_cols=116 Identities=13% Similarity=0.008 Sum_probs=58.6
Q ss_pred CCCeEEEEeCCCCeEEEEEcCCCceEEEecCC--CCCceEEEEeCCCCEEEEEeC------CCC----CCeEEEEecCCC
Q psy13635 186 VARNLYWTDTGTDRIEVCRLEGTHRKVLVNTD--LVEPRAITLSPAHGYLFWSDW------NEK----RPKIERSLLNGG 253 (357)
Q Consensus 186 ~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~--~~~P~giavd~~~g~Ly~~d~------~~~----~~~I~~~~~dg~ 253 (357)
.+|.+++... ..+..+++.|+......... ...=..+...|.+..|..+.. ... .-.|..++.+|.
T Consensus 157 ~nG~ll~~~~--~~~~e~D~~G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd~tG~ 234 (477)
T PF05935_consen 157 PNGNLLIGSG--NRLYEIDLLGKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVDPTGE 234 (477)
T ss_dssp TTS-EEEEEB--TEEEEE-TT--EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE-TTS-
T ss_pred CCCCEEEecC--CceEEEcCCCCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEECCCCC
Confidence 4667776665 68888888888544432211 011245666665333443431 100 346666765554
Q ss_pred ceEEEeeC--------------------------CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec
Q psy13635 254 ERVLLVKD--------------------------RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN 303 (357)
Q Consensus 254 ~~~~~~~~--------------------------~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~ 303 (357)
...+.-.. .--+.+++..|+.++.|.++-...+.|..++.......-++.
T Consensus 235 vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg 310 (477)
T PF05935_consen 235 VVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILG 310 (477)
T ss_dssp EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES
T ss_pred EEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeC
Confidence 33332100 012457999998899999999988999999966555555554
No 288
>PRK10115 protease 2; Provisional
Probab=25.53 E-value=7.7e+02 Score=25.55 Aligned_cols=237 Identities=12% Similarity=0.087 Sum_probs=115.8
Q ss_pred cCCCCeEEEEEeC------CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC-----CCCeEEEEEcCCCCc
Q psy13635 37 HHVAAQMLLFATS------KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH-----GTEMISCCTFDGNNV 105 (357)
Q Consensus 37 ~~~~~~~l~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~-----~~~~I~~~~~~g~~~ 105 (357)
.++...+|.++.+ ..|+++|+.++......++... ..+++.++++.+|++-. ....+++..+....
T Consensus 134 ~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~- 210 (686)
T PRK10115 134 ITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPA- 210 (686)
T ss_pred ECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCCh-
Confidence 3455556777652 2477888865432222233332 45788877888888733 22578888887652
Q ss_pred ceeEEEEeCCcCCceeE--EEEcCCCeEEEEeC--CCCEEEEEEc---CCCceEEEEecCCCCcceeeeeccCcccccCC
Q psy13635 106 GSKHNVITNGLITPDGL--AIDWLTEKLYWTDS--ETNKLEVSSL---DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHP 178 (357)
Q Consensus 106 ~~~~~~~~~~~~~p~gl--avd~~~~~ly~td~--~~~~I~~~~~---~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p 178 (357)
+...++..+...+..+ .....++.+.+... .++.+..+.. ++.. ..+.... . .
T Consensus 211 -~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~----------------~--~ 270 (686)
T PRK10115 211 -SQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEP-FVFLPRR----------------K--D 270 (686)
T ss_pred -hHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCc-eEEEECC----------------C--C
Confidence 1123333322222222 12112333333221 1233444332 2221 1111110 0 1
Q ss_pred ceEEEeCCCCeEEEEeCC---CCeEEEEEcCC-CceEEEecCC-CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 179 DGVAVDWVARNLYWTDTG---TDRIEVCRLEG-THRKVLVNTD-LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 179 ~glavD~~~~~lY~td~~---~~~I~~~~~~g-~~~~~~~~~~-~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
.-..+...++.+|+.... ..+|.++++++ ..-+.++... -....++.+. .+.|+++.......++..++.++.
T Consensus 271 ~~~~~~~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~l~~~~~~~g~~~l~~~~~~~~ 348 (686)
T PRK10115 271 HEYSLDHYQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF--TDWLVVEERQRGLTSLRQINRKTR 348 (686)
T ss_pred CEEEEEeCCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE--CCEEEEEEEeCCEEEEEEEcCCCC
Confidence 111223345677775432 23788877763 2234555442 2356677777 467777765433467888887765
Q ss_pred ceEEEeeCCCCCceEEE---E--ecCCCEEEEEe---CCCCeEEEEeCCCCCeEEE
Q psy13635 254 ERVLLVKDRLGWPNGIT---L--DVDNEKLYWCD---AKTDKIEMIDFDGNNRREL 301 (357)
Q Consensus 254 ~~~~~~~~~l~~P~gia---i--d~~~~~lY~~d---~~~~~I~~~~~dG~~~~~i 301 (357)
....+. +..|.+++ . +..++.++++- .....++.++.++...+.+
T Consensus 349 ~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~~~l 401 (686)
T PRK10115 349 EVIGIA---FDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVL 401 (686)
T ss_pred ceEEec---CCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcEEEE
Confidence 444332 12232222 2 23345565443 2446889999876544433
No 289
>PF14759 Reductase_C: Reductase C-terminal; PDB: 3FG2_P 3LXD_A 2YVG_A 2GR1_A 2GQW_A 2GR3_A 2YVF_A 1F3P_A 2GR0_A 2GR2_A ....
Probab=24.81 E-value=1.4e+02 Score=21.38 Aligned_cols=27 Identities=33% Similarity=0.644 Sum_probs=18.1
Q ss_pred EEEeCCCCeEEEEEcCCCceEEEecCC
Q psy13635 191 YWTDTGTDRIEVCRLEGTHRKVLVNTD 217 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~~~~~~~~ 217 (357)
||||....+|+.+...+..-++++.++
T Consensus 2 FWSdQ~~~~iq~~G~~~~~~~~v~rg~ 28 (85)
T PF14759_consen 2 FWSDQYGVRIQIAGLPGGADEVVVRGD 28 (85)
T ss_dssp EEEEETTEEEEEEE-STTSSEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCCEEEEEcc
Confidence 799999889999886554444444433
No 290
>PF14517 Tachylectin: Tachylectin; PDB: 1TL2_A.
Probab=24.58 E-value=4.8e+02 Score=22.86 Aligned_cols=139 Identities=12% Similarity=0.027 Sum_probs=70.6
Q ss_pred CCeEEEEeCCCCeEEEEEc--C-CC----ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC------
Q psy13635 187 ARNLYWTDTGTDRIEVCRL--E-GT----HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG------ 253 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~--~-g~----~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~------ 253 (357)
++.||..... .+++..+ . +. ..+.+.......=..|++|+ +|.||-.+.. ++++|......
T Consensus 44 ~g~lY~I~~~--~lY~~~~~~~~~~~~~~~~~~Ig~g~W~~F~~i~~d~-~G~LYaV~~~---G~lyR~~~~~~~~~~W~ 117 (229)
T PF14517_consen 44 NGRLYAIRND--GLYRGSPSSSGGNTWDSGSKQIGDGGWNSFKFIFFDP-TGVLYAVTPD---GKLYRHPRPTNGSDNWI 117 (229)
T ss_dssp TS-EEEEETT--EEEEES---STT--HHHH-EEEE-S-GGG-SEEEE-T-TS-EEEEETT----EEEEES---STT--HH
T ss_pred CceEEEEECC--ceEEecCCccCcccccccCcccccCcccceeEEEecC-CccEEEeccc---cceeeccCCCccCcchh
Confidence 5577766643 5555521 1 11 12344433244556899997 5999988765 57877775432
Q ss_pred --ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEE-eCCCCC-----e-EEEecCCCCceEEEEEE-CCEEEEEe
Q psy13635 254 --ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMI-DFDGNN-----R-RELINENLPHVFGISLL-GDYVYWTD 323 (357)
Q Consensus 254 --~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~-~~dG~~-----~-~~i~~~~~~~p~gia~~-~~~ly~td 323 (357)
..+.+...+.+....|-.+ .++.||..+... ++++. .+++.. . ..+.......+.-|... +|.||+.+
T Consensus 118 ~~~~~~iG~~GW~~f~~vfa~-~~GvLY~i~~dg-~~~~~~~p~~~~~~W~~~s~~v~~~gw~~~~~i~~~~~g~L~~V~ 195 (229)
T PF14517_consen 118 GGSGKKIGGTGWNDFDAVFAG-PNGVLYAITPDG-RLYRRYRPDGGSDRWLSGSGLVGGGGWDSFHFIFFSPDGNLWAVK 195 (229)
T ss_dssp H-HSEEEE-SSGGGEEEEEE--TTS-EEEEETTE--EEEE---SSTT--HHHH-EEEESSSGGGEEEEEE-TTS-EEEE-
T ss_pred hccceecccCCCccceEEEeC-CCccEEEEcCCC-ceEEeCCCCCCCCccccccceeccCCcccceEEeeCCCCcEEEEe
Confidence 2234435566667778887 689999998654 56665 554432 2 22333344456666666 57888884
Q ss_pred CCCCeEEEEeC
Q psy13635 324 WQRRSIDRVNK 334 (357)
Q Consensus 324 ~~~~~I~~~~~ 334 (357)
.++.++|-..
T Consensus 196 -~~G~lyr~~~ 205 (229)
T PF14517_consen 196 -SNGKLYRGRP 205 (229)
T ss_dssp -ETTEEEEES-
T ss_pred -cCCEEeccCC
Confidence 4478876553
No 291
>KOG0306|consensus
Probab=24.46 E-value=8.3e+02 Score=25.55 Aligned_cols=224 Identities=13% Similarity=0.077 Sum_probs=119.7
Q ss_pred eEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEE------EEcCCCCcceeEEEEe-
Q psy13635 42 QMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISC------CTFDGNNVGSKHNVIT- 113 (357)
Q Consensus 42 ~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~------~~~~g~~~~~~~~~~~- 113 (357)
.+++... ..++..+|+....-.+.+.+.-+..+.++..|+ ++=+++-..+..|.- .+..|+. ..++.
T Consensus 425 ~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD-~~g~vT~saDktVkfWdf~l~~~~~gt~----~k~lsl 499 (888)
T KOG0306|consen 425 RYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPD-NKGFVTGSADKTVKFWDFKLVVSVPGTQ----KKVLSL 499 (888)
T ss_pred ceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCC-CCceEEecCCcEEEEEeEEEEeccCccc----ceeeee
Confidence 3344443 456888898765444455555667788888774 445555555554432 1222331 11110
Q ss_pred ------CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 114 ------NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 114 ------~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
.--...-.+++.|. +++....--++++.++-+|.-.- -.+....+ | ...+-+.+
T Consensus 500 ~~~rtLel~ddvL~v~~Spd-gk~LaVsLLdnTVkVyflDtlKFflsLYGHkL-----------P------V~smDIS~- 560 (888)
T KOG0306|consen 500 KHTRTLELEDDVLCVSVSPD-GKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKL-----------P------VLSMDISP- 560 (888)
T ss_pred ccceEEeccccEEEEEEcCC-CcEEEEEeccCeEEEEEecceeeeeeeccccc-----------c------eeEEeccC-
Confidence 00123445666653 33434444456666665554321 11111110 1 12233332
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCce-EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCC
Q psy13635 187 ARNLYWTDTGTDRIEVCRLEGTHR-KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGW 265 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~g~~~-~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~ 265 (357)
..++.+|......|-.-.+|-..+ +.+.. .-.....+.+-| ..++||+.... +.|.+.+-+--.....+......
T Consensus 561 DSklivTgSADKnVKiWGLdFGDCHKS~fA-HdDSvm~V~F~P-~~~~FFt~gKD--~kvKqWDg~kFe~iq~L~~H~~e 636 (888)
T KOG0306|consen 561 DSKLIVTGSADKNVKIWGLDFGDCHKSFFA-HDDSVMSVQFLP-KTHLFFTCGKD--GKVKQWDGEKFEEIQKLDGHHSE 636 (888)
T ss_pred CcCeEEeccCCCceEEeccccchhhhhhhc-ccCceeEEEEcc-cceeEEEecCc--ceEEeechhhhhhheeeccchhe
Confidence 347777877766666666663333 33332 234567888888 48899998774 47766654443333444455667
Q ss_pred ceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 266 PNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 266 P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
...+++- .+|...++.+..+.|.....+
T Consensus 637 v~cLav~-~~G~~vvs~shD~sIRlwE~t 664 (888)
T KOG0306|consen 637 VWCLAVS-PNGSFVVSSSHDKSIRLWERT 664 (888)
T ss_pred eeeeEEc-CCCCeEEeccCCceeEeeecc
Confidence 7889997 456556666666677666543
No 292
>KOG0274|consensus
Probab=24.10 E-value=7.4e+02 Score=24.85 Aligned_cols=228 Identities=9% Similarity=0.029 Sum_probs=123.5
Q ss_pred EeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeee
Q psy13635 88 TDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIAS 167 (357)
Q Consensus 88 ~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~ 167 (357)
+......|...+..... ....-+........++++.. .+.++++-+...++.+.+.........+..
T Consensus 223 ~~s~~~tl~~~~~~~~~--~i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~C~~~l~g---------- 289 (537)
T KOG0274|consen 223 SGSDDSTLHLWDLNNGY--LILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGECTHSLQG---------- 289 (537)
T ss_pred ecCCCceeEEeecccce--EEEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCcEEEEecC----------
Confidence 34444555444444331 11111344456788999985 677888888888999888765555444321
Q ss_pred eccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEE
Q psy13635 168 YKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIER 247 (357)
Q Consensus 168 ~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~ 247 (357)
..-.+..++ ..+.+.++......|.+-+........+..+.....+.+.++ +..++-.... +.|..
T Consensus 290 --------h~stv~~~~-~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d---~~v~V 355 (537)
T KOG0274|consen 290 --------HTSSVRCLT-IDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYD---GTVKV 355 (537)
T ss_pred --------CCceEEEEE-ccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecC---ceEEE
Confidence 122233334 455555565556677777766433333333344566777777 4566655554 34554
Q ss_pred EecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC-CeEEEecCCCCceEEEEEECCEEEEEeCCC
Q psy13635 248 SLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN-NRRELINENLPHVFGISLLGDYVYWTDWQR 326 (357)
Q Consensus 248 ~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~-~~~~i~~~~~~~p~gia~~~~~ly~td~~~ 326 (357)
-+..-..-...+.....+..+++++. +.++|=.. ....|..-|+++. .....+.....-..++.. .+..+++....
T Consensus 356 W~~~~~~cl~sl~gH~~~V~sl~~~~-~~~~~Sgs-~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~-~~~~Lvs~~aD 432 (537)
T KOG0274|consen 356 WDPRTGKCLKSLSGHTGRVYSLIVDS-ENRLLSGS-LDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL-RDNFLVSSSAD 432 (537)
T ss_pred EEhhhceeeeeecCCcceEEEEEecC-cceEEeee-eccceEeecCCchhhhhhhhcCCccccccccc-ccceeEecccc
Confidence 44442222223333445667888863 25555443 3467888888776 332222211111122222 24555655566
Q ss_pred CeEEEEeCccCceeEEEec
Q psy13635 327 RSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 327 ~~I~~~~~~~g~~~~~i~~ 345 (357)
+.|..=+..+++.++++-.
T Consensus 433 ~~Ik~WD~~~~~~~~~~~~ 451 (537)
T KOG0274|consen 433 GTIKLWDAEEGECLRTLEG 451 (537)
T ss_pred ccEEEeecccCceeeeecc
Confidence 6776666667777776655
No 293
>KOG2111|consensus
Probab=23.35 E-value=6e+02 Score=23.51 Aligned_cols=114 Identities=13% Similarity=0.144 Sum_probs=67.4
Q ss_pred CCceE-EEeCCCCeEEEEeCC--CCeEEEEEcCCCce--EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEE-Eec
Q psy13635 177 HPDGV-AVDWVARNLYWTDTG--TDRIEVCRLEGTHR--KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIER-SLL 250 (357)
Q Consensus 177 ~p~gl-avD~~~~~lY~td~~--~~~I~~~~~~g~~~--~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~-~~~ 250 (357)
.|.|+ ++++..++-+.+-.+ .+.|+..++..... ..++........-+++..+ |.+.-|-... +.+-| .+.
T Consensus 135 NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~-Gt~vATaStk--GTLIRIFdt 211 (346)
T KOG2111|consen 135 NPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQ-GTLVATASTK--GTLIRIFDT 211 (346)
T ss_pred CCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCC-ccEEEEeccC--cEEEEEEEc
Confidence 56665 446666666666554 35899988876554 2444445566778888864 6665554442 44444 443
Q ss_pred -CCCceEEEeeCCCC--CceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 251 -NGGERVLLVKDRLG--WPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 251 -dg~~~~~~~~~~l~--~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
+|+...++- .+.. .-..|++.+....|-+ .+..+.++.+.+..
T Consensus 212 ~~g~~l~E~R-RG~d~A~iy~iaFSp~~s~Lav-sSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 212 EDGTLLQELR-RGVDRADIYCIAFSPNSSWLAV-SSDKGTLHIFSLRD 257 (346)
T ss_pred CCCcEeeeee-cCCchheEEEEEeCCCccEEEE-EcCCCeEEEEEeec
Confidence 444444443 3332 3468899865555544 34667888887654
No 294
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=23.09 E-value=5.7e+02 Score=23.19 Aligned_cols=61 Identities=8% Similarity=-0.081 Sum_probs=35.7
Q ss_pred eEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCC-eEEEEEcCC
Q psy13635 42 QMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTE-MISCCTFDG 102 (357)
Q Consensus 42 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~-~I~~~~~~g 102 (357)
..++.+..+.|...++...........--.......+...++.|+++|...+ .+.+++.++
T Consensus 99 ~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~ 160 (321)
T PF03178_consen 99 GRLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEEN 160 (321)
T ss_dssp TEEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTT
T ss_pred CEEEEeecCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEccC
Confidence 4488888888888888764313332221112234444555789999998765 344555533
No 295
>KOG0271|consensus
Probab=22.76 E-value=6.7e+02 Score=23.90 Aligned_cols=104 Identities=8% Similarity=-0.081 Sum_probs=60.5
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC-
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL- 127 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~- 127 (357)
+..++.-|++.+......-..-.-...+++.|+ ++..-+...++.|.-.+..... +....+...-+...+||..|.
T Consensus 136 D~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPD-gk~iASG~~dg~I~lwdpktg~--~~g~~l~gH~K~It~Lawep~h 212 (480)
T KOG0271|consen 136 DTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPD-GKKIASGSKDGSIRLWDPKTGQ--QIGRALRGHKKWITALAWEPLH 212 (480)
T ss_pred CceEEeeccCCCCcceeecCCccEEEEEEECCC-cchhhccccCCeEEEecCCCCC--cccccccCcccceeEEeecccc
Confidence 345777888774333333334445678888884 5555666777888887766543 122233333345566666432
Q ss_pred ---CCeEEEEeCCCCEEEEEEcCCCceEEEE
Q psy13635 128 ---TEKLYWTDSETNKLEVSSLDGKKRKVLY 155 (357)
Q Consensus 128 ---~~~ly~td~~~~~I~~~~~~g~~~~~~~ 155 (357)
....+.+.+..+.|...+..+.......
T Consensus 213 l~p~~r~las~skDg~vrIWd~~~~~~~~~l 243 (480)
T KOG0271|consen 213 LVPPCRRLASSSKDGSVRIWDTKLGTCVRTL 243 (480)
T ss_pred cCCCccceecccCCCCEEEEEccCceEEEEe
Confidence 2235555666788888887776554443
No 296
>PF07009 DUF1312: Protein of unknown function (DUF1312); InterPro: IPR010739 This family consists of several bacterial proteins of around 120 residues in length. The function of this family is unknown.; PDB: 4ESN_B 1NPP_B 1M1G_D 1NPR_A 1M1H_A 2KPP_A 3LD7_C.
Probab=22.63 E-value=3.5e+02 Score=20.54 Aligned_cols=53 Identities=8% Similarity=0.044 Sum_probs=26.3
Q ss_pred ecCCCCeEEEEEeCC-cEEEEEcCC-CCcceEeccCCCcEEEEEEEccCCEEEEEeC
Q psy13635 36 SHHVAAQMLLFATSK-DIRIANLSR-PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH 90 (357)
Q Consensus 36 ~~~~~~~~l~~~~~~-~i~~~~~~~-~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~ 90 (357)
...+...++.+...+ .+.+++++. ....+..++......-+.+. ++++++.+.
T Consensus 21 ~~~~~~~~~~I~~~g~~~~~i~L~~~~~~~~i~i~~~~g~~~i~i~--~g~vrv~~s 75 (113)
T PF07009_consen 21 GNNSGGKYAVIYVDGKEVKRIPLDKVNEDKTIEIDGDGGYNTIEIK--DGKVRVIES 75 (113)
T ss_dssp ----SEEEEEEEETTEEEEEEETTS-BSEEEEEEETTTCEEEEEEE--TTEEEEEEE
T ss_pred ccCCCCeEEEEEECCEEEEEEECCCCCCCEEEEEecCCcEEEEEEE--CCEEEEEEC
Confidence 344445555555544 466899987 33444444444444545444 455555543
No 297
>PF14339 DUF4394: Domain of unknown function (DUF4394)
Probab=22.02 E-value=5.5e+02 Score=22.62 Aligned_cols=161 Identities=15% Similarity=0.073 Sum_probs=89.9
Q ss_pred CCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCC-----CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 177 HPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTD-----LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 177 ~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~-----~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
.--||.+-|.+|.||-. ...++|+.+++.......+.... ...+.++.++|.-.+|.+.... ++=.|.+.+
T Consensus 28 ~l~GID~Rpa~G~LYgl-~~~g~lYtIn~~tG~aT~vg~s~~~~al~g~~~gvDFNP~aDRlRvvs~~---GqNlR~npd 103 (236)
T PF14339_consen 28 SLVGIDFRPANGQLYGL-GSTGRLYTINPATGAATPVGASPLTVALSGTAFGVDFNPAADRLRVVSNT---GQNLRLNPD 103 (236)
T ss_pred eEEEEEeecCCCCEEEE-eCCCcEEEEECCCCeEEEeecccccccccCceEEEecCcccCcEEEEccC---CcEEEECCC
Confidence 34577888899999966 44579999998765544442111 1237889999999999988554 355677776
Q ss_pred CCceEEEeeCCC----------CCce--EEEEecC------CCEEEEEeCCCCeEEEEeC-CCCCeEEEecC--CCCceE
Q psy13635 252 GGERVLLVKDRL----------GWPN--GITLDVD------NEKLYWCDAKTDKIEMIDF-DGNNRRELINE--NLPHVF 310 (357)
Q Consensus 252 g~~~~~~~~~~l----------~~P~--giaid~~------~~~lY~~d~~~~~I~~~~~-dG~~~~~i~~~--~~~~p~ 310 (357)
..... .....+ ..|. +.|.... .-.||-.|...+.+....+ +-.....+..- ....-.
T Consensus 104 tGav~-~~Dg~L~y~~gd~~~G~~p~v~aaAYTNs~~g~~t~TtLy~ID~~~~~Lv~Q~ppN~GtL~~vG~LGvd~~~~~ 182 (236)
T PF14339_consen 104 TGAVT-IVDGNLAYAAGDMNAGTTPGVTAAAYTNSFAGATTSTTLYDIDTTLDALVTQNPPNDGTLNTVGPLGVDAAGDA 182 (236)
T ss_pred CCCce-eccCccccCCCccccCCCCceEEEEEecccCCCccceEEEEEecCCCeEEEecCCCCCcEEeeeccccccCccc
Confidence 43311 111111 1332 2332211 3468888888887777743 22222222211 122233
Q ss_pred EEEEEC----C-EEEEEeC-CCCeEEEEeCccCceeEE
Q psy13635 311 GISLLG----D-YVYWTDW-QRRSIDRVNKITGNDREV 342 (357)
Q Consensus 311 gia~~~----~-~ly~td~-~~~~I~~~~~~~g~~~~~ 342 (357)
|+.+.. + .-|-+-. ....+|++++.+|+-..+
T Consensus 183 gFDI~~~~~~~~~a~a~~~~~~~~LY~vdL~TG~at~~ 220 (236)
T PF14339_consen 183 GFDIAGDGNGGNAAYAVLGVGGSGLYTVDLTTGAATLV 220 (236)
T ss_pred ceeeecCCCcceEEEEEecCCCcEEEEEECCCcccEEe
Confidence 444442 2 2333321 225788888877775543
No 298
>KOG0301|consensus
Probab=21.73 E-value=9e+02 Score=24.95 Aligned_cols=87 Identities=17% Similarity=0.223 Sum_probs=54.5
Q ss_pred CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeE
Q psy13635 263 LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 263 l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
.....|+++= ++.. |.+-...+.|..-+++|.-..+.. +.-.+-+.++.. ++.+.++-...++++-.++ ++..+
T Consensus 179 tD~VRgL~vl-~~~~-flScsNDg~Ir~w~~~ge~l~~~~-ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~--~e~~q 253 (745)
T KOG0301|consen 179 TDCVRGLAVL-DDSH-FLSCSNDGSIRLWDLDGEVLLEMH-GHTNFVYSISMALSDGLIVSTGEDRTLRIWKK--DECVQ 253 (745)
T ss_pred hhheeeeEEe-cCCC-eEeecCCceEEEEeccCceeeeee-ccceEEEEEEecCCCCeEEEecCCceEEEeec--CceEE
Confidence 3456788884 3322 344455778888899887765543 355667778744 6777888777777655554 46666
Q ss_pred EEecccCCceeee
Q psy13635 342 VIIERSCTGVTRR 354 (357)
Q Consensus 342 ~i~~~l~~p~~i~ 354 (357)
.|..+-...++.+
T Consensus 254 ~I~lPttsiWsa~ 266 (745)
T KOG0301|consen 254 VITLPTTSIWSAK 266 (745)
T ss_pred EEecCccceEEEE
Confidence 6665554444443
No 299
>KOG0301|consensus
Probab=21.70 E-value=9e+02 Score=24.94 Aligned_cols=76 Identities=14% Similarity=0.044 Sum_probs=50.6
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
...+++..-+.+ .|++...+..|+-..- |.. ..++.....-.+|+++=+.+ =|.+..+.+.|...+++|..
T Consensus 141 asVWAv~~l~e~--~~vTgsaDKtIklWk~-~~~----l~tf~gHtD~VRgL~vl~~~--~flScsNDg~Ir~w~~~ge~ 211 (745)
T KOG0301|consen 141 ASVWAVASLPEN--TYVTGSADKTIKLWKG-GTL----LKTFSGHTDCVRGLAVLDDS--HFLSCSNDGSIRLWDLDGEV 211 (745)
T ss_pred hheeeeeecCCC--cEEeccCcceeeeccC-Cch----hhhhccchhheeeeEEecCC--CeEeecCCceEEEEeccCce
Confidence 356677776533 8899888877776554 332 33333345568999986433 35567778999999998887
Q ss_pred eEEEE
Q psy13635 151 RKVLY 155 (357)
Q Consensus 151 ~~~~~ 155 (357)
.....
T Consensus 212 l~~~~ 216 (745)
T KOG0301|consen 212 LLEMH 216 (745)
T ss_pred eeeee
Confidence 65543
No 300
>KOG2321|consensus
Probab=21.60 E-value=8.5e+02 Score=24.62 Aligned_cols=90 Identities=17% Similarity=0.188 Sum_probs=56.9
Q ss_pred eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEE
Q psy13635 199 RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKL 278 (357)
Q Consensus 199 ~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~l 278 (357)
.|.-...-|..-.+-+. ..-+.++.+..+.-||.+-.+ ..|+|.+++-+.-..-+......-+.+.+. ....|
T Consensus 117 ~IefHak~G~hy~~RIP---~~GRDm~y~~~scDly~~gsg---~evYRlNLEqGrfL~P~~~~~~~lN~v~in-~~hgL 189 (703)
T KOG2321|consen 117 TIEFHAKYGRHYRTRIP---KFGRDMKYHKPSCDLYLVGSG---SEVYRLNLEQGRFLNPFETDSGELNVVSIN-EEHGL 189 (703)
T ss_pred eeeehhhcCeeeeeecC---cCCccccccCCCccEEEeecC---cceEEEEccccccccccccccccceeeeec-Cccce
Confidence 45555555554444332 234678888888899999888 589999998654433333444455677776 34445
Q ss_pred EEEeCCCCeEEEEeCCC
Q psy13635 279 YWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 279 Y~~d~~~~~I~~~~~dG 295 (357)
..+-...+.|...|+..
T Consensus 190 la~Gt~~g~VEfwDpR~ 206 (703)
T KOG2321|consen 190 LACGTEDGVVEFWDPRD 206 (703)
T ss_pred EEecccCceEEEecchh
Confidence 55555567777777644
No 301
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=21.46 E-value=4.2e+02 Score=25.96 Aligned_cols=67 Identities=16% Similarity=0.294 Sum_probs=39.9
Q ss_pred CCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE
Q psy13635 186 VARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL 257 (357)
Q Consensus 186 ~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~ 257 (357)
.+.+-|.+-..++....+.... .+..+...-.+.|.-++++|...+|..-|.+ +|.++.++......
T Consensus 326 ~~rkgF~~l~~~G~L~~f~st~-~~~lL~~~~~~~~~~~~~Sp~~~~Ll~e~~g----ki~~~~l~Nr~Pei 392 (733)
T COG4590 326 TNRKGFYSLYRNGTLQSFYSTS-EKLLLFERAYQAPQLVAMSPNQAYLLSEDQG----KIRLAQLENRNPEI 392 (733)
T ss_pred cccceEEEEcCCCceeeeeccc-CcceehhhhhcCcceeeeCcccchheeecCC----ceEEEEecCCCCCc
Confidence 4555555555555555543222 2223333334578889999877677666544 88888887665543
No 302
>KOG0288|consensus
Probab=21.44 E-value=7.3e+02 Score=23.83 Aligned_cols=132 Identities=7% Similarity=-0.015 Sum_probs=75.1
Q ss_pred CeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC
Q psy13635 129 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT 208 (357)
Q Consensus 129 ~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~ 208 (357)
...++++...++|...+..+.....-++.+ .....+.+...+..|..+ ...+.+-.+++.+.
T Consensus 312 ~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g-----------------g~vtSl~ls~~g~~lLss-sRDdtl~viDlRt~ 373 (459)
T KOG0288|consen 312 ISDVISGHFDKKVRFWDIRSADKTRSVPLG-----------------GRVTSLDLSMDGLELLSS-SRDDTLKVIDLRTK 373 (459)
T ss_pred ceeeeecccccceEEEeccCCceeeEeecC-----------------cceeeEeeccCCeEEeee-cCCCceeeeecccc
Confidence 456666666677777776555443332211 134445555444455544 55678888888877
Q ss_pred ceEEEecC-CC---CCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCC--ceEEEEecCCCEEEEE
Q psy13635 209 HRKVLVNT-DL---VEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGW--PNGITLDVDNEKLYWC 281 (357)
Q Consensus 209 ~~~~~~~~-~~---~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~--P~giaid~~~~~lY~~ 281 (357)
........ +. ..-..+.++|. .=|++..+. +++|+.-+..++.....+...-.. .+.++.++.+..|.-+
T Consensus 374 eI~~~~sA~g~k~asDwtrvvfSpd--~~YvaAGS~-dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsa 449 (459)
T KOG0288|consen 374 EIRQTFSAEGFKCASDWTRVVFSPD--GSYVAAGSA-DGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSA 449 (459)
T ss_pred cEEEEeeccccccccccceeEECCC--CceeeeccC-CCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcc
Confidence 66554432 11 12345667764 345554444 378999998888888777654444 3455555544444333
No 303
>KOG1034|consensus
Probab=21.13 E-value=6.8e+02 Score=23.34 Aligned_cols=104 Identities=9% Similarity=0.069 Sum_probs=67.2
Q ss_pred CCeEEEEEeCCc-EEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc--
Q psy13635 40 AAQMLLFATSKD-IRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-- 116 (357)
Q Consensus 40 ~~~~l~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-- 116 (357)
..|++..+.... |+++|+....-.............|-+.|..-.|..+-..+..|+--++.... -..+..|+
T Consensus 104 ~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~----Cv~VfGG~eg 179 (385)
T KOG1034|consen 104 GNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDV----CVAVFGGVEG 179 (385)
T ss_pred CCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCe----EEEEeccccc
Confidence 578888877554 67899877544445556666777888888888888888888888887776653 22222333
Q ss_pred CCceeEEEEcCCCeEEEEeCC-CCEEEEEEcC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLD 147 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~-~~~I~~~~~~ 147 (357)
..-+=|.+|+...--|++..+ ..+|....++
T Consensus 180 HrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 180 HRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred ccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence 234446666655555666654 3455555554
No 304
>KOG1310|consensus
Probab=20.52 E-value=6.5e+02 Score=25.26 Aligned_cols=105 Identities=12% Similarity=0.142 Sum_probs=0.0
Q ss_pred CCCeEEEEEeCCcEEEEEcCCCCcceEecc----CCCcEEEEEEEc-cCCEEEEEeCCCCeEEEEEcCC---------CC
Q psy13635 39 VAAQMLLFATSKDIRIANLSRPLKPVTIIK----DLEEGAAIDYYY-KKSMVCWTDHGTEMISCCTFDG---------NN 104 (357)
Q Consensus 39 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~i~~d~-~~~~ly~~d~~~~~I~~~~~~g---------~~ 104 (357)
.....++.+...+.+.+-.+- ...+++.. ...++..+.|-| .+++|..+..++..|+..+++. -.
T Consensus 59 n~dG~lL~SGSDD~r~ivWd~-~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~ 137 (758)
T KOG1310|consen 59 NADGELLASGSDDTRLIVWDP-FEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGME 137 (758)
T ss_pred cCCCCEEeecCCcceEEeecc-hhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCcc
Q ss_pred cceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 105 VGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 105 ~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
+......-.+....-||.-+.+-+.||+.+..|.|...++
T Consensus 138 --~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDi 177 (758)
T KOG1310|consen 138 --ETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDI 177 (758)
T ss_pred --chhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecc
Done!