Query psy13635
Match_columns 357
No_of_seqs 292 out of 2129
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 16:20:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13635.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13635hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s94_A LRP-6, low-density lipo 100.0 3.4E-46 1.2E-50 372.1 44.4 314 38-355 6-569 (619)
2 4a0p_A LRP6, LRP-6, low-densit 100.0 1.4E-43 4.7E-48 353.6 47.2 318 30-355 123-568 (628)
3 3sov_A LRP-6, low-density lipo 100.0 5.4E-42 1.8E-46 315.8 36.4 256 38-355 1-257 (318)
4 3p5b_L Low density lipoprotein 100.0 3.8E-40 1.3E-44 313.0 39.5 256 39-355 81-339 (400)
5 3v64_C Agrin; beta propeller, 100.0 7.1E-40 2.4E-44 305.7 38.6 251 82-355 44-294 (349)
6 3v64_C Agrin; beta propeller, 100.0 2.5E-39 8.6E-44 302.0 39.0 257 34-316 38-296 (349)
7 1ijq_A LDL receptor, low-densi 100.0 4.9E-39 1.7E-43 296.1 39.8 254 41-355 1-257 (316)
8 4a0p_A LRP6, LRP-6, low-densit 100.0 1.4E-39 4.8E-44 324.7 39.0 253 38-355 3-256 (628)
9 3v65_B Low-density lipoprotein 100.0 2.5E-39 8.5E-44 306.1 37.4 251 82-355 87-337 (386)
10 3m0c_C LDL receptor, low-densi 100.0 1.7E-38 5.7E-43 323.0 39.9 256 39-355 393-651 (791)
11 3v65_B Low-density lipoprotein 100.0 2.3E-38 7.7E-43 299.5 38.0 252 40-316 86-339 (386)
12 3s94_A LRP-6, low-density lipo 100.0 2.7E-37 9.2E-42 308.0 38.9 253 39-315 315-570 (619)
13 1npe_A Nidogen, entactin; glyc 100.0 7.6E-34 2.6E-38 254.7 35.4 254 83-355 2-258 (267)
14 1npe_A Nidogen, entactin; glyc 100.0 1.5E-32 5.2E-37 246.2 36.2 252 41-316 1-260 (267)
15 1n7d_A LDL receptor, low-densi 100.0 7.8E-35 2.7E-39 294.4 17.3 250 83-355 378-633 (699)
16 1n7d_A LDL receptor, low-densi 100.0 2.4E-34 8.1E-39 290.8 14.4 256 39-316 375-635 (699)
17 3sov_A LRP-6, low-density lipo 100.0 3.3E-27 1.1E-31 217.1 34.5 225 32-280 37-266 (318)
18 3p5b_L Low density lipoprotein 100.0 4.7E-27 1.6E-31 222.9 34.3 244 13-280 85-348 (400)
19 3m0c_C LDL receptor, low-densi 100.0 3.1E-27 1.1E-31 240.3 32.8 246 13-282 397-662 (791)
20 1ijq_A LDL receptor, low-densi 100.0 1.6E-26 5.5E-31 212.5 33.0 219 32-274 32-260 (316)
21 3s25_A Hypothetical 7-bladed b 100.0 3.5E-25 1.2E-29 201.6 31.6 258 40-345 24-301 (302)
22 4hw6_A Hypothetical protein, I 99.9 1.6E-25 5.6E-30 214.2 29.9 240 69-334 137-431 (433)
23 3tc9_A Hypothetical hydrolase; 99.9 2.9E-25 9.8E-30 212.5 30.9 240 69-334 135-428 (430)
24 3hrp_A Uncharacterized protein 99.9 7E-24 2.4E-28 201.7 34.6 242 69-334 129-408 (409)
25 3kya_A Putative phosphatase; s 99.9 8.1E-23 2.8E-27 196.2 31.8 243 69-334 137-473 (496)
26 1rwi_B Serine/threonine-protei 99.9 2.4E-23 8.4E-28 185.4 25.3 240 72-338 25-266 (270)
27 3fvz_A Peptidyl-glycine alpha- 99.9 8.3E-23 2.8E-27 188.4 28.0 253 67-334 20-320 (329)
28 3tc9_A Hypothetical hydrolase; 99.9 3E-22 1E-26 191.5 30.8 241 33-294 140-429 (430)
29 4hw6_A Hypothetical protein, I 99.9 9.6E-22 3.3E-26 188.1 30.7 239 33-294 142-432 (433)
30 2qc5_A Streptogramin B lactona 99.9 5.4E-21 1.9E-25 172.2 33.8 258 69-354 18-278 (300)
31 2qc5_A Streptogramin B lactona 99.9 7.1E-21 2.4E-25 171.4 34.4 272 32-334 22-298 (300)
32 3s25_A Hypothetical 7-bladed b 99.9 5.4E-22 1.8E-26 180.6 26.7 210 49-302 87-300 (302)
33 3hrp_A Uncharacterized protein 99.9 4.5E-21 1.5E-25 182.3 33.3 241 32-294 133-409 (409)
34 2z2n_A Virginiamycin B lyase; 99.9 3.5E-20 1.2E-24 166.7 35.5 276 32-337 17-296 (299)
35 1q7f_A NHL, brain tumor CG1071 99.9 1.5E-20 5E-25 169.1 32.8 240 68-334 27-278 (286)
36 2fp8_A Strictosidine synthase; 99.9 1.9E-21 6.4E-26 178.7 25.2 244 69-335 17-312 (322)
37 2z2n_A Virginiamycin B lyase; 99.9 7.9E-20 2.7E-24 164.4 34.4 258 69-354 13-273 (299)
38 3fvz_A Peptidyl-glycine alpha- 99.9 1.4E-19 4.6E-24 166.8 33.6 234 51-297 70-324 (329)
39 3kya_A Putative phosphatase; s 99.9 6E-20 2.1E-24 176.3 32.2 247 32-298 141-478 (496)
40 1q7f_A NHL, brain tumor CG1071 99.9 2.5E-19 8.6E-24 161.0 28.9 225 114-355 27-258 (286)
41 3dsm_A Uncharacterized protein 99.9 3.4E-18 1.2E-22 157.5 35.7 278 50-355 17-319 (328)
42 1rwi_B Serine/threonine-protei 99.9 6.4E-20 2.2E-24 163.2 23.3 239 31-297 25-266 (270)
43 2p4o_A Hypothetical protein; p 99.8 7E-19 2.4E-23 160.5 27.6 226 71-326 32-279 (306)
44 3dr2_A Exported gluconolactona 99.8 3.3E-18 1.1E-22 155.7 30.3 245 61-334 35-304 (305)
45 3e5z_A Putative gluconolactona 99.8 1.2E-17 4E-22 151.1 33.4 246 61-339 18-289 (296)
46 3a9g_A Putative uncharacterize 99.8 3.4E-18 1.2E-22 159.3 28.5 253 62-334 20-350 (354)
47 2ism_A Putative oxidoreductase 99.8 2.8E-18 9.6E-23 159.8 26.3 241 62-326 22-335 (352)
48 3vgz_A Uncharacterized protein 99.8 3.3E-16 1.1E-20 144.0 38.7 266 72-355 42-321 (353)
49 3g4e_A Regucalcin; six bladed 99.8 7.3E-17 2.5E-21 146.3 32.3 232 68-326 10-263 (297)
50 3dsm_A Uncharacterized protein 99.8 3.7E-17 1.3E-21 150.6 30.7 240 44-315 56-320 (328)
51 2fp8_A Strictosidine synthase; 99.8 4.8E-18 1.6E-22 155.9 24.5 225 112-346 14-278 (322)
52 3g4e_A Regucalcin; six bladed 99.8 2E-17 6.9E-22 150.0 27.0 223 109-355 5-248 (297)
53 2p4o_A Hypothetical protein; p 99.8 6.1E-18 2.1E-22 154.2 23.1 211 117-355 32-262 (306)
54 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 8.4E-17 2.9E-21 146.0 27.4 248 62-335 9-298 (314)
55 3vgz_A Uncharacterized protein 99.8 4.7E-15 1.6E-19 136.2 39.3 263 37-325 48-334 (353)
56 2qe8_A Uncharacterized protein 99.8 5.4E-17 1.8E-21 150.3 25.6 235 71-330 17-315 (343)
57 2ism_A Putative oxidoreductase 99.8 7.7E-17 2.6E-21 150.0 24.5 231 109-355 23-322 (352)
58 2g8s_A Glucose/sorbosone dehyd 99.8 1.5E-16 5.2E-21 148.0 25.1 258 61-334 8-352 (353)
59 3e5z_A Putative gluconolactona 99.8 4.5E-16 1.5E-20 140.6 26.8 218 109-354 20-262 (296)
60 3dr2_A Exported gluconolactona 99.8 2.6E-16 8.8E-21 143.2 25.0 213 109-346 37-276 (305)
61 3u4y_A Uncharacterized protein 99.8 1.1E-14 3.7E-19 132.9 35.3 289 41-356 9-322 (331)
62 1l0q_A Surface layer protein; 99.7 1.6E-13 5.6E-18 128.0 40.7 278 42-346 2-285 (391)
63 3das_A Putative oxidoreductase 99.7 8.3E-15 2.8E-19 134.9 30.7 244 62-325 23-327 (347)
64 3a9g_A Putative uncharacterize 99.7 2.5E-15 8.4E-20 139.9 26.9 230 109-354 21-318 (354)
65 3hfq_A Uncharacterized protein 99.7 3.4E-14 1.2E-18 130.9 34.3 278 67-356 36-340 (347)
66 2dg1_A DRP35, lactonase; beta 99.7 1.6E-14 5.4E-19 132.3 31.2 248 63-334 37-314 (333)
67 1ri6_A Putative isomerase YBHE 99.7 1.5E-13 5E-18 125.4 36.8 295 42-355 5-330 (343)
68 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 8.8E-15 3E-19 132.6 24.8 228 109-354 10-274 (314)
69 2ghs_A AGR_C_1268P; regucalcin 99.7 1.4E-13 4.8E-18 126.4 31.8 230 69-326 47-293 (326)
70 3scy_A Hypothetical bacterial 99.7 9.3E-13 3.2E-17 121.9 36.5 275 69-356 48-360 (361)
71 3u4y_A Uncharacterized protein 99.7 2.4E-13 8E-18 124.0 32.0 235 78-339 5-255 (331)
72 2qe8_A Uncharacterized protein 99.7 1.6E-14 5.4E-19 133.7 23.9 222 117-355 17-298 (343)
73 2dg1_A DRP35, lactonase; beta 99.7 8.7E-14 3E-18 127.3 28.6 217 109-346 37-272 (333)
74 3qqz_A Putative uncharacterize 99.7 1.8E-13 6.3E-18 120.6 28.6 200 117-335 27-252 (255)
75 3qqz_A Putative uncharacterize 99.6 1.1E-12 3.7E-17 115.7 31.4 211 70-296 26-254 (255)
76 2g8s_A Glucose/sorbosone dehyd 99.6 2.9E-14 9.9E-19 132.6 22.4 233 109-354 10-329 (353)
77 3c75_H MADH, methylamine dehyd 99.6 1.4E-13 4.7E-18 130.5 26.9 285 41-353 84-419 (426)
78 2mad_H Methylamine dehydrogena 99.6 7.4E-12 2.5E-16 117.2 38.1 285 41-354 32-368 (373)
79 2ghs_A AGR_C_1268P; regucalcin 99.6 2.9E-13 9.8E-18 124.3 27.9 220 109-354 41-277 (326)
80 3hfq_A Uncharacterized protein 99.6 2.4E-12 8.3E-17 118.3 33.5 262 35-314 45-339 (347)
81 3das_A Putative oxidoreductase 99.6 4.4E-13 1.5E-17 123.4 27.2 233 108-354 23-314 (347)
82 1cru_A Protein (soluble quinop 99.6 1.5E-13 5.1E-18 131.9 24.4 253 61-331 17-431 (454)
83 1l0q_A Surface layer protein; 99.6 3.6E-11 1.2E-15 112.1 36.6 241 33-297 35-277 (391)
84 2iwa_A Glutamine cyclotransfer 99.6 5.8E-12 2E-16 111.6 29.0 197 71-295 21-237 (266)
85 1nir_A Nitrite reductase; hemo 99.6 7.1E-11 2.4E-15 116.0 38.7 300 33-354 182-533 (543)
86 1ri6_A Putative isomerase YBHE 99.6 1.6E-11 5.3E-16 111.8 31.8 263 34-315 42-331 (343)
87 2oiz_A Aromatic amine dehydrog 99.6 1.1E-11 3.7E-16 115.5 31.3 286 41-355 15-355 (361)
88 2p9w_A MAL S 1 allergenic prot 99.6 6.5E-13 2.2E-17 120.2 22.0 241 71-325 13-304 (334)
89 3bws_A Protein LP49; two-domai 99.5 6.8E-11 2.3E-15 111.7 36.2 274 34-334 127-430 (433)
90 3scy_A Hypothetical bacterial 99.5 1.7E-10 5.9E-15 106.5 36.1 260 35-314 55-359 (361)
91 3sjl_D Methylamine dehydrogena 99.5 1.7E-11 5.7E-16 114.4 28.9 288 36-352 39-378 (386)
92 1nir_A Nitrite reductase; hemo 99.5 1.2E-10 4.2E-15 114.3 35.3 288 41-343 148-466 (543)
93 3sre_A PON1, serum paraoxonase 99.5 1.3E-11 4.4E-16 114.0 26.4 206 66-293 44-296 (355)
94 1pby_B Quinohemoprotein amine 99.5 9.2E-11 3.2E-15 106.4 31.9 268 49-346 10-320 (337)
95 2p9w_A MAL S 1 allergenic prot 99.5 1.5E-11 5E-16 111.4 25.5 210 114-337 10-265 (334)
96 2iwa_A Glutamine cyclotransfer 99.5 4E-11 1.4E-15 106.2 27.9 195 117-336 21-237 (266)
97 3sre_A PON1, serum paraoxonase 99.5 3.5E-12 1.2E-16 117.8 20.6 202 116-334 49-296 (355)
98 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.1E-10 3.7E-15 108.5 29.8 265 69-354 38-359 (365)
99 1qks_A Cytochrome CD1 nitrite 99.5 3.5E-09 1.2E-13 104.2 41.7 303 32-353 199-556 (567)
100 3bws_A Protein LP49; two-domai 99.5 5.7E-10 2E-14 105.3 34.9 229 44-295 183-432 (433)
101 1mda_H Methylamine dehydrogena 99.4 8.6E-12 2.9E-16 116.2 20.4 277 42-354 32-363 (368)
102 1cru_A Protein (soluble quinop 99.4 2.3E-11 8E-16 116.6 22.9 165 109-286 19-249 (454)
103 3nok_A Glutaminyl cyclase; bet 99.4 1.1E-09 3.6E-14 96.2 28.8 192 71-293 55-264 (268)
104 2mad_H Methylamine dehydrogena 99.4 2.9E-09 9.9E-14 99.5 33.6 262 34-316 70-371 (373)
105 3nol_A Glutamine cyclotransfer 99.4 1.1E-09 3.7E-14 96.1 28.5 192 71-293 43-254 (262)
106 1jof_A Carboxy-CIS,CIS-muconat 99.4 3E-10 1E-14 105.5 26.7 251 34-298 44-344 (365)
107 3mbr_X Glutamine cyclotransfer 99.4 2.6E-09 9E-14 92.8 30.5 196 69-294 19-234 (243)
108 3no2_A Uncharacterized protein 99.3 1.4E-09 4.7E-14 97.3 27.3 234 82-345 4-261 (276)
109 1qks_A Cytochrome CD1 nitrite 99.3 1.3E-08 4.6E-13 100.1 36.5 283 41-337 166-478 (567)
110 1jmx_B Amine dehydrogenase; ox 99.3 5.8E-09 2E-13 95.0 29.9 246 75-346 4-335 (349)
111 2ece_A 462AA long hypothetical 99.3 1.1E-08 3.7E-13 96.4 29.8 241 80-337 93-428 (462)
112 2wg3_C Hedgehog-interacting pr 99.3 1.3E-09 4.6E-14 104.3 24.2 257 62-333 5-370 (463)
113 1pby_B Quinohemoprotein amine 99.2 1.5E-08 5E-13 91.7 28.8 245 85-354 3-286 (337)
114 2oiz_A Aromatic amine dehydrog 99.2 7.8E-09 2.7E-13 96.0 27.1 261 34-315 54-356 (361)
115 3mbr_X Glutamine cyclotransfer 99.2 7.1E-08 2.4E-12 83.8 30.5 193 114-334 18-233 (243)
116 3no2_A Uncharacterized protein 99.2 1.7E-08 5.7E-13 90.3 27.4 241 49-314 14-273 (276)
117 3nol_A Glutamine cyclotransfer 99.2 1.5E-08 5.1E-13 88.8 26.2 183 43-250 54-254 (262)
118 3c75_H MADH, methylamine dehyd 99.2 2.8E-09 9.6E-14 100.9 22.8 259 31-312 120-419 (426)
119 3nok_A Glutaminyl cyclase; bet 99.2 4.8E-09 1.6E-13 92.0 22.1 158 178-346 57-220 (268)
120 1jmx_B Amine dehydrogenase; ox 99.2 3.8E-08 1.3E-12 89.5 28.6 217 49-297 20-327 (349)
121 2hqs_A Protein TOLB; TOLB, PAL 99.2 1.7E-07 5.9E-12 88.5 32.9 227 50-301 159-393 (415)
122 3sjl_D Methylamine dehydrogena 99.1 1.5E-08 5.2E-13 94.4 24.0 260 35-315 83-382 (386)
123 1fwx_A Nitrous oxide reductase 99.1 1.6E-08 5.6E-13 98.3 24.2 245 41-300 101-436 (595)
124 2ece_A 462AA long hypothetical 99.1 4.3E-08 1.5E-12 92.3 23.8 223 39-282 93-399 (462)
125 1mda_H Methylamine dehydrogena 99.0 2.5E-09 8.4E-14 99.5 14.3 253 34-316 69-366 (368)
126 1fwx_A Nitrous oxide reductase 99.0 3.3E-08 1.1E-12 96.1 22.5 238 81-343 100-437 (595)
127 2hqs_A Protein TOLB; TOLB, PAL 99.0 8.1E-07 2.8E-11 83.9 31.3 235 93-353 159-403 (415)
128 2ojh_A Uncharacterized protein 99.0 1.7E-07 5.8E-12 82.5 25.0 226 50-302 22-265 (297)
129 2z3z_A Dipeptidyl aminopeptida 99.0 2.2E-07 7.6E-12 93.5 27.8 281 33-338 85-437 (706)
130 2ymu_A WD-40 repeat protein; u 99.0 1.1E-05 3.8E-10 78.6 38.3 284 38-354 271-556 (577)
131 2vdu_B TRNA (guanine-N(7)-)-me 98.9 1.9E-05 6.5E-10 74.9 37.7 246 72-339 104-396 (450)
132 3zwl_B Eukaryotic translation 98.9 2.5E-05 8.6E-10 70.9 37.2 285 37-335 40-345 (369)
133 3pe7_A Oligogalacturonate lyas 98.9 8E-07 2.8E-11 82.2 26.5 278 36-335 42-383 (388)
134 1gxr_A ESG1, transducin-like e 98.9 2.5E-05 8.4E-10 70.1 35.6 273 34-333 56-334 (337)
135 2wg3_C Hedgehog-interacting pr 98.9 2.2E-07 7.5E-12 88.9 22.6 217 109-335 6-311 (463)
136 2ymu_A WD-40 repeat protein; u 98.9 2.8E-05 9.5E-10 75.8 38.1 285 36-353 228-514 (577)
137 3azo_A Aminopeptidase; POP fam 98.9 1.8E-06 6.1E-11 86.1 29.5 238 80-340 88-373 (662)
138 2ecf_A Dipeptidyl peptidase IV 98.9 1.2E-06 4.1E-11 88.5 28.5 280 33-339 112-461 (741)
139 3q6k_A 43.2 kDa salivary prote 98.9 1.5E-06 5.1E-11 80.5 26.3 241 70-325 25-343 (381)
140 1gxr_A ESG1, transducin-like e 98.9 1.7E-05 6E-10 71.1 33.3 250 68-341 49-301 (337)
141 1r5m_A SIR4-interacting protei 98.9 2.1E-05 7.1E-10 72.9 33.8 291 34-338 50-363 (425)
142 4aez_A CDC20, WD repeat-contai 98.8 5.7E-05 1.9E-09 70.4 36.4 279 41-344 104-388 (401)
143 2ecf_A Dipeptidyl peptidase IV 98.8 7.8E-06 2.7E-10 82.5 32.2 293 34-342 41-420 (741)
144 3amr_A 3-phytase; beta-propell 98.8 9.5E-07 3.2E-11 80.6 22.3 188 43-253 41-264 (355)
145 1pgu_A Actin interacting prote 98.8 3.1E-05 1.1E-09 75.8 35.1 286 34-345 23-337 (615)
146 3c5m_A Oligogalacturonate lyas 98.8 1.1E-06 3.9E-11 81.2 23.3 282 36-343 42-390 (396)
147 3q6k_A 43.2 kDa salivary prote 98.8 6.2E-06 2.1E-10 76.4 27.6 208 69-285 85-344 (381)
148 3amr_A 3-phytase; beta-propell 98.8 1.7E-06 5.9E-11 78.9 23.1 195 83-296 41-264 (355)
149 3mkq_A Coatomer beta'-subunit; 98.8 6.5E-05 2.2E-09 76.3 37.4 258 33-315 17-279 (814)
150 2ojh_A Uncharacterized protein 98.8 1.7E-06 5.7E-11 76.1 22.2 228 32-283 44-291 (297)
151 3pe7_A Oligogalacturonate lyas 98.8 1.3E-05 4.3E-10 74.0 28.6 244 76-339 41-332 (388)
152 1sq9_A Antiviral protein SKI8; 98.8 0.00013 4.4E-09 67.3 35.4 283 42-337 27-396 (397)
153 2pm9_A Protein WEB1, protein t 98.7 4.3E-06 1.5E-10 77.7 24.4 276 49-338 44-339 (416)
154 3o4h_A Acylamino-acid-releasin 98.7 3.1E-06 1.1E-10 83.2 24.1 260 39-334 31-313 (582)
155 3ow8_A WD repeat-containing pr 98.7 0.00016 5.5E-09 65.3 35.6 263 69-354 31-297 (321)
156 1vyh_C Platelet-activating fac 98.7 0.00016 5.5E-09 67.7 34.0 273 35-332 114-407 (410)
157 2z3z_A Dipeptidyl aminopeptida 98.7 2.4E-05 8.1E-10 78.6 28.8 255 71-338 82-393 (706)
158 1r5m_A SIR4-interacting protei 98.6 0.00019 6.5E-09 66.3 32.6 236 33-297 112-363 (425)
159 2pm9_A Protein WEB1, protein t 98.6 8.6E-06 2.9E-10 75.7 23.0 247 38-296 76-338 (416)
160 3odt_A Protein DOA1; ubiquitin 98.6 0.00025 8.6E-09 62.7 32.6 269 43-341 31-301 (313)
161 4gqb_B Methylosome protein 50; 98.6 8.5E-05 2.9E-09 68.1 28.9 237 38-295 91-331 (344)
162 2ynn_A Coatomer subunit beta'; 98.6 0.00029 9.8E-09 63.0 34.7 257 34-315 18-279 (304)
163 3ow8_A WD repeat-containing pr 98.6 0.00035 1.2E-08 63.1 36.5 259 49-333 57-318 (321)
164 3mkq_A Coatomer beta'-subunit; 98.6 0.00063 2.1E-08 69.0 37.4 260 69-352 12-275 (814)
165 1k8k_C P40, ARP2/3 complex 41 98.6 0.00032 1.1E-08 63.7 31.7 238 35-295 14-274 (372)
166 2xyi_A Probable histone-bindin 98.6 4.7E-05 1.6E-09 71.8 26.6 255 67-334 125-408 (430)
167 3azo_A Aminopeptidase; POP fam 98.6 2.5E-05 8.5E-10 77.8 25.7 238 39-302 88-376 (662)
168 1erj_A Transcriptional repress 98.6 0.00052 1.8E-08 63.7 37.4 274 34-333 69-386 (393)
169 3o4h_A Acylamino-acid-releasin 98.5 6.1E-06 2.1E-10 81.1 20.5 233 72-333 23-273 (582)
170 2aq5_A Coronin-1A; WD40 repeat 98.5 0.00011 3.7E-09 68.4 27.8 249 49-316 56-323 (402)
171 2aq5_A Coronin-1A; WD40 repeat 98.5 0.00025 8.7E-09 65.8 30.1 244 75-339 39-302 (402)
172 3hxj_A Pyrrolo-quinoline quino 98.5 3.2E-05 1.1E-09 69.6 22.8 251 42-334 71-322 (330)
173 1xfd_A DIP, dipeptidyl aminope 98.5 4.8E-05 1.6E-09 76.5 26.3 286 43-334 30-393 (723)
174 1vyh_C Platelet-activating fac 98.5 0.00052 1.8E-08 64.2 31.9 253 69-346 107-379 (410)
175 2xyi_A Probable histone-bindin 98.5 6.9E-05 2.4E-09 70.6 25.9 241 36-295 135-410 (430)
176 4aez_A CDC20, WD repeat-contai 98.5 0.00073 2.5E-08 62.7 34.0 239 33-296 138-381 (401)
177 4a11_B DNA excision repair pro 98.5 0.00042 1.4E-08 63.7 30.8 282 35-341 49-370 (408)
178 1nr0_A Actin interacting prote 98.5 0.0014 4.9E-08 64.6 35.4 278 36-338 25-315 (611)
179 4g56_B MGC81050 protein; prote 98.5 5.7E-05 1.9E-09 69.5 23.4 237 38-295 103-343 (357)
180 2vdu_B TRNA (guanine-N(7)-)-me 98.5 0.00083 2.8E-08 63.5 32.2 196 118-334 104-337 (450)
181 1yfq_A Cell cycle arrest prote 98.4 0.00015 5.3E-09 65.1 25.5 258 40-322 22-310 (342)
182 1k32_A Tricorn protease; prote 98.4 0.00036 1.2E-08 73.5 31.9 154 179-343 248-416 (1045)
183 1k32_A Tricorn protease; prote 98.4 0.00017 5.9E-09 75.9 29.3 268 39-338 306-639 (1045)
184 3zwl_B Eukaryotic translation 98.4 0.00094 3.2E-08 60.3 35.8 259 68-353 30-321 (369)
185 3c5m_A Oligogalacturonate lyas 98.4 2.5E-05 8.6E-10 72.0 19.6 253 74-340 39-333 (396)
186 4g56_B MGC81050 protein; prote 98.4 0.00077 2.6E-08 61.8 29.3 291 33-345 46-353 (357)
187 4gqb_B Methylosome protein 50; 98.4 0.0013 4.6E-08 60.0 31.2 242 71-334 83-329 (344)
188 3ei3_B DNA damage-binding prot 98.4 0.0014 4.9E-08 60.0 33.6 185 42-253 87-283 (383)
189 2xdw_A Prolyl endopeptidase; a 98.4 0.0013 4.3E-08 66.3 32.8 267 51-338 99-416 (710)
190 3iz6_a 40S ribosomal protein R 98.4 0.0013 4.5E-08 60.6 30.6 285 34-334 71-373 (380)
191 1yfq_A Cell cycle arrest prote 98.4 0.00044 1.5E-08 62.1 26.6 249 70-344 11-290 (342)
192 3i2n_A WD repeat-containing pr 98.4 0.001 3.6E-08 59.8 29.2 280 34-334 23-351 (357)
193 3hxj_A Pyrrolo-quinoline quino 98.4 2.9E-05 9.9E-10 69.9 18.6 256 43-343 32-290 (330)
194 2ynn_A Coatomer subunit beta'; 98.3 0.0013 4.6E-08 58.5 33.2 259 70-352 13-275 (304)
195 1xfd_A DIP, dipeptidyl aminope 98.3 0.0003 1E-08 70.6 27.5 246 34-296 65-396 (723)
196 1k8k_C P40, ARP2/3 complex 41 98.3 0.0017 5.8E-08 58.8 31.9 242 72-336 10-274 (372)
197 1sq9_A Antiviral protein SKI8; 98.3 0.0013 4.4E-08 60.4 29.3 255 70-344 16-330 (397)
198 4ery_A WD repeat-containing pr 98.3 0.0017 5.9E-08 57.7 34.2 251 70-346 23-278 (312)
199 4ery_A WD repeat-containing pr 98.3 0.0018 6.1E-08 57.6 37.9 254 37-315 31-288 (312)
200 2xdw_A Prolyl endopeptidase; a 98.3 0.0032 1.1E-07 63.3 32.7 243 80-344 81-376 (710)
201 1got_B GT-beta; complex (GTP-b 98.3 0.0024 8.4E-08 57.8 37.1 269 38-330 64-337 (340)
202 3ei3_B DNA damage-binding prot 98.3 0.0011 3.8E-08 60.8 27.1 204 69-295 72-282 (383)
203 1pgu_A Actin interacting prote 98.2 0.0022 7.6E-08 62.4 29.7 255 70-345 18-292 (615)
204 3vl1_A 26S proteasome regulato 98.2 0.0036 1.2E-07 57.9 32.4 266 44-336 71-365 (420)
205 4a5s_A Dipeptidyl peptidase 4 98.2 0.0011 3.8E-08 67.0 28.2 245 38-302 70-407 (740)
206 3v9f_A Two-component system se 98.2 0.004 1.4E-07 63.3 32.5 265 44-339 271-571 (781)
207 3sfz_A APAF-1, apoptotic pepti 98.2 0.0066 2.3E-07 64.8 35.4 276 33-334 619-911 (1249)
208 4a5s_A Dipeptidyl peptidase 4 98.2 0.00037 1.3E-08 70.5 24.3 295 40-344 27-408 (740)
209 3k26_A Polycomb protein EED; W 98.2 0.0018 6.2E-08 58.4 26.7 249 69-339 17-321 (366)
210 2gop_A Trilobed protease; beta 98.2 0.0022 7.5E-08 57.8 27.2 225 71-340 15-295 (347)
211 2gop_A Trilobed protease; beta 98.2 0.0012 4.1E-08 59.6 25.1 239 49-333 42-330 (347)
212 3sfz_A APAF-1, apoptotic pepti 98.2 0.0058 2E-07 65.2 33.7 245 35-293 663-911 (1249)
213 2pbi_B Guanine nucleotide-bind 98.1 0.0047 1.6E-07 56.3 36.3 274 35-330 70-351 (354)
214 4a11_B DNA excision repair pro 98.1 0.0021 7.3E-08 58.8 25.9 209 68-296 41-277 (408)
215 3jrp_A Fusion protein of prote 98.1 0.0049 1.7E-07 55.7 28.2 237 37-294 19-286 (379)
216 3k26_A Polycomb protein EED; W 98.1 0.0048 1.6E-07 55.5 30.3 272 41-334 34-364 (366)
217 4a2l_A BT_4663, two-component 98.1 0.013 4.3E-07 59.8 33.9 263 42-338 322-616 (795)
218 1yr2_A Prolyl oligopeptidase; 98.1 0.0011 3.9E-08 67.0 25.3 242 34-299 167-445 (741)
219 3odt_A Protein DOA1; ubiquitin 98.1 0.0047 1.6E-07 54.3 30.2 252 69-353 17-272 (313)
220 3jrp_A Fusion protein of prote 98.1 0.0059 2E-07 55.2 29.5 249 70-338 11-289 (379)
221 1got_B GT-beta; complex (GTP-b 98.1 0.0059 2E-07 55.2 33.9 253 68-346 53-311 (340)
222 3frx_A Guanine nucleotide-bind 98.1 0.0057 2E-07 54.8 35.7 258 49-334 39-315 (319)
223 3v9f_A Two-component system se 98.1 0.004 1.4E-07 63.3 28.8 264 41-338 324-613 (781)
224 1z68_A Fibroblast activation p 98.1 0.00013 4.3E-09 73.5 17.4 285 42-337 28-394 (719)
225 3v7d_B Cell division control p 98.0 0.0088 3E-07 56.2 38.0 280 43-342 134-427 (464)
226 1p22_A F-BOX/WD-repeat protein 98.0 0.011 3.7E-07 55.3 30.3 264 42-339 144-417 (435)
227 1yr2_A Prolyl oligopeptidase; 98.0 0.012 4.3E-07 59.3 30.6 240 80-343 116-401 (741)
228 4e54_B DNA damage-binding prot 98.0 0.00082 2.8E-08 63.2 20.3 204 71-295 120-327 (435)
229 4a2l_A BT_4663, two-component 98.0 0.023 7.7E-07 57.9 34.8 267 44-339 186-483 (795)
230 3iuj_A Prolyl endopeptidase; h 97.9 0.0051 1.7E-07 61.7 26.3 243 35-302 134-412 (693)
231 2ovr_B FBW7, F-BOX/WD repeat p 97.9 0.015 5E-07 54.5 39.7 264 43-343 131-398 (445)
232 4e54_B DNA damage-binding prot 97.9 0.012 4.1E-07 55.1 27.5 196 34-253 124-328 (435)
233 3dm0_A Maltose-binding peripla 97.9 0.025 8.5E-07 56.5 30.8 252 69-343 381-639 (694)
234 4a9v_A PHOX; hydrolase, beta-p 97.9 0.00016 5.3E-09 69.9 13.7 122 114-240 381-552 (592)
235 3f3f_A Nucleoporin SEH1; struc 97.9 0.012 4E-07 52.2 28.9 209 69-295 10-249 (351)
236 2bkl_A Prolyl endopeptidase; m 97.9 0.018 6.1E-07 57.7 29.1 239 80-342 77-356 (695)
237 3gre_A Serine/threonine-protei 97.9 0.018 6.1E-07 53.6 27.4 264 70-345 63-368 (437)
238 3dm0_A Maltose-binding peripla 97.8 0.031 1.1E-06 55.7 35.8 225 49-297 404-634 (694)
239 4aow_A Guanine nucleotide-bind 97.8 0.015 5.1E-07 51.7 29.5 209 69-298 37-249 (340)
240 2bkl_A Prolyl endopeptidase; m 97.8 0.0054 1.8E-07 61.5 24.5 245 33-301 124-403 (695)
241 1erj_A Transcriptional repress 97.8 0.02 6.7E-07 52.9 30.7 241 34-292 128-386 (393)
242 3i2n_A WD repeat-containing pr 97.8 0.017 5.7E-07 51.7 28.1 230 42-294 81-352 (357)
243 3frx_A Guanine nucleotide-bind 97.8 0.017 5.7E-07 51.7 30.1 230 36-293 72-315 (319)
244 3mmy_A MRNA export factor; mRN 97.8 0.019 6.3E-07 51.5 26.3 259 34-323 44-334 (368)
245 3iz6_a 40S ribosomal protein R 97.7 0.027 9.2E-07 51.7 28.6 258 69-343 65-336 (380)
246 3iuj_A Prolyl endopeptidase; h 97.7 0.04 1.4E-06 55.1 29.1 243 72-338 130-407 (693)
247 1nr0_A Actin interacting prote 97.7 0.043 1.5E-06 53.9 35.2 280 33-340 63-359 (611)
248 1z68_A Fibroblast activation p 97.7 0.0028 9.6E-08 63.5 20.3 289 34-343 64-450 (719)
249 4a9v_A PHOX; hydrolase, beta-p 97.7 0.00057 2E-08 66.0 13.8 114 172-286 380-553 (592)
250 2pbi_B Guanine nucleotide-bind 97.7 0.033 1.1E-06 50.6 35.7 260 68-353 62-332 (354)
251 3dwl_C Actin-related protein 2 97.6 0.0015 5.1E-08 59.6 15.9 237 34-294 16-280 (377)
252 3vl1_A 26S proteasome regulato 97.6 0.04 1.4E-06 50.7 37.3 245 40-295 108-365 (420)
253 3mmy_A MRNA export factor; mRN 97.6 0.034 1.2E-06 49.8 30.2 260 68-354 37-322 (368)
254 3jro_A Fusion protein of prote 97.6 0.011 3.9E-07 59.8 23.0 246 71-335 10-284 (753)
255 3dw8_B Serine/threonine-protei 97.6 0.05 1.7E-06 50.5 26.8 265 69-341 27-378 (447)
256 3jro_A Fusion protein of prote 97.6 0.014 4.7E-07 59.1 23.2 240 36-295 16-285 (753)
257 2xzm_R RACK1; ribosome, transl 97.5 0.051 1.8E-06 48.9 33.0 272 40-337 38-341 (343)
258 3v7d_B Cell division control p 97.5 0.067 2.3E-06 50.0 38.0 258 43-328 175-455 (464)
259 2xe4_A Oligopeptidase B; hydro 97.5 0.082 2.8E-06 53.5 27.3 231 81-334 125-398 (751)
260 4aow_A Guanine nucleotide-bind 97.5 0.052 1.8E-06 48.1 37.2 264 49-338 60-339 (340)
261 1p22_A F-BOX/WD-repeat protein 97.4 0.075 2.6E-06 49.5 30.4 230 72-338 135-367 (435)
262 3dwl_C Actin-related protein 2 97.3 0.0058 2E-07 55.6 15.2 239 72-334 13-279 (377)
263 3f3f_A Nucleoporin SEH1; struc 97.3 0.086 2.9E-06 46.4 27.9 209 36-251 18-248 (351)
264 3dw8_B Serine/threonine-protei 97.3 0.12 4.2E-06 47.8 28.7 250 34-299 33-377 (447)
265 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.13 4.3E-06 46.9 37.8 267 43-344 55-345 (376)
266 3fm0_A Protein CIAO1; WDR39,SG 97.2 0.12 4.1E-06 46.5 33.4 283 37-338 24-337 (345)
267 2ovr_B FBW7, F-BOX/WD repeat p 97.1 0.17 5.7E-06 47.2 35.6 250 49-334 178-440 (445)
268 2oaj_A Protein SNI1; WD40 repe 97.1 0.23 8E-06 51.3 25.7 199 117-341 18-247 (902)
269 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.2 7E-06 45.4 33.4 259 43-334 105-376 (376)
270 1tl2_A L10, protein (tachylect 96.9 0.15 5.2E-06 43.2 19.0 152 113-294 37-209 (236)
271 1kb0_A Quinohemoprotein alcoho 96.9 0.41 1.4E-05 47.7 34.9 260 75-345 123-516 (677)
272 2oaj_A Protein SNI1; WD40 repe 96.8 0.42 1.4E-05 49.3 25.3 196 71-295 18-242 (902)
273 4gga_A P55CDC, cell division c 96.8 0.3 1E-05 45.1 36.1 269 42-334 117-393 (420)
274 4h5i_A Guanine nucleotide-exch 96.8 0.3 1E-05 44.4 26.4 197 73-294 136-342 (365)
275 1tl2_A L10, protein (tachylect 96.8 0.084 2.9E-06 44.7 15.7 147 175-334 40-208 (236)
276 2xzm_R RACK1; ribosome, transl 96.7 0.33 1.1E-05 43.5 29.9 241 72-338 23-287 (343)
277 4h5i_A Guanine nucleotide-exch 96.7 0.37 1.3E-05 43.8 30.7 196 119-334 136-341 (365)
278 2oit_A Nucleoporin 214KDA; NH2 96.6 0.45 1.5E-05 44.5 25.7 228 71-315 93-368 (434)
279 2ad6_A Methanol dehydrogenase 96.6 0.57 2E-05 45.7 36.8 78 267-345 389-503 (571)
280 3gre_A Serine/threonine-protei 96.6 0.43 1.5E-05 44.0 27.3 234 40-297 75-361 (437)
281 4gga_A P55CDC, cell division c 96.5 0.48 1.7E-05 43.7 29.1 237 34-294 152-394 (420)
282 2hes_X YDR267CP; beta-propelle 96.5 0.43 1.5E-05 42.5 30.2 244 71-337 15-281 (330)
283 3fm0_A Protein CIAO1; WDR39,SG 96.4 0.49 1.7E-05 42.4 30.2 241 34-295 66-335 (345)
284 4ggc_A P55CDC, cell division c 96.3 0.5 1.7E-05 41.1 35.2 269 42-334 37-313 (318)
285 2xe4_A Oligopeptidase B; hydro 96.3 1.1 3.9E-05 45.1 27.6 198 72-293 175-398 (751)
286 2pm7_B Protein transport prote 96.1 0.62 2.1E-05 40.6 30.7 245 70-333 9-282 (297)
287 2pm7_B Protein transport prote 96.1 0.65 2.2E-05 40.5 32.4 235 38-292 18-282 (297)
288 3b7f_A Glycosyl hydrolase, BNR 96.0 0.95 3.2E-05 41.5 26.6 299 42-355 23-390 (394)
289 3lrv_A PRE-mRNA-splicing facto 95.8 0.95 3.3E-05 40.3 28.1 159 117-295 126-292 (343)
290 3zwu_A Alkaline phosphatase PH 95.8 0.15 5.1E-06 49.9 13.9 111 172-283 380-550 (592)
291 3bg1_A Protein SEC13 homolog; 95.7 0.98 3.4E-05 39.8 24.0 236 40-292 24-290 (316)
292 3zwu_A Alkaline phosphatase PH 95.6 0.19 6.4E-06 49.1 14.1 124 115-239 382-551 (592)
293 3vu4_A KMHSV2; beta-propeller 95.3 1.5 5.2E-05 39.3 33.5 225 34-295 24-271 (355)
294 3bg1_A Protein SEC13 homolog; 95.2 1.4 4.9E-05 38.7 22.5 244 71-333 14-290 (316)
295 1kv9_A Type II quinohemoprotei 95.1 2.9 9.9E-05 41.4 34.0 256 82-345 117-497 (668)
296 4ggc_A P55CDC, cell division c 94.5 2.1 7.1E-05 37.0 29.3 237 33-293 71-313 (318)
297 3ott_A Two-component system se 94.5 4.3 0.00015 40.6 30.3 249 40-324 31-297 (758)
298 2ad6_A Methanol dehydrogenase 94.4 3.9 0.00013 39.7 28.8 98 222-323 389-524 (571)
299 3lrv_A PRE-mRNA-splicing facto 94.3 2.7 9.3E-05 37.2 27.9 157 71-251 126-291 (343)
300 1w6s_A Methanol dehydrogenase 93.9 5.2 0.00018 39.1 34.0 31 312-343 480-510 (599)
301 1sqj_A OXG-RCBH, oligoxylogluc 93.5 7.3 0.00025 39.4 26.5 256 71-344 15-340 (789)
302 1kb0_A Quinohemoprotein alcoho 93.2 7.3 0.00025 38.6 31.5 139 82-239 77-263 (677)
303 2j04_B YDR362CP, TAU91; beta p 93.1 6.3 0.00022 37.7 18.5 223 50-295 183-428 (524)
304 2hes_X YDR267CP; beta-propelle 93.0 4.4 0.00015 35.7 30.9 263 49-334 33-326 (330)
305 2oit_A Nucleoporin 214KDA; NH2 93.0 5.7 0.0002 36.8 25.1 200 118-334 94-331 (434)
306 2j04_A TAU60, YPL007P, hypothe 92.9 3.6 0.00012 40.0 16.0 152 177-339 87-257 (588)
307 4gq1_A NUP37; propeller, trans 92.9 5.3 0.00018 36.2 24.5 196 49-253 165-390 (393)
308 2cn3_A Xyloglucanase, beta-1,4 92.7 8.9 0.0003 38.4 25.5 254 72-343 24-343 (737)
309 1yiq_A Quinohemoprotein alcoho 92.6 8.9 0.0003 38.1 34.0 59 286-345 455-514 (689)
310 3b7f_A Glycosyl hydrolase, BNR 92.5 6.1 0.00021 35.9 23.9 224 72-314 116-390 (394)
311 2j04_A TAU60, YPL007P, hypothe 92.3 8.8 0.0003 37.3 19.5 173 70-271 85-273 (588)
312 2j04_B YDR362CP, TAU91; beta p 92.2 8.5 0.00029 36.8 18.5 235 85-333 175-425 (524)
313 3vu4_A KMHSV2; beta-propeller 92.1 6.2 0.00021 35.2 28.6 230 71-337 20-272 (355)
314 4gq1_A NUP37; propeller, trans 91.8 7.2 0.00025 35.3 24.6 241 49-295 110-389 (393)
315 3ott_A Two-component system se 91.7 12 0.0004 37.5 34.6 261 41-336 73-352 (758)
316 3a0f_A Xyloglucanase; beta-pro 89.5 19 0.00065 36.2 21.1 256 69-343 19-351 (763)
317 1kv9_A Type II quinohemoprotei 89.1 18 0.00063 35.6 27.5 64 82-151 66-140 (668)
318 2xbg_A YCF48-like protein; pho 84.0 22 0.00074 31.3 32.0 260 40-334 46-320 (327)
319 1w6s_A Methanol dehydrogenase 80.9 43 0.0015 32.6 28.8 32 121-152 245-291 (599)
320 1sqj_A OXG-RCBH, oligoxylogluc 77.8 61 0.0021 32.6 28.4 231 49-296 36-334 (789)
321 1yiq_A Quinohemoprotein alcoho 74.2 71 0.0024 31.5 30.9 64 82-151 70-144 (689)
322 2hz6_A Endoplasmic reticulum t 70.2 1.9 6.6E-05 39.1 2.2 138 187-341 48-197 (369)
323 1xip_A Nucleoporin NUP159; bet 63.8 87 0.003 28.5 14.8 169 33-236 41-230 (388)
324 3a0f_A Xyloglucanase; beta-pro 61.2 1.4E+02 0.0046 29.9 23.2 198 73-295 546-762 (763)
325 2xbg_A YCF48-like protein; pho 60.3 86 0.003 27.3 27.9 241 71-345 36-287 (327)
326 2cn3_A Xyloglucanase, beta-1,4 58.4 1.5E+02 0.0051 29.4 25.4 235 49-296 44-338 (737)
327 3sbq_A Nitrous-oxide reductase 57.6 42 0.0014 32.5 8.8 96 51-148 299-408 (638)
328 1flg_A Protein (quinoprotein e 49.8 1.8E+02 0.0062 27.8 26.0 16 179-194 415-430 (582)
329 1flg_A Protein (quinoprotein e 44.6 2.2E+02 0.0074 27.3 36.6 75 268-344 416-524 (582)
330 3s9j_A Member of DUF4221 famil 35.0 1.9E+02 0.0066 26.0 9.2 73 130-213 41-116 (369)
331 4asc_A Kelch repeat and BTB do 34.6 2.1E+02 0.0073 24.2 20.1 242 44-321 7-302 (315)
332 2be1_A Serine/threonine-protei 29.1 1.1E+02 0.0036 27.4 6.4 19 275-293 55-74 (339)
333 2zux_A YESW protein; beta-prop 25.1 4.7E+02 0.016 25.2 26.0 108 181-295 295-423 (591)
334 2hz6_A Endoplasmic reticulum t 23.4 1.2E+02 0.0042 26.8 5.8 66 274-343 8-75 (369)
335 2woz_A Kelch repeat and BTB do 23.2 3.4E+02 0.012 22.9 22.1 236 50-321 24-312 (318)
336 3s9j_A Member of DUF4221 famil 22.4 2.2E+02 0.0075 25.6 7.2 67 276-343 40-116 (369)
337 3f6k_A Sortilin; protein sorti 21.7 5.8E+02 0.02 25.1 24.8 157 92-282 64-240 (685)
338 3f6k_A Sortilin; protein sorti 20.1 6.3E+02 0.021 24.8 23.1 92 51-149 66-169 (685)
No 1
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=3.4e-46 Score=372.13 Aligned_cols=314 Identities=55% Similarity=1.036 Sum_probs=274.1
Q ss_pred CCCCeEEEEEeCCcEEEEEcCCCC-cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc
Q psy13635 38 HVAAQMLLFATSKDIRIANLSRPL-KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL 116 (357)
Q Consensus 38 ~~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 116 (357)
+-..|.|+++++++|+++++++.. ...++++.+..|.||++++.++.|||+|..+++|++++++|+. ..+.++..++
T Consensus 6 ~~~~~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--~~~~v~~~~~ 83 (619)
T 3s94_A 6 HHHAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--SVQNVVVSGL 83 (619)
T ss_dssp ----CCEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------CEEEECSSC
T ss_pred cccCceEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--ceEEEEeCCC
Confidence 345789999999999999998853 6778889999999999999999999999999999999999974 2356777888
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeee------c---------------------
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASY------K--------------------- 169 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~------~--------------------- 169 (357)
..|.|||+||.+++|||+|...++|.+++++|+.++++....+..|++|++. +
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 9999999999999999999999999999999999988888888899999881 0
Q ss_pred --------------------------------------------------------------------------------
Q psy13635 170 -------------------------------------------------------------------------------- 169 (357)
Q Consensus 170 -------------------------------------------------------------------------------- 169 (357)
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSS
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy13635 170 -------------------------------------------------------------------------------- 169 (357)
Q Consensus 170 -------------------------------------------------------------------------------- 169 (357)
T Consensus 244 g~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~ 323 (619)
T 3s94_A 244 GEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLA 323 (619)
T ss_dssp CCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEE
T ss_pred CcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEE
Confidence
Q ss_pred -------------------cC-------------------------------------------cccccCCceEEEeCCC
Q psy13635 170 -------------------LP-------------------------------------------TIEVEHPDGVAVDWVA 187 (357)
Q Consensus 170 -------------------~~-------------------------------------------~~~~~~p~glavD~~~ 187 (357)
+| ..++..|.|||+||.+
T Consensus 324 ~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~ 403 (619)
T 3s94_A 324 RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVA 403 (619)
T ss_dssp ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT
T ss_pred cccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEeccc
Confidence 00 2345689999999999
Q ss_pred CeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCce
Q psy13635 188 RNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
++|||+|.+.++|++++++|+.++++..+.+..|++|++||.+|.|||+|++.. ++|+++++||+.++.++...+.+|+
T Consensus 404 ~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~-~~I~r~~~dG~~~~~l~~~~l~~P~ 482 (619)
T 3s94_A 404 RNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEI-PKIERAALDGSDRVVLVNTSLGWPN 482 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCSCEEEECSSCSCEE
T ss_pred CcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCC-CEEEEEccCCCccEEEEeCCCCCCe
Confidence 999999999999999999999988888888999999999999999999999864 7999999999999999888899999
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEeccc
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIERS 347 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l 347 (357)
||++|+.+++|||+|.+.++|++++++|+.++.++...+.+|+||++++++|||||+.+++|+++++.+| ..+++..++
T Consensus 483 GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g-~~~~~~~~~ 561 (619)
T 3s94_A 483 GLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA-EREVIIDQL 561 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSSC-CEEEEECSC
T ss_pred eeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCC-ceEEEecCC
Confidence 9999999999999999999999999999999888877899999999999999999999999999999888 668889999
Q ss_pred CCceeeee
Q psy13635 348 CTGVTRRR 355 (357)
Q Consensus 348 ~~p~~i~~ 355 (357)
.+|++|+-
T Consensus 562 ~~~~~i~~ 569 (619)
T 3s94_A 562 PDLMGLKA 569 (619)
T ss_dssp CCEEEEEE
T ss_pred CCCceeee
Confidence 99999974
No 2
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=1.4e-43 Score=353.64 Aligned_cols=318 Identities=27% Similarity=0.495 Sum_probs=275.8
Q ss_pred EEEEEeecCCCCeEEEEEe---CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc
Q psy13635 30 HFWYALSHHVAAQMLLFAT---SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG 106 (357)
Q Consensus 30 ~~~~~~~~~~~~~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 106 (357)
.-+.+++..+....||+++ ...|.+++++|. ..+.+...+..|.||++|+.+++|||+|...+.|.+++++|+.
T Consensus 123 ~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~-- 199 (628)
T 4a0p_A 123 DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-ERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN-- 199 (628)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--
T ss_pred CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC-ceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc--
Confidence 3467788887788999998 457999999984 4555567899999999999999999999999999999999986
Q ss_pred eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc-CCCceEEEEecCCCCcceeeeec----------------
Q psy13635 107 SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL-DGKKRKVLYWEDIDQPRAIASYK---------------- 169 (357)
Q Consensus 107 ~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~-~g~~~~~~~~~~~~~p~~i~~~~---------------- 169 (357)
.+++...+..|.|||++ +++|||||..+++|.+++. .|+..+++ ..++..|.+|.++.
T Consensus 200 --~~v~~~~l~~P~glav~--~~~ly~tD~~~~~I~~~dk~tg~~~~~l-~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~ 274 (628)
T 4a0p_A 200 --REVIADDLPHPFGLTQY--QDYIYWTDWSRRSIERANKTSGQNRTII-QGHLDYVMDILVFHSSRQSGWNECASSNGH 274 (628)
T ss_dssp --CEEEEECCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEE-ECSCCSCCEEEEECGGGSCCCCTTTTTGGG
T ss_pred --eEEeeccCCCceEEEEE--CCEEEEecCCCCEEEEEECCCCCceEEE-ecCCCCcceeeeeeecccccceEeccCCCC
Confidence 45677788999999999 5899999999999999995 56655544 34444555554410
Q ss_pred -----------------------------------------------------------cC-------------------
Q psy13635 170 -----------------------------------------------------------LP------------------- 171 (357)
Q Consensus 170 -----------------------------------------------------------~~------------------- 171 (357)
+|
T Consensus 275 C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~i 354 (628)
T 4a0p_A 275 CSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQL 354 (628)
T ss_dssp CSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEE
T ss_pred cchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeE
Confidence 00
Q ss_pred ------------------------c------ccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCc
Q psy13635 172 ------------------------T------IEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEP 221 (357)
Q Consensus 172 ------------------------~------~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P 221 (357)
. ..+..|.|||+||.+++|||+|...++|++++++|+.++++....+..|
T Consensus 355 y~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~P 434 (628)
T 4a0p_A 355 YWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRP 434 (628)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCE
T ss_pred EEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCce
Confidence 1 1345799999999999999999999999999999999888888789999
Q ss_pred eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEE
Q psy13635 222 RAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRREL 301 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i 301 (357)
++|++||.+|.|||+|++...++|+++++||+.++.++...+.+|+||++|+.+++|||+|...++|++++++|++++.+
T Consensus 435 r~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~ 514 (628)
T 4a0p_A 435 RAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVL 514 (628)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred eeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEE
Confidence 99999999999999999864128999999999999999888999999999998999999999999999999999999988
Q ss_pred ecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 302 INENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 302 ~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
...++.+|+||++++++||||||.+++|+++++.+|+..+.+...+.+|++|+.
T Consensus 515 ~~~~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~~~~~~~~i~~ 568 (628)
T 4a0p_A 515 EDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHA 568 (628)
T ss_dssp ECSSCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEECCCTTEEEEEE
T ss_pred EcCCCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEeccCCCCcceEE
Confidence 877889999999999999999999999999999899999999999999999864
No 3
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=5.4e-42 Score=315.78 Aligned_cols=256 Identities=39% Similarity=0.806 Sum_probs=215.8
Q ss_pred CCCCeEEEEEeCCcEEEEEcCCCC-cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc
Q psy13635 38 HVAAQMLLFATSKDIRIANLSRPL-KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL 116 (357)
Q Consensus 38 ~~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 116 (357)
++++|+|+|+++++|+++++++.. ..+++++++..+.++++|+.+++|||+|...+.|++++++|+. ..+.++..++
T Consensus 1 ~g~~p~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~--~~~~~~~~~l 78 (318)
T 3sov_A 1 AGSAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--SVQNVVVSGL 78 (318)
T ss_dssp ---CCEEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSS--CCCEEEEECC
T ss_pred CCCccEEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCC--ceEEEEcCCC
Confidence 367899999999999999999854 5777888899999999999999999999999999999999874 1122333333
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
. .|.|||+||.+++|||+|..
T Consensus 79 ~-----------------------------------------------------------~p~glavd~~~g~ly~~d~~ 99 (318)
T 3sov_A 79 L-----------------------------------------------------------SPDGLACDWLGEKLYWTDSE 99 (318)
T ss_dssp S-----------------------------------------------------------CCCEEEEETTTTEEEEEETT
T ss_pred C-----------------------------------------------------------CccEEEEEcCCCeEEEEECC
Confidence 3 45555555555666666666
Q ss_pred CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCC
Q psy13635 197 TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNE 276 (357)
Q Consensus 197 ~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~ 276 (357)
.++|++++++|..++++....+..|+||++||.+|+|||+|++.. ++|++++++|+.++.++..++..|+||++|+.++
T Consensus 100 ~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~-~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~ 178 (318)
T 3sov_A 100 TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV-PKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQ 178 (318)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSS-CEEEEEETTSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCC-CEEEEEEcCCCCeEEEEECCCCCccEEEEeccCC
Confidence 666666666666666666567889999999998999999998743 7999999999999988888899999999999899
Q ss_pred EEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 277 KLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 277 ~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
+|||+|...++|++++++|+.++.+....+.+|.||+++++.+||+|+.+++|.++++.+|+..+.+..++..|++|+-
T Consensus 179 ~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v 257 (318)
T 3sov_A 179 KLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHA 257 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEE
T ss_pred EEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEE
Confidence 9999999999999999999999888876789999999999999999999999999999889999999999999999874
No 4
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=3.8e-40 Score=313.00 Aligned_cols=256 Identities=33% Similarity=0.651 Sum_probs=213.7
Q ss_pred CCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc-ceeEEEEeCCcC
Q psy13635 39 VAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV-GSKHNVITNGLI 117 (357)
Q Consensus 39 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~~~ 117 (357)
++.|+|+++++++|+++++++ ...+.+++.+..|.+|++|+.+++|||+|...+.|++++++|... .....++..++.
T Consensus 81 ~~~~~ll~~~~~~I~~i~l~~-~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 81 GSIAYLFFTNRHEVRKMTLDR-SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp TTSCEEEEEETTEEEEECTTS-CSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred cccceeEEeccceeEEEccCC-cceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 468999999999999999988 567777889999999999999999999999999999999988520 011223333333
Q ss_pred CceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 118 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
.|.|||+||.+++|||+|...
T Consensus 160 -----------------------------------------------------------~p~glavD~~~~~lY~~d~~~ 180 (400)
T 3p5b_L 160 -----------------------------------------------------------APDGLAVDWIHSNIYWTDSVL 180 (400)
T ss_dssp -----------------------------------------------------------CEEEEEEETTTTEEEEEETTT
T ss_pred -----------------------------------------------------------CcccEEEEecCCceEEEECCC
Confidence 455555555566666666666
Q ss_pred CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCE
Q psy13635 198 DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEK 277 (357)
Q Consensus 198 ~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~ 277 (357)
++|++++++|..+++++...+..|++|++||..|+|||+|++.. ++|++++++|+.++.++..++.+|+||++|+.+++
T Consensus 181 ~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~-~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~ 259 (400)
T 3p5b_L 181 GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGR 259 (400)
T ss_dssp TEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSS-CCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred CeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCC-CEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCE
Confidence 66666667776666666667888999999999999999999853 69999999999999998888999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEecC--CCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 278 LYWCDAKTDKIEMIDFDGNNRRELINE--NLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 278 lY~~d~~~~~I~~~~~dG~~~~~i~~~--~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
|||+|...++|++++++|..++.++.. .+.+|.||++++++|||+||.+++|+++++.+|+..+.+..++..|++|+-
T Consensus 260 lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 260 LYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 999999999999999999998888753 578999999999999999999999999998899999999999999999864
No 5
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=7.1e-40 Score=305.74 Aligned_cols=251 Identities=35% Similarity=0.728 Sum_probs=228.6
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCC
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQ 161 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~ 161 (357)
+..|++++. ..|++++++|.. .+.+..++..|.|+++|+.++.|||+|...++|.+++++|+..+.+...
T Consensus 44 ~~~ll~~~~--~~I~~i~~~g~~----~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~---- 113 (349)
T 3v64_C 44 EPVLLFANR--IDIRQVLPHRSE----YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST---- 113 (349)
T ss_dssp CCEEEEECB--SCEEEECTTSCC----EEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----
T ss_pred CceeEeecc--cceEEEeCCCCe----eEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC----
Confidence 567888865 469999999985 6667778899999999999999999999999999999999887776533
Q ss_pred cceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 162 PRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 162 p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
++..|.|||+||.+++|||+|...++|++++++|+.++.+....+..|++|++||.+|.|||+|++..
T Consensus 114 ------------~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~ 181 (349)
T 3v64_C 114 ------------GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT 181 (349)
T ss_dssp ------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSS
T ss_pred ------------CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCC
Confidence 34589999999999999999999999999999999988888778899999999999999999999862
Q ss_pred CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEE
Q psy13635 242 RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYW 321 (357)
Q Consensus 242 ~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~ 321 (357)
++|++++++|+.++.++..++..|+||++|+.+++|||+|...++|++++++|+.++.++...+.+|.||++++++|||
T Consensus 182 -~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~ 260 (349)
T 3v64_C 182 -PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYW 260 (349)
T ss_dssp -CEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEE
T ss_pred -CEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEE
Confidence 6999999999999988878899999999999999999999999999999999999888887778999999999999999
Q ss_pred EeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 322 TDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 322 td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
+|+.+++|.++++.+|+..+.+..++..|++|+.
T Consensus 261 td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 261 TDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp EETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred ecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 9999999999998899999999999999999874
No 6
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-39 Score=302.01 Aligned_cols=257 Identities=34% Similarity=0.640 Sum_probs=229.5
Q ss_pred EeecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe
Q psy13635 34 ALSHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
|.+.. ++++|++++.++|+++++++ ...+.+.+.+..|.++++|+.++.|||+|...+.|++++++|+. ...++.
T Consensus 38 C~~~~-~~~~ll~~~~~~I~~i~~~g-~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~---~~~~~~ 112 (349)
T 3v64_C 38 CKALG-PEPVLLFANRIDIRQVLPHR-SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN---VEEVVS 112 (349)
T ss_dssp EEESS-SCCEEEEECBSCEEEECTTS-CCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC
T ss_pred ccccc-cCceeEeecccceEEEeCCC-CeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCC---ceEEEe
Confidence 34433 48999999999999999988 56777788999999999999999999999999999999999985 355667
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
.++..|.|+|+||.+++|||+|...++|.+++++|..++.+... .+..|+|||+|+.++.|||+
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~----------------~l~~P~~iavdp~~g~ly~t 176 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ----------------SLEKPRAIALHPMEGTIYWT 176 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT----------------TCSCEEEEEEETTTTEEEEE
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeC----------------CCCCcceEEEecCcCeEEEe
Confidence 78899999999999999999999999999999999988777633 34689999999999999999
Q ss_pred eCCC-CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEe
Q psy13635 194 DTGT-DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLD 272 (357)
Q Consensus 194 d~~~-~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid 272 (357)
|.+. ++|++++++|+.++.++...+..|+||++|+.+++|||+|+.. ++|++++++|+.++.++...+.+|.||+++
T Consensus 177 d~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~--~~I~~~~~dG~~~~~~~~~~~~~P~giav~ 254 (349)
T 3v64_C 177 DWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH--HVIERANLDGSHRKAVISQGLPHPFAITVF 254 (349)
T ss_dssp ECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSCSSEEEEEEE
T ss_pred ccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCC--CEEEEEeCCCCceEEEEeCCCCCceEEEEE
Confidence 9998 8999999999988888777889999999999899999999985 599999999999988888889999999994
Q ss_pred cCCCEEEEEeCCCCeEEEEe-CCCCCeEEEecCCCCceEEEEEEC
Q psy13635 273 VDNEKLYWCDAKTDKIEMID-FDGNNRRELINENLPHVFGISLLG 316 (357)
Q Consensus 273 ~~~~~lY~~d~~~~~I~~~~-~dG~~~~~i~~~~~~~p~gia~~~ 316 (357)
+++|||+|+.+++|.+++ .+|...+.+. ..+..|.||+++.
T Consensus 255 --~~~ly~td~~~~~V~~~~~~~G~~~~~i~-~~~~~p~gi~v~~ 296 (349)
T 3v64_C 255 --EDSLYWTDWHTKSINSANKFTGKNQEIIR-NKLHFPMDIHTLH 296 (349)
T ss_dssp --TTEEEEEETTTTEEEEEETTTCCSCEEEE-CSCSCCCCEEEEC
T ss_pred --CCEEEEecCCCCeEEEEEccCCCccEEec-cCCCCCceEEEEc
Confidence 789999999999999999 6888887665 4688999999984
No 7
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=4.9e-39 Score=296.12 Aligned_cols=254 Identities=33% Similarity=0.659 Sum_probs=209.9
Q ss_pred CeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc-eeEEEEeCCcCCc
Q psy13635 41 AQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG-SKHNVITNGLITP 119 (357)
Q Consensus 41 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~~~~~~~~~p 119 (357)
+|+|+|+++++|+++|+++ .....+++.+..|.++++|+.+++|||+|...+.|++++++|.... ....++..++
T Consensus 1 ~~~ll~~~~~~I~~i~~~~-~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~--- 76 (316)
T 1ijq_A 1 IAYLFFTNRHEVRKMTLDR-SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--- 76 (316)
T ss_dssp CCEEEEECBSSEEEEETTS-CCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC---
T ss_pred CCEEEEECCCeEEEEECCC-cceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC---
Confidence 4899999999999999988 4566677889999999999999999999999999999999873100 0111222222
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCe
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDR 199 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~ 199 (357)
..|.|||+||.+++|||+|...++
T Consensus 77 --------------------------------------------------------~~p~glavd~~~~~ly~~d~~~~~ 100 (316)
T 1ijq_A 77 --------------------------------------------------------QAPDGLAVDWIHSNIYWTDSVLGT 100 (316)
T ss_dssp --------------------------------------------------------SCCCEEEEETTTTEEEEEETTTTE
T ss_pred --------------------------------------------------------CCcCEEEEeecCCeEEEEECCCCE
Confidence 256666666666667777766667
Q ss_pred EEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEE
Q psy13635 200 IEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLY 279 (357)
Q Consensus 200 I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY 279 (357)
|.+++++|+..+.+....+..|++|++||.+|+|||+|++.. ++|++++++|+.++.+....+..|+||++|+.+++||
T Consensus 101 I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~-~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 101 VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLY 179 (316)
T ss_dssp EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred EEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCC-CeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEE
Confidence 777777777666666656789999999998999999998852 6999999999999888877899999999999999999
Q ss_pred EEeCCCCeEEEEeCCCCCeEEEecC--CCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 280 WCDAKTDKIEMIDFDGNNRRELINE--NLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 280 ~~d~~~~~I~~~~~dG~~~~~i~~~--~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
|+|...++|++++++|+.++.+... .+.+|.||+++++++||+|+.+++|.++++.+|+..+.+..++..|++|+-
T Consensus 180 ~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~~~~~p~~i~v 257 (316)
T 1ijq_A 180 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 257 (316)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEE
T ss_pred EEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEecCCCCceEEEE
Confidence 9999999999999999988877653 578999999999999999999999999999899999999999999999863
No 8
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=1.4e-39 Score=324.70 Aligned_cols=253 Identities=41% Similarity=0.788 Sum_probs=210.2
Q ss_pred CCCCeEEEEEeCCcEEEEEcCCCCc-ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc
Q psy13635 38 HVAAQMLLFATSKDIRIANLSRPLK-PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL 116 (357)
Q Consensus 38 ~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 116 (357)
..+++||+|+++++|+++++++... ..+++..+..|.||+||+.+++|||+|..++.|++++++|+. .+.++..++
T Consensus 3 ~~p~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~---~~~v~~~g~ 79 (628)
T 4a0p_A 3 GVPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA---LEHVVEFGL 79 (628)
T ss_dssp --CCCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSC
T ss_pred CCCCcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC---cEEEEeCCC
Confidence 4578999999999999999987433 223456788999999999999999999999999999999874 233444444
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
.. |.|||+||.+++|||+|..
T Consensus 80 ~~-----------------------------------------------------------P~GlAvD~~~~~LY~tD~~ 100 (628)
T 4a0p_A 80 DY-----------------------------------------------------------PEGMAVDWLGKNLYWADTG 100 (628)
T ss_dssp SC-----------------------------------------------------------CCEEEEETTTTEEEEEETT
T ss_pred CC-----------------------------------------------------------cceEEEEeCCCEEEEEECC
Confidence 44 5555555555555555555
Q ss_pred CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCC
Q psy13635 197 TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNE 276 (357)
Q Consensus 197 ~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~ 276 (357)
.++|++++++|+.++++....+..|++|++||..|.|||+|++.. ++|+++++||+.++.++ ..+.+|+||++|+.++
T Consensus 101 ~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~-~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 101 TNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGK-PKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKR 178 (628)
T ss_dssp TTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTT
T ss_pred CCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCC-CEEEEEeCCCCceEEEE-CCCCCcceEEEccccC
Confidence 566666666666666666567789999999999999999999753 79999999999998887 5789999999999899
Q ss_pred EEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 277 KLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 277 ~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
+|||+|...++|++++++|..++ ++...+.+|+||++++++||||||.+++|.++++.+|+..+++..++..|++|+-
T Consensus 179 ~LY~aD~~~~~I~~~d~dG~~~~-v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v 256 (628)
T 4a0p_A 179 RLYWTDLDTNLIESSNMLGLNRE-VIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILV 256 (628)
T ss_dssp EEEEEETTTTEEEEEETTSCSCE-EEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEE
T ss_pred EEEEEECCCCEEEEEcCCCCceE-EeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeee
Confidence 99999999999999999999885 4556789999999999999999999999999999999999999999999999863
No 9
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-39 Score=306.09 Aligned_cols=251 Identities=35% Similarity=0.728 Sum_probs=229.2
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCC
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQ 161 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~ 161 (357)
+..|++++. ..|+++++++.. .+.+..++..|.|+++|+.++.|||+|...++|.+++++|+..+.++..
T Consensus 87 ~~~l~~~~~--~~I~~i~~~~~~----~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~---- 156 (386)
T 3v65_B 87 EPVLLFANR--IDIRQVLPHRSE----YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST---- 156 (386)
T ss_dssp CCEEEEECB--SCEEEECTTSCC----CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS----
T ss_pred cceeEeecC--ccceeeccCCCc----EEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC----
Confidence 577888765 579999999875 5666778899999999999999999999999999999999887776533
Q ss_pred cceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 162 PRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 162 p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
++..|.|||+||.+++|||+|...++|++++++|+.++.+....+..|++|++||.+|+|||+|++..
T Consensus 157 ------------~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~ 224 (386)
T 3v65_B 157 ------------GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT 224 (386)
T ss_dssp ------------SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSS
T ss_pred ------------CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCC
Confidence 34589999999999999999999999999999999988888888899999999999999999999862
Q ss_pred CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEE
Q psy13635 242 RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYW 321 (357)
Q Consensus 242 ~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~ 321 (357)
++|++++++|+.++.++..++..|+||++|+.+++|||+|...++|++++++|+.++.++...+.+|.||+++++.|||
T Consensus 225 -~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~ 303 (386)
T 3v65_B 225 -PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYW 303 (386)
T ss_dssp -CEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEE
T ss_pred -CEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEE
Confidence 6999999999999999888899999999999999999999999999999999999888887788999999999999999
Q ss_pred EeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 322 TDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 322 td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
+|+.+++|.++++.+|+..+.+..++..|++|+.
T Consensus 304 td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 304 TDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp EETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred eeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 9999999999998899999999999999999874
No 10
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=323.02 Aligned_cols=256 Identities=33% Similarity=0.656 Sum_probs=215.9
Q ss_pred CCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc-ceeEEEEeCCcC
Q psy13635 39 VAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV-GSKHNVITNGLI 117 (357)
Q Consensus 39 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~~~ 117 (357)
++.++|+++++++|+++++++ ..+..++..+..|.||++|+.+++|||+|...++|++++++|... .....++..++
T Consensus 393 ~~~p~Ll~an~~~Ir~i~l~~-~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l- 470 (791)
T 3m0c_C 393 GSIAYLFFTNRHEVRKMTLDR-SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI- 470 (791)
T ss_dssp TSCCEEEEECBSSEEEECTTS-CCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC-
T ss_pred ccccccccccccceeEeeccC-CcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC-
Confidence 578899999999999999987 567777889999999999999999999999999999999987520 00122222233
Q ss_pred CceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 118 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
..|.||||||.+++|||+|...
T Consensus 471 ----------------------------------------------------------~~P~GLAvD~~~~~LY~tD~~~ 492 (791)
T 3m0c_C 471 ----------------------------------------------------------QAPDGLAVDWIHSNIYWTDSVL 492 (791)
T ss_dssp ----------------------------------------------------------SCCCEEEEETTTTEEEEEETTT
T ss_pred ----------------------------------------------------------CCcceeeeeecCCcEEEEecCC
Confidence 3566666666666677777666
Q ss_pred CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCE
Q psy13635 198 DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEK 277 (357)
Q Consensus 198 ~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~ 277 (357)
++|++++++|+.+++++...+..|+||||||..|+|||+|++.. ++|++++++|+.+++++...+.+|+||++|+.+++
T Consensus 493 ~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~-~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~ 571 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGR 571 (791)
T ss_dssp TEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTE
T ss_pred CeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCC-CeEEEEecCCCceEEEEeCCCCCceEEEEecCCCe
Confidence 77777777777777776667888999999999999999999863 69999999999999999889999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEecC--CCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 278 LYWCDAKTDKIEMIDFDGNNRRELINE--NLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 278 lY~~d~~~~~I~~~~~dG~~~~~i~~~--~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
|||+|.+.++|++++++|..++.++.. .+.+|+||++++++|||||+.+++|+++++.+|+.++++..++..|++|+-
T Consensus 572 LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v 651 (791)
T 3m0c_C 572 LYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 651 (791)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEE
T ss_pred EEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEee
Confidence 999999999999999999999888764 578999999999999999999999999999999999999999999999864
No 11
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-38 Score=299.52 Aligned_cols=252 Identities=35% Similarity=0.657 Sum_probs=227.9
Q ss_pred CCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc
Q psy13635 40 AAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP 119 (357)
Q Consensus 40 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p 119 (357)
+.++|++++.+.|+++++++ ...+.+.+.+..|.++++|+.++.|||+|...+.|++++++|+. .+.++..++..|
T Consensus 86 ~~~~l~~~~~~~I~~i~~~~-~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~---~~~~~~~~~~~p 161 (386)
T 3v65_B 86 PEPVLLFANRIDIRQVLPHR-SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN---VEEVVSTGLESP 161 (386)
T ss_dssp SCCEEEEECBSCEEEECTTS-CCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC---EEEEECSSCSCC
T ss_pred ccceeEeecCccceeeccCC-CcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC---cEEEEeCCCCCc
Confidence 48999999999999999987 56777788999999999999999999999999999999999985 356677788999
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC-C
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT-D 198 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~-~ 198 (357)
.|||+||.+++|||+|...++|.+++++|..++.++.. .+..|+||++|+.++.|||+|.+. +
T Consensus 162 ~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~----------------~l~~P~giavdp~~g~ly~td~~~~~ 225 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ----------------SLEKPRAIALHPMEGTIYWTDWGNTP 225 (386)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECS----------------SCSCEEEEEEETTTTEEEEEECSSSC
T ss_pred cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC----------------CCCCCcEEEEEcCCCeEEEeccCCCC
Confidence 99999999999999999999999999999988777633 446899999999999999999998 8
Q ss_pred eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEE
Q psy13635 199 RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKL 278 (357)
Q Consensus 199 ~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~l 278 (357)
+|++++++|+.+..++...+..|+||++|+.+++|||+|... ++|++++++|+.++.++...+..|.||+++ ++.|
T Consensus 226 ~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~--~~I~~~d~dG~~~~~~~~~~~~~P~giav~--~~~l 301 (386)
T 3v65_B 226 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH--HVIERANLDGSHRKAVISQGLPHPFAITVF--EDSL 301 (386)
T ss_dssp EEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTT--TEEEEECTTSCSCEEEECSSCSSEEEEEEE--TTEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCC--CEEEEEeCCCCeeEEEEECCCCCceEEEEE--CCEE
Confidence 999999999999888887889999999999899999999985 599999999999998888889999999994 7899
Q ss_pred EEEeCCCCeEEEEe-CCCCCeEEEecCCCCceEEEEEEC
Q psy13635 279 YWCDAKTDKIEMID-FDGNNRRELINENLPHVFGISLLG 316 (357)
Q Consensus 279 Y~~d~~~~~I~~~~-~dG~~~~~i~~~~~~~p~gia~~~ 316 (357)
||+|+.+++|.+++ .+|...+.+. ..+..|.||+++.
T Consensus 302 y~td~~~~~V~~~~~~~G~~~~~i~-~~~~~p~gi~v~~ 339 (386)
T 3v65_B 302 YWTDWHTKSINSANKFTGKNQEIIR-NKLHFPMDIHTLH 339 (386)
T ss_dssp EEEETTTTEEEEEETTTCCSCEEEE-CSCSCCCCEEEES
T ss_pred EEeeCCCCeEEEEECCCCcceEEEc-cCCCCCceEEEEc
Confidence 99999999999999 6888887665 4688999999984
No 12
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=2.7e-37 Score=307.99 Aligned_cols=253 Identities=34% Similarity=0.606 Sum_probs=223.9
Q ss_pred CCCeEEEEEeCCcEEEEEcCCCCc--ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc
Q psy13635 39 VAAQMLLFATSKDIRIANLSRPLK--PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL 116 (357)
Q Consensus 39 ~~~~~l~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 116 (357)
+++++|+++.++.|++++++.... ..++++++..|.+|+||+.+++|||+|...+.|+|++++|+. .+.++..++
T Consensus 315 ~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~---~~~v~~~~~ 391 (619)
T 3s94_A 315 GATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSG---SQFVVTAQI 391 (619)
T ss_dssp SCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSC
T ss_pred CCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCc---cEEEEECCC
Confidence 368899999999999999987533 334457789999999999999999999999999999999975 356777888
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
..|.|||+||.+++|||+|...++|.+++++|+.++++... .+..|.+||+|+..|.|||||++
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~----------------~l~~P~~iavdp~~G~ly~tD~g 455 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISE----------------DLEEPRAIVLDPMVGYMYWTDWG 455 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT----------------TCCSEEEEEEETTTTEEEEEECS
T ss_pred CCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEEC----------------CCCCeeeEEEEcCCCcEEEecCC
Confidence 99999999999999999999999999999999988887643 45689999999999999999987
Q ss_pred C-CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCC
Q psy13635 197 T-DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDN 275 (357)
Q Consensus 197 ~-~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~ 275 (357)
. .+|+++++||+.+..+..+.+..|+||++|+.+++|||+|... ++|++++++|+.++++....+..|.||+++ +
T Consensus 456 ~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~--~~I~~~~~dG~~~~~~~~~~l~~P~glav~--~ 531 (619)
T 3s94_A 456 EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKT--DKIEVMNTDGTGRRVLVEDKIPHIFGFTLL--G 531 (619)
T ss_dssp SSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT--TEEEEEESSSCCCEEEEECCCCSSCCEEEE--T
T ss_pred CCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCC--CEEEEEecCCCceEEEeccCCCCcEEEEEE--C
Confidence 5 6999999999999888887899999999999899999999995 599999999999999988889999999995 6
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE
Q psy13635 276 EKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL 315 (357)
Q Consensus 276 ~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~ 315 (357)
++|||+|+.+++|+++++...+.+.+ .+++..|.+|.++
T Consensus 532 ~~ly~tD~~~~~I~~~~k~~g~~~~~-~~~~~~~~~i~~~ 570 (619)
T 3s94_A 532 DYVYWTDWQRRSIERVHKRSAEREVI-IDQLPDLMGLKAT 570 (619)
T ss_dssp TEEEEECTTSSCEEEEESSSCCEEEE-ECSCCCEEEEEEE
T ss_pred CEEEEeecCCCeEEEEEcCCCceEEE-ecCCCCCceeeec
Confidence 79999999999999999865555544 4578899999876
No 13
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=100.00 E-value=7.6e-34 Score=254.71 Aligned_cols=254 Identities=30% Similarity=0.591 Sum_probs=214.1
Q ss_pred CEEEEEeCCCCeEEEEEcCCCCcc--eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCC
Q psy13635 83 SMVCWTDHGTEMISCCTFDGNNVG--SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDID 160 (357)
Q Consensus 83 ~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~ 160 (357)
..|||++. +.|++++++|.... +...++......|+++++|+.+++|||+|..+++|.+++++|...+.+..
T Consensus 2 ~~l~~~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~---- 75 (267)
T 1npe_A 2 THLLFAQT--GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR---- 75 (267)
T ss_dssp EEEEEEEE--EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC----
T ss_pred cEEEEEcC--CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE----
Confidence 46888884 58999999987521 01234444456899999999899999999999999999999987665542
Q ss_pred CcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCC
Q psy13635 161 QPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNE 240 (357)
Q Consensus 161 ~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~ 240 (357)
.++..|.+|++|+.+++|||+|...++|.+++++|...+.+....+..|+++++||.+|+|||++...
T Consensus 76 ------------~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~ 143 (267)
T 1npe_A 76 ------------QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR 143 (267)
T ss_dssp ------------TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS
T ss_pred ------------CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC
Confidence 23458999999998999999999999999999999887777766778999999999889999999873
Q ss_pred CCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEE
Q psy13635 241 KRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVY 320 (357)
Q Consensus 241 ~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly 320 (357)
..++|++++++|...+.+....+..|+||++|+.+++|||+|...++|.+++++|..+..+.. .+.+|.||++++++||
T Consensus 144 ~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~~~P~gi~~d~~~ly 222 (267)
T 1npe_A 144 DNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-GLQYPFAVTSYGKNLY 222 (267)
T ss_dssp SSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE-CCCSEEEEEEETTEEE
T ss_pred CCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec-CCCCceEEEEeCCEEE
Confidence 226999999999888877767788999999998889999999999999999999987766654 6789999999999999
Q ss_pred EEeCCCCeEEEEeCccCceeEEEecc-cCCceeeee
Q psy13635 321 WTDWQRRSIDRVNKITGNDREVIIER-SCTGVTRRR 355 (357)
Q Consensus 321 ~td~~~~~I~~~~~~~g~~~~~i~~~-l~~p~~i~~ 355 (357)
|+++.+++|+++++.+|+..+.+..+ ...|.+|..
T Consensus 223 va~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~ 258 (267)
T 1npe_A 223 YTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITI 258 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEE
T ss_pred EEECCCCeEEEEeCCCCCceEEEccccccccceeee
Confidence 99999999999999889988888655 346888864
No 14
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=100.00 E-value=1.5e-32 Score=246.24 Aligned_cols=252 Identities=26% Similarity=0.469 Sum_probs=209.4
Q ss_pred CeEEEEEeCCcEEEEEcCCCCcc-----eEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC
Q psy13635 41 AQMLLFATSKDIRIANLSRPLKP-----VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 41 ~~~l~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
.|+|++++.+.|+++++++.... .........|.++++|+.++.|||+|...+.|++++++|.. ...++..+
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~~~~~~~ 77 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE---PTTIIRQD 77 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC---CEEEECTT
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC---cEEEEECC
Confidence 37899999999999999884321 22223356899999999999999999999999999999874 24455567
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
+..|.++++|+.+++|||+|...++|.+++++|...+.+... .+..|.++++|+.+++|||++.
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~----------------~~~~P~~i~vd~~~g~lyv~~~ 141 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT----------------GLVNPRGIVTDPVRGNLYWTDW 141 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----------------SCSSEEEEEEETTTTEEEEEEC
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC----------------CCCCccEEEEeeCCCEEEEEEC
Confidence 789999999998999999999999999999999877666532 3457999999988999999998
Q ss_pred C--CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEec
Q psy13635 196 G--TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDV 273 (357)
Q Consensus 196 ~--~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~ 273 (357)
. .++|++++++|+..+.+....+..|+||++|+.+++|||++... ++|.+++++|.....+.. .+..|.||++|
T Consensus 142 ~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~--~~I~~~~~~g~~~~~~~~-~~~~P~gi~~d- 217 (267)
T 1npe_A 142 NRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT--HRAECLNPAQPGRRKVLE-GLQYPFAVTSY- 217 (267)
T ss_dssp CSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTT--TEEEEEETTEEEEEEEEE-CCCSEEEEEEE-
T ss_pred CCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCC--CEEEEEecCCCceEEEec-CCCCceEEEEe-
Confidence 7 57999999999887777666778999999999889999999995 599999999887766664 57899999997
Q ss_pred CCCEEEEEeCCCCeEEEEeCC-CCCeEEEecCCCCceEEEEEEC
Q psy13635 274 DNEKLYWCDAKTDKIEMIDFD-GNNRRELINENLPHVFGISLLG 316 (357)
Q Consensus 274 ~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~~~~~~~p~gia~~~ 316 (357)
+++|||++..+++|.+++.+ |.....+.......|.||++..
T Consensus 218 -~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~ 260 (267)
T 1npe_A 218 -GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIAL 260 (267)
T ss_dssp -TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred -CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecC
Confidence 79999999999999999997 4445545433345799999874
No 15
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=7.8e-35 Score=294.38 Aligned_cols=250 Identities=31% Similarity=0.637 Sum_probs=215.6
Q ss_pred CEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC----ceEEEEecC
Q psy13635 83 SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK----KRKVLYWED 158 (357)
Q Consensus 83 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~----~~~~~~~~~ 158 (357)
..|++++. +.|+++++++.. ...+...+..|.+|++|+.++.|||+|...++|.+++++|. ....++
T Consensus 378 ~~ll~~~~--~~I~~id~~~~~----~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i--- 448 (699)
T 1n7d_A 378 AYLFFTNR--HEVRKMTLDRSE----YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI--- 448 (699)
T ss_dssp CCBCCCCT--TC-CEECTTSCC----EECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC---
T ss_pred eeEEecCc--cceEEEeCCCCc----ceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE---
Confidence 44555543 578899998875 55566678899999999999999999999999999999872 222221
Q ss_pred CCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeC
Q psy13635 159 IDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDW 238 (357)
Q Consensus 159 ~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~ 238 (357)
...+..|.||||||.+++|||+|...++|.+++++|..+++++...+..|++|++||..|+|||+++
T Consensus 449 -------------~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~ 515 (699)
T 1n7d_A 449 -------------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDW 515 (699)
T ss_dssp -------------CSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCC
T ss_pred -------------eCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEccc
Confidence 2345689999999999999999999999999999999988888777899999999999999999998
Q ss_pred CCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec--CCCCceEEEEEEC
Q psy13635 239 NEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN--ENLPHVFGISLLG 316 (357)
Q Consensus 239 ~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~--~~~~~p~gia~~~ 316 (357)
+.. ++|++++++|+.+++++...+.+|+||++|+.+++|||+|...++|++++++|..++.++. ..+.+|.||++++
T Consensus 516 ~~~-~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~ 594 (699)
T 1n7d_A 516 GTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE 594 (699)
T ss_dssp SSS-CCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET
T ss_pred CCC-CeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC
Confidence 753 6999999999998888877899999999999899999999999999999999998887775 3578999999999
Q ss_pred CEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 317 DYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 317 ~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
++|||+++.+++|.++++.+|+..+.|..++..|++|+-
T Consensus 595 ~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 595 DKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp TEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred CEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence 999999999999999999899999999888989998863
No 16
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=2.4e-34 Score=290.82 Aligned_cols=256 Identities=30% Similarity=0.510 Sum_probs=215.3
Q ss_pred CCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc-ceeEEEEeCCcC
Q psy13635 39 VAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV-GSKHNVITNGLI 117 (357)
Q Consensus 39 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~~~ 117 (357)
++.++|++++++.|+++++++ .....++..+..|.+|++++.++.|||+|...+.|++++++|... .....++..++.
T Consensus 375 ~~~~~ll~~~~~~I~~id~~~-~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~ 453 (699)
T 1n7d_A 375 GSIAYLFFTNRHEVRKMTLDR-SEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 453 (699)
T ss_dssp SSCCCBCCCCTTC-CEECTTS-CCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC-
T ss_pred ccceeEEecCccceEEEeCCC-CcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCC
Confidence 567899999999999999987 456667788899999999999999999999999999999997210 012344556788
Q ss_pred CceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 118 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
.|.|||+||.+++|||+|...++|.+++++|..+++++. ..+..|.|||+|+.+++|||++.+.
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~----------------~~~~~P~giavDp~~g~ly~td~~~ 517 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR----------------EQGSKPRAIVVDPVHGFMYWTDWGT 517 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECC----------------CSSCCCCCEECCSSSSCCEECCCSS
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEe----------------CCCCCcceEEEccCCCcEEEcccCC
Confidence 999999999999999999999999999999998777653 2345799999999999999999876
Q ss_pred -CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC--CCCCceEEEEecC
Q psy13635 198 -DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD--RLGWPNGITLDVD 274 (357)
Q Consensus 198 -~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~--~l~~P~giaid~~ 274 (357)
++|++++++|+.+++++...+..|+|||+|+.+++|||+|... .+|++++++|..+++++.. .+.+|.||++|
T Consensus 518 ~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~--~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd-- 593 (699)
T 1n7d_A 518 PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL--HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-- 593 (699)
T ss_dssp SCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTT--TEEEEECSSSSCCEEECCCSSSCSSCCCCEEE--
T ss_pred CCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCC--CeEEEEccCCCceEEEEecCCcCCCceEeEEE--
Confidence 7999999999988888777889999999999999999999884 5999999999988888753 47889999997
Q ss_pred CCEEEEEeCCCCeEEEEeC-CCCCeEEEecCCCCceEEEEEEC
Q psy13635 275 NEKLYWCDAKTDKIEMIDF-DGNNRRELINENLPHVFGISLLG 316 (357)
Q Consensus 275 ~~~lY~~d~~~~~I~~~~~-dG~~~~~i~~~~~~~p~gia~~~ 316 (357)
+++|||+|+.+++|.++++ +|...+. +...+.+|.+|+++.
T Consensus 594 ~~~lywtd~~~~~V~~~d~~~G~~~~~-i~~~~~~P~~i~v~~ 635 (699)
T 1n7d_A 594 EDKVFWTDIINEAIFSANRLTGSDVNL-LAENLLSPEDMVLFH 635 (699)
T ss_dssp TTEEEEECSTTTCEEEEETTTEEEEEC-CCTTCSSCCCCCBCS
T ss_pred CCEEEEEeCCCCeEEEEEccCCCceEE-eecCCCCCcEEEEeC
Confidence 5699999999999999997 4655544 444577899998864
No 17
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.97 E-value=3.3e-27 Score=217.09 Aligned_cols=225 Identities=22% Similarity=0.390 Sum_probs=186.2
Q ss_pred EEEeecCCCCeEEEEEe--CCcEEEEEcCCCCc-ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCccee
Q psy13635 32 WYALSHHVAAQMLLFAT--SKDIRIANLSRPLK-PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSK 108 (357)
Q Consensus 32 ~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~-~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 108 (357)
..++.-......||+++ .+.|++++++++.. ..+....+..|.++++|+.++.|||+|...+.|.+++++|.. .
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~ 113 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL---R 113 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---C
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---E
Confidence 44445554566788888 45699999988532 345567788999999999999999999999999999999985 2
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCC-CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA 187 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~ 187 (357)
..+...++..|.|||+|+.++.|||+|.+ .++|.+++++|+.++.++. .++..|+||++|+.+
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~----------------~~l~~Pnglavd~~~ 177 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN----------------SEIYWPNGLTLDYEE 177 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC----------------SSCSCEEEEEEETTT
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE----------------CCCCCccEEEEeccC
Confidence 44555788999999999999999999975 7899999999998877763 345689999999999
Q ss_pred CeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEec-CCCceEEEeeCCCCCc
Q psy13635 188 RNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLL-NGGERVLLVKDRLGWP 266 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~-dg~~~~~~~~~~l~~P 266 (357)
++|||+|...++|++++++|+.++++....+..|.||+++ .+.|||+|+.. ++|.+++. +|...+.+. ..+..|
T Consensus 178 ~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~~~--~~V~~~~~~~G~~~~~i~-~~~~~P 252 (318)
T 3sov_A 178 QKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWST--HSILACNKYTGEGLREIH-SDIFSP 252 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEETTT--TEEEEEETTTCCSCEEEE-CCCSSC
T ss_pred CEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEecCC--CeEEEEECCCCCceEEEe-CCCCCC
Confidence 9999999999999999999999888887778999999998 57999999985 59999999 566665554 667899
Q ss_pred eEEEEecCCCEEEE
Q psy13635 267 NGITLDVDNEKLYW 280 (357)
Q Consensus 267 ~giaid~~~~~lY~ 280 (357)
.+|++.......+.
T Consensus 253 ~~i~v~~~~~q~~~ 266 (318)
T 3sov_A 253 MDIHAFSQQRQPNA 266 (318)
T ss_dssp CCEEEECGGGSCCC
T ss_pred cEEEEecccccccc
Confidence 99998654444433
No 18
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.96 E-value=4.7e-27 Score=222.86 Aligned_cols=244 Identities=22% Similarity=0.367 Sum_probs=194.5
Q ss_pred EEEEEeceeEEEEE--------E--EEEEEEEeecCCCCeEEEEEe--CCcEEEEEcCCC----CcceEeccCCCcEEEE
Q psy13635 13 MMFITNTKWVNYIF--------L--VVHFWYALSHHVAAQMLLFAT--SKDIRIANLSRP----LKPVTIIKDLEEGAAI 76 (357)
Q Consensus 13 ~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~l~~~~--~~~i~~~~~~~~----~~~~~~~~~~~~~~~i 76 (357)
.++..|++.++.|- + -+.-..+++.......||+++ .+.|+++++++. ....++...+..|.|+
T Consensus 85 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 164 (400)
T 3p5b_L 85 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 164 (400)
T ss_dssp EEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEE
T ss_pred eeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccE
Confidence 45667777776661 1 122345666666667889987 456999999872 2344455588899999
Q ss_pred EEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC-CCEEEEEEcCCCceEEEE
Q psy13635 77 DYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVLY 155 (357)
Q Consensus 77 ~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~-~~~I~~~~~~g~~~~~~~ 155 (357)
++|+.++.|||+|...+.|.+++++|.. ...++..++..|.+||+|+.++.|||+|.+ .++|.+++++|+.++.++
T Consensus 165 avD~~~~~lY~~d~~~~~I~~~~~~g~~---~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 165 AVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCS---EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred EEEecCCceEEEECCCCeEEEEeCCCCc---eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 9999999999999999999999999985 355666788999999999999999999976 489999999999888876
Q ss_pred ecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC--CCCCceEEEEeCCCCEE
Q psy13635 156 WEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT--DLVEPRAITLSPAHGYL 233 (357)
Q Consensus 156 ~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~--~~~~P~giavd~~~g~L 233 (357)
. ..+..|+|||+|+.+++|||+|...++|++++++|..++++... .+.+|.||+++ +++|
T Consensus 242 ~----------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~l 303 (400)
T 3p5b_L 242 T----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKV 303 (400)
T ss_dssp C----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEE
T ss_pred E----------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEE
Confidence 3 34568999999999999999999999999999999988887763 47899999997 5899
Q ss_pred EEEeCCCCCCeEEEEe-cCCCceEEEeeCCCCCceEEEEecCCCEEEE
Q psy13635 234 FWSDWNEKRPKIERSL-LNGGERVLLVKDRLGWPNGITLDVDNEKLYW 280 (357)
Q Consensus 234 y~~d~~~~~~~I~~~~-~dg~~~~~~~~~~l~~P~giaid~~~~~lY~ 280 (357)
||+|+.. .+|.+++ .+|....++. ..+..|.+|++.......+.
T Consensus 304 ywtd~~~--~~V~~~~~~~G~~~~~i~-~~~~~p~~i~v~~~~~qp~~ 348 (400)
T 3p5b_L 304 FWTDIIN--EAIFSANRLTGSDVNLLA-ENLLSPEDMVLFHNLTQPRG 348 (400)
T ss_dssp EEEESSS--CSEEEEESSSCCCCEEEE-CSCSCEEEEEEESGGGSCCC
T ss_pred EEecCCC--CeEEEEEcCCCCceEEEe-cCCCCCceEEEEeeccCCCC
Confidence 9999985 5999999 6777766664 67889999998654444333
No 19
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.96 E-value=3.1e-27 Score=240.28 Aligned_cols=246 Identities=22% Similarity=0.367 Sum_probs=194.4
Q ss_pred EEEEEeceeEEEEEE----------EEEEEEEeecCCCCeEEEEEeC--CcEEEEEcCCC----CcceEeccCCCcEEEE
Q psy13635 13 MMFITNTKWVNYIFL----------VVHFWYALSHHVAAQMLLFATS--KDIRIANLSRP----LKPVTIIKDLEEGAAI 76 (357)
Q Consensus 13 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~--~~i~~~~~~~~----~~~~~~~~~~~~~~~i 76 (357)
+++.+|++.++.|.+ -+.-..+++.......||+++. +.|+++++++. ....++...+..|.||
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GL 476 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 476 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred ccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCccee
Confidence 456678877766522 1122456666666677888884 56999999873 2233444588999999
Q ss_pred EEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC-CEEEEEEcCCCceEEEE
Q psy13635 77 DYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET-NKLEVSSLDGKKRKVLY 155 (357)
Q Consensus 77 ~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~-~~I~~~~~~g~~~~~~~ 155 (357)
++|+.+++|||+|...++|++++++|.. ...++..++..|.||||||..+.|||+|.+. ++|.+++++|+.+++++
T Consensus 477 AvD~~~~~LY~tD~~~~~I~v~~ldG~~---~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 477 AVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSS---EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred eeeecCCcEEEEecCCCeEEEEeCCCCe---EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 9999999999999999999999999985 3556667889999999999999999999876 89999999999998887
Q ss_pred ecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC--CCCCceEEEEeCCCCEE
Q psy13635 156 WEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT--DLVEPRAITLSPAHGYL 233 (357)
Q Consensus 156 ~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~--~~~~P~giavd~~~g~L 233 (357)
.. .+.+|+|||||+.+++|||+|...++|++++++|..+++++.. .+.+|.+|+++ +++|
T Consensus 554 ~~----------------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~l 615 (791)
T 3m0c_C 554 TE----------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKV 615 (791)
T ss_dssp CS----------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEE
T ss_pred eC----------------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEE
Confidence 43 4568999999999999999999999999999999998888764 47789999997 5799
Q ss_pred EEEeCCCCCCeEEEEec-CCCceEEEeeCCCCCceEEEEecCCCEEEEEe
Q psy13635 234 FWSDWNEKRPKIERSLL-NGGERVLLVKDRLGWPNGITLDVDNEKLYWCD 282 (357)
Q Consensus 234 y~~d~~~~~~~I~~~~~-dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d 282 (357)
||+|+.. .+|++++. +|..+.++ ...+..|.+|++.......+..+
T Consensus 616 YwtD~~~--~~I~~~dk~tG~~~~~l-~~~l~~P~~i~v~h~~~Qp~~~N 662 (791)
T 3m0c_C 616 FWTDIIN--EAIFSANRLTGSDVNLL-AENLLSPEDMVLFHNLTQPRGVN 662 (791)
T ss_dssp EEEETTT--TEEEEEETTTCCCCEEE-ECSCSCCCCEEEESGGGSCCCCC
T ss_pred EEEECCC--CEEEEEeCCCCcceEEe-ecCCCCceeEeeeccccCCCCCC
Confidence 9999995 59999985 66666555 46788999999875443344333
No 20
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.96 E-value=1.6e-26 Score=212.49 Aligned_cols=219 Identities=22% Similarity=0.394 Sum_probs=177.7
Q ss_pred EEEeecCCCCeEEEEEe--CCcEEEEEcCC----CCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc
Q psy13635 32 WYALSHHVAAQMLLFAT--SKDIRIANLSR----PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV 105 (357)
Q Consensus 32 ~~~~~~~~~~~~l~~~~--~~~i~~~~~~~----~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 105 (357)
..+++.......|++++ .+.|.++++++ .....++...+..|.++++|+.++.|||+|...+.|.+++++|..
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~- 110 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK- 110 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc-
Confidence 34555555566788888 45799999986 222333335678999999999899999999999999999999875
Q ss_pred ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC-CEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEe
Q psy13635 106 GSKHNVITNGLITPDGLAIDWLTEKLYWTDSET-NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVD 184 (357)
Q Consensus 106 ~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~-~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD 184 (357)
...++..++..|.++++|+.++.|||+|.+. ++|.+++++|+..+.+.. ..+..|+||++|
T Consensus 111 --~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~----------------~~~~~P~gla~d 172 (316)
T 1ijq_A 111 --RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT----------------ENIQWPNGITLD 172 (316)
T ss_dssp --EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC----------------SSCSCEEEEEEE
T ss_pred --eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE----------------CCCCCceEEEEe
Confidence 2445556788999999999999999999876 899999999998877753 245689999999
Q ss_pred CCCCeEEEEeCCCCeEEEEEcCCCceEEEecC--CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEec-CCCceEEEeeC
Q psy13635 185 WVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT--DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLL-NGGERVLLVKD 261 (357)
Q Consensus 185 ~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~--~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~-dg~~~~~~~~~ 261 (357)
+.+++|||+|...++|++++++|+.++++... .+.+|.||+++ +++|||+|+.. ++|.+++. +|.....+. .
T Consensus 173 ~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~--~~V~~~~~~~g~~~~~i~-~ 247 (316)
T 1ijq_A 173 LLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIIN--EAIFSANRLTGSDVNLLA-E 247 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTT--TEEEEEETTTCCCCEEEE-C
T ss_pred ccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCC--CeEEEEeCCCCcceEEEe-c
Confidence 99999999999999999999999888887653 47899999998 48999999985 59999997 576666554 5
Q ss_pred CCCCceEEEEecC
Q psy13635 262 RLGWPNGITLDVD 274 (357)
Q Consensus 262 ~l~~P~giaid~~ 274 (357)
++..|.+|+++..
T Consensus 248 ~~~~p~~i~v~~~ 260 (316)
T 1ijq_A 248 NLLSPEDMVLFHN 260 (316)
T ss_dssp SCSCCCCEEEESG
T ss_pred CCCCceEEEEecc
Confidence 6888999998743
No 21
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.95 E-value=3.5e-25 Score=201.61 Aligned_cols=258 Identities=12% Similarity=0.211 Sum_probs=201.6
Q ss_pred CCeEEEEEe---CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC-------------CeEEEEEcCCC
Q psy13635 40 AAQMLLFAT---SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT-------------EMISCCTFDGN 103 (357)
Q Consensus 40 ~~~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~-------------~~I~~~~~~g~ 103 (357)
...+++|++ ...|.+++.+|+. .+.+... .+. .+.+.+++||+++... ..|++++++|+
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~--~~~--~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND--TAM--YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE--EEE--EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC--cee--eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 456788887 5679999999954 4444332 233 4466789999997653 57999999999
Q ss_pred CcceeEEEEeCCcCCceeEEEEcCCCeEEEEe---CCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCce
Q psy13635 104 NVGSKHNVITNGLITPDGLAIDWLTEKLYWTD---SETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDG 180 (357)
Q Consensus 104 ~~~~~~~~~~~~~~~p~glavd~~~~~ly~td---~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~g 180 (357)
. .+.+.... +.++.+.++.|||++ .+...|++++++|+..+.+.... .
T Consensus 99 ~----~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~------------------~--- 149 (302)
T 3s25_A 99 G----STVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY------------------L--- 149 (302)
T ss_dssp C----CEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC------------------C---
T ss_pred c----ceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC------------------c---
Confidence 6 55555443 234555699999999 67889999999999888776322 1
Q ss_pred EEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee
Q psy13635 181 VAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK 260 (357)
Q Consensus 181 lavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~ 260 (357)
+++||.++.|||++.+...|++++++|..++.+..+ +...+++|..+.|||+++... .+|++++++|+.++.+..
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~----~~~~~~~P~g~~iy~t~~~~~-~~I~~~~ldG~~~~~Lt~ 224 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC----NCYKPVVLDDTNVYYMDVNRD-NAIVHVNINNPNPVVLTE 224 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS----CEEEEEEEETTEEEEEEGGGT-TEEEEECSSSCCCEECSC
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC----CccceeeecCCEEEEEEcCCC-cEEEEEECCCCCeEEEeC
Confidence 346788999999999888999999999988877542 344567788999999999864 799999999999988875
Q ss_pred CCCCCceEEEEecCCCEEEEE-eCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCce
Q psy13635 261 DRLGWPNGITLDVDNEKLYWC-DAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 261 ~~l~~P~giaid~~~~~lY~~-d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~ 339 (357)
..+ | .+++.+++|||+ +...+.|+++++||+.++.+... ...+|++++++|||+|+..+.|++++. +|+.
T Consensus 225 ~~~--~---~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~---~~~~i~i~~d~Iy~td~~~~~i~~~~~-dGs~ 295 (302)
T 3s25_A 225 ANI--E---HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG---EFCNINVTSQYVYFTDFVSNKEYCTST-QNPD 295 (302)
T ss_dssp SCE--E---EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES---CEEEEEECSSEEEEEETTTCCEEEEES-SSCC
T ss_pred CCc--c---eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC---ccceEEEeCCEEEEEECCCCeEEEEEC-CCCC
Confidence 443 3 366789999997 56678999999999998888753 355899999999999999999999986 7887
Q ss_pred eEEEec
Q psy13635 340 REVIIE 345 (357)
Q Consensus 340 ~~~i~~ 345 (357)
.+.|.+
T Consensus 296 ~~~l~~ 301 (302)
T 3s25_A 296 TIKALQ 301 (302)
T ss_dssp SCEECC
T ss_pred ceEecC
Confidence 776653
No 22
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.95 E-value=1.6e-25 Score=214.22 Aligned_cols=240 Identities=13% Similarity=0.146 Sum_probs=184.2
Q ss_pred CCCcEEEEEEEc--cCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC----CEEE
Q psy13635 69 DLEEGAAIDYYY--KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET----NKLE 142 (357)
Q Consensus 69 ~~~~~~~i~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~----~~I~ 142 (357)
.+..|.+|++|+ .++.|||+|.. +.|+++++.+.. ...+...+..|.+|++|+.++ ||++|..+ ..+.
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~----v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQY----VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIY 210 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTE----EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEE
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCE----EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEE
Confidence 567899999998 47999999988 899999996553 555566888999999998655 99999753 2355
Q ss_pred EEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC-CCceEEEe-cCCCCC
Q psy13635 143 VSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE-GTHRKVLV-NTDLVE 220 (357)
Q Consensus 143 ~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~-g~~~~~~~-~~~~~~ 220 (357)
.+..++....... ...+..|.|+++|+.+++|||++...++|++++++ |.....+. ......
T Consensus 211 ~~~~~~~~~~~~~----------------~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~ 274 (433)
T 4hw6_A 211 LFTRASGFTERLS----------------LCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGS 274 (433)
T ss_dssp EECGGGTTCCEEE----------------EEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSS
T ss_pred EEECCCCeecccc----------------ccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCC
Confidence 5555444321100 11356899999998899999999999999999998 55423333 233456
Q ss_pred ceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCc-----eEEEeeC--------------CCCCceEEEE---------e
Q psy13635 221 PRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGE-----RVLLVKD--------------RLGWPNGITL---------D 272 (357)
Q Consensus 221 P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~-----~~~~~~~--------------~l~~P~giai---------d 272 (357)
|.+|+++|..++||++|... ++|++++.++.. ...+... .+..|.|+++ |
T Consensus 275 ~~~ia~dpdG~~LYvad~~~--~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGK--HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp CEEEEECTTSSEEEEEETTT--TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred cccEEEeCCCCEEEEEeCCC--CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 77899999877899999985 599999988532 1233322 3678999999 6
Q ss_pred cCCCEEEEEeCCCCeEEEEeCCCCCeEEEecC-----------------CCCceEEEEEE--CCEEEEEeCCCCeEEEEe
Q psy13635 273 VDNEKLYWCDAKTDKIEMIDFDGNNRRELINE-----------------NLPHVFGISLL--GDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 273 ~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~-----------------~~~~p~gia~~--~~~ly~td~~~~~I~~~~ 333 (357)
.+++|||+|..+++|++++.+|.-. .+... .+.+|.||+++ ++.||++|+.+++|++++
T Consensus 353 -~~g~lyvaD~~n~~I~~~~~~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 353 -DEYDFYFCDRDSHTVRVLTPEGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIA 430 (433)
T ss_dssp -CCEEEEEEETTTTEEEEECTTSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred -CCCcEEEEECCCCEEEEECCCCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEe
Confidence 7899999999999999999988433 33321 26789999999 699999999999999998
Q ss_pred C
Q psy13635 334 K 334 (357)
Q Consensus 334 ~ 334 (357)
+
T Consensus 431 ~ 431 (433)
T 4hw6_A 431 P 431 (433)
T ss_dssp E
T ss_pred c
Confidence 6
No 23
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=2.9e-25 Score=212.50 Aligned_cols=240 Identities=14% Similarity=0.200 Sum_probs=189.8
Q ss_pred CCCcEEEEEEEc-cCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCC----EEEE
Q psy13635 69 DLEEGAAIDYYY-KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETN----KLEV 143 (357)
Q Consensus 69 ~~~~~~~i~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~----~I~~ 143 (357)
.+..|.+|++|+ .++.||++|.. +.|+++++++.. ...+......|.+|++|+.++.||++|..++ .+..
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~----v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEY----VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTE----EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCE----EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 477899999998 68999999988 899999999874 4555567889999999987777999998543 5666
Q ss_pred EEcCCCce--EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec-CCCCC
Q psy13635 144 SSLDGKKR--KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN-TDLVE 220 (357)
Q Consensus 144 ~~~~g~~~--~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~-~~~~~ 220 (357)
+..+|... ..+ ..+..|.++++|+.+++|||+|...++|+++++++.....+.. .....
T Consensus 210 ~~~~g~~~~~~~l------------------~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~ 271 (430)
T 3tc9_A 210 LTRESGFKVITEL------------------TKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGW 271 (430)
T ss_dssp EEGGGTSCSEEEE------------------EECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSC
T ss_pred EeCCCceeeeeee------------------ccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCc
Confidence 77777654 222 1346899999998899999999999999999999876633332 33467
Q ss_pred ceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCc-----eEEEeeC--------------CCCCce-EEEEec-------
Q psy13635 221 PRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGE-----RVLLVKD--------------RLGWPN-GITLDV------- 273 (357)
Q Consensus 221 P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~-----~~~~~~~--------------~l~~P~-giaid~------- 273 (357)
|++|+++|...+|||++... ++|++++.++.. ...+... .+..|. |++++.
T Consensus 272 P~gia~~pdG~~lyv~d~~~--~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D 349 (430)
T 3tc9_A 272 EFHIQFHPSGNYAYIVVVNQ--HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSS 349 (430)
T ss_dssp CEEEEECTTSSEEEEEETTT--TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSS
T ss_pred ceeEEEcCCCCEEEEEECCC--CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccC
Confidence 99999999866799999985 599999998752 2223221 267899 899952
Q ss_pred CCCEEEEEeCCCCeEEEEeCCCCCeEEEecC-----------------CCCceEEEEEE--CCEEEEEeCCCCeEEEEeC
Q psy13635 274 DNEKLYWCDAKTDKIEMIDFDGNNRRELINE-----------------NLPHVFGISLL--GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 274 ~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~-----------------~~~~p~gia~~--~~~ly~td~~~~~I~~~~~ 334 (357)
.++.|||+|..+++|++++.+|.-.. +... ++.+|.||+++ ++.||++|..+++|+++++
T Consensus 350 ~~g~lyvaD~~n~~I~~i~~~G~v~~-~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 350 DEYDFYFCDRENHCIRILTPQGRVTT-FAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp CCEEEEEEEGGGTEEEEECTTSEEEE-EEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCeEEEEECCCcEEEEECCCCcEEE-EEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 46899999999999999998884333 3321 25689999999 4899999999999999986
No 24
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.94 E-value=7e-24 Score=201.68 Aligned_cols=242 Identities=14% Similarity=0.131 Sum_probs=187.5
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCC-EEEEEEcC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETN-KLEVSSLD 147 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~-~I~~~~~~ 147 (357)
.+..|.+|++|+ +++|||+|..++.|+++++++.. ...+......|. +++++.++.|||++...+ +|.+++.+
T Consensus 129 ~~~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~----~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 129 KFKYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNK----VTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCCCEEEEEECS-TTEEEEEETTTTEEEEEETTTTE----EEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred ccCCceEEEEeC-CCCEEEEecCCCcEEEEECCCCE----EEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 477899999995 67899999999999999998764 334444456678 999999999999998665 99999988
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEE----ecC-CCCCce
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVL----VNT-DLVEPR 222 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~----~~~-~~~~P~ 222 (357)
+.......... .......|.++++|+.++.||+++. .++|+++++++.....+ ... ....|.
T Consensus 203 ~~~~~~~~g~~------------~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~ 269 (409)
T 3hrp_A 203 SGWAPTRIGQL------------GSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPG 269 (409)
T ss_dssp GTTCEEEEEEC------------CTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSC
T ss_pred CCceeEEeeec------------cchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCcc
Confidence 76542222110 0223468999999988999999876 67999999987765554 211 123467
Q ss_pred -EEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC--------------CCCceEEEEecCCCEEEEEeC-CCC
Q psy13635 223 -AITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR--------------LGWPNGITLDVDNEKLYWCDA-KTD 286 (357)
Q Consensus 223 -giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~--------------l~~P~giaid~~~~~lY~~d~-~~~ 286 (357)
+|+++|.+++||++|... ++|++++.+|. ...+.... +..|.||++|+ +++||++|. .++
T Consensus 270 ~~ia~~p~~g~lyv~d~~~--~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~ 345 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQNL--SSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGY 345 (409)
T ss_dssp CEEEEETTTTEEEEEETTT--TEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTC
T ss_pred ccEEEeCCCCEEEEEeCCC--CEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCC
Confidence 999999789999999984 59999999987 33333332 67899999994 677999999 999
Q ss_pred eEEEEe-CCCCCeEEEecC--------------CCCceEEEEEEC-CEEEEEeCCCCeEEEEeC
Q psy13635 287 KIEMID-FDGNNRRELINE--------------NLPHVFGISLLG-DYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 287 ~I~~~~-~dG~~~~~i~~~--------------~~~~p~gia~~~-~~ly~td~~~~~I~~~~~ 334 (357)
+|++++ .+|. ...+... .+..|.||+++. +.||++|+.+++|+++..
T Consensus 346 ~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 346 CLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999999 5554 3334332 267899999994 999999999999999875
No 25
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=8.1e-23 Score=196.15 Aligned_cols=243 Identities=13% Similarity=0.142 Sum_probs=185.0
Q ss_pred CCCcEEEEEEEc-cCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC---CcCCceeEEE-------EcCCCeEEEEeCC
Q psy13635 69 DLEEGAAIDYYY-KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN---GLITPDGLAI-------DWLTEKLYWTDSE 137 (357)
Q Consensus 69 ~~~~~~~i~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~---~~~~p~glav-------d~~~~~ly~td~~ 137 (357)
.+..|.+|++|| .+++||+++...+.|+++++.+.. ..++... ++..|.+|++ |..++.||++|..
T Consensus 137 ~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~---v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 137 GFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM---LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp CCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE---EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECC
T ss_pred ccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE---EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCC
Confidence 466899999999 589999999988899999998874 2333333 3567999999 9877779999987
Q ss_pred CC------EEEEEEcC--CCceE----EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEc
Q psy13635 138 TN------KLEVSSLD--GKKRK----VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRL 205 (357)
Q Consensus 138 ~~------~I~~~~~~--g~~~~----~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~ 205 (357)
.+ .|.+++.+ |.... ..+ ..+.+|.|+++|+.++.||+++...++|+++++
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v-----------------~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~ 276 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLI-----------------AAYKQCNGATIHPINGELYFNSYEKGQVFRLDL 276 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEE-----------------EEESCCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred CCCcccCceEEEEecCCCCceeecccceee-----------------ccCCCceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence 62 36676433 34321 111 134589999999999999999999999999999
Q ss_pred C-------CCce------------EEEe-cCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce-----EEEee
Q psy13635 206 E-------GTHR------------KVLV-NTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER-----VLLVK 260 (357)
Q Consensus 206 ~-------g~~~------------~~~~-~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~-----~~~~~ 260 (357)
+ +... ..+. ......|.+|+++|....||++|+.. ++|++++.++... ..+..
T Consensus 277 ~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~--h~I~kid~dg~~~~~~~~~~~aG 354 (496)
T 3kya_A 277 VDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINN--HYFMRSDYDEIKKEFITPYNFVG 354 (496)
T ss_dssp HHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTT--TEEEEEEEETTTTEECCCEEEEE
T ss_pred ccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCC--CEEEEEecCCCcceecccEEecC
Confidence 7 3322 1222 23346799999999876799999985 5999999988642 23332
Q ss_pred --------------CCCCCce-EEEEec------CCCEEEEEeCCCCeEEEEeCCCCCeEEEecC---------------
Q psy13635 261 --------------DRLGWPN-GITLDV------DNEKLYWCDAKTDKIEMIDFDGNNRRELINE--------------- 304 (357)
Q Consensus 261 --------------~~l~~P~-giaid~------~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~--------------- 304 (357)
..|..|. |+++|. .++.||++|..+++|++++.+|. ...+...
T Consensus 355 ~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~ 433 (496)
T 3kya_A 355 GYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTD 433 (496)
T ss_dssp BTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCC
T ss_pred CCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCC-EEEEecccccccccCccccccC
Confidence 1467899 888873 57899999999999999999884 3334321
Q ss_pred --------CCCceEEEEEEC--CEEEEEeCCCCeEEEEeC
Q psy13635 305 --------NLPHVFGISLLG--DYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 305 --------~~~~p~gia~~~--~~ly~td~~~~~I~~~~~ 334 (357)
++.+|.||+++. +.||++|..+++|++++.
T Consensus 434 dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 434 DGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISM 473 (496)
T ss_dssp CEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEEC
Confidence 367899999994 899999999999999997
No 26
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.92 E-value=2.4e-23 Score=185.39 Aligned_cols=240 Identities=18% Similarity=0.254 Sum_probs=185.6
Q ss_pred cEEEEEEEccCCEEEE-EeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 72 EGAAIDYYYKKSMVCW-TDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~-~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
.|.++++++. ++||+ ++...+.|.+++.++.. .......++..|.++++|+ .++||+++. .++|.+++.++..
T Consensus 25 ~p~~i~~~~~-g~l~v~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSA-GNVYVTSEGMYGRVVKLATGSTG---TTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTT-CCEEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCC-CCEEEEccCCCCcEEEecCCCcc---cceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCce
Confidence 9999999974 56999 88888999999876653 1222234567899999997 567999998 8899999998876
Q ss_pred eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCC
Q psy13635 151 RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAH 230 (357)
Q Consensus 151 ~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~ 230 (357)
...+. ...+..|.++++|+ +++||+++...++|.+++.............+..|.+|++++.
T Consensus 99 ~~~~~----------------~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~- 160 (270)
T 1rwi_B 99 QTVLP----------------FDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNS- 160 (270)
T ss_dssp CEECC----------------CCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTT-
T ss_pred Eeeee----------------cCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCC-
Confidence 54432 22335799999996 6689999998889999965544333333345678999999984
Q ss_pred CEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceE
Q psy13635 231 GYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVF 310 (357)
Q Consensus 231 g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~ 310 (357)
|+||+++... +.|.+++.++..........+..|.+|++|+ +++||+++...++|.+++.+|.....+....+..|.
T Consensus 161 g~l~v~~~~~--~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~ 237 (270)
T 1rwi_B 161 GNVYVTDTDN--NRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPL 237 (270)
T ss_dssp CCEEEEEGGG--TEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEE
T ss_pred CCEEEEECCC--CEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCce
Confidence 7899999874 5999999998766555445668899999994 669999999999999999998766544434567899
Q ss_pred EEEEE-CCEEEEEeCCCCeEEEEeCccCc
Q psy13635 311 GISLL-GDYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 311 gia~~-~~~ly~td~~~~~I~~~~~~~g~ 338 (357)
+++++ +|.+|+++..+++|.++++...+
T Consensus 238 ~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 238 AVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred eEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 99998 57899999999999999985443
No 27
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.92 E-value=8.3e-23 Score=188.41 Aligned_cols=253 Identities=15% Similarity=0.081 Sum_probs=187.0
Q ss_pred ccCCCcEEEEEEEccCCEEEEEeCCC------------------------CeEEEEEcCCCCcceeEEEE-eCCcCCcee
Q psy13635 67 IKDLEEGAAIDYYYKKSMVCWTDHGT------------------------EMISCCTFDGNNVGSKHNVI-TNGLITPDG 121 (357)
Q Consensus 67 ~~~~~~~~~i~~d~~~~~ly~~d~~~------------------------~~I~~~~~~g~~~~~~~~~~-~~~~~~p~g 121 (357)
...+..+.+|++++ +++||+++..+ +.|+.++.+... ..... ...+..|.+
T Consensus 20 ~~~l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 20 YLLPGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE---ILQSSGKNLFYLPHG 95 (329)
T ss_dssp GCCCSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC---EEEEECTTTCSSEEE
T ss_pred ceecCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe---EEeccCCCccCCceE
Confidence 34678899999997 57899999877 368888886442 12222 245678999
Q ss_pred EEEEcCCCeEEEEeCCCCEEEEEEcCCCc--eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC-CCC
Q psy13635 122 LAIDWLTEKLYWTDSETNKLEVSSLDGKK--RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT-GTD 198 (357)
Q Consensus 122 lavd~~~~~ly~td~~~~~I~~~~~~g~~--~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~-~~~ 198 (357)
+++|+ .++||++|..+++|.+++.+|.. ...+...+.. +. ....+..|.+|++|+.+++||++|. ..+
T Consensus 96 ia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~---g~-----~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 96 LSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQP---GS-----DQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp EEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBC---CC-----STTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred EEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCC---CC-----CccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 99996 66799999999999999999873 3333211100 00 0235568999999987899999996 789
Q ss_pred eEEEEEcCCCceEEEec---------CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC-CCceEEEeeC-CCCCce
Q psy13635 199 RIEVCRLEGTHRKVLVN---------TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-GGERVLLVKD-RLGWPN 267 (357)
Q Consensus 199 ~I~~~~~~g~~~~~~~~---------~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-g~~~~~~~~~-~l~~P~ 267 (357)
+|.+++.+|.....+.. ..+..|.+|++||.+|+||+++... .+|.+.+.+ |.....+... ....|.
T Consensus 167 ~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~--~~I~~~~~~~G~~~~~~~~~~~~~~~~ 244 (329)
T 3fvz_A 167 RIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN--GRIQCFKTDTKEFVREIKHASFGRNVF 244 (329)
T ss_dssp EEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT--TEEEEEETTTCCEEEEECCTTTTTCEE
T ss_pred eEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC--CEEEEEECCCCcEEEEEeccccCCCcc
Confidence 99999999987776642 2345699999998779999999984 599999998 6655555322 223466
Q ss_pred EEEEec-----CCCEEEEEeCCCCeEEEEeCC-CCCeEEEe--cCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 268 GITLDV-----DNEKLYWCDAKTDKIEMIDFD-GNNRRELI--NENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 268 giaid~-----~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~--~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
++++.+ .++++|+++...++|..++.. |.....+. ...+..|.+|+++ +|.||++|..+++|++++.
T Consensus 245 ~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 245 AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 665553 244566666667799999964 44443332 2467889999998 5799999999999999987
No 28
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=3e-22 Score=191.53 Aligned_cols=241 Identities=13% Similarity=0.133 Sum_probs=183.2
Q ss_pred EEeecCC-CCeEEEEEeC-CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCC----eEEEEEcCCCCcc
Q psy13635 33 YALSHHV-AAQMLLFATS-KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTE----MISCCTFDGNNVG 106 (357)
Q Consensus 33 ~~~~~~~-~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~----~I~~~~~~g~~~~ 106 (357)
.+++.++ ....|++++. +.|+++|+++ .....+......|.+|++++.++.|||+|..++ .+..+..+|...
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~-~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~- 217 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEK-EYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK- 217 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTT-TEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC-
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCC-CEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee-
Confidence 3444554 3567888887 7899999977 455666678889999999998888999998544 467777777641
Q ss_pred eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 107 SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 107 ~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
....+. .+..|.++++|+.++.||++|..+++|.++++++.....+...+ ....|.+|++|+.
T Consensus 218 -~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~---------------~~~~P~gia~~pd 280 (430)
T 3tc9_A 218 -VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ---------------DSGWEFHIQFHPS 280 (430)
T ss_dssp -SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS---------------SSSCCEEEEECTT
T ss_pred -eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC---------------CCCcceeEEEcCC
Confidence 112332 47789999999889999999999999999999987654333221 2247999999988
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCc-----eEEEec--------------CCCCCce-EEEEeC-------CCCEEEEEeCC
Q psy13635 187 ARNLYWTDTGTDRIEVCRLEGTH-----RKVLVN--------------TDLVEPR-AITLSP-------AHGYLFWSDWN 239 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~g~~-----~~~~~~--------------~~~~~P~-giavd~-------~~g~Ly~~d~~ 239 (357)
++.|||++...++|.+++.++.. ...+.. ..+..|. +++++. ..|.||++|++
T Consensus 281 G~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~ 360 (430)
T 3tc9_A 281 GNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE 360 (430)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG
T ss_pred CCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC
Confidence 88899999999999999998742 122221 1267899 899963 35899999998
Q ss_pred CCCCeEEEEecCCCceEEEee---------C-------CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 240 EKRPKIERSLLNGGERVLLVK---------D-------RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 240 ~~~~~I~~~~~dg~~~~~~~~---------~-------~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
. ++|.+++.+|......-. . .+..|.||++|+.++.||++|..+++|++++++
T Consensus 361 n--~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 361 N--HCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp G--TEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred C--cEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 4 599999988743333321 1 166899999997689999999999999999875
No 29
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.91 E-value=9.6e-22 Score=188.08 Aligned_cols=239 Identities=10% Similarity=0.090 Sum_probs=178.3
Q ss_pred EEeecCC--CCeEEEEEeC-CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC----CeEEEEEcCCCCc
Q psy13635 33 YALSHHV--AAQMLLFATS-KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT----EMISCCTFDGNNV 105 (357)
Q Consensus 33 ~~~~~~~--~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~----~~I~~~~~~g~~~ 105 (357)
.+++..+ ....|++++. +.|+++++.+ .........+..|.+|++++.++ ||++|..+ ..+..+..++...
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~-g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVN-QYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTT-TEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTC
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCC-CEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCee
Confidence 3455554 2467888886 7899999955 45666677888999999999766 99999753 2366666665531
Q ss_pred ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCceEEEEecCCCCcceeeeeccCcccccCCceEEEe
Q psy13635 106 GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVD 184 (357)
Q Consensus 106 ~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD 184 (357)
....+. .+..|.++++|+.+++|||+|..+++|++++.+ |.....+...+ ....+.+|++|
T Consensus 220 --~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~---------------~~~~~~~ia~d 281 (433)
T 4hw6_A 220 --ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD---------------TKGSNFHIVWH 281 (433)
T ss_dssp --CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS---------------CCSSCEEEEEC
T ss_pred --cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC---------------CCCCcccEEEe
Confidence 122333 578999999998899999999999999999998 55424443222 11356789999
Q ss_pred CCCCeEEEEeCCCCeEEEEEcCCCc-----eEEEecC--------------CCCCceEEEE---------eCCCCEEEEE
Q psy13635 185 WVARNLYWTDTGTDRIEVCRLEGTH-----RKVLVNT--------------DLVEPRAITL---------SPAHGYLFWS 236 (357)
Q Consensus 185 ~~~~~lY~td~~~~~I~~~~~~g~~-----~~~~~~~--------------~~~~P~giav---------d~~~g~Ly~~ 236 (357)
+.++.|||+|...++|.++++++.. ...+... .+..|.++++ | ..|.||++
T Consensus 282 pdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyva 360 (433)
T 4hw6_A 282 PTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFC 360 (433)
T ss_dssp TTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEE
Confidence 8888899999999999999987531 1222221 3678999999 6 46999999
Q ss_pred eCCCCCCeEEEEecCCCceEEEee----------------CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 237 DWNEKRPKIERSLLNGGERVLLVK----------------DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 237 d~~~~~~~I~~~~~dg~~~~~~~~----------------~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
|+.. ++|.+++.+|......-. ..+.+|.||++|+.++.||++|..+++|++++++
T Consensus 361 D~~n--~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 361 DRDS--HTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ETTT--TEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ECCC--CEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 9994 599999998843332211 1267899999998899999999999999999864
No 30
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.91 E-value=5.4e-21 Score=172.16 Aligned_cols=258 Identities=17% Similarity=0.185 Sum_probs=198.2
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE-EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN-VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
....|.+|++++ ++.||+++...+.|.+++.++.. .. .+......|.++++|+ .+++|+++...++|.+++.+
T Consensus 18 ~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 18 PDSGPYGITSSE-DGKVWFTQHKANKISSLDQSGRI----KEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCE----EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT
T ss_pred CCCCcceeeECC-CCCEEEEcCCCCeEEEECCCCce----EEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC
Confidence 456899999997 57899999988999999988432 22 2234457899999994 77899999988999999998
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEe
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLS 227 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd 227 (357)
|....... ......|.++++|+ .++||+++...+.|.+++++|+............|.++++|
T Consensus 92 g~~~~~~~----------------~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 92 GGFTEYPL----------------PQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLG 154 (300)
T ss_dssp SCEEEEEC----------------SSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEEC
T ss_pred CCeEEecC----------------CCCCCCCccceECC-CCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEEC
Confidence 65432221 11224799999994 67899999988899999999765544444456789999999
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCC
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLP 307 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~ 307 (357)
+. |+||+++... +.|.+++.+|.............|.+|++| .+++||+++...+.|.+++.+|............
T Consensus 155 ~~-g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~ 230 (300)
T 2qc5_A 155 SD-NALWFTENQN--NSIGRITNTGKLEEYPLPTNAAAPVGITSG-NDGALWFVEIMGNKIGRITTTGEISEYDIPTPNA 230 (300)
T ss_dssp TT-SSEEEEETTT--TEEEEECTTCCEEEEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECTTCCEEEEECSSTTC
T ss_pred CC-CCEEEEecCC--CeEEEECCCCcEEEeeCCCCCCCcceEEEC-CCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCC
Confidence 75 7799999874 599999997765543333456789999999 4789999999999999999977655433444577
Q ss_pred ceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEE-ecccCCceeee
Q psy13635 308 HVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVI-IERSCTGVTRR 354 (357)
Q Consensus 308 ~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i-~~~l~~p~~i~ 354 (357)
.|.+|+++ +|.||+++...+.|.+++. +|+..... ..+...|.+|.
T Consensus 231 ~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~ 278 (300)
T 2qc5_A 231 RPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGIT 278 (300)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEE
T ss_pred CceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeE
Confidence 89999998 5889999998899999998 67665442 23456676664
No 31
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.91 E-value=7.1e-21 Score=171.40 Aligned_cols=272 Identities=15% Similarity=0.163 Sum_probs=202.8
Q ss_pred EEEeecCCCCeEEEEEeC--CcEEEEEcCCCCcceEec-cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCccee
Q psy13635 32 WYALSHHVAAQMLLFATS--KDIRIANLSRPLKPVTII-KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSK 108 (357)
Q Consensus 32 ~~~~~~~~~~~~l~~~~~--~~i~~~~~~~~~~~~~~~-~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 108 (357)
..+++..+.. .+++++. +.|.+++..+ ....... .....|.++++++ ++.||+++...+.|++++.+|..
T Consensus 22 p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~g~~---- 94 (300)
T 2qc5_A 22 PYGITSSEDG-KVWFTQHKANKISSLDQSG-RIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKKGGF---- 94 (300)
T ss_dssp EEEEEECTTS-CEEEEETTTTEEEEECTTS-CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCE----
T ss_pred cceeeECCCC-CEEEEcCCCCeEEEECCCC-ceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCCCCe----
Confidence 3455554433 3566653 6799999873 2222222 3457899999995 67899999988999999988542
Q ss_pred EEEE-eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC
Q psy13635 109 HNVI-TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA 187 (357)
Q Consensus 109 ~~~~-~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~ 187 (357)
.... ......|.++++|+ .++||+++...+.|.+++.+|....... ......|.++++|+ .
T Consensus 95 ~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~----------------~~~~~~~~~i~~d~-~ 156 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGTIYEYDL----------------PNKGSYPAFITLGS-D 156 (300)
T ss_dssp EEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTTSCEEEEEC----------------SSTTCCEEEEEECT-T
T ss_pred EEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCCCCEEEccC----------------CCCCCCceeEEECC-C
Confidence 2222 22447899999995 7889999998899999999865543321 12235799999995 5
Q ss_pred CeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCce
Q psy13635 188 RNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
++||+++...+.|.+++.+|+............|.++++|+ +|.||+++... +.|.+++.+|.............|.
T Consensus 157 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~~~~~ 233 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMG--NKIGRITTTGEISEYDIPTPNARPH 233 (300)
T ss_dssp SSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTT--TEEEEECTTCCEEEEECSSTTCCEE
T ss_pred CCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCC--CEEEEEcCCCcEEEEECCCCCCCce
Confidence 66999999888999999987766544444567899999997 58999999874 5899999976655443444578899
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
+|++| .+++||+++...+.|.+++.+|.............|.+|+++ +|.||+++. + .|.++++
T Consensus 234 ~i~~d-~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 234 AITAG-KNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp EEEEC-STTCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred EEEEC-CCCCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 99999 467899999988999999997754433233346789999998 589999998 5 9999876
No 32
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.91 E-value=5.4e-22 Score=180.58 Aligned_cols=210 Identities=12% Similarity=0.146 Sum_probs=162.4
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEe---CCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEE
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTD---HGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAID 125 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d---~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd 125 (357)
++.|++++++++. .+.+..... .++.+.+++|||++ .....|++++++|+. .+.+..... ++++
T Consensus 87 ~~~Iy~i~~dg~~-~~~l~~~~~----~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~----~~~lt~~~~----~~~~ 153 (302)
T 3s25_A 87 RNSLCRIKRNGHG-STVLDPDPC----IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE----KKKIKNHYL----FTCN 153 (302)
T ss_dssp SEEEEEEETTSCC-CEEEECSCE----EEEEEETTEEEEEEESSSSCEEEEEEETTSCC----CEEEESSCC----CCSE
T ss_pred CCeEEEEeCCCCc-ceEeecCCc----cEEEEeCCEEEEEeecCCCCceEEEEECCCCC----eEEEeCCCc----eEee
Confidence 3579999999954 555544432 24556789999999 567799999999986 444443322 4678
Q ss_pred cCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC-CeEEEEE
Q psy13635 126 WLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT-DRIEVCR 204 (357)
Q Consensus 126 ~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~-~~I~~~~ 204 (357)
|.+++|||++.+..+|.+++++|..++.+.. .+...+++|.++.|||++... .+|++++
T Consensus 154 ~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--------------------~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ 213 (302)
T 3s25_A 154 TSDRYFYYNNPKNGQLYRYDTASQSEALFYD--------------------CNCYKPVVLDDTNVYYMDVNRDNAIVHVN 213 (302)
T ss_dssp EETTEEEEECTTTCCEEEEETTTTEEEEEEC--------------------SCEEEEEEEETTEEEEEEGGGTTEEEEEC
T ss_pred EECCEEEEEeCCCceEEEEECCCCCEEEEeC--------------------CCccceeeecCCEEEEEEcCCCcEEEEEE
Confidence 8999999999988999999999998887742 122334567899999999865 4899999
Q ss_pred cCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCC
Q psy13635 205 LEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 205 ~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~ 284 (357)
++|+.++++..+.+ |. ++|.+++|||++.... ..|+++++||+.++.+.... ..+|+ +.++.|||+|..
T Consensus 214 ldG~~~~~Lt~~~~--~~---~~~~g~~Iy~~~~~~~-~~i~~~~~DG~~r~~l~~~~---~~~i~--i~~d~Iy~td~~ 282 (302)
T 3s25_A 214 INNPNPVVLTEANI--EH---YNVYGSLIFYQRGGDN-PALCVVKNDGTGFKELAKGE---FCNIN--VTSQYVYFTDFV 282 (302)
T ss_dssp SSSCCCEECSCSCE--EE---EEEETTEEEEEECSSS-CEEEEEETTSCCCEEEEESC---EEEEE--ECSSEEEEEETT
T ss_pred CCCCCeEEEeCCCc--ce---EEECCCEEEEEECCCC-cEEEEEECCCCccEEeeCCc---cceEE--EeCCEEEEEECC
Confidence 99999888775443 43 6777899999854433 69999999999998887542 33444 589999999999
Q ss_pred CCeEEEEeCCCCCeEEEe
Q psy13635 285 TDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 285 ~~~I~~~~~dG~~~~~i~ 302 (357)
.+.|+++++||+++..+.
T Consensus 283 ~~~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 283 SNKEYCTSTQNPDTIKAL 300 (302)
T ss_dssp TCCEEEEESSSCCSCEEC
T ss_pred CCeEEEEECCCCCceEec
Confidence 999999999999987665
No 33
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.90 E-value=4.5e-21 Score=182.30 Aligned_cols=241 Identities=13% Similarity=0.126 Sum_probs=178.2
Q ss_pred EEEeecCCCCeEEEEEeC--CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCC-eEEEEEcCCCCccee
Q psy13635 32 WYALSHHVAAQMLLFATS--KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTE-MISCCTFDGNNVGSK 108 (357)
Q Consensus 32 ~~~~~~~~~~~~l~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~-~I~~~~~~g~~~~~~ 108 (357)
..+++.++. ..|++++. +.|+++|+++ ............+. +++++.++.|||++...+ .|++++.++...
T Consensus 133 P~~la~d~~-g~lyv~d~~~~~I~~id~~~-g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~--- 206 (409)
T 3hrp_A 133 MWGIAAVGN-NTVLAYQRDDPRVRLISVDD-NKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA--- 206 (409)
T ss_dssp EEEEEECST-TEEEEEETTTTEEEEEETTT-TEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC---
T ss_pred ceEEEEeCC-CCEEEEecCCCcEEEEECCC-CEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce---
Confidence 445555533 34777775 6799999976 34444445566677 999999999999998665 999999987641
Q ss_pred EEEE----eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCc-eEEE
Q psy13635 109 HNVI----TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPD-GVAV 183 (357)
Q Consensus 109 ~~~~----~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~-glav 183 (357)
...+ ......|.++++|+.++.||+++. +++|.++++++.....+...... ......|. +|++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~-----------g~~~~~P~~~ia~ 274 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELS-----------GSLGTNPGPYLIY 274 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCC-----------SCCCCSSCCEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEeccccc-----------CCCCCCccccEEE
Confidence 2222 225678999999988999999876 78999999987765544222111 01112366 9999
Q ss_pred eCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC-------------CCCCceEEEEeCCCCEEEEEeC-CCCCCeEEEEe
Q psy13635 184 DWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT-------------DLVEPRAITLSPAHGYLFWSDW-NEKRPKIERSL 249 (357)
Q Consensus 184 D~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~-------------~~~~P~giavd~~~g~Ly~~d~-~~~~~~I~~~~ 249 (357)
|+.+++||++|...++|.+++++|......... .+..|.||++|+. |.||++|. .. ++|.+++
T Consensus 275 ~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~~--~~I~~~~ 351 (409)
T 3hrp_A 275 YFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFKG--YCLRKLD 351 (409)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTTT--CEEEEEE
T ss_pred eCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCCC--CEEEEEE
Confidence 988899999999999999999999844333221 1678999999986 78999999 74 5999999
Q ss_pred cCCCceEEEeeC--------------CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 250 LNGGERVLLVKD--------------RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 250 ~dg~~~~~~~~~--------------~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
+.......+... .+..|.||++|+ ++.||++|..+++|+++.++
T Consensus 352 ~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~-~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 352 ILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG-EGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS-SSEEEEEESTTCEEEEEEEC
T ss_pred CCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC-CCCEEEEECCCCeEEEEEeC
Confidence 443344444432 267899999995 49999999999999998753
No 34
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.90 E-value=3.5e-20 Score=166.74 Aligned_cols=276 Identities=16% Similarity=0.165 Sum_probs=200.4
Q ss_pred EEEeecCCCCeEEEEEeC--CcEEEEEcCCCCcceEec-cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCccee
Q psy13635 32 WYALSHHVAAQMLLFATS--KDIRIANLSRPLKPVTII-KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSK 108 (357)
Q Consensus 32 ~~~~~~~~~~~~l~~~~~--~~i~~~~~~~~~~~~~~~-~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 108 (357)
..+++..+... +++++. +.|.++|.++ ....... .....|.++++++ ++.+|+++...+.|++++.+|..
T Consensus 17 ~~~i~~d~~g~-l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~---- 89 (299)
T 2z2n_A 17 PYGITVSDKGK-VWITQHKANMISCINLDG-KITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKKGII---- 89 (299)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEECTTC-CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCE----
T ss_pred ccceEECCCCC-EEEEecCCCcEEEEcCCC-CeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCCCcE----
Confidence 34555554433 555653 5699999873 3222222 2457899999997 67899999888899999988652
Q ss_pred EEEE-eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC
Q psy13635 109 HNVI-TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA 187 (357)
Q Consensus 109 ~~~~-~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~ 187 (357)
.... ......|.++++|+ .++||+++...+.|.+++.+|....... ......|.++++|+ +
T Consensus 90 ~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~----------------~~~~~~~~~i~~~~-~ 151 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKIREYEL----------------PNKGSYPSFITLGS-D 151 (299)
T ss_dssp EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEEC----------------SSTTCCEEEEEECT-T
T ss_pred EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECCCCCEEEecC----------------CCCCCCCceEEEcC-C
Confidence 2222 23456899999996 6789999988899999999766543322 12234789999995 5
Q ss_pred CeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCce
Q psy13635 188 RNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
+++|+++...+.|.+++++|+............|.++++|+. |.||+++... +.|.+++.+|.............|.
T Consensus 152 g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~~~~~ 228 (299)
T 2z2n_A 152 NALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGND-DALWFVEIIG--NKIGRITTSGEITEFKIPTPNARPH 228 (299)
T ss_dssp SCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-SSEEEEETTT--TEEEEECTTCCEEEEECSSTTCCEE
T ss_pred CCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCC-CCEEEEccCC--ceEEEECCCCcEEEEECCCCCCCce
Confidence 699999988889999999766554434445678999999975 8899999874 5999999966533322333567899
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccC
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITG 337 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g 337 (357)
+|++| .+++||+++...+.|.+++++|.............|.++++.++.+|+++. .+.|.+++..++
T Consensus 229 ~i~~~-~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 229 AITAG-AGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICFDGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EEEEC-STTCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEECSSCEEEEET-TTEEEEEEEC--
T ss_pred eEEEC-CCCCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEecCCCEEEEec-CCcEEEEEcCcc
Confidence 99999 567899999888999999997643322233346789999995589999986 578999987443
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.90 E-value=1.5e-20 Score=169.14 Aligned_cols=240 Identities=14% Similarity=0.189 Sum_probs=188.8
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe------CCcCCceeEEEEcCCCeEEEEeCC-CCE
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT------NGLITPDGLAIDWLTEKLYWTDSE-TNK 140 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~------~~~~~p~glavd~~~~~ly~td~~-~~~ 140 (357)
..+..|.++++++ ++.||+++..++.|.+++.+|.. ...+. ..+..|.+++++..+++||+++.. +++
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~----~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRF----KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCE----EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCCCcE----EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 3567899999997 46799999999999999988653 22222 234689999997678999999975 789
Q ss_pred EEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec-CCCC
Q psy13635 141 LEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN-TDLV 219 (357)
Q Consensus 141 I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~-~~~~ 219 (357)
|.+++.+|.....+. ......|.++++|+ .++||+++...++|.+++.+|.....+.. ..+.
T Consensus 102 i~~~d~~g~~~~~~~----------------~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 102 IQIYNQYGQFVRKFG----------------ATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLE 164 (286)
T ss_dssp EEEECTTSCEEEEEC----------------TTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEEECTTTCS
T ss_pred EEEECCCCcEEEEec----------------CccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccC
Confidence 999998887655442 22335799999996 56899999988999999999887665543 3567
Q ss_pred CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-CCCCceEEEEecCCCEEEEEeCCCC-eEEEEeCCCCC
Q psy13635 220 EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-RLGWPNGITLDVDNEKLYWCDAKTD-KIEMIDFDGNN 297 (357)
Q Consensus 220 ~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-~l~~P~giaid~~~~~lY~~d~~~~-~I~~~~~dG~~ 297 (357)
.|.+|++|+. |+||+++... ..|.+.+.+|.....+... .+..|.+|++| .+++||+++...+ +|.+++.+|..
T Consensus 165 ~p~~i~~~~~-g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d-~~G~l~v~~~~~~~~i~~~~~~g~~ 240 (286)
T 1q7f_A 165 FPNGVVVNDK-QEIFISDNRA--HCVKVFNYEGQYLRQIGGEGITNYPIGVGIN-SNGEILIADNHNNFNLTIFTQDGQL 240 (286)
T ss_dssp SEEEEEECSS-SEEEEEEGGG--TEEEEEETTCCEEEEESCTTTSCSEEEEEEC-TTCCEEEEECSSSCEEEEECTTSCE
T ss_pred CcEEEEECCC-CCEEEEECCC--CEEEEEcCCCCEEEEEccCCccCCCcEEEEC-CCCCEEEEeCCCCEEEEEECCCCCE
Confidence 8999999985 8999999874 5999999988766555433 25789999999 4779999999886 99999999877
Q ss_pred eEEEecC-CCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 298 RRELINE-NLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 298 ~~~i~~~-~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
...+... ....|.+++++ +|.+|+++. .++|..++.
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 241 ISALESKVKHAQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp EEEEEESSCCSCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred EEEEcccCCCCcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 6655432 23469999998 589999985 678887775
No 36
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.89 E-value=1.9e-21 Score=178.73 Aligned_cols=244 Identities=15% Similarity=0.103 Sum_probs=182.8
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC-------------------CcCCceeEEEEcCCC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-------------------GLITPDGLAIDWLTE 129 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-------------------~~~~p~glavd~~~~ 129 (357)
.+..|.++++|+. +.++|++..++.|++++.++.. ....... ....|.||++|+.++
T Consensus 17 ~~~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 17 PSYAPNSFTFDST-NKGFYTSVQDGRVIKYEGPNSG---FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp SSSCCCCEECCTT-CSSEEEECTTSEEEEECCTTTC---EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred ccCCceEEEEcCC-CCEEEEEcCCCeEEEECCCCCc---eEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 4678999999974 7788899999999999888753 1222211 134799999997678
Q ss_pred eEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-------------
Q psy13635 130 KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG------------- 196 (357)
Q Consensus 130 ~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~------------- 196 (357)
+||++|.. +.|.+++.++...+.+.... ....+..|+++++|+..|+||+++..
T Consensus 93 ~l~v~d~~-~~i~~~d~~~g~~~~~~~~~------------~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 93 QLYIVDCY-YHLSVVGSEGGHATQLATSV------------DGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp EEEEEETT-TEEEEECTTCEECEEEESEE------------TTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred cEEEEECC-CCEEEEeCCCCEEEEecccC------------CCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 99999976 45888988865554443211 01234579999999647799999975
Q ss_pred ----CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC---ceEEEeeCCCCCceEE
Q psy13635 197 ----TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG---ERVLLVKDRLGWPNGI 269 (357)
Q Consensus 197 ----~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~---~~~~~~~~~l~~P~gi 269 (357)
.++|.++++++.....+. ..+..|+||++++.++.||+++... .+|.++++++. ..+.+.. +..|.||
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~--~~I~~~~~~~~~~~~~~~~~~--~~gP~gi 234 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLS--HQIVKYWLEGPKKGTAEVLVK--IPNPGNI 234 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGG--TEEEEEESSSTTTTCEEEEEE--CSSEEEE
T ss_pred ccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCC--CeEEEEECCCCcCCccceEEe--CCCCCCe
Confidence 257999998866555443 3567899999999867899999984 59999999863 2333332 2229999
Q ss_pred EEecCCCEEEEEeCC----------CCeEEEEeCCCCCeEEEecCC---CCceEEEEEECCEEEEEeCCCCeEEEEeCc
Q psy13635 270 TLDVDNEKLYWCDAK----------TDKIEMIDFDGNNRRELINEN---LPHVFGISLLGDYVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 270 aid~~~~~lY~~d~~----------~~~I~~~~~dG~~~~~i~~~~---~~~p~gia~~~~~ly~td~~~~~I~~~~~~ 335 (357)
++| .+|+||+++.. .++|.+++.+|.....+.... +..|.+++..++.||+++..++.|.+++..
T Consensus 235 ~~d-~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 235 KRN-ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEC-TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred EEC-CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 999 57789999976 578999999987666554332 567889988899999999999999999973
No 37
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.89 E-value=7.9e-20 Score=164.44 Aligned_cols=258 Identities=19% Similarity=0.218 Sum_probs=194.4
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE-eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI-TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
....|.++++|+ ++.||+++..++.|.+++.++.. .... ......|.++++|+ .+.+|+++...+.|.+++.+
T Consensus 13 ~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 13 QDTGPYGITVSD-KGKVWITQHKANMISCINLDGKI----TEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SSCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCE----EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT
T ss_pred cCCCccceEECC-CCCEEEEecCCCcEEEEcCCCCe----EEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC
Confidence 456899999997 57899999888899999988431 2222 23457899999995 77899999888999999988
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEe
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLS 227 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd 227 (357)
|....... ......|.++++|+ +++||+++...+.|.+++++|.............|.++++|
T Consensus 87 g~~~~~~~----------------~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 87 GIIKEYTL----------------PNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLG 149 (299)
T ss_dssp SCEEEEEC----------------SSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEEC
T ss_pred CcEEEEeC----------------CCcCCCceeeEECC-CCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEc
Confidence 66433221 11234799999995 67999999888899999997766554444456789999999
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCC
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLP 307 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~ 307 (357)
+. |+||+++... +.|.+++.+|.............|.++++| .+++||+++...+.|.+++.+|............
T Consensus 150 ~~-g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~ 225 (299)
T 2z2n_A 150 SD-NALWFTENQN--NAIGRITESGDITEFKIPTPASGPVGITKG-NDDALWFVEIIGNKIGRITTSGEITEFKIPTPNA 225 (299)
T ss_dssp TT-SCEEEEETTT--TEEEEECTTCCEEEEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECTTCCEEEEECSSTTC
T ss_pred CC-CCEEEEeCCC--CEEEEEcCCCcEEEeeCCCCCCcceeEEEC-CCCCEEEEccCCceEEEECCCCcEEEEECCCCCC
Confidence 75 8999999764 599999996554433234456789999999 4688999999889999999966543322333567
Q ss_pred ceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEE-ecccCCceeee
Q psy13635 308 HVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVI-IERSCTGVTRR 354 (357)
Q Consensus 308 ~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i-~~~l~~p~~i~ 354 (357)
.|.+|+++ +|.+|+++...+.|.++++ +|+..... ..+...|.++.
T Consensus 226 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~ 273 (299)
T 2z2n_A 226 RPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGIC 273 (299)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEE
T ss_pred CceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEE
Confidence 89999998 5899999988899999998 67654442 23455666654
No 38
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.88 E-value=1.4e-19 Score=166.84 Aligned_cols=234 Identities=14% Similarity=0.080 Sum_probs=172.8
Q ss_pred cEEEEEcCCCCcceEe-ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE---------eCCcCCce
Q psy13635 51 DIRIANLSRPLKPVTI-IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI---------TNGLITPD 120 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~-~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~---------~~~~~~p~ 120 (357)
.|.++|...+.-.... ...+..|.++++++ ++.||++|..++.|++++.+|... ....+ ...+..|.
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~--~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEG--PLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSC--CSEEESBTTBCCCSTTCCSSEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeE--EEEEecccCCCCCCccccCCCc
Confidence 3888998642322222 23567899999997 556999999999999999988730 12222 24466899
Q ss_pred eEEEEcCCCeEEEEeC-CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCe
Q psy13635 121 GLAIDWLTEKLYWTDS-ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDR 199 (357)
Q Consensus 121 glavd~~~~~ly~td~-~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~ 199 (357)
+|++|+.+++||++|. .+++|.+++.+|.....+...+..... ....+..|.||++|+.+++||+++...++
T Consensus 147 ~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~-------~~~~~~~p~gia~d~~~g~l~v~d~~~~~ 219 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSP-------RPGQFSVPHSLALVPHLDQLCVADRENGR 219 (329)
T ss_dssp EEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSC-------CTTEESCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCC-------CCcccCCCcEEEEECCCCEEEEEECCCCE
Confidence 9999987899999996 799999999999877666433321100 02356789999999887999999999999
Q ss_pred EEEEEcC-CCceEEEecC-CCCCceEEEEeCCCCEEEEEeCCCC-----CCeEEEEecCCCceEEEe---eCCCCCceEE
Q psy13635 200 IEVCRLE-GTHRKVLVNT-DLVEPRAITLSPAHGYLFWSDWNEK-----RPKIERSLLNGGERVLLV---KDRLGWPNGI 269 (357)
Q Consensus 200 I~~~~~~-g~~~~~~~~~-~~~~P~giavd~~~g~Ly~~d~~~~-----~~~I~~~~~dg~~~~~~~---~~~l~~P~gi 269 (357)
|.+++++ |+....+... ....|.++++.| |.+|.++.... ..+|...+.........+ ...+..|.+|
T Consensus 220 I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~i 297 (329)
T 3fvz_A 220 IQCFKTDTKEFVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDI 297 (329)
T ss_dssp EEEEETTTCCEEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEE
T ss_pred EEEEECCCCcEEEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEE
Confidence 9999998 8776666432 235688888887 66666653211 348888886655444444 2467889999
Q ss_pred EEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 270 TLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
++|+ +|.||++|..+++|++++++|..
T Consensus 298 a~~~-dG~lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 298 VASE-DGTVYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EECT-TSEEEEEESSSCCEEEEEEEECS
T ss_pred EECC-CCCEEEEECCCCEEEEEeCCccc
Confidence 9995 66999999999999999987743
No 39
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=6e-20 Score=176.26 Aligned_cols=247 Identities=12% Similarity=0.093 Sum_probs=178.8
Q ss_pred EEEeecCC-CCeEEEEEeC--CcEEEEEcCCCCcceEecc----CCCcEEEEEE-------EccCCEEEEEeCCCC----
Q psy13635 32 WYALSHHV-AAQMLLFATS--KDIRIANLSRPLKPVTIIK----DLEEGAAIDY-------YYKKSMVCWTDHGTE---- 93 (357)
Q Consensus 32 ~~~~~~~~-~~~~l~~~~~--~~i~~~~~~~~~~~~~~~~----~~~~~~~i~~-------d~~~~~ly~~d~~~~---- 93 (357)
..+++..+ .+..|+++.. +.|+++|+.+ .....+.. .+..|.+|++ +...+.||++|...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~-~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKN-RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTT-TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCC-CEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 34555554 3566777775 4699999976 33443332 3457999999 998888999999863
Q ss_pred --eEEEEEcCC--CCcc-eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-------CCce----------
Q psy13635 94 --MISCCTFDG--NNVG-SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-------GKKR---------- 151 (357)
Q Consensus 94 --~I~~~~~~g--~~~~-~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-------g~~~---------- 151 (357)
.|+.++.+. .-.. .....+. ....|.++++|+.++.||+++..+++|.+++++ +...
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 377775444 3200 0012333 467899999999899999999999999999987 3322
Q ss_pred --EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCce-----EEEec---------
Q psy13635 152 --KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHR-----KVLVN--------- 215 (357)
Q Consensus 152 --~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~-----~~~~~--------- 215 (357)
+.+... ....+|.+|++|+.++.||++|...++|+++++++... .++..
T Consensus 299 ~~~~l~~~---------------~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~D 363 (496)
T 3kya_A 299 TFKQLFTI---------------ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRD 363 (496)
T ss_dssp TEEEEEEC---------------SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBC
T ss_pred ccceeEec---------------CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccC
Confidence 122211 12247999999988888999999999999999887542 23322
Q ss_pred -----CCCCCce-EEEEeC------CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC----------------------
Q psy13635 216 -----TDLVEPR-AITLSP------AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD---------------------- 261 (357)
Q Consensus 216 -----~~~~~P~-giavd~------~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~---------------------- 261 (357)
..+..|. +++++. ..|.||++|+.. ++|.+++.+|. ..++...
T Consensus 364 G~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N--~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~ 440 (496)
T 3kya_A 364 DVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLN--FCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREV 440 (496)
T ss_dssp CBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGG--TEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTT
T ss_pred CcccccccCCCeEEEEEccccccccCCCeEEEEECCC--CEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhh
Confidence 1367899 888873 468999999994 59999998884 3344321
Q ss_pred -CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe
Q psy13635 262 -RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR 298 (357)
Q Consensus 262 -~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~ 298 (357)
.|..|.||++|+.++.||++|..+++|+++++++...
T Consensus 441 a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 441 ARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp CCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred hhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 2678999999965699999999999999999988643
No 40
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.87 E-value=2.5e-19 Score=161.02 Aligned_cols=225 Identities=15% Similarity=0.237 Sum_probs=175.8
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
..+..|.++++|+ .++||+++..+++|.+++.+|.....+...+.. ...+..|.+++++..+++||++
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~-----------~~~~~~p~~i~~~~~~g~l~v~ 94 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKR-----------DSQLLYPNRVAVVRNSGDIIVT 94 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCEEEEECCBSSS-----------TTCBSSEEEEEEETTTTEEEEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCCCcEEEEecccCCC-----------cccccCceEEEEEcCCCeEEEE
Confidence 3467899999996 578999999999999999998765544221110 2234579999997678999999
Q ss_pred eCC-CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee-CCCCCceEEEE
Q psy13635 194 DTG-TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-DRLGWPNGITL 271 (357)
Q Consensus 194 d~~-~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-~~l~~P~giai 271 (357)
+.. .++|.+.+.+|+....+.......|.+|++++. |+||+++... ++|.+.+.+|.....+.. ..+..|.+|++
T Consensus 95 ~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~ 171 (286)
T 1q7f_A 95 ERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNK-GRIIVVECKV--MRVIIFDQNGNVLHKFGCSKHLEFPNGVVV 171 (286)
T ss_dssp ECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTT-SCEEEEETTT--TEEEEECTTSCEEEEEECTTTCSSEEEEEE
T ss_pred cCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCC-CCEEEEECCC--CEEEEEcCCCCEEEEeCCCCccCCcEEEEE
Confidence 975 689999998888776665555678999999985 7899999874 599999998876555533 35678999999
Q ss_pred ecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecC-CCCceEEEEEE-CCEEEEEeCCCC-eEEEEeCccCceeEEEecccC
Q psy13635 272 DVDNEKLYWCDAKTDKIEMIDFDGNNRRELINE-NLPHVFGISLL-GDYVYWTDWQRR-SIDRVNKITGNDREVIIERSC 348 (357)
Q Consensus 272 d~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~-~~~~p~gia~~-~~~ly~td~~~~-~I~~~~~~~g~~~~~i~~~l~ 348 (357)
| .+++||+++...+.|.+++.+|.....+... .+..|.+|+++ +|.+|+++..++ +|.+++. +|+....+..+..
T Consensus 172 ~-~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~ 249 (286)
T 1q7f_A 172 N-DKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVK 249 (286)
T ss_dssp C-SSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSC
T ss_pred C-CCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCC
Confidence 9 4788999999999999999998766555432 35789999998 589999999886 9999997 7887777655433
Q ss_pred --Cceeeee
Q psy13635 349 --TGVTRRR 355 (357)
Q Consensus 349 --~p~~i~~ 355 (357)
.|.++..
T Consensus 250 ~~~~~~i~~ 258 (286)
T 1q7f_A 250 HAQCFDVAL 258 (286)
T ss_dssp CSCEEEEEE
T ss_pred CCcceeEEE
Confidence 3666643
No 41
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.86 E-value=3.4e-18 Score=157.52 Aligned_cols=278 Identities=12% Similarity=0.071 Sum_probs=200.0
Q ss_pred CcEEEEEcCCCCcceEec------cCC-CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeE
Q psy13635 50 KDIRIANLSRPLKPVTII------KDL-EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGL 122 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~------~~~-~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~gl 122 (357)
..|..+|.... +....+ ..+ ..|.++.++ ++++|++...++.|..++..... ....+ .....|.++
T Consensus 17 ~~l~~~d~~t~-~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~---~~~~i-~~~~~p~~i 89 (328)
T 3dsm_A 17 ATLSYYDPATC-EVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFK---EVGRI-TGFTSPRYI 89 (328)
T ss_dssp BEEEEEETTTT-EEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCC---EEEEE-ECCSSEEEE
T ss_pred ceEEEEECCCC-EEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccE---EEEEc-CCCCCCcEE
Confidence 46888998652 222211 112 357888886 69999999988999999998664 12333 346789999
Q ss_pred EEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-CCeEE
Q psy13635 123 AIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-TDRIE 201 (357)
Q Consensus 123 avd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-~~~I~ 201 (357)
++++ +++||+++...++|.++++........+..+.. ..+...|.+++++ +++||+++.+ .++|.
T Consensus 90 ~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~-----------~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~ 155 (328)
T 3dsm_A 90 HFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDM-----------DMESGSTEQMVQY--GKYVYVNCWSYQNRIL 155 (328)
T ss_dssp EEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC-----------CTTTCBCCCEEEE--TTEEEEEECTTCCEEE
T ss_pred EEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc-----------cccCCCcceEEEE--CCEEEEEcCCCCCEEE
Confidence 9975 469999997789999999876554333322210 1223479999995 8899999985 78999
Q ss_pred EEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC--------CCeEEEEecCCCceEEEeeC-CCCCceEEEEe
Q psy13635 202 VCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK--------RPKIERSLLNGGERVLLVKD-RLGWPNGITLD 272 (357)
Q Consensus 202 ~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~--------~~~I~~~~~dg~~~~~~~~~-~l~~P~giaid 272 (357)
++++........+.. ...|.++++++. |++|++..+.. ...|.+++.+.......+.. ....|.+|+++
T Consensus 156 viD~~t~~~~~~i~~-g~~p~~i~~~~d-G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 156 KIDTETDKVVDELTI-GIQPTSLVMDKY-NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp EEETTTTEEEEEEEC-SSCBCCCEECTT-SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC
T ss_pred EEECCCCeEEEEEEc-CCCccceEEcCC-CCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe
Confidence 999885443333332 357999999974 89999987740 15899999876554433332 23589999999
Q ss_pred cCCCEEEEEeCCCCeEEEEeCCCCCeE--EEecCCCCceEEEEEE--CCEEEEEe----CCCCeEEEEeCccCceeEEEe
Q psy13635 273 VDNEKLYWCDAKTDKIEMIDFDGNNRR--ELINENLPHVFGISLL--GDYVYWTD----WQRRSIDRVNKITGNDREVII 344 (357)
Q Consensus 273 ~~~~~lY~~d~~~~~I~~~~~dG~~~~--~i~~~~~~~p~gia~~--~~~ly~td----~~~~~I~~~~~~~g~~~~~i~ 344 (357)
+.+++||+++. .|++++.+..... .++......|.||+++ +++||+++ +.+++|.+++.. |+....+.
T Consensus 234 ~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 234 GTRDTLYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp TTSCEEEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred cCCCEEEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 88999999986 8999998654421 1222225689999997 68999999 788999999994 99888886
Q ss_pred cccCCceeeee
Q psy13635 345 ERSCTGVTRRR 355 (357)
Q Consensus 345 ~~l~~p~~i~~ 355 (357)
.+ ..|.++.+
T Consensus 310 ~G-~~P~~~~~ 319 (328)
T 3dsm_A 310 VG-IIPGAFCW 319 (328)
T ss_dssp EE-ESEEEEEE
T ss_pred ec-cCcceEEE
Confidence 54 57877765
No 42
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.86 E-value=6.4e-20 Score=163.16 Aligned_cols=239 Identities=22% Similarity=0.271 Sum_probs=175.6
Q ss_pred EEEEeecCCCCeEEEE-Ee--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcce
Q psy13635 31 FWYALSHHVAAQMLLF-AT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGS 107 (357)
Q Consensus 31 ~~~~~~~~~~~~~l~~-~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 107 (357)
...+++.++... +++ ++ .+.|.+++..+..........+..|.++++++. +.||+++. ++.|++++.++..
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~-~~~i~~~d~~~~~--- 98 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-GTVYVTDF-NNRVVTLAAGSNN--- 98 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTT-CCEEEEET-TTEEEEECTTCSC---
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCC-CCEEEEcC-CCEEEEEeCCCce---
Confidence 344555554433 666 53 457888987653222222345568999999984 56999998 7899999998874
Q ss_pred eEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC
Q psy13635 108 KHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA 187 (357)
Q Consensus 108 ~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~ 187 (357)
.......++..|.++++|+ .++||+++...++|.+++..+....... ...+..|.+|++|+ .
T Consensus 99 ~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~----------------~~~~~~p~~i~~~~-~ 160 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLP----------------FTGLNDPDGVAVDN-S 160 (270)
T ss_dssp CEECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECC----------------CCSCCSCCCEEECT-T
T ss_pred EeeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeec----------------cccCCCceeEEEeC-C
Confidence 1223334567899999997 6779999998899999965443332211 22345799999996 5
Q ss_pred CeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCce
Q psy13635 188 RNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
++||+++...++|.++++++..........+..|.+|++|+. |+||+++... ++|.+.+.++.........++..|.
T Consensus 161 g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~-g~l~v~~~~~--~~v~~~~~~~~~~~~~~~~~~~~p~ 237 (270)
T 1rwi_B 161 GNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEA-GTVYVTEHNT--NQVVKLLAGSTTSTVLPFTGLNTPL 237 (270)
T ss_dssp CCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTT-CCEEEEETTT--SCEEEECTTCSCCEECCCCSCSCEE
T ss_pred CCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCC-CCEEEEECCC--CcEEEEcCCCCcceeeccCCCCCce
Confidence 679999998889999999987665544445688999999975 7999999874 5999999998766554445567899
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
++++|+ +++||+++...++|..++++...
T Consensus 238 ~i~~~~-~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 238 AVAVDS-DRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEECT-TCCEEEEEGGGTEEEEECCCGGG
T ss_pred eEEECC-CCCEEEEECCCCEEEEEcCCCcc
Confidence 999994 56899999999999999876543
No 43
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.85 E-value=7e-19 Score=160.51 Aligned_cols=226 Identities=12% Similarity=0.032 Sum_probs=164.8
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC--CEEEEEEcCC
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET--NKLEVSSLDG 148 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~--~~I~~~~~~g 148 (357)
..|.++++++ +++|||+|..+++|++++.+|.. ...... -..|.++++|+ .++||+++... .+|.+++...
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~----~~~~~~-~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQ----QIHATV-EGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCE----EEEEEC-SSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCce----EEEEeC-CCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCC
Confidence 6799999998 57799999999999999998863 333332 35799999996 56799999654 4588887544
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEE----------ecCCC
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVL----------VNTDL 218 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~----------~~~~~ 218 (357)
...+.+.... ....|+|++++ .++++|+++...++|++++.++...++. ....+
T Consensus 105 g~~~~~~~~~---------------~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 105 GTVETLLTLP---------------DAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp SCEEEEEECT---------------TCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred CeEEEEEeCC---------------CccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence 3344333211 12357888875 6778999998888999999876422221 11346
Q ss_pred CCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC----ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 219 VEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG----ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 219 ~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~----~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
..|+|| ++.+++||+++... .+|.+++.++. ....+. .+..|.||++| .+|+||+++..+++|.+++.+
T Consensus 169 ~~pngi--s~dg~~lyv~d~~~--~~I~~~~~~~~g~~~~~~~~~--~~~~P~gi~vd-~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 169 PAANGL--KRFGNFLYVSNTEK--MLLLRIPVDSTDKPGEPEIFV--EQTNIDDFAFD-VEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp CSEEEE--EEETTEEEEEETTT--TEEEEEEBCTTSCBCCCEEEE--ESCCCSSEEEB-TTCCEEEECBTTCCEEEECTT
T ss_pred CcCCCc--CcCCCEEEEEeCCC--CEEEEEEeCCCCCCCccEEEe--ccCCCCCeEEC-CCCCEEEEeCCCCeEEEECCC
Confidence 689999 55568999999985 59999999852 123332 23689999999 578999999999999999998
Q ss_pred CCCeEEE-ecCCCCceEEEEEE-----CCEEEEEeCCC
Q psy13635 295 GNNRREL-INENLPHVFGISLL-----GDYVYWTDWQR 326 (357)
Q Consensus 295 G~~~~~i-~~~~~~~p~gia~~-----~~~ly~td~~~ 326 (357)
|...... +...+..|.++++. ++.||+++...
T Consensus 242 G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 242 RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 7643211 22346789999996 37999999753
No 44
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.84 E-value=3.3e-18 Score=155.74 Aligned_cols=245 Identities=16% Similarity=0.216 Sum_probs=181.9
Q ss_pred CcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCE
Q psy13635 61 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNK 140 (357)
Q Consensus 61 ~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~ 140 (357)
...+.+......+.+..+++.++.|||+|..++.|++++.+|. ..........|.++++|+ .++||+++...++
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-----~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-----VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRA 108 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-----EEEEEESCSCEEEEEECT-TSCEEEEETTTTE
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-----EEEEeCCCCccceeeECC-CCCEEEEECCCCE
Confidence 5677778888899999999988899999999999999998665 333444456799999996 6779999998899
Q ss_pred EEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-----------------CCeEEEE
Q psy13635 141 LEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-----------------TDRIEVC 203 (357)
Q Consensus 141 I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-----------------~~~I~~~ 203 (357)
|.+++.+|+... +.... ....++.|+++++|+ .|+||++|.. .+.|+++
T Consensus 109 v~~~~~~g~~~~-~~~~~------------~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 109 ITRSDADGQAHL-LVGRY------------AGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp EEEECTTSCEEE-EECEE------------TTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred EEEECCCCCEEE-EEecc------------CCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 999999876433 32111 022346799999995 6789998741 2579999
Q ss_pred EcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC---CCeEEEEecCCCc---eEEEeeCCCCCceEEEEecCCCE
Q psy13635 204 RLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK---RPKIERSLLNGGE---RVLLVKDRLGWPNGITLDVDNEK 277 (357)
Q Consensus 204 ~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~---~~~I~~~~~dg~~---~~~~~~~~l~~P~giaid~~~~~ 277 (357)
++++.....+. .+..|+|++++|.+..||+++.... ..+|++.+.++.. ...+.......|.||++| .+|+
T Consensus 175 d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d-~~G~ 251 (305)
T 3dr2_A 175 PPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVD-RGGW 251 (305)
T ss_dssp CSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEEC-TTSC
T ss_pred cCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEEC-CCCC
Confidence 98543333333 5678999999998778999998630 1489999887643 223333345679999999 6778
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEeC
Q psy13635 278 LYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 278 lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~ 334 (357)
||++. .+.|.+++++|.....+.... .|.++++. ++.||++.. +.+++++.
T Consensus 252 lwv~~--~~gv~~~~~~g~~~~~~~~~~--~~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 252 LWSSS--GTGVCVFDSDGQLLGHIPTPG--TASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp EEECC--SSEEEEECTTSCEEEEEECSS--CCCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred EEEec--CCcEEEECCCCCEEEEEECCC--ceeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 88887 457999999988766554322 58888884 568999874 57888764
No 45
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.84 E-value=1.2e-17 Score=151.07 Aligned_cols=246 Identities=15% Similarity=0.159 Sum_probs=183.6
Q ss_pred CcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCE
Q psy13635 61 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNK 140 (357)
Q Consensus 61 ~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~ 140 (357)
...+.+......+.++++++.++.|||++...+.|++++.++. ..........|.++++|+ .++||+++...+.
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-----LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRR 91 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-----EEEEESSCSSEEEEEECT-TCCEEEEETTTTE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-----eEEEECCCCCcceeeECC-CCcEEEEecCCCe
Confidence 4566777788899999999988889999999999999999876 233334556799999996 6779999988899
Q ss_pred EEEEEc-CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC-----------------CCCeEEE
Q psy13635 141 LEVSSL-DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT-----------------GTDRIEV 202 (357)
Q Consensus 141 I~~~~~-~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~-----------------~~~~I~~ 202 (357)
|.+++. +|... .+.... ....+..|+++++|+ .|+||++|. ..+.|++
T Consensus 92 i~~~d~~~g~~~-~~~~~~------------~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~ 157 (296)
T 3e5z_A 92 LERQREPGGEWE-SIADSF------------EGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFR 157 (296)
T ss_dssp EEEECSTTCCEE-EEECEE------------TTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred EEEEcCCCCcEE-EEeecc------------CCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEE
Confidence 999998 55543 332111 012345799999996 678999875 1358999
Q ss_pred EEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC--CCc---eEEEeeCCCCCceEEEEecCCCE
Q psy13635 203 CRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN--GGE---RVLLVKDRLGWPNGITLDVDNEK 277 (357)
Q Consensus 203 ~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d--g~~---~~~~~~~~l~~P~giaid~~~~~ 277 (357)
++.+|... .+ ...+..|++++++|.+..| |++... .+|++.+++ |.. ...+ ......|.+|++| .+|+
T Consensus 158 ~~~~g~~~-~~-~~~~~~~~gi~~s~dg~~l-v~~~~~--~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d-~~G~ 230 (296)
T 3e5z_A 158 LAPDGTLS-AP-IRDRVKPNGLAFLPSGNLL-VSDTGD--NATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVD-AGGL 230 (296)
T ss_dssp ECTTSCEE-EE-ECCCSSEEEEEECTTSCEE-EEETTT--TEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEB-TTSC
T ss_pred ECCCCCEE-Ee-ecCCCCCccEEECCCCCEE-EEeCCC--CeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEEC-CCCC
Confidence 99886543 33 3467889999999875566 999874 599999985 332 2333 4455679999999 5788
Q ss_pred EEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE---CCEEEEEeCCCCeEEEEeCccCce
Q psy13635 278 LYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL---GDYVYWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 278 lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~---~~~ly~td~~~~~I~~~~~~~g~~ 339 (357)
||++. .+.|.+++++|.....+.. ... |..+++. ++.||++.. +.+++++..+.+.
T Consensus 231 l~v~~--~~~v~~~~~~g~~~~~~~~-~~~-~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 231 IWASA--GDGVHVLTPDGDELGRVLT-PQT-TSNLCFGGPEGRTLYMTVS--TEFWSIETNVRGL 289 (296)
T ss_dssp EEEEE--TTEEEEECTTSCEEEEEEC-SSC-CCEEEEESTTSCEEEEEET--TEEEEEECSCCBC
T ss_pred EEEEc--CCeEEEECCCCCEEEEEEC-CCC-ceeEEEECCCCCEEEEEcC--CeEEEEEcccccc
Confidence 99999 7899999999876655543 233 8888885 257999874 5899999855543
No 46
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.83 E-value=3.4e-18 Score=159.26 Aligned_cols=253 Identities=15% Similarity=0.118 Sum_probs=179.1
Q ss_pred cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE---EEeCCcCCceeEEEEcC---CCeEEEEe
Q psy13635 62 KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN---VITNGLITPDGLAIDWL---TEKLYWTD 135 (357)
Q Consensus 62 ~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~---~~~~~~~~p~glavd~~---~~~ly~td 135 (357)
+.+.+...+..|.+|++++ +++||+++.. ++|++++.+|.. ... +...+...|.|||+++. ++.||+++
T Consensus 20 ~~~~va~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~~d~~G~~---~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 20 KISEVASDLEVPWSIAPLG-GGRYLVTERP-GRLVLISPSGKK---LVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp EEEEEECSCSCEEEEEEEE-TTEEEEEETT-TEEEEECSSCEE---EEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEEEeCCCCCCeEEEEcC-CCeEEEEeCC-CEEEEEeCCCce---EeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 4445566788999999998 6789999987 899999755430 111 12345678999999986 79999998
Q ss_pred CC---C----CEEEEEEcCCCc-----eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-------
Q psy13635 136 SE---T----NKLEVSSLDGKK-----RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG------- 196 (357)
Q Consensus 136 ~~---~----~~I~~~~~~g~~-----~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~------- 196 (357)
.. . ++|.+++.++.. .++++.. +|....+.|.+|++++ .|+||++...
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~------------~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~ 161 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDG------------IPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLA 161 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEE------------EECCSSCCCCCEEECT-TSCEEEECCCTTCGGGG
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEEc------------CCCCCCcCCceEEECC-CCcEEEEECCCCCCccc
Confidence 63 3 789999987751 2333221 0223456799999996 6689999642
Q ss_pred ------CCeEEEEEcCCC--------ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEecCCC--------
Q psy13635 197 ------TDRIEVCRLEGT--------HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK-RPKIERSLLNGG-------- 253 (357)
Q Consensus 197 ------~~~I~~~~~~g~--------~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~~dg~-------- 253 (357)
.++|.+++++|+ ..++. ..++..|.||++|+.+|.||++|.+.. ...|.++...+.
T Consensus 162 ~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~-a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g 240 (354)
T 3a9g_A 162 QDLSSLAGKILRVDEEGRPPADNPFPNSPIW-SYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATG 240 (354)
T ss_dssp TCTTCCSSEEEEECTTSCCCTTSSSTTCCEE-EECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCS
T ss_pred cCCCCCCeEEEEEcCCCCCCCCCCCCCCcEE-EEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccC
Confidence 258999999997 33444 347889999999997899999998853 123555543220
Q ss_pred ------ceEEEee--CCCCCceEEEE-------ecCCCEEEEEeCCCCeEEEEeCCCCC----eEEEecCCCCceEEEEE
Q psy13635 254 ------ERVLLVK--DRLGWPNGITL-------DVDNEKLYWCDAKTDKIEMIDFDGNN----RRELINENLPHVFGISL 314 (357)
Q Consensus 254 ------~~~~~~~--~~l~~P~giai-------d~~~~~lY~~d~~~~~I~~~~~dG~~----~~~i~~~~~~~p~gia~ 314 (357)
....+.. .....|.|+++ + ..+.+|+++...++|.++++++.. ...++......|.++++
T Consensus 241 ~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~-~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~ 319 (354)
T 3a9g_A 241 KAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPG-LRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVI 319 (354)
T ss_dssp CCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGG-GTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEE
T ss_pred CCCCCCCcCCEeecCCCCcCCcceEEECCCCCcc-cCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEE
Confidence 0011111 22346999999 4 578999999999999999998643 23444444678999999
Q ss_pred E-CCEEEEEeCC-CC---------eEEEEeC
Q psy13635 315 L-GDYVYWTDWQ-RR---------SIDRVNK 334 (357)
Q Consensus 315 ~-~~~ly~td~~-~~---------~I~~~~~ 334 (357)
+ +|.||++++. .+ +|+|+.+
T Consensus 320 ~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 320 DDDGGILISTSNRDGRGSLRAGDDKILKIVS 350 (354)
T ss_dssp CTTSCEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred CCCCcEEEEEeCCCCCcCCCCCCCEEEEEec
Confidence 8 5899999974 44 8999876
No 47
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.83 E-value=2.8e-18 Score=159.75 Aligned_cols=241 Identities=16% Similarity=0.160 Sum_probs=171.2
Q ss_pred cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE-----EeCCcCCceeEEEEcC---CCeEEE
Q psy13635 62 KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV-----ITNGLITPDGLAIDWL---TEKLYW 133 (357)
Q Consensus 62 ~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-----~~~~~~~p~glavd~~---~~~ly~ 133 (357)
+.+.+...+..|.+|++++ +++||+++.. +.|++++ +|.. ..+ ...+...|.|||+++. ++.||+
T Consensus 22 ~~~~va~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~i~-~g~~----~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv 94 (352)
T 2ism_A 22 RVEEVVGGLEVPWALAFLP-DGGMLIAERP-GRIRLFR-EGRL----STYAELSVYHRGESGLLGLALHPRFPQEPYVYA 94 (352)
T ss_dssp CEEEEECCCSCEEEEEECT-TSCEEEEETT-TEEEEEE-TTEE----EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred EEEEEECCCCCceEEEEcC-CCeEEEEeCC-CeEEEEE-CCCc----cEeecceEeecCCCCceeEEECCCCCCCCEEEE
Confidence 4555667788999999998 4679999987 8999998 6542 222 2345678999999986 689999
Q ss_pred EeCCC-----CEEEEEEcCCCc---eEEEEecCCCCcceeeeeccC--cccccCCceEEEeCCCCeEEEEeCC-------
Q psy13635 134 TDSET-----NKLEVSSLDGKK---RKVLYWEDIDQPRAIASYKLP--TIEVEHPDGVAVDWVARNLYWTDTG------- 196 (357)
Q Consensus 134 td~~~-----~~I~~~~~~g~~---~~~~~~~~~~~p~~i~~~~~~--~~~~~~p~glavD~~~~~lY~td~~------- 196 (357)
++... ++|.+++.++.. .+.++. ++ | ....+.|.+|++++ .|+||+++..
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~-~~-----------p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~ 161 (352)
T 2ism_A 95 YRTVAEGGLRNQVVRLRHLGERGVLDRVVLD-GI-----------PARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELA 161 (352)
T ss_dssp EEEECTTSSEEEEEEEEECSSCEEEEEEEEE-EE-----------CCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGG
T ss_pred EEecCCCCCccEEEEEEeCCCCcCceEEEEE-eC-----------CCCCCCCcCCceEEECC-CCCEEEEECCCCCCccc
Confidence 99754 789999988642 223322 11 2 23456789999996 5699999742
Q ss_pred ------CCeEEEEEcCCC-------------ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCC------CeEEEEecC
Q psy13635 197 ------TDRIEVCRLEGT-------------HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKR------PKIERSLLN 251 (357)
Q Consensus 197 ------~~~I~~~~~~g~-------------~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~------~~I~~~~~d 251 (357)
.++|.+++++|+ ..++.. .++..|.|+++||.+|.||++|.+... ..|.++...
T Consensus 162 ~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G 240 (352)
T 2ism_A 162 QDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYS-LGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPG 240 (352)
T ss_dssp GCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEE-ECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTT
T ss_pred cCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEE-EcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccC
Confidence 258999999983 233333 467889999999978999999988541 136655543
Q ss_pred CC---------------ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC-------eEEEecCCCCce
Q psy13635 252 GG---------------ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN-------RRELINENLPHV 309 (357)
Q Consensus 252 g~---------------~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~-------~~~i~~~~~~~p 309 (357)
+. ............|.|+++ .++.+|+++...++|.++++++.. ...++ .....|
T Consensus 241 ~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~--~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp 317 (352)
T 2ism_A 241 GNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF--FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRL 317 (352)
T ss_dssp CBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE--ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCE
T ss_pred CcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE--ECCEEEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCe
Confidence 20 000111122346899999 578999999999999999987543 23344 346789
Q ss_pred EEEEEE-CCEEEEEeCCC
Q psy13635 310 FGISLL-GDYVYWTDWQR 326 (357)
Q Consensus 310 ~gia~~-~~~ly~td~~~ 326 (357)
.+++++ +|.||++++..
T Consensus 318 ~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 318 REVQVGPDGALYVTTSNR 335 (352)
T ss_dssp EEEEECTTSCEEEEECST
T ss_pred eEEEECCCCcEEEEEeCC
Confidence 999998 58999999764
No 48
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=3.3e-16 Score=144.00 Aligned_cols=266 Identities=11% Similarity=0.085 Sum_probs=193.5
Q ss_pred cEEEEEEEccCCEEEEEeCC------CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEE
Q psy13635 72 EGAAIDYYYKKSMVCWTDHG------TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~ 145 (357)
.|.++++++.++.||+++.. ++.|+.++.++.. ....+.. -..|.++++++.++.+|+++...+.|.+++
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE---VTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC---EEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe---EEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 68899999999999999976 5689999988764 1222222 246999999998888999999899999999
Q ss_pred cCCCceEEEEecC-CCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC-CCCeEEEEEcCCCceEEEecCCCCCceE
Q psy13635 146 LDGKKRKVLYWED-IDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT-GTDRIEVCRLEGTHRKVLVNTDLVEPRA 223 (357)
Q Consensus 146 ~~g~~~~~~~~~~-~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~-~~~~I~~~~~~g~~~~~~~~~~~~~P~g 223 (357)
+........+..+ ...|.. .....|.++++++.++.+|+++. ..++|.+.++...............|.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEE--------VRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTG 189 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSS--------CCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCC
T ss_pred CCCCeeEEEEecCCCccccc--------cCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccce
Confidence 8755443322221 000000 00123788999999999999985 4568999998866554444323456999
Q ss_pred EEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC----CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeE
Q psy13635 224 ITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD----RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRR 299 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~----~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~ 299 (357)
++++|.+++||+++.. +.|...+............ ....|.++++++.++.||+++...+.|..++.......
T Consensus 190 ~~~s~dg~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 190 LALDSEGKRLYTTNAD---GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp CEEETTTTEEEEECTT---SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEcCC---CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 9999998899999874 5899999876655444433 23457889999988999999998899999998654443
Q ss_pred EEecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 300 ELINENLPHVFGISLL--GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 300 ~i~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
..+. ...|.++++. ++++|+++...+.|..++..+++....+..+ ..|.++..
T Consensus 267 ~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~ 321 (353)
T 3vgz_A 267 AKVA--APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLAL 321 (353)
T ss_dssp EEEE--CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEE
T ss_pred EEEE--cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEE
Confidence 3332 3456778886 4679999998999999999788877666543 35665543
No 49
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.81 E-value=7.3e-17 Score=146.31 Aligned_cols=232 Identities=13% Similarity=0.054 Sum_probs=171.5
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
.....+.+..+++.++.|||+|...+.|++++.++.. ...... -..|.++++++ .++||++. .+.|.+++.+
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~----~~~~~~-~~~~~~i~~~~-dG~l~v~~--~~~l~~~d~~ 81 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ----VQRVTM-DAPVSSVALRQ-SGGYVATI--GTKFCALNWK 81 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC----EEEEEC-SSCEEEEEEBT-TSSEEEEE--TTEEEEEETT
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCc----EEEEeC-CCceEEEEECC-CCCEEEEE--CCeEEEEECC
Confidence 4556788999999999999999999999999998764 333322 25799999996 55588876 5689999988
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-----------CCeEEEEEcCCCceEEEecC
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-----------TDRIEVCRLEGTHRKVLVNT 216 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-----------~~~I~~~~~~g~~~~~~~~~ 216 (357)
+...+.+..... ......|+++++|+ .|++|+++.. .+.|++++.+|+..... .
T Consensus 82 ~g~~~~~~~~~~------------~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~--~ 146 (297)
T 3g4e_A 82 EQSAVVLATVDN------------DKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF--D 146 (297)
T ss_dssp TTEEEEEEECCT------------TCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE--E
T ss_pred CCcEEEEEecCC------------CCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe--e
Confidence 665555543221 11234689999996 5679998742 34799999887654432 3
Q ss_pred CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC---CCc--eEEEee--CCCCCceEEEEecCCCEEEEEeCCCCeEE
Q psy13635 217 DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN---GGE--RVLLVK--DRLGWPNGITLDVDNEKLYWCDAKTDKIE 289 (357)
Q Consensus 217 ~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d---g~~--~~~~~~--~~l~~P~giaid~~~~~lY~~d~~~~~I~ 289 (357)
.+..|+|++++|.+..|||++... ++|++.+.+ |.. .+.+.. .....|.|+++| .+|+||++....++|.
T Consensus 147 ~~~~pngi~~spdg~~lyv~~~~~--~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d-~~G~lwva~~~~~~v~ 223 (297)
T 3g4e_A 147 QVDISNGLDWSLDHKIFYYIDSLS--YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID-AEGKLWVACYNGGRVI 223 (297)
T ss_dssp EESBEEEEEECTTSCEEEEEEGGG--TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB-TTSCEEEEEETTTEEE
T ss_pred ccccccceEEcCCCCEEEEecCCC--CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC-CCCCEEEEEcCCCEEE
Confidence 567899999999877899999884 599999874 321 223332 123579999999 5789999999889999
Q ss_pred EEeCC-CCCeEEEecCCCCceEEEEEEC---CEEEEEeCCC
Q psy13635 290 MIDFD-GNNRRELINENLPHVFGISLLG---DYVYWTDWQR 326 (357)
Q Consensus 290 ~~~~d-G~~~~~i~~~~~~~p~gia~~~---~~ly~td~~~ 326 (357)
+++++ |.....+. .....|.++++.+ +.||+|....
T Consensus 224 ~~d~~tG~~~~~i~-~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 224 RLDPVTGKRLQTVK-LPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EECTTTCCEEEEEE-CSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEcCCCceEEEEEE-CCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 99997 66555443 3446899999973 6899998653
No 50
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.81 E-value=3.7e-17 Score=150.55 Aligned_cols=240 Identities=13% Similarity=0.010 Sum_probs=174.8
Q ss_pred EEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc-----
Q psy13635 44 LLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL----- 116 (357)
Q Consensus 44 l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~----- 116 (357)
+++++ .+.|.++|.... +....++....|.++++++. +++|+++..++.|.++++.+.. ....+..+.
T Consensus 56 lyv~~~~~~~v~viD~~t~-~~~~~i~~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~---~~~~i~~g~~~~~~ 130 (328)
T 3dsm_A 56 GWIVVNNSHVIFAIDINTF-KEVGRITGFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTYE---ITGYIECPDMDMES 130 (328)
T ss_dssp EEEEEGGGTEEEEEETTTC-CEEEEEECCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTTE---EEEEEECTTCCTTT
T ss_pred EEEEEcCCCEEEEEECccc-EEEEEcCCCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCCe---EEEEEEcCCccccC
Confidence 55555 357999999763 33333356789999999865 5999999778899999988763 122233222
Q ss_pred CCceeEEEEcCCCeEEEEeCC-CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
..|.+++++ +++||+++.+ .++|.++++........+..+ ..|.++++|+ .|++|++..
T Consensus 131 ~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-----------------~~p~~i~~~~-dG~l~v~~~ 190 (328)
T 3dsm_A 131 GSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-----------------IQPTSLVMDK-YNKMWTITD 190 (328)
T ss_dssp CBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-----------------SCBCCCEECT-TSEEEEEBC
T ss_pred CCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-----------------CCccceEEcC-CCCEEEEEC
Confidence 279999995 8999999984 889999998755433222211 3689999995 678999988
Q ss_pred CC----------CeEEEEEcCCCceE-EEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceE--EEeeCC
Q psy13635 196 GT----------DRIEVCRLEGTHRK-VLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERV--LLVKDR 262 (357)
Q Consensus 196 ~~----------~~I~~~~~~g~~~~-~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~--~~~~~~ 262 (357)
+. +.|.++++...... .+.......|.+++++|.+++||+++. .|++++.+..... .++...
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-----~v~~~d~~t~~~~~~~~~~~~ 265 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-----DIWRMPVEADRVPVRPFLEFR 265 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-----SEEEEETTCSSCCSSCSBCCC
T ss_pred CCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-----EEEEEECCCCceeeeeeecCC
Confidence 75 78999998754433 332222358999999998899999864 6888888755432 112222
Q ss_pred CCCceEEEEecCCCEEEEEe----CCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE
Q psy13635 263 LGWPNGITLDVDNEKLYWCD----AKTDKIEMIDFDGNNRRELINENLPHVFGISLL 315 (357)
Q Consensus 263 l~~P~giaid~~~~~lY~~d----~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~ 315 (357)
...|.|+++|+.+++||+++ ...++|.+++.+|+....+- -...|.++++-
T Consensus 266 ~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~--~G~~P~~~~~~ 320 (328)
T 3dsm_A 266 DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFY--VGIIPGAFCWK 320 (328)
T ss_dssp SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEE--EEESEEEEEEE
T ss_pred CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEE--eccCcceEEEe
Confidence 46899999998899999999 78899999999987666553 25578887764
No 51
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.81 E-value=4.8e-18 Score=155.89 Aligned_cols=225 Identities=16% Similarity=0.160 Sum_probs=161.4
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCc----ce---eeeeccCcccccCCceEEEe
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQP----RA---IASYKLPTIEVEHPDGVAVD 184 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p----~~---i~~~~~~~~~~~~p~glavD 184 (357)
+...+..|+++++|+ .+++||++..+++|.+++.++...+.+........ .+ ... ......|.||++|
T Consensus 14 ~~g~~~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~p~gi~~~ 88 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEK----RPLCGRTYDISYN 88 (322)
T ss_dssp EECSSSCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGG----HHHHCCEEEEEEE
T ss_pred cCCccCCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhc----cccCCCCceEEEc
Confidence 334578999999996 57888889889999999988765544432110000 00 000 0123579999999
Q ss_pred CCCCeEEEEeCCCCeEEEEEcCCCceEEEec----CCCCCceEEEEeCCCCEEEEEeCCC---------------CCCeE
Q psy13635 185 WVARNLYWTDTGTDRIEVCRLEGTHRKVLVN----TDLVEPRAITLSPAHGYLFWSDWNE---------------KRPKI 245 (357)
Q Consensus 185 ~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~----~~~~~P~giavd~~~g~Ly~~d~~~---------------~~~~I 245 (357)
+.+++||+++.. +.|.++++++...+.+.. ..+..|+++++|+.+|+||+++... ..++|
T Consensus 89 ~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 89 LQNNQLYIVDCY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp TTTTEEEEEETT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred CCCCcEEEEECC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceE
Confidence 767899999986 458999988655444432 1346799999997358999999752 12579
Q ss_pred EEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC---CeEEEecCCCCceEEEEEE-CCEEEE
Q psy13635 246 ERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN---NRRELINENLPHVFGISLL-GDYVYW 321 (357)
Q Consensus 246 ~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~---~~~~i~~~~~~~p~gia~~-~~~ly~ 321 (357)
++.+.++.....+. ..+..|+||++++.++.||++|...++|+++++++. ..+.+.. +..|.||+++ +|.||+
T Consensus 168 ~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~gP~gi~~d~~G~l~v 244 (322)
T 2fp8_A 168 IKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPNPGNIKRNADGHFWV 244 (322)
T ss_dssp EEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSSEEEEEECTTSCEEE
T ss_pred EEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCCCCCeEECCCCCEEE
Confidence 99998766554443 456889999999777789999999999999999863 2333332 2239999999 588999
Q ss_pred EeCC----------CCeEEEEeCccCceeEEEecc
Q psy13635 322 TDWQ----------RRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 322 td~~----------~~~I~~~~~~~g~~~~~i~~~ 346 (357)
+++. .+.|.++++ +|+....+...
T Consensus 245 a~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~ 278 (322)
T 2fp8_A 245 SSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLP 278 (322)
T ss_dssp EEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECC
T ss_pred EecCcccccccCCCccEEEEECC-CCCEEEEEECC
Confidence 9976 578999998 68877776543
No 52
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.81 E-value=2e-17 Score=150.01 Aligned_cols=223 Identities=13% Similarity=0.138 Sum_probs=168.1
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
+.++..+..-++|++.|+.++.|||+|...++|.++++++...+.+... ..|.++++|+. +
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~------------------~~~~~i~~~~d-G 65 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMD------------------APVSSVALRQS-G 65 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECS------------------SCEEEEEEBTT-S
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCC------------------CceEEEEECCC-C
Confidence 4556677888999999998999999999999999999987765443211 26889999964 5
Q ss_pred eEEEEeCCCCeEEEEEcCCCceEEEecC----CCCCceEEEEeCCCCEEEEEeCCC---------CCCeEEEEecCCCce
Q psy13635 189 NLYWTDTGTDRIEVCRLEGTHRKVLVNT----DLVEPRAITLSPAHGYLFWSDWNE---------KRPKIERSLLNGGER 255 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g~~~~~~~~~----~~~~P~giavd~~~g~Ly~~d~~~---------~~~~I~~~~~dg~~~ 255 (357)
+||++. .+.|.++++++...+.+... ....|+++++|+. |++|+++... ..+.|++++.+|...
T Consensus 66 ~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 142 (297)
T 3g4e_A 66 GYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK 142 (297)
T ss_dssp SEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE
T ss_pred CEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCCEE
Confidence 588876 36899999886655554432 2356899999985 8899987431 125899999887543
Q ss_pred EEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC---CCC--eEEEec--CCCCceEEEEEE-CCEEEEEeCCCC
Q psy13635 256 VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD---GNN--RRELIN--ENLPHVFGISLL-GDYVYWTDWQRR 327 (357)
Q Consensus 256 ~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d---G~~--~~~i~~--~~~~~p~gia~~-~~~ly~td~~~~ 327 (357)
. +...+..|+|+++++++..|||++...++|++++.+ |.- .+.+.. .....|.|++++ +|+||++++..+
T Consensus 143 ~--~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~ 220 (297)
T 3g4e_A 143 K--YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG 220 (297)
T ss_dssp E--EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT
T ss_pred E--EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC
Confidence 3 234567899999998888899999999999999864 321 222322 123579999998 689999999999
Q ss_pred eEEEEeCccCceeEEEecccCCceeeee
Q psy13635 328 SIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 328 ~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
+|.++++.+|+....+..+...|..+.+
T Consensus 221 ~v~~~d~~tG~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 221 RVIRLDPVTGKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp EEEEECTTTCCEEEEEECSSSBEEEEEE
T ss_pred EEEEEcCCCceEEEEEECCCCCceEEEE
Confidence 9999999779988888766666665543
No 53
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.80 E-value=6.1e-18 Score=154.22 Aligned_cols=211 Identities=12% Similarity=0.054 Sum_probs=155.1
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
..|+++++|+ +++|||+|..+++|++++.+|.....+. .+ ..|.||++|+ .++||+++..
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~-----------------~~p~gia~~~-dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQIHAT-VE-----------------GKVSGLAFTS-NGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEEE-CS-----------------SEEEEEEECT-TSCEEEEEEC
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceEEEEe-CC-----------------CCceeEEEcC-CCcEEEEecc
Confidence 6799999997 6789999999999999999986544332 11 2699999995 4679999976
Q ss_pred CC--eEEEEEcCCCceEEEec-CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEE----------eeCCC
Q psy13635 197 TD--RIEVCRLEGTHRKVLVN-TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLL----------VKDRL 263 (357)
Q Consensus 197 ~~--~I~~~~~~g~~~~~~~~-~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~----------~~~~l 263 (357)
.+ +|.+++......+.+.. .....|.|+++.+ .+.+|++|... ++|++++.++...... ....+
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~--g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYR--GAIWLIDVVQPSGSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTT--TEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred CCcceEEEEcCCCCeEEEEEeCCCccccCcccccC-CCcEEEEECCC--CeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence 44 58888754333333332 3456789999875 58999999863 6999999876432221 11346
Q ss_pred CCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC----CeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCc
Q psy13635 264 GWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN----NRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 264 ~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~----~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~ 338 (357)
..|+|| ++.+++||++|..+++|++++.++. ..+.+. .+..|.||+++ +|++|++++.+++|.++++ +|+
T Consensus 169 ~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~--~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~-~G~ 243 (306)
T 2p4o_A 169 PAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV--EQTNIDDFAFDVEGNLYGATHIYNSVVRIAP-DRS 243 (306)
T ss_dssp CSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE--ESCCCSSEEEBTTCCEEEECBTTCCEEEECT-TCC
T ss_pred CcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe--ccCCCCCeEECCCCCEEEEeCCCCeEEEECC-CCC
Confidence 789999 4567899999999999999998752 122222 24689999999 6899999999999999998 577
Q ss_pred eeEE--EecccCCceeeee
Q psy13635 339 DREV--IIERSCTGVTRRR 355 (357)
Q Consensus 339 ~~~~--i~~~l~~p~~i~~ 355 (357)
...+ +..++..|..+..
T Consensus 244 ~~~~~~~~~~~~~p~~~a~ 262 (306)
T 2p4o_A 244 TTIIAQAEQGVIGSTAVAF 262 (306)
T ss_dssp EEEEECGGGTCTTEEEEEE
T ss_pred EEEEeecccccCCceEEEE
Confidence 6443 3345567777654
No 54
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.79 E-value=8.4e-17 Score=145.96 Aligned_cols=248 Identities=15% Similarity=0.157 Sum_probs=178.3
Q ss_pred cceEeccCCCcEEEEEEEccCCEEEEE-------eCCCCeEEEEEcCCCCcceeEEEEeC-----CcCCceeEEEEcCCC
Q psy13635 62 KPVTIIKDLEEGAAIDYYYKKSMVCWT-------DHGTEMISCCTFDGNNVGSKHNVITN-----GLITPDGLAIDWLTE 129 (357)
Q Consensus 62 ~~~~~~~~~~~~~~i~~d~~~~~ly~~-------d~~~~~I~~~~~~g~~~~~~~~~~~~-----~~~~p~glavd~~~~ 129 (357)
....+...+..|.+++++ .++.||++ +...+.|++++..+.. ...+.. ....|.++++|+.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~----~~~~~~~~~~~~~~~~~~i~~~~~~g 83 (314)
T 1pjx_A 9 LFTKVTEDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGK----KTVICKPEVNGYGGIPAGCQCDRDAN 83 (314)
T ss_dssp CCEEEECCCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCC----EEEEECCEETTEECCEEEEEECSSSS
T ss_pred hHhhhhccCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCc----EEEEEecccCCCCCCCceEEEecCCC
Confidence 345557778899999999 47789999 7777899999976553 222222 235799999997548
Q ss_pred eEEEEeCCCCEEEEEEcCCCceEEE-EecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC-----------
Q psy13635 130 KLYWTDSETNKLEVSSLDGKKRKVL-YWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT----------- 197 (357)
Q Consensus 130 ~ly~td~~~~~I~~~~~~g~~~~~~-~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~----------- 197 (357)
+||+++... .|.+++.+|.. ..+ .... . ......|.++++|+ .+++|+++...
T Consensus 84 ~l~v~~~~~-~l~~~d~~g~~-~~~~~~~~-~-----------~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 84 QLFVADMRL-GLLVVQTDGTF-EEIAKKDS-E-----------GRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp EEEEEETTT-EEEEEETTSCE-EECCSBCT-T-----------SCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTT
T ss_pred cEEEEECCC-CEEEEeCCCCE-EEEEeccC-C-----------CccccCCcCEEECC-CCCEEEEecCcccccccccccc
Confidence 999998744 89999988543 222 1110 0 11234799999996 57899998765
Q ss_pred ----CeEEEEEcCCCceEEEecCCCCCceEEEEe----CCCCEEEEEeCCCCCCeEEEEecCCCce----EEEee--CCC
Q psy13635 198 ----DRIEVCRLEGTHRKVLVNTDLVEPRAITLS----PAHGYLFWSDWNEKRPKIERSLLNGGER----VLLVK--DRL 263 (357)
Q Consensus 198 ----~~I~~~~~~g~~~~~~~~~~~~~P~giavd----~~~g~Ly~~d~~~~~~~I~~~~~dg~~~----~~~~~--~~l 263 (357)
+.|.+++++|+.... . .....|.+++++ +.++.||+++... ++|.+.+.++... ..+.. ...
T Consensus 149 ~~~~~~l~~~~~~g~~~~~-~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~--~~i~~~~~~~~g~~~~~~~~~~~~~~~ 224 (314)
T 1pjx_A 149 QEKFGSIYCFTTDGQMIQV-D-TAFQFPNGIAVRHMNDGRPYQLIVAETPT--KKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp SSSCEEEEEECTTSCEEEE-E-EEESSEEEEEEEECTTSCEEEEEEEETTT--TEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred cCCCCeEEEECCCCCEEEe-c-cCCCCcceEEEecccCCCCCEEEEEECCC--CeEEEEECCCCCccccceEEEECCCCC
Confidence 589999988654332 2 245679999999 8755899999874 5999998762211 12221 122
Q ss_pred -CCceEEEEecCCCEEEEEeCCCCeEEEEeCC-CCCeEEEecCCCCceEEEEEE-CC-EEEEEeCCCCeEEEEeCc
Q psy13635 264 -GWPNGITLDVDNEKLYWCDAKTDKIEMIDFD-GNNRRELINENLPHVFGISLL-GD-YVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 264 -~~P~giaid~~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~~~~~~~p~gia~~-~~-~ly~td~~~~~I~~~~~~ 335 (357)
..|.++++| .+++||+++...+.|.+++++ |.....+. .....|.+++++ ++ .||+++...+.|++++..
T Consensus 225 ~~~p~~i~~d-~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 225 EGGADGMDFD-EDNNLLVANWGSSHIEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp SCEEEEEEEB-TTCCEEEEEETTTEEEEECTTCBSCSEEEE-CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCCceEEC-CCCCEEEEEcCCCEEEEEcCCCCcEeEEEe-CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 579999999 578999999888999999998 66554443 234689999996 34 599999888999999874
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=4.7e-15 Score=136.21 Aligned_cols=263 Identities=13% Similarity=0.072 Sum_probs=189.8
Q ss_pred cCCCCeEEEEEe--------CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCccee
Q psy13635 37 HHVAAQMLLFAT--------SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSK 108 (357)
Q Consensus 37 ~~~~~~~l~~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 108 (357)
.++....+++++ ...|..+|+.+. +.....+....|.++++++.++.+|+++..++.|..++..+.. .
T Consensus 48 ~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---~ 123 (353)
T 3vgz_A 48 YSQQENALWLATSQSRKLDKGGVVYRLDPVTL-EVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE---V 123 (353)
T ss_dssp EETTTTEEEEEECCCTTTEESEEEEEECTTTC-CEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCC---E
T ss_pred ECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC-eEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCe---e
Confidence 344445677777 346889998763 3333334445688999999888999999998999999998664 1
Q ss_pred EEEEeCC-cC--------CceeEEEEcCCCeEEEEe-CCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCC
Q psy13635 109 HNVITNG-LI--------TPDGLAIDWLTEKLYWTD-SETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHP 178 (357)
Q Consensus 109 ~~~~~~~-~~--------~p~glavd~~~~~ly~td-~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p 178 (357)
...+..+ .. .|.++++++.++.+|+++ ...++|.++++........... ....|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~----------------~~~~~ 187 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN----------------TGKMS 187 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC----------------CCTTC
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC----------------CCCcc
Confidence 2223221 11 278999999889999998 4578899999876554333320 11358
Q ss_pred ceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC----CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCc
Q psy13635 179 DGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT----DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGE 254 (357)
Q Consensus 179 ~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~----~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~ 254 (357)
.++++++.++.||+++. .+.|.+.++........... ....|.+++++|.++.||+++... +.|...+.....
T Consensus 188 ~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~v~~~d~~~~~ 264 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA--AEVLVVDTRNGN 264 (353)
T ss_dssp CCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS--SEEEEEETTTCC
T ss_pred ceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC--CEEEEEECCCCc
Confidence 99999998999999887 57899999875544333222 234678899999988999999874 599999987655
Q ss_pred eEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCC
Q psy13635 255 RVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQ 325 (357)
Q Consensus 255 ~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~ 325 (357)
....+. ...|.++++++.++++|+++...+.|..++.+.......+. ....|.++++. +..+|++...
T Consensus 265 ~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 265 ILAKVA--APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD-TPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEE--CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE-CCSEEEEEEECTTSCEEEEEEEC
T ss_pred EEEEEE--cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe-cCCCCCeEEEcCCCCEEEEEEcc
Confidence 544443 34578899998888899999989999999986544433333 34588999986 4569998755
No 56
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=5.4e-17 Score=150.35 Aligned_cols=235 Identities=16% Similarity=0.155 Sum_probs=165.9
Q ss_pred CcEEEEEEEccCCEEEEEeCC--CC--eEEEEEcCCCCcceeEE------EEeCCcCCceeEEEEcCCCeEEEEeCC---
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHG--TE--MISCCTFDGNNVGSKHN------VITNGLITPDGLAIDWLTEKLYWTDSE--- 137 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~--~~--~I~~~~~~g~~~~~~~~------~~~~~~~~p~glavd~~~~~ly~td~~--- 137 (357)
..|.+|++++ ++++|++... .+ +|..++ +|.. .. .....+..|.++++|+ .++|||+|.+
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~-~g~~----~~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELT-QDGL----IPFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEE-TTEE----EESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHH
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEEC-CCCe----ecCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCc
Confidence 5899999987 5789999642 23 788887 4431 10 0123467899999996 5889999987
Q ss_pred --CCEEEEEEcCCCc-eEEEEec-CCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC---CCCeEEEEEcCCCce
Q psy13635 138 --TNKLEVSSLDGKK-RKVLYWE-DIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT---GTDRIEVCRLEGTHR 210 (357)
Q Consensus 138 --~~~I~~~~~~g~~-~~~~~~~-~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~---~~~~I~~~~~~g~~~ 210 (357)
..+|.++++.... .+.+... .. ......|+++++|+.++.+|++|. ..+.|.+++++....
T Consensus 90 ~~~~~i~~~d~~tg~~~~~~~~~~~~------------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~ 157 (343)
T 2qe8_A 90 KSVPKLVAWDTLNNQLSRVIYLPPPI------------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA 157 (343)
T ss_dssp TSCCEEEEEETTTTEEEEEEECCTTT------------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE
T ss_pred CCCCeEEEEECCCCeEEEEEECChhh------------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE
Confidence 5899999987443 3433211 11 111246899999988899999999 778999999874332
Q ss_pred EEEecC-----------------------------CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC----CC--c-
Q psy13635 211 KVLVNT-----------------------------DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN----GG--E- 254 (357)
Q Consensus 211 ~~~~~~-----------------------------~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d----g~--~- 254 (357)
..+... -...|+||+++|.+..||+++... .++++++.+ +. .
T Consensus 158 ~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~--~~l~~~~~~~~~~~~~~~~ 235 (343)
T 2qe8_A 158 ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS--TSMYRIKSADLSNLQLTDA 235 (343)
T ss_dssp EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC--SEEEEEEHHHHTCTTCCHH
T ss_pred EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC--CeEEEEEHHHhcCCCCChh
Confidence 222211 013589999999877999999884 499999853 11 0
Q ss_pred -----eEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeC-CCCCeEEEecC-CCCceEEEEEE-CCEEEEEeCCC
Q psy13635 255 -----RVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDF-DGNNRRELINE-NLPHVFGISLL-GDYVYWTDWQR 326 (357)
Q Consensus 255 -----~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~-dG~~~~~i~~~-~~~~p~gia~~-~~~ly~td~~~ 326 (357)
.... .....|.|+++| .+|+||+++...++|.+++. +|+. ..+... .+..|.+++++ ++.||+++...
T Consensus 236 ~~~~~~~~~--g~~g~pdgia~d-~~G~l~va~~~~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 236 ELGSKIERY--SEKPICDGISID-KDHNIYVGDLAHSAIGVITSADRAY-KLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp HHHTTCEEE--EECCSCSCEEEC-TTCCEEEEEGGGTEEEEEETTTTEE-EEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred hhhcceEec--ccCCCCceEEEC-CCCCEEEEccCCCeEEEEECCCCCE-EEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 0111 123479999999 57899999999999999999 7753 334332 37789999997 58899999766
Q ss_pred CeEE
Q psy13635 327 RSID 330 (357)
Q Consensus 327 ~~I~ 330 (357)
+++.
T Consensus 312 ~~~~ 315 (343)
T 2qe8_A 312 HHSA 315 (343)
T ss_dssp GGSG
T ss_pred cccc
Confidence 5543
No 57
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.77 E-value=7.7e-17 Score=150.00 Aligned_cols=231 Identities=14% Similarity=0.094 Sum_probs=161.8
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC--
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV-- 186 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~-- 186 (357)
.+++..++..|.+|++++ .+.||+++.. ++|.+++ +|.. +.+..... .......|.||++++.
T Consensus 23 ~~~va~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~i~-~g~~-~~~~~~~v-----------~~~g~~~p~gia~~pdf~ 87 (352)
T 2ism_A 23 VEEVVGGLEVPWALAFLP-DGGMLIAERP-GRIRLFR-EGRL-STYAELSV-----------YHRGESGLLGLALHPRFP 87 (352)
T ss_dssp EEEEECCCSCEEEEEECT-TSCEEEEETT-TEEEEEE-TTEE-EEEEECCC-----------CCSTTCSEEEEEECTTTT
T ss_pred EEEEECCCCCceEEEEcC-CCeEEEEeCC-CeEEEEE-CCCc-cEeecceE-----------eecCCCCceeEEECCCCC
Confidence 667788899999999997 5679999986 8999999 6653 22221110 0234568999999987
Q ss_pred -CCeEEEEeCCC-----CeEEEEEcCCC---ceEEEec------CCCCCceEEEEeCCCCEEEEEeCCC-----------
Q psy13635 187 -ARNLYWTDTGT-----DRIEVCRLEGT---HRKVLVN------TDLVEPRAITLSPAHGYLFWSDWNE----------- 240 (357)
Q Consensus 187 -~~~lY~td~~~-----~~I~~~~~~g~---~~~~~~~------~~~~~P~giavd~~~g~Ly~~d~~~----------- 240 (357)
++.||+++... ++|.+++.++. ..++++. .....|.+|+++|. |+||+++...
T Consensus 88 ~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~G~~~~~~~~~d~~~ 166 (352)
T 2ism_A 88 QEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYVTTGEVYERELAQDLAS 166 (352)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEEECCCTTCGGGGGCTTC
T ss_pred CCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEEEECCCCCCccccCCCC
Confidence 78999998754 68999998864 2233322 23457899999985 8999997431
Q ss_pred CCCeEEEEecCCC------------ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCe--------EEEEeCCCC----
Q psy13635 241 KRPKIERSLLNGG------------ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDK--------IEMIDFDGN---- 296 (357)
Q Consensus 241 ~~~~I~~~~~dg~------------~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~--------I~~~~~dG~---- 296 (357)
..++|.|++.+|+ ...+++..++.+|.|+++|+.+++||++|.+.+. |..+...+.
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp 246 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWP 246 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTT
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCC
Confidence 1369999999983 1233455678899999999778999999987766 666654331
Q ss_pred -----------CeEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCce------eEEEecccCCceeeee
Q psy13635 297 -----------NRRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGND------REVIIERSCTGVTRRR 355 (357)
Q Consensus 297 -----------~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~------~~~i~~~l~~p~~i~~ 355 (357)
............|.|+++.+|.+|++++..++|.+++...++. .+.+......|.++..
T Consensus 247 ~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 322 (352)
T 2ism_A 247 RVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQV 322 (352)
T ss_dssp TCCSCCCCTTSCCCSEECTTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEE
T ss_pred cccCCCCCCCCcCCeEecCCCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEE
Confidence 0000111223468999999999999999999999998743331 2334455567777753
No 58
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.76 E-value=1.5e-16 Score=148.03 Aligned_cols=258 Identities=11% Similarity=0.149 Sum_probs=175.2
Q ss_pred CcceEeccCCCcEEEEEEEccCCE-EEEEeCCCCeEEEEEcCCCCcc--e-eEEEEeCCcCCceeEEEEcC---CCeEEE
Q psy13635 61 LKPVTIIKDLEEGAAIDYYYKKSM-VCWTDHGTEMISCCTFDGNNVG--S-KHNVITNGLITPDGLAIDWL---TEKLYW 133 (357)
Q Consensus 61 ~~~~~~~~~~~~~~~i~~d~~~~~-ly~~d~~~~~I~~~~~~g~~~~--~-~~~~~~~~~~~p~glavd~~---~~~ly~ 133 (357)
-+.+.+...+..|++|++++. ++ ||+++.. ++|++++.+|.... . ...+...+...|.|||+++. ++.||+
T Consensus 8 ~~~~~va~~l~~P~~i~~~pd-G~~l~V~e~~-G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv 85 (353)
T 2g8s_A 8 VNVEVLQDKLDHPWALAFLPD-NHGMLITLRG-GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWL 85 (353)
T ss_dssp SEEEEEEEEESSEEEEEECST-TCCEEEEETT-TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEE
T ss_pred cEEEEEECCCCCcEEEEEcCC-CCEEEEEeCC-ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEE
Confidence 345556667889999999984 56 9999975 79999987764200 0 00122334557899999986 899999
Q ss_pred EeCC-------CCEEEEEEcCCC-----ceEEEEecCCCCcceeeeeccCc--ccccCCceEEEeCCCCeEEEEeCC---
Q psy13635 134 TDSE-------TNKLEVSSLDGK-----KRKVLYWEDIDQPRAIASYKLPT--IEVEHPDGVAVDWVARNLYWTDTG--- 196 (357)
Q Consensus 134 td~~-------~~~I~~~~~~g~-----~~~~~~~~~~~~p~~i~~~~~~~--~~~~~p~glavD~~~~~lY~td~~--- 196 (357)
++.. ..+|.++++++. ..++++.. + |. ...+.|.+|++++ .|+||++...
T Consensus 86 ~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~-~-----------p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~ 152 (353)
T 2g8s_A 86 SYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQ-M-----------PKLSTGNHFGGRLVFDG-KGYLFIALGENNQ 152 (353)
T ss_dssp EEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEEC-S-----------SCCBSSSCCCCCEEECS-SSEEEEEECCTTC
T ss_pred EEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEE-C-----------CCCCCCcccCccEEECC-CCcEEEEECCCCC
Confidence 9864 458999888653 22333321 1 11 2446789999996 6699999643
Q ss_pred ----------CCeEEEEEcCCC-------------ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEecCC
Q psy13635 197 ----------TDRIEVCRLEGT-------------HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK-RPKIERSLLNG 252 (357)
Q Consensus 197 ----------~~~I~~~~~~g~-------------~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~~dg 252 (357)
.++|.+++++|+ ..++. ..++..|.|+++|+.+|.||++|.+.. ...|.++...+
T Consensus 153 ~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~-a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~ 231 (353)
T 2g8s_A 153 RPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIW-SYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGK 231 (353)
T ss_dssp GGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEE-EECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTC
T ss_pred CCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEE-EEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCC
Confidence 358999999987 23333 347789999999997899999998742 01333332211
Q ss_pred C----------------------------ceEEEeeCCCCCceEEEEec------CCCEEEEEeCCCCeEEEEeCCCCCe
Q psy13635 253 G----------------------------ERVLLVKDRLGWPNGITLDV------DNEKLYWCDAKTDKIEMIDFDGNNR 298 (357)
Q Consensus 253 ~----------------------------~~~~~~~~~l~~P~giaid~------~~~~lY~~d~~~~~I~~~~~dG~~~ 298 (357)
. ......-.....|.|+++.. ..+.+|+++...++|+++++++...
T Consensus 232 nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~ 311 (353)
T 2g8s_A 232 NYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKV 311 (353)
T ss_dssp BCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEE
T ss_pred cCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeE
Confidence 1 00000001123689999963 2589999999999999999876422
Q ss_pred ---EEEecCCCCceEEEEEE-CCEEEEE-eCCCCeEEEEeC
Q psy13635 299 ---RELINENLPHVFGISLL-GDYVYWT-DWQRRSIDRVNK 334 (357)
Q Consensus 299 ---~~i~~~~~~~p~gia~~-~~~ly~t-d~~~~~I~~~~~ 334 (357)
..++......|.+|+++ +|.||++ |..+++|+|+.+
T Consensus 312 ~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 312 TEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp EEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred eeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 22333335689999998 5889996 667899999864
No 59
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.76 E-value=4.5e-16 Score=140.56 Aligned_cols=218 Identities=16% Similarity=0.182 Sum_probs=162.3
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
.+.+..++..|+|+++|+.++.|||++...++|.+++.++. .+.+.. ....|.++++|+ .+
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~-----------------~~~~~~~l~~~~-dg 80 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMH-----------------PSHHQNGHCLNK-QG 80 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEES-----------------SCSSEEEEEECT-TC
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEEC-----------------CCCCcceeeECC-CC
Confidence 56677788899999999877779999999999999999987 444321 123689999995 66
Q ss_pred eEEEEeCCCCeEEEEEc-CCCceEEEec---CCCCCceEEEEeCCCCEEEEEeCC--C-------------CCCeEEEEe
Q psy13635 189 NLYWTDTGTDRIEVCRL-EGTHRKVLVN---TDLVEPRAITLSPAHGYLFWSDWN--E-------------KRPKIERSL 249 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~-~g~~~~~~~~---~~~~~P~giavd~~~g~Ly~~d~~--~-------------~~~~I~~~~ 249 (357)
+||+++.+.+.|.++++ +|+....... .....|+++++|+ +|+||++|.. . ..+.|++++
T Consensus 81 ~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 81 HLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp CEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred cEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEEC
Confidence 89999988889999998 5654332211 1245789999998 4899998751 0 125899999
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC--CCC---eEEEecCCCCceEEEEEE-CCEEEEEe
Q psy13635 250 LNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD--GNN---RRELINENLPHVFGISLL-GDYVYWTD 323 (357)
Q Consensus 250 ~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d--G~~---~~~i~~~~~~~p~gia~~-~~~ly~td 323 (357)
.+|.. . .+...+..|+|+++++.+..| |++...++|++++.+ |.. .+.+ ......|.+|+++ +|++|++.
T Consensus 160 ~~g~~-~-~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 160 PDGTL-S-APIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp TTSCE-E-EEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE
T ss_pred CCCCE-E-EeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc
Confidence 88543 2 334677899999999766666 999999999999985 332 2333 3345679999998 68999998
Q ss_pred CCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 324 WQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 324 ~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
.+.|.++++ +|+....+..... |..+.
T Consensus 236 --~~~v~~~~~-~g~~~~~~~~~~~-~~~~~ 262 (296)
T 3e5z_A 236 --GDGVHVLTP-DGDELGRVLTPQT-TSNLC 262 (296)
T ss_dssp --TTEEEEECT-TSCEEEEEECSSC-CCEEE
T ss_pred --CCeEEEECC-CCCEEEEEECCCC-ceeEE
Confidence 679999998 5887776655443 55443
No 60
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.76 E-value=2.6e-16 Score=143.17 Aligned_cols=213 Identities=17% Similarity=0.215 Sum_probs=159.2
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
.+.+..++..++|+++++.++.|||+|..+++|.+++.+|... .+... ...|.++++|+ .|
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~-~~~~~-----------------~~~~~gl~~d~-dG 97 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVD-VLLDA-----------------TAFTNGNAVDA-QQ 97 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEE-EEEES-----------------CSCEEEEEECT-TS
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEE-EEeCC-----------------CCccceeeECC-CC
Confidence 5667788889999999998888999999999999999977643 22211 13689999996 56
Q ss_pred eEEEEeCCCCeEEEEEcCCCceEEEec---CCCCCceEEEEeCCCCEEEEEeCC--C-------------CCCeEEEEec
Q psy13635 189 NLYWTDTGTDRIEVCRLEGTHRKVLVN---TDLVEPRAITLSPAHGYLFWSDWN--E-------------KRPKIERSLL 250 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g~~~~~~~~---~~~~~P~giavd~~~g~Ly~~d~~--~-------------~~~~I~~~~~ 250 (357)
+||+++.+.++|.+++++|+....... ..+..|+++++++ +|.||++|.. . ....|++++.
T Consensus 98 ~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 98 RLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp CEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred CEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 799999888899999998764332211 1246799999997 5899998741 0 0257999998
Q ss_pred CCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCC-----CeEEEEeCCCCC---eEEEecCCCCceEEEEEE-CCEEEE
Q psy13635 251 NGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKT-----DKIEMIDFDGNN---RRELINENLPHVFGISLL-GDYVYW 321 (357)
Q Consensus 251 dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~-----~~I~~~~~dG~~---~~~i~~~~~~~p~gia~~-~~~ly~ 321 (357)
++.....+. .+..|+|+++++++..|||++... +.|++++.++.. .+.+.......|.||+++ +|+||+
T Consensus 177 ~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv 254 (305)
T 3dr2_A 177 DGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS 254 (305)
T ss_dssp SSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE
T ss_pred CCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE
Confidence 655444443 678899999998888899999874 799999987543 223332234578999998 588888
Q ss_pred EeCCCCeEEEEeCccCceeEEEecc
Q psy13635 322 TDWQRRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 322 td~~~~~I~~~~~~~g~~~~~i~~~ 346 (357)
+. .+.|+++++ +|+....+...
T Consensus 255 ~~--~~gv~~~~~-~g~~~~~~~~~ 276 (305)
T 3dr2_A 255 SS--GTGVCVFDS-DGQLLGHIPTP 276 (305)
T ss_dssp CC--SSEEEEECT-TSCEEEEEECS
T ss_pred ec--CCcEEEECC-CCCEEEEEECC
Confidence 87 356999998 78877766543
No 61
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.75 E-value=1.1e-14 Score=132.93 Aligned_cols=289 Identities=11% Similarity=-0.008 Sum_probs=196.8
Q ss_pred CeEEEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCC
Q psy13635 41 AQMLLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT 118 (357)
Q Consensus 41 ~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 118 (357)
...+++++ .+.|..+|+.++............+ ++++++.++.||+++..++.|+.+++.+... ....+. .-..
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--~~~~~~-~~~~ 84 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP--KVVAIQ-EGQS 84 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC--EEEEEE-ECSS
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce--eEEecc-cCCC
Confidence 34555555 4579999987644333333445566 9999998889999999889999999987641 022222 2356
Q ss_pred cee-EEEEcCCCeEEEEeCCCC--EEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 119 PDG-LAIDWLTEKLYWTDSETN--KLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 119 p~g-lavd~~~~~ly~td~~~~--~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
|.. +++++.++.||.++...+ .|.+++++..........+ ..|.++++++.++.||+++.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-----------------~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 85 SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-----------------YDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-----------------TTEEEEEECTTSSCEEEEEE
T ss_pred CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-----------------CCccceEECCCCCEEEEEec
Confidence 778 999998888994443334 9999998765543333221 36889999988888999998
Q ss_pred CCCe-EEEEEcCCCce-----EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce---EEEeeCCCCCc
Q psy13635 196 GTDR-IEVCRLEGTHR-----KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER---VLLVKDRLGWP 266 (357)
Q Consensus 196 ~~~~-I~~~~~~g~~~-----~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~---~~~~~~~l~~P 266 (357)
..+. |.+.+++.... .... .....|.+++++|.+.+||++.... +.|...+++.... ...+.. -..|
T Consensus 148 ~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~--~~v~v~d~~~~~~~~~~~~~~~-~~~~ 223 (331)
T 3u4y_A 148 SSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIG--NSIGILETQNPENITLLNAVGT-NNLP 223 (331)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTT--TEEEEEECSSTTSCEEEEEEEC-SSCC
T ss_pred CCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCC--CeEEEEECCCCcccceeeeccC-CCCC
Confidence 8777 77776653221 1122 2345799999999877899999874 5899999875554 333333 3678
Q ss_pred eEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEE---ecC--CCCc----eEEEEEE--CCEEEEEeCCCCeEEEEeCc
Q psy13635 267 NGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRREL---INE--NLPH----VFGISLL--GDYVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i---~~~--~~~~----p~gia~~--~~~ly~td~~~~~I~~~~~~ 335 (357)
.++++++++..||++....+.|..++......+.+ ... .... ..++++. +..||+++...+.|..++.
T Consensus 224 ~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~- 302 (331)
T 3u4y_A 224 GTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTI- 302 (331)
T ss_dssp CCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEET-
T ss_pred ceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEe-
Confidence 99999988888999998888999999875443222 111 0111 1235664 5789999998899999997
Q ss_pred cCceeEEEecccCCceeeeec
Q psy13635 336 TGNDREVIIERSCTGVTRRRT 356 (357)
Q Consensus 336 ~g~~~~~i~~~l~~p~~i~~~ 356 (357)
.++.... ..++....++..|
T Consensus 303 ~~~~~~~-~~~~~~~g~~~~~ 322 (331)
T 3u4y_A 303 SGKVVGY-VAGIEANGGIAIC 322 (331)
T ss_dssp TSCEEEE-CTTCCCBSCEEEC
T ss_pred cCCcccc-eecccccCCeEEE
Confidence 4444333 3344444444444
No 62
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.73 E-value=1.6e-13 Score=128.04 Aligned_cols=278 Identities=18% Similarity=0.188 Sum_probs=208.4
Q ss_pred eEEEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc
Q psy13635 42 QMLLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP 119 (357)
Q Consensus 42 ~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p 119 (357)
++++++. .+.|+..|+... +..........+.++++++.+..||++...++.|+..++.... ....+..+ ..|
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~---~~~~~~~~-~~v 76 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSN-KVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN---VIATVPAG-SSP 76 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTT-EEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE---EEEEEECS-SSE
T ss_pred CEEEEEcCCCCEEEEEECCCC-eEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCe---EEEEEECC-CCc
Confidence 4455555 356888998763 3333444556799999999888999998888999999987653 22333322 388
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCe
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDR 199 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~ 199 (357)
.++++++.++.||++....+.|.+.++............ ..|.++++++.++.||++....+.
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-----------------~~~~~~~~s~dg~~l~~~~~~~~~ 139 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-----------------KSPLGLALSPDGKKLYVTNNGDKT 139 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-----------------SSEEEEEECTTSSEEEEEETTTTE
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-----------------CCcceEEECCCCCEEEEEeCCCCE
Confidence 999999988889999988899999999876544333221 257889999888889999998899
Q ss_pred EEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEE
Q psy13635 200 IEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLY 279 (357)
Q Consensus 200 I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY 279 (357)
|...++........... ...|.+++++|.+..||++.... +.|...++........+.. ...|.++++++.+..||
T Consensus 140 v~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~--~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~ 215 (391)
T 1l0q_A 140 VSVINTVTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFDS--MSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAY 215 (391)
T ss_dssp EEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEE
T ss_pred EEEEECCCCcEEEEEec-CCCcceEEECCCCCEEEEEeCCC--CEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEE
Confidence 99999876544443332 36789999999878899988774 5899999887655554433 35789999998888999
Q ss_pred EEeC--CCCeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEeCccCceeEEEecc
Q psy13635 280 WCDA--KTDKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQRRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 280 ~~d~--~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~ 346 (357)
++.. ..+.|...++........+. ....|.++++. +..+|++....+.|...+..+++....+..+
T Consensus 216 ~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 216 VTNVDKYFNTVSMIDTGTNKITARIP-VGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp EEEECSSCCEEEEEETTTTEEEEEEE-CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred EEecCcCCCcEEEEECCCCeEEEEEe-cCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECC
Confidence 9886 67899999987654433433 24468888887 4589999888899999998888877766543
No 63
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.73 E-value=8.3e-15 Score=134.88 Aligned_cols=244 Identities=12% Similarity=0.119 Sum_probs=172.4
Q ss_pred cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE----EEeCCcCCceeEEEEcC---CCeEEEE
Q psy13635 62 KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN----VITNGLITPDGLAIDWL---TEKLYWT 134 (357)
Q Consensus 62 ~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~~~~~~~~p~glavd~~---~~~ly~t 134 (357)
..+.+...+..|++|++.+ ++.||+++...++|++++.++... .... +...+...|.|||+++. ++.||++
T Consensus 23 ~~~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred eeEEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 4556778899999999998 578999999889999998764431 1111 12345678999999984 7889986
Q ss_pred e--CCCCEEEEEEcCCC--------ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC---------
Q psy13635 135 D--SETNKLEVSSLDGK--------KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT--------- 195 (357)
Q Consensus 135 d--~~~~~I~~~~~~g~--------~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~--------- 195 (357)
. ...++|.|+.+++. ..++++.. +|....+....|++++ .|+||++..
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~------------~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~q 167 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRG------------IPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQ 167 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEE------------ECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTT
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEc------------CCCCCCccCccccCCC-CCCEEEEECCCCCCcccc
Confidence 4 35679999998762 12333321 1233456788899996 679999942
Q ss_pred ----CCCeEEEEEcCCC--------ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEecCCCce-------
Q psy13635 196 ----GTDRIEVCRLEGT--------HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK-RPKIERSLLNGGER------- 255 (357)
Q Consensus 196 ----~~~~I~~~~~~g~--------~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~~dg~~~------- 255 (357)
..++|.|++++|+ ..++ ...++.+|.|+++|| .|.||++|.+.. .-.|.++.. |.+.
T Consensus 168 d~~~~~G~IlRi~~dG~ip~~nPf~~~~i-~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~-G~nyGwP~~~g 244 (347)
T 3das_A 168 DRKSLGGKILRMTPDGEPAPGNPFPGSPV-YSYGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIKP-GDNYGWPEAEG 244 (347)
T ss_dssp CTTCSTTCEEEECTTSSBCTTCSSTTCCE-EEBCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEECT-TCBCCTTTCCS
T ss_pred CCCCCCCEEEEEeCCCCccCCCCCCCCeE-EeeCCCCcceEEECC-CCCEEEEecCCCCCceeeEEcC-CCEecCCcccC
Confidence 2469999999997 3334 345789999999999 599999998753 124444432 2110
Q ss_pred ----------EEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC----eEEEecCCCCceEEEEEE-CCEEE
Q psy13635 256 ----------VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN----RRELINENLPHVFGISLL-GDYVY 320 (357)
Q Consensus 256 ----------~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~----~~~i~~~~~~~p~gia~~-~~~ly 320 (357)
...+......|.|+++. ++.+|+++....+|.++.+++.. .+.++......|.+|++. +|.||
T Consensus 245 ~~~~~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~ly 322 (347)
T 3das_A 245 KGGGSGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLW 322 (347)
T ss_dssp SCCCTTCCCCSEEECTTTCCEEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEE
T ss_pred CCCCccccCCcEecCCCCCCCcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEE
Confidence 01111122478999994 78999999999999999987653 244555556789999998 79999
Q ss_pred EEeCC
Q psy13635 321 WTDWQ 325 (357)
Q Consensus 321 ~td~~ 325 (357)
+++..
T Consensus 323 v~td~ 327 (347)
T 3das_A 323 LVTSN 327 (347)
T ss_dssp EEECT
T ss_pred EEEcC
Confidence 98654
No 64
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.73 E-value=2.5e-15 Score=139.86 Aligned_cols=230 Identities=17% Similarity=0.115 Sum_probs=161.1
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC--
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV-- 186 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~-- 186 (357)
.+++..++..|.+|++++ .++||+++.. ++|.+++.+|. +.+..... .......|.||++++.
T Consensus 21 ~~~va~~l~~P~~ia~~p-dG~l~V~e~~-g~I~~~d~~G~--~~~~~~~v-----------~~~g~~g~~gia~~pdf~ 85 (354)
T 3a9g_A 21 ISEVASDLEVPWSIAPLG-GGRYLVTERP-GRLVLISPSGK--KLVASFDV-----------ANVGEAGLLGLALHPEFP 85 (354)
T ss_dssp EEEEECSCSCEEEEEEEE-TTEEEEEETT-TEEEEECSSCE--EEEEECCC-----------CCSTTCSEEEEEECTTTT
T ss_pred EEEEeCCCCCCeEEEEcC-CCeEEEEeCC-CEEEEEeCCCc--eEeeccce-----------eecCCCceeeEEeCCCCC
Confidence 567778899999999997 6789999987 99999987776 33321110 0223457999999987
Q ss_pred -CCeEEEEeCC---C----CeEEEEEcCCC-----ceEEEec----CCCCCceEEEEeCCCCEEEEEeCCC---------
Q psy13635 187 -ARNLYWTDTG---T----DRIEVCRLEGT-----HRKVLVN----TDLVEPRAITLSPAHGYLFWSDWNE--------- 240 (357)
Q Consensus 187 -~~~lY~td~~---~----~~I~~~~~~g~-----~~~~~~~----~~~~~P~giavd~~~g~Ly~~d~~~--------- 240 (357)
++.||+++.. . ++|.+++.++. ..++++. .....|.+|+++|. |+||++....
T Consensus 86 ~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pD-G~Lyvt~G~~~~~~~~~d~ 164 (354)
T 3a9g_A 86 KKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPD-GMLYITTGDAADPRLAQDL 164 (354)
T ss_dssp TSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTT-SCEEEECCCTTCGGGGTCT
T ss_pred cCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCC-CcEEEEECCCCCCccccCC
Confidence 8999999863 3 68999998875 2333322 23457899999985 8999996421
Q ss_pred --CCCeEEEEecCCCc-------eEEEeeCCCCCceEEEEecCCCEEEEEeCCCCe---EEEEeCCCCC-----------
Q psy13635 241 --KRPKIERSLLNGGE-------RVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDK---IEMIDFDGNN----------- 297 (357)
Q Consensus 241 --~~~~I~~~~~dg~~-------~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~---I~~~~~dG~~----------- 297 (357)
..++|.|++.+|+. ..+++..++.+|.||++|+.+++||++|.+.+. |..+...+.-
T Consensus 165 ~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~ 244 (354)
T 3a9g_A 165 SSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGR 244 (354)
T ss_dssp TCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCC
T ss_pred CCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCC
Confidence 13689999999862 234556788999999999778999999987754 6666542210
Q ss_pred ---eEE-Eec-CCCCceEEEEE--------ECCEEEEEeCCCCeEEEEeCcc-Ccee--EEEecc-cCCceeee
Q psy13635 298 ---RRE-LIN-ENLPHVFGISL--------LGDYVYWTDWQRRSIDRVNKIT-GNDR--EVIIER-SCTGVTRR 354 (357)
Q Consensus 298 ---~~~-i~~-~~~~~p~gia~--------~~~~ly~td~~~~~I~~~~~~~-g~~~--~~i~~~-l~~p~~i~ 354 (357)
... ... .....|.|+++ .+|.+|++++..++|.+++... |+.. +.+..+ ...|.++.
T Consensus 245 ~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~ 318 (354)
T 3a9g_A 245 GEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVV 318 (354)
T ss_dssp TTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEE
T ss_pred CCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEE
Confidence 000 111 12346999999 4689999999999999998743 3322 334432 45677765
No 65
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.73 E-value=3.4e-14 Score=130.85 Aligned_cols=278 Identities=17% Similarity=0.160 Sum_probs=182.3
Q ss_pred ccCCCcEEEEEEEccCCEEEEEeCC--CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEE
Q psy13635 67 IKDLEEGAAIDYYYKKSMVCWTDHG--TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVS 144 (357)
Q Consensus 67 ~~~~~~~~~i~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~ 144 (357)
......|.+++++++ ++||+++.. ++.|+.+++++... ............|.++++++.++.||+++...+.|..+
T Consensus 36 ~~~~~~p~~~a~spd-g~l~~~~~~~~~~~v~~~~~~~g~~-~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 36 LAATQNPTYLALSAK-DCLYSVDKEDDEGGIAAWQIDGQTA-HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EEECSCCCCEEECTT-CEEEEEEEETTEEEEEEEEEETTEE-EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeccCCcceEEEccC-CeEEEEEecCCCceEEEEEecCCcE-EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 345678999999985 459998763 57898888876531 11122223456899999999888899999888899888
Q ss_pred EcCCC-ceEEEEecCC--CCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC--CCceEE--EecCC
Q psy13635 145 SLDGK-KRKVLYWEDI--DQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE--GTHRKV--LVNTD 217 (357)
Q Consensus 145 ~~~g~-~~~~~~~~~~--~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~--g~~~~~--~~~~~ 217 (357)
+++.. ..+.+..... ..|. +......|.++++++.++ +|+++...++|...+++ |..... +....
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~-------~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~ 185 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPR-------PEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA 185 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSS-------TTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCT
T ss_pred EeCCCCCeeecceeecCCCCCC-------ccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC
Confidence 87522 2222211100 0110 011223577899998766 99999998999888877 332211 11223
Q ss_pred CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC--CceEEE--eeCC------CCCceEEEEecCCCEEEEEeCCCCe
Q psy13635 218 LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG--GERVLL--VKDR------LGWPNGITLDVDNEKLYWCDAKTDK 287 (357)
Q Consensus 218 ~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg--~~~~~~--~~~~------l~~P~giaid~~~~~lY~~d~~~~~ 287 (357)
...|.+++++|.+.+||+++... +.|...+++. .....+ .... ...|.++++++++..||+++...+.
T Consensus 186 g~~p~~~~~spdg~~l~v~~~~~--~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~ 263 (347)
T 3hfq_A 186 GFGPRHLVFSPDGQYAFLAGELS--SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT 263 (347)
T ss_dssp TCCEEEEEECTTSSEEEEEETTT--TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE
T ss_pred CCCCceEEECCCCCEEEEEeCCC--CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE
Confidence 35799999999877799998874 4777777663 222211 1111 1458899999888889999988889
Q ss_pred EEEEeCCCCC-eEEE--ecCCCCceEEEEEE--CCEEEEEeCCCCeEEEE--eCccCceeEEEe-cccCCceeeeec
Q psy13635 288 IEMIDFDGNN-RREL--INENLPHVFGISLL--GDYVYWTDWQRRSIDRV--NKITGNDREVII-ERSCTGVTRRRT 356 (357)
Q Consensus 288 I~~~~~dG~~-~~~i--~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~--~~~~g~~~~~i~-~~l~~p~~i~~~ 356 (357)
|..++++..+ .+.+ +......|.++++. +.+||+++...+.|..+ +..+|+...+-. ..+..|.-+++.
T Consensus 264 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~~~~~p~p~~~~~~ 340 (347)
T 3hfq_A 264 LAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQKDVTVPEGVCVRFL 340 (347)
T ss_dssp EEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEECTTEEEEEEC
T ss_pred EEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecccceecCCCcEEEeh
Confidence 9888876322 1112 22234578999997 46899999887876655 766677655432 356677776653
No 66
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=1.6e-14 Score=132.34 Aligned_cols=248 Identities=11% Similarity=0.079 Sum_probs=178.2
Q ss_pred ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC----
Q psy13635 63 PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET---- 138 (357)
Q Consensus 63 ~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~---- 138 (357)
...+......+.++++++ +++|||++...+.|++++.++.. ...+.......|.++++|+ .+++|+++...
T Consensus 37 ~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~ 111 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKE---IKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKST 111 (333)
T ss_dssp EEEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCC---EEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSC
T ss_pred eEEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCc---EEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCC
Confidence 334445666789999996 56799999988999999998764 2333333446799999996 57899998766
Q ss_pred CEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC------CCeEEEEEcCCCceEE
Q psy13635 139 NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG------TDRIEVCRLEGTHRKV 212 (357)
Q Consensus 139 ~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~------~~~I~~~~~~g~~~~~ 212 (357)
+.|.+++.++...+.+.... .....|.++++|+ .+++|+++.. ...|+++++++.....
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~--------------~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDL--------------STAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP 176 (333)
T ss_dssp CEEEEECTTSCSCEEEECSS--------------SSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEE
T ss_pred ceEEEEeCCCCEEEEEEccC--------------ccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEE
Confidence 79999999887665443211 1124689999996 5689999875 3589999988755444
Q ss_pred EecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC--CCceEE-----Eee-CCCCCceEEEEecCCCEEEEEeCC
Q psy13635 213 LVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN--GGERVL-----LVK-DRLGWPNGITLDVDNEKLYWCDAK 284 (357)
Q Consensus 213 ~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d--g~~~~~-----~~~-~~l~~P~giaid~~~~~lY~~d~~ 284 (357)
+.. ....|.+++++|.+..||+++... +.|.+.+.+ |..... ... .+...|.++++| .+++||+++..
T Consensus 177 ~~~-~~~~~~~i~~~~dg~~l~v~~~~~--~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d-~~G~l~v~~~~ 252 (333)
T 2dg1_A 177 IIQ-NISVANGIALSTDEKVLWVTETTA--NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCID-SDDNLYVAMYG 252 (333)
T ss_dssp EEE-EESSEEEEEECTTSSEEEEEEGGG--TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEB-TTCCEEEEEET
T ss_pred eec-CCCcccceEECCCCCEEEEEeCCC--CeEEEEEecCCCcCcccccceEEEecCCCCCCCceEEC-CCCCEEEEEcC
Confidence 432 356799999999766899999764 489999984 433221 111 122479999999 57889999988
Q ss_pred CCeEEEEeCCCCCeEEEecCC-----CCceEEEEEE--CCEEEEEeCC-----CCeEEEEeC
Q psy13635 285 TDKIEMIDFDGNNRRELINEN-----LPHVFGISLL--GDYVYWTDWQ-----RRSIDRVNK 334 (357)
Q Consensus 285 ~~~I~~~~~dG~~~~~i~~~~-----~~~p~gia~~--~~~ly~td~~-----~~~I~~~~~ 334 (357)
.+.|.+++.+|.....+.... +..|.++++. ++.||++... .+.|++++.
T Consensus 253 ~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 253 QGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp TTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred CCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 889999999877655543221 1268899986 3589998765 347888875
No 67
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=1.5e-13 Score=125.38 Aligned_cols=295 Identities=13% Similarity=0.109 Sum_probs=194.0
Q ss_pred eEEEEEe--CCcEEEEEcCCCCc--ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcC--CCCcceeEEEEeCC
Q psy13635 42 QMLLFAT--SKDIRIANLSRPLK--PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD--GNNVGSKHNVITNG 115 (357)
Q Consensus 42 ~~l~~~~--~~~i~~~~~~~~~~--~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~--g~~~~~~~~~~~~~ 115 (357)
.+++.++ .+.|+.++++.... ..........|.++++++.++.||+++..++.|...+++ +... .....+..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~- 82 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-TFAAESAL- 82 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE-EEEEEEEC-
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce-eecccccc-
Confidence 4555553 45688888753222 222344566788999999888999999887888887776 4321 11112222
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
...|.++++++.++.||+++...+.|..++++ |...+.+... .....|.++++++.++.||+++
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~---------------~~~~~~~~~~~s~dg~~l~~~~ 147 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV---------------EGLDGCHSANISPDNRTLWVPA 147 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE---------------CCCTTBCCCEECTTSSEEEEEE
T ss_pred CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc---------------cCCCCceEEEECCCCCEEEEec
Confidence 23899999999888899999888899998873 3222222111 1123588999998888999999
Q ss_pred CCCCeEEEEEcCC-CceE-----EEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC--CceE--EEee---C
Q psy13635 195 TGTDRIEVCRLEG-THRK-----VLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG--GERV--LLVK---D 261 (357)
Q Consensus 195 ~~~~~I~~~~~~g-~~~~-----~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg--~~~~--~~~~---~ 261 (357)
...+.|.+.+++. .... .........|.+++++|.+.+||++.... +.|...+++. .... .... .
T Consensus 148 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~--~~i~~~~~~~~~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 148 LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN--SSVDVWELKDPHGNIECVQTLDMMPE 225 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT--TEEEEEESSCTTSCCEEEEEEECSCT
T ss_pred CCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC--CEEEEEEecCCCCcEEEEeeccccCc
Confidence 7778899988764 3222 12222335799999999877899998664 5888888854 2221 1111 1
Q ss_pred C---CCCceEEEEecCCCEEEEEeCCCCeEEEEeCC--CCCeEEEec-CCCCceEEEEEE--CCEEEEEeCCCCeEEEE-
Q psy13635 262 R---LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD--GNNRRELIN-ENLPHVFGISLL--GDYVYWTDWQRRSIDRV- 332 (357)
Q Consensus 262 ~---l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d--G~~~~~i~~-~~~~~p~gia~~--~~~ly~td~~~~~I~~~- 332 (357)
+ ...|.++++++.+..||++....+.|..++.+ +...+.+.. .....|.++++. +..||+++...+.|..+
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEE
Confidence 1 34677899998888999999888999999886 333222211 122348888886 46799998777776654
Q ss_pred -eCccCceeEEE-ecccCCceeeee
Q psy13635 333 -NKITGNDREVI-IERSCTGVTRRR 355 (357)
Q Consensus 333 -~~~~g~~~~~i-~~~l~~p~~i~~ 355 (357)
+..+|+...+- ......|..+..
T Consensus 306 ~d~~~g~~~~~~~~~~g~~p~~i~~ 330 (343)
T 1ri6_A 306 IVGEQGLLHEKGRYAVGQGPMWVVV 330 (343)
T ss_dssp EETTTTEEEEEEEEECSSSCCEEEE
T ss_pred EcCCCceeeEccccccCCCCeeEEE
Confidence 66556543322 122357777754
No 68
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.69 E-value=8.8e-15 Score=132.55 Aligned_cols=228 Identities=15% Similarity=0.163 Sum_probs=161.8
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEE-------eCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceE
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWT-------DSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGV 181 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~t-------d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~gl 181 (357)
...+..++..|+++++| .++.||++ +...+.|.++++.......+..... ......|.++
T Consensus 10 ~~~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~------------~~~~~~~~~i 76 (314)
T 1pjx_A 10 FTKVTEDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEV------------NGYGGIPAGC 76 (314)
T ss_dssp CEEEECCCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEE------------TTEECCEEEE
T ss_pred HhhhhccCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEeccc------------CCCCCCCceE
Confidence 34567889999999999 57899999 7778899999965444433321000 0112468999
Q ss_pred EEeCCCCeEEEEeCCCCeEEEEEcCCCceEEE-ecC----CCCCceEEEEeCCCCEEEEEeCCCC-------------CC
Q psy13635 182 AVDWVARNLYWTDTGTDRIEVCRLEGTHRKVL-VNT----DLVEPRAITLSPAHGYLFWSDWNEK-------------RP 243 (357)
Q Consensus 182 avD~~~~~lY~td~~~~~I~~~~~~g~~~~~~-~~~----~~~~P~giavd~~~g~Ly~~d~~~~-------------~~ 243 (357)
++|+.+++||+++... .|.+++++|+. ..+ ... ....|+++++|+. |+||+++.... .+
T Consensus 77 ~~~~~~g~l~v~~~~~-~l~~~d~~g~~-~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 1pjx_A 77 QCDRDANQLFVADMRL-GLLVVQTDGTF-EEIAKKDSEGRRMQGCNDCAFDYE-GNLWITAPAGEVAPADYTRSMQEKFG 153 (314)
T ss_dssp EECSSSSEEEEEETTT-EEEEEETTSCE-EECCSBCTTSCBCBCCCEEEECTT-SCEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred EEecCCCcEEEEECCC-CEEEEeCCCCE-EEEEeccCCCccccCCcCEEECCC-CCEEEEecCcccccccccccccCCCC
Confidence 9997658999998754 89999998543 333 221 2346999999975 89999987530 14
Q ss_pred eEEEEecCCCceEEEeeCCCCCceEEEEe----cCCCEEEEEeCCCCeEEEEeCCCCCe----EEEe--cCCC-CceEEE
Q psy13635 244 KIERSLLNGGERVLLVKDRLGWPNGITLD----VDNEKLYWCDAKTDKIEMIDFDGNNR----RELI--NENL-PHVFGI 312 (357)
Q Consensus 244 ~I~~~~~dg~~~~~~~~~~l~~P~giaid----~~~~~lY~~d~~~~~I~~~~~dG~~~----~~i~--~~~~-~~p~gi 312 (357)
.|++.+.+|.. ..+. ..+..|++++++ +.++.||+++...++|++++.++.+. ..+. .... ..|.++
T Consensus 154 ~l~~~~~~g~~-~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 154 SIYCFTTDGQM-IQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp EEEEECTTSCE-EEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred eEEEECCCCCE-EEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 89999988543 2222 345679999998 76668999999899999998753221 1121 1122 679999
Q ss_pred EEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 313 SLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 313 a~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
+++ +|.+|+++...+.|.++++.+|+....+......|.++.
T Consensus 232 ~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~ 274 (314)
T 1pjx_A 232 DFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLH 274 (314)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEE
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEE
Confidence 998 589999998889999999866887776665556666664
No 69
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.68 E-value=1.4e-13 Score=126.38 Aligned_cols=230 Identities=13% Similarity=0.101 Sum_probs=164.2
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
....+.+..+++.++.+||+|...+.|++++.++.. ...... -..|.++++++ .+++|++. .+.|.+++.++
T Consensus 47 ~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~----~~~~~~-~~~v~~i~~~~-dg~l~v~~--~~gl~~~d~~~ 118 (326)
T 2ghs_A 47 PMLLGEGPTFDPASGTAWWFNILERELHELHLASGR----KTVHAL-PFMGSALAKIS-DSKQLIAS--DDGLFLRDTAT 118 (326)
T ss_dssp CCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE----EEEEEC-SSCEEEEEEEE-TTEEEEEE--TTEEEEEETTT
T ss_pred CCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc----EEEEEC-CCcceEEEEeC-CCeEEEEE--CCCEEEEECCC
Confidence 345688999999889999999999999999998763 222222 24689999996 57788876 34699999866
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC------CCeEEEEEcCCCceEEEecCCCCCce
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG------TDRIEVCRLEGTHRKVLVNTDLVEPR 222 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~------~~~I~~~~~~g~~~~~~~~~~~~~P~ 222 (357)
...+.+..... ......|+++++|+ .|++|+++.. .+.|++++ +|+... +. .....|+
T Consensus 119 g~~~~~~~~~~------------~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~-~~-~~~~~~~ 182 (326)
T 2ghs_A 119 GVLTLHAELES------------DLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKVTK-LF-ADISIPN 182 (326)
T ss_dssp CCEEEEECSST------------TCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEEEE-EE-EEESSEE
T ss_pred CcEEEEeeCCC------------CCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcEEE-ee-CCCcccC
Confidence 55544432110 01123688999996 5678888753 35899998 665433 22 2446799
Q ss_pred EEEEeCCCCEEEEEeCCCCCCeEEEEecC---C-C--ceEEEee--CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 223 AITLSPAHGYLFWSDWNEKRPKIERSLLN---G-G--ERVLLVK--DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 223 giavd~~~g~Ly~~d~~~~~~~I~~~~~d---g-~--~~~~~~~--~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
++++++.+..||+++... +.|++.+.+ | . ....+.. .....|.++++| .+++||++....+.|.+++++
T Consensus 183 ~i~~s~dg~~lyv~~~~~--~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d-~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTKV--NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD-AEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEECTTSCEEEEEETTT--CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC-TTSCEEEEEETTTEEEEECTT
T ss_pred CeEEcCCCCEEEEEECCC--CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEEC-CCCCEEEEEeCCCEEEEECCC
Confidence 999999877899999874 599999985 3 2 1233322 234579999999 678999999888899999998
Q ss_pred CCCeEEEecCCCCceEEEEEE-C--CEEEEEeCCC
Q psy13635 295 GNNRRELINENLPHVFGISLL-G--DYVYWTDWQR 326 (357)
Q Consensus 295 G~~~~~i~~~~~~~p~gia~~-~--~~ly~td~~~ 326 (357)
|.....+. .....|.++++. . +.||++....
T Consensus 260 g~~~~~i~-~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 260 GNHIARYE-VPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp CCEEEEEE-CSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCEEEEEE-CCCCCcEEEEEecCCCCEEEEEecCC
Confidence 76555443 234579999987 2 6899987665
No 70
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=9.3e-13 Score=121.92 Aligned_cols=275 Identities=13% Similarity=0.072 Sum_probs=181.2
Q ss_pred CCCcEEEEEEEccCCEEEEEeCC---CCeEEEEEcCC--CCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEE
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHG---TEMISCCTFDG--NNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEV 143 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~---~~~I~~~~~~g--~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~ 143 (357)
....|..+++++++..||.++.. .+.|....++. .. ..........-..|..+++ .++.||+++...+.|..
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT-LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE-EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc-EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 56788899999988899999883 46665544443 22 1112223334467999999 47889999998899999
Q ss_pred EEcCCC--ce---EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCc-------e-
Q psy13635 144 SSLDGK--KR---KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTH-------R- 210 (357)
Q Consensus 144 ~~~~g~--~~---~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~-------~- 210 (357)
++++.. .. ..+...+. .|.. .......|.++++++.++.||+++.+.+.|.+.+++... .
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~-~~~~------~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~ 197 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGS-GPDK------ERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFL 197 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCC-CSCT------TTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCE
T ss_pred EEeCCCCcCcccceeEEccCC-CCCc------cccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccccccee
Confidence 887532 11 11111110 0000 011123568899999888899999988888888776432 1
Q ss_pred -----EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe-----eCCCCCceEEEEecCCCEEEE
Q psy13635 211 -----KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV-----KDRLGWPNGITLDVDNEKLYW 280 (357)
Q Consensus 211 -----~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~-----~~~l~~P~giaid~~~~~lY~ 280 (357)
..........|++++++|...+||+++... +.|...+++......+. ......|.++++++++..||+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~--~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v 275 (361)
T 3scy_A 198 TKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG--GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYA 275 (361)
T ss_dssp EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT--CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEE
T ss_pred ecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC--CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEE
Confidence 122223456799999999877899999764 48888887654332221 123456889999988888999
Q ss_pred EeCC-CCeEEEEeCC--CCCeEEE--ecCCCCceEEEEEE--CCEEEEEeCCCCeEEE--EeCccCceeEEE-ecccCCc
Q psy13635 281 CDAK-TDKIEMIDFD--GNNRREL--INENLPHVFGISLL--GDYVYWTDWQRRSIDR--VNKITGNDREVI-IERSCTG 350 (357)
Q Consensus 281 ~d~~-~~~I~~~~~d--G~~~~~i--~~~~~~~p~gia~~--~~~ly~td~~~~~I~~--~~~~~g~~~~~i-~~~l~~p 350 (357)
++.. .+.|..++.+ ....+.+ ... ...|.++++. +.+||+++...+.|.. ++..+|+...+. ......|
T Consensus 276 ~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p 354 (361)
T 3scy_A 276 SNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKP 354 (361)
T ss_dssp EECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSE
T ss_pred ECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCC
Confidence 9988 7888887765 2222212 122 4578899987 4679999988787765 676667655443 2255678
Q ss_pred eeeeec
Q psy13635 351 VTRRRT 356 (357)
Q Consensus 351 ~~i~~~ 356 (357)
..|.+.
T Consensus 355 ~~v~~~ 360 (361)
T 3scy_A 355 VCLKFV 360 (361)
T ss_dssp EEEEEE
T ss_pred eEEEEc
Confidence 777653
No 71
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.67 E-value=2.4e-13 Score=124.02 Aligned_cols=235 Identities=13% Similarity=0.033 Sum_probs=171.1
Q ss_pred EEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce-EEEEe
Q psy13635 78 YYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR-KVLYW 156 (357)
Q Consensus 78 ~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~-~~~~~ 156 (357)
|+...+.+|+++..++.|..+++.... ....+..+...| ++++++.++.||+++...++|.++++..... .....
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLE---ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCC---EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccc---eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 556678999999999999999988664 234444556667 9999998888999999889999999876554 32222
Q ss_pred cCCCCcceeeeeccCcccccCCce-EEEeCCCCeEEEEeCCCC--eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEE
Q psy13635 157 EDIDQPRAIASYKLPTIEVEHPDG-VAVDWVARNLYWTDTGTD--RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYL 233 (357)
Q Consensus 157 ~~~~~p~~i~~~~~~~~~~~~p~g-lavD~~~~~lY~td~~~~--~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~L 233 (357)
.+ ..|.. +++++.++.||.+....+ .|.+.+++......... ....|.+++++|.+.+|
T Consensus 81 ~~-----------------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l 142 (331)
T 3u4y_A 81 EG-----------------QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGNGL 142 (331)
T ss_dssp EC-----------------SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSSCE
T ss_pred cC-----------------CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-CCCCccceEECCCCCEE
Confidence 11 35777 999988888994444334 89999988655444333 34679999999987789
Q ss_pred EEEeCCCCCCe-EEEEecCCCceE-----EEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC----eEEEec
Q psy13635 234 FWSDWNEKRPK-IERSLLNGGERV-----LLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN----RRELIN 303 (357)
Q Consensus 234 y~~d~~~~~~~-I~~~~~dg~~~~-----~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~----~~~i~~ 303 (357)
|+++.... . |...+++..... ..+ .....|.++++++.+.+||++....+.|..++++... ...+.
T Consensus 143 ~~~~~~~~--~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~- 218 (331)
T 3u4y_A 143 ILIDRSSA--NTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG- 218 (331)
T ss_dssp EEEEETTT--TEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE-
T ss_pred EEEecCCC--ceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc-
Confidence 99988754 5 665555432221 122 3345699999998777899999999999999986443 33332
Q ss_pred CCCCceEEEEEE--CCEEEEEeCCCCeEEEEeCccCce
Q psy13635 304 ENLPHVFGISLL--GDYVYWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 304 ~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~~~g~~ 339 (357)
....|.++++. +.++|+++...+.|..++..+|+.
T Consensus 219 -~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 219 -TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp -CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred -CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 34678888886 467999988888899999877766
No 72
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=1.6e-14 Score=133.67 Aligned_cols=222 Identities=14% Similarity=0.153 Sum_probs=152.2
Q ss_pred CCceeEEEEcCCCeEEEEeCC--CC--EEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSE--TN--KLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW 192 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~--~~--~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~ 192 (357)
..|.++++++ ++++|++... .+ +|.+++ +|... -++..... ....+..|.|+++|+. ++|||
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~-~g~~~--~~p~~~~~---------~~~~~~~p~gv~~d~~-g~L~v 82 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELT-QDGLI--PFPPQSGN---------AIITFDTVLGIKSDGN-GIVWM 82 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEE-TTEEE--ESCCCCSS---------CCCCCSCEEEEEECSS-SEEEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEEC-CCCee--cCCCcccC---------cccceeEeeEEEEcCC-CcEEE
Confidence 6899999996 6789999642 23 788887 55321 11110000 1345678999999965 78999
Q ss_pred EeCC-----CCeEEEEEcC-CCceEEEecC-----CCCCceEEEEeCCCCEEEEEeC---CCCCCeEEEEecCCCceEEE
Q psy13635 193 TDTG-----TDRIEVCRLE-GTHRKVLVNT-----DLVEPRAITLSPAHGYLFWSDW---NEKRPKIERSLLNGGERVLL 258 (357)
Q Consensus 193 td~~-----~~~I~~~~~~-g~~~~~~~~~-----~~~~P~giavd~~~g~Ly~~d~---~~~~~~I~~~~~dg~~~~~~ 258 (357)
+|.+ ..+|.+++++ |+..+.+... ....|+++++|+.+|.+|++|. .. ..|.+.+++......+
T Consensus 83 ~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~--~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 83 LDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK--AALIRVDLQTGLAARV 160 (343)
T ss_dssp EECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG--CEEEEEETTTCCEEEE
T ss_pred EcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC--CeEEEEECCCCCEEEE
Confidence 9987 5799999987 4434443321 1246899999988899999998 53 5888888864433333
Q ss_pred eeC--------------C---------------CCCceEEEEecCCCEEEEEeCCCCeEEEEeCC----CC--Ce-----
Q psy13635 259 VKD--------------R---------------LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD----GN--NR----- 298 (357)
Q Consensus 259 ~~~--------------~---------------l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d----G~--~~----- 298 (357)
... + ...|+||++++++..||+++...+++++++.+ +. ..
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T 2qe8_A 161 LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSK 240 (343)
T ss_dssp CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTT
T ss_pred ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcc
Confidence 211 0 12479999998777999999988899999742 21 00
Q ss_pred EEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecc-cCCceeeee
Q psy13635 299 RELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIER-SCTGVTRRR 355 (357)
Q Consensus 299 ~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~-l~~p~~i~~ 355 (357)
.... .....|.||+++ +|.+|++++..++|.+++..+|+...+.... +..|.++..
T Consensus 241 ~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 241 IERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp CEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEE
T ss_pred eEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEE
Confidence 0111 123479999998 6899999999999999998557654444332 667777653
No 73
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=8.7e-14 Score=127.32 Aligned_cols=217 Identities=13% Similarity=0.174 Sum_probs=159.6
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
...+..+...|+++++|+ .++|||++...+.|.+++.++.....+.... ...|.++++|+ ++
T Consensus 37 ~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----------------~~~~~~i~~~~-dg 98 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSH----------------KANPAAIKIHK-DG 98 (333)
T ss_dssp EEEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECS----------------SSSEEEEEECT-TS
T ss_pred eEEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCC----------------CCCcceEEECC-CC
Confidence 445556677899999995 6779999998999999998876554443211 13688999995 56
Q ss_pred eEEEEeCCC----CeEEEEEcCCCceEEEec--CCCCCceEEEEeCCCCEEEEEeCCC----CCCeEEEEecCCCceEEE
Q psy13635 189 NLYWTDTGT----DRIEVCRLEGTHRKVLVN--TDLVEPRAITLSPAHGYLFWSDWNE----KRPKIERSLLNGGERVLL 258 (357)
Q Consensus 189 ~lY~td~~~----~~I~~~~~~g~~~~~~~~--~~~~~P~giavd~~~g~Ly~~d~~~----~~~~I~~~~~dg~~~~~~ 258 (357)
+||++.... +.|.++++++.....+.. .....|+++++|+. |++|+++... ....|++++.++.....+
T Consensus 99 ~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 99 RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC-CCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 899998766 689999998876653432 23457999999985 8999998742 025899999887655544
Q ss_pred eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC--CCCeEEE----e-c-CCCCceEEEEEE-CCEEEEEeCCCCeE
Q psy13635 259 VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD--GNNRREL----I-N-ENLPHVFGISLL-GDYVYWTDWQRRSI 329 (357)
Q Consensus 259 ~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d--G~~~~~i----~-~-~~~~~p~gia~~-~~~ly~td~~~~~I 329 (357)
. ..+..|+++++++.+..||+++...+.|++++.+ |.....+ . . .....|.+++++ +|.+|+++...+.|
T Consensus 178 ~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v 256 (333)
T 2dg1_A 178 I-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRV 256 (333)
T ss_dssp E-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEE
T ss_pred e-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 3 3456799999997667899999888899999984 4433211 1 1 122479999998 58899999888899
Q ss_pred EEEeCccCceeEEEecc
Q psy13635 330 DRVNKITGNDREVIIER 346 (357)
Q Consensus 330 ~~~~~~~g~~~~~i~~~ 346 (357)
.++++ +|+....+...
T Consensus 257 ~~~d~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 257 LVFNK-RGYPIGQILIP 272 (333)
T ss_dssp EEECT-TSCEEEEEECT
T ss_pred EEECC-CCCEEEEEEcC
Confidence 99998 67776666543
No 74
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.66 E-value=1.8e-13 Score=120.59 Aligned_cols=200 Identities=12% Similarity=0.110 Sum_probs=147.8
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
.++.||++|+.++.||.+....++|.+++++|...+.+.. .++..+.||+++ .++.+++++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l----------------~g~~D~EGIa~~-~~g~~~vs~E~ 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPL----------------DFVKDLETIEYI-GDNQFVISDER 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEEC----------------SSCSSEEEEEEC-STTEEEEEETT
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEec----------------CCCCChHHeEEe-CCCEEEEEECC
Confidence 6799999999889999866668999999999887666532 234579999998 56788889988
Q ss_pred CCeEEEEEcCCCce-EE--EecCCC-CCc-----eEEEEeCCCCEEEEEeCCCCCCeEEEEe--cCCCceEEEe------
Q psy13635 197 TDRIEVCRLEGTHR-KV--LVNTDL-VEP-----RAITLSPAHGYLFWSDWNEKRPKIERSL--LNGGERVLLV------ 259 (357)
Q Consensus 197 ~~~I~~~~~~g~~~-~~--~~~~~~-~~P-----~giavd~~~g~Ly~~d~~~~~~~I~~~~--~dg~~~~~~~------ 259 (357)
.+++.++..+.... .. ...-.+ ..| .|||+||.+++||.+..... ..|+..+ +.+.....+-
T Consensus 90 ~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~~~~~ 168 (255)
T 3qqz_A 90 DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDKALQR 168 (255)
T ss_dssp TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECHHHHH
T ss_pred CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC-ceEEEEcccccCCceeeecchhhcc
Confidence 88888887654321 11 111111 234 89999999889999987743 4788887 1222223321
Q ss_pred eCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecC--------CCCceEEEEEE-CCEEEEEeCCCCeEE
Q psy13635 260 KDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINE--------NLPHVFGISLL-GDYVYWTDWQRRSID 330 (357)
Q Consensus 260 ~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~--------~~~~p~gia~~-~~~ly~td~~~~~I~ 330 (357)
...+..+.+|++|+..+++|+....++.+..++.+|.-+..+.-. .+.+|.||+++ +|+||+++-. +.+|
T Consensus 169 ~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y 247 (255)
T 3qqz_A 169 QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFY 247 (255)
T ss_dssp TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEE
T ss_pred ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEE
Confidence 113567899999999999999999999999999999844333221 25799999999 5899999644 6999
Q ss_pred EEeCc
Q psy13635 331 RVNKI 335 (357)
Q Consensus 331 ~~~~~ 335 (357)
++.+.
T Consensus 248 ~f~~~ 252 (255)
T 3qqz_A 248 RFTPQ 252 (255)
T ss_dssp EEEC-
T ss_pred EEEec
Confidence 99874
No 75
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.64 E-value=1.1e-12 Score=115.65 Aligned_cols=211 Identities=10% Similarity=0.085 Sum_probs=149.3
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
...+.|+++++.+++||......+.|++++++|.. ...+...+...++||+++. .+.+++++...+++.++..+..
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v---~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDL---IRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCE---EEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTT
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCE---EEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCC
Confidence 35799999999999999866668899999999653 2444456778999999994 6678889888899998876544
Q ss_pred ce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC-eEEEEE--cCCCceEEEec------CCCC
Q psy13635 150 KR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD-RIEVCR--LEGTHRKVLVN------TDLV 219 (357)
Q Consensus 150 ~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~-~I~~~~--~~g~~~~~~~~------~~~~ 219 (357)
.. ..+-...+.- + .........|||+|+.+++||++..... .|+..+ +.+....++.. ..+.
T Consensus 102 ~~i~~~~~~~~~~--~------~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 102 SEVKILKKIKIPL--Q------ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp CCEEEEEEEECCC--S------SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred Ceeeeeeeecccc--c------cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccC
Confidence 32 1111111100 0 0112234699999999999999887655 788876 22222233211 1356
Q ss_pred CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC--------CCCCceEEEEecCCCEEEEEeCCCCeEEEE
Q psy13635 220 EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD--------RLGWPNGITLDVDNEKLYWCDAKTDKIEMI 291 (357)
Q Consensus 220 ~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~--------~l~~P~giaid~~~~~lY~~d~~~~~I~~~ 291 (357)
.+.++++||.+|+||+..... ..+..++.+|.....+--. .+.+|.|||+| .+|+||++... +.++++
T Consensus 174 d~S~l~~dp~tg~lliLS~~s--~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d-~~G~lyIvsE~-n~~y~f 249 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHES--RALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMD-ASGNIYIVSEP-NRFYRF 249 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTT--TEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEEC-TTCCEEEEETT-TEEEEE
T ss_pred CceeEEEcCCCCeEEEEECCC--CeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEEC-CCCCEEEEcCC-ceEEEE
Confidence 799999999999999998875 5999999999854443222 25689999999 57889999765 599999
Q ss_pred eCCCC
Q psy13635 292 DFDGN 296 (357)
Q Consensus 292 ~~dG~ 296 (357)
..+++
T Consensus 250 ~~~~~ 254 (255)
T 3qqz_A 250 TPQSS 254 (255)
T ss_dssp EC---
T ss_pred EecCC
Confidence 87543
No 76
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.64 E-value=2.9e-14 Score=132.61 Aligned_cols=233 Identities=13% Similarity=0.091 Sum_probs=156.8
Q ss_pred EEEEeCCcCCceeEEEEcCCCe-EEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC-
Q psy13635 109 HNVITNGLITPDGLAIDWLTEK-LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV- 186 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~-ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~- 186 (357)
.+++..++..|.+|++++ .++ ||+++. .++|.+++.+|...+.+. ++ |. + .......|.||++++.
T Consensus 10 ~~~va~~l~~P~~i~~~p-dG~~l~V~e~-~G~i~~~~~~g~~~~~~~--~~--~~-v-----~~~g~~g~~gia~~pdf 77 (353)
T 2g8s_A 10 VEVLQDKLDHPWALAFLP-DNHGMLITLR-GGELRHWQAGKGLSAPLS--GV--PD-V-----WAHGQGGLLDVVLAPDF 77 (353)
T ss_dssp EEEEEEEESSEEEEEECS-TTCCEEEEET-TTEEEEEETTTEECCCCB--SC--CC-C-----CCSTTCSEEEEEECTTH
T ss_pred EEEEECCCCCcEEEEEcC-CCCEEEEEeC-CceEEEEeCCCceeeEec--CC--cc-c-----ccCCCCCceeEEECCCC
Confidence 556667899999999997 556 999997 489999988775332211 00 00 0 0123346899999986
Q ss_pred --CCeEEEEeCC-------CCeEEEEEcCCC-----ceEEEecC------CCCCceEEEEeCCCCEEEEEeCCCC-----
Q psy13635 187 --ARNLYWTDTG-------TDRIEVCRLEGT-----HRKVLVNT------DLVEPRAITLSPAHGYLFWSDWNEK----- 241 (357)
Q Consensus 187 --~~~lY~td~~-------~~~I~~~~~~g~-----~~~~~~~~------~~~~P~giavd~~~g~Ly~~d~~~~----- 241 (357)
++.||+++.. ..+|.+++.++. ..++++.. ....|.+|+++|. |.||++.....
T Consensus 78 ~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~Gd~~~~~~~ 156 (353)
T 2g8s_A 78 AQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGK-GYLFIALGENNQRPTA 156 (353)
T ss_dssp HHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSS-SEEEEEECCTTCGGGG
T ss_pred CCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCC-CcEEEEECCCCCCCcc
Confidence 8999999764 358999887643 23344321 2345889999985 89999974321
Q ss_pred ------CCeEEEEecCCCc------------eEEEeeCCCCCceEEEEecCCCEEEEEeCCCC---eEEEEeCCCCC---
Q psy13635 242 ------RPKIERSLLNGGE------------RVLLVKDRLGWPNGITLDVDNEKLYWCDAKTD---KIEMIDFDGNN--- 297 (357)
Q Consensus 242 ------~~~I~~~~~dg~~------------~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~---~I~~~~~dG~~--- 297 (357)
.++|.|++.+|+. ..+++..++.+|.|+++|+.+++||++|.+.+ .|.++...+.-
T Consensus 157 q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp 236 (353)
T 2g8s_A 157 QDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWP 236 (353)
T ss_dssp GCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTT
T ss_pred CCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCC
Confidence 3689999999862 34455678899999999976899999998753 55555432210
Q ss_pred --------------------eEEEe-----cCCCCceEEEEEE--------CCEEEEEeCCCCeEEEEeCccCcee--EE
Q psy13635 298 --------------------RRELI-----NENLPHVFGISLL--------GDYVYWTDWQRRSIDRVNKITGNDR--EV 342 (357)
Q Consensus 298 --------------------~~~i~-----~~~~~~p~gia~~--------~~~ly~td~~~~~I~~~~~~~g~~~--~~ 342 (357)
..... ......|.|+++. .|.+|++++..++|.+++..+++.. +.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~ 316 (353)
T 2g8s_A 237 LATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGR 316 (353)
T ss_dssp TBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEE
T ss_pred CccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEE
Confidence 00000 0112368899996 3899999999999999998554422 22
Q ss_pred Eecc-cCCceeee
Q psy13635 343 IIER-SCTGVTRR 354 (357)
Q Consensus 343 i~~~-l~~p~~i~ 354 (357)
+..+ ...|.++.
T Consensus 317 ~~~~~~~rp~~v~ 329 (353)
T 2g8s_A 317 ILTDRGQRIRDVR 329 (353)
T ss_dssp ESGGGCCCEEEEE
T ss_pred cccCCCCceeEEE
Confidence 3333 34677765
No 77
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.64 E-value=1.4e-13 Score=130.51 Aligned_cols=285 Identities=11% Similarity=0.031 Sum_probs=184.7
Q ss_pred CeEEEEEeC------CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC---------CCCeEEEEEcCCCCc
Q psy13635 41 AQMLLFATS------KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTFDGNNV 105 (357)
Q Consensus 41 ~~~l~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~~ 105 (357)
...+|+++. +.|..+|+.. .+....++....| ++++++++.+||+++. .++.|..++......
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t-~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGST-GRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTT-TEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCC-CEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 346788876 6799999976 3444444444578 9999999999999985 356789998877641
Q ss_pred ceeEEEEeC---C---cCCceeEEEEcCCCeEEEEeCC-CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCC
Q psy13635 106 GSKHNVITN---G---LITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHP 178 (357)
Q Consensus 106 ~~~~~~~~~---~---~~~p~glavd~~~~~ly~td~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p 178 (357)
..++... . ...|.++++++.++.||+++.. .+.|.++++.......-+.. |
T Consensus 162 --v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--------------------~ 219 (426)
T 3c75_H 162 --IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--------------------P 219 (426)
T ss_dssp --EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--------------------C
T ss_pred --EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc--------------------C
Confidence 2233222 1 2579999999999999999975 78999999876543222211 1
Q ss_pred ceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEe---cCCCCCce--EEEEeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 179 DGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLV---NTDLVEPR--AITLSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 179 ~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~---~~~~~~P~--giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
.+..+.+.+++.|++....+++..++.......... ..--..|. .+++++..+++|++... +.++.++..+.
T Consensus 220 g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~---g~V~ViD~~~~ 296 (426)
T 3c75_H 220 DCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT---GKIFQADLTAE 296 (426)
T ss_dssp SEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT---SEEEEEEECSS
T ss_pred CceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC---CcEEEEeccCC
Confidence 112222233455555555555555555322211110 01112342 24557777788887654 58999998765
Q ss_pred ceEEEeeCC---------CCCceE---EEEecCCCEEEEEeC---------CCCeEEEEeCCCCCeEEEecCCCCceEEE
Q psy13635 254 ERVLLVKDR---------LGWPNG---ITLDVDNEKLYWCDA---------KTDKIEMIDFDGNNRRELINENLPHVFGI 312 (357)
Q Consensus 254 ~~~~~~~~~---------l~~P~g---iaid~~~~~lY~~d~---------~~~~I~~~~~dG~~~~~i~~~~~~~p~gi 312 (357)
....+-.-. -..|.| +++++.+++||+++. ..+.|..+|........-+. ....|.+|
T Consensus 297 ~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~-vg~~P~gi 375 (426)
T 3c75_H 297 GATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE-LGHEIDSI 375 (426)
T ss_dssp CEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEE
T ss_pred ceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE-CCCCcCeE
Confidence 543321100 013544 899999999999974 23579999987655433332 12369999
Q ss_pred EEE--CC-EEEEEeCCCCeEEEEeCccCceeEEEecccCCceee
Q psy13635 313 SLL--GD-YVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTR 353 (357)
Q Consensus 313 a~~--~~-~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i 353 (357)
++. +. .+|++++.++.|..+|..+++....|..-...|..+
T Consensus 376 a~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i 419 (426)
T 3c75_H 376 NVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQII 419 (426)
T ss_dssp EECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEE
T ss_pred EEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEE
Confidence 997 45 899999999999999999999998884444566554
No 78
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.63 E-value=7.4e-12 Score=117.19 Aligned_cols=285 Identities=8% Similarity=-0.025 Sum_probs=186.4
Q ss_pred CeEEEEEeC--C----cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC---------CCCeEEEEEcCCCCc
Q psy13635 41 AQMLLFATS--K----DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTFDGNNV 105 (357)
Q Consensus 41 ~~~l~~~~~--~----~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~~ 105 (357)
..++|.++. . .|.++|.... +....++.-..| ++++++++..+|+++. .++.|..++......
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~-~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~ 109 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSG-SILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP 109 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCC-eEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE
Confidence 355666663 2 6788998763 333334444567 9999999999999984 356788888875431
Q ss_pred ceeEEEEeC---C---cCCceeEEEEcCCCeEEEEeCC-CCEEEEEEcCCCceEEE-EecCCCCcceeeeeccCcccccC
Q psy13635 106 GSKHNVITN---G---LITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVL-YWEDIDQPRAIASYKLPTIEVEH 177 (357)
Q Consensus 106 ~~~~~~~~~---~---~~~p~glavd~~~~~ly~td~~-~~~I~~~~~~g~~~~~~-~~~~~~~p~~i~~~~~~~~~~~~ 177 (357)
..++... . ...|.++++++.++.||+++.. .++|.+++ ........ + ..
T Consensus 110 --~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i--------------------~~ 166 (373)
T 2mad_H 110 --IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLL--------------------SS 166 (373)
T ss_pred --EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEc--------------------CC
Confidence 1222111 0 2469999999999999999865 68899998 65433211 1 13
Q ss_pred CceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec-C--CCCCce--EEEEeCCCCEEEEEeCCCCCCeEEEEecCC
Q psy13635 178 PDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN-T--DLVEPR--AITLSPAHGYLFWSDWNEKRPKIERSLLNG 252 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~-~--~~~~P~--giavd~~~g~Ly~~d~~~~~~~I~~~~~dg 252 (357)
|.++.+.+..++.|++....+++..++.+|+....... . ....|. ..++.+..+.+||.... +.+..+++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~v~vid~~~ 243 (373)
T 2mad_H 167 PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYS---GKILQADISA 243 (373)
T ss_pred CceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCC---ceEEEEeccC
Confidence 44455666677888888888888888884443322110 0 112231 22345556777777643 5888888876
Q ss_pred CceEEEee---------CCCCCceE---EEEecCCCEEEEEeC---------CCCeEEEEeCCCCCeEEEecCCCCceEE
Q psy13635 253 GERVLLVK---------DRLGWPNG---ITLDVDNEKLYWCDA---------KTDKIEMIDFDGNNRRELINENLPHVFG 311 (357)
Q Consensus 253 ~~~~~~~~---------~~l~~P~g---iaid~~~~~lY~~d~---------~~~~I~~~~~dG~~~~~i~~~~~~~p~g 311 (357)
.....+-. .....|.| +++++.+++||++.. ..+.|+.+|........-+. ....|.+
T Consensus 244 ~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~ 322 (373)
T 2mad_H 244 AGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDA 322 (373)
T ss_pred CcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCe
Confidence 54332211 01123555 889988999999864 24689999987655433332 2346999
Q ss_pred EEEE--CC-EEEEEeCCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 312 ISLL--GD-YVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 312 ia~~--~~-~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
+++. +. .+|.+++..+.|..+|..+++....+..-...|.+|.
T Consensus 323 i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~~ 368 (373)
T 2mad_H 323 ISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLS 368 (373)
T ss_pred EEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEEE
Confidence 9986 45 6888888889999999989998888665557788775
No 79
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.63 E-value=2.9e-13 Score=124.31 Aligned_cols=220 Identities=14% Similarity=0.139 Sum_probs=157.3
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
+.+.......++|+++|+.++.+||+|...++|.+++.++.....+.. . ..|.++++++ .+
T Consensus 41 ~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~-----------------~~v~~i~~~~-dg 101 (326)
T 2ghs_A 41 RVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL-P-----------------FMGSALAKIS-DS 101 (326)
T ss_dssp EEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC-S-----------------SCEEEEEEEE-TT
T ss_pred EEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC-C-----------------CcceEEEEeC-CC
Confidence 334444566789999998889999999999999999998765543321 1 2578888885 56
Q ss_pred eEEEEeCCCCeEEEEEcCCCceEEEecC----CCCCceEEEEeCCCCEEEEEeCCC----CCCeEEEEecCCCceEEEee
Q psy13635 189 NLYWTDTGTDRIEVCRLEGTHRKVLVNT----DLVEPRAITLSPAHGYLFWSDWNE----KRPKIERSLLNGGERVLLVK 260 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g~~~~~~~~~----~~~~P~giavd~~~g~Ly~~d~~~----~~~~I~~~~~dg~~~~~~~~ 260 (357)
++|++.. +.|.++++++...+.+... ....|+++++|+. |++|+++... ..+.|++++ +|. ...+ .
T Consensus 102 ~l~v~~~--~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~-~g~-~~~~-~ 175 (326)
T 2ghs_A 102 KQLIASD--DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVA-KGK-VTKL-F 175 (326)
T ss_dssp EEEEEET--TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT-SCEEEEEEETTCCTTCEEEEEEE-TTE-EEEE-E
T ss_pred eEEEEEC--CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCcCCCCceEEEEEe-CCc-EEEe-e
Confidence 7888763 4699999875555444332 1246899999985 7899987531 125899998 543 2223 2
Q ss_pred CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC---C-C--CeEEEec--CCCCceEEEEEE-CCEEEEEeCCCCeEEE
Q psy13635 261 DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD---G-N--NRRELIN--ENLPHVFGISLL-GDYVYWTDWQRRSIDR 331 (357)
Q Consensus 261 ~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d---G-~--~~~~i~~--~~~~~p~gia~~-~~~ly~td~~~~~I~~ 331 (357)
.....|+++++++++..||+++...+.|++++.+ | . ..+.+.. .....|.|++++ +|.+|++.+..+.|.+
T Consensus 176 ~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 176 ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDR 255 (326)
T ss_dssp EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEE
T ss_pred CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEE
Confidence 3456799999998777899999988999999975 4 2 1222321 234579999998 5899999988889999
Q ss_pred EeCccCceeEEEecccCCceeee
Q psy13635 332 VNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 332 ~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
+++ +|+....+..+...|..+.
T Consensus 256 ~d~-~g~~~~~i~~~~~~~~~~a 277 (326)
T 2ghs_A 256 YDT-DGNHIARYEVPGKQTTCPA 277 (326)
T ss_dssp ECT-TCCEEEEEECSCSBEEEEE
T ss_pred ECC-CCCEEEEEECCCCCcEEEE
Confidence 998 7887776665555565554
No 80
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.62 E-value=2.4e-12 Score=118.33 Aligned_cols=262 Identities=10% Similarity=0.038 Sum_probs=167.3
Q ss_pred eecCCCCeEEEEEeC----CcEEEEEcCCCCcceEe---ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcce
Q psy13635 35 LSHHVAAQMLLFATS----KDIRIANLSRPLKPVTI---IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGS 107 (357)
Q Consensus 35 ~~~~~~~~~l~~~~~----~~i~~~~~~~~~~~~~~---~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 107 (357)
++.++... |++++. ..|+.++++++ ..+.+ ......|.++++++++..||+++..++.|...+++......
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~ 122 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQ-TAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALT 122 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEETT-EEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEE
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecCC-cEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCee
Confidence 34444444 666654 47888888653 22222 23566889999999999999999888888877775322111
Q ss_pred eEEEEeC-C--------cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCceEEEEecCCCCcceeeeeccCcccccC
Q psy13635 108 KHNVITN-G--------LITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKVLYWEDIDQPRAIASYKLPTIEVEH 177 (357)
Q Consensus 108 ~~~~~~~-~--------~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~ 177 (357)
....... + ...|.++++++.++ +|+++...++|.+++++ ......+.... ......
T Consensus 123 ~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-------------~~~g~~ 188 (347)
T 3hfq_A 123 LTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLT-------------MEAGFG 188 (347)
T ss_dssp EEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEE-------------CCTTCC
T ss_pred ecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEE-------------cCCCCC
Confidence 1112211 1 12477899998666 99999999999999887 22222221100 111236
Q ss_pred CceEEEeCCCCeEEEEeCCCCeEEEEEcCC--CceEE---EecCC-----CCCceEEEEeCCCCEEEEEeCCCCCCeEEE
Q psy13635 178 PDGVAVDWVARNLYWTDTGTDRIEVCRLEG--THRKV---LVNTD-----LVEPRAITLSPAHGYLFWSDWNEKRPKIER 247 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~~I~~~~~~g--~~~~~---~~~~~-----~~~P~giavd~~~g~Ly~~d~~~~~~~I~~ 247 (357)
|.++++++.++.||+++...+.|.+.+++. ..... +.... ...|.+++++|.+.+||+++... +.|..
T Consensus 189 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~--~~v~v 266 (347)
T 3hfq_A 189 PRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY--NTLAV 266 (347)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT--TEEEE
T ss_pred CceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC--CEEEE
Confidence 888999988888999999888888887763 22211 11111 14589999999877899998874 47777
Q ss_pred EecCCC-ceEE--EeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC--CCCeEEEec-CCCCceEEEEE
Q psy13635 248 SLLNGG-ERVL--LVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD--GNNRRELIN-ENLPHVFGISL 314 (357)
Q Consensus 248 ~~~dg~-~~~~--~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d--G~~~~~i~~-~~~~~p~gia~ 314 (357)
.+++.. .... .+......|.++++++++..||+++...+.|..++.+ +.....+.. ..++.|.-+..
T Consensus 267 ~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~~~~~p~p~~~~~ 339 (347)
T 3hfq_A 267 FAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQKDVTVPEGVCVRF 339 (347)
T ss_dssp EEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEECTTEEEEEE
T ss_pred EEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecccceecCCCcEEEe
Confidence 776522 1222 2223345799999998888899999988888777443 333333322 13455555443
No 81
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.61 E-value=4.4e-13 Score=123.35 Aligned_cols=233 Identities=15% Similarity=0.089 Sum_probs=161.3
Q ss_pred eEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEec-CCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 108 KHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-DIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 108 ~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
..+++..++..|.+|++.+ ++.||+++...++|.+++.++...+.+... .. .......|.|||+++.
T Consensus 23 ~~~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v-----------~~~g~~GllGia~~Pd 90 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGV-----------SPSGEGGLLGIALSPD 90 (347)
T ss_dssp EEEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTC-----------CCBTTBSEEEEEECTT
T ss_pred eeEEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCce-----------eecCCCCceeeEeccc
Confidence 4668889999999999996 678999999889999998764443333211 10 1234568999999984
Q ss_pred ---CCeEEEEeC--CCCeEEEEEcCCC--------ceEEEec----CCCCCceEEEEeCCCCEEEEEeCC----------
Q psy13635 187 ---ARNLYWTDT--GTDRIEVCRLEGT--------HRKVLVN----TDLVEPRAITLSPAHGYLFWSDWN---------- 239 (357)
Q Consensus 187 ---~~~lY~td~--~~~~I~~~~~~g~--------~~~~~~~----~~~~~P~giavd~~~g~Ly~~d~~---------- 239 (357)
++.||++.. ..++|.++.+++. ..++++. .....+..|+++|+ |.||++.-.
T Consensus 91 f~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD-G~Lyvt~Gd~~~~~~~qd~ 169 (347)
T 3das_A 91 YASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD-KMLYAGTGESGDTGLSQDR 169 (347)
T ss_dssp HHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT-SCEEEECBCTTCGGGTTCT
T ss_pred cccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC-CCEEEEECCCCCCccccCC
Confidence 789998753 4569999988762 1333332 12345778999985 899999531
Q ss_pred -CCCCeEEEEecCCCc-------eEEEeeCCCCCceEEEEecCCCEEEEEeCCCC---eEEEEeCCCCC-------e---
Q psy13635 240 -EKRPKIERSLLNGGE-------RVLLVKDRLGWPNGITLDVDNEKLYWCDAKTD---KIEMIDFDGNN-------R--- 298 (357)
Q Consensus 240 -~~~~~I~~~~~dg~~-------~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~---~I~~~~~dG~~-------~--- 298 (357)
...++|.|++.+|+. ..+++..++.+|.|+++|+ ++.||++|.+.. .|.++...+.- .
T Consensus 170 ~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~ 248 (347)
T 3das_A 170 KSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGG 248 (347)
T ss_dssp TCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCC
T ss_pred CCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECC-CCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCC
Confidence 114799999999871 1346667899999999997 799999998653 56666432210 0
Q ss_pred ------EEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCc---eeEEEecc-cCCceeee
Q psy13635 299 ------RELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGN---DREVIIER-SCTGVTRR 354 (357)
Q Consensus 299 ------~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~---~~~~i~~~-l~~p~~i~ 354 (357)
..........|.||++.++.+|.++....+|+++....++ ..+.++.+ ...|.+|.
T Consensus 249 ~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~ 314 (347)
T 3das_A 249 SGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVA 314 (347)
T ss_dssp TTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEE
T ss_pred ccccCCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEE
Confidence 0000001236899999999999999999999998874432 22444443 45677664
No 82
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.61 E-value=1.5e-13 Score=131.86 Aligned_cols=253 Identities=13% Similarity=0.115 Sum_probs=169.6
Q ss_pred CcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC------CcCCceeEEEEcC---CCeE
Q psy13635 61 LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN------GLITPDGLAIDWL---TEKL 131 (357)
Q Consensus 61 ~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~------~~~~p~glavd~~---~~~l 131 (357)
-+.+.+.+.+..|++|++++ +++||+++...++|++++.++.. ......+.. +...+.|||+++. ++.|
T Consensus 17 f~~~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~-~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~l 94 (454)
T 1cru_A 17 FDKKVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGS-VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYI 94 (454)
T ss_dssp SCEEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCC-EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEE
T ss_pred eEEEEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCc-EeEEecCCccccccCCCCceeEEEECCCcCcCCEE
Confidence 45566677899999999998 57899999988889999875332 111112222 2345669999986 8999
Q ss_pred EEEeCC------------CCEEEEEEcCCC-----ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 132 YWTDSE------------TNKLEVSSLDGK-----KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 132 y~td~~------------~~~I~~~~~~g~-----~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
|+++.. ..+|.|+++++. ..++++.. +|....+.+.+|++++ .|+||++.
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~------------~p~~~~H~~~~l~f~p-DG~Lyv~~ 161 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAG------------LPSSKDHQSGRLVIGP-DQKIYYTI 161 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEE------------ECCCSSCCEEEEEECT-TSCEEEEE
T ss_pred EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEc------------CCCCCCCCCCeEeECC-CCeEEEEE
Confidence 999853 358999887542 12333321 1233457799999996 67899984
Q ss_pred CC--------------------------------CCeEEEEEcCCC-----------ceEEEecCCCCCceEEEEeCCCC
Q psy13635 195 TG--------------------------------TDRIEVCRLEGT-----------HRKVLVNTDLVEPRAITLSPAHG 231 (357)
Q Consensus 195 ~~--------------------------------~~~I~~~~~~g~-----------~~~~~~~~~~~~P~giavd~~~g 231 (357)
.. .++|.|+++||+ ..++ ...++.+|.|+++|+ +|
T Consensus 162 Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei-~a~G~RNp~gla~dp-~G 239 (454)
T 1cru_A 162 GDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHI-YTLGHRNPQGLAFTP-NG 239 (454)
T ss_dssp CCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSE-EEBCCSEEEEEEECT-TS
T ss_pred CCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceE-EEECCCCcceEEECC-CC
Confidence 32 358999999997 3343 345789999999999 69
Q ss_pred EEEEEeCCCC-CCeEEEEec---------CCC---------------------------c------------------eE
Q psy13635 232 YLFWSDWNEK-RPKIERSLL---------NGG---------------------------E------------------RV 256 (357)
Q Consensus 232 ~Ly~~d~~~~-~~~I~~~~~---------dg~---------------------------~------------------~~ 256 (357)
.||+++.+.. .-.|..+.. .|. . ..
T Consensus 240 ~L~~~d~g~~~~dein~i~~G~nYGWP~~~G~~~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~p~~~~~~~~~~~~~~ 319 (454)
T 1cru_A 240 KLLQSEQGPNSDDEINLIVKGGNYGWPNVAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVP 319 (454)
T ss_dssp CEEEEEECSSSCEEEEECCTTCBCCTTTCSSSSSCSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEECGGGCCCSSBCC
T ss_pred CEEEEecCCCCCeEEEEecCCCCCCCCceecCcccCccccccccccccccccccccCCcccCccccccccccccCCCcCC
Confidence 9999997642 012222211 010 0 00
Q ss_pred EEee----------------------CCCCCceEEEEecC--------CCEEEEEeCCCCeEEEEeCCCCC--e----EE
Q psy13635 257 LLVK----------------------DRLGWPNGITLDVD--------NEKLYWCDAKTDKIEMIDFDGNN--R----RE 300 (357)
Q Consensus 257 ~~~~----------------------~~l~~P~giaid~~--------~~~lY~~d~~~~~I~~~~~dG~~--~----~~ 300 (357)
.++. .....|.|+++... .+.||+++...++|.++.+++.+ . ..
T Consensus 320 P~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ap~G~~fy~g~~~~~~~~~g~lfv~~~~~~~i~~v~l~~~g~~~~~~~~~ 399 (454)
T 1cru_A 320 PLKTLYTVQDTYNYNDPTCGEMTYICWPTVAPSSAYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLDPTYSTTYDDAVP 399 (454)
T ss_dssp CSEEECCCCTTCCSCCGGGTTCGGGGSSCCCBCCCEECCCCTTCCTTCTTEEEEEBSSSCCEEEEEECTTSSSEEEEEEE
T ss_pred CceecccccccccccccccccccccccCccCcceeEEeCCCCccCcccCCcEEEeecCCCEEEEEEECCCCCeeeeeeee
Confidence 0000 01234788988533 37899999999999999987532 2 22
Q ss_pred EecCCCCceEEEEEE-CCE-EEEEeCCCCeEEE
Q psy13635 301 LINENLPHVFGISLL-GDY-VYWTDWQRRSIDR 331 (357)
Q Consensus 301 i~~~~~~~p~gia~~-~~~-ly~td~~~~~I~~ 331 (357)
++ .....|.+|++. +|. ||+++...+.+++
T Consensus 400 ~~-~~~~R~~dv~~gpDG~~Lyv~~d~~G~i~~ 431 (454)
T 1cru_A 400 MF-KSNNRYRDVIASPDGNVLYVLTDTAGNVQK 431 (454)
T ss_dssp ES-CCSSCEEEEEECTTSSCEEEEECSSCCEEC
T ss_pred ec-ccCCCceeEEECCCCCEEEEEECCCCCCcc
Confidence 33 345699999998 576 9999988888765
No 83
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.57 E-value=3.6e-11 Score=112.07 Aligned_cols=241 Identities=16% Similarity=0.123 Sum_probs=180.9
Q ss_pred EEeecCCCCeEEEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 33 YALSHHVAAQMLLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
.+++-++...+++++. .+.|+.+|+... +..........+.++++++.++.||++...++.|+..++.+.. ...
T Consensus 35 ~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~---~~~ 110 (391)
T 1l0q_A 35 MGAVISPDGTKVYVANAHSNDVSIIDTATN-NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT---VAG 110 (391)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEE
T ss_pred ceEEECCCCCEEEEECCCCCeEEEEECCCC-eEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCe---EEE
Confidence 4556666667777765 567999998663 3333444444899999999999999999888999999998764 222
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
.+. .-..|.++++++.++.||++....+.|...++...........+ ..|.++++++.++.|
T Consensus 111 ~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~~dg~~l 172 (391)
T 1l0q_A 111 TVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-----------------RSPKGIAVTPDGTKV 172 (391)
T ss_dssp EEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-----------------SSEEEEEECTTSSEE
T ss_pred EEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-----------------CCcceEEECCCCCEE
Confidence 332 33578999999888889999998999999998765443333221 357889999888899
Q ss_pred EEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEE
Q psy13635 191 YWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGIT 270 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gia 270 (357)
|++....+.|...++.......... ....|.+++++|.+.+||.+......+.|...++........+... ..|.+++
T Consensus 173 ~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~ 250 (391)
T 1l0q_A 173 YVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIA 250 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEE
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC-CCccEEE
Confidence 9999888899999988665444443 2357899999998889999986211369999998866555544443 4689999
Q ss_pred EecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 271 LDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 271 id~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
+++.+..||++....+.|...+.....
T Consensus 251 ~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 251 VTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 998888899998888999999986543
No 84
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.57 E-value=5.8e-12 Score=111.62 Aligned_cols=197 Identities=15% Similarity=0.110 Sum_probs=142.6
Q ss_pred CcEEEEEEEccCCEEEEEeC--CCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 71 EEGAAIDYYYKKSMVCWTDH--GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
..|.|++++++ +.||++.. ..+.|..+++..... ..++.......++|++++ ++.||+++...+++.+++...
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v--~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKV--ENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCE--EEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTT
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCE--EEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCC
Confidence 36899999975 79999975 467999999987641 123323333466788887 789999999999999999874
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC-----CCCCceE
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT-----DLVEPRA 223 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~-----~~~~P~g 223 (357)
.....-+..+ .|.|..+.+.+++||+++ +.++|..+|+.......-+.- ....|++
T Consensus 96 ~~v~~~i~~g------------------~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 96 LSNIKNFTHQ------------------MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp TEEEEEEECC------------------SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred CcEEEEEECC------------------CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 4322222111 144444444588999999 678999999987443322221 2346889
Q ss_pred EEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-C------------CCCceEEEEecCCCEEEEEeCCCCeEEE
Q psy13635 224 ITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-R------------LGWPNGITLDVDNEKLYWCDAKTDKIEM 290 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-~------------l~~P~giaid~~~~~lY~~d~~~~~I~~ 290 (357)
+.+. +|+||.+.+.. ..|.++++........+.- + ...|+||++|+.++++|++....++++.
T Consensus 157 le~~--dg~lyvn~~~~--~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 157 LEYI--NGEVWANIWQT--DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE 232 (266)
T ss_dssp EEEE--TTEEEEEETTS--SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred EEEE--CCEEEEecCCC--CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence 9988 58999999885 4999999976655444432 1 2468999999999999999999999999
Q ss_pred EeCCC
Q psy13635 291 IDFDG 295 (357)
Q Consensus 291 ~~~dG 295 (357)
+++..
T Consensus 233 i~l~~ 237 (266)
T 2iwa_A 233 IKLHL 237 (266)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 98744
No 85
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.56 E-value=7.1e-11 Score=115.97 Aligned_cols=300 Identities=13% Similarity=0.108 Sum_probs=207.3
Q ss_pred EEeecCCCCeEEEEEeC-CcEEEEEc--CCCCcceEeccCCCcEEEEEEEc----cCCEEEEEeCCCCeEEEEEcCCCCc
Q psy13635 33 YALSHHVAAQMLLFATS-KDIRIANL--SRPLKPVTIIKDLEEGAAIDYYY----KKSMVCWTDHGTEMISCCTFDGNNV 105 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~-~~i~~~~~--~~~~~~~~~~~~~~~~~~i~~d~----~~~~ly~~d~~~~~I~~~~~~g~~~ 105 (357)
.+++.++...+|+.++. +.|..+|+ .. .+....+.....|.+++|++ ++..||.++...+.|..++.....
T Consensus 182 ~~v~~spdg~~l~v~~~d~~V~v~D~~~~t-~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~- 259 (543)
T 1nir_A 182 HISRMSASGRYLLVIGRDARIDMIDLWAKE-PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE- 259 (543)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEETTSSS-CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-
T ss_pred ceEEECCCCCEEEEECCCCeEEEEECcCCC-CcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc-
Confidence 46667777788888885 56899999 33 23333344566899999999 899999999878888888876553
Q ss_pred ceeEEEEeC-C----------cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc-eEE-EEecCCCCcceeeeeccCc
Q psy13635 106 GSKHNVITN-G----------LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK-RKV-LYWEDIDQPRAIASYKLPT 172 (357)
Q Consensus 106 ~~~~~~~~~-~----------~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~-~~~-~~~~~~~~p~~i~~~~~~~ 172 (357)
....+.. + -..+.++++.+.++.+|++....++|..++..... ..+ .+..
T Consensus 260 --~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~--------------- 322 (543)
T 1nir_A 260 --PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA--------------- 322 (543)
T ss_dssp --EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC---------------
T ss_pred --cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc---------------
Confidence 2222221 1 12567899998889999999999999999986532 221 1111
Q ss_pred ccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec-CCCCCc-eEEEE-eCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 173 IEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN-TDLVEP-RAITL-SPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 173 ~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~-~~~~~P-~giav-d~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
-..|.++++|+.++++|++....++|.+.+.........+. ....+| .+..+ +|..|.+|.+..... ..|...+
T Consensus 323 --~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d-~~V~v~d 399 (543)
T 1nir_A 323 --APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD-GSISLIG 399 (543)
T ss_dssp --CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS-SEEEEEE
T ss_pred --CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC-ceEEEEE
Confidence 13689999999888899999888999999987554433333 222233 35544 677789998876322 5888888
Q ss_pred cCC-------CceEEEeeCCCCCceEEEEecCCCEEEEEeCC------CCeEEEEeCCCCCeE-EEe--------cCCCC
Q psy13635 250 LNG-------GERVLLVKDRLGWPNGITLDVDNEKLYWCDAK------TDKIEMIDFDGNNRR-ELI--------NENLP 307 (357)
Q Consensus 250 ~dg-------~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~------~~~I~~~~~dG~~~~-~i~--------~~~~~ 307 (357)
.+. ......+...-..+..+++.+.+.+||+.... .+.|..++.+..... ..+ .+...
T Consensus 400 ~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~ 479 (543)
T 1nir_A 400 TDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAK 479 (543)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCC
T ss_pred eCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCC
Confidence 875 23333333333456789999888888776521 458999998643332 332 23456
Q ss_pred ceEEEEEE--CCEEEEEeCC----CCeEEEEeCccCceeEEEec-ccCCceeee
Q psy13635 308 HVFGISLL--GDYVYWTDWQ----RRSIDRVNKITGNDREVIIE-RSCTGVTRR 354 (357)
Q Consensus 308 ~p~gia~~--~~~ly~td~~----~~~I~~~~~~~g~~~~~i~~-~l~~p~~i~ 354 (357)
.+..+++. +..+|++.|. .+.|..+|..+++....|.. .+..|.|..
T Consensus 480 ~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~~~p~g~~ 533 (543)
T 1nir_A 480 RVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGKF 533 (543)
T ss_dssp EEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTCCSEEEEE
T ss_pred ceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCCccCCCeee
Confidence 77888885 6889999873 58899999989998888763 577777653
No 86
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.56 E-value=1.6e-11 Score=111.85 Aligned_cols=263 Identities=11% Similarity=0.019 Sum_probs=174.5
Q ss_pred EeecCCCCeEEEEEeC--CcEEEEEcC--CCCcceE--eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcC-CCCcc
Q psy13635 34 ALSHHVAAQMLLFATS--KDIRIANLS--RPLKPVT--IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD-GNNVG 106 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~--~~i~~~~~~--~~~~~~~--~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~ 106 (357)
+++-++...+|+++.. ..|..++++ ++ .... .......|.++++++.+..||+++..++.|..++++ |..
T Consensus 42 ~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-- 118 (343)
T 1ri6_A 42 PMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG-ALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP-- 118 (343)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEEECTTTC-CEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE--
T ss_pred eEEECCCCCEEEEeecCCCeEEEEEecCCCC-ceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc--
Confidence 3455556677888776 578887776 32 2222 222334789999999989999999888888888874 221
Q ss_pred eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC-CceEEEE--ecCCCCcceeeeeccCcccccCCceEEE
Q psy13635 107 SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG-KKRKVLY--WEDIDQPRAIASYKLPTIEVEHPDGVAV 183 (357)
Q Consensus 107 ~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g-~~~~~~~--~~~~~~p~~i~~~~~~~~~~~~p~glav 183 (357)
............|.++++++.++.||+++...++|.+++++. .....+. ... ......|.++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 185 (343)
T 1ri6_A 119 VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVT-------------TVEGAGPRHMVF 185 (343)
T ss_dssp EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEE-------------CSTTCCEEEEEE
T ss_pred ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccc-------------cCCCCCcceEEE
Confidence 112222344557999999998889999997788999988865 3222211 000 111136888999
Q ss_pred eCCCCeEEEEeCCCCeEEEEEcCC---Cc--eEEEe--cCC---CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC--
Q psy13635 184 DWVARNLYWTDTGTDRIEVCRLEG---TH--RKVLV--NTD---LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-- 251 (357)
Q Consensus 184 D~~~~~lY~td~~~~~I~~~~~~g---~~--~~~~~--~~~---~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-- 251 (357)
++.++.||+++...+.|...+++. .. ...+. ... ...|.+++++|.+..||++.... +.|...+++
T Consensus 186 ~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~--~~i~v~d~~~~ 263 (343)
T 1ri6_A 186 HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA--SLITVFSVSED 263 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT--TEEEEEEECTT
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC--CEEEEEEEcCC
Confidence 988888999998888999999863 21 11121 111 34677899999877999998763 588888876
Q ss_pred CCceEEE--eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC--CCCeEEEec-CCCCceEEEEEE
Q psy13635 252 GGERVLL--VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD--GNNRRELIN-ENLPHVFGISLL 315 (357)
Q Consensus 252 g~~~~~~--~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d--G~~~~~i~~-~~~~~p~gia~~ 315 (357)
+.....+ +... ..|.++++++.+..||++....+.|...+.+ +...+.+.. .....|.++++.
T Consensus 264 ~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~ 331 (343)
T 1ri6_A 264 GSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVN 331 (343)
T ss_dssp SCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEE
T ss_pred CCceEEeeeecCC-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEE
Confidence 4333332 2223 3499999998888899999877887776443 333322221 124678888876
No 87
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=1.1e-11 Score=115.45 Aligned_cols=286 Identities=9% Similarity=0.031 Sum_probs=175.2
Q ss_pred CeEEEEEeC-------CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC---------CCCeEEEEEcCCCC
Q psy13635 41 AQMLLFATS-------KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTFDGNN 104 (357)
Q Consensus 41 ~~~l~~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~ 104 (357)
..++|+++. +.|.++|.... +....++....| ++++++++..+|+++. .++.|..++.....
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~-~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNG-KFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTC-CEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CCEEEEECCCCCccccCeEEEEECCCC-eEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 346777662 36889998653 333334444578 9999999999999974 23568888887553
Q ss_pred cceeEEEEeC-----CcCCceeEEEEcCCCeEEEEeCC-CCEEEEEEcCCCceEEEEe-cCCCCcceeeeeccCcccccC
Q psy13635 105 VGSKHNVITN-----GLITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVLYW-EDIDQPRAIASYKLPTIEVEH 177 (357)
Q Consensus 105 ~~~~~~~~~~-----~~~~p~glavd~~~~~ly~td~~-~~~I~~~~~~g~~~~~~~~-~~~~~p~~i~~~~~~~~~~~~ 177 (357)
. ..++... .-..|.++++++.++.||+++.. .+.|.+++++.... +.. -.. ..
T Consensus 93 ~--~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~--~~~~i~~----------------~~ 152 (361)
T 2oiz_A 93 F--EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY--VEDVTAA----------------AG 152 (361)
T ss_dssp E--EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE--EEEEGGG----------------TT
T ss_pred E--EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE--EEEEecC----------------CC
Confidence 1 1222211 12579999999999999999975 68999999876532 211 111 11
Q ss_pred CceEEEeCCCCeEEEEeCCCCeEEEEEcC--CCceEEEe----cCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 178 PDGVAVDWVARNLYWTDTGTDRIEVCRLE--GTHRKVLV----NTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~~I~~~~~~--g~~~~~~~----~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
..++.+.+.++..|++....+++..++.+ |+...... ...-..|..+...+....+++.... +.+..+++.
T Consensus 153 ~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~v~v~d~~ 229 (361)
T 2oiz_A 153 CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYY---GNVYSADFS 229 (361)
T ss_dssp EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTT---SEEEEEECS
T ss_pred cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCC---CeEEEEEec
Confidence 12233444444455554444555444443 22211110 0111234444434444566665543 477777776
Q ss_pred CCceEEEee----C-----CCCCceE---EEEecCCCEEEEEeC----------CCCeEEEEeCCCCCeEEEecCCCCce
Q psy13635 252 GGERVLLVK----D-----RLGWPNG---ITLDVDNEKLYWCDA----------KTDKIEMIDFDGNNRRELINENLPHV 309 (357)
Q Consensus 252 g~~~~~~~~----~-----~l~~P~g---iaid~~~~~lY~~d~----------~~~~I~~~~~dG~~~~~i~~~~~~~p 309 (357)
+.....+-. . ....|.| +++++.++++|++.. ..+.|+.+|.........+.... |
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p 307 (361)
T 2oiz_A 230 GDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--A 307 (361)
T ss_dssp SSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--C
T ss_pred CCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--e
Confidence 544332211 0 0112444 899988899999864 24589999986654433333222 9
Q ss_pred EEEEEE--CCEEEEEeCCCCeEEEEeCccC--ceeEEEecccCCceeeee
Q psy13635 310 FGISLL--GDYVYWTDWQRRSIDRVNKITG--NDREVIIERSCTGVTRRR 355 (357)
Q Consensus 310 ~gia~~--~~~ly~td~~~~~I~~~~~~~g--~~~~~i~~~l~~p~~i~~ 355 (357)
.+|++. +.+||.++. +.|..++..++ +....+......|.++..
T Consensus 308 ~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 308 LSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp CEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred eEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEe
Confidence 999997 578999985 89999999889 888887666678888764
No 88
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.56 E-value=6.5e-13 Score=120.24 Aligned_cols=241 Identities=15% Similarity=0.071 Sum_probs=160.7
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc-------CCceeEEE---EcCCCeEEE-EeC---
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-------ITPDGLAI---DWLTEKLYW-TDS--- 136 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-------~~p~glav---d~~~~~ly~-td~--- 136 (357)
-.|.++++|..++++|+++...+.|.+++.++.. ..++...++ ..|.||.+ |+. +.|++ ++.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~---~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~a 88 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS---HFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKS 88 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCC---EEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe---EEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccc
Confidence 3688899999999999999999999999998653 123333332 25789999 775 88887 452
Q ss_pred ---------CCCEEEEEEcC----CCceEEEEecCCCCc-ceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC-CeEE
Q psy13635 137 ---------ETNKLEVSSLD----GKKRKVLYWEDIDQP-RAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT-DRIE 201 (357)
Q Consensus 137 ---------~~~~I~~~~~~----g~~~~~~~~~~~~~p-~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~-~~I~ 201 (357)
+...+.+++++ |+....+-.+..... .. +.......|+++++| ..|+.|+++... +.|.
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~-----~~g~~~~~~nDvavD-~~GnaYVt~s~~~~~I~ 162 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEK-----KAGKRPFGVVQSAQD-RDGNSYVAFALGMPAIA 162 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHH-----HHSSCCEEEEEEEEC-TTSCEEEEEEESSCEEE
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccc-----cccccccCCceeEEC-CCCCEEEeCCCCCCeEE
Confidence 35789999998 544433321110000 00 000022358999999 578999999998 9999
Q ss_pred EEEcCCCceEEEecC-----CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEE-ee-----CCCCCceEE-
Q psy13635 202 VCRLEGTHRKVLVNT-----DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLL-VK-----DRLGWPNGI- 269 (357)
Q Consensus 202 ~~~~~g~~~~~~~~~-----~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~-~~-----~~l~~P~gi- 269 (357)
++++||+........ ....|+||+++|.+..|++++. . ++|.++++.......+ .. ..+..|.+|
T Consensus 163 rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~--g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgil 239 (334)
T 2p9w_A 163 RVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P--RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIV 239 (334)
T ss_dssp EECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S--SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEE
T ss_pred EEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C--CeEEEEcCCCCcceeecccccCCcccccCccccc
Confidence 999999966554321 1234779999998778888887 3 6999999884332112 21 146789995
Q ss_pred EEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec---CCCCceEEEEEE-------CCEEEEEeCC
Q psy13635 270 TLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN---ENLPHVFGISLL-------GDYVYWTDWQ 325 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~---~~~~~p~gia~~-------~~~ly~td~~ 325 (357)
++...+.-|++++...+.+...+.||-....+.. ..+. +.|++++ ++++|+.+..
T Consensus 240 p~~~~G~vllV~~~~~~~~~l~S~DgW~sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 240 TVPVGNESVLVGARAPYAISFRSWDNWKSANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEETTEEEEEEEETTEEEEEECSSTTSEEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEECC
T ss_pred ccccCCEEEEEEcCCCCEEEEECCCCcceeEEeeeecCccc-cCceeEEEEeccccCCeEEEEeee
Confidence 7764444449999877777777888844433332 1122 5565544 3778888744
No 89
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.55 E-value=6.8e-11 Score=111.69 Aligned_cols=274 Identities=14% Similarity=0.111 Sum_probs=193.6
Q ss_pred EeecCCCCeEEEEEeC--CcEEEEEcCCCCcceEe-----ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc
Q psy13635 34 ALSHHVAAQMLLFATS--KDIRIANLSRPLKPVTI-----IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG 106 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~--~~i~~~~~~~~~~~~~~-----~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~ 106 (357)
+++.++ ...++++.. +.|+.+|+.+....... ......+.++++++ ++.+|++...++.|+..++++..
T Consensus 127 ~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~-- 202 (433)
T 3bws_A 127 SVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLA-- 202 (433)
T ss_dssp CCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCC--
T ss_pred EEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCce--
Confidence 344444 445666663 35999999764333211 12344677888854 78899999888999999998764
Q ss_pred eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 107 SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 107 ~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
....+......|.++++++.++.+|++....+.|.+.++........... ...|.++++++.
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 264 (433)
T 3bws_A 203 -YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-----------------IGLPRGLLLSKD 264 (433)
T ss_dssp -EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-----------------CSEEEEEEECTT
T ss_pred -EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-----------------CCCceEEEEcCC
Confidence 23344444567999999998889999998889999999865543222111 124788999988
Q ss_pred CCeEEEEeC-------CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe
Q psy13635 187 ARNLYWTDT-------GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV 259 (357)
Q Consensus 187 ~~~lY~td~-------~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~ 259 (357)
++.||.+.. ..+.|...++.......... ....|.+++++|.+..||++.... +.|...+++.......+
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~--~~v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCC--SKIEVYDLKEKKVQKSI 341 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTT--TEEEEEETTTTEEEEEE
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCC--CEEEEEECCCCcEEEEe
Confidence 888998875 34588899987554433332 123789999999877899998774 59999999866555444
Q ss_pred eCCCCCceEEEEecCCCEEEEEeCCC--------------CeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEe
Q psy13635 260 KDRLGWPNGITLDVDNEKLYWCDAKT--------------DKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTD 323 (357)
Q Consensus 260 ~~~l~~P~giaid~~~~~lY~~d~~~--------------~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td 323 (357)
. ....|.++++++.+..||++.... +.|+..+.........+. ....|.++++. +..||++.
T Consensus 342 ~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 342 P-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE-AGNQPTGLDVSPDNRYLVISD 419 (433)
T ss_dssp E-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSCEEEEEE
T ss_pred c-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec-CCCCCceEEEcCCCCEEEEEE
Confidence 3 346789999998888899998764 489999986544433333 24578899986 46788888
Q ss_pred CCCCeEEEEeC
Q psy13635 324 WQRRSIDRVNK 334 (357)
Q Consensus 324 ~~~~~I~~~~~ 334 (357)
...+.|...+.
T Consensus 420 ~~d~~i~v~~~ 430 (433)
T 3bws_A 420 FLDHQIRVYRR 430 (433)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCeEEEEEe
Confidence 77788877765
No 90
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=1.7e-10 Score=106.54 Aligned_cols=260 Identities=9% Similarity=0.054 Sum_probs=167.7
Q ss_pred eecCCCCeEEEEEeC-----CcEEEEEcCCC-CcceEe---ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc
Q psy13635 35 LSHHVAAQMLLFATS-----KDIRIANLSRP-LKPVTI---IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV 105 (357)
Q Consensus 35 ~~~~~~~~~l~~~~~-----~~i~~~~~~~~-~~~~~~---~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~ 105 (357)
++.++...+|+.++. ..+..++++.. ...+.+ ......|..+++ .++.||+++..++.|..++++....
T Consensus 55 l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~ 132 (361)
T 3scy_A 55 LIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGA 132 (361)
T ss_dssp EEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSC
T ss_pred EEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCc
Confidence 455566677888876 36755554432 223322 224457888888 5788999998888888888764321
Q ss_pred c-eeEEE-EeCC---------cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc-------eEE-----EEecCCCCc
Q psy13635 106 G-SKHNV-ITNG---------LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK-------RKV-----LYWEDIDQP 162 (357)
Q Consensus 106 ~-~~~~~-~~~~---------~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~-------~~~-----~~~~~~~~p 162 (357)
. ..... ...+ ...|.++++++.++.||+++...++|.+++++... ... ...
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~------ 206 (361)
T 3scy_A 133 LLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK------ 206 (361)
T ss_dssp BCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE------
T ss_pred CcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee------
Confidence 1 11111 1111 12357899999888899999989999988776432 111 111
Q ss_pred ceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEe-----cCCCCCceEEEEeCCCCEEEEEe
Q psy13635 163 RAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLV-----NTDLVEPRAITLSPAHGYLFWSD 237 (357)
Q Consensus 163 ~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~-----~~~~~~P~giavd~~~g~Ly~~d 237 (357)
......|.++++++.++.||+++...+.|.+.++++.....+. ......|.+++++|.+.+||+++
T Consensus 207 ---------~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~ 277 (361)
T 3scy_A 207 ---------VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN 277 (361)
T ss_dssp ---------CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE
T ss_pred ---------cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC
Confidence 1122468899999888899999988889999888644332221 12345688999999888899998
Q ss_pred CC-CCCCeEEEEecC--CCceEEE--eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC--CCCeEEEecC-CCCce
Q psy13635 238 WN-EKRPKIERSLLN--GGERVLL--VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD--GNNRRELINE-NLPHV 309 (357)
Q Consensus 238 ~~-~~~~~I~~~~~d--g~~~~~~--~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d--G~~~~~i~~~-~~~~p 309 (357)
.. .+ .|...+++ ......+ +.. -..|.++++++++..||+++...+.|..+..| ....+.+... ....|
T Consensus 278 ~~~~~--~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p 354 (361)
T 3scy_A 278 RLKAD--GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKP 354 (361)
T ss_dssp CSSSC--EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSE
T ss_pred CCCCC--EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCC
Confidence 77 43 66666654 3332222 223 45799999998888899999888888775444 3333333211 34567
Q ss_pred EEEEE
Q psy13635 310 FGISL 314 (357)
Q Consensus 310 ~gia~ 314 (357)
..|++
T Consensus 355 ~~v~~ 359 (361)
T 3scy_A 355 VCLKF 359 (361)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 76654
No 91
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.52 E-value=1.7e-11 Score=114.39 Aligned_cols=288 Identities=11% Similarity=0.010 Sum_probs=175.8
Q ss_pred ecCCCCeEEEEEeC------CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC---------CCCeEEEEEc
Q psy13635 36 SHHVAAQMLLFATS------KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTF 100 (357)
Q Consensus 36 ~~~~~~~~l~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~---------~~~~I~~~~~ 100 (357)
...+....+|+++. +.+..+|... .+....++....|. +++++++..+|+++. .++.|..++.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t-~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEA-GRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTT-TEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCC-CeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34455667888875 3689999876 33333344445575 999999999999984 2457888988
Q ss_pred CCCCcceeEEEEeCC------cCCceeEEEEcCCCeEEEEeCC-CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcc
Q psy13635 101 DGNNVGSKHNVITNG------LITPDGLAIDWLTEKLYWTDSE-TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTI 173 (357)
Q Consensus 101 ~g~~~~~~~~~~~~~------~~~p~glavd~~~~~ly~td~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~ 173 (357)
..... ..++.... -..|.++++++.++.||+++.. .+.|.++++........+...-+ .
T Consensus 117 ~t~~v--~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~---------- 182 (386)
T 3sjl_D 117 VTLLP--TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--Y---------- 182 (386)
T ss_dssp TTCCE--EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--E----------
T ss_pred CCCeE--EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--c----------
Confidence 87641 12232221 2479999999999999999974 78999999876544322221100 0
Q ss_pred cccCCce----EEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceE--EEEeCCCCEEEEEeCCCCCCeEEE
Q psy13635 174 EVEHPDG----VAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRA--ITLSPAHGYLFWSDWNEKRPKIER 247 (357)
Q Consensus 174 ~~~~p~g----lavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~g--iavd~~~g~Ly~~d~~~~~~~I~~ 247 (357)
...|.| +++.+.+..+|++....+++.... ..... ....|.. .++++..|+++|...+ ++++.
T Consensus 183 -~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~------~~~~~-~~~~~~~~~~~~~~~dG~~~~vs~~---g~V~v 251 (386)
T 3sjl_D 183 -HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH------TEVFH-PEDEFLINHPAYSQKAGRLVWPTYT---GKIHQ 251 (386)
T ss_dssp -EEEEEETTEEEEEETTSCEEEEECCSSSCCEEEE------CCCCS-CTTSCBCSCCEEETTTTEEEEEBTT---SEEEE
T ss_pred -eeecCCCceeEEECCCCCEEEEECCCCCeEEEee------cceec-cccccccccceeEcCCCcEEEEeCC---CEEEE
Confidence 012332 233332323333222223331100 00110 1112222 3666567887776554 58999
Q ss_pred EecCCCceEEEeeCC---------CCCce---EEEEecCCCEEEEEeC---------CCCeEEEEeCCCCCeEEEecCCC
Q psy13635 248 SLLNGGERVLLVKDR---------LGWPN---GITLDVDNEKLYWCDA---------KTDKIEMIDFDGNNRRELINENL 306 (357)
Q Consensus 248 ~~~dg~~~~~~~~~~---------l~~P~---giaid~~~~~lY~~d~---------~~~~I~~~~~dG~~~~~i~~~~~ 306 (357)
++..+.....+-.-. -..|. .+++++..++||++.. ..++|+.+|.....+..-+. ..
T Consensus 252 ~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~-vg 330 (386)
T 3sjl_D 252 IDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MG 330 (386)
T ss_dssp EECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EE
T ss_pred EECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE-CC
Confidence 999877654331110 01233 3778899999999863 23689999986655433222 12
Q ss_pred CceEEEEEE--CC-EEEEEeCCCCeEEEEeCccCceeEEEecccCCcee
Q psy13635 307 PHVFGISLL--GD-YVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVT 352 (357)
Q Consensus 307 ~~p~gia~~--~~-~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~ 352 (357)
..|.+|++. +. .||.+++.++.|..+|..+++....+... ..|..
T Consensus 331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~ 378 (386)
T 3sjl_D 331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQ 378 (386)
T ss_dssp EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCC
T ss_pred CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCce
Confidence 367899986 33 69999999999999999999988888665 34443
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.50 E-value=1.2e-10 Score=114.29 Aligned_cols=288 Identities=8% Similarity=-0.022 Sum_probs=190.0
Q ss_pred CeEEEEEeC--CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcC--CCCcceeEEEEeCCc
Q psy13635 41 AQMLLFATS--KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD--GNNVGSKHNVITNGL 116 (357)
Q Consensus 41 ~~~l~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~--g~~~~~~~~~~~~~~ 116 (357)
...+++++. +.|..+|..... ....++....++++++++++..||.++.. +.|..++++ .. .....+.. -
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~-~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~---~~~~~i~~-g 221 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKK-IVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEP---TKVAEIKI-G 221 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCC-EEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSC---EEEEEEEC-C
T ss_pred CCEEEEEEcCCCeEEEEECCCce-EEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCC---cEEEEEec-C
Confidence 345677764 468999987643 33333322349999999999999999877 899999993 32 12333333 3
Q ss_pred CCceeEEEEc----CCCeEEEEeCCCCEEEEEEcCCCceEEEEec-CCCCcceeeeeccCcccccCCceEEEeCCCCeEE
Q psy13635 117 ITPDGLAIDW----LTEKLYWTDSETNKLEVSSLDGKKRKVLYWE-DIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLY 191 (357)
Q Consensus 117 ~~p~glavd~----~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY 191 (357)
..|.++++++ .++.||+++...++|..++.........+.. +.... .... ..-..+.++++.+.++.+|
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~-~~~~-----~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD-TQTY-----HPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSS-SCCE-----ESCCCEEEEEECSSSSEEE
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccC-cccc-----ccCCceEEEEECCCCCEEE
Confidence 4699999998 8999999998889999998765443333221 10000 0000 0011467888998889999
Q ss_pred EEeCCCCeEEEEEcCCCc-eE-EEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-CCCc-e
Q psy13635 192 WTDTGTDRIEVCRLEGTH-RK-VLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR-LGWP-N 267 (357)
Q Consensus 192 ~td~~~~~I~~~~~~g~~-~~-~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~-l~~P-~ 267 (357)
++....++|..++..... .. ..+. ....|.+++++|.+.++|.+.... ..|..++.........+..+ ..+| .
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~--~~v~v~D~~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNS--NKVAVIDSKDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGG--TEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred EEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCC--CeEEEEECCCCeEEEeeccCCCCCCCC
Confidence 999999999999986432 22 1222 346799999999877899998774 48999998766555444432 2223 2
Q ss_pred EEEE-ecCCCEEEEEeC-CCCeEEEEeCCC-------CCeEEEecCCCCceEEEEEE--CCEEEEEeCC------CCeEE
Q psy13635 268 GITL-DVDNEKLYWCDA-KTDKIEMIDFDG-------NNRRELINENLPHVFGISLL--GDYVYWTDWQ------RRSID 330 (357)
Q Consensus 268 giai-d~~~~~lY~~d~-~~~~I~~~~~dG-------~~~~~i~~~~~~~p~gia~~--~~~ly~td~~------~~~I~ 330 (357)
|..+ ++..+.+|++.. +.+.|..++.+. -.....+..+...+..+++. +.+||+.... .++|.
T Consensus 373 g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~ 452 (543)
T 1nir_A 373 GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 452 (543)
T ss_dssp CEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEE
T ss_pred CcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEE
Confidence 4443 556689998875 668999998865 22222333334456667776 4567765421 45899
Q ss_pred EEeCccCcee-EEE
Q psy13635 331 RVNKITGNDR-EVI 343 (357)
Q Consensus 331 ~~~~~~g~~~-~~i 343 (357)
.++..+++.. +.+
T Consensus 453 v~d~~~~~~~~~~~ 466 (543)
T 1nir_A 453 VFDLKNLDAKYQVL 466 (543)
T ss_dssp EEETTCTTSCCEEE
T ss_pred EEECCCCCCCeEEe
Confidence 9999888866 554
No 93
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.50 E-value=1.3e-11 Score=114.01 Aligned_cols=206 Identities=12% Similarity=0.090 Sum_probs=135.4
Q ss_pred eccC-CCcEEEEEEEccCCEEEEEe------------CCCCeEEEEEcCCCCcceeEEEEeCC------cCCceeEEEEc
Q psy13635 66 IIKD-LEEGAAIDYYYKKSMVCWTD------------HGTEMISCCTFDGNNVGSKHNVITNG------LITPDGLAIDW 126 (357)
Q Consensus 66 ~~~~-~~~~~~i~~d~~~~~ly~~d------------~~~~~I~~~~~~g~~~~~~~~~~~~~------~~~p~glavd~ 126 (357)
.++. ...|..|++++ ++.+|.+. ...++|++++++.... ..+++...+ -..|.||.+..
T Consensus 44 ~i~~~~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~-~~~~l~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 44 LVKGIDNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP-AVSELEIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp ECTTCCSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSC-CEEECEEECSSCCGGGCCEEEEEEEE
T ss_pred EeCCCCCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCC-ceEEEEccCCCCCcCceeeeeeEEEE
Confidence 3445 35688888877 78999986 2578999999984321 112322222 24899999965
Q ss_pred C---CCeEEEEeCC--CCEEEE--EEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC----
Q psy13635 127 L---TEKLYWTDSE--TNKLEV--SSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT---- 195 (357)
Q Consensus 127 ~---~~~ly~td~~--~~~I~~--~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~---- 195 (357)
. +.+||+++.. ..+|.. ++.++.....+ ..- ....++.|+++++|+ .|.+|+++.
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~-~~~------------~g~~~~~pND~~v~~-~G~fyvt~~~~ft 187 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL-KTI------------RHKLLPSVNDIVAVG-PEHFYATNDHYFI 187 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE-EEE------------CCTTCSSEEEEEEEE-TTEEEEEESCSCS
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE-ecc------------ccCCCCCCceEEEeC-CCCEEecCCcEeC
Confidence 2 3369999976 455555 45555443332 211 123567899999994 678888865
Q ss_pred -------------CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce---EEEe
Q psy13635 196 -------------GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER---VLLV 259 (357)
Q Consensus 196 -------------~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~---~~~~ 259 (357)
..++|+++++. ..+.+. .++..|+||+++|++..||++|+.. .+|++.++++... ...+
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~-~~l~~pNGia~spDg~~lYvadt~~--~~I~~~~~~~~g~l~~~~~~ 262 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSPN--DVRVVA-EGFDFANGINISPDGKYVYIAELLA--HKIHVYEKHANWTLTPLRVL 262 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECTT--CCEEEE-EEESSEEEEEECTTSSEEEEEEGGG--TEEEEEEECTTSCEEEEEEE
T ss_pred CcccccchhhccCCccEEEEEECC--eEEEee-cCCcccCcceECCCCCEEEEEeCCC--CeEEEEEECCCCcEecCEEE
Confidence 23578998873 344443 4688999999999988999999985 5999999864321 1222
Q ss_pred eCCCCCceEEEEecCCCEEEEEe-CCCCeEEEEeC
Q psy13635 260 KDRLGWPNGITLDVDNEKLYWCD-AKTDKIEMIDF 293 (357)
Q Consensus 260 ~~~l~~P~giaid~~~~~lY~~d-~~~~~I~~~~~ 293 (357)
. ....|.|+++|..+|+||++. .+..+|.++++
T Consensus 263 ~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 263 S-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp E-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred e-CCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 2 246799999994258999965 34334443333
No 94
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.50 E-value=9.2e-11 Score=106.39 Aligned_cols=268 Identities=9% Similarity=-0.012 Sum_probs=178.5
Q ss_pred CCcEEEEEcCCCCcceEeccCCC---cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc-----CCce
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLE---EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-----ITPD 120 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~---~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-----~~p~ 120 (357)
...|..+|+.+.. ......... .|.++++++.++.+|+++...+.|+.+++.+.. ....+..+. ..|.
T Consensus 10 ~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 10 PDKLVVIDTEKMA-VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE---TLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp TTEEEEEETTTTE-EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC---EEEEEECCBTTEEEECTT
T ss_pred CCeEEEEECCCCc-EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC---eEeeEEcCCccccccccc
Confidence 4568889986632 222222222 588999999888999999988999999987664 122222211 2689
Q ss_pred eEEEEcCCCeEEEEeC-----------CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 121 GLAIDWLTEKLYWTDS-----------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 121 glavd~~~~~ly~td~-----------~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
++++++.++.||+++. ..+.|.++++.+......+..+ ..|.++++++.++.
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-----------------~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-----------------RQITMLAWARDGSK 148 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-----------------SSCCCEEECTTSSC
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC-----------------CCcceeEECCCCCE
Confidence 9999998889999962 3589999998765443332211 35889999988888
Q ss_pred EEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCC---------------------CeEEEE
Q psy13635 190 LYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKR---------------------PKIERS 248 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~---------------------~~I~~~ 248 (357)
||++ .+.|.+.++.+.......... ..+..++++|....||++...... ..|...
T Consensus 149 l~~~---~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 224 (337)
T 1pby_B 149 LYGL---GRDLHVMDPEAGTLVEDKPIQ-SWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM 224 (337)
T ss_dssp EEEE---SSSEEEEETTTTEEEEEECST-TTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEE
T ss_pred EEEe---CCeEEEEECCCCcEeeeeecc-ccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEE
Confidence 9998 367999998765543333222 112233566665566665543210 035677
Q ss_pred ecCCCceEEE-eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCC
Q psy13635 249 LLNGGERVLL-VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQ 325 (357)
Q Consensus 249 ~~dg~~~~~~-~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~ 325 (357)
++.......+ .......|.++++++.+..||++ .+.|..++++.......+. ....|.++++. +..+|++ ..
T Consensus 225 d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~-~~ 299 (337)
T 1pby_B 225 DLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLG-GA 299 (337)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEE-SB
T ss_pred eCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCcceec-CCCceeeEEECCCCCEEEEE-cC
Confidence 7765544322 12233578899999888899998 4789999987654433332 23568889887 4568887 45
Q ss_pred CCeEEEEeCccCceeEEEecc
Q psy13635 326 RRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 326 ~~~I~~~~~~~g~~~~~i~~~ 346 (357)
.+.|..++..+++....+..+
T Consensus 300 ~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 300 LGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp SSEEEEEETTTCCEEEEEECG
T ss_pred CCcEEEEECcCCcEEEEEEcC
Confidence 689999998888887777554
No 95
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.50 E-value=1.5e-11 Score=111.36 Aligned_cols=210 Identities=13% Similarity=0.063 Sum_probs=145.0
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEE---eCCCCeE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAV---DWVARNL 190 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glav---D~~~~~l 190 (357)
.....|++++.|...+.+|+++..+++|.++++++...+.+...++..+ ......|.||.+ |+. ++|
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~---------g~~~~~~sGl~~~~~D~~-grL 79 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSN---------GDGEQQMSGLSLLTHDNS-KRL 79 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCS---------SCCSEEEEEEEESSSSSC-CEE
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCcccc---------CCCcceeeEEEEeccCCC-CcE
Confidence 3345799999998899999999999999999998654433322221100 011225789999 766 888
Q ss_pred EE-EeC------------CCCeEEEEEcC----CCceEEEec-----C-------CCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 191 YW-TDT------------GTDRIEVCRLE----GTHRKVLVN-----T-------DLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 191 Y~-td~------------~~~~I~~~~~~----g~~~~~~~~-----~-------~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
++ ++. +...+.+++++ |+....+-. + ....|+++++|+ .|++|+++....
T Consensus 80 ~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~ 158 (334)
T 2p9w_A 80 FAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGM 158 (334)
T ss_dssp EEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESS
T ss_pred EEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCC
Confidence 88 452 24679999998 544433321 1 223589999997 599999998851
Q ss_pred CCeEEEEecCCCceEEEeeCC-----CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec------CCCCceE
Q psy13635 242 RPKIERSLLNGGERVLLVKDR-----LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN------ENLPHVF 310 (357)
Q Consensus 242 ~~~I~~~~~dg~~~~~~~~~~-----l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~------~~~~~p~ 310 (357)
+.|++++.||.......... ...|+||++++.+..|++++. .+++.+++++......+-. ..+..|.
T Consensus 159 -~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~d 236 (334)
T 2p9w_A 159 -PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTE 236 (334)
T ss_dssp -CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEE
T ss_pred -CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcc
Confidence 59999999999655443221 234789999988889999998 9999999988432201211 1467899
Q ss_pred EE-EEE-CCEE-EEEeCCCCeEEEEeCccC
Q psy13635 311 GI-SLL-GDYV-YWTDWQRRSIDRVNKITG 337 (357)
Q Consensus 311 gi-a~~-~~~l-y~td~~~~~I~~~~~~~g 337 (357)
+| +.. +|.+ ++++..++.+...++ +|
T Consensus 237 gilp~~~~G~vllV~~~~~~~~~l~S~-Dg 265 (334)
T 2p9w_A 237 KIVTVPVGNESVLVGARAPYAISFRSW-DN 265 (334)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEECS-ST
T ss_pred cccccccCCEEEEEEcCCCCEEEEECC-CC
Confidence 96 554 6776 999987766555555 44
No 96
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.49 E-value=4e-11 Score=106.19 Aligned_cols=195 Identities=12% Similarity=0.006 Sum_probs=138.4
Q ss_pred CCceeEEEEcCCCeEEEEeC--CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 117 ITPDGLAIDWLTEKLYWTDS--ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~--~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
..|.|+++++. +.||++.. +.++|.++++........+.-+ ....+.|++++ +++||+++
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~---------------~~~fgeGi~~~--g~~lyv~t 82 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMD---------------DSYFGEGLTLL--NEKLYQVV 82 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECC---------------TTCCEEEEEEE--TTEEEEEE
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecC---------------CCcceEEEEEe--CCEEEEEE
Confidence 36899999964 79999975 4789999998754433222111 11245677887 67999999
Q ss_pred CCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-----CCCCceEE
Q psy13635 195 TGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-----RLGWPNGI 269 (357)
Q Consensus 195 ~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-----~l~~P~gi 269 (357)
+..+++.++|.+......-+..+ .|.|..+.+..++||+++ +. ++|..++.+......-+.. .+..|+++
T Consensus 83 ~~~~~v~viD~~t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~-gs--~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 83 WLKNIGFIYDRRTLSNIKNFTHQ--MKDGWGLATDGKILYGSD-GT--SILYEIDPHTFKLIKKHNVKYNGHRVIRLNEL 157 (266)
T ss_dssp TTCSEEEEEETTTTEEEEEEECC--SSSCCEEEECSSSEEEEC-SS--SEEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred ecCCEEEEEECCCCcEEEEEECC--CCCeEEEEECCCEEEEEC-CC--CeEEEEECCCCcEEEEEEECCCCcccccceeE
Confidence 99999999998754332223222 344555555578999998 43 5999999987655443332 24468899
Q ss_pred EEecCCCEEEEEeCCCCeEEEEeCCCCCe-EEEecCC------------CCceEEEEEE--CCEEEEEeCCCCeEEEEeC
Q psy13635 270 TLDVDNEKLYWCDAKTDKIEMIDFDGNNR-RELINEN------------LPHVFGISLL--GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~~I~~~~~dG~~~-~~i~~~~------------~~~p~gia~~--~~~ly~td~~~~~I~~~~~ 334 (357)
++. +++||++.+..+.|.++|+..... ..+-... ...|.||+++ ++++|+|....++|+.++.
T Consensus 158 e~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 158 EYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp EEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 985 689999999999999999965443 3332211 2478999998 4699999999999999986
Q ss_pred cc
Q psy13635 335 IT 336 (357)
Q Consensus 335 ~~ 336 (357)
..
T Consensus 236 ~~ 237 (266)
T 2iwa_A 236 HL 237 (266)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 97
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.48 E-value=3.5e-12 Score=117.84 Aligned_cols=202 Identities=14% Similarity=0.034 Sum_probs=135.6
Q ss_pred cCCceeEEEEcCCCeEEEEe------------CCCCEEEEEEcCCC--ceEEEEecCC-CCcceeeeeccCcccccCCce
Q psy13635 116 LITPDGLAIDWLTEKLYWTD------------SETNKLEVSSLDGK--KRKVLYWEDI-DQPRAIASYKLPTIEVEHPDG 180 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td------------~~~~~I~~~~~~g~--~~~~~~~~~~-~~p~~i~~~~~~~~~~~~p~g 180 (357)
...|+.+++++ ++.+|.+. ...++|.+++++.. ..+.+...+. . ...-..|.|
T Consensus 49 ~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~-----------~~~~f~PhG 116 (355)
T 3sre_A 49 DNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTL-----------DISSFNPHG 116 (355)
T ss_dssp CSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSC-----------CGGGCCEEE
T ss_pred CCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCC-----------CcCceeeee
Confidence 46799999996 78999986 25789999998742 2233322221 0 111237999
Q ss_pred EEEeCC---CCeEEEEeCCC--CeE--EEEEcCCCceEEE---ecCCCCCceEEEEeCCCCEEEEEeCC-----------
Q psy13635 181 VAVDWV---ARNLYWTDTGT--DRI--EVCRLEGTHRKVL---VNTDLVEPRAITLSPAHGYLFWSDWN----------- 239 (357)
Q Consensus 181 lavD~~---~~~lY~td~~~--~~I--~~~~~~g~~~~~~---~~~~~~~P~giavd~~~g~Ly~~d~~----------- 239 (357)
|.+... ..+||+++... .+| ++.+.++.....+ ....+..|+++++++. |.+|+++..
T Consensus 117 i~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~-G~fyvt~~~~ftd~~~~~~e 195 (355)
T 3sre_A 117 ISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWE 195 (355)
T ss_dssp EEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEET-TEEEEEESCSCSSHHHHHHH
T ss_pred eEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCC-CCEEecCCcEeCCcccccch
Confidence 999642 34799999873 454 4455555543322 2235788999999975 898888641
Q ss_pred ----CCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe---EEEecCCCCceEEE
Q psy13635 240 ----EKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR---RELINENLPHVFGI 312 (357)
Q Consensus 240 ----~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~---~~i~~~~~~~p~gi 312 (357)
...+++++++.. ..+. +..++..|+||++++++..||++|...++|++++.++.+. ..+. .....|.|+
T Consensus 196 ~~~~~~~g~vyr~d~~--~~~~-~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi 271 (355)
T 3sre_A 196 MHLGLAWSFVTYYSPN--DVRV-VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNI 271 (355)
T ss_dssp HHTTCCCEEEEEECTT--CCEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEE
T ss_pred hhccCCccEEEEEECC--eEEE-eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceE
Confidence 113689998873 3333 3467899999999988889999999999999999864321 1223 234689999
Q ss_pred EEE-C-CEEEEEe-CCCCeEEEEeC
Q psy13635 313 SLL-G-DYVYWTD-WQRRSIDRVNK 334 (357)
Q Consensus 313 a~~-~-~~ly~td-~~~~~I~~~~~ 334 (357)
+++ + |.+|++. +...+|.++++
T Consensus 272 ~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 272 SVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EECTTTCCEEEEEESCHHHHHSCCT
T ss_pred EEeCCCCcEEEEecCCceEEEEECC
Confidence 999 4 8999955 55334444433
No 98
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.46 E-value=1.1e-10 Score=108.49 Aligned_cols=265 Identities=13% Similarity=0.040 Sum_probs=162.3
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcC-CCCcceeEEEEe-CCcCCceeEEEEcCCCeE--EEEe-------C-
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD-GNNVGSKHNVIT-NGLITPDGLAIDWLTEKL--YWTD-------S- 136 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~~~~~~-~~~~~p~glavd~~~~~l--y~td-------~- 136 (357)
....|..+++++++..||.++.. .|..++++ ... ...+.. .....|..+++++.++.| |.++ .
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~--~v~~~~~~~~g~---~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK--KWSSFAVKSPTE---IVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT--EEEEEEEEETTE---EEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc--eEEEEEECCCCC---EEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 44578899999988889998876 67777765 221 121111 111248889999866643 4443 1
Q ss_pred ----CCCEEEEEEcC--CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC--CC
Q psy13635 137 ----ETNKLEVSSLD--GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE--GT 208 (357)
Q Consensus 137 ----~~~~I~~~~~~--g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~--g~ 208 (357)
..+.+..++++ |.....+.... ......|.++++++.++.||+++.+.++|.+.+.+ |+
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~-------------~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYE-------------YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE 179 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEE-------------CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEE-------------eCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC
Confidence 46677777664 44332221100 01124789999999888999999888899999986 43
Q ss_pred ceEE-Eec--CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC---CCce---EEE--eeCCC---C-------Cce
Q psy13635 209 HRKV-LVN--TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN---GGER---VLL--VKDRL---G-------WPN 267 (357)
Q Consensus 209 ~~~~-~~~--~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d---g~~~---~~~--~~~~l---~-------~P~ 267 (357)
.... ... .....|++++++|.+.+||++.... +.|...+.+ |... ..+ +..+. . .|.
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~--~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 257 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG--NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA 257 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC--CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccc
Confidence 3211 111 1145799999999877999998764 477666654 3221 112 11111 2 588
Q ss_pred EEE-EecCCCEEEEEeCCCC-----eEEEEeCC--CCCeEE--EecCCCCceEEEEE-----ECCEEEEEeCCCCeEEEE
Q psy13635 268 GIT-LDVDNEKLYWCDAKTD-----KIEMIDFD--GNNRRE--LINENLPHVFGISL-----LGDYVYWTDWQRRSIDRV 332 (357)
Q Consensus 268 gia-id~~~~~lY~~d~~~~-----~I~~~~~d--G~~~~~--i~~~~~~~p~gia~-----~~~~ly~td~~~~~I~~~ 332 (357)
+++ +++++..||+++.+.+ .|..++++ |..... ........|.++++ ++++||+++..++.|..+
T Consensus 258 ~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~ 337 (365)
T 1jof_A 258 DVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIY 337 (365)
T ss_dssp EEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEE
T ss_pred cEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEE
Confidence 999 9988889999987655 78777764 432211 12222334555554 467999999877888777
Q ss_pred eCccCceeEEEe-cccCCceeee
Q psy13635 333 NKITGNDREVII-ERSCTGVTRR 354 (357)
Q Consensus 333 ~~~~g~~~~~i~-~~l~~p~~i~ 354 (357)
+.. ++.++.+. -..+.|.-+.
T Consensus 338 ~~~-~~~l~~~~~~~~~~p~~~~ 359 (365)
T 1jof_A 338 RWK-DEFLHRVARVRIPEPGFGM 359 (365)
T ss_dssp EEE-TTEEEEEEEEECCSTTEEE
T ss_pred EEc-hhhCceeeEEEcCCCccee
Confidence 653 33333332 2445554433
No 99
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.46 E-value=3.5e-09 Score=104.19 Aligned_cols=303 Identities=12% Similarity=0.082 Sum_probs=203.4
Q ss_pred EEEeecCCCCeEEEEEeCC-cEEEEEcC-CCCcceEeccCCCcEEEEEEE----ccCCEEEEEeCCCCeEEEEEcCCCCc
Q psy13635 32 WYALSHHVAAQMLLFATSK-DIRIANLS-RPLKPVTIIKDLEEGAAIDYY----YKKSMVCWTDHGTEMISCCTFDGNNV 105 (357)
Q Consensus 32 ~~~~~~~~~~~~l~~~~~~-~i~~~~~~-~~~~~~~~~~~~~~~~~i~~d----~~~~~ly~~d~~~~~I~~~~~~g~~~ 105 (357)
..++..++...++++++.. .|..+|+. .+.+....+.....|.+++++ +++..+|+++...+.+..++.....
T Consensus 199 p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~- 277 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE- 277 (567)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC-
T ss_pred ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc-
Confidence 3466777778888888854 69999995 223344444455689999999 5888999999988999888866553
Q ss_pred ceeEEEEeC-C----------cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCccc
Q psy13635 106 GSKHNVITN-G----------LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIE 174 (357)
Q Consensus 106 ~~~~~~~~~-~----------~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~ 174 (357)
....+.. + ...+.++...+....++++....++|..++........+.... .
T Consensus 278 --~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~---------------~ 340 (567)
T 1qks_A 278 --PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS---------------A 340 (567)
T ss_dssp --EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE---------------C
T ss_pred --EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee---------------c
Confidence 2222221 1 1134567776666677777788899999987654321111111 1
Q ss_pred ccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC--CCCCc-eEEE-EeCCCCEEEEEeCCCCCCeEEEEec
Q psy13635 175 VEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT--DLVEP-RAIT-LSPAHGYLFWSDWNEKRPKIERSLL 250 (357)
Q Consensus 175 ~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~--~~~~P-~gia-vd~~~g~Ly~~d~~~~~~~I~~~~~ 250 (357)
-..|.++.+|+.++++|+++...++|.++|.........+.. ...+| +|.. ++|..|.+|++..... +.|..++.
T Consensus 341 ~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~-~~Vsvid~ 419 (567)
T 1qks_A 341 ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD-DSVALIGT 419 (567)
T ss_dssp CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSS-SEEEEEEC
T ss_pred cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCC-CeEEEecC
Confidence 136789999999999999999999999999886554433332 23344 4665 4777688887765332 58999998
Q ss_pred CCC-------ceEEEeeCCCCCceEEEEecCCCEEEEEeCC------CCeEEEEeCCCC-----CeE-EEec--------
Q psy13635 251 NGG-------ERVLLVKDRLGWPNGITLDVDNEKLYWCDAK------TDKIEMIDFDGN-----NRR-ELIN-------- 303 (357)
Q Consensus 251 dg~-------~~~~~~~~~l~~P~giaid~~~~~lY~~d~~------~~~I~~~~~dG~-----~~~-~i~~-------- 303 (357)
+.. .....+...-..+..|.+.+.+.+||++... .+.|..++.+.. ... .++.
T Consensus 420 ~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~ 499 (567)
T 1qks_A 420 DPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGIT 499 (567)
T ss_dssp CTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCC
T ss_pred CCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccC
Confidence 752 2222222222445668888888888887743 358999987533 221 2331
Q ss_pred CCCCceEEEEEE--CCEEEEEeCC----CCeEEEEeCccCceeEEEec-ccCCceee
Q psy13635 304 ENLPHVFGISLL--GDYVYWTDWQ----RRSIDRVNKITGNDREVIIE-RSCTGVTR 353 (357)
Q Consensus 304 ~~~~~p~gia~~--~~~ly~td~~----~~~I~~~~~~~g~~~~~i~~-~l~~p~~i 353 (357)
+....|..+.+. +.++|++.|. ++.|..+|..+++....|.. .+..|.|.
T Consensus 500 ~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~~~P~g~ 556 (567)
T 1qks_A 500 EGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDERLVTPTGK 556 (567)
T ss_dssp SSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTCCSEEEE
T ss_pred CCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCCCcccCCCee
Confidence 234678888886 5799999884 68999999889988887764 47777665
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.46 E-value=5.7e-10 Score=105.29 Aligned_cols=229 Identities=18% Similarity=0.156 Sum_probs=168.5
Q ss_pred EEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCcee
Q psy13635 44 LLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDG 121 (357)
Q Consensus 44 l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~g 121 (357)
++++. ...|+.+|+.+.............+.++++++.++.+|++...++.|+..++.... ..........|.+
T Consensus 183 ~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~~ 258 (433)
T 3bws_A 183 LWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL----EIRKTDKIGLPRG 258 (433)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE----EEEECCCCSEEEE
T ss_pred EEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc----EEEEecCCCCceE
Confidence 44444 35689999876444444444566899999999999999999888999999987653 2222233346899
Q ss_pred EEEEcCCCeEEEEeC-------CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 122 LAIDWLTEKLYWTDS-------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 122 lavd~~~~~ly~td~-------~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
+++++.++.||.+.. .++.|...++........... ...|.++++++.++.+|++.
T Consensus 259 ~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-----------------~~~~~~~~~~~~g~~l~~~~ 321 (433)
T 3bws_A 259 LLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-----------------PGNKRHIVSGNTENKIYVSD 321 (433)
T ss_dssp EEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-----------------EECEEEEEECSSTTEEEEEE
T ss_pred EEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-----------------CCCcceEEECCCCCEEEEEe
Confidence 999988888888875 456899999875543322211 12678899998888999999
Q ss_pred CCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC------------CCeEEEEecCCCceEEEeeCC
Q psy13635 195 TGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK------------RPKIERSLLNGGERVLLVKDR 262 (357)
Q Consensus 195 ~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~------------~~~I~~~~~dg~~~~~~~~~~ 262 (357)
...++|...++++........ ....|.+++++|.+..||.+..... .+.|...+.........+..
T Consensus 322 ~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~- 399 (433)
T 3bws_A 322 MCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA- 399 (433)
T ss_dssp TTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-
T ss_pred cCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-
Confidence 988999999998654443333 3467999999998778999987532 14899999876655555443
Q ss_pred CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 263 LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 263 l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
...|.++++++.+..||++....+.|...++++
T Consensus 400 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 457999999988888999988788888887764
No 101
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.44 E-value=8.6e-12 Score=116.18 Aligned_cols=277 Identities=6% Similarity=-0.084 Sum_probs=183.0
Q ss_pred eEEEEEeCC------cEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeC---------CCCeEEEEEcCCCCcc
Q psy13635 42 QMLLFATSK------DIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDH---------GTEMISCCTFDGNNVG 106 (357)
Q Consensus 42 ~~l~~~~~~------~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~~~ 106 (357)
..+|+++.. .+..+|++.. +..-.++....| +++++++...+|+++. .++.|..+++....
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~-~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~-- 107 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCG-VTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL-- 107 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTT-EEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--
T ss_pred CeEEEECCccCCccceEEEEECCCC-eEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--
Confidence 456777642 6788998773 333334444467 8999999999999984 35789999998775
Q ss_pred eeEEEEeC-C-----cCCceeEEEEcCCCeEEEEeCC-CCEEEE--EEcCCCceEEEEecCCCCcceeeeeccCcccccC
Q psy13635 107 SKHNVITN-G-----LITPDGLAIDWLTEKLYWTDSE-TNKLEV--SSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEH 177 (357)
Q Consensus 107 ~~~~~~~~-~-----~~~p~glavd~~~~~ly~td~~-~~~I~~--~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~ 177 (357)
...++... + ...|.++++++.++.||+++.. .+.+.+ +++.. ...+- -
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~---------------------v 164 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTK---------------------S 164 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEE---------------------C
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEE---------------------C
Confidence 22333222 1 2579999999999999999975 577877 65543 23221 1
Q ss_pred CceEEEeCCCCeEEEEeCCCCeEEEEEcCC----CceEEEe----cCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 178 PDGVAVDWVARNLYWTDTGTDRIEVCRLEG----THRKVLV----NTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~~I~~~~~~g----~~~~~~~----~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
|.+..+.+.+++.|++....+++..++.+. ....... -.-...|. + .+..+.+||+.. + .+..++
T Consensus 165 ~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--~--~V~viD 237 (368)
T 1mda_H 165 ASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--S--SILQGD 237 (368)
T ss_dssp SSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--S--CCEEEE
T ss_pred CCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--C--EEEEEE
Confidence 111223445667888888888888888765 2211100 00124576 4 666788888886 3 888899
Q ss_pred cCCCceEEEeeCC---------CCCceE---EEEecCCCEEEEEeC---C-----CCeEEEEeCCCCCeEEEecCCCCce
Q psy13635 250 LNGGERVLLVKDR---------LGWPNG---ITLDVDNEKLYWCDA---K-----TDKIEMIDFDGNNRRELINENLPHV 309 (357)
Q Consensus 250 ~dg~~~~~~~~~~---------l~~P~g---iaid~~~~~lY~~d~---~-----~~~I~~~~~dG~~~~~i~~~~~~~p 309 (357)
..+.....+..-. ...|.| ++++++++++|++.. + .+.+..+|........-+. ....|
T Consensus 238 ~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~-vg~~p 316 (368)
T 1mda_H 238 IPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS-NGHDS 316 (368)
T ss_dssp CCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE-EEEEE
T ss_pred CCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE-CCCCc
Confidence 8765444332111 123555 889999999999865 3 3466788886654322221 12379
Q ss_pred EEEEEE--CCEEEEEeC-CCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 310 FGISLL--GDYVYWTDW-QRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 310 ~gia~~--~~~ly~td~-~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
.||++. +.++|++.. ..+.|..+|..+++....|.-+ ..|.++.
T Consensus 317 ~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg-~~P~~i~ 363 (368)
T 1mda_H 317 DAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD-KGPESLS 363 (368)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC-SCCCEEE
T ss_pred ceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC-CCCCEEE
Confidence 999996 346999988 6899999999888888777654 5777764
No 102
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.43 E-value=2.3e-11 Score=116.57 Aligned_cols=165 Identities=16% Similarity=0.161 Sum_probs=118.4
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCceEEEEec-CCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKVLYWE-DIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~-~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
.+++..++..|.+|++++ .+.||+++...++|.+++.+ |....+.... .+.. ......+.|||+++.
T Consensus 19 ~~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~----------~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVND----------ADGQNGLLGFAFHPD 87 (454)
T ss_dssp EEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCC----------TTSSCSEEEEEECTT
T ss_pred EEEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccc----------cCCCCceeEEEECCC
Confidence 667778999999999997 67899999988899999875 4433222111 1100 012345679999986
Q ss_pred ---CCeEEEEeCC------------CCeEEEEEcCCC-----ceEEEec----CCCCCceEEEEeCCCCEEEEEeCCC--
Q psy13635 187 ---ARNLYWTDTG------------TDRIEVCRLEGT-----HRKVLVN----TDLVEPRAITLSPAHGYLFWSDWNE-- 240 (357)
Q Consensus 187 ---~~~lY~td~~------------~~~I~~~~~~g~-----~~~~~~~----~~~~~P~giavd~~~g~Ly~~d~~~-- 240 (357)
++.||++... ..+|.++..++. ..++++. .....+.+|+++|+ |+||++....
T Consensus 88 f~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~Lyv~~Gd~~~ 166 (454)
T 1cru_A 88 FKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTIGDQGR 166 (454)
T ss_dssp TTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEECCTTT
T ss_pred cCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCC-CeEEEEECCCCC
Confidence 8999999853 358999887642 2233432 23456999999985 8999995421
Q ss_pred ----------------------------CCCeEEEEecCCCc----------eEEEeeCCCCCceEEEEecCCCEEEEEe
Q psy13635 241 ----------------------------KRPKIERSLLNGGE----------RVLLVKDRLGWPNGITLDVDNEKLYWCD 282 (357)
Q Consensus 241 ----------------------------~~~~I~~~~~dg~~----------~~~~~~~~l~~P~giaid~~~~~lY~~d 282 (357)
..++|.|++.||+. ..+++..++.+|.|+++|+ ++.||++|
T Consensus 167 ~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d 245 (454)
T 1cru_A 167 NQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSE 245 (454)
T ss_dssp TSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEE
T ss_pred CCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEe
Confidence 13789999999972 3456678899999999997 79999999
Q ss_pred CCCC
Q psy13635 283 AKTD 286 (357)
Q Consensus 283 ~~~~ 286 (357)
.+..
T Consensus 246 ~g~~ 249 (454)
T 1cru_A 246 QGPN 249 (454)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 7543
No 103
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.39 E-value=1.1e-09 Score=96.18 Aligned_cols=192 Identities=13% Similarity=0.085 Sum_probs=138.8
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
....|+.|+ ++.||.+....+.|.++++...... ..+ ...-...+|++++ +++||.++...+++.+++.....
T Consensus 55 ~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~--~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 55 AFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPV--WME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp CCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCS--EEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTE
T ss_pred cccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEE--eEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCc
Confidence 345899997 6899999999999999999877532 333 3333345778886 78999999999999999986544
Q ss_pred eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCce-EEEecC----CCCCceEEE
Q psy13635 151 RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHR-KVLVNT----DLVEPRAIT 225 (357)
Q Consensus 151 ~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~-~~~~~~----~~~~P~gia 225 (357)
...-+... ..+.||+-| +++||.++ +.++|..+|+..... ..+.-. ....++.+.
T Consensus 128 ~~~ti~~~-----------------~eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe 187 (268)
T 3nok_A 128 RERTTRYS-----------------GEGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELE 187 (268)
T ss_dssp EEEEEECS-----------------SCCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EEEEEeCC-----------------CceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccE
Confidence 32222211 134567766 78999999 578999999886433 222211 234567777
Q ss_pred EeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-------------CCCCceEEEEecCCCEEEEEeCCCCeEEEEe
Q psy13635 226 LSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-------------RLGWPNGITLDVDNEKLYWCDAKTDKIEMID 292 (357)
Q Consensus 226 vd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-------------~l~~P~giaid~~~~~lY~~d~~~~~I~~~~ 292 (357)
.. +|+||...+..+ .|.++++........+.- ...-|+|||+|+.+++||+|...=.+++.+.
T Consensus 188 ~~--dG~lyanvw~s~--~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 188 CA--NGVIYANIWHSS--DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp EE--TTEEEEEETTCS--EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred Ee--CCEEEEEECCCC--eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 66 689999998854 999999976655544432 1246899999999999999998878888876
Q ss_pred C
Q psy13635 293 F 293 (357)
Q Consensus 293 ~ 293 (357)
+
T Consensus 264 ~ 264 (268)
T 3nok_A 264 L 264 (268)
T ss_dssp E
T ss_pred E
Confidence 5
No 104
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.38 E-value=2.9e-09 Score=99.48 Aligned_cols=262 Identities=9% Similarity=0.033 Sum_probs=164.6
Q ss_pred EeecCCCCeEEEEEeC-----------CcEEEEEcCCCCcceE-ecc-C-----CCcEEEEEEEccCCEEEEEeCC-CCe
Q psy13635 34 ALSHHVAAQMLLFATS-----------KDIRIANLSRPLKPVT-IIK-D-----LEEGAAIDYYYKKSMVCWTDHG-TEM 94 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~-----------~~i~~~~~~~~~~~~~-~~~-~-----~~~~~~i~~d~~~~~ly~~d~~-~~~ 94 (357)
.++.++...++|+++. +.|..+|......... ... . ...|.++++++++.+||+++.. .+.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 6677777888999872 4588999865222221 121 0 2468899999999999999875 688
Q ss_pred EEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecC-CCCcceeeeeccCcc
Q psy13635 95 ISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWED-IDQPRAIASYKLPTI 173 (357)
Q Consensus 95 I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~-~~~p~~i~~~~~~~~ 173 (357)
|..++ .+.. .... -+..|.++.+.+.++..|++...++++..++..|+......... ...+..+.
T Consensus 150 v~viD-~t~~---~~~~---~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~------- 215 (373)
T 2mad_H 150 VGLVV-QGGS---SDDQ---LLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLL------- 215 (373)
T ss_pred EEEEE-CCCC---EEeE---EcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCccee-------
Confidence 99998 6553 1111 02234456666667789999888889988888444332211000 00000000
Q ss_pred cccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec---------CCCCCceE---EEEeCCCCEEEEEeCCC-
Q psy13635 174 EVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN---------TDLVEPRA---ITLSPAHGYLFWSDWNE- 240 (357)
Q Consensus 174 ~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~---------~~~~~P~g---iavd~~~g~Ly~~d~~~- 240 (357)
...++++.++.+||... .+.+.+++..+.....+.. .....|.| +++++.+++||++....
T Consensus 216 -----~~~~~~~~~~~~~~~~~-~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 216 -----TQPAQANKSGRIVWPVY-SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred -----ecceeEecCCEEEEEcC-CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 11233444566666653 4578888886543322111 01124555 89999999999986421
Q ss_pred ------CCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCC-EEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEE
Q psy13635 241 ------KRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNE-KLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGIS 313 (357)
Q Consensus 241 ------~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~-~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia 313 (357)
....|..++........-+..+ ..|.++++++++. .+|++....+.|..+|.........+..-...|.+|.
T Consensus 290 ~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~~ 368 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLS 368 (373)
T ss_pred cccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEEE
Confidence 1248999999876554333332 3699999998777 7888887889999999876555433223456898887
Q ss_pred EEC
Q psy13635 314 LLG 316 (357)
Q Consensus 314 ~~~ 316 (357)
..+
T Consensus 369 ~~~ 371 (373)
T 2mad_H 369 VMN 371 (373)
T ss_pred Ecc
Confidence 653
No 105
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.38 E-value=1.1e-09 Score=96.09 Aligned_cols=192 Identities=14% Similarity=0.119 Sum_probs=136.2
Q ss_pred CcEEEEEEEccCCEEEEEeCCCC--eEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTE--MISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~--~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
....|+.|+ ++.||.+....+ .|.++++..... ..++....-...+|++++ +++||.++...+++.+++.+.
T Consensus 43 ~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv--~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 43 AFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKT--LQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp CEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCE--EEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTT
T ss_pred cccceEEEE--CCEEEEECCCCCCceEEEEECCCCcE--EEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECcc
Confidence 345899998 579999976544 899999987642 122322222234778887 789999999999999999865
Q ss_pred Cce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCc-eEEEec----CCCCCce
Q psy13635 149 KKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTH-RKVLVN----TDLVEPR 222 (357)
Q Consensus 149 ~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~-~~~~~~----~~~~~P~ 222 (357)
... ..+- .+ ..+.|++-| +++||.+|. .++|..+|+.... ...+.- .....++
T Consensus 117 ~~~~~ti~-~~-----------------~eG~glt~d--g~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lN 175 (262)
T 3nol_A 117 LRQVRSFN-YD-----------------GEGWGLTHN--DQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELN 175 (262)
T ss_dssp CCEEEEEE-CS-----------------SCCCCEEEC--SSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEE
T ss_pred CcEEEEEE-CC-----------------CCceEEecC--CCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccc
Confidence 443 3332 11 134566655 789999995 6899999988533 333221 1235566
Q ss_pred EEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-C-----------CCCceEEEEecCCCEEEEEeCCCCeEEE
Q psy13635 223 AITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-R-----------LGWPNGITLDVDNEKLYWCDAKTDKIEM 290 (357)
Q Consensus 223 giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-~-----------l~~P~giaid~~~~~lY~~d~~~~~I~~ 290 (357)
.+... +|+||...+..+ .|.++++........+.- + ..-|+|||+|+.+++||++-..=.+++.
T Consensus 176 ELe~~--~G~lyan~w~~~--~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~e 251 (262)
T 3nol_A 176 ELEWV--DGEIFANVWQTN--KIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFE 251 (262)
T ss_dssp EEEEE--TTEEEEEETTSS--EEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred eeEEE--CCEEEEEEccCC--eEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEE
Confidence 77776 689999999854 999999976666544432 1 2468999999999999999988888888
Q ss_pred EeC
Q psy13635 291 IDF 293 (357)
Q Consensus 291 ~~~ 293 (357)
+.+
T Consensus 252 v~~ 254 (262)
T 3nol_A 252 ITL 254 (262)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 106
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.38 E-value=3e-10 Score=105.45 Aligned_cols=251 Identities=14% Similarity=0.023 Sum_probs=155.8
Q ss_pred EeecCCCCeEEEEEeCCcEEEEEcC-CCCcceEec--cCCCcEEEEEEEccCCEEE--EEe------C------CCCeEE
Q psy13635 34 ALSHHVAAQMLLFATSKDIRIANLS-RPLKPVTII--KDLEEGAAIDYYYKKSMVC--WTD------H------GTEMIS 96 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~~~i~~~~~~-~~~~~~~~~--~~~~~~~~i~~d~~~~~ly--~~d------~------~~~~I~ 96 (357)
.++.++...+|+.++...|..++++ . .+..... +....|..++++++++.|| .++ . .++.+.
T Consensus 44 ~~a~spdg~~l~~~~~~~v~~~~~~~~-g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~ 122 (365)
T 1jof_A 44 WMTFDHERKNIYGAAMKKWSSFAVKSP-TEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGN 122 (365)
T ss_dssp EEEECTTSSEEEEEEBTEEEEEEEEET-TEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEE
T ss_pred EEEECCCCCEEEEEccceEEEEEECCC-CCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEE
Confidence 3445556667887777678888874 3 2222221 1112466678888666433 343 1 355666
Q ss_pred EEEcC--CCCcceeEEEEe-CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCceEEEEecCCCCcceeeeeccCc
Q psy13635 97 CCTFD--GNNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKVLYWEDIDQPRAIASYKLPT 172 (357)
Q Consensus 97 ~~~~~--g~~~~~~~~~~~-~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~~~~~p~~i~~~~~~~ 172 (357)
..+++ |.. ........ .....|.++++++.++.||+++.+.++|.+++++ ......+..... .
T Consensus 123 v~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~------------~ 189 (365)
T 1jof_A 123 VFSVSETGKL-EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDA------------P 189 (365)
T ss_dssp EEEECTTCCE-EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEEC------------S
T ss_pred EEccCCCCcC-cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEec------------C
Confidence 66654 432 10111111 2346799999999888899999888999999986 333222211000 0
Q ss_pred ccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC---CCce---EEEe--cCCC---C-------CceEEE-EeCCCCEE
Q psy13635 173 IEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE---GTHR---KVLV--NTDL---V-------EPRAIT-LSPAHGYL 233 (357)
Q Consensus 173 ~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~---g~~~---~~~~--~~~~---~-------~P~gia-vd~~~g~L 233 (357)
.....|.++++++.++.||+++...+.|.+.+.+ |+.. ..+. .... . .|.+++ ++|.+.+|
T Consensus 190 ~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 190 DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 0123689999999888999999887888887665 4332 1121 1111 2 489999 99987799
Q ss_pred EEEeCCCC---CCeEEEEecC--CCceEE--EeeCCCCCceEEEEec---CCCEEEEEeCCCCeEEEEeCCCCCe
Q psy13635 234 FWSDWNEK---RPKIERSLLN--GGERVL--LVKDRLGWPNGITLDV---DNEKLYWCDAKTDKIEMIDFDGNNR 298 (357)
Q Consensus 234 y~~d~~~~---~~~I~~~~~d--g~~~~~--~~~~~l~~P~giaid~---~~~~lY~~d~~~~~I~~~~~dG~~~ 298 (357)
|+++.+.+ .+.|...+++ |..... ........|.++++++ ++++||+++...+.|..++.++...
T Consensus 270 ~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 270 FASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp EEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred EEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 99987532 0166666664 332221 2222345689999998 6889999998888888888776633
No 107
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.38 E-value=2.6e-09 Score=92.82 Aligned_cols=196 Identities=13% Similarity=0.110 Sum_probs=137.8
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCC--CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
.-....|+.|+. +.||.+.... ..|.++++..... ...+....-...+|++++ +++||..+..++++.+++.
T Consensus 19 ~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv--~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 19 TTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRI--LQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp TTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCE--EEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEET
T ss_pred CccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCE--EEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEEC
Confidence 344678999984 8999997654 5899999987741 122322333345777877 7999999999999999998
Q ss_pred CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCce-EEEecC----CCCCc
Q psy13635 147 DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHR-KVLVNT----DLVEP 221 (357)
Q Consensus 147 ~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~-~~~~~~----~~~~P 221 (357)
+......-+..+ ..+.||+- .+++||++|. .++|..+|+..... ..+.-. .+..+
T Consensus 93 ~tl~~~~ti~~~-----------------~~Gwglt~--dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~l 152 (243)
T 3mbr_X 93 ATLTPRARFRYP-----------------GEGWALTS--DDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNL 152 (243)
T ss_dssp TTTEEEEEEECS-----------------SCCCEEEE--CSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred CcCcEEEEEeCC-----------------CCceEEee--CCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccc
Confidence 654433222211 13455554 4789999995 78999999876433 222111 23456
Q ss_pred eEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee-C------------CCCCceEEEEecCCCEEEEEeCCCCeE
Q psy13635 222 RAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-D------------RLGWPNGITLDVDNEKLYWCDAKTDKI 288 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-~------------~l~~P~giaid~~~~~lY~~d~~~~~I 288 (357)
+.+... +|+||...+..+ .|.++++........+. . ...-|+|||.|+.+++||+|...=.++
T Consensus 153 NeLe~~--~G~lyanvw~s~--~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~ 228 (243)
T 3mbr_X 153 NELEWV--NGELLANVWLTS--RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPML 228 (243)
T ss_dssp EEEEEE--TTEEEEEETTTT--EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEE
T ss_pred eeeEEe--CCEEEEEECCCC--eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcE
Confidence 666655 699999998854 99999997666554443 1 123689999999999999999888888
Q ss_pred EEEeCC
Q psy13635 289 EMIDFD 294 (357)
Q Consensus 289 ~~~~~d 294 (357)
+.+.+.
T Consensus 229 ~~v~~~ 234 (243)
T 3mbr_X 229 YEIRLT 234 (243)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 888764
No 108
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.34 E-value=1.4e-09 Score=97.34 Aligned_cols=234 Identities=11% Similarity=0.048 Sum_probs=163.6
Q ss_pred CCEEEEEeCCCCeEEEEEc-CCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCC
Q psy13635 82 KSMVCWTDHGTEMISCCTF-DGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDID 160 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~-~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~ 160 (357)
.+++++++..++.|+.++. +|.. ..+.-......+.++++++ ++++|++ ..+.|..++.+|+..-.+-...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~---~w~~~~~~~~~~~~~~~~p-dG~ilvs--~~~~V~~~d~~G~~~W~~~~~~-- 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEI---VWEYPLEKGWECNSVAATK-AGEILFS--YSKGAKMITRDGRELWNIAAPA-- 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEE---EEEEECCTTCCCCEEEECT-TSCEEEE--CBSEEEEECTTSCEEEEEECCT--
T ss_pred CCcEEEeeCCCCEEEEEECCCCeE---EEEeCCCccCCCcCeEECC-CCCEEEe--CCCCEEEECCCCCEEEEEcCCC--
Confidence 4677888888888888887 4432 1223222224688999996 5677774 3678999999887654442110
Q ss_pred CcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-CCeEEEEEcCCCceEEEecC-----CCCCceEEEEeCCCCEEE
Q psy13635 161 QPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-TDRIEVCRLEGTHRKVLVNT-----DLVEPRAITLSPAHGYLF 234 (357)
Q Consensus 161 ~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-~~~I~~~~~~g~~~~~~~~~-----~~~~P~giavd~~~g~Ly 234 (357)
. ..+.+.++. .+|++++++.. .++|..++++|+....+... ....|.++++++ +|.++
T Consensus 76 ---~-----------~~~~~~~~~-~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~l 139 (276)
T 3no2_A 76 ---G-----------CEMQTARIL-PDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-KGNYL 139 (276)
T ss_dssp ---T-----------CEEEEEEEC-TTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEE
T ss_pred ---C-----------ccccccEEC-CCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECC-CCCEE
Confidence 0 023345555 46678888877 77999999999876554321 123577888887 47788
Q ss_pred EEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC-CCCeEEEecC-----CCCc
Q psy13635 235 WSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD-GNNRRELINE-----NLPH 308 (357)
Q Consensus 235 ~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~~~-----~~~~ 308 (357)
+++... ++|...+.+|......-.. ..|.++++. .++++++++...++|..++++ |+..-.+... .+..
T Consensus 140 v~~~~~--~~v~~~d~~G~~~w~~~~~--~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~ 214 (276)
T 3no2_A 140 VPLFAT--SEVREIAPNGQLLNSVKLS--GTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFF 214 (276)
T ss_dssp EEETTT--TEEEEECTTSCEEEEEECS--SCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSE
T ss_pred EEecCC--CEEEEECCCCCEEEEEECC--CCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccc
Confidence 888874 6999999997766555332 578888887 678899999888999999998 8766555432 3556
Q ss_pred eEEEEEE-CCEEEEEeCC----------CCeEEEEeCccCceeEEEec
Q psy13635 309 VFGISLL-GDYVYWTDWQ----------RRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 309 p~gia~~-~~~ly~td~~----------~~~I~~~~~~~g~~~~~i~~ 345 (357)
|.++++. +|.+|++++. ..+++.+++ +|+.+-...+
T Consensus 215 ~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~-~g~~~W~~~~ 261 (276)
T 3no2_A 215 VAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS-EGKVVWQLND 261 (276)
T ss_dssp EEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT-TSBEEEEECC
T ss_pred cccceEcCCCCEEEEeccCccccccccCCceEEEECC-CCCEEEEecC
Confidence 8999987 7999999962 346899988 7887655533
No 109
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.33 E-value=1.3e-08 Score=100.08 Aligned_cols=283 Identities=9% Similarity=0.001 Sum_probs=182.9
Q ss_pred CeEEEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcC-CCCcceeEEEEeCCcC
Q psy13635 41 AQMLLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD-GNNVGSKHNVITNGLI 117 (357)
Q Consensus 41 ~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~~~~~~~~~~ 117 (357)
...+++++ .+.|..+|.++. +....++....|+++.+++++..+|+++. ++.|..+++. .+. .....+..+ .
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~-~v~~~i~~g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~--~~v~~i~~G-~ 240 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTY-EIKTVLDTGYAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEP--TTVAEIKIG-S 240 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTC-CEEEEEECSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSC--CEEEEEECC-S
T ss_pred CceEEEEeCCCCeEEEEECCCC-eEEEEEeCCCCccceEECCCCCEEEEEcC-CCeEEEEECCCCCC--cEeEEEecC-C
Confidence 34566666 357999999763 33333445557899999999999999874 5789999995 222 123333333 3
Q ss_pred CceeEEEE----cCCCeEEEEeCCCCEEEEEEcCCCceEEEEecC-CC-CcceeeeeccCcccccCCceEEEeCCCCeEE
Q psy13635 118 TPDGLAID----WLTEKLYWTDSETNKLEVSSLDGKKRKVLYWED-ID-QPRAIASYKLPTIEVEHPDGVAVDWVARNLY 191 (357)
Q Consensus 118 ~p~glavd----~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~-~~-~p~~i~~~~~~~~~~~~p~glavD~~~~~lY 191 (357)
.|.+++++ +.++.+|+++...++|.+++.........+... .. ..... ..-..+.++...+.+...+
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~-------~p~~rva~i~~s~~~~~~v 313 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY-------HPEPRVAAILASHYRPEFI 313 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCE-------ESCCCEEEEEECSSSSEEE
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccc-------cCCCceEEEEEcCCCCEEE
Confidence 69999999 588899999999999999986554333223211 00 00000 0001234666666667778
Q ss_pred EEeCCCCeEEEEEcCCCce-EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-C-CCCc-e
Q psy13635 192 WTDTGTDRIEVCRLEGTHR-KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-R-LGWP-N 267 (357)
Q Consensus 192 ~td~~~~~I~~~~~~g~~~-~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-~-l~~P-~ 267 (357)
++....++|..++...... .+..-..-..|.++.++|.+.++|+++... .+|..++.........+.. + ..+| .
T Consensus 314 v~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~s--n~V~ViD~~t~kl~~~i~vgg~~Phpg~ 391 (567)
T 1qks_A 314 VNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANAR--NKLVVIDTKEGKLVAIEDTGGQTPHPGR 391 (567)
T ss_dssp EEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGG--TEEEEEETTTTEEEEEEECSSSSBCCTT
T ss_pred EEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCC--CeEEEEECCCCcEEEEEeccCcCCCCcc
Confidence 8888888999998765421 111112335799999999888899999875 4999999987655555544 2 2334 3
Q ss_pred EEE-EecCCCEEEEEe-CCCCeEEEEeCCCC-------CeEEEecCCCCceEEEEEE--CCEEEEEeCC------CCeEE
Q psy13635 268 GIT-LDVDNEKLYWCD-AKTDKIEMIDFDGN-------NRRELINENLPHVFGISLL--GDYVYWTDWQ------RRSID 330 (357)
Q Consensus 268 gia-id~~~~~lY~~d-~~~~~I~~~~~dG~-------~~~~i~~~~~~~p~gia~~--~~~ly~td~~------~~~I~ 330 (357)
|.. +++..+.+|++. .+.+.|..++.+.. .....+..+...+..|... +.++|++... +++|.
T Consensus 392 g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~ 471 (567)
T 1qks_A 392 GANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVA 471 (567)
T ss_dssp CEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEE
T ss_pred ceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEE
Confidence 665 465568888765 46689999998752 2222222233455667665 4688887743 35899
Q ss_pred EEeCccC
Q psy13635 331 RVNKITG 337 (357)
Q Consensus 331 ~~~~~~g 337 (357)
.++..+.
T Consensus 472 v~d~~~~ 478 (567)
T 1qks_A 472 VFDIKAM 478 (567)
T ss_dssp EEEGGGC
T ss_pred EEECCcc
Confidence 9997655
No 110
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.30 E-value=5.8e-09 Score=94.98 Aligned_cols=246 Identities=11% Similarity=0.007 Sum_probs=159.6
Q ss_pred EEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe-CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEE
Q psy13635 75 AIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKV 153 (357)
Q Consensus 75 ~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~ 153 (357)
|+++. .++.+|++...++.|+.+++.+.. ....+. .....|.++++++.++.+|+++...+.|.+++++......
T Consensus 4 g~~~~-~~~~~~v~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALK-AGHEYMIVTNYPNNLHVVDVASDT---VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCC-TTCEEEEEEETTTEEEEEETTTTE---EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccccc-CCCEEEEEeCCCCeEEEEECCCCc---EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 34444 367889998888999999987653 122222 2223699999998888899999889999999987654433
Q ss_pred EEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-----------CCeEEEEEcCCCc-e--EEEecCCCC
Q psy13635 154 LYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-----------TDRIEVCRLEGTH-R--KVLVNTDLV 219 (357)
Q Consensus 154 ~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-----------~~~I~~~~~~g~~-~--~~~~~~~~~ 219 (357)
.+.... .| ......|.++++++.++.||++... .+.|.+.++.... . ..... .-.
T Consensus 80 ~~~~~~-~~---------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~ 148 (349)
T 1jmx_B 80 HANLSS-VP---------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPR 148 (349)
T ss_dssp EEESCC-ST---------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCS
T ss_pred EEEccc-cc---------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCC
Confidence 222110 00 0002358999999988899998854 4689999987522 1 11222 223
Q ss_pred CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-------------------------------------
Q psy13635 220 EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR------------------------------------- 262 (357)
Q Consensus 220 ~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~------------------------------------- 262 (357)
.+.+++++|. |++|++. ..|...+.........+...
T Consensus 149 ~~~~~~~s~d-g~l~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 222 (349)
T 1jmx_B 149 QVYLMRAADD-GSLYVAG-----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDD 222 (349)
T ss_dssp SCCCEEECTT-SCEEEES-----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---
T ss_pred cccceeECCC-CcEEEcc-----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCC
Confidence 6888999986 4587752 24777776543332222111
Q ss_pred -------------------------------CCCceEEEEec-CCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceE
Q psy13635 263 -------------------------------LGWPNGITLDV-DNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVF 310 (357)
Q Consensus 263 -------------------------------l~~P~giaid~-~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~ 310 (357)
-..|.++++++ .++.||++ .+.|..+++........+. ....|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~~-~~~~~~ 298 (349)
T 1jmx_B 223 KQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAAN-LDHTYY 298 (349)
T ss_dssp ----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEEE-CSSCCC
T ss_pred cCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEEc-CCCCcc
Confidence 01355666767 77788888 6789999987654433332 234578
Q ss_pred EEEEE--CCEEEEEeCCCCeEEEEeCccCceeEEEecc
Q psy13635 311 GISLL--GDYVYWTDWQRRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 311 gia~~--~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~ 346 (357)
++++. ++.||++ ...+.|..++..+++....+..+
T Consensus 299 ~~~~s~dg~~l~~~-~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 299 CVAFDKKGDKLYLG-GTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEECSSSSCEEEE-SBSSEEEEEETTTTEEEEEEECS
T ss_pred ceEECCCCCEEEEe-cCCCeEEEEeccccceeeeeecC
Confidence 88886 4578886 45589999998788877776544
No 111
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.26 E-value=1.1e-08 Score=96.40 Aligned_cols=241 Identities=11% Similarity=-0.002 Sum_probs=158.7
Q ss_pred ccCCEEEEEeCCCCeEEEEEcCCCCc-ceeEEEE-------eCCcCCceeEEEEcCCCeEEEEeCCC------CEEEEEE
Q psy13635 80 YKKSMVCWTDHGTEMISCCTFDGNNV-GSKHNVI-------TNGLITPDGLAIDWLTEKLYWTDSET------NKLEVSS 145 (357)
Q Consensus 80 ~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~-------~~~~~~p~glavd~~~~~ly~td~~~------~~I~~~~ 145 (357)
....+||++...+++|+.++...... .....++ ..+...|.++.+-+. + ||++..++ +.|..++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd-G-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD-A-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS-C-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC-e-EEEEcCCCcCCCCCCeEEEEE
Confidence 56789999999999999999854321 1122333 235668999999864 4 99988765 7898888
Q ss_pred cCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC------------------CCeEEEEEcCC
Q psy13635 146 LDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG------------------TDRIEVCRLEG 207 (357)
Q Consensus 146 ~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~------------------~~~I~~~~~~g 207 (357)
............+ ......+.++-+.+..+.+|.++++ .++|.+.+++.
T Consensus 171 ~~T~~v~~~~~~~-------------~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 171 HYSFEPLGKWEID-------------RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp TTTCCEEEECCSB-------------CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred CCCCeEEEEEccC-------------CCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 7754433222111 0011124456667778889988854 68999999986
Q ss_pred CceEEEecCC--CCCceEEEE--eCCCCEEEEEeC-----CCCCCeEEEEecCCCceE--EEe--eC-----C-------
Q psy13635 208 THRKVLVNTD--LVEPRAITL--SPAHGYLFWSDW-----NEKRPKIERSLLNGGERV--LLV--KD-----R------- 262 (357)
Q Consensus 208 ~~~~~~~~~~--~~~P~giav--d~~~g~Ly~~d~-----~~~~~~I~~~~~dg~~~~--~~~--~~-----~------- 262 (357)
......+..+ ...|..|.+ +|....+|++.. -. +.|.....++..-. .++ .. .
T Consensus 238 ~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls--s~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~ 315 (462)
T 2ece_A 238 RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS--SSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKP 315 (462)
T ss_dssp TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC--EEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGG
T ss_pred CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC--ceEEEEEecCCceeEEEEEeCCCccccccccccccc
Confidence 5333222221 246888877 998889999987 53 47877666543211 111 11 0
Q ss_pred ----CCCceEEEEecCCCEEEEEeCCCCeEEEEeCC-CCCeEEE---ecCCC-------------CceEEEEEE--CCEE
Q psy13635 263 ----LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD-GNNRREL---INENL-------------PHVFGISLL--GDYV 319 (357)
Q Consensus 263 ----l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d-G~~~~~i---~~~~~-------------~~p~gia~~--~~~l 319 (357)
-..|.+|.+++++..||+++.+.+.|..++.+ ....+.+ -.++. .+|.++++. +.+|
T Consensus 316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~L 395 (462)
T 2ece_A 316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRV 395 (462)
T ss_dssp GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEE
Confidence 24689999999999999999999999999974 3222222 11111 269999986 6899
Q ss_pred EEEe--------C-----CCCeEEEE--eCccC
Q psy13635 320 YWTD--------W-----QRRSIDRV--NKITG 337 (357)
Q Consensus 320 y~td--------~-----~~~~I~~~--~~~~g 337 (357)
|+++ . .+..++++ +..+|
T Consensus 396 yVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G 428 (462)
T 2ece_A 396 YVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG 428 (462)
T ss_dssp EEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC
T ss_pred EEEcCCcccccccccCCCCceEEEEEEecCCCC
Confidence 9999 3 45667755 66556
No 112
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.26 E-value=1.3e-09 Score=104.31 Aligned_cols=257 Identities=12% Similarity=0.022 Sum_probs=159.2
Q ss_pred cceEeccCCCcEEEEEEEccCC-EEEEEeCCCCeEEEEEcCCCCcceeEE----EEeCC-----cCCceeEEEEcC---C
Q psy13635 62 KPVTIIKDLEEGAAIDYYYKKS-MVCWTDHGTEMISCCTFDGNNVGSKHN----VITNG-----LITPDGLAIDWL---T 128 (357)
Q Consensus 62 ~~~~~~~~~~~~~~i~~d~~~~-~ly~~d~~~~~I~~~~~~g~~~~~~~~----~~~~~-----~~~p~glavd~~---~ 128 (357)
..+.+.+.+..|++|++.++.. +||+++.. +.|+.++.+|........ +...+ ...+.|||+++. +
T Consensus 5 ~v~~va~gL~~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 5 CIQEVVSGLRQPVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEEEESSEEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred EEEEeccCCCCceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 4456667889999999998763 79999975 789999877652111111 12222 346789999974 5
Q ss_pred CeEEEEeCC--C----------CEEEEEEcCCC--------ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 129 EKLYWTDSE--T----------NKLEVSSLDGK--------KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 129 ~~ly~td~~--~----------~~I~~~~~~g~--------~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
+.||++-+. . .+|.|+.++.. ..++++... +....+....|++++ .|
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~------------~~~~~H~g~~l~fgp-DG 150 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVA------------ELHRKHLGGQLLFGP-DG 150 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEE------------ESSSSSCEEEEEECT-TS
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcC------------CCCCcccCCcEeECC-CC
Confidence 789987532 1 37888887531 123443211 023345677899996 67
Q ss_pred eEEEEeCC-----------------CCeEEEEEcCCCc-------------------eEEEecCCCCCceEEEEeCCCC-
Q psy13635 189 NLYWTDTG-----------------TDRIEVCRLEGTH-------------------RKVLVNTDLVEPRAITLSPAHG- 231 (357)
Q Consensus 189 ~lY~td~~-----------------~~~I~~~~~~g~~-------------------~~~~~~~~~~~P~giavd~~~g- 231 (357)
+||++-.. .++|.|+++||.. ...+...++.+|.|+++||.++
T Consensus 151 ~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~ 230 (463)
T 2wg3_C 151 FLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTD 230 (463)
T ss_dssp CEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSS
T ss_pred cEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCC
Confidence 99998432 2479999999941 1234445789999999999754
Q ss_pred -----EEEEEeCCCC---CCeEEEEecCC---C-ceEEEeeC-CCCCceEEEEec------CCCEEEEEeCCCCeEEEEe
Q psy13635 232 -----YLFWSDWNEK---RPKIERSLLNG---G-ERVLLVKD-RLGWPNGITLDV------DNEKLYWCDAKTDKIEMID 292 (357)
Q Consensus 232 -----~Ly~~d~~~~---~~~I~~~~~dg---~-~~~~~~~~-~l~~P~giaid~------~~~~lY~~d~~~~~I~~~~ 292 (357)
.+|.+|.... ...|..+...+ . .....+.. .-..|.|+++-. ..+.+++++.. ++|.++.
T Consensus 231 ~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~ 309 (463)
T 2wg3_C 231 ININLTILCSDSNGKNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQ 309 (463)
T ss_dssp TTCSEEEEEECC------CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEE
T ss_pred cccceEEEecccCCCCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEE
Confidence 7888886321 12444442211 0 11111111 114688999832 23458899986 7899998
Q ss_pred CCCCC---eEEEec---------CCCCceEEEEEE-CCEEEEEeC-------CCCeEEEEe
Q psy13635 293 FDGNN---RRELIN---------ENLPHVFGISLL-GDYVYWTDW-------QRRSIDRVN 333 (357)
Q Consensus 293 ~dG~~---~~~i~~---------~~~~~p~gia~~-~~~ly~td~-------~~~~I~~~~ 333 (357)
++... ....+. .....|.+++.+ +|.||++++ ..++|+|+.
T Consensus 310 ~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 310 QSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp C-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred eCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEec
Confidence 76432 222221 124578999998 589999997 568999987
No 113
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.24 E-value=1.5e-08 Score=91.72 Aligned_cols=245 Identities=9% Similarity=-0.025 Sum_probs=154.6
Q ss_pred EEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc-C-CceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCc
Q psy13635 85 VCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-I-TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQP 162 (357)
Q Consensus 85 ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-~-~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p 162 (357)
++++...++.|..+++.... ....+..+- . .|.++++++.++.+|+++...+.|.++++........+..+..
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-- 77 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMA---VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-- 77 (337)
T ss_dssp EEEEEETTTEEEEEETTTTE---EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT--
T ss_pred EEEEcCCCCeEEEEECCCCc---EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc--
Confidence 44555556667777765542 122222222 1 5899999998889999999889999999865443322221100
Q ss_pred ceeeeeccCcccccCCceEEEeCCCCeEEEEeC-----------CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCC
Q psy13635 163 RAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT-----------GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHG 231 (357)
Q Consensus 163 ~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~-----------~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g 231 (357)
......|.++++++.++.||+++. ..+.|.+.++++......... ...|.+++++|.+.
T Consensus 78 ---------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~ 147 (337)
T 1pby_B 78 ---------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGS 147 (337)
T ss_dssp ---------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSS
T ss_pred ---------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCC
Confidence 000126889999988889999962 247899999886544333332 35799999999877
Q ss_pred EEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCC-----------------------eE
Q psy13635 232 YLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTD-----------------------KI 288 (357)
Q Consensus 232 ~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~-----------------------~I 288 (357)
+||+++ +.|...++++......+... ..+..+++++.+..||++....+ .|
T Consensus 148 ~l~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 148 KLYGLG-----RDLHVMDPEAGTLVEDKPIQ-SWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp CEEEES-----SSEEEEETTTTEEEEEECST-TTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred EEEEeC-----CeEEEEECCCCcEeeeeecc-ccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 899992 47899998766554443322 11222355555666666654444 35
Q ss_pred EEEeCCCCCeEEE-ecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 289 EMIDFDGNNRREL-INENLPHVFGISLL--GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 289 ~~~~~dG~~~~~i-~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
..++........+ .......|.++++. +..+|++ .+.|+.++..+++....+..+ ..|.++.
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~-~~~~~~~ 286 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPLP-HSYYSVN 286 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEECS-SCCCEEE
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCcceecCC-CceeeEE
Confidence 7777765444322 11233478888886 4578888 478999998777776665433 3455554
No 114
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.23 E-value=7.8e-09 Score=96.04 Aligned_cols=261 Identities=10% Similarity=0.037 Sum_probs=154.6
Q ss_pred EeecCCCCeEEEEEeC-----------CcEEEEEcCCCCcceEe-cc-----CCCcEEEEEEEccCCEEEEEeCC-CCeE
Q psy13635 34 ALSHHVAAQMLLFATS-----------KDIRIANLSRPLKPVTI-IK-----DLEEGAAIDYYYKKSMVCWTDHG-TEMI 95 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~-----------~~i~~~~~~~~~~~~~~-~~-----~~~~~~~i~~d~~~~~ly~~d~~-~~~I 95 (357)
.++.++...++|.++. +.|..+|+........+ .. ....|.++++++++..||+++.. .+.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 6777878888998872 35899998653222222 11 13468899999999999999875 6889
Q ss_pred EEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC--CCceEEEEecCCCCcceeeeeccCcc
Q psy13635 96 SCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD--GKKRKVLYWEDIDQPRAIASYKLPTI 173 (357)
Q Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~--g~~~~~~~~~~~~~p~~i~~~~~~~~ 173 (357)
..++++... ....+ -......++.+.+.++..|++....+++..+..+ |+..........-.+
T Consensus 134 ~v~d~~~~~---~~~~~-i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~----------- 198 (361)
T 2oiz_A 134 GIVDVAKGD---YVEDV-TAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSV----------- 198 (361)
T ss_dssp EEEETTTTE---EEEEE-GGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCT-----------
T ss_pred EEEECCCCc---EEEEE-ecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcC-----------
Confidence 999988653 11120 1122233345555555566665556666655553 322211110000000
Q ss_pred cccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec---------CCCCCceE---EEEeCCCCEEEEEeC-CC
Q psy13635 174 EVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN---------TDLVEPRA---ITLSPAHGYLFWSDW-NE 240 (357)
Q Consensus 174 ~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~---------~~~~~P~g---iavd~~~g~Ly~~d~-~~ 240 (357)
-..|..+...+.++.+++... .+++.+++..+.....+.. .....|.| +++++..+++|++.. ..
T Consensus 199 -~~~~~~~~~~~~g~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 199 -KDDPIFIAPALDKDKAHFVSY-YGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp -TTSCBCSCCEECSSEEEEEBT-TSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred -CCCceEEEecccCCEEEEEeC-CCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 001211111222345555443 3567777766443322211 01123444 999999899999865 10
Q ss_pred -------CCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC--CeEEEecCCCCceEE
Q psy13635 241 -------KRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN--NRRELINENLPHVFG 311 (357)
Q Consensus 241 -------~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~--~~~~i~~~~~~~p~g 311 (357)
....|..+++........+..+- |.+|++++++.+||++.. +.|..+|.... .....+.....+|.+
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~ 352 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQ 352 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEE
T ss_pred CcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEE
Confidence 02489999988765555454443 999999999999999885 89999998665 333333345679999
Q ss_pred EEEE
Q psy13635 312 ISLL 315 (357)
Q Consensus 312 ia~~ 315 (357)
+++.
T Consensus 353 ~~~~ 356 (361)
T 2oiz_A 353 VQFH 356 (361)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9886
No 115
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.22 E-value=7.1e-08 Score=83.82 Aligned_cols=193 Identities=17% Similarity=0.044 Sum_probs=133.1
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCC--CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLY 191 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY 191 (357)
+.-....||++| ++.||.+... ..+|.++++.......-..-+ .-....|++++ +++||
T Consensus 18 d~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~---------------~~~fgeGi~~~--~~~ly 78 (243)
T 3mbr_X 18 DTTAFTEGLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAEVP---------------PPYFGAGIVAW--RDRLI 78 (243)
T ss_dssp CTTCCEEEEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEECC---------------TTCCEEEEEEE--TTEEE
T ss_pred CCccccccEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEeCC---------------CCcceeEEEEe--CCEEE
Confidence 344567899999 4899999765 469999999755433222111 00123566666 78999
Q ss_pred EEeCCCCeEEEEEcCCCc-eEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-----CCCC
Q psy13635 192 WTDTGTDRIEVCRLEGTH-RKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-----RLGW 265 (357)
Q Consensus 192 ~td~~~~~I~~~~~~g~~-~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-----~l~~ 265 (357)
..++..+++.++|++... ...+-. . ..+.|++-| +++||.+|. . .+|...+........-+.. .+..
T Consensus 79 ~ltw~~~~v~v~D~~tl~~~~ti~~-~-~~Gwglt~d--g~~L~vSdg-s--~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 79 QLTWRNHEGFVYDLATLTPRARFRY-P-GEGWALTSD--DSHLYMSDG-T--AVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp EEESSSSEEEEEETTTTEEEEEEEC-S-SCCCEEEEC--SSCEEEECS-S--SEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred EEEeeCCEEEEEECCcCcEEEEEeC-C-CCceEEeeC--CCEEEEECC-C--CeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 999999999999987544 334332 2 356777655 689999994 3 5999999886544333322 2345
Q ss_pred ceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec-C------------CCCceEEEEEE--CCEEEEEeCCCCeEE
Q psy13635 266 PNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN-E------------NLPHVFGISLL--GDYVYWTDWQRRSID 330 (357)
Q Consensus 266 P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~-~------------~~~~p~gia~~--~~~ly~td~~~~~I~ 330 (357)
++.+.. .+++||...+.++.|.++|+........+. . ...-|.|||++ +++||+|.-.=..++
T Consensus 152 lNeLe~--~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~ 229 (243)
T 3mbr_X 152 LNELEW--VNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLY 229 (243)
T ss_dssp EEEEEE--ETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred ceeeEE--eCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEE
Confidence 677775 489999999999999999996544333322 1 22368999999 489999985556888
Q ss_pred EEeC
Q psy13635 331 RVNK 334 (357)
Q Consensus 331 ~~~~ 334 (357)
.+..
T Consensus 230 ~v~~ 233 (243)
T 3mbr_X 230 EIRL 233 (243)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7764
No 116
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.22 E-value=1.7e-08 Score=90.26 Aligned_cols=241 Identities=11% Similarity=-0.010 Sum_probs=159.5
Q ss_pred CCcEEEEEc-CCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC
Q psy13635 49 SKDIRIANL-SRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 127 (357)
Q Consensus 49 ~~~i~~~~~-~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~ 127 (357)
.+.|..+|. +|....+........+..+++.++ ++|+++ ..+.|+.++.+|.. ..+.-...-..+.++++.+
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd-G~ilvs--~~~~V~~~d~~G~~---~W~~~~~~~~~~~~~~~~~- 86 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKA-GEILFS--YSKGAKMITRDGRE---LWNIAAPAGCEMQTARILP- 86 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCEEEECTT-SCEEEE--CBSEEEEECTTSCE---EEEEECCTTCEEEEEEECT-
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcCeEECCC-CCEEEe--CCCCEEEECCCCCE---EEEEcCCCCccccccEECC-
Confidence 445778887 442222222222236788888874 556664 35679999987653 2332222112345667774
Q ss_pred CCeEEEEeCC-CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC
Q psy13635 128 TEKLYWTDSE-TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE 206 (357)
Q Consensus 128 ~~~ly~td~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~ 206 (357)
++++++++.. +++|..++.+|+....+...... ......|.++++++ +|.+++++...++|..++++
T Consensus 87 dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~-----------~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 87 DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGI-----------ERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSC-----------SSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT
T ss_pred CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCC-----------CcccccccCceECC-CCCEEEEecCCCEEEEECCC
Confidence 6778888877 88999999999876554322100 11223577888884 66788899988999999999
Q ss_pred CCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC-CCceEEEeeC-----CCCCceEEEEecCCCEEEE
Q psy13635 207 GTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-GGERVLLVKD-----RLGWPNGITLDVDNEKLYW 280 (357)
Q Consensus 207 g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-g~~~~~~~~~-----~l~~P~giaid~~~~~lY~ 280 (357)
|+........ ..|.++++.+ +|.+++++... ++|..++.+ |.....+-.. .+..|.++++. .++++|+
T Consensus 155 G~~~w~~~~~--~~~~~~~~~~-~g~~~v~~~~~--~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~-~~G~i~v 228 (276)
T 3no2_A 155 GQLLNSVKLS--GTPFSSAFLD-NGDCLVACGDA--HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL-QNGGLYI 228 (276)
T ss_dssp SCEEEEEECS--SCCCEEEECT-TSCEEEECBTT--SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC-TTSCEEE
T ss_pred CCEEEEEECC--CCccceeEcC-CCCEEEEeCCC--CeEEEEeCcCCcEEEEecCCCCCCccccccccceEc-CCCCEEE
Confidence 8877665432 5788999986 58888988874 589999999 7776666432 35669999998 6899999
Q ss_pred EeCC----------CCeEEEEeCCCCCeEEEec-CCCCceEEEEE
Q psy13635 281 CDAK----------TDKIEMIDFDGNNRRELIN-ENLPHVFGISL 314 (357)
Q Consensus 281 ~d~~----------~~~I~~~~~dG~~~~~i~~-~~~~~p~gia~ 314 (357)
++.. ..++..++.+|+-.=.+-. ..+..+.+++.
T Consensus 229 ~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~~ 273 (276)
T 3no2_A 229 CNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTICP 273 (276)
T ss_dssp EEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEEEE
T ss_pred EeccCccccccccCCceEEEECCCCCEEEEecCcccccceeeeee
Confidence 9952 3467778777754332221 23555666544
No 117
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.22 E-value=1.5e-08 Score=88.85 Aligned_cols=183 Identities=13% Similarity=0.040 Sum_probs=123.4
Q ss_pred EEEEEeCC----cEEEEEcCCCCcceE-eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcC
Q psy13635 43 MLLFATSK----DIRIANLSRPLKPVT-IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLI 117 (357)
Q Consensus 43 ~l~~~~~~----~i~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 117 (357)
.||.++.. .|+++|+..++.... ....-....|++++ +++||.++..++.++.++.+... ....+..+ .
T Consensus 54 ~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~---~~~ti~~~-~ 127 (262)
T 3nol_A 54 YFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLR---QVRSFNYD-G 127 (262)
T ss_dssp EEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCC---EEEEEECS-S
T ss_pred EEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCc---EEEEEECC-C
Confidence 67777744 699999977432222 22333345667775 78999999999999999998764 23333322 1
Q ss_pred CceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc-eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 118 TPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK-RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
.+.|++.| ++.||.+|. +++|..+++.... ...+.-.. . ...+..++.+... +|+||+..+.
T Consensus 128 eG~glt~d--g~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~--~----------g~~~~~lNELe~~--~G~lyan~w~ 190 (262)
T 3nol_A 128 EGWGLTHN--DQYLIMSDG-TPVLRFLDPESLTPVRTITVTA--H----------GEELPELNELEWV--DGEIFANVWQ 190 (262)
T ss_dssp CCCCEEEC--SSCEEECCS-SSEEEEECTTTCSEEEEEECEE--T----------TEECCCEEEEEEE--TTEEEEEETT
T ss_pred CceEEecC--CCEEEEECC-CCeEEEEcCCCCeEEEEEEecc--C----------CccccccceeEEE--CCEEEEEEcc
Confidence 44566655 899999995 7899999987543 33332111 1 1122345566654 7899999999
Q ss_pred CCeEEEEEcCCCc-eEEEecCC-----------CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEec
Q psy13635 197 TDRIEVCRLEGTH-RKVLVNTD-----------LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLL 250 (357)
Q Consensus 197 ~~~I~~~~~~g~~-~~~~~~~~-----------~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~ 250 (357)
.+.|.++|+.... ...+-..+ ...|+|||+||.+++||+|...= .+++.+.+
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W--p~~~ev~~ 254 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW--PKVFEITL 254 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC--SEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC--CceEEEEE
Confidence 9999999997544 34443221 24789999999999999998763 47877765
No 118
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.20 E-value=2.8e-09 Score=100.89 Aligned_cols=259 Identities=12% Similarity=0.070 Sum_probs=161.2
Q ss_pred EEEEeecCCCCeEEEEEe-----------CCcEEEEEcCCCCcceEe-cc------CCCcEEEEEEEccCCEEEEEeCC-
Q psy13635 31 FWYALSHHVAAQMLLFAT-----------SKDIRIANLSRPLKPVTI-IK------DLEEGAAIDYYYKKSMVCWTDHG- 91 (357)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~-----------~~~i~~~~~~~~~~~~~~-~~------~~~~~~~i~~d~~~~~ly~~d~~- 91 (357)
.. .++.+++...+|+++ .+.|..+|.........+ +. ....|.++.+++++.++|+++..
T Consensus 120 ~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 120 LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS
T ss_pred CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC
Confidence 45 777888888898887 346899998763322222 22 13468899999999999999875
Q ss_pred CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccC
Q psy13635 92 TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLP 171 (357)
Q Consensus 92 ~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~ 171 (357)
.+.|..+++..... ...+.. |....+.+.++..|++...++++..+++............+.
T Consensus 199 ~~~VsVID~~t~kv---v~~I~v----~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~----------- 260 (426)
T 3c75_H 199 APAVGVVDLEGKTF---DRMLDV----PDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFH----------- 260 (426)
T ss_dssp SCEEEEEETTTTEE---EEEEEC----CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCS-----------
T ss_pred CCeEEEEECCCCeE---EEEEEc----CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeec-----------
Confidence 78899999987641 222221 122233333456666666666666666533222211100000
Q ss_pred cccccCC--ceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC---------CCCCceE---EEEeCCCCEEEEEe
Q psy13635 172 TIEVEHP--DGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT---------DLVEPRA---ITLSPAHGYLFWSD 237 (357)
Q Consensus 172 ~~~~~~p--~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~---------~~~~P~g---iavd~~~g~Ly~~d 237 (357)
.. ..| ..+++++.++.+|++.. .+++.+++..+.....+..- ....|.+ +++++.+++||+++
T Consensus 261 v~--~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~ 337 (426)
T 3c75_H 261 TE--DELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLV 337 (426)
T ss_dssp CT--TSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEE
T ss_pred cC--CCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEe
Confidence 00 112 12355666778887765 46899998876554332110 0123555 89999999999997
Q ss_pred CCC-------CCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCC-EEEEEeCCCCeEEEEeCCCCCeEEEecCCCCce
Q psy13635 238 WNE-------KRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNE-KLYWCDAKTDKIEMIDFDGNNRRELINENLPHV 309 (357)
Q Consensus 238 ~~~-------~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~-~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p 309 (357)
... ....|..++........-+..+ ..|.+|++++++. ++|++....+.|..+|........-+......|
T Consensus 338 ~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P 416 (426)
T 3c75_H 338 DQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGP 416 (426)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSC
T ss_pred cccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCC
Confidence 421 0137999998866554433322 3699999998888 899999999999999987655433332234566
Q ss_pred EEE
Q psy13635 310 FGI 312 (357)
Q Consensus 310 ~gi 312 (357)
.++
T Consensus 417 ~~i 419 (426)
T 3c75_H 417 QII 419 (426)
T ss_dssp CEE
T ss_pred cEE
Confidence 654
No 119
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.20 E-value=4.8e-09 Score=92.05 Aligned_cols=158 Identities=13% Similarity=0.110 Sum_probs=117.3
Q ss_pred CceEEEeCCCCeEEEEeCCCCeEEEEEcCC-CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceE
Q psy13635 178 PDGVAVDWVARNLYWTDTGTDRIEVCRLEG-THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERV 256 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~~I~~~~~~g-~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~ 256 (357)
-.||+++ ++.||.+....++|.++++.. +....+ ...-....|++++ +++||.+++.. +.++.++.+.....
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~--~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTE--GLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSS--CEEEEEETTTTEEE
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccC--CEEEEEECCcCcEE
Confidence 3699998 689999999988999999874 444444 2222234567776 68999999985 59999998765554
Q ss_pred EEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe-EEEecC----CCCceEEEEEECCEEEEEeCCCCeEEE
Q psy13635 257 LLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR-RELINE----NLPHVFGISLLGDYVYWTDWQRRSIDR 331 (357)
Q Consensus 257 ~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~-~~i~~~----~~~~p~gia~~~~~ly~td~~~~~I~~ 331 (357)
.-+... ..+.|++-| +++||.+| ++++|+.+|+..... ..+... ....+..|.+.+|.||...|.++.|.+
T Consensus 130 ~ti~~~-~eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 130 RTTRYS-GEGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLE 205 (268)
T ss_dssp EEEECS-SCCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEE
T ss_pred EEEeCC-CceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEE
Confidence 444332 345677765 78999999 689999999876443 223221 234567788889999999999999999
Q ss_pred EeCccCceeEEEecc
Q psy13635 332 VNKITGNDREVIIER 346 (357)
Q Consensus 332 ~~~~~g~~~~~i~~~ 346 (357)
+|+.+|+....|-..
T Consensus 206 IDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 206 IDPATGTVVGVIDAS 220 (268)
T ss_dssp ECTTTCBEEEEEECH
T ss_pred EeCCCCcEEEEEECC
Confidence 999999988887543
No 120
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.18 E-value=3.8e-08 Score=89.47 Aligned_cols=217 Identities=11% Similarity=-0.019 Sum_probs=142.0
Q ss_pred CCcEEEEEcCCCCcceEeccCCC--cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe-CC-----cCCce
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLE--EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NG-----LITPD 120 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~--~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-~~-----~~~p~ 120 (357)
.+.|+++|+.+.. ......... .|.++++++.++.+|+++..++.|+.+++++.. ....+. .. ...|.
T Consensus 20 ~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~---~~~~~~~~~~~~~~~~~~~ 95 (349)
T 1jmx_B 20 PNNLHVVDVASDT-VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK---NTFHANLSSVPGEVGRSMY 95 (349)
T ss_dssp TTEEEEEETTTTE-EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEESCCSTTEEEECSS
T ss_pred CCeEEEEECCCCc-EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc---EEEEEEccccccccccccc
Confidence 5679999987632 222222222 688999999888899999888999999998653 122222 21 23489
Q ss_pred eEEEEcCCCeEEEEeCC-----------CCEEEEEEcCCCc-eE--EEEecCCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 121 GLAIDWLTEKLYWTDSE-----------TNKLEVSSLDGKK-RK--VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 121 glavd~~~~~ly~td~~-----------~~~I~~~~~~g~~-~~--~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
++++++.++.||+++.. .+.|.++++.... .+ ..... -..+.++++++.
T Consensus 96 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----------------~~~~~~~~~s~d 158 (349)
T 1jmx_B 96 SFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-----------------PRQVYLMRAADD 158 (349)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-----------------CSSCCCEEECTT
T ss_pred ceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-----------------CCcccceeECCC
Confidence 99999988899998854 5789998876422 11 11111 124677888876
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCceEEEecCC-------------------------------------------------
Q psy13635 187 ARNLYWTDTGTDRIEVCRLEGTHRKVLVNTD------------------------------------------------- 217 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~------------------------------------------------- 217 (357)
+. +|++.. .|.+.++........+...
T Consensus 159 g~-l~~~~~---~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 159 GS-LYVAGP---DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp SC-EEEESS---SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred Cc-EEEccC---cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 65 887532 3777776533222111111
Q ss_pred -------------------CCCceEEEEeC-CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCE
Q psy13635 218 -------------------LVEPRAITLSP-AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEK 277 (357)
Q Consensus 218 -------------------~~~P~giavd~-~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~ 277 (357)
...|.+++++| ....||.+ . +.|...++........+..+ ..|.++++++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~---~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~ 308 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--L---NRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDK 308 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--E---SEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSC
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--c---CeEEEEECccCeEEEEEcCC-CCccceEECCCCCE
Confidence 01456677778 77788888 2 48999998766554444332 46889999987788
Q ss_pred EEEEeCCCCeEEEEeCCCCC
Q psy13635 278 LYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 278 lY~~d~~~~~I~~~~~dG~~ 297 (357)
||++. ..+.|..++.+...
T Consensus 309 l~~~~-~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 309 LYLGG-TFNDLAVFNPDTLE 327 (349)
T ss_dssp EEEES-BSSEEEEEETTTTE
T ss_pred EEEec-CCCeEEEEeccccc
Confidence 98864 45889999986543
No 121
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.16 E-value=1.7e-07 Score=88.51 Aligned_cols=227 Identities=11% Similarity=0.076 Sum_probs=159.4
Q ss_pred CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC--CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC
Q psy13635 50 KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT--EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL 127 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~ 127 (357)
..|+..|+++. ....+........+++++|++..|+++.... ..|+..++.+.. ...+...-..+..+++.+.
T Consensus 159 ~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~----~~~l~~~~~~~~~~~~spd 233 (415)
T 2hqs_A 159 YELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA----VRQVASFPRHNGAPAFSPD 233 (415)
T ss_dssp EEEEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----EEEEECCSSCEEEEEECTT
T ss_pred ceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc----EEEeecCCCcccCEEEcCC
Confidence 57999999873 4455555556788999999999998887643 589999998764 3334433346788999998
Q ss_pred CCeEEEEeCC--CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC--CeEEEE
Q psy13635 128 TEKLYWTDSE--TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT--DRIEVC 203 (357)
Q Consensus 128 ~~~ly~td~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~--~~I~~~ 203 (357)
++.|+++... ...|+..++.+.....+... -.....+++.+.+..|+++.... .+|+..
T Consensus 234 g~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~-----------------~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 234 GSKLAFALSKTGSLNLYVMDLASGQIRQVTDG-----------------RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEECCCC-----------------SSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEEecCCCceEEEEECCCCCEEeCcCC-----------------CCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 8888877643 45699999877654433211 12356678887787788776433 379999
Q ss_pred EcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC
Q psy13635 204 RLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA 283 (357)
Q Consensus 204 ~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~ 283 (357)
++++.....+.. .......++++|.+..|+++........|+..++++.....+.. . .....+++.+.+..|+++..
T Consensus 297 d~~~~~~~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~-~-~~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 297 NINGGAPQRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS-T-FLDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp ETTSSCCEECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCC-S-SSCEEEEECTTSSEEEEEEE
T ss_pred ECCCCCEEEEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecC-C-CCcCCeEEcCCCCEEEEEEc
Confidence 988766544432 23456789999988888888754222589999998776655432 2 36788999987787887765
Q ss_pred CCC--eEEEEeCCCCCeEEE
Q psy13635 284 KTD--KIEMIDFDGNNRREL 301 (357)
Q Consensus 284 ~~~--~I~~~~~dG~~~~~i 301 (357)
..+ .|+.++++|...+.+
T Consensus 374 ~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 374 QGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp ETTEEEEEEEETTSCCEEEC
T ss_pred CCCccEEEEEECCCCcEEEe
Confidence 444 799999998776544
No 122
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=1.5e-08 Score=94.37 Aligned_cols=260 Identities=12% Similarity=0.071 Sum_probs=154.2
Q ss_pred eecCCCCeEEEEEe-----------CCcEEEEEcCCCCcceEe-ccC------CCcEEEEEEEccCCEEEEEeCC-CCeE
Q psy13635 35 LSHHVAAQMLLFAT-----------SKDIRIANLSRPLKPVTI-IKD------LEEGAAIDYYYKKSMVCWTDHG-TEMI 95 (357)
Q Consensus 35 ~~~~~~~~~l~~~~-----------~~~i~~~~~~~~~~~~~~-~~~------~~~~~~i~~d~~~~~ly~~d~~-~~~I 95 (357)
++.++...++|+++ .+.|..+|..+......+ +.. ...|.++++++++.++|+++.. .+.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 66677777888887 245899999773322222 221 2378999999999999999974 7899
Q ss_pred EEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC-CceEEEEecCCCCcceeeeeccCccc
Q psy13635 96 SCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG-KKRKVLYWEDIDQPRAIASYKLPTIE 174 (357)
Q Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g-~~~~~~~~~~~~~p~~i~~~~~~~~~ 174 (357)
..+++..... ..++-..+. ...+ +.+...|++...++++..+++.. ..........+. +.. ..
T Consensus 163 sVID~~t~~v--v~tI~v~g~----~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~-~~~--------~~ 226 (386)
T 3sjl_D 163 GVVDLEGKAF--KRMLDVPDC----YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH-PED--------EF 226 (386)
T ss_dssp EEEETTTTEE--EEEEECCSE----EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS-CTT--------SC
T ss_pred EEEECCCCcE--EEEEECCCc----ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceec-ccc--------cc
Confidence 9999987741 122211111 1112 22333344444445555555532 111111101100 000 00
Q ss_pred ccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC---------CCCCce---EEEEeCCCCEEEEEeCCC--
Q psy13635 175 VEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT---------DLVEPR---AITLSPAHGYLFWSDWNE-- 240 (357)
Q Consensus 175 ~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~---------~~~~P~---giavd~~~g~Ly~~d~~~-- 240 (357)
-....+++..+|+++|... .++++.++..+....++..- .-..|. .+++++..++||++....
T Consensus 227 --~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~ 303 (386)
T 3sjl_D 227 --LINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE 303 (386)
T ss_dssp --BCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT
T ss_pred --ccccceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccc
Confidence 0011256656777766544 46899999887654332110 011233 388899999999986410
Q ss_pred --C---CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCC-EEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEE
Q psy13635 241 --K---RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNE-KLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISL 314 (357)
Q Consensus 241 --~---~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~-~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~ 314 (357)
+ ..+|+.+++.......-+..+ ..|.+|++++++. +||.++...+.|..+|........-+ ....+|..|.+
T Consensus 304 ~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i-~~~~~p~~l~~ 381 (386)
T 3sjl_D 304 WRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV-NQLGHGPQVIT 381 (386)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEE-CCCCSSCCEEE
T ss_pred cccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEe-cCCCCCceeEE
Confidence 0 148999999876654443322 3688999997765 79999999999999998654443333 35678877766
Q ss_pred E
Q psy13635 315 L 315 (357)
Q Consensus 315 ~ 315 (357)
.
T Consensus 382 s 382 (386)
T 3sjl_D 382 T 382 (386)
T ss_dssp E
T ss_pred C
Confidence 4
No 123
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.12 E-value=1.6e-08 Score=98.31 Aligned_cols=245 Identities=13% Similarity=0.118 Sum_probs=160.7
Q ss_pred CeEEEEEeC--CcEEEEEcCCCCcce-EeccCCCcEEEEEE-E-ccCCEEEEEeC-----------------CCCeEEEE
Q psy13635 41 AQMLLFATS--KDIRIANLSRPLKPV-TIIKDLEEGAAIDY-Y-YKKSMVCWTDH-----------------GTEMISCC 98 (357)
Q Consensus 41 ~~~l~~~~~--~~i~~~~~~~~~~~~-~~~~~~~~~~~i~~-d-~~~~~ly~~d~-----------------~~~~I~~~ 98 (357)
..++++.+. ..|.+||++.-+... +.+++...|+++++ . ++.+++|.+.. ..+.+..+
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 346666664 349999997732222 13456678999998 4 88999999952 22367778
Q ss_pred EcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC--------------CEEEEEEc--------CCCceE----
Q psy13635 99 TFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET--------------NKLEVSSL--------DGKKRK---- 152 (357)
Q Consensus 99 ~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~--------------~~I~~~~~--------~g~~~~---- 152 (357)
+.+... ....+...+ +|+++++++.++.+|+|+..+ ..|.+++. +|+...
T Consensus 181 D~~t~~--v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 181 DADKWE--VAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp ETTTTE--EEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred ECCCCe--EEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 887653 113333334 799999999999999999776 34555542 333221
Q ss_pred EEEecCC--C-C-cceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCc----------eEEEec-CC
Q psy13635 153 VLYWEDI--D-Q-PRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTH----------RKVLVN-TD 217 (357)
Q Consensus 153 ~~~~~~~--~-~-p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~----------~~~~~~-~~ 217 (357)
.++.... . . .+-|. .-..|.|+++.|.+.++|+++...++|.+++.+... ..++.. .-
T Consensus 257 ~VID~~~~~~~~~~~~Ip-------vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIP-------IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp EEEECSGGGCCSSEEEEE-------EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred EEEeCcccCCceeEEEEe-------cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 1111111 0 0 01111 124899999999999999999999999999988431 011111 22
Q ss_pred CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC----------CceEEEeeCCCCCc------eEEEEecCCCEEEEE
Q psy13635 218 LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG----------GERVLLVKDRLGWP------NGITLDVDNEKLYWC 281 (357)
Q Consensus 218 ~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg----------~~~~~~~~~~l~~P------~giaid~~~~~lY~~ 281 (357)
...|.++++++. |++|.+..-. +.|.+.+.+. .....-+..+ .+| .|+++++++..||.+
T Consensus 330 G~gP~h~aF~~d-G~aY~t~~ld--sqV~kwdi~~a~~~~~g~~~~~vi~kidV~-yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 330 GLGPLHTAFDGR-GNAYTSLFLD--SQVVKWNIEDAIRAYAGEKVDPIKDKLDVH-YQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp CSCEEEEEECTT-SEEEEEETTT--TEEEEEEHHHHHHHHHTCSCCCEEEEEECS-SCEEEEEETTTTSTTCCSSEEEEE
T ss_pred CCCcceEEECCC-CeEEEEEecC--CcEEEEEhhHhhhhhcccccceeEEEeecc-cccccceeccceEeCCCCCEEEEc
Confidence 357999999986 5999999885 4999999875 1122222222 344 567778889999999
Q ss_pred eCCC-CeE-----------EEEeCCCCCeEE
Q psy13635 282 DAKT-DKI-----------EMIDFDGNNRRE 300 (357)
Q Consensus 282 d~~~-~~I-----------~~~~~dG~~~~~ 300 (357)
+..+ .++ ..++..|...+.
T Consensus 406 Nk~skdr~~~~gp~~~~~~ql~dis~~~m~l 436 (595)
T 1fwx_A 406 SKFSKDRFLNVGPLKPENDQLIDISGDKMVL 436 (595)
T ss_dssp ESCCTTSSCCCCSSCCEEEEEEECSSSSCEE
T ss_pred CCCCccccccCCCCCCCcceEEEcCCCcEEE
Confidence 9877 666 778887765543
No 124
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.07 E-value=4.3e-08 Score=92.32 Aligned_cols=223 Identities=14% Similarity=0.082 Sum_probs=145.6
Q ss_pred CCCeEEEEEeC--CcEEEEEcCCC-C--cceEecc--------CCCcEEEEEEEccCCEEEEEeCCC------CeEEEEE
Q psy13635 39 VAAQMLLFATS--KDIRIANLSRP-L--KPVTIIK--------DLEEGAAIDYYYKKSMVCWTDHGT------EMISCCT 99 (357)
Q Consensus 39 ~~~~~l~~~~~--~~i~~~~~~~~-~--~~~~~~~--------~~~~~~~i~~d~~~~~ly~~d~~~------~~I~~~~ 99 (357)
.+..+|++++. ..|..+|.... . +....++ +...|+.+...+.+ ||++..++ +.|..++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEE
Confidence 66888999884 46999998542 2 2222231 45589999998754 99987765 6788888
Q ss_pred cCCCCcceeEEEEeCC-c--CCceeEEEEcCCCeEEEEeC------------------CCCEEEEEEcCCCceEEEEecC
Q psy13635 100 FDGNNVGSKHNVITNG-L--ITPDGLAIDWLTEKLYWTDS------------------ETNKLEVSSLDGKKRKVLYWED 158 (357)
Q Consensus 100 ~~g~~~~~~~~~~~~~-~--~~p~glavd~~~~~ly~td~------------------~~~~I~~~~~~g~~~~~~~~~~ 158 (357)
..+.. ....+..+ - ..+..+.+.+..+.+|.++. ..++|.+++++.......+.-+
T Consensus 171 ~~T~~---v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 171 HYSFE---PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp TTTCC---EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred CCCCe---EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 87664 23333222 1 12333555777777777763 3789999999865322222111
Q ss_pred CCCcceeeeeccCcccccCCceEEE--eCCCCeEEEEeC-----CCCeEEEEEcCCCce---EEE-ecC-----C-----
Q psy13635 159 IDQPRAIASYKLPTIEVEHPDGVAV--DWVARNLYWTDT-----GTDRIEVCRLEGTHR---KVL-VNT-----D----- 217 (357)
Q Consensus 159 ~~~p~~i~~~~~~~~~~~~p~glav--D~~~~~lY~td~-----~~~~I~~~~~~g~~~---~~~-~~~-----~----- 217 (357)
. .-..|..|++ ++.+..+|++.. ..+.|.++..++... .++ +.. .
T Consensus 248 --~------------~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~ 313 (462)
T 2ece_A 248 --E------------ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEIL 313 (462)
T ss_dssp --T------------TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGG
T ss_pred --C------------CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccc
Confidence 0 1125777767 888999999998 777887766654211 111 111 0
Q ss_pred ------CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC-CCceEEE--eeCC-C-------------CCceEEEEecC
Q psy13635 218 ------LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-GGERVLL--VKDR-L-------------GWPNGITLDVD 274 (357)
Q Consensus 218 ------~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-g~~~~~~--~~~~-l-------------~~P~giaid~~ 274 (357)
...|.+|.+++.+.+||+++++. +.|..++.+ ....+.+ +..+ . ..|.+++++++
T Consensus 314 ~~f~~~~~~pa~I~lS~DGrfLYVSnrg~--d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD 391 (462)
T 2ece_A 314 KPFKAVPPLVTDIDISLDDKFLYLSLWGI--GEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD 391 (462)
T ss_dssp GGGTEECCCCCCEEECTTSCEEEEEETTT--TEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT
T ss_pred cccccCCCceeEEEECCCCCEEEEEeCCC--CEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC
Confidence 24689999999999999999995 599998874 3222222 2222 1 15999999999
Q ss_pred CCEEEEEe
Q psy13635 275 NEKLYWCD 282 (357)
Q Consensus 275 ~~~lY~~d 282 (357)
+.+||+++
T Consensus 392 Gk~LyVaN 399 (462)
T 2ece_A 392 GRRVYVTN 399 (462)
T ss_dssp SSEEEEEC
T ss_pred CCEEEEEc
Confidence 99999999
No 125
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.05 E-value=2.5e-09 Score=99.54 Aligned_cols=253 Identities=9% Similarity=-0.007 Sum_probs=161.4
Q ss_pred EeecCCCCeEEEEEe-----------CCcEEEEEcCCCCcceEe-cc------CCCcEEEEEEEccCCEEEEEeCC-CCe
Q psy13635 34 ALSHHVAAQMLLFAT-----------SKDIRIANLSRPLKPVTI-IK------DLEEGAAIDYYYKKSMVCWTDHG-TEM 94 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-----------~~~i~~~~~~~~~~~~~~-~~------~~~~~~~i~~d~~~~~ly~~d~~-~~~ 94 (357)
.+..++....+++++ .+.|..+|+........+ +. ....|.++++++++.++|+++.. ++.
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 667777777888887 356999999774332222 22 12579999999999999999875 456
Q ss_pred EEE--EEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC----CceEEEEecCCCCcceeeee
Q psy13635 95 ISC--CTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG----KKRKVLYWEDIDQPRAIASY 168 (357)
Q Consensus 95 I~~--~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g----~~~~~~~~~~~~~p~~i~~~ 168 (357)
+.. +++.. . .++-. |.+..+.+.++..|++...++++..++++. ... ++.... ..+
T Consensus 149 v~V~~iD~~t-v----~~i~v-----~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~-v~~~~t----~~i--- 210 (368)
T 1mda_H 149 AGLSVPGASD-D----QLTKS-----ASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI-VGAQCT----GAQ--- 210 (368)
T ss_dssp EEEEETTTEE-E----EEEEC-----SSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE-CCCCSC----TTS---
T ss_pred EEEEEEchhh-c----eEEEC-----CCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe-EEEEee----eee---
Confidence 666 45433 1 22211 222334456778899888888888888765 111 110000 000
Q ss_pred ccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC---------CCCCceE---EEEeCCCCEEEEE
Q psy13635 169 KLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT---------DLVEPRA---ITLSPAHGYLFWS 236 (357)
Q Consensus 169 ~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~---------~~~~P~g---iavd~~~g~Ly~~ 236 (357)
+. -..|. + .+..+.+||+.. +.+..++..+.....+..- ....|.+ +++++..+++|++
T Consensus 211 --~v--g~~P~--~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~ 281 (368)
T 1mda_H 211 --NC--SSQAA--Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp --CB--CSCCE--E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred --eC--CCCcc--c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEE
Confidence 00 12454 3 556788888877 7899999876543333211 1224666 8999999999998
Q ss_pred eC-C-C-----CCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC-CCCeEEEEeCCCCCeEEEecCCCCc
Q psy13635 237 DW-N-E-----KRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA-KTDKIEMIDFDGNNRRELINENLPH 308 (357)
Q Consensus 237 d~-~-~-----~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~-~~~~I~~~~~dG~~~~~i~~~~~~~ 308 (357)
.. . . . ..+..+++.......-+..+ ..|.||++++++.++|++.. ..+.|..+|.........+. -...
T Consensus 282 ~~~~~~~~~~~~-~~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~-vg~~ 358 (368)
T 1mda_H 282 TVEHSRSCLAAA-ENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE-LDKG 358 (368)
T ss_dssp EEECSSCTTSCE-EEEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC-CCSC
T ss_pred eccccCcccccC-CCEEEEECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE-CCCC
Confidence 65 2 1 1 24557887765443322222 26999999977777999998 69999999997655444442 4678
Q ss_pred eEEEEEEC
Q psy13635 309 VFGISLLG 316 (357)
Q Consensus 309 p~gia~~~ 316 (357)
|.||++.+
T Consensus 359 P~~i~~~~ 366 (368)
T 1mda_H 359 PESLSVQN 366 (368)
T ss_dssp CCEEECCC
T ss_pred CCEEEeec
Confidence 99998753
No 126
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.04 E-value=3.3e-08 Score=96.14 Aligned_cols=238 Identities=8% Similarity=0.053 Sum_probs=156.5
Q ss_pred cCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe-CCcCCceeEEE-E-cCCCeEEEEe-----------------CCCCE
Q psy13635 81 KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAI-D-WLTEKLYWTD-----------------SETNK 140 (357)
Q Consensus 81 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~p~glav-d-~~~~~ly~td-----------------~~~~~ 140 (357)
++.++|++|..+++|.+++++... ...++. .....|.|+++ . +.++.+|.+. ...+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~---~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMK---CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTE---EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCce---EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 578999999999999999999874 233223 33467999998 4 7899999994 23457
Q ss_pred EEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC--------------e-------
Q psy13635 141 LEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD--------------R------- 199 (357)
Q Consensus 141 I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~--------------~------- 199 (357)
+.+++.+......-+. .. ..|.++++++.++.+|+|..... .
T Consensus 177 vtvID~~t~~v~~qI~---------------Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~ 239 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVL---------------VS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA 239 (595)
T ss_dssp EEEEETTTTEEEEEEE---------------ES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred EEEEECCCCeEEEEEE---------------eC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence 7777777543322221 11 26999999999999999997652 2
Q ss_pred ----------------EEEEEcCC---CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce-----
Q psy13635 200 ----------------IEVCRLEG---THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER----- 255 (357)
Q Consensus 200 ----------------I~~~~~~g---~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~----- 255 (357)
|.++|... +.....+.. -..|.|+.++|++.++|+++.... +|..++.+....
T Consensus 240 ~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~--~VsVid~~~~~~~~~~~ 316 (595)
T 1fwx_A 240 EIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSP--TVTVLDVTRFDAVFYEN 316 (595)
T ss_dssp HHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSS--BEEEEEGGGHHHHHHSC
T ss_pred ceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCC--eEEEEECcccccccccc
Confidence 33444332 110111111 258999999999889999999964 999999874310
Q ss_pred -----EEEee-CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC-------CCeEEEecC--CCCce------EEEE-
Q psy13635 256 -----VLLVK-DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG-------NNRRELINE--NLPHV------FGIS- 313 (357)
Q Consensus 256 -----~~~~~-~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG-------~~~~~i~~~--~~~~p------~gia- 313 (357)
..... .--..|.++++|+.+ ++|++..-.+.|.+++.+. .....++.. -..+| .|++
T Consensus 317 l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~ 395 (595)
T 1fwx_A 317 ADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETL 395 (595)
T ss_dssp CCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTST
T ss_pred cCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEe
Confidence 11111 122579999999655 9999999999999999765 111111111 12233 2233
Q ss_pred -EECCEEEEEeCCC-CeE-----------EEEeCccCceeEEE
Q psy13635 314 -LLGDYVYWTDWQR-RSI-----------DRVNKITGNDREVI 343 (357)
Q Consensus 314 -~~~~~ly~td~~~-~~I-----------~~~~~~~g~~~~~i 343 (357)
.|+.+||.++..+ .++ ..++. +|...+++
T Consensus 396 ~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~di-s~~~m~lv 437 (595)
T 1fwx_A 396 DATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDI-SGDKMVLV 437 (595)
T ss_dssp TCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEEC-SSSSCEEE
T ss_pred CCCCCEEEEcCCCCccccccCCCCCCCcceEEEc-CCCcEEEE
Confidence 3578999999877 565 56676 45544444
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.03 E-value=8.1e-07 Score=83.88 Aligned_cols=235 Identities=15% Similarity=0.091 Sum_probs=157.7
Q ss_pred CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC--CEEEEEEcCCCceEEEEecCCCCcceeeeecc
Q psy13635 93 EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET--NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKL 170 (357)
Q Consensus 93 ~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~--~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~ 170 (357)
+.|+..+++|.. ...+...-.....+++.+.++.|+++.... ..|...++.+.....+....
T Consensus 159 ~~i~i~d~~g~~----~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~------------ 222 (415)
T 2hqs_A 159 YELRVSDYDGYN----QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP------------ 222 (415)
T ss_dssp EEEEEEETTSCS----CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS------------
T ss_pred ceEEEEcCCCCC----CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC------------
Confidence 578888988764 333333334678899999888898887543 68999998776555443211
Q ss_pred CcccccCCceEEEeCCCCeEEEEeCCC--CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEE
Q psy13635 171 PTIEVEHPDGVAVDWVARNLYWTDTGT--DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERS 248 (357)
Q Consensus 171 ~~~~~~~p~glavD~~~~~lY~td~~~--~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~ 248 (357)
.....+++.|.+..|+++.... ..|+..++.+.....+.. .......++++|.+..|+++.......+|+..
T Consensus 223 -----~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 223 -----RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp -----SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred -----CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 2456788888888888776543 469999988765544433 33457789999987778887653223589999
Q ss_pred ecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCC--CCeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeC
Q psy13635 249 LLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAK--TDKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDW 324 (357)
Q Consensus 249 ~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~--~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~ 324 (357)
++++.....+.. .......+++++++..|+++... ...|+..+.++.....+.. . .....+++. +..|+++..
T Consensus 297 d~~~~~~~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~-~-~~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 297 NINGGAPQRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS-T-FLDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp ETTSSCCEECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCC-S-SSCEEEEECTTSSEEEEEEE
T ss_pred ECCCCCEEEEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecC-C-CCcCCeEEcCCCCEEEEEEc
Confidence 998876554432 23456788999888888887754 4589999998776654432 2 256677775 456777665
Q ss_pred CCC--eEEEEeCccCceeEEEecccCCceee
Q psy13635 325 QRR--SIDRVNKITGNDREVIIERSCTGVTR 353 (357)
Q Consensus 325 ~~~--~I~~~~~~~g~~~~~i~~~l~~p~~i 353 (357)
..+ .|+.++. +|+....+..+-.....+
T Consensus 374 ~~~~~~l~~~d~-~g~~~~~l~~~~~~v~~~ 403 (415)
T 2hqs_A 374 QGMGSVLNLVST-DGRFKARLPATDGQVKFP 403 (415)
T ss_dssp ETTEEEEEEEET-TSCCEEECCCSSSEEEEE
T ss_pred CCCccEEEEEEC-CCCcEEEeeCCCCCCcCC
Confidence 444 7889998 566666665543344333
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.03 E-value=1.7e-07 Score=82.53 Aligned_cols=226 Identities=12% Similarity=0.093 Sum_probs=149.6
Q ss_pred CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCC-CCcceeEEEEeCC--cCCceeEEEEc
Q psy13635 50 KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDG-NNVGSKHNVITNG--LITPDGLAIDW 126 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~~~~--~~~p~glavd~ 126 (357)
..|+.+|+.+. ...........+.++++++.+..|+++. .+.|+..++++ .. ...+... ...+..+++.+
T Consensus 22 ~~i~~~d~~~~-~~~~~~~~~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 22 SSIEIFNIRTR-KMRVVWQTPELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPS----PEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp EEEEEEETTTT-EEEEEEEESSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCS----CEECCCTTCCCBCSCCEECT
T ss_pred eeEEEEeCCCC-ceeeeccCCcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCC----ceEeccccccccccceEECC
Confidence 45777887663 3344444455788999999888888875 56899999988 64 2222222 24567899998
Q ss_pred CCCeEEEEeCC---CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC--eEE
Q psy13635 127 LTEKLYWTDSE---TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD--RIE 201 (357)
Q Consensus 127 ~~~~ly~td~~---~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~--~I~ 201 (357)
.++.|+++... ..+|..++.++.....+... ..+..+++.+.+..|+++....+ +|+
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------------~~~~~~~~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN------------------LPSYWHGWSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS------------------SSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecC------------------CCccceEECCCCCEEEEEECCCCceEEE
Confidence 88888887732 57888888876654433211 13556778877888886655445 566
Q ss_pred EEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEE
Q psy13635 202 VCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWC 281 (357)
Q Consensus 202 ~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~ 281 (357)
.++.++.....+.. ....+..++++|.+..|+++.......+|+.++.++.....+. ........+++++.+..|+++
T Consensus 157 ~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 157 SMDIDSGVETRLTH-GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp EEETTTCCEEECCC-SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSSEEEEE
T ss_pred EEECCCCcceEccc-CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCCEEEEE
Confidence 66676655544432 3356789999998777888764222368888888776655543 222345678898877788776
Q ss_pred eCC----------CCeEEEEeCCCCCeEEEe
Q psy13635 282 DAK----------TDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 282 d~~----------~~~I~~~~~dG~~~~~i~ 302 (357)
... ...|+..++++.....+.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 542 256899998876554443
No 129
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.00 E-value=2.2e-07 Score=93.46 Aligned_cols=281 Identities=12% Similarity=0.073 Sum_probs=171.2
Q ss_pred EEeecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCC-----CCcce
Q psy13635 33 YALSHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDG-----NNVGS 107 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g-----~~~~~ 107 (357)
.+++-++. ..++++....|+..|+.++ ....+......+..++++|++..|.++. ++.|+..++++ ..
T Consensus 85 ~~~~~spd-~~~~~~~~~~i~~~d~~~~-~~~~l~~~~~~~~~~~~SpdG~~la~~~--~~~i~v~~~~~~~~~~g~--- 157 (706)
T 2z3z_A 85 FRTLDAGR-GLVVLFTQGGLVGFDMLAR-KVTYLFDTNEETASLDFSPVGDRVAYVR--NHNLYIARGGKLGEGMSR--- 157 (706)
T ss_dssp EEEEETTT-TEEEEEETTEEEEEETTTT-EEEEEECCTTCCTTCEECTTSSEEEEEE--TTEEEEEECBCTTSCCCC---
T ss_pred eeEEECCC-CeEEEEECCEEEEEECCCC-ceEEccCCcccccCCcCCCCCCEEEEEE--CCeEEEEecCcccccCCC---
Confidence 34445555 6788888889999999773 3334433344566678999888888763 47899999887 43
Q ss_pred eEEEEeCCcC--------------CceeEEEEcCCCeEEEEeC--------------------------------CCCEE
Q psy13635 108 KHNVITNGLI--------------TPDGLAIDWLTEKLYWTDS--------------------------------ETNKL 141 (357)
Q Consensus 108 ~~~~~~~~~~--------------~p~glavd~~~~~ly~td~--------------------------------~~~~I 141 (357)
...+...+.. .+.++++.+.++.|+++.. ...+|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 1222222211 2578999998888888751 23567
Q ss_pred EEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC----CeEEEEEcCCC-ceEEEecC
Q psy13635 142 EVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT----DRIEVCRLEGT-HRKVLVNT 216 (357)
Q Consensus 142 ~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~----~~I~~~~~~g~-~~~~~~~~ 216 (357)
.+.++++.....+... ...-..+..+++.+.++.|+++.... ..|...+.++. ....+...
T Consensus 238 ~~~d~~~~~~~~~~~~--------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~ 303 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTG--------------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE 303 (706)
T ss_dssp EEEETTTTEEEECCCC--------------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEECCCCceEeeccC--------------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc
Confidence 7777766543332110 00112345678887777888754332 27888888765 44444321
Q ss_pred C----CCCceEEEEeC--CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceE-EEEecCCCEEEEEeCCCC---
Q psy13635 217 D----LVEPRAITLSP--AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNG-ITLDVDNEKLYWCDAKTD--- 286 (357)
Q Consensus 217 ~----~~~P~giavd~--~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~g-iaid~~~~~lY~~d~~~~--- 286 (357)
. ......++++| .+..||.++... ..+|+.++.+|.....+. .+-..... ++++++++.||++....+
T Consensus 304 ~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g-~~~l~~~~~~~~~~~~l~-~~~~~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 304 TDKHYVEPLHPLTFLPGSNNQFIWQSRRDG-WNHLYLYDTTGRLIRQVT-KGEWEVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp ECSSCCCCCSCCEECTTCSSEEEEEECTTS-SCEEEEEETTSCEEEECC-CSSSCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred cCCCeECccCCceeecCCCCEEEEEEccCC-ccEEEEEECCCCEEEecC-CCCeEEEeeeEEcCCCCEEEEEecCCCCce
Confidence 1 11235688988 644555554443 368999888776555553 22222334 789988889999877654
Q ss_pred -eEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCC---CCeEEEEeCccCc
Q psy13635 287 -KIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQ---RRSIDRVNKITGN 338 (357)
Q Consensus 287 -~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~---~~~I~~~~~~~g~ 338 (357)
.|+.++.++...+.+. .......+++. +..+.++... ...|+..+..+++
T Consensus 382 ~~l~~~d~~~~~~~~l~--~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 382 RHFYCIDIKGGKTKDLT--PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp BEEEEEETTCCCCEESC--CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEEEEcCCCCceecc--CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 8999998776554443 23345566665 3455544222 2568888875554
No 130
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.98 E-value=1.1e-05 Score=78.60 Aligned_cols=284 Identities=11% Similarity=0.110 Sum_probs=181.0
Q ss_pred CCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc
Q psy13635 38 HVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL 116 (357)
Q Consensus 38 ~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 116 (357)
++....++.+. ...|+..+.++ ..............++++.+....|. +-..++.|...+.++.. ...+....
T Consensus 271 ~~d~~~l~~~~~d~~i~~w~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~-t~~~d~~i~~w~~~~~~----~~~~~~~~ 344 (577)
T 2ymu_A 271 RPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVWGVAFSPDGQTIA-SASDDKTVKLWNRNGQH----LQTLTGHS 344 (577)
T ss_dssp CTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTSCE----EEEECCCS
T ss_pred cCCCCEEEEEeCCCEEEEEeCCC-cEEEEEecCCCCeEEEEECCCCCEEE-EEeCCCeEEEEeCCCCe----eEEEeCCC
Confidence 34444454444 45677788765 33333444556788999998666554 44456778888887763 33344444
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
..+.++++.+.++.|. +-...+.|...+.++.....+.... ..+.++++.+.+..|. +-..
T Consensus 345 ~~v~~~~~s~~g~~l~-~~~~dg~v~~~~~~~~~~~~~~~~~-----------------~~v~~~~~s~dg~~l~-~~~~ 405 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIA-SASDDKTVKLWNRNGQLLQTLTGHS-----------------SSVRGVAFSPDGQTIA-SASD 405 (577)
T ss_dssp SCEEEEEECTTSSEEE-EEETTSEEEEEETTCCEEEEEECCS-----------------SCEEEEEECTTSSCEE-EEET
T ss_pred CCEEEEEECCCCCEEE-EEeCCCEEEEEcCCCCEEEEecCCC-----------------CCeEEEEECCCCCEEE-EEeC
Confidence 5678899997555554 4445788988888876655443211 2467788887665555 4444
Q ss_pred CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCC
Q psy13635 197 TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNE 276 (357)
Q Consensus 197 ~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~ 276 (357)
.+.|...+.+++....+.. .-....+++++|.+..|..+... +.|...+.++.....+. ..-....++++.+.+.
T Consensus 406 d~~v~~~~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d---~~v~~w~~~~~~~~~~~-~~~~~v~~~~~spd~~ 480 (577)
T 2ymu_A 406 DKTVKLWNRNGQLLQTLTG-HSSSVWGVAFSPDDQTIASASDD---KTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQ 480 (577)
T ss_dssp TSEEEEECTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETT---SEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSC
T ss_pred CCEEEEEeCCCCEEEEecC-CCCCeEEEEECCCCCEEEEEcCC---CEEEEEECCCCEEEEEc-CCCCCEEEEEEcCCCC
Confidence 5688888888876665543 33567889999986666665544 57887888776555543 3335568899986554
Q ss_pred EEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 277 KLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 277 ~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
.| .+-...+.|...+.+|...+.+. ........+++. ++.+..+-...+.|...+. +|+....+.........+.
T Consensus 481 ~l-as~~~d~~i~iw~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~ 556 (577)
T 2ymu_A 481 TI-ASASDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVA 556 (577)
T ss_dssp EE-EEEETTSEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEE
T ss_pred EE-EEEeCCCEEEEEcCCCCEEEEEe-CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEE
Confidence 44 44445678888888887665554 344556778876 3444455555678887886 7777776655444444444
No 131
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.95 E-value=1.9e-05 Score=74.89 Aligned_cols=246 Identities=10% Similarity=-0.040 Sum_probs=153.0
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcC--CCCcceeEEEEe--CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFD--GNNVGSKHNVIT--NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~--g~~~~~~~~~~~--~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
.+.++++++.+..|+.+...++.|...++. +.. ....+. ..-..+.++++++.++.|+.++. .+.|..+++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~ 179 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN---VLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDIN 179 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS---CEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc---eeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecC
Confidence 478999999888887877777888888877 443 123322 22356789999987777776664 6788888875
Q ss_pred CCceEE-EEecCCCCcceeeeeccCcccccCCceEEEeCC--CCeEEEEeCCCCeEEEEEcCCCc-eEEEecCCCCCceE
Q psy13635 148 GKKRKV-LYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV--ARNLYWTDTGTDRIEVCRLEGTH-RKVLVNTDLVEPRA 223 (357)
Q Consensus 148 g~~~~~-~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~--~~~lY~td~~~~~I~~~~~~g~~-~~~~~~~~~~~P~g 223 (357)
...... ... .+ ......+..+++.+. .+.++++....+.|...++.... ...+.......+..
T Consensus 180 ~~~~~~~~~~-~~------------~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 180 SIPEEKFTQE-PI------------LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSS 246 (450)
T ss_dssp SCCCSSCCCC-CS------------EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEE
T ss_pred Ccccccccce-ee------------ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEE
Confidence 432210 000 00 011135677888876 24455555556788888877443 33434334456789
Q ss_pred EEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-------------------------CCCCceEEEEecCCCEE
Q psy13635 224 ITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-------------------------RLGWPNGITLDVDNEKL 278 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-------------------------~l~~P~giaid~~~~~l 278 (357)
++++ ....|+.+... +.|...++........+.. .-....++++.+.+..|
T Consensus 247 ~~~s-d~~~l~s~~~d---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 247 ICCG-KDYLLLSAGGD---DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEEC-STTEEEEEESS---SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred EEEC-CCCEEEEEeCC---CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 9998 65566665543 5888888775544333321 11235688888778888
Q ss_pred EEEeCCCCeEEEEeC--CCC-C--eEEEecCCCCceEEEEEECCEEEEEeCCCC---------eEEEEeCccCce
Q psy13635 279 YWCDAKTDKIEMIDF--DGN-N--RRELINENLPHVFGISLLGDYVYWTDWQRR---------SIDRVNKITGND 339 (357)
Q Consensus 279 Y~~d~~~~~I~~~~~--dG~-~--~~~i~~~~~~~p~gia~~~~~ly~td~~~~---------~I~~~~~~~g~~ 339 (357)
|++....+.|...+. ... . ....+... ..+.++++..+.++++-.... .|+.++..+|+.
T Consensus 323 ~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~ 396 (450)
T 2vdu_B 323 AFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSF 396 (450)
T ss_dssp EEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEE
T ss_pred EEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeE
Confidence 888767788888887 322 1 11122223 678899999887777754322 677777755543
No 132
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.94 E-value=2.5e-05 Score=70.87 Aligned_cols=285 Identities=6% Similarity=-0.082 Sum_probs=171.8
Q ss_pred cCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC
Q psy13635 37 HHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 37 ~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
-++...+|+.+. ...|+..|+.................++++++.+..|+.+ ..++.|...++.... ...... .
T Consensus 40 ~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~---~~~~~~-~ 114 (369)
T 3zwl_B 40 YNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTG-SADYSIKLWDVSNGQ---CVATWK-S 114 (369)
T ss_dssp ECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTTEEEEEETTTCC---EEEEEE-C
T ss_pred EcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCc---EEEEee-c
Confidence 344555666665 4568899987755444454566678899999866666544 456789999988664 122332 4
Q ss_pred cCCceeEEEEcCCCeEEEEeCC----CCEEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSE----TNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~----~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
-..+..+++++.+..++.+... .+.|...++..... ..+..........+. ..........+++++.+..|
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l 190 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII----THEGLDAATVAGWSTKGKYI 190 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE----CCTTCCCEEEEEECGGGCEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc----CCcCccceeEEEEcCCCCEE
Confidence 4568899999866666555432 27888877643321 111110000000000 01111256778888766666
Q ss_pred EEEeCCCCeEEEEEcCC-CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEE
Q psy13635 191 YWTDTGTDRIEVCRLEG-THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGI 269 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g-~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gi 269 (357)
+.+. ..+.|...++.. ...............+++++|....|+.+... +.|...++........+. .-.....+
T Consensus 191 ~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~-~~~~~~~~ 265 (369)
T 3zwl_B 191 IAGH-KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD---TNSFLVDVSTLQVLKKYE-TDCPLNTA 265 (369)
T ss_dssp EEEE-TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCEEEEEE-CSSCEEEE
T ss_pred EEEc-CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC---ceEEEEECCCCceeeeec-CCCCceeE
Confidence 5544 457899999886 33333333344567899999976666666544 588888887665554443 33456789
Q ss_pred EEecCCCEEEEEeCCCC-------------eEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCc
Q psy13635 270 TLDVDNEKLYWCDAKTD-------------KIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~-------------~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~ 335 (357)
++++.+..++.+....+ .+...+.........+.........+++. ++.++++-...+.|...+..
T Consensus 266 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 266 VITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp EECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred EecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 99887777777765433 56677765544444444445566778886 35555555556777766653
No 133
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.93 E-value=8e-07 Score=82.21 Aligned_cols=278 Identities=9% Similarity=-0.018 Sum_probs=161.0
Q ss_pred ecCCCCeEEEEEeC-Cc---EEEEEcCCCCcceEeccCCCcE-EEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 36 SHHVAAQMLLFATS-KD---IRIANLSRPLKPVTIIKDLEEG-AAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 36 ~~~~~~~~l~~~~~-~~---i~~~~~~~~~~~~~~~~~~~~~-~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
+-++....|++... .. |+.+|++++ ....+....... .++.+++++..|+++... ..|+..++++.. ...
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g-~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~g~---~~~ 116 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQ-VATQLTEGRGDNTFGGFLSPDDDALFYVKDG-RNLMRVDLATLE---ENV 116 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTC-EEEECCCSSCBCSSSCEECTTSSEEEEEETT-TEEEEEETTTCC---EEE
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCC-ceEEeeeCCCCCccceEEcCCCCEEEEEeCC-CeEEEEECCCCc---cee
Confidence 34555566777664 33 999999773 344443333322 256799988999998753 589999998874 222
Q ss_pred EEeCCcCCc--eeEEEEcCCCeEEEE---------------------eCCCCEEEEEEcCCCceEEEEecCCCCcceeee
Q psy13635 111 VITNGLITP--DGLAIDWLTEKLYWT---------------------DSETNKLEVSSLDGKKRKVLYWEDIDQPRAIAS 167 (357)
Q Consensus 111 ~~~~~~~~p--~glavd~~~~~ly~t---------------------d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~ 167 (357)
+....-... ...++++.+..+... ......|.++++.+...+.+....
T Consensus 117 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--------- 187 (388)
T 3pe7_A 117 VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN--------- 187 (388)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES---------
T ss_pred eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC---------
Confidence 222211111 112335444444322 123367888888766555554221
Q ss_pred eccCcccccCCceEEEeC-CCCeEEEEeCC-----CCeEEEEEcCCCceEEEecCCC-CCceEEEEeCCCCEEEEE-eCC
Q psy13635 168 YKLPTIEVEHPDGVAVDW-VARNLYWTDTG-----TDRIEVCRLEGTHRKVLVNTDL-VEPRAITLSPAHGYLFWS-DWN 239 (357)
Q Consensus 168 ~~~~~~~~~~p~glavD~-~~~~lY~td~~-----~~~I~~~~~~g~~~~~~~~~~~-~~P~giavd~~~g~Ly~~-d~~ 239 (357)
.....+++.| .++.|.++... ..+|+.++.+|...+.+..... ......+++|.+..|+++ +..
T Consensus 188 --------~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 188 --------QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLK 259 (388)
T ss_dssp --------SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred --------ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCC
Confidence 1345677887 66677665543 3489999998877666544221 134567899887767554 433
Q ss_pred CC-CCeEEEEecCCCceEEEeeCCC-----CCceEEEEecCCCEEEEEe--------CCCCeEEEEeCCCCCeEEEecCC
Q psy13635 240 EK-RPKIERSLLNGGERVLLVKDRL-----GWPNGITLDVDNEKLYWCD--------AKTDKIEMIDFDGNNRRELINEN 305 (357)
Q Consensus 240 ~~-~~~I~~~~~dg~~~~~~~~~~l-----~~P~giaid~~~~~lY~~d--------~~~~~I~~~~~dG~~~~~i~~~~ 305 (357)
.. ...|+..++++...+.+..... ..|.++++.+++..|+++- .+...|+.+++++...+.+....
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 339 (388)
T 3pe7_A 260 GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHD 339 (388)
T ss_dssp TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECC
T ss_pred CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEecccc
Confidence 22 1139999998877655533211 1144456666677777653 45668999999887665554422
Q ss_pred CC----------ceEEEEE--ECCEEEEEeCCC--CeEEEEeCc
Q psy13635 306 LP----------HVFGISL--LGDYVYWTDWQR--RSIDRVNKI 335 (357)
Q Consensus 306 ~~----------~p~gia~--~~~~ly~td~~~--~~I~~~~~~ 335 (357)
.. ....+++ ++..|+++.... ..|++++..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 340 TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 20 2334455 356788876543 457777763
No 134
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.92 E-value=2.5e-05 Score=70.06 Aligned_cols=273 Identities=8% Similarity=-0.016 Sum_probs=169.0
Q ss_pred EeecCCCCeEEEEEeCCcEEEEEcCCCCc---ceEec--cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCccee
Q psy13635 34 ALSHHVAAQMLLFATSKDIRIANLSRPLK---PVTII--KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSK 108 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~---~~~~~--~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 108 (357)
++.-++...+++.+....|+..++..... ..... ........+++++.++.|+.+ ..++.|...+++.... ..
T Consensus 56 ~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~-~~ 133 (337)
T 1gxr_A 56 AVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG-GEASTLSIWDLAAPTP-RI 133 (337)
T ss_dssp EEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEE-ESSSEEEEEECCCC---EE
T ss_pred EEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEE-cCCCcEEEEECCCCCc-ce
Confidence 33445566778777777788999876321 12111 345678899999876666655 4457888888876631 11
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
.............+++.+.++.|+ +-...+.|...++........... .-..+..+++++.+.
T Consensus 134 ~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~v~~~d~~~~~~~~~~~~----------------~~~~i~~~~~~~~~~ 196 (337)
T 1gxr_A 134 KAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVRQFQG----------------HTDGASCIDISNDGT 196 (337)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECC----------------CSSCEEEEEECTTSS
T ss_pred eeecccCCCceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCceeeeeec----------------ccCceEEEEECCCCC
Confidence 233334445578899987555555 444567899999876543333211 112467788887655
Q ss_pred eEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceE
Q psy13635 189 NLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNG 268 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~g 268 (357)
.|+. ....+.|...++.......... ....+..++++|.+..|+.+... +.|...++.......+. .....+.+
T Consensus 197 ~l~~-~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~---~~i~~~~~~~~~~~~~~-~~~~~v~~ 270 (337)
T 1gxr_A 197 KLWT-GGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMES---SNVEVLHVNKPDKYQLH-LHESCVLS 270 (337)
T ss_dssp EEEE-EETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETT---SCEEEEETTSSCEEEEC-CCSSCEEE
T ss_pred EEEE-EecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCC---CcEEEEECCCCCeEEEc-CCccceeE
Confidence 5554 4456789999987654433332 33567899999987777776654 58888888876654442 33456789
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEe
Q psy13635 269 ITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 269 iaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~ 333 (357)
+++.+.+..|+ +-...+.|...+.......... .....+..+++. ++..+++-...+.|...+
T Consensus 271 ~~~~~~~~~l~-~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 271 LKFAYCGKWFV-STGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEECTTSSEEE-EEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EEECCCCCEEE-EecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 99986555554 4445788999998665443222 234456777776 333334333456665443
No 135
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.92 E-value=2.2e-07 Score=88.95 Aligned_cols=217 Identities=12% Similarity=0.063 Sum_probs=135.4
Q ss_pred EEEEeCCcCCceeEEEEcCCC-eEEEEeCCCCEEEEEEcCCCce-EEEEe--cCCCCcceeeeeccCcccccCCceEEEe
Q psy13635 109 HNVITNGLITPDGLAIDWLTE-KLYWTDSETNKLEVSSLDGKKR-KVLYW--EDIDQPRAIASYKLPTIEVEHPDGVAVD 184 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~-~ly~td~~~~~I~~~~~~g~~~-~~~~~--~~~~~p~~i~~~~~~~~~~~~p~glavD 184 (357)
.+++..++..|.+|++.+.+. +||+++. .++|.+++.+|... ..+.. ..... ++ .......+.|||++
T Consensus 6 v~~va~gL~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~~~~~~~~~~~~~~--g~-----~~~~e~Gllgia~~ 77 (463)
T 2wg3_C 6 IQEVVSGLRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIFKEPYLDIHKLVQS--GI-----KGGDERGLLSLAFH 77 (463)
T ss_dssp EEEEEEEESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBCSSCSEECTTTBCC--CC-----SSSCCCSEEEEEEC
T ss_pred EEEeccCCCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCeeeeeecCCcceecc--Cc-----cccCCCcceeeEeC
Confidence 567778899999999998653 6999997 57999998776531 11111 00000 00 00113467899999
Q ss_pred CC---CCeEEEEeCC--C----------CeEEEEEcCCC--------ceEEEec----CCCCCceEEEEeCCCCEEEEEe
Q psy13635 185 WV---ARNLYWTDTG--T----------DRIEVCRLEGT--------HRKVLVN----TDLVEPRAITLSPAHGYLFWSD 237 (357)
Q Consensus 185 ~~---~~~lY~td~~--~----------~~I~~~~~~g~--------~~~~~~~----~~~~~P~giavd~~~g~Ly~~d 237 (357)
+. ++.||++... . .+|.++.++.. ..++++. ........|+++|+ |+||++.
T Consensus 78 P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpD-G~LYv~~ 156 (463)
T 2wg3_C 78 PNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPD-GFLYIIL 156 (463)
T ss_dssp TTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTT-SCEEEEE
T ss_pred CCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCC-CcEEEEe
Confidence 75 6899987542 1 37888876521 1233332 22345678999985 8999995
Q ss_pred CCCC---------------CCeEEEEecCCCc-------------------eEEEeeCCCCCceEEEEecCCC------E
Q psy13635 238 WNEK---------------RPKIERSLLNGGE-------------------RVLLVKDRLGWPNGITLDVDNE------K 277 (357)
Q Consensus 238 ~~~~---------------~~~I~~~~~dg~~-------------------~~~~~~~~l~~P~giaid~~~~------~ 277 (357)
-... .++|.|++.||.. +.+++..++.+|.|+++|+..+ .
T Consensus 157 Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~ 236 (463)
T 2wg3_C 157 GDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLT 236 (463)
T ss_dssp CCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEE
T ss_pred CCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceE
Confidence 3211 4789999999941 3467778999999999997643 7
Q ss_pred EEEEeC-CC----CeEEEEeCCCCC---eEEEecCC--CCceEEEEEEC--------CEEEEEeCCCCeEEEEeCc
Q psy13635 278 LYWCDA-KT----DKIEMIDFDGNN---RRELINEN--LPHVFGISLLG--------DYVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 278 lY~~d~-~~----~~I~~~~~dG~~---~~~i~~~~--~~~p~gia~~~--------~~ly~td~~~~~I~~~~~~ 335 (357)
+|.+|. +. ..|..+...+.. ........ ...|.|+++.. +.++++++. ++|+++...
T Consensus 237 ~~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~ 311 (463)
T 2wg3_C 237 ILCSDSNGKNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQS 311 (463)
T ss_dssp EEEECC------CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-
T ss_pred EEecccCCCCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeC
Confidence 788885 22 345555322210 11111111 14688999864 348999987 789888753
No 136
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.91 E-value=2.8e-05 Score=75.77 Aligned_cols=285 Identities=11% Similarity=0.100 Sum_probs=178.4
Q ss_pred ecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC
Q psy13635 36 SHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN 114 (357)
Q Consensus 36 ~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 114 (357)
+-++....++.+. ...|+..+.++ ............+.++++.+.+..|. +-..++.|+..+.++.. ...+..
T Consensus 228 ~~s~dg~~l~~~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~v~~~~d~~~l~-~~~~d~~i~~w~~~~~~----~~~~~~ 301 (577)
T 2ymu_A 228 AFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVNGVAFRPDGQTIA-SASDDKTVKLWNRNGQL----LQTLTG 301 (577)
T ss_dssp EECTTSSCEEEEETTSCEEEECTTS-CEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTSCE----EEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCC-CEEEEEecCCCCEEEEEEcCCCCEEE-EEeCCCEEEEEeCCCcE----EEEEec
Confidence 3344444454444 45577777755 33344444556788999998666555 44455678877877653 344444
Q ss_pred CcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 115 GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 115 ~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
....+.++++.+.+. ...+-...+.|...+.++.....+.. .-..+.++++.+.+..|. +-
T Consensus 302 h~~~v~~~~~~~~~~-~l~t~~~d~~i~~w~~~~~~~~~~~~-----------------~~~~v~~~~~s~~g~~l~-~~ 362 (577)
T 2ymu_A 302 HSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNGQHLQTLTG-----------------HSSSVWGVAFSPDGQTIA-SA 362 (577)
T ss_dssp CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSCEEEEECC-----------------CSSCEEEEEECTTSSEEE-EE
T ss_pred CCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCCCeeEEEeC-----------------CCCCEEEEEECCCCCEEE-EE
Confidence 445678899997544 45555567889888988776554421 112456788887665554 44
Q ss_pred CCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecC
Q psy13635 195 TGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVD 274 (357)
Q Consensus 195 ~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~ 274 (357)
...+.|...+.++.....+.. ....+.+++++|....|..+... +.|...+.++.....+. ..-....++++.+.
T Consensus 363 ~~dg~v~~~~~~~~~~~~~~~-~~~~v~~~~~s~dg~~l~~~~~d---~~v~~~~~~~~~~~~~~-~~~~~v~~~~~s~d 437 (577)
T 2ymu_A 363 SDDKTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIASASDD---KTVKLWNRNGQLLQTLT-GHSSSVWGVAFSPD 437 (577)
T ss_dssp ETTSEEEEEETTCCEEEEEEC-CSSCEEEEEECTTSSCEEEEETT---SEEEEECTTCCEEEEEE-CCSSCEEEEEECTT
T ss_pred eCCCEEEEEcCCCCEEEEecC-CCCCeEEEEECCCCCEEEEEeCC---CEEEEEeCCCCEEEEec-CCCCCeEEEEECCC
Confidence 445788888888876665543 34567899999876666555544 57777787776555443 33345678999866
Q ss_pred CCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceee
Q psy13635 275 NEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTR 353 (357)
Q Consensus 275 ~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i 353 (357)
+..|..+ ...+.|...+.++.....+. ........+++. ++.+..+-...+.|...+. +|+....+...-.....+
T Consensus 438 ~~~l~~~-~~d~~v~~w~~~~~~~~~~~-~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l 514 (577)
T 2ymu_A 438 DQTIASA-SDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGV 514 (577)
T ss_dssp SSEEEEE-ETTSEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEE
T ss_pred CCEEEEE-cCCCEEEEEECCCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEE
Confidence 5555544 45678888888886655443 344456777776 3555555556677777776 677666665444444443
No 137
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.90 E-value=1.8e-06 Score=86.15 Aligned_cols=238 Identities=12% Similarity=0.075 Sum_probs=147.5
Q ss_pred ccCCE-EEEEeCCCCeEEEEEcC--C-CCcceeEEEEeC-----CcCCceeEEEEcCCCeEEEEeCC---------CCEE
Q psy13635 80 YKKSM-VCWTDHGTEMISCCTFD--G-NNVGSKHNVITN-----GLITPDGLAIDWLTEKLYWTDSE---------TNKL 141 (357)
Q Consensus 80 ~~~~~-ly~~d~~~~~I~~~~~~--g-~~~~~~~~~~~~-----~~~~p~glavd~~~~~ly~td~~---------~~~I 141 (357)
|+++. |+++......|+.++++ | .. ...+.. ....+.++++.+.++.|+++... ..+|
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~----~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i 163 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAV----PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFL 163 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCC----CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCC----CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEE
Confidence 77788 88888777889999998 4 43 222322 23456789999988889887643 2578
Q ss_pred EEEEcCC------CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC-------CeEEEEEcCC-
Q psy13635 142 EVSSLDG------KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT-------DRIEVCRLEG- 207 (357)
Q Consensus 142 ~~~~~~g------~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~-------~~I~~~~~~g- 207 (357)
+++++++ ...+.+...+ -....++++.+.++.|+++.... ..|+..++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~~~~----------------~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~ 227 (662)
T 3azo_A 164 AAVPLDGSAAADRSAVRELSDDA----------------HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTED 227 (662)
T ss_dssp EEEETTSTTTTCGGGSEESSCSC----------------SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTT
T ss_pred EEEECCCCccccCCceeEEEecC----------------CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCC
Confidence 8899887 5444332010 11345567888888898876432 4799999884
Q ss_pred C---ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC--CCC------ceEEEEecCCC
Q psy13635 208 T---HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR--LGW------PNGITLDVDNE 276 (357)
Q Consensus 208 ~---~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~--l~~------P~giaid~~~~ 276 (357)
. ....+.......+..++++|.+. +|++.......+|++.+.++...+.+.... ... ...+++.+ ++
T Consensus 228 g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~-~~ 305 (662)
T 3azo_A 228 GRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA-NG 305 (662)
T ss_dssp SCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT-TS
T ss_pred CcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeC-CC
Confidence 3 34444433235678899998755 666554322248999998766555554321 111 24566653 45
Q ss_pred EEEEEe-CCCCeEEEEeCCCCCeEEEecCCCCceEEE-EEECCEEEEEeCCC---CeEEEEeCccCcee
Q psy13635 277 KLYWCD-AKTDKIEMIDFDGNNRRELINENLPHVFGI-SLLGDYVYWTDWQR---RSIDRVNKITGNDR 340 (357)
Q Consensus 277 ~lY~~d-~~~~~I~~~~~dG~~~~~i~~~~~~~p~gi-a~~~~~ly~td~~~---~~I~~~~~~~g~~~ 340 (357)
+++++. .+..+|+.++.++...+.+. .......++ +.+++.++++.... ..|+.++..+|+..
T Consensus 306 ~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 306 LIAVVHGKGAAVLGILDPESGELVDAA-GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp CEEEEEBSSSCEEEEEETTTTEEEECC-SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EEEEEEEcCccEEEEEECCCCcEEEec-CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 555543 34557888898876655443 233344566 77777766654332 36888887555543
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.89 E-value=1.2e-06 Score=88.51 Aligned_cols=280 Identities=12% Similarity=0.073 Sum_probs=169.1
Q ss_pred EEeecCCCCeEEEEEeCCcEEEEEcCCCC--cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 33 YALSHHVAAQMLLFATSKDIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
.+++-++...+|+++....|+.+|+.++. ....+......+..++++|++..|.++.. +.|+..++++.. ..
T Consensus 112 ~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~----~~ 185 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGR----QM 185 (741)
T ss_dssp CCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--TEEEEEETTTTE----EE
T ss_pred ceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--CcEEEEecCCCC----EE
Confidence 34555667778999888899999998742 34444444567889999999888887763 589999998763 22
Q ss_pred EEeCCcC-----------------CceeEEEEcCCCeEEEEeCCCC--------------------------------EE
Q psy13635 111 VITNGLI-----------------TPDGLAIDWLTEKLYWTDSETN--------------------------------KL 141 (357)
Q Consensus 111 ~~~~~~~-----------------~p~glavd~~~~~ly~td~~~~--------------------------------~I 141 (357)
.+...-. .+.++++.+.++.|+++....+ +|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 2222111 2578999998888988753321 55
Q ss_pred EEEEcCC-CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC--C--CCeEEEEEcCCCceEEEecC
Q psy13635 142 EVSSLDG-KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT--G--TDRIEVCRLEGTHRKVLVNT 216 (357)
Q Consensus 142 ~~~~~~g-~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~--~--~~~I~~~~~~g~~~~~~~~~ 216 (357)
..+++++ .....+... ...-..+..+++ +.+..|+++.. . ...|...++++.....+...
T Consensus 266 ~~~d~~~~~~~~~~~~~--------------~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~ 330 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLG--------------KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE 330 (741)
T ss_dssp EEECSSTTCCCEEECCC--------------SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE
T ss_pred EEEECCCCCceEEecCC--------------CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc
Confidence 6666655 433322110 001123467788 78888887653 2 24788889886655544432
Q ss_pred CCC----CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEE-EEecCCCEEEEEeCCC----Ce
Q psy13635 217 DLV----EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGI-TLDVDNEKLYWCDAKT----DK 287 (357)
Q Consensus 217 ~~~----~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gi-aid~~~~~lY~~d~~~----~~ 287 (357)
... ....++++|.+. ++++.......+|+..+.+|. ...+. ..-.....+ +++++++.||++.... .+
T Consensus 331 ~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~-~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~ 407 (741)
T 2ecf_A 331 TSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALT-HGNWSVDELLAVDEKAGLAYFRAGIESARESQ 407 (741)
T ss_dssp ECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESC-CSSSCEEEEEEEETTTTEEEEEECSSCTTCBE
T ss_pred CCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeee-ecceEEEeEeEEeCCCCEEEEEEeCCCCceEE
Confidence 211 235788998744 555544322358999998877 44332 332334455 5888888898876543 46
Q ss_pred EEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCCC---CeEEEEeCccCce
Q psy13635 288 IEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQR---RSIDRVNKITGND 339 (357)
Q Consensus 288 I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~---~~I~~~~~~~g~~ 339 (357)
|+.++.+|...+.+.. ......+++. +..+.++-... ..++..+. +++.
T Consensus 408 l~~~~~~g~~~~~l~~--~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~-~~~~ 461 (741)
T 2ecf_A 408 IYAVPLQGGQPQRLSK--APGMHSASFARNASVYVDSWSNNSTPPQIELFRA-NGEK 461 (741)
T ss_dssp EEEEETTCCCCEECCC--SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET-TSCE
T ss_pred EEEEEcCCCCeeeccc--CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc-CCCe
Confidence 8888888876554432 2333455554 34554432221 34555655 3443
No 139
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.89 E-value=1.5e-06 Score=80.53 Aligned_cols=241 Identities=12% Similarity=0.032 Sum_probs=159.7
Q ss_pred CCcEEEEEEEccCCEEEEEeCCC-----CeEEEEEcCCCCc----ceeE-EE-----EeCCcCCceeEEEEcCCCeEEEE
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGT-----EMISCCTFDGNNV----GSKH-NV-----ITNGLITPDGLAIDWLTEKLYWT 134 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~----~~~~-~~-----~~~~~~~p~glavd~~~~~ly~t 134 (357)
-.-|.|+++|..+++||++=..- -.+-.+..++... .... .- -..++.++.++.+|. .++|++.
T Consensus 25 n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~-~~rLWVL 103 (381)
T 3q6k_A 25 NMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDD-CRRLWVV 103 (381)
T ss_dssp GCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECT-TCEEEEE
T ss_pred ccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcC-CCcEEEE
Confidence 33578898864589999985542 2456666542100 0001 11 124688999999995 8899999
Q ss_pred eCCC---------------CEEEEEEcCCC--ce-EEEE-ecCCCCcceeeeeccCcccccCCceEEEe-C--C----CC
Q psy13635 135 DSET---------------NKLEVSSLDGK--KR-KVLY-WEDIDQPRAIASYKLPTIEVEHPDGVAVD-W--V----AR 188 (357)
Q Consensus 135 d~~~---------------~~I~~~~~~g~--~~-~~~~-~~~~~~p~~i~~~~~~~~~~~~p~glavD-~--~----~~ 188 (357)
|.+. -+|..+++... .. +++. +..... .-...++|+|| . . ++
T Consensus 104 DtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~------------~~S~l~di~VD~~~~~~~c~~~ 171 (381)
T 3q6k_A 104 DIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVE------------KPTYFGGFAVDVANPKGDCSET 171 (381)
T ss_dssp ECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCC------------CGGGEEEEEEEESCTTTTSCSE
T ss_pred eCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcc------------cCCccceEEEecccCCCCCCcc
Confidence 9762 16778887665 22 2222 122111 11246789999 2 1 57
Q ss_pred eEEEEeCCCCeEEEEEcCC-CceEEEec----C--------C-----CCCceEEEEeCC----CCEEEEEeCCCCCCeEE
Q psy13635 189 NLYWTDTGTDRIEVCRLEG-THRKVLVN----T--------D-----LVEPRAITLSPA----HGYLFWSDWNEKRPKIE 246 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g-~~~~~~~~----~--------~-----~~~P~giavd~~----~g~Ly~~d~~~~~~~I~ 246 (357)
..|++|.+...|.++++.. +..+++.. + + .....|||++|. .+.|||.--.+ .+++
T Consensus 172 ~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss--~~ly 249 (381)
T 3q6k_A 172 FVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA--IKVY 249 (381)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC--SEEE
T ss_pred EEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC--CcEE
Confidence 8999999988999999874 33343321 0 0 135679999987 78999999885 4899
Q ss_pred EEecC----C---CceEEEeeCC-CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC-----CCeEEEec-CCCCceEEE
Q psy13635 247 RSLLN----G---GERVLLVKDR-LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG-----NNRRELIN-ENLPHVFGI 312 (357)
Q Consensus 247 ~~~~d----g---~~~~~~~~~~-l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG-----~~~~~i~~-~~~~~p~gi 312 (357)
++..+ . ...+.+...+ .....++++|..+|.||+++...+.|.+.+.++ .+...+.. ..+..|.++
T Consensus 250 ~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~ 329 (381)
T 3q6k_A 250 SVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDI 329 (381)
T ss_dssp EEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEE
T ss_pred EEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeE
Confidence 88732 1 2223333332 244557888767899999999999999999988 34455544 357799999
Q ss_pred EEE-CCEEEEEeCC
Q psy13635 313 SLL-GDYVYWTDWQ 325 (357)
Q Consensus 313 a~~-~~~ly~td~~ 325 (357)
+++ +|+||++...
T Consensus 330 ~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 330 SVDSKGGLWFMSNG 343 (381)
T ss_dssp EECTTSCEEEEECS
T ss_pred EECCCCeEEEEECc
Confidence 997 6899998744
No 140
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.89 E-value=1.7e-05 Score=71.06 Aligned_cols=250 Identities=10% Similarity=-0.022 Sum_probs=158.4
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe--CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEE
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT--NGLITPDGLAIDWLTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--~~~~~p~glavd~~~~~ly~td~~~~~I~~~~ 145 (357)
.......++++++.+..|+.+. ++.|...+++..........+. ..-..+..+++.+.++.|+. -...+.|...+
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d 125 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIV-GGEASTLSIWD 125 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEE-EESSSEEEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcC--CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEE-EcCCCcEEEEE
Confidence 4455678899998777666655 7888888887653211122222 33355788999975555554 44578999999
Q ss_pred cCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEE
Q psy13635 146 LDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAIT 225 (357)
Q Consensus 146 ~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~gia 225 (357)
++.......... .........+++.+.+..|+.+. ..+.|...++...............+..++
T Consensus 126 ~~~~~~~~~~~~--------------~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~ 190 (337)
T 1gxr_A 126 LAAPTPRIKAEL--------------TSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCID 190 (337)
T ss_dssp CCCC--EEEEEE--------------ECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCCCCcceeeec--------------ccCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCceeeeeecccCceEEEE
Confidence 876543222110 01112456788887655555444 457899999876554444444456788999
Q ss_pred EeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCC
Q psy13635 226 LSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINEN 305 (357)
Q Consensus 226 vd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~ 305 (357)
++|....|+.+... +.|...++.......... .-..+..+++.+.+..|+.+. ..+.|...+.+......+ ...
T Consensus 191 ~~~~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~-~~~ 264 (337)
T 1gxr_A 191 ISNDGTKLWTGGLD---NTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQL-HLH 264 (337)
T ss_dssp ECTTSSEEEEEETT---SEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEE-CCC
T ss_pred ECCCCCEEEEEecC---CcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEE-cCC
Confidence 99876667666544 588888887665544433 234568899987666666554 467899999887665443 234
Q ss_pred CCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeE
Q psy13635 306 LPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 306 ~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
...+..+++. ++.++++-...+.|...+..+++...
T Consensus 265 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE
Confidence 4556778886 34455555566888888876666553
No 141
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.86 E-value=2.1e-05 Score=72.93 Aligned_cols=291 Identities=7% Similarity=-0.067 Sum_probs=167.9
Q ss_pred EeecCCCCe-EEEEEeC-CcEEEEEc----CCCC------cceEecc----------CCCcEEEEEEEccCCEEEEEeCC
Q psy13635 34 ALSHHVAAQ-MLLFATS-KDIRIANL----SRPL------KPVTIIK----------DLEEGAAIDYYYKKSMVCWTDHG 91 (357)
Q Consensus 34 ~~~~~~~~~-~l~~~~~-~~i~~~~~----~~~~------~~~~~~~----------~~~~~~~i~~d~~~~~ly~~d~~ 91 (357)
++.-++... +|+.+.. ..|+..++ ..+. ....... .......+++++.+..|+.+. .
T Consensus 50 ~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~ 128 (425)
T 1r5m_A 50 SSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV-E 128 (425)
T ss_dssp EEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE-T
T ss_pred EEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEe-C
Confidence 444455555 6666664 55888888 5533 1222222 233788999998666666554 4
Q ss_pred CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccC
Q psy13635 92 TEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLP 171 (357)
Q Consensus 92 ~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~ 171 (357)
++.|...+.++.. ...+......+..+++.+.++.|+.+. ..+.|...++...............+..+.... .
T Consensus 129 dg~i~i~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~ 202 (425)
T 1r5m_A 129 NGELRLWNKTGAL----LNVLNFHRAPIVSVKWNKDGTHIISMD-VENVTILWNVISGTVMQHFELKETGGSSINAEN-H 202 (425)
T ss_dssp TSCEEEEETTSCE----EEEECCCCSCEEEEEECTTSSEEEEEE-TTCCEEEEETTTTEEEEEECCC-------------
T ss_pred CCeEEEEeCCCCe----eeeccCCCccEEEEEECCCCCEEEEEe-cCCeEEEEECCCCcEEEEeeccccCccceeecc-c
Confidence 5677777765552 444444456688899997666565554 567888888865543332221110000000000 0
Q ss_pred cccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
.........+++.+ ++. +++....+.|...++..................++++|....|+.+... +.|...++.
T Consensus 203 ~~~~~~~~~~~~~~-~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~~i~i~d~~ 277 (425)
T 1r5m_A 203 SGDGSLGVDVEWVD-DDK-FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDD---GTLRIWHGG 277 (425)
T ss_dssp ---CCCBSCCEEEE-TTE-EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETT---SCEEEECSS
T ss_pred cCCcceeeEEEEcC-CCE-EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC
Confidence 00001155666664 344 4455556789998887654444443344567899999876666666544 578888876
Q ss_pred CCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEE
Q psy13635 252 GGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSID 330 (357)
Q Consensus 252 g~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~ 330 (357)
.......+...-.....+++.+. + ++++-...+.|...+................+..+++. .+.++++-...+.|.
T Consensus 278 ~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 355 (425)
T 1r5m_A 278 NGNSQNCFYGHSQSIVSASWVGD-D-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVN 355 (425)
T ss_dssp SBSCSEEECCCSSCEEEEEEETT-T-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCccceEecCCCccEEEEEECCC-C-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEE
Confidence 55444444334456688999854 4 55555567899999986554443443344566778876 344555555667888
Q ss_pred EEeCccCc
Q psy13635 331 RVNKITGN 338 (357)
Q Consensus 331 ~~~~~~g~ 338 (357)
..+..+++
T Consensus 356 i~~~~~~~ 363 (425)
T 1r5m_A 356 VYDLKKLN 363 (425)
T ss_dssp EEECHHHH
T ss_pred EEECCCCc
Confidence 88876665
No 142
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.85 E-value=5.7e-05 Score=70.38 Aligned_cols=279 Identities=9% Similarity=0.041 Sum_probs=172.3
Q ss_pred CeEEEEEeCCcEEEEEcCCCCcceEecc-CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc
Q psy13635 41 AQMLLFATSKDIRIANLSRPLKPVTIIK-DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP 119 (357)
Q Consensus 41 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p 119 (357)
..++..+....|+..++..+........ ......++++.+.+..|+.+. .++.|...++.... ....+...-...
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~-~dg~i~iwd~~~~~---~~~~~~~~~~~v 179 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL-GNGLVDIYDVESQT---KLRTMAGHQARV 179 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCC---EEEEECCCSSCE
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC-CCCeEEEEECcCCe---EEEEecCCCCce
Confidence 3456666677899999977443333332 355688999998666665554 46788888887653 233333334456
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD 198 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~ 198 (357)
..++++ . .++++....+.|...++..... ...... .-....++++.+.+ .++++....+
T Consensus 180 ~~~~~~--~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~-~~l~s~~~d~ 239 (401)
T 4aez_A 180 GCLSWN--R-HVLSSGSRSGAIHHHDVRIANHQIGTLQG----------------HSSEVCGLAWRSDG-LQLASGGNDN 239 (401)
T ss_dssp EEEEEE--T-TEEEEEETTSEEEEEETTSSSCEEEEEEC----------------CSSCEEEEEECTTS-SEEEEEETTS
T ss_pred EEEEEC--C-CEEEEEcCCCCEEEEecccCcceeeEEcC----------------CCCCeeEEEEcCCC-CEEEEEeCCC
Confidence 666665 3 4556666778999999873322 222211 11256778888744 4555555567
Q ss_pred eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEE
Q psy13635 199 RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKL 278 (357)
Q Consensus 199 ~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~l 278 (357)
.|...++..................++++|.+..++.+..+...+.|...++........+.. -.....+++.+.+..|
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-~~~v~~~~~s~~~~~l 318 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-GSQVTSLIWSPHSKEI 318 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-SSCEEEEEECSSSSEE
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-CCcEEEEEECCCCCeE
Confidence 899999886554444444455678999999777788776532236899999876655444432 3467899998777667
Q ss_pred EEEe-CCCCeEEEEeCCCCCeEEE--ecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEe
Q psy13635 279 YWCD-AKTDKIEMIDFDGNNRREL--INENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVII 344 (357)
Q Consensus 279 Y~~d-~~~~~I~~~~~dG~~~~~i--~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~ 344 (357)
+.+. ...+.|...+......... +.........+++. ++...++-...+.|...+..+++......
T Consensus 319 ~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 319 MSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred EEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 6654 3567888888765433222 22344456778886 35555566667888888877777655443
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.84 E-value=7.8e-06 Score=82.54 Aligned_cols=293 Identities=10% Similarity=0.062 Sum_probs=174.1
Q ss_pred EeecCCCCeEEEEEeC--C-----cEEEEEcCCCCcceEeccCC------------------------CcEEEEEEEccC
Q psy13635 34 ALSHHVAAQMLLFATS--K-----DIRIANLSRPLKPVTIIKDL------------------------EEGAAIDYYYKK 82 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~--~-----~i~~~~~~~~~~~~~~~~~~------------------------~~~~~i~~d~~~ 82 (357)
+++-++...+|+++.. . .|+.+|+.++....+..... .....+++++++
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg 120 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA 120 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC
Confidence 3444556667777764 3 68999998744333332211 124678999988
Q ss_pred CEEEEEeCCCCeEEEEEcCCC---CcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCC
Q psy13635 83 SMVCWTDHGTEMISCCTFDGN---NVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDI 159 (357)
Q Consensus 83 ~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~ 159 (357)
..|+++.. +.|+..++++. . ...+...-..+..+++.+.++.|+++.. +.|...++++.....+...+.
T Consensus 121 ~~l~~~~~--~~i~~~d~~~~~~~~----~~~l~~~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 121 QRLLFPLG--GELYLYDLKQEGKAA----VRQLTHGEGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp SEEEEEET--TEEEEEESSSCSTTS----CCBCCCSSSCEEEEEECTTSSEEEEEET--TEEEEEETTTTEEEECCCCCC
T ss_pred CEEEEEeC--CcEEEEECCCCCcce----EEEcccCCcccccccCCCCCCEEEEEeC--CcEEEEecCCCCEEEeccCCc
Confidence 88988876 78999999876 4 2223333355788999998888888763 589999988765544322110
Q ss_pred CCcceeee---eccCcccccCCceEEEeCCCCeEEEEeCCC--------------------------------CeEEEEE
Q psy13635 160 DQPRAIAS---YKLPTIEVEHPDGVAVDWVARNLYWTDTGT--------------------------------DRIEVCR 204 (357)
Q Consensus 160 ~~p~~i~~---~~~~~~~~~~p~glavD~~~~~lY~td~~~--------------------------------~~I~~~~ 204 (357)
. .+.. -.+..+.+..+.++++.+.+..|+++.... ..|...+
T Consensus 193 ~---~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 193 T---TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp S---SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred c---ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 0 0000 000001122357888988888888874322 1677777
Q ss_pred cCC-CceEEEecC--CCCCceEEEEeCCCCEEEEEeC--CCCCCeEEEEecCCCceEEEeeCCCC----CceEEEEecCC
Q psy13635 205 LEG-THRKVLVNT--DLVEPRAITLSPAHGYLFWSDW--NEKRPKIERSLLNGGERVLLVKDRLG----WPNGITLDVDN 275 (357)
Q Consensus 205 ~~g-~~~~~~~~~--~~~~P~giavd~~~g~Ly~~d~--~~~~~~I~~~~~dg~~~~~~~~~~l~----~P~giaid~~~ 275 (357)
.++ .....+... ....+..+++ |.+..|+++.. ......|+..+.++.....+...... ....+++.+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTS
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCC
Confidence 776 554444321 2234678889 88788887754 21135788899887666555432211 23467887655
Q ss_pred CEEEEEeCCC--CeEEEEeCCCCCeEEEecCCCCceEEE-EEE--CCEEEEEeCCC----CeEEEEeCccCceeEE
Q psy13635 276 EKLYWCDAKT--DKIEMIDFDGNNRRELINENLPHVFGI-SLL--GDYVYWTDWQR----RSIDRVNKITGNDREV 342 (357)
Q Consensus 276 ~~lY~~d~~~--~~I~~~~~dG~~~~~i~~~~~~~p~gi-a~~--~~~ly~td~~~----~~I~~~~~~~g~~~~~ 342 (357)
. ++++.... ..|+.++.+|. ...+. ..-.....+ ++. ++.||++.... ..|+.++. +|+..+.
T Consensus 349 ~-~~~~~~~~g~~~l~~~~~~~~-~~~l~-~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~-~g~~~~~ 420 (741)
T 2ecf_A 349 S-ILWSSERTGFQHLYRIDSKGK-AAALT-HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL-QGGQPQR 420 (741)
T ss_dssp C-EEEEECTTSSCEEEEECSSSC-EEESC-CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET-TCCCCEE
T ss_pred e-EEEEecCCCccEEEEEcCCCC-eeeee-ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc-CCCCeee
Confidence 4 65554443 47888888777 44333 222233444 354 46788776543 34777775 3543333
No 144
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.82 E-value=9.5e-07 Score=80.61 Aligned_cols=188 Identities=18% Similarity=0.184 Sum_probs=120.0
Q ss_pred EEEEEe--CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCC-------EEEEEeCC--CCeEEEEEcCCCCcceeEEE
Q psy13635 43 MLLFAT--SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKS-------MVCWTDHG--TEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 43 ~l~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~-------~ly~~d~~--~~~I~~~~~~g~~~~~~~~~ 111 (357)
.+++++ ...+..+|++| ..... ++. ..+.++++-+.-. .+|.++.. .++|..+.++... .....
T Consensus 41 s~ii~t~k~~gL~Vydl~G-~~l~~-~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~--~~l~~ 115 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDG-KMLHS-YNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN--GTLQS 115 (355)
T ss_dssp CEEEEEETTTEEEEEETTS-CEEEE-ECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT--CCEEE
T ss_pred cEEEEEcCCCCEEEEcCCC-cEEEE-ccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC--Cceee
Confidence 344544 34689999977 33333 333 6788888876221 46889988 8888777775332 11222
Q ss_pred E-------eCCcCCceeEEE--EcCCCe--EEEEeCCCCEEEEEEc----CCCceEEEEecCCCCcceeeeeccCccccc
Q psy13635 112 I-------TNGLITPDGLAI--DWLTEK--LYWTDSETNKLEVSSL----DGKKRKVLYWEDIDQPRAIASYKLPTIEVE 176 (357)
Q Consensus 112 ~-------~~~~~~p~glav--d~~~~~--ly~td~~~~~I~~~~~----~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~ 176 (357)
+ ..++..|.|+++ ++.++. +|+++.. +++..+.+ +|.....++.. +. -..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~-------f~-------lgs 180 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRA-------FK-------MNS 180 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEE-------EE-------CSS
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEE-------ec-------CCC
Confidence 2 245588999999 876674 7777765 77777554 23222222211 00 013
Q ss_pred CCceEEEeCCCCeEEEEeCCCCeEEEEEcC--CCc-eEEEe---cCCCC-CceEEEEeCCC---CEEEEEeCCCCCCeEE
Q psy13635 177 HPDGVAVDWVARNLYWTDTGTDRIEVCRLE--GTH-RKVLV---NTDLV-EPRAITLSPAH---GYLFWSDWNEKRPKIE 246 (357)
Q Consensus 177 ~p~glavD~~~~~lY~td~~~~~I~~~~~~--g~~-~~~~~---~~~~~-~P~giavd~~~---g~Ly~~d~~~~~~~I~ 246 (357)
.|.|+++|+..+.||++++..+ |++++.+ +.. .+.+. ...+. .|.||++.+.. |+|+.++.+. ....
T Consensus 181 q~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~--~s~~ 257 (355)
T 3amr_A 181 QTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN--SSYA 257 (355)
T ss_dssp CEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG--TEEE
T ss_pred CcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC--CEEE
Confidence 7999999999999999999854 9999955 321 22221 12343 79999997543 6899999885 4777
Q ss_pred EEecCCC
Q psy13635 247 RSLLNGG 253 (357)
Q Consensus 247 ~~~~dg~ 253 (357)
.++..+.
T Consensus 258 Vydr~~~ 264 (355)
T 3amr_A 258 IYDRQGK 264 (355)
T ss_dssp EEESSTT
T ss_pred EEECCCC
Confidence 7777543
No 145
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.82 E-value=3.1e-05 Score=75.77 Aligned_cols=286 Identities=9% Similarity=0.001 Sum_probs=173.0
Q ss_pred EeecCCCCeEEEEEeCCcEEEEEcCCC----CcceEeccCCCc-EEEEEEEc--cCCEEEEEeCCCCeEEEEEcCCC---
Q psy13635 34 ALSHHVAAQMLLFATSKDIRIANLSRP----LKPVTIIKDLEE-GAAIDYYY--KKSMVCWTDHGTEMISCCTFDGN--- 103 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~~~i~~~~~~~~----~~~~~~~~~~~~-~~~i~~d~--~~~~ly~~d~~~~~I~~~~~~g~--- 103 (357)
+++-++...+++++..+.|...++... ............ +.++++++ .+..|..+. .++.|...++...
T Consensus 23 ~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-~dg~v~vw~~~~~~~~ 101 (615)
T 1pgu_A 23 HLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-ESGKVIVWGWTFDKES 101 (615)
T ss_dssp CCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE-TTSEEEEEEEEEEGGG
T ss_pred EEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec-CCCEEEEEeCCCCccc
Confidence 344555667788888888999999864 344444455556 89999998 666665544 4677777777422
Q ss_pred ---CcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC---CEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccC
Q psy13635 104 ---NVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET---NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEH 177 (357)
Q Consensus 104 ---~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~---~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~ 177 (357)
. ......+...-.....+++.+.++.|+.+.... +.|...+ .+.....+ ...-..
T Consensus 102 ~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~-----------------~~~~~~ 162 (615)
T 1pgu_A 102 NSVE-VNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEV-----------------SGHSQR 162 (615)
T ss_dssp TEEE-EEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEEC-----------------CSCSSC
T ss_pred cccc-ccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceee-----------------ecCCcc
Confidence 1 011223333445678899998777777766442 4565555 22211111 111124
Q ss_pred CceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCC---CceEEEEeCC-CCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 178 PDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLV---EPRAITLSPA-HGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~---~P~giavd~~-~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
...+++.+.+..++++....+.|...+............... ....++++|. ...|+.+... +.|...++...
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~ 239 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD---RKISCFDGKSG 239 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT---CCEEEEETTTC
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC---CeEEEEECCCC
Confidence 667888877665666766678888888776544444433334 5789999987 5556655544 58888887655
Q ss_pred ceEEEe-e---CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC-eEEEecCC---CCceEEEEEE-CCEEEEEeC
Q psy13635 254 ERVLLV-K---DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN-RRELINEN---LPHVFGISLL-GDYVYWTDW 324 (357)
Q Consensus 254 ~~~~~~-~---~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~-~~~i~~~~---~~~p~gia~~-~~~ly~td~ 324 (357)
.....+ . ..-....++++. .+..| ++-...+.|...+..... ...+.... -..+..+.+. ++.+....
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~-~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 316 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWL-DSQKF-ATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS- 316 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEES-SSSEE-EEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE-
T ss_pred CEeEEecccccccCCceEEEEEc-CCCEE-EEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE-
Confidence 544444 3 333456788887 44444 444456789999886433 33332211 1234555553 45555544
Q ss_pred CCCeEEEEeCccCceeEEEec
Q psy13635 325 QRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 325 ~~~~I~~~~~~~g~~~~~i~~ 345 (357)
..+.|...+..+++....+..
T Consensus 317 ~~g~i~~~d~~~~~~~~~~~~ 337 (615)
T 1pgu_A 317 LDGTLNFYELGHDEVLKTISG 337 (615)
T ss_dssp TTSCEEEEETTEEEEEEEECC
T ss_pred CCCCEEEEECCCCcEEEEEeC
Confidence 567888888766665555543
No 146
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.82 E-value=1.1e-06 Score=81.19 Aligned_cols=282 Identities=10% Similarity=0.019 Sum_probs=154.8
Q ss_pred ecCCCCeEEEEEeCC----cEEEEEcCCCCcceEeccCCCcEE-EEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 36 SHHVAAQMLLFATSK----DIRIANLSRPLKPVTIIKDLEEGA-AIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 36 ~~~~~~~~l~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~-~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
+-++....|++.... .|+.+|++++ ....+........ ++.+++++..|+++... +.|+.+++++.. ...
T Consensus 42 ~~SpdG~~l~~~~~~~g~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~~---~~~ 116 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNRNYYLLNLETQ-QAVQLTEGKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLETLE---EQV 116 (396)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTT-EEEECCCSSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTTCC---EEE
T ss_pred cCCCCCCEEEEEEecCCCceEEEEECCCC-cEEEeecCCCCccccceECCCCCEEEEEEcC-CcEEEEECCCCC---cEE
Confidence 445556677777543 6888998773 3333333222222 25678888889777654 379999998764 122
Q ss_pred EEe-CCcCCcee--E----------------EEEcCCCeEEEEe----CCCCEEEEEEcCCCceEEEEecCCCCcceeee
Q psy13635 111 VIT-NGLITPDG--L----------------AIDWLTEKLYWTD----SETNKLEVSSLDGKKRKVLYWEDIDQPRAIAS 167 (357)
Q Consensus 111 ~~~-~~~~~p~g--l----------------avd~~~~~ly~td----~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~ 167 (357)
+.. ..-..|.| | ++.+.++.+++.. .....|.++++++.....+....
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~--------- 187 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT--------- 187 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEES---------
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCC---------
Confidence 222 11111221 1 1122233333332 34457888887765554443211
Q ss_pred eccCcccccCCceEEEeC-CCCeEEEEeCCC-----CeEEEEEcCCCceEEEecCC-CCCceEEEEeCCCCEEEEEeCCC
Q psy13635 168 YKLPTIEVEHPDGVAVDW-VARNLYWTDTGT-----DRIEVCRLEGTHRKVLVNTD-LVEPRAITLSPAHGYLFWSDWNE 240 (357)
Q Consensus 168 ~~~~~~~~~~p~glavD~-~~~~lY~td~~~-----~~I~~~~~~g~~~~~~~~~~-~~~P~giavd~~~g~Ly~~d~~~ 240 (357)
.....+++.+ .+++|+++.... .+|..++.++...+.+.... ...+..++++|.+.+|+++....
T Consensus 188 --------~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 188 --------AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp --------SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred --------cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCC
Confidence 1345567776 455566654332 47999999877655554321 22466789999877677764321
Q ss_pred CCCe--EEEEecCCCceEEEeeCCCCCceEEEEec-CCCEEEEEe---------------CCCCeEEEEeCCCCCeEEEe
Q psy13635 241 KRPK--IERSLLNGGERVLLVKDRLGWPNGITLDV-DNEKLYWCD---------------AKTDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 241 ~~~~--I~~~~~dg~~~~~~~~~~l~~P~giaid~-~~~~lY~~d---------------~~~~~I~~~~~dG~~~~~i~ 302 (357)
.... |+..++++.....+.... ... +++.+ ++..++.+. .+...|+.+++++...+.+.
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 260 GQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp TTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred CCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 1234 999999876655554322 112 66765 444444332 13468999998776555454
Q ss_pred cCCCC----------ceEEEEE--ECCEEEEEeCCC--CeEEEEeCccCceeEEE
Q psy13635 303 NENLP----------HVFGISL--LGDYVYWTDWQR--RSIDRVNKITGNDREVI 343 (357)
Q Consensus 303 ~~~~~----------~p~gia~--~~~~ly~td~~~--~~I~~~~~~~g~~~~~i 343 (357)
..... ....+++ ++..|+++.... ..|+.++.. +...+++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~-~~~~~~~ 390 (396)
T 3c5m_A 337 KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVP-ESYKHLE 390 (396)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC-TTCC---
T ss_pred CCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEc-ccccccc
Confidence 32210 1222344 456788876543 468888874 4444443
No 147
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.81 E-value=6.2e-06 Score=76.37 Aligned_cols=208 Identities=12% Similarity=0.073 Sum_probs=140.2
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCC---------------CeEEEEEcCCC--CcceeEE-EEeCCc----CCceeEEEE-
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGT---------------EMISCCTFDGN--NVGSKHN-VITNGL----ITPDGLAID- 125 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~---------------~~I~~~~~~g~--~~~~~~~-~~~~~~----~~p~glavd- 125 (357)
.+..+.++.+|. .++||+.|.+. -+|..+++... ... .. .+.... ..-..++||
T Consensus 85 ~lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li--~~y~~p~~~~~~~S~l~di~VD~ 161 (381)
T 3q6k_A 85 ELTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEV--VRYYFPTRLVEKPTYFGGFAVDV 161 (381)
T ss_dssp SSSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEE--EEEECCGGGCCCGGGEEEEEEEE
T ss_pred ceEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeE--EEEECCHHhcccCCccceEEEec
Confidence 477889999996 78999999762 15778888776 421 22 222221 335678999
Q ss_pred c------CCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcc--eeeeeccCccc---ccCCceEEEeCC----CCeE
Q psy13635 126 W------LTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPR--AIASYKLPTIE---VEHPDGVAVDWV----ARNL 190 (357)
Q Consensus 126 ~------~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~--~i~~~~~~~~~---~~~p~glavD~~----~~~l 190 (357)
- ..+.+|++|.....|.++++.......+.... ..|. +... +.... ..+..|||+++. ++.|
T Consensus 162 ~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-~~pd~~~~~~--i~G~~~~~~~Gi~gIaLsp~~~~~~~~L 238 (381)
T 3q6k_A 162 ANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-FKAERPTKFD--YGGKEYEFKAGIFGITLGDRDSEGNRPA 238 (381)
T ss_dssp SCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG-GSCCSCEEEE--ETTEEEEECCCEEEEEECCCCTTSCCEE
T ss_pred ccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC-CccccCcceE--ECCEEeEeccCceEEEecCCcCCCCeEE
Confidence 2 15789999999999999999766554444322 2222 1100 00111 136789999987 7899
Q ss_pred EEEeCCCCeEEEEEc---C-C---CceEEEecCC-CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC-----CceEE
Q psy13635 191 YWTDTGTDRIEVCRL---E-G---THRKVLVNTD-LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG-----GERVL 257 (357)
Q Consensus 191 Y~td~~~~~I~~~~~---~-g---~~~~~~~~~~-~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg-----~~~~~ 257 (357)
||.-....+++++.. . . ...+.+...+ .....++++|+.+|.||+++... ..|.+.+.++ .+...
T Consensus 239 Yf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~--~aI~~w~~~~~~~~~~n~~~ 316 (381)
T 3q6k_A 239 YYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANT--KQVSCWNTQKMPLRMKNTDV 316 (381)
T ss_dssp EEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSS--SEEEEEETTSCSBCGGGEEE
T ss_pred EEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccC--CeEEEEeCCCCccccCceEE
Confidence 999998888988872 1 1 2223333222 23445788987789999999985 4999999987 34445
Q ss_pred Eee-CCCCCceEEEEecCCCEEEEEeCCC
Q psy13635 258 LVK-DRLGWPNGITLDVDNEKLYWCDAKT 285 (357)
Q Consensus 258 ~~~-~~l~~P~giaid~~~~~lY~~d~~~ 285 (357)
+.. ..+.+|.++++| .++.||+.....
T Consensus 317 l~~d~~l~~pd~~~i~-~~g~Lwv~sn~l 344 (381)
T 3q6k_A 317 VYTSSRFVFGTDISVD-SKGGLWFMSNGF 344 (381)
T ss_dssp EEECTTCCSEEEEEEC-TTSCEEEEECSC
T ss_pred EEECCCccccCeEEEC-CCCeEEEEECcc
Confidence 443 468899999998 688999987543
No 148
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.80 E-value=1.7e-06 Score=78.90 Aligned_cols=195 Identities=15% Similarity=0.168 Sum_probs=120.3
Q ss_pred CEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCC-------eEEEEeCC--CCEEEEEEcCCCceEE
Q psy13635 83 SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE-------KLYWTDSE--TNKLEVSSLDGKKRKV 153 (357)
Q Consensus 83 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~-------~ly~td~~--~~~I~~~~~~g~~~~~ 153 (357)
..+.-++. .+.+..++++|.. ...+.. ..+.++.+-+.-. .+|.++.. .++|..+.+|....+.
T Consensus 41 s~ii~t~k-~~gL~Vydl~G~~----l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 41 SKLITTNK-KSGLVVYSLDGKM----LHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp CEEEEEET-TTEEEEEETTSCE----EEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred cEEEEEcC-CCCEEEEcCCCcE----EEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 44333444 3567777777763 222221 4566666543111 46899988 8999999876433221
Q ss_pred EEecCCCCcceeeeeccCcccccCCceEEE--eCCCCe--EEEEeCCCCeEEEEEc----CCCceEEEec--CCCCCceE
Q psy13635 154 LYWEDIDQPRAIASYKLPTIEVEHPDGVAV--DWVARN--LYWTDTGTDRIEVCRL----EGTHRKVLVN--TDLVEPRA 223 (357)
Q Consensus 154 ~~~~~~~~p~~i~~~~~~~~~~~~p~glav--D~~~~~--lY~td~~~~~I~~~~~----~g~~~~~~~~--~~~~~P~g 223 (357)
-.......|- ...+..|.|+++ ++.++. +|+++.. +++.+..+ +|.....++. ..-..|.|
T Consensus 114 ~~i~~~~~pv--------~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~Eg 184 (355)
T 3amr_A 114 QSMTDPDHPI--------ATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNSQTEG 184 (355)
T ss_dssp EECSCTTSCE--------ECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSSCEEE
T ss_pred eeccccccCc--------CCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCCCcce
Confidence 1111100010 133468999999 887774 6777665 67776544 2322212211 12358999
Q ss_pred EEEeCCCCEEEEEeCCCCCCeEEEEecC--CCc-eEEEee---CCCC-CceEEEEecCC---CEEEEEeCCCCeEEEEeC
Q psy13635 224 ITLSPAHGYLFWSDWNEKRPKIERSLLN--GGE-RVLLVK---DRLG-WPNGITLDVDN---EKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~~~~~I~~~~~d--g~~-~~~~~~---~~l~-~P~giaid~~~---~~lY~~d~~~~~I~~~~~ 293 (357)
+++|+..|+||++++. ..|++++.+ +.. .+.+.. ..+. .|.||++.+.. ++|++++.+++....++.
T Consensus 185 cvvDd~~g~Lyv~eEd---~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 185 MAADDEYGRLYIAEED---EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEETTTTEEEEEETT---TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred EEEcCCCCeEEEeccc---ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 9999999999999998 369999965 322 233321 2333 79999996433 589999999999999998
Q ss_pred CCC
Q psy13635 294 DGN 296 (357)
Q Consensus 294 dG~ 296 (357)
.+.
T Consensus 262 ~~~ 264 (355)
T 3amr_A 262 QGK 264 (355)
T ss_dssp STT
T ss_pred CCC
Confidence 754
No 149
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.79 E-value=6.5e-05 Score=76.35 Aligned_cols=258 Identities=9% Similarity=0.013 Sum_probs=165.6
Q ss_pred EEeecCCCCeEEEEEeC-CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 33 YALSHHVAAQMLLFATS-KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
.|++-++..++++.+.. ..|...|+..+..............++++++.+..|..+.. ++.|...+++... ....
T Consensus 17 ~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vw~~~~~~---~~~~ 92 (814)
T 3mkq_A 17 KGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-DFRIRVFNYNTGE---KVVD 92 (814)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-TSEEEEEETTTCC---EEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-CCeEEEEECCCCc---EEEE
Confidence 34455667777877774 46888998764444444455667899999998777776654 6788888887664 2334
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC-ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK-KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~-~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
+......+..+++.+.+..|+. -...+.|...+++.. ......... -.....+++.+.++.+
T Consensus 93 ~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~~~~----------------~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 93 FEAHPDYIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWALEQTFEGH----------------EHFVMCVAFNPKDPST 155 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEE-EETTSEEEEEEGGGTSEEEEEEECC----------------SSCEEEEEEETTEEEE
T ss_pred EecCCCCEEEEEEeCCCCEEEE-EcCCCEEEEEECCCCceEEEEEcCC----------------CCcEEEEEEEcCCCCE
Confidence 4444566888999986666654 445788999998765 222222111 1245678888756666
Q ss_pred EEEeCCCCeEEEEEcCCCce-EEEecCCCCCceEEEEeC--CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCce
Q psy13635 191 YWTDTGTDRIEVCRLEGTHR-KVLVNTDLVEPRAITLSP--AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~-~~~~~~~~~~P~giavd~--~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
+++....+.|...++.+... ..+..........+++.| ....|+.+... +.|...+.........+........
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~~v~ 232 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD---LTIKIWDYQTKSCVATLEGHMSNVS 232 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT---SEEEEEETTTTEEEEEEECCSSCEE
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC---CEEEEEECCCCcEEEEEcCCCCCEE
Confidence 66766678899999865443 333332335678889987 54455555443 5888888876655555544555678
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL 315 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~ 315 (357)
.+++.+.+..|+ +-...+.|...+................+..+++.
T Consensus 233 ~~~~~~~~~~l~-~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~ 279 (814)
T 3mkq_A 233 FAVFHPTLPIII-SGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATH 279 (814)
T ss_dssp EEEECSSSSEEE-EEETTSCEEEEETTTCSEEEEECCSSSSEEEEEEC
T ss_pred EEEEcCCCCEEE-EEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEc
Confidence 899986555444 44456788888887544433443344455666655
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.78 E-value=1.7e-06 Score=76.07 Aligned_cols=228 Identities=12% Similarity=0.109 Sum_probs=147.2
Q ss_pred EEEeecCCCCeEEEEEeCCcEEEEEcCC-CCcceEeccC--CCcEEEEEEEccCCEEEEEeCC---CCeEEEEEcCCCCc
Q psy13635 32 WYALSHHVAAQMLLFATSKDIRIANLSR-PLKPVTIIKD--LEEGAAIDYYYKKSMVCWTDHG---TEMISCCTFDGNNV 105 (357)
Q Consensus 32 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~--~~~~~~i~~d~~~~~ly~~d~~---~~~I~~~~~~g~~~ 105 (357)
..++.-++...+++++....|+.+|+.+ ... ..+... ...+..+++++.+..|+++... ...|+.++.++..
T Consensus 44 v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~- 121 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSP-EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT- 121 (297)
T ss_dssp CEEEEECTTSSEEEEEETTEEEEEESSSCCSC-EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-
T ss_pred eEeeEECCCCCEEEEEcCCeEEEEeCCCCCCc-eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-
Confidence 3455666677788888888899999977 433 333322 2456678999988889888743 4689999887764
Q ss_pred ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCC--EEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEE
Q psy13635 106 GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETN--KLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAV 183 (357)
Q Consensus 106 ~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~--~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glav 183 (357)
...+... ..+..+++.+.++.|+++....+ +|..++.++.....+.. ....+..+++
T Consensus 122 ---~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~~ 180 (297)
T 2ojh_A 122 ---PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH-----------------GEGRNDGPDY 180 (297)
T ss_dssp ---CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC-----------------SSSCEEEEEE
T ss_pred ---eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc-----------------CCCccccceE
Confidence 3333222 23677889888888887665555 55555566554433211 1124677888
Q ss_pred eCCCCeEEEEeC--CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC--------CCeEEEEecCCC
Q psy13635 184 DWVARNLYWTDT--GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK--------RPKIERSLLNGG 253 (357)
Q Consensus 184 D~~~~~lY~td~--~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~--------~~~I~~~~~dg~ 253 (357)
++.+..|+++.. +..+|+.++.++.....+.. .......++++|....|+++..... ...|+..++++.
T Consensus 181 s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 181 SPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred CCCCCEEEEEecCCCCccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 887878887754 33477777777766554432 2245667899998778877765311 146899998877
Q ss_pred ceEEEee--CCCCCceEEEEecCCCEEEEEeC
Q psy13635 254 ERVLLVK--DRLGWPNGITLDVDNEKLYWCDA 283 (357)
Q Consensus 254 ~~~~~~~--~~l~~P~giaid~~~~~lY~~d~ 283 (357)
....+.. ..-..+..+++.+.+..|+++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 260 NVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp SCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred CceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 6654442 22234556777777777776654
No 151
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.76 E-value=1.3e-05 Score=74.04 Aligned_cols=244 Identities=10% Similarity=-0.057 Sum_probs=142.0
Q ss_pred EEEEccCCEEEEEeCCCC--eEEEEEcCCCCcceeEEEEeCCcCCc-eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceE
Q psy13635 76 IDYYYKKSMVCWTDHGTE--MISCCTFDGNNVGSKHNVITNGLITP-DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK 152 (357)
Q Consensus 76 i~~d~~~~~ly~~d~~~~--~I~~~~~~g~~~~~~~~~~~~~~~~p-~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~ 152 (357)
.++.|++.+|+++...++ .|+.+++++.. ...+..+-..+ .++++.+.++.|+++.. ...|++.++++...+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~spdg~~l~~~~~-~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV----ATQLTEGRGDNTFGGFLSPDDDALFYVKD-GRNLMRVDLATLEEN 115 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCE----EEECCCSSCBCSSSCEECTTSSEEEEEET-TTEEEEEETTTCCEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCc----eEEeeeCCCCCccceEEcCCCCEEEEEeC-CCeEEEEECCCCcce
Confidence 568888888877765333 69999998874 33333333222 36789988889999885 368999999877665
Q ss_pred EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe---------------------CCCCeEEEEEcCCCceE
Q psy13635 153 VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD---------------------TGTDRIEVCRLEGTHRK 211 (357)
Q Consensus 153 ~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td---------------------~~~~~I~~~~~~g~~~~ 211 (357)
.+..... + .......++++.+..+.... .....|++.++.+...+
T Consensus 116 ~~~~~~~----~----------~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 116 VVYQVPA----E----------WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp EEEECCT----T----------EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred eeeechh----h----------cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 5542210 0 00001112343333333211 12247888888866655
Q ss_pred EEecCCCCCceEEEEeC-CCCEEEEEeCCCC---CCeEEEEecCCCceEEEeeCCC-CCceEEEEecCCCEEEE-EeCCC
Q psy13635 212 VLVNTDLVEPRAITLSP-AHGYLFWSDWNEK---RPKIERSLLNGGERVLLVKDRL-GWPNGITLDVDNEKLYW-CDAKT 285 (357)
Q Consensus 212 ~~~~~~~~~P~giavd~-~~g~Ly~~d~~~~---~~~I~~~~~dg~~~~~~~~~~l-~~P~giaid~~~~~lY~-~d~~~ 285 (357)
.+... ......++++| .+.+|.++..... ..+|+..+.+|.....+....- ......++.+++.+|++ ++...
T Consensus 182 ~l~~~-~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 260 (388)
T 3pe7_A 182 VILQE-NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG 260 (388)
T ss_dssp EEEEE-SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT
T ss_pred EeecC-CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC
Confidence 55432 34567899999 7667766665421 2589999999887766653321 12346788877777754 44322
Q ss_pred C---eEEEEeCCCCCeEEEecCCC-----CceE--EEEEECCEEEEEe--------CCCCeEEEEeCccCce
Q psy13635 286 D---KIEMIDFDGNNRRELINENL-----PHVF--GISLLGDYVYWTD--------WQRRSIDRVNKITGND 339 (357)
Q Consensus 286 ~---~I~~~~~dG~~~~~i~~~~~-----~~p~--gia~~~~~ly~td--------~~~~~I~~~~~~~g~~ 339 (357)
. .|+.+++++...+.+..... ..+. .++.++..|+++. .....|+.++..+|+.
T Consensus 261 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 261 SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred CCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 2 39999998766554432111 0021 2444555666542 3455788888754443
No 152
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.75 E-value=0.00013 Score=67.25 Aligned_cols=283 Identities=13% Similarity=0.055 Sum_probs=164.3
Q ss_pred eEEEEEe-CCcEEEEEcCCCC------cceEeccCCCcEEEEEEEcc---CC---EEEEEeCCCCeEEEEEcCCCCccee
Q psy13635 42 QMLLFAT-SKDIRIANLSRPL------KPVTIIKDLEEGAAIDYYYK---KS---MVCWTDHGTEMISCCTFDGNNVGSK 108 (357)
Q Consensus 42 ~~l~~~~-~~~i~~~~~~~~~------~~~~~~~~~~~~~~i~~d~~---~~---~ly~~d~~~~~I~~~~~~g~~~~~~ 108 (357)
.+++.+. ...|+..++.... ..............+++.+. ++ .++++-..++.|+..++++......
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 4455444 4578889987744 23344445566789999986 24 5555555567788877776531000
Q ss_pred --EEEEeCC-----cCCceeEEEE----cCCCeEEEEeCCCCEEEEEEcCC-------CceE-----EEEecCCCCccee
Q psy13635 109 --HNVITNG-----LITPDGLAID----WLTEKLYWTDSETNKLEVSSLDG-------KKRK-----VLYWEDIDQPRAI 165 (357)
Q Consensus 109 --~~~~~~~-----~~~p~glavd----~~~~~ly~td~~~~~I~~~~~~g-------~~~~-----~~~~~~~~~p~~i 165 (357)
...+... -..+..+++. +.++.++++-...+.|...++.. .... .+... ..
T Consensus 107 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~----- 180 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGT-VE----- 180 (397)
T ss_dssp EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEE-EC-----
T ss_pred ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeee-ec-----
Confidence 2222222 2567889998 76666144444567888877654 2222 22100 00
Q ss_pred eeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC---C---CCCceEEEEeCCCCEEEEEeCC
Q psy13635 166 ASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT---D---LVEPRAITLSPAHGYLFWSDWN 239 (357)
Q Consensus 166 ~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~---~---~~~P~giavd~~~g~Ly~~d~~ 239 (357)
.+...-..+..+++.+.+ ++++....+.|...++........... . ......++++|....|+.+...
T Consensus 181 ----~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 181 ----SPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp ----CSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred ----cccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecC
Confidence 000112357888998755 666666678899999875544333333 2 4568899999876666655442
Q ss_pred CCCCeEEEEecCCCceEEEeeC-------------CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec---
Q psy13635 240 EKRPKIERSLLNGGERVLLVKD-------------RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN--- 303 (357)
Q Consensus 240 ~~~~~I~~~~~dg~~~~~~~~~-------------~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~--- 303 (357)
...+.|...++........+.. .-.....+++.+.+..|+. -...+.|...+.........+.
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~ 333 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS-AGWDGKLRFWDVKTKERITTLNMHC 333 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE-EETTSEEEEEETTTTEEEEEEECCG
T ss_pred CCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEE-EeCCCeEEEEEcCCCceeEEEeccc
Confidence 1003788888765544433333 3345688999865555554 4467789999986544333333
Q ss_pred ---CC---------------CCceEEEEEECC-----------EEEEEeCCCCeEEEEeCccC
Q psy13635 304 ---EN---------------LPHVFGISLLGD-----------YVYWTDWQRRSIDRVNKITG 337 (357)
Q Consensus 304 ---~~---------------~~~p~gia~~~~-----------~ly~td~~~~~I~~~~~~~g 337 (357)
.. .....++++..+ .++++-...+.|...+..+|
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 334 DDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp GGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred CcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 22 345678888753 56666666788877776554
No 153
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.73 E-value=4.3e-06 Score=77.74 Aligned_cols=276 Identities=6% Similarity=0.031 Sum_probs=169.6
Q ss_pred CCcEEEEEcCCCCc--ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc-eeEEEEeCCcCCceeEEEE
Q psy13635 49 SKDIRIANLSRPLK--PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG-SKHNVITNGLITPDGLAID 125 (357)
Q Consensus 49 ~~~i~~~~~~~~~~--~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~~~~~~~~~p~glavd 125 (357)
...|+..++..... .............+++++.+..|..+ ..++.|...+++..... .....+...-.....+++.
T Consensus 44 d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 122 (416)
T 2pm9_A 44 DSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGA-LDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFN 122 (416)
T ss_dssp CCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEE-ESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEEC
T ss_pred CCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEE-ccCCeEEEeecccccccccchhhccCCccceEEEEEc
Confidence 34688899876431 22223445678899999866666544 44567888887762110 1233333344567889999
Q ss_pred cCCCeEEEEeCCCCEEEEEEcCCCc------eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCe
Q psy13635 126 WLTEKLYWTDSETNKLEVSSLDGKK------RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDR 199 (357)
Q Consensus 126 ~~~~~ly~td~~~~~I~~~~~~g~~------~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~ 199 (357)
+.++.++++-...+.|...++.... ........ ........++++.+.++.++++....+.
T Consensus 123 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 189 (416)
T 2pm9_A 123 AKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS-------------MSSVDEVISLAWNQSLAHVFASAGSSNF 189 (416)
T ss_dssp SSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS-------------CCSSCCCCEEEECSSCTTEEEEESSSSC
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc-------------cCCCCCeeEEEeCCCCCcEEEEEcCCCC
Confidence 8656677777778889988886553 11110000 1112356789998876777778777788
Q ss_pred EEEEEcCCCceEEEecCC------CCCceEEEEeCCCCEEEEE-eCCCCCCeEEEEecCCC-ceEEEee-CCCCCceEEE
Q psy13635 200 IEVCRLEGTHRKVLVNTD------LVEPRAITLSPAHGYLFWS-DWNEKRPKIERSLLNGG-ERVLLVK-DRLGWPNGIT 270 (357)
Q Consensus 200 I~~~~~~g~~~~~~~~~~------~~~P~giavd~~~g~Ly~~-d~~~~~~~I~~~~~dg~-~~~~~~~-~~l~~P~gia 270 (357)
|...++............ ......++++|.++.++++ ......+.|...++... .....+. ..-.....++
T Consensus 190 v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~ 269 (416)
T 2pm9_A 190 ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLD 269 (416)
T ss_dssp EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEE
T ss_pred EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEE
Confidence 999998865544433322 4568899999875444444 43311126777777653 2222222 2334568899
Q ss_pred EecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC-C-EEEEEeCCCCeEEEEeCccCc
Q psy13635 271 LDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLG-D-YVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 271 id~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~-~-~ly~td~~~~~I~~~~~~~g~ 338 (357)
+.+.++.++++-...+.|...+.........+.........+++.. + .++++-...+.|...+..+++
T Consensus 270 ~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 270 WCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp ECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred eCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 9864566666666678899999865444333333344556777764 3 677777777888877765444
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.72 E-value=3.1e-06 Score=83.18 Aligned_cols=260 Identities=11% Similarity=-0.014 Sum_probs=156.0
Q ss_pred CCCeEEEEEe--CCcEEEEEcCCCCcceEeccCC-CcEEEEEEEccCCEEEEEeC--CCC--eEEEEEc--CCCCcceeE
Q psy13635 39 VAAQMLLFAT--SKDIRIANLSRPLKPVTIIKDL-EEGAAIDYYYKKSMVCWTDH--GTE--MISCCTF--DGNNVGSKH 109 (357)
Q Consensus 39 ~~~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~~-~~~~~i~~d~~~~~ly~~d~--~~~--~I~~~~~--~g~~~~~~~ 109 (357)
++...|.+++ ...+...++++ .....+.... ....+++++++ ..+|+++. ..+ .|+.++. +|.. .
T Consensus 31 ~DG~~la~~s~~~g~~~lw~~~~-g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~----~ 104 (582)
T 3o4h_A 31 VDGDKLLVVGFSEGSVNAYLYDG-GETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE----Q 104 (582)
T ss_dssp ETTTEEEEEEEETTEEEEEEEET-TEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC----E
T ss_pred CCCCeEEEEEccCCceeEEEEcC-CCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc----c
Confidence 3444566654 33444455555 3333333333 45677888876 67788876 222 6888888 7764 3
Q ss_pred EEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 110 NVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 110 ~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
.+ .........++.+.++.++++....+.+...++++...+.+.... ...++++|.++.
T Consensus 105 -~l-~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-------------------~~~~~~spDG~~ 163 (582)
T 3o4h_A 105 -RL-EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-------------------GFGFVSDIRGDL 163 (582)
T ss_dssp -EC-TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-------------------SCEEEEEEETTE
T ss_pred -cc-cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-------------------CceEEECCCCCE
Confidence 22 222234455777667666665544445557787776655554221 167788888888
Q ss_pred EEEEeCC--C-CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCc
Q psy13635 190 LYWTDTG--T-DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWP 266 (357)
Q Consensus 190 lY~td~~--~-~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P 266 (357)
|+++... . ..|++.++++...+.+.. .......++++|++..|+.++.... ..|+..++++.... ++...-..+
T Consensus 164 la~~~~~~~~~~~i~~~d~~~g~~~~l~~-~~~~~~~~~~SpDG~~l~~~~~~~~-~~i~~~d~~~~~~~-~~~~~~~~~ 240 (582)
T 3o4h_A 164 IAGLGFFGGGRVSLFTSNLSSGGLRVFDS-GEGSFSSASISPGMKVTAGLETARE-ARLVTVDPRDGSVE-DLELPSKDF 240 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCCEEECC-SSCEEEEEEECTTSCEEEEEECSSC-EEEEEECTTTCCEE-ECCCSCSHH
T ss_pred EEEEEEcCCCCeEEEEEcCCCCCceEeec-CCCccccceECCCCCEEEEccCCCe-eEEEEEcCCCCcEE-EccCCCcCh
Confidence 8865432 1 469999988766666543 3345688999998778885555432 48999999987776 443322333
Q ss_pred eEEE--------EecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEEEeCCC---CeEEEEeC
Q psy13635 267 NGIT--------LDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYWTDWQR---RSIDRVNK 334 (357)
Q Consensus 267 ~gia--------id~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~td~~~---~~I~~~~~ 334 (357)
.+++ +++++ ++|++-...+.+..... |.... .......++++.++.++++-... ..++.++.
T Consensus 241 ~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~~~~----~~~~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 241 SSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-GERVE----APQGNHGRVVLWRGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp HHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-TEEEC----CCSSEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred hhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-CCeec----cCCCceEEEEecCCEEEEEEcCCCCCCeEEEEcC
Confidence 4444 87655 88887766777777777 53221 11234456666666665543222 45677765
No 155
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.70 E-value=0.00016 Score=65.35 Aligned_cols=263 Identities=11% Similarity=0.047 Sum_probs=161.8
Q ss_pred CCCcEEEEEEEcc---CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEE
Q psy13635 69 DLEEGAAIDYYYK---KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 69 ~~~~~~~i~~d~~---~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~ 145 (357)
......++++.+. ++.+..+-..++.|+..+.+.... .....+.........+++.+ .+.+..+....+.|...+
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-DLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEE
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-eeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEEEEE
Confidence 3456788888653 345667767777777777665421 01112333334567788886 455666777788999999
Q ss_pred cCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEE
Q psy13635 146 LDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAIT 225 (357)
Q Consensus 146 ~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~gia 225 (357)
+........+... -.....+++.+.+.. .++....+.|...+...................++
T Consensus 109 ~~~~~~~~~~~~~----------------~~~~~~~~~spdg~~-l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 109 LENGKQIKSIDAG----------------PVDAWTLAFSPDSQY-LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIA 171 (321)
T ss_dssp TTTTEEEEEEECC----------------TTCCCCEEECTTSSE-EEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEE
T ss_pred CCCCCEEEEEeCC----------------CccEEEEEECCCCCE-EEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEE
Confidence 8655433322211 123556788865554 44556667888888876554444444445678999
Q ss_pred EeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCC
Q psy13635 226 LSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINEN 305 (357)
Q Consensus 226 vd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~ 305 (357)
++|....|..+... +.|...++........+.........+++++. +.++++-...+.|...+.........+...
T Consensus 172 ~spdg~~lasg~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h 247 (321)
T 3ow8_A 172 YSPDGKYLASGAID---GIINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGH 247 (321)
T ss_dssp ECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCCCEEEECTT-SCEEEEECTTSCEEEEETTTCCEEEEECCC
T ss_pred ECCCCCEEEEEcCC---CeEEEEECCCCcEEEEEcccCCceeEEEEcCC-CCEEEEEcCCCeEEEEECCCcceeEEEcCC
Confidence 99976666665544 57888888765544444333345689999864 455555566788999998765554444444
Q ss_pred CCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 306 LPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 306 ~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
......+++. ++...++-...+.|...+..+++....+...-.....+.
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~ 297 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 297 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEE
Confidence 5556778876 345555555667888888767776666654444444443
No 156
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.69 E-value=0.00016 Score=67.72 Aligned_cols=273 Identities=10% Similarity=0.060 Sum_probs=163.3
Q ss_pred eecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe
Q psy13635 35 LSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 35 ~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
+.-++..++++-+. ...|+..|+..+..............+++|++.+. +..+-..++.|...++.+.. ....+.
T Consensus 114 ~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~---~~~~~~ 189 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTMH 189 (410)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSC---EEECCC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc---eeEEEc
Confidence 33344455555554 45799999877554444545566788999998555 55565666778888887653 223333
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
..-.....+++.+.+ ..+++-...+.|...++........+... -.....+++.+ ++.++++
T Consensus 190 ~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h----------------~~~v~~~~~~~-~g~~l~s 251 (410)
T 1vyh_C 190 GHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGH----------------REWVRMVRPNQ-DGTLIAS 251 (410)
T ss_dssp CCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECC----------------SSCEEEEEECT-TSSEEEE
T ss_pred CCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCC----------------CccEEEEEECC-CCCEEEE
Confidence 334567889998754 45556667889999998655433222111 11345566664 4456666
Q ss_pred eCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCC-------------------CEEEEEeCCCCCCeEEEEecCCCc
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAH-------------------GYLFWSDWNEKRPKIERSLLNGGE 254 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~-------------------g~Ly~~d~~~~~~~I~~~~~dg~~ 254 (357)
....+.|...+...................++++|.. |.+.++-... +.|...++....
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D--~~i~iwd~~~~~ 329 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD--KTIKMWDVSTGM 329 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT--SEEEEEETTTTE
T ss_pred EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC--CeEEEEECCCCc
Confidence 6667788888877654444343344556778887742 3344444442 578888877554
Q ss_pred eEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC-CEEEEEeCCCCeEEEE
Q psy13635 255 RVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLG-DYVYWTDWQRRSIDRV 332 (357)
Q Consensus 255 ~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~-~~ly~td~~~~~I~~~ 332 (357)
....+...-....++++++.+..|+ +-...+.|...+.........+...-....++++.. +...++-...+.|...
T Consensus 330 ~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW 407 (410)
T 1vyh_C 330 CLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407 (410)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCEE-EEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred eEEEEECCCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 4444444445678999986555554 555677888888755433233333444566777763 4444444455555443
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.65 E-value=2.4e-05 Score=78.57 Aligned_cols=255 Identities=10% Similarity=0.025 Sum_probs=154.7
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC--
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG-- 148 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g-- 148 (357)
..+.+++++++ +.+.++. ++.|+..++.+.. ...+...-..+..+++.+.++.|+++. .+.|...++++
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~SpdG~~la~~~--~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARK----VTYLFDTNEETASLDFSPVGDRVAYVR--NHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTE----EEEEECCTTCCTTCEECTTSSEEEEEE--TTEEEEEECBCTT
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCc----eEEccCCcccccCCcCCCCCCEEEEEE--CCeEEEEecCccc
Confidence 45788999998 8777763 3789999998763 333333344577889999888888864 57899999876
Q ss_pred ---CceEEEEecCCCC-cceeeeeccCcccccCCceEEEeCCCCeEEEEeC-----------------------------
Q psy13635 149 ---KKRKVLYWEDIDQ-PRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT----------------------------- 195 (357)
Q Consensus 149 ---~~~~~~~~~~~~~-p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~----------------------------- 195 (357)
.....+...+... ..++++ ..+.+..+.++++.+.+..|+++..
T Consensus 153 ~~~g~~~~~~~~~~~~~~~g~~~---~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g 229 (706)
T 2z3z_A 153 EGMSRAIAVTIDGTETLVYGQAV---HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG 229 (706)
T ss_dssp SCCCCCEESCSCCBTTEEESSCC---GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred ccCCCcEEeccCCCCCeEcccch---hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence 4433322111000 000000 0122334688999988888887751
Q ss_pred ---CCCeEEEEEcCCCceEEEecC--CCCCceEEEEeCCCCEEEEEeCCC--CCCeEEEEecCCC-ceEEEeeC-CC---
Q psy13635 196 ---GTDRIEVCRLEGTHRKVLVNT--DLVEPRAITLSPAHGYLFWSDWNE--KRPKIERSLLNGG-ERVLLVKD-RL--- 263 (357)
Q Consensus 196 ---~~~~I~~~~~~g~~~~~~~~~--~~~~P~giavd~~~g~Ly~~d~~~--~~~~I~~~~~dg~-~~~~~~~~-~l--- 263 (357)
....|.+.++++.....+... ....+..++++|.+..|+++.... ....|...+.++. ....+... .-
T Consensus 230 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 230 TPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp SCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 224788888887655443321 123467899999877888865432 1237888888776 44444322 11
Q ss_pred CCceEEEEec--CCCEEEEEeC-CCCeEEEEeCCCCCeEEEecCCCCceEE-EEEE--CCEEEEEeCCCC----eEEEEe
Q psy13635 264 GWPNGITLDV--DNEKLYWCDA-KTDKIEMIDFDGNNRRELINENLPHVFG-ISLL--GDYVYWTDWQRR----SIDRVN 333 (357)
Q Consensus 264 ~~P~giaid~--~~~~lY~~d~-~~~~I~~~~~dG~~~~~i~~~~~~~p~g-ia~~--~~~ly~td~~~~----~I~~~~ 333 (357)
....++++.+ ++..||.++. +..+|+.++.+|...+.+.. ......+ +++. ++.||++....+ .|++++
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 1135678875 4444444433 34578888877765554432 2222333 4554 468888877654 788888
Q ss_pred CccCc
Q psy13635 334 KITGN 338 (357)
Q Consensus 334 ~~~g~ 338 (357)
..+++
T Consensus 389 ~~~~~ 393 (706)
T 2z3z_A 389 IKGGK 393 (706)
T ss_dssp TTCCC
T ss_pred cCCCC
Confidence 75554
No 158
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.64 E-value=0.00019 Score=66.35 Aligned_cols=236 Identities=6% Similarity=-0.072 Sum_probs=144.9
Q ss_pred EEeecCCCCeEEEEEeC-CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 33 YALSHHVAAQMLLFATS-KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
.++.-++...+|+.+.. ..|+..+.++ ..............++++.+.+..|+.+. .++.|...++.... ....
T Consensus 112 ~~~~~s~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~---~~~~ 186 (425)
T 1r5m_A 112 TCLAWSHDGNSIVTGVENGELRLWNKTG-ALLNVLNFHRAPIVSVKWNKDGTHIISMD-VENVTILWNVISGT---VMQH 186 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCCSCEEEEEECTTSSEEEEEE-TTCCEEEEETTTTE---EEEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCC-CeeeeccCCCccEEEEEECCCCCEEEEEe-cCCeEEEEECCCCc---EEEE
Confidence 34444555566666654 4688888554 33444444566789999998777666554 45678888886553 1222
Q ss_pred EeCCcCC---------------ceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCccccc
Q psy13635 112 ITNGLIT---------------PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVE 176 (357)
Q Consensus 112 ~~~~~~~---------------p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~ 176 (357)
+...... +..+++.+ ++. +++-...+.|...++........... .-.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~----------------~~~ 248 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVD-DDK-FVIPGPKGAIFVYQITEKTPTGKLIG----------------HHG 248 (425)
T ss_dssp ECCC---------------CCCBSCCEEEE-TTE-EEEECGGGCEEEEETTCSSCSEEECC----------------CSS
T ss_pred eeccccCccceeeccccCCcceeeEEEEcC-CCE-EEEEcCCCeEEEEEcCCCceeeeecc----------------CCC
Confidence 2222222 66777775 344 55556678899888876533222211 112
Q ss_pred CCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceE
Q psy13635 177 HPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERV 256 (357)
Q Consensus 177 ~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~ 256 (357)
....+++.+.+..|+ +....+.|...+...................++++|. +.++.+... +.|...++......
T Consensus 249 ~i~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d---~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 249 PISVLEFNDTNKLLL-SASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD-DKVISCSMD---GSVRLWSLKQNTLL 323 (425)
T ss_dssp CEEEEEEETTTTEEE-EEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETT-TEEEEEETT---SEEEEEETTTTEEE
T ss_pred ceEEEEECCCCCEEE-EEcCCCEEEEEECCCCccceEecCCCccEEEEEECCC-CEEEEEeCC---CcEEEEECCCCcEe
Confidence 456788887665555 4445578888887754433333334456789999986 444444433 58988998766555
Q ss_pred EEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 257 LLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 257 ~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
......-..+..+++.+.+..|+.+ ...+.|...+.....
T Consensus 324 ~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 324 ALSIVDGVPIFAGRISQDGQKYAVA-FMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEECTTCCEEEEEECTTSSEEEEE-ETTSCEEEEECHHHH
T ss_pred EecccCCccEEEEEEcCCCCEEEEE-ECCCeEEEEECCCCc
Confidence 5554445567899998655555544 456788888875433
No 159
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.62 E-value=8.6e-06 Score=75.72 Aligned_cols=247 Identities=11% Similarity=0.036 Sum_probs=153.6
Q ss_pred CCCCeEEEEEe-CCcEEEEEcCCC----CcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCC------cc
Q psy13635 38 HVAAQMLLFAT-SKDIRIANLSRP----LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNN------VG 106 (357)
Q Consensus 38 ~~~~~~l~~~~-~~~i~~~~~~~~----~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~------~~ 106 (357)
++...+|+.+. ...|+..++... ...............+++++.++.++.+-..++.|+..++.... ..
T Consensus 76 s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 155 (416)
T 2pm9_A 76 SHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTP 155 (416)
T ss_dssp CSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCC
T ss_pred CCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccc
Confidence 44555566655 457888888761 22233334455678899998756666777777888888887653 10
Q ss_pred eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 107 SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 107 ~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
............+..+++.+.++.++++....+.|...++.............. . ...-..+..+++.+.
T Consensus 156 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~---------~~~~~~v~~~~~~~~ 225 (416)
T 2pm9_A 156 LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP-N---------SGIKQQLSVVEWHPK 225 (416)
T ss_dssp BCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC-S---------SCCCCCEEEEEECSS
T ss_pred cccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc-c---------cccCCceEEEEECCC
Confidence 000011223345788999987677888877889999999876544333221100 0 000235678889887
Q ss_pred CCeEEEEeCCCC---eEEEEEcCCC-ceEEEec-CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC
Q psy13635 187 ARNLYWTDTGTD---RIEVCRLEGT-HRKVLVN-TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD 261 (357)
Q Consensus 187 ~~~lY~td~~~~---~I~~~~~~g~-~~~~~~~-~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~ 261 (357)
++.++++....+ .|...++... ....... .....+..++++|.++.++++-... +.|...++........+..
T Consensus 226 ~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d--g~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 226 NSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD--NTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp CTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS--SEEEEECSSSCCEEEEEEC
T ss_pred CCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC--CCEEEeeCCCCccceeecC
Confidence 766666665555 8888888753 2222222 2345678999998445444444432 5888888876555444444
Q ss_pred CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC
Q psy13635 262 RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 262 ~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~ 296 (357)
.-.....+++.+.+..++++-...+.|...++...
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 44566789998655467777777788888887653
No 160
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.61 E-value=0.00025 Score=62.70 Aligned_cols=269 Identities=8% Similarity=0.029 Sum_probs=159.6
Q ss_pred EEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCcee
Q psy13635 43 MLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDG 121 (357)
Q Consensus 43 ~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~g 121 (357)
+++.+. ...|+..|+.+...............++++++.+..|+.+. .++.|...++...........+.........
T Consensus 31 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 109 (313)
T 3odt_A 31 KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG-KDTMINGVPLFATSGEDPLYTLIGHQGNVCS 109 (313)
T ss_dssp EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTCCTTSCC-CEECCCSSCEEE
T ss_pred EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-CCCeEEEEEeeecCCCCcccchhhcccCEEE
Confidence 344444 45688888866444444445566789999999766666554 4567777776544311112233333345566
Q ss_pred EEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEE
Q psy13635 122 LAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIE 201 (357)
Q Consensus 122 lavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~ 201 (357)
++++ ++ ++++-...+.|...+ .+.....+.. .-.....+++.+..+..+++....+.|.
T Consensus 110 ~~~~--~~-~l~~~~~d~~i~~~d-~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 168 (313)
T 3odt_A 110 LSFQ--DG-VVISGSWDKTAKVWK-EGSLVYNLQA-----------------HNASVWDAKVVSFSENKFLTASADKTIK 168 (313)
T ss_dssp EEEE--TT-EEEEEETTSEEEEEE-TTEEEEEEEC-----------------CSSCEEEEEEEETTTTEEEEEETTSCEE
T ss_pred EEec--CC-EEEEEeCCCCEEEEc-CCcEEEeccc-----------------CCCceeEEEEccCCCCEEEEEECCCCEE
Confidence 7774 44 445555678888888 3332222211 1123456666654455555555567788
Q ss_pred EEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEE
Q psy13635 202 VCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWC 281 (357)
Q Consensus 202 ~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~ 281 (357)
..+ .+.....+..........++++|. +.++.+... +.|...++........+........++++.+.+ +|+ +
T Consensus 169 i~d-~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~-~ 241 (313)
T 3odt_A 169 LWQ-NDKVIKTFSGIHNDVVRHLAVVDD-GHFISCSND---GLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIV-S 241 (313)
T ss_dssp EEE-TTEEEEEECSSCSSCEEEEEEEET-TEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEE-E
T ss_pred EEe-cCceEEEEeccCcccEEEEEEcCC-CeEEEccCC---CeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEE-E
Confidence 877 333333333224456788999975 665544443 588888887655554444445567899998544 554 4
Q ss_pred eCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC-CEEEEEeCCCCeEEEEeCccCceeE
Q psy13635 282 DAKTDKIEMIDFDGNNRRELINENLPHVFGISLLG-DYVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 282 d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~-~~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
-...+.|...+.........+.........+++.. +.+ ++-...+.|...+..+++...
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDI-IVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp EETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCE-EEEETTSCEEEEESCGGGCCC
T ss_pred EecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCE-EEEeCCCcEEEEeCCCCceee
Confidence 44578899999865544444443444567788863 454 445566888888876665443
No 161
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.61 E-value=8.5e-05 Score=68.10 Aligned_cols=237 Identities=8% Similarity=-0.052 Sum_probs=148.4
Q ss_pred CCCCeEEEEEeCCcEEEEEcCCCCcceEe----ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe
Q psy13635 38 HVAAQMLLFATSKDIRIANLSRPLKPVTI----IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 38 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
+++..++.-+....|+..|+..+...... ...-....+++|++.+..| .+-..++.|+..++.... ....+.
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l-~sgs~d~~i~iwd~~~~~---~~~~~~ 166 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQA-VSGSKDICIKVWDLAQQV---VLSSYR 166 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTE---EEEEEC
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEE-EEEeCCCeEEEEECCCCc---EEEEEc
Confidence 33444444444667888898764433222 1344568899999865555 455566788888887653 233343
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
..-.....+++.+.+..++.+-...+.|...++........+.. ......+..+++.+.+++++++
T Consensus 167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--------------~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 167 AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC--------------SAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC------------------CCCEEEEEECSSCTTEEEE
T ss_pred CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeec--------------ceeeccceeeeecCCCCcceEE
Confidence 34456788999887778888888888999998865433221110 1111245678888888888888
Q ss_pred eCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEec
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDV 273 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~ 273 (357)
....+.|...+...................++++|.+..+..+-... +.|...+........+ ...-....++++.+
T Consensus 233 g~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D--~~i~vwd~~~~~~~~~-~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 233 GDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED--CSLAVLDSSLSELFRS-QAHRDFVRDATWSP 309 (344)
T ss_dssp EETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT--SCEEEECTTCCEEEEE-CCCSSCEEEEEECS
T ss_pred eccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC--CeEEEEECCCCcEEEE-cCCCCCEEEEEEeC
Confidence 77778899988874433322333445678999998755554444332 4777777765543332 22334568899987
Q ss_pred CCCEEEEEeCCCCeEEEEeCCC
Q psy13635 274 DNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 274 ~~~~lY~~d~~~~~I~~~~~dG 295 (357)
.+..|+.+-...+.|..-+++.
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC
T ss_pred CCCeEEEEEcCCCeEEEEECCC
Confidence 7777776665566776666543
No 162
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.60 E-value=0.00029 Score=62.97 Aligned_cols=257 Identities=9% Similarity=0.021 Sum_probs=158.9
Q ss_pred EeecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE
Q psy13635 34 ALSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI 112 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 112 (357)
+++-++..++|+-+. ...|+..|+.................++++.+.++.|..+ ..++.|+..++.... ....+
T Consensus 18 ~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~vwd~~~~~---~~~~~ 93 (304)
T 2ynn_A 18 GIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGE---KVVDF 93 (304)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCC---EEEEE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEE-CCCCEEEEEECCCCc---EEEEE
Confidence 444456667776666 4568889987644444444445567889999876666544 456788888887653 23334
Q ss_pred eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEE
Q psy13635 113 TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLY 191 (357)
Q Consensus 113 ~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY 191 (357)
...-.....+++.+.+ .+..+-...+.|...++..... ..... + .-.....++++|.++.++
T Consensus 94 ~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~-~---------------h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 94 EAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFE-G---------------HEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp ECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEEC-C---------------CCSCEEEEEECTTCTTEE
T ss_pred eCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhc-c---------------cCCcEEEEEECCCCCCEE
Confidence 4444567899999754 4556666788999998865432 22221 1 112456788887777777
Q ss_pred EEeCCCCeEEEEEcCCCce-EEEecCCCCCceEEEEeCC-CC-EEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceE
Q psy13635 192 WTDTGTDRIEVCRLEGTHR-KVLVNTDLVEPRAITLSPA-HG-YLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNG 268 (357)
Q Consensus 192 ~td~~~~~I~~~~~~g~~~-~~~~~~~~~~P~giavd~~-~g-~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~g 268 (357)
.+....+.|...++..... ..+..........+++.|. ++ .|.-+... +.|...++........+.........
T Consensus 157 ~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D---~~i~iWd~~~~~~~~~~~~h~~~v~~ 233 (304)
T 2ynn_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD---LTIKIWDYQTKSCVATLEGHMSNVSF 233 (304)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETT---SEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCC---CeEEEEeCCCCccceeeCCCCCCEEE
Confidence 7777778898888764433 2332222234456666653 23 34433333 58888888766555445455556678
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE
Q psy13635 269 ITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL 315 (357)
Q Consensus 269 iaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~ 315 (357)
+++.+... +.++-...+.|...+.........+.........+++.
T Consensus 234 ~~~~p~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~ 279 (304)
T 2ynn_A 234 AVFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATH 279 (304)
T ss_dssp EEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEEC
T ss_pred EEECCCCC-EEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEEC
Confidence 88986544 55555567788888886555444444444556677765
No 163
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.59 E-value=0.00035 Score=63.12 Aligned_cols=259 Identities=10% Similarity=0.055 Sum_probs=157.5
Q ss_pred CCcEEEEEcCCCC-cceE-eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEc
Q psy13635 49 SKDIRIANLSRPL-KPVT-IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDW 126 (357)
Q Consensus 49 ~~~i~~~~~~~~~-~~~~-~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~ 126 (357)
+..|+..++.... .... +........++++.+... +..+...++.|+..++.... ....+.........+++.+
T Consensus 57 D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~-~l~s~s~D~~i~lWd~~~~~---~~~~~~~~~~~~~~~~~sp 132 (321)
T 3ow8_A 57 DDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLWDLENGK---QIKSIDAGPVDAWTLAFSP 132 (321)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTTE---EEEEEECCTTCCCCEEECT
T ss_pred CCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCC---EEEEEeCCCccEEEEEECC
Confidence 4557777765421 1111 223445678889987544 55566667888888887653 2334444445677899997
Q ss_pred CCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC
Q psy13635 127 LTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE 206 (357)
Q Consensus 127 ~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~ 206 (357)
.+ +.+.+....+.|...++............ -.....+++.+.+..|. +....+.|...++.
T Consensus 133 dg-~~l~~g~~dg~v~i~~~~~~~~~~~~~~~----------------~~~v~~~~~spdg~~la-sg~~dg~i~iwd~~ 194 (321)
T 3ow8_A 133 DS-QYLATGTHVGKVNIFGVESGKKEYSLDTR----------------GKFILSIAYSPDGKYLA-SGAIDGIINIFDIA 194 (321)
T ss_dssp TS-SEEEEECTTSEEEEEETTTCSEEEEEECS----------------SSCEEEEEECTTSSEEE-EEETTSCEEEEETT
T ss_pred CC-CEEEEEcCCCcEEEEEcCCCceeEEecCC----------------CceEEEEEECCCCCEEE-EEcCCCeEEEEECC
Confidence 54 45556667789999988765544332211 12356788886555554 44556788888887
Q ss_pred CCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCC
Q psy13635 207 GTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTD 286 (357)
Q Consensus 207 g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~ 286 (357)
.................++++|....|..+... +.|...++........+.........+++.+.+..| ++-...+
T Consensus 195 ~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l-~s~s~D~ 270 (321)
T 3ow8_A 195 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDD---GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF-VSSSSDK 270 (321)
T ss_dssp TTEEEEEECCCSSCCCEEEECTTSCEEEEECTT---SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE-EEEETTS
T ss_pred CCcEEEEEcccCCceeEEEEcCCCCEEEEEcCC---CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEE-EEEeCCC
Confidence 554433333333456899999875555444433 578888887665554444444567889998655554 4555567
Q ss_pred eEEEEeCCCCCeEEEecCCCCceEEEEEEC-CEEEEEeCCCCeEEEEe
Q psy13635 287 KIEMIDFDGNNRRELINENLPHVFGISLLG-DYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 287 ~I~~~~~dG~~~~~i~~~~~~~p~gia~~~-~~ly~td~~~~~I~~~~ 333 (357)
.|...+.........+........++++.. +...++-...+.|...+
T Consensus 271 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 271 SVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred cEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 888888865444333333445567788763 44444444556665544
No 164
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.59 E-value=0.00063 Score=69.04 Aligned_cols=260 Identities=8% Similarity=-0.041 Sum_probs=161.5
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
.-....+++++|.+..|..+. .++.|...+..... ....+...-....++++++.++.|..+. ..+.|...+++.
T Consensus 12 h~~~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~ 86 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEPWVLTTL-YSGRVEIWNYETQV---EVRSIQVTETPVRAGKFIARKNWIIVGS-DDFRIRVFNYNT 86 (814)
T ss_dssp ECSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTE---EEEEEECCSSCEEEEEEEGGGTEEEEEE-TTSEEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEe-CCCEEEEEECCCCc---eEEEEecCCCcEEEEEEeCCCCEEEEEe-CCCeEEEEECCC
Confidence 344678899999777776665 45788888876653 2334444445678999998666666554 478999999865
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC-ceEEEecCCCCCceEEEEe
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT-HRKVLVNTDLVEPRAITLS 227 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~-~~~~~~~~~~~~P~giavd 227 (357)
.......... -.....+++.+.+..|..+. ..+.|...+.+.. ...............++++
T Consensus 87 ~~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~ 149 (814)
T 3mkq_A 87 GEKVVDFEAH----------------PDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (814)
T ss_dssp CCEEEEEECC----------------SSCEEEEEECSSSSEEEEEE-TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEE
T ss_pred CcEEEEEecC----------------CCCEEEEEEeCCCCEEEEEc-CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEE
Confidence 5433322211 12456788887666666444 4578888888754 3333343344567899999
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-CCCceEEEEecC-CCEEEEEeCCCCeEEEEeCCCCCeEEEecCC
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR-LGWPNGITLDVD-NEKLYWCDAKTDKIEMIDFDGNNRRELINEN 305 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~-l~~P~giaid~~-~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~ 305 (357)
|.++.++++-... +.|...++............ ......+++.+. ++..+++-...+.|...+.........+...
T Consensus 150 p~~~~~l~~~~~d--g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 227 (814)
T 3mkq_A 150 PKDPSTFASGCLD--RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227 (814)
T ss_dssp TTEEEEEEEEETT--SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred cCCCCEEEEEeCC--CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 8556555554442 58888888655443333333 255678888751 4455555566788999987654443333334
Q ss_pred CCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCcee
Q psy13635 306 LPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVT 352 (357)
Q Consensus 306 ~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~ 352 (357)
......+++. .+.++++-...+.|...+..+++....+......+..
T Consensus 228 ~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~ 275 (814)
T 3mkq_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC 275 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEE
Confidence 4456677776 3445555555678888887677766665544443333
No 165
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.57 E-value=0.00032 Score=63.74 Aligned_cols=238 Identities=7% Similarity=-0.048 Sum_probs=140.0
Q ss_pred eecCCCCeEEEEE-eCCcEEEEEcCCCC--cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 35 LSHHVAAQMLLFA-TSKDIRIANLSRPL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 35 ~~~~~~~~~l~~~-~~~~i~~~~~~~~~--~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
+.-++...+++.+ ....|+..|+.+.. .............++++++.+..|+.+. .++.|...++..... ....
T Consensus 14 ~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~--~~~~ 90 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTW--KPTL 90 (372)
T ss_dssp EEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEE--EEEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCee--eeeE
Confidence 3344555667666 35678888887642 3333334556788999999766666554 557788888765531 1122
Q ss_pred -EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 112 -ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 112 -~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
....-..+..+++.+.++.|+.+. ..+.|...+++............ ...-..+..+++.+.+..|
T Consensus 91 ~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 91 VILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIK------------KPIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEEC------------TTCCSCEEEEEECTTSSEE
T ss_pred EeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeee------------cccCCCeeEEEEcCCCCEE
Confidence 223345678899997665555544 56778777766544211110000 0011246778888755444
Q ss_pred EEEeCCCCeEEEEEcC-------------------CCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 191 YWTDTGTDRIEVCRLE-------------------GTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~-------------------g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
+ +....+.|...+.. +..... ..........++++|....|+.+... +.|...++.
T Consensus 158 ~-~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~ 232 (372)
T 1k8k_C 158 A-AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE-SSSSCGWVHGVCFSANGSRVAWVSHD---STVCLADAD 232 (372)
T ss_dssp E-EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE-CCCCSSCEEEEEECSSSSEEEEEETT---TEEEEEEGG
T ss_pred E-EEcCCCCEEEEEcccccccccccccccccccchhhheEe-cCCCCCeEEEEEECCCCCEEEEEeCC---CEEEEEECC
Confidence 4 54455778888743 222222 22234567899999876667666644 588888886
Q ss_pred CCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 252 GGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 252 g~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
.......+.........+++++ ++.++.+- ..+.|...+.+.
T Consensus 233 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 233 KKMAVATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp GTTEEEEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEET
T ss_pred CCceeEEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccC
Confidence 5555444444444568999985 45554444 556666665543
No 166
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.57 E-value=4.7e-05 Score=71.78 Aligned_cols=255 Identities=8% Similarity=0.062 Sum_probs=163.8
Q ss_pred ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCC-------CcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCC
Q psy13635 67 IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGN-------NVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETN 139 (357)
Q Consensus 67 ~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~-------~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~ 139 (357)
......+..+++.+.++.++.+-..++.|+..++... ........+...-..+.++++++.+..++++....+
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 3455677889999876778888777888888888641 000113333344456789999986665777777789
Q ss_pred EEEEEEcCCCce--EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC---ceEEEe
Q psy13635 140 KLEVSSLDGKKR--KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT---HRKVLV 214 (357)
Q Consensus 140 ~I~~~~~~g~~~--~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~---~~~~~~ 214 (357)
.|...++..... ..+.... .+ ...-..+.++++.+.++.++++....+.|...++... ......
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~-----~~------~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKN-----IF------TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSE-----EE------CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred eEEEEeCCCCCCCCceeccce-----ee------cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence 999999875211 1110000 00 1111246788898878888888888899999998754 222222
Q ss_pred cCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC-ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeC
Q psy13635 215 NTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG-ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 215 ~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~-~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~ 293 (357)
...-..++.++++|....++++-... +.|...++... .....+...-.....+++.+.+..++++-...+.|...++
T Consensus 274 ~~~~~~v~~i~~~p~~~~~l~tg~~d--g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~ 351 (430)
T 2xyi_A 274 DAHTAEVNCLSFNPYSEFILATGSAD--KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 351 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEETT--SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEG
T ss_pred ecCCCCeEEEEeCCCCCCEEEEEeCC--CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeC
Confidence 23445689999999766677666553 58888888752 2223333344567899998777778888777788888887
Q ss_pred CCC--------------CeEEEecCCCCceEEEEEEC-C-EEEEEeCCCCeEEEEeC
Q psy13635 294 DGN--------------NRRELINENLPHVFGISLLG-D-YVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 294 dG~--------------~~~~i~~~~~~~p~gia~~~-~-~ly~td~~~~~I~~~~~ 334 (357)
... ............+..+++.. + +++++....+.|...+.
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 352 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp GGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 541 22222223344688888873 3 37777777787766654
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.56 E-value=2.5e-05 Score=77.78 Aligned_cols=238 Identities=11% Similarity=-0.007 Sum_probs=145.0
Q ss_pred CCCeE-EEEEeC--CcEEEEEcC--CCCcceEecc-----CCCcEEEEEEEccCCEEEEEeCC---------CCeEEEEE
Q psy13635 39 VAAQM-LLFATS--KDIRIANLS--RPLKPVTIIK-----DLEEGAAIDYYYKKSMVCWTDHG---------TEMISCCT 99 (357)
Q Consensus 39 ~~~~~-l~~~~~--~~i~~~~~~--~~~~~~~~~~-----~~~~~~~i~~d~~~~~ly~~d~~---------~~~I~~~~ 99 (357)
+.... |+++.. ..|+.++++ ++.....+.. ......++++++++..|+++... ...|+.++
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 44555 777764 468889887 3023333333 23467789999999999887543 14799999
Q ss_pred cCC------CCcceeEEEEe-CCcCCceeEEEEcCCCeEEEEeCCC-------CEEEEEEcCC-C---ceEEEEecCCCC
Q psy13635 100 FDG------NNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSET-------NKLEVSSLDG-K---KRKVLYWEDIDQ 161 (357)
Q Consensus 100 ~~g------~~~~~~~~~~~-~~~~~p~glavd~~~~~ly~td~~~-------~~I~~~~~~g-~---~~~~~~~~~~~~ 161 (357)
+++ .. ...+. .+.....++++.+.++.|+++.... ..|..+++++ . ..+.+....
T Consensus 168 ~~~~~~~~~~~----~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~--- 240 (662)
T 3azo_A 168 LDGSAAADRSA----VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP--- 240 (662)
T ss_dssp TTSTTTTCGGG----SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET---
T ss_pred CCCCccccCCc----eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC---
Confidence 988 43 33444 4444567788999888998876432 5899999884 3 333332210
Q ss_pred cceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC--eEEEEEcCCCceEEEecCCCCC--------ceEEEEeCCCC
Q psy13635 162 PRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD--RIEVCRLEGTHRKVLVNTDLVE--------PRAITLSPAHG 231 (357)
Q Consensus 162 p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~--~I~~~~~~g~~~~~~~~~~~~~--------P~giavd~~~g 231 (357)
-..+..+++.+.+. +|++....+ +|++.++++...+.+....... ...+++.+. +
T Consensus 241 -------------~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~-~ 305 (662)
T 3azo_A 241 -------------EEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLAN-G 305 (662)
T ss_dssp -------------TBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTT-S
T ss_pred -------------CceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCC-C
Confidence 12455677776555 666655444 8999988665554444321111 356788765 5
Q ss_pred EEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEE-EEecCCCEEEEEeCCC---CeEEEEeCCCCCeEEEe
Q psy13635 232 YLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGI-TLDVDNEKLYWCDAKT---DKIEMIDFDGNNRRELI 302 (357)
Q Consensus 232 ~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gi-aid~~~~~lY~~d~~~---~~I~~~~~dG~~~~~i~ 302 (357)
+++++.... ..+|++++.++.....+. .......++ +.| ++.++++-... ..|+.++.++...+.+.
T Consensus 306 ~~~~~~~~~-~~~l~~~d~~~~~~~~l~-~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 306 LIAVVHGKG-AAVLGILDPESGELVDAA-GPWTEWAATLTVS--GTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp CEEEEEBSS-SCEEEEEETTTTEEEECC-SSCCEEEEEEEEE--TTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEEEEEEcC-ccEEEEEECCCCcEEEec-CCCCeEEEEEecC--CCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 555554333 479999999877655442 222334455 554 55665543322 37888888776665554
No 168
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.56 E-value=0.00052 Score=63.69 Aligned_cols=274 Identities=9% Similarity=0.007 Sum_probs=161.1
Q ss_pred EeecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccC------------------CCcEEEEEEEccCCEEEEEeCCCCeE
Q psy13635 34 ALSHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKD------------------LEEGAAIDYYYKKSMVCWTDHGTEMI 95 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~------------------~~~~~~i~~d~~~~~ly~~d~~~~~I 95 (357)
|+.-++...+|..+....++..++..+.....+... .....+++|++.+..|. +...++.|
T Consensus 69 ~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~-s~~~d~~i 147 (393)
T 1erj_A 69 CVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA-TGAEDRLI 147 (393)
T ss_dssp EEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE-EEETTSCE
T ss_pred EEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE-EEcCCCeE
Confidence 445555666777776777888887653322222111 11267899998655554 44556788
Q ss_pred EEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccc
Q psy13635 96 SCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEV 175 (357)
Q Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~ 175 (357)
+..++.... ....+.........+++.+.++.| ++-...+.|...++............
T Consensus 148 ~iwd~~~~~---~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~v~iwd~~~~~~~~~~~~~----------------- 206 (393)
T 1erj_A 148 RIWDIENRK---IVMILQGHEQDIYSLDYFPSGDKL-VSGSGDRTVRIWDLRTGQCSLTLSIE----------------- 206 (393)
T ss_dssp EEEETTTTE---EEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEEEEEECS-----------------
T ss_pred EEEECCCCc---EEEEEccCCCCEEEEEEcCCCCEE-EEecCCCcEEEEECCCCeeEEEEEcC-----------------
Confidence 888887653 233444444567889998755555 55556789999998765443332211
Q ss_pred cCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCce-EEEe------cCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEE
Q psy13635 176 EHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHR-KVLV------NTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERS 248 (357)
Q Consensus 176 ~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~-~~~~------~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~ 248 (357)
.....+++.+.+++++++....+.|...+...... ..+. .........++++|.+..|+.+... +.|...
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d---~~v~~w 283 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD---RSVKLW 283 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT---SEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC---CEEEEE
Confidence 23566777776677777777777888888764433 2221 1123457889999876666555444 466666
Q ss_pred ecCCCce------------EEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC
Q psy13635 249 LLNGGER------------VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLG 316 (357)
Q Consensus 249 ~~dg~~~------------~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~ 316 (357)
++..... ...+...-.....+++.+.+..| ++-...+.|...+.........+.........+++..
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI-LSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 362 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGGGCEE-EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecC
Confidence 6543211 11122223345678887555544 4445567888888765444334433444556677653
Q ss_pred -------CEEEEEeCCCCeEEEEe
Q psy13635 317 -------DYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 317 -------~~ly~td~~~~~I~~~~ 333 (357)
+.++++-...+.|..-+
T Consensus 363 ~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 363 GSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp SCTTCTTCEEEEEEETTSEEEEEE
T ss_pred CcCcCCCCCEEEEECCCCcEEECc
Confidence 56777766667765444
No 169
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.55 E-value=6.1e-06 Score=81.08 Aligned_cols=233 Identities=9% Similarity=-0.007 Sum_probs=140.0
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc-CCceeEEEEcCCCeEEEEeC--C--CCEEEEEEc
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-ITPDGLAIDWLTEKLYWTDS--E--TNKLEVSSL 146 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~p~glavd~~~~~ly~td~--~--~~~I~~~~~ 146 (357)
...++++++++.+|.++...++.+....++|+. ...+...- ....++++.+. +.+|+++. + ..+|+.+++
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~----~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE----TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTE----EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCC----cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 467889999888998776545554444456653 33333222 34566677655 67788875 2 237777888
Q ss_pred --CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEE
Q psy13635 147 --DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAI 224 (357)
Q Consensus 147 --~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~gi 224 (357)
+|.... +. . .......++.+.++.++++....+.+...++++...+.+..... ..+
T Consensus 98 ~~~g~~~~-l~-~-----------------~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~ 155 (582)
T 3o4h_A 98 SRPGEEQR-LE-A-----------------VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGF 155 (582)
T ss_dssp TSTTCCEE-CT-T-----------------SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEE
T ss_pred cCCCcccc-cc-C-----------------CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceE
Confidence 666542 11 0 01222345555565555554444555577887766655554322 789
Q ss_pred EEeCCCCEEEEEeCCCC-CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCC-CeEEEEeCCCCCeEEEe
Q psy13635 225 TLSPAHGYLFWSDWNEK-RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKT-DKIEMIDFDGNNRRELI 302 (357)
Q Consensus 225 avd~~~g~Ly~~d~~~~-~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~-~~I~~~~~dG~~~~~i~ 302 (357)
+++|++..|+++..... ...|+..++++...+.+. ........+++.+++..|+.++... ..|+..+.++...+ +.
T Consensus 156 ~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~ 233 (582)
T 3o4h_A 156 VSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL 233 (582)
T ss_dssp EEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC
T ss_pred EECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec
Confidence 99998888886654311 147999998877776664 3334568899998888888555432 38999999887766 54
Q ss_pred cCCCCceEEEE--------EE-CCEEEEEeCCCCeEEEEe
Q psy13635 303 NENLPHVFGIS--------LL-GDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 303 ~~~~~~p~gia--------~~-~~~ly~td~~~~~I~~~~ 333 (357)
......+.+++ +. +|.+|++....+++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 234 ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEE
Confidence 33222222233 54 346666655555554444
No 170
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.53 E-value=0.00011 Score=68.38 Aligned_cols=249 Identities=9% Similarity=-0.013 Sum_probs=154.3
Q ss_pred CCcEEEEEcCCCC----cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc----eeEEEEeCCcCCce
Q psy13635 49 SKDIRIANLSRPL----KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG----SKHNVITNGLITPD 120 (357)
Q Consensus 49 ~~~i~~~~~~~~~----~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~----~~~~~~~~~~~~p~ 120 (357)
...|...+++... .............++++++.++.++.+-..++.|...++...... +....+...-..+.
T Consensus 56 ~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~ 135 (402)
T 2aq5_A 56 GGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG 135 (402)
T ss_dssp SCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE
T ss_pred CCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE
Confidence 4568888875532 122223345578899999844555555556778888887765210 11233344446688
Q ss_pred eEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEe-cCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCe
Q psy13635 121 GLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYW-EDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDR 199 (357)
Q Consensus 121 glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~ 199 (357)
.+++.+.+++++++-...+.|...++........+. .. .-.....+++.+.+..|+ +....+.
T Consensus 136 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~l~-~~~~d~~ 199 (402)
T 2aq5_A 136 IVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV---------------HPDTIYSVDWSRDGALIC-TSCRDKR 199 (402)
T ss_dssp EEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT---------------CCSCEEEEEECTTSSCEE-EEETTSE
T ss_pred EEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC---------------CCCceEEEEECCCCCEEE-EEecCCc
Confidence 899998766777777778899999987654433321 11 112457788887555555 4445678
Q ss_pred EEEEEcCCCceEEEe-cCC-CCCceEEEEeCCCCEEEEEe---CCCCCCeEEEEecCCCce--EEEeeCCCCCceEEEEe
Q psy13635 200 IEVCRLEGTHRKVLV-NTD-LVEPRAITLSPAHGYLFWSD---WNEKRPKIERSLLNGGER--VLLVKDRLGWPNGITLD 272 (357)
Q Consensus 200 I~~~~~~g~~~~~~~-~~~-~~~P~giavd~~~g~Ly~~d---~~~~~~~I~~~~~dg~~~--~~~~~~~l~~P~giaid 272 (357)
|...++......... ... ...+..++++|. +.++.+- .. .+.|...++..... ..........+..++++
T Consensus 200 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 276 (402)
T 2aq5_A 200 VRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRMS--ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD 276 (402)
T ss_dssp EEEEETTTTEEEEEEECSSCSSSCCEEEECST-TEEEEEEECTTC--CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE
T ss_pred EEEEeCCCCceeeeeccCCCCCcceEEEEcCC-CcEEEEeccCCC--CceEEEEcCccccCCceEEeccCCCceeEEEEc
Confidence 999998754433332 222 234789999986 6655554 23 36888888875433 22222334567899999
Q ss_pred cCCCEEEEEeCCCCeEEEEeCCCCC--eEEEec-CCCCceEEEEEEC
Q psy13635 273 VDNEKLYWCDAKTDKIEMIDFDGNN--RRELIN-ENLPHVFGISLLG 316 (357)
Q Consensus 273 ~~~~~lY~~d~~~~~I~~~~~dG~~--~~~i~~-~~~~~p~gia~~~ 316 (357)
+.+..||++....+.|...+.+... ...+.. .......++++..
T Consensus 277 ~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp 323 (402)
T 2aq5_A 277 PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMP 323 (402)
T ss_dssp TTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECC
T ss_pred CCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEec
Confidence 8888999888778889999886554 332321 1223456777764
No 171
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.52 E-value=0.00025 Score=65.82 Aligned_cols=244 Identities=10% Similarity=-0.047 Sum_probs=153.4
Q ss_pred EEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc-eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc---
Q psy13635 75 AIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG-SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK--- 150 (357)
Q Consensus 75 ~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~--- 150 (357)
.+++++....+.++...++.|...+++..... .....+...-....++++++.++.++++-..++.|...++....
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 35566544455555566778888887654210 00112222334578899987456666676678899999886541
Q ss_pred -----eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEe--cCCCCCceE
Q psy13635 151 -----RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLV--NTDLVEPRA 223 (357)
Q Consensus 151 -----~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~--~~~~~~P~g 223 (357)
...+.. --.....+++.+.+++++++....+.|...++......... .........
T Consensus 119 ~~~~~~~~~~~-----------------h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~ 181 (402)
T 2aq5_A 119 PLREPVITLEG-----------------HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYS 181 (402)
T ss_dssp CBCSCSEEEEC-----------------CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEE
T ss_pred ccCCceEEecC-----------------CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEE
Confidence 122211 11356778888776567767666788999998765544444 334456789
Q ss_pred EEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe-eCC-CCCceEEEEecCCCEEEEEe---CCCCeEEEEeCCCCCe
Q psy13635 224 ITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV-KDR-LGWPNGITLDVDNEKLYWCD---AKTDKIEMIDFDGNNR 298 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~-~~~-l~~P~giaid~~~~~lY~~d---~~~~~I~~~~~dG~~~ 298 (357)
++++|....|+.+... +.|...++........+ ... -..+..+++.+ +++++.+- ...+.|...+......
T Consensus 182 ~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 182 VDWSRDGALICTSCRD---KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp EEECTTSSCEEEEETT---SEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred EEECCCCCEEEEEecC---CcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCccccC
Confidence 9999875566665544 58888888765544443 222 22368899985 56666665 5678899999865432
Q ss_pred --EEEecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEeCccCce
Q psy13635 299 --RELINENLPHVFGISLL--GDYVYWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 299 --~~i~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~~~g~~ 339 (357)
.............+++. +..++++....+.|...+..+++.
T Consensus 258 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 258 PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 22222234456778877 467888887788888888766663
No 172
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.51 E-value=3.2e-05 Score=69.55 Aligned_cols=251 Identities=10% Similarity=0.105 Sum_probs=148.6
Q ss_pred eEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCcee
Q psy13635 42 QMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDG 121 (357)
Q Consensus 42 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~g 121 (357)
..++++... +.++|.++.......... .......+. ++.||+.. .++.|++++.+|.. .............
T Consensus 71 g~l~v~t~~-l~~~d~~g~~~~~~~~~~-~~~~~~~~~--~~~l~v~t-~~~~l~~~d~~g~~----~~~~~~~~~~~~~ 141 (330)
T 3hxj_A 71 GTIYFGSDK-VYAINPDGTEKWRFDTKK-AIVSDFTIF--EDILYVTS-MDGHLYAINTDGTE----KWRFKTKKAIYAT 141 (330)
T ss_dssp TEECCSSCE-EEEECCCGGGGGGSCC------CCEEEE--TTEEEEEC-TTSEEEEECTTSCE----EEEEECSSCCCSC
T ss_pred CcEEEecCc-EEEECCCCcEEEEEECCC-CcccCceEE--CCEEEEEe-cCCEEEEEcCCCCE----EEEEcCCCceeee
Confidence 345555555 888887542211111111 011112233 78887764 45689999988542 2222222233456
Q ss_pred EEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEE
Q psy13635 122 LAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIE 201 (357)
Q Consensus 122 lavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~ 201 (357)
+++|. .+.||+.. ..+.|.+++.+|......... ......+++| .++.||++. +.+.
T Consensus 142 ~~~~~-~g~l~vgt-~~~~l~~~d~~g~~~~~~~~~-----------------~~~~~~~~~d-~~g~l~v~t---~~l~ 198 (330)
T 3hxj_A 142 PIVSE-DGTIYVGS-NDNYLYAINPDGTEKWRFKTN-----------------DAITSAASIG-KDGTIYFGS---DKVY 198 (330)
T ss_dssp CEECT-TSCEEEEC-TTSEEEEECTTSCEEEEEECS-----------------SCCCSCCEEC-TTCCEEEES---SSEE
T ss_pred eEEcC-CCEEEEEc-CCCEEEEECCCCCEeEEEecC-----------------CCceeeeEEc-CCCEEEEEe---CEEE
Confidence 67774 67787765 357899999885543332211 1134556777 567888887 6789
Q ss_pred EEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEE
Q psy13635 202 VCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWC 281 (357)
Q Consensus 202 ~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~ 281 (357)
+++.+|+....... ....+.++++++ +|.||++... +.+.+.+.+|....... .....+..+++| .+++||++
T Consensus 199 ~~d~~g~~~~~~~~-~~~~~~~~~~~~-~g~l~v~t~~---~gl~~~~~~g~~~~~~~-~~~~~~~~~~~~-~~g~l~v~ 271 (330)
T 3hxj_A 199 AINPDGTEKWNFYA-GYWTVTRPAISE-DGTIYVTSLD---GHLYAINPDGTEKWRFK-TGKRIESSPVIG-NTDTIYFG 271 (330)
T ss_dssp EECTTSCEEEEECC-SSCCCSCCEECT-TSCEEEEETT---TEEEEECTTSCEEEEEE-CSSCCCSCCEEC-TTSCEEEE
T ss_pred EECCCCcEEEEEcc-CCcceeceEECC-CCeEEEEcCC---CeEEEECCCCCEeEEee-CCCCccccceEc-CCCeEEEe
Confidence 99877765544332 234577888986 4899998865 48888887776554443 222334556776 57899988
Q ss_pred eCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 282 DAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 282 d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
.. .+.+.+++.+|........ .......+..+ +|.||+.. ..|.+.....
T Consensus 272 t~-~ggl~~~d~~g~~~~~~~~-~~~~~~~~~~d~~g~l~~gt-~~G~~~~~~~ 322 (330)
T 3hxj_A 272 SY-DGHLYAINPDGTEKWNFET-GSWIIATPVIDENGTIYFGT-RNGKFYALFN 322 (330)
T ss_dssp CT-TCEEEEECTTSCEEEEEEC-SSCCCSCCEECTTCCEEEEC-TTSCEEEEEC
T ss_pred cC-CCCEEEECCCCcEEEEEEc-CCccccceEEcCCCEEEEEc-CCCeEEEEec
Confidence 64 4589999987765443322 22334556674 67888875 3456655544
No 173
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.51 E-value=4.8e-05 Score=76.45 Aligned_cols=286 Identities=9% Similarity=0.043 Sum_probs=157.3
Q ss_pred EEEEEeCCcEEEEEcCCCCcceEeccCCC---cEEEEEEEccCCEEEEEeCC--------CCeEEEEEcCCCCcceeEEE
Q psy13635 43 MLLFATSKDIRIANLSRPLKPVTIIKDLE---EGAAIDYYYKKSMVCWTDHG--------TEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 43 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~i~~d~~~~~ly~~d~~--------~~~I~~~~~~g~~~~~~~~~ 111 (357)
+++.+....|+..|+.++....+....-. .+..+++++++..|..+... .+.|+..++++.. ...
T Consensus 30 ~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~ 105 (723)
T 1xfd_A 30 FIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD----PQS 105 (723)
T ss_dssp BCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC----CEE
T ss_pred EEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc----eEe
Confidence 44333345688888877443333322211 37789999988888777432 2578888888764 222
Q ss_pred EeCCc---CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCc--ceeeeeccCcccccCCceEEEeCC
Q psy13635 112 ITNGL---ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQP--RAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 112 ~~~~~---~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p--~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
+.... ..+..+++.|.++.|.++.. +.|++.++++.....+...+.... .++.-.....+.+..+.++++.|.
T Consensus 106 l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD 183 (723)
T 1xfd_A 106 LDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD 183 (723)
T ss_dssp CCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT
T ss_pred ccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCC
Confidence 22211 12667889988888887764 689999988766555443211000 000000000000123467888877
Q ss_pred CCeEEEEeCCC---------------------------------CeEEEEEcCCCce-EEEecCC-----CCCceEEEEe
Q psy13635 187 ARNLYWTDTGT---------------------------------DRIEVCRLEGTHR-KVLVNTD-----LVEPRAITLS 227 (357)
Q Consensus 187 ~~~lY~td~~~---------------------------------~~I~~~~~~g~~~-~~~~~~~-----~~~P~giavd 227 (357)
++.|.++.... ..|...+.++... ..+.... ......++++
T Consensus 184 g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~S 263 (723)
T 1xfd_A 184 GTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA 263 (723)
T ss_dssp SSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES
T ss_pred CCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEe
Confidence 77777654221 1567777766543 2222110 1234568999
Q ss_pred CCCCEEEEE-eCCCCCCeEEEEecCCCceEEEeeCC-CCC----ceEEEEecCCCEEEEE-eCCCC------eEEEEe-C
Q psy13635 228 PAHGYLFWS-DWNEKRPKIERSLLNGGERVLLVKDR-LGW----PNGITLDVDNEKLYWC-DAKTD------KIEMID-F 293 (357)
Q Consensus 228 ~~~g~Ly~~-d~~~~~~~I~~~~~dg~~~~~~~~~~-l~~----P~giaid~~~~~lY~~-d~~~~------~I~~~~-~ 293 (357)
|.+..|+.. +.......|+..++++.....+.... -.+ +..+++.+++..|+++ ....+ .|+.++ .
T Consensus 264 pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~ 343 (723)
T 1xfd_A 264 TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQ 343 (723)
T ss_dssp SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSS
T ss_pred CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEecc
Confidence 875455333 33222247888888776655544221 111 2467888777778775 43333 688888 4
Q ss_pred CCCC---eEEEecCCCCceEEEEEE--CCEEEEEeCC----CCeEEEEeC
Q psy13635 294 DGNN---RRELINENLPHVFGISLL--GDYVYWTDWQ----RRSIDRVNK 334 (357)
Q Consensus 294 dG~~---~~~i~~~~~~~p~gia~~--~~~ly~td~~----~~~I~~~~~ 334 (357)
++.. .+.+..........+++. ++.||++... ...|+.++.
T Consensus 344 ~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 344 PNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp CCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred CCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 5554 333322112112224554 5788877643 345888876
No 174
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.51 E-value=0.00052 Score=64.19 Aligned_cols=253 Identities=9% Similarity=0.019 Sum_probs=155.4
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
....+..++|++... +..+...++.|...++.... ....+.........+++++ ++.+..+-+.++.|...++.+
T Consensus 107 h~~~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~~~---~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CSSCEEEEEECSSSS-EEEEEESSSCEEEEETTTCC---CCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTS
T ss_pred cCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc---EEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCC
Confidence 445678999998554 55566667888888887654 2334444445678899986 455666666778888888876
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeC
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSP 228 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~ 228 (357)
......+. .--.....+++.+.+..| ++....+.|...++..................+++++
T Consensus 182 ~~~~~~~~----------------~h~~~V~~v~~~p~~~~l-~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 182 FECIRTMH----------------GHDHNVSSVSIMPNGDHI-VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244 (410)
T ss_dssp SCEEECCC----------------CCSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred CceeEEEc----------------CCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC
Confidence 54322111 011245678888655544 4555667888888875443333333445677888887
Q ss_pred CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCC-------------------CEEEEEeCCCCeEE
Q psy13635 229 AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDN-------------------EKLYWCDAKTDKIE 289 (357)
Q Consensus 229 ~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~-------------------~~lY~~d~~~~~I~ 289 (357)
. |.++.+-... +.|...++........+...-.....+++.+.. +.+.++-...+.|.
T Consensus 245 ~-g~~l~s~s~D--~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~ 321 (410)
T 1vyh_C 245 D-GTLIASCSND--QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321 (410)
T ss_dssp T-SSEEEEEETT--SCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred C-CCEEEEEcCC--CeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEE
Confidence 6 4444444332 477777776554444443333445677776431 45566666778898
Q ss_pred EEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecc
Q psy13635 290 MIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 290 ~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~ 346 (357)
..+.........+........++++. ++...++-...+.|...+..+++....+...
T Consensus 322 iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h 379 (410)
T 1vyh_C 322 MWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379 (410)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECC
T ss_pred EEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 88876544333333344456778876 3455555556678888887667666655443
No 175
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.50 E-value=6.9e-05 Score=70.63 Aligned_cols=241 Identities=9% Similarity=0.081 Sum_probs=152.7
Q ss_pred ecCCCCeEEEEEe--CCcEEEEEcCC----------CCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCC
Q psy13635 36 SHHVAAQMLLFAT--SKDIRIANLSR----------PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGN 103 (357)
Q Consensus 36 ~~~~~~~~l~~~~--~~~i~~~~~~~----------~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~ 103 (357)
..++..+.++++. ...|+..++.. .............+.++++++.+..++.+...++.|...++...
T Consensus 135 ~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 214 (430)
T 2xyi_A 135 RYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINAT 214 (430)
T ss_dssp EEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSC
T ss_pred EECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCC
Confidence 3343334444443 44688888864 12233333445567889999876646667777888998888763
Q ss_pred Cccee----EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC----ceEEEEecCCCCcceeeeeccCcccc
Q psy13635 104 NVGSK----HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK----KRKVLYWEDIDQPRAIASYKLPTIEV 175 (357)
Q Consensus 104 ~~~~~----~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~----~~~~~~~~~~~~p~~i~~~~~~~~~~ 175 (357)
..... .......-..+..+++.+.++.++++....+.|...++... ....+.. .-
T Consensus 215 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~-----------------~~ 277 (430)
T 2xyi_A 215 PKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA-----------------HT 277 (430)
T ss_dssp CBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC-----------------CS
T ss_pred CCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec-----------------CC
Confidence 21000 12233334567889999878889999888999999998754 1222211 11
Q ss_pred cCCceEEEeCCCCeEEEEeCCCCeEEEEEcCC-CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC-
Q psy13635 176 EHPDGVAVDWVARNLYWTDTGTDRIEVCRLEG-THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG- 253 (357)
Q Consensus 176 ~~p~glavD~~~~~lY~td~~~~~I~~~~~~g-~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~- 253 (357)
..+..+++.+.+..++++....+.|...++.. ................++++|.+..++.+.... +.|...++...
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d--~~i~iwd~~~~~ 355 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD--RRLHVWDLSKIG 355 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT--SCCEEEEGGGTT
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC--CcEEEEeCCCCc
Confidence 25678899887878888888888999999875 322222223345688999999766677766553 46666665531
Q ss_pred -------------ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 254 -------------ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 254 -------------~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
.........-..+..+++.+.+..++++-...+.|...+++.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 122222223446899999866554777777778777777653
No 176
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.50 E-value=0.00073 Score=62.72 Aligned_cols=239 Identities=11% Similarity=-0.014 Sum_probs=154.2
Q ss_pred EEeecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 33 YALSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
.+++-++...+|+.+. ...|+..|+..................++++ .+ ++.+...++.|...++.... .....
T Consensus 138 ~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~--~~~~~ 212 (401)
T 4aez_A 138 ASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RH-VLSSGSRSGAIHHHDVRIAN--HQIGT 212 (401)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSS--CEEEE
T ss_pred EEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CC-EEEEEcCCCCEEEEecccCc--ceeeE
Confidence 3444455556666665 4568899987755455555556677888885 33 55555667889988887433 22344
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEE
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLY 191 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY 191 (357)
+......+.++++.+ .+.++++-...+.|...++........... .-.....+++.+.++.++
T Consensus 213 ~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~----------------~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 213 LQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTN----------------HNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp EECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECC----------------CSSCCCEEEECTTSTTEE
T ss_pred EcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecC----------------CcceEEEEEECCCCCCEE
Confidence 444456788999997 455555555678999999876544333211 113567889988788888
Q ss_pred EEeC--CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEE--eeCCCCCce
Q psy13635 192 WTDT--GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLL--VKDRLGWPN 267 (357)
Q Consensus 192 ~td~--~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~--~~~~l~~P~ 267 (357)
.+.. ..+.|...++.......... .-.....++++|....|+.+.... .+.|...++........ +........
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~-dg~i~v~~~~~~~~~~~~~~~~h~~~v~ 353 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFP-DNNLSIWSYSSSGLTKQVDIPAHDTRVL 353 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTT-TCEEEEEEEETTEEEEEEEEECCSSCCC
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecC-CCcEEEEecCCccceeEEEecCCCCCEE
Confidence 8865 46789999987544433332 235688999999866777665322 25888888776444333 234445678
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCC
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~ 296 (357)
++++.+.+..| ++-...+.|...+....
T Consensus 354 ~~~~s~dg~~l-~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 354 YSALSPDGRIL-STAASDENLKFWRVYDG 381 (401)
T ss_dssp EEEECTTSSEE-EEECTTSEEEEEECCC-
T ss_pred EEEECCCCCEE-EEEeCCCcEEEEECCCC
Confidence 89998655444 45556778888887543
No 177
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.50 E-value=0.00042 Score=63.70 Aligned_cols=282 Identities=7% Similarity=-0.006 Sum_probs=159.0
Q ss_pred eecCC-CCeEEEEEe-CCcEEEEEcCCCCcceEec-------------cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEE
Q psy13635 35 LSHHV-AAQMLLFAT-SKDIRIANLSRPLKPVTII-------------KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCT 99 (357)
Q Consensus 35 ~~~~~-~~~~l~~~~-~~~i~~~~~~~~~~~~~~~-------------~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~ 99 (357)
+.-++ ...+|+.+. ...|+..++.......... .......++++.+.++.++.+-..++.|...+
T Consensus 49 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 128 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWD 128 (408)
T ss_dssp EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEee
Confidence 33344 445555555 5568889987643222211 24557889999986666667766778899999
Q ss_pred cCCCCcceeEEEEeCCcCCceeEEEEcCCC--eEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccC
Q psy13635 100 FDGNNVGSKHNVITNGLITPDGLAIDWLTE--KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEH 177 (357)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~p~glavd~~~~--~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~ 177 (357)
+.... ...... .......+++.+.+. .++++....+.|...++........... .-..
T Consensus 129 ~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~----------------~~~~ 188 (408)
T 4a11_B 129 TNTLQ---TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG----------------HRQE 188 (408)
T ss_dssp TTTTE---EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC----------------CCSC
T ss_pred CCCCc---cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC----------------CCCc
Confidence 88763 122222 233456677765432 3556666678888888865433222211 1124
Q ss_pred CceEEEeCCCCeEEEEeCCCCeEEEEEcCCCc-eEEEe---------------cCCCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 178 PDGVAVDWVARNLYWTDTGTDRIEVCRLEGTH-RKVLV---------------NTDLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~~~~I~~~~~~g~~-~~~~~---------------~~~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
..++++.+.+..++++....+.|...++.... ..... .........++++|....|+.+...
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-- 266 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD-- 266 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT--
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC--
Confidence 56788887777777777667788888876432 11111 1123457889999876666666554
Q ss_pred CCeEEEEecCCCceEEEeeCC------CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE
Q psy13635 242 RPKIERSLLNGGERVLLVKDR------LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL 315 (357)
Q Consensus 242 ~~~I~~~~~dg~~~~~~~~~~------l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~ 315 (357)
+.|...++............ .........+ ..+.+.++ ...+.|...+.........+........++++.
T Consensus 267 -g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s 343 (408)
T 4a11_B 267 -NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCG-CSSEFVFV-PYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQ 343 (408)
T ss_dssp -SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCS-SSSCEEEE-EETTEEEEEETTTCCEEEEECCCSSCEEEEEEE
T ss_pred -CeEEEEECCCCccceeccccccccccccceeEEecC-CCceEEEE-ecCCEEEEEECcCCcceeeeccCCCeEEEEEEc
Confidence 57888887654332221110 0111122222 22233332 234678888875544444444444566788887
Q ss_pred C-CEEEEEeCCCCeEEEEeCccCceeE
Q psy13635 316 G-DYVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 316 ~-~~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
. +.++++-...+.|...+..+++...
T Consensus 344 ~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 344 SNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp TTTTEEEEEETTSCEEEEEECC-----
T ss_pred CCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 3 4555555566788777765555443
No 178
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.47 E-value=0.0014 Score=64.63 Aligned_cols=278 Identities=10% Similarity=0.007 Sum_probs=157.5
Q ss_pred ecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC
Q psy13635 36 SHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 36 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
+-++....|+++..+.++..++..................++|+|.+..| .+-..++.|+..++..... .....+...
T Consensus 25 ~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l-asg~~d~~v~lWd~~~~~~-~~~~~~~~~ 102 (611)
T 1nr0_A 25 GNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYC-ASGDVHGNVRIWDTTQTTH-ILKTTIPVF 102 (611)
T ss_dssp EECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEESSSTTC-CEEEEEECS
T ss_pred eeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEE-EEEeCCCCEEEeECCCCcc-eeeEeeccc
Confidence 33555667888888888888987545555555566678999999865544 4555567888888753321 112223323
Q ss_pred cCCceeEEEEcCCCeEEEEeCCC---CEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSET---NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW 192 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~---~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~ 192 (357)
-.....+++++.++.|..+..+. ++|...+. |.....+ ...-.....+++.|.+..+++
T Consensus 103 ~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l-----------------~gh~~~v~~v~f~p~~~~~l~ 164 (611)
T 1nr0_A 103 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNL-----------------TGQARAMNSVDFKPSRPFRII 164 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCC-----------------CCCSSCEEEEEECSSSSCEEE
T ss_pred CCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCccee-----------------cCCCCCceEEEECCCCCeEEE
Confidence 34678899998877777665443 24544432 2111111 111124567888876666666
Q ss_pred EeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee-------CCCCC
Q psy13635 193 TDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-------DRLGW 265 (357)
Q Consensus 193 td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-------~~l~~ 265 (357)
+....+.|...+...................++++|. |.++.+-... +.|...+.........+. ..-..
T Consensus 165 s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd-g~~las~s~D--~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~ 241 (611)
T 1nr0_A 165 SGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD-GSLFASTGGD--GTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 241 (611)
T ss_dssp EEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTT-SSEEEEEETT--SCEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred EEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCC-CCEEEEEECC--CcEEEEECCCCcEeeeeccccccccccCCC
Confidence 7776778888876544333333344456889999987 4444444332 477777765443333331 12345
Q ss_pred ceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC-eEEEecCC--CCceEEEEEECCEEEEEeCCCCeEEEEeCccCc
Q psy13635 266 PNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN-RRELINEN--LPHVFGISLLGDYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 266 P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~-~~~i~~~~--~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~ 338 (357)
..++++.+.+..| .+-...+.|...+..... ...+.... .....++..++.. .++-...+.|...+..+++
T Consensus 242 V~~v~~spdg~~l-~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~s~d~~i~~~~~~~~~ 315 (611)
T 1nr0_A 242 VFGLTWSPDGTKI-ASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA-LVSISANGFINFVNPELGS 315 (611)
T ss_dssp EEEEEECTTSSEE-EEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC-EEEEETTCCEEEEETTTTE
T ss_pred EEEEEECCCCCEE-EEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE-EEEEeCCCcEEEEeCCCCC
Confidence 6889998655444 555566788888876433 22222111 1123444443333 3333344555555554443
No 179
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.46 E-value=5.7e-05 Score=69.48 Aligned_cols=237 Identities=5% Similarity=-0.050 Sum_probs=142.2
Q ss_pred CCCCeEEEEEeCCcEEEEEcCCCCcc---eE-eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe
Q psy13635 38 HVAAQMLLFATSKDIRIANLSRPLKP---VT-IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 38 ~~~~~~l~~~~~~~i~~~~~~~~~~~---~~-~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
+++..++.-+....|+..|+...... .. ....-....++++.+.+..|. +-..++.|+..++.... ....+.
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-sgs~dg~v~iwd~~~~~---~~~~~~ 178 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAV-SGGKDFSVKVWDLSQKA---VLKSYN 178 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEE-EEETTSCEEEEETTTTE---EEEEEC
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEE-EEeCCCeEEEEECCCCc---EEEEEc
Confidence 44555665555667888787653211 11 112344678999998665554 54556788888887653 233343
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT 193 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t 193 (357)
..-.....+++.+.++.++.+...++.|...++........... ...-..+..+++.|.++.++.+
T Consensus 179 ~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~--------------~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 179 AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF--------------CASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC--------------TTCCSCEEEEEECTTSTTEEEE
T ss_pred CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee--------------ccccccccchhhhhcccceEEE
Confidence 34456788999877777888877788888887754322111100 1111246678888877888877
Q ss_pred eCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEec
Q psy13635 194 DTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDV 273 (357)
Q Consensus 194 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~ 273 (357)
....+.|...++..................++++|..+++..+-... +.|...+.+........ ..-....++++.|
T Consensus 245 g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D--~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP 321 (357)
T 4g56_B 245 GDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED--CTVAVLDADFSEVFRDL-SHRDFVTGVAWSP 321 (357)
T ss_dssp EESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT--SCEEEECTTSCEEEEEC-CCSSCEEEEEECS
T ss_pred eecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC--CEEEEEECCCCcEeEEC-CCCCCEEEEEEeC
Confidence 76677899888775443333333445678999998765554443332 57877887765444333 2234568899987
Q ss_pred CCCEEEEEeCCCCeEEEEeCCC
Q psy13635 274 DNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 274 ~~~~lY~~d~~~~~I~~~~~dG 295 (357)
.++.++.+-...+.|..-++..
T Consensus 322 ~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 322 LDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp SSTTEEEEEETTSCEEEEECC-
T ss_pred CCCCEEEEEcCCCeEEEEECCC
Confidence 5666666665667777776643
No 180
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.46 E-value=0.00083 Score=63.46 Aligned_cols=196 Identities=13% Similarity=0.031 Sum_probs=121.1
Q ss_pred CceeEEEEcCCCeEEEEeCCCCEEEEEEcC--CC-ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 118 TPDGLAIDWLTEKLYWTDSETNKLEVSSLD--GK-KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 118 ~p~glavd~~~~~ly~td~~~~~I~~~~~~--g~-~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
.+.++++++.++.|+++....+.|...++. +. ....+..... -..+.++++++.+..|+.++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~---------------~~~v~~~~~sp~~~~l~~~~ 168 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF---------------SKRPNAISIAEDDTTVIIAD 168 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC---------------SSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC---------------CCCceEEEEcCCCCEEEEEe
Confidence 467899998777777877778899998877 43 3333321111 12567889998777777766
Q ss_pred CCCCeEEEEEcCCCceEE----EecCCCCCceEEEEeCC---CCEEEEEeCCCCCCeEEEEecCCCceE-EEeeCCCCCc
Q psy13635 195 TGTDRIEVCRLEGTHRKV----LVNTDLVEPRAITLSPA---HGYLFWSDWNEKRPKIERSLLNGGERV-LLVKDRLGWP 266 (357)
Q Consensus 195 ~~~~~I~~~~~~g~~~~~----~~~~~~~~P~giavd~~---~g~Ly~~d~~~~~~~I~~~~~dg~~~~-~~~~~~l~~P 266 (357)
. .+.|...++....... ...........++++|. +..|+.+... +.|...++...... .+....-..+
T Consensus 169 ~-~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 169 K-FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD---EHIKISHYPQCFIVDKWLFGHKHFV 244 (450)
T ss_dssp T-TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT---SCEEEEEESCTTCEEEECCCCSSCE
T ss_pred C-CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC---CcEEEEECCCCceeeeeecCCCCce
Confidence 5 5678888875433211 11123356789999986 4455555544 47777777654443 3333344567
Q ss_pred eEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecC-------------------------CCCceEEEEEE--CCEE
Q psy13635 267 NGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINE-------------------------NLPHVFGISLL--GDYV 319 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~-------------------------~~~~p~gia~~--~~~l 319 (357)
..+++. .+..|+.+ ...+.|...+.........+.. .-....++++. +..+
T Consensus 245 ~~~~~s-d~~~l~s~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 245 SSICCG-KDYLLLSA-GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEEEEC-STTEEEEE-ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred EEEEEC-CCCEEEEE-eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 899997 55555544 4677899999865443222210 01124456665 4678
Q ss_pred EEEeCCCCeEEEEeC
Q psy13635 320 YWTDWQRRSIDRVNK 334 (357)
Q Consensus 320 y~td~~~~~I~~~~~ 334 (357)
+.+....+.|...+.
T Consensus 323 ~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 323 AFFVEATKCIIILEM 337 (450)
T ss_dssp EEEETTCSEEEEEEE
T ss_pred EEEECCCCeEEEEEe
Confidence 888756677776665
No 181
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.44 E-value=0.00015 Score=65.14 Aligned_cols=258 Identities=9% Similarity=0.026 Sum_probs=144.6
Q ss_pred CCeEEEEEe-CCcEEEEEcCCCC---cceEeccCCCcEEEEEEEccCC-EEEEEeCCCCeEEEEEc-CCCCcceeEEEEe
Q psy13635 40 AAQMLLFAT-SKDIRIANLSRPL---KPVTIIKDLEEGAAIDYYYKKS-MVCWTDHGTEMISCCTF-DGNNVGSKHNVIT 113 (357)
Q Consensus 40 ~~~~l~~~~-~~~i~~~~~~~~~---~~~~~~~~~~~~~~i~~d~~~~-~ly~~d~~~~~I~~~~~-~g~~~~~~~~~~~ 113 (357)
...+|+.+. ...|+..++.... ...........+..+++.+.+. .|+.+. .++.|+..++ ++.. ...+.
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~----~~~~~ 96 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT-VQGEILKVDLIGSPS----FQALT 96 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-TTSCEEEECSSSSSS----EEECB
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc-CCCeEEEEEeccCCc----eEecc
Confidence 344555554 4568888876643 1333445566788999998766 565554 5678999998 7664 34444
Q ss_pred C--CcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC---CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 114 N--GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG---KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 114 ~--~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g---~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
. .-.....+++.+ +.++++-...+.|...++.. ..... ....+.. ...-..+.++++++.
T Consensus 97 ~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~----------~~~~~~v~~~~~~~~-- 161 (342)
T 1yfq_A 97 NNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAV-KNLNSNN----------TKVKNKIFTMDTNSS-- 161 (342)
T ss_dssp SCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEE-EESCSSS----------SSSCCCEEEEEECSS--
T ss_pred ccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccc-cCCeeeE----------EeeCCceEEEEecCC--
Confidence 4 445678899997 45555555678888887653 00000 0000000 001124556666633
Q ss_pred eEEEEeCCCCeEEEEEcCC-Cc--eEEEecCCCCCceEEEEeC-CCCEEEEEeCCCCCCeEEEEecCCC------ceEEE
Q psy13635 189 NLYWTDTGTDRIEVCRLEG-TH--RKVLVNTDLVEPRAITLSP-AHGYLFWSDWNEKRPKIERSLLNGG------ERVLL 258 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~g-~~--~~~~~~~~~~~P~giavd~-~~g~Ly~~d~~~~~~~I~~~~~dg~------~~~~~ 258 (357)
.++.+ ...+.|...++.. .. ........-..+..++++| ....++.+... +.|...+++.. .....
T Consensus 162 ~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 162 RLIVG-MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID---GRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp EEEEE-ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT---SEEEEEECCTTCCSTTCTTCEE
T ss_pred cEEEE-eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecC---CcEEEEEEcCCCccccccccee
Confidence 34444 4456888888776 22 2223223345678999998 65555555543 46666555443 22223
Q ss_pred eeCCC---------CCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCC-CCceEEEEEECCEEEEE
Q psy13635 259 VKDRL---------GWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINEN-LPHVFGISLLGDYVYWT 322 (357)
Q Consensus 259 ~~~~l---------~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~-~~~p~gia~~~~~ly~t 322 (357)
+.... .....+++.+.+..|+.+ ...+.|...+.........+... .....+++.++..|..+
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~ 310 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA-GSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLA 310 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEE-ETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEE
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEe-cCCceEEEEcCccHhHhhhhhcccCCCceEecCCCCeEEEE
Confidence 32221 266889998655555544 45678999998754443333333 33446677223344433
No 182
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.44 E-value=0.00036 Score=73.45 Aligned_cols=154 Identities=13% Similarity=0.083 Sum_probs=96.7
Q ss_pred ceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCC----------CCCceEEEEe-CCCCEEEEEeCCCCCCeEEE
Q psy13635 179 DGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTD----------LVEPRAITLS-PAHGYLFWSDWNEKRPKIER 247 (357)
Q Consensus 179 ~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~----------~~~P~giavd-~~~g~Ly~~d~~~~~~~I~~ 247 (357)
...++.+.++.|.++. .+.|...++.+.....+.... ...+..++++ |.+..|.++.. +.|+.
T Consensus 248 ~~~~~SpDG~~la~~~--~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~----~~i~~ 321 (1045)
T 1k32_A 248 YPRHLNTDGRRILFSK--GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSR----GQAFI 321 (1045)
T ss_dssp CEEEEEESSSCEEEEE--TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEET----TEEEE
T ss_pred ceeeEcCCCCEEEEEe--CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEEc----CEEEE
Confidence 3456776666676663 457888877554433221100 1147899999 98667777762 48888
Q ss_pred EecCCCceEEEeeCCCC-CceEEEEecCCCEEEEEeCCCCeEE-EEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEe
Q psy13635 248 SLLNGGERVLLVKDRLG-WPNGITLDVDNEKLYWCDAKTDKIE-MIDFDGNNRRELINENLPHVFGISLL--GDYVYWTD 323 (357)
Q Consensus 248 ~~~dg~~~~~~~~~~l~-~P~giaid~~~~~lY~~d~~~~~I~-~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td 323 (357)
.+.++.....+. .... .+..+++. ++..|+++.. ...++ ..+.++.....+. .....+..+++. +..|+++.
T Consensus 322 ~~~~~~~~~~~~-~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 322 QDVSGTYVLKVP-EPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVAN 397 (1045)
T ss_dssp ECTTSSBEEECS-CCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEE
T ss_pred EcCCCCceEEcc-CCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEEC
Confidence 888876554432 2222 45566665 5556766655 56888 8888877665554 344566777775 45666665
Q ss_pred CCCCeEEEEeCccCceeEEE
Q psy13635 324 WQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 324 ~~~~~I~~~~~~~g~~~~~i 343 (357)
. .+.|+.++..+|+...++
T Consensus 398 ~-~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 398 D-RFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp T-TSEEEEEETTTCCEEEEE
T ss_pred C-CCeEEEEECCCCceEEec
Confidence 3 468888888777766554
No 183
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.43 E-value=0.00017 Score=75.93 Aligned_cols=268 Identities=11% Similarity=0.009 Sum_probs=165.3
Q ss_pred CCCeEEEEEeCCcEEEEEcCCCCcceEeccCCC-cEEEEEEEccCCEEEEEeCCCCeEE-EEEcCCCCcceeEEEEeCCc
Q psy13635 39 VAAQMLLFATSKDIRIANLSRPLKPVTIIKDLE-EGAAIDYYYKKSMVCWTDHGTEMIS-CCTFDGNNVGSKHNVITNGL 116 (357)
Q Consensus 39 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~i~~d~~~~~ly~~d~~~~~I~-~~~~~g~~~~~~~~~~~~~~ 116 (357)
+....+++.....++.+++.+. ....+..... .+..+++. ++..|+++.. ...|+ ..++++.. ...+....
T Consensus 306 pdG~~la~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~----~~~l~~~~ 378 (1045)
T 1k32_A 306 LDGDLIAFVSRGQAFIQDVSGT-YVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGK----AEKFEENL 378 (1045)
T ss_dssp CGGGCEEEEETTEEEEECTTSS-BEEECSCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCC----EEECCCCC
T ss_pred CCCCEEEEEEcCEEEEEcCCCC-ceEEccCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCC----ceEecCCc
Confidence 4445577777778888888763 3333333333 56777787 6667776655 56788 78887764 33333344
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
..+..+++.+.++.|+++.. .+.|...++.+.....+.... .....++++.+.++.|.++...
T Consensus 379 ~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~~~~~~~~~----------------~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVAND-RFEIMTVDLETGKPTVIERSR----------------EAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEEEEECS----------------SSCCCCEEECTTSCEEEEEEEE
T ss_pred cceeeeEECCCCCEEEEECC-CCeEEEEECCCCceEEeccCC----------------CCCccceEECCCCCeEEEEecC
Confidence 56789999988888877664 568999999776555544221 1134678888888888776542
Q ss_pred C---------CeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC---------------CCeEEEEec--
Q psy13635 197 T---------DRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK---------------RPKIERSLL-- 250 (357)
Q Consensus 197 ~---------~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~---------------~~~I~~~~~-- 250 (357)
. ..|...+.++.....+. .....+..++++|.+.+||++..... ..+++.+.+
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g~~~~l~-~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIP 520 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTTEEEECS-CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESST
T ss_pred ccccccCCCCCeEEEEECCCCcEEEee-CCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCC
Confidence 2 48999998876544333 34456788999998888998875321 011222211
Q ss_pred ----------------------CCCc-eEEEeeCCCCCceEEEEecCCCEEEEE-------------eCCCCeEEEEeCC
Q psy13635 251 ----------------------NGGE-RVLLVKDRLGWPNGITLDVDNEKLYWC-------------DAKTDKIEMIDFD 294 (357)
Q Consensus 251 ----------------------dg~~-~~~~~~~~l~~P~giaid~~~~~lY~~-------------d~~~~~I~~~~~d 294 (357)
+|.. +...+...-....++++.+ ++.++++ ......|+.+++.
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~-dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~ 599 (1045)
T 1k32_A 521 GSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLE-SSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVK 599 (1045)
T ss_dssp TCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECS-SEEEEEECCCCCSHHHHHHCCCCCEEEEEEETT
T ss_pred CCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcC-CCeEEEEecccCcccccccccCCCceEEEEECC
Confidence 1110 1111111112346788874 5565553 2345689999987
Q ss_pred CCCeEEEecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEeCccCc
Q psy13635 295 GNNRRELINENLPHVFGISLL--GDYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 295 G~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~~~g~ 338 (357)
+...+.+. ..+.++++. +..|+++... .|..++..+++
T Consensus 600 ~~~~~~l~----~~v~~~~~S~DG~~l~~~~~~--~i~~~d~~~~~ 639 (1045)
T 1k32_A 600 TRKVTEVK----NNLTDLRLSADRKTVMVRKDD--GKIYTFPLEKP 639 (1045)
T ss_dssp TCCEEEEE----EEEEEEEECTTSCEEEEEETT--SCEEEEESSCT
T ss_pred CCcEEEee----cCcceEEECCCCCEEEEEcCC--cEEEEeCccCc
Confidence 76665444 345666665 5688888644 67777765666
No 184
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.42 E-value=0.00094 Score=60.26 Aligned_cols=259 Identities=9% Similarity=-0.015 Sum_probs=153.7
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
..-....++++++.+..|+.+ ..++.|...++.... ....+...-....++++++.++ .+++-..++.|...++.
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSC-SKDSSASVWYSLNGE---RLGTLDGHTGTIWSIDVDCFTK-YCVTGSADYSIKLWDVS 104 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEE-ESSSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSS-EEEEEETTTEEEEEETT
T ss_pred EeeceEEEEEEcCCCCEEEEE-eCCCEEEEEeCCCch---hhhhhhhcCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECC
Confidence 344568889999865555544 456778888877653 2334444445678899987554 44555567899999987
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC----CCeEEEEEcCCCc------------eE
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG----TDRIEVCRLEGTH------------RK 211 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~----~~~I~~~~~~g~~------------~~ 211 (357)
........... ..+..+++.+.+..++.+... .+.|...++.... ..
T Consensus 105 ~~~~~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 105 NGQCVATWKSP-----------------VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp TCCEEEEEECS-----------------SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred CCcEEEEeecC-----------------CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 65544333211 246778888776666655443 1567666654321 11
Q ss_pred EE-ecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC-CceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEE
Q psy13635 212 VL-VNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG-GERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIE 289 (357)
Q Consensus 212 ~~-~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg-~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~ 289 (357)
.+ ..........++++|....|+.+... +.|...++.. ......+...-....++++++.+..|+.+ ...+.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~ 243 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWSTKGKYIIAGHKD---GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITS-SRDTNSF 243 (369)
T ss_dssp EEECCTTCCCEEEEEECGGGCEEEEEETT---SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSEEE
T ss_pred eccCCcCccceeEEEEcCCCCEEEEEcCC---CEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEe-cCCceEE
Confidence 11 11122367889999876666666554 5888888876 34444444444567899998665555544 4567899
Q ss_pred EEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCCCC-------------eEEEEeCccCceeEEEecccCCceee
Q psy13635 290 MIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQRR-------------SIDRVNKITGNDREVIIERSCTGVTR 353 (357)
Q Consensus 290 ~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~~-------------~I~~~~~~~g~~~~~i~~~l~~p~~i 353 (357)
..+........... .-.....+++. +..++......+ .+...+..+++....+.........+
T Consensus 244 v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~ 321 (369)
T 3zwl_B 244 LVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTV 321 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEE
Confidence 99986554433332 23344555554 345555443322 56666665666655554443333333
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.40 E-value=2.5e-05 Score=71.97 Aligned_cols=253 Identities=10% Similarity=-0.009 Sum_probs=138.2
Q ss_pred EEEEEEccCCEEEEEeCC--CCeEEEEEcCCCCcceeEEEEeCCcCCc-eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 74 AAIDYYYKKSMVCWTDHG--TEMISCCTFDGNNVGSKHNVITNGLITP-DGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 74 ~~i~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~p-~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
..+++++++..|+++... ...|+.+++++.. ...+..+.... .++++.+.++.|+++... +.|+++++++..
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~~ 113 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ----AVQLTEGKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLETLE 113 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE----EEECCCSSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTTCC
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCc----EEEeecCCCCccccceECCCCCEEEEEEcC-CcEEEEECCCCC
Confidence 345678888887766443 3478888888763 33333332222 236788888888777653 479999988776
Q ss_pred eEEEEecCCC-Ccc--eeeeeccCcccccCCce-----EEEeCCCCeEEEEe----CCCCeEEEEEcCCCceEEEecCCC
Q psy13635 151 RKVLYWEDID-QPR--AIASYKLPTIEVEHPDG-----VAVDWVARNLYWTD----TGTDRIEVCRLEGTHRKVLVNTDL 218 (357)
Q Consensus 151 ~~~~~~~~~~-~p~--~i~~~~~~~~~~~~p~g-----lavD~~~~~lY~td----~~~~~I~~~~~~g~~~~~~~~~~~ 218 (357)
.+.+...... .|. .++. ... ....+ .++.+.++.+++.. .....|+..++++.....+.. ..
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~----~~~-~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~ 187 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVAN----SDC-TKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DT 187 (396)
T ss_dssp EEEEEECCTTEEEEEEEEEC----TTS-SEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ES
T ss_pred cEEEEecccccCCCCCEEEe----ccC-CccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CC
Confidence 5555431110 000 0000 000 00000 01112222333222 233477888877655544443 33
Q ss_pred CCceEEEEeC-CCCEEEEEeCCCC---CCeEEEEecCCCceEEEeeCC-CCCceEEEEecCCCEEEEEeC--CCCe--EE
Q psy13635 219 VEPRAITLSP-AHGYLFWSDWNEK---RPKIERSLLNGGERVLLVKDR-LGWPNGITLDVDNEKLYWCDA--KTDK--IE 289 (357)
Q Consensus 219 ~~P~giavd~-~~g~Ly~~d~~~~---~~~I~~~~~dg~~~~~~~~~~-l~~P~giaid~~~~~lY~~d~--~~~~--I~ 289 (357)
.....++++| .+++|+++..... ..+|+.++.++.....+.... ...+..+++.+++.+|+++.. +... |+
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 4567889998 5556777654321 148999999887666554321 224567889877777776632 3334 99
Q ss_pred EEeCCCCCeEEEecCCCCceEEEEE---ECCEEEEEe---------------CCCCeEEEEeCccCcee
Q psy13635 290 MIDFDGNNRRELINENLPHVFGISL---LGDYVYWTD---------------WQRRSIDRVNKITGNDR 340 (357)
Q Consensus 290 ~~~~dG~~~~~i~~~~~~~p~gia~---~~~~ly~td---------------~~~~~I~~~~~~~g~~~ 340 (357)
.+++++...+.+... .... +++ ++..++.+. .....|+.++..+|+..
T Consensus 268 ~~d~~~g~~~~l~~~--~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (396)
T 3c5m_A 268 KANPETLENEEVMVM--PPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ 333 (396)
T ss_dssp EECTTTCCEEEEEEC--CSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC
T ss_pred EEECCCCCeEEeeeC--CCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE
Confidence 999876655544321 1111 444 334444332 13467889988656543
No 186
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.39 E-value=0.00077 Score=61.77 Aligned_cols=291 Identities=9% Similarity=-0.018 Sum_probs=158.8
Q ss_pred EEeecCCCCeEEEEEeC-------CcEEEEEcCCCCc----ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcC
Q psy13635 33 YALSHHVAAQMLLFATS-------KDIRIANLSRPLK----PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD 101 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~-------~~i~~~~~~~~~~----~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~ 101 (357)
.+++-++...+|+-+.. ..++..+...... ............+++|.+. +.+..+. .++.|+..++.
T Consensus 46 ~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d-~~~l~~s-~dg~v~lWd~~ 123 (357)
T 4g56_B 46 GAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSE-KGILVAS-DSGAVELWEIL 123 (357)
T ss_dssp EEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETT-TEEEEEE-TTSCEEEC---
T ss_pred EEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCC-CCEEEEE-CCCEEEEeecc
Confidence 34444555556655553 2356565533211 1112233445789999985 5655544 45677766665
Q ss_pred CCCcceeEE-EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCce
Q psy13635 102 GNNVGSKHN-VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDG 180 (357)
Q Consensus 102 g~~~~~~~~-~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~g 180 (357)
......... .....-.....+++.+.++ ..++-...+.|...++........+.. .-.....
T Consensus 124 ~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~~~~~~~----------------h~~~v~~ 186 (357)
T 4g56_B 124 EKESLLVNKFAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAVLKSYNA----------------HSSEVNC 186 (357)
T ss_dssp -----CCCCEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEEEEEECC----------------CSSCEEE
T ss_pred ccceeEEEeeccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcC----------------CCCCEEE
Confidence 432110011 1112234568899987544 445555678899888875544333211 1124567
Q ss_pred EEEeCCCCeEEEEeCCCCeEEEEEcCCCceE-EEe-cCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEE
Q psy13635 181 VAVDWVARNLYWTDTGTDRIEVCRLEGTHRK-VLV-NTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLL 258 (357)
Q Consensus 181 lavD~~~~~lY~td~~~~~I~~~~~~g~~~~-~~~-~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~ 258 (357)
+++.+.++.++++....+.|...++...... .+. ......+..++++|.++.++.+-... +.|...++........
T Consensus 187 v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d--~~i~~wd~~~~~~~~~ 264 (357)
T 4g56_B 187 VAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET--GNVSLVNIKNPDSAQT 264 (357)
T ss_dssp EEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS--SCEEEEESSCGGGCEE
T ss_pred EEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc--cceeEEECCCCcEeEE
Confidence 8887767667777777778888877643322 221 11234578899998877666554332 4788888765544444
Q ss_pred eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeCCCCeEEEEeC-c
Q psy13635 259 VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDWQRRSIDRVNK-I 335 (357)
Q Consensus 259 ~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~~~~~I~~~~~-~ 335 (357)
+........++++.+.++++..+-...+.|...+.+........ ..-....++++. ++.++.+-...++|..-+. .
T Consensus 265 ~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 265 SAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp ECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 43334456889998766666666556678988888765443333 234456788875 4556666666677766654 2
Q ss_pred cCceeEEEec
Q psy13635 336 TGNDREVIIE 345 (357)
Q Consensus 336 ~g~~~~~i~~ 345 (357)
.++...++..
T Consensus 344 ~~~~~~~i~~ 353 (357)
T 4g56_B 344 EGRTENLIAT 353 (357)
T ss_dssp ----------
T ss_pred CCccccccCC
Confidence 4555555543
No 187
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.38 E-value=0.0013 Score=60.00 Aligned_cols=242 Identities=8% Similarity=-0.041 Sum_probs=150.0
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE-EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN-VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
....+++|.++ +.|. +-..++.|+..+++......... .....-.....+++.+.+ +...+-...+.|...++...
T Consensus 83 ~~v~~~~~s~d-~~l~-~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 83 AGVADLTWVGE-RGIL-VASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp SCEEEEEEETT-TEEE-EEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTT
T ss_pred CCEEEEEEeCC-CeEE-EEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCC
Confidence 34778999874 5655 44566788888887654211111 222233457889999754 55556666788999998765
Q ss_pred ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCce-EEEec-CCCCCceEEEEe
Q psy13635 150 KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHR-KVLVN-TDLVEPRAITLS 227 (357)
Q Consensus 150 ~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~-~~~~~-~~~~~P~giavd 227 (357)
........ --.....+++.+.+..++++....+.|...+...... ..+.. .....+..++++
T Consensus 160 ~~~~~~~~----------------h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 160 VVLSSYRA----------------HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH 223 (344)
T ss_dssp EEEEEECC----------------CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEEC
T ss_pred cEEEEEcC----------------cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeec
Confidence 43322211 1124567888877777888877778898888874433 33221 123457889999
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCC
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLP 307 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~ 307 (357)
|.++.++.+-... +.|...++........+........++++.+.+.++..+-...+.|...|........+ ...-.
T Consensus 224 p~~~~~l~sg~~d--g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-~~H~~ 300 (344)
T 4gqb_B 224 PQQSEVFVFGDEN--GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-QAHRD 300 (344)
T ss_dssp SSCTTEEEEEETT--SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-CCCSS
T ss_pred CCCCcceEEeccC--CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-cCCCC
Confidence 8777777665442 57888887654443333344455689999876666666666677888888866544333 23344
Q ss_pred ceEEEEEE--CCEEEEEeCCCCeEEEEeC
Q psy13635 308 HVFGISLL--GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 308 ~p~gia~~--~~~ly~td~~~~~I~~~~~ 334 (357)
...++++. +..++.+-...++|..-+.
T Consensus 301 ~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 301 FVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred CEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 56778875 4567766656677765544
No 188
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.37 E-value=0.0014 Score=60.05 Aligned_cols=185 Identities=12% Similarity=0.006 Sum_probs=121.1
Q ss_pred eEEEEEe-CCcEEEEEcCCCCcceEec--cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc--
Q psy13635 42 QMLLFAT-SKDIRIANLSRPLKPVTII--KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-- 116 (357)
Q Consensus 42 ~~l~~~~-~~~i~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-- 116 (357)
.+++.+. ...|+..|+.+........ .......++++.+.++.++.+-..++.|...++.+.. ...+....
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~ 162 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV----IQVFAKTDSW 162 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE----EEEEECCCCS
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc----eEEEeccCCC
Confidence 3444444 4679999998744333332 3566788999998666666676777889999998753 33332221
Q ss_pred -CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 117 -ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 117 -~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
.....+++.+.+..| ++-...+.|...++++.....+... .....++++.+.+..++++..
T Consensus 163 ~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~h-----------------~~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 163 DYWYCCVDVSVSRQML-ATGDSTGRLLLLGLDGHEIFKEKLH-----------------KAKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp SCCEEEEEEETTTTEE-EEEETTSEEEEEETTSCEEEEEECS-----------------SSCEEEEEECSSCTTEEEEEE
T ss_pred CCCeEEEEECCCCCEE-EEECCCCCEEEEECCCCEEEEeccC-----------------CCcEEEEEECCCCCCEEEEEe
Confidence 457889999755544 5555678999999977655444311 125678888877764666766
Q ss_pred CCCeEEEEEcCC-----CceEEEecCCCCCceEEEEeC-CCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 196 GTDRIEVCRLEG-----THRKVLVNTDLVEPRAITLSP-AHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 196 ~~~~I~~~~~~g-----~~~~~~~~~~~~~P~giavd~-~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
..+.|...++.. .....+ ........++++| ....|+.+... +.|...++...
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d---~~i~iwd~~~~ 283 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQR---NEIRVYSSYDW 283 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESS---SEEEEEETTBT
T ss_pred CCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCC---CcEEEEECCCC
Confidence 678899888874 222223 2345788999998 65556555543 57888887643
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.37 E-value=0.0013 Score=66.27 Aligned_cols=267 Identities=11% Similarity=0.078 Sum_probs=154.8
Q ss_pred cEEEEEcCCCCcceEeccC-----C-CcEEEEEEEccCCEEEEEeCCCC----eEEEEEcCCCCcceeEEEEeCCcCCce
Q psy13635 51 DIRIANLSRPLKPVTIIKD-----L-EEGAAIDYYYKKSMVCWTDHGTE----MISCCTFDGNNVGSKHNVITNGLITPD 120 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~-----~-~~~~~i~~d~~~~~ly~~d~~~~----~I~~~~~~g~~~~~~~~~~~~~~~~p~ 120 (357)
.|++.+..++....++-.+ . ....+++++|++..|.++....+ .|+..++++... ........ ...
T Consensus 99 ~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~---~~~~~~~~-~~~ 174 (710)
T 2xdw_A 99 VLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE---LPDVLERV-KFS 174 (710)
T ss_dssp EEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE---EEEEEEEE-CSC
T ss_pred EEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC---CcccccCc-ccc
Confidence 4677776553322222111 1 13567899998888876644322 799999988741 22111111 256
Q ss_pred eEEEEcCCCeEEEEeCCC---------------CEEEEEEcCCCceE-EEEecCCCCcceeeeeccCcccccCCceEEEe
Q psy13635 121 GLAIDWLTEKLYWTDSET---------------NKLEVSSLDGKKRK-VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVD 184 (357)
Q Consensus 121 glavd~~~~~ly~td~~~---------------~~I~~~~~~g~~~~-~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD 184 (357)
++++.+.++.||++.... .+|++.++.+...+ .++...-.. -....++++.
T Consensus 175 ~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~-------------~~~~~~~~~S 241 (710)
T 2xdw_A 175 CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE-------------PKWMGGAELS 241 (710)
T ss_dssp CEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC-------------TTCEEEEEEC
T ss_pred eEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC-------------CeEEEEEEEc
Confidence 788888888898876432 35888888654321 222111100 0123477888
Q ss_pred CCCCeEEEEeC-C---CCeEEEEEcCC------C--ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEecC
Q psy13635 185 WVARNLYWTDT-G---TDRIEVCRLEG------T--HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEK-RPKIERSLLN 251 (357)
Q Consensus 185 ~~~~~lY~td~-~---~~~I~~~~~~g------~--~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~~d 251 (357)
+.++.|+++.. . ...|+..++++ . ....+.... . ...-.+++.++.||+...... +.+|+.++++
T Consensus 242 pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 242 DDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF-E-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp TTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS-S-SCEEEEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred CCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC-C-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 88888877653 2 45899999875 2 234443322 1 122246666788888765422 4689999998
Q ss_pred CCc---eEEEeeCCC-CCceEEEEecCCCEEEEEeCCC--CeEEEEeC-CCCCeEEEecCCCCceEEEEEE--CCEEEEE
Q psy13635 252 GGE---RVLLVKDRL-GWPNGITLDVDNEKLYWCDAKT--DKIEMIDF-DGNNRRELINENLPHVFGISLL--GDYVYWT 322 (357)
Q Consensus 252 g~~---~~~~~~~~l-~~P~giaid~~~~~lY~~d~~~--~~I~~~~~-dG~~~~~i~~~~~~~p~gia~~--~~~ly~t 322 (357)
+.. .+.++...- ....++++. .+++|+++.... .+|+.+++ +|...+.+.. ......+++.. ++.++++
T Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~-~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 320 DPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPL-EVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp SCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTCCEEEEECC-CSSEEEEEECCTTCSEEEEE
T ss_pred CCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCCCEEEecCC-CCceEEEEecCCCCCEEEEE
Confidence 764 245543321 235567775 478888776544 46888888 6664444432 23344555553 3466654
Q ss_pred --eC-CCCeEEEEeCccCc
Q psy13635 323 --DW-QRRSIDRVNKITGN 338 (357)
Q Consensus 323 --d~-~~~~I~~~~~~~g~ 338 (357)
+. ..++|+.++..+|+
T Consensus 398 ~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 398 FTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECSSCCCEEEEEETTSSS
T ss_pred EeCCCCCCEEEEEECCCCc
Confidence 22 23678888886666
No 190
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.37 E-value=0.0013 Score=60.61 Aligned_cols=285 Identities=8% Similarity=0.000 Sum_probs=163.6
Q ss_pred EeecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc----ee
Q psy13635 34 ALSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG----SK 108 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~----~~ 108 (357)
++.-++...+|+-+. +..|+..|+........+.........++|++.+..| .+-..++.+...++...... ..
T Consensus 71 ~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~l-as~~~d~~v~iw~~~~~~~~~~~~~~ 149 (380)
T 3iz6_a 71 SLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSV-ACGGLDSACSIFNLSSQADRDGNMPV 149 (380)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEE-EECCSSSCCEEEECCCCSSCCCSSTT
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEE-EEeeCCCcEEEEECCCCccccCCccc
Confidence 333344555555555 4568888987644444444445567788898865554 45455566666666432100 00
Q ss_pred EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 109 HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 109 ~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
...+...-.....+++.+..+..+++-+..+.|...++.............. .........+++.+.++
T Consensus 150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~-----------~~h~~~v~~~~~~~~~~ 218 (380)
T 3iz6_a 150 SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP-----------SGHTADVLSLSINSLNA 218 (380)
T ss_dssp CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS-----------SSCCSCEEEEEECSSSC
T ss_pred eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC-----------CCCccCeEEEEeecCCC
Confidence 1112222233455666665566667777788899888865544333321110 11112445677776677
Q ss_pred eEEEEeCCCCeEEEEEcC-CCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-----
Q psy13635 189 NLYWTDTGTDRIEVCRLE-GTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR----- 262 (357)
Q Consensus 189 ~lY~td~~~~~I~~~~~~-g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~----- 262 (357)
.++++....+.|...++. +................++++|.... +.+-... +.|...++........+...
T Consensus 219 ~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~D--~~i~lwd~~~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 219 NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQR-FGTGSDD--GTCRLFDMRTGHQLQVYNREPDRND 295 (380)
T ss_dssp CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSE-EEEECSS--SCEEEEETTTTEEEEEECCCCSSSC
T ss_pred CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCe-EEEEcCC--CeEEEEECCCCcEEEEecccccccc
Confidence 888888888889998876 32222223334456789999986444 4444442 57888887765544443221
Q ss_pred --CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec----CCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 263 --LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN----ENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 263 --l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~----~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
......+++.+. +++.++-...+.|...+.........+. ........+++. ++...++-...+.|..-+.
T Consensus 296 ~~~~~v~~~~~s~~-g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 296 NELPIVTSVAFSIS-GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp CSSCSCSEEEECSS-SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred cccCceEEEEECCC-CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 123578999854 5555566667889999875444322221 122334667776 3556666666677776665
No 191
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.36 E-value=0.00044 Score=62.08 Aligned_cols=249 Identities=11% Similarity=-0.045 Sum_probs=144.9
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCC-eEEEEeCCCCEEEEEEc-C
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTE-KLYWTDSETNKLEVSSL-D 147 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~-~ly~td~~~~~I~~~~~-~ 147 (357)
-....++++++.+..|+.+. .++.|+..+++..............-..+..+++.+.++ .|+.+ ...+.|...++ .
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITS-WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG-TVQGEILKVDLIG 88 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEE-TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEE-ETTSCEEEECSSS
T ss_pred CCcEEEEEEcCCCCEEEEEc-CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEE-cCCCeEEEEEecc
Confidence 34678899998766666554 557777777765531011222223345678899997655 45544 45788999998 7
Q ss_pred CCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCC---------CceEEEecCCC
Q psy13635 148 GKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEG---------THRKVLVNTDL 218 (357)
Q Consensus 148 g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g---------~~~~~~~~~~~ 218 (357)
+.....+.... .-.....+++.+ ++ ++++....+.|...++.. ........ .-
T Consensus 89 ~~~~~~~~~~~---------------~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~ 150 (342)
T 1yfq_A 89 SPSFQALTNNE---------------ANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VK 150 (342)
T ss_dssp SSSEEECBSCC---------------CCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SC
T ss_pred CCceEeccccC---------------CCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eC
Confidence 66543331100 112456888887 44 444555567888887653 21111111 23
Q ss_pred CCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC-Cc--eEEEeeCCCCCceEEEEec-CCCEEEEEeCCCCeEEEEeCC
Q psy13635 219 VEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG-GE--RVLLVKDRLGWPNGITLDV-DNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 219 ~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg-~~--~~~~~~~~l~~P~giaid~-~~~~lY~~d~~~~~I~~~~~d 294 (357)
..+..+++++. + ++.+... +.|...++.. .. ........-..+..+++.+ .+..++ +-...+.|...+.+
T Consensus 151 ~~v~~~~~~~~-~-l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~-~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 151 NKIFTMDTNSS-R-LIVGMNN---SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYA-CSSIDGRVAVEFFD 224 (342)
T ss_dssp CCEEEEEECSS-E-EEEEEST---TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEE-EEETTSEEEEEECC
T ss_pred CceEEEEecCC-c-EEEEeCC---CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEE-EEecCCcEEEEEEc
Confidence 46788999864 3 6666544 5888888876 32 2223223334578899986 555444 44456778776665
Q ss_pred CC------CeEEEecCCC---------CceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEe
Q psy13635 295 GN------NRRELINENL---------PHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVII 344 (357)
Q Consensus 295 G~------~~~~i~~~~~---------~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~ 344 (357)
.. .....+.... .....+++. .+.+.++-...+.|...+..+++....+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh
Confidence 43 2222222221 155677776 35545555566888888887777655543
No 192
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.36 E-value=0.001 Score=59.84 Aligned_cols=280 Identities=6% Similarity=-0.086 Sum_probs=154.5
Q ss_pred EeecCCCCeEEEEEe-----CCcEEEEEcCCCCcceE-eccCCCcEEEEEEEccC--CEEEEEeCCCCeEEEEEcCCCCc
Q psy13635 34 ALSHHVAAQMLLFAT-----SKDIRIANLSRPLKPVT-IIKDLEEGAAIDYYYKK--SMVCWTDHGTEMISCCTFDGNNV 105 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-----~~~i~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~~--~~ly~~d~~~~~I~~~~~~g~~~ 105 (357)
++.-++..+.++.+. ...|+..++.+...... .........++++.+.. +.++++...++.|...++....
T Consensus 23 ~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~- 101 (357)
T 3i2n_A 23 DCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE- 101 (357)
T ss_dssp EEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS-
T ss_pred EEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC-
Confidence 444455555555555 45688888876432222 22455678899998873 4555565667788888887653
Q ss_pred ceeEEEEeCCcCCceeEEE------EcCCCeEEEEeCCCCEEEEEEcCCCc--eEEEEecCCCCcceeeeeccCcccccC
Q psy13635 106 GSKHNVITNGLITPDGLAI------DWLTEKLYWTDSETNKLEVSSLDGKK--RKVLYWEDIDQPRAIASYKLPTIEVEH 177 (357)
Q Consensus 106 ~~~~~~~~~~~~~p~glav------d~~~~~ly~td~~~~~I~~~~~~g~~--~~~~~~~~~~~p~~i~~~~~~~~~~~~ 177 (357)
.....+...-.....+++ .+ ++..+++-...+.|...++.... ...+.... . ..-..
T Consensus 102 -~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~------------~~~~~ 166 (357)
T 3i2n_A 102 -MPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ-G------------ENKRD 166 (357)
T ss_dssp -SCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT-T------------SCCCC
T ss_pred -ccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccC-C------------CCCCc
Confidence 113333333344556643 33 34455555567888888886543 22221100 0 00112
Q ss_pred CceEE----EeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeC---CCCEEEEEeCCCCCCeEEEEec
Q psy13635 178 PDGVA----VDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSP---AHGYLFWSDWNEKRPKIERSLL 250 (357)
Q Consensus 178 p~gla----vD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~---~~g~Ly~~d~~~~~~~I~~~~~ 250 (357)
...++ +.+ .+.++++....+.|...++.......... .......++++| ....|+.+... +.|...++
T Consensus 167 v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~ 241 (357)
T 3i2n_A 167 CWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETN-IKNGVCSLEFDRKDISMNKLVATSLE---GKFHVFDM 241 (357)
T ss_dssp EEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEESCSSSSCCEEEEEEST---TEEEEEEE
T ss_pred eEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecC-CCCceEEEEcCCCCCCCCEEEEECCC---CeEEEEeC
Confidence 33444 333 34455555556789999988765543332 345688999998 65666666544 47766665
Q ss_pred CCCceE-E----EeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe-------------------EEEecCCC
Q psy13635 251 NGGERV-L----LVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR-------------------RELINENL 306 (357)
Q Consensus 251 dg~~~~-~----~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~-------------------~~i~~~~~ 306 (357)
...... . ...........+++.+.+..++++-...+.|...+...... ........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST 321 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCC
Confidence 432211 1 11133455688999865543666666677887777643211 11111223
Q ss_pred CceEEEEEE--CCEEEEEeCCCCeEEEEeC
Q psy13635 307 PHVFGISLL--GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 307 ~~p~gia~~--~~~ly~td~~~~~I~~~~~ 334 (357)
....++++. +..+.++-...+.|...+.
T Consensus 322 ~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 322 QPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 345667775 2345545556677766665
No 193
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.36 E-value=2.9e-05 Score=69.88 Aligned_cols=256 Identities=11% Similarity=0.119 Sum_probs=148.6
Q ss_pred EEEEEe-CCcEEEEEcCCCCcceEeccCC-CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCce
Q psy13635 43 MLLFAT-SKDIRIANLSRPLKPVTIIKDL-EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPD 120 (357)
Q Consensus 43 ~l~~~~-~~~i~~~~~~~~~~~~~~~~~~-~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~ 120 (357)
.++++. ...|.++|.++ +........ ....++..+. ++.||++... |++++.+|.... .. ........
T Consensus 32 ~l~v~t~~~~l~~~d~~g--~~~~~~~~~~~~~~~~~~~~-~g~l~v~t~~---l~~~d~~g~~~~---~~-~~~~~~~~ 101 (330)
T 3hxj_A 32 TIYLGSSNKNLYAINTDG--SVKWFFKSGEIIECRPSIGK-DGTIYFGSDK---VYAINPDGTEKW---RF-DTKKAIVS 101 (330)
T ss_dssp CEECSSTTTTTEEECTTS--CEEESSCGGGEEEECCEETT-TTEECCSSCE---EEEECCCGGGGG---GS-CC-----C
T ss_pred eEEEEcCCCEEEEECCCC--cEEEEEecCCCcccceEEec-CCcEEEecCc---EEEECCCCcEEE---EE-ECCCCccc
Confidence 355544 45688888333 222222211 1223455543 6788875433 888887655311 10 00111123
Q ss_pred eEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeE
Q psy13635 121 GLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRI 200 (357)
Q Consensus 121 glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I 200 (357)
..+++ ++.||+.. ..+.|.+++.+|...-... .. . .....+++| .++.||+... .+.|
T Consensus 102 ~~~~~--~~~l~v~t-~~~~l~~~d~~g~~~~~~~-~~-------------~---~~~~~~~~~-~~g~l~vgt~-~~~l 159 (330)
T 3hxj_A 102 DFTIF--EDILYVTS-MDGHLYAINTDGTEKWRFK-TK-------------K---AIYATPIVS-EDGTIYVGSN-DNYL 159 (330)
T ss_dssp CEEEE--TTEEEEEC-TTSEEEEECTTSCEEEEEE-CS-------------S---CCCSCCEEC-TTSCEEEECT-TSEE
T ss_pred CceEE--CCEEEEEe-cCCEEEEEcCCCCEEEEEc-CC-------------C---ceeeeeEEc-CCCEEEEEcC-CCEE
Confidence 34555 77787765 3578999998855332221 11 0 123445666 4667887654 4689
Q ss_pred EEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEE
Q psy13635 201 EVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYW 280 (357)
Q Consensus 201 ~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~ 280 (357)
..++.+|+....... .......+++|+ +|.||++. + .|.+.+.+|....... .....+.++++| .++.||+
T Consensus 160 ~~~d~~g~~~~~~~~-~~~~~~~~~~d~-~g~l~v~t-~----~l~~~d~~g~~~~~~~-~~~~~~~~~~~~-~~g~l~v 230 (330)
T 3hxj_A 160 YAINPDGTEKWRFKT-NDAITSAASIGK-DGTIYFGS-D----KVYAINPDGTEKWNFY-AGYWTVTRPAIS-EDGTIYV 230 (330)
T ss_dssp EEECTTSCEEEEEEC-SSCCCSCCEECT-TCCEEEES-S----SEEEECTTSCEEEEEC-CSSCCCSCCEEC-TTSCEEE
T ss_pred EEECCCCCEeEEEec-CCCceeeeEEcC-CCEEEEEe-C----EEEEECCCCcEEEEEc-cCCcceeceEEC-CCCeEEE
Confidence 999988655433332 223456677875 58899887 3 7888886665444332 222446778887 5779998
Q ss_pred EeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 281 CDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 281 ~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
+.. .+.+.+++.+|........ ....+..+.++ ++.||+... .+.|+++++ +|+.....
T Consensus 231 ~t~-~~gl~~~~~~g~~~~~~~~-~~~~~~~~~~~~~g~l~v~t~-~ggl~~~d~-~g~~~~~~ 290 (330)
T 3hxj_A 231 TSL-DGHLYAINPDGTEKWRFKT-GKRIESSPVIGNTDTIYFGSY-DGHLYAINP-DGTEKWNF 290 (330)
T ss_dssp EET-TTEEEEECTTSCEEEEEEC-SSCCCSCCEECTTSCEEEECT-TCEEEEECT-TSCEEEEE
T ss_pred EcC-CCeEEEECCCCCEeEEeeC-CCCccccceEcCCCeEEEecC-CCCEEEECC-CCcEEEEE
Confidence 875 4688888887765544332 22233446667 688888764 468999997 77765544
No 194
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.35 E-value=0.0013 Score=58.51 Aligned_cols=259 Identities=8% Similarity=-0.021 Sum_probs=154.8
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
.....+++|+|.+..|. +-..++.|...++.... ....+...-.....+++.+.++ +.++-...+.|...++...
T Consensus 13 ~~~V~~~~fsp~~~~l~-s~~~dg~v~lWd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVL-TTLYSGRVELWNYETQV---EVRSIQVTETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp CSCEEEEEECSSSSEEE-EEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTTC
T ss_pred CCceEEEEECCCCCEEE-EEcCCCcEEEEECCCCc---eeEEeeccCCcEEEEEEeCCCC-EEEEECCCCEEEEEECCCC
Confidence 34678899998666555 44466788888887653 2333333334567788887554 4555556789999998654
Q ss_pred ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC-ceEEEecCCCCCceEEEEeC
Q psy13635 150 KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT-HRKVLVNTDLVEPRAITLSP 228 (357)
Q Consensus 150 ~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~-~~~~~~~~~~~~P~giavd~ 228 (357)
.....+... -.....+++.+.+..| ++-...+.|..-+.... ...............++++|
T Consensus 88 ~~~~~~~~h----------------~~~v~~~~~~~~~~~l-~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 88 EKVVDFEAH----------------PDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp CEEEEEECC----------------SSCEEEEEECSSSSEE-EEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred cEEEEEeCC----------------CCcEEEEEEcCCCCEE-EEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECC
Confidence 433222111 1245678888765544 46666678888887654 33333433445678999998
Q ss_pred CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-CCCceEEEEecC-CCEEEEEeCCCCeEEEEeCCCCCeEEEecCCC
Q psy13635 229 AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR-LGWPNGITLDVD-NEKLYWCDAKTDKIEMIDFDGNNRRELINENL 306 (357)
Q Consensus 229 ~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~-l~~P~giaid~~-~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~ 306 (357)
.++.++.+-... +.|...++............ ......+++.+. ++.+.++-...+.|...+.........+....
T Consensus 151 ~~~~~l~sgs~D--~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~ 228 (304)
T 2ynn_A 151 KDPSTFASGCLD--RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM 228 (304)
T ss_dssp TCTTEEEEEETT--SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCCCEEEEEeCC--CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCC
Confidence 655555554442 47777777544332222222 223345565432 44455565667788888886554433343344
Q ss_pred CceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCcee
Q psy13635 307 PHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVT 352 (357)
Q Consensus 307 ~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~ 352 (357)
.....+++. .+.+..+-...+.|...+..+++....+..+......
T Consensus 229 ~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~ 275 (304)
T 2ynn_A 229 SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC 275 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEE
T ss_pred CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEE
Confidence 455666665 3455666666788888887777777766555444333
No 195
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.34 E-value=0.0003 Score=70.58 Aligned_cols=246 Identities=11% Similarity=0.053 Sum_probs=136.2
Q ss_pred EeecCCCCeEEEEEeC----------CcEEEEEcCCCCcceEeccCCC---cEEEEEEEccCCEEEEEeCCCCeEEEEEc
Q psy13635 34 ALSHHVAAQMLLFATS----------KDIRIANLSRPLKPVTIIKDLE---EGAAIDYYYKKSMVCWTDHGTEMISCCTF 100 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~----------~~i~~~~~~~~~~~~~~~~~~~---~~~~i~~d~~~~~ly~~d~~~~~I~~~~~ 100 (357)
+++-++...+|+++.. ..++..|++++.. ..+..... .+..++++|++..|.++.. +.|+..++
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~ 141 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAH 141 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESS
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC--CeEEEEEC
Confidence 3445556667777764 5688899877433 33322111 2566788998888877664 57999888
Q ss_pred CCCCcceeEEEEeCCcC------------------CceeEEEEcCCCeEEEEeCCCC-----------------------
Q psy13635 101 DGNNVGSKHNVITNGLI------------------TPDGLAIDWLTEKLYWTDSETN----------------------- 139 (357)
Q Consensus 101 ~g~~~~~~~~~~~~~~~------------------~p~glavd~~~~~ly~td~~~~----------------------- 139 (357)
++.. ...+...+.. .+.++++.+.++.|+++.....
T Consensus 142 ~~g~---~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (723)
T 1xfd_A 142 VGKQ---AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY 218 (723)
T ss_dssp SSSC---CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred CCCc---eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence 8764 1333322221 2368999988888877653221
Q ss_pred ----------EEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE-EeCCC--CeEEEEEc
Q psy13635 140 ----------KLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW-TDTGT--DRIEVCRL 205 (357)
Q Consensus 140 ----------~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~-td~~~--~~I~~~~~ 205 (357)
+|...++.+... ..+. .. ..+ .........+++.+.+..|+. ++... ..|...++
T Consensus 219 ~~~G~~~~~~~l~~~d~~~~~~~~~l~-~~-~~~---------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 219 PKAGSENPSISLHVIGLNGPTHDLEMM-PP-DDP---------RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp CBTTSCCCEEEEEEEESSSSCCCEECC-CC-CCG---------GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred CCCCCCCCeeEEEEEECCCCceeEEee-CC-ccC---------CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence 344444433321 1110 00 000 000112345777766655533 34332 36888888
Q ss_pred CCCceEEEecC---CCCC--ceEEEEeCCCCEEEEE-eCCCC----CCeEEEEe-cCCCc---eEEEeeCCCCCceEEEE
Q psy13635 206 EGTHRKVLVNT---DLVE--PRAITLSPAHGYLFWS-DWNEK----RPKIERSL-LNGGE---RVLLVKDRLGWPNGITL 271 (357)
Q Consensus 206 ~g~~~~~~~~~---~~~~--P~giavd~~~g~Ly~~-d~~~~----~~~I~~~~-~dg~~---~~~~~~~~l~~P~giai 271 (357)
++.....+... .... +..++++|.+..|+++ ..... ..+|+..+ .++.. ...+..........+++
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~ 367 (723)
T 1xfd_A 288 TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAY 367 (723)
T ss_dssp TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEE
T ss_pred CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEE
Confidence 76554444321 1111 2478899986677775 33211 13788888 55554 33332222222233689
Q ss_pred ecCCCEEEEEeCC----CCeEEEEeCCCC
Q psy13635 272 DVDNEKLYWCDAK----TDKIEMIDFDGN 296 (357)
Q Consensus 272 d~~~~~lY~~d~~----~~~I~~~~~dG~ 296 (357)
+++++.||++... ...++.++.+|.
T Consensus 368 spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 368 DEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp ETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred cCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 9889999887543 456888888775
No 196
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.33 E-value=0.0017 Score=58.85 Aligned_cols=242 Identities=10% Similarity=0.071 Sum_probs=143.4
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR 151 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~ 151 (357)
...++++++.+..|+ +...++.|+..++++... +....+...-..+.++++.+.++.|+ +-...+.|...++.....
T Consensus 10 ~i~~~~~s~~~~~l~-~~~~d~~v~i~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 10 PISCHAWNKDRTQIA-ICPNNHEVHIYEKSGNKW-VQVHELKEHNGQVTGVDWAPDSNRIV-TCGTDRNAYVWTLKGRTW 86 (372)
T ss_dssp CCCEEEECTTSSEEE-EECSSSEEEEEEEETTEE-EEEEEEECCSSCEEEEEEETTTTEEE-EEETTSCEEEEEEETTEE
T ss_pred CeEEEEECCCCCEEE-EEeCCCEEEEEeCCCCcE-EeeeeecCCCCcccEEEEeCCCCEEE-EEcCCCeEEEEECCCCee
Confidence 466788887655554 444567888888876620 02334444445678999998555554 444567888888765542
Q ss_pred EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCc----eEEEecCCCCCceEEEEe
Q psy13635 152 KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTH----RKVLVNTDLVEPRAITLS 227 (357)
Q Consensus 152 ~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~----~~~~~~~~~~~P~giavd 227 (357)
...... ...-..+..+++.+.+..|+.+. ..+.|...+.+... ...+..........++++
T Consensus 87 ~~~~~~--------------~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 87 KPTLVI--------------LRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp EEEEEC--------------CCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred eeeEEe--------------ecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence 222110 01112467788887666666554 44677777766543 223323334568899999
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecC------------------CCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEE
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLN------------------GGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIE 289 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~d------------------g~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~ 289 (357)
|....|+.+... +.|...++. .......+...-....++++++.+..|+.+. ..+.|.
T Consensus 152 ~~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~ 227 (372)
T 1k8k_C 152 PNSVLLAAGSCD---FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVC 227 (372)
T ss_dssp TTSSEEEEEETT---SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEE
T ss_pred CCCCEEEEEcCC---CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEE
Confidence 876566665544 466666642 1222222223334578999986665655554 567899
Q ss_pred EEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCcc
Q psy13635 290 MIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKIT 336 (357)
Q Consensus 290 ~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~ 336 (357)
..+.........+.........+++. ++.++.+. ..+.|...+..+
T Consensus 228 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 228 LADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99985444333333334456778887 56666665 566776666544
No 197
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.32 E-value=0.0013 Score=60.39 Aligned_cols=255 Identities=9% Similarity=-0.054 Sum_probs=148.3
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc---ceeEEEEeCCcCCceeEEEEcC---CC---eEEEEeCCCCE
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV---GSKHNVITNGLITPDGLAIDWL---TE---KLYWTDSETNK 140 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~---~~~~~~~~~~~~~p~glavd~~---~~---~ly~td~~~~~ 140 (357)
-....++++++ + ++++...++.|+..+++.... ......+...-.....+++.+. .+ .++++-...+.
T Consensus 16 ~~~i~~~~~~~--~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~ 92 (397)
T 1sq9_A 16 DADIFSVSACN--S-FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGD 92 (397)
T ss_dssp SSCEEEEEECS--S-EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSC
T ss_pred hcCeEEEEecC--C-eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCC
Confidence 34677888876 3 555555677888888876630 0013333333445788899875 14 55555555778
Q ss_pred EEEEEcCCCce-----EEEEecCCCCcceeeeeccCcccccCCceEEEe----CCCCe-EEEEeCCCCeEEEEEcCC---
Q psy13635 141 LEVSSLDGKKR-----KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVD----WVARN-LYWTDTGTDRIEVCRLEG--- 207 (357)
Q Consensus 141 I~~~~~~g~~~-----~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD----~~~~~-lY~td~~~~~I~~~~~~g--- 207 (357)
|...++..... ..... .... ...-.....+++. +.+.. |+.+ ...+.|...++..
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~v~~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLD-LLDS----------DMKKHSFWALKWGASNDRLLSHRLVAT-DVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEEC-CSCT----------TGGGSCEEEEEEECCC----CEEEEEE-ETTSCEEEEEEESSSS
T ss_pred EEEEEccCCcccccccceeec-cccc----------ccCCCcEEEEEEeeccCCCCceEEEEE-eCCCcEEEEeCCcccc
Confidence 88888765442 11111 0000 0001356778888 76666 5544 4456777777654
Q ss_pred ----CceE-----EEe------cCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC---C---CCCc
Q psy13635 208 ----THRK-----VLV------NTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD---R---LGWP 266 (357)
Q Consensus 208 ----~~~~-----~~~------~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~---~---l~~P 266 (357)
.... .+. ......+..++++|.. ++++-.. .+.|...++........+.. . -...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFN--NGTVQISELSTLRPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECT--TSEEEEEETTTTEEEEEEECCC---CCCCCE
T ss_pred ccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeC--CCcEEEEECCCCceeEEEeccccccccCCcc
Confidence 2222 332 2234567899999864 4444433 26898888876555444443 2 4567
Q ss_pred eEEEEecCCCEEEEEeCCC---CeEEEEeCCCCCeEEEecC-------------CCCceEEEEEE-CCEEEEEeCCCCeE
Q psy13635 267 NGITLDVDNEKLYWCDAKT---DKIEMIDFDGNNRRELINE-------------NLPHVFGISLL-GDYVYWTDWQRRSI 329 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~~---~~I~~~~~dG~~~~~i~~~-------------~~~~p~gia~~-~~~ly~td~~~~~I 329 (357)
..+++++.+..|+.+. .. +.|...+.........+.. .......+++. ++..+++-...+.|
T Consensus 237 ~~i~~~~~~~~l~~~~-~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAH-DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp EEEEECSSTTEEEEEE-EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred ceEEECCCCCEEEEEe-cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 8999987666555544 34 7899999865443333332 33455777776 34455555567889
Q ss_pred EEEeCccCceeEEEe
Q psy13635 330 DRVNKITGNDREVII 344 (357)
Q Consensus 330 ~~~~~~~g~~~~~i~ 344 (357)
...+..+++....+.
T Consensus 316 ~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 316 RFWDVKTKERITTLN 330 (397)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEEcCCCceeEEEe
Confidence 888887787777666
No 198
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.30 E-value=0.0017 Score=57.67 Aligned_cols=251 Identities=6% Similarity=-0.006 Sum_probs=147.8
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
.....++++++.+..|. +-..++.|...+..... ....+.........+++.+.+ ++.++-...+.|...++...
T Consensus 23 ~~~v~~~~~s~~~~~l~-s~~~dg~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp SSCEEEEEECTTSSEEE-EEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTC
T ss_pred CCcEEEEEECCCCCEEE-EeeCCCeEEEEeCCCcc---cchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEEECCCC
Confidence 34678899998666554 44455677777776543 233444444567889999755 45555556789999998755
Q ss_pred ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCC
Q psy13635 150 KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPA 229 (357)
Q Consensus 150 ~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~ 229 (357)
......... -.....+++.+.+..|+ +....+.|...++..................++++|.
T Consensus 98 ~~~~~~~~~----------------~~~v~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 98 KCLKTLKGH----------------SNYVFCCNFNPQSNLIV-SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp CEEEEEECC----------------SSCEEEEEECSSSSEEE-EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred cEEEEEcCC----------------CCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCC
Confidence 433322211 12345677876555554 5555678888888754443333333345688999987
Q ss_pred CCEEEEEeCCCCCCeEEEEecCCCceE-EEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCc
Q psy13635 230 HGYLFWSDWNEKRPKIERSLLNGGERV-LLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPH 308 (357)
Q Consensus 230 ~g~Ly~~d~~~~~~~I~~~~~dg~~~~-~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~ 308 (357)
...|+.+... +.|...++...... .+..........+++++.+..|..+ ...+.|...+................
T Consensus 161 ~~~l~~~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~ 236 (312)
T 4ery_A 161 GSLIVSSSYD---GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNE 236 (312)
T ss_dssp SSEEEEEETT---SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEE-ETTTEEEEEETTTTEEEEEECSSCCS
T ss_pred CCEEEEEeCC---CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEE-cCCCeEEEEECCCCcEEEEEEecCCc
Confidence 5566655544 57888887654433 3322233344678898665555544 45678988888654433333221111
Q ss_pred --eEEEEE--ECCEEEEEeCCCCeEEEEeCccCceeEEEecc
Q psy13635 309 --VFGISL--LGDYVYWTDWQRRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 309 --p~gia~--~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~ 346 (357)
...... .++.++++-...+.|+..+..+++....+..+
T Consensus 237 ~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 278 (312)
T 4ery_A 237 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 278 (312)
T ss_dssp SSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCC
T ss_pred eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhcc
Confidence 111122 24555666666677877777666665555433
No 199
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.29 E-value=0.0018 Score=57.60 Aligned_cols=254 Identities=8% Similarity=-0.003 Sum_probs=152.7
Q ss_pred cCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC
Q psy13635 37 HHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 37 ~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
-++...+++.+. ...|+..++..................+++++.++.|+ +-..++.|...++.... ....+...
T Consensus 31 ~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~---~~~~~~~~ 106 (312)
T 4ery_A 31 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV-SASDDKTLKIWDVSSGK---CLKTLKGH 106 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCC---EEEEEECC
T ss_pred ECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEE-EECCCCEEEEEECCCCc---EEEEEcCC
Confidence 344455565555 45688888866444444444556788999998665555 44556788888887653 23344444
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
-.....+++.+.++ ++++-...+.|...++............ -.....+++.+.+..| ++..
T Consensus 107 ~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l-~~~~ 168 (312)
T 4ery_A 107 SNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAH----------------SDPVSAVHFNRDGSLI-VSSS 168 (312)
T ss_dssp SSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCC----------------SSCEEEEEECTTSSEE-EEEE
T ss_pred CCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEEEEEecCC----------------CCcEEEEEEcCCCCEE-EEEe
Confidence 45577889987554 4555556788999998654433222111 1234677887655444 4555
Q ss_pred CCCeEEEEEcCCCc-eEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCC--ceEEEEe
Q psy13635 196 GTDRIEVCRLEGTH-RKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGW--PNGITLD 272 (357)
Q Consensus 196 ~~~~I~~~~~~g~~-~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~--P~giaid 272 (357)
..+.|...++.... ...+..........++++|....|..+... +.|...++............... .....+.
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD---NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT---TEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC---CeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 56788888887443 334433333445778999876666665544 58888888765444333222111 1222333
Q ss_pred cCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE
Q psy13635 273 VDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL 315 (357)
Q Consensus 273 ~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~ 315 (357)
..++.++++-...+.|...+.........+.........+++.
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 288 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 288 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred eCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeec
Confidence 3566677777777889999987655544444444455677775
No 200
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.26 E-value=0.0032 Score=63.31 Aligned_cols=243 Identities=11% Similarity=0.055 Sum_probs=146.2
Q ss_pred ccCCEEEEEeCCC----CeEEEEEcCCCCcceeEEEEeC-Cc-----CCceeEEEEcCCCeEEEEeCCCC----EEEEEE
Q psy13635 80 YKKSMVCWTDHGT----EMISCCTFDGNNVGSKHNVITN-GL-----ITPDGLAIDWLTEKLYWTDSETN----KLEVSS 145 (357)
Q Consensus 80 ~~~~~ly~~d~~~----~~I~~~~~~g~~~~~~~~~~~~-~~-----~~p~glavd~~~~~ly~td~~~~----~I~~~~ 145 (357)
+.++++|++-... ..|++.+..+.. .+.++.. .+ ....++++.+.++.|.++....+ .|++.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d 157 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGE---ARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMK 157 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSC---CEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCC---cEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 5577887764322 267888876653 1333221 11 13457889988888877654322 899999
Q ss_pred cCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC---------------CeEEEEEcCCCce
Q psy13635 146 LDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT---------------DRIEVCRLEGTHR 210 (357)
Q Consensus 146 ~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~---------------~~I~~~~~~g~~~ 210 (357)
+++.......... ....+++..+.++.||++.... ..|++.++.+...
T Consensus 158 ~~tg~~~~~~~~~-----------------~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~ 220 (710)
T 2xdw_A 158 VDGAKELPDVLER-----------------VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS 220 (710)
T ss_dssp TTTTEEEEEEEEE-----------------ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG
T ss_pred CCCCCCCcccccC-----------------cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcc
Confidence 9876543321111 1245677777777888775432 2488888876442
Q ss_pred --EEEecCC--CCCceEEEEeCCCCEEEEEeCCCC--CCeEEEEecCC------C--ceEEEeeCCCCCceEEEEecCCC
Q psy13635 211 --KVLVNTD--LVEPRAITLSPAHGYLFWSDWNEK--RPKIERSLLNG------G--ERVLLVKDRLGWPNGITLDVDNE 276 (357)
Q Consensus 211 --~~~~~~~--~~~P~giavd~~~g~Ly~~d~~~~--~~~I~~~~~dg------~--~~~~~~~~~l~~P~giaid~~~~ 276 (357)
..+.... -....+++++|.++.|+++..... ...|+..++++ . ....+... ...-. -.+++.++
T Consensus 221 ~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~s~dg~ 298 (710)
T 2xdw_A 221 EDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN-FEGEY-DYVTNEGT 298 (710)
T ss_dssp GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS-SSSCE-EEEEEETT
T ss_pred cceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC-CCcEE-EEEeccCC
Confidence 2332221 123468999998888888765221 25899999875 3 24444322 22112 23566788
Q ss_pred EEEEEeCC---CCeEEEEeCCCCC---eEEEecCCC-CceEEEEEE-CCEEEEEeCCCC--eEEEEeCccCceeEEEe
Q psy13635 277 KLYWCDAK---TDKIEMIDFDGNN---RRELINENL-PHVFGISLL-GDYVYWTDWQRR--SIDRVNKITGNDREVII 344 (357)
Q Consensus 277 ~lY~~d~~---~~~I~~~~~dG~~---~~~i~~~~~-~~p~gia~~-~~~ly~td~~~~--~I~~~~~~~g~~~~~i~ 344 (357)
.||+.... +.+|+.++.++.. .+.+....- ....++++. +++++++....+ +|+.++..+|+..+.+.
T Consensus 299 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 299 VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC
Confidence 89887643 4589999987654 245554322 245678887 788888765554 57778865676555543
No 201
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.26 E-value=0.0024 Score=57.77 Aligned_cols=269 Identities=8% Similarity=-0.030 Sum_probs=156.7
Q ss_pred CCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc-ceeEEEEeCC
Q psy13635 38 HVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV-GSKHNVITNG 115 (357)
Q Consensus 38 ~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~ 115 (357)
++...+|+-+. +..|+..|+..................+++++.+..|... ..++.|...++..... ......+...
T Consensus 64 s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~d~~v~iw~~~~~~~~~~~~~~~~~h 142 (340)
T 1got_B 64 GTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACG-GLDNICSIYNLKTREGNVRVSRELAGH 142 (340)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEE-ETTCEEEEEETTTCSBSCEEEEEEECC
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEE-eCCCeEEEEECccCCCcceeEEEecCC
Confidence 44455555544 4568888987654444444455568899999876655544 4567788777765421 0112223333
Q ss_pred cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 116 LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 116 ~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
......+++.+ .+. +++-...+.|...++........+.. --.....+++.+. +.++++..
T Consensus 143 ~~~v~~~~~~~-~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~----------------h~~~v~~~~~~~~-~~~l~sg~ 203 (340)
T 1got_B 143 TGYLSCCRFLD-DNQ-IVTSSGDTTCALWDIETGQQTTTFTG----------------HTGDVMSLSLAPD-TRLFVSGA 203 (340)
T ss_dssp SSCEEEEEEEE-TTE-EEEEETTSCEEEEETTTTEEEEEECC----------------CSSCEEEEEECTT-SSEEEEEE
T ss_pred CccEEEEEECC-CCc-EEEEECCCcEEEEECCCCcEEEEEcC----------------CCCceEEEEECCC-CCEEEEEe
Confidence 34456677764 444 44555678888888765443322211 1124567888864 45666766
Q ss_pred CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-C-CCCceEEEEec
Q psy13635 196 GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-R-LGWPNGITLDV 273 (357)
Q Consensus 196 ~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-~-l~~P~giaid~ 273 (357)
..+.|...++.................+++++|....|..+... +.|...++........... . ......+++.+
T Consensus 204 ~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD---ATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC---CcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 67789988877554443343344568899999975555554443 5788888765544333321 1 22457889986
Q ss_pred CCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC-CEEEEEeCCCCeEE
Q psy13635 274 DNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLG-DYVYWTDWQRRSID 330 (357)
Q Consensus 274 ~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~-~~ly~td~~~~~I~ 330 (357)
. +++..+-...+.|...+.........+...-.....+++.. +....+-...+.|.
T Consensus 281 ~-g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 281 S-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp T-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred C-CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 4 44555555677899988755444334443444556677653 44444444445543
No 202
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.25 E-value=0.0011 Score=60.75 Aligned_cols=204 Identities=13% Similarity=0.051 Sum_probs=131.1
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe--CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT--NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
......++++++.+..++.+...++.|...++.+.. ....+. ..-....++++.+.++.++++-...+.|...++
T Consensus 72 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 148 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN---KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDF 148 (383)
T ss_dssp CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT---CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEET
T ss_pred CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc---cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEEC
Confidence 345688999998763555555567788988988664 133332 234567889998755566666667899999999
Q ss_pred CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEE
Q psy13635 147 DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITL 226 (357)
Q Consensus 147 ~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giav 226 (357)
.+.....+.... ..-.....+++.+.+..|+ +....+.|...++++.....+.. .......+++
T Consensus 149 ~~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~-h~~~v~~~~~ 212 (383)
T 3ei3_B 149 SGSVIQVFAKTD--------------SWDYWYCCVDVSVSRQMLA-TGDSTGRLLLLGLDGHEIFKEKL-HKAKVTHAEF 212 (383)
T ss_dssp TSCEEEEEECCC--------------CSSCCEEEEEEETTTTEEE-EEETTSEEEEEETTSCEEEEEEC-SSSCEEEEEE
T ss_pred CCCceEEEeccC--------------CCCCCeEEEEECCCCCEEE-EECCCCCEEEEECCCCEEEEecc-CCCcEEEEEE
Confidence 876554443211 0112467888887666555 44455789999998776655543 3467889999
Q ss_pred eCCCCEEEEEeCCCCCCeEEEEecCC----CceEEEeeCCCCCceEEEEec-CCCEEEEEeCCCCeEEEEeCCC
Q psy13635 227 SPAHGYLFWSDWNEKRPKIERSLLNG----GERVLLVKDRLGWPNGITLDV-DNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 227 d~~~g~Ly~~d~~~~~~~I~~~~~dg----~~~~~~~~~~l~~P~giaid~-~~~~lY~~d~~~~~I~~~~~dG 295 (357)
+|....++++-... +.|...++.. ....... ..-....++++++ .+..|+ +-...+.|...++..
T Consensus 213 ~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~-~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 213 NPRCDWLMATSSVD--ATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLL-TTDQRNEIRVYSSYD 282 (383)
T ss_dssp CSSCTTEEEEEETT--SEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEE-EEESSSEEEEEETTB
T ss_pred CCCCCCEEEEEeCC--CEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEE-EEcCCCcEEEEECCC
Confidence 98765244444332 5787777764 2222222 2345678999987 444554 445567899998754
No 203
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.21 E-value=0.0022 Score=62.42 Aligned_cols=255 Identities=11% Similarity=-0.027 Sum_probs=150.6
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc-ceeEEEEeCCcCC-ceeEEEEc--CCCeEEEEeCCCCEEEEEE
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV-GSKHNVITNGLIT-PDGLAIDW--LTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~~~~-p~glavd~--~~~~ly~td~~~~~I~~~~ 145 (357)
...+.++++++.++.|..+. ++.|...+++.... .+....+...-.. +..+++.+ .++.|+.+ ..++.|...+
T Consensus 18 ~~~v~~~~~spdg~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~-~~dg~v~vw~ 94 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC--GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG-DESGKVIVWG 94 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE--TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEE-ETTSEEEEEE
T ss_pred cCceeEEEECCCCCEEEEec--CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEe-cCCCEEEEEe
Confidence 34677899999888888877 56788778774400 0123444444445 78999997 55555544 4578888888
Q ss_pred cCCC------ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC---CeEEEEEcCCCceEEEecC
Q psy13635 146 LDGK------KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT---DRIEVCRLEGTHRKVLVNT 216 (357)
Q Consensus 146 ~~g~------~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~---~~I~~~~~~g~~~~~~~~~ 216 (357)
+... ..+.+..- ...-.....+++.+.+..|+.+.... +.|...+ .+.... ....
T Consensus 95 ~~~~~~~~~~~~~~~~~~--------------~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~-~~~~ 158 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEF--------------QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLG-EVSG 158 (615)
T ss_dssp EEEEGGGTEEEEEEEEEE--------------ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEE-ECCS
T ss_pred CCCCcccccccccccchh--------------hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcce-eeec
Confidence 7422 11111100 00112467888888777777766543 3555554 233222 2333
Q ss_pred CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCC---CceEEEEecCCCEEEEEeCCCCeEEEEeC
Q psy13635 217 DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLG---WPNGITLDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 217 ~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~---~P~giaid~~~~~lY~~d~~~~~I~~~~~ 293 (357)
.......++++|.+..++.+-... +.|...+.........+...-. ....+++.+.+++.+++-...+.|...+.
T Consensus 159 ~~~~v~~~~~~~~~~~~l~~~~~d--~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 159 HSQRINACHLKQSRPMRSMTVGDD--GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG 236 (615)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETT--TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred CCccEEEEEECCCCCcEEEEEeCC--CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 445678999998755344443332 5888888765544444433333 56889998762444444445678999997
Q ss_pred CCCCeEEEe-c---CCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 294 DGNNRRELI-N---ENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 294 dG~~~~~i~-~---~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
........+ . ........+++.++..+++-...+.|...+..+++....+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp TTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 654443333 2 334455677764444444445567888888766776655543
No 204
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.21 E-value=0.0036 Score=57.87 Aligned_cols=266 Identities=11% Similarity=0.001 Sum_probs=151.5
Q ss_pred EEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeE
Q psy13635 44 LLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGL 122 (357)
Q Consensus 44 l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~gl 122 (357)
|+.+. ...++..|+..... ....... ....+..-..++.++.+-..++.|...++.... ....+.........+
T Consensus 71 l~~~~~d~~v~i~d~~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~~ 145 (420)
T 3vl1_A 71 LYKARLDGHDFLFNTIIRDG-SKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL---QREIDQAHVSEITKL 145 (420)
T ss_dssp EEEEEETTEEEEEECCSEET-TTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE---EEEETTSSSSCEEEE
T ss_pred EEEEEcCCcEEEEEecccce-eeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc---eeeecccccCccEEE
Confidence 44443 55688888765221 1111222 344443333345555555566788888887653 233333444667889
Q ss_pred EEEcCCCeEEEEeCCCCEEEEEEcCCCc-eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEE
Q psy13635 123 AIDWLTEKLYWTDSETNKLEVSSLDGKK-RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIE 201 (357)
Q Consensus 123 avd~~~~~ly~td~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~ 201 (357)
++.+.++ +.++-..++.|...++.... ...+... -....++++.+.+..|+ +....+.|.
T Consensus 146 ~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~h-----------------~~~v~~~~~~~~~~~l~-s~~~d~~v~ 206 (420)
T 3vl1_A 146 KFFPSGE-ALISSSQDMQLKIWSVKDGSNPRTLIGH-----------------RATVTDIAIIDRGRNVL-SASLDGTIR 206 (420)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTTCCCCEEEECC-----------------SSCEEEEEEETTTTEEE-EEETTSCEE
T ss_pred EECCCCC-EEEEEeCCCeEEEEeCCCCcCceEEcCC-----------------CCcEEEEEEcCCCCEEE-EEcCCCcEE
Confidence 9997554 55555567899999986443 3333211 12467788887665555 444556788
Q ss_pred EEEcCCCceEEEecC---CC---------------------CCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE
Q psy13635 202 VCRLEGTHRKVLVNT---DL---------------------VEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL 257 (357)
Q Consensus 202 ~~~~~g~~~~~~~~~---~~---------------------~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~ 257 (357)
..++........... .. .....++++|....|+.+... +.|...++.......
T Consensus 207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~ 283 (420)
T 3vl1_A 207 LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS---GVITVHNVFSKEQTI 283 (420)
T ss_dssp EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT---SCEEEEETTTCCEEE
T ss_pred EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC---CeEEEEECCCCceeE
Confidence 888764433322221 11 122334455653344444433 578888886654443
Q ss_pred EeeC-CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCC-C-eEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeC
Q psy13635 258 LVKD-RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGN-N-RRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 258 ~~~~-~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~-~-~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~ 334 (357)
.... .......+++++.+..++++-...+.|...++... . ...+..........+....+.++++-...+.|...+.
T Consensus 284 ~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 284 QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEE
T ss_pred EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEec
Confidence 3333 23456899998766635555556789999998653 3 3334332333445565667788888777788776665
Q ss_pred cc
Q psy13635 335 IT 336 (357)
Q Consensus 335 ~~ 336 (357)
.+
T Consensus 364 ~~ 365 (420)
T 3vl1_A 364 SD 365 (420)
T ss_dssp CC
T ss_pred cC
Confidence 33
No 205
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.21 E-value=0.0011 Score=67.00 Aligned_cols=245 Identities=11% Similarity=0.071 Sum_probs=133.4
Q ss_pred CCCCeEEEEEeC----------CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcce
Q psy13635 38 HVAAQMLLFATS----------KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGS 107 (357)
Q Consensus 38 ~~~~~~l~~~~~----------~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 107 (357)
++...+|+++.. ..++..|+.++ ....+..........+++|++.+|.++. ++.|+..+++++.
T Consensus 70 Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~-~~~~l~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~--- 143 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR-QLITEERIPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLP--- 143 (740)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT-EECCSSCCCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTSC---
T ss_pred CCCCCEEEEEECCeeeEEEccceEEEEEECCCC-cEEEcccCCCcceeeEECCCCCEEEEEE--CCeEEEEECCCCc---
Confidence 556667777775 45678998773 3333333345678889999888887663 3578888877654
Q ss_pred eEEEEeCC------------------cCCceeEEEEcCCCeEEEEeCCCC------------------------------
Q psy13635 108 KHNVITNG------------------LITPDGLAIDWLTEKLYWTDSETN------------------------------ 139 (357)
Q Consensus 108 ~~~~~~~~------------------~~~p~glavd~~~~~ly~td~~~~------------------------------ 139 (357)
...+...+ +....++++.|.++.|.++.....
T Consensus 144 ~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 12221112 122345788888887776532111
Q ss_pred -----EEEEEEcCC---C---ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE-EEEeCCCC--eEEEEEc
Q psy13635 140 -----KLEVSSLDG---K---KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL-YWTDTGTD--RIEVCRL 205 (357)
Q Consensus 140 -----~I~~~~~~g---~---~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l-Y~td~~~~--~I~~~~~ 205 (357)
+|...++++ . ....+.. |..+ ...-.....++..+.++.+ ++.+...+ .|..++.
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~-----~~~~------~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~ 292 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITA-----PASM------LIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDY 292 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECC-----CHHH------HTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEE
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecC-----CccC------CCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEEC
Confidence 233333333 2 1111100 0000 0000112344555544423 34444433 6888887
Q ss_pred CCCc-------eEEEe-cC--C-CC--CceEEEEeCCCCEEE-EEeCCCCCCeEEEEecCCCceEEEeeCCCCCceE-EE
Q psy13635 206 EGTH-------RKVLV-NT--D-LV--EPRAITLSPAHGYLF-WSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNG-IT 270 (357)
Q Consensus 206 ~g~~-------~~~~~-~~--~-~~--~P~giavd~~~g~Ly-~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~g-ia 270 (357)
++.. ...+. .. . .. .+...+++|.+..|+ |........+|+..+.+|...+.+.... ..... +.
T Consensus 293 ~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~-~~v~~~~~ 371 (740)
T 4a5s_A 293 DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGT-WEVIGIEA 371 (740)
T ss_dssp ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSS-SCEEEEEE
T ss_pred CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCC-EEEEEEEE
Confidence 7644 22221 11 1 11 145678898766665 5543322369999999998777665332 22233 33
Q ss_pred EecCCCEEEEEeCC------CCeEEEEeCCCCCeEEEe
Q psy13635 271 LDVDNEKLYWCDAK------TDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 271 id~~~~~lY~~d~~------~~~I~~~~~dG~~~~~i~ 302 (357)
.| ++.||++... ...|++++++|...+..+
T Consensus 372 ~d--~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~l 407 (740)
T 4a5s_A 372 LT--SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCL 407 (740)
T ss_dssp EC--SSEEEEEESCGGGCTTCBEEEEEETTEEEEEEES
T ss_pred Ee--CCEEEEEEecCCCCCceeEEEEEECCCCCcceee
Confidence 54 7889988754 357999999987654333
No 206
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.004 Score=63.29 Aligned_cols=265 Identities=10% Similarity=-0.024 Sum_probs=151.8
Q ss_pred EEEEeC-CcEEEEEcCCCCcceEecc-------------C--CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcce
Q psy13635 44 LLFATS-KDIRIANLSRPLKPVTIIK-------------D--LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGS 107 (357)
Q Consensus 44 l~~~~~-~~i~~~~~~~~~~~~~~~~-------------~--~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 107 (357)
|.++.. ..|.+++..+.. ...... . .....++..|. ++.||+. ...+.|.+++......
T Consensus 271 lWigt~~~Gl~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~lWig-t~~~Gl~~~~~~~~~~-- 345 (781)
T 3v9f_A 271 LWIATELNGIMILDLQQNQ-FLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNNIWIG-TWGGGINFISNAPPTF-- 345 (781)
T ss_dssp EEEEESSSCEEEEETTCC----------CEEECBCSSTTSBSSSCEEEEEECS-SCCEEEE-EBSSCEEEECSSCCSC--
T ss_pred EEEEeCCCCeEEECCCCCe-eeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCCEEEE-ecCCeEEEeCCCCCcc--
Confidence 444444 778888876532 211111 1 23467787776 5566554 4345678777765431
Q ss_pred eEEEE-------eCCc--CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCC
Q psy13635 108 KHNVI-------TNGL--ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHP 178 (357)
Q Consensus 108 ~~~~~-------~~~~--~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p 178 (357)
.... ..++ ....+++.|. .++||+.... +-|.+++......+.+.. +..+ .-...
T Consensus 346 -~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~~-~Gl~~~~~~~~~~~~~~~-----~~~~--------~~~~v 409 (781)
T 3v9f_A 346 -HTWSYSPTQMNESSLSNKVVSSVCDDG-QGKLWIGTDG-GGINVFENGKRVAIYNKE-----NREL--------LSNSV 409 (781)
T ss_dssp -EEEC----CCCSSCCSSSCEEEEEECT-TSCEEEEEBS-SCEEEEETTEEEEECC----------C--------CCSBE
T ss_pred -eeeccCccccccCCCCCcceEEEEEcC-CCCEEEEeCC-CcEEEEECCCCeEEEccC-----CCCC--------CCcce
Confidence 1211 1122 3467788884 6788876533 447777765432221110 0000 01245
Q ss_pred ceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC--CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceE
Q psy13635 179 DGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT--DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERV 256 (357)
Q Consensus 179 ~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~--~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~ 256 (357)
.+++.| ..+.||+.... +.+.+++......+..... .......|+.|+ .|.||++... .+.+.+.+.....
T Consensus 410 ~~i~~d-~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~~----Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 410 LCSLKD-SEGNLWFGTYL-GNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWIGTHA----GVFVIDLASKKVI 482 (781)
T ss_dssp EEEEEC-TTSCEEEEETT-EEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEEEETT----EEEEEESSSSSCC
T ss_pred EEEEEC-CCCCEEEEecc-CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEEEECC----ceEEEeCCCCeEE
Confidence 678888 56788876543 4688888765443333211 234677888886 5899888753 7888888765444
Q ss_pred EEeeCC-----CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecC-CC--CceEEEEEE-CCEEEEEeCCCC
Q psy13635 257 LLVKDR-----LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINE-NL--PHVFGISLL-GDYVYWTDWQRR 327 (357)
Q Consensus 257 ~~~~~~-----l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~-~~--~~p~gia~~-~~~ly~td~~~~ 327 (357)
...... ...+.+|+.| .+++||++..+. .+.+++.++...+.+... .+ ....+|..+ +|.||++.. .|
T Consensus 483 ~~~~~~~~~~~~~~i~~i~~d-~~g~lWigt~~~-Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~G 559 (781)
T 3v9f_A 483 HHYDTSNSQLLENFVRSIAQD-SEGRFWIGTFGG-GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EG 559 (781)
T ss_dssp EEECTTTSSCSCSCEEEEEEC-TTCCEEEEESSS-CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TE
T ss_pred ecccCcccccccceeEEEEEc-CCCCEEEEEcCC-CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CC
Confidence 433221 2456889998 688898887543 588888876655444321 22 245677777 578887765 34
Q ss_pred eEEEEeCccCce
Q psy13635 328 SIDRVNKITGND 339 (357)
Q Consensus 328 ~I~~~~~~~g~~ 339 (357)
-|.++++.+++.
T Consensus 560 lv~~~d~~~~~~ 571 (781)
T 3v9f_A 560 LVCFPSARNFDY 571 (781)
T ss_dssp EEEESCTTTCCC
T ss_pred ceEEECCCCCcE
Confidence 438888755543
No 207
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.20 E-value=0.0066 Score=64.76 Aligned_cols=276 Identities=9% Similarity=0.004 Sum_probs=170.9
Q ss_pred EEeecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 33 YALSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
+|++-++...+++.+. ...|+..|+..+..............+++|++.+..|..+ ..++.|...++.... ....
T Consensus 619 ~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~d~~v~vwd~~~~~---~~~~ 694 (1249)
T 3sfz_A 619 YHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATC-SADKKVKIWDSATGK---LVHT 694 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCC---EEEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEE-eCCCeEEEEECCCCc---eEEE
Confidence 3444455566666555 4569999987755444444566678999999876665544 456789988887653 2334
Q ss_pred EeCCcCCceeEEEEcC-CCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 112 ITNGLITPDGLAIDWL-TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 112 ~~~~~~~p~glavd~~-~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
+.........+++.+. .+.+..+....+.|...+++.......... .-.....+++.+.+..|
T Consensus 695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~----------------h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 695 YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG----------------HTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC----------------CSSCEEEEEECSSTTEE
T ss_pred EcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC----------------CCCCEEEEEEecCCCEE
Confidence 4444456778888764 344556666778899999876654333211 11246678888755544
Q ss_pred EEEeCCCCeEEEEEcCCCceE-EEecCC------------CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE
Q psy13635 191 YWTDTGTDRIEVCRLEGTHRK-VLVNTD------------LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL 257 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~~-~~~~~~------------~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~ 257 (357)
++....+.|...+....... .+.... ......++++|.+..+..+.. +.+...+........
T Consensus 759 -~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~----~~v~~~d~~~~~~~~ 833 (1249)
T 3sfz_A 759 -ASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK----NKVLLFDIHTSGLLA 833 (1249)
T ss_dssp -EEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET----TEEEEEETTTCCEEE
T ss_pred -EEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC----CcEEEEEecCCCcee
Confidence 45555678888887644322 221110 114557788887666666653 378788876655444
Q ss_pred Eee-CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 258 LVK-DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 258 ~~~-~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
... ........+++.+.+..+ ++-...+.|...+.+................++++. ++..+++-...+.|...+.
T Consensus 834 ~~~~~~~~~v~~~~~sp~~~~l-~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 834 EIHTGHHSTIQYCDFSPYDHLA-VIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp EEECSSSSCCCEEEECSSTTEE-EEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred EEcCCCCCceEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 333 334566889998655544 455567789999887655544444455567788886 3444555555677776653
No 208
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.19 E-value=0.00037 Score=70.55 Aligned_cols=295 Identities=10% Similarity=0.070 Sum_probs=154.2
Q ss_pred CCeEEEEEeCCcEEEEEcCCCCcceEeccC-CC----cEEEEEEEccCCEEEEEeCC--------CCeEEEEEcCCCCcc
Q psy13635 40 AAQMLLFATSKDIRIANLSRPLKPVTIIKD-LE----EGAAIDYYYKKSMVCWTDHG--------TEMISCCTFDGNNVG 106 (357)
Q Consensus 40 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~----~~~~i~~d~~~~~ly~~d~~--------~~~I~~~~~~g~~~~ 106 (357)
...+++ +....|+..|+.++....++... .. ....++++|++..|.++... .+.++..++.+..
T Consensus 27 dg~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~-- 103 (740)
T 4a5s_A 27 DHEYLY-KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-- 103 (740)
T ss_dssp SSEEEE-EETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE--
T ss_pred CCcEEE-EcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc--
Confidence 334444 44677999998775433332221 11 12346789988888766431 1456778887763
Q ss_pred eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCc--ceee--eeccCcccccCCceEE
Q psy13635 107 SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQP--RAIA--SYKLPTIEVEHPDGVA 182 (357)
Q Consensus 107 ~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p--~~i~--~~~~~~~~~~~p~gla 182 (357)
...+..........++.|.++.|.++. .+.|+..++++.....+...+.... .+.. ++ ..+-+....+++
T Consensus 104 --~~~l~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~--~ee~~~~~~~~~ 177 (740)
T 4a5s_A 104 --LITEERIPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVY--EEEVFSAYSALW 177 (740)
T ss_dssp --ECCSSCCCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHH--HHHTSSSSBCEE
T ss_pred --EEEcccCCCcceeeEECCCCCEEEEEE--CCeEEEEECCCCceEEEcCCCCccceecCcccccc--cchhcCCCcceE
Confidence 222333233456778888888887764 4678888876655444322111000 0000 00 000012223455
Q ss_pred EeCCCCeEEEEe--CC-------------------------------C--CeEEEEEcCC---C---ceEEEec-----C
Q psy13635 183 VDWVARNLYWTD--TG-------------------------------T--DRIEVCRLEG---T---HRKVLVN-----T 216 (357)
Q Consensus 183 vD~~~~~lY~td--~~-------------------------------~--~~I~~~~~~g---~---~~~~~~~-----~ 216 (357)
..|.+..|.++. .. . .+|...++++ . ....+.. .
T Consensus 178 wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~ 257 (740)
T 4a5s_A 178 WSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLI 257 (740)
T ss_dssp ECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHT
T ss_pred ECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCC
Confidence 655555554431 11 0 1466677766 4 2333321 0
Q ss_pred CCCCceEEEEeCCCCEEE-EEeCCCCCCeEEEEecCCCc-------eEEEe-eCC---CC--CceEEEEecCCCEEE-EE
Q psy13635 217 DLVEPRAITLSPAHGYLF-WSDWNEKRPKIERSLLNGGE-------RVLLV-KDR---LG--WPNGITLDVDNEKLY-WC 281 (357)
Q Consensus 217 ~~~~P~giavd~~~g~Ly-~~d~~~~~~~I~~~~~dg~~-------~~~~~-~~~---l~--~P~giaid~~~~~lY-~~ 281 (357)
.......++..|.+..++ +.....+...|...+.++.. ...+. ... +. .+...++.+++..|+ |.
T Consensus 258 ~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~ 337 (740)
T 4a5s_A 258 GDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKII 337 (740)
T ss_dssp SCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEE
T ss_pred CCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEE
Confidence 122345677888644233 33433222478888887654 22221 111 11 134567776666765 55
Q ss_pred e--CCCCeEEEEeCCCCCeEEEecCCCCceEE-EEEECCEEEEEeCC------CCeEEEEeCccCceeEEEe
Q psy13635 282 D--AKTDKIEMIDFDGNNRRELINENLPHVFG-ISLLGDYVYWTDWQ------RRSIDRVNKITGNDREVII 344 (357)
Q Consensus 282 d--~~~~~I~~~~~dG~~~~~i~~~~~~~p~g-ia~~~~~ly~td~~------~~~I~~~~~~~g~~~~~i~ 344 (357)
. .+...|+.++.+|...+.+... -..... +.++++.||++... ...|++++..+++..+.+.
T Consensus 338 s~~~G~~~l~~~~~~~~~~~~lT~g-~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt 408 (740)
T 4a5s_A 338 SNEEGYRHICYFQIDKKDCTFITKG-TWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLS 408 (740)
T ss_dssp ECTTSCEEEEEEETTCSSCEESCCS-SSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESS
T ss_pred EcCCCceEEEEEECCCCceEecccC-CEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeec
Confidence 3 3446799999998877655443 222233 33568899998765 3569999884333333443
No 209
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.19 E-value=0.0018 Score=58.37 Aligned_cols=249 Identities=4% Similarity=-0.062 Sum_probs=141.3
Q ss_pred CCCcEEEEEEEcc---CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC--CcCCceeEEEEcCC---CeEEEEeCCCCE
Q psy13635 69 DLEEGAAIDYYYK---KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN--GLITPDGLAIDWLT---EKLYWTDSETNK 140 (357)
Q Consensus 69 ~~~~~~~i~~d~~---~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~--~~~~p~glavd~~~---~~ly~td~~~~~ 140 (357)
......+++++|. ++.++++...++.|...+............... .-.....+++.+.. +.++++-..++.
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~ 96 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGI 96 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCE
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCE
Confidence 3456788999873 344444444455777777764431111111111 22456788888753 456666667889
Q ss_pred EEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEe---cCC
Q psy13635 141 LEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLV---NTD 217 (357)
Q Consensus 141 I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~---~~~ 217 (357)
|...++............ -.....+++.+.++.++++-...+.|...++......... ...
T Consensus 97 i~v~d~~~~~~~~~~~~~----------------~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 160 (366)
T 3k26_A 97 IRIINPITMQCIKHYVGH----------------GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGH 160 (366)
T ss_dssp EEEECTTTCCEEEEEESC----------------CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSC
T ss_pred EEEEEchhceEeeeecCC----------------CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccc
Confidence 999998754433322211 1256778888745666666666778999998755444443 234
Q ss_pred CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEE----------------------------EeeCCCCCceEE
Q psy13635 218 LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVL----------------------------LVKDRLGWPNGI 269 (357)
Q Consensus 218 ~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~----------------------------~~~~~l~~P~gi 269 (357)
...+..++++|....|+.+... +.|...++....... .....-.....+
T Consensus 161 ~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 237 (366)
T 3k26_A 161 RDEVLSADYDLLGEKIMSCGMD---HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 237 (366)
T ss_dssp SSCEEEEEECTTSSEEEEEETT---SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEE
T ss_pred cCceeEEEECCCCCEEEEecCC---CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEE
Confidence 4678899999976666666554 477777765422110 000022335677
Q ss_pred EEecCCCEEEEEeCCCCeEEEEeCCCCCe--------------EEEecCCCCceEEEEEE-C--CEEEEEeCCCCeEEEE
Q psy13635 270 TLDVDNEKLYWCDAKTDKIEMIDFDGNNR--------------RELINENLPHVFGISLL-G--DYVYWTDWQRRSIDRV 332 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~~I~~~~~dG~~~--------------~~i~~~~~~~p~gia~~-~--~~ly~td~~~~~I~~~ 332 (357)
+++ + .++++-...+.|...+...... .............+++. + +.+.++-...+.|...
T Consensus 238 ~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vw 314 (366)
T 3k26_A 238 RWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVW 314 (366)
T ss_dssp EEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEE
T ss_pred EEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEE
Confidence 775 3 3555555677888887654321 11111111223334433 2 4555555666788888
Q ss_pred eCccCce
Q psy13635 333 NKITGND 339 (357)
Q Consensus 333 ~~~~g~~ 339 (357)
+..+++.
T Consensus 315 d~~~~~~ 321 (366)
T 3k26_A 315 DLEVEDP 321 (366)
T ss_dssp ECCSSSG
T ss_pred ECCCCCC
Confidence 8766653
No 210
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.19 E-value=0.0022 Score=57.81 Aligned_cols=225 Identities=12% Similarity=0.052 Sum_probs=127.6
Q ss_pred CcEEEEEEEccCCEEEEEeC--------CCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC----C
Q psy13635 71 EEGAAIDYYYKKSMVCWTDH--------GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE----T 138 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~--------~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~----~ 138 (357)
..+....+ ++.+|+++-. ....|+.+++++.. ...+ .....+++.|.++.|+++... .
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~----~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA----RRFI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC----EEEE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc----eEEc----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 34445555 4567766521 13468888888764 2233 456778999888888877542 3
Q ss_pred CEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC----------------------
Q psy13635 139 NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG---------------------- 196 (357)
Q Consensus 139 ~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~---------------------- 196 (357)
..|+++++++.....+.... . ..++++.+.++.|+++...
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~-----------------~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAK-----------------N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp EEEEEEETTTTEEEEEEEES-----------------E-EEEEEECTTSSEEEEEEECCCC---------CCCC------
T ss_pred ceEEEEECCCCceEEEEcCC-----------------C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 45888888876555443211 1 4566777677777776421
Q ss_pred ----CCeEEEEEcCCCce-EEEecCCCCCceEEEEeCCCCEEEEEeCCCC------CCeEEEEecCCCceEEEeeCCCCC
Q psy13635 197 ----TDRIEVCRLEGTHR-KVLVNTDLVEPRAITLSPAHGYLFWSDWNEK------RPKIERSLLNGGERVLLVKDRLGW 265 (357)
Q Consensus 197 ----~~~I~~~~~~g~~~-~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~------~~~I~~~~~dg~~~~~~~~~~l~~ 265 (357)
...|++.++++... +.+.. . ....++++|. |.+|.+..... ...|+.++ .| ....+... ..
T Consensus 147 ~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spd-g~~~~~~~~~~~~~~~~~~~l~~~d-~~-~~~~l~~~--~~ 218 (347)
T 2gop_A 147 FDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRD-KIVVNVPHREIIPQYFKFWDIYIWE-DG-KEEKMFEK--VS 218 (347)
T ss_dssp ---CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETT-EEEEEEECCCSSCCSSCCEEEEEEE-TT-EEEEEEEE--ES
T ss_pred ccCccceEEEEECCCCeEEeeecC-C--CcccccCCCC-eEEEEEecccccccccccccEEEeC-CC-ceEEeccC--cc
Confidence 24788899887665 55543 2 6778999986 55554533210 24788888 33 33444332 22
Q ss_pred ceEEEEecCCCEEEEEeCC-------CCeEEEEeCCCCCeEEEecCCCCc-eEE-EEEECCEEEEEeCCCC--eEEEEeC
Q psy13635 266 PNGITLDVDNEKLYWCDAK-------TDKIEMIDFDGNNRRELINENLPH-VFG-ISLLGDYVYWTDWQRR--SIDRVNK 334 (357)
Q Consensus 266 P~giaid~~~~~lY~~d~~-------~~~I~~~~~dG~~~~~i~~~~~~~-p~g-ia~~~~~ly~td~~~~--~I~~~~~ 334 (357)
...+ .+++.+|+++... ...|+.++ .| ..+.+.. .... ... +++.++ +|++....+ .|+ ++
T Consensus 219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~-~~~~l~~-~~~~~~~~~~~~sdg-~~~~~~~~~~~~l~-~~- 290 (347)
T 2gop_A 219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-GK-EVMGILD-EVDRGVGQAKIKDGK-VYFTLFEEGSVNLY-IW- 290 (347)
T ss_dssp EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-SS-CEEESST-TCCSEEEEEEEETTE-EEEEEEETTEEEEE-EE-
T ss_pred eeeE--CCCCCEEEEEEccccCCccccceEEEEC-CC-ceEeccc-cCCcccCCccEEcCc-EEEEEecCCcEEEE-Ec-
Confidence 2223 5667777766532 35788888 44 3333332 2222 233 444433 666544333 355 55
Q ss_pred ccCcee
Q psy13635 335 ITGNDR 340 (357)
Q Consensus 335 ~~g~~~ 340 (357)
+|+..
T Consensus 291 -~g~~~ 295 (347)
T 2gop_A 291 -DGEIK 295 (347)
T ss_dssp -SSSEE
T ss_pred -CCceE
Confidence 45543
No 211
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.17 E-value=0.0012 Score=59.58 Aligned_cols=239 Identities=10% Similarity=0.031 Sum_probs=131.9
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCC----CCeEEEEEcCCCCcceeEEEEeCCcCCceeEEE
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHG----TEMISCCTFDGNNVGSKHNVITNGLITPDGLAI 124 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~----~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glav 124 (357)
...|+.++++++. ...+ .....+.++|++..|+++... ...|+.+++++.. ...+.... . +.++++
T Consensus 42 ~~~l~~~d~~~~~-~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~---~~~l~~~~-~-~~~~~w 111 (347)
T 2gop_A 42 ENTIVIENLKNNA-RRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS---SKKILEAK-N-IRSLEW 111 (347)
T ss_dssp EEEEEEEETTTCC-EEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE---EEEEEEES-E-EEEEEE
T ss_pred cceEEEEeCCCCc-eEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc---eEEEEcCC-C-ccceeE
Confidence 3468888987743 3333 456778899988888877543 2359999988763 22332222 2 778888
Q ss_pred EcCCCeEEEEeCC--------------------------CCEEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccC
Q psy13635 125 DWLTEKLYWTDSE--------------------------TNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEH 177 (357)
Q Consensus 125 d~~~~~ly~td~~--------------------------~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~ 177 (357)
.+.++.|+++... ..+|++.++++... +.+.. . .
T Consensus 112 spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~------------------~ 172 (347)
T 2gop_A 112 NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P------------------R 172 (347)
T ss_dssp CTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E------------------T
T ss_pred CCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C------------------C
Confidence 8888888887522 35788888876654 44321 1 3
Q ss_pred CceEEEeCCCCeEEEEeCC--------CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCC-----CCCe
Q psy13635 178 PDGVAVDWVARNLYWTDTG--------TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNE-----KRPK 244 (357)
Q Consensus 178 p~glavD~~~~~lY~td~~--------~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~-----~~~~ 244 (357)
...+++.+.+ .+|.+... ...|+.++ .|. .+.+... .... .++|.+.+|+++.... ....
T Consensus 173 ~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~--~~~~--~~spdg~~l~~~~~~~~~~~~~~~~ 245 (347)
T 2gop_A 173 FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMFEK--VSFY--AVDSDGERILLYGKPEKKYMSEHNK 245 (347)
T ss_dssp TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEEEE--ESEE--EEEECSSCEEEEECCSSSCCCSSCE
T ss_pred cccccCCCCe-EEEEEecccccccccccccEEEeC-CCc-eEEeccC--ccee--eECCCCCEEEEEEccccCCccccce
Confidence 4556666544 44444332 23677777 443 3333332 2222 2377666777765432 1258
Q ss_pred EEEEecCCCceEEEeeCCCCCceE-EEEecCCCEEEEEeCC--CCeEEEEeCCCCCeEEEecCCCCceEEEEEECCEEEE
Q psy13635 245 IERSLLNGGERVLLVKDRLGWPNG-ITLDVDNEKLYWCDAK--TDKIEMIDFDGNNRRELINENLPHVFGISLLGDYVYW 321 (357)
Q Consensus 245 I~~~~~dg~~~~~~~~~~l~~P~g-iaid~~~~~lY~~d~~--~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~~~ly~ 321 (357)
|+..+ .| ....+....-..... ++++ ++ +|++... ..+|+ ++ +|.. ..+.. .-....++++.. .+++
T Consensus 246 l~~~d-~~-~~~~l~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~-~g~~-~~~~~-~~~~v~~~~~s~-~~~~ 315 (347)
T 2gop_A 246 LYIYD-GK-EVMGILDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IW-DGEI-KPIAK-GRHWIMGFDVDE-IVVY 315 (347)
T ss_dssp EEEEC-SS-CEEESSTTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EE-SSSE-EEEEC-SSSEEEEEEESS-SEEE
T ss_pred EEEEC-CC-ceEeccccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-Ec-CCce-EEEec-CCCeEEeeeeeC-cEEE
Confidence 88888 43 333333221122333 5664 44 6665433 34566 66 5543 33443 233445666656 5544
Q ss_pred E-eCCC--CeEEEEe
Q psy13635 322 T-DWQR--RSIDRVN 333 (357)
Q Consensus 322 t-d~~~--~~I~~~~ 333 (357)
+ .... .+|+.++
T Consensus 316 ~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 316 LKETATRLRELFTWD 330 (347)
T ss_dssp EEECSSSCCEEEEES
T ss_pred EEcCCCChHHheEeC
Confidence 3 3222 2577776
No 212
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.16 E-value=0.0058 Score=65.19 Aligned_cols=245 Identities=9% Similarity=0.022 Sum_probs=147.6
Q ss_pred eecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccC-CEEEEEeCCCCeEEEEEcCCCCcceeEEEE
Q psy13635 35 LSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNVI 112 (357)
Q Consensus 35 ~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 112 (357)
++-++...+++.+. ...|+..|+..+...............+++.+.. +.+..+...++.|...++.... ....+
T Consensus 663 ~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~ 739 (1249)
T 3sfz_A 663 CAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTM 739 (1249)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEE
T ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhhee
Confidence 33344455666555 4568899997754444444566678889998753 3455556667788888887664 23344
Q ss_pred eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecC-CCCcceeeeeccCcccccCCceEEEeCCCCeEE
Q psy13635 113 TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWED-IDQPRAIASYKLPTIEVEHPDGVAVDWVARNLY 191 (357)
Q Consensus 113 ~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~-~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY 191 (357)
......+..+++.+.++ ..++-...+.|...++............ ........ +......+..+++.+.+..+.
T Consensus 740 ~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~s~dg~~l~ 814 (1249)
T 3sfz_A 740 FGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDP----PEDVEVIVKCCSWSADGDKII 814 (1249)
T ss_dssp CCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC------------CCCCCBCCCCBCTTSSEEE
T ss_pred cCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCc----cccccceEEEEEECCCCCEEE
Confidence 44445678899997544 5556666789999988655432222111 00000000 001112455667777666666
Q ss_pred EEeCCCCeEEEEEcCCCce-EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEE
Q psy13635 192 WTDTGTDRIEVCRLEGTHR-KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGIT 270 (357)
Q Consensus 192 ~td~~~~~I~~~~~~g~~~-~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gia 270 (357)
.+. .+.+...+...... ..+..........++++|.+..+..+... +.|...+.+................+++
T Consensus 815 ~~~--~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~h~~~v~~v~ 889 (1249)
T 3sfz_A 815 VAA--KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ---YCVELWNIDSRLKVADCRGHLSWVHGVM 889 (1249)
T ss_dssp EEE--TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS---SCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEc--CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceeeecCCCccceEEEE
Confidence 665 36788888765443 33333445677899999976666665544 5788888877655555555556678999
Q ss_pred EecCCCEEEEEeCCCCeEEEEeC
Q psy13635 271 LDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 271 id~~~~~lY~~d~~~~~I~~~~~ 293 (357)
+.+.+..|+.+ ...+.|...+.
T Consensus 890 ~spdg~~l~s~-s~dg~v~vw~~ 911 (1249)
T 3sfz_A 890 FSPDGSSFLTA-SDDQTIRVWET 911 (1249)
T ss_dssp ECTTSSEEEEE-ETTSCEEEEEH
T ss_pred ECCCCCEEEEE-eCCCeEEEEEc
Confidence 98655555444 44566666653
No 213
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.14 E-value=0.0047 Score=56.34 Aligned_cols=274 Identities=7% Similarity=-0.012 Sum_probs=155.2
Q ss_pred eecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc---ceeEE
Q psy13635 35 LSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV---GSKHN 110 (357)
Q Consensus 35 ~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~---~~~~~ 110 (357)
+.-++...+|+-+. +..|+..|..................++++.+.+.. ..+-..++.+...++..... .....
T Consensus 70 ~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~-lasg~~d~~i~v~~~~~~~~~~~~~~~~ 148 (354)
T 2pbi_B 70 MDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCA-IACGGLDNKCSVYPLTFDKNENMAAKKK 148 (354)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSE-EEEESTTSEEEEEECCCCTTCCSGGGCE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCE-EEEeeCCCCEEEEEEeccccccccccce
Confidence 33344445555554 456888887664444444444556788999986554 44555666776666543210 01122
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC-CCe
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV-ARN 189 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~-~~~ 189 (357)
.+.........+++.+.+..| ++-+..+.|...++........+... -.....+++.+. .+.
T Consensus 149 ~~~~h~~~v~~~~~~~~~~~l-~t~s~D~~v~lwd~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 149 SVAMHTNYLSACSFTNSDMQI-LTASGDGTCALWDVESGQLLQSFHGH----------------GADVLCLDLAPSETGN 211 (354)
T ss_dssp EEEECSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCCEEEEEECC----------------SSCEEEEEECCCSSCC
T ss_pred eeeccCCcEEEEEEeCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEcCC----------------CCCeEEEEEEeCCCCC
Confidence 222233456778888655544 45556789999998654432222111 012345566543 345
Q ss_pred EEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC--CCCce
Q psy13635 190 LYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR--LGWPN 267 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~--l~~P~ 267 (357)
++++-...+.|...++.................+++++|....|..+... +.|...++............ .....
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D---~~v~lwd~~~~~~~~~~~~~~~~~~~~ 288 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDD---ATCRLYDLRADREVAIYSKESIIFGAS 288 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCTTCCSCEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEEEcCCCccccee
Confidence 66666667789998887544433333344567899999875555555443 57777787655444443321 23457
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEE
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSID 330 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~ 330 (357)
.+++.+.+..| .+-...+.|...+.........+...-.....+++. ++..+.+-...+.|.
T Consensus 289 ~~~~s~~g~~l-~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 289 SVDFSLSGRLL-FAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp EEEECTTSSEE-EEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EEEEeCCCCEE-EEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 88888655444 444456788888874433333333344556677776 344444444445554
No 214
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.12 E-value=0.0021 Score=58.85 Aligned_cols=209 Identities=11% Similarity=0.077 Sum_probs=124.6
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE----------eCCcCCceeEEEEcCCCeEEEEeCC
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI----------TNGLITPDGLAIDWLTEKLYWTDSE 137 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~----------~~~~~~p~glavd~~~~~ly~td~~ 137 (357)
..-....++++++.++.+..+-..++.|...+++........... ...-..+..+++.+.++.++++-..
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 345578899999834555555556678888888766421111100 0133457888998756667777777
Q ss_pred CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC--CCeEEEEeCCCCeEEEEEcCCCceEEEec
Q psy13635 138 TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV--ARNLYWTDTGTDRIEVCRLEGTHRKVLVN 215 (357)
Q Consensus 138 ~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~--~~~lY~td~~~~~I~~~~~~g~~~~~~~~ 215 (357)
.+.|...+++........... .....+++.+. ++.++++....+.|...++..........
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 183 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFE-----------------ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ 183 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECS-----------------SCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC
T ss_pred CCeEEEeeCCCCccceeccCC-----------------CceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec
Confidence 889999998876554433211 12344555443 23355555556788888887544433333
Q ss_pred CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce-EEEe---------------eCCCCCceEEEEecCCCEEE
Q psy13635 216 TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER-VLLV---------------KDRLGWPNGITLDVDNEKLY 279 (357)
Q Consensus 216 ~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~-~~~~---------------~~~l~~P~giaid~~~~~lY 279 (357)
........++++|....++++-... +.|...++..... ...+ ...-....++++.+.+..|+
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 261 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASAD--SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL 261 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETT--SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCC--CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEE
Confidence 3445678999998766555444332 4777777654321 1111 11223467899986555555
Q ss_pred EEeCCCCeEEEEeCCCC
Q psy13635 280 WCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 280 ~~d~~~~~I~~~~~dG~ 296 (357)
.+. ..+.|...++...
T Consensus 262 ~~~-~dg~i~vwd~~~~ 277 (408)
T 4a11_B 262 TVG-TDNRMRLWNSSNG 277 (408)
T ss_dssp EEE-TTSCEEEEETTTC
T ss_pred Eec-CCCeEEEEECCCC
Confidence 554 5678888887653
No 215
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.0049 Score=55.74 Aligned_cols=237 Identities=9% Similarity=0.003 Sum_probs=134.8
Q ss_pred cCCCCeEEEEEe-CCcEEEEEcCCC--CcceEeccCCCcEEEEEEEcc-CCEEEEEeCCCCeEEEEEcCCCCcceeEEEE
Q psy13635 37 HHVAAQMLLFAT-SKDIRIANLSRP--LKPVTIIKDLEEGAAIDYYYK-KSMVCWTDHGTEMISCCTFDGNNVGSKHNVI 112 (357)
Q Consensus 37 ~~~~~~~l~~~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~i~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 112 (357)
-++...+|+.+. ...|+..++.+. ..............++++.+. ++.++.+-..++.|...++..... ......
T Consensus 19 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~ 97 (379)
T 3jrp_A 19 LDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW-SQIAVH 97 (379)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE-EEEEEE
T ss_pred EcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce-eEeeee
Confidence 344555666665 456888887642 111222334556789999765 144444545567788888776520 012233
Q ss_pred eCCcCCceeEEEEcCC-CeEEEEeCCCCEEEEEEcCCCc--eEEEEecCCCCcceeeeeccCcccccCCceEEEeCC---
Q psy13635 113 TNGLITPDGLAIDWLT-EKLYWTDSETNKLEVSSLDGKK--RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV--- 186 (357)
Q Consensus 113 ~~~~~~p~glavd~~~-~~ly~td~~~~~I~~~~~~g~~--~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~--- 186 (357)
.........+++.+.. +.++++-...+.|...++.... ........ ......+++.+.
T Consensus 98 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 98 AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIE 161 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC----------------TTCEEEEEECCCC--
T ss_pred cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC----------------CCceEEEEEcCcccc
Confidence 3344567889998762 4555565667899999887652 22222111 123456667664
Q ss_pred ---------CCeEEEEeCCCCeEEEEEcCCCc-eE---EEecCCCCCceEEEEeCC---CCEEEEEeCCCCCCeEEEEec
Q psy13635 187 ---------ARNLYWTDTGTDRIEVCRLEGTH-RK---VLVNTDLVEPRAITLSPA---HGYLFWSDWNEKRPKIERSLL 250 (357)
Q Consensus 187 ---------~~~lY~td~~~~~I~~~~~~g~~-~~---~~~~~~~~~P~giavd~~---~g~Ly~~d~~~~~~~I~~~~~ 250 (357)
++.++++....+.|...++.... .. ............++++|. ...|+.+... +.|...++
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d---g~i~iwd~ 238 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD---RTCIIWTQ 238 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT---SCEEEEEE
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC---CEEEEEeC
Confidence 45566666666778888776432 11 122223456789999987 3444444443 46766666
Q ss_pred CCCc---eEEEeeC--CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 251 NGGE---RVLLVKD--RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 251 dg~~---~~~~~~~--~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
+... ...+... .......+++++.+..|+.+.. .+.|...+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~ 286 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKEN 286 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES-SSSEEEEEEE
T ss_pred CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC-CCcEEEEeCC
Confidence 6542 2233221 2234578899876666666554 5667666654
No 216
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.11 E-value=0.0048 Score=55.51 Aligned_cols=272 Identities=7% Similarity=-0.048 Sum_probs=153.7
Q ss_pred CeEEEEE-eCCcEEEEEcCCCCcceEecc-----CCCcEEEEEEEccC---CEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 41 AQMLLFA-TSKDIRIANLSRPLKPVTIIK-----DLEEGAAIDYYYKK---SMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 41 ~~~l~~~-~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~i~~d~~~---~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
.+.++.+ ....|+..++........+.. ......++++.+.. +.++.+-..++.|...++.... ....
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---~~~~ 110 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ---CIKH 110 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC---EEEE
T ss_pred CceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce---Eeee
Confidence 3334443 355688888875333322221 23568899998863 4666676677889999887653 2334
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEE
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLY 191 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY 191 (357)
+...-.....+++.+.++.++++-...+.|...++............ ...-..+..+++++.+..|+
T Consensus 111 ~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 111 YVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV-------------EGHRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp EESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST-------------TSCSSCEEEEEECTTSSEEE
T ss_pred ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc-------------ccccCceeEEEECCCCCEEE
Confidence 44445678889998756666667667889999998765443332110 01113567888887665555
Q ss_pred EEeCCCCeEEEEEcCCCceEEE----------------------------ecCCCCCceEEEEeCCCCEEEEEeCCCCCC
Q psy13635 192 WTDTGTDRIEVCRLEGTHRKVL----------------------------VNTDLVEPRAITLSPAHGYLFWSDWNEKRP 243 (357)
Q Consensus 192 ~td~~~~~I~~~~~~g~~~~~~----------------------------~~~~~~~P~giavd~~~g~Ly~~d~~~~~~ 243 (357)
. -...+.|...++........ ..........++++ ...|..+... +
T Consensus 178 ~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---~ 251 (366)
T 3k26_A 178 S-CGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCE---N 251 (366)
T ss_dssp E-EETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSS---S
T ss_pred E-ecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecC---C
Confidence 4 44457888888764321100 00022345677777 3444444333 4
Q ss_pred eEEEEecCCCce--------------EEEeeCCCCCceEEEEecC-CCEEEEEeCCCCeEEEEeCCCCCe----EEEecC
Q psy13635 244 KIERSLLNGGER--------------VLLVKDRLGWPNGITLDVD-NEKLYWCDAKTDKIEMIDFDGNNR----RELINE 304 (357)
Q Consensus 244 ~I~~~~~dg~~~--------------~~~~~~~l~~P~giaid~~-~~~lY~~d~~~~~I~~~~~dG~~~----~~i~~~ 304 (357)
.|...++..... .......-.....+++.+. ++++.++-...+.|...+.+.... ...+..
T Consensus 252 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 331 (366)
T 3k26_A 252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH 331 (366)
T ss_dssp EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECC
T ss_pred EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcc
Confidence 677666654322 1122222234556777654 144455556678899999875431 112222
Q ss_pred C--CCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 305 N--LPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 305 ~--~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
. ......+++. ++.+.++-...+.|+..+.
T Consensus 332 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 332 HKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred cccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 2 3456778876 3444445445567766554
No 217
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.10 E-value=0.013 Score=59.77 Aligned_cols=263 Identities=11% Similarity=0.011 Sum_probs=153.8
Q ss_pred eEEEEEeCCcEEEEEcCCCCcceEecc-----C--CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC
Q psy13635 42 QMLLFATSKDIRIANLSRPLKPVTIIK-----D--LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN 114 (357)
Q Consensus 42 ~~l~~~~~~~i~~~~~~~~~~~~~~~~-----~--~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 114 (357)
..++-+....|.+++... ..+..... . .....++..|. ++.||+.. ..+.|.+++..... .......
T Consensus 322 ~lWigt~~~Gl~~~~~~~-~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~lWiGt-~~~Gl~~~~~~~~~---~~~~~~~ 395 (795)
T 4a2l_A 322 GMWLGTYFGGLNYYHPIR-NRFKNIRNIPYKNSLSDNVVSCIVEDK-DKNLWIGT-NDGGLNLYNPITQR---FTSYTLQ 395 (795)
T ss_dssp CEEEEESSSCEEEECGGG-GSSEEECCCTTSSSCSCSSEEEEEECT-TSCEEEEE-SSSCEEEECTTTCC---EEEECCC
T ss_pred CEEEEECCCCeEEeCCCc-ccceEEcCCCCCCCCCCCeeEEEEECC-CCCEEEEE-CCCCeEEEcCCCCc---EEEEecC
Confidence 333333345677776544 22332211 1 23467887775 56676654 34468888776543 1222111
Q ss_pred ------C--cCCceeEEEEcCCCe-EEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeC
Q psy13635 115 ------G--LITPDGLAIDWLTEK-LYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDW 185 (357)
Q Consensus 115 ------~--~~~p~glavd~~~~~-ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~ 185 (357)
+ .....+++.|. .++ ||+... .+.|.+++.++...+.+.... +. + .......++.|
T Consensus 396 ~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~-~~Gl~~~d~~~~~~~~~~~~~---~~-l--------~~~~v~~i~~d- 460 (795)
T 4a2l_A 396 EDESARGIGSNNIKAVYVDE-KKSLVYIGTH-AGGLSILHRNSGQVENFNQRN---SQ-L--------VNENVYAILPD- 460 (795)
T ss_dssp ------CCSCSCEEEEEEET-TTTEEEEEET-TTEEEEEETTTCCEEEECTTT---SC-C--------SCSCEEEEEEC-
T ss_pred CCCcccCCCCccEEEEEEcC-CCCEEEEEeC-cCceeEEeCCCCcEEEeecCC---CC-c--------CCCeeEEEEEC-
Confidence 1 24567888884 677 666543 456888888765444332110 00 0 11245678888
Q ss_pred CCCeEEEEeCCCCeEEEEEcCCCceEEEecC----C--CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe
Q psy13635 186 VARNLYWTDTGTDRIEVCRLEGTHRKVLVNT----D--LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV 259 (357)
Q Consensus 186 ~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~----~--~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~ 259 (357)
..++||++.. +.+.+++++.......... . ......+..|+ .|.||++..+ .+.+.+.++... .+.
T Consensus 461 ~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~----Gl~~~~~~~~~~-~~~ 532 (795)
T 4a2l_A 461 GEGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGEE----GLSVFKQEGLDI-QKA 532 (795)
T ss_dssp SSSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEESS----CEEEEEEETTEE-EEC
T ss_pred CCCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECC-CCCEEEEeCC----ceEEEeCCCCeE-EEe
Confidence 4678888776 4588888876544433221 1 24567888996 5889888763 688888765543 222
Q ss_pred e----CCC--CCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec-CCC--CceEEEEEE-CCEEEEEeCCCCeE
Q psy13635 260 K----DRL--GWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN-ENL--PHVFGISLL-GDYVYWTDWQRRSI 329 (357)
Q Consensus 260 ~----~~l--~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~-~~~--~~p~gia~~-~~~ly~td~~~~~I 329 (357)
. .++ ....+|..| .+++||++..+ .+.+++.+....+.+-. .++ ....++..+ +|.||++. .+.|
T Consensus 533 ~~~~~~~l~~~~i~~i~~d-~~g~lWigT~~--Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl 607 (795)
T 4a2l_A 533 SILPVSNVTKLFTNCIYEA-SNGIIWVGTRE--GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGI 607 (795)
T ss_dssp CCSCSCGGGGSCEEEEEEC-TTSCEEEEESS--CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEE
T ss_pred cCCCCCCCCCCeeEEEEEC-CCCCEEEEeCC--CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCce
Confidence 1 111 235688888 67889888754 68888886654433322 122 245677777 58888876 4578
Q ss_pred EEEeCccCc
Q psy13635 330 DRVNKITGN 338 (357)
Q Consensus 330 ~~~~~~~g~ 338 (357)
.++++.+++
T Consensus 608 ~~~~~~~~~ 616 (795)
T 4a2l_A 608 SCFNPETEK 616 (795)
T ss_dssp EEEETTTTE
T ss_pred EEEcCCCCc
Confidence 889885444
No 218
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.09 E-value=0.0011 Score=66.97 Aligned_cols=242 Identities=11% Similarity=0.118 Sum_probs=142.6
Q ss_pred EeecCCCCeEEEEEeC------CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCC-------------Ce
Q psy13635 34 ALSHHVAAQMLLFATS------KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGT-------------EM 94 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~-------------~~ 94 (357)
+.+-++....|.++.. ..|+.+|+.++.......... ...++++.++ +.||++.... ..
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCCCCE
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCCCCE
Confidence 3455566667777663 369999998854333222111 1136778888 8998886432 35
Q ss_pred EEEEEcCCCCcceeEEEEeCCcC---CceeEEEEcCCCeEEEEeC----CCCEEEEEEcCCC--c-eEEEEecCCCCcce
Q psy13635 95 ISCCTFDGNNVGSKHNVITNGLI---TPDGLAIDWLTEKLYWTDS----ETNKLEVSSLDGK--K-RKVLYWEDIDQPRA 164 (357)
Q Consensus 95 I~~~~~~g~~~~~~~~~~~~~~~---~p~glavd~~~~~ly~td~----~~~~I~~~~~~g~--~-~~~~~~~~~~~p~~ 164 (357)
|++.++.+.. ....++...-. ...++++.+.++.|+++.. ....|+..++++. . .+.+....
T Consensus 245 v~~~~lgt~~--~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~------ 316 (741)
T 1yr2_A 245 VWLHRLGTPQ--SADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL------ 316 (741)
T ss_dssp EEEEETTSCG--GGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS------
T ss_pred EEEEECCCCc--hhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC------
Confidence 8888886543 11223333222 2457888887777877653 2468998888765 3 33333111
Q ss_pred eeeeccCcccccCCceEEEeCCCCeEEEEeCC---CCeEEEEEcCC--CceEEEecCCCCCceEEEEeCCCCEEEEEeCC
Q psy13635 165 IASYKLPTIEVEHPDGVAVDWVARNLYWTDTG---TDRIEVCRLEG--THRKVLVNTDLVEPRAITLSPAHGYLFWSDWN 239 (357)
Q Consensus 165 i~~~~~~~~~~~~p~glavD~~~~~lY~td~~---~~~I~~~~~~g--~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~ 239 (357)
...... +++.++.||+.... ..+|.++++++ ...+.++...-....+++++ ++.|+++...
T Consensus 317 -----------~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~ 382 (741)
T 1yr2_A 317 -----------KAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIH 382 (741)
T ss_dssp -----------SSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEE
T ss_pred -----------CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEE
Confidence 011111 34567888876542 35799999887 34455554433334566666 5778877654
Q ss_pred CCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC---CCCeEEEEeCCCCCeE
Q psy13635 240 EKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA---KTDKIEMIDFDGNNRR 299 (357)
Q Consensus 240 ~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~---~~~~I~~~~~dG~~~~ 299 (357)
....+|+..+++|.....+.........+++.++.+..|+++-. ..+.|+.+++++...+
T Consensus 383 dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 383 DAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTT 445 (741)
T ss_dssp TTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred CCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 32358888888877555443222334567777766666765432 3367899998765543
No 219
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.0047 Score=54.29 Aligned_cols=252 Identities=10% Similarity=0.006 Sum_probs=144.7
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
......++++ +.++.|+ +-..++.|...++++.. ........-.....+++++.++.|+. -..++.|...++..
T Consensus 17 h~~~v~~~~~-~~~~~l~-s~~~dg~v~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~~~~~~ 90 (313)
T 3odt_A 17 HDQDVRDVVA-VDDSKVA-SVSRDGTVRLWSKDDQW---LGTVVYTGQGFLNSVCYDSEKELLLF-GGKDTMINGVPLFA 90 (313)
T ss_dssp CSSCEEEEEE-EETTEEE-EEETTSEEEEEEESSSE---EEEEEEECSSCEEEEEEETTTTEEEE-EETTSCEEEEETTC
T ss_pred CCCCcEEEEe-cCCCEEE-EEEcCCcEEEEECCCCE---EEEEeecCCccEEEEEECCCCCEEEE-ecCCCeEEEEEeee
Confidence 3456778888 6566655 44556788888886653 23344444567889999986555544 44567788777654
Q ss_pred Cce-E-EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEE
Q psy13635 149 KKR-K-VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITL 226 (357)
Q Consensus 149 ~~~-~-~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giav 226 (357)
... + ..... ..-.....++++ ++. +++-...+.|...+ .+.....+. ........+++
T Consensus 91 ~~~~~~~~~~~---------------~~~~~i~~~~~~--~~~-l~~~~~d~~i~~~d-~~~~~~~~~-~~~~~v~~~~~ 150 (313)
T 3odt_A 91 TSGEDPLYTLI---------------GHQGNVCSLSFQ--DGV-VISGSWDKTAKVWK-EGSLVYNLQ-AHNASVWDAKV 150 (313)
T ss_dssp CTTSCC-CEEC---------------CCSSCEEEEEEE--TTE-EEEEETTSEEEEEE-TTEEEEEEE-CCSSCEEEEEE
T ss_pred cCCCCcccchh---------------hcccCEEEEEec--CCE-EEEEeCCCCEEEEc-CCcEEEecc-cCCCceeEEEE
Confidence 321 1 00000 011234556664 344 44545557788777 443333332 33456678888
Q ss_pred eC-CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCC
Q psy13635 227 SP-AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINEN 305 (357)
Q Consensus 227 d~-~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~ 305 (357)
.+ ....++.+... +.|...+. +.....+....-.....+++.+ ++. +++-...+.|...+.............
T Consensus 151 ~~~~~~~l~~~~~d---~~i~i~d~-~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~ 224 (313)
T 3odt_A 151 VSFSENKFLTASAD---KTIKLWQN-DKVIKTFSGIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGH 224 (313)
T ss_dssp EETTTTEEEEEETT---SCEEEEET-TEEEEEECSSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ccCCCCEEEEEECC---CCEEEEec-CceEEEEeccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcC
Confidence 77 44555555444 46766662 2222222222344567888874 556 445556778999998654443333334
Q ss_pred CCceEEEEEEC-CEEEEEeCCCCeEEEEeCccCceeEEEecccCCceee
Q psy13635 306 LPHVFGISLLG-DYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTR 353 (357)
Q Consensus 306 ~~~p~gia~~~-~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i 353 (357)
......+++.. +. +++-...+.|...+..+++....+.........+
T Consensus 225 ~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~ 272 (313)
T 3odt_A 225 ESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSV 272 (313)
T ss_dssp SSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEE
T ss_pred CceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEeccCceEEEE
Confidence 55667788874 44 4455566888888887787776665544344333
No 220
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.07 E-value=0.0059 Score=55.20 Aligned_cols=249 Identities=7% Similarity=0.034 Sum_probs=138.3
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC-CCeEEEEeCCCCEEEEEEcCC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL-TEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~-~~~ly~td~~~~~I~~~~~~g 148 (357)
.....++++++.+..|..+ ..++.|...++++... .....+...-.....+++.+. .+.++++-..++.|...+++.
T Consensus 11 ~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATC-SSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp CCCEEEEEECSSSSEEEEE-ETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred cccEEEEEEcCCCCEEEEE-ECCCcEEEEecCCCcc-eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence 3467788898876666544 4456777777764320 112233333445677888654 145555555678888888876
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC-CeEEEEeCCCCeEEEEEcCCC--ceEEEecCCCCCceEEE
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA-RNLYWTDTGTDRIEVCRLEGT--HRKVLVNTDLVEPRAIT 225 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~-~~lY~td~~~~~I~~~~~~g~--~~~~~~~~~~~~P~gia 225 (357)
.....+... ...-.....+++.+.. +.++++-...+.|...++... ...............++
T Consensus 89 ~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 89 GRWSQIAVH--------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp TEEEEEEEE--------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEE
T ss_pred CceeEeeee--------------cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEE
Confidence 542222111 0111246678888662 444445555678888887754 22223333445678899
Q ss_pred EeCC-------------CCEEEEEeCCCCCCeEEEEecCCCceE-E---EeeCCCCCceEEEEecCC--CEEEEEeCCCC
Q psy13635 226 LSPA-------------HGYLFWSDWNEKRPKIERSLLNGGERV-L---LVKDRLGWPNGITLDVDN--EKLYWCDAKTD 286 (357)
Q Consensus 226 vd~~-------------~g~Ly~~d~~~~~~~I~~~~~dg~~~~-~---~~~~~l~~P~giaid~~~--~~lY~~d~~~~ 286 (357)
++|. ...++.+... +.|...++...... . .+...-....++++.+.. +.++++-...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVTGGAD---NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp ECCCC----------CTTCEEEEEETT---SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EcCccccccccccCCCCCCEEEEEeCC---CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 9984 3445444443 46666666543221 1 122233456789998653 56666655667
Q ss_pred eEEEEeCCCCC---eEEEecC--CCCceEEEEEE-CC-EEEEEeCCCCeEEEEeCccCc
Q psy13635 287 KIEMIDFDGNN---RRELINE--NLPHVFGISLL-GD-YVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 287 ~I~~~~~dG~~---~~~i~~~--~~~~p~gia~~-~~-~ly~td~~~~~I~~~~~~~g~ 338 (357)
.|...+.+... ...+... .......+++. .+ .|+.+. ..+.|+..+...+.
T Consensus 232 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 232 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG-GDNKVTLWKENLEG 289 (379)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE-SSSSEEEEEEEETT
T ss_pred EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec-CCCcEEEEeCCCCC
Confidence 88888876542 2233321 22345667775 34 444444 45777666654333
No 221
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.07 E-value=0.0059 Score=55.20 Aligned_cols=253 Identities=9% Similarity=0.026 Sum_probs=149.7
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
.......++++++.+. +..+-..++.|+..+..... ....+...-.....+++.+.++ +..+-...+.|...++.
T Consensus 53 gH~~~v~~~~~s~d~~-~l~s~s~Dg~v~iWd~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 53 GHLAKIYAMHWGTDSR-LLLSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCAYAPSGN-YVACGGLDNICSIYNLK 127 (340)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTTEEEEEETTTCC---EEEEEECSSSCEEEEEECTTSS-EEEEEETTCEEEEEETT
T ss_pred CCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCC---cceEeecCCccEEEEEECCCCC-EEEEEeCCCeEEEEECc
Confidence 3455788999987554 44555667888888877653 2333343445577889997554 44555567888888876
Q ss_pred CCce--EEE-EecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEE
Q psy13635 148 GKKR--KVL-YWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAI 224 (357)
Q Consensus 148 g~~~--~~~-~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~gi 224 (357)
.... ... ...+ .......+++.+ .+.+ ++....+.|...++..................+
T Consensus 128 ~~~~~~~~~~~~~~---------------h~~~v~~~~~~~-~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~ 190 (340)
T 1got_B 128 TREGNVRVSRELAG---------------HTGYLSCCRFLD-DNQI-VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSL 190 (340)
T ss_dssp TCSBSCEEEEEEEC---------------CSSCEEEEEEEE-TTEE-EEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred cCCCcceeEEEecC---------------CCccEEEEEECC-CCcE-EEEECCCcEEEEECCCCcEEEEEcCCCCceEEE
Confidence 4321 111 0001 001234455543 3444 455556788888877554444443344567899
Q ss_pred EEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec-
Q psy13635 225 TLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN- 303 (357)
Q Consensus 225 avd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~- 303 (357)
+++|... ++.+-... +.|...++........+...-....++++.+.+ ..+.+-...+.|...++..........
T Consensus 191 ~~~~~~~-~l~sg~~d--~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 266 (340)
T 1got_B 191 SLAPDTR-LFVSGACD--ASAKLWDVREGMCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQELMTYSH 266 (340)
T ss_dssp EECTTSS-EEEEEETT--SCEEEEETTTCSEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EECCCCC-EEEEEeCC--CcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCcEEEEEcc
Confidence 9998644 44444332 578878876555444444444567899998654 445555567789999886544322222
Q ss_pred CC-CCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecc
Q psy13635 304 EN-LPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIER 346 (357)
Q Consensus 304 ~~-~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~ 346 (357)
.. ......+++. .+.+..+-...+.|...+..+++....+...
T Consensus 267 ~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h 311 (340)
T 1got_B 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311 (340)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecC
Confidence 11 2235667776 3556666666678888887666666555443
No 222
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.07 E-value=0.0057 Score=54.79 Aligned_cols=258 Identities=9% Similarity=0.007 Sum_probs=150.3
Q ss_pred CCcEEEEEcCCCC-c----ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEE
Q psy13635 49 SKDIRIANLSRPL-K----PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLA 123 (357)
Q Consensus 49 ~~~i~~~~~~~~~-~----~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~gla 123 (357)
...|+..++.+.. . .............+++.+.+..| .+-..++.|+..++.... ....+...-.....++
T Consensus 39 D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l-~s~s~D~~v~~wd~~~~~---~~~~~~~h~~~v~~~~ 114 (319)
T 3frx_A 39 DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYA-LSASWDKTLRLWDVATGE---TYQRFVGHKSDVMSVD 114 (319)
T ss_dssp TSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEE
T ss_pred CccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEE-EEEeCCCEEEEEECCCCC---eeEEEccCCCcEEEEE
Confidence 4557766664311 1 11222344567788998865554 455566888888887653 2333444445678899
Q ss_pred EEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC-----CCeEEEEeCCCC
Q psy13635 124 IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV-----ARNLYWTDTGTD 198 (357)
Q Consensus 124 vd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~-----~~~lY~td~~~~ 198 (357)
+++ .+.+.++-...+.|...++.+.....+.... .....+++.+. .+.++++....+
T Consensus 115 ~~~-~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~~~~~~~l~s~~~d~ 176 (319)
T 3frx_A 115 IDK-KASMIISGSRDKTIKVWTIKGQCLATLLGHN-----------------DWVSQVRVVPNEKADDDSVTIISAGNDK 176 (319)
T ss_dssp ECT-TSCEEEEEETTSCEEEEETTSCEEEEECCCS-----------------SCEEEEEECCC------CCEEEEEETTS
T ss_pred EcC-CCCEEEEEeCCCeEEEEECCCCeEEEEeccC-----------------CcEEEEEEccCCCCCCCccEEEEEeCCC
Confidence 986 4555666667889999998876544432110 12233444332 234555666667
Q ss_pred eEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEE
Q psy13635 199 RIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKL 278 (357)
Q Consensus 199 ~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~l 278 (357)
.|...++..................++++|.+..|..+... +.|...++........+.. -.....+++.+.+..|
T Consensus 177 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~d---g~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l 252 (319)
T 3frx_A 177 MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKD---GEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWL 252 (319)
T ss_dssp CEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETT---CEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEE
T ss_pred EEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEE
Confidence 88888887654444343444567899999875555555443 5888888876654444432 2456889998776666
Q ss_pred EEEeCCCCeEEEEeCCCCCeEEEecCC--------CCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 279 YWCDAKTDKIEMIDFDGNNRRELINEN--------LPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 279 Y~~d~~~~~I~~~~~dG~~~~~i~~~~--------~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
..+.. ..+...+.+........... -.....+++. +|...++-...+.|+..+.
T Consensus 253 a~~~~--~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 253 AAATA--TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp EEEET--TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EEEcC--CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence 66553 34666666554332222111 1234567775 3444555555667665554
No 223
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.06 E-value=0.004 Score=63.30 Aligned_cols=264 Identities=9% Similarity=-0.022 Sum_probs=154.3
Q ss_pred CeEEEEEeCCcEEEEEcCCCCcceEec--------c--CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 41 AQMLLFATSKDIRIANLSRPLKPVTII--------K--DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 41 ~~~l~~~~~~~i~~~~~~~~~~~~~~~--------~--~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
...++-+....|.+++.... .+.... . ......++..|. ++.||+... .+.|.+++..+.. ..
T Consensus 324 g~lWigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~-~~Gl~~~~~~~~~----~~ 396 (781)
T 3v9f_A 324 NNIWIGTWGGGINFISNAPP-TFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGKLWIGTD-GGGINVFENGKRV----AI 396 (781)
T ss_dssp CCEEEEEBSSCEEEECSSCC-SCEEEC----CCCSSCCSSSCEEEEEECT-TSCEEEEEB-SSCEEEEETTEEE----EE
T ss_pred CCEEEEecCCeEEEeCCCCC-cceeeccCccccccCCCCCcceEEEEEcC-CCCEEEEeC-CCcEEEEECCCCe----EE
Confidence 33333333667877776542 333221 1 123467787775 577777643 3458887765432 11
Q ss_pred EEe--CC--cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 111 VIT--NG--LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 111 ~~~--~~--~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
... .+ .....+++.|. .+.||+... .+.+.+++......+.+....+ .......++.| .
T Consensus 397 ~~~~~~~~~~~~v~~i~~d~-~g~lWigt~-~~Gl~~~~~~~~~~~~~~~~~~--------------~~~~v~~i~~d-~ 459 (781)
T 3v9f_A 397 YNKENRELLSNSVLCSLKDS-EGNLWFGTY-LGNISYYNTRLKKFQIIELEKN--------------ELLDVRVFYED-K 459 (781)
T ss_dssp CC-----CCCSBEEEEEECT-TSCEEEEET-TEEEEEECSSSCEEEECCSTTT--------------CCCCEEEEEEC-T
T ss_pred EccCCCCCCCcceEEEEECC-CCCEEEEec-cCCEEEEcCCCCcEEEeccCCC--------------CCCeEEEEEEC-C
Confidence 111 11 13466788884 677877653 3568888775443332211000 11245678888 5
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCceEEEecCC-----CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee-
Q psy13635 187 ARNLYWTDTGTDRIEVCRLEGTHRKVLVNTD-----LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK- 260 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~-----~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~- 260 (357)
.++||++.. +.+.++++.+.......... ...+.+|+.|+ .|.|+++..+ ..+.+.+.++...+.+..
T Consensus 460 ~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~ 533 (781)
T 3v9f_A 460 NKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFG---GGVGIYTPDMQLVRKFNQY 533 (781)
T ss_dssp TSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT-TCCEEEEESS---SCEEEECTTCCEEEEECTT
T ss_pred CCCEEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcC-CCCEEEEEcC---CCEEEEeCCCCeEEEccCC
Confidence 678888766 56899988765443333211 24678899996 5899988764 368888887665544432
Q ss_pred CCC--CCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec-CCC--CceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 261 DRL--GWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN-ENL--PHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 261 ~~l--~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~-~~~--~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
.++ ....+|..| .+++||++.. .+-+.+++......+.+-. .++ ....++..+ +|.||++. .+.|.++++
T Consensus 534 ~~l~~~~i~~i~~d-~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~ 609 (781)
T 3v9f_A 534 EGFCSNTINQIYRS-SKGQMWLATG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--NTGISCYIT 609 (781)
T ss_dssp TTCSCSCEEEEEEC-TTSCEEEEET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--SSCEEEEET
T ss_pred CCCCCCeeEEEEEC-CCCCEEEEEC-CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc--CCceEEEEC
Confidence 222 235688888 6788988875 4443888876554433322 122 235678887 57888874 345888887
Q ss_pred ccCc
Q psy13635 335 ITGN 338 (357)
Q Consensus 335 ~~g~ 338 (357)
.+++
T Consensus 610 ~~~~ 613 (781)
T 3v9f_A 610 SKKC 613 (781)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 4443
No 224
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.06 E-value=0.00013 Score=73.46 Aligned_cols=285 Identities=11% Similarity=0.038 Sum_probs=155.9
Q ss_pred eEEEEEeCCcEEEEEcCCCCcceEeccCCC----cEEEEEEEccCCEEEEEeCC--------CCeEEEEEcCCCCcceeE
Q psy13635 42 QMLLFATSKDIRIANLSRPLKPVTIIKDLE----EGAAIDYYYKKSMVCWTDHG--------TEMISCCTFDGNNVGSKH 109 (357)
Q Consensus 42 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~i~~d~~~~~ly~~d~~--------~~~I~~~~~~g~~~~~~~ 109 (357)
.+++.+....|+..|+.++.. ..+..... ....+++++++..|.++... .+.|+..++++......
T Consensus 28 ~~~~~~~d~~i~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~- 105 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETGQS-YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG- 105 (719)
T ss_dssp EEEEECTTSCEEEEESSSCCE-EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-
T ss_pred eEEEEcCCCCEEEEEcCCCcE-EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc-
Confidence 344434456799999987543 33332211 26688899988888776541 36799999887741000
Q ss_pred EEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeee-e--ccC-cccccCCceEEEeC
Q psy13635 110 NVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIAS-Y--KLP-TIEVEHPDGVAVDW 185 (357)
Q Consensus 110 ~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~-~--~~~-~~~~~~p~glavD~ 185 (357)
..+. .....+++.|.++.|.++. .+.|+..++++.....+...+.. ..+.- . .+. .+-+....++++.|
T Consensus 106 ~~l~---~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~l~~~~~~--~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 106 NELP---RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQITFNGRE--NKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp SCCC---SSBCCEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCCCCBT--TTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred eecC---cccccceECCCCCEEEEEE--CCeEEEEeCCCCCcEEEecCCCc--CCeEcccccceeeeecccCcccEEECC
Confidence 1121 3467789999888888875 46899988876655443221110 00000 0 000 00012235788887
Q ss_pred CCCeEEEEeCCC---------------------------------CeEEEEEcCCCceE---EEec-----CCCCCceEE
Q psy13635 186 VARNLYWTDTGT---------------------------------DRIEVCRLEGTHRK---VLVN-----TDLVEPRAI 224 (357)
Q Consensus 186 ~~~~lY~td~~~---------------------------------~~I~~~~~~g~~~~---~~~~-----~~~~~P~gi 224 (357)
.+..|+++.... ..|...+.++.... .+.. ........+
T Consensus 179 DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (719)
T 1z68_A 179 NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWL 258 (719)
T ss_dssp TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEE
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEe
Confidence 777787653211 15667777665431 1110 112234688
Q ss_pred EEeCCCCEEEEE--eCCCCCCeEEEEe----cCCCceEEEee----CCCCCc-----eEEEEecCCCEEEE-Ee--CCCC
Q psy13635 225 TLSPAHGYLFWS--DWNEKRPKIERSL----LNGGERVLLVK----DRLGWP-----NGITLDVDNEKLYW-CD--AKTD 286 (357)
Q Consensus 225 avd~~~g~Ly~~--d~~~~~~~I~~~~----~dg~~~~~~~~----~~l~~P-----~giaid~~~~~lY~-~d--~~~~ 286 (357)
+++|. +++.++ +.......|+..+ .++.....+.. ..-.+. ..+++.+++..|++ +. .+..
T Consensus 259 ~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~ 337 (719)
T 1z68_A 259 TWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYK 337 (719)
T ss_dssp EESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCE
T ss_pred EEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCce
Confidence 89987 776665 3222124688888 65543333331 111111 25677766676766 33 2345
Q ss_pred eEEEEeCCCCCeEEEecCCCCceEEEEE-ECCEEEEEeCC------CCeEEEEeCccC
Q psy13635 287 KIEMIDFDGNNRRELINENLPHVFGISL-LGDYVYWTDWQ------RRSIDRVNKITG 337 (357)
Q Consensus 287 ~I~~~~~dG~~~~~i~~~~~~~p~gia~-~~~~ly~td~~------~~~I~~~~~~~g 337 (357)
.|+.++.++...+.+.. .-....++.. +++.||++... ...+++++..+|
T Consensus 338 ~l~~~~~~~~~~~~lt~-~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 338 HIHYIKDTVENAIQITS-GKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EEEEESSCSTTCEECSC-SSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EEEEEECCCCceEeccc-CceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 78888988766544432 2112223222 56888888754 345788876444
No 225
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.05 E-value=0.0088 Score=56.22 Aligned_cols=280 Identities=12% Similarity=0.002 Sum_probs=158.7
Q ss_pred EEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCcee
Q psy13635 43 MLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDG 121 (357)
Q Consensus 43 ~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~g 121 (357)
+++.+. ...|+..|+............-....++++.+.+ ++++-..++.|...+++... ....+.........
T Consensus 134 ~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~---~~~~~~~h~~~v~~ 208 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGC---CTHVFEGHNSTVRC 208 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCc---EEEEECCCCCccEE
Confidence 344433 5679999987644444444466678899997644 55666667889988887653 23344434456677
Q ss_pred EEEEc-CCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCC----------CcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 122 LAIDW-LTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDID----------QPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 122 lavd~-~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~----------~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
+++.+ .++...++-...+.|...++.............. .+..+.. ... ....-.++.+.++.+
T Consensus 209 l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~v~~~~~~~~~l 283 (464)
T 3v7d_B 209 LDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV---LRG--HMASVRTVSGHGNIV 283 (464)
T ss_dssp EEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE---ECC--CSSCEEEEEEETTEE
T ss_pred EEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE---ccC--ccceEEEEcCCCCEE
Confidence 88875 3456666777788898888765432211100000 0000000 000 111112334334444
Q ss_pred EEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEE
Q psy13635 191 YWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGIT 270 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gia 270 (357)
+ +....+.|...++..................++++|.+..|+.+... +.|...++........+...-.....++
T Consensus 284 ~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~h~~~v~~~~ 359 (464)
T 3v7d_B 284 V-SGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD---TTIRIWDLENGELMYTLQGHTALVGLLR 359 (464)
T ss_dssp E-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred E-EEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECCCCcEEEEEeCCCCcEEEEE
Confidence 4 44445788888887554444444444667899999976677666554 5788888865554444444444567777
Q ss_pred EecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEE--ECCEEEEEeCCCCeEEEEeCccCceeEE
Q psy13635 271 LDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISL--LGDYVYWTDWQRRSIDRVNKITGNDREV 342 (357)
Q Consensus 271 id~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~--~~~~ly~td~~~~~I~~~~~~~g~~~~~ 342 (357)
++ +..| ++-...+.|...+........... .......+++ ++..+.... .+.|...+..+|+....
T Consensus 360 ~~--~~~l-~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 360 LS--DKFL-VSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS--ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EC--SSEE-EEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE--TTEEEEEETTTCCEEES
T ss_pred Ec--CCEE-EEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec--CCeEEEEECCCCcEEeh
Confidence 74 4444 444556789999887644433222 1212222333 344444443 57888888777776654
No 226
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.99 E-value=0.011 Score=55.31 Aligned_cols=264 Identities=12% Similarity=0.058 Sum_probs=145.5
Q ss_pred eEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCce
Q psy13635 42 QMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPD 120 (357)
Q Consensus 42 ~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~ 120 (357)
.+++.+. .+.|+..|+.................+++++ +.+.++...++.|...++.... ....+........
T Consensus 144 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~ 217 (435)
T 1p22_A 144 QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDVNTGE---MLNTLIHHCEAVL 217 (435)
T ss_dssp SEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECC---SSEEEEEETTSCEEEEESSSCC---EEEEECCCCSCEE
T ss_pred CEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEEC---CCEEEEEcCCCeEEEEECCCCc---EEEEEcCCCCcEE
Confidence 3444444 5679999987644444444455567777773 4455566667889988887664 2333333334455
Q ss_pred eEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeE
Q psy13635 121 GLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRI 200 (357)
Q Consensus 121 glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I 200 (357)
.++++ .+ .+++-...+.|...++............ ...-.....+++| ++.|+ +....+.|
T Consensus 218 ~l~~~--~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~-------------~~~~~~v~~~~~~--~~~l~-s~~~dg~i 278 (435)
T 1p22_A 218 HLRFN--NG-MMVTCSKDRSIAVWDMASPTDITLRRVL-------------VGHRAAVNVVDFD--DKYIV-SASGDRTI 278 (435)
T ss_dssp EEECC--TT-EEEEEETTSCEEEEECSSSSCCEEEEEE-------------CCCSSCEEEEEEE--TTEEE-EEETTSEE
T ss_pred EEEEc--CC-EEEEeeCCCcEEEEeCCCCCCceeeeEe-------------cCCCCcEEEEEeC--CCEEE-EEeCCCeE
Confidence 55554 44 5555556788998888654332111000 0011133455553 44444 44556788
Q ss_pred EEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEE
Q psy13635 201 EVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYW 280 (357)
Q Consensus 201 ~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~ 280 (357)
...++..................++++ ...++.+... +.|...++........+........++++| +..| +
T Consensus 279 ~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l-~ 350 (435)
T 1p22_A 279 KVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSD---NTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRI-V 350 (435)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETT---SCEEEEETTTCCEEEEECCCSSCEEEEECC--SSEE-E
T ss_pred EEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCC---CeEEEEECCCCCEEEEEeCCcCcEEEEEec--CCEE-E
Confidence 888887544433333344556677776 3555555544 578888887554444443344445677763 4444 4
Q ss_pred EeCCCCeEEEEeCCCCC---------eEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCce
Q psy13635 281 CDAKTDKIEMIDFDGNN---------RRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 281 ~d~~~~~I~~~~~dG~~---------~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~ 339 (357)
+-...+.|...+..... .............++++++ ..+++-...+.|...+..++..
T Consensus 351 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 351 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp EEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECS-SCEEECCSSSEEEEEC------
T ss_pred EEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCC-CEEEEEeCCCEEEEEECCCCCC
Confidence 44456788888864321 2223333344556777744 4455556678888777644443
No 227
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.98 E-value=0.012 Score=59.31 Aligned_cols=240 Identities=12% Similarity=0.124 Sum_probs=140.5
Q ss_pred ccCCEEEEEeCCC----CeEEEEEcC---CCCcceeEEEEeCC-c-----CCceeEEEEcCCCeEEEEeCC--C--CEEE
Q psy13635 80 YKKSMVCWTDHGT----EMISCCTFD---GNNVGSKHNVITNG-L-----ITPDGLAIDWLTEKLYWTDSE--T--NKLE 142 (357)
Q Consensus 80 ~~~~~ly~~d~~~----~~I~~~~~~---g~~~~~~~~~~~~~-~-----~~p~glavd~~~~~ly~td~~--~--~~I~ 142 (357)
+.++++|++-... ..|++.+.+ +.. .+.++..+ + ....++++.|.++.|.++... . ..|+
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTK---GRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCC---CEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCC---CEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEE
Confidence 6688888774432 468898876 443 23332111 1 134578888888888665432 2 3699
Q ss_pred EEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-------------CCeEEEEEcCCCc
Q psy13635 143 VSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-------------TDRIEVCRLEGTH 209 (357)
Q Consensus 143 ~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-------------~~~I~~~~~~g~~ 209 (357)
+.++++.......... . ...+++..+. +.||++... ..+|++.++.+..
T Consensus 193 v~dl~tg~~~~~~~~~----------------~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~ 254 (741)
T 1yr2_A 193 FVGVADGKPLADELKW----------------V-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQ 254 (741)
T ss_dssp EEETTTCCEEEEEEEE----------------E-ESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCG
T ss_pred EEECCCCCCCCccCCC----------------c-eeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCc
Confidence 9998876543221110 0 1135566666 777776532 2358888876543
Q ss_pred e-EEEecCCCC---CceEEEEeCCCCEEEEEeCCC--CCCeEEEEecCCC--c-eEEEeeCCCCCceEEEEecCCCEEEE
Q psy13635 210 R-KVLVNTDLV---EPRAITLSPAHGYLFWSDWNE--KRPKIERSLLNGG--E-RVLLVKDRLGWPNGITLDVDNEKLYW 280 (357)
Q Consensus 210 ~-~~~~~~~~~---~P~giavd~~~g~Ly~~d~~~--~~~~I~~~~~dg~--~-~~~~~~~~l~~P~giaid~~~~~lY~ 280 (357)
. ..++...-. .-.+++++|.+..|+++.... ....|+..++++. . .+.+... ...-... +++.++.||+
T Consensus 255 ~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~-~~~dg~~l~~ 332 (741)
T 1yr2_A 255 SADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD-LKAQWDF-VDGVGDQLWF 332 (741)
T ss_dssp GGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS-SSSCEEE-EEEETTEEEE
T ss_pred hhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC-CCceEEE-EeccCCEEEE
Confidence 2 222222222 246888998866787776432 1358999998876 4 4444432 2222222 3457888887
Q ss_pred EeC---CCCeEEEEeCCCC--CeEEEecCCCCceEEEEEECCEEEEEeCCCC--eEEEEeCccCceeEEE
Q psy13635 281 CDA---KTDKIEMIDFDGN--NRRELINENLPHVFGISLLGDYVYWTDWQRR--SIDRVNKITGNDREVI 343 (357)
Q Consensus 281 ~d~---~~~~I~~~~~dG~--~~~~i~~~~~~~p~gia~~~~~ly~td~~~~--~I~~~~~~~g~~~~~i 343 (357)
... .+.+|+.++.++. ..+.++...-....+++++++.++++....+ +|+.++. +|+....+
T Consensus 333 ~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~-~g~~~~~l 401 (741)
T 1yr2_A 333 VSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDL-DGKPAGAV 401 (741)
T ss_dssp EECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEET-TSCEEEEC
T ss_pred EECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC-CCCceeec
Confidence 754 2567999998873 4455654433344577888888888765443 4677776 45544443
No 228
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.97 E-value=0.00082 Score=63.21 Aligned_cols=204 Identities=10% Similarity=0.057 Sum_probs=127.2
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe-CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~ 149 (357)
....+|+|+|.++.+..+...++.|...+++.... ...... ..-....+|++.|.+++++++-+..+.|...++.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~--~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK--PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC--CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc--eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 35789999997777777777778888888876541 122211 223457889998777777788888899999999887
Q ss_pred ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCC
Q psy13635 150 KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPA 229 (357)
Q Consensus 150 ~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~ 229 (357)
....+..... .......+++++.+ .++++....+.|...+++++....+. .......+++++|.
T Consensus 198 ~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 198 ILRVFASSDT--------------INIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKELWNLR-MHKKKVTHVALNPC 261 (435)
T ss_dssp EEEEEECCSS--------------CSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCBCCCSB-CCSSCEEEEEECTT
T ss_pred ceeEEeccCC--------------CCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcceeEEEe-cccceEEeeeecCC
Confidence 6655543221 11234568888654 55556666788999999886544332 23345788999987
Q ss_pred CCEEEEEeCCCCCCeEEEEecCCCce-EEEee--CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 230 HGYLFWSDWNEKRPKIERSLLNGGER-VLLVK--DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 230 ~g~Ly~~d~~~~~~~I~~~~~dg~~~-~~~~~--~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
...++.+-... +.|...++..... ..+.. ..-....++++++.+..|..+ ...+.|...+...
T Consensus 262 ~~~~~~s~s~d--~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~-~~D~~i~iwd~~~ 327 (435)
T 4e54_B 262 CDWFLATASVD--QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT-DQKSEIRVYSASQ 327 (435)
T ss_dssp CSSEEEEEETT--SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE-ESSSCEEEEESSS
T ss_pred CceEEEEecCc--ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE-cCCCEEEEEECCC
Confidence 66566554442 3555555543211 11111 112234677887655555444 4567788877643
No 229
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.96 E-value=0.023 Score=57.87 Aligned_cols=267 Identities=8% Similarity=-0.006 Sum_probs=154.3
Q ss_pred EEEEeC-CcEEEEEcCCCCcceEec--cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC-----
Q psy13635 44 LLFATS-KDIRIANLSRPLKPVTII--KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG----- 115 (357)
Q Consensus 44 l~~~~~-~~i~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~----- 115 (357)
+.++.. ..|.+++..+. ...... .......++..|. ++.||++.. .+.|++++..+.. .......
T Consensus 186 lwigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~-~g~lwigt~-~~Gl~~~~~~~~~----~~~~~~~~~~~~ 258 (795)
T 4a2l_A 186 IYIGTSTDGLYTYSITQK-TFEKVIPILGTKQIQAILQQS-PTRIWVATE-GAGLFLINPKTKE----IKNYLHSPSNPK 258 (795)
T ss_dssp EEEEESSSCEEEEETTTC-CEEECC----CCCEEEEEEEE-TTEEEEEEB-SSCEEEEETTTTE----EEEECCCTTCTT
T ss_pred EEEEECCCCEEEEeCCCC-eEEEecCCCCCCeeEEEEEcC-CCCEEEEEC-CCCeEEEeCCCCe----EEEeecCCCCcc
Confidence 444443 57888887552 232221 1233466777775 677777643 3358888877652 2222211
Q ss_pred ---cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE
Q psy13635 116 ---LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW 192 (357)
Q Consensus 116 ---~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~ 192 (357)
-.....++.| ..+.|++.... -|.+++........+.... ..+..+ .-.....|..| ..|.|++
T Consensus 259 ~l~~~~i~~i~~d-~~g~lWigt~~--Gl~~~~~~~~~~~~~~~~~-~~~~~l--------~~~~i~~i~~D-~~g~lWi 325 (795)
T 4a2l_A 259 SISSNYIRSLAMD-SQNRLWIGTFN--DLNIYHEGTDSFASYSSNP-VENGSL--------SQRSVRSIFMD-SQGGMWL 325 (795)
T ss_dssp SCSCSBEEEEEEC-TTSCEEEEESS--CEEEEETTTTEEEEECCCT-TSTTSC--------SSSCEEEEEEC-TTSCEEE
T ss_pred ccCCCeEEEEEEc-CCCCEEEEeCC--hhheEcCCCCeEEEEecCC-CCCCCC--------CCCcEEEEEEe-CCcCEEE
Confidence 1336678888 47778876643 5788887655443332111 111111 11346778889 5678887
Q ss_pred EeCCCCeEEEEEcCCCceEEEecC----C--CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-----
Q psy13635 193 TDTGTDRIEVCRLEGTHRKVLVNT----D--LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD----- 261 (357)
Q Consensus 193 td~~~~~I~~~~~~g~~~~~~~~~----~--~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~----- 261 (357)
.... +-|.++++........... . -....+++.|+ +|.|++.... +.|.+.+............
T Consensus 326 gt~~-~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~lWiGt~~---~Gl~~~~~~~~~~~~~~~~~~~~~ 400 (795)
T 4a2l_A 326 GTYF-GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DKNLWIGTND---GGLNLYNPITQRFTSYTLQEDESA 400 (795)
T ss_dssp EESS-SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TSCEEEEESS---SCEEEECTTTCCEEEECCC-----
T ss_pred EECC-CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CCCEEEEECC---CCeEEEcCCCCcEEEEecCCCCcc
Confidence 6653 4577777665433333221 1 23467888886 5889888765 4788888775544443211
Q ss_pred -C--CCCceEEEEecCCCE-EEEEeCCCCeEEEEeCCCCCeEEEecC----CCCceEEEEEE-CCEEEEEeCCCCeEEEE
Q psy13635 262 -R--LGWPNGITLDVDNEK-LYWCDAKTDKIEMIDFDGNNRRELINE----NLPHVFGISLL-GDYVYWTDWQRRSIDRV 332 (357)
Q Consensus 262 -~--l~~P~giaid~~~~~-lY~~d~~~~~I~~~~~dG~~~~~i~~~----~~~~p~gia~~-~~~ly~td~~~~~I~~~ 332 (357)
. .....+++.| .+++ ||+.-. .+.+.+++.++...+.+... .......|..+ +|.||+... +.|+++
T Consensus 401 ~~l~~~~v~~i~~d-~~g~~lWigt~-~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~ 476 (795)
T 4a2l_A 401 RGIGSNNIKAVYVD-EKKSLVYIGTH-AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRF 476 (795)
T ss_dssp -CCSCSCEEEEEEE-TTTTEEEEEET-TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEE
T ss_pred cCCCCccEEEEEEc-CCCCEEEEEeC-cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEE
Confidence 1 1345688888 5677 776653 45689998876555444321 12345677777 578888765 468888
Q ss_pred eCccCce
Q psy13635 333 NKITGND 339 (357)
Q Consensus 333 ~~~~g~~ 339 (357)
++.+++.
T Consensus 477 ~~~~~~~ 483 (795)
T 4a2l_A 477 NPEQRSF 483 (795)
T ss_dssp ETTTTEE
T ss_pred eCCCCeE
Confidence 8755543
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.92 E-value=0.0051 Score=61.74 Aligned_cols=243 Identities=14% Similarity=0.145 Sum_probs=141.2
Q ss_pred eecCCCCeEEEEEeC------CcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCC------------CCeEE
Q psy13635 35 LSHHVAAQMLLFATS------KDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHG------------TEMIS 96 (357)
Q Consensus 35 ~~~~~~~~~l~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~------------~~~I~ 96 (357)
...++....|.|+.+ ..|+..|+.++.......... +..++++. ++..||++... ...|+
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~ 211 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV-KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVY 211 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTTEEEEEESSCCC-------CCCCEEE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc-eeccEEEe-CCCEEEEEEecCcccccccccCCCcEEE
Confidence 345556666776552 358899998754333322211 11356777 78888887543 24688
Q ss_pred EEEcCCCCcceeEEEEeCCcC----CceeEEEEcCCCeEEEEeC---CCCEEEEEEcCCC--ceEEEEecCCCCcceeee
Q psy13635 97 CCTFDGNNVGSKHNVITNGLI----TPDGLAIDWLTEKLYWTDS---ETNKLEVSSLDGK--KRKVLYWEDIDQPRAIAS 167 (357)
Q Consensus 97 ~~~~~g~~~~~~~~~~~~~~~----~p~glavd~~~~~ly~td~---~~~~I~~~~~~g~--~~~~~~~~~~~~p~~i~~ 167 (357)
+..+.... .....+...-. .-.++++.+.++.|+++.. ..+.|+..++++. ..+.+....
T Consensus 212 ~~~lgt~~--~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~--------- 280 (693)
T 3iuj_A 212 FHRLGTAQ--EDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL--------- 280 (693)
T ss_dssp EEETTSCG--GGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS---------
T ss_pred EEECCCCc--ccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC---------
Confidence 88876543 11233332222 2346788888888877653 2358888888654 233332111
Q ss_pred eccCcccccCCceEEEeCCCCeEEEEeCC---CCeEEEEEcCCCce---EEEecCCCCCceEEEEeCCCCEEEEEeCCCC
Q psy13635 168 YKLPTIEVEHPDGVAVDWVARNLYWTDTG---TDRIEVCRLEGTHR---KVLVNTDLVEPRAITLSPAHGYLFWSDWNEK 241 (357)
Q Consensus 168 ~~~~~~~~~~p~glavD~~~~~lY~td~~---~~~I~~~~~~g~~~---~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~ 241 (357)
..-.. .+++.++.||+.... ..+|.++++++... +.++...-... .+++.++.|+++.....
T Consensus 281 --------~~~~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~~~g 348 (693)
T 3iuj_A 281 --------DADVS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYMVDA 348 (693)
T ss_dssp --------SSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEEETT
T ss_pred --------CceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE---EEEEECCEEEEEEEECC
Confidence 01111 145567888876543 35899999987543 55555432232 55555678887765432
Q ss_pred CCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC---CCCeEEEEeCCCCCeEEEe
Q psy13635 242 RPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA---KTDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 242 ~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~---~~~~I~~~~~dG~~~~~i~ 302 (357)
..+|...+++|.....+.........++..++.++.|+++-. ....++.+++++...+.+.
T Consensus 349 ~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 349 TARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp EEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred eeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 348999999987666553222223345555556677776543 2368999998766555443
No 231
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.92 E-value=0.015 Score=54.49 Aligned_cols=264 Identities=8% Similarity=0.031 Sum_probs=155.0
Q ss_pred EEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCcee
Q psy13635 43 MLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDG 121 (357)
Q Consensus 43 ~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~g 121 (357)
+++.+. ...|+..|+.................+++++ ++ +.++...++.|...++.... ....+...-.....
T Consensus 131 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~ 204 (445)
T 2ovr_B 131 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DN-IIISGSTDRTLKVWNAETGE---CIHTLYGHTSTVRC 204 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEE
T ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CC-EEEEEeCCCeEEEEECCcCc---EEEEECCCCCcEEE
Confidence 344443 5679999987644444444455667888887 34 55555667788888887653 23333333345666
Q ss_pred EEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEE
Q psy13635 122 LAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIE 201 (357)
Q Consensus 122 lavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~ 201 (357)
++++ ++. +++-..++.|...++............ ......+++| + ..+++....+.|.
T Consensus 205 ~~~~--~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~----------------~~~v~~~~~~--~-~~l~~~~~dg~i~ 262 (445)
T 2ovr_B 205 MHLH--EKR-VVSGSRDATLRVWDIETGQCLHVLMGH----------------VAAVRCVQYD--G-RRVVSGAYDFMVK 262 (445)
T ss_dssp EEEE--TTE-EEEEETTSEEEEEESSSCCEEEEEECC----------------SSCEEEEEEC--S-SCEEEEETTSCEE
T ss_pred EEec--CCE-EEEEeCCCEEEEEECCCCcEEEEEcCC----------------cccEEEEEEC--C-CEEEEEcCCCEEE
Confidence 7776 444 455556789999998754433222211 1134455553 3 4444555567888
Q ss_pred EEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEE
Q psy13635 202 VCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWC 281 (357)
Q Consensus 202 ~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~ 281 (357)
..++..................++++ ...++.+... +.|...++........+........+++.+ ++.| ++
T Consensus 263 iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~ 334 (445)
T 2ovr_B 263 VWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD---TSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNIL-VS 334 (445)
T ss_dssp EEEGGGTEEEEEECCCSSCEEEEEEC--SSEEEEEETT---SCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEE-EE
T ss_pred EEECCCCcEeEEecCCCCceEEEEEC--CCEEEEEeCC---CeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEE-EE
Confidence 88877544433333333456677774 4566666554 578888876555444443333445666664 4444 44
Q ss_pred eCCCCeEEEEeCCCCCeEEEecC---CCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 282 DAKTDKIEMIDFDGNNRRELINE---NLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 282 d~~~~~I~~~~~dG~~~~~i~~~---~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
-...+.|...+.........+.. .......++++++.++.+ ...+.|...+..+|+....+
T Consensus 335 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 335 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS-SDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEE-ETTSEEEEEETTTCCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEE-eCCCeEEEEECCCCceeeee
Confidence 44567899999854433333322 223456677765555544 45688888888788877666
No 232
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.92 E-value=0.012 Score=55.08 Aligned_cols=196 Identities=14% Similarity=0.106 Sum_probs=118.5
Q ss_pred EeecCCCCe-EEEEEe-CCcEEEEEcCCCCcceEec--cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeE
Q psy13635 34 ALSHHVAAQ-MLLFAT-SKDIRIANLSRPLKPVTII--KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKH 109 (357)
Q Consensus 34 ~~~~~~~~~-~l~~~~-~~~i~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 109 (357)
|++-++..+ .|.... ...|+..|+.......... ..-....+|+|+|.++.++.+-..++.|...++.+.. ..
T Consensus 124 ~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~---~~ 200 (435)
T 4e54_B 124 SLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI---LR 200 (435)
T ss_dssp EEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE---EE
T ss_pred EEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc---ee
Confidence 333344334 333333 5578889987643333322 2445678999998777677777778889988988763 12
Q ss_pred EEEeCC--cCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC
Q psy13635 110 NVITNG--LITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA 187 (357)
Q Consensus 110 ~~~~~~--~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~ 187 (357)
.+.... ......+++++ ++.++++-...+.|...++++.....+. .--....++++.+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~~~~~~-----------------~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKELWNLR-----------------MHKKKVTHVALNPCC 262 (435)
T ss_dssp EEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSCBCCCSB-----------------CCSSCEEEEEECTTC
T ss_pred EEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcceeEEEe-----------------cccceEEeeeecCCC
Confidence 222221 12346788987 4556666667889999998876432221 011245678888888
Q ss_pred CeEEEEeCCCCeEEEEEcCCCc-eEEEec--CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 188 RNLYWTDTGTDRIEVCRLEGTH-RKVLVN--TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g~~-~~~~~~--~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
+.++++....+.|...++.... ...+.. ........++++|.+..|..+... +.|...+....
T Consensus 263 ~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D---~~i~iwd~~~~ 328 (435)
T 4e54_B 263 DWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQK---SEIRVYSASQW 328 (435)
T ss_dssp SSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS---SCEEEEESSSS
T ss_pred ceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCC---CEEEEEECCCC
Confidence 7788777767778777765322 111111 122345788899876666655544 46776666543
No 233
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.90 E-value=0.025 Score=56.46 Aligned_cols=252 Identities=10% Similarity=0.046 Sum_probs=147.7
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc--ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV--GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
......++++.+.++.++.+-..++.|+..++..... ......+.........+++.+. +++..+-+..+.|...++
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDL 459 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEET
T ss_pred CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC-CCEEEEEeCCCcEEEEEC
Confidence 3446778888877777888888888888887764321 1112334444456788999874 455566667889999998
Q ss_pred CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC---CCCCceE
Q psy13635 147 DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT---DLVEPRA 223 (357)
Q Consensus 147 ~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~---~~~~P~g 223 (357)
............ -....++++.+.+..|. +....+.|...+..+.....+... .......
T Consensus 460 ~~~~~~~~~~~h----------------~~~v~~~~~s~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 522 (694)
T 3dm0_A 460 AAGVSTRRFVGH----------------TKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 522 (694)
T ss_dssp TTTEEEEEEECC----------------SSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEECSSTTSCSSCEEE
T ss_pred CCCcceeEEeCC----------------CCCEEEEEEeCCCCEEE-EEeCCCEEEEEECCCCcceeeccCCCCCCCcEEE
Confidence 765433222111 12456788886555554 555567888888776655444332 1234678
Q ss_pred EEEeCCCC-EEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEe
Q psy13635 224 ITLSPAHG-YLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 224 iavd~~~g-~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~ 302 (357)
++++|... .+.++-... +.|...++........+.........+++++ ++++.++-...+.|...+.........+
T Consensus 523 ~~~~~~~~~~~l~s~s~d--~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 523 VRFSPNTLQPTIVSASWD--KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp EEECSCSSSCEEEEEETT--SCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred EEEeCCCCcceEEEEeCC--CeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 88987642 233333332 5788888876655555544455678999985 4555555556778888887544322111
Q ss_pred cCCCCceEEEEEEC-CEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 303 NENLPHVFGISLLG-DYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 303 ~~~~~~p~gia~~~-~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
..-.....+++.. +.+..+. ..+.|...+..+++....+
T Consensus 600 -~~~~~v~~~~~sp~~~~l~~~-~~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 600 -EANSVIHALCFSPNRYWLCAA-TEHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp -BCSSCEEEEEECSSSSEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred -cCCCcEEEEEEcCCCcEEEEE-cCCCEEEEECCCCCChhhh
Confidence 1222345566653 3322222 2345666666555544433
No 234
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.89 E-value=0.00016 Score=69.91 Aligned_cols=122 Identities=16% Similarity=0.167 Sum_probs=82.5
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCC---------------------CCEEEEEEcCCCc-------eEEEEecCCC-Cc--
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSE---------------------TNKLEVSSLDGKK-------RKVLYWEDID-QP-- 162 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~---------------------~~~I~~~~~~g~~-------~~~~~~~~~~-~p-- 162 (357)
..+..|+++++++.++.||++-.+ .++|+++..++.. -+.++..+-. ..
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 345689999999999999998543 2789998875532 1222221100 00
Q ss_pred ------ceeeeeccCcccccCCceEEEeCCCCeEEE-EeCC-----------CCeEEEEEcCCCceEEEecC-CCCCceE
Q psy13635 163 ------RAIASYKLPTIEVEHPDGVAVDWVARNLYW-TDTG-----------TDRIEVCRLEGTHRKVLVNT-DLVEPRA 223 (357)
Q Consensus 163 ------~~i~~~~~~~~~~~~p~glavD~~~~~lY~-td~~-----------~~~I~~~~~~g~~~~~~~~~-~~~~P~g 223 (357)
..+. ....|+.|++|++|+ .|.||+ +|.. .+.+++++++....+.++.. ....|+|
T Consensus 461 ~~~~g~~~~~----~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnG 535 (592)
T 4a9v_A 461 TPKGGSSNIT----PQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTG 535 (592)
T ss_dssp SGGGCCTTCC----TTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEE
T ss_pred ccccCccCcc----ccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccC
Confidence 0000 124688999999995 689999 8864 33799999864444444432 3568999
Q ss_pred EEEeCCCCEEEEEeCCC
Q psy13635 224 ITLSPAHGYLFWSDWNE 240 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~ 240 (357)
++++|+...||++-...
T Consensus 536 iafSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 536 ISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EEECTTSSEEEEEEEST
T ss_pred CEECCCCCEEEEEEeCC
Confidence 99999999999998764
No 235
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.89 E-value=0.012 Score=52.18 Aligned_cols=209 Identities=9% Similarity=-0.026 Sum_probs=113.8
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc-eeEEEEeCCcCCceeEEEEcC-CCeEEEEeCCCCEEEEEEc
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG-SKHNVITNGLITPDGLAIDWL-TEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~~~~~~~~~p~glavd~~-~~~ly~td~~~~~I~~~~~ 146 (357)
.......+++++.+..|. +-..++.|...+++..... .....+...-.....+++.+. .+.++++-..++.|...++
T Consensus 10 H~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~ 88 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVA-TCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEE 88 (351)
T ss_dssp CSSCEEEEEECSSSSEEE-EEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred cccceeEEEEcCCCCEEE-EeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEec
Confidence 345678889988655554 4445677888887754311 112233344456788888864 3556666666788988888
Q ss_pred CCCce-------EEEEecCCCCcceeeeeccCcccccCCceEEEeCCC-CeEEEEeCCCCeEEEEEcCCCce-EEE----
Q psy13635 147 DGKKR-------KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA-RNLYWTDTGTDRIEVCRLEGTHR-KVL---- 213 (357)
Q Consensus 147 ~g~~~-------~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~-~~lY~td~~~~~I~~~~~~g~~~-~~~---- 213 (357)
+.... +.+..- ...-....++++.+.. +.++++-...+.|...++..... ..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 154 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTL--------------NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS 154 (351)
T ss_dssp CTTSCTTSSCSEEEEEEE--------------CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE
T ss_pred CCCcccccccCcceeeee--------------cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc
Confidence 65421 111100 1111245678887662 34444545567888888654321 110
Q ss_pred --e------cCCCCCceEEEEeCC---CCEEEEEeCCCCCCeEEEEecCCCceEEE--eeCCCCCceEEEEecCCC---E
Q psy13635 214 --V------NTDLVEPRAITLSPA---HGYLFWSDWNEKRPKIERSLLNGGERVLL--VKDRLGWPNGITLDVDNE---K 277 (357)
Q Consensus 214 --~------~~~~~~P~giavd~~---~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~--~~~~l~~P~giaid~~~~---~ 277 (357)
. .........++++|. ...+..+... +.+............+ +...-....++++.+.++ .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~ 231 (351)
T 3f3f_A 155 EMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE---QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQ 231 (351)
T ss_dssp EEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT---EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSE
T ss_pred cccccccccCCcccceeEEEeccCCCCCcEEEEecCC---CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcce
Confidence 0 012345678888875 4555555544 2443333333322222 222234567899986542 5
Q ss_pred EEEEeCCCCeEEEEeCCC
Q psy13635 278 LYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 278 lY~~d~~~~~I~~~~~dG 295 (357)
++++-...+.|...+...
T Consensus 232 ~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 232 LIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EEEEEETTSCEEEEEEEE
T ss_pred EEEEEcCCCeEEEEeCCC
Confidence 666665667777777643
No 236
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.86 E-value=0.018 Score=57.65 Aligned_cols=239 Identities=13% Similarity=0.127 Sum_probs=140.5
Q ss_pred ccCCEEEEEeCCC----CeEEEEEcCCCCcceeEEEEeCC--c-----CCceeEEEEcCCCeEEEEeCC----CCEEEEE
Q psy13635 80 YKKSMVCWTDHGT----EMISCCTFDGNNVGSKHNVITNG--L-----ITPDGLAIDWLTEKLYWTDSE----TNKLEVS 144 (357)
Q Consensus 80 ~~~~~ly~~d~~~----~~I~~~~~~g~~~~~~~~~~~~~--~-----~~p~glavd~~~~~ly~td~~----~~~I~~~ 144 (357)
+.++++|++.... ..|++.+.++.. ..++... + ....++++.|.++.|.++... ...|++.
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~ 152 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQ----EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVI 152 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSC----CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCC----cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEE
Confidence 4578888775433 468998887664 3333321 1 135678899888887665432 2589999
Q ss_pred EcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC------------CeEEEEEcCCCce--
Q psy13635 145 SLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT------------DRIEVCRLEGTHR-- 210 (357)
Q Consensus 145 ~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~------------~~I~~~~~~g~~~-- 210 (357)
++++..... ...+ ... ...+++..+.+..||++.... ..|++.++.+...
T Consensus 153 dl~tg~~~~--~~~~-------------~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~ 216 (695)
T 2bkl_A 153 DVDSGEWSK--VDVI-------------EGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD 216 (695)
T ss_dssp ETTTCCBCS--SCCB-------------SCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC
T ss_pred ECCCCCCcC--Cccc-------------Ccc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc
Confidence 988764320 0000 000 115677777777888776532 3599998876542
Q ss_pred EEEecCC--CCCceEEEEeCCCCEEEEEeCCC-CCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC---C
Q psy13635 211 KVLVNTD--LVEPRAITLSPAHGYLFWSDWNE-KRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA---K 284 (357)
Q Consensus 211 ~~~~~~~--~~~P~giavd~~~g~Ly~~d~~~-~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~---~ 284 (357)
..+.... ...-.+++++|.+.+|+++.... ....|+..+..+...+.+.... ........ +.++ +|+... .
T Consensus 217 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~~~~~~~~-~~g~-l~~~s~~~~~ 293 (695)
T 2bkl_A 217 TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV-GAKYEVHA-WKDR-FYVLTDEGAP 293 (695)
T ss_dssp EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS-SCCEEEEE-ETTE-EEEEECTTCT
T ss_pred eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC-CceEEEEe-cCCc-EEEEECCCCC
Confidence 2333221 12345889999877787765442 1247888876555555554332 22222222 3555 777654 4
Q ss_pred CCeEEEEeCCCCCe---EEEecCC-CCceEEEEEECCEEEEEeCCCC--eEEEEeCccCceeEE
Q psy13635 285 TDKIEMIDFDGNNR---RELINEN-LPHVFGISLLGDYVYWTDWQRR--SIDRVNKITGNDREV 342 (357)
Q Consensus 285 ~~~I~~~~~dG~~~---~~i~~~~-~~~p~gia~~~~~ly~td~~~~--~I~~~~~~~g~~~~~ 342 (357)
..+|+.+++++... +.++... -....++++.++.++++....+ +|+.++. +|+....
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~-~g~~~~~ 356 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATL-KGKPVRT 356 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEET-TCCEEEE
T ss_pred CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC-CCCeeEE
Confidence 57999999976542 5555433 2345678888888888765443 4667776 4554433
No 237
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.018 Score=53.58 Aligned_cols=264 Identities=13% Similarity=0.035 Sum_probs=148.8
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCC---CCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDG---NNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g---~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
.....++++.+.++.++.+-..++.|...++.. .......... ..-..+..+++.+ .+.++++-...+.|...++
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~ 140 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKV 140 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECT-TSSEEEEEETTSEEEEEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEe
Confidence 467899999984455556666778888888765 2100001111 2335678899997 4455555556788888877
Q ss_pred ----CCCceEEEEecCCCCcceeeeeccCcc-cccCCceEE--EeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC--C
Q psy13635 147 ----DGKKRKVLYWEDIDQPRAIASYKLPTI-EVEHPDGVA--VDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT--D 217 (357)
Q Consensus 147 ----~g~~~~~~~~~~~~~p~~i~~~~~~~~-~~~~p~gla--vD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~--~ 217 (357)
.|.......... -+.+.+ .+. .-.....++ .. ..+.++++....+.|...++........... .
T Consensus 141 ~~~~~~~~~~~~~~~~---i~~~~~---~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 141 NHYQQESEVKFLNCEC---IRKINL---KNFGKNEYAVRMRAFVN-EEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEETTEEEEEEEEE---EEEEEG---GGGSSCCCEEEEEEEEC-SSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG
T ss_pred ccccCCceeeccccce---eEEEEc---cCcccccCceEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC
Confidence 343332221110 001100 000 001122222 22 2345566666677899998875444333332 2
Q ss_pred CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee-CCCCCceEEEEec---CCCEEEEEeCCCCeEEEEeC
Q psy13635 218 LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-DRLGWPNGITLDV---DNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 218 ~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-~~l~~P~giaid~---~~~~lY~~d~~~~~I~~~~~ 293 (357)
......++++|....|+.+... +.|...++........+. ..-.....+++.+ .++.+.++-...+.|...+.
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTR---GIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETT---SCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCceEEEEECCCCCEEEEEcCC---CeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 3578899999875556655554 578777776544333322 2222345665543 24556666666778888888
Q ss_pred CCCC-eEEEecC-------------------------CCCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 294 DGNN-RRELINE-------------------------NLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 294 dG~~-~~~i~~~-------------------------~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
.... ...+... .......+++.++.++++-...+.|...+..+++....+..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 291 VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEec
Confidence 6433 2222211 01113457777778888887888999999877877766653
No 238
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.84 E-value=0.031 Score=55.70 Aligned_cols=225 Identities=8% Similarity=0.003 Sum_probs=133.9
Q ss_pred CCcEEEEEcCCCCc-----ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEE
Q psy13635 49 SKDIRIANLSRPLK-----PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLA 123 (357)
Q Consensus 49 ~~~i~~~~~~~~~~-----~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~gla 123 (357)
+..|+..++..... ...+.........+++++.+..| .+-..++.|+..++.... ....+........+++
T Consensus 404 D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l-~sgs~Dg~v~vwd~~~~~---~~~~~~~h~~~v~~~~ 479 (694)
T 3dm0_A 404 DKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFA-LSGSWDGELRLWDLAAGV---STRRFVGHTKDVLSVA 479 (694)
T ss_dssp TSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEE
T ss_pred CCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEE-EEEeCCCcEEEEECCCCc---ceeEEeCCCCCEEEEE
Confidence 45688888865321 12233455567889999865544 455567889988887653 2333444445678899
Q ss_pred EEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC-CeEEEEeCCCCeEEE
Q psy13635 124 IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA-RNLYWTDTGTDRIEV 202 (357)
Q Consensus 124 vd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~-~~lY~td~~~~~I~~ 202 (357)
+.+.++.| ++-+..+.|...+..+.....+...... .-....++++.+.. +.++++....+.|..
T Consensus 480 ~s~~~~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~~l~s~s~d~~v~v 545 (694)
T 3dm0_A 480 FSLDNRQI-VSASRDRTIKLWNTLGECKYTISEGGEG-------------HRDWVSCVRFSPNTLQPTIVSASWDKTVKV 545 (694)
T ss_dssp ECTTSSCE-EEEETTSCEEEECTTSCEEEEECSSTTS-------------CSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred EeCCCCEE-EEEeCCCEEEEEECCCCcceeeccCCCC-------------CCCcEEEEEEeCCCCcceEEEEeCCCeEEE
Confidence 99755554 5555678888888766544333211110 11234567776554 245566666778988
Q ss_pred EEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEe
Q psy13635 203 CRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCD 282 (357)
Q Consensus 203 ~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d 282 (357)
.++..................++++|....|..+... +.|...++........+ ..-.....+++.+.+..|..+.
T Consensus 546 wd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~D---g~i~iwd~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 546 WNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD---GVVLLWDLAEGKKLYSL-EANSVIHALCFSPNRYWLCAAT 621 (694)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SBCEEEETTTTEEEECC-BCSSCEEEEEECSSSSEEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCceEEEe-cCCCcEEEEEEcCCCcEEEEEc
Confidence 8887655544444444567899999875555444433 47777777654332222 1223457888875444343333
Q ss_pred CCCCeEEEEeCCCCC
Q psy13635 283 AKTDKIEMIDFDGNN 297 (357)
Q Consensus 283 ~~~~~I~~~~~dG~~ 297 (357)
.+.|...++....
T Consensus 622 --~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 622 --EHGIKIWDLESKS 634 (694)
T ss_dssp --TTEEEEEETTTTE
T ss_pred --CCCEEEEECCCCC
Confidence 4557777776543
No 239
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.83 E-value=0.015 Score=51.72 Aligned_cols=209 Identities=11% Similarity=0.022 Sum_probs=121.0
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcc--eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVG--SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
.-....+|+++|.++.+..+-..++.|...++...... .....+...-..+..+++.+.+..| .+-...+.|...+.
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l-~s~~~d~~i~~~~~ 115 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFA-LSGSWDGTLRLWDL 115 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEET
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEE-EEEcccccceEEee
Confidence 34568899999887777777777787877777654311 1122333334567889999755444 45555778888887
Q ss_pred CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC-CCCCceEEE
Q psy13635 147 DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT-DLVEPRAIT 225 (357)
Q Consensus 147 ~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~-~~~~P~gia 225 (357)
............. .........+.+..|+ +....+.+...+..+......... .......++
T Consensus 116 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~-s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~ 178 (340)
T 4aow_A 116 TTGTTTRRFVGHT----------------KDVLSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVR 178 (340)
T ss_dssp TTTEEEEEEECCS----------------SCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEECSSSCSSCEEEEE
T ss_pred cccceeeeecCCC----------------CceeEEEEeecCccce-eecCCCeEEEEEeCCCceEEEEeccccCcccceE
Confidence 7665444332211 1233344444444444 444456677777666554443322 234456677
Q ss_pred EeCCCCE-EEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe
Q psy13635 226 LSPAHGY-LFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR 298 (357)
Q Consensus 226 vd~~~g~-Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~ 298 (357)
+.+.... ++.+-... +.|...++............-....++++++.+. ++++-...+.|...+......
T Consensus 179 ~~~~~~~~~~~s~~~d--~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWD--KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp ECSCSSSCEEEEEETT--SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEE
T ss_pred EccCCCCcEEEEEcCC--CEEEEEECCCCceeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCce
Confidence 7655433 33443332 5777777776655444434444568899986544 444545567888888765443
No 240
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.82 E-value=0.0054 Score=61.47 Aligned_cols=245 Identities=13% Similarity=0.070 Sum_probs=138.8
Q ss_pred EEeecCCCCeEEEEEeC------CcEEEEEcCCCCcc-eEeccCCCcEEEEEEEccCCEEEEEeCCC------------C
Q psy13635 33 YALSHHVAAQMLLFATS------KDIRIANLSRPLKP-VTIIKDLEEGAAIDYYYKKSMVCWTDHGT------------E 93 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~------~~i~~~~~~~~~~~-~~~~~~~~~~~~i~~d~~~~~ly~~d~~~------------~ 93 (357)
.+.+-++....|.|+.. ..|+.+|+.++... ........ ..++++.+++..|+++.... .
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 34455566666776652 46999999875432 11122221 15788999888898886532 3
Q ss_pred eEEEEEcCCCCcceeEEEEeCCc---CCceeEEEEcCCCeEEEEeCC---CCEEEEEEcCCCceEEEEecCCCCcceeee
Q psy13635 94 MISCCTFDGNNVGSKHNVITNGL---ITPDGLAIDWLTEKLYWTDSE---TNKLEVSSLDGKKRKVLYWEDIDQPRAIAS 167 (357)
Q Consensus 94 ~I~~~~~~g~~~~~~~~~~~~~~---~~p~glavd~~~~~ly~td~~---~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~ 167 (357)
.|++.++.+.. ....++...- ....++++++.++.|+++... ...|+..+..+...+.+....
T Consensus 203 ~v~~~~l~t~~--~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~--------- 271 (695)
T 2bkl_A 203 TIRYHTLGTEP--SKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV--------- 271 (695)
T ss_dssp EEEEEETTSCG--GGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS---------
T ss_pred EEEEEECCCCc--hhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC---------
Confidence 49999987663 1122332221 234578899888888776533 346777766444444443211
Q ss_pred eccCcccccCCceEEEeCCCCeEEEEeC---CCCeEEEEEcCCCce---EEEecCC-CCCceEEEEeCCCCEEEEEeCCC
Q psy13635 168 YKLPTIEVEHPDGVAVDWVARNLYWTDT---GTDRIEVCRLEGTHR---KVLVNTD-LVEPRAITLSPAHGYLFWSDWNE 240 (357)
Q Consensus 168 ~~~~~~~~~~p~glavD~~~~~lY~td~---~~~~I~~~~~~g~~~---~~~~~~~-~~~P~giavd~~~g~Ly~~d~~~ 240 (357)
......+ .+.++ +|+... ...+|.++++++... +.++... -....+++++ ++.|+++....
T Consensus 272 --------~~~~~~~-~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~d 339 (695)
T 2bkl_A 272 --------GAKYEVH-AWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKD 339 (695)
T ss_dssp --------SCCEEEE-EETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEET
T ss_pred --------CceEEEE-ecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEEC
Confidence 0111222 23455 776543 246899999875442 4555432 2335677777 57787776543
Q ss_pred CCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeC---CCCeEEEEeCCCCCeEEE
Q psy13635 241 KRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDA---KTDKIEMIDFDGNNRREL 301 (357)
Q Consensus 241 ~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~---~~~~I~~~~~dG~~~~~i 301 (357)
...+|+..+++|.....+.........+++.++.+..++++-. ..+.|+..++++...+.+
T Consensus 340 g~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 340 ATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp TEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 2358888888876544432111222344555555566665432 235788888876555444
No 241
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.82 E-value=0.02 Score=52.88 Aligned_cols=241 Identities=8% Similarity=0.019 Sum_probs=135.6
Q ss_pred EeecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE
Q psy13635 34 ALSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI 112 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 112 (357)
++.-++...+|+.+. ...|+..|+.................++++.+.+..|+ +-..++.|+..++.... ....
T Consensus 128 ~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~----~~~~ 202 (393)
T 1erj_A 128 SVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQ----CSLT 202 (393)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE----EEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCe----eEEE
Confidence 444455555666555 45688899976443344444566788999998766665 55566788888887653 2222
Q ss_pred eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE
Q psy13635 113 TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW 192 (357)
Q Consensus 113 ~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~ 192 (357)
...-..+..+++.+..+.++.+....+.|...++................ ..--....++++.+.+..| +
T Consensus 203 ~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~---------~~h~~~v~~v~~~~~g~~l-~ 272 (393)
T 1erj_A 203 LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG---------TGHKDSVYSVVFTRDGQSV-V 272 (393)
T ss_dssp EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------------CCCSSCEEEEEECTTSSEE-E
T ss_pred EEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCC---------CCCCCCEEEEEECCCCCEE-E
Confidence 22234567888887667777777778889998876544322211100000 0011245678888655555 4
Q ss_pred EeCCCCeEEEEEcCCCc------------eEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee
Q psy13635 193 TDTGTDRIEVCRLEGTH------------RKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK 260 (357)
Q Consensus 193 td~~~~~I~~~~~~g~~------------~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~ 260 (357)
+....+.|...++.... ..............+++++.+..|..+... +.|...+.........+.
T Consensus 273 s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D---~~v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 273 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD---RGVLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT---SEEEEEETTTCCEEEEEE
T ss_pred EEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC---CeEEEEECCCCeEEEEEC
Confidence 55556777777765321 111111223446778888765555444333 477777776554444443
Q ss_pred CCCCCceEEEEecC-----CCEEEEEeCCCCeEEEEe
Q psy13635 261 DRLGWPNGITLDVD-----NEKLYWCDAKTDKIEMID 292 (357)
Q Consensus 261 ~~l~~P~giaid~~-----~~~lY~~d~~~~~I~~~~ 292 (357)
..-.....+++.+. ++.++++-...+.|..-+
T Consensus 350 ~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 350 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 33344566666431 355666655555555544
No 242
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.81 E-value=0.017 Score=51.74 Aligned_cols=230 Identities=11% Similarity=0.025 Sum_probs=127.2
Q ss_pred eEEEEEe-CCcEEEEEcCCCC-cceEeccCCCcEEEEEEEc-----cCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC
Q psy13635 42 QMLLFAT-SKDIRIANLSRPL-KPVTIIKDLEEGAAIDYYY-----KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN 114 (357)
Q Consensus 42 ~~l~~~~-~~~i~~~~~~~~~-~~~~~~~~~~~~~~i~~d~-----~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 114 (357)
.+++.+. ...|+..|+.... .............++++.+ .++....+...++.|...++..... ....+..
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~ 158 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD--PVANMEP 158 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS--CSEEECC
T ss_pred ceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC--cceeccc
Confidence 4455554 5579999998754 3444444556677886542 2344445555667888888876531 1222211
Q ss_pred --C--cCCceeEE----EEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeC-
Q psy13635 115 --G--LITPDGLA----IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDW- 185 (357)
Q Consensus 115 --~--~~~p~gla----vd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~- 185 (357)
+ ......++ +++ .+.++++....+.|...++............ .....+++++
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----------------~~v~~~~~~~~ 220 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNIK-----------------NGVCSLEFDRK 220 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEECS-----------------SCEEEEEESCS
T ss_pred cCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecCCC-----------------CceEEEEcCCC
Confidence 1 12345555 344 4555566666789999998776553332111 2467788887
Q ss_pred --CCCeEEEEeCCCCeEEEEEcCCCce-EEE----ecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce---
Q psy13635 186 --VARNLYWTDTGTDRIEVCRLEGTHR-KVL----VNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER--- 255 (357)
Q Consensus 186 --~~~~lY~td~~~~~I~~~~~~g~~~-~~~----~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~--- 255 (357)
.++.|+ +....+.|...++..... ..+ ..........++++|.+..++++-... +.|...++.....
T Consensus 221 ~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~ 297 (357)
T 3i2n_A 221 DISMNKLV-ATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA--GGLHLWKYEYPIQRSK 297 (357)
T ss_dssp SSSCCEEE-EEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT--SEEEEEEEECCSCC--
T ss_pred CCCCCEEE-EECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC--CcEEEeecCCCccccc
Confidence 444544 445557788777653221 111 113345678999998644355554442 4666665542211
Q ss_pred ----------------EEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 256 ----------------VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 256 ----------------~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
.......-....++++.+.+..|.++-...+.|...+..
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 298 KDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 111222334457888876666666555556667666553
No 243
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.81 E-value=0.017 Score=51.69 Aligned_cols=230 Identities=10% Similarity=0.031 Sum_probs=136.1
Q ss_pred ecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC
Q psy13635 36 SHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN 114 (357)
Q Consensus 36 ~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 114 (357)
.-++...+++-+. +..|+..|+..+..............++++++.+. +..+-..++.|...++.+.. ...+..
T Consensus 72 ~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~~----~~~~~~ 146 (319)
T 3frx_A 72 TLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQC----LATLLG 146 (319)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSCE----EEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCe----EEEEec
Confidence 3344555555555 56789999977554444555666788999998554 45565667788888887652 333333
Q ss_pred CcCCceeEEEEcC-----CCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 115 GLITPDGLAIDWL-----TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 115 ~~~~p~glavd~~-----~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
.......+++.+. .+.++++-...+.|...++........... --.....+++.+.+ .
T Consensus 147 h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~----------------h~~~v~~~~~sp~g-~ 209 (319)
T 3frx_A 147 HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG----------------HNSNINTLTASPDG-T 209 (319)
T ss_dssp CSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECC----------------CCSCEEEEEECTTS-S
T ss_pred cCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecC----------------CCCcEEEEEEcCCC-C
Confidence 3344566676543 233566666778888888865543322211 11245678888654 4
Q ss_pred EEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-------
Q psy13635 190 LYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR------- 262 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~------- 262 (357)
++++-...+.|..-++.......... .......++++|....|..+... .+...+++.......+...
T Consensus 210 ~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~la~~~~~----~i~v~~~~~~~~~~~~~~~~~~~~~~ 284 (319)
T 3frx_A 210 LIASAGKDGEIMLWNLAAKKAMYTLS-AQDEVFSLAFSPNRYWLAAATAT----GIKVFSLDPQYLVDDLRPEFAGYSKA 284 (319)
T ss_dssp EEEEEETTCEEEEEETTTTEEEEEEE-CCSCEEEEEECSSSSEEEEEETT----EEEEEEETTEEEEEEECCCCTTCCGG
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEec-CCCcEEEEEEcCCCCEEEEEcCC----CcEEEEeCcCeeeeccCccccccccC
Confidence 55565566789998887654433333 23567899999976666555533 5666666544333222221
Q ss_pred -CCCceEEEEecCCCEEEEEeCCCCeEEEEeC
Q psy13635 263 -LGWPNGITLDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 263 -l~~P~giaid~~~~~lY~~d~~~~~I~~~~~ 293 (357)
-.....+++.+++..|+... ..+.|...+.
T Consensus 285 ~~~~v~~~~~spdg~~l~sg~-~Dg~i~vWd~ 315 (319)
T 3frx_A 285 AEPHAVSLAWSADGQTLFAGY-TDNVIRVWQV 315 (319)
T ss_dssp GCCCEEEEEECTTSSEEEEEE-TTSCEEEEEE
T ss_pred cCcceeEEEECCCCCEEEEee-cCceEEEEEE
Confidence 12346788886655555443 4555655543
No 244
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.79 E-value=0.019 Score=51.51 Aligned_cols=259 Identities=11% Similarity=0.013 Sum_probs=136.1
Q ss_pred EeecCCC---CeEEEEEe-CCcEEEEEcCC-CCcc-eEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcce
Q psy13635 34 ALSHHVA---AQMLLFAT-SKDIRIANLSR-PLKP-VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGS 107 (357)
Q Consensus 34 ~~~~~~~---~~~l~~~~-~~~i~~~~~~~-~~~~-~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~ 107 (357)
|++-++. ..+|+.+. ...|+..|+.. +... ............+++.+.+..|+ +-..++.|...+++...
T Consensus 44 ~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~--- 119 (368)
T 3mmy_A 44 CLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF-TASCDKTAKMWDLSSNQ--- 119 (368)
T ss_dssp EEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE---
T ss_pred EEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE-EEcCCCcEEEEEcCCCC---
Confidence 3444444 25565555 45688888875 2332 33344566788999998666665 44456789988988764
Q ss_pred eEEEEeCCcCCceeEEE--EcCCCeEEEEeCCCCEEEEEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEe
Q psy13635 108 KHNVITNGLITPDGLAI--DWLTEKLYWTDSETNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVD 184 (357)
Q Consensus 108 ~~~~~~~~~~~p~glav--d~~~~~ly~td~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD 184 (357)
.......-.....+++ ++ .+.++++-..++.|...++..... ..+. . ....++++
T Consensus 120 -~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~-------------------~~~~~~~~ 177 (368)
T 3mmy_A 120 -AIQIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQ-L-------------------PERCYCAD 177 (368)
T ss_dssp -EEEEEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEE-C-------------------SSCEEEEE
T ss_pred -ceeeccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEe-c-------------------CCCceEEE
Confidence 2223333456788888 54 556666666678999998765433 2221 1 11233444
Q ss_pred CCCCeEEEEeCCCCeEEEEEcCCCceEEEecC-C-CCCceEEEEeCCCC---E-EEEEeCCCCCCeEEEEecCCCc---e
Q psy13635 185 WVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT-D-LVEPRAITLSPAHG---Y-LFWSDWNEKRPKIERSLLNGGE---R 255 (357)
Q Consensus 185 ~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~-~-~~~P~giavd~~~g---~-Ly~~d~~~~~~~I~~~~~dg~~---~ 255 (357)
+....++.+.. .+.+...+.+.......... . ......+++.+... . ++.+... +.|...+++... .
T Consensus 178 ~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---g~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 178 VIYPMAVVATA-ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE---GRVAIHYINPPNPAKD 253 (368)
T ss_dssp EETTEEEEEEG-GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT---SEEEEEESSCSCHHHH
T ss_pred ecCCeeEEEeC-CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC---CcEEEEecCCCCcccc
Confidence 44445554443 34566666654432221111 1 11122222221111 1 2222222 355555554431 1
Q ss_pred EEEeeCCC------------CCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC--CEEEE
Q psy13635 256 VLLVKDRL------------GWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLLG--DYVYW 321 (357)
Q Consensus 256 ~~~~~~~l------------~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~--~~ly~ 321 (357)
...+.... ....++++++.+..|+.+ ...+.|...+.........+.........+++.. ..|..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV-GSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAY 332 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEE-ETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEE
T ss_pred ceeeeeeecccccccccccccceEEEEEecCCCEEEEE-ccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEE
Confidence 11111111 146789998755555554 4567899999876544444433344567788763 34444
Q ss_pred Ee
Q psy13635 322 TD 323 (357)
Q Consensus 322 td 323 (357)
+.
T Consensus 333 ~s 334 (368)
T 3mmy_A 333 AS 334 (368)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 245
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.73 E-value=0.027 Score=51.68 Aligned_cols=258 Identities=9% Similarity=0.027 Sum_probs=146.7
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
......+++|.+.+.. ..+-..++.|...+..... ....+.........+++++. ++...+-...+.|...++..
T Consensus 65 H~~~V~~~~~sp~~~~-l~s~s~D~~v~iWd~~~~~---~~~~~~~h~~~v~~~~~s~~-g~~las~~~d~~v~iw~~~~ 139 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNW-IVSASQDGRLIVWNALTSQ---KTHAIKLHCPWVMECAFAPN-GQSVACGGLDSACSIFNLSS 139 (380)
T ss_dssp CSSCEEEEEECTTSSC-EEEEETTSEEEEEETTTTE---EEEEEECCCTTCCCCEECTT-SSEEEECCSSSCCEEEECCC
T ss_pred cccEEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCc---cceEEecCCCCEEEEEECCC-CCEEEEeeCCCcEEEEECCC
Confidence 4456789999986554 4555567788888887653 23344444456788899975 45555666677777777643
Q ss_pred CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec-----CCCCCceE
Q psy13635 149 KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN-----TDLVEPRA 223 (357)
Q Consensus 149 ~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~-----~~~~~P~g 223 (357)
..... ......+.+ ..--.....+++.+..+..+++....+.|...++.......... ........
T Consensus 140 ~~~~~---~~~~~~~~~------~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 140 QADRD---GNMPVSRVL------TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS 210 (380)
T ss_dssp CSSCC---CSSTTCCBC------CCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred Ccccc---CCccceeec------cCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence 21100 000000000 00001233344444445555566677788888876544333331 12334667
Q ss_pred EEEeCCCCEEEEEeCCCCCCeEEEEecCC-CceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEe
Q psy13635 224 ITLSPAHGYLFWSDWNEKRPKIERSLLNG-GERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELI 302 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~~~~~I~~~~~dg-~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~ 302 (357)
+++.+.++.++.+-... +.|...++.. ......+...-.....+++.+ ++..+++-...+.|...+..........
T Consensus 211 ~~~~~~~~~~l~sgs~D--~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 211 LSINSLNANMFISGSCD--TTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp EEECSSSCCEEEEEETT--SCEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred EEeecCCCCEEEEEECC--CeEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 88877667676666553 4777777652 222222333344568999985 4555666677788999988654433333
Q ss_pred cCC-------CCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 303 NEN-------LPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 303 ~~~-------~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
... ......+++. .+.+.++-...+.|+..+..+++....+
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 211 1124567775 4556666666788888887566655444
No 246
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.73 E-value=0.04 Score=55.13 Aligned_cols=243 Identities=12% Similarity=0.125 Sum_probs=134.2
Q ss_pred cEEEEEEEccCCEEEEE-eCCC---CeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCC----------
Q psy13635 72 EGAAIDYYYKKSMVCWT-DHGT---EMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSE---------- 137 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~-d~~~---~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~---------- 137 (357)
...++.+++++.+|-++ +... ..|+..++++... ....+. +. .-.+++.. .++.||++...
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~--~~~~~~-~~-k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP--LETPLK-DV-KFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE--EEEEEE-EE-ESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC--CccccC-Cc-eeccEEEe-CCCEEEEEEecCccccccccc
Confidence 46678899988877555 4332 3688899987751 111121 11 11345555 57778887643
Q ss_pred --CCEEEEEEcCCCce--EEEEecCCC-CcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC---CCeEEEEEcCCC-
Q psy13635 138 --TNKLEVSSLDGKKR--KVLYWEDID-QPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG---TDRIEVCRLEGT- 208 (357)
Q Consensus 138 --~~~I~~~~~~g~~~--~~~~~~~~~-~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~---~~~I~~~~~~g~- 208 (357)
..+|++.++..... +.+.... . .+ ..-.++++.+.++.|+++... .+.|+..++++.
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~-~~~~-------------~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAI-PAQH-------------HRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN 270 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCS-GGGC-------------CSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT
T ss_pred CCCcEEEEEECCCCcccceEEEecC-CCCC-------------eEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC
Confidence 24577777654322 2232111 0 00 012356777777778766432 248899987654
Q ss_pred -ceEEEecCCCCCceEEEEeCCCCEEEEEeCCC-CCCeEEEEecCCCce---EEEeeCCCCCceEEEEecCCCEEEEEeC
Q psy13635 209 -HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNE-KRPKIERSLLNGGER---VLLVKDRLGWPNGITLDVDNEKLYWCDA 283 (357)
Q Consensus 209 -~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~-~~~~I~~~~~dg~~~---~~~~~~~l~~P~giaid~~~~~lY~~d~ 283 (357)
....+.... ..-... +++.++.||+..... .+.+|+++++++... +.++...-... .+++.++.|+++..
T Consensus 271 ~~~~~l~~~~-~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 271 APLLTVQGDL-DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL---TVHSGSGYLFAEYM 345 (693)
T ss_dssp CCCEEEECSS-SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE---EEEEETTEEEEEEE
T ss_pred CceEEEeCCC-CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE---EEEEECCEEEEEEE
Confidence 333443322 221222 455578888776442 247999999987654 55554432222 44456788887754
Q ss_pred CC--CeEEEEeCCCCCeEEEecCCCCceEEEEEE--CCEEEEEeC---CCCeEEEEeCccCc
Q psy13635 284 KT--DKIEMIDFDGNNRRELINENLPHVFGISLL--GDYVYWTDW---QRRSIDRVNKITGN 338 (357)
Q Consensus 284 ~~--~~I~~~~~dG~~~~~i~~~~~~~p~gia~~--~~~ly~td~---~~~~I~~~~~~~g~ 338 (357)
.. .+|+.++++|...+.+.........+++.. ++.++++-. ..++|+.++..+|+
T Consensus 346 ~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 346 VDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp ETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred ECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 43 478999999876655532222222333332 345554422 22678888764444
No 247
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.72 E-value=0.043 Score=53.90 Aligned_cols=280 Identities=11% Similarity=0.003 Sum_probs=157.7
Q ss_pred EEeecCCCCeEEEEEe-CCcEEEEEcCCCC-cceE-eccCCCcEEEEEEEccCCEEEEEeCCC---CeEEEEEcCCCCcc
Q psy13635 33 YALSHHVAAQMLLFAT-SKDIRIANLSRPL-KPVT-IIKDLEEGAAIDYYYKKSMVCWTDHGT---EMISCCTFDGNNVG 106 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~-~~~~-~~~~~~~~~~i~~d~~~~~ly~~d~~~---~~I~~~~~~g~~~~ 106 (357)
.+++-++...+|.-+. ...|+..|+.... .... .........+++|++.+..|..+.... +.|+..+. |..
T Consensus 63 ~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~-- 139 (611)
T 1nr0_A 63 TVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTS-- 139 (611)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCB--
T ss_pred EEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCC--
Confidence 3444455556665555 4568888985422 2222 223345688999999888777665433 24444432 221
Q ss_pred eeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 107 SKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 107 ~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
...+...-.....+++.+.+...+.+-...+.|...+.........+. + --.....+++.+.
T Consensus 140 --~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-~---------------H~~~V~~v~fspd 201 (611)
T 1nr0_A 140 --NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-E---------------HTKFVHSVRYNPD 201 (611)
T ss_dssp --CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-C---------------CSSCEEEEEECTT
T ss_pred --cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-c---------------ccCceEEEEECCC
Confidence 122233334678899988666667777778888888865432222211 1 1124677888864
Q ss_pred CCeEEEEeCCCCeEEEEEcC-CCceEEEec------CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe
Q psy13635 187 ARNLYWTDTGTDRIEVCRLE-GTHRKVLVN------TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV 259 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~-g~~~~~~~~------~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~ 259 (357)
+.++.+-...+.|...+.. |+....+.. .......+++++|.+..|.-+... +.|...++........+
T Consensus 202 -g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 202 -GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVATLKVEKTI 277 (611)
T ss_dssp -SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCCCCceeeee
Confidence 4566666667788888865 443333322 223467899999875555544433 47777777654333322
Q ss_pred eCCC---CCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCc
Q psy13635 260 KDRL---GWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 260 ~~~l---~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~ 335 (357)
.... ....++.. .+...++-...+.|...+..................++++. ++....+-...+.|...+..
T Consensus 278 ~~~~~~~~~~~~~~~---~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 278 PVGTRIEDQQLGIIW---TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp ECCSSGGGCEEEEEE---CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCCCccceeEEEEE---cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Confidence 2211 12234444 23344444556677777776544433444444556778876 34444444455788777765
Q ss_pred cCcee
Q psy13635 336 TGNDR 340 (357)
Q Consensus 336 ~g~~~ 340 (357)
+++..
T Consensus 355 ~~~~~ 359 (611)
T 1nr0_A 355 TGISN 359 (611)
T ss_dssp TCCEE
T ss_pred CCcee
Confidence 55543
No 248
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.71 E-value=0.0028 Score=63.52 Aligned_cols=289 Identities=9% Similarity=-0.026 Sum_probs=150.4
Q ss_pred EeecCCCCeEEEEEeC----------CcEEEEEcCCCCcc--eEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcC
Q psy13635 34 ALSHHVAAQMLLFATS----------KDIRIANLSRPLKP--VTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD 101 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~----------~~i~~~~~~~~~~~--~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~ 101 (357)
+++-+++..+|+++.. ..|+..|++++... ..+ ......++++|++..|.++. ++.|+..++.
T Consensus 64 ~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~--~~~i~~~~~~ 138 (719)
T 1z68_A 64 NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY--QNNIYLKQRP 138 (719)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE--TTEEEEESST
T ss_pred eEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE--CCeEEEEeCC
Confidence 4445556667777764 57899999774320 111 13456788999888887774 4688888887
Q ss_pred CCCcceeEEEEeCCc------------------CCceeEEEEcCCCeEEEEeCCCC------------------------
Q psy13635 102 GNNVGSKHNVITNGL------------------ITPDGLAIDWLTEKLYWTDSETN------------------------ 139 (357)
Q Consensus 102 g~~~~~~~~~~~~~~------------------~~p~glavd~~~~~ly~td~~~~------------------------ 139 (357)
+.. ...+...+- ....++++.|.++.|+++.....
T Consensus 139 ~g~---~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp 215 (719)
T 1z68_A 139 GDP---PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215 (719)
T ss_dssp TSC---CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred CCC---cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence 654 122221221 12257899988888877643211
Q ss_pred ---------EEEEEEcCCCceE-EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEE--eCCC--CeEEEEE-
Q psy13635 140 ---------KLEVSSLDGKKRK-VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWT--DTGT--DRIEVCR- 204 (357)
Q Consensus 140 ---------~I~~~~~~g~~~~-~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~t--d~~~--~~I~~~~- 204 (357)
.|...++++.... .+ .+..|..+ ...-.....+++.+. +++.++ +... ..|..++
T Consensus 216 ~~g~~~~~~~l~~~d~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~ 285 (719)
T 1z68_A 216 KAGAKNPVVRIFIIDTTYPAYVGPQ---EVPVPAMI------ASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDF 285 (719)
T ss_dssp BTTSCCCEEEEEEEESSCHHHHCCE---ECCCCHHH------HTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCCcccee---EccCCccC------CCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcc
Confidence 3444444433210 00 00000000 000112356677766 566555 3332 2588888
Q ss_pred ---cCCCceEEEe----cCC---CC--CceEEEEeCCCCEEEEE-eCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEE
Q psy13635 205 ---LEGTHRKVLV----NTD---LV--EPRAITLSPAHGYLFWS-DWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITL 271 (357)
Q Consensus 205 ---~~g~~~~~~~----~~~---~~--~P~giavd~~~g~Ly~~-d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giai 271 (357)
.++.....+. ... .. .+..++++|.+..|++. .......+|+..++++.....+.. +-....++..
T Consensus 286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~-~~~~v~~~~~ 364 (719)
T 1z68_A 286 REDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITS-GKWEAINIFR 364 (719)
T ss_dssp CSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSC-SSSCEEEEEE
T ss_pred cCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEeccc-CceEEEEEEE
Confidence 6544333222 111 11 11267888876667663 322223589999988876555432 2222345555
Q ss_pred ecCCCEEEEEeCC------CCeEEEEeCCCCC--eEEEecCCCC----ceEEEEEE--CCEEEEEeCC--CCeEEEEeCc
Q psy13635 272 DVDNEKLYWCDAK------TDKIEMIDFDGNN--RRELINENLP----HVFGISLL--GDYVYWTDWQ--RRSIDRVNKI 335 (357)
Q Consensus 272 d~~~~~lY~~d~~------~~~I~~~~~dG~~--~~~i~~~~~~----~p~gia~~--~~~ly~td~~--~~~I~~~~~~ 335 (357)
. .++.||++... ...++.++.++.. .+.+ ...+. ....+++. ++.++++... ...++..+..
T Consensus 365 ~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l-~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~ 442 (719)
T 1z68_A 365 V-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCV-TCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGR 442 (719)
T ss_dssp E-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEES-STTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSS
T ss_pred E-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceec-cCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECC
Confidence 4 68889888754 3578888885542 2322 21111 12234443 3455544322 2355666665
Q ss_pred cCceeEEE
Q psy13635 336 TGNDREVI 343 (357)
Q Consensus 336 ~g~~~~~i 343 (357)
+|+...++
T Consensus 443 ~g~~~~~~ 450 (719)
T 1z68_A 443 TDQEIKIL 450 (719)
T ss_dssp SCCEEEEE
T ss_pred CCCEEEEe
Confidence 66654444
No 249
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.68 E-value=0.00057 Score=66.02 Aligned_cols=114 Identities=17% Similarity=0.184 Sum_probs=82.3
Q ss_pred cccccCCceEEEeCCCCeEEEEeCCC---------------------CeEEEEEcCCCc-------eEEEe-c-------
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTGT---------------------DRIEVCRLEGTH-------RKVLV-N------- 215 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~~---------------------~~I~~~~~~g~~-------~~~~~-~------- 215 (357)
...+..|+++++++.++.+|++-.++ +.|++...++.. -..++ .
T Consensus 380 AT~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~ 459 (592)
T 4a9v_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHA 459 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTST
T ss_pred CccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccc
Confidence 45567899999999999999986431 578888876432 12222 1
Q ss_pred -------------CCCCCceEEEEeCCCCEEEE-EeCCC---------CCCeEEEEecCCCceEEEeeC-CCCCceEEEE
Q psy13635 216 -------------TDLVEPRAITLSPAHGYLFW-SDWNE---------KRPKIERSLLNGGERVLLVKD-RLGWPNGITL 271 (357)
Q Consensus 216 -------------~~~~~P~giavd~~~g~Ly~-~d~~~---------~~~~I~~~~~dg~~~~~~~~~-~l~~P~giai 271 (357)
..+..|.+|++|+. |.||+ +|... .+..+++.+.+......++.. ....|+|+++
T Consensus 460 ~~~~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiaf 538 (592)
T 4a9v_A 460 GTPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISF 538 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEE
T ss_pred cccccCccCccccCccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEE
Confidence 12688999999975 99999 77531 124899999865555555543 3578999999
Q ss_pred ecCCCEEEEEeCCCC
Q psy13635 272 DVDNEKLYWCDAKTD 286 (357)
Q Consensus 272 d~~~~~lY~~d~~~~ 286 (357)
.+++..||++-+.-+
T Consensus 539 SPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 539 SPDQKTLFVGIQHPG 553 (592)
T ss_dssp CTTSSEEEEEEESTT
T ss_pred CCCCCEEEEEEeCCC
Confidence 999999999875443
No 250
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.65 E-value=0.033 Score=50.59 Aligned_cols=260 Identities=11% Similarity=0.062 Sum_probs=153.6
Q ss_pred cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 68 KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
.......++++.+.... ..+-..++.|...+..... ....+.........+++.+ .+....+-...+.|...++.
T Consensus 62 gH~~~V~~~~~s~d~~~-l~s~s~Dg~v~vWd~~~~~---~~~~~~~~~~~v~~~~~sp-~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRR-IVSSSQDGKVIVWDSFTTN---KEHAVTMPCTWVMACAYAP-SGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp CCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTCC---EEEEEECSSSCCCEEEECT-TSSEEEEESTTSEEEEEECC
T ss_pred CCCCeEEEEEECCCCCE-EEEEeCCCeEEEEECCCCC---cceEEecCCCCEEEEEECC-CCCEEEEeeCCCCEEEEEEe
Confidence 34456789999986554 4555667788888876553 2333444445678899997 45566666677888887764
Q ss_pred CCc-------eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCC
Q psy13635 148 GKK-------RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVE 220 (357)
Q Consensus 148 g~~-------~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~ 220 (357)
... ...+.. -......+++.+.+..|+ +-...+.|...++...............
T Consensus 137 ~~~~~~~~~~~~~~~~-----------------h~~~v~~~~~~~~~~~l~-t~s~D~~v~lwd~~~~~~~~~~~~h~~~ 198 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAM-----------------HTNYLSACSFTNSDMQIL-TASGDGTCALWDVESGQLLQSFHGHGAD 198 (354)
T ss_dssp CCTTCCSGGGCEEEEE-----------------CSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred ccccccccccceeeec-----------------cCCcEEEEEEeCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEcCCCCC
Confidence 321 111110 012345677776555555 5555678888887754433333333345
Q ss_pred ceEEEEeCC-CCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeE
Q psy13635 221 PRAITLSPA-HGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRR 299 (357)
Q Consensus 221 P~giavd~~-~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~ 299 (357)
...+++.|. .|.++++-... +.|...++........+...-....++++.+.+. ++++-...+.|...++......
T Consensus 199 v~~~~~~~~~~g~~l~sgs~D--g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCD--KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETT--SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEEEeCCCCCEEEEEeCC--CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEE
Confidence 677888764 24444444332 5888888776554444444445678999986554 4455556678888888665443
Q ss_pred EEecCC--CCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceee
Q psy13635 300 ELINEN--LPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTR 353 (357)
Q Consensus 300 ~i~~~~--~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i 353 (357)
...... ......+++. .+.+..+-...+.|...+..+|+....+...-.....+
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l 332 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTL 332 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE
T ss_pred EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEE
Confidence 333221 2234566665 35555555566788888876777666654443333333
No 251
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.64 E-value=0.0015 Score=59.62 Aligned_cols=237 Identities=8% Similarity=-0.047 Sum_probs=124.4
Q ss_pred EeecCCCCeEEEEEe-CCcEEEEEcCCC--CcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 34 ALSHHVAAQMLLFAT-SKDIRIANLSRP--LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
+++-++...+|+.+. ...|+..++.+. ..............++++.+.++.|..+ ..++.|+..++..........
T Consensus 16 ~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 16 EHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTC-SQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp CCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEE-ETTSSEEEC------CCCCEE
T ss_pred EEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEE-eCCCeEEEEEcCCCCceeeee
Confidence 334444555666553 456777787653 1222222345568899999876555544 455677777776542001123
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc----eEEEEecCCCCcceeeeeccCcccccCCceEEEeCC
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK----RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV 186 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~----~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~ 186 (357)
.+...-.....+++.+.++.|+.+. ..+.|...+++... ...+. .. .-.....+++.+.
T Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~-~~---------------h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 95 VLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVSKHLK-RP---------------LRSTILSLDWHPN 157 (377)
T ss_dssp ECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----CCCCEEEC-SS---------------CCSCEEEEEECTT
T ss_pred EecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccceeeeEee-cc---------------cCCCeEEEEEcCC
Confidence 3333445677888887555555444 46788887776543 22221 10 1124677888875
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCc----------------eEEEec-CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 187 ARNLYWTDTGTDRIEVCRLEGTH----------------RKVLVN-TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~~g~~----------------~~~~~~-~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
+..|. +....+.|...++.... ...+.. ........++++|.+..|+.+... +.|...+
T Consensus 158 ~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---~~i~iwd 233 (377)
T 3dwl_C 158 NVLLA-AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHD---SSVTIAY 233 (377)
T ss_dssp SSEEE-EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETT---TEEC-CE
T ss_pred CCEEE-EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCC---CcEEEEE
Confidence 54444 44445678777764111 111111 233457899999876666666544 4777777
Q ss_pred cCCCce----EEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 250 LNGGER----VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 250 ~dg~~~----~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
+..... ...+.........+++.+. +++..+-. .+.+...+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~-~~~~~~~~~~ 280 (377)
T 3dwl_C 234 PSAPEQPPRALITVKLSQLPLRSLLWANE-SAIVAAGY-NYSPILLQGN 280 (377)
T ss_dssp ECSTTSCEEECCCEECSSSCEEEEEEEET-TEEEEEES-SSSEEEECCC
T ss_pred CCCCCCcceeeEeecCCCCceEEEEEcCC-CCEEEEEc-CCcEEEEEeC
Confidence 665543 1122233344678999854 55555544 3444466655
No 252
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.62 E-value=0.04 Score=50.68 Aligned_cols=245 Identities=9% Similarity=0.057 Sum_probs=141.0
Q ss_pred CCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCC
Q psy13635 40 AAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLIT 118 (357)
Q Consensus 40 ~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 118 (357)
...+++.+. ...|+..|+.................++++++.+..|+ +-..++.|+..++.... ....+...-..
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~---~~~~~~~h~~~ 183 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI-SSSQDMQLKIWSVKDGS---NPRTLIGHRAT 183 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCC---CCEEEECCSSC
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEE-EEeCCCeEEEEeCCCCc---CceEEcCCCCc
Confidence 344455554 45688899876433333335667789999998666554 55566789999987653 13334444456
Q ss_pred ceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeecc-C-------cccccCCceEEEeCCCCeE
Q psy13635 119 PDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKL-P-------TIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 119 p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~-~-------~~~~~~p~glavD~~~~~l 190 (357)
...+++.+.++.|+ +-...+.|...++..................+..+.+ + .........+++++.+ .+
T Consensus 184 v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~ 261 (420)
T 3vl1_A 184 VTDIAIIDRGRNVL-SASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KY 261 (420)
T ss_dssp EEEEEEETTTTEEE-EEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EE
T ss_pred EEEEEEcCCCCEEE-EEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC-CE
Confidence 78999998655554 5556788998888755443333221111111110000 0 0001233445555444 44
Q ss_pred EEEeCCCCeEEEEEcCCCceE-EEecCCCCCceEEEEeCCCC-EEEEEeCCCCCCeEEEEecCCCc--eEEEeeCCCCCc
Q psy13635 191 YWTDTGTDRIEVCRLEGTHRK-VLVNTDLVEPRAITLSPAHG-YLFWSDWNEKRPKIERSLLNGGE--RVLLVKDRLGWP 266 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~g~~~~-~~~~~~~~~P~giavd~~~g-~Ly~~d~~~~~~~I~~~~~dg~~--~~~~~~~~l~~P 266 (357)
.++....+.|...++...... .+..........++++|.+. .|+..... +.|...++.... ...+....-...
T Consensus 262 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d---g~i~vwd~~~~~~~~~~~~~~~~~~v 338 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN---GMLAQWDLRSPECPVGEFLINEGTPI 338 (420)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCTTSCSEEEEESTTSCE
T ss_pred EEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC---CeEEEEEcCCCcCchhhhhccCCCCc
Confidence 455555678998888754433 33222335678999998766 55555544 588888887543 233332232334
Q ss_pred eEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 267 NGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
..+... ++.++++-...+.|...++..
T Consensus 339 ~~~~~~--~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 339 NNVYFA--AGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEEEE--TTEEEEEETTTEEEEEEEECC
T ss_pred eEEEeC--CCCEEEEecCCccEEEEeccC
Confidence 556553 566777777777887777644
No 253
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.62 E-value=0.034 Score=49.76 Aligned_cols=260 Identities=6% Similarity=-0.076 Sum_probs=139.9
Q ss_pred cCCCcEEEEEEEccC--CEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEE
Q psy13635 68 KDLEEGAAIDYYYKK--SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 68 ~~~~~~~~i~~d~~~--~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~ 145 (357)
..-.....+++++.+ +.+.++-..++.|...+++.... .....+...-.....+++.+.++.|+ +-..++.|...+
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd 114 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-TIPKAQQMHTGPVLDVCWSDDGSKVF-TASCDKTAKMWD 114 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-EEEEEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEE
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-eeEEEeccccCCEEEEEECcCCCEEE-EEcCCCcEEEEE
Confidence 455678999999876 67777777778888888875320 11234444455678999997555454 555678999999
Q ss_pred cCCCceEEEEecCCCCcceeeeeccCcccccCCceEEE--eCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceE
Q psy13635 146 LDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAV--DWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRA 223 (357)
Q Consensus 146 ~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glav--D~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~g 223 (357)
++......+.... .....+++ ++ .+.++++....+.|...++............ .....
T Consensus 115 ~~~~~~~~~~~~~-----------------~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~ 175 (368)
T 3mmy_A 115 LSSNQAIQIAQHD-----------------APVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYC 175 (368)
T ss_dssp TTTTEEEEEEECS-----------------SCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEE
T ss_pred cCCCCceeecccc-----------------CceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceE
Confidence 8876554433211 24566777 53 4455556556678888887644332222211 23333
Q ss_pred EEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-CC-CCceEEEEecCCC---EEEEEeCCCCeEEEEeCCCCC-
Q psy13635 224 ITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-RL-GWPNGITLDVDNE---KLYWCDAKTDKIEMIDFDGNN- 297 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-~l-~~P~giaid~~~~---~lY~~d~~~~~I~~~~~dG~~- 297 (357)
+... ...++.+... +.+...+++.......... .. .....+++..... ..+++-...+.|...+.+...
T Consensus 176 ~~~~--~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 176 ADVI--YPMAVVATAE---RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp EEEE--TTEEEEEEGG---GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH
T ss_pred EEec--CCeeEEEeCC---CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc
Confidence 3333 4566666554 3566666654433222111 11 1122333321111 113333345666666665432
Q ss_pred ---eEEEecCCCC------------ceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeee
Q psy13635 298 ---RRELINENLP------------HVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRR 354 (357)
Q Consensus 298 ---~~~i~~~~~~------------~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~ 354 (357)
...+.. ... ....+++. .+.+.++-...+.|...+..+++....+.........+.
T Consensus 251 ~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 322 (368)
T 3mmy_A 251 AKDNFTFKC-HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACC 322 (368)
T ss_dssp HHHSEEEEC-SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEE
T ss_pred cccceeeee-eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEE
Confidence 111111 111 35667776 344445555667888888877776665554333344443
No 254
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.011 Score=59.77 Aligned_cols=246 Identities=8% Similarity=0.032 Sum_probs=139.0
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC-CeEEEEeCCCCEEEEEEcCCC
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT-EKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~-~~ly~td~~~~~I~~~~~~g~ 149 (357)
....++++++.+..|. +...++.|...++.+... .....+...-....++++.+.. +.+.++-..++.|...++++.
T Consensus 10 ~~V~~l~~s~dg~~la-tg~~dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~ 87 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLA-TCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 87 (753)
T ss_dssp CCEEEECCCSSSCCEE-EEETTTEEEEEEEETTEE-EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT
T ss_pred ceeEEEEECCCCCeEE-EEECCCcEEEEecCCCCC-ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC
Confidence 4567788887655554 444567777777764321 1122333334456788887542 556666666788999888765
Q ss_pred ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC-CeEEEEeCCCCeEEEEEcCCC--ceEEEecCCCCCceEEEE
Q psy13635 150 KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA-RNLYWTDTGTDRIEVCRLEGT--HRKVLVNTDLVEPRAITL 226 (357)
Q Consensus 150 ~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~-~~lY~td~~~~~I~~~~~~g~--~~~~~~~~~~~~P~giav 226 (357)
....+... ...-.....+++.+.. +.++++....+.|...++... ...............+++
T Consensus 88 ~~~~~~~~--------------~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~ 153 (753)
T 3jro_A 88 RWSQIAVH--------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (753)
T ss_dssp EEEEEEEE--------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEE
T ss_pred cccccccc--------------cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEe
Confidence 42222111 0111245678887662 455555566678888887754 222223334456788899
Q ss_pred eCC-------------CCEEEEEeCCCCCCeEEEEecCCCce--E--EEeeCCCCCceEEEEecCC--CEEEEEeCCCCe
Q psy13635 227 SPA-------------HGYLFWSDWNEKRPKIERSLLNGGER--V--LLVKDRLGWPNGITLDVDN--EKLYWCDAKTDK 287 (357)
Q Consensus 227 d~~-------------~g~Ly~~d~~~~~~~I~~~~~dg~~~--~--~~~~~~l~~P~giaid~~~--~~lY~~d~~~~~ 287 (357)
+|. ...++.+... +.|...++..... . ......-....++++.+.. +.+.++-...+.
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~sgs~d---g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVTGGAD---NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp CCCC---------CGGGCCEEEEETT---SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC
T ss_pred cCcccccccccccCCCCCEEEEEECC---CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE
Confidence 884 3344444433 4666666654322 1 1222233456889998653 666666666778
Q ss_pred EEEEeCCCCCe---EEEec--CCCCceEEEEEE-CCEEEEEeCCCCeEEEEeCc
Q psy13635 288 IEMIDFDGNNR---RELIN--ENLPHVFGISLL-GDYVYWTDWQRRSIDRVNKI 335 (357)
Q Consensus 288 I~~~~~dG~~~---~~i~~--~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~ 335 (357)
|...+...... ..+.. .......++++. ++..+++-...+.|+..+..
T Consensus 231 I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 231 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 88888755321 11111 122234567776 45555665667788777754
No 255
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.57 E-value=0.05 Score=50.46 Aligned_cols=265 Identities=9% Similarity=0.054 Sum_probs=141.9
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCc------ce--eEEEEeCCc------------CCceeEEEEcCC
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNV------GS--KHNVITNGL------------ITPDGLAIDWLT 128 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~------~~--~~~~~~~~~------------~~p~glavd~~~ 128 (357)
......+++|++.+..|... ..++.|...++..... .+ ....+...- .....+++.+.+
T Consensus 27 ~~~~V~~v~~s~~g~~la~g-~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATG-DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEE-ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECCCCCEEEEE-cCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 44578899999866655544 4567787777765420 00 122222222 457788998755
Q ss_pred C-eEEEEeCCCCEEEEEEcCCCceEEEEecCCC---------------C----cceeee-----eccCcccccCCceEEE
Q psy13635 129 E-KLYWTDSETNKLEVSSLDGKKRKVLYWEDID---------------Q----PRAIAS-----YKLPTIEVEHPDGVAV 183 (357)
Q Consensus 129 ~-~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~---------------~----p~~i~~-----~~~~~~~~~~p~glav 183 (357)
+ ..+.+-...+.|...++.............. - |....+ ..+....-.....+++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 2 4555556678888877654222100000000 0 000000 0000112235678899
Q ss_pred eCCCCeEEEEeCCCCeEEEEEcC-CCceEE-E------ecCCCCCceEEEEeCCC-CEEEEEeCCCCCCeEEEEecCCCc
Q psy13635 184 DWVARNLYWTDTGTDRIEVCRLE-GTHRKV-L------VNTDLVEPRAITLSPAH-GYLFWSDWNEKRPKIERSLLNGGE 254 (357)
Q Consensus 184 D~~~~~lY~td~~~~~I~~~~~~-g~~~~~-~------~~~~~~~P~giavd~~~-g~Ly~~d~~~~~~~I~~~~~dg~~ 254 (357)
.+.+. ++++. ..+.|...++. +..... + ..........++++|.+ ..|+.+... +.|...++....
T Consensus 186 ~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~ 260 (447)
T 3dw8_B 186 NSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK---GTIRLCDMRASA 260 (447)
T ss_dssp CTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT---SCEEEEETTTCS
T ss_pred cCCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC---CeEEEEECcCCc
Confidence 87554 44454 57789998887 332222 1 11233457899999875 455555444 578888876554
Q ss_pred e----EEEeeCCCC------------CceEEEEecCCCEEEEEeCCCCeEEEEeCCC--CCeEEEecCC-CC--------
Q psy13635 255 R----VLLVKDRLG------------WPNGITLDVDNEKLYWCDAKTDKIEMIDFDG--NNRRELINEN-LP-------- 307 (357)
Q Consensus 255 ~----~~~~~~~l~------------~P~giaid~~~~~lY~~d~~~~~I~~~~~dG--~~~~~i~~~~-~~-------- 307 (357)
. ...+..... ....+++++.+..|..+.. +.|...+... .....+.... ..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 261 LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred cccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeecccccccccccccc
Confidence 3 233322222 5689999876555655544 8898888853 3332222110 00
Q ss_pred -----ceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeE
Q psy13635 308 -----HVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDRE 341 (357)
Q Consensus 308 -----~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~ 341 (357)
....+++. ++...++-...+.|+..+..+++...
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred ccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 02236665 34444666677888888886666654
No 256
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.014 Score=59.14 Aligned_cols=240 Identities=9% Similarity=-0.030 Sum_probs=134.7
Q ss_pred ecCCCCeEEEEEe-CCcEEEEEcCCC--CcceEeccCCCcEEEEEEEccC-CEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 36 SHHVAAQMLLFAT-SKDIRIANLSRP--LKPVTIIKDLEEGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 36 ~~~~~~~~l~~~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~i~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
+-++...+++.+. ...|+..++.+. ..............++++.+.. +....+-..++.|+..++++... .....
T Consensus 16 ~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~-~~~~~ 94 (753)
T 3jro_A 16 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW-SQIAV 94 (753)
T ss_dssp CCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE-EEEEE
T ss_pred EECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc-ccccc
Confidence 3344445555554 456888887642 1122223345567899998752 44555555677888888876520 11223
Q ss_pred EeCCcCCceeEEEEcCC-CeEEEEeCCCCEEEEEEcCCCce--EEEEecCCCCcceeeeeccCcccccCCceEEEeCC--
Q psy13635 112 ITNGLITPDGLAIDWLT-EKLYWTDSETNKLEVSSLDGKKR--KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV-- 186 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~-~~ly~td~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~-- 186 (357)
..........+++.+.. +.++++-..++.|...++..... ....... ......+++++.
T Consensus 95 ~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~----------------~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 95 HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATI 158 (753)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC----------------SSCEEEEEECCCC-
T ss_pred ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC----------------CCceEEEEecCccc
Confidence 33344567889998762 55666666788999999876521 1111111 123455666653
Q ss_pred ----------CCeEEEEeCCCCeEEEEEcCCCc----eEEEecCCCCCceEEEEeCCC--CEEEEEeCCCCCCeEEEEec
Q psy13635 187 ----------ARNLYWTDTGTDRIEVCRLEGTH----RKVLVNTDLVEPRAITLSPAH--GYLFWSDWNEKRPKIERSLL 250 (357)
Q Consensus 187 ----------~~~lY~td~~~~~I~~~~~~g~~----~~~~~~~~~~~P~giavd~~~--g~Ly~~d~~~~~~~I~~~~~ 250 (357)
++.++++....+.|...+..... .............+++++|.. +.+..+-... +.|...++
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D--g~I~iwd~ 236 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD--RTCIIWTQ 236 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS--SCEEEEEE
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC--CEEEEecC
Confidence 34555566666778888776432 111222234567899999873 4544444432 46777776
Q ss_pred CCCceE---EEee--CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 251 NGGERV---LLVK--DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 251 dg~~~~---~~~~--~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
...... .+.. ..-....++++++.+.. +++-...+.|...+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~-l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC-EEEECSSSCEECCBCCS
T ss_pred CCCCCcceeEEeccCCCCCceEEEEEcCCCCE-EEEEcCCCEEEEEecCC
Confidence 653211 1111 12234568899865444 44545567788877763
No 257
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.50 E-value=0.051 Score=48.88 Aligned_cols=272 Identities=7% Similarity=-0.005 Sum_probs=148.1
Q ss_pred CCeEEEEEe-CCcEEEEEcCCCCc-------ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 40 AAQMLLFAT-SKDIRIANLSRPLK-------PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 40 ~~~~l~~~~-~~~i~~~~~~~~~~-------~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
..++|+-+. ...|+..|+..... ...+.........+++++.+.. ..+...++.|+..++.... ....
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~-l~s~s~D~~v~lwd~~~~~---~~~~ 113 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF-AISSSWDKTLRLWDLRTGT---TYKR 113 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE-EEEEETTSEEEEEETTSSC---EEEE
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE-EEEEcCCCcEEEEECCCCc---EEEE
Confidence 344555444 45688888764211 1122334456788999885554 4565667888888887653 2333
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC----
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA---- 187 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~---- 187 (357)
+...-.....+++.+.++.|+ +-...+.|...++.+....... ... ........+++.+..
T Consensus 114 ~~~h~~~v~~v~~sp~~~~l~-s~~~d~~i~~wd~~~~~~~~~~-~~~-------------~~~~~v~~~~~~~~~~~~~ 178 (343)
T 2xzm_R 114 FVGHQSEVYSVAFSPDNRQIL-SAGAEREIKLWNILGECKFSSA-EKE-------------NHSDWVSCVRYSPIMKSAN 178 (343)
T ss_dssp EECCCSCEEEEEECSSTTEEE-EEETTSCEEEEESSSCEEEECC-TTT-------------SCSSCEEEEEECCCCCSCS
T ss_pred EcCCCCcEEEEEECCCCCEEE-EEcCCCEEEEEeccCCceeeee-ccc-------------CCCceeeeeeecccccccc
Confidence 333445678899997655554 5556788998888754322111 000 001123344554433
Q ss_pred -----CeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC-CCceEEEeeC
Q psy13635 188 -----RNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-GGERVLLVKD 261 (357)
Q Consensus 188 -----~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-g~~~~~~~~~ 261 (357)
+.++.+-...+.|...+..+.....+. ........++++|.+..|..+... +.|...++. ..........
T Consensus 179 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~d---g~v~iwd~~~~~~~~~~~~~ 254 (343)
T 2xzm_R 179 KVQPFAPYFASVGWDGRLKVWNTNFQIRYTFK-AHESNVNHLSISPNGKYIATGGKD---KKLLIWDILNLTYPQREFDA 254 (343)
T ss_dssp CCCSSCCEEEEEETTSEEEEEETTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEETT---CEEEEEESSCCSSCSEEEEC
T ss_pred ccCCCCCEEEEEcCCCEEEEEcCCCceeEEEc-CccccceEEEECCCCCEEEEEcCC---CeEEEEECCCCcccceeecC
Confidence 134555555678888886554443332 234567899999875555554443 577777773 2222222212
Q ss_pred CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCe-E--EEec----------CCCCceEEEEEE-CCEEEEEeCCCC
Q psy13635 262 RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNR-R--ELIN----------ENLPHVFGISLL-GDYVYWTDWQRR 327 (357)
Q Consensus 262 ~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~-~--~i~~----------~~~~~p~gia~~-~~~ly~td~~~~ 327 (357)
-.....+++++....|..+. .+.|...+...... . .+.. ........+++. .+....+-...+
T Consensus 255 -~~~v~~v~~sp~~~~la~~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg 331 (343)
T 2xzm_R 255 -GSTINQIAFNPKLQWVAVGT--DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDG 331 (343)
T ss_dssp -SSCEEEEEECSSSCEEEEEE--SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTS
T ss_pred -CCcEEEEEECCCCCEEEEEC--CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCc
Confidence 23467899986655444333 44577777644322 1 1110 111234567776 344444444567
Q ss_pred eEEEEeCccC
Q psy13635 328 SIDRVNKITG 337 (357)
Q Consensus 328 ~I~~~~~~~g 337 (357)
.|...+..+|
T Consensus 332 ~v~~w~~~~g 341 (343)
T 2xzm_R 332 VIRTFSFETS 341 (343)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEEcc
Confidence 7776665444
No 258
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.49 E-value=0.067 Score=50.05 Aligned_cols=258 Identities=10% Similarity=0.047 Sum_probs=148.9
Q ss_pred EEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEc-cCCEEEEEeCCCCeEEEEEcCCCCccee------------
Q psy13635 43 MLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYY-KKSMVCWTDHGTEMISCCTFDGNNVGSK------------ 108 (357)
Q Consensus 43 ~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~~------------ 108 (357)
.++.+. +..|+..|+..+..............++++.+ .++....+...++.|...++........
T Consensus 175 ~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 254 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH 254 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEES
T ss_pred EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee
Confidence 343333 55788999876444444444566778888886 3556777777778888888775531100
Q ss_pred --------EEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCce
Q psy13635 109 --------HNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDG 180 (357)
Q Consensus 109 --------~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~g 180 (357)
............. +.+.++.+ ++-..++.|...++........... .-.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l-~~~~~d~~i~vwd~~~~~~~~~~~~----------------~~~~v~~ 315 (464)
T 3v7d_B 255 TPEENPYFVGVLRGHMASVRT--VSGHGNIV-VSGSYDNTLIVWDVAQMKCLYILSG----------------HTDRIYS 315 (464)
T ss_dssp CGGGCTTEEEEECCCSSCEEE--EEEETTEE-EEEETTSCEEEEETTTTEEEEEECC----------------CSSCEEE
T ss_pred ccCCCeEEEEEccCccceEEE--EcCCCCEE-EEEeCCCeEEEEECCCCcEEEEecC----------------CCCCEEE
Confidence 1111112222333 34334444 4444567888888865443322211 1124667
Q ss_pred EEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee
Q psy13635 181 VAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK 260 (357)
Q Consensus 181 lavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~ 260 (357)
+++++.+..|+ +....+.|...++..................++++ ...|..+... +.|...++..........
T Consensus 316 ~~~~~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d---g~v~vwd~~~~~~~~~~~ 389 (464)
T 3v7d_B 316 TIYDHERKRCI-SASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD---GSIRGWDANDYSRKFSYH 389 (464)
T ss_dssp EEEETTTTEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT---SEEEEEETTTCCEEEEEE
T ss_pred EEEcCCCCEEE-EEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC---CcEEEEECCCCceeeeec
Confidence 88887665555 54556789999986544433333344566778887 3566555544 578888887655444332
Q ss_pred CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeE-EEecCCCCceEEEEEECCEEEEEeCCCCe
Q psy13635 261 DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRR-ELINENLPHVFGISLLGDYVYWTDWQRRS 328 (357)
Q Consensus 261 ~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~-~i~~~~~~~p~gia~~~~~ly~td~~~~~ 328 (357)
.-.....+++.+.+..|..+. .+.|...+....... ............++++++.++.+-...+.
T Consensus 390 -~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~ 455 (464)
T 3v7d_B 390 -HTNLSAITTFYVSDNILVSGS--ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQ 455 (464)
T ss_dssp -CTTCCCEEEEEECSSEEEEEE--TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTE
T ss_pred -CCCCccEEEEEeCCCEEEEec--CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCe
Confidence 223445667775555555444 678999987654332 22233344567788888888777655444
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.47 E-value=0.082 Score=53.48 Aligned_cols=231 Identities=6% Similarity=0.042 Sum_probs=132.0
Q ss_pred cCCEEEEEeCCCC----eEEEEEc---CCC--CcceeEEEEeC-------CcCCceeEEEE-cCCCeEEEEeCCC----C
Q psy13635 81 KKSMVCWTDHGTE----MISCCTF---DGN--NVGSKHNVITN-------GLITPDGLAID-WLTEKLYWTDSET----N 139 (357)
Q Consensus 81 ~~~~ly~~d~~~~----~I~~~~~---~g~--~~~~~~~~~~~-------~~~~p~glavd-~~~~~ly~td~~~----~ 139 (357)
.++++||+....+ .++|... +|. . .+.++.. +.....+.++. +.++.|.|+.... .
T Consensus 125 ~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~---~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~ 201 (751)
T 2xe4_A 125 YGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAA---EEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVY 201 (751)
T ss_dssp ETTEEEEEEECTTCCSCEEEEEETTSCTTCTTT---CEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCE
T ss_pred ECCEEEEEEECCCCceeEEEEEcCCCCCCCCcC---CEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceE
Confidence 4789999865443 3777776 453 3 1333322 11134567888 8788776665332 2
Q ss_pred EEEEEEcCCC-ceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC----CeEEEEEcCCCce--EE
Q psy13635 140 KLEVSSLDGK-KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT----DRIEVCRLEGTHR--KV 212 (357)
Q Consensus 140 ~I~~~~~~g~-~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~----~~I~~~~~~g~~~--~~ 212 (357)
+|++.++++. .. + ... + . ....+++..+.++.||++.... ..|++.++++... ..
T Consensus 202 ~l~v~dl~~g~~~--l-~~~------~------~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~l 263 (751)
T 2xe4_A 202 TIEFKRISDPSQT--I-ADK------V------S---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVC 263 (751)
T ss_dssp EEEEEETTCTTCC--C-CCC------E------E---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEE
T ss_pred EEEEEECCCCCEe--C-Ccc------c------c---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEE
Confidence 5999998876 41 0 000 0 0 0124566666677777765421 3688899886532 23
Q ss_pred EecC-CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCc--e--EEEeeCCCCCc-eEEEEecCCCEEEEEeC---
Q psy13635 213 LVNT-DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGE--R--VLLVKDRLGWP-NGITLDVDNEKLYWCDA--- 283 (357)
Q Consensus 213 ~~~~-~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~--~--~~~~~~~l~~P-~giaid~~~~~lY~~d~--- 283 (357)
+... .-..-.++.++|.+..|+++........|+.+++++.. . +.+.... ..+ ..+.. ..++.||+...
T Consensus 264 v~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~s~~~-~~g~~l~~~t~~~~ 341 (751)
T 2xe4_A 264 LYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE-KGVRYDVQM-HGTSHLVILTNEGG 341 (751)
T ss_dssp EEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC-TTCCEEEEE-ETTTEEEEEECTTT
T ss_pred EEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC-CCceEEEee-eeCCEEEEEeCCCC
Confidence 3222 11233567889988888888754334689999998652 2 3333222 222 22221 35788877643
Q ss_pred -CCCeEEEEeCCC-CCeEE-EecCCCC-ceEEEEEECCEEEEEeCCCC--eEEEEeC
Q psy13635 284 -KTDKIEMIDFDG-NNRRE-LINENLP-HVFGISLLGDYVYWTDWQRR--SIDRVNK 334 (357)
Q Consensus 284 -~~~~I~~~~~dG-~~~~~-i~~~~~~-~p~gia~~~~~ly~td~~~~--~I~~~~~ 334 (357)
.+.+|++++.++ ...+. ++..... ...+++.++++|+++....+ .|+.++.
T Consensus 342 a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 342 AVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp CTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred CCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 346899999874 33333 4443322 34567777888888765544 4667774
No 260
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.46 E-value=0.052 Score=48.10 Aligned_cols=264 Identities=10% Similarity=0.023 Sum_probs=147.0
Q ss_pred CCcEEEEEcCCCCc-ceE----eccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEE
Q psy13635 49 SKDIRIANLSRPLK-PVT----IIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLA 123 (357)
Q Consensus 49 ~~~i~~~~~~~~~~-~~~----~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~gla 123 (357)
+..|+..|+..... ... .......+.++++.+.+..|+ +-..++.|...+..... ................
T Consensus 60 D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~-s~~~d~~i~~~~~~~~~---~~~~~~~~~~~~~~~~ 135 (340)
T 4aow_A 60 DKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTGT---TTRRFVGHTKDVLSVA 135 (340)
T ss_dssp TSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE---EEEEEECCSSCEEEEE
T ss_pred CCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEE-EEcccccceEEeecccc---eeeeecCCCCceeEEE
Confidence 45688888765321 111 222345688999998665555 44456778877777663 2333334444556666
Q ss_pred EEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC-CeEEEEeCCCCeEEE
Q psy13635 124 IDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA-RNLYWTDTGTDRIEV 202 (357)
Q Consensus 124 vd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~-~~lY~td~~~~~I~~ 202 (357)
+.+.+..| ++-...+.+...+..+.........+ .-.....+++.+.. +.++++....+.|..
T Consensus 136 ~~~~~~~l-~s~s~d~~~~~~d~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i 199 (340)
T 4aow_A 136 FSSDNRQI-VSGSRDKTIKLWNTLGVCKYTVQDES---------------HSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199 (340)
T ss_dssp ECTTSSCE-EEEETTSCEEEECTTSCEEEEECSSS---------------CSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred EeecCccc-eeecCCCeEEEEEeCCCceEEEEecc---------------ccCcccceEEccCCCCcEEEEEcCCCEEEE
Confidence 66544444 44445677777777655443332111 11123445554333 345556555667888
Q ss_pred EEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEe
Q psy13635 203 CRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCD 282 (357)
Q Consensus 203 ~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d 282 (357)
.+...................++++|....|+.+... +.|...++........... -.....+++.+ ++.+..+
T Consensus 200 ~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---g~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~-~~~~~~~- 273 (340)
T 4aow_A 200 WNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD---GQAMLWDLNEGKHLYTLDG-GDIINALCFSP-NRYWLCA- 273 (340)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---CEEEEEETTTTEEEEEEEC-SSCEEEEEECS-SSSEEEE-
T ss_pred EECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC---CeEEEEEeccCceeeeecC-CceEEeeecCC-CCceeec-
Confidence 8887655544444344567899999875555555443 5788888776554444332 23456777764 4444333
Q ss_pred CCCCeEEEEeCCCCCeEEEecC---------CCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccCc
Q psy13635 283 AKTDKIEMIDFDGNNRRELINE---------NLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 283 ~~~~~I~~~~~dG~~~~~i~~~---------~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~ 338 (357)
...+.|...+.++......... .......+++. ++...++-...+.|+.-+..+|+
T Consensus 274 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 274 ATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred cCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 3456788888776543222211 12234567775 34445555556777766665664
No 261
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.44 E-value=0.075 Score=49.50 Aligned_cols=230 Identities=9% Similarity=0.008 Sum_probs=131.1
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCce
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKR 151 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~ 151 (357)
....++++ +..+++...++.|...++.... ....+...-.....+++ .+.+.++-..++.|...++.....
T Consensus 135 ~v~~~~~d---~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 135 GVYCLQYD---DQKIVSGLRDNTIKIWDKNTLE---CKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CEEEEECC---SSEEEEEESSSCEEEEESSSCC---EEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cEEEEEEC---CCEEEEEeCCCeEEEEeCCCCe---EEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcE
Confidence 35555553 4444555566788888887653 23333333334555555 345666666778999999875543
Q ss_pred EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceE---EEecCCCCCceEEEEeC
Q psy13635 152 KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRK---VLVNTDLVEPRAITLSP 228 (357)
Q Consensus 152 ~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~---~~~~~~~~~P~giavd~ 228 (357)
....... ......++++ ++ .+++....+.|...+....... ............++++
T Consensus 206 ~~~~~~h----------------~~~v~~l~~~--~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~- 265 (435)
T 1p22_A 206 LNTLIHH----------------CEAVLHLRFN--NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD- 265 (435)
T ss_dssp EEEECCC----------------CSCEEEEECC--TT-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE-
T ss_pred EEEEcCC----------------CCcEEEEEEc--CC-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC-
Confidence 3222111 1123344443 34 4445555678888887754322 2222333456677775
Q ss_pred CCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCc
Q psy13635 229 AHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINENLPH 308 (357)
Q Consensus 229 ~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~ 308 (357)
...|+.+... +.|...++........+.........++++ ++.+ ++-...+.|...+.........+......
T Consensus 266 -~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~h~~~ 338 (435)
T 1p22_A 266 -DKYIVSASGD---RTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLV-VSGSSDNTIRLWDIECGACLRVLEGHEEL 338 (435)
T ss_dssp -TTEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEE-EEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred -CCEEEEEeCC---CeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEE-EEEeCCCeEEEEECCCCCEEEEEeCCcCc
Confidence 4566666554 588888887655554444444455677764 4444 44445678999998754443344434445
Q ss_pred eEEEEEECCEEEEEeCCCCeEEEEeCccCc
Q psy13635 309 VFGISLLGDYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 309 p~gia~~~~~ly~td~~~~~I~~~~~~~g~ 338 (357)
...+++++..+.... ..+.|...+..+++
T Consensus 339 v~~~~~~~~~l~sg~-~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 339 VRCIRFDNKRIVSGA-YDGKIKVWDLVAAL 367 (435)
T ss_dssp EEEEECCSSEEEEEE-TTSCEEEEEHHHHT
T ss_pred EEEEEecCCEEEEEe-CCCcEEEEECCCCC
Confidence 667777555555544 55788877764444
No 262
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.31 E-value=0.0058 Score=55.62 Aligned_cols=239 Identities=10% Similarity=0.005 Sum_probs=123.0
Q ss_pred cEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc-
Q psy13635 72 EGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK- 150 (357)
Q Consensus 72 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~- 150 (357)
...++++++.+..| .+-..++.|...++++... .....+...-.....+++.+.++.|+ +-..++.|...++....
T Consensus 13 ~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 13 PSYEHAFNSQRTEF-VTTTATNQVELYEQDGNGW-KHARTFSDHDKIVTCVDWAPKSNRIV-TCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CCSCCEECSSSSEE-ECCCSSSCBCEEEEETTEE-EECCCBCCCSSCEEEEEECTTTCCEE-EEETTSSEEEC------C
T ss_pred cEEEEEECCCCCEE-EEecCCCEEEEEEccCCce-EEEEEEecCCceEEEEEEeCCCCEEE-EEeCCCeEEEEEcCCCCc
Confidence 45567788755544 4444556676666665410 01112222334578899987655554 44456788888776543
Q ss_pred -eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCc----eEEEecCCCCCceEEE
Q psy13635 151 -RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTH----RKVLVNTDLVEPRAIT 225 (357)
Q Consensus 151 -~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~----~~~~~~~~~~~P~gia 225 (357)
....... ..-.....+++.+.+..|+.+. ..+.|...+++... ...+..........++
T Consensus 90 ~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 90 WKQTLVLL---------------RLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp CCCEEECC---------------CCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred eeeeeEec---------------ccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence 1111111 1112456777776555555444 45678887776543 3333321445688999
Q ss_pred EeCCCCEEEEEeCCCCCCeEEEEecCCCc---------------eEEEee--CCCCCceEEEEecCCCEEEEEeCCCCeE
Q psy13635 226 LSPAHGYLFWSDWNEKRPKIERSLLNGGE---------------RVLLVK--DRLGWPNGITLDVDNEKLYWCDAKTDKI 288 (357)
Q Consensus 226 vd~~~g~Ly~~d~~~~~~~I~~~~~dg~~---------------~~~~~~--~~l~~P~giaid~~~~~lY~~d~~~~~I 288 (357)
++|....|..+... +.|...++.... ...... ........+++++.+..|+.+. ..+.|
T Consensus 154 ~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i 229 (377)
T 3dwl_C 154 WHPNNVLLAAGCAD---RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG-HDSSV 229 (377)
T ss_dssp ECTTSSEEEEEESS---SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE-TTTEE
T ss_pred EcCCCCEEEEEeCC---CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe-CCCcE
Confidence 99976666665554 356655553110 111111 2233467899986655555544 56788
Q ss_pred EEEeCCCCCe----EEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 289 EMIDFDGNNR----RELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 289 ~~~~~dG~~~----~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
...+...... ...+.........+++. ++.+..+.... .+..++.
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~-~~~~~~~ 279 (377)
T 3dwl_C 230 TIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNY-SPILLQG 279 (377)
T ss_dssp C-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSS-SEEEECC
T ss_pred EEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCC-cEEEEEe
Confidence 8887755433 11122233345677776 56666665443 4445544
No 263
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.27 E-value=0.086 Score=46.37 Aligned_cols=209 Identities=9% Similarity=-0.028 Sum_probs=107.3
Q ss_pred ecCCCCeEEEEEeC-CcEEEEEcCCCCcc-eE---eccCCCcEEEEEEEcc-CCEEEEEeCCCCeEEEEEcCCCCcc---
Q psy13635 36 SHHVAAQMLLFATS-KDIRIANLSRPLKP-VT---IIKDLEEGAAIDYYYK-KSMVCWTDHGTEMISCCTFDGNNVG--- 106 (357)
Q Consensus 36 ~~~~~~~~l~~~~~-~~i~~~~~~~~~~~-~~---~~~~~~~~~~i~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~--- 106 (357)
.-++...+|+.+.. ..|+..++...... .. .........++++.+. ++.++.+-..++.|...+++.....
T Consensus 18 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~ 97 (351)
T 3f3f_A 18 VYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSG 97 (351)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSS
T ss_pred EEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccc
Confidence 33445556666654 56888888753221 12 2245567889999885 3555555556677888887654210
Q ss_pred ---eeEEEEeCCcCCceeEEEEcCC-CeEEEEeCCCCEEEEEEcCCCce-EEEEecCCCCcceeeeec-cCcccccCCce
Q psy13635 107 ---SKHNVITNGLITPDGLAIDWLT-EKLYWTDSETNKLEVSSLDGKKR-KVLYWEDIDQPRAIASYK-LPTIEVEHPDG 180 (357)
Q Consensus 107 ---~~~~~~~~~~~~p~glavd~~~-~~ly~td~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~i~~~~-~~~~~~~~p~g 180 (357)
.....+...-....++++.+.. +.++++-..++.|...++..... ..+... ..+..+. .+.........
T Consensus 98 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 172 (351)
T 3f3f_A 98 RRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLT-----SEMKVLSIPPANHLQSDFC 172 (351)
T ss_dssp CSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEE-----EEEESCSCCCSSCSCCCEE
T ss_pred cCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccc-----ccccccccccCCcccceeE
Confidence 1122333344567889998752 45555555678899988754321 110000 0000000 01122335567
Q ss_pred EEEeCC--CCeEEEEeCCCCeEEEEEcCCCceEEE--ecCCCCCceEEEEeCCCC---EEEEEeCCCCCCeEEEEecC
Q psy13635 181 VAVDWV--ARNLYWTDTGTDRIEVCRLEGTHRKVL--VNTDLVEPRAITLSPAHG---YLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 181 lavD~~--~~~lY~td~~~~~I~~~~~~g~~~~~~--~~~~~~~P~giavd~~~g---~Ly~~d~~~~~~~I~~~~~d 251 (357)
+++.+. .+.++.+....+.+............+ ..........++++|..+ .++.+-... +.|...++.
T Consensus 173 ~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d--g~i~iwd~~ 248 (351)
T 3f3f_A 173 LSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD--GRIRIFKIT 248 (351)
T ss_dssp EEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT--SCEEEEEEE
T ss_pred EEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC--CeEEEEeCC
Confidence 777765 233444444444454443333332212 222334578999998752 444444432 456555554
No 264
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.25 E-value=0.12 Score=47.75 Aligned_cols=250 Identities=10% Similarity=0.071 Sum_probs=133.9
Q ss_pred EeecCCCCeEEEEEe-CCcEEEEEcCCCCc-----------ceEeccCC------------CcEEEEEEEccCC-EEEEE
Q psy13635 34 ALSHHVAAQMLLFAT-SKDIRIANLSRPLK-----------PVTIIKDL------------EEGAAIDYYYKKS-MVCWT 88 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~-----------~~~~~~~~------------~~~~~i~~d~~~~-~ly~~ 88 (357)
|+.-++...+|+.+. ...|+..++..... ........ ....++++.+.++ ..+.+
T Consensus 33 ~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s 112 (447)
T 3dw8_B 33 TVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLL 112 (447)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEE
Confidence 333444555666665 45688888875331 11222222 4577899998762 34444
Q ss_pred eCCCCeEEEEEcCCCCcc------------------------------------eeEEEE-eCCcCCceeEEEEcCCCeE
Q psy13635 89 DHGTEMISCCTFDGNNVG------------------------------------SKHNVI-TNGLITPDGLAIDWLTEKL 131 (357)
Q Consensus 89 d~~~~~I~~~~~~g~~~~------------------------------------~~~~~~-~~~~~~p~glavd~~~~~l 131 (357)
...++.|+..++...... ...... ...-.....+++.+.+ ++
T Consensus 113 ~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~ 191 (447)
T 3dw8_B 113 STNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDY-ET 191 (447)
T ss_dssp EECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTS-SE
T ss_pred eCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCC-CE
Confidence 455666666665432100 000011 2233457889999754 45
Q ss_pred EEEeCCCCEEEEEEcCC-CceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCce
Q psy13635 132 YWTDSETNKLEVSSLDG-KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHR 210 (357)
Q Consensus 132 y~td~~~~~I~~~~~~g-~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~ 210 (357)
+.+. ..+.|...++.. .....+.... |..+ ...-.....+++++.+..++++....+.|...++.....
T Consensus 192 l~s~-~d~~i~iwd~~~~~~~~~~~~~~---~~~~------~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 192 YLSA-DDLRINLWHLEITDRSFNIVDIK---PANM------EELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEEE-CSSEEEEEETTEEEEEEEEEECC---CSSG------GGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEEe-CCCeEEEEECCCCCceeeeeecc---cccc------cccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 5555 689999999873 2222211100 0000 111124678888877645666666677899998775442
Q ss_pred ----EEEecCCCC------------CceEEEEeCCCCEEEEEeCCCCCCeEEEEecC--CCceEEEeeCC-CC-------
Q psy13635 211 ----KVLVNTDLV------------EPRAITLSPAHGYLFWSDWNEKRPKIERSLLN--GGERVLLVKDR-LG------- 264 (357)
Q Consensus 211 ----~~~~~~~~~------------~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d--g~~~~~~~~~~-l~------- 264 (357)
......... ....++++|.+..|..+.. +.|...++. +.....+.... ..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY----LSVKVWDLNMENRPVETYQVHEYLRSKLCSLY 337 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES----SEEEEEETTCCSSCSCCEESCGGGTTTHHHHH
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC----CeEEEEeCCCCccccceeeccccccccccccc
Confidence 222222222 6789999997556665544 267667665 33222222111 00
Q ss_pred ------CceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeE
Q psy13635 265 ------WPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRR 299 (357)
Q Consensus 265 ------~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~ 299 (357)
....+++++.+..| ++-...+.|...+.......
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTCCEE
T ss_pred cccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCCcce
Confidence 02237887655555 56666788888888765543
No 265
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.20 E-value=0.13 Score=46.87 Aligned_cols=267 Identities=11% Similarity=0.078 Sum_probs=140.6
Q ss_pred EEEEEeC-CcEEEEEcCCCCc-ceEeccC---------CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 43 MLLFATS-KDIRIANLSRPLK-PVTIIKD---------LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 43 ~l~~~~~-~~i~~~~~~~~~~-~~~~~~~---------~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
.++++.. ..|..+|...+.. ....... ......+.+ .++.||+... ++.|+.++..... .....
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~-~g~l~a~d~~tG~--~~W~~ 129 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSE-KAQVYALNTSDGT--VAWQT 129 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEET-TSEEEEEETTTCC--EEEEE
T ss_pred EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcC-CCEEEEEECCCCC--EEEEE
Confidence 4555553 4677888754221 1222211 111223333 3789998764 4689999986442 11222
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc-CCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeE
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL-DGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNL 190 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~-~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~l 190 (357)
-..+ ......+++ ++.+|+.. ..+.|..++. +|+..-...... + ..........+++ ++.+
T Consensus 130 ~~~~-~~~~~p~~~--~~~v~v~~-~~g~l~~~d~~tG~~~W~~~~~~---~---------~~~~~~~~~~~~~--~~~v 191 (376)
T 3q7m_A 130 KVAG-EALSRPVVS--DGLVLIHT-SNGQLQALNEADGAVKWTVNLDM---P---------SLSLRGESAPTTA--FGAA 191 (376)
T ss_dssp ECSS-CCCSCCEEE--TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC-----------------CCCCCCEEE--TTEE
T ss_pred eCCC-ceEcCCEEE--CCEEEEEc-CCCeEEEEECCCCcEEEEEeCCC---C---------ceeecCCCCcEEE--CCEE
Confidence 2211 111223444 67777755 4678998887 454432221110 0 0000011223344 5677
Q ss_pred EEEeCCCCeEEEEEcC-CCceEEEecCCC------C----CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe
Q psy13635 191 YWTDTGTDRIEVCRLE-GTHRKVLVNTDL------V----EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV 259 (357)
Q Consensus 191 Y~td~~~~~I~~~~~~-g~~~~~~~~~~~------~----~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~ 259 (357)
|+.. ..+.+..+++. |+..-....... . .....+++ ++.+|+.... +.+...+....... .
T Consensus 192 ~~g~-~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~~~---g~l~~~d~~tG~~~--w 263 (376)
T 3q7m_A 192 VVGG-DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--NGVVFALAYN---GNLTALDLRSGQIM--W 263 (376)
T ss_dssp EECC-TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE--TTEEEEECTT---SCEEEEETTTCCEE--E
T ss_pred EEEc-CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--CCEEEEEecC---cEEEEEECCCCcEE--e
Confidence 7643 34578888864 544322221100 0 00111233 5889988754 58888887533322 2
Q ss_pred eCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec-CCCCceEEEEEECCEEEEEeCCCCeEEEEeCccCc
Q psy13635 260 KDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN-ENLPHVFGISLLGDYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 260 ~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~-~~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~ 338 (357)
......+.+++++ +++||++.. .+.+..++.......-... ..........+.++.||+.+. .+.|+.++..+|+
T Consensus 264 ~~~~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~-~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 264 KRELGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDS-EGYLHWINVEDGR 339 (376)
T ss_dssp EECCCCEEEEEEE--TTEEEEEET-TCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECT-TSEEEEEETTTCC
T ss_pred eccCCCCCCceEE--CCEEEEEcC-CCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeC-CCeEEEEECCCCc
Confidence 2223456677774 889999885 4689999975433322222 111223345567899999875 4789999988888
Q ss_pred eeEEEe
Q psy13635 339 DREVII 344 (357)
Q Consensus 339 ~~~~i~ 344 (357)
......
T Consensus 340 ~~~~~~ 345 (376)
T 3q7m_A 340 FVAQQK 345 (376)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 765543
No 266
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.19 E-value=0.12 Score=46.50 Aligned_cols=283 Identities=11% Similarity=-0.029 Sum_probs=147.8
Q ss_pred cCCCCeEEEEEe-CCcEEEEEcCCCCcc-eE-e-ccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE
Q psy13635 37 HHVAAQMLLFAT-SKDIRIANLSRPLKP-VT-I-IKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI 112 (357)
Q Consensus 37 ~~~~~~~l~~~~-~~~i~~~~~~~~~~~-~~-~-~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 112 (357)
-++...+|+.+. +..|+..++.+.... .. . ........++++++.+..|.-+ ..++.|...+.+.... +....+
T Consensus 24 ~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~-s~D~~v~iw~~~~~~~-~~~~~~ 101 (345)
T 3fm0_A 24 WNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA-SFDATTCIWKKNQDDF-ECVTTL 101 (345)
T ss_dssp ECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEEECCC-E-EEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE-ECCCcEEEEEccCCCe-EEEEEc
Confidence 344445555544 456888887663211 11 1 2345568899999876665544 4455666666654420 112233
Q ss_pred eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE
Q psy13635 113 TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW 192 (357)
Q Consensus 113 ~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~ 192 (357)
...-.....+++.+. ++++.+-...+.|...+++..........- .........+++.+.+..|.
T Consensus 102 ~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-------------~~h~~~v~~~~~~p~~~~l~- 166 (345)
T 3fm0_A 102 EGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVL-------------NSHTQDVKHVVWHPSQELLA- 166 (345)
T ss_dssp CCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTTSCEEEEEEE-------------CCCCSCEEEEEECSSSSCEE-
T ss_pred cCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCCCCeEEEEEe-------------cCcCCCeEEEEECCCCCEEE-
Confidence 333456788999974 555566666788888887654321111100 01112356677876555444
Q ss_pred EeCCCCeEEEEEcCCCceE--EEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce-----------EEE-
Q psy13635 193 TDTGTDRIEVCRLEGTHRK--VLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER-----------VLL- 258 (357)
Q Consensus 193 td~~~~~I~~~~~~g~~~~--~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~-----------~~~- 258 (357)
+-...+.|...+....... ............++++|.+..|..+..... -+|+.....+... ..+
T Consensus 167 s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSGSDPSWKCIC 245 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred EEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeeccCCccceeE
Confidence 4444567777766544321 222333456789999997666665554432 3555544333211 111
Q ss_pred -eeC-CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC-----eEE----EecCCCCceEEEEEEC--CEEEEEeCC
Q psy13635 259 -VKD-RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN-----RRE----LINENLPHVFGISLLG--DYVYWTDWQ 325 (357)
Q Consensus 259 -~~~-~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~-----~~~----i~~~~~~~p~gia~~~--~~ly~td~~ 325 (357)
... .......++..+.++.|..+ ...+.|...+.+... ... ...........+++.. ..++.+-..
T Consensus 246 ~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~ 324 (345)
T 3fm0_A 246 TLSGFHSRTIYDIAWCQLTGALATA-CGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD 324 (345)
T ss_dssp EECSSCSSCEEEEEECTTTCCEEEE-ETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEET
T ss_pred EecCCCCCcEEEEEEecCCCEEEEE-eCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCC
Confidence 111 12345678887655555444 445667766654321 111 1112233456677763 246666666
Q ss_pred CCeEEEEeCccCc
Q psy13635 326 RRSIDRVNKITGN 338 (357)
Q Consensus 326 ~~~I~~~~~~~g~ 338 (357)
.++|..-+..+++
T Consensus 325 Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 325 DGEVAFWKYQRPE 337 (345)
T ss_dssp TSCEEEEEECC--
T ss_pred CCcEEEEEecCCC
Confidence 6776655543333
No 267
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.14 E-value=0.17 Score=47.16 Aligned_cols=250 Identities=7% Similarity=0.025 Sum_probs=139.3
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCC
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLT 128 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~ 128 (357)
...|+..|+.................+++++ ++. +++...++.|...++.... ....+.........+++| +
T Consensus 178 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~-l~s~s~dg~i~~wd~~~~~---~~~~~~~~~~~v~~~~~~--~ 249 (445)
T 2ovr_B 178 DRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKR-VVSGSRDATLRVWDIETGQ---CLHVLMGHVAAVRCVQYD--G 249 (445)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTE-EEEEETTSEEEEEESSSCC---EEEEEECCSSCEEEEEEC--S
T ss_pred CCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCE-EEEEeCCCEEEEEECCCCc---EEEEEcCCcccEEEEEEC--C
Confidence 4578889987644333333445567788886 344 4455566788888887653 233343344455666663 4
Q ss_pred CeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC
Q psy13635 129 EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT 208 (357)
Q Consensus 129 ~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~ 208 (357)
+. +++-..++.|...++............ -.....+++| +.. +++....+.|...++...
T Consensus 250 ~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~----------------~~~v~~~~~~--~~~-l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 250 RR-VVSGAYDFMVKVWDPETETCLHTLQGH----------------TNRVYSLQFD--GIH-VVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp SC-EEEEETTSCEEEEEGGGTEEEEEECCC----------------SSCEEEEEEC--SSE-EEEEETTSCEEEEETTTC
T ss_pred CE-EEEEcCCCEEEEEECCCCcEeEEecCC----------------CCceEEEEEC--CCE-EEEEeCCCeEEEEECCCC
Confidence 44 445555788888887654332222110 1123445553 344 445555678888888654
Q ss_pred ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC---CCCCceEEEEecCCCEEEEEeCCC
Q psy13635 209 HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD---RLGWPNGITLDVDNEKLYWCDAKT 285 (357)
Q Consensus 209 ~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~---~l~~P~giaid~~~~~lY~~d~~~ 285 (357)
...............++.+ ...|+.+... +.|...++........+.. .......++++ ++. .++-...
T Consensus 310 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~-l~s~~~d 381 (445)
T 2ovr_B 310 NCIHTLTGHQSLTSGMELK--DNILVSGNAD---STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNF-VITSSDD 381 (445)
T ss_dssp CEEEEECCCCSCEEEEEEE--TTEEEEEETT---SCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSE-EEEEETT
T ss_pred CEEEEEcCCcccEEEEEEe--CCEEEEEeCC---CeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCE-EEEEeCC
Confidence 4333333334456677776 3555555544 5788888765444333322 22345677774 344 4455567
Q ss_pred CeEEEEeCCC-CCeEEEec----CCCCceEEEEEEC-CEEEEEeCCCCe----EEEEeC
Q psy13635 286 DKIEMIDFDG-NNRRELIN----ENLPHVFGISLLG-DYVYWTDWQRRS----IDRVNK 334 (357)
Q Consensus 286 ~~I~~~~~dG-~~~~~i~~----~~~~~p~gia~~~-~~ly~td~~~~~----I~~~~~ 334 (357)
+.|...+... .....+.. .......++++.. +.+..+-...+. |..++.
T Consensus 382 g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 382 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 8899998754 44444421 1233456777775 444445444454 666654
No 268
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.23 Score=51.26 Aligned_cols=199 Identities=10% Similarity=-0.024 Sum_probs=123.5
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG 196 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~ 196 (357)
..+..+|+++.++ +..+-..++.|...+..+........ .-.....+++.+ +. +.++-..
T Consensus 18 ~~V~~lafspdg~-~lAsgs~Dg~I~lw~~~~~~~~~~~~-----------------~~~~V~~l~fsp-g~-~L~S~s~ 77 (902)
T 2oaj_A 18 SKPIAAAFDFTQN-LLAIATVTGEVHIYGQQQVEVVIKLE-----------------DRSAIKEMRFVK-GI-YLVVINA 77 (902)
T ss_dssp SCEEEEEEETTTT-EEEEEETTSEEEEECSTTCEEEEECS-----------------SCCCEEEEEEET-TT-EEEEEET
T ss_pred CCcEEEEECCCCC-EEEEEeCCCEEEEEeCCCcEEEEEcC-----------------CCCCEEEEEEcC-CC-EEEEEEC
Confidence 4578899998655 44555567889988876543322211 012457788887 44 4445555
Q ss_pred CCeEEEEEcCCCc-eEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEe-----------eCCCC
Q psy13635 197 TDRIEVCRLEGTH-RKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLV-----------KDRLG 264 (357)
Q Consensus 197 ~~~I~~~~~~g~~-~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~-----------~~~l~ 264 (357)
.+.|..-+++... ...+. .-.....++++|....|+..... +.|...++++....... .....
T Consensus 78 D~~v~lWd~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~d---g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 78 KDTVYVLSLYSQKVLTTVF--VPGKITSIDTDASLDWMLIGLQN---GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp TCEEEEEETTTCSEEEEEE--CSSCEEEEECCTTCSEEEEEETT---SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred cCeEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEcCC---CcEEEEECCCCccccceeccccccccccccCCC
Confidence 6788888887543 33332 22467899999987788887765 57888888766543211 11234
Q ss_pred CceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecCC------------------CCceEEEEEE-CCEEEEEeCC
Q psy13635 265 WPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINEN------------------LPHVFGISLL-GDYVYWTDWQ 325 (357)
Q Consensus 265 ~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~------------------~~~p~gia~~-~~~ly~td~~ 325 (357)
...++++++.++.+..+-...+.| ..+.........+... ......+++. +|..+.+-..
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 567899987555555566667788 8887655433222211 1235677776 4566666666
Q ss_pred CCeEEEEeCccCceeE
Q psy13635 326 RRSIDRVNKITGNDRE 341 (357)
Q Consensus 326 ~~~I~~~~~~~g~~~~ 341 (357)
.+.|...+..+|+...
T Consensus 232 Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 232 DNSLVFWDANSGHMIM 247 (902)
T ss_dssp TCCEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEEE
Confidence 7788888876666543
No 269
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.98 E-value=0.2 Score=45.45 Aligned_cols=259 Identities=9% Similarity=0.003 Sum_probs=131.9
Q ss_pred EEEEEe-CCcEEEEEcCCCCc-ceEecc--CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC-c-
Q psy13635 43 MLLFAT-SKDIRIANLSRPLK-PVTIIK--DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG-L- 116 (357)
Q Consensus 43 ~l~~~~-~~~i~~~~~~~~~~-~~~~~~--~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~-~- 116 (357)
.+++.. ...|..+|...+.. ...... ....|. ++ ++.+|+.. .++.|+.++..... .....-... .
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~---~~--~~~v~v~~-~~g~l~~~d~~tG~--~~W~~~~~~~~~ 176 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPV---VS--DGLVLIHT-SNGQLQALNEADGA--VKWTVNLDMPSL 176 (376)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCE---EE--TTEEEEEC-TTSEEEEEETTTCC--EEEEEECCC---
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCE---EE--CCEEEEEc-CCCeEEEEECCCCc--EEEEEeCCCCce
Confidence 355555 35688888764221 122211 111222 22 57777654 45678888875432 112221111 0
Q ss_pred --CCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCceEEEEecCCCCcceeeeeccCccccc-CCceEEEeCCCCeEEE
Q psy13635 117 --ITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKKRKVLYWEDIDQPRAIASYKLPTIEVE-HPDGVAVDWVARNLYW 192 (357)
Q Consensus 117 --~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~~~~~~~~~~~~p~~i~~~~~~~~~~~-~p~glavD~~~~~lY~ 192 (357)
......+++ ++.+|+.. ..+.+..++.. |+..-.. .. ..|.+..- .+.+. .....+++ ++.+|+
T Consensus 177 ~~~~~~~~~~~--~~~v~~g~-~~g~l~~~d~~tG~~~w~~-~~--~~~~~~~~----~~~~~~~~~~p~~~--~~~v~~ 244 (376)
T 3q7m_A 177 SLRGESAPTTA--FGAAVVGG-DNGRVSAVLMEQGQMIWQQ-RI--SQATGSTE----IDRLSDVDTTPVVV--NGVVFA 244 (376)
T ss_dssp --CCCCCCEEE--TTEEEECC-TTTEEEEEETTTCCEEEEE-EC--CC---------------CCCCCCEEE--TTEEEE
T ss_pred eecCCCCcEEE--CCEEEEEc-CCCEEEEEECCCCcEEEEE-ec--ccCCCCcc----cccccccCCCcEEE--CCEEEE
Confidence 111334555 57777754 46788888874 4432221 11 11110000 00000 00111233 578888
Q ss_pred EeCCCCeEEEEEcC-CCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEee-CCCCCceEEE
Q psy13635 193 TDTGTDRIEVCRLE-GTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVK-DRLGWPNGIT 270 (357)
Q Consensus 193 td~~~~~I~~~~~~-g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~-~~l~~P~gia 270 (357)
... .+.+..+++. |+..-.. ....+.+++++ +++||++... +.+...+.......--.. ..-......+
T Consensus 245 ~~~-~g~l~~~d~~tG~~~w~~---~~~~~~~~~~~--~~~l~~~~~~---g~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 315 (376)
T 3q7m_A 245 LAY-NGNLTALDLRSGQIMWKR---ELGSVNDFIVD--GNRIYLVDQN---DRVMALTIDGGVTLWTQSDLLHRLLTSPV 315 (376)
T ss_dssp ECT-TSCEEEEETTTCCEEEEE---CCCCEEEEEEE--TTEEEEEETT---CCEEEEETTTCCEEEEECTTTTSCCCCCE
T ss_pred Eec-CcEEEEEECCCCcEEeec---cCCCCCCceEE--CCEEEEEcCC---CeEEEEECCCCcEEEeecccCCCcccCCE
Confidence 764 4678888875 5443222 23446677777 6899999865 589999876443322222 1111222334
Q ss_pred EecCCCEEEEEeCCCCeEEEEeCC-CCCeEEEecCCCCceEEEEEECCEEEEEeCCCCeEEEEeC
Q psy13635 271 LDVDNEKLYWCDAKTDKIEMIDFD-GNNRRELINENLPHVFGISLLGDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 271 id~~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~~~~~~~p~gia~~~~~ly~td~~~~~I~~~~~ 334 (357)
+ .+++||+.+. .+.++.++.. |......-...........+.++.||+... .+.|+.+++
T Consensus 316 ~--~~~~l~v~~~-~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~-~G~l~~~~~ 376 (376)
T 3q7m_A 316 L--YNGNLVVGDS-EGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAK-DGTVYSITR 376 (376)
T ss_dssp E--ETTEEEEECT-TSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBT-TSCEEEEEC
T ss_pred E--ECCEEEEEeC-CCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeC-CCEEEEEeC
Confidence 4 3789998875 5689999864 443322221111112234456899999875 477887763
No 270
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.93 E-value=0.15 Score=43.16 Aligned_cols=152 Identities=12% Similarity=0.027 Sum_probs=96.2
Q ss_pred eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC-------CceEEEEecCCCCcceeeeeccCcccccCCceEEEeC
Q psy13635 113 TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG-------KKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDW 185 (357)
Q Consensus 113 ~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g-------~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~ 185 (357)
..+..+...+|++| ++.||.. .++.+++.+... .....+...+ .+.-..+.+|
T Consensus 37 ~~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~G----------------w~~F~a~~fD- 96 (236)
T 1tl2_A 37 KGGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGG----------------WNQFQFLFFD- 96 (236)
T ss_dssp SSSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSC----------------GGGCSEEEEC-
T ss_pred ccccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccc----------------cccceEEEEC-
Confidence 33567888999998 8999999 577899988743 1123333222 1234678889
Q ss_pred CCCeEEEEeCCCCeEEEEEc--CCCc-----eEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC-CC----
Q psy13635 186 VARNLYWTDTGTDRIEVCRL--EGTH-----RKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-GG---- 253 (357)
Q Consensus 186 ~~~~lY~td~~~~~I~~~~~--~g~~-----~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-g~---- 253 (357)
.+|.||.. ..++|++.++ ++.. ...+...+...-..|.++|. |.||-+. . +++++-..- +.
T Consensus 97 ~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~-G~Lyav~-d---g~lyr~~~P~~~~~~w 169 (236)
T 1tl2_A 97 PNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPN-GYLYAVH-G---QQFYKALPPVSNQDNW 169 (236)
T ss_dssp TTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTT-SCEEEEE-T---TEEEEECCCSSTTCCH
T ss_pred CCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCC-ceEEEEe-C---CcEEecCCCCCCCccc
Confidence 68899988 3379999987 3332 23444445566689999985 9999998 5 367654332 11
Q ss_pred --ceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 254 --ERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 254 --~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
....+...+...-.-+.++ .++.||..+ .+++++...+
T Consensus 170 l~~~~~~g~~g~~~yr~l~f~-~~G~l~~v~--~g~~Y~~~~p 209 (236)
T 1tl2_A 170 LARATKIGQGGWDTFKFLFFS-SVGTLFGVQ--GGKFYEDYPP 209 (236)
T ss_dssp HHHCEEEESSSGGGEEEEEEC-TTSCEEEEE--TTEEEEESCC
T ss_pred ccccceeccCCcceEEEEEEC-CCCcEEEEe--CCeEEecCCc
Confidence 1122222222222224455 688888888 6788888655
No 271
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.90 E-value=0.41 Score=47.70 Aligned_cols=260 Identities=11% Similarity=0.026 Sum_probs=132.5
Q ss_pred EEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC-C----cCCceeEEEEcCCCeEEEEeCC-----CCEEEEE
Q psy13635 75 AIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-G----LITPDGLAIDWLTEKLYWTDSE-----TNKLEVS 144 (357)
Q Consensus 75 ~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-~----~~~p~glavd~~~~~ly~td~~-----~~~I~~~ 144 (357)
+++++ +++||+.. .++.|+.++..... .....-.. . ........++ ++.+|+.... .+.|..+
T Consensus 123 ~~a~~--~~~v~v~~-~dg~l~alD~~tG~--~~W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~ 195 (677)
T 1kb0_A 123 GVALW--KGKVYVGA-WDGRLIALDAATGK--EVWHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAY 195 (677)
T ss_dssp CCEEE--TTEEEEEC-TTSEEEEEETTTCC--EEEEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEE
T ss_pred CceEE--CCEEEEEc-CCCEEEEEECCCCC--EEeeecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEE
Confidence 44443 68899874 34688888885443 12222221 1 1112233454 6889987653 5789999
Q ss_pred EcC-CCceEEEEecCCCCcceeee---ec-----cC--------cccccCCceEEEeCCCCeEEEEeCCC----------
Q psy13635 145 SLD-GKKRKVLYWEDIDQPRAIAS---YK-----LP--------TIEVEHPDGVAVDWVARNLYWTDTGT---------- 197 (357)
Q Consensus 145 ~~~-g~~~~~~~~~~~~~p~~i~~---~~-----~~--------~~~~~~p~glavD~~~~~lY~td~~~---------- 197 (357)
+.. |+.+-..-... ..+..... ++ .+ ......-..+++|+..+.||+.....
T Consensus 196 D~~tG~~~W~~~~~~-~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~ 274 (677)
T 1kb0_A 196 DAETGERKWRWFSVP-GDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSP 274 (677)
T ss_dssp ETTTCCEEEEEESSC-CCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHST
T ss_pred ECCCCcEEEEeccCC-CCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCc
Confidence 875 44332221111 00000000 00 00 00000114689999999999876532
Q ss_pred --------CeEEEEEcC-CCceEEEecCC--------CCCce------------EEEEeCCCCEEEEEeCCCCCCeEEEE
Q psy13635 198 --------DRIEVCRLE-GTHRKVLVNTD--------LVEPR------------AITLSPAHGYLFWSDWNEKRPKIERS 248 (357)
Q Consensus 198 --------~~I~~~~~~-g~~~~~~~~~~--------~~~P~------------giavd~~~g~Ly~~d~~~~~~~I~~~ 248 (357)
..|..+|.+ |+.+-..-... ...|. -+.+...+|.||+-|..+. ..+++.
T Consensus 275 ~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG-~~l~~~ 353 (677)
T 1kb0_A 275 KGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG-KFISAK 353 (677)
T ss_dssp TCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC-CEEEEE
T ss_pred cCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC-CEeccc
Confidence 258888876 44332221110 12232 2333345677777776643 344554
Q ss_pred ecCCCc---------eEEE------------eeC---CCCCceEEEEecCCCEEEEEeCC--------------------
Q psy13635 249 LLNGGE---------RVLL------------VKD---RLGWPNGITLDVDNEKLYWCDAK-------------------- 284 (357)
Q Consensus 249 ~~dg~~---------~~~~------------~~~---~l~~P~giaid~~~~~lY~~d~~-------------------- 284 (357)
...... +... ... +...-.++++|+..+.+|+....
T Consensus 354 ~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~ 433 (677)
T 1kb0_A 354 NFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGK 433 (677)
T ss_dssp ESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTS
T ss_pred cccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccc
Confidence 433211 1000 000 00111378999889999986321
Q ss_pred ----------------------CCeEEEEeCCCCCeEEEecCCCCceEE--EEEECCEEEEEeCCCCeEEEEeCccCcee
Q psy13635 285 ----------------------TDKIEMIDFDGNNRRELINENLPHVFG--ISLLGDYVYWTDWQRRSIDRVNKITGNDR 340 (357)
Q Consensus 285 ----------------------~~~I~~~~~dG~~~~~i~~~~~~~p~g--ia~~~~~ly~td~~~~~I~~~~~~~g~~~ 340 (357)
.+.|..+|+......--..... .+.+ ++..++.+|+. ...+.++.++..+|+.+
T Consensus 434 ~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 434 PQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKL 511 (677)
T ss_dssp TTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEE
T ss_pred cccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC-CCcCcceEeCCCEEEEE-CCCCcEEEEECCCCcee
Confidence 1568888875433222211111 1122 44457888887 46688999998889887
Q ss_pred EEEec
Q psy13635 341 EVIIE 345 (357)
Q Consensus 341 ~~i~~ 345 (357)
..+..
T Consensus 512 w~~~~ 516 (677)
T 1kb0_A 512 WEAPT 516 (677)
T ss_dssp EEEEC
T ss_pred eeeeC
Confidence 76643
No 272
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.42 Score=49.35 Aligned_cols=196 Identities=7% Similarity=-0.065 Sum_probs=120.0
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
..+.+++|++.+..|.. ...++.|+..+..+.. .......-.....+++.+ ++ +.++-...+.|...++....
T Consensus 18 ~~V~~lafspdg~~lAs-gs~Dg~I~lw~~~~~~----~~~~~~~~~~V~~l~fsp-g~-~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAI-ATVTGEVHIYGQQQVE----VVIKLEDRSAIKEMRFVK-GI-YLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp SCEEEEEEETTTTEEEE-EETTSEEEEECSTTCE----EEEECSSCCCEEEEEEET-TT-EEEEEETTCEEEEEETTTCS
T ss_pred CCcEEEEECCCCCEEEE-EeCCCEEEEEeCCCcE----EEEEcCCCCCEEEEEEcC-CC-EEEEEECcCeEEEEECCCCc
Confidence 46789999997665544 4456788887776652 222223334578899997 44 44455567899999987544
Q ss_pred eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEe-----------cCCCC
Q psy13635 151 RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLV-----------NTDLV 219 (357)
Q Consensus 151 ~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~-----------~~~~~ 219 (357)
........ .....+++++.+..|+.... .+.|...++++....... .....
T Consensus 91 ~~~~~~~~-----------------~~V~~v~~sp~g~~l~sgs~-dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 91 VLTTVFVP-----------------GKITSIDTDASLDWMLIGLQ-NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp EEEEEECS-----------------SCEEEEECCTTCSEEEEEET-TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred EEEEEcCC-----------------CCEEEEEECCCCCEEEEEcC-CCcEEEEECCCCccccceeccccccccccccCCC
Confidence 32222110 14567888877777776554 578888888765542111 11234
Q ss_pred CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC------------------CCCceEEEEecCCCEEEEE
Q psy13635 220 EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR------------------LGWPNGITLDVDNEKLYWC 281 (357)
Q Consensus 220 ~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~------------------l~~P~giaid~~~~~lY~~ 281 (357)
....++++|.++.+..+-... +.| ..++........+... -....++++.+. +..+.+
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~d--g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd-g~~las 228 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEY--VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN-SLHIIT 228 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSS--CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT-SSEEEE
T ss_pred CeEEEEEccCCCCEEEEEeCC--CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC-CCEEEE
Confidence 578999998654444444442 577 7777665443333211 134678999865 555555
Q ss_pred eCCCCeEEEEeCCC
Q psy13635 282 DAKTDKIEMIDFDG 295 (357)
Q Consensus 282 d~~~~~I~~~~~dG 295 (357)
-...+.|...+...
T Consensus 229 gs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 229 IHEDNSLVFWDANS 242 (902)
T ss_dssp EETTCCEEEEETTT
T ss_pred EECCCeEEEEECCC
Confidence 55677888888754
No 273
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.83 E-value=0.3 Score=45.10 Aligned_cols=269 Identities=7% Similarity=0.015 Sum_probs=156.6
Q ss_pred eEEEEEeCCcEEEEEcCCCCcceEec--cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc
Q psy13635 42 QMLLFATSKDIRIANLSRPLKPVTII--KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP 119 (357)
Q Consensus 42 ~~l~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p 119 (357)
..|.++-++.|+..|+..+....... .......+|+|.+.+..|. +...++.|...++.... ........-...
T Consensus 117 n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~la-sgs~Dg~v~iWd~~~~~---~~~~~~~h~~~v 192 (420)
T 4gga_A 117 NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA-VGTSSAEVQLWDVQQQK---RLRNMTSHSARV 192 (420)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE-EEETTSCEEEEETTTTE---EEEEECCCSSCE
T ss_pred CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEE-EEECCCeEEEEEcCCCc---EEEEEeCCCCce
Confidence 36667778889999987643333222 2334578999998655554 55566788888887653 222333223334
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCe
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDR 199 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~ 199 (357)
..++.+ + .+..+....+.+...+............+ ......++...+.+. ...+....+.
T Consensus 193 ~~~s~~--~-~~l~sgs~d~~i~~~d~~~~~~~~~~~~~---------------h~~~~~~~~~~~~g~-~l~s~~~D~~ 253 (420)
T 4gga_A 193 GSLSWN--S-YILSSGSRSGHIHHHDVRVAEHHVATLSG---------------HSQEVCGLRWAPDGR-HLASGGNDNL 253 (420)
T ss_dssp EEEEEE--T-TEEEEEETTSEEEEEETTSSSCEEEEEEC---------------CSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred EEEeeC--C-CEEEEEeCCCceeEeeecccceeeEEecc---------------cccceeeeeecCCCC-eeeeeecccc
Confidence 444444 3 45556666778888776654433222111 112345566665444 4445555567
Q ss_pred EEEEEcCCCce----EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCC
Q psy13635 200 IEVCRLEGTHR----KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDN 275 (357)
Q Consensus 200 I~~~~~~g~~~----~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~ 275 (357)
|...+...... .............+++.|..+.++.+-.+...+.|...++........+.. -..+..+...+.+
T Consensus 254 v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~-~~~v~~~~~~~~~ 332 (420)
T 4gga_A 254 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-HSQVCSILWSPHY 332 (420)
T ss_dssp EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-SSCEEEEEEETTT
T ss_pred ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-ccceeeeeecCCC
Confidence 77776653211 111222334567888988777776665433235787778776555444433 2456788888788
Q ss_pred CEEEEEeC-CCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 276 EKLYWCDA-KTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 276 ~~lY~~d~-~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
+.++.+.. ..+.|...+.........+..+-....++++. +|...+|-...++|..-+.
T Consensus 333 ~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 333 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred CeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 88877653 45788888876544433444445566788886 4555666556677654443
No 274
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.78 E-value=0.3 Score=44.41 Aligned_cols=197 Identities=8% Similarity=-0.045 Sum_probs=112.7
Q ss_pred EEEEEEEccCCEEEEEeC-CCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEc-CCCc
Q psy13635 73 GAAIDYYYKKSMVCWTDH-GTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSL-DGKK 150 (357)
Q Consensus 73 ~~~i~~d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~-~g~~ 150 (357)
...++|+|++..|..+.. .++.|+..++.... ....+. .-....++++.+.++.|..+ . .+.+.++.. +|..
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~---~~~~~~-~~~~V~~v~fspdg~~l~s~-s-~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLT---EKFEIE-TRGEVKDLHFSTDGKVVAYI-T-GSSLEVISTVTGSC 209 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTE---EEEEEE-CSSCCCEEEECTTSSEEEEE-C-SSCEEEEETTTCCE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc---EEEEeC-CCCceEEEEEccCCceEEec-c-ceeEEEEEeccCcc
Confidence 678999998777777654 45678888887663 222222 33457899999866555444 3 344555554 3433
Q ss_pred eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCC---eEEEEEcCCCceEE----EecCCCCCceE
Q psy13635 151 RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTD---RIEVCRLEGTHRKV----LVNTDLVEPRA 223 (357)
Q Consensus 151 ~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~---~I~~~~~~g~~~~~----~~~~~~~~P~g 223 (357)
........ .-.....+++.+.+..+..+..... .+...+........ ...........
T Consensus 210 ~~~~~~~~---------------~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~ 274 (365)
T 4h5i_A 210 IARKTDFD---------------KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITS 274 (365)
T ss_dssp EEEECCCC---------------TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEE
T ss_pred eeeeecCC---------------CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEe
Confidence 22211110 1113456777766655554433222 34445544332211 12233455789
Q ss_pred EEEeCCCCEEEEEeCCCCCCeEEEEecCCCceE-EEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 224 ITLSPAHGYLFWSDWNEKRPKIERSLLNGGERV-LLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 224 iavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~-~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
++++|.+..|..+... +.|...+....... .+....-....++++.+ ++++.++-+..+.|+..++.
T Consensus 275 ~~~Spdg~~lasgs~D---~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 275 MDVDMKGELAVLASND---NSIALVKLKDLSMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEECTTSCEEEEEETT---SCEEEEETTTTEEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECC
T ss_pred EEECCCCCceEEEcCC---CEEEEEECCCCcEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcC
Confidence 9999975555555444 57888887654443 33333345578999985 55555666667788888764
No 275
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.75 E-value=0.084 Score=44.74 Aligned_cols=147 Identities=10% Similarity=-0.018 Sum_probs=92.2
Q ss_pred ccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCC-------CceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEE
Q psy13635 175 VEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEG-------THRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIER 247 (357)
Q Consensus 175 ~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g-------~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~ 247 (357)
......+|++| ++.||.. ..+.+++.++.. ...+.+-..+...=..+.+|+ +|.||... . ++|+|
T Consensus 40 w~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav~-d---G~iyr 111 (236)
T 1tl2_A 40 WSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAVS-K---DKLYK 111 (236)
T ss_dssp CTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEEE-T---TEEEE
T ss_pred cccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEeC-C---CEEEE
Confidence 45677999998 8999988 456899988743 223344333444457899997 59999993 2 59999
Q ss_pred Eec--CCCce-----EEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEe-CCCC------CeEEEecCCCCceEEEE
Q psy13635 248 SLL--NGGER-----VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMID-FDGN------NRRELINENLPHVFGIS 313 (357)
Q Consensus 248 ~~~--dg~~~-----~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~-~dG~------~~~~i~~~~~~~p~gia 313 (357)
.+. ++... ..+...+-..-..|.++ .+|.||-.. .+++++-. +.+. ..+.+.......-.-+.
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~-p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~ 188 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFH-PNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLF 188 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEEC-TTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEEC-CCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEE
Confidence 987 44322 34433344455788998 689999888 45565533 3222 12223222221111133
Q ss_pred EE-CCEEEEEeCCCCeEEEEeC
Q psy13635 314 LL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 314 ~~-~~~ly~td~~~~~I~~~~~ 334 (357)
+. ++.||..+ ++++++...
T Consensus 189 f~~~G~l~~v~--~g~~Y~~~~ 208 (236)
T 1tl2_A 189 FSSVGTLFGVQ--GGKFYEDYP 208 (236)
T ss_dssp ECTTSCEEEEE--TTEEEEESC
T ss_pred ECCCCcEEEEe--CCeEEecCC
Confidence 33 57888888 778888764
No 276
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.68 E-value=0.33 Score=43.45 Aligned_cols=241 Identities=13% Similarity=0.042 Sum_probs=131.2
Q ss_pred cEEEEEE-----EccCCEEEEEeCCCCeEEEEEcCCCCc----ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEE
Q psy13635 72 EGAAIDY-----YYKKSMVCWTDHGTEMISCCTFDGNNV----GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLE 142 (357)
Q Consensus 72 ~~~~i~~-----d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~ 142 (357)
...++++ .+.++.+..+-..++.|+..++..... ......+.........+++.+ .+.+.++-...+.|.
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s~D~~v~ 101 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSSWDKTLR 101 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEEEETTSEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEEEcCCCcEE
Confidence 4566666 443566666766677777777653321 011223333345577899986 455556666788999
Q ss_pred EEEcCCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEec--CCCC
Q psy13635 143 VSSLDGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVN--TDLV 219 (357)
Q Consensus 143 ~~~~~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~--~~~~ 219 (357)
..++..... ..+... -.....+++.+.+..|. +-...+.|...+..+........ ....
T Consensus 102 lwd~~~~~~~~~~~~h-----------------~~~v~~v~~sp~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 102 LWDLRTGTTYKRFVGH-----------------QSEVYSVAFSPDNRQIL-SAGAEREIKLWNILGECKFSSAEKENHSD 163 (343)
T ss_dssp EEETTSSCEEEEEECC-----------------CSCEEEEEECSSTTEEE-EEETTSCEEEEESSSCEEEECCTTTSCSS
T ss_pred EEECCCCcEEEEEcCC-----------------CCcEEEEEECCCCCEEE-EEcCCCEEEEEeccCCceeeeecccCCCc
Confidence 999865433 222211 12456788887666555 44455788888887654333221 1223
Q ss_pred CceEEEEeCCC----------CEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEE
Q psy13635 220 EPRAITLSPAH----------GYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIE 289 (357)
Q Consensus 220 ~P~giavd~~~----------g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~ 289 (357)
....++++|.. ..+..+... +.|...+..+.....+ ...-.....+++.+.+ +...+-...+.|.
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~-~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWD---GRLKVWNTNFQIRYTF-KAHESNVNHLSISPNG-KYIATGGKDKKLL 238 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETT---SEEEEEETTTEEEEEE-ECCSSCEEEEEECTTS-SEEEEEETTCEEE
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCC---CEEEEEcCCCceeEEE-cCccccceEEEECCCC-CEEEEEcCCCeEE
Confidence 45677777653 234333333 4777777544332222 2333456889998654 4445555677888
Q ss_pred EEeCC-CCCeEEEecCCCCceEEEEEEC-CEEEEEeCCCCeEEEEeCccCc
Q psy13635 290 MIDFD-GNNRRELINENLPHVFGISLLG-DYVYWTDWQRRSIDRVNKITGN 338 (357)
Q Consensus 290 ~~~~d-G~~~~~i~~~~~~~p~gia~~~-~~ly~td~~~~~I~~~~~~~g~ 338 (357)
..+.. ......... .......+++.. +.+..+ ...+.|...+..+++
T Consensus 239 iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 239 IWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQS 287 (343)
T ss_dssp EEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCC
T ss_pred EEECCCCcccceeec-CCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCC
Confidence 88873 332222221 122355666653 332222 223456656654444
No 277
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.66 E-value=0.37 Score=43.79 Aligned_cols=196 Identities=8% Similarity=0.031 Sum_probs=115.0
Q ss_pred ceeEEEEcCCCeEEEEeC-CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 119 PDGLAIDWLTEKLYWTDS-ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 119 p~glavd~~~~~ly~td~-~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
+..+++.|.++.|.++.. ..+.|...++............ ....++++.|.+..|..+ . .
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~-----------------~~V~~v~fspdg~~l~s~-s-~ 196 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR-----------------GEVKDLHFSTDGKVVAYI-T-G 196 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECS-----------------SCCCEEEECTTSSEEEEE-C-S
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC-----------------CceEEEEEccCCceEEec-c-c
Confidence 567999988877777554 4678988898765443333211 246788998766555443 3 3
Q ss_pred CeEEEEEcC-CCceEEEec-CCCCCceEEEEeCCCCEEEEEeCCCC-CCeEEEEecCCCceEE----EeeCCCCCceEEE
Q psy13635 198 DRIEVCRLE-GTHRKVLVN-TDLVEPRAITLSPAHGYLFWSDWNEK-RPKIERSLLNGGERVL----LVKDRLGWPNGIT 270 (357)
Q Consensus 198 ~~I~~~~~~-g~~~~~~~~-~~~~~P~giavd~~~g~Ly~~d~~~~-~~~I~~~~~dg~~~~~----~~~~~l~~P~gia 270 (357)
+.+.+.+.. |........ ..-.....+++.|.+..+..+..... ...+...+........ .+........+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~ 276 (365)
T 4h5i_A 197 SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMD 276 (365)
T ss_dssp SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEE
T ss_pred eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEE
Confidence 456666544 443322222 12234678999987555555443321 1134555544333222 1223344567899
Q ss_pred EecCCCEEEEEeCCCCeEEEEeCCCCC-eEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 271 LDVDNEKLYWCDAKTDKIEMIDFDGNN-RRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 271 id~~~~~lY~~d~~~~~I~~~~~dG~~-~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
+.+++..| .+-...+.|...+..... ...+.........++++. ++....+-+..++|+..+.
T Consensus 277 ~Spdg~~l-asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 277 VDMKGELA-VLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp ECTTSCEE-EEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred ECCCCCce-EEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 98655544 444456789888875433 334443345566888887 4677777777788887775
No 278
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.64 E-value=0.45 Score=44.52 Aligned_cols=228 Identities=6% Similarity=-0.033 Sum_probs=127.3
Q ss_pred CcEEEEEEEccCCEEEE---EeCCCCeEEEEEcCCC-----Cc---ceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCC
Q psy13635 71 EEGAAIDYYYKKSMVCW---TDHGTEMISCCTFDGN-----NV---GSKHNVITNGLITPDGLAIDWLTEKLYWTDSETN 139 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~---~d~~~~~I~~~~~~g~-----~~---~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~ 139 (357)
..+.++++++.+..|++ +...++.|+..++... .. ..........-..+.++++++..+.++.+-..++
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 35889999998888887 5555677777776532 00 0001111112346788999987678888877889
Q ss_pred EEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCC-C
Q psy13635 140 KLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTD-L 218 (357)
Q Consensus 140 ~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~-~ 218 (357)
.|...++......... .+ .-..+.++++.+.+..|+.+. ..+.|...+.++.....+.... .
T Consensus 173 ~v~iwD~~~~~~~~~~-~~---------------~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~~~~~~~ 235 (434)
T 2oit_A 173 SIAVLQVTETVKVCAT-LP---------------STVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVIPCPPFY 235 (434)
T ss_dssp CEEEEEESSSEEEEEE-EC---------------GGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEECCCTTC
T ss_pred eEEEEEcCCCcceeec-cC---------------CCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccccCCccc
Confidence 9999998765322111 11 012567888887766666554 5678999998865544442211 1
Q ss_pred C-----CceEEEEeCCCCEEEEEeCCCC----CCeEEEEecCCC--c--eE--EEeeC----CCCCceEEEEe--cCCCE
Q psy13635 219 V-----EPRAITLSPAHGYLFWSDWNEK----RPKIERSLLNGG--E--RV--LLVKD----RLGWPNGITLD--VDNEK 277 (357)
Q Consensus 219 ~-----~P~giavd~~~g~Ly~~d~~~~----~~~I~~~~~dg~--~--~~--~~~~~----~l~~P~giaid--~~~~~ 277 (357)
. ...+++.++....+.....+.. ...+...++... . .. ..... +..++..+.+. +.-+.
T Consensus 236 ~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l 315 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDL 315 (434)
T ss_dssp CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTE
T ss_pred CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCE
Confidence 1 3456777764322222222210 123445554422 1 11 11111 12222233333 45688
Q ss_pred EEEEeCCCCeEEEEeCCCCC--eE-EEec----------C--CCCceEEEEEE
Q psy13635 278 LYWCDAKTDKIEMIDFDGNN--RR-ELIN----------E--NLPHVFGISLL 315 (357)
Q Consensus 278 lY~~d~~~~~I~~~~~dG~~--~~-~i~~----------~--~~~~p~gia~~ 315 (357)
+|++......|..+..++.. -+ .... + .-..|.|+++|
T Consensus 316 ~~v~s~~s~dv~vl~~~~~~~~~~~~~~~d~~ra~lP~~~~~~dt~piG~~~d 368 (434)
T 2oit_A 316 VLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVD 368 (434)
T ss_dssp EEEEETTCSBCEEEEECTTSSCEEEEEECGGGCCBCCBCTTSCBCCEEEEEEE
T ss_pred EEEecCCCCceeEEEecCCCCccEEEeccccccccccCCCCCCCceeeEEEEE
Confidence 89999988888887765432 11 1111 1 13468999998
No 279
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.63 E-value=0.57 Score=45.65 Aligned_cols=78 Identities=12% Similarity=0.107 Sum_probs=48.5
Q ss_pred eEEEEecCCCEEEEEeC------------------------------------CCCeEEEEeCC-CCCeEEEecCCCCce
Q psy13635 267 NGITLDVDNEKLYWCDA------------------------------------KTDKIEMIDFD-GNNRRELINENLPHV 309 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~------------------------------------~~~~I~~~~~d-G~~~~~i~~~~~~~p 309 (357)
.++++|+..+.+|+... ..+.+..+|.. |+.+-..-...-...
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~ 468 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG 468 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc
Confidence 35789988999998742 23678888875 433322211111111
Q ss_pred EEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 310 FGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 310 ~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
..+...++.+|+.. ..+.|+.++..+|+.+..+..
T Consensus 469 ~~~~t~gg~v~~g~-~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 469 GTLYTKGGLVWYAT-LDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp BCEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEEC
T ss_pred eeEEECCCEEEEEc-CCCeEEEEECCCCCEEEEEeC
Confidence 11344478888864 558899999888988766544
No 280
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.62 E-value=0.43 Score=44.02 Aligned_cols=234 Identities=10% Similarity=0.015 Sum_probs=126.9
Q ss_pred CCeEEEEEe-CCcEEEEEcCC---CC--cceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcC----CCCcceeE
Q psy13635 40 AAQMLLFAT-SKDIRIANLSR---PL--KPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFD----GNNVGSKH 109 (357)
Q Consensus 40 ~~~~l~~~~-~~~i~~~~~~~---~~--~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~----g~~~~~~~ 109 (357)
...+|+.+. +..|+..|+.. .. ...........+.++++.+.++.|. +-..++.|...+++ |.. .
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~dg~i~vwd~~~~~~~~~----~ 149 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFA-VSSKDGQIIVLKVNHYQQESE----V 149 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEEEEEEEETTE----E
T ss_pred CCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEEeccccCCce----e
Confidence 445555554 45688888754 21 1122324556789999998655555 44455677766662 321 1
Q ss_pred EEEe----------C--CcCCceeEEEEc-CCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCccccc
Q psy13635 110 NVIT----------N--GLITPDGLAIDW-LTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVE 176 (357)
Q Consensus 110 ~~~~----------~--~~~~p~glavd~-~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~ 176 (357)
.... . .-..+..++.-+ ..+.++++-...+.|...++............ ..-.
T Consensus 150 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------------~h~~ 215 (437)
T 3gre_A 150 KFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS--------------PRHG 215 (437)
T ss_dssp EEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC--------------GGGC
T ss_pred eccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC--------------CCCC
Confidence 1110 0 111223333111 24556666667889999998665443332210 0113
Q ss_pred CCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceE-EEecCCCCCceEEEEeCC---CCEEEEEeCCCCCCeEEEEecCC
Q psy13635 177 HPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRK-VLVNTDLVEPRAITLSPA---HGYLFWSDWNEKRPKIERSLLNG 252 (357)
Q Consensus 177 ~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~-~~~~~~~~~P~giavd~~---~g~Ly~~d~~~~~~~I~~~~~dg 252 (357)
....+++++.+..|. +....+.|...++...... .+..........+++.|. ++.+.++-... +.|...++..
T Consensus 216 ~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d--g~i~iwd~~~ 292 (437)
T 3gre_A 216 AVSSICIDEECCVLI-LGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK--TFLTIWNFVK 292 (437)
T ss_dssp CEEEEEECTTSCEEE-EEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT--EEEEEEETTT
T ss_pred ceEEEEECCCCCEEE-EEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC--CcEEEEEcCC
Confidence 567888887654444 5555678888888754332 222122234567766542 35455554442 5788888765
Q ss_pred CceEEEeeCC--------------------------CCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC
Q psy13635 253 GERVLLVKDR--------------------------LGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN 297 (357)
Q Consensus 253 ~~~~~~~~~~--------------------------l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~ 297 (357)
......+... ......++++ ++.++++-...+.|...++....
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCGG
T ss_pred CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEECCCcc
Confidence 4433332211 1113567776 45667777777899999985443
No 281
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.54 E-value=0.48 Score=43.67 Aligned_cols=237 Identities=11% Similarity=0.009 Sum_probs=138.9
Q ss_pred EeecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE
Q psy13635 34 ALSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI 112 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 112 (357)
|++-++...+|+.+. ...|+..|+.................+++++ +.+..+...++.+...+..... .....+
T Consensus 152 sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~--~~~~~~ 226 (420)
T 4gga_A 152 SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAE--HHVATL 226 (420)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSS--CEEEEE
T ss_pred EEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC---CCEEEEEeCCCceeEeeecccc--eeeEEe
Confidence 344445556666555 4568889987644444444445556666665 3455555566777777766543 223344
Q ss_pred eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceE---EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 113 TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK---VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 113 ~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~---~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
........++.+.+.+ ....+-...+.|...+....... .... .........+++.+..+.
T Consensus 227 ~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~---------------~~~~~~V~~~~~~p~~~~ 290 (420)
T 4gga_A 227 SGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTF---------------TQHQGAVKAVAWCPWQSN 290 (420)
T ss_dssp ECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEE---------------CCCSSCEEEEEECTTCTT
T ss_pred cccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeee---------------cccCCceeeeeeCCCccc
Confidence 4455567788888644 44455555677777766432210 0000 011123456777777777
Q ss_pred EEEEeC--CCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCce
Q psy13635 190 LYWTDT--GTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPN 267 (357)
Q Consensus 190 lY~td~--~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~ 267 (357)
++.+-. ..+.|...+........... ....+..+++.+..+.++.+..... +.|...+.........+...-....
T Consensus 291 ~la~~~gs~D~~I~iwd~~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d-~~I~iwd~~~~~~v~~l~gH~~~V~ 368 (420)
T 4gga_A 291 VLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQ-NQLVIWKYPTMAKVAELKGHTSRVL 368 (420)
T ss_dssp EEEEEECTTTCEEEEEETTTTEEEEEEE-CSSCEEEEEEETTTTEEEEEECTTT-CCEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEEeecCCCEEEEEeCCccccceeec-cccceeeeeecCCCCeEEEEEecCC-CEEEEEECCCCcEEEEEcCCCCCEE
Confidence 766543 34578888877554433333 2356788899988888877764332 5788888765555444444445678
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCC
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFD 294 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~d 294 (357)
++++.+++.. .++-...+.|..-++.
T Consensus 369 ~l~~spdg~~-l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 369 SLTMSPDGAT-VASAAADETLRLWRCF 394 (420)
T ss_dssp EEEECTTSSC-EEEEETTTEEEEECCS
T ss_pred EEEEcCCCCE-EEEEecCCeEEEEECC
Confidence 9999865444 4555556677666653
No 282
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.43 Score=42.49 Aligned_cols=244 Identities=9% Similarity=0.038 Sum_probs=126.2
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC--CcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN--GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~--~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
....++++++. +..+-..++.|+..++..... .....+.. .-.....+++.+. +.+..+-...+.|...+...
T Consensus 15 ~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~-~~~~~~~~~~h~~~v~~v~~sp~-~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 15 EKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDF-TLIDVLDETAHKKAIRSVAWRPH-TSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp SCEEEEEEETT---EEEEEESSSCEEEEECSSSCC-EEEEEECTTCCCSCEEEEEECTT-SSEEEEEETTSCEEEEEC--
T ss_pred CceeeeccCCC---EEEEEcCCCEEEEEEecCCCe-EEEEEEecCCccCCEEEEEECCC-CCEEEEEeCCCcEEEEEccc
Confidence 35677788753 555656667788877765421 11223322 2345778999975 45555666678888887743
Q ss_pred Cc-----eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcC-C-Cc--eEEEecCCCC
Q psy13635 149 KK-----RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLE-G-TH--RKVLVNTDLV 219 (357)
Q Consensus 149 ~~-----~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~-g-~~--~~~~~~~~~~ 219 (357)
.. .+.+..- ..--....++++.+.+. .+.+-...+.|...+++ + .. ..........
T Consensus 90 ~~~~~~~~~~~~~~--------------~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 90 SADRTFEMDLLAII--------------EGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp -----CCCEEEEEE--------------C----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred CcCccccceeEEEE--------------cCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 21 0111000 01112456788887554 44555556788888874 2 21 1122333345
Q ss_pred CceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCc--eEEEeeCCCCCceEEEEecCC-CEEEEEeCCCCeEEEEeCCCC
Q psy13635 220 EPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGE--RVLLVKDRLGWPNGITLDVDN-EKLYWCDAKTDKIEMIDFDGN 296 (357)
Q Consensus 220 ~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~--~~~~~~~~l~~P~giaid~~~-~~lY~~d~~~~~I~~~~~dG~ 296 (357)
....++++|....|.-+... +.|...+..... ....+...-.....+++++.+ +....+-...+.|...++.+.
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D---~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYD---DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp CEEEEEECSSSSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCC---CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 67899999875555555444 355444443321 222232333456788887653 334444445566666655321
Q ss_pred --------CeEEEecC-CCCceEEEEEECCEEEEEeCCCCeEEEEeCccC
Q psy13635 297 --------NRRELINE-NLPHVFGISLLGDYVYWTDWQRRSIDRVNKITG 337 (357)
Q Consensus 297 --------~~~~i~~~-~~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g 337 (357)
.....+.. .......+++..+.++.+-...+.|...+..++
T Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 232 DEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp CTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETT
T ss_pred CccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCC
Confidence 01111111 223446666654444455555667766665444
No 283
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.42 E-value=0.49 Score=42.39 Aligned_cols=241 Identities=10% Similarity=0.000 Sum_probs=126.8
Q ss_pred EeecCCCCeEEEEEe-CCcEEEEEcCCCCc--ceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEE
Q psy13635 34 ALSHHVAAQMLLFAT-SKDIRIANLSRPLK--PVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHN 110 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~--~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~ 110 (357)
+++-++...+|+.+. ...++..++..... ............++++.+.+..| .+-..++.|+..+++.........
T Consensus 66 ~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~ 144 (345)
T 3fm0_A 66 KVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL-ATCSRDKSVWVWEVDEEDEYECVS 144 (345)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEE-EEEECCCeEEEEECCCCCCeEEEE
Confidence 344444555666555 45677777755221 12223345568899999865544 455556778888876543111123
Q ss_pred EEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEE-EecCCCCcceeeeeccCcccccCCceEEEeCCCCe
Q psy13635 111 VITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVL-YWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARN 189 (357)
Q Consensus 111 ~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~-~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~ 189 (357)
.+.........+++.+.+. ++.+-...+.|...+......... ...+ --....++++++.+..
T Consensus 145 ~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~---------------h~~~v~~l~~sp~g~~ 208 (345)
T 3fm0_A 145 VLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEG---------------HESTVWSLAFDPSGQR 208 (345)
T ss_dssp EECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECC---------------CSSCEEEEEECTTSSE
T ss_pred EecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecC---------------CCCceEEEEECCCCCE
Confidence 3333445577889987555 444555567788777654432211 1111 1124678889876555
Q ss_pred EEEEeCCCCeEEEEEc--CCCce--------------EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 190 LYWTDTGTDRIEVCRL--EGTHR--------------KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 190 lY~td~~~~~I~~~~~--~g~~~--------------~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
|. +....+.|..-+. .+... ..+..........+++++..+.|..+... +.|...+.+..
T Consensus 209 l~-s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~~i~vw~~~~~ 284 (345)
T 3fm0_A 209 LA-SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGD---DAIRVFQEDPN 284 (345)
T ss_dssp EE-EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETT---SCEEEEEECTT
T ss_pred EE-EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCC---CeEEEEEeCCC
Confidence 54 4444555555442 22110 01111122346788888876666555544 34555544332
Q ss_pred c-----eEEE----eeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 254 E-----RVLL----VKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 254 ~-----~~~~----~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
. ...+ ........+++++.+.+..++.+-...+.|..-+...
T Consensus 285 ~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 285 SDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp SCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred CCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 1 0111 1112334578888765555666655566666665543
No 284
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.28 E-value=0.5 Score=41.05 Aligned_cols=269 Identities=7% Similarity=0.012 Sum_probs=149.7
Q ss_pred eEEEEEeCCcEEEEEcCCCCcceEec--cCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCc
Q psy13635 42 QMLLFATSKDIRIANLSRPLKPVTII--KDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITP 119 (357)
Q Consensus 42 ~~l~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p 119 (357)
..|..+.++.|+..|+..+....... .......++++.+.++.| .+...++.|...++.... ........-...
T Consensus 37 ~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l-~sgs~Dg~v~iw~~~~~~---~~~~~~~h~~~~ 112 (318)
T 4ggc_A 37 NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQQK---RLRNMTSHSARV 112 (318)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEE-EEEETTSEEEEEETTTTE---EEEEEECCSSCE
T ss_pred CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEE-EEEECCCcEEEeecCCce---eEEEecCccceE
Confidence 36666677889999987643333222 233457899999866554 455567788888887663 222333222233
Q ss_pred eeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCe
Q psy13635 120 DGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDR 199 (357)
Q Consensus 120 ~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~ 199 (357)
. ++.+.+. +..+....+.+................+ .......+++.+.+ ...++....+.
T Consensus 113 ~--~~~~~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~-~~l~s~~~d~~ 173 (318)
T 4ggc_A 113 G--SLSWNSY-ILSSGSRSGHIHHHDVRVAEHHVATLSG---------------HSQEVCGLRWAPDG-RHLASGGNDNL 173 (318)
T ss_dssp E--EEEEETT-EEEEEETTSEEEEEETTSSSCEEEEEEC---------------CSSCEEEEEECTTS-SEEEEEETTSC
T ss_pred E--EeecCCC-EEEEEecCCceEeeecCCCceeEEEEcC---------------ccCceEEEEEcCCC-CEEEEEecCcc
Confidence 3 3333233 4445555666666665544333222111 11234455666444 44445555677
Q ss_pred EEEEEcCCCc-e---EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEEecCC
Q psy13635 200 IEVCRLEGTH-R---KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITLDVDN 275 (357)
Q Consensus 200 I~~~~~~g~~-~---~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~ 275 (357)
|...+..... . .............++..+..+.+.....+...+.|...+........... .......+.+.+..
T Consensus 174 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 252 (318)
T 4ggc_A 174 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHY 252 (318)
T ss_dssp EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTT
T ss_pred eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccc
Confidence 8877765321 1 11122223345677887776666554443323567666666554444332 33456777888778
Q ss_pred CEEEEEe-CCCCeEEEEeCCCCCeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 276 EKLYWCD-AKTDKIEMIDFDGNNRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 276 ~~lY~~d-~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
+.++.+. ...+.|...+.........+.........+++. ++.+.+|-...+.|..-+.
T Consensus 253 ~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 253 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred cceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 8877665 356788888876544433444444556778876 3555555555566654443
No 285
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.27 E-value=1.1 Score=45.06 Aligned_cols=198 Identities=10% Similarity=0.055 Sum_probs=111.3
Q ss_pred cEEEEEEE-ccCCEEEEEeCCCC----eEEEEEcCCC-CcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCC----CEE
Q psy13635 72 EGAAIDYY-YKKSMVCWTDHGTE----MISCCTFDGN-NVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSET----NKL 141 (357)
Q Consensus 72 ~~~~i~~d-~~~~~ly~~d~~~~----~I~~~~~~g~-~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~----~~I 141 (357)
...+..++ +++..|.|+....+ .|+..++++. ... ...+.. ...+++..+.++.||++.... .+|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI--ADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC--CCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC--CccccC---ceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 45677889 88887876644332 4999999876 411 001111 124677777777888875431 378
Q ss_pred EEEEcCCCce--EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC--CCeEEEEEcCCC--ce--EEE
Q psy13635 142 EVSSLDGKKR--KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG--TDRIEVCRLEGT--HR--KVL 213 (357)
Q Consensus 142 ~~~~~~g~~~--~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~--~~~I~~~~~~g~--~~--~~~ 213 (357)
++.++++... ..+.... . .. .-.++++.+.++.|+++... ...|+.+++++. .. +.+
T Consensus 250 ~~~~lgt~~~~~~lv~~~~-~------------~~--~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l 314 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEH-N------------PL--FSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIV 314 (751)
T ss_dssp EEEETTSCGGGCEEEEECC-C------------TT--CEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEES
T ss_pred EEEECCCCchhcEEEEecC-C------------Cc--eEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEe
Confidence 8888876532 2332211 0 00 12345677777788776533 347888888764 22 333
Q ss_pred ecCCCCCc-eEEEEeCCCCEEEEEeCCC--CCCeEEEEecCC-CceEE-EeeCCCC-CceEEEEecCCCEEEEEeCC--C
Q psy13635 214 VNTDLVEP-RAITLSPAHGYLFWSDWNE--KRPKIERSLLNG-GERVL-LVKDRLG-WPNGITLDVDNEKLYWCDAK--T 285 (357)
Q Consensus 214 ~~~~~~~P-~giavd~~~g~Ly~~d~~~--~~~~I~~~~~dg-~~~~~-~~~~~l~-~P~giaid~~~~~lY~~d~~--~ 285 (357)
.... ..+ ..+.. ..++.||+..... .+.+|++++.++ ...+. ++..... ...++++ .++.|+++... .
T Consensus 315 ~~~~-~~~~~s~~~-~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~ 390 (751)
T 2xe4_A 315 RPRE-KGVRYDVQM-HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGL 390 (751)
T ss_dssp SCCC-TTCCEEEEE-ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTE
T ss_pred ecCC-CCceEEEee-eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCE
Confidence 3222 222 23322 2367777765432 247999999885 33233 4433211 2245555 57888877643 3
Q ss_pred CeEEEEeC
Q psy13635 286 DKIEMIDF 293 (357)
Q Consensus 286 ~~I~~~~~ 293 (357)
.+++.+++
T Consensus 391 ~~l~~~dl 398 (751)
T 2xe4_A 391 TRIWTMMA 398 (751)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 46788885
No 286
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.12 E-value=0.62 Score=40.64 Aligned_cols=245 Identities=8% Similarity=0.026 Sum_probs=131.8
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC-CCeEEEEeCCCCEEEEEEcCC
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL-TEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~-~~~ly~td~~~~~I~~~~~~g 148 (357)
......++|++.+..| .+-..++.|+..++++... .....+...-....++++.+. .+.++.+-+..+.|...++..
T Consensus 9 ~~~V~~~~~s~~g~~l-as~s~D~~v~iw~~~~~~~-~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRM-ATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SSCEEEEEECTTSSEE-EEEETTSCEEEEEBCSSCB-CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred cCceEEEEECCCCCEE-EEEeCCCEEEEEecCCCCc-EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 3456788898865554 4555667788878765321 112233333345667787543 366777777789999988865
Q ss_pred Cce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCC-CeEEEEeCCCCeEEEEEcCCCc--eEEEecCCCCCceEE
Q psy13635 149 KKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA-RNLYWTDTGTDRIEVCRLEGTH--RKVLVNTDLVEPRAI 224 (357)
Q Consensus 149 ~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~-~~lY~td~~~~~I~~~~~~g~~--~~~~~~~~~~~P~gi 224 (357)
... ......+ .-.....+++.+.. +.++.+-...+.|...++.... ..............+
T Consensus 87 ~~~~~~~~~~~---------------h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 87 GRWSQIAVHAV---------------HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (297)
T ss_dssp SCBCCCEEECC---------------CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEE
T ss_pred CceEEEEEeec---------------CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceE
Confidence 421 1111110 01235667777642 4555566666788888876432 122222333456778
Q ss_pred EEeCCC------------CEEEEEeCCCCCCeEEEEecCCCc----eEEEeeCCCCCceEEEEecCC--CEEEEEeCCCC
Q psy13635 225 TLSPAH------------GYLFWSDWNEKRPKIERSLLNGGE----RVLLVKDRLGWPNGITLDVDN--EKLYWCDAKTD 286 (357)
Q Consensus 225 avd~~~------------g~Ly~~d~~~~~~~I~~~~~dg~~----~~~~~~~~l~~P~giaid~~~--~~lY~~d~~~~ 286 (357)
+++|.. +.++.+-... +.|...+++... ....+...-....++++.+.. +.++.+-...+
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~~l~sgs~D--~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESRKFVTGGAD--NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp EECCCC------------CCEEEEEETT--SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred eecCCcccccccCCCCCCcceEEEEcCC--CcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 888752 3344443332 355555554332 111222333456889998653 46666666677
Q ss_pred eEEEEeCCCCC---eEEEec-CC-CCceEEEEEE-CCEEEEEeCCCCeEEEEe
Q psy13635 287 KIEMIDFDGNN---RRELIN-EN-LPHVFGISLL-GDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 287 ~I~~~~~dG~~---~~~i~~-~~-~~~p~gia~~-~~~ly~td~~~~~I~~~~ 333 (357)
.|...+.+... ...++. .. -.....+++. .+.+..+-...+.|...+
T Consensus 230 ~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 230 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 78777765432 223331 11 2234566765 344445444556655443
No 287
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.07 E-value=0.65 Score=40.50 Aligned_cols=235 Identities=8% Similarity=-0.006 Sum_probs=126.6
Q ss_pred CCCCeEEEEEe-CCcEEEEEcCCC--CcceEeccCCCcEEEEEEEcc-CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe
Q psy13635 38 HVAAQMLLFAT-SKDIRIANLSRP--LKPVTIIKDLEEGAAIDYYYK-KSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 38 ~~~~~~l~~~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~i~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
++...+|+-+. ...|+..++.+. .....+...-....+++|.+. .+.+..+-..++.|+..++..... .......
T Consensus 18 s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~-~~~~~~~ 96 (297)
T 2pm7_B 18 DYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW-SQIAVHA 96 (297)
T ss_dssp CTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB-CCCEEEC
T ss_pred CCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce-EEEEEee
Confidence 33444555444 556888888652 222333344556788999753 356666766778888888875421 0122222
Q ss_pred CCcCCceeEEEEcCC-CeEEEEeCCCCEEEEEEcCCCc-e-EEEEecCCCCcceeeeeccCcccccCCceEEEeCC----
Q psy13635 114 NGLITPDGLAIDWLT-EKLYWTDSETNKLEVSSLDGKK-R-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV---- 186 (357)
Q Consensus 114 ~~~~~p~glavd~~~-~~ly~td~~~~~I~~~~~~g~~-~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~---- 186 (357)
..-.....+++.+.. +.++.+-...+.|...++.... . ....... ......+++.+.
T Consensus 97 ~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h----------------~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 97 VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEE 160 (297)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC----------------SSCEEEEEECCCC---
T ss_pred cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc----------------cCccceEeecCCcccc
Confidence 233456788888652 5566666678889988876432 1 1111111 012334444443
Q ss_pred --------CCeEEEEeCCCCeEEEEEcCCCc----eEEEecCCCCCceEEEEeCCC--CEEEEEeCCCCCCeEEEEecCC
Q psy13635 187 --------ARNLYWTDTGTDRIEVCRLEGTH----RKVLVNTDLVEPRAITLSPAH--GYLFWSDWNEKRPKIERSLLNG 252 (357)
Q Consensus 187 --------~~~lY~td~~~~~I~~~~~~g~~----~~~~~~~~~~~P~giavd~~~--g~Ly~~d~~~~~~~I~~~~~dg 252 (357)
.++++++-...+.|...+.+... .............+++++|.. +.+..+-... +.|...+++.
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D--~~v~iWd~~~ 238 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD--RTCIIWTQDN 238 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT--SCEEEEEESS
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC--CcEEEEEeCC
Confidence 24566666666777777765432 112222334567899999864 4555554442 4566556554
Q ss_pred Cc---eEEEee-CC-CCCceEEEEecCCCEEEEEeCCCCeEEEEe
Q psy13635 253 GE---RVLLVK-DR-LGWPNGITLDVDNEKLYWCDAKTDKIEMID 292 (357)
Q Consensus 253 ~~---~~~~~~-~~-l~~P~giaid~~~~~lY~~d~~~~~I~~~~ 292 (357)
.. ...++. .. -.....+++.+.+..|..+. ..+.|...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~-~D~~v~lw~ 282 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG-GDNKVTLWK 282 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE-TTSCEEEEE
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCEEEEEc-CCCcEEEEE
Confidence 22 222321 11 23346788886555554443 344444443
No 288
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.97 E-value=0.95 Score=41.50 Aligned_cols=299 Identities=16% Similarity=0.012 Sum_probs=152.3
Q ss_pred eEEEEEeCCcEEEEEcCC-CCcceEe--ccCCCcEEEEEEEc-cCCEEEEEeCCC---CeEEEEEcCCCCcceeEEEEeC
Q psy13635 42 QMLLFATSKDIRIANLSR-PLKPVTI--IKDLEEGAAIDYYY-KKSMVCWTDHGT---EMISCCTFDGNNVGSKHNVITN 114 (357)
Q Consensus 42 ~~l~~~~~~~i~~~~~~~-~~~~~~~--~~~~~~~~~i~~d~-~~~~ly~~d~~~---~~I~~~~~~g~~~~~~~~~~~~ 114 (357)
..|++.....+.+.+-+. ....+.. ........+|.+|+ ..+.||..-... ..|++..-.|.. .+.+..
T Consensus 23 g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~t----W~~~~~ 98 (394)
T 3b7f_A 23 VMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGN----WTEATR 98 (394)
T ss_dssp CEEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSC----CEECSB
T ss_pred CEEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCC----ceECCc
Confidence 356666666676665432 2334432 12334688999998 356777664321 167775444432 332221
Q ss_pred C--c------------CCceeEEEEcC--CCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccC---cccc
Q psy13635 115 G--L------------ITPDGLAIDWL--TEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLP---TIEV 175 (357)
Q Consensus 115 ~--~------------~~p~glavd~~--~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~---~~~~ 175 (357)
. + ....+|++|+. .+.||.... .+.|.+.+-.|..=+.+... ...|.......-+ ....
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-~ggl~~S~DgG~tW~~~~~~-~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-PQGLFRSTDHGASWEPVAGF-NDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-TTEEEEESSTTSBCEECHHH-HTCTTHHHHHCCC----CCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-CCcEEEEcCCCCCeEECcCc-cCCccccccccccccCCCCC
Confidence 1 1 12346888864 577877542 45677765555433332110 0001000000000 0000
Q ss_pred cCCceEEEeCC-CCeEEEEeCCCCeEEEEEcCCCceEEEecCC----C--------CCceEEEEeCCC-CEEEEEeCCCC
Q psy13635 176 EHPDGVAVDWV-ARNLYWTDTGTDRIEVCRLEGTHRKVLVNTD----L--------VEPRAITLSPAH-GYLFWSDWNEK 241 (357)
Q Consensus 176 ~~p~glavD~~-~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~----~--------~~P~giavd~~~-g~Ly~~d~~~~ 241 (357)
.....|++|+. .+.||+.... +.|++.+-.|..-+.+.... + .....|++++.+ +.||+...
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--- 252 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--- 252 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET---
T ss_pred CceeEEEECCCCCCEEEEEECC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC---
Confidence 12247888875 4678887543 35777765555433332110 0 235789999853 78888753
Q ss_pred CCeEEEEecCCCceEEEeeCCCC-----CceEEEEec-CCCEEEEEeC------------CCCeEEEEeCCCCCeEEEec
Q psy13635 242 RPKIERSLLNGGERVLLVKDRLG-----WPNGITLDV-DNEKLYWCDA------------KTDKIEMIDFDGNNRRELIN 303 (357)
Q Consensus 242 ~~~I~~~~~dg~~~~~~~~~~l~-----~P~giaid~-~~~~lY~~d~------------~~~~I~~~~~dG~~~~~i~~ 303 (357)
..|++..-.|..-+.+ ...+. ....|++|+ ..+.||+.-. ....|++..-.|..-+.+.
T Consensus 253 -~gl~~s~D~G~tW~~~-~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~- 329 (394)
T 3b7f_A 253 -CGIYRMDRREGVWKRI-GDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQD- 329 (394)
T ss_dssp -TEEEEEETTTTEEECG-GGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEEC-
T ss_pred -CeEEEeCCCCCcceEC-CCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECC-
Confidence 3688776545433322 22222 234677775 3567887631 1235665543344333332
Q ss_pred CCCCce--------EEEEEE---CCEEEEEeCCCCeEEEEeCccCceeEEEecccCCceeeee
Q psy13635 304 ENLPHV--------FGISLL---GDYVYWTDWQRRSIDRVNKITGNDREVIIERSCTGVTRRR 355 (357)
Q Consensus 304 ~~~~~p--------~gia~~---~~~ly~td~~~~~I~~~~~~~g~~~~~i~~~l~~p~~i~~ 355 (357)
..+..+ .+++++ .+.||+.. ..+.|++-.- .|+.-+.+..++.....+.+
T Consensus 330 ~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~-~~g~l~~S~D-~G~tW~~~~~~lp~~~~v~~ 390 (394)
T 3b7f_A 330 RGLPTDQAWLTVKRQAMTADAHAPVGVYFGT-TGGEIWASAD-EGEHWQCIASHLPHIYAVQS 390 (394)
T ss_dssp BTSCCSSCCCCCCTBSEEECCSSSCCEEEEC-TTSCEEEESS-TTSBCEEEECSCSCEEEEEE
T ss_pred CCCCCccccceEEEEEEEECCCCCCEEEEEe-CCCeEEEECC-CCCCceEcccCCCCeeEEEE
Confidence 223221 346665 25688753 3456765543 68888888888776655544
No 289
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.81 E-value=0.95 Score=40.27 Aligned_cols=159 Identities=6% Similarity=0.003 Sum_probs=94.6
Q ss_pred CCceeEEEEc-CCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeC
Q psy13635 117 ITPDGLAIDW-LTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDT 195 (357)
Q Consensus 117 ~~p~glavd~-~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~ 195 (357)
.....+++++ ..+.++++-...+.|...++.......+.... .-.....+++.+ .+.++.+..
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~---------------~~~~i~~~~~~p-dg~~lasg~ 189 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK---------------SDVEYSSGVLHK-DSLLLALYS 189 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC---------------SSCCCCEEEECT-TSCEEEEEC
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC---------------CCCceEEEEECC-CCCEEEEEc
Confidence 3467788886 14555666667889999998766553332111 112467888886 456666666
Q ss_pred CCCeEEEEEcCCCceE-EEecC-CCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC--CCCCc---eE
Q psy13635 196 GTDRIEVCRLEGTHRK-VLVNT-DLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD--RLGWP---NG 268 (357)
Q Consensus 196 ~~~~I~~~~~~g~~~~-~~~~~-~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~--~l~~P---~g 268 (357)
..+.|...+....... ..... .......++++|.+..|..+. . ..|...++........+.. .-..+ ..
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D---QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S---SBEEEEETTSSTTCBSSCCCBC-----CCEE
T ss_pred CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C---CeEEEEEcCCCCcceeecccccccccccceE
Confidence 7788999998755433 23332 345678999998766666665 3 2677777664432111110 00011 35
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 269 ITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 269 iaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
+++++.+..|..+..+.+.|...+.+.
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 999977666666555466777776643
No 290
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.79 E-value=0.15 Score=49.87 Aligned_cols=111 Identities=16% Similarity=0.168 Sum_probs=75.5
Q ss_pred cccccCCceEEEeCCCCeEEEEeCCC---------------------CeEEEEEcCCCce-------EEEe-c-------
Q psy13635 172 TIEVEHPDGVAVDWVARNLYWTDTGT---------------------DRIEVCRLEGTHR-------KVLV-N------- 215 (357)
Q Consensus 172 ~~~~~~p~glavD~~~~~lY~td~~~---------------------~~I~~~~~~g~~~-------~~~~-~------- 215 (357)
...+..|+|+++++.++.+|++..+. +.|++..+++... ..++ .
T Consensus 380 AT~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~ 459 (592)
T 3zwu_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHA 459 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTST
T ss_pred eEEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccc
Confidence 45788999999999999999996642 4688887654321 1111 0
Q ss_pred -------------CCCCCceEEEEeCCCCEEEEEeCCCC----------CCeEEEEecCCCceEEEee-CCCCCceEEEE
Q psy13635 216 -------------TDLVEPRAITLSPAHGYLFWSDWNEK----------RPKIERSLLNGGERVLLVK-DRLGWPNGITL 271 (357)
Q Consensus 216 -------------~~~~~P~giavd~~~g~Ly~~d~~~~----------~~~I~~~~~dg~~~~~~~~-~~l~~P~giai 271 (357)
..+..|-.|++|+. |+||+++-+.. +..++..+........++. ..-....|+++
T Consensus 460 ~~~~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~f 538 (592)
T 3zwu_A 460 GTPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISF 538 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEE
T ss_pred ccccccccccCCCCCccCCcceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeE
Confidence 12678999999985 78888865421 2466777766444444433 23456789999
Q ss_pred ecCCCEEEEEeC
Q psy13635 272 DVDNEKLYWCDA 283 (357)
Q Consensus 272 d~~~~~lY~~d~ 283 (357)
.++...||+.-+
T Consensus 539 spDg~tlfvniQ 550 (592)
T 3zwu_A 539 SPDQKTLFVGIQ 550 (592)
T ss_dssp CTTSSEEEEEEE
T ss_pred CCCCCEEEEEEE
Confidence 988888888754
No 291
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.73 E-value=0.98 Score=39.78 Aligned_cols=236 Identities=6% Similarity=-0.056 Sum_probs=119.4
Q ss_pred CCeEEEEEe-CCcEEEEEcCCCCc--ceEeccCCCcEEEEEEEcc-CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC
Q psy13635 40 AAQMLLFAT-SKDIRIANLSRPLK--PVTIIKDLEEGAAIDYYYK-KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 40 ~~~~l~~~~-~~~i~~~~~~~~~~--~~~~~~~~~~~~~i~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
...+|+-+. ...|+..|+..+.. ............++++.+. ++.+..+-..++.|...++..... .....+...
T Consensus 24 ~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~-~~~~~~~~h 102 (316)
T 3bg1_A 24 YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW-EKSHEHAGH 102 (316)
T ss_dssp GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC-CEEEEECCC
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc-eEEEEccCC
Confidence 334444444 45688888765321 1122334556788999653 355666666677888877765421 112223333
Q ss_pred cCCceeEEEEcCC-CeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCC--------
Q psy13635 116 LITPDGLAIDWLT-EKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWV-------- 186 (357)
Q Consensus 116 ~~~p~glavd~~~-~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~-------- 186 (357)
-.....+++.+.. +.++.+-...+.|...++.+............. ......+++.+.
T Consensus 103 ~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 103 DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH-------------TIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS-------------SSCBCCCEECCCCCC-----
T ss_pred CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc-------------cCCcceEEEccccCCccccc
Confidence 3467889998753 566777777888888887654221110000000 011222333322
Q ss_pred --------CCeEEEEeCCCCeEEEEEcCCCc---eEEEecCCCCCceEEEEeCCC---CEEEEEeCCCCCCeEEEEecCC
Q psy13635 187 --------ARNLYWTDTGTDRIEVCRLEGTH---RKVLVNTDLVEPRAITLSPAH---GYLFWSDWNEKRPKIERSLLNG 252 (357)
Q Consensus 187 --------~~~lY~td~~~~~I~~~~~~g~~---~~~~~~~~~~~P~giavd~~~---g~Ly~~d~~~~~~~I~~~~~dg 252 (357)
.+.++.+-...+.|..-+..... .............+++++|.. +.+..+-... +.|...+++.
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D--~~v~iw~~~~ 247 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD--GRVFIWTCDD 247 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT--CEEEEEECSS
T ss_pred cccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC--CeEEEEEccC
Confidence 13455555555666666665331 111122233456889998864 1333443332 4676666654
Q ss_pred Cc----eEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEe
Q psy13635 253 GE----RVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMID 292 (357)
Q Consensus 253 ~~----~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~ 292 (357)
.. ....+...-.....+++.+.+..|..+ ...+.|...+
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~-~~D~~v~lw~ 290 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVS-GGDNKVTLWK 290 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE-ESSSCEEEEE
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE-cCCCeEEEEE
Confidence 11 111222222345788887655444433 3344554444
No 292
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.65 E-value=0.19 Score=49.13 Aligned_cols=124 Identities=16% Similarity=0.201 Sum_probs=76.1
Q ss_pred CcCCceeEEEEcCCCeEEEEeCC---------------------CCEEEEEEcCCCce-------EEEEecCCC---Ccc
Q psy13635 115 GLITPDGLAIDWLTEKLYWTDSE---------------------TNKLEVSSLDGKKR-------KVLYWEDID---QPR 163 (357)
Q Consensus 115 ~~~~p~glavd~~~~~ly~td~~---------------------~~~I~~~~~~g~~~-------~~~~~~~~~---~p~ 163 (357)
.+..|+++++++.++.+|++-.+ .++|.++..++... +.++..+.. ...
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 46789999999999999998653 26788887654321 122211100 000
Q ss_pred eeeee-c-cCcccccCCceEEEeCCCCeEEEEeCC------------CCeEEEEEcC-CCceEEEecCCCCCceEEEEeC
Q psy13635 164 AIASY-K-LPTIEVEHPDGVAVDWVARNLYWTDTG------------TDRIEVCRLE-GTHRKVLVNTDLVEPRAITLSP 228 (357)
Q Consensus 164 ~i~~~-~-~~~~~~~~p~glavD~~~~~lY~td~~------------~~~I~~~~~~-g~~~~~~~~~~~~~P~giavd~ 228 (357)
..... . .....|..|.+|+||+. |+||+++-+ ++.+...++. |+..+.+....-....|++++|
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp 540 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred ccccccccCCCCCccCCcceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence 00000 0 01345789999999975 567776543 2456677666 4444444333345788999999
Q ss_pred CCCEEEEEeCC
Q psy13635 229 AHGYLFWSDWN 239 (357)
Q Consensus 229 ~~g~Ly~~d~~ 239 (357)
....||+.-..
T Consensus 541 Dg~tlfvniQH 551 (592)
T 3zwu_A 541 DQKTLFVGIQH 551 (592)
T ss_dssp TSSEEEEEEES
T ss_pred CCCEEEEEEEC
Confidence 88899988665
No 293
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.32 E-value=1.5 Score=39.33 Aligned_cols=225 Identities=11% Similarity=0.080 Sum_probs=124.4
Q ss_pred EeecCCCCeEEEEEeCCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe
Q psy13635 34 ALSHHVAAQMLLFATSKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT 113 (357)
Q Consensus 34 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 113 (357)
|++-++...++..+..+.++..+++.. ... ..........+++.+..+.+..+...++.|...+..... ....+.
T Consensus 24 ~v~fs~dg~~la~g~~~~~~iw~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~---~~~~~~ 98 (355)
T 3vu4_A 24 DYEFNQDQSCLILSTLKSFEIYNVHPV-AHI-MSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ---DVSRIK 98 (355)
T ss_dssp EEEECTTSSEEEEECSSEEEEEEETTE-EEE-EEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE---EEEEEE
T ss_pred EEEECCCCCEEEEEcCCEEEEEecCCc-cee-eeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc---EEEEEE
Confidence 334455566777777777888887542 111 112222345567777777787777777788888877653 122222
Q ss_pred CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC-c-eEEEEecCCCCcceeeeeccCcccccCCce-EEEeCCCCeE
Q psy13635 114 NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK-K-RKVLYWEDIDQPRAIASYKLPTIEVEHPDG-VAVDWVARNL 190 (357)
Q Consensus 114 ~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~-~-~~~~~~~~~~~p~~i~~~~~~~~~~~~p~g-lavD~~~~~l 190 (357)
.-....+++++ .+.++++. .++|...++... . ...+. .|.+ +++.+ +.+
T Consensus 99 -~~~~v~~v~~~--~~~~~~~~--~~~i~i~d~~~~~~~~~~~~---------------------~~~~~~~~s~--~~l 150 (355)
T 3vu4_A 99 -VDAPVKDLFLS--REFIVVSY--GDVISVFKFGNPWKRITDDI---------------------RFGGVCEFSN--GLL 150 (355)
T ss_dssp -CSSCEEEEEEC--SSEEEEEE--TTEEEEEESSTTCCBSSCCE---------------------EEEEEEEEET--TEE
T ss_pred -CCCceEEEEEc--CCEEEEEE--cCEEEEEECCCCceeeEEec---------------------cCCceEEEEc--cEE
Confidence 22345666665 44555553 457887777654 1 11110 0212 22332 344
Q ss_pred EEE-eCCCCeEEEEEcCCCc---------------e-EEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCe-EEEEecCC
Q psy13635 191 YWT-DTGTDRIEVCRLEGTH---------------R-KVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPK-IERSLLNG 252 (357)
Q Consensus 191 Y~t-d~~~~~I~~~~~~g~~---------------~-~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~-I~~~~~dg 252 (357)
-++ ....+.|...++.... . .............++++|.+..|.-+... +. |...++..
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d---~~~v~iwd~~~ 227 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD---GTIIRVFKTED 227 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT---CSEEEEEETTT
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC---CCEEEEEECCC
Confidence 443 3445667777766432 0 12223344567899999864444444433 46 88888775
Q ss_pred CceEEEee-C-CCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 253 GERVLLVK-D-RLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 253 ~~~~~~~~-~-~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
......+. . .-....++++++.+..| .+-...+.|...++..
T Consensus 228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l-~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 228 GVLVREFRRGLDRADVVDMKWSTDGSKL-AVVSDKWTLHVFEIFN 271 (355)
T ss_dssp CCEEEEEECTTCCSCEEEEEECTTSCEE-EEEETTCEEEEEESSC
T ss_pred CcEEEEEEcCCCCCcEEEEEECCCCCEE-EEEECCCEEEEEEccC
Confidence 44444443 2 34556899998655544 4445567888888743
No 294
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.25 E-value=1.4 Score=38.66 Aligned_cols=244 Identities=9% Similarity=-0.048 Sum_probs=126.1
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcC-CCeEEEEeCCCCEEEEEEcCCC
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWL-TEKLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~-~~~ly~td~~~~~I~~~~~~g~ 149 (357)
.....++|++.+.. ..+-..++.|+..++..... .....+...-.....+++.+. .++++.+-+..+.|...++...
T Consensus 14 ~~V~~v~~s~~g~~-lasgs~D~~v~lwd~~~~~~-~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 14 DMIHDAQMDYYGTR-LATCSSDRSVKIFDVRNGGQ-ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG 91 (316)
T ss_dssp CCEEEEEECGGGCE-EEEEETTTEEEEEEEETTEE-EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS
T ss_pred CeEEEeeEcCCCCE-EEEEeCCCeEEEEEecCCCc-EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC
Confidence 35678888876554 44555667787777765420 011223333345677888543 3566666667788888887653
Q ss_pred c-eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC-CeEEEEeCCCCeEEEEEcCCCceEEE---ecCCCCCceEE
Q psy13635 150 K-RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA-RNLYWTDTGTDRIEVCRLEGTHRKVL---VNTDLVEPRAI 224 (357)
Q Consensus 150 ~-~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~-~~lY~td~~~~~I~~~~~~g~~~~~~---~~~~~~~P~gi 224 (357)
. .......+ --.....+++.+.. +.++.+....+.|...+..+...... ..........+
T Consensus 92 ~~~~~~~~~~---------------h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (316)
T 3bg1_A 92 TWEKSHEHAG---------------HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAV 156 (316)
T ss_dssp CCCEEEEECC---------------CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCC
T ss_pred cceEEEEccC---------------CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceE
Confidence 2 22211111 11246778887653 56666777777888877765422111 11111223455
Q ss_pred EEeCCC----------------CEEEEEeCCCCCCeEEEEecCCCce---EEEeeCCCCCceEEEEecCC---CEEEEEe
Q psy13635 225 TLSPAH----------------GYLFWSDWNEKRPKIERSLLNGGER---VLLVKDRLGWPNGITLDVDN---EKLYWCD 282 (357)
Q Consensus 225 avd~~~----------------g~Ly~~d~~~~~~~I~~~~~dg~~~---~~~~~~~l~~P~giaid~~~---~~lY~~d 282 (357)
+++|.. +.++.+-... +.|...+...... ...+...-....++++.+.. +.+..+-
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D--~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 157 SWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD--NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp EECCCCCC------CCSCCCCCCCBEECCBTT--SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred EEccccCCccccccccccCccccceEEEecCC--CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEE
Confidence 555531 2333333322 3444444443221 11122223345788887543 2555666
Q ss_pred CCCCeEEEEeCCCC----CeEEEecCCCCceEEEEEE-CCEEEEEeCCCCeEEEEe
Q psy13635 283 AKTDKIEMIDFDGN----NRRELINENLPHVFGISLL-GDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 283 ~~~~~I~~~~~dG~----~~~~i~~~~~~~p~gia~~-~~~ly~td~~~~~I~~~~ 333 (357)
...+.|...+.+.. ....++...-.....+++. .+.+..+-...+.|...+
T Consensus 235 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 235 SQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp ETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred cCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 66778888877541 1111222223345677776 355555544556665444
No 295
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.12 E-value=2.9 Score=41.44 Aligned_cols=256 Identities=11% Similarity=-0.011 Sum_probs=127.5
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC----cCCceeEEEEcCCCeEEEEeCC-----CCEEEEEEcC-CCce
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG----LITPDGLAIDWLTEKLYWTDSE-----TNKLEVSSLD-GKKR 151 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~----~~~p~glavd~~~~~ly~td~~-----~~~I~~~~~~-g~~~ 151 (357)
+++||+.. .++.|+.++..... .....-... ........+. ++.+|+.... .+.|..++.. |+..
T Consensus 117 ~~~v~v~~-~dg~l~alD~~tG~--~~W~~~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 117 GDKVYVGT-LDGRLIALDAKTGK--AIWSQQTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp BTEEEEEC-TTSEEEEEETTTCC--EEEEEECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred CCEEEEEc-CCCEEEEEECCCCC--EeeeeccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 68888875 35688888876443 122222211 1111223444 6788887643 4789999875 4433
Q ss_pred EEEEecCCCCcceeee---ec--cCc----------ccccCCceEEEeCCCCeEEEEeCCC------------------C
Q psy13635 152 KVLYWEDIDQPRAIAS---YK--LPT----------IEVEHPDGVAVDWVARNLYWTDTGT------------------D 198 (357)
Q Consensus 152 ~~~~~~~~~~p~~i~~---~~--~~~----------~~~~~p~glavD~~~~~lY~td~~~------------------~ 198 (357)
=..-... ..|..... +. .+. ..-..-..+++|+..+.+|+..... .
T Consensus 192 W~~~~~~-~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 192 WRFYTVP-GDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp EEEESSC-CCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEecccC-CCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 2221110 11110000 00 000 0000112479999899999875432 1
Q ss_pred eEEEEEcC-CCceEEEecCC-------CCCce-------------EEEEeCCCCEEEEEeCCCCCCeEEEEecCCC----
Q psy13635 199 RIEVCRLE-GTHRKVLVNTD-------LVEPR-------------AITLSPAHGYLFWSDWNEKRPKIERSLLNGG---- 253 (357)
Q Consensus 199 ~I~~~~~~-g~~~~~~~~~~-------~~~P~-------------giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~---- 253 (357)
.|..+|++ |+.+-..-... ...|. -+.+...+|.+|+.|..+. ..+.+......
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~l~~~~~~~~~w~~ 349 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG-KLISAEKFGKVTWAE 349 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC-CEEEEEESSCCCSEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC-CEecccccccccccc
Confidence 48888765 44332221110 11221 1334445678888887643 34433332220
Q ss_pred -----ceEEEee--------------C--CCCCceEEEEecCCCEEEEEeC-----------------------------
Q psy13635 254 -----ERVLLVK--------------D--RLGWPNGITLDVDNEKLYWCDA----------------------------- 283 (357)
Q Consensus 254 -----~~~~~~~--------------~--~l~~P~giaid~~~~~lY~~d~----------------------------- 283 (357)
....+.. . +...-.++++|+..+.+|+...
T Consensus 350 ~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 429 (668)
T 1kv9_A 350 KVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADAT 429 (668)
T ss_dssp EECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCC
T ss_pred ccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccC
Confidence 0001110 0 0112235899999999998421
Q ss_pred ------CCCeEEEEeCCCCCeEEEecCCCC-ceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 284 ------KTDKIEMIDFDGNNRRELINENLP-HVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 284 ------~~~~I~~~~~dG~~~~~i~~~~~~-~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
..+.|..+|+......--...... .--.++..++.+|+.+ ..+.|+.++..+|+.+..+..
T Consensus 430 ~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 430 DVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGT-AAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp CCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEEC
T ss_pred CCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEEC-CcccchhhhhhcChhheEecC
Confidence 115688888754332211111111 1123455578888884 568899999888887766543
No 296
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.53 E-value=2.1 Score=36.95 Aligned_cols=237 Identities=11% Similarity=0.013 Sum_probs=127.9
Q ss_pred EEeecCCCCeEEEEEe-CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEE
Q psy13635 33 YALSHHVAAQMLLFAT-SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNV 111 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~ 111 (357)
.+++-++...+++.+. ...|+..++..................+..+ .. +..+....+.+......... .....
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~~-~l~s~~~~~~~~~~~~~~~~--~~~~~ 145 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAE--HHVAT 145 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSS--CEEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--CC-EEEEEecCCceEeeecCCCc--eeEEE
Confidence 3444455555665555 4568888887643333333333444444443 33 34444445555555555443 22333
Q ss_pred EeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceE---EEEecCCCCcceeeeeccCcccccCCceEEEeCCCC
Q psy13635 112 ITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRK---VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR 188 (357)
Q Consensus 112 ~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~---~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~ 188 (357)
..........+++.+. ++..++-...+.|...++...... .... .........++..+..+
T Consensus 146 ~~~~~~~~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~ 209 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPD-GRHLASGGNDNLVNVWPSAPGEGGWVPLQTF---------------TQHQGAVKAVAWCPWQS 209 (318)
T ss_dssp EECCSSCEEEEEECTT-SSEEEEEETTSCEEEEESSCBTTBSCCSEEE---------------CCCCSCEEEEEECTTST
T ss_pred EcCccCceEEEEEcCC-CCEEEEEecCcceeEEECCCCcccccceeee---------------cccCCceEEEEecCCCC
Confidence 4444455677777754 445556656778888876532210 0000 00111234555555555
Q ss_pred eEEEE--eCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCc
Q psy13635 189 NLYWT--DTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWP 266 (357)
Q Consensus 189 ~lY~t--d~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P 266 (357)
.+... ....+.|...+........... .......+++.+..+.++.+.... .+.|...++........+...-...
T Consensus 210 ~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~-d~~i~iwd~~~~~~~~~l~gH~~~V 287 (318)
T 4ggc_A 210 NVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFA-QNQLVIWKYPTMAKVAELKGHTSRV 287 (318)
T ss_dssp TEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTT-TCCEEEEETTTCCEEEEECCCSSCE
T ss_pred cEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcC-CCEEEEEECCCCcEEEEEcCCCCCE
Confidence 55443 2334567777766554433332 335577888898888887765433 2578888877555544444444556
Q ss_pred eEEEEecCCCEEEEEeCCCCeEEEEeC
Q psy13635 267 NGITLDVDNEKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~~~~I~~~~~ 293 (357)
.++++.+.+.. .++-...+.|..-++
T Consensus 288 ~~l~~spdg~~-l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 288 LSLTMSPDGAT-VASAAADETLRLWRC 313 (318)
T ss_dssp EEEEECTTSSC-EEEEETTTEEEEECC
T ss_pred EEEEEcCCCCE-EEEEecCCeEEEEEC
Confidence 88999864444 444445566665554
No 297
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.53 E-value=4.3 Score=40.61 Aligned_cols=249 Identities=7% Similarity=-0.024 Sum_probs=137.4
Q ss_pred CCeEEEEEeCCcEEEEEcCCCCcceEe--ccC--CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC-
Q psy13635 40 AAQMLLFATSKDIRIANLSRPLKPVTI--IKD--LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN- 114 (357)
Q Consensus 40 ~~~~l~~~~~~~i~~~~~~~~~~~~~~--~~~--~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~- 114 (357)
...+|.++....+.|+|... .... ... ......+..|. ++.||+... +.+++.+..... ......
T Consensus 31 ~~G~lWigT~~GL~ryDG~~---~~~~~~~~~~~~~~i~~i~~d~-~g~lWigT~--~Gl~~yd~~~~~----f~~~~~~ 100 (758)
T 3ott_A 31 SEGLIWIGSNKGLFSYDGYS---TQQHFTYGENNNTRIYCGVIID-NTYLYMGTD--NGILVYNYRADR----YEQPETD 100 (758)
T ss_dssp TTSCEEEEESSCEEEECSSC---EEECSCTTSTTSSCEEEEEEET-TTEEEEEET--TEEEEEETTTTE----ECCCSCC
T ss_pred CCCCEEEEECCCccccCCCc---eEEEEccCCCCCceEEEEEEcC-CCcEEEEeC--CCeEEEeCCCCE----EECcccC
Confidence 55678888888999998532 1111 111 22466676664 688888753 468888875432 111101
Q ss_pred CcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 115 GLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 115 ~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
.......++. ..+.||++... .+.+++......+.+.... .++ .......+..| ..+.||+..
T Consensus 101 ~~~~i~~i~~--~~g~lWigt~~--Gl~~~~~~~~~~~~~~~~~----~~l--------~~~~i~~i~~d-~~g~lWigt 163 (758)
T 3ott_A 101 FPTDVRTMAL--QGDTLWLGALN--GLYTYQLQSRKLTSFDTRR----NGL--------PNNTIYSIIRT-KDNQIYVGT 163 (758)
T ss_dssp CCSCEEEEEE--ETTEEEEEETT--EEEEEETTTCCEEEECHHH----HCC--------SCSCEEEEEEC-TTCCEEEEE
T ss_pred CCceEEEEEe--cCCcEEEEcCC--cceeEeCCCCeEEEeccCC----CCc--------CCCeEEEEEEc-CCCCEEEEe
Confidence 1112334443 36788887643 7888887654433331100 000 01234567778 577888876
Q ss_pred CCCCeEEEEEcCCCceEEEecCC-----CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEE
Q psy13635 195 TGTDRIEVCRLEGTHRKVLVNTD-----LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGI 269 (357)
Q Consensus 195 ~~~~~I~~~~~~g~~~~~~~~~~-----~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~gi 269 (357)
. +-+.+++............. -.....|..|..++.||+...+ .+.+.+...........-.-.....|
T Consensus 164 ~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~----Gl~~~~~~~~~~~~~~~l~~~~i~~i 237 (758)
T 3ott_A 164 Y--NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG----YLFQYFPSTGQIKQTEAFHNNSIKSL 237 (758)
T ss_dssp T--TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE----EEEEEETTTTEEEEEEEEEEEEEEEE
T ss_pred C--CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECC----CCeEEcCCCCeEEeccCCCCCeEEEE
Confidence 4 35888887665443332111 1125678888765677776632 68888876543332211111234677
Q ss_pred EEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecC-----CC--CceEEEEEE-CCEEEEEeC
Q psy13635 270 TLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINE-----NL--PHVFGISLL-GDYVYWTDW 324 (357)
Q Consensus 270 aid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~-----~~--~~p~gia~~-~~~ly~td~ 324 (357)
..| .++.|++.-. +.+.+++.+....+.+... .+ .....|..| +|.|++.-.
T Consensus 238 ~~d-~~g~lWigT~--~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~ 297 (758)
T 3ott_A 238 ALD-GNGDLLAGTD--NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTD 297 (758)
T ss_dssp EEC-TTCCEEEEET--TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEES
T ss_pred EEc-CCCCEEEEeC--CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeC
Confidence 887 6788888763 4688888765544444321 12 134566666 466777543
No 298
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.44 E-value=3.9 Score=39.70 Aligned_cols=98 Identities=11% Similarity=0.058 Sum_probs=52.1
Q ss_pred eEEEEeCCCCEEEEEeCC----------------------------------CCCCeEEEEecC-CCceEEEeeCCCCCc
Q psy13635 222 RAITLSPAHGYLFWSDWN----------------------------------EKRPKIERSLLN-GGERVLLVKDRLGWP 266 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~----------------------------------~~~~~I~~~~~d-g~~~~~~~~~~l~~P 266 (357)
.++++||.++.+|+.... ...+.|..+++. |......-... .+
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~--~~ 466 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF--AA 466 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS--CC
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC--Cc
Confidence 457899999999997531 012466666664 33333222111 11
Q ss_pred eEEEEecCCCEEEEEeCCCCeEEEEeCC-CCCeEEEecCC--CCceEEEEEECCEEEEEe
Q psy13635 267 NGITLDVDNEKLYWCDAKTDKIEMIDFD-GNNRRELINEN--LPHVFGISLLGDYVYWTD 323 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~~~~--~~~p~gia~~~~~ly~td 323 (357)
.+..+...++.+|+.. ..+.++.+|.. |+.+-.+.... ...|.-. ..+|.+|+..
T Consensus 467 ~~~~~~t~gg~v~~g~-~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~-~~~G~~yv~~ 524 (571)
T 2ad6_A 467 WGGTLYTKGGLVWYAT-LDGYLKALDNKDGKELWNFKMPSGGIGSPMTY-SFKGKQYIGS 524 (571)
T ss_dssp CSBCEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEEEE
T ss_pred cceeEEECCCEEEEEc-CCCeEEEEECCCCCEEEEEeCCCCcEeeeEEE-EECCEEEEEE
Confidence 2222222578888864 46788888864 54443332211 2233321 2477888764
No 299
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.25 E-value=2.7 Score=37.19 Aligned_cols=157 Identities=8% Similarity=-0.068 Sum_probs=91.6
Q ss_pred CcEEEEEEEc--cCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEe-CCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcC
Q psy13635 71 EEGAAIDYYY--KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVIT-NGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLD 147 (357)
Q Consensus 71 ~~~~~i~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~ 147 (357)
.....+++++ .++ ++.+-..++.|...++.... ...... ..-.....+++++ .+.++.+-..++.|...++.
T Consensus 126 ~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~---~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDS---QYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp SCEEEEECCC---CC-EEEEEETTCCEEEEESSSSC---EEEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEEESS
T ss_pred CCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCc---EEEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEEEEECC
Confidence 4688899988 544 44555567788888888664 122222 2223577899997 56666666678899999987
Q ss_pred CCceE-EEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecC--CCCCc---
Q psy13635 148 GKKRK-VLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNT--DLVEP--- 221 (357)
Q Consensus 148 g~~~~-~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~--~~~~P--- 221 (357)
..... ..+... --.....+++.+.+..|..+. .+.|...++........+.. .-..+
T Consensus 201 ~~~~~~~~~~~~---------------h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 263 (343)
T 3lrv_A 201 SPDQASSRFPVD---------------EEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTIPEFKTGT 263 (343)
T ss_dssp CTTSCCEECCCC---------------TTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC-----CC
T ss_pred CCCCCccEEecc---------------CCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccccccccccc
Confidence 55432 211110 113567888887666666655 33888888775432111110 00112
Q ss_pred eEEEEeCCCCEEEEEeCCCCCCeEEEEecC
Q psy13635 222 RAITLSPAHGYLFWSDWNEKRPKIERSLLN 251 (357)
Q Consensus 222 ~giavd~~~g~Ly~~d~~~~~~~I~~~~~d 251 (357)
..++++|.+..|..+..+. +.|...+.+
T Consensus 264 ~~~~~~~~g~~l~~~s~~d--~~i~v~~~~ 291 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYSNES--NSLTIYKFD 291 (343)
T ss_dssp EEEEECTTSSEEEEEETTT--TEEEEEEEC
T ss_pred eEEEECCCCCEEEEecCCC--CcEEEEEEc
Confidence 3599998766666654422 355555553
No 300
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.89 E-value=5.2 Score=39.10 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=23.1
Q ss_pred EEEECCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 312 ISLLGDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 312 ia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
++..++.+|+.. ..+.++.+|..+|+.+-..
T Consensus 480 ~~tagg~vf~gt-~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 480 MATAGDLVFYGT-LDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp EEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred eEecCCEEEEEC-CCCeEEEEECCCCCEEEEe
Confidence 555678888864 4578889998888876655
No 301
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=93.46 E-value=7.3 Score=39.41 Aligned_cols=256 Identities=11% Similarity=0.064 Sum_probs=134.3
Q ss_pred CcEEEEEEEccC-CEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc-------CCceeEEEEcCC-CeEEEEeCC-C--
Q psy13635 71 EEGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL-------ITPDGLAIDWLT-EKLYWTDSE-T-- 138 (357)
Q Consensus 71 ~~~~~i~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~-------~~p~glavd~~~-~~ly~td~~-~-- 138 (357)
....+|++++.+ +.+|.. ...+.|+|..-.|.. .+.+.... .....|++|+.. +.+|++-.. .
T Consensus 15 g~i~~i~~~p~~~~~~~a~-~~~ggv~rS~DgG~t----W~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYAR-TDIGGAYRWDAGTSK----WIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD 89 (789)
T ss_dssp SCEEEEEECSSSTTCEEEE-ESSSCEEEEETTTTE----EEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred CcEEEEEECCCCCCEEEEE-ecCCCEEEecCCCCC----eeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCC
Confidence 478889999865 455554 444568877755653 44444322 356789999743 567776432 2
Q ss_pred --CEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCC-eEEEEeCCCCeEEEEEcCCCceEEEec
Q psy13635 139 --NKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVAR-NLYWTDTGTDRIEVCRLEGTHRKVLVN 215 (357)
Q Consensus 139 --~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~-~lY~td~~~~~I~~~~~~g~~~~~~~~ 215 (357)
+.|++..=.|..=+.+. ..+..+.. ...-.....|++|+.+. .+|+ -...+.|++..-.|+.=+.+..
T Consensus 90 ~~~~v~~S~DgG~TW~~~~-~~~~~~~~-------~~~~~~~~~iav~p~~~~~v~~-g~~~~gl~~S~DgG~TW~~~~~ 160 (789)
T 1sqj_A 90 EWAAFYVSEDRGQSFTIYE-SPFPMGAN-------DMGRNNGERLAVNPFNSNEVWM-GTRTEGIWKSSDRAKTWTNVTS 160 (789)
T ss_dssp SCCEEEEESSTTSEEEEEE-CSSCCCTT-------STTTTSCCCEEEETTEEEEEEE-ECSSSCEEEESSTTSSCEEETT
T ss_pred cccEEEEECCCCCcceecc-CCcccCcc-------CCCccceeEEEEcCCCCCEEEE-EeccCCEEEECCCCcccCCCcc
Confidence 56666543443323332 11100000 00001235689998754 4554 3334567776544544333321
Q ss_pred C-----CCCCceEEEEeCCC-CEEEEEeCCCCCCeEEEEecCCCceEEEeeC---CC---------------CCceEEEE
Q psy13635 216 T-----DLVEPRAITLSPAH-GYLFWSDWNEKRPKIERSLLNGGERVLLVKD---RL---------------GWPNGITL 271 (357)
Q Consensus 216 ~-----~~~~P~giavd~~~-g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~---~l---------------~~P~giai 271 (357)
. .-.....|+++|.+ +.||.+.... ..|++.. ||......+.. .. ..|..+++
T Consensus 161 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~--~~v~~S~-DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (789)
T 1sqj_A 161 IPDAFTNGIGYTSVIFDPERNGTIYASATAP--QGMYVTH-DGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKV 237 (789)
T ss_dssp SCCCCSTTTCEEEEEECTTSTTCEEEEESST--TCEEEES-STTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEE
T ss_pred CccccCCCCCeEEEEECCCCCCEEEEEEcCC--CeEEEEc-CCCcCcccCCCCcCccccccccccCcccccccccceeEE
Confidence 0 01234578888854 4788877542 3676654 44333332221 11 12388899
Q ss_pred ecCCCEEEEEe--------CCCCeEEEEeCCCCCeEEEecCCC----------C----ceEEEEEE---CCEEEEEeCCC
Q psy13635 272 DVDNEKLYWCD--------AKTDKIEMIDFDGNNRRELINENL----------P----HVFGISLL---GDYVYWTDWQR 326 (357)
Q Consensus 272 d~~~~~lY~~d--------~~~~~I~~~~~dG~~~~~i~~~~~----------~----~p~gia~~---~~~ly~td~~~ 326 (357)
++..+.||.+- ...+.|++.+-.|..=+.+..... . .-.+|+++ .+.+|+.-...
T Consensus 238 ~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~ 317 (789)
T 1sqj_A 238 ALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDR 317 (789)
T ss_dssp EECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECC
T ss_pred cCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEecc
Confidence 87788999872 245678887755554333321000 0 12467776 35788865321
Q ss_pred ------CeEEEEeCccCceeEEEe
Q psy13635 327 ------RSIDRVNKITGNDREVII 344 (357)
Q Consensus 327 ------~~I~~~~~~~g~~~~~i~ 344 (357)
+.|++=. ..|+.-+.+.
T Consensus 318 ~~~~~~~~l~~S~-DgG~tW~~~~ 340 (789)
T 1sqj_A 318 DPGPALDSIYLST-DAGATWKDVT 340 (789)
T ss_dssp CSCSSCCCEEEES-STTSSEEEHH
T ss_pred CCCcccccEEEec-CCCCCceeCc
Confidence 4565543 2466555443
No 302
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.19 E-value=7.3 Score=38.61 Aligned_cols=139 Identities=12% Similarity=0.026 Sum_probs=73.3
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc----------CCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCc
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL----------ITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKK 150 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~----------~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~ 150 (357)
++.||++.. .+.|+.++..... ...+.-...- ....+++++ +++||+... .+++..++.. |+.
T Consensus 77 ~g~vyv~~~-~~~v~AlD~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~v~v~~~-dg~l~alD~~tG~~ 150 (677)
T 1kb0_A 77 DGIMYVSAS-WSVVHAIDTRTGN--RIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAW-DGRLIALDAATGKE 150 (677)
T ss_dssp TTEEEEECG-GGCEEEEETTTTE--EEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCE
T ss_pred CCEEEEECC-CCeEEEEECCCCc--EEEEEcCCCCccccccccccCCCCCceEE--CCEEEEEcC-CCEEEEEECCCCCE
Confidence 678888765 3567777775442 1122111110 123567887 788998754 5789999974 554
Q ss_pred eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCC-----CCeEEEEEcC-CCceEEEecCCCC-----
Q psy13635 151 RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTG-----TDRIEVCRLE-GTHRKVLVNTDLV----- 219 (357)
Q Consensus 151 ~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~-----~~~I~~~~~~-g~~~~~~~~~~~~----- 219 (357)
+-..- .....+.+. . .....+++ ++.+|+.... .+.|..+|.. |+.+-......-.
T Consensus 151 ~W~~~-~~~~~~~~~--------~--~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~ 217 (677)
T 1kb0_A 151 VWHQN-TFEGQKGSL--------T--ITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPF 217 (677)
T ss_dssp EEEEE-TTTTCCSSC--------B--CCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCC
T ss_pred Eeeec-CCcCcCcCc--------c--cccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccc
Confidence 32221 110000000 0 01111233 5678876543 4577888764 5544333211100
Q ss_pred -----------Cc---------------eEEEEeCCCCEEEEEeCC
Q psy13635 220 -----------EP---------------RAITLSPAHGYLFWSDWN 239 (357)
Q Consensus 220 -----------~P---------------~giavd~~~g~Ly~~d~~ 239 (357)
.+ ..+++|+..+.||+....
T Consensus 218 ~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~ 263 (677)
T 1kb0_A 218 EDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGN 263 (677)
T ss_dssp SSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCC
T ss_pred cccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCC
Confidence 00 357899999999998654
No 303
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.12 E-value=6.3 Score=37.71 Aligned_cols=223 Identities=8% Similarity=-0.102 Sum_probs=118.4
Q ss_pred CcEEEEEcCCCCcc-e--E-eccCCCcEEEEEEEcc-----CCEEEEEeCCCCeEEEEEcCCCCcce--------eEEEE
Q psy13635 50 KDIRIANLSRPLKP-V--T-IIKDLEEGAAIDYYYK-----KSMVCWTDHGTEMISCCTFDGNNVGS--------KHNVI 112 (357)
Q Consensus 50 ~~i~~~~~~~~~~~-~--~-~~~~~~~~~~i~~d~~-----~~~ly~~d~~~~~I~~~~~~g~~~~~--------~~~~~ 112 (357)
..|+..++++.... . . +.........+++.|. ++.+..+-..++.|...++....... ....+
T Consensus 183 ~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l 262 (524)
T 2j04_B 183 SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL 262 (524)
T ss_dssp EEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE
T ss_pred ceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE
Confidence 34666666553211 1 1 2233456888999885 23455555566778877776542100 00122
Q ss_pred eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCC-ceEEEEecCCCCcceeeeeccCcccccCCceEEEe-CCCC-e
Q psy13635 113 TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGK-KRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVD-WVAR-N 189 (357)
Q Consensus 113 ~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~-~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD-~~~~-~ 189 (357)
...-....++++.+ .+ ...+-..++.|...++... ......... -....++++. +..+ .
T Consensus 263 ~~h~~~v~sv~~s~-~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H----------------~~~V~sv~~~~s~~g~~ 324 (524)
T 2j04_B 263 SLADSLITTFDFLS-PT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVH----------------DSYILSVSTAYSDFEDT 324 (524)
T ss_dssp CCTTTCEEEEEESS-SS-EEEEEETTSEEEEEETTBCSSCSEEEECS----------------SSCEEEEEEECCTTSCC
T ss_pred EcCCCCEEEEEecC-CC-eEEEEeCCCEEEEEECCCCCCceEEeecc----------------cccEEEEEEEcCCCCCe
Confidence 22223456666654 33 4566667899999998743 221111110 0134455322 2334 7
Q ss_pred EEEEeCCCCeEEEEEcCCCc-eEEEec-CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCce-EEEeeCCCCCc
Q psy13635 190 LYWTDTGTDRIEVCRLEGTH-RKVLVN-TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGER-VLLVKDRLGWP 266 (357)
Q Consensus 190 lY~td~~~~~I~~~~~~g~~-~~~~~~-~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~-~~~~~~~l~~P 266 (357)
++.+....+.|...++.... ...+.. ........++++|... .+.+-... ..|...++..... ..+. ......
T Consensus 325 ~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d--~tv~lwd~~~~~~~~~l~-gH~~~V 400 (524)
T 2j04_B 325 VVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY-SYIYSDGA--SSLRAVPSRAAFAVHPLV-SRETTI 400 (524)
T ss_dssp EEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT-EEEEECSS--SEEEEEETTCTTCCEEEE-ECSSCE
T ss_pred EEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC-eEEEeCCC--CcEEEEECcccccceeee-cCCCce
Confidence 77787777888888875422 222221 1112346799998644 44554442 4676666654433 3332 334566
Q ss_pred eEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 267 NGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 267 ~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
.++++.+. +..+.+-...+.|...+..+
T Consensus 401 ~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 401 TAIGVSRL-HPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEECCSS-CCBCEEEETTTEEECCBSCS
T ss_pred EEEEeCCC-CCeEEEEECCCEEEEEechH
Confidence 88888754 44445555566776666543
No 304
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.04 E-value=4.4 Score=35.69 Aligned_cols=263 Identities=8% Similarity=-0.014 Sum_probs=129.6
Q ss_pred CCcEEEEEcCCCC-cceEec--c-CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCC----cceeEEEEeCCcCCce
Q psy13635 49 SKDIRIANLSRPL-KPVTII--K-DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNN----VGSKHNVITNGLITPD 120 (357)
Q Consensus 49 ~~~i~~~~~~~~~-~~~~~~--~-~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~----~~~~~~~~~~~~~~p~ 120 (357)
...|+..++.... ...... . ......++++++.+..|. +-..++.|+..+..... ..+....+...-....
T Consensus 33 D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la-s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 111 (330)
T 2hes_X 33 DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA-AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK 111 (330)
T ss_dssp SSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE-EEETTSCEEEEEC-------CCCEEEEEEC----CEE
T ss_pred CCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE-EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE
Confidence 4568888886522 111122 2 345678999998665544 44456677777664321 0011223333345678
Q ss_pred eEEEEcCCCeEEEEeCCCCEEEEEEcCCC--ceEEEE-ecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCC
Q psy13635 121 GLAIDWLTEKLYWTDSETNKLEVSSLDGK--KRKVLY-WEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGT 197 (357)
Q Consensus 121 glavd~~~~~ly~td~~~~~I~~~~~~g~--~~~~~~-~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~ 197 (357)
++++.+. ++.+.+-...+.|...+++.. ..+.+. ..+ --.....+++.+.+. ++++-...
T Consensus 112 ~v~~sp~-g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~---------------h~~~v~~v~~~p~~~-~l~s~s~D 174 (330)
T 2hes_X 112 GVAWSND-GYYLATCSRDKSVWIWETDESGEEYECISVLQE---------------HSQDVKHVIWHPSEA-LLASSSYD 174 (330)
T ss_dssp EEEECTT-SCEEEEEETTSCEEEEECCTTCCCCEEEEEECC---------------CSSCEEEEEECSSSS-EEEEEETT
T ss_pred EEEECCC-CCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc---------------CCCceEEEEECCCCC-EEEEEcCC
Confidence 8999975 455556666788998888422 112111 111 112456788886554 45555556
Q ss_pred CeEEEEEcCCC--ceEEEecCCCCCceEEEEeCCC-C-EEEEEeCCCCCCeEEEEecCCC-----c---eEEEeeC-CCC
Q psy13635 198 DRIEVCRLEGT--HRKVLVNTDLVEPRAITLSPAH-G-YLFWSDWNEKRPKIERSLLNGG-----E---RVLLVKD-RLG 264 (357)
Q Consensus 198 ~~I~~~~~~g~--~~~~~~~~~~~~P~giavd~~~-g-~Ly~~d~~~~~~~I~~~~~dg~-----~---~~~~~~~-~l~ 264 (357)
+.|..-+.... ...............++++|.. + .|.-+... +.|...++.+. . ....+.. .-.
T Consensus 175 ~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D---~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (330)
T 2hes_X 175 DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD---STVRVWKYMGDDEDDQQEWVCEAILPDVHKR 251 (330)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT---SCEEEEEEEEECTTSCEEEEEEEECCSCCSS
T ss_pred CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC---CeEEEEEecCCCccccceeEEeeeccccccc
Confidence 67777665433 1222233334567889999863 3 34333333 34444443321 0 1111111 223
Q ss_pred CceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEE---ecCCCC-ceEEEEEE---CCEEEEEeCCCCeEEEEeC
Q psy13635 265 WPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRREL---INENLP-HVFGISLL---GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 265 ~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i---~~~~~~-~p~gia~~---~~~ly~td~~~~~I~~~~~ 334 (357)
....+++. .++.| .+-...+.|...+......+.+ ...... ....+++. ++.+..+-...+.|..-+.
T Consensus 252 ~v~~v~~s-~~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 252 QVYNVAWG-FNGLI-ASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp CEEEEEEC-TTSCE-EEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred ceEEEEEc-CCCEE-EEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 45678886 44544 4444566777776543321111 111222 34455553 2455555555566655443
No 305
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=92.97 E-value=5.7 Score=36.83 Aligned_cols=200 Identities=10% Similarity=-0.061 Sum_probs=112.4
Q ss_pred CceeEEEEcCCCeEEE---EeCCCCEEEEEEcCCC------ce---EEEEecCCCCcceeeeeccCcccccCCceEEEeC
Q psy13635 118 TPDGLAIDWLTEKLYW---TDSETNKLEVSSLDGK------KR---KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDW 185 (357)
Q Consensus 118 ~p~glavd~~~~~ly~---td~~~~~I~~~~~~g~------~~---~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~ 185 (357)
.+..+++++.++.|++ +....+.|...++... .. ..+. .. ..--..+.++++.+
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~-------------~~h~~~V~~v~~~p 159 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-LL-------------KDAGGMVIDMKWNP 159 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-CC-------------CSGGGSEEEEEECS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee-cc-------------CCCCCceEEEEECC
Confidence 4788999987777776 5666788888876432 00 0110 00 11123567889988
Q ss_pred CCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-CC
Q psy13635 186 VARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR-LG 264 (357)
Q Consensus 186 ~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~-l~ 264 (357)
..+.++.+....+.|...++...............+..++++|.+..|+.+... +.|...+.++.....+.... ..
T Consensus 160 ~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d---g~v~iwd~~~~~~~~~~~~~~~~ 236 (434)
T 2oit_A 160 TVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN---GTVVQYLPTLQEKKVIPCPPFYE 236 (434)
T ss_dssp SCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT---SCEEEECTTCCEEEEECCCTTCC
T ss_pred CCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC---CcEEEEccCCcccccccCCcccC
Confidence 767788777777889998887653322222223468899999986667666644 58888888855444432211 11
Q ss_pred -----CceEEEEecCCCEEEEEeCCC------CeEEEEeCCCCC---eEEEec-CC------CC-ce-EEEEE--ECCEE
Q psy13635 265 -----WPNGITLDVDNEKLYWCDAKT------DKIEMIDFDGNN---RRELIN-EN------LP-HV-FGISL--LGDYV 319 (357)
Q Consensus 265 -----~P~giaid~~~~~lY~~d~~~------~~I~~~~~dG~~---~~~i~~-~~------~~-~p-~gia~--~~~~l 319 (357)
...+++.+.....+.....+. ..+...++.... ...+.. .. .. .| +-+.. +-+.+
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~ 316 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLV 316 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEE
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEE
Confidence 335666664222222223222 225555554321 111111 00 11 22 22222 13789
Q ss_pred EEEeCCCCeEEEEeC
Q psy13635 320 YWTDWQRRSIDRVNK 334 (357)
Q Consensus 320 y~td~~~~~I~~~~~ 334 (357)
|++++.+..|..+.+
T Consensus 317 ~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 317 LAASAASTEVSILAR 331 (434)
T ss_dssp EEEETTCSBCEEEEE
T ss_pred EEecCCCCceeEEEe
Confidence 999999888877765
No 306
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.94 E-value=3.6 Score=39.99 Aligned_cols=152 Identities=5% Similarity=0.020 Sum_probs=89.9
Q ss_pred CCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCC----CCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCC
Q psy13635 177 HPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDL----VEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNG 252 (357)
Q Consensus 177 ~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~----~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg 252 (357)
...+++..|.+..|= +-...+.|...+.++ ......... .....++++|.+..|+.+... +.|...++.+
T Consensus 87 ~V~~vawSPdG~~LA-s~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D---GtVkIWd~~~ 160 (588)
T 2j04_A 87 YPRVCKPSPIDDWMA-VLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED---GELQFFSIRK 160 (588)
T ss_dssp CEEEEEECSSSSCEE-EEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT---SEEEEEECCC
T ss_pred cEEEEEECCCCCEEE-EEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC---CEEEEEECCC
Confidence 456677776554444 444455666666444 211111111 136789999998888888776 5777777776
Q ss_pred Cce--------EEEe---eCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCCeE----EEecCCCCceEEEEEECC
Q psy13635 253 GER--------VLLV---KDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNNRR----ELINENLPHVFGISLLGD 317 (357)
Q Consensus 253 ~~~--------~~~~---~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~----~i~~~~~~~p~gia~~~~ 317 (357)
... ..+- .....+...+++.+ ++ +++-...+.|+..+.++.... .+....-....++++.++
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~ 237 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDY 237 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETT
T ss_pred CccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECC
Confidence 642 2221 12235778999985 44 455566788999998886632 232222234566776655
Q ss_pred EEEEEeCCCCeEEEEeCccCce
Q psy13635 318 YVYWTDWQRRSIDRVNKITGND 339 (357)
Q Consensus 318 ~ly~td~~~~~I~~~~~~~g~~ 339 (357)
.|-.+. .++|...+..+++.
T Consensus 238 ~LASa~--~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 238 KVVLTC--PGYVHKIDLKNYSI 257 (588)
T ss_dssp EEEEEC--SSEEEEEETTTTEE
T ss_pred EEEEEe--CCeEEEEECCCCeE
Confidence 555553 46888887744444
No 307
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=92.88 E-value=5.3 Score=36.22 Aligned_cols=196 Identities=7% Similarity=-0.123 Sum_probs=100.4
Q ss_pred CCcEEEEEcCCCCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE----------------
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI---------------- 112 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~---------------- 112 (357)
++.|+.-|+............-....+++|+|.+..+..+-..++.|+..++...... .+..
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~--~~~~~~~~~~~~~~~s~~~~ 242 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSA--EENSQTELVKNPWLLTLNTL 242 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC------------CSCCCSEEEESG
T ss_pred CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccc--ccccccCCcccceEEecccc
Confidence 5678888886644444555566678899999977777777777788888887654310 1000
Q ss_pred --------eCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccC----cccccCCce
Q psy13635 113 --------TNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLP----TIEVEHPDG 180 (357)
Q Consensus 113 --------~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~----~~~~~~p~g 180 (357)
.........+++....++...+-...+++...++........+......-..... .+ ........+
T Consensus 243 ~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 320 (393)
T 4gq1_A 243 PLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNL--LPNVQGISLFPSLLG 320 (393)
T ss_dssp GGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CC--SCSEEEECSSCCSSC
T ss_pred cceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEE--ccccccccccCccee
Confidence 0111233455655445555566666777777776433221111000000000000 00 001112223
Q ss_pred EEEeCCCCeEE-EEeCCCCeEEEEEcCCC-ceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCC
Q psy13635 181 VAVDWVARNLY-WTDTGTDRIEVCRLEGT-HRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGG 253 (357)
Q Consensus 181 lavD~~~~~lY-~td~~~~~I~~~~~~g~-~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~ 253 (357)
....+..+.+| .+....+.|...+.... ....... .-.....++++|.+..|-.+..+ .+..+.+.|.
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~-~~~~V~svafspdG~~LA~as~~----Gv~lvrL~gf 390 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ-LGMPIVDFCWHQDGSHLAIATEG----SVLLTRLMGF 390 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE-CSSCEEEEEECTTSSEEEEEESS----EEEEEEEGGG
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC-CCCcEEEEEEcCCCCEEEEEeCC----CeEEEEEeCc
Confidence 33333444444 44555678888887743 3333332 33457899999986666655433 5655555543
No 308
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=92.74 E-value=8.9 Score=38.41 Aligned_cols=254 Identities=12% Similarity=0.049 Sum_probs=135.4
Q ss_pred cEEEEEEEccC-CEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC-------cCCceeEEEEcC-CCeEEEEeCC-----
Q psy13635 72 EGAAIDYYYKK-SMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG-------LITPDGLAIDWL-TEKLYWTDSE----- 137 (357)
Q Consensus 72 ~~~~i~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~-------~~~p~glavd~~-~~~ly~td~~----- 137 (357)
...+|++++.+ +.+|. -...+.|+|..-.|.. .+.+... ......|++|+. .+.||++-..
T Consensus 24 ~i~~i~~~p~~~~~~~~-~~~~ggv~rS~D~G~t----W~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~ 98 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYA-RAAIGGAYRWDPSTET----WIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDW 98 (737)
T ss_dssp CCCEEEECSSSTTCEEE-ECSSSCEEEEETTTTE----EEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSS
T ss_pred eeeEEEECCCCCCEEEE-EecCCcEEEeCCCCCC----EEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccc
Confidence 67789999876 45554 4445678988766653 4444332 234678999984 4678887532
Q ss_pred ---CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCC-CeEEEEeCCCCeEEEEEcCCCceEEE
Q psy13635 138 ---TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVA-RNLYWTDTGTDRIEVCRLEGTHRKVL 213 (357)
Q Consensus 138 ---~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~-~~lY~td~~~~~I~~~~~~g~~~~~~ 213 (357)
...|++..=.|..=+.+... ...+.. ...-.....|++||.+ +.||........|++..-.|..=+.+
T Consensus 99 ~~~~~~l~~S~DgG~TW~~~~~~-~~~~~~-------~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~ 170 (737)
T 2cn3_A 99 LPNMGAILRSTDRGETWEKTILP-FKMGGN-------MPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKV 170 (737)
T ss_dssp SCCCCEEEEESSSSSSCEEEECS-SCCCTT-------STTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTTSSCEEC
T ss_pred ccCCccEEEeCCCCCCcccCCCC-cccCCC-------cCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCCcceecc
Confidence 34566654334332333211 000000 0000012579999876 56776542224677665445432222
Q ss_pred ecC---CC-------------CCceEEEEeCCC-------CEEEEEeCCCCCCeEEEEecCCCceEEEeeCCC---CCce
Q psy13635 214 VNT---DL-------------VEPRAITLSPAH-------GYLFWSDWNEKRPKIERSLLNGGERVLLVKDRL---GWPN 267 (357)
Q Consensus 214 ~~~---~~-------------~~P~giavd~~~-------g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l---~~P~ 267 (357)
... .. ..-..+++||.. +.||.+..... ..|++. .||...-..+. .+ ..|.
T Consensus 171 ~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~-~~v~~S-~DgG~tW~~~~-~~p~~~~~~ 247 (737)
T 2cn3_A 171 ESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN-ESIYRS-TDGGVTWKAVP-GQPKGLLPH 247 (737)
T ss_dssp TTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS-CCEEEE-SSTTSCCEECT-TCCCSSEEE
T ss_pred cCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC-ccEEEE-cCCCCceEECC-CCCCcccce
Confidence 110 00 012347888753 48999875532 367776 56554444332 22 1234
Q ss_pred EEEEecCCCEEEEEeC---------CCCeEEEEeCCCCCeEEEecCCC---CceE---EEEEE---CCEEEEEeCC----
Q psy13635 268 GITLDVDNEKLYWCDA---------KTDKIEMIDFDGNNRRELINENL---PHVF---GISLL---GDYVYWTDWQ---- 325 (357)
Q Consensus 268 giaid~~~~~lY~~d~---------~~~~I~~~~~dG~~~~~i~~~~~---~~p~---gia~~---~~~ly~td~~---- 325 (357)
.+++++ .+.||++-. ..+.|++.+..|..-+.+..... ..++ +|+++ .+.||+....
T Consensus 248 ~~~~~~-~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~~ 326 (737)
T 2cn3_A 248 HGVLAS-NGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWP 326 (737)
T ss_dssp EEEECT-TSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEECCCSS
T ss_pred EEEECC-CCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecccCCC
Confidence 566764 788998641 44578888766665444332111 1222 46775 3788887643
Q ss_pred CCeEEEEeCccCceeEEE
Q psy13635 326 RRSIDRVNKITGNDREVI 343 (357)
Q Consensus 326 ~~~I~~~~~~~g~~~~~i 343 (357)
...|++=. ..|+.-+.+
T Consensus 327 ~~~l~~S~-DgG~tW~~~ 343 (737)
T 2cn3_A 327 DEYIFRST-DGGATWKNI 343 (737)
T ss_dssp CCCEEEES-STTSSCEES
T ss_pred CccEEEeC-CCCccccch
Confidence 23455433 367777666
No 309
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=92.58 E-value=8.9 Score=38.06 Aligned_cols=59 Identities=14% Similarity=-0.090 Sum_probs=33.8
Q ss_pred CeEEEEeCCCCCeEEEecCCCCceEE-EEEECCEEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 286 DKIEMIDFDGNNRRELINENLPHVFG-ISLLGDYVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 286 ~~I~~~~~dG~~~~~i~~~~~~~p~g-ia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
+.+..+|+......--.........| ++..++.+|.. ...+.++.+|..+|+.+-....
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEEC
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCccceeeeC
Confidence 56888887543322222111211122 33446777776 4568899999888887765533
No 310
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.50 E-value=6.1 Score=35.95 Aligned_cols=224 Identities=14% Similarity=0.044 Sum_probs=114.5
Q ss_pred cEEEEEEEcc--CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC-----------------c--CCceeEEEEcC-CC
Q psy13635 72 EGAAIDYYYK--KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG-----------------L--ITPDGLAIDWL-TE 129 (357)
Q Consensus 72 ~~~~i~~d~~--~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~-----------------~--~~p~glavd~~-~~ 129 (357)
...++++++. .+.||.... .+.|++..-.|.. .+.+... . .....|++|+. .+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~-~ggl~~S~DgG~t----W~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~ 190 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTS-PQGLFRSTDHGAS----WEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPK 190 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEE-TTEEEEESSTTSB----CEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTT
T ss_pred ceeEEEeCCCCCCCEEEEEec-CCcEEEEcCCCCC----eEECcCccCCccccccccccccCCCCCCceeEEEECCCCCC
Confidence 4567888874 577776532 4578877555543 3322210 0 12347888874 46
Q ss_pred eEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcc---cccCCceEEEeCCC-CeEEEEeCCCCeEEEEEc
Q psy13635 130 KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTI---EVEHPDGVAVDWVA-RNLYWTDTGTDRIEVCRL 205 (357)
Q Consensus 130 ~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~---~~~~p~glavD~~~-~~lY~td~~~~~I~~~~~ 205 (357)
.||+.... +.|++..-.|..-+.+. .+... .. +|.. ....+..|++|+.+ +.||+... +.|++.+-
T Consensus 191 ~l~vg~~~-ggl~~s~DgG~tW~~~~-~~~~~-~~-----~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--~gl~~s~D 260 (394)
T 3b7f_A 191 HLYIGMSS-GGVFESTDAGTDWKPLN-RGCAA-NF-----LPDPNVEFGHDPHCVVQHPAAPDILYQQNH--CGIYRMDR 260 (394)
T ss_dssp CEEEEEET-BEEEEESSTTSSCEECC-TTCCC-TT-----SSSSSSSSCBCEEEEEECSSSTTEEEEEET--TEEEEEET
T ss_pred EEEEEECC-CCEEEECCCCCCceECC-CCccc-cc-----cCCCccccCcceeEEEECCCCCCEEEEEcC--CeEEEeCC
Confidence 78887532 35666554444333221 11000 00 0000 01235678999764 67887654 45888775
Q ss_pred CCCceEEEecCCCC-----CceEEEEeCC-CCEEEEEeCC----------CCCCeEEEEecCCCceEEEeeCCCCC----
Q psy13635 206 EGTHRKVLVNTDLV-----EPRAITLSPA-HGYLFWSDWN----------EKRPKIERSLLNGGERVLLVKDRLGW---- 265 (357)
Q Consensus 206 ~g~~~~~~~~~~~~-----~P~giavd~~-~g~Ly~~d~~----------~~~~~I~~~~~dg~~~~~~~~~~l~~---- 265 (357)
.|..-+.+. ..+. ....|+++|. .+.||+.... .....|++..-.|..-+.+ ..++..
T Consensus 261 ~G~tW~~~~-~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~-~~glp~~~~~ 338 (394)
T 3b7f_A 261 REGVWKRIG-DAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQ-DRGLPTDQAW 338 (394)
T ss_dssp TTTEEECGG-GGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEE-CBTSCCSSCC
T ss_pred CCCcceECC-CCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceEC-CCCCCCcccc
Confidence 565433322 1122 2346888863 4678886421 1113676654334333333 233322
Q ss_pred ----ceEEEEecCC-CEEEEEeCCCCeEEEEeCCCCCeEEEecCCCCceEEEEE
Q psy13635 266 ----PNGITLDVDN-EKLYWCDAKTDKIEMIDFDGNNRRELINENLPHVFGISL 314 (357)
Q Consensus 266 ----P~giaid~~~-~~lY~~d~~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~ 314 (357)
..++++|+.+ +.||+.- ..+.|++..-.|..=+.+. ..++....+++
T Consensus 339 ~~~~~~~~~~~p~~~~~l~~g~-~~g~l~~S~D~G~tW~~~~-~~lp~~~~v~~ 390 (394)
T 3b7f_A 339 LTVKRQAMTADAHAPVGVYFGT-TGGEIWASADEGEHWQCIA-SHLPHIYAVQS 390 (394)
T ss_dssp CCCCTBSEEECCSSSCCEEEEC-TTSCEEEESSTTSBCEEEE-CSCSCEEEEEE
T ss_pred ceEEEEEEEECCCCCCEEEEEe-CCCeEEEECCCCCCceEcc-cCCCCeeEEEE
Confidence 1368888654 4577753 3456777765665544443 34555555443
No 311
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.28 E-value=8.8 Score=37.27 Aligned_cols=173 Identities=6% Similarity=-0.077 Sum_probs=104.8
Q ss_pred CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc----CCceeEEEEcCCCeEEEEeCCCCEEEEEE
Q psy13635 70 LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL----ITPDGLAIDWLTEKLYWTDSETNKLEVSS 145 (357)
Q Consensus 70 ~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~----~~p~glavd~~~~~ly~td~~~~~I~~~~ 145 (357)
.....++++.|++..|-.+.. ++.+...+.++. ...+.+.. ....++++.|.++.|+.+. ..++|...+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~-dg~V~iwd~~~~-----l~~l~~~~~~~~~sv~svafSPDG~~LAsgs-~DGtVkIWd 157 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSN-NGNVSVFKDNKM-----LTNLDSKGNLSSRTYHCFEWNPIESSIVVGN-EDGELQFFS 157 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEET-TSCEEEEETTEE-----EEECCCSSCSTTTCEEEEEECSSSSCEEEEE-TTSEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeC-CCcEEEEeCCce-----eeeccCCCccccccEEEEEEcCCCCEEEEEc-CCCEEEEEE
Confidence 456889999987666655543 445555553321 22222111 1467899999877777665 478999999
Q ss_pred cCCCce--------EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceE----EE
Q psy13635 146 LDGKKR--------KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRK----VL 213 (357)
Q Consensus 146 ~~g~~~--------~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~----~~ 213 (357)
+.+... ..+ .... .+...+...+++.|.+ +++-...+.|...+.++.... .+
T Consensus 158 ~~~~~l~~~~~i~l~ti-~~~~------------~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 158 IRKNSENTPEFYFESSI-RLSD------------AGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp CCCCTTTCCCCEEEEEE-ECSC------------TTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEE
T ss_pred CCCCccccccceeeeee-eccc------------ccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeee
Confidence 887642 222 1110 0111356777777543 556666778888888876632 23
Q ss_pred ecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCCCCCceEEEE
Q psy13635 214 VNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDRLGWPNGITL 271 (357)
Q Consensus 214 ~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~l~~P~giai 271 (357)
....-....++++. ++.|-.+. . +.|...+..+...............++++
T Consensus 222 ~~~h~~~V~svaFs--g~~LASa~-~---~tIkLWd~~~~~~~~~~~gh~~~V~~va~ 273 (588)
T 2j04_A 222 QNASRRKITDLKIV--DYKVVLTC-P---GYVHKIDLKNYSISSLKTGSLENFHIIPL 273 (588)
T ss_dssp ECCCSSCCCCEEEE--TTEEEEEC-S---SEEEEEETTTTEEEEEECSCCSCCCEEEE
T ss_pred cccccCcEEEEEEE--CCEEEEEe-C---CeEEEEECCCCeEEEEEcCCCceEEEEEe
Confidence 22233467888888 35665553 2 48988998887665554344455677888
No 312
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.15 E-value=8.5 Score=36.81 Aligned_cols=235 Identities=6% Similarity=-0.130 Sum_probs=113.7
Q ss_pred EEEEeCCCCeEEEEEcCCCCccee-EEEEeCCcCCceeEEEEcC-----CCeEEEEeCCCCEEEEEEcCCCceE---EEE
Q psy13635 85 VCWTDHGTEMISCCTFDGNNVGSK-HNVITNGLITPDGLAIDWL-----TEKLYWTDSETNKLEVSSLDGKKRK---VLY 155 (357)
Q Consensus 85 ly~~d~~~~~I~~~~~~g~~~~~~-~~~~~~~~~~p~glavd~~-----~~~ly~td~~~~~I~~~~~~g~~~~---~~~ 155 (357)
++.+...++.|...++++...... ...+......+..+++.+. .+.+..+-+..+.|...++...... ..
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~- 253 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK- 253 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE-
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce-
Confidence 344444455566556655431100 1122223345677888764 2456666666788888887644211 00
Q ss_pred ecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCC-CceEEEecCCCCCceEEE-EeCCCC-E
Q psy13635 156 WEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEG-THRKVLVNTDLVEPRAIT-LSPAHG-Y 232 (357)
Q Consensus 156 ~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g-~~~~~~~~~~~~~P~gia-vd~~~g-~ 232 (357)
...+|... + ...-....++++.+ .+ ..++....+.|...++.. ...............+|+ ..+..| .
T Consensus 254 --~~~~p~~~-l----~~h~~~v~sv~~s~-~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~ 324 (524)
T 2j04_B 254 --MCEKPSLT-L----SLADSLITTFDFLS-PT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDT 324 (524)
T ss_dssp --CCCSCSEE-E----CCTTTCEEEEEESS-SS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCC
T ss_pred --eecCceEE-E----EcCCCCEEEEEecC-CC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCe
Confidence 00011000 0 00012345666653 33 455666678899998873 333232333334567774 223345 6
Q ss_pred EEEEeCCCCCCeEEEEecCCCce-EEEee-CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCCCC-eEEEecCCCCce
Q psy13635 233 LFWSDWNEKRPKIERSLLNGGER-VLLVK-DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDGNN-RRELINENLPHV 309 (357)
Q Consensus 233 Ly~~d~~~~~~~I~~~~~dg~~~-~~~~~-~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG~~-~~~i~~~~~~~p 309 (357)
++.+-... +.|...++..... ..+.. ........+++.+. +..+++-...+.|...+..... ...+. ......
T Consensus 325 ~laS~S~D--~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V 400 (524)
T 2j04_B 325 VVSTVAVD--GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ-IYSYIYSDGASSLRAVPSRAAFAVHPLV-SRETTI 400 (524)
T ss_dssp EEEEEETT--SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT-TTEEEEECSSSEEEEEETTCTTCCEEEE-ECSSCE
T ss_pred EEEEeccC--CeEEEEECCCCCcccccccccccCcccceEeCCC-cCeEEEeCCCCcEEEEECcccccceeee-cCCCce
Confidence 66665553 4777777654222 12211 11123467888864 4446666666778888865433 23333 234455
Q ss_pred EEEEEE-CCEEEEEeCCCCeEEEEe
Q psy13635 310 FGISLL-GDYVYWTDWQRRSIDRVN 333 (357)
Q Consensus 310 ~gia~~-~~~ly~td~~~~~I~~~~ 333 (357)
.++++. .+..+.+-...++|...+
T Consensus 401 ~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 401 TAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp EEEECCSSCCBCEEEETTTEEECCB
T ss_pred EEEEeCCCCCeEEEEECCCEEEEEe
Confidence 666665 244444444445554444
No 313
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=92.14 E-value=6.2 Score=35.20 Aligned_cols=230 Identities=9% Similarity=0.037 Sum_probs=121.7
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCc
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKK 150 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~ 150 (357)
.....++|++++..|..+. . +.+...+.+.. .............+++.+..+.+.++....+.|...+.....
T Consensus 20 ~~V~~v~fs~dg~~la~g~-~-~~~~iw~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILST-L-KSFEIYNVHPV-----AHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp CCCCEEEECTTSSEEEEEC-S-SEEEEEEETTE-----EEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred CceEEEEECCCCCEEEEEc-C-CEEEEEecCCc-----ceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence 3567888888666554433 2 34444555433 222222222355667777677776777777889988876443
Q ss_pred eEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCC-c-eEEEecCCCCCceE-EEEe
Q psy13635 151 RKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGT-H-RKVLVNTDLVEPRA-ITLS 227 (357)
Q Consensus 151 ~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~-~-~~~~~~~~~~~P~g-iavd 227 (357)
........ ....+++++ .+.++++. .+.|...++... . ...+ ..|.+ +++.
T Consensus 93 ~~~~~~~~-----------------~~v~~v~~~--~~~~~~~~--~~~i~i~d~~~~~~~~~~~-----~~~~~~~~~s 146 (355)
T 3vu4_A 93 DVSRIKVD-----------------APVKDLFLS--REFIVVSY--GDVISVFKFGNPWKRITDD-----IRFGGVCEFS 146 (355)
T ss_dssp EEEEEECS-----------------SCEEEEEEC--SSEEEEEE--TTEEEEEESSTTCCBSSCC-----EEEEEEEEEE
T ss_pred EEEEEECC-----------------CceEEEEEc--CCEEEEEE--cCEEEEEECCCCceeeEEe-----ccCCceEEEE
Confidence 32222110 123344444 33455443 346777776644 1 1111 11433 3444
Q ss_pred CCCCEEEEEeCCCCCCeEEEEecCCCc---------------e-EEEeeCCCCCceEEEEecCCCEEEEEeCCCCe-EEE
Q psy13635 228 PAHGYLFWSDWNEKRPKIERSLLNGGE---------------R-VLLVKDRLGWPNGITLDVDNEKLYWCDAKTDK-IEM 290 (357)
Q Consensus 228 ~~~g~Ly~~d~~~~~~~I~~~~~dg~~---------------~-~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~-I~~ 290 (357)
+ ..+.++.... .+.|...++.... . ...+...-.....+++++. +++..+-...+. |..
T Consensus 147 ~--~~la~~sg~~-~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 147 N--GLLVYSNEFN-LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-SDMVATCSQDGTIIRV 222 (355)
T ss_dssp T--TEEEEEESSC-TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-SSEEEEEETTCSEEEE
T ss_pred c--cEEEEeCCCc-CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-CCEEEEEeCCCCEEEE
Confidence 3 5555542222 2567777766433 0 1222233455689999864 555555556676 888
Q ss_pred EeCC-CCCeEEEecC-CCCceEEEEEE-CCEEEEEeCCCCeEEEEeCccC
Q psy13635 291 IDFD-GNNRRELINE-NLPHVFGISLL-GDYVYWTDWQRRSIDRVNKITG 337 (357)
Q Consensus 291 ~~~d-G~~~~~i~~~-~~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g 337 (357)
.+.. |.....+... .......+++. ++....+-...+.|...+..++
T Consensus 223 wd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 223 FKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 8886 4444444312 34456778886 3555556566678877776443
No 314
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=91.83 E-value=7.2 Score=35.32 Aligned_cols=241 Identities=5% Similarity=-0.130 Sum_probs=119.4
Q ss_pred CCcEEEEEcCCCCcce-Eec----cCCCcEEEEEEEc-------cCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc
Q psy13635 49 SKDIRIANLSRPLKPV-TII----KDLEEGAAIDYYY-------KKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL 116 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~-~~~----~~~~~~~~i~~d~-------~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~ 116 (357)
++.|+..|+....... .+. ..-....+++|.+ .++++..+-..++.|+..++.... ........-
T Consensus 110 d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~---~~~~~~~~~ 186 (393)
T 4gq1_A 110 DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG---PILAGYPLS 186 (393)
T ss_dssp TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE---EEEEEEECS
T ss_pred CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc---eeeeecCCC
Confidence 4568877776532221 111 2345688999976 256788887788888888876553 122333333
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEE-EEecC-CCCcceeeeec-------cCcccccCCceEEEeCCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKV-LYWED-IDQPRAIASYK-------LPTIEVEHPDGVAVDWVA 187 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~-~~~~~-~~~p~~i~~~~-------~~~~~~~~p~glavD~~~ 187 (357)
..+..+++.|.+.++..+-..++.|...++....... ..... ........... ...........+++....
T Consensus 187 ~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~d 266 (393)
T 4gq1_A 187 SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSD 266 (393)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTT
T ss_pred CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCC
Confidence 5678899998777777777778999999876543211 11000 00000000000 001111234455655445
Q ss_pred CeEEEEeCCCCeEEEEEcCCCceE-EEec-----------------CCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEe
Q psy13635 188 RNLYWTDTGTDRIEVCRLEGTHRK-VLVN-----------------TDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSL 249 (357)
Q Consensus 188 ~~lY~td~~~~~I~~~~~~g~~~~-~~~~-----------------~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~ 249 (357)
+...++-...+.+..-++...... .+.. .......+....+..+.+|.+-... .+.|...+
T Consensus 267 g~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~-Dg~V~lwd 345 (393)
T 4gq1_A 267 GSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ-HGLIQLIN 345 (393)
T ss_dssp TCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT-TTEEEEEE
T ss_pred CCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC-CCEEEEEE
Confidence 555556666666766665432111 1100 0011122233344344445444332 25777777
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCCC
Q psy13635 250 LNGGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFDG 295 (357)
Q Consensus 250 ~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~dG 295 (357)
.............-.....+++.+++..|-.+. .+.+..+.+.|
T Consensus 346 ~~~~~~~~~~~~~~~~V~svafspdG~~LA~as--~~Gv~lvrL~g 389 (393)
T 4gq1_A 346 TYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT--EGSVLLTRLMG 389 (393)
T ss_dssp TTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE--SSEEEEEEEGG
T ss_pred CCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEeC
Confidence 764433322222223457889987666665554 34455554443
No 315
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.71 E-value=12 Score=37.45 Aligned_cols=261 Identities=10% Similarity=0.013 Sum_probs=141.2
Q ss_pred CeEEEEEeCCcEEEEEcCCCCcceEecc-CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEE---eCCc
Q psy13635 41 AQMLLFATSKDIRIANLSRPLKPVTIIK-DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVI---TNGL 116 (357)
Q Consensus 41 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~---~~~~ 116 (357)
...|.++....+.++|.... .+..... .......+.. .++.||++... .|++++..... .... ..++
T Consensus 73 ~g~lWigT~~Gl~~yd~~~~-~f~~~~~~~~~~i~~i~~--~~g~lWigt~~--Gl~~~~~~~~~----~~~~~~~~~~l 143 (758)
T 3ott_A 73 NTYLYMGTDNGILVYNYRAD-RYEQPETDFPTDVRTMAL--QGDTLWLGALN--GLYTYQLQSRK----LTSFDTRRNGL 143 (758)
T ss_dssp TTEEEEEETTEEEEEETTTT-EECCCSCCCCSCEEEEEE--ETTEEEEEETT--EEEEEETTTCC----EEEECHHHHCC
T ss_pred CCcEEEEeCCCeEEEeCCCC-EEECcccCCCceEEEEEe--cCCcEEEEcCC--cceeEeCCCCe----EEEeccCCCCc
Confidence 34577777778999997652 2222111 1123444543 36888887543 78888876543 2222 1111
Q ss_pred --CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEe
Q psy13635 117 --ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTD 194 (357)
Q Consensus 117 --~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td 194 (357)
.....+..| ..+.||+... +.+.+++......+.+.... . .. ..-.....|..|..++.||+..
T Consensus 144 ~~~~i~~i~~d-~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~-~--~~--------~~~~~i~~i~~d~~~~~lWigt 209 (758)
T 3ott_A 144 PNNTIYSIIRT-KDNQIYVGTY--NGLCRYIPSNGKFEGIPLPV-H--SS--------QSNLFVNSLLEDTTRQCVWIGT 209 (758)
T ss_dssp SCSCEEEEEEC-TTCCEEEEET--TEEEEEETTTTEEEEECCCC-C--TT--------CSSCCEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEEc-CCCCEEEEeC--CCHhhCccCCCceEEecCCC-c--cc--------cccceeEEEEEECCCCEEEEEE
Confidence 345677788 4778888653 46888887654433221110 0 00 0001245678886566677765
Q ss_pred CCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeC-----CC--CCce
Q psy13635 195 TGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKD-----RL--GWPN 267 (357)
Q Consensus 195 ~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~-----~l--~~P~ 267 (357)
. +.+.++++..................|..|. .|.|++.... .+.+.+.+......+... .+ ....
T Consensus 210 ~--~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigT~~----Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 282 (758)
T 3ott_A 210 E--GYLFQYFPSTGQIKQTEAFHNNSIKSLALDG-NGDLLAGTDN----GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIW 282 (758)
T ss_dssp E--EEEEEEETTTTEEEEEEEEEEEEEEEEEECT-TCCEEEEETT----EEEEECCTTSCCEEECCCTTCTTSCSCSCEE
T ss_pred C--CCCeEEcCCCCeEEeccCCCCCeEEEEEEcC-CCCEEEEeCC----ceeEEecCCCcEEEEEcCCCCcCcCCcCeEE
Confidence 3 3588888765433222111112356788885 5888888632 688887765544444321 12 1246
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEec---CC--CCceEEEEEE-CCEEEEEeCCCCeEEEEeCcc
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELIN---EN--LPHVFGISLL-GDYVYWTDWQRRSIDRVNKIT 336 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~---~~--~~~p~gia~~-~~~ly~td~~~~~I~~~~~~~ 336 (357)
.|..| .++.|++.-.. + +.....+......... .. ......|..+ +|.||+.. . +.+.+++..+
T Consensus 283 ~i~~D-~~g~lWiGT~~-G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt-~-~Gl~~~~~~~ 352 (758)
T 3ott_A 283 NIFAD-QEHNIWLGTDY-G-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG-A-NGLIRFTDPA 352 (758)
T ss_dssp EEEEC-TTCCEEEEESS-S-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE-T-TEEEEESCTT
T ss_pred EEEEc-CCCCEEEEeCC-c-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEee-C-Ccceeecccc
Confidence 78888 67888887643 4 5444433322211110 11 1234566666 47788775 3 4677776543
No 316
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=89.46 E-value=19 Score=36.18 Aligned_cols=256 Identities=14% Similarity=0.074 Sum_probs=130.7
Q ss_pred CCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC------------cCCceeEEEEcC-CCeEEEEe
Q psy13635 69 DLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG------------LITPDGLAIDWL-TEKLYWTD 135 (357)
Q Consensus 69 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~------------~~~p~glavd~~-~~~ly~td 135 (357)
.-....+|++++.+..++|+....+.|++..-.|.. .+.+... ......|++|+. .+.+|.+.
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~t----W~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWE----WEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTE----EEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCC----eeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 344788999999875444444445678877655543 4444332 234678899974 46778754
Q ss_pred C------CCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCC--ceEEEeCCC-CeEEEEeCCCCeEEEEEcC
Q psy13635 136 S------ETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHP--DGVAVDWVA-RNLYWTDTGTDRIEVCRLE 206 (357)
Q Consensus 136 ~------~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p--~glavD~~~-~~lY~td~~~~~I~~~~~~ 206 (357)
. ..+.|++..=.|..=+.+.. ....+ ....... ..|++++.+ +.+|.... ...|++..-.
T Consensus 95 g~~~~~~~~~~i~~S~DgG~TW~~~~~-~~~~~---------~~~~g~~~~~~l~v~p~~~~~v~a~~~-~~~l~~S~Dg 163 (763)
T 3a0f_A 95 GDYVQWDPWAAFLVSDDRGKTFKQYRS-PVPMG---------ANDMGRNGGERLAVNPHWTDELWFGSR-TQGLWRSTDR 163 (763)
T ss_dssp CSCTTTCSCCEEEEESSTTSSCEEEEC-SSCCC---------TTSTTTTSBCCEEECTTSTTCEEEECS-SSCEEEESST
T ss_pred cccccCCCCceEEEECCCCCCceeccC-CcccC---------ccccCccccceEEECCCCCCEEEEEeC-CCcEEEECCC
Confidence 3 13566654433433233221 10000 0000011 358888764 56776543 3567766544
Q ss_pred CCceEEEecCC-----CCCceEEEEeCCC-CEEEEEeCCCCCCeEEEEecCCCceEEEeeC-------------------
Q psy13635 207 GTHRKVLVNTD-----LVEPRAITLSPAH-GYLFWSDWNEKRPKIERSLLNGGERVLLVKD------------------- 261 (357)
Q Consensus 207 g~~~~~~~~~~-----~~~P~giavd~~~-g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~------------------- 261 (357)
|+.=+.+.... ......|+++|.+ +.+|++.... +.|++..=.|..=+.+...
T Consensus 164 G~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~--g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~ 241 (763)
T 3a0f_A 164 AQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV--GGLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAI 241 (763)
T ss_dssp TSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST--TCEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCC
T ss_pred CcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCC--CeEEEECCCCCCccccCCCccccccccccccccccccc
Confidence 44322222100 1124577888764 4788887652 1466664334332322110
Q ss_pred --CCCCceEEEEecCCCEEEEEe--------CCCCeEEEEeCCCCCeEEEecC-CCCce---------------EEEEEE
Q psy13635 262 --RLGWPNGITLDVDNEKLYWCD--------AKTDKIEMIDFDGNNRRELINE-NLPHV---------------FGISLL 315 (357)
Q Consensus 262 --~l~~P~giaid~~~~~lY~~d--------~~~~~I~~~~~dG~~~~~i~~~-~~~~p---------------~gia~~ 315 (357)
....|..+++++ ++.||++- ...+.+++.+-.|..=+.+... ..... .+|+++
T Consensus 242 ~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~gg~~~i~v~ 320 (763)
T 3a0f_A 242 QSSGPLPIKIALGK-NGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSREGANTYPAPTGNKKVVPGGWNGISVG 320 (763)
T ss_dssp SSSSCEEEEEEECT-TSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSSSSCEESCCCCCTTSCCCEEEEEEEC
T ss_pred cCCCCcceeEEECC-CCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCCCCccccccccccccccCCceeEEEc
Confidence 112345677764 78899873 1345788876555443332210 00011 356775
Q ss_pred -CCEEEEEeCC---CCeEEEEeCccCceeEEE
Q psy13635 316 -GDYVYWTDWQ---RRSIDRVNKITGNDREVI 343 (357)
Q Consensus 316 -~~~ly~td~~---~~~I~~~~~~~g~~~~~i 343 (357)
.+.+|+.... .+.|++= ...|+.-+.+
T Consensus 321 ~~~~v~~~~~~~~~~~~l~~S-~DgG~tW~~~ 351 (763)
T 3a0f_A 321 NGDTVVVSTLDANGEDSVYLS-RDAGNSWKDL 351 (763)
T ss_dssp STBCEEEEEESCTTSCCEEEE-SBTTSSEEEH
T ss_pred CCCeEEEEecCCCCCCCEEEE-CCCCCCcccC
Confidence 5678876541 1344433 3346655554
No 317
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=89.14 E-value=18 Score=35.60 Aligned_cols=64 Identities=11% Similarity=0.065 Sum_probs=37.6
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC-Cc---------CCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCc
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-GL---------ITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKK 150 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-~~---------~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~ 150 (357)
++.||++.. .+.|+.++..... ...+.-.. .. ....+++++ +++||+... .++|..++.. |+.
T Consensus 66 ~g~vyv~~~-~~~v~AlD~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~-dg~l~alD~~tG~~ 139 (668)
T 1kv9_A 66 DGVIYTSMS-WSRVIAVDAASGK--ELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGTL-DGRLIALDAKTGKA 139 (668)
T ss_dssp TTEEEEEEG-GGEEEEEETTTCC--EEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEECT-TSEEEEEETTTCCE
T ss_pred CCEEEEECC-CCeEEEEECCCCh--hceEECCCCCccccccccccCCccceEEE--CCEEEEEcC-CCEEEEEECCCCCE
Confidence 678888764 3567777765442 11222111 00 013567886 788998763 5789999874 554
Q ss_pred e
Q psy13635 151 R 151 (357)
Q Consensus 151 ~ 151 (357)
+
T Consensus 140 ~ 140 (668)
T 1kv9_A 140 I 140 (668)
T ss_dssp E
T ss_pred e
Confidence 3
No 318
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=83.99 E-value=22 Score=31.32 Aligned_cols=260 Identities=9% Similarity=-0.031 Sum_probs=130.8
Q ss_pred CCeEEEEEeCCcEEEEEcCCCCcceEeccC----CCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCC
Q psy13635 40 AAQMLLFATSKDIRIANLSRPLKPVTIIKD----LEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 40 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
+...++..+...|.+- .+++...+.+... .....+|.+++ +.+|.+. ..+.|++ +.||.. ..+.+...
T Consensus 46 ~~~~~~~G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g-~~g~i~~-S~DgG~---tW~~~~~~ 117 (327)
T 2xbg_A 46 RHHGWLVGVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVG-EPPIMLH-TTDGGQ---SWSQIPLD 117 (327)
T ss_dssp SSCEEEEETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEE-ETTEEEE-ESSTTS---SCEECCCC
T ss_pred CCcEEEEcCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEE-CCCeEEE-ECCCCC---CceECccc
Confidence 3333334444445543 4444455554321 22467888874 6777663 2356776 556543 13333322
Q ss_pred --c-CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEE
Q psy13635 116 --L-ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYW 192 (357)
Q Consensus 116 --~-~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~ 192 (357)
+ ..+.+|++.. .+.+|.+.. .+.|++..=.|..=+.+. .+.. ....++++++ .+.+|.
T Consensus 118 ~~~~~~~~~i~~~~-~~~~~~~~~-~g~v~~S~DgG~tW~~~~-~~~~---------------~~~~~~~~~~-~~~~~~ 178 (327)
T 2xbg_A 118 PKLPGSPRLIKALG-NGSAEMITN-VGAIYRTKDSGKNWQALV-QEAI---------------GVMRNLNRSP-SGEYVA 178 (327)
T ss_dssp TTCSSCEEEEEEEE-TTEEEEEET-TCCEEEESSTTSSEEEEE-CSCC---------------CCEEEEEECT-TSCEEE
T ss_pred cCCCCCeEEEEEEC-CCCEEEEeC-CccEEEEcCCCCCCEEee-cCCC---------------cceEEEEEcC-CCcEEE
Confidence 1 3456777653 567777654 456666433343333332 1110 1235677775 455555
Q ss_pred EeCCCCeEEEEEcC-CCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecCCCceEEEeeCC-CC---Cce
Q psy13635 193 TDTGTDRIEVCRLE-GTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLNGGERVLLVKDR-LG---WPN 267 (357)
Q Consensus 193 td~~~~~I~~~~~~-g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~dg~~~~~~~~~~-l~---~P~ 267 (357)
... .+.+++..-. |..-+.+....-.....+++++. +.+|.+... +.+++...|+......+... +. ...
T Consensus 179 ~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~-g~~~~~~~~---G~~~~s~~D~G~tW~~~~~~~~~~~~~~~ 253 (327)
T 2xbg_A 179 VSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPD-GRLWMIVNG---GKIAFSDPDNSENWGELLSPLRRNSVGFL 253 (327)
T ss_dssp EET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTT-SCEEEEETT---TEEEEEETTEEEEECCCBCTTSSCCSCEE
T ss_pred EEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCC-CCEEEEeCC---ceEEEecCCCCCeeEeccCCcccCCcceE
Confidence 443 3567776544 44333332222345678888864 778777654 46766655533222222111 11 235
Q ss_pred EEEEecCCCEEEEEeCCCCeEEEEeCCCCCeEEEecC-CC-CceEEEEEE-CCEEEEEeCCCCeEEEEeC
Q psy13635 268 GITLDVDNEKLYWCDAKTDKIEMIDFDGNNRRELINE-NL-PHVFGISLL-GDYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 268 giaid~~~~~lY~~d~~~~~I~~~~~dG~~~~~i~~~-~~-~~p~gia~~-~~~ly~td~~~~~I~~~~~ 334 (357)
+++.+ .++.+|.+-. .+.+++..-.|..=+.+... .. .....+++. ++.+|.. ...+.|++.+.
T Consensus 254 ~v~~~-~~~~~~~~g~-~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~-G~~G~i~~~~~ 320 (327)
T 2xbg_A 254 DLAYR-TPNEVWLAGG-AGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFIL-GQKGILLRYVT 320 (327)
T ss_dssp EEEES-SSSCEEEEES-TTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEE-CSTTEEEEECC
T ss_pred EEEec-CCCEEEEEeC-CCeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEE-cCCceEEEEcC
Confidence 66665 3677877754 45565543334433333211 11 234567664 5555444 45678877764
No 319
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=80.92 E-value=43 Score=32.55 Aligned_cols=32 Identities=22% Similarity=0.107 Sum_probs=23.6
Q ss_pred eEEEEcCCCeEEEEeCC---------------CCEEEEEEcCCCceE
Q psy13635 121 GLAIDWLTEKLYWTDSE---------------TNKLEVSSLDGKKRK 152 (357)
Q Consensus 121 glavd~~~~~ly~td~~---------------~~~I~~~~~~g~~~~ 152 (357)
.+++|+..+.||+...+ .+.|..++.+.....
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~ 291 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK 291 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee
Confidence 47899989999997654 257888888755443
No 320
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=77.80 E-value=61 Score=32.56 Aligned_cols=231 Identities=13% Similarity=0.078 Sum_probs=117.9
Q ss_pred CCcEEEEEcCCCCcceEeccC-------CCcEEEEEEEccC-CEEEEEeCC-C----CeEEEEEcCCCCcceeEEEEeCC
Q psy13635 49 SKDIRIANLSRPLKPVTIIKD-------LEEGAAIDYYYKK-SMVCWTDHG-T----EMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~-------~~~~~~i~~d~~~-~~ly~~d~~-~----~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
...|++-+= ++...+.+... .....+|++++.+ +.+|.+-.. . ..|++..=.|.. .+.+..+
T Consensus 36 ~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~T----W~~~~~~ 110 (789)
T 1sqj_A 36 IGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQS----FTIYESP 110 (789)
T ss_dssp SSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSE----EEEEECS
T ss_pred CCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCc----ceeccCC
Confidence 456777653 33555554432 2358899999854 567776432 2 567766444432 4433332
Q ss_pred cC---------CceeEEEEcCCC-eEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeC
Q psy13635 116 LI---------TPDGLAIDWLTE-KLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDW 185 (357)
Q Consensus 116 ~~---------~p~glavd~~~~-~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~ 185 (357)
+. ....|++++... .+|... ..+.|++..=.|..=+.+. . . |. + .... .....|++|+
T Consensus 111 ~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~S~DgG~TW~~~~-~-~--~~-~-----~~~~-~~~~~i~~~p 178 (789)
T 1sqj_A 111 FPMGANDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWKSSDRAKTWTNVT-S-I--PD-A-----FTNG-IGYTSVIFDP 178 (789)
T ss_dssp SCCCTTSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEEESSTTSSCEEET-T-S--CC-C-----CSTT-TCEEEEEECT
T ss_pred cccCccCCCccceeEEEEcCCCCCEEEEEe-ccCCEEEECCCCcccCCCc-c-C--cc-c-----cCCC-CCeEEEEECC
Confidence 21 235799997654 455543 3355665433333223221 1 0 00 0 0000 1234678887
Q ss_pred CC-CeEEEEeCCCCeEEEEEcCCCceEEEecC--C--------C-------CCceEEEEeCCCCEEEEEeCC------CC
Q psy13635 186 VA-RNLYWTDTGTDRIEVCRLEGTHRKVLVNT--D--------L-------VEPRAITLSPAHGYLFWSDWN------EK 241 (357)
Q Consensus 186 ~~-~~lY~td~~~~~I~~~~~~g~~~~~~~~~--~--------~-------~~P~giavd~~~g~Ly~~d~~------~~ 241 (357)
.+ +.||++......|++..-.|+.=+.+... . + ..|..++++|..+.||.+-.. ..
T Consensus 179 ~~~~~~~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~ 258 (789)
T 1sqj_A 179 ERNGTIYASATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVT 258 (789)
T ss_dssp TSTTCEEEEESSTTCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCC
T ss_pred CCCCEEEEEEcCCCeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCC
Confidence 55 47887765435677754334432222210 0 1 223888999877899988421 01
Q ss_pred CCeEEEEecCCCceEEEeeC-CC---------C----CceEEEEecCC-CEEEEEeCCC------CeEEEEeCCCC
Q psy13635 242 RPKIERSLLNGGERVLLVKD-RL---------G----WPNGITLDVDN-EKLYWCDAKT------DKIEMIDFDGN 296 (357)
Q Consensus 242 ~~~I~~~~~dg~~~~~~~~~-~l---------~----~P~giaid~~~-~~lY~~d~~~------~~I~~~~~dG~ 296 (357)
.+.|++..-.|..=+.+... .. . .-.+|++++.+ +.||++-... +.|++..-.|.
T Consensus 259 ~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~~~~~l~~S~DgG~ 334 (789)
T 1sqj_A 259 FGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLSTDAGA 334 (789)
T ss_dssp CCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCSSCCCEEEESSTTS
T ss_pred CceEEEEeCCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCcccccEEEecCCCC
Confidence 36888877555433332210 10 0 11478888643 5688765321 56766654443
No 321
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=74.20 E-value=71 Score=31.49 Aligned_cols=64 Identities=13% Similarity=0.098 Sum_probs=37.6
Q ss_pred CCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeC-Cc---------CCceeEEEEcCCCeEEEEeCCCCEEEEEEcC-CCc
Q psy13635 82 KSMVCWTDHGTEMISCCTFDGNNVGSKHNVITN-GL---------ITPDGLAIDWLTEKLYWTDSETNKLEVSSLD-GKK 150 (357)
Q Consensus 82 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-~~---------~~p~glavd~~~~~ly~td~~~~~I~~~~~~-g~~ 150 (357)
++.||++.. .+.|+.++...+. +....-.. .. ....+++++ +++||+... .+++..++.. |+.
T Consensus 70 ~g~vyv~~~-~~~v~AlD~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~v~v~~~-dg~l~AlDa~TG~~ 143 (689)
T 1yiq_A 70 DGVMYTTGP-FSVVYALDARDGR--LIWKYDPQSDRHRAGEACCDAVNRGVAVW--KGKVYVGVL-DGRLEAIDAKTGQR 143 (689)
T ss_dssp TTEEEEECG-GGCEEEEETTTCC--EEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCE
T ss_pred CCEEEEEcC-CCeEEEEECCCCc--eeEEEcCCCCccccccccccCCCCccEEE--CCEEEEEcc-CCEEEEEECCCCCE
Confidence 688888754 3568888875442 12222111 00 012456776 788998764 5789988874 544
Q ss_pred e
Q psy13635 151 R 151 (357)
Q Consensus 151 ~ 151 (357)
+
T Consensus 144 ~ 144 (689)
T 1yiq_A 144 A 144 (689)
T ss_dssp E
T ss_pred e
Confidence 3
No 322
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=70.25 E-value=1.9 Score=39.14 Aligned_cols=138 Identities=14% Similarity=0.026 Sum_probs=52.3
Q ss_pred CCeEEEEeCCCCeEEEEEc-CCCceEEEecC--C--CCCceEEEEeCCCCEEEEEeCCCCCCeEEEEecC-CCceEEEee
Q psy13635 187 ARNLYWTDTGTDRIEVCRL-EGTHRKVLVNT--D--LVEPRAITLSPAHGYLFWSDWNEKRPKIERSLLN-GGERVLLVK 260 (357)
Q Consensus 187 ~~~lY~td~~~~~I~~~~~-~g~~~~~~~~~--~--~~~P~giavd~~~g~Ly~~d~~~~~~~I~~~~~d-g~~~~~~~~ 260 (357)
++.+|++....+.|...+. +|+........ . ...|. +. .++.||+.... +.+...+.. |......-.
T Consensus 48 ~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~---~~-~~~~v~~g~~d---g~v~a~D~~tG~~~w~~~~ 120 (369)
T 2hz6_A 48 EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPC---RS-SDGILYMGKKQ---DIWYVIDLLTGEKQQTLSS 120 (369)
T ss_dssp --CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSC---C------CCCCEEE---EEEEEECCC----------
T ss_pred CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCce---Ee-cCCEEEEEeCC---CEEEEEECCCCcEEEEecC
Confidence 4567777666677888777 45443222110 0 01221 11 23556654432 356666654 322222111
Q ss_pred CCCCCceEEEEecCCCEEEEEeCCCCeEEEEeC-CCCCeEEEecCCCCceEEEEEEC-----CEEEEEeCCCCeEEEEeC
Q psy13635 261 DRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDF-DGNNRRELINENLPHVFGISLLG-----DYVYWTDWQRRSIDRVNK 334 (357)
Q Consensus 261 ~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~-dG~~~~~i~~~~~~~p~gia~~~-----~~ly~td~~~~~I~~~~~ 334 (357)
+......+.++.||+... .+.|..++. +|..+-.+-... ....++.+ +.+|+... .+.|+.++.
T Consensus 121 -----~~~~~~~p~~~~v~~~~~-dg~v~a~d~~tG~~~W~~~~~~---~~~~~~~~~~~~~~~v~~~~~-dg~v~a~d~ 190 (369)
T 2hz6_A 121 -----AFADSLSPSTSLLYLGRT-EYTITMYDTKTRELRWNATYFD---YAASLPEDDVDYKMSHFVSNG-DGLVVTVDS 190 (369)
T ss_dssp -----------------EEEEEE-EEEEECCCSSSSSCCCEEEEEE---ECCBCCCCCTTCCCCEEEEET-SCEEEEECT
T ss_pred -----CCcccccccCCEEEEEec-CCEEEEEECCCCCEEEeEeccc---ccCccccCCccccceEEEECC-CCEEEEEEC
Confidence 111122225677777643 356777776 344321111000 01122222 56676653 467777777
Q ss_pred ccCceeE
Q psy13635 335 ITGNDRE 341 (357)
Q Consensus 335 ~~g~~~~ 341 (357)
.+|+..-
T Consensus 191 ~tG~~~W 197 (369)
T 2hz6_A 191 ESGDVLW 197 (369)
T ss_dssp TTCCEEE
T ss_pred CCCcEEE
Confidence 6676543
No 323
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=63.76 E-value=87 Score=28.47 Aligned_cols=169 Identities=10% Similarity=0.015 Sum_probs=86.5
Q ss_pred EEeecCCCCeEEEEEeCCcEEEEEcCCC----------CcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCC
Q psy13635 33 YALSHHVAAQMLLFATSKDIRIANLSRP----------LKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDG 102 (357)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g 102 (357)
+.++.++....++.++...+...++..- .......+ +..+..|+| ++..|+++ .++.|..+++..
T Consensus 41 nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~V~~l~f--d~~~L~v~--~~~~l~v~dv~s 115 (388)
T 1xip_A 41 QNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKE-IPDVIFVCF--HGDQVLVS--TRNALYSLDLEE 115 (388)
T ss_dssp BCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEE-CTTEEEEEE--ETTEEEEE--ESSEEEEEESSS
T ss_pred cEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEee-CCCeeEEEE--CCCEEEEE--cCCcEEEEEchh
Confidence 3345555566666666667766664321 11112223 334899999 67899988 457888888766
Q ss_pred CCcceeEEEEeCCcCCceeEEEEcCCCeEEEEeCCCCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEE
Q psy13635 103 NNVGSKHNVITNGLITPDGLAIDWLTEKLYWTDSETNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVA 182 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~p~glavd~~~~~ly~td~~~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~gla 182 (357)
... ........ ..... +-+...++..+ ..++.|.+.++.......+. .....++
T Consensus 116 l~~--~~~~~~~~-~~v~~--i~~~~p~~av~-~~dG~L~v~dl~~~~~~~~~--------------------~~Vs~v~ 169 (388)
T 1xip_A 116 LSE--FRTVTSFE-KPVFQ--LKNVNNTLVIL-NSVNDLSALDLRTKSTKQLA--------------------QNVTSFD 169 (388)
T ss_dssp TTC--EEEEEECS-SCEEE--EEECSSEEEEE-ETTSEEEEEETTTCCEEEEE--------------------ESEEEEE
T ss_pred hhc--cCccceee-cceee--EEecCCCEEEE-ECCCCEEEEEccCCcccccc--------------------CCceEEE
Confidence 541 11111111 11222 22333344443 34678888887644333221 1234444
Q ss_pred EeCCCCeEEEEeCCCCeEEEEEcCCCce---EEEe-----cC---CCCCceEEEEeCCCCEEEEE
Q psy13635 183 VDWVARNLYWTDTGTDRIEVCRLEGTHR---KVLV-----NT---DLVEPRAITLSPAHGYLFWS 236 (357)
Q Consensus 183 vD~~~~~lY~td~~~~~I~~~~~~g~~~---~~~~-----~~---~~~~P~giavd~~~g~Ly~~ 236 (357)
..+.+ +.+ -..++.|...++++... ..+. .+ .-.++.+|..-+. +...++
T Consensus 170 WSpkG--~~v-g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~-~~flv~ 230 (388)
T 1xip_A 170 VTNSQ--LAV-LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP-QDFLAV 230 (388)
T ss_dssp ECSSE--EEE-EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS-SEEEEE
T ss_pred EcCCc--eEE-EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC-CeEEEE
Confidence 44333 333 33346777778887663 3331 11 1245666776653 443333
No 324
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=61.23 E-value=1.4e+02 Score=29.85 Aligned_cols=198 Identities=18% Similarity=0.076 Sum_probs=99.1
Q ss_pred EEEEEEEccCCEEEEEeCC--CCeEEEEEcCCCCcceeEEEEeCCcCC-ceeEEEEcCCCe-EEEEeCCCCEEEEEEcCC
Q psy13635 73 GAAIDYYYKKSMVCWTDHG--TEMISCCTFDGNNVGSKHNVITNGLIT-PDGLAIDWLTEK-LYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 73 ~~~i~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~-p~glavd~~~~~-ly~td~~~~~I~~~~~~g 148 (357)
...+++++.+..+.|+-.. +..|++..-.|.. .+.+ .++.. -..+++|+.+.+ +|..+ .+.|++. .||
T Consensus 546 ~~~i~v~~~~~~~~~~~~~~~~~~v~~S~D~G~t----W~~~-~~l~~~~~~i~~d~~~~~~~y~g~--~g~v~~S-~Dg 617 (763)
T 3a0f_A 546 GGTIAVGADGKTFVWSPSKADGKGPYTSSDYGKT----WTAP-SGLSKQTTGIAADRVQANTFYVYV--EGDFFVS-TDG 617 (763)
T ss_dssp CCEEEECTTSSCEEEECSSCCSSCCEEESSTTSC----CBCC-BSCCCCCSCEEECSSSTTCEEEEE--TTEEEEE-SST
T ss_pred cceEEEecCCCcEEEEecccCCCceEEeCCCCCC----Ceec-CCCCCCcceEEEeccCCCEEEEEc--CCCEEEE-eCC
Confidence 4455666655555555442 3467665444443 3333 23322 246788876544 55553 5677764 454
Q ss_pred Cce-EEEEecCCCCcceeeeeccCcccccCCceEEEeC-CCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCC-Cc----
Q psy13635 149 KKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDW-VARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLV-EP---- 221 (357)
Q Consensus 149 ~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~-~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~-~P---- 221 (357)
... +.+ ...+. ... ..+.-|++++ ..+.||++-.+ +.|++.+-.|+.-+.+. .+. ..
T Consensus 618 G~tW~~~-~~~lp-----------~~~-~~~~~i~~~~~~~~~l~~~~~~-~~l~~S~D~G~tW~~~~--~~~~~~~~~~ 681 (763)
T 3a0f_A 618 GKSYTKK-GNGLP-----------CCW-TYTGTPVTSNLRAGELWVSVKG-VGIYHSTDFGNTFTALA--GSGSSLNPAV 681 (763)
T ss_dssp TSBCEEE-CBTSC-----------CSS-CCCEEEEECSSSTTCEEEEETT-TEEEEESSTTSBCEECT--TBTTTBEEEE
T ss_pred CcCcccc-ccCCC-----------ccc-CccccEEECCCCCCcEEEEcCC-CeEEEEcCCCCCceEcc--CCCcccccce
Confidence 332 222 11111 000 0011166665 56788887654 36777665555444432 121 11
Q ss_pred e--EEEEe-CCCCEEEEEe--CCCCCCeEEEEecCCCceEEEee--CCCCCceEEEEecCC-CEEEEEeCCCCeEEEEeC
Q psy13635 222 R--AITLS-PAHGYLFWSD--WNEKRPKIERSLLNGGERVLLVK--DRLGWPNGITLDVDN-EKLYWCDAKTDKIEMIDF 293 (357)
Q Consensus 222 ~--giavd-~~~g~Ly~~d--~~~~~~~I~~~~~dg~~~~~~~~--~~l~~P~giaid~~~-~~lY~~d~~~~~I~~~~~ 293 (357)
. ++++. +....||++- .......|++..=.|..=+.+-. ..+..+..|++|+.+ ++||++-.+. .|+..++
T Consensus 682 ~~~g~~~~~~~~~~l~~~G~~~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~i~~~p~~~~~v~~~T~Gr-Gi~~g~~ 760 (763)
T 3a0f_A 682 FSIGAPQTPNATETLFLWGIPSASQPEGLYMSTDNGGLWTRLNDDAHNYGGATVISGDPRIYGRVYIGMNGR-GIICAQA 760 (763)
T ss_dssp EEEECCSSTTSSCEEEEEEECSTTSCSEEEEESSTTSCCEECSCTTCCTBCEEEEEECTTSTTEEEEEEBSS-CEEEEES
T ss_pred eEEeeecCCCCCceEEEEEEcccCCCcEEEEeCCCCCCcEeccCccccCCCcceEEeCCCCCCEEEEeCCCC-eEEEEec
Confidence 1 22222 2245788865 11112578777755544344322 233444578998754 6799987655 4555655
Q ss_pred CC
Q psy13635 294 DG 295 (357)
Q Consensus 294 dG 295 (357)
.|
T Consensus 761 ~~ 762 (763)
T 3a0f_A 761 LG 762 (763)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 325
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=60.32 E-value=86 Score=27.29 Aligned_cols=241 Identities=11% Similarity=0.037 Sum_probs=120.2
Q ss_pred CcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCCcceeEEEEeCCc----CCceeEEEEcCCCeEEEEeCCCCEEEEEEc
Q psy13635 71 EEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNNVGSKHNVITNGL----ITPDGLAIDWLTEKLYWTDSETNKLEVSSL 146 (357)
Q Consensus 71 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~~----~~p~glavd~~~~~ly~td~~~~~I~~~~~ 146 (357)
....+|++.. .+.+|.+.. .+.|++. .||.. ..+.+.... ....+|++++ +.+|.+. ..+.|++ +.
T Consensus 36 ~~~~~v~~~~-~~~~~~~G~-~g~i~~s-~DgG~---tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g-~~g~i~~-S~ 105 (327)
T 2xbg_A 36 ATILDMSFID-RHHGWLVGV-NATLMET-RDGGQ---TWEPRTLVLDHSDYRFNSVSFQG--NEGWIVG-EPPIMLH-TT 105 (327)
T ss_dssp SCEEEEEESS-SSCEEEEET-TTEEEEE-SSTTS---SCEECCCCCSCCCCEEEEEEEET--TEEEEEE-ETTEEEE-ES
T ss_pred CcEEEEEECC-CCcEEEEcC-CCeEEEe-CCCCC---CCeECCCCCCCCCccEEEEEecC--CeEEEEE-CCCeEEE-EC
Confidence 3567777753 455555433 3566664 55542 133332211 1346788874 6777663 3456766 55
Q ss_pred CCCce-EEEEecCCCCcceeeeeccCcccccCCceEEEeCCCCeEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEE
Q psy13635 147 DGKKR-KVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDWVARNLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAIT 225 (357)
Q Consensus 147 ~g~~~-~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~~~~~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~gia 225 (357)
||... +.+.... .. -..+.+|++. ..+.+|.+.. .+.|++..-.|..=+.+.........+++
T Consensus 106 DgG~tW~~~~~~~-~~-------------~~~~~~i~~~-~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~~~~~~~~~ 169 (327)
T 2xbg_A 106 DGGQSWSQIPLDP-KL-------------PGSPRLIKAL-GNGSAEMITN-VGAIYRTKDSGKNWQALVQEAIGVMRNLN 169 (327)
T ss_dssp STTSSCEECCCCT-TC-------------SSCEEEEEEE-ETTEEEEEET-TCCEEEESSTTSSEEEEECSCCCCEEEEE
T ss_pred CCCCCceECcccc-CC-------------CCCeEEEEEE-CCCCEEEEeC-CccEEEEcCCCCCCEEeecCCCcceEEEE
Confidence 54322 2221100 00 0124556654 3467777654 35677765445543443332233567888
Q ss_pred EeCCCCEEEEEeCCCCCCeEEEEecC-CCceEEEeeCCCCCceEEEEecCCCEEEEEeCCCCeEEEEeCC-CCCeEEEec
Q psy13635 226 LSPAHGYLFWSDWNEKRPKIERSLLN-GGERVLLVKDRLGWPNGITLDVDNEKLYWCDAKTDKIEMIDFD-GNNRRELIN 303 (357)
Q Consensus 226 vd~~~g~Ly~~d~~~~~~~I~~~~~d-g~~~~~~~~~~l~~P~giaid~~~~~lY~~d~~~~~I~~~~~d-G~~~~~i~~ 303 (357)
+++. +.+|.+... +.+++..-+ |..-+.+-...-.....++++ .++++|.+.. .+.+++...| |..-+.+..
T Consensus 170 ~~~~-~~~~~~g~~---G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~-~~g~~~~~~~-~G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 170 RSPS-GEYVAVSSR---GSFYSTWEPGQTAWEPHNRTTSRRLHNMGFT-PDGRLWMIVN-GGKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp ECTT-SCEEEEETT---SSEEEEECTTCSSCEEEECCSSSCEEEEEEC-TTSCEEEEET-TTEEEEEETTEEEEECCCBC
T ss_pred EcCC-CcEEEEECC---CcEEEEeCCCCCceeECCCCCCCccceeEEC-CCCCEEEEeC-CceEEEecCCCCCeeEeccC
Confidence 8874 666665543 477777644 343333322222345678887 4667776654 4566665445 322111111
Q ss_pred CCC---CceEEEEEE-CCEEEEEeCCCCeEEEEeCccCceeEEEec
Q psy13635 304 ENL---PHVFGISLL-GDYVYWTDWQRRSIDRVNKITGNDREVIIE 345 (357)
Q Consensus 304 ~~~---~~p~gia~~-~~~ly~td~~~~~I~~~~~~~g~~~~~i~~ 345 (357)
..+ ....+++.. ++.+|.+.. .+.|++- ...|+.-+.+..
T Consensus 244 ~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~~S-~DgG~tW~~~~~ 287 (327)
T 2xbg_A 244 PLRRNSVGFLDLAYRTPNEVWLAGG-AGALLCS-QDGGQTWQQDVD 287 (327)
T ss_dssp TTSSCCSCEEEEEESSSSCEEEEES-TTCEEEE-SSTTSSCEECGG
T ss_pred CcccCCcceEEEEecCCCEEEEEeC-CCeEEEe-CCCCcccEEcCc
Confidence 101 123455554 466777654 3556433 334666555543
No 326
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=58.43 E-value=1.5e+02 Score=29.40 Aligned_cols=235 Identities=15% Similarity=0.050 Sum_probs=118.5
Q ss_pred CCcEEEEEcCCCCcceEeccCC-------CcEEEEEEEc-cCCEEEEEeCC--------CCeEEEEEcCCCCcceeEEEE
Q psy13635 49 SKDIRIANLSRPLKPVTIIKDL-------EEGAAIDYYY-KKSMVCWTDHG--------TEMISCCTFDGNNVGSKHNVI 112 (357)
Q Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~-------~~~~~i~~d~-~~~~ly~~d~~--------~~~I~~~~~~g~~~~~~~~~~ 112 (357)
...++|.+-.| ...+.+...+ ....+|++|+ ..+.||++-.. ...|++..=.|.. .+.+
T Consensus 44 ~ggv~rS~D~G-~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~T----W~~~ 118 (737)
T 2cn3_A 44 IGGAYRWDPST-ETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGET----WEKT 118 (737)
T ss_dssp SSCEEEEETTT-TEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSS----CEEE
T ss_pred CCcEEEeCCCC-CCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCC----cccC
Confidence 45688776434 5555544322 3477999998 45788887532 3467765544443 3333
Q ss_pred eCCcC---------CceeEEEEcCC-CeEEEEeCCCCEEEEEEcCCC-ceEEEEecCCCCcceeeeeccCc----ccccC
Q psy13635 113 TNGLI---------TPDGLAIDWLT-EKLYWTDSETNKLEVSSLDGK-KRKVLYWEDIDQPRAIASYKLPT----IEVEH 177 (357)
Q Consensus 113 ~~~~~---------~p~glavd~~~-~~ly~td~~~~~I~~~~~~g~-~~~~~~~~~~~~p~~i~~~~~~~----~~~~~ 177 (357)
...+. ....|++|+.+ +.||........|++ +.||. .=+.+. .+... +... .-|. .....
T Consensus 119 ~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~-S~DgG~tW~~~~--~~~~~-~~~~-~~p~~~~~~~~~g 193 (737)
T 2cn3_A 119 ILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWR-STDYGVTWSKVE--SFPNP-GTYI-YDPNFDYTKDIIG 193 (737)
T ss_dssp ECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEE-ESSTTSSCEECT--TCCCC-CCCB-SCTTSTTTCSBCC
T ss_pred CCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEE-eCCCCcceeccc--CCCCC-cccc-cCcccccccCCCC
Confidence 22221 12579999865 566665422245664 44443 222211 11000 0000 0000 00011
Q ss_pred CceEEEeCCC-------CeEEEEeCCC-CeEEEEEcCCCceEEEecCCC---CCceEEEEeCCCCEEEEEeCCC------
Q psy13635 178 PDGVAVDWVA-------RNLYWTDTGT-DRIEVCRLEGTHRKVLVNTDL---VEPRAITLSPAHGYLFWSDWNE------ 240 (357)
Q Consensus 178 p~glavD~~~-------~~lY~td~~~-~~I~~~~~~g~~~~~~~~~~~---~~P~giavd~~~g~Ly~~d~~~------ 240 (357)
...+++|+.+ +.||++.... ..|++..-.|..=+. +. .+ ..|..++++| .+.||++-...
T Consensus 194 ~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~-~~-~~p~~~~~~~~~~~~-~~~l~~~~~d~~g~y~~ 270 (737)
T 2cn3_A 194 VVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKA-VP-GQPKGLLPHHGVLAS-NGMLYITYGDTCGPYDG 270 (737)
T ss_dssp EEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEE-CT-TCCCSSEEEEEEECT-TSEEEEEEESSCCSSCC
T ss_pred EEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEE-CC-CCCCcccceEEEECC-CCeEEEEecCCCCcccc
Confidence 2347788654 4899886543 357776433433222 22 21 2345567887 58999874210
Q ss_pred -CCCeEEEEecCCCceEEEeeCCC---CCc---eEEEEecCC-CEEEEEeCC----CCeEEEEeCCCC
Q psy13635 241 -KRPKIERSLLNGGERVLLVKDRL---GWP---NGITLDVDN-EKLYWCDAK----TDKIEMIDFDGN 296 (357)
Q Consensus 241 -~~~~I~~~~~dg~~~~~~~~~~l---~~P---~giaid~~~-~~lY~~d~~----~~~I~~~~~dG~ 296 (357)
..+.|++.+-.|..-+.+..... ..+ .+|++|+.+ +.||++... ...+++..-.|.
T Consensus 271 ~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~~~~~l~~S~DgG~ 338 (737)
T 2cn3_A 271 NGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWPDEYIFRSTDGGA 338 (737)
T ss_dssp SCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEECCCSSCCCEEEESSTTS
T ss_pred ccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecccCCCCccEEEeCCCCc
Confidence 13588888866655444422111 112 358888754 678887643 244666644443
No 327
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=57.59 E-value=42 Score=32.48 Aligned_cols=96 Identities=8% Similarity=-0.054 Sum_probs=70.3
Q ss_pred cEEEEEcCC----CCcceEeccCCCcEEEEEEEccCCEEEEEeCCCCeEEEEEcCCCC------c--cee--EEEEeCCc
Q psy13635 51 DIRIANLSR----PLKPVTIIKDLEEGAAIDYYYKKSMVCWTDHGTEMISCCTFDGNN------V--GSK--HNVITNGL 116 (357)
Q Consensus 51 ~i~~~~~~~----~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~g~~------~--~~~--~~~~~~~~ 116 (357)
.+..+|... ...++..++....|+|++++|++..++.+...+..+..++...-. . .+. ...+.-|
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G- 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG- 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-
Confidence 466788765 356777788888999999999999999999999998888876210 0 000 1111223
Q ss_pred CCceeEEEEcCCCeEEEEeCCCCEEEEEEcCC
Q psy13635 117 ITPDGLAIDWLTEKLYWTDSETNKLEVSSLDG 148 (357)
Q Consensus 117 ~~p~glavd~~~~~ly~td~~~~~I~~~~~~g 148 (357)
..|.-.++|. .++.|.+-.-..+|.+.+++.
T Consensus 378 lGPlHt~Fd~-~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFDG-RGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEECS-SSEEEEEETTTTEEEEEEHHH
T ss_pred CcccEEEECC-CCceEeeeeecceEEEEeccH
Confidence 3688999997 569999988888999988753
No 328
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=49.81 E-value=1.8e+02 Score=27.84 Aligned_cols=16 Identities=13% Similarity=0.044 Sum_probs=13.2
Q ss_pred ceEEEeCCCCeEEEEe
Q psy13635 179 DGVAVDWVARNLYWTD 194 (357)
Q Consensus 179 ~glavD~~~~~lY~td 194 (357)
.++++|+.++.+|+..
T Consensus 415 ~~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPA 430 (582)
T ss_dssp SCCEECTTTCCEEEEE
T ss_pred CCceECCCCCEEEEec
Confidence 3679999999999864
No 329
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=44.64 E-value=2.2e+02 Score=27.27 Aligned_cols=75 Identities=13% Similarity=0.126 Sum_probs=45.1
Q ss_pred EEEEecCCCEEEEEeC--------------------------------CCCeEEEEeCC-CCCeEEEecCCCCc-eEEEE
Q psy13635 268 GITLDVDNEKLYWCDA--------------------------------KTDKIEMIDFD-GNNRRELINENLPH-VFGIS 313 (357)
Q Consensus 268 giaid~~~~~lY~~d~--------------------------------~~~~I~~~~~d-G~~~~~i~~~~~~~-p~gia 313 (357)
++++|+..+.+|+... ..+.+..+|+. |+.+=..-. .... --.++
T Consensus 416 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~ 494 (582)
T 1flg_A 416 PMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE-HLPLWAGVLA 494 (582)
T ss_dssp CCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEE-SSCCCSCCEE
T ss_pred CceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecC-CCCCcccceE
Confidence 5788888888888642 23567778874 432211111 1111 11244
Q ss_pred EECCEEEEEeCCCCeEEEEeCccCceeEEEe
Q psy13635 314 LLGDYVYWTDWQRRSIDRVNKITGNDREVII 344 (357)
Q Consensus 314 ~~~~~ly~td~~~~~I~~~~~~~g~~~~~i~ 344 (357)
..++.+|+.+ ..+.++.+|..+|+.+-...
T Consensus 495 tagglvf~g~-~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 495 TAGNLVFTGT-GDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp ETTTEEEEEC-TTSEEEEEETTTCCEEEEEE
T ss_pred eCCCEEEEEC-CCCcEEEEECCCCCEEEEec
Confidence 4578888865 45788888888888776553
No 330
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=34.95 E-value=1.9e+02 Score=25.97 Aligned_cols=73 Identities=5% Similarity=0.058 Sum_probs=49.2
Q ss_pred eEEEEeCCCC--EEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCc-eEEEeCCCCeEEEEeCCCCeEEEEEcC
Q psy13635 130 KLYWTDSETN--KLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPD-GVAVDWVARNLYWTDTGTDRIEVCRLE 206 (357)
Q Consensus 130 ~ly~td~~~~--~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~-glavD~~~~~lY~td~~~~~I~~~~~~ 206 (357)
.||.-+...+ .|..++++......-+.-..+.|.++ ..+. ++-+- ..+.||+++....+|..++..
T Consensus 41 yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi----------~~~~~~~~i~-~~DsI~i~~~~~~~i~l~n~~ 109 (369)
T 3s9j_A 41 YLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGL----------PAVFGSRPSP-DSQYILVAQNNISRLSSINSQ 109 (369)
T ss_dssp EEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBC----------TTCCCEEESS-STTSEEEEEGGGTEEEEECTT
T ss_pred EEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCc----------ccceeeEEec-CCCEEEEEeCCcceEEEECCC
Confidence 5777777777 99999998776543333222344333 3453 34443 567899998887889999999
Q ss_pred CCceEEE
Q psy13635 207 GTHRKVL 213 (357)
Q Consensus 207 g~~~~~~ 213 (357)
|+....+
T Consensus 110 G~~~~k~ 116 (369)
T 3s9j_A 110 GEIIRNY 116 (369)
T ss_dssp CCEEEEE
T ss_pred ceEEEEE
Confidence 9877665
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=34.58 E-value=2.1e+02 Score=24.24 Aligned_cols=242 Identities=9% Similarity=-0.004 Sum_probs=118.9
Q ss_pred EEEEeCCcEEEEEcCCCCcceEe-cc--CCCcEEEEEEEccCCEEEEEeCC-----C------CeEEEEEcCCCCcceeE
Q psy13635 44 LLFATSKDIRIANLSRPLKPVTI-IK--DLEEGAAIDYYYKKSMVCWTDHG-----T------EMISCCTFDGNNVGSKH 109 (357)
Q Consensus 44 l~~~~~~~i~~~~~~~~~~~~~~-~~--~~~~~~~i~~d~~~~~ly~~d~~-----~------~~I~~~~~~g~~~~~~~ 109 (357)
|++-...++..+|.... ..... .+ ..+.-.+++. .+++||+.... . ..+++.++.... .
T Consensus 7 l~~~GG~~~~~yd~~~~-~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~----W 79 (315)
T 4asc_A 7 IFMISEEGAVAYDPAAN-ECYCASLSSQVPKNHVSLVT--KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE----W 79 (315)
T ss_dssp EEEEETTEEEEEETTTT-EEEEEECCCCSCSSEEEEEC--TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE----E
T ss_pred EEEEcCCceEEECCCCC-eEecCCCCCCCCccceEEEE--ECCEEEEEcCcccCCCCCccccccceEEecCCCCe----E
Confidence 33333466778887652 22221 11 1233344433 47888876441 1 126777776652 3
Q ss_pred EEEeCCcCCc---eeEEEEcCCCeEEEEeCC--------CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCC
Q psy13635 110 NVITNGLITP---DGLAIDWLTEKLYWTDSE--------TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHP 178 (357)
Q Consensus 110 ~~~~~~~~~p---~glavd~~~~~ly~td~~--------~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p 178 (357)
+.+. .+..| .++++. +++||+.-.. .+.+.++++....=+.+. .+..||. .
T Consensus 80 ~~~~-~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~------------~- 141 (315)
T 4asc_A 80 LGMP-PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD--PLPYVVY------------G- 141 (315)
T ss_dssp EECC-CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC--CCSSCCB------------S-
T ss_pred EECC-CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC--CCCCccc------------c-
Confidence 3332 22222 233333 7889987541 256788887654322221 1111111 1
Q ss_pred ceEEEeCCCCeEEEEeCC------CCeEEEEEcCCCceEEEecCCCCCce---EEEEeCCCCEEEEEeCCCC---CCeEE
Q psy13635 179 DGVAVDWVARNLYWTDTG------TDRIEVCRLEGTHRKVLVNTDLVEPR---AITLSPAHGYLFWSDWNEK---RPKIE 246 (357)
Q Consensus 179 ~glavD~~~~~lY~td~~------~~~I~~~~~~g~~~~~~~~~~~~~P~---giavd~~~g~Ly~~d~~~~---~~~I~ 246 (357)
...++ .+++||+.... .+.+++.++....=+.+. .+..|+ +.++. +++||+.--... ...++
T Consensus 142 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 215 (315)
T 4asc_A 142 HTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA--PMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAE 215 (315)
T ss_dssp CEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC--CCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEE
T ss_pred eeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC--CCCCchhceEEEEE--CCEEEEEeccCCCCccceEE
Confidence 22233 46789988654 247888888765433332 222222 33333 578998853321 13677
Q ss_pred EEecCCCceEEEeeCCCCCc---eEEEEecCCCEEEEEeCC--------------CCeEEEEeCCCCCeEEEecCCCCce
Q psy13635 247 RSLLNGGERVLLVKDRLGWP---NGITLDVDNEKLYWCDAK--------------TDKIEMIDFDGNNRRELINENLPHV 309 (357)
Q Consensus 247 ~~~~dg~~~~~~~~~~l~~P---~giaid~~~~~lY~~d~~--------------~~~I~~~~~dG~~~~~i~~~~~~~p 309 (357)
+.++....=..+. .+..| .++++ .+++||+.-.. .+.+++++++...=+.+.. .-..-
T Consensus 216 ~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~~r~~ 290 (315)
T 4asc_A 216 VYSITDNKWAPFE--AFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLR-EIAYA 290 (315)
T ss_dssp EEETTTTEEEEEC--CCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEES-CSSCC
T ss_pred EEECCCCeEEECC--CCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhcc-CCcCc
Confidence 8887655333332 22222 23343 47789986422 1346677776544333322 11222
Q ss_pred EEEEEECCEEEE
Q psy13635 310 FGISLLGDYVYW 321 (357)
Q Consensus 310 ~gia~~~~~ly~ 321 (357)
.+.++.++.+|+
T Consensus 291 ~~~~~~~~~l~v 302 (315)
T 4asc_A 291 AGATFLPVRLNV 302 (315)
T ss_dssp SSCEEEEEEECG
T ss_pred cceEEeCCEEEE
Confidence 334455555555
No 332
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=29.14 E-value=1.1e+02 Score=27.35 Aligned_cols=19 Identities=5% Similarity=-0.050 Sum_probs=10.2
Q ss_pred CCEEEEEe-CCCCeEEEEeC
Q psy13635 275 NEKLYWCD-AKTDKIEMIDF 293 (357)
Q Consensus 275 ~~~lY~~d-~~~~~I~~~~~ 293 (357)
++.+|+.+ ...++++.++.
T Consensus 55 ~~~~~vv~p~~dG~l~a~~~ 74 (339)
T 2be1_A 55 TYETLIIEPFGDGNIYYFNA 74 (339)
T ss_dssp SSEEEEECCSTTTEEEEEET
T ss_pred CCcEEEEEECCCCEEEEEEC
Confidence 34555555 35556666654
No 333
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=25.11 E-value=4.7e+02 Score=25.18 Aligned_cols=108 Identities=15% Similarity=0.279 Sum_probs=64.5
Q ss_pred EEEeCCCCeE--EE-EeCC-----------CCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeCCCCCCeEE
Q psy13635 181 VAVDWVARNL--YW-TDTG-----------TDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDWNEKRPKIE 246 (357)
Q Consensus 181 lavD~~~~~l--Y~-td~~-----------~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~~~~~~~I~ 246 (357)
.|+|+.+++| .| .+.. .+.+.+.|.||..+..++... .++|. +|.+.|+..-.+...+.
T Consensus 295 ~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs------~~iD~-dG~~L~st~~gHGDa~h 367 (591)
T 2zux_A 295 VAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGS------MAVDH-DGKGMYSTGLGHGDALH 367 (591)
T ss_dssp EEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETT------EEECT-TSCEEEECSCCCCSCEE
T ss_pred EEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEee------eEECC-CCCEeeeCCCCCCCeeE
Confidence 4667777765 44 3332 357888998887666555432 37785 57777776555545777
Q ss_pred EEecCCCc--eEEEe-eCCCCCceEEE-EecCCCEEEEEeCC---CCeEEEEeCCC
Q psy13635 247 RSLLNGGE--RVLLV-KDRLGWPNGIT-LDVDNEKLYWCDAK---TDKIEMIDFDG 295 (357)
Q Consensus 247 ~~~~dg~~--~~~~~-~~~l~~P~gia-id~~~~~lY~~d~~---~~~I~~~~~dG 295 (357)
..+++... .+++. .+.-..|.|.+ .|...|+++|.-.. .++-...+.|-
T Consensus 368 v~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp 423 (591)
T 2zux_A 368 TGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDP 423 (591)
T ss_dssp EECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCT
T ss_pred EeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCC
Confidence 78877543 23332 23223454553 46678888887643 35666665543
No 334
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=23.41 E-value=1.2e+02 Score=26.84 Aligned_cols=66 Identities=9% Similarity=0.121 Sum_probs=32.8
Q ss_pred CCCEEEEEeCCCCeEEEEeC-CCCCeEEEecCC-CCceEEEEEECCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 274 DNEKLYWCDAKTDKIEMIDF-DGNNRRELINEN-LPHVFGISLLGDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 274 ~~~~lY~~d~~~~~I~~~~~-dG~~~~~i~~~~-~~~p~gia~~~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
.++.||+... .+.|+.++. +|..+-..-... ...| .+.++.+|++....+.|+.++..+|+.....
T Consensus 8 ~~~~v~~gs~-dg~v~a~d~~tG~~~W~~~~~~~~s~p---~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 8 PETLLFVSTL-DGSLHAVSKRTGSIKWTLKEDPVLQVP---THVEEPAFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp CTTEEEEEET-TSEEEEEETTTCCEEEEEECCCSCCCC--------CCEEECTTTCCEEEC-----CCSEEC
T ss_pred eCCEEEEEcC-CCEEEEEECCCCCEEEEecCCCceecc---eEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence 4677777764 457777775 444332222111 1112 2345668888777788999998778765443
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=23.22 E-value=3.4e+02 Score=22.91 Aligned_cols=236 Identities=11% Similarity=0.034 Sum_probs=115.0
Q ss_pred CcEEEEEcCCCCcceE-ecc--CCCcEEEEEEEccCCEEEEEeCCC-----------CeEEEEEcCCCCcceeEEEEeCC
Q psy13635 50 KDIRIANLSRPLKPVT-IIK--DLEEGAAIDYYYKKSMVCWTDHGT-----------EMISCCTFDGNNVGSKHNVITNG 115 (357)
Q Consensus 50 ~~i~~~~~~~~~~~~~-~~~--~~~~~~~i~~d~~~~~ly~~d~~~-----------~~I~~~~~~g~~~~~~~~~~~~~ 115 (357)
.++..+|.... +... ..+ ..+.-.+++ ..+++||+..... ..+++.+..... ...+. .
T Consensus 24 ~~~~~yd~~~~-~W~~~~~~~~~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~----W~~~~-~ 95 (318)
T 2woz_A 24 TAAVAYDPMEN-ECYLTALAEQIPRNHSSIV--TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE----WVGLP-P 95 (318)
T ss_dssp SEEEEEETTTT-EEEEEEECTTSCSSEEEEE--CSSSCEEEEESSCC-------CCCBEEEEEETTTTE----EEECS-C
T ss_pred cceEEECCCCC-ceecccCCccCCccceEEE--EECCEEEEECCcccCccccCCCccccEEEEeCCCCc----EEECC-C
Confidence 44666776552 2222 111 222334443 3468888875521 126777776553 33332 2
Q ss_pred cCCc---eeEEEEcCCCeEEEEeCC-------CCEEEEEEcCCCceEEEEecCCCCcceeeeeccCcccccCCceEEEeC
Q psy13635 116 LITP---DGLAIDWLTEKLYWTDSE-------TNKLEVSSLDGKKRKVLYWEDIDQPRAIASYKLPTIEVEHPDGVAVDW 185 (357)
Q Consensus 116 ~~~p---~glavd~~~~~ly~td~~-------~~~I~~~~~~g~~~~~~~~~~~~~p~~i~~~~~~~~~~~~p~glavD~ 185 (357)
+..| .++++. +++||+.-.. .+.+.++++....=+.+. .+..||. . ...++
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~------------~-~~~~~-- 156 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK--NLPIKVY------------G-HNVIS-- 156 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC--CCSSCEE------------S-CEEEE--
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC--CCCCccc------------c-cEEEE--
Confidence 2222 234443 7889987532 145777777654333221 2211111 1 22333
Q ss_pred CCCeEEEEeCC------CCeEEEEEcCCCceEEEecCCCCCc---eEEEEeCCCCEEEEEeCCCC---CCeEEEEecCCC
Q psy13635 186 VARNLYWTDTG------TDRIEVCRLEGTHRKVLVNTDLVEP---RAITLSPAHGYLFWSDWNEK---RPKIERSLLNGG 253 (357)
Q Consensus 186 ~~~~lY~td~~------~~~I~~~~~~g~~~~~~~~~~~~~P---~giavd~~~g~Ly~~d~~~~---~~~I~~~~~dg~ 253 (357)
.+++||+.... .+.++++++....=..+. .+..| .+.++. +++||+.--... ...+++.+++..
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA--PMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC--CCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC--CCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 46799987542 246899998765443332 22222 234443 589998853211 135777777654
Q ss_pred ceEEEeeCCCCCc---eEEEEecCCCEEEEEeC--------------CCCeEEEEeCCCCCeEEEecCCCCceEEEEEEC
Q psy13635 254 ERVLLVKDRLGWP---NGITLDVDNEKLYWCDA--------------KTDKIEMIDFDGNNRRELINENLPHVFGISLLG 316 (357)
Q Consensus 254 ~~~~~~~~~l~~P---~giaid~~~~~lY~~d~--------------~~~~I~~~~~dG~~~~~i~~~~~~~p~gia~~~ 316 (357)
.=..+ ..+..| .++++ .+++||+.-. ..+.++++++....=+.+.. ......+.++.+
T Consensus 233 ~W~~~--~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~~r~~~~~~~~~ 307 (318)
T 2woz_A 233 KWEVM--TEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLK-EIRYASGASCLA 307 (318)
T ss_dssp CEEEC--CCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEEES-CCGGGTTCEEEE
T ss_pred eEEEC--CCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhhcc-cccccccceeeC
Confidence 33332 222222 23343 4688988632 13457777766543333321 122223344455
Q ss_pred CEEEE
Q psy13635 317 DYVYW 321 (357)
Q Consensus 317 ~~ly~ 321 (357)
+.+|+
T Consensus 308 ~~iyi 312 (318)
T 2woz_A 308 TRLNL 312 (318)
T ss_dssp EEEEG
T ss_pred CEEEE
Confidence 56654
No 336
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=22.44 E-value=2.2e+02 Score=25.62 Aligned_cols=67 Identities=16% Similarity=0.245 Sum_probs=46.3
Q ss_pred CEEEEEeCCCC--eEEEEeCCCCCeE-EEec-----CCCCceE-EEEE-ECCEEEEEeCCCCeEEEEeCccCceeEEE
Q psy13635 276 EKLYWCDAKTD--KIEMIDFDGNNRR-ELIN-----ENLPHVF-GISL-LGDYVYWTDWQRRSIDRVNKITGNDREVI 343 (357)
Q Consensus 276 ~~lY~~d~~~~--~I~~~~~dG~~~~-~i~~-----~~~~~p~-gia~-~~~~ly~td~~~~~I~~~~~~~g~~~~~i 343 (357)
..||.-+...+ .|..+|++-.... .+.- +++..+. ++-+ ..+.+|+++....+|+.++. .|+....+
T Consensus 40 ~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~-~G~~~~k~ 116 (369)
T 3s9j_A 40 EYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINS-QGEIIRNY 116 (369)
T ss_dssp EEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECT-TCCEEEEE
T ss_pred EEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECC-CceEEEEE
Confidence 46777788888 9999999765532 3322 2344553 4544 36889999988888999997 67766654
No 337
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=21.72 E-value=5.8e+02 Score=25.05 Aligned_cols=157 Identities=14% Similarity=0.001 Sum_probs=77.3
Q ss_pred CCeEEEEEcCCCCcceeEEEEeCCcCC-----ceeEEEEcCC-CeEEEEeCC-----CCEEEEEEcCCCceEEEEecCCC
Q psy13635 92 TEMISCCTFDGNNVGSKHNVITNGLIT-----PDGLAIDWLT-EKLYWTDSE-----TNKLEVSSLDGKKRKVLYWEDID 160 (357)
Q Consensus 92 ~~~I~~~~~~g~~~~~~~~~~~~~~~~-----p~glavd~~~-~~ly~td~~-----~~~I~~~~~~g~~~~~~~~~~~~ 160 (357)
.+.|+|..=.|.. .+.+...+.. ..+|++||.+ +.+|++-.. .+.|++..=.|..=+.+. ..
T Consensus 64 ~ggvyrS~DgG~T----W~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~-~p-- 136 (685)
T 3f6k_A 64 QSKLYRSEDYGKN----FKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTD-LP-- 136 (685)
T ss_dssp EEEEEEESSTTSS----CEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEE-CS--
T ss_pred CCeEEEEeCCCCC----ceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEecc-CC--
Confidence 3455555444443 4444333322 2479999854 478887642 456666443343323322 11
Q ss_pred CcceeeeeccCcccccCC-ceEEEeCCCC-eEEEEeCCCCeEEEEEcCCCceEEEecCCCCCceEEEEeCCCCEEEEEeC
Q psy13635 161 QPRAIASYKLPTIEVEHP-DGVAVDWVAR-NLYWTDTGTDRIEVCRLEGTHRKVLVNTDLVEPRAITLSPAHGYLFWSDW 238 (357)
Q Consensus 161 ~p~~i~~~~~~~~~~~~p-~glavD~~~~-~lY~td~~~~~I~~~~~~g~~~~~~~~~~~~~P~giavd~~~g~Ly~~d~ 238 (357)
..| ..|+++|.+. .||+.. ..+.+++..-.|..=+.+. ..+ ....+.. .+.+|+...
T Consensus 137 ---------------~~~~~~l~~~P~~~~~l~a~~-~~~gly~S~DgG~TW~~i~-~~v---~~~~f~~-~~~Iy~~~~ 195 (685)
T 3f6k_A 137 ---------------FHPLTQMMYSPQNSDYLLALS-TENGLWVSKNFGGKWEEIH-KAV---CLAKWGS-DNTIFFTTY 195 (685)
T ss_dssp ---------------SCBSSCCEEETTEEEEEEEEB-TTCCEEEESSTTSSEEEEE-SSE---EEEEECS-TTCEEEEEC
T ss_pred ---------------CCCceEEEEecCCCCEEEEEE-CCCCEEEEeCCCCCcEEee-cCc---cccccCC-CCeEEEEee
Confidence 022 2578887654 456554 3456777654454433332 222 2334443 367888753
Q ss_pred CCC-----CC--eEEEEecCCCceEEEeeCCCCCceEEEEecCCCEEEEEe
Q psy13635 239 NEK-----RP--KIERSLLNGGERVLLVKDRLGWPNGITLDVDNEKLYWCD 282 (357)
Q Consensus 239 ~~~-----~~--~I~~~~~dg~~~~~~~~~~l~~P~giaid~~~~~lY~~d 282 (357)
... .+ .|.+..-.|...+.+. ....++++ .++.|+++-
T Consensus 196 ~~~~~~~~~g~l~L~~S~D~g~t~~~l~----~~i~~f~~--~~~yl~va~ 240 (685)
T 3f6k_A 196 ANGSCKADLGALELWRTSDLGKSFKTIG----VKIYSFGL--GGRFLFASV 240 (685)
T ss_dssp SSSCTTTTTTSEEEEEESSTTSSCEEEE----EEEEEEEE--ETTEEEEEE
T ss_pred ccccccCCCCceEEEEecCCCCCceEee----ccceeeee--eeeEEEEEE
Confidence 321 11 2333333333333332 23456665 578888875
No 338
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=20.07 E-value=6.3e+02 Score=24.81 Aligned_cols=92 Identities=11% Similarity=-0.118 Sum_probs=48.9
Q ss_pred cEEEEEcCCCCcceEeccCCCc-----EEEEEEEccC-CEEEEEeCC-----CCeEEEEEcCCCCcceeEEEEeCCcCCc
Q psy13635 51 DIRIANLSRPLKPVTIIKDLEE-----GAAIDYYYKK-SMVCWTDHG-----TEMISCCTFDGNNVGSKHNVITNGLITP 119 (357)
Q Consensus 51 ~i~~~~~~~~~~~~~~~~~~~~-----~~~i~~d~~~-~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~p 119 (357)
.|+|-+ +++.+.+.+...... ..+|+++|.+ +++|++... .+.|++..=.|.. .+.+..+....
T Consensus 66 gvyrS~-DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~T----W~~~~~p~~~~ 140 (685)
T 3f6k_A 66 KLYRSE-DYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKN----FVQTDLPFHPL 140 (685)
T ss_dssp EEEEES-STTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSS----CEEEECSSCBS
T ss_pred eEEEEe-CCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCce----eEeccCCCCCc
Confidence 455533 334566665432222 2468888855 478888642 4677775544443 33333232212
Q ss_pred eeEEEEcCCC-eEEEEeCCCCEEEEEEcCCC
Q psy13635 120 DGLAIDWLTE-KLYWTDSETNKLEVSSLDGK 149 (357)
Q Consensus 120 ~glavd~~~~-~ly~td~~~~~I~~~~~~g~ 149 (357)
..|++++... .||+.. ..+.|++ +.||.
T Consensus 141 ~~l~~~P~~~~~l~a~~-~~~gly~-S~DgG 169 (685)
T 3f6k_A 141 TQMMYSPQNSDYLLALS-TENGLWV-SKNFG 169 (685)
T ss_dssp SCCEEETTEEEEEEEEB-TTCCEEE-ESSTT
T ss_pred eEEEEecCCCCEEEEEE-CCCCEEE-EeCCC
Confidence 3689987544 456554 3456666 44443
Done!