Query psy1364
Match_columns 401
No_of_seqs 371 out of 2693
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 16:28:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1364.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1364hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 9E-80 2E-84 595.4 29.4 308 87-401 2-342 (371)
2 PRK14296 chaperone protein Dna 100.0 6.2E-72 1.3E-76 555.1 32.7 308 88-401 3-353 (372)
3 PRK14288 chaperone protein Dna 100.0 1.2E-71 2.7E-76 552.8 31.5 307 88-401 2-337 (369)
4 PTZ00037 DnaJ_C chaperone prot 100.0 3.6E-70 7.7E-75 547.5 30.7 304 85-401 24-358 (421)
5 PRK14286 chaperone protein Dna 100.0 3.4E-69 7.4E-74 535.8 31.6 306 88-401 3-349 (372)
6 PRK14298 chaperone protein Dna 100.0 2.5E-68 5.5E-73 530.0 31.8 307 88-401 4-343 (377)
7 PRK14277 chaperone protein Dna 100.0 2.3E-68 5.1E-73 532.6 31.1 308 88-401 4-357 (386)
8 PRK14287 chaperone protein Dna 100.0 1.1E-67 2.3E-72 524.9 31.7 307 88-401 3-340 (371)
9 PRK14285 chaperone protein Dna 100.0 8.4E-68 1.8E-72 524.6 30.6 307 89-401 3-345 (365)
10 PRK14280 chaperone protein Dna 100.0 1.1E-67 2.5E-72 526.0 31.4 307 88-401 3-345 (376)
11 PRK14284 chaperone protein Dna 100.0 2E-67 4.4E-72 526.7 32.5 308 89-401 1-358 (391)
12 PRK14278 chaperone protein Dna 100.0 2.1E-67 4.6E-72 524.0 31.7 307 89-401 3-342 (378)
13 PRK14276 chaperone protein Dna 100.0 1.8E-67 3.8E-72 525.3 30.8 307 88-401 3-348 (380)
14 PRK14279 chaperone protein Dna 100.0 2.6E-67 5.7E-72 525.2 31.7 308 87-401 7-370 (392)
15 PRK14281 chaperone protein Dna 100.0 2.4E-67 5.3E-72 526.7 30.2 310 89-401 3-364 (397)
16 PRK14297 chaperone protein Dna 100.0 3.9E-67 8.4E-72 523.2 31.3 311 88-401 3-350 (380)
17 PRK14282 chaperone protein Dna 100.0 8.5E-67 1.8E-71 518.8 33.1 312 88-401 3-355 (369)
18 PRK14301 chaperone protein Dna 100.0 7.2E-67 1.6E-71 519.4 31.9 305 88-401 3-342 (373)
19 PRK14295 chaperone protein Dna 100.0 1.1E-66 2.3E-71 520.4 32.6 307 88-401 8-364 (389)
20 PRK14294 chaperone protein Dna 100.0 3.5E-66 7.6E-71 513.9 30.9 306 87-401 2-342 (366)
21 PRK10767 chaperone protein Dna 100.0 4.4E-66 9.6E-71 514.7 31.6 305 88-401 3-340 (371)
22 PRK14291 chaperone protein Dna 100.0 6.4E-66 1.4E-70 514.4 30.3 311 88-401 2-362 (382)
23 PRK14300 chaperone protein Dna 100.0 5.5E-65 1.2E-69 506.0 30.3 306 89-401 3-344 (372)
24 PRK14290 chaperone protein Dna 100.0 1.3E-64 2.9E-69 502.4 32.1 308 89-401 3-348 (365)
25 TIGR02349 DnaJ_bact chaperone 100.0 1.2E-64 2.5E-69 502.0 31.0 305 90-401 1-345 (354)
26 PRK14283 chaperone protein Dna 100.0 2E-64 4.4E-69 503.3 32.5 309 87-401 3-348 (378)
27 PRK14289 chaperone protein Dna 100.0 8.1E-64 1.8E-68 500.6 30.8 308 88-401 4-356 (386)
28 KOG0712|consensus 100.0 3.1E-64 6.7E-69 480.8 23.6 300 87-400 2-330 (337)
29 PRK14293 chaperone protein Dna 100.0 2.3E-63 5E-68 495.1 29.7 309 89-401 3-346 (374)
30 PRK14292 chaperone protein Dna 100.0 2.2E-62 4.8E-67 488.1 30.5 305 89-401 2-340 (371)
31 PRK14299 chaperone protein Dna 100.0 3E-58 6.5E-63 443.7 25.3 253 88-401 3-278 (291)
32 PRK10266 curved DNA-binding pr 100.0 7.5E-57 1.6E-61 437.2 25.7 271 88-401 3-285 (306)
33 KOG0713|consensus 100.0 3.4E-55 7.4E-60 413.3 8.3 312 85-397 12-328 (336)
34 TIGR03835 termin_org_DnaJ term 100.0 2.1E-42 4.6E-47 354.4 25.7 157 196-390 657-813 (871)
35 KOG0715|consensus 100.0 1.2E-32 2.6E-37 263.7 12.6 222 89-332 43-288 (288)
36 KOG0714|consensus 99.9 7.3E-23 1.6E-27 197.1 18.8 251 88-372 2-305 (306)
37 PF01556 CTDII: DnaJ C termina 99.9 4.1E-22 8.9E-27 156.0 7.2 80 321-401 1-80 (81)
38 KOG0721|consensus 99.8 1.1E-20 2.4E-25 168.4 6.1 130 10-159 40-169 (230)
39 KOG0716|consensus 99.8 1.5E-20 3.2E-25 173.1 5.4 75 87-161 29-103 (279)
40 KOG0691|consensus 99.8 1E-19 2.2E-24 173.3 3.5 74 88-161 4-77 (296)
41 KOG0718|consensus 99.8 2.6E-19 5.5E-24 174.9 5.9 78 85-162 5-85 (546)
42 PTZ00341 Ring-infected erythro 99.8 4.8E-19 1E-23 186.9 6.9 79 83-162 567-645 (1136)
43 COG2214 CbpA DnaJ-class molecu 99.8 1.3E-17 2.9E-22 153.5 14.0 188 87-322 4-227 (237)
44 KOG0717|consensus 99.7 1.1E-18 2.5E-23 170.4 5.8 77 85-161 4-81 (508)
45 PF00226 DnaJ: DnaJ domain; I 99.7 2.6E-18 5.7E-23 128.2 5.3 63 90-152 1-64 (64)
46 KOG0719|consensus 99.7 1.7E-17 3.7E-22 149.3 5.7 72 86-157 11-84 (264)
47 KOG0624|consensus 99.7 3.6E-17 7.8E-22 155.3 7.5 90 85-175 390-483 (504)
48 PHA03102 Small T antigen; Revi 99.7 2.2E-17 4.8E-22 142.9 4.3 68 89-160 5-74 (153)
49 smart00271 DnaJ DnaJ molecular 99.6 3E-16 6.4E-21 115.4 5.9 59 89-147 1-60 (60)
50 cd06257 DnaJ DnaJ domain or J- 99.6 9.6E-16 2.1E-20 110.6 6.1 55 90-144 1-55 (55)
51 KOG0550|consensus 99.5 9.2E-15 2E-19 142.0 4.9 87 85-172 369-456 (486)
52 KOG0722|consensus 99.5 1.5E-14 3.3E-19 131.7 6.0 68 87-155 31-98 (329)
53 PRK09430 djlA Dna-J like membr 99.5 4.4E-14 9.6E-19 134.6 9.3 121 18-145 136-263 (267)
54 COG5407 SEC63 Preprotein trans 99.5 3.8E-14 8.2E-19 138.2 7.2 130 9-160 40-174 (610)
55 PRK05014 hscB co-chaperone Hsc 99.4 9.7E-14 2.1E-18 123.6 6.2 65 89-153 1-72 (171)
56 PRK01356 hscB co-chaperone Hsc 99.4 1.4E-13 3E-18 121.9 6.2 65 89-153 2-71 (166)
57 PRK00294 hscB co-chaperone Hsc 99.4 3E-13 6.5E-18 120.3 6.7 67 87-153 2-75 (173)
58 PRK03578 hscB co-chaperone Hsc 99.4 4.3E-13 9.4E-18 119.8 6.7 66 88-153 5-77 (176)
59 KOG0720|consensus 99.4 3.7E-13 7.9E-18 132.3 5.4 67 87-154 233-299 (490)
60 PTZ00100 DnaJ chaperone protei 99.4 5.3E-13 1.2E-17 109.8 5.2 55 85-143 61-115 (116)
61 PHA02624 large T antigen; Prov 99.2 6.5E-12 1.4E-16 129.4 5.2 60 88-151 10-71 (647)
62 KOG1150|consensus 99.0 4.7E-10 1E-14 99.1 5.3 66 88-153 52-118 (250)
63 PRK01773 hscB co-chaperone Hsc 99.0 1E-09 2.2E-14 97.8 6.6 65 89-153 2-73 (173)
64 PRK14299 chaperone protein Dna 99.0 2.1E-09 4.5E-14 104.1 9.2 70 315-392 125-194 (291)
65 TIGR00714 hscB Fe-S protein as 98.9 1.4E-09 3E-14 95.7 5.6 54 101-154 3-61 (157)
66 PRK14282 chaperone protein Dna 98.8 6.5E-09 1.4E-13 104.0 7.6 87 192-325 272-359 (369)
67 PRK10266 curved DNA-binding pr 98.8 2.8E-08 6E-13 97.0 9.6 75 317-393 115-202 (306)
68 PRK14290 chaperone protein Dna 98.7 3.9E-08 8.4E-13 98.3 7.4 87 192-326 266-353 (365)
69 PF01556 CTDII: DnaJ C termina 98.7 4.5E-08 9.7E-13 76.4 6.1 72 197-315 1-74 (81)
70 PRK14285 chaperone protein Dna 98.6 5.1E-08 1.1E-12 97.3 7.4 85 192-323 262-347 (365)
71 COG5269 ZUO1 Ribosome-associat 98.6 2.3E-08 4.9E-13 92.4 3.4 71 84-154 38-113 (379)
72 PRK14294 chaperone protein Dna 98.6 7.7E-08 1.7E-12 96.2 7.2 86 192-325 260-346 (366)
73 PRK14289 chaperone protein Dna 98.6 2E-07 4.4E-12 93.8 9.7 79 318-398 126-276 (386)
74 PRK14284 chaperone protein Dna 98.6 1.2E-07 2.6E-12 95.6 7.5 87 192-324 274-361 (391)
75 PRK10767 chaperone protein Dna 98.5 1.5E-07 3.3E-12 94.3 7.2 87 192-326 258-345 (371)
76 PRK14298 chaperone protein Dna 98.5 1.6E-07 3.6E-12 94.1 7.1 86 193-326 262-348 (377)
77 PRK14300 chaperone protein Dna 98.5 3.6E-07 7.8E-12 91.6 9.2 80 192-318 261-341 (372)
78 PRK14301 chaperone protein Dna 98.5 5.3E-07 1.1E-11 90.4 10.2 76 317-393 115-258 (373)
79 PRK14293 chaperone protein Dna 98.5 8.1E-07 1.8E-11 89.1 10.9 81 318-400 115-267 (374)
80 TIGR02349 DnaJ_bact chaperone 98.5 3.5E-07 7.5E-12 91.2 7.4 83 192-322 263-346 (354)
81 PRK14295 chaperone protein Dna 98.5 5.1E-07 1.1E-11 90.9 8.6 76 192-314 282-357 (389)
82 PRK14287 chaperone protein Dna 98.4 5.8E-07 1.3E-11 90.0 8.7 84 192-323 258-342 (371)
83 PRK14279 chaperone protein Dna 98.4 8E-07 1.7E-11 89.6 9.2 76 192-315 289-364 (392)
84 PRK14291 chaperone protein Dna 98.4 6.5E-07 1.4E-11 90.0 8.6 75 192-313 271-346 (382)
85 PRK14286 chaperone protein Dna 98.4 9.6E-07 2.1E-11 88.5 9.4 75 317-393 121-263 (372)
86 PRK14288 chaperone protein Dna 98.4 8.5E-07 1.8E-11 88.8 8.8 81 192-319 254-335 (369)
87 PRK14283 chaperone protein Dna 98.4 1.8E-06 3.8E-11 86.8 9.8 76 317-393 117-264 (378)
88 PRK14297 chaperone protein Dna 98.3 1.8E-06 3.9E-11 86.8 9.5 76 317-393 119-266 (380)
89 PRK14280 chaperone protein Dna 98.3 1.6E-06 3.6E-11 86.9 9.1 75 317-393 114-260 (376)
90 PRK14277 chaperone protein Dna 98.3 1.8E-06 3.9E-11 86.9 9.3 74 317-392 126-271 (386)
91 PRK14276 chaperone protein Dna 98.3 2.2E-06 4.8E-11 86.2 9.7 73 317-390 117-261 (380)
92 KOG1789|consensus 98.3 5.5E-07 1.2E-11 96.2 5.3 58 84-144 1276-1337(2235)
93 PRK14296 chaperone protein Dna 98.3 2E-06 4.2E-11 86.2 8.9 75 317-393 120-266 (372)
94 PRK14292 chaperone protein Dna 98.3 2.7E-06 5.9E-11 85.3 9.8 76 318-397 111-259 (371)
95 PRK14281 chaperone protein Dna 98.3 2.7E-06 5.9E-11 85.9 9.4 75 317-393 134-279 (397)
96 PRK14278 chaperone protein Dna 98.3 2.4E-06 5.2E-11 85.8 8.7 77 192-315 259-336 (378)
97 KOG0723|consensus 98.2 2.8E-06 6E-11 68.0 6.5 57 85-145 52-108 (112)
98 KOG0568|consensus 98.2 9.3E-07 2E-11 80.1 3.8 57 88-145 46-103 (342)
99 COG0484 DnaJ DnaJ-class molecu 98.2 3.7E-06 8.1E-11 82.8 6.9 78 193-318 261-339 (371)
100 PTZ00037 DnaJ_C chaperone prot 98.1 9.1E-06 2E-10 82.5 8.2 74 192-312 270-347 (421)
101 TIGR03835 termin_org_DnaJ term 97.9 5.6E-05 1.2E-09 79.9 9.3 71 89-160 2-72 (871)
102 COG1076 DjlA DnaJ-domain-conta 97.4 0.00021 4.6E-09 64.0 5.4 54 89-142 113-173 (174)
103 KOG3192|consensus 97.1 0.00066 1.4E-08 58.3 4.1 68 86-153 5-79 (168)
104 TIGR02642 phage_xxxx uncharact 96.6 0.0021 4.5E-08 57.8 3.8 34 255-289 116-149 (186)
105 KOG0431|consensus 95.7 0.013 2.8E-07 60.1 4.7 45 96-140 395-446 (453)
106 KOG0712|consensus 95.5 0.027 5.9E-07 55.1 6.2 74 193-313 249-324 (337)
107 COG1076 DjlA DnaJ-domain-conta 95.3 0.013 2.9E-07 52.4 2.9 61 93-153 5-72 (174)
108 PF03656 Pam16: Pam16; InterP 94.4 0.078 1.7E-06 44.8 5.1 59 85-147 54-112 (127)
109 PF13446 RPT: A repeated domai 85.8 1 2.2E-05 32.8 3.4 28 88-115 4-31 (62)
110 PF00684 DnaJ_CXXCXGXG: DnaJ c 85.2 0.99 2.2E-05 33.5 3.1 36 231-267 19-54 (66)
111 PF11833 DUF3353: Protein of u 83.6 2.2 4.8E-05 38.8 5.3 41 98-146 1-41 (194)
112 KOG0724|consensus 80.8 1.3 2.8E-05 43.7 2.9 55 100-154 3-61 (335)
113 PF14687 DUF4460: Domain of un 71.1 7.7 0.00017 32.0 4.5 47 99-145 4-54 (112)
114 PF12725 DUF3810: Protein of u 54.8 75 0.0016 31.2 8.9 59 89-147 82-151 (318)
115 PLN03165 chaperone protein dna 53.5 21 0.00045 29.5 4.0 13 253-265 74-86 (111)
116 KOG0715|consensus 48.7 39 0.00085 32.7 5.7 34 348-390 234-267 (288)
117 COG5552 Uncharacterized conser 48.1 66 0.0014 24.4 5.5 35 89-123 3-37 (88)
118 PF12791 RsgI_N: Anti-sigma fa 46.3 52 0.0011 23.1 4.7 37 335-371 4-40 (56)
119 PF04246 RseC_MucC: Positive r 44.6 28 0.0006 29.4 3.6 24 268-291 40-63 (135)
120 PF12991 DUF3875: Domain of un 40.8 22 0.00048 25.2 1.9 23 378-400 26-49 (54)
121 PF10041 DUF2277: Uncharacteri 39.6 1.4E+02 0.0031 22.8 6.2 52 93-144 7-61 (78)
122 PF12434 Malate_DH: Malate deh 38.3 40 0.00086 20.4 2.4 17 103-119 10-26 (28)
123 PF07709 SRR: Seven Residue Re 38.3 17 0.00036 18.3 0.7 13 131-143 2-14 (14)
124 KOG3442|consensus 34.7 60 0.0013 27.2 3.8 56 86-145 56-111 (132)
125 COG2214 CbpA DnaJ-class molecu 33.4 1.2E+02 0.0026 26.8 6.2 69 321-392 150-218 (237)
126 PF04719 TAFII28: hTAFII28-lik 31.7 82 0.0018 24.9 4.1 14 100-113 77-90 (90)
127 PRK10862 SoxR reducing system 28.8 1.3E+02 0.0027 26.3 5.2 22 269-290 48-69 (154)
128 COG2879 Uncharacterized small 28.4 79 0.0017 23.2 3.1 28 109-138 27-54 (65)
129 PF06675 DUF1177: Protein of u 26.8 1.9E+02 0.004 27.5 6.1 70 299-368 79-159 (276)
130 PF07092 DUF1356: Protein of u 26.2 31 0.00068 32.3 1.0 32 255-289 39-72 (238)
131 PF08774 VRR_NUC: VRR-NUC doma 24.7 55 0.0012 25.9 2.0 20 382-401 62-81 (100)
132 KOG4684|consensus 24.0 69 0.0015 29.5 2.7 88 20-122 186-273 (275)
133 cd00084 HMG-box High Mobility 23.0 1.6E+02 0.0034 20.6 4.1 42 107-153 12-53 (66)
134 CHL00185 ycf59 magnesium-proto 21.7 2.1E+02 0.0045 28.3 5.6 61 86-146 247-308 (351)
135 PF07739 TipAS: TipAS antibiot 21.5 1.4E+02 0.003 24.0 3.9 52 96-156 51-104 (118)
136 smart00276 GLECT Galectin. Gal 21.0 1.4E+02 0.003 24.8 3.9 43 351-393 3-50 (128)
137 cd08394 C2A_Munc13 C2 domain f 20.6 1.5E+02 0.0033 25.0 4.0 51 305-362 60-110 (127)
138 TIGR02029 AcsF magnesium-proto 20.1 3E+02 0.0064 27.1 6.2 59 86-144 241-300 (337)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9e-80 Score=595.39 Aligned_cols=308 Identities=39% Similarity=0.682 Sum_probs=264.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCccc
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMME 166 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 166 (401)
..+|||+||||+++||.+|||||||+||++||||+|+.+++|+++|++|++|||||+||+||++||+||+++++++++++
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg 81 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGG 81 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCC
Confidence 56899999999999999999999999999999999997799999999999999999999999999999999987433221
Q ss_pred -cCC----CCCCccCCCCcCCCCCC---ccccccccCcceeecccccHHHHhcCceEEEEeccccccCC-CC--------
Q psy1364 167 -GMD----PFSSFFGDFGFHFGGEN---EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPA-LG-------- 229 (401)
Q Consensus 167 -~~~----~f~~~f~~~~~~fg~~~---~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~-~~-------- 229 (401)
++. .|.++|++| ||++. +++.++++|.|+.+.++|||+|||.|+++++.+.+.+.|.. .|
T Consensus 82 ~g~~~fgg~~~DIF~~~---FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~ 158 (371)
T COG0484 82 FGFGGFGGDFGDIFEDF---FGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTD 158 (371)
T ss_pred CCcCCCCCCHHHHHHHh---hcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCC
Confidence 111 244455443 43221 23445789999999999999999999999999999988862 22
Q ss_pred ---CcccccccceEEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCC
Q psy1364 230 ---TRKCNCRQEMQTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEP 294 (401)
Q Consensus 230 ---~~~C~c~~~~~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~ 294 (401)
|.+|++.|++...+.- |.+++.+ ..+|++|+|.|++.+.++++|+||||+.+|++|++.|+|++
T Consensus 159 ~~tC~tC~G~G~v~~~~~~-g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~ 237 (371)
T COG0484 159 PKTCPTCNGSGQVRTVQRT-GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEA 237 (371)
T ss_pred CCcCCCCCCcCeEEEEEee-eEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCccc
Confidence 2355666665444422 5555543 24899999999999999999999999999999999999999
Q ss_pred CCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCC
Q psy1364 295 HID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSY 373 (401)
Q Consensus 295 ~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~ 373 (401)
+++ +++|||||+|.|++|+.|.|+|+||+++++|++.+|++|+++.|+||||+ ++|+||+++++|+++||+|+|||..
T Consensus 238 g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~p~~ 316 (371)
T COG0484 238 GPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKL 316 (371)
T ss_pred CCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCcccc
Confidence 986 57899999999999999999999999999999999999999999999998 9999999999999999999999986
Q ss_pred CCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 374 ENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 374 ~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
.+ ..+|||||+++|++|++ ||++||+
T Consensus 317 ~~-~~~GDl~v~v~v~~P~~-ls~~q~~ 342 (371)
T COG0484 317 RS-GGRGDLYVRVKVETPKN-LSDEQKE 342 (371)
T ss_pred CC-CCcCCEEEEEEEEcCCC-CCHHHHH
Confidence 44 45799999999999997 9999985
No 2
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.2e-72 Score=555.05 Aligned_cols=308 Identities=31% Similarity=0.509 Sum_probs=253.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc-Ccc-
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE-GMM- 165 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-~~~- 165 (401)
..|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||+||+.||+||++++..+ +.+
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~ 81 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSS 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCc
Confidence 5799999999999999999999999999999999985 7899999999999999999999999999999877532 100
Q ss_pred --cc------------CCCCCCccCCCCcCCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccccccCC-CC-
Q psy1364 166 --EG------------MDPFSSFFGDFGFHFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPA-LG- 229 (401)
Q Consensus 166 --~~------------~~~f~~~f~~~~~~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~-~~- 229 (401)
++ ++.|+++|++ .||++..+...+++|.|+.+++.|||+|+|+|+++++.+.+.+.|+. .|
T Consensus 82 ~~~~~~~~~~~~~~~g~~~f~d~f~~---~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~ 158 (372)
T PRK14296 82 NFGDFEDLFSNMGSSGFSSFTNIFSD---FFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGS 158 (372)
T ss_pred CCCccccccccccccccccchhhhhh---hcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCC
Confidence 11 1112223332 25432111233467999999999999999999999999999888762 22
Q ss_pred ----------CcccccccceE-EEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEE
Q psy1364 230 ----------TRKCNCRQEMQ-TRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQT 286 (401)
Q Consensus 230 ----------~~~C~c~~~~~-~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i 286 (401)
|..|++.|.+. .+++|++.+++.+ ...|+.|+|.|++.+.++++|.||||+++|++|
T Consensus 159 G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i 238 (372)
T PRK14296 159 GAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQI 238 (372)
T ss_pred ccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEE
Confidence 22344555433 3345664443221 246888888899999999999999999999999
Q ss_pred eeCCCCCCCC-CCCCccEEEEEEEeCCCCcccc-CCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEE
Q psy1364 287 KFTAEGEPHI-DGEPGDLIFHIRTLPHPRFERR-GDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIR 364 (401)
Q Consensus 287 ~~~g~G~~~~-~g~~GDL~v~i~v~~h~~f~r~-g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~ 364 (401)
+|+|+|++.+ ++.+|||+|+|+++||+.|+|+ |+||+++++|||+|||+|+++.|+||||+ ++|+||++++||++++
T Consensus 239 ~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~r 317 (372)
T PRK14296 239 KLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELII 317 (372)
T ss_pred EEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEE
Confidence 9999999985 5789999999999999999995 89999999999999999999999999997 9999999999999999
Q ss_pred EcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 365 KKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 365 l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
|+|+|||...+++.+|||||+|+|.||++ ||++||+
T Consensus 318 i~GkGmP~~~~~~~~GDL~V~~~V~~P~~-Ls~~q~~ 353 (372)
T PRK14296 318 INNKGLYKSINKDKRGDLIIKVNIVVPKN-LSKKEKE 353 (372)
T ss_pred EcCCCCCcCCCCCCcCCEEEEEEEECCCC-CCHHHHH
Confidence 99999996544556899999999999997 9999984
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-71 Score=552.76 Aligned_cols=307 Identities=26% Similarity=0.471 Sum_probs=252.9
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCcccc
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMMEG 167 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 167 (401)
..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||++|+.||+||++++...+.+
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~-- 79 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGAS-- 79 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCC--
Confidence 479999999999999999999999999999999998778899999999999999999999999999999877532211
Q ss_pred CCCCCCccCCC----CcCCCCCC--ccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC----------C
Q psy1364 168 MDPFSSFFGDF----GFHFGGEN--EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG----------T 230 (401)
Q Consensus 168 ~~~f~~~f~~~----~~~fg~~~--~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~----------~ 230 (401)
.+.|+++|++| +.+||++. ....++++|.|+.+++.|||+|+|+|+++++.+.+.+.|+ |.| |
T Consensus 80 ~~~~~~~f~~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C 159 (369)
T PRK14288 80 QSDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETC 159 (369)
T ss_pred ccccccchhhHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCC
Confidence 11233333221 11244211 1112345789999999999999999999999999888775 222 1
Q ss_pred cccccccceEEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCCC
Q psy1364 231 RKCNCRQEMQTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHIDG 298 (401)
Q Consensus 231 ~~C~c~~~~~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~g 298 (401)
..|++.|.+...+ |++++.+ ...|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++.+++
T Consensus 160 ~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~ 236 (369)
T PRK14288 160 KQCNGQGQVFMRQ---GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKG 236 (369)
T ss_pred CCCCCCcEEEEEe---ceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCC
Confidence 2344444433322 3343322 245778888888999999999999999999999999999998888
Q ss_pred CCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCC
Q psy1364 299 EPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENNNA 378 (401)
Q Consensus 299 ~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~ 378 (401)
.+|||+|+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+.++|++|++++||++++|+|+|||..+ ...
T Consensus 237 ~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~-~~~ 315 (369)
T PRK14288 237 KRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPE-SSY 315 (369)
T ss_pred CCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCC-CCC
Confidence 9999999999999999999999999999999999999999999999998899999999999999999999999764 335
Q ss_pred CccEEEEEEEECCCCCCChhhhC
Q psy1364 379 KGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 379 ~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+|||||+|+|.+|++ ||++|++
T Consensus 316 ~GDL~v~~~v~~P~~-ls~~q~~ 337 (369)
T PRK14288 316 RGSLIVELQVIYPKS-LNKEQQE 337 (369)
T ss_pred CCCEEEEEEEECCCC-CCHHHHH
Confidence 799999999999997 9999974
No 4
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=3.6e-70 Score=547.49 Aligned_cols=304 Identities=38% Similarity=0.648 Sum_probs=253.1
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM 164 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~ 164 (401)
.+...|||+||||+++||.+|||+|||+||++||||+|++ .++|++|++||++|+||++|+.||+||++++..++.
T Consensus 24 ~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~~ 99 (421)
T PTZ00037 24 EVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ 99 (421)
T ss_pred cccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCCC
Confidence 4446899999999999999999999999999999999863 479999999999999999999999999987753211
Q ss_pred cccCCCCCCccCCCCcCCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC----------Cccc
Q psy1364 165 MEGMDPFSSFFGDFGFHFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG----------TRKC 233 (401)
Q Consensus 165 ~~~~~~f~~~f~~~~~~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~----------~~~C 233 (401)
+.+ |.++|..| ||++. +....++|.|+.+.|.|||+|+|+|+++++.+.+.+.|+ |.| |..|
T Consensus 100 --~~d-~~d~f~~~---Fggg~-~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C 172 (421)
T PTZ00037 100 --PAD-ASDLFDLI---FGGGR-KPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLC 172 (421)
T ss_pred --Ccc-hhhhHHHh---hcccc-ccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCC
Confidence 111 33333322 33221 112346799999999999999999999999999998876 222 1234
Q ss_pred ccccc-eEEEEecCceeEEEE---------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCC
Q psy1364 234 NCRQE-MQTRQLGPGRFQMMQ---------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHID 297 (401)
Q Consensus 234 ~c~~~-~~~~~~g~g~~~~~~---------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~ 297 (401)
++.|. +..+++|+ ++++.+ ...|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++.++
T Consensus 173 ~G~G~~~~~~~~g~-~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~ 251 (421)
T PTZ00037 173 NGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPN 251 (421)
T ss_pred CCCCeEEEEEeecc-eeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCC
Confidence 44443 33444555 322221 14688889999999999999999999999999999999999988
Q ss_pred CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCCCCCCC
Q psy1364 298 GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKI--TWPGARIRKKNEGMPSYEN 375 (401)
Q Consensus 298 g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~--~~~g~~~~l~g~G~p~~~~ 375 (401)
+.||||||+|+++||+.|+|+|+||+++++|||+|||+|+++.|+||||+.+.|+||++ ++||++++|+|+|||..++
T Consensus 252 ~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~ 331 (421)
T PTZ00037 252 EIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKS 331 (421)
T ss_pred CCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCC
Confidence 99999999999999999999999999999999999999999999999998899999977 9999999999999998665
Q ss_pred CCCCccEEEEEEEECC--CCCCChhhhC
Q psy1364 376 NNAKGVLYITFDVEFP--KNELSEEEKE 401 (401)
Q Consensus 376 ~~~~GdL~i~~~v~~P--~~~ls~~qk~ 401 (401)
++.+|||||+|+|.|| ++ ||++|++
T Consensus 332 ~~~rGDL~V~~~V~~P~~~~-Ls~~qk~ 358 (421)
T PTZ00037 332 PFKKGNLYVTFEVIFPVDRK-FTNEEKE 358 (421)
T ss_pred CCCCCCEEEEEEEEcCCCCC-CCHHHHH
Confidence 5578999999999999 75 9999974
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-69 Score=535.84 Aligned_cols=306 Identities=33% Similarity=0.578 Sum_probs=251.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc--Ccc
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE--GMM 165 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~--~~~ 165 (401)
..|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||++|+.||+||+++++.+ +.+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence 479999999999999999999999999999999998778899999999999999999999999999999877532 111
Q ss_pred -ccC-------CCCCCccCCCCcCCCCCC------ccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCCC
Q psy1364 166 -EGM-------DPFSSFFGDFGFHFGGEN------EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALGT 230 (401)
Q Consensus 166 -~~~-------~~f~~~f~~~~~~fg~~~------~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~~ 230 (401)
+++ +.|+++|+.| ||++. .+.....+|.|+.++|.|||||+|+|+++++.+.+.+.|+ |.|+
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~f---fgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~ 159 (372)
T PRK14286 83 QGAYTDFSDIFGDFGDIFGDF---FGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGS 159 (372)
T ss_pred CCCcccccccccchhhHHHHh---hCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCC
Confidence 011 1122233322 33210 0112346799999999999999999999999999998886 2221
Q ss_pred --------ccc-ccc--cceEEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEe
Q psy1364 231 --------RKC-NCR--QEMQTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTK 287 (401)
Q Consensus 231 --------~~C-~c~--~~~~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~ 287 (401)
..| .|. |.+... . |++++.+ ...|+.|+|.|++++.++++|.||||+++|++|+
T Consensus 160 G~~~~~~~~~C~~C~G~G~v~~~-~--G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~ 236 (372)
T PRK14286 160 GASKGSSPTTCPDCGGSGQIRRT-Q--GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLK 236 (372)
T ss_pred CcCCCCCCccCCCCcCeEEEEEE-e--ceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEE
Confidence 233 244 333222 2 4443221 2468888888999999999999999999999999
Q ss_pred eCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEc
Q psy1364 288 FTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKK 366 (401)
Q Consensus 288 ~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~ 366 (401)
|+|+|++.++ +.+|||||+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||+++.|+||+++++|++++|+
T Consensus 237 ~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~ 316 (372)
T PRK14286 237 VSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLK 316 (372)
T ss_pred ECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEEC
Confidence 9999999886 567999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 367 NEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 367 g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
|+|||...+ +.+|||||+|+|.||++ ||++||+
T Consensus 317 G~G~P~~~~-~~~GDL~V~~~V~~P~~-Ls~~qk~ 349 (372)
T PRK14286 317 GHGMPYLGA-YGKGDQHVIVKIEIPKK-ITRRQRE 349 (372)
T ss_pred CCCCCCCCC-CCCCcEEEEEEEECCCC-CCHHHHH
Confidence 999997643 46899999999999997 9999984
No 6
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.5e-68 Score=530.05 Aligned_cols=307 Identities=31% Similarity=0.527 Sum_probs=252.1
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc---
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM--- 164 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--- 164 (401)
..|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||+++++.+..
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAED 82 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-hhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCccc
Confidence 4699999999999999999999999999999999975 778999999999999999999999999999987753210
Q ss_pred ---cccCCCCCCccCCCCcCCCCCCc-cccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC----------
Q psy1364 165 ---MEGMDPFSSFFGDFGFHFGGENE-REREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG---------- 229 (401)
Q Consensus 165 ---~~~~~~f~~~f~~~~~~fg~~~~-~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~---------- 229 (401)
+++++.|+++|+.| ||++.+ +...+++|.|+.+++.|||+|+|+|+++++.+.+.+.|+ |.|
T Consensus 83 ~~~~~~~~~~~d~f~~~---Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~ 159 (377)
T PRK14298 83 IFRGADFGGFGDIFEMF---FGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPK 159 (377)
T ss_pred ccccCCcCcchhhhHhh---hcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCC
Confidence 01112233444432 443211 122346899999999999999999999999999998875 222
Q ss_pred -CcccccccceEEEEecC-ceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCC
Q psy1364 230 -TRKCNCRQEMQTRQLGP-GRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPH 295 (401)
Q Consensus 230 -~~~C~c~~~~~~~~~g~-g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~ 295 (401)
|..|++.|.+...+..+ |.+++.+ ...|+.|+|.|++.+.++++|.||||+++|++|+|+|+|+++
T Consensus 160 ~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~ 239 (377)
T PRK14298 160 RCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAG 239 (377)
T ss_pred cCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCC
Confidence 22344555544333333 3333221 246778888888999999999999999999999999999997
Q ss_pred C-CCCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCC
Q psy1364 296 I-DGEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYE 374 (401)
Q Consensus 296 ~-~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~ 374 (401)
+ ++.+|||||+|+++||+.|+|+|+||+++++|||.||++|+++.|+|+||+ +.|+||+++++|++++|+|+|||..+
T Consensus 240 ~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G~p~~~ 318 (377)
T PRK14298 240 SPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKGMPRLH 318 (377)
T ss_pred CCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCCCCCCC
Confidence 5 468999999999999999999999999999999999999999999999997 89999999999999999999999764
Q ss_pred CCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 375 NNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 375 ~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+ +.+|||||+|+|.+|+. ||++|++
T Consensus 319 ~-~~~GDL~V~~~V~~P~~-ls~~~~~ 343 (377)
T PRK14298 319 G-HGKGDQLVKVIVKTPTK-LTQEQKE 343 (377)
T ss_pred C-CCCCCEEEEEEEECCCC-CCHHHHH
Confidence 3 45899999999999997 9999874
No 7
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-68 Score=532.63 Aligned_cols=308 Identities=36% Similarity=0.619 Sum_probs=255.6
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc---
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM--- 164 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--- 164 (401)
..|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||+++++.++.
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 47999999999999999999999999999999999877889999999999999999999999999999987753210
Q ss_pred --c-cc-----C--------CCCCCccCCCCcCCCCCCc-cccccccCcceeecccccHHHHhcCceEEEEeccccccC-
Q psy1364 165 --M-EG-----M--------DPFSSFFGDFGFHFGGENE-REREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP- 226 (401)
Q Consensus 165 --~-~~-----~--------~~f~~~f~~~~~~fg~~~~-~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~- 226 (401)
+ ++ + |.|++||++ .||++.. +...+.+|.|+.+.|.|||+|+|+|+++++.+.+.+.|+
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~d~f~~~F~~---~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~ 160 (386)
T PRK14277 84 GFGQGGFGGGGFDFDFGGFGDIFEDIFGD---FFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDV 160 (386)
T ss_pred CcCCCCccccCccccccchhHHHHHhhcc---cccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCC
Confidence 0 00 0 123333332 2443211 112345799999999999999999999999999998886
Q ss_pred CCC-----------Ccccccccce-EEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccC
Q psy1364 227 ALG-----------TRKCNCRQEM-QTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKD 282 (401)
Q Consensus 227 ~~~-----------~~~C~c~~~~-~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~ 282 (401)
|.| |..|++.|.+ ..+++++|++++.+ ...|+.|+|.|++.+.++++|.||||+++
T Consensus 161 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~ 240 (386)
T PRK14277 161 CKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDD 240 (386)
T ss_pred CCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCccC
Confidence 222 1234444433 34457778776543 23577888888899999999999999999
Q ss_pred CCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCc
Q psy1364 283 GQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGA 361 (401)
Q Consensus 283 G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~ 361 (401)
|++|+|+|+|++.+. +.+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+||||+ +.|.||+++++|+
T Consensus 241 G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~ 319 (386)
T PRK14277 241 GQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGT 319 (386)
T ss_pred CcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEEECCCCCCCC
Confidence 999999999998764 57899999999999999999999999999999999999999999999997 8999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 362 RIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 362 ~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+++|+|+|||..++ +.+|||||+|+|.||++ ||++||+
T Consensus 320 ~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~~-Ls~~qk~ 357 (386)
T PRK14277 320 KFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKK-LTEKQKE 357 (386)
T ss_pred EEEECCCCCCCCCC-CCCCCEEEEEEEEeCCC-CCHHHHH
Confidence 99999999997643 36899999999999997 9999974
No 8
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-67 Score=524.93 Aligned_cols=307 Identities=30% Similarity=0.530 Sum_probs=252.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccC-c-c
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEG-M-M 165 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~-~ 165 (401)
..|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||++|+||++|+.||+||++++..+. . +
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGG 81 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCC
Confidence 4699999999999999999999999999999999985 78899999999999999999999999999998775321 1 1
Q ss_pred -ccCCCCCCccCCCCcCCCCC-C-ccccccccCcceeecccccHHHHhcCceEEEEeccccccCC-CC-----------C
Q psy1364 166 -EGMDPFSSFFGDFGFHFGGE-N-EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPA-LG-----------T 230 (401)
Q Consensus 166 -~~~~~f~~~f~~~~~~fg~~-~-~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~-~~-----------~ 230 (401)
+++..|+++|..| ||++ . +....+.+|.|+.+++.|||+|+|+|+++++.+.+.+.|+. .| |
T Consensus 82 ~~~f~~~~d~f~~~---fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C 158 (371)
T PRK14287 82 AGDFGGFSDIFDMF---FGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETC 158 (371)
T ss_pred CccccchHHHHHhh---hccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCccc
Confidence 1111233334332 3321 1 11123457999999999999999999999999999988862 22 1
Q ss_pred cccccccce-EEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCC
Q psy1364 231 RKCNCRQEM-QTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHID 297 (401)
Q Consensus 231 ~~C~c~~~~-~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~ 297 (401)
..|+|.|.+ ..+++++|++++.+ ...|..|.|.+++.+.++++|.||||+++|++|+|+|+|++.++
T Consensus 159 ~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~ 238 (371)
T PRK14287 159 SHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVN 238 (371)
T ss_pred CCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCC
Confidence 234444543 34456778776532 12466667777788889999999999999999999999999865
Q ss_pred -CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCC
Q psy1364 298 -GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENN 376 (401)
Q Consensus 298 -g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~ 376 (401)
+.+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+|+||+ +.|+||+++++|++++|+|+|||...+
T Consensus 239 ~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~~- 316 (371)
T PRK14287 239 GGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKGVPNVHG- 316 (371)
T ss_pred CCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCCccCCCC-
Confidence 57899999999999999999999999999999999999999999999997 899999999999999999999997643
Q ss_pred CCCccEEEEEEEECCCCCCChhhhC
Q psy1364 377 NAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 377 ~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+.+|||||+|+|.+|+. |+++||+
T Consensus 317 ~~~GDL~V~~~v~~P~~-l~~~q~~ 340 (371)
T PRK14287 317 RGQGDQHVQVRVVTPKN-LTEKEKE 340 (371)
T ss_pred CCCCCEEEEEEEEcCCC-CCHHHHH
Confidence 35799999999999997 9999974
No 9
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.4e-68 Score=524.62 Aligned_cols=307 Identities=32% Similarity=0.569 Sum_probs=254.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc----
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM---- 164 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~---- 164 (401)
.|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++..++.
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~~ 82 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCcccc
Confidence 6999999999999999999999999999999999887889999999999999999999999999999987753211
Q ss_pred cccCCC-------CCCccCCCCcCCCCC--CccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCCC----
Q psy1364 165 MEGMDP-------FSSFFGDFGFHFGGE--NEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALGT---- 230 (401)
Q Consensus 165 ~~~~~~-------f~~~f~~~~~~fg~~--~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~~---- 230 (401)
.+++++ |+++|+. +||++ ..+.....+|.|+.+++.|||||+|+|+++++.+++.+.|+ |.|+
T Consensus 83 ~~g~~~~~~~~~~~~d~f~~---~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~ 159 (365)
T PRK14285 83 SGGFSGFSDIFEDFGDIFDS---FFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEK 159 (365)
T ss_pred CCCccccccccccHHHHHHH---hhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCC
Confidence 012222 2223332 24432 11112345799999999999999999999999999998876 2221
Q ss_pred ----ccc-ccccceEEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCC
Q psy1364 231 ----RKC-NCRQEMQTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGE 293 (401)
Q Consensus 231 ----~~C-~c~~~~~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~ 293 (401)
..| .|.|...... ++|++++.+ ...|..|+|.|++.+.++++|.||||+++|++|+|+|+|+
T Consensus 160 ~~~~~~C~~C~G~G~~~~-~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~ 238 (365)
T PRK14285 160 GTSPSICNMCNGSGRVMQ-GGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGS 238 (365)
T ss_pred CCCCccCCCccCceeEEe-cCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccc
Confidence 133 2444332222 456654322 2468888889999999999999999999999999999999
Q ss_pred CCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCC
Q psy1364 294 PHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPS 372 (401)
Q Consensus 294 ~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~ 372 (401)
+.++ +.+|||||+|++++|+.|+|+|+||+++++|||.||++|+++.|+|+||+.++|.||+++++|++++|+|+|||.
T Consensus 239 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~ 318 (365)
T PRK14285 239 VNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPI 318 (365)
T ss_pred cCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccC
Confidence 9887 568999999999999999999999999999999999999999999999988999999999999999999999997
Q ss_pred CCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 373 YENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 373 ~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
.+. ..+|||||+|+|.+|+. |+++|++
T Consensus 319 ~~~-~~~GDL~V~~~v~~P~~-l~~~q~~ 345 (365)
T PRK14285 319 LHT-EKFGNLILIIKIKTPKN-LNSNAIK 345 (365)
T ss_pred CCC-CCCCCEEEEEEEECCCC-CCHHHHH
Confidence 643 35799999999999997 9999974
No 10
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-67 Score=525.99 Aligned_cols=307 Identities=32% Similarity=0.564 Sum_probs=253.1
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc--c
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM--M 165 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--~ 165 (401)
..|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||++++..+.. +
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 81 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG 81 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCC
Confidence 4699999999999999999999999999999999985 778999999999999999999999999999987753211 0
Q ss_pred -c--cCC---CCCCccCCCCcCCCCCCc--cccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC-------
Q psy1364 166 -E--GMD---PFSSFFGDFGFHFGGENE--REREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG------- 229 (401)
Q Consensus 166 -~--~~~---~f~~~f~~~~~~fg~~~~--~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~------- 229 (401)
+ ++. .|.++|+.| ||++.+ .....++|.|+.+++.|||||+|+|+++++.+.+.+.|+ |.|
T Consensus 82 ~~~~~~~~~~~~~d~f~~~---fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~ 158 (376)
T PRK14280 82 FGGGDFGGGFGFEDIFSSF---FGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGT 158 (376)
T ss_pred CCCCCccccccchhhHHHH---hCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCC
Confidence 0 000 123333332 442211 112345799999999999999999999999999998886 222
Q ss_pred ----CcccccccceE-EEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCC
Q psy1364 230 ----TRKCNCRQEMQ-TRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEG 292 (401)
Q Consensus 230 ----~~~C~c~~~~~-~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G 292 (401)
|..|+|.|.+. ..++++|++++.+ ...|+.|+|.|++.+.++++|.||||+++|++|+|+|+|
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G 238 (376)
T PRK14280 159 SKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEG 238 (376)
T ss_pred CCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccc
Confidence 12344444433 3345667665432 245777888888999999999999999999999999999
Q ss_pred CCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCC
Q psy1364 293 EPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMP 371 (401)
Q Consensus 293 ~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p 371 (401)
++.++ +.+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+|+||+ +.|.||+++++|++++|+|+|||
T Consensus 239 ~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~i~g~G~p 317 (376)
T PRK14280 239 EPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFRLKGKGVP 317 (376)
T ss_pred cCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEEEcCCCCC
Confidence 99875 57899999999999999999999999999999999999999999999996 89999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 372 SYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 372 ~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
...+ +.+|||||+|+|.+|++ ||++||+
T Consensus 318 ~~~~-~~~GDL~v~~~v~~P~~-Ls~~q~~ 345 (376)
T PRK14280 318 NVRG-YGQGDQYVVVRVVTPTK-LTDRQKE 345 (376)
T ss_pred CCCC-CCCCCEEEEEEEECCCC-CCHHHHH
Confidence 7643 36899999999999997 9999974
No 11
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-67 Score=526.68 Aligned_cols=308 Identities=33% Similarity=0.552 Sum_probs=247.9
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc-C--cc
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE-G--MM 165 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-~--~~ 165 (401)
.|||+||||+++||.+|||+|||+||++||||+|++++.|+++|++|++||++|+||++|+.||+||++++..+ + .+
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~ 80 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence 48999999999999999999999999999999999878899999999999999999999999999999876321 1 00
Q ss_pred ccCC-------CCCCccC-------C-CCcCCCCC------CccccccccCcceeecccccHHHHhcCceEEEEeccccc
Q psy1364 166 EGMD-------PFSSFFG-------D-FGFHFGGE------NEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVM 224 (401)
Q Consensus 166 ~~~~-------~f~~~f~-------~-~~~~fg~~------~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~ 224 (401)
+++. .|..+|+ + |+.+||+. ..+...+.+|.|+.++|.|||||+|+|+++++.+.+.+.
T Consensus 81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~ 160 (391)
T PRK14284 81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKS 160 (391)
T ss_pred CCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeeecc
Confidence 1100 1111111 0 11113321 001123457899999999999999999999999999888
Q ss_pred cCC-CCC--------ccc-ccc--cceEEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccc
Q psy1364 225 KPA-LGT--------RKC-NCR--QEMQTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGM 280 (401)
Q Consensus 225 ~~~-~~~--------~~C-~c~--~~~~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv 280 (401)
|+. .|+ ..| .|. |.+... . |++++.+ ..+|+.|+|.+++.+.++++|.||||+
T Consensus 161 C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~-~--G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~ 237 (391)
T PRK14284 161 CDACSGSGANSSQGIKVCDRCKGSGQVVQS-R--GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGV 237 (391)
T ss_pred CCCCcccccCCCCCCeecCccCCeeEEEEE-e--ceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCC
Confidence 762 221 234 244 333322 2 4443222 245777788888899999999999999
Q ss_pred cCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCC-CcEEEEEcCCCCC
Q psy1364 281 KDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLD-GRKITVERQKITW 358 (401)
Q Consensus 281 ~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tld-G~~l~v~i~~~~~ 358 (401)
++|++|+|+|+|+++++ +.+|||||+|+++||+.|+|+|+||+++++|||.||++|++++|+|+| |+.++|+||++++
T Consensus 238 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~ 317 (391)
T PRK14284 238 DSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQ 317 (391)
T ss_pred CCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccC
Confidence 99999999999999985 688999999999999999999999999999999999999999999999 5679999999999
Q ss_pred CCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 359 PGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 359 ~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+|++++|+|+|||...+ +.+|||||+|+|.+|+. ||++|++
T Consensus 318 ~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~-l~~~q~~ 358 (391)
T PRK14284 318 SGTILKVRGQGFPNVHG-KGRGDLLVRISVETPQN-LSEEQKE 358 (391)
T ss_pred CCeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCC-CCHHHHH
Confidence 99999999999997643 36899999999999997 9999974
No 12
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.1e-67 Score=523.99 Aligned_cols=307 Identities=32% Similarity=0.522 Sum_probs=251.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCccc--
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMME-- 166 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~-- 166 (401)
.|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||++|+||.+|+.||+||++....++.++
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~ 81 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD-EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGF 81 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc-HHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCC
Confidence 699999999999999999999999999999999984 78999999999999999999999999999986432111000
Q ss_pred --cCCCCCCccCCCCcCCCCCC-c--cccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC-----------
Q psy1364 167 --GMDPFSSFFGDFGFHFGGEN-E--REREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG----------- 229 (401)
Q Consensus 167 --~~~~f~~~f~~~~~~fg~~~-~--~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~----------- 229 (401)
+++.|.++|+.| ||++. + ....+++|.|+.+.+.|||+|+|+|+++++.+++.+.|+ |.|
T Consensus 82 ~~~f~~~~d~f~~f---fgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~ 158 (378)
T PRK14278 82 GGGFGGLGDVFEAF---FGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVT 158 (378)
T ss_pred CcCcCchhHHHHHH---hCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCcee
Confidence 111222333322 33211 1 111345799999999999999999999999999998886 222
Q ss_pred CcccccccceEE-EEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCC
Q psy1364 230 TRKCNCRQEMQT-RQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHI 296 (401)
Q Consensus 230 ~~~C~c~~~~~~-~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~ 296 (401)
|..|++.|.+.. .+.++|++++.+ ...|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++++
T Consensus 159 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~ 238 (378)
T PRK14278 159 CDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGP 238 (378)
T ss_pred cCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCC
Confidence 123444454433 334556665432 2467888888899999999999999999999999999999988
Q ss_pred C-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCC
Q psy1364 297 D-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYEN 375 (401)
Q Consensus 297 ~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~ 375 (401)
+ +.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+|+..+.|.||+++++|++++|+|+|||...
T Consensus 239 ~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~- 317 (378)
T PRK14278 239 GGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLR- 317 (378)
T ss_pred CCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCC-
Confidence 6 57899999999999999999999999999999999999999999999776799999999999999999999999754
Q ss_pred CCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 376 NNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 376 ~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
.+.+|||||+|+|.||++ ||++||+
T Consensus 318 ~~~~GDL~V~~~V~~P~~-Ls~~qk~ 342 (378)
T PRK14278 318 SGGRGDLHAHVEVVVPTR-LDHEDIE 342 (378)
T ss_pred CCCCCCEEEEEEEEcCCC-CCHHHHH
Confidence 346899999999999997 9999974
No 13
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.8e-67 Score=525.31 Aligned_cols=307 Identities=29% Similarity=0.499 Sum_probs=253.8
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccC-c--
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEG-M-- 164 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~-- 164 (401)
..|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||+++++.+. .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE-PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence 4799999999999999999999999999999999985 77899999999999999999999999999998775321 1
Q ss_pred -c-cc------CCCCCCccCCCCcCCCCCC--ccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC----
Q psy1364 165 -M-EG------MDPFSSFFGDFGFHFGGEN--EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG---- 229 (401)
Q Consensus 165 -~-~~------~~~f~~~f~~~~~~fg~~~--~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~---- 229 (401)
+ ++ +..|.++|+. +||++. +....+++|.|+.++|.|||||+|+|+++++.+.+.+.|+ |.|
T Consensus 82 ~~~~~~~~~~~~~~~~d~f~~---~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~ 158 (380)
T PRK14276 82 GGFGGFDGSGGFGGFEDIFSS---FFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAK 158 (380)
T ss_pred CCCCCccccccccchhhHHHH---HhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccC
Confidence 0 01 1112233332 244321 1112345799999999999999999999999999998886 222
Q ss_pred -------Ccccccccce-EEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeC
Q psy1364 230 -------TRKCNCRQEM-QTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFT 289 (401)
Q Consensus 230 -------~~~C~c~~~~-~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~ 289 (401)
|..|++.|.+ ..+++++|++++.+ ...|+.|+|.|++.+.++++|.||||+++|++|+|+
T Consensus 159 ~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~ 238 (380)
T PRK14276 159 PGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQ 238 (380)
T ss_pred CCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEe
Confidence 1234444443 33456778776533 235777788888899999999999999999999999
Q ss_pred CCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCC
Q psy1364 290 AEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNE 368 (401)
Q Consensus 290 g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~ 368 (401)
|+|++.++ +.+|||+|+|++++|+.|+|+|+||+++++|||.||++|++++|+|+||+ ++|.||+++++|++++|+|+
T Consensus 239 G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~~~i~g~ 317 (380)
T PRK14276 239 GQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD-VELKIPAGTQTGKKFRLRGK 317 (380)
T ss_pred ccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCc-EEEEECCCCCCCCEEEECCC
Confidence 99999875 57899999999999999999999999999999999999999999999997 89999999999999999999
Q ss_pred CCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 369 GMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 369 G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
|||...+ +.+|||||+|+|.||+. ||++||+
T Consensus 318 G~p~~~~-~~~GDL~V~~~v~~P~~-l~~~q~~ 348 (380)
T PRK14276 318 GAPKLRG-GGNGDQHVTVNIVTPTK-LNDAQKE 348 (380)
T ss_pred CcCCCCC-CCCCCEEEEEEEECCCC-CCHHHHH
Confidence 9997643 35799999999999997 9999974
No 14
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.6e-67 Score=525.23 Aligned_cols=308 Identities=29% Similarity=0.514 Sum_probs=248.5
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc----
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE---- 162 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~---- 162 (401)
..+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||+||+.||+||+++...+
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~ 86 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR 86 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence 3579999999999999999999999999999999998778899999999999999999999999999997432110
Q ss_pred -----Ccccc--------CCCCCCccC-----------C-CCcCCCCCC--ccccccccCcceeecccccHHHHhcCceE
Q psy1364 163 -----GMMEG--------MDPFSSFFG-----------D-FGFHFGGEN--EREREVARGANIDIDLYVTLEELYNGNFV 215 (401)
Q Consensus 163 -----~~~~~--------~~~f~~~f~-----------~-~~~~fg~~~--~~~~~~~~g~di~~~l~vtlee~~~G~~~ 215 (401)
+..++ ...|.++|+ + |+.+||++. .+...+++|.|+.++|.|||+|+|+|+++
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~ 166 (392)
T PRK14279 87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM 166 (392)
T ss_pred cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence 00001 011222332 1 111243211 11123457999999999999999999999
Q ss_pred EEEeccccccC-CCC-----------CcccccccceEEEEecCceeEEE------------EeecCCCCCCceeeceeEE
Q psy1364 216 EVTRNKPVMKP-ALG-----------TRKCNCRQEMQTRQLGPGRFQMM------------QQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 216 ~v~~~~~~~~~-~~~-----------~~~C~c~~~~~~~~~g~g~~~~~------------~~~~C~~C~G~g~v~~~~~ 271 (401)
++.+.+.+.|+ |.| |..|++.|.+...+ |.+++. ....|+.|+|.+++.+.++
T Consensus 167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~ 243 (392)
T PRK14279 167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ---GAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRT 243 (392)
T ss_pred EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe---cceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeee
Confidence 99999998886 222 12344444333322 223221 1346888888899999999
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEE
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKIT 350 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~ 350 (401)
++|.||||+++|++|+|+|+|++.++ +.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++
T Consensus 244 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~-i~ 322 (392)
T PRK14279 244 INVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGP-VG 322 (392)
T ss_pred eEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCce-EE
Confidence 99999999999999999999999886 56799999999999999999999999999999999999999999999996 89
Q ss_pred EEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 351 VERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 351 v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
|+||+++++|++++|+|+|||.. .+.+|||||+|+|.||++ ||++||+
T Consensus 323 v~Ip~g~~~g~~iri~g~G~p~~--~~~~GDL~I~~~v~~P~~-Ls~~q~~ 370 (392)
T PRK14279 323 VKVPAGTADGRILRVRGRGVPKR--SGGAGDLLVTVKVAVPPN-LDGAAAE 370 (392)
T ss_pred EEECCCCCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCC-CCHHHHH
Confidence 99999999999999999999963 346899999999999997 9999984
No 15
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.4e-67 Score=526.69 Aligned_cols=310 Identities=35% Similarity=0.583 Sum_probs=252.3
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccC---cc
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEG---MM 165 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~---~~ 165 (401)
.|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||+||++++.... .+
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~~ 82 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGG 82 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCCC
Confidence 699999999999999999999999999999999987778999999999999999999999999999998775310 10
Q ss_pred c----cC----CCC---CCccCCCC-------c----CCCCCCccc--cccccCcceeecccccHHHHhcCceEEEEecc
Q psy1364 166 E----GM----DPF---SSFFGDFG-------F----HFGGENERE--REVARGANIDIDLYVTLEELYNGNFVEVTRNK 221 (401)
Q Consensus 166 ~----~~----~~f---~~~f~~~~-------~----~fg~~~~~~--~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~ 221 (401)
+ +. |.| ++||++.+ + +|+++..+. ..+.+|.|+.+.+.|||||+|+|+++++.+.+
T Consensus 83 ~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~r 162 (397)
T PRK14281 83 PGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKK 162 (397)
T ss_pred CCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEEEe
Confidence 0 11 112 23443210 0 011110000 12246899999999999999999999999999
Q ss_pred ccccC-CCC----------CcccccccceE-EEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEc
Q psy1364 222 PVMKP-ALG----------TRKCNCRQEMQ-TRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIE 277 (401)
Q Consensus 222 ~~~~~-~~~----------~~~C~c~~~~~-~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip 277 (401)
.+.|+ |.| |..|++.|.+. ..++++|.+++.+ ...|+.|+|.+++.+.++++|.||
T Consensus 163 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip 242 (397)
T PRK14281 163 QVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVTVP 242 (397)
T ss_pred eecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEEecC
Confidence 88876 222 22344445433 3345566665432 246778888888999999999999
Q ss_pred ccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCC
Q psy1364 278 MGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKI 356 (401)
Q Consensus 278 ~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~ 356 (401)
||+++|++|+|+|+|++.++ +.+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+|+||+ +.|.||++
T Consensus 243 ~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g 321 (397)
T PRK14281 243 AGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGA-VKLTIPAG 321 (397)
T ss_pred CCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCcc-EEEEeCCc
Confidence 99999999999999999885 58999999999999999999999999999999999999999999999996 89999999
Q ss_pred CCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 357 TWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 357 ~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+++|++++|+|+|||... .+.+|||||+|+|.||++ ||++||+
T Consensus 322 ~~~G~~~ri~g~G~P~~~-~~~~GDL~V~~~V~~P~~-Ls~~qk~ 364 (397)
T PRK14281 322 TQPETMLRIPGKGIGHLR-GSGRGDQYVRVNVFVPKE-VSHQDKE 364 (397)
T ss_pred cCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEEcCCC-CCHHHHH
Confidence 999999999999999754 346899999999999997 9999984
No 16
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.9e-67 Score=523.19 Aligned_cols=311 Identities=32% Similarity=0.573 Sum_probs=252.8
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc-c-
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM-M- 165 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~- 165 (401)
..|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||+++++.++. +
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~ 82 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS 82 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence 46999999999999999999999999999999999877889999999999999999999999999999987753211 0
Q ss_pred ccC---C-----CCCCccCCC-CcCCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC------
Q psy1364 166 EGM---D-----PFSSFFGDF-GFHFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG------ 229 (401)
Q Consensus 166 ~~~---~-----~f~~~f~~~-~~~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~------ 229 (401)
+++ + .|.++|..| |..|++..++...+++|.|+.++|.|||||+|+|+++++.+.+.+.|+ |.|
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 162 (380)
T PRK14297 83 GGFGGFDFSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPG 162 (380)
T ss_pred CCCCCcCcccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCC
Confidence 010 0 122333322 111111111112345799999999999999999999999999998886 222
Q ss_pred -----Ccccccccce-EEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCC
Q psy1364 230 -----TRKCNCRQEM-QTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAE 291 (401)
Q Consensus 230 -----~~~C~c~~~~-~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~ 291 (401)
|..|++.|.+ ..+++++|.+++.+ ...|..|+|.|++.+.++++|.||||+++|++|+++|+
T Consensus 163 ~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~ 242 (380)
T PRK14297 163 TSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQ 242 (380)
T ss_pred CcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecC
Confidence 2234444443 33456677655422 23566677778888899999999999999999999999
Q ss_pred CCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCC
Q psy1364 292 GEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGM 370 (401)
Q Consensus 292 G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~ 370 (401)
|++.+. +.+|||||+|++++|+.|+|+|+||+++++|||+||++|+++.|+|+||+ ++|.||+++++|++++|+|+||
T Consensus 243 G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g~G~ 321 (380)
T PRK14297 243 GEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKGKGV 321 (380)
T ss_pred ccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcCCCc
Confidence 998765 57899999999999999999999999999999999999999999999996 8999999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 371 PSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 371 p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
|... .+.+|||||+|+|.||++ ||++||+
T Consensus 322 p~~~-~~~~GDL~v~~~v~~P~~-ls~~q~~ 350 (380)
T PRK14297 322 PRVN-STGRGNQYVTVIVDIPKK-LNSKQKE 350 (380)
T ss_pred CCCC-CCCCCcEEEEEEEEcCCC-CCHHHHH
Confidence 9753 346899999999999996 9999984
No 17
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.5e-67 Score=518.84 Aligned_cols=312 Identities=33% Similarity=0.556 Sum_probs=254.5
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc--C-
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-DQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE--G- 163 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~--~- 163 (401)
..|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+||++|+.||+||++++... +
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 47999999999999999999999999999999999864 6789999999999999999999999999998776421 0
Q ss_pred -cccc--CCCCCC---ccC-C-CCcCCCCC-C--ccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC--
Q psy1364 164 -MMEG--MDPFSS---FFG-D-FGFHFGGE-N--EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG-- 229 (401)
Q Consensus 164 -~~~~--~~~f~~---~f~-~-~~~~fg~~-~--~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~-- 229 (401)
.+++ .+.|.. +|+ + |+..||+. . ++....++|.|+.+++.|||+|+|+|+++++.+.+.+.|+ |.|
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G 162 (369)
T PRK14282 83 ESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTG 162 (369)
T ss_pred CCCCcccccccccccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccC
Confidence 1111 111111 111 1 11224431 1 1112346799999999999999999999999999998886 222
Q ss_pred ---------Ccccccccce-EEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEe
Q psy1364 230 ---------TRKCNCRQEM-QTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTK 287 (401)
Q Consensus 230 ---------~~~C~c~~~~-~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~ 287 (401)
|..|++.|.+ ..+++++|++++.+ ...|+.|+|.+++.+.++++|.||||+.+|++|+
T Consensus 163 ~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~ 242 (369)
T PRK14282 163 VEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLR 242 (369)
T ss_pred CCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEE
Confidence 2234444543 34567888876543 1357777888888999999999999999999999
Q ss_pred eCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEc
Q psy1364 288 FTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKK 366 (401)
Q Consensus 288 ~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~ 366 (401)
|+|+|+++++ +.+|||+|+|+++||+.|+|+|+||+++++|||.||++|+++.|+|+||+.++|.||+++++|++++|+
T Consensus 243 ~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~ 322 (369)
T PRK14282 243 ITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLK 322 (369)
T ss_pred EecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEEC
Confidence 9999999765 578999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 367 NEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 367 g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
|+|||... .+.+|||||+|+|.+|+. |+.+|++
T Consensus 323 GkG~p~~~-~~~~GDL~V~~~v~~P~~-l~~~~~~ 355 (369)
T PRK14282 323 GKGLPNMR-YGRRGDLIVNVHVEIPKR-LSREERK 355 (369)
T ss_pred CCCCCCCC-CCCCCCEEEEEEEECCCC-CCHHHHH
Confidence 99999653 345899999999999996 9999863
No 18
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.2e-67 Score=519.35 Aligned_cols=305 Identities=34% Similarity=0.602 Sum_probs=251.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCcccc
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMMEG 167 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 167 (401)
..|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++.+++.+++
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g 82 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG 82 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence 47999999999999999999999999999999999877889999999999999999999999999999987753221111
Q ss_pred ----CCC---CCCccCCCCcCCC--CCC-ccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC-------
Q psy1364 168 ----MDP---FSSFFGDFGFHFG--GEN-EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG------- 229 (401)
Q Consensus 168 ----~~~---f~~~f~~~~~~fg--~~~-~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~------- 229 (401)
.++ |+++|++| || +.. .+...+.+|.|+.++|.|||||+|+|+++++.+.+.+.|+ |.|
T Consensus 83 ~~~~~~~~~~f~d~f~~~---fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~ 159 (373)
T PRK14301 83 FSSAEDIFSHFSDIFGDL---FGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGT 159 (373)
T ss_pred cccccccccchHHHHHHH---hhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCC
Confidence 122 23334432 33 111 1122346799999999999999999999999999988876 222
Q ss_pred ----CcccccccceEEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCC
Q psy1364 230 ----TRKCNCRQEMQTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGE 293 (401)
Q Consensus 230 ----~~~C~c~~~~~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~ 293 (401)
|..|++.|.+.. .. |++++.+ ...|+.|+|.|++.+.++++|.||||+++|++|+|+|+|+
T Consensus 160 ~~~~C~~C~G~G~v~~-~~--G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 236 (373)
T PRK14301 160 SPETCRHCGGSGQVRQ-SQ--GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGE 236 (373)
T ss_pred CCcccCCccCeeEEEE-Ee--eeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEecccc
Confidence 123334343332 22 3333221 2468888889999999999999999999999999999999
Q ss_pred CCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCC
Q psy1364 294 PHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPS 372 (401)
Q Consensus 294 ~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~ 372 (401)
+.++ +.+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++|.||+++++|++++|+|+|||.
T Consensus 237 ~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~ 315 (373)
T PRK14301 237 PGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPY 315 (373)
T ss_pred CCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCC
Confidence 9875 67899999999999999999999999999999999999999999999997 999999999999999999999997
Q ss_pred CCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 373 YENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 373 ~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
.. .+.+|||||+|+|.+|+. ||++|++
T Consensus 316 ~~-~~~~GDL~I~~~V~~P~~-l~~~q~~ 342 (373)
T PRK14301 316 LG-SSQKGDLLVEVSVVTPTK-LTKRQEE 342 (373)
T ss_pred CC-CCCCCCEEEEEEEECCCC-CCHHHHH
Confidence 64 346899999999999996 9999974
No 19
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-66 Score=520.43 Aligned_cols=307 Identities=32% Similarity=0.563 Sum_probs=249.5
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccc----cchhhhhccC
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQ----CGMECVKKEG 163 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~----~g~~~~~~~~ 163 (401)
..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||++|+||.+|+.||+ ||++++..++
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~~ 87 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPGP 87 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccCC
Confidence 579999999999999999999999999999999998777899999999999999999999999999 9988775311
Q ss_pred --c-ccc-----CCCCCCc------------cCC-CCcCCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccc
Q psy1364 164 --M-MEG-----MDPFSSF------------FGD-FGFHFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKP 222 (401)
Q Consensus 164 --~-~~~-----~~~f~~~------------f~~-~~~~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~ 222 (401)
. +++ .+.|+.+ |.+ |+.+||++. +....++|.|+.++|.|||||+|+|++++|.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~-~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~r~ 166 (389)
T PRK14295 88 GGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGG-RRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQ 166 (389)
T ss_pred CCCCCCCCCcccccccccccccccccccccchhhhhcccccCCC-CCCCCCCCCCEEEEEEEEHHHHhCCceEEEEeecc
Confidence 0 011 1112110 111 122244321 11234579999999999999999999999999999
Q ss_pred cccC-CCC-----------CcccccccceEEEEecCceeEEE------------EeecCCCCCCceeeceeEEEEEEEcc
Q psy1364 223 VMKP-ALG-----------TRKCNCRQEMQTRQLGPGRFQMM------------QQTVCDECPNVRFKNEEHHLEVEIEM 278 (401)
Q Consensus 223 ~~~~-~~~-----------~~~C~c~~~~~~~~~g~g~~~~~------------~~~~C~~C~G~g~v~~~~~l~V~Ip~ 278 (401)
+.|+ |.| |..|++.|.+...+ |.+++. ....|..|.|.|++.+.++++|.|||
T Consensus 167 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~ 243 (389)
T PRK14295 167 APCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS---GGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPA 243 (389)
T ss_pred ccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe---cceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCC
Confidence 8886 222 12333334333322 333321 12467778888888899999999999
Q ss_pred cccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCC
Q psy1364 279 GMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKIT 357 (401)
Q Consensus 279 Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~ 357 (401)
|+++|++|+|+|+|++.++ +.+|||+|+|++++|+.|+|+|+||+++++|||.+|++|++++|+|+||+.++|.||+++
T Consensus 244 G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~ 323 (389)
T PRK14295 244 GVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGT 323 (389)
T ss_pred CCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCcc
Confidence 9999999999999998765 578999999999999999999999999999999999999999999999988999999999
Q ss_pred CCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 358 WPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 358 ~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
++|++++|+|+|||.. ++.+|||||+|+|.||++ ||++||+
T Consensus 324 ~~g~~iri~G~G~p~~--~~~~GDL~i~~~v~~P~~-Ls~~qk~ 364 (389)
T PRK14295 324 PNGRVLRVRGKGAVRK--DGTRGDLLVTVEVAVPKD-LSGKARE 364 (389)
T ss_pred CCCcEEEECCCCcCCC--CCCCCCEEEEEEEECCCC-CCHHHHH
Confidence 9999999999999963 345899999999999997 9999984
No 20
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.5e-66 Score=513.92 Aligned_cols=306 Identities=34% Similarity=0.585 Sum_probs=250.2
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCcc-
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMM- 165 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~- 165 (401)
...|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||+||+++++.++.+
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~ 81 (366)
T PRK14294 2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSG 81 (366)
T ss_pred CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCC
Confidence 3579999999999999999999999999999999998778899999999999999999999999999999887532111
Q ss_pred -ccC----CCCCCccCCCCcCCC--CCC--ccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC------
Q psy1364 166 -EGM----DPFSSFFGDFGFHFG--GEN--EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG------ 229 (401)
Q Consensus 166 -~~~----~~f~~~f~~~~~~fg--~~~--~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~------ 229 (401)
+++ ..|+++|++| || +.. +......+|+|+.+++.|||||+|+|+++++.+.+.+.|+ |.|
T Consensus 82 ~~~~~~~~~~~~d~f~~~---fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~ 158 (366)
T PRK14294 82 FSGFDDIFSSFGDIFEDF---FGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPG 158 (366)
T ss_pred cCccccchhhhhhhHHHh---hccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCC
Confidence 111 1122333332 33 111 1112345799999999999999999999999999988876 222
Q ss_pred -----CcccccccceEEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCC
Q psy1364 230 -----TRKCNCRQEMQTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEG 292 (401)
Q Consensus 230 -----~~~C~c~~~~~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G 292 (401)
|..|++.|.+.. .. |++++.+ ...|+.|+|.|++.+.++++|.||||+++|++|+|+|+|
T Consensus 159 ~~~~~C~~C~G~G~~~~-~~--G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G 235 (366)
T PRK14294 159 TSPTTCPQCGGSGQVTQ-SQ--GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEG 235 (366)
T ss_pred CCcccCCCcCCeEEEEE-Ee--eeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCc
Confidence 122333333322 22 4443221 246778888889999999999999999999999999999
Q ss_pred CCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCC
Q psy1364 293 EPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMP 371 (401)
Q Consensus 293 ~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p 371 (401)
++.++ +.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++|.||+++++|++++|+|+|||
T Consensus 236 ~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p 314 (366)
T PRK14294 236 EAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIP 314 (366)
T ss_pred cCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCC
Confidence 98764 68999999999999999999999999999999999999999999999996 79999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 372 SYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 372 ~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
...+ +.+|||||+|+|.+|++ |+++|++
T Consensus 315 ~~~~-~~~GDL~V~~~v~~P~~-l~~~q~~ 342 (366)
T PRK14294 315 SLRG-GGRGDQIIEVEVKVPTR-LTKKQEE 342 (366)
T ss_pred CCCC-CCCCCEEEEEEEECCCC-CCHHHHH
Confidence 7543 36899999999999996 9999874
No 21
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.4e-66 Score=514.68 Aligned_cols=305 Identities=38% Similarity=0.631 Sum_probs=252.2
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc--c
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM--M 165 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--~ 165 (401)
..|||+||||+++||.+|||+|||+||++||||+|++++.|+++|++|++||++|+||.+|+.||+||++++..++. +
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 82 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG 82 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence 47999999999999999999999999999999999877889999999999999999999999999999987753211 0
Q ss_pred -cc----CCCCCCccCCCCcCCCCC-CccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC---------
Q psy1364 166 -EG----MDPFSSFFGDFGFHFGGE-NEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG--------- 229 (401)
Q Consensus 166 -~~----~~~f~~~f~~~~~~fg~~-~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~--------- 229 (401)
++ .|.|++||+.| ||++ ..+...+++|.|+.++|.|||||+|+|+++++.+.+.+.|+ |.|
T Consensus 83 ~~~~~~~~~~f~~~f~~~---fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~ 159 (371)
T PRK10767 83 FGGGGGFGDIFGDIFGDI---FGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSP 159 (371)
T ss_pred CCCccccccchhhhhhhh---ccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCC
Confidence 11 12344455443 4431 11122346799999999999999999999999999998886 222
Q ss_pred --CcccccccceEEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCC
Q psy1364 230 --TRKCNCRQEMQTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPH 295 (401)
Q Consensus 230 --~~~C~c~~~~~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~ 295 (401)
|..|++.|.+...+ |++++.+ ...|+.|+|.|++.+.++++|.||||+.+|++|+|+|+|++.
T Consensus 160 ~~C~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~ 236 (371)
T PRK10767 160 KTCPTCHGAGQVRMQQ---GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAG 236 (371)
T ss_pred ccCCCCCCeeEEEEee---ceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCC
Confidence 12334444333322 4443221 246888888889999999999999999999999999999987
Q ss_pred CC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCC
Q psy1364 296 ID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYE 374 (401)
Q Consensus 296 ~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~ 374 (401)
++ +.+|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|+|| .+.|.||+++++|++++|+|+|||...
T Consensus 237 ~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~ 315 (371)
T PRK10767 237 ERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDG-RVKLKIPEGTQTGKLFRLRGKGVKSVR 315 (371)
T ss_pred CCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCC-cEEEEeCCCCCCCCEEEECCCCcCCCC
Confidence 54 6799999999999999999999999999999999999999999999999 599999999999999999999999754
Q ss_pred CCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 375 NNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 375 ~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+ +.+|||||+|+|.+|+. |+++|++
T Consensus 316 ~-~~~GDL~v~~~v~~P~~-l~~~~~~ 340 (371)
T PRK10767 316 S-GARGDLYCQVVVETPVN-LTKRQKE 340 (371)
T ss_pred C-CCCCCEEEEEEEECCCC-CCHHHHH
Confidence 3 46899999999999996 9999873
No 22
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.4e-66 Score=514.40 Aligned_cols=311 Identities=35% Similarity=0.612 Sum_probs=250.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc-c-
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM-M- 165 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~- 165 (401)
..|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||++++...+. .
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 4699999999999999999999999999999999986 778999999999999999999999999999987653210 0
Q ss_pred --ccC---------CCCCCccCCCC--cCCCCC----Cc--cccccccCcceeecccccHHHHhcCceEEEEeccccccC
Q psy1364 166 --EGM---------DPFSSFFGDFG--FHFGGE----NE--REREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP 226 (401)
Q Consensus 166 --~~~---------~~f~~~f~~~~--~~fg~~----~~--~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~ 226 (401)
.++ +.|.+||+.|+ ..||+. .+ ....+.+|.|+.+.|.|||+|+|+|+++++.+.+.+.|.
T Consensus 81 ~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~ 160 (382)
T PRK14291 81 GQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCE 160 (382)
T ss_pred cccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCC
Confidence 010 12334433222 224431 00 012234789999999999999999999999999988876
Q ss_pred -CCCC--------ccc-ccccceEEEEecCceeEEE-----------EeecCCCCCCceeeceeEEEEEEEcccccCCCE
Q psy1364 227 -ALGT--------RKC-NCRQEMQTRQLGPGRFQMM-----------QQTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQ 285 (401)
Q Consensus 227 -~~~~--------~~C-~c~~~~~~~~~g~g~~~~~-----------~~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~ 285 (401)
|.|+ ..| .|.|.......+ |.+++. ....|+.|+|.|++.+.++++|.||||+++|++
T Consensus 161 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-g~~~~~~~C~~C~G~G~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~ 239 (382)
T PRK14291 161 ACGGTGYDPGSGEKVCPTCGGSGEIYQRG-GFFRISQTCPTCGGEGVLREPCSKCNGRGLVIKKETIKVRIPPGVDNGSK 239 (382)
T ss_pred CCccccCCCCCCCccCCCCCCceEEEEec-ceEEEEecCCCCCCceEEccCCCCCCCCceEEeeeEEEEEeCCCCCCCCE
Confidence 2221 123 244332222211 222221 135688888999999999999999999999999
Q ss_pred EeeCCCCCCCC-CCCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEE
Q psy1364 286 TKFTAEGEPHI-DGEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIR 364 (401)
Q Consensus 286 i~~~g~G~~~~-~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~ 364 (401)
|+|+|+|++++ ++.+|||||+|++++|+.|+|+|+||+++++|||.||++|+++.|+|+||+.++|.||+++++|++++
T Consensus 240 i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~ 319 (382)
T PRK14291 240 LRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIR 319 (382)
T ss_pred EEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEEE
Confidence 99999999987 47899999999999999999999999999999999999999999999999889999999999999999
Q ss_pred EcCCCCCCCCCCCCCccEEEEEEEECCCC-CCC------hhhhC
Q psy1364 365 KKNEGMPSYENNNAKGVLYITFDVEFPKN-ELS------EEEKE 401 (401)
Q Consensus 365 l~g~G~p~~~~~~~~GdL~i~~~v~~P~~-~ls------~~qk~ 401 (401)
|+|+|||...+ ..+|||||+|+|.||+. .|| ++||+
T Consensus 320 i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~ 362 (382)
T PRK14291 320 VPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKK 362 (382)
T ss_pred ECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHH
Confidence 99999997643 36899999999999983 499 88864
No 23
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.5e-65 Score=506.04 Aligned_cols=306 Identities=32% Similarity=0.591 Sum_probs=251.3
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc---C-c
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE---G-M 164 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~---~-~ 164 (401)
.|||+||||+++||.+|||+|||+||++||||++++ +.|+++|++|++||++|+|+.+|+.||+||++++... + +
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~ 81 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG 81 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-cCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCC
Confidence 699999999999999999999999999999999974 6788999999999999999999999999999876531 1 1
Q ss_pred c--cc-----CCCCCCccCCCCcCCCCCCc--cccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCCC----
Q psy1364 165 M--EG-----MDPFSSFFGDFGFHFGGENE--REREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALGT---- 230 (401)
Q Consensus 165 ~--~~-----~~~f~~~f~~~~~~fg~~~~--~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~~---- 230 (401)
+ ++ .++|++||+++ ||++.+ ....+.+|.|+.+.+.|||+|+|+|+++++.+.+.+.|+ |.|+
T Consensus 82 g~~~~~~~~~~~~f~~~f~~~---~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~ 158 (372)
T PRK14300 82 GNHGGFHPDINDIFGDFFSDF---MGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEK 158 (372)
T ss_pred CCCCccccchhhhHHHHHHhh---cCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCC
Confidence 1 11 12344555432 343211 111235789999999999999999999999999988876 2221
Q ss_pred ----cccc-cccceEEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCC
Q psy1364 231 ----RKCN-CRQEMQTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGE 293 (401)
Q Consensus 231 ----~~C~-c~~~~~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~ 293 (401)
..|. |.|...... ..|++++.+ ...|+.|+|.|++.+.++++|.||||+++|++|+++|+|+
T Consensus 159 ~~~~~~C~~C~G~G~~~~-~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~ 237 (372)
T PRK14300 159 GETVTTCDACSGVGATRM-QQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGE 237 (372)
T ss_pred CCCCccCCCccCeEEEEE-eeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEecccc
Confidence 2342 443322221 124444322 3468888899999999999999999999999999999999
Q ss_pred CCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCC
Q psy1364 294 PHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPS 372 (401)
Q Consensus 294 ~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~ 372 (401)
+.+. +.+|||+|+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||+.++|.||+++++|++++|+|+|||.
T Consensus 238 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~ 317 (372)
T PRK14300 238 AGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSK 317 (372)
T ss_pred CCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCC
Confidence 8754 689999999999999999999999999999999999999999999999988999999999999999999999997
Q ss_pred CCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 373 YENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 373 ~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
.. ...+|||||+|+|.||++ ||++||+
T Consensus 318 ~~-~~~~GDL~V~~~v~~P~~-ls~~qk~ 344 (372)
T PRK14300 318 MR-STIRGDMLTHIHVEVPKN-LSKRQRE 344 (372)
T ss_pred CC-CCCCCCEEEEEEEECCCC-CCHHHHH
Confidence 53 336899999999999997 9999984
No 24
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-64 Score=502.43 Aligned_cols=308 Identities=31% Similarity=0.553 Sum_probs=250.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCch-HHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCcc--
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDD-QAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMM-- 165 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~-- 165 (401)
.|||+||||+++||.+|||+|||+||++||||++++++ +|+++|++|++||++|+||.+|+.||+||++++..++.+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~ 82 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN 82 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence 69999999999999999999999999999999998764 789999999999999999999999999999876521110
Q ss_pred -cc-------CCCCCCccCCC-Cc-CCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC-----
Q psy1364 166 -EG-------MDPFSSFFGDF-GF-HFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG----- 229 (401)
Q Consensus 166 -~~-------~~~f~~~f~~~-~~-~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~----- 229 (401)
++ .|.|+.||+++ +. .|++........+++.|+.++|.|||+|+|+|+++++.+.+.+.|+ |.|
T Consensus 83 ~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~ 162 (365)
T PRK14290 83 WDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKN 162 (365)
T ss_pred ccccccccchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCC
Confidence 01 12344444421 10 0111011111123488999999999999999999999999988875 222
Q ss_pred -----CcccccccceEEEEecCceeEEEE--------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCC
Q psy1364 230 -----TRKCNCRQEMQTRQLGPGRFQMMQ--------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTA 290 (401)
Q Consensus 230 -----~~~C~c~~~~~~~~~g~g~~~~~~--------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g 290 (401)
|..|++.|.....+ ++|++.+.. ...|+.|+|.+++.+.++++|.||||+.+|++|+|+|
T Consensus 163 ~~~~~C~~C~G~G~~~~~~-~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g 241 (365)
T PRK14290 163 GKLITCPTCHGTGQQRIVR-GQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKG 241 (365)
T ss_pred CCCccCCCCCCcCEEEEEe-ccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEEcc
Confidence 12344445433332 456654432 3468888888999999999999999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCC
Q psy1364 291 EGEPHIDGEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGM 370 (401)
Q Consensus 291 ~G~~~~~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~ 370 (401)
+|++ +++.+|||||+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|++|. ++|.||+++++|++++|+|+||
T Consensus 242 ~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~G~ 319 (365)
T PRK14290 242 KGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGAGM 319 (365)
T ss_pred ccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCCCC
Confidence 9996 6788999999999999999999999999999999999999999999999995 9999999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 371 PSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 371 p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
|...+ ..+|||||+|+|.+|+. |+++|++
T Consensus 320 p~~~~-~~~GDL~V~~~V~~P~~-l~~~~~~ 348 (365)
T PRK14290 320 PHLNG-HGSGDLLVRINVEVPKR-LTSKQKE 348 (365)
T ss_pred CCCCC-CCCCCEEEEEEEECCCC-CCHHHHH
Confidence 97543 35899999999999996 9999873
No 25
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=1.2e-64 Score=502.04 Aligned_cols=305 Identities=37% Similarity=0.622 Sum_probs=252.0
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc--ccc
Q psy1364 90 DLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM--MEG 167 (401)
Q Consensus 90 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--~~~ 167 (401)
|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+|+.+|+.||+||++++..++. .++
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~ 79 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCC
Confidence 7999999999999999999999999999999997 4678899999999999999999999999999987753211 111
Q ss_pred CC--------CCCCccCCCCcCCCCC----CccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC-----
Q psy1364 168 MD--------PFSSFFGDFGFHFGGE----NEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG----- 229 (401)
Q Consensus 168 ~~--------~f~~~f~~~~~~fg~~----~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~----- 229 (401)
++ .|.++|..| ||++ .++....+++.|+.+++.|||||+|+|+++++.+.+.+.|+ |.|
T Consensus 80 ~~~~~~~~~~~~~~~f~~~---fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~ 156 (354)
T TIGR02349 80 FNGFDIGFFGDFGDIFGDF---FGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKP 156 (354)
T ss_pred cCCccccCcCchhhhHHHH---hccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCC
Confidence 11 122233222 3321 11123346799999999999999999999999999998876 222
Q ss_pred ------Ccccccccce-EEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCC
Q psy1364 230 ------TRKCNCRQEM-QTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTA 290 (401)
Q Consensus 230 ------~~~C~c~~~~-~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g 290 (401)
|..|++.|.+ ..+.+++|++++.+ ...|+.|+|.+++.+.++++|.||||+++|++|+|+|
T Consensus 157 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g 236 (354)
T TIGR02349 157 GTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSG 236 (354)
T ss_pred CCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEec
Confidence 2234444433 34457888876533 2357777888889999999999999999999999999
Q ss_pred CCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCC
Q psy1364 291 EGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEG 369 (401)
Q Consensus 291 ~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G 369 (401)
+|++.++ +.+|||+|+|++++|+.|+|+|+||++++.|||.||++|+++.|+|+|| .++|.||+++++|++++|+|+|
T Consensus 237 ~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G 315 (354)
T TIGR02349 237 KGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKG 315 (354)
T ss_pred CccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCC
Confidence 9998765 5789999999999999999999999999999999999999999999999 5999999999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 370 MPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 370 ~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
||..++ +.+|||||+|+|.+|++ |+++|++
T Consensus 316 ~p~~~~-~~~GDL~i~~~v~~P~~-l~~~~~~ 345 (354)
T TIGR02349 316 VPRLRG-NGRGDLLVTVKVETPKN-LSKEQKE 345 (354)
T ss_pred cCCCCC-CCCCCEEEEEEEECCCC-CCHHHHH
Confidence 997643 36899999999999997 9999974
No 26
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-64 Score=503.33 Aligned_cols=309 Identities=36% Similarity=0.563 Sum_probs=252.2
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCcc-
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMM- 165 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~- 165 (401)
...|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||++|+||.+|+.||+||++++...+..
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~~ 81 (378)
T PRK14283 3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQED 81 (378)
T ss_pred CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccccccc
Confidence 35799999999999999999999999999999999985 7899999999999999999999999999999876521100
Q ss_pred -----ccCCCCCCccCCC----Cc-CCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccccccC-CCC-----
Q psy1364 166 -----EGMDPFSSFFGDF----GF-HFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKP-ALG----- 229 (401)
Q Consensus 166 -----~~~~~f~~~f~~~----~~-~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~-~~~----- 229 (401)
+..+.|..|+++| .. .||+.. ...+++|.|+.+++.|||+|+|+|+++++.+.+.+.|+ |.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~--~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~ 159 (378)
T PRK14283 82 IFNNINFEDIFQGFGFGIGNIFDMFGFGGGS--RHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEP 159 (378)
T ss_pred cccccCccccccccccchhhhccccccCCCC--CCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCC
Confidence 0011222222111 11 133321 12245789999999999999999999999999888875 222
Q ss_pred ------Ccccccccce-EEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCC
Q psy1364 230 ------TRKCNCRQEM-QTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTA 290 (401)
Q Consensus 230 ------~~~C~c~~~~-~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g 290 (401)
|..|++.|.+ ..+++++|++++.. ...|..|+|.|++.+.++++|.||||+++|++|+|+|
T Consensus 160 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g 239 (378)
T PRK14283 160 GSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSG 239 (378)
T ss_pred CCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEec
Confidence 1233444433 33446666665432 2367788888889999999999999999999999999
Q ss_pred CCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCC
Q psy1364 291 EGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEG 369 (401)
Q Consensus 291 ~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G 369 (401)
+|++.+. +.+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+|| .+.|.||+++++|++++|+|+|
T Consensus 240 ~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g~G 318 (378)
T PRK14283 240 EGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHG 318 (378)
T ss_pred cccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECCCC
Confidence 9998764 6899999999999999999999999999999999999999999999999 6999999999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 370 MPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 370 ~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
||... .+.+|||||+|+|.||++ ||++|++
T Consensus 319 ~p~~~-~~~~GdL~v~~~v~~P~~-l~~~q~~ 348 (378)
T PRK14283 319 MPSLR-WSGKGNLYVKVKVVVPKK-LSPKQKE 348 (378)
T ss_pred CCCCC-CCCCCCEEEEEEEEeCCC-CCHHHHH
Confidence 99754 336899999999999997 9999974
No 27
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.1e-64 Score=500.58 Aligned_cols=308 Identities=34% Similarity=0.551 Sum_probs=253.1
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccC----
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEG---- 163 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~---- 163 (401)
..|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||+++++.++
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGG 83 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCCC
Confidence 5799999999999999999999999999999999998788999999999999999999999999999998765321
Q ss_pred ccc-cC---CCCCC---ccCCCCcCCCCC------C--ccccccccCcceeecccccHHHHhcCceEEEEeccccccCCC
Q psy1364 164 MME-GM---DPFSS---FFGDFGFHFGGE------N--EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPAL 228 (401)
Q Consensus 164 ~~~-~~---~~f~~---~f~~~~~~fg~~------~--~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~ 228 (401)
.++ ++ +.|+. +|+++ |++. . .......+|.|+.+.+.|||+|+|+|+++++.+.+.+.|+.+
T Consensus 84 ~~~~~~~~~~~f~~f~~~fg~~---~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C 160 (386)
T PRK14289 84 FSGEGMSMEDIFSMFGDIFGGH---GGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC 160 (386)
T ss_pred CCCCCcChhhhhHHhhhhhccc---ccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence 111 11 22222 23321 1110 0 011224578999999999999999999999999998887522
Q ss_pred -C-----------Ccccccccce-EEEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCC
Q psy1364 229 -G-----------TRKCNCRQEM-QTRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDG 283 (401)
Q Consensus 229 -~-----------~~~C~c~~~~-~~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G 283 (401)
| |..|++.|.+ ..+++++|.+++.. ...|+.|+|.|++.+.++++|.||||+++|
T Consensus 161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G 240 (386)
T PRK14289 161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEG 240 (386)
T ss_pred CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCC
Confidence 1 1234444443 33456667665422 246788888899999999999999999999
Q ss_pred CEEeeCCCCCCCC-CCCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcE
Q psy1364 284 QQTKFTAEGEPHI-DGEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGAR 362 (401)
Q Consensus 284 ~~i~~~g~G~~~~-~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~ 362 (401)
++|+++|+|++.+ ++.+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||+ ++|.||+++++|++
T Consensus 241 ~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~ 319 (386)
T PRK14289 241 MQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKV 319 (386)
T ss_pred CEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCce-EEEEECCccCCCcE
Confidence 9999999999876 467999999999999999999999999999999999999999999999996 89999999999999
Q ss_pred EEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 363 IRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 363 ~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+||+|+|||...+ +.+|||||+|+|.||++ ||++||+
T Consensus 320 ~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~-l~~~q~~ 356 (386)
T PRK14289 320 LRLRNKGLPSVNG-YGTGDLLVNVSVYIPET-LSKEEKQ 356 (386)
T ss_pred EEECCCCcCCCCC-CCCCcEEEEEEEEeCCC-CCHHHHH
Confidence 9999999997543 46899999999999996 9999984
No 28
>KOG0712|consensus
Probab=100.00 E-value=3.1e-64 Score=480.84 Aligned_cols=300 Identities=42% Similarity=0.716 Sum_probs=262.7
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCccc
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMME 166 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 166 (401)
.+..||+||||+++||++|||||||+||++|||||||+ |.++|++|++|||||+||++|++||+||++++..+++++
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~ 78 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGG 78 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCC
Confidence 35689999999999999999999999999999999976 789999999999999999999999999999998766555
Q ss_pred cCCCCCCccCCCCcCCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccccccCCCC-----------Cccccc
Q psy1364 167 GMDPFSSFFGDFGFHFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALG-----------TRKCNC 235 (401)
Q Consensus 167 ~~~~f~~~f~~~~~~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~-----------~~~C~c 235 (401)
++..|++||+ ||+.. .++..+|+|+.+.+.|||+|+|.|.+.++.++++++|+.+. |..|.+
T Consensus 79 g~~~f~~~F~-----~g~~~--~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~G 151 (337)
T KOG0712|consen 79 GFGGFSQFFG-----FGGNG--GRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRG 151 (337)
T ss_pred CCccHHHhcc-----CCCcC--ccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCC
Confidence 5444888876 33322 12233499999999999999999999999999999987321 123444
Q ss_pred cc-ceEEEEecCceeEEEEe---------------ecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCCCC
Q psy1364 236 RQ-EMQTRQLGPGRFQMMQQ---------------TVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHIDGE 299 (401)
Q Consensus 236 ~~-~~~~~~~g~g~~~~~~~---------------~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~g~ 299 (401)
.+ ...++++|||+.++.+. ..|+.|.|.+++...+.++|.|++|++++++|.+.|++++.++..
T Consensus 152 sGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~~ 231 (337)
T KOG0712|consen 152 SGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGTK 231 (337)
T ss_pred CCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCCc
Confidence 43 45678899998876652 379999999999999999999999999999999999999999988
Q ss_pred CccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCC--CCCCCcEEEEcCCCCCCCCCCC
Q psy1364 300 PGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQK--ITWPGARIRKKNEGMPSYENNN 377 (401)
Q Consensus 300 ~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~--~~~~g~~~~l~g~G~p~~~~~~ 377 (401)
+||+++.|..++|+.|.|+|+||++..+|++.||++|+.+.+.|+||+.+.+.+++ ++.||.+++|.|+|||+..++
T Consensus 232 pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~- 310 (337)
T KOG0712|consen 232 PGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP- 310 (337)
T ss_pred CccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC-
Confidence 99999999999999999999999999999999999999999999999999988765 789999999999999998766
Q ss_pred CCccEEEEEEEECCCCCCChhhh
Q psy1364 378 AKGVLYITFDVEFPKNELSEEEK 400 (401)
Q Consensus 378 ~~GdL~i~~~v~~P~~~ls~~qk 400 (401)
+|||||+|+|+||+ +++++.
T Consensus 311 -~g~lyi~~~v~fp~--~~~~~~ 330 (337)
T KOG0712|consen 311 -KGDLYIKFEVKFPK--LSPSQL 330 (337)
T ss_pred -CCcEEEEEEEEcCC--CChHHH
Confidence 99999999999998 677664
No 29
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-63 Score=495.09 Aligned_cols=309 Identities=32% Similarity=0.559 Sum_probs=253.4
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCc-c--
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGM-M-- 165 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~-- 165 (401)
.|||+||||+++||.+|||+|||+||++||||++++ +.|+++|++|++||++|+||.+|+.||+||++++..++. .
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~~ 81 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE-PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDM 81 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCCc
Confidence 699999999999999999999999999999999975 678899999999999999999999999999987653211 0
Q ss_pred cc----CCCCCCccCCCCcCCCCC--CccccccccCcceeecccccHHHHhcCceEEEEeccccccCC-CC---------
Q psy1364 166 EG----MDPFSSFFGDFGFHFGGE--NEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPA-LG--------- 229 (401)
Q Consensus 166 ~~----~~~f~~~f~~~~~~fg~~--~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~-~~--------- 229 (401)
++ .|.|++||++++. +++. ..+..++.++.|+.+++.|||||+|+|+++++++++.+.|+. .+
T Consensus 82 ~~~~~~~d~f~~~fg~~~~-~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~ 160 (374)
T PRK14293 82 GDMGGFADIFETFFSGFGG-AGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGP 160 (374)
T ss_pred ccccchHHHHHHHhcccCC-CCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCC
Confidence 11 1334455543210 0100 001123457899999999999999999999999999888752 22
Q ss_pred --CcccccccceE-EEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCC
Q psy1364 230 --TRKCNCRQEMQ-TRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEP 294 (401)
Q Consensus 230 --~~~C~c~~~~~-~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~ 294 (401)
|..|++.|.+. ..++++|++++.. ...|..|.|.+++.+.++++|.||||+++|++|+++|+|++
T Consensus 161 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~ 240 (374)
T PRK14293 161 TTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDA 240 (374)
T ss_pred eeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccC
Confidence 12344444433 3446777776532 23677888888888999999999999999999999999998
Q ss_pred CCC-CCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCC
Q psy1364 295 HID-GEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSY 373 (401)
Q Consensus 295 ~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~ 373 (401)
... +.+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+|+||+ ++|.||+++++|++++|+|+|||..
T Consensus 241 ~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~p~~ 319 (374)
T PRK14293 241 GLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVPRL 319 (374)
T ss_pred CCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCCCCC
Confidence 764 57899999999999999999999999999999999999999999999996 8999999999999999999999976
Q ss_pred CCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 374 ENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 374 ~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
.+.+.+|||||+|+|.||++ |+++|++
T Consensus 320 ~~~~~~GDL~v~~~v~~P~~-l~~~~~~ 346 (374)
T PRK14293 320 GNPVARGDHLITVKVKIPTR-ISDEERE 346 (374)
T ss_pred CCCCCcCCEEEEEEEECCCC-CCHHHHH
Confidence 55456899999999999996 9999974
No 30
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.2e-62 Score=488.11 Aligned_cols=305 Identities=31% Similarity=0.505 Sum_probs=249.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCcc---
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMM--- 165 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~--- 165 (401)
.|||+||||+++||.+|||+|||+||++||||++++ ++|+++|++|++||++|+||.+|+.||+||+++..+.+.+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~-~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~ 80 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE-KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPF 80 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCccc
Confidence 589999999999999999999999999999999974 7789999999999999999999999999998763211000
Q ss_pred c--cC---CCCCCccCCCCcCCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccccccCC-CC----------
Q psy1364 166 E--GM---DPFSSFFGDFGFHFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPA-LG---------- 229 (401)
Q Consensus 166 ~--~~---~~f~~~f~~~~~~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~-~~---------- 229 (401)
+ ++ +.|+.||++. .+++. ....+..+|.|+.+.+.|||+|+|+|+++++.+.+.+.|+. .|
T Consensus 81 ~~~~~d~~d~f~~~fg~~--~~~~~-~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~ 157 (371)
T PRK14292 81 GGMGFDPMDIFEQLFGGA--GFGGG-RGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPP 157 (371)
T ss_pred CccCCChHHHHHHhhCCC--CcCCC-CCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCC
Confidence 0 11 2244444321 11111 01123457999999999999999999999999998887752 11
Q ss_pred --CcccccccceE-EEEecCceeEEEE------------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCC
Q psy1364 230 --TRKCNCRQEMQ-TRQLGPGRFQMMQ------------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEP 294 (401)
Q Consensus 230 --~~~C~c~~~~~-~~~~g~g~~~~~~------------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~ 294 (401)
|..|++.|.+. ..+..+|++++.+ ...|+.|+|.|++.+.++++|.||||+.+|++|+|+|+|++
T Consensus 158 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~ 237 (371)
T PRK14292 158 KTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNE 237 (371)
T ss_pred ccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCC
Confidence 12344444433 3334556665432 24688888999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCC
Q psy1364 295 HIDGEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYE 374 (401)
Q Consensus 295 ~~~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~ 374 (401)
.+++. |||||+|++++|+.|+|+|+||+++++|+|.||++|+++.|+|+||+ +.|.||+++++|++++|+|+|||...
T Consensus 238 ~~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~ 315 (371)
T PRK14292 238 GPGGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPRLQ 315 (371)
T ss_pred CCCCC-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCCCC
Confidence 88766 99999999999999999999999999999999999999999999997 58999999999999999999999754
Q ss_pred CCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 375 NNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 375 ~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+ ..+|||||+|+|.+|+. ||++|++
T Consensus 316 ~-~~~GDL~V~~~v~~P~~-l~~~q~~ 340 (371)
T PRK14292 316 G-AGTGDLIVEYEIAVPKQ-LSPEARE 340 (371)
T ss_pred C-CCCCCEEEEEEEECCCC-CCHHHHH
Confidence 3 35799999999999996 9999974
No 31
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-58 Score=443.75 Aligned_cols=253 Identities=35% Similarity=0.614 Sum_probs=213.5
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc--Cc-
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE--GM- 164 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~--~~- 164 (401)
..|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||++++..+ +.
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~ 81 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS-PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP 81 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence 4799999999999999999999999999999999974 7789999999999999999999999999998754321 00
Q ss_pred ----c-ccC-----CCCCCccCCCCcCCCCC----C-----c-cccccccCcceeecccccHHHHhcCceEEEEeccccc
Q psy1364 165 ----M-EGM-----DPFSSFFGDFGFHFGGE----N-----E-REREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVM 224 (401)
Q Consensus 165 ----~-~~~-----~~f~~~f~~~~~~fg~~----~-----~-~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~ 224 (401)
+ .++ +.|+++|+.| ||+. . . .....++|.|+.+++.|||+|++.|+++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~f~~~---fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~---- 154 (291)
T PRK14299 82 PGPPGGGDFSGFNVGDFSDFFQQL---FGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA---- 154 (291)
T ss_pred CCCCCCCCccccCcCCHHHHHHHH---hCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC----
Confidence 0 110 1122223222 2210 0 0 012246789999999999999999999877531
Q ss_pred cCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCCCCCccEE
Q psy1364 225 KPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHIDGEPGDLI 304 (401)
Q Consensus 225 ~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~g~~GDL~ 304 (401)
.++++|.||||+++|++|+++|+|++. |||+
T Consensus 155 --------------------------------------------g~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~ 185 (291)
T PRK14299 155 --------------------------------------------GERLSVRIPPGVREGQVIRLAGKGRQG-----GDLY 185 (291)
T ss_pred --------------------------------------------CEEEEEecCCCcCCCcEEEECCCCCCC-----CCEE
Confidence 247899999999999999999999863 9999
Q ss_pred EEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEE
Q psy1364 305 FHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYI 384 (401)
Q Consensus 305 v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i 384 (401)
|+|++++|+.|+|+|+||+++++||+.+|++|+++.|+|+||+ ++|.||+++++|++++|+|+|||.. ++.+|||||
T Consensus 186 v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~--~~~~GDL~v 262 (291)
T PRK14299 186 LVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRG--PAGRGDQYA 262 (291)
T ss_pred EEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCCcCCCCEEEECCCCCCCC--CCCCCCEEE
Confidence 9999999999999999999999999999999999999999996 8999999999999999999999963 346899999
Q ss_pred EEEEECCCCCCChhhhC
Q psy1364 385 TFDVEFPKNELSEEEKE 401 (401)
Q Consensus 385 ~~~v~~P~~~ls~~qk~ 401 (401)
+|+|.+|++ |+++|++
T Consensus 263 ~~~V~~P~~-l~~~~~~ 278 (291)
T PRK14299 263 EVRITIPTR-PTPEEER 278 (291)
T ss_pred EEEEECCCC-CCHHHHH
Confidence 999999997 9999974
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=7.5e-57 Score=437.21 Aligned_cols=271 Identities=31% Similarity=0.533 Sum_probs=221.6
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchh----hhhcc-
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGME----CVKKE- 162 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~----~~~~~- 162 (401)
..|||++|||+++||.+|||+|||+||++||||++++ +.|+++|++|++||++|+||.+|+.||+||.. ++...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~-~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~ 81 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE-PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQF 81 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccccc
Confidence 3699999999999999999999999999999999875 67899999999999999999999999999864 22210
Q ss_pred Cccc----cCCCCCCccCCCCcCCCCCC--ccccccccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccc
Q psy1364 163 GMME----GMDPFSSFFGDFGFHFGGEN--EREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCR 236 (401)
Q Consensus 163 ~~~~----~~~~f~~~f~~~~~~fg~~~--~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~ 236 (401)
+.++ +...|.++|+.+ ||+.. .+....++|.|+.+++.|||+|++.|+++++.+.+.++| +
T Consensus 82 ~~~~~~~~~~~~~~~~f~~~---~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~---------g- 148 (306)
T PRK10266 82 QHGDGQSFNAEDFDDIFSSI---FGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYN---------A- 148 (306)
T ss_pred ccCCCCCCCCCCHHHHHHHH---hCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccccc---------C-
Confidence 0000 111233333322 33211 112234578999999999999999999999887665321 1
Q ss_pred cceEEEEecCceeEEEEeecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCc
Q psy1364 237 QEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRF 315 (401)
Q Consensus 237 ~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f 315 (401)
.|.++ ....++++|.||||+++|++|+++|+|++.++ +.+|||+|+|+++||+.|
T Consensus 149 ---------~G~~~---------------~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f 204 (306)
T PRK10266 149 ---------FGMIE---------------QEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLF 204 (306)
T ss_pred ---------CCeEE---------------EeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEEEcCCCCe
Confidence 11111 11246899999999999999999999999775 578999999999999999
Q ss_pred cccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCC
Q psy1364 316 ERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNEL 395 (401)
Q Consensus 316 ~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~l 395 (401)
+|+|+||+++++||+.+|++|+++.|+|++|+ +.|.||+++++|++++|+|+|||.. +.+|||||+|+|.+|++ |
T Consensus 205 ~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g~~~g~~~ri~g~G~p~~---~~~GdL~v~~~v~~P~~-l 279 (306)
T PRK10266 205 DIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSK---KQTGDLYAVLKIVMPPK-P 279 (306)
T ss_pred EEeCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCCcCCCCEEEECCCCCCCC---CCCCCEEEEEEEECCCC-C
Confidence 99999999999999999999999999999996 8999999999999999999999964 24899999999999997 9
Q ss_pred ChhhhC
Q psy1364 396 SEEEKE 401 (401)
Q Consensus 396 s~~qk~ 401 (401)
|++||+
T Consensus 280 ~~~q~~ 285 (306)
T PRK10266 280 DEKTAA 285 (306)
T ss_pred CHHHHH
Confidence 999984
No 33
>KOG0713|consensus
Probab=100.00 E-value=3.4e-55 Score=413.31 Aligned_cols=312 Identities=60% Similarity=0.997 Sum_probs=288.3
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc--
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE-- 162 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-- 162 (401)
....+|||+||||+++||..|||+||||||++|||||||+||.|.+.|++|+.||+||+||++|+.||+||+++++.+
T Consensus 12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~ 91 (336)
T KOG0713|consen 12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENK 91 (336)
T ss_pred hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccc
Confidence 445799999999999999999999999999999999999999999999999999999999999999999999999853
Q ss_pred -Cccc-c-CCCCCCccCCCCcCCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccce
Q psy1364 163 -GMME-G-MDPFSSFFGDFGFHFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEM 239 (401)
Q Consensus 163 -~~~~-~-~~~f~~~f~~~~~~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~ 239 (401)
+.++ + .++|+.||++||..+++... ....++|.++...++.+++++|.|...+..+.+.+.+.+.++..|+|.-.+
T Consensus 92 ~~~~g~~~~~~f~~~f~dfg~~~~g~~~-~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~~~ 170 (336)
T KOG0713|consen 92 DGEGGGGGNDIFSAFFGDFGVTVGGNPL-EEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRLEM 170 (336)
T ss_pred ccccCCcccchHHHhhcccccccCCCcc-cCCCCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcccccCChhhh
Confidence 2222 2 58999999999887776543 233788999999999999999999998888888999999999999999999
Q ss_pred EEEEecCceeEEEEeecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCCCCCccEEEEEEEeCCCCccccC
Q psy1364 240 QTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHIDGEPGDLIFHIRTLPHPRFERRG 319 (401)
Q Consensus 240 ~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~g~~GDL~v~i~v~~h~~f~r~g 319 (401)
..++.++|++++.|...|++|.+.+...++...++.+..|...|....+..+|.+...+.+||+.+.+..-+|+.|.|++
T Consensus 171 ~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~ 250 (336)
T KOG0713|consen 171 FTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKG 250 (336)
T ss_pred eeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCCcceecccCCceeeeEEecccceecCc
Confidence 99999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred CCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCCh
Q psy1364 320 DDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSE 397 (401)
Q Consensus 320 ~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~ 397 (401)
+|+++++.+++.+++.|+...+.++|+..+.+....++.|+..++.+++|||..++....|++++.|.+.+|.+.+|+
T Consensus 251 ~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 251 DDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred cchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence 999999999999999999999999999878888888899999999999999988888889999999999999764554
No 34
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=2.1e-42 Score=354.39 Aligned_cols=157 Identities=17% Similarity=0.171 Sum_probs=138.0
Q ss_pred cceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEEEEE
Q psy1364 196 ANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVE 275 (401)
Q Consensus 196 ~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~ 275 (401)
-+|.+.+.|||+++|+|+++++.+.|.+.| |.|...+.+.++++|.
T Consensus 657 ~dI~y~l~vtLEeLY~G~tKkIKitR~V~~----------------------------------g~G~ktvkE~ktLeVk 702 (871)
T TIGR03835 657 VNLVYEEEVPQILFFNNQIKEIKYTRHTVD----------------------------------GNTESTTNEAITLEIQ 702 (871)
T ss_pred cceEEecccCHHHHhCCCeEEEEEEEeecc----------------------------------CCCcceeeeeEEEEEe
Confidence 345677889999999999999988766543 1222345567899999
Q ss_pred EcccccCCCEEeeCCCCCCCCCCCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCC
Q psy1364 276 IEMGMKDGQQTKFTAEGEPHIDGEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQK 355 (401)
Q Consensus 276 Ip~Gv~~G~~i~~~g~G~~~~~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~ 355 (401)
||||+++|++|+|+|+|++++++. |||||+|++++|+.|+|+|+||++++.|+|.+||+|+++.|+||||+ +.|.||+
T Consensus 703 IPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPp 780 (871)
T TIGR03835 703 LPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPG 780 (871)
T ss_pred cCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCC
Confidence 999999999999999999877664 99999999999999999999999999999999999999999999996 8999999
Q ss_pred CCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEEC
Q psy1364 356 ITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEF 390 (401)
Q Consensus 356 ~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~ 390 (401)
++++|+++||+|+|||.. ++.+|||||+|+|.-
T Consensus 781 gTqpGqvLRIkGKGMP~~--~~~RGDLyV~f~V~~ 813 (871)
T TIGR03835 781 GIKVNDQVIFKDLGLTKT--KYDKGSLIVHLYYSS 813 (871)
T ss_pred CCCCCcEEEECCCCCCCC--CCCCCCEEEEEEEee
Confidence 999999999999999953 346899999999863
No 35
>KOG0715|consensus
Probab=99.98 E-value=1.2e-32 Score=263.65 Aligned_cols=222 Identities=33% Similarity=0.531 Sum_probs=171.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCccccC
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMMEGM 168 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~~ 168 (401)
.|||+||||+++|+..|||+||++||++||||.|.+ ++|+++|++|.+|||+|+|+++|..||++|..+.. +..+...
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~-~~~g~~~ 120 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQHG-EFGGNPF 120 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccc-cccCCcc
Confidence 499999999999999999999999999999999987 58999999999999999999999999999987611 1111122
Q ss_pred CCCCCccCCCCcCCCCCCccccccccCcceeecccccHHHHhcCceEEEEeccccccCCC-C-----------Ccccccc
Q psy1364 169 DPFSSFFGDFGFHFGGENEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPAL-G-----------TRKCNCR 236 (401)
Q Consensus 169 ~~f~~~f~~~~~~fg~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~-~-----------~~~C~c~ 236 (401)
+.|..+|+ +. ......+.+..+.+.++|+++..|+.+.+.++....|... + +..|.+.
T Consensus 121 ~~~~~~~~-------~~---~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~ 190 (288)
T KOG0715|consen 121 DVFLEFFG-------GK---MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTCSGR 190 (288)
T ss_pred chHHHhhc-------cc---ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccccccchhhhCc
Confidence 33333333 20 1223446678888999999999999888888877766421 1 1233333
Q ss_pred cceEEE------------EecCceeEEEEeecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCCCCCccEE
Q psy1364 237 QEMQTR------------QLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHIDGEPGDLI 304 (401)
Q Consensus 237 ~~~~~~------------~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~g~~GDL~ 304 (401)
+..... +.+.|. +-...|..|.|.+.+...+.+.|.+|+|+.++.+|++.+.|.. ||+
T Consensus 191 ~~~~~~~~~~f~~~~~~~c~~~~~---~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~-------~l~ 260 (288)
T KOG0715|consen 191 GLVSNPKEDPFILYTCSYCLGRGL---VLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND-------DLF 260 (288)
T ss_pred ccccccccCCcceeecccccccce---eccchHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc-------eEE
Confidence 311111 111111 1123488999999999999999999999999999999999864 999
Q ss_pred EEEEEeCCCCccccCCCcEEEEEecHHH
Q psy1364 305 FHIRTLPHPRFERRGDDLYTNITISLQD 332 (401)
Q Consensus 305 v~i~v~~h~~f~r~g~Dl~~~~~I~l~e 332 (401)
|.+.|.+++.|+|+|.|+++++.|++.+
T Consensus 261 v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 261 VRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred EEEEeccCcccccccCcccccccccccC
Confidence 9999999999999999999999998754
No 36
>KOG0714|consensus
Probab=99.90 E-value=7.3e-23 Score=197.13 Aligned_cols=251 Identities=35% Similarity=0.580 Sum_probs=188.6
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccCcc-
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-DQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEGMM- 165 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~- 165 (401)
..|||++|+|.++|+.+||++|||++|++||||+++.. ..|+++|++|++||++|+|+.+|..||+||++++.+.+..
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~ 81 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS 81 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence 46899999999999999999999999999999998875 2466689999999999999999999999999776642110
Q ss_pred ----cc---------CCCCCCccCCCCc------------------CCCCC---Cc---c-----------ccccccCcc
Q psy1364 166 ----EG---------MDPFSSFFGDFGF------------------HFGGE---NE---R-----------EREVARGAN 197 (401)
Q Consensus 166 ----~~---------~~~f~~~f~~~~~------------------~fg~~---~~---~-----------~~~~~~g~d 197 (401)
.+ .+.|..||+.-.. .|+.. .. . .........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T KOG0714|consen 82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP 161 (306)
T ss_pred CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence 00 1123334431000 00000 00 0 001111222
Q ss_pred eeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEEEEEEc
Q psy1364 198 IDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVEIE 277 (401)
Q Consensus 198 i~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip 277 (401)
+...+.+++++++.|+.....+.+...-. ... ..........+.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~----~~~~~~~~~~~~~~ 207 (306)
T KOG0714|consen 162 VEHPLRVSLEDLYKGESKKMKISRQSFTS------------------------------NGR----EGSSRSRYLSISIK 207 (306)
T ss_pred ccCCcceeHHHhccccceeeecccccccC------------------------------Ccc----cccCccceeEEecc
Confidence 44445557888888877666554332110 000 02345678899999
Q ss_pred ccccCCCEEeeCCCCCCCCCCCCccEEEEEEEeCCCCccccCCCcEEE--EEecHHHHcCCCEEEEecCCCcEEEEEcC-
Q psy1364 278 MGMKDGQQTKFTAEGEPHIDGEPGDLIFHIRTLPHPRFERRGDDLYTN--ITISLQDALTGFKFDIDQLDGRKITVERQ- 354 (401)
Q Consensus 278 ~Gv~~G~~i~~~g~G~~~~~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~--~~I~l~eAl~G~~~~i~tldG~~l~v~i~- 354 (401)
+++..|+.+....+|+..++..|-++++.+..++|+.|.+.+.||... ..|++.+|++|....+++++|..+.+.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (306)
T KOG0714|consen 208 PGWKEGTKITFPEEGDEEPGILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINK 287 (306)
T ss_pred CCcccccceeccccccccCCcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccc
Confidence 999999999999999988888899999999999999999999999999 99999999999999999999987777777
Q ss_pred CCCCCCcEEEEcCCCCCC
Q psy1364 355 KITWPGARIRKKNEGMPS 372 (401)
Q Consensus 355 ~~~~~g~~~~l~g~G~p~ 372 (401)
..+.++...+++++|+|.
T Consensus 288 ~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 288 DLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred cccCCCceeeecCCCCCC
Confidence 788999999999999985
No 37
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.86 E-value=4.1e-22 Score=156.01 Aligned_cols=80 Identities=45% Similarity=0.726 Sum_probs=69.7
Q ss_pred CcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhh
Q psy1364 321 DLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEK 400 (401)
Q Consensus 321 Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk 400 (401)
||+++++||++||++|+++.|+|+||+.++|++|+++++|++++|+|+|||...+++.+|||||+|+|.+|++ ||++||
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~-ls~~qk 79 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKK-LSPEQK 79 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SS-TSHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCC-CCHHHh
Confidence 8999999999999999999999999988999999999999999999999998877668999999999999997 999998
Q ss_pred C
Q psy1364 401 E 401 (401)
Q Consensus 401 ~ 401 (401)
+
T Consensus 80 ~ 80 (81)
T PF01556_consen 80 E 80 (81)
T ss_dssp H
T ss_pred c
Confidence 5
No 38
>KOG0721|consensus
Probab=99.82 E-value=1.1e-20 Score=168.39 Aligned_cols=130 Identities=27% Similarity=0.397 Sum_probs=98.9
Q ss_pred CccceeEeeeehhhcccchhhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcCCcccccccCCCCCCCCCCCCCCcc
Q psy1364 10 FSSSLFYCILTIFRKNYLHKRSVMTLLRRFYSFLKYFVFVIMAVVFIVLLLEHFTDPPKVKRTHRGFNPYPPRPKASKER 89 (401)
Q Consensus 10 ~~~~~~~c~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (401)
.+.....|.|+-|.....+..+ ..+..-+.....+++++|+.+.++........ +. ....
T Consensus 40 ~~~~~~~c~c~~c~~~r~~~~~----~~~k~~~~~~~i~lv~~W~v~~fL~y~i~~~~---~~-------------~~~f 99 (230)
T KOG0721|consen 40 PPKRKEECQCHGCDKKRRKKAK----VSPKSISTKRKVFLVVGWAVIAFLIYKIMNSR---RE-------------RQKF 99 (230)
T ss_pred hhhhhhHHhhhhhhhhhhhhcc----cCcccchhHHHHHHHHHHHHHHHHHHHHhhhh---HH-------------hhcC
Confidence 3455678999987765443221 22222334455677888888888887764322 22 3345
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhh
Q psy1364 90 DLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECV 159 (401)
Q Consensus 90 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 159 (401)
|+|+||||+++||+.|||+|||+|+++|||||++...+.++.|..|++||+.|+|+..|++|.+||....
T Consensus 100 DPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 100 DPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred CcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 6679999999999999999999999999999998756678889999999999999999999999997643
No 39
>KOG0716|consensus
Probab=99.81 E-value=1.5e-20 Score=173.07 Aligned_cols=75 Identities=49% Similarity=0.777 Sum_probs=71.8
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
...|+|+|||++++|+.++||||||+|+++||||+++++|++.++|++||+||+||+||.+|..||+||+.++..
T Consensus 29 ~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~l 103 (279)
T KOG0716|consen 29 IRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLKL 103 (279)
T ss_pred chhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHHH
Confidence 378999999999999999999999999999999999999999999999999999999999999999999988864
No 40
>KOG0691|consensus
Probab=99.77 E-value=1e-19 Score=173.26 Aligned_cols=74 Identities=47% Similarity=0.757 Sum_probs=70.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
..|||++|||+.+||..||++|||+.|++|||||||+||.|.++|+.+.+||+||+|+.+|+.||++|..+...
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~ 77 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA 77 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999876643
No 41
>KOG0718|consensus
Probab=99.77 E-value=2.6e-19 Score=174.94 Aligned_cols=78 Identities=42% Similarity=0.733 Sum_probs=71.3
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND---DQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
...+.|||.+|+|+++||.+|||+|||++++.|||||..+. ..|++.|+.|.+|||||+||.+|++||.||++|++.
T Consensus 5 e~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t 84 (546)
T KOG0718|consen 5 ELDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT 84 (546)
T ss_pred ccchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc
Confidence 44567999999999999999999999999999999999742 459999999999999999999999999999999984
Q ss_pred c
Q psy1364 162 E 162 (401)
Q Consensus 162 ~ 162 (401)
.
T Consensus 85 ~ 85 (546)
T KOG0718|consen 85 E 85 (546)
T ss_pred c
Confidence 3
No 42
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.76 E-value=4.8e-19 Score=186.88 Aligned_cols=79 Identities=30% Similarity=0.521 Sum_probs=72.3
Q ss_pred CCCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc
Q psy1364 83 PKASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE 162 (401)
Q Consensus 83 ~~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 162 (401)
.......+||+||||+++||..|||+|||+||++||||+++++ .|.++|++|++||++|+||.+|+.||+||.+++...
T Consensus 567 t~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~ 645 (1136)
T PTZ00341 567 TIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGV 645 (1136)
T ss_pred cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCC
Confidence 3345678999999999999999999999999999999999874 688899999999999999999999999999887654
No 43
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=1.3e-17 Score=153.54 Aligned_cols=188 Identities=31% Similarity=0.483 Sum_probs=124.5
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchH-HHHHHHHHhHhhhhcchhhhhhhccccc-hhhhhccCc
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQ-AQAKFQELGAAYEILSDEKKRQRYDQCG-MECVKKEGM 164 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~-a~~~f~~i~~Ay~~L~d~~~r~~yd~~g-~~~~~~~~~ 164 (401)
...+||+||||+++|+..||++|||++|++||||+++.++. |+++|+.|++||++|+|+.+|+.||+++ .........
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~~ 83 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKSY 83 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCccccc
Confidence 46799999999999999999999999999999999998775 9999999999999999999999999984 322221110
Q ss_pred c----ccCC---CCCCccCCC-Cc----------------CCCCCC------c---cccccccCc-ceeecccccHHHHh
Q psy1364 165 M----EGMD---PFSSFFGDF-GF----------------HFGGEN------E---REREVARGA-NIDIDLYVTLEELY 210 (401)
Q Consensus 165 ~----~~~~---~f~~~f~~~-~~----------------~fg~~~------~---~~~~~~~g~-di~~~l~vtlee~~ 210 (401)
. ...+ .+..++... +. .+.+.. . .......+. +....+.+++.+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (237)
T COG2214 84 RESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSRGLSGLAAALSLFADEAALRSGSLRRRDLAANLADNFEEAL 163 (237)
T ss_pred cccccccccccccHHHHHHhhcccccccccccchhhhcccccccccccccccccccccccccccccceeeeeeccHHHHh
Confidence 0 0000 111111100 00 000000 0 000000000 22233333444444
Q ss_pred cCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCC
Q psy1364 211 NGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTA 290 (401)
Q Consensus 211 ~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g 290 (401)
.+....+.+ .......+.+|.|+..+..+++.+
T Consensus 164 ~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 196 (237)
T COG2214 164 AGVKKAVAR-----------------------------------------------LLGKALKSTIKAGALEGKALRLKG 196 (237)
T ss_pred cCcceeeec-----------------------------------------------cccccccccCCcccccCceeeecc
Confidence 333322211 112223389999999999999999
Q ss_pred CCCCCCCCCCccEEEEEEEeCCCCccccCCCc
Q psy1364 291 EGEPHIDGEPGDLIFHIRTLPHPRFERRGDDL 322 (401)
Q Consensus 291 ~G~~~~~g~~GDL~v~i~v~~h~~f~r~g~Dl 322 (401)
++.... +..++.+..+..++|+.|...++|+
T Consensus 197 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (237)
T COG2214 197 LLKSAR-GALGKARLKELSKRHPPFALEGDDK 227 (237)
T ss_pred cCCcCC-CCcccceeeeeccCCCCccccCCcc
Confidence 998777 8889999999999999999999999
No 44
>KOG0717|consensus
Probab=99.74 E-value=1.1e-18 Score=170.44 Aligned_cols=77 Identities=47% Similarity=0.752 Sum_probs=71.4
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-DQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
+...+.||+||||.++|++.|||++||+||++|||||||+. ++|.++|+.|+.||+|||||..|+.||.+.++.+.+
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~ 81 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRG 81 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcC
Confidence 44678999999999999999999999999999999999875 679999999999999999999999999999987764
No 45
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.73 E-value=2.6e-18 Score=128.23 Aligned_cols=63 Identities=52% Similarity=0.956 Sum_probs=59.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCch-HHHHHHHHHhHhhhhcchhhhhhhcc
Q psy1364 90 DLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDD-QAQAKFQELGAAYEILSDEKKRQRYD 152 (401)
Q Consensus 90 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd 152 (401)
|||+||||+++++.++||+||+++++++|||+++.+. .+++.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999987755 68899999999999999999999998
No 46
>KOG0719|consensus
Probab=99.69 E-value=1.7e-17 Score=149.28 Aligned_cols=72 Identities=51% Similarity=0.811 Sum_probs=65.7
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--chHHHHHHHHHhHhhhhcchhhhhhhccccchh
Q psy1364 86 SKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPN--DDQAQAKFQELGAAYEILSDEKKRQRYDQCGME 157 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 157 (401)
....|+|+||||.++|+..+|++||++||++||||+++. +.+|.++|+.++.||.||+|.++|+.||+.|.-
T Consensus 11 f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i 84 (264)
T KOG0719|consen 11 FNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI 84 (264)
T ss_pred ccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence 345699999999999999999999999999999999953 357899999999999999999999999998863
No 47
>KOG0624|consensus
Probab=99.69 E-value=3.6e-17 Score=155.28 Aligned_cols=90 Identities=42% Similarity=0.727 Sum_probs=74.6
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCch---HHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDD---QAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
.+..+|||+||||.++|+..||.||||++|.+||||-..+.+ .|+++|..|..|-|||+||++|+.||. |++.+..
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD~ 468 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLDP 468 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCCh
Confidence 456799999999999999999999999999999999987653 489999999999999999999999997 6665653
Q ss_pred c-CccccCCCCCCcc
Q psy1364 162 E-GMMEGMDPFSSFF 175 (401)
Q Consensus 162 ~-~~~~~~~~f~~~f 175 (401)
. +.++|++||..|.
T Consensus 469 Es~q~GGGg~~Hgf~ 483 (504)
T KOG0624|consen 469 ESQQGGGGGPFHGFW 483 (504)
T ss_pred hhccCCCCCCCCCCc
Confidence 3 2233445666554
No 48
>PHA03102 Small T antigen; Reviewed
Probab=99.68 E-value=2.2e-17 Score=142.90 Aligned_cols=68 Identities=26% Similarity=0.470 Sum_probs=62.7
Q ss_pred cCcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhh
Q psy1364 89 RDLYEVLGVPRNA--DSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVK 160 (401)
Q Consensus 89 ~~~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 160 (401)
+.+|+||||+++| |.+|||+|||++|+++|||++++ +++|++|++||++|+|+.+|..||.+|.+...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~ 74 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSS 74 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCcccc
Confidence 5689999999999 99999999999999999999864 46899999999999999999999999987554
No 49
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.64 E-value=3e-16 Score=115.45 Aligned_cols=59 Identities=58% Similarity=0.978 Sum_probs=54.6
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-chHHHHHHHHHhHhhhhcchhhh
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPN-DDQAQAKFQELGAAYEILSDEKK 147 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~a~~~f~~i~~Ay~~L~d~~~ 147 (401)
.|||+||||+++++.++||+|||++++++|||++++ .+.+++.|++|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999999999999985 47788999999999999999853
No 50
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.61 E-value=9.6e-16 Score=110.60 Aligned_cols=55 Identities=58% Similarity=1.011 Sum_probs=51.7
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcch
Q psy1364 90 DLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSD 144 (401)
Q Consensus 90 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d 144 (401)
|||++|||+++++.++||++||+|++++|||+++..+.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999999999997656688999999999999986
No 51
>KOG0550|consensus
Probab=99.51 E-value=9.2e-15 Score=141.95 Aligned_cols=87 Identities=48% Similarity=0.786 Sum_probs=73.3
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhccC
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-DQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKEG 163 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~ 163 (401)
.++.+|||.||||+++||..|||+|||++|+.||||++... .+++.+|+++-+||.+|+||.+|..||. |.+--+.++
T Consensus 369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds-g~dle~~~~ 447 (486)
T KOG0550|consen 369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS-GQDLEEVGS 447 (486)
T ss_pred HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc-ccchhhhcC
Confidence 45689999999999999999999999999999999999876 6799999999999999999999999996 332222222
Q ss_pred ccccCCCCC
Q psy1364 164 MMEGMDPFS 172 (401)
Q Consensus 164 ~~~~~~~f~ 172 (401)
+++++|||.
T Consensus 448 ~~a~~dp~~ 456 (486)
T KOG0550|consen 448 GGAGFDPFN 456 (486)
T ss_pred CCcCcChhh
Confidence 335677774
No 52
>KOG0722|consensus
Probab=99.51 E-value=1.5e-14 Score=131.67 Aligned_cols=68 Identities=40% Similarity=0.731 Sum_probs=63.4
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccc
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCG 155 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g 155 (401)
...|.|+||||+++|+..||.+|||+||++||||++++ +++.+.|..|.+||++|.|.+.|+.||-.-
T Consensus 31 G~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 31 GAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred cchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 46899999999999999999999999999999999987 667799999999999999999999999643
No 53
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.51 E-value=4.4e-14 Score=134.58 Aligned_cols=121 Identities=25% Similarity=0.324 Sum_probs=91.6
Q ss_pred eeehhhcccchhhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcCCcccccccCCCCCCCCCCCCCCccCcccccCC
Q psy1364 18 ILTIFRKNYLHKRSVMTLLRRFYSFLKYFVFVIMAVVFIVLLLEHFTDPPKVKRTHRGFNPYPPRPKASKERDLYEVLGV 97 (401)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~iLgv 97 (401)
+|....++-.....+..+|++++..|+++...+..+..++.....+..... ...+. . ........++|++|||
T Consensus 136 l~~vA~ADG~l~~~E~~~L~~Ia~~Lgis~~df~~~~~~~~~~~~f~~~~~----~~~~~-~--~~~~~~~~~ay~vLgv 208 (267)
T PRK09430 136 QIQAAFADGSLHPNERQVLYVIAEELGFSRFQFDQLLRMMQAGFRFQQQQG----GGGYQ-Q--AQRGPTLEDAYKVLGV 208 (267)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccccc----ccccc-c--ccCCCcHHhHHHHcCC
Confidence 344455555566788999999999999999999999888776555521100 00111 0 1123556899999999
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCc-------hHHHHHHHHHhHhhhhcchh
Q psy1364 98 PRNADSNKIKSAYRALAKKMHPDKNPND-------DQAQAKFQELGAAYEILSDE 145 (401)
Q Consensus 98 ~~~as~~eIk~ayr~l~~~~HPDk~~~~-------~~a~~~f~~i~~Ay~~L~d~ 145 (401)
++++|.+|||+|||+|+++||||++.+. +.|+++|++|++||++|+..
T Consensus 209 ~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 209 SESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred CCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999997431 35889999999999999854
No 54
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.49 E-value=3.8e-14 Score=138.24 Aligned_cols=130 Identities=26% Similarity=0.444 Sum_probs=96.3
Q ss_pred cCccceeEeeeehhhcccchhhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcCCcccccccCCCCCCCCCCCCCCc
Q psy1364 9 SFSSSLFYCILTIFRKNYLHKRSVMTLLRRFYSFLKYFVFVIMAVVFIVLLLEHFTDPPKVKRTHRGFNPYPPRPKASKE 88 (401)
Q Consensus 9 ~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (401)
++.-+-.-|.|+-|+..-++ .+..+ +++. ...+++++|+++.++...+.+ +.+. ..+.
T Consensus 40 SKe~~~vr~~~q~~Rpkdkn-v~rKS----If~l--R~If~ivgWl~i~~L~~~I~~---~k~~------------~~~~ 97 (610)
T COG5407 40 SKELRRVRCACQGCRPKDKN-VSRKS----IFKL--RKIFTIVGWLVISYLISNIRT---LKIE------------YRRG 97 (610)
T ss_pred cchhhcchhhhhhcCccccc-hhhhH----HHhh--hHHHHHHHHHHHHHHHHHHHH---HHHH------------HHcC
Confidence 34445566888888854444 11111 2221 334578888888888877632 1111 1234
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC---c--hHHHHHHHHHhHhhhhcchhhhhhhccccchhhhh
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPN---D--DQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVK 160 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~--~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 160 (401)
.|+|+||||+.++|..+||++||+|+.||||||.+. + .+.+|++.+|++||+.|+|...|++|-.||.....
T Consensus 98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p 174 (610)
T COG5407 98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP 174 (610)
T ss_pred CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence 577899999999999999999999999999999876 2 46889999999999999999999999999986544
No 55
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.45 E-value=9.7e-14 Score=123.59 Aligned_cols=65 Identities=29% Similarity=0.521 Sum_probs=57.8
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCch-----HHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 89 RDLYEVLGVPRN--ADSNKIKSAYRALAKKMHPDKNPNDD-----QAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 89 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
.|||++|||++. ++..+|+++||+|++++|||+..+.+ .|.+.|..||+||++|+||.+|+.|+-
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999996 68899999999999999999976542 256789999999999999999999984
No 56
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.44 E-value=1.4e-13 Score=121.91 Aligned_cols=65 Identities=32% Similarity=0.510 Sum_probs=57.4
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCch---HHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 89 RDLYEVLGVPRN--ADSNKIKSAYRALAKKMHPDKNPNDD---QAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 89 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
.|||++|||++. ++..+|+++||+|++++|||++.+.. .+.+.+..||+||++|+||.+|+.|+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL 71 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML 71 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 589999999997 78999999999999999999987532 234568899999999999999999975
No 57
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.41 E-value=3e-13 Score=120.31 Aligned_cols=67 Identities=24% Similarity=0.439 Sum_probs=59.9
Q ss_pred CccCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCch-----HHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 87 KERDLYEVLGVPRN--ADSNKIKSAYRALAKKMHPDKNPNDD-----QAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 87 ~~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
...|||++||+++. .+..+|+++||+|++++|||++...+ .+.+.|..||+||++|+||.+|+.|+-
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 56899999999997 67899999999999999999986643 256789999999999999999999995
No 58
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.40 E-value=4.3e-13 Score=119.77 Aligned_cols=66 Identities=29% Similarity=0.511 Sum_probs=57.9
Q ss_pred ccCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCchH-----HHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 88 ERDLYEVLGVPRN--ADSNKIKSAYRALAKKMHPDKNPNDDQ-----AQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 88 ~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
..|||++|||++. ++..+|+++||+|++++|||+++..+. +.+.+..||+||++|+||.+|+.|+-
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 4799999999995 689999999999999999999876543 34456899999999999999999984
No 59
>KOG0720|consensus
Probab=99.38 E-value=3.7e-13 Score=132.25 Aligned_cols=67 Identities=36% Similarity=0.613 Sum_probs=63.9
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhcccc
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQC 154 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 154 (401)
+..|+|.+|||+.++|+++|||.|||+|...|||||.. +.|+|.|+.++.|||+|+|+++|..||.-
T Consensus 233 ~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~-~~A~Eafk~Lq~Afevig~~~kR~eYd~e 299 (490)
T KOG0720|consen 233 NILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI-PRAEEAFKKLQVAFEVIGDSVKRKEYDLE 299 (490)
T ss_pred cCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC-hhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence 47899999999999999999999999999999999984 88999999999999999999999999974
No 60
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.37 E-value=5.3e-13 Score=109.77 Aligned_cols=55 Identities=20% Similarity=0.380 Sum_probs=49.2
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcc
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILS 143 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~ 143 (401)
.+...++|+||||+++||.+||+++||+|++++|||++.+ .+.|++|++||++|.
T Consensus 61 ~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs----~~~~~kIneAyevL~ 115 (116)
T PTZ00100 61 PMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS----TYIASKVNEAKDLLL 115 (116)
T ss_pred CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHh
Confidence 4556899999999999999999999999999999999643 467899999999985
No 61
>PHA02624 large T antigen; Provisional
Probab=99.23 E-value=6.5e-12 Score=129.41 Aligned_cols=60 Identities=30% Similarity=0.551 Sum_probs=56.3
Q ss_pred ccCcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhc
Q psy1364 88 ERDLYEVLGVPRNA--DSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRY 151 (401)
Q Consensus 88 ~~~~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~y 151 (401)
.+++|++|||+++| +.+|||+|||++|++||||++++ +++|++|++||++|+|+.+|..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhc
Confidence 46899999999999 99999999999999999999754 57899999999999999999999
No 62
>KOG1150|consensus
Probab=98.99 E-value=4.7e-10 Score=99.09 Aligned_cols=66 Identities=36% Similarity=0.631 Sum_probs=60.2
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-DQAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
+.|+|+||.|+++.+.++||+.||+|++..|||||+++ +.|...|.-+.+||..|-|+..|..-+.
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~~ 118 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCLD 118 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 56899999999999999999999999999999999998 6788999999999999999986665544
No 63
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.97 E-value=1e-09 Score=97.79 Aligned_cols=65 Identities=28% Similarity=0.395 Sum_probs=57.3
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCch-----HHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 89 RDLYEVLGVPRN--ADSNKIKSAYRALAKKMHPDKNPNDD-----QAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 89 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
.|||++||+++. .+..++++.||+|.+++|||+..... .+.+.-..||+||.+|+||-+|+.|=-
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 589999999996 89999999999999999999986542 255678899999999999999999954
No 64
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.96 E-value=2.1e-09 Score=104.10 Aligned_cols=70 Identities=23% Similarity=0.360 Sum_probs=63.4
Q ss_pred ccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCC
Q psy1364 315 FERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPK 392 (401)
Q Consensus 315 f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~ 392 (401)
+.|+|.|+++++.|||.||++|+++.| +++|++++|.||+++++|++++++|+|++. |||||+|+|.-+.
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~ 194 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHP 194 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCC
Confidence 357899999999999999999999998 678888999999999999999999999862 9999999998443
No 65
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.92 E-value=1.4e-09 Score=95.68 Aligned_cols=54 Identities=28% Similarity=0.406 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCCCc-----hHHHHHHHHHhHhhhhcchhhhhhhcccc
Q psy1364 101 ADSNKIKSAYRALAKKMHPDKNPND-----DQAQAKFQELGAAYEILSDEKKRQRYDQC 154 (401)
Q Consensus 101 as~~eIk~ayr~l~~~~HPDk~~~~-----~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 154 (401)
.+..+|+++||+|++++|||+.+.. ..+.+.|..||+||++|+||.+|+.|+--
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~ 61 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS 61 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 4788999999999999999996543 23678899999999999999999999863
No 66
>PRK14282 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=6.5e-09 Score=103.98 Aligned_cols=87 Identities=22% Similarity=0.327 Sum_probs=74.5
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||+||+.|.++.|.. ...++
T Consensus 272 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~-----------------------------------------------ldG~~ 304 (369)
T PRK14282 272 KRSGSDLIYDVTIDYLQAILGTTVEVPL-----------------------------------------------PEGGT 304 (369)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEeC-----------------------------------------------CCCcE
Confidence 3579999999999999999999877652 12346
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEE
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTN 325 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~ 325 (401)
++|.||+|+.+|++++++|+|.+..+ +.+|||||+|++..|+.|.+++.+|+.+
T Consensus 305 i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 305 TMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE 359 (369)
T ss_pred EEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 89999999999999999999998654 5689999999999999999999887654
No 67
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.77 E-value=2.8e-08 Score=97.00 Aligned_cols=75 Identities=27% Similarity=0.477 Sum_probs=63.0
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEE----ecCC--C-------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEE
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDI----DQLD--G-------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLY 383 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i----~tld--G-------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~ 383 (401)
++|.|+++++.|+|.||+.|+..+| ++.+ | .+++|.||+++++|++++++|+|+|... ++.+||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDl~ 193 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGEN-GGPNGDLW 193 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCC-CCCCccEE
Confidence 4689999999999999999996544 4444 3 4689999999999999999999999643 34689999
Q ss_pred EEEEEECCCC
Q psy1364 384 ITFDVEFPKN 393 (401)
Q Consensus 384 i~~~v~~P~~ 393 (401)
|+|+|. |..
T Consensus 194 v~i~v~-ph~ 202 (306)
T PRK10266 194 LVIHIA-PHP 202 (306)
T ss_pred EEEEEc-CCC
Confidence 999999 765
No 68
>PRK14290 chaperone protein DnaJ; Provisional
Probab=98.68 E-value=3.9e-08 Score=98.29 Aligned_cols=87 Identities=20% Similarity=0.368 Sum_probs=74.7
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||.||+.|.++.|.. -..+
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~I~~------------------------------------------------~~g~ 297 (365)
T PRK14290 266 QRINDDLYVDQKINFPQAALGGEIEIKL------------------------------------------------FREK 297 (365)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEEc------------------------------------------------CCce
Confidence 3568999999999999999999877652 1124
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCCC-CCccEEEEEEEeCCCCccccCCCcEEEE
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHIDG-EPGDLIFHIRTLPHPRFERRGDDLYTNI 326 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~g-~~GDL~v~i~v~~h~~f~r~g~Dl~~~~ 326 (401)
++|.||+|+++|++++++|+|.+.+++ .+|||||+|+|..++.|++++.+|+.++
T Consensus 298 i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 298 YNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF 353 (365)
T ss_pred EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 899999999999999999999987664 6899999999999999999998887653
No 69
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=98.67 E-value=4.5e-08 Score=76.45 Aligned_cols=72 Identities=21% Similarity=0.409 Sum_probs=54.8
Q ss_pred ceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEEEEEE
Q psy1364 197 NIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVEI 276 (401)
Q Consensus 197 di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~I 276 (401)
|+.+++.|+|.||+.|+++++.- ...+.++|.|
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~-----------------------------------------------l~g~~~~i~i 33 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPT-----------------------------------------------LDGKTIKIKI 33 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE------------------------------------------------TTS-EEEEEE
T ss_pred CeEEEEEeCHHHHhCCCEEEEEC-----------------------------------------------CCCCEEEEec
Confidence 67889999999999999977741 1236789999
Q ss_pred cccccCCCEEeeCCCCCCCCCC--CCccEEEEEEEeCCCCc
Q psy1364 277 EMGMKDGQQTKFTAEGEPHIDG--EPGDLIFHIRTLPHPRF 315 (401)
Q Consensus 277 p~Gv~~G~~i~~~g~G~~~~~g--~~GDL~v~i~v~~h~~f 315 (401)
|+|+++|+.++++|+|.+...+ ..|||+|+++|.-...+
T Consensus 34 p~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~l 74 (81)
T PF01556_consen 34 PPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKL 74 (81)
T ss_dssp TST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SST
T ss_pred cCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCC
Confidence 9999999999999999975543 69999999999844433
No 70
>PRK14285 chaperone protein DnaJ; Provisional
Probab=98.65 E-value=5.1e-08 Score=97.32 Aligned_cols=85 Identities=16% Similarity=0.302 Sum_probs=71.8
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||.||+.|.++.|.. ...++
T Consensus 262 ~R~G~dL~~~~~Isl~eAl~G~~~~i~t-----------------------------------------------ldG~~ 294 (365)
T PRK14285 262 KRNGKDLYATLPISFTQAALGKEIKIQT-----------------------------------------------IASKK 294 (365)
T ss_pred EEeccceEEEEecCHHHHhCCCEEEEEC-----------------------------------------------CCCCE
Confidence 3578999999999999999999877652 12346
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCCC-CCccEEEEEEEeCCCCccccCCCcE
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHIDG-EPGDLIFHIRTLPHPRFERRGDDLY 323 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~g-~~GDL~v~i~v~~h~~f~r~g~Dl~ 323 (401)
++|.||+|+.+|++++++|+|.+.++. ..|||||+|++..|+.|.+++..++
T Consensus 295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l 347 (365)
T PRK14285 295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLL 347 (365)
T ss_pred EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 899999999999999999999987664 4699999999999999988765544
No 71
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.61 E-value=2.3e-08 Score=92.44 Aligned_cols=71 Identities=34% Similarity=0.479 Sum_probs=61.2
Q ss_pred CCCCccCcccccCCCC---CCCHHHHHHHHHHHHHhhCCCCCCC--chHHHHHHHHHhHhhhhcchhhhhhhcccc
Q psy1364 84 KASKERDLYEVLGVPR---NADSNKIKSAYRALAKKMHPDKNPN--DDQAQAKFQELGAAYEILSDEKKRQRYDQC 154 (401)
Q Consensus 84 ~~~~~~~~y~iLgv~~---~as~~eIk~ayr~l~~~~HPDk~~~--~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 154 (401)
..++..|+|.+||++. -|+..+|.+|.++.+.+||||+... +....+.|+.|+.||++|+|+.+|..||.-
T Consensus 38 k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~ 113 (379)
T COG5269 38 KNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN 113 (379)
T ss_pred hhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence 4566789999999987 6788999999999999999999721 234567799999999999999999999974
No 72
>PRK14294 chaperone protein DnaJ; Provisional
Probab=98.60 E-value=7.7e-08 Score=96.19 Aligned_cols=86 Identities=22% Similarity=0.410 Sum_probs=72.4
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||.||+.|.++.|.- ... .
T Consensus 260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~t-----------------------------------------------ldG-~ 291 (366)
T PRK14294 260 ERDGNDVHCKVPISFVQAALGAQIEVPT-----------------------------------------------LEG-E 291 (366)
T ss_pred eecCCCEEEEEEeCHHHHhCCCeEEEEC-----------------------------------------------CCC-c
Confidence 3679999999999999999999876641 012 2
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEE
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTN 325 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~ 325 (401)
++|.||+|+.+|++++++|+|.+.++ +.+|||||+|+|..++.|.++..+++..
T Consensus 292 ~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~ 346 (366)
T PRK14294 292 RELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTE 346 (366)
T ss_pred EEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 59999999999999999999998765 3689999999999999999888776654
No 73
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.58 E-value=2e-07 Score=93.81 Aligned_cols=79 Identities=20% Similarity=0.287 Sum_probs=65.2
Q ss_pred cCCCcEEEEEecHHHHcCCCEEEEecC-----------------------------------------------------
Q psy1364 318 RGDDLYTNITISLQDALTGFKFDIDQL----------------------------------------------------- 344 (401)
Q Consensus 318 ~g~Dl~~~~~I~l~eAl~G~~~~i~tl----------------------------------------------------- 344 (401)
+|.|+.+.+.|||.|++.|++.+|...
T Consensus 126 ~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G 205 (386)
T PRK14289 126 RGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNG 205 (386)
T ss_pred CCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCc
Confidence 588999999999999999998766432
Q ss_pred -------------------CCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChh
Q psy1364 345 -------------------DGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEE 398 (401)
Q Consensus 345 -------------------dG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~ 398 (401)
+.+.++|.||+++++|++++|+|+|+|... ++.+|||||+|+|..|+. ++.+
T Consensus 206 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~~GDL~v~v~v~~~~~-f~r~ 276 (386)
T PRK14289 206 EGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKH-GGVNGDLLVVIEEEPHPE-LIRD 276 (386)
T ss_pred cccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCC-CCCCccEEEEEEEecCCc-cccc
Confidence 012578999999999999999999998643 345799999999999985 6654
No 74
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.57 E-value=1.2e-07 Score=95.61 Aligned_cols=87 Identities=20% Similarity=0.310 Sum_probs=70.9
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||+||+.|++++|.- ..+...
T Consensus 274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~t----------------------------------------------ld~g~~ 307 (391)
T PRK14284 274 ERRGDDLILELPIGFVDAALGMKKEIPT----------------------------------------------LLKEGT 307 (391)
T ss_pred eeecCCEEEEEEecHHHHhCCCeEEEee----------------------------------------------cCCCcE
Confidence 3568999999999999999999877741 011246
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEE
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYT 324 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~ 324 (401)
++|.||+|+.+|++++++|+|.+..+ +.+|||||+|+|..++.+..+..+++.
T Consensus 308 i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~ 361 (391)
T PRK14284 308 CRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLR 361 (391)
T ss_pred EEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Confidence 89999999999999999999998765 468999999999988877766554443
No 75
>PRK10767 chaperone protein DnaJ; Provisional
Probab=98.54 E-value=1.5e-07 Score=94.27 Aligned_cols=87 Identities=16% Similarity=0.326 Sum_probs=73.5
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|+|.+|+.|+++.|.- ... .
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~-----------------------------------------------ldG-~ 289 (371)
T PRK10767 258 ERDGNDLYCEVPISFTTAALGGEIEVPT-----------------------------------------------LDG-R 289 (371)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEec-----------------------------------------------CCC-c
Confidence 3578999999999999999999877641 011 4
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEE
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNI 326 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~ 326 (401)
++|.||+|+.+|++++++|+|.+..+ +..|||||+++|..++.+.+++.+|+.++
T Consensus 290 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 290 VKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 79999999999999999999998654 46799999999999999999988876654
No 76
>PRK14298 chaperone protein DnaJ; Provisional
Probab=98.52 E-value=1.6e-07 Score=94.08 Aligned_cols=86 Identities=13% Similarity=0.243 Sum_probs=72.3
Q ss_pred ccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEE
Q psy1364 193 ARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHL 272 (401)
Q Consensus 193 ~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l 272 (401)
+.|.|+.+++.|||.||+.|.++.|.- ... .+
T Consensus 262 R~G~DL~~~~~Isl~eAl~G~~~~i~t-----------------------------------------------ldG-~i 293 (377)
T PRK14298 262 RVGDDIISEIPISFTQAALGADIMVPT-----------------------------------------------LYG-KV 293 (377)
T ss_pred EEcCcEEEEEEeCHHHHhCCCeEEEec-----------------------------------------------CCC-CE
Confidence 579999999999999999999876641 012 26
Q ss_pred EEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcEEEE
Q psy1364 273 EVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLYTNI 326 (401)
Q Consensus 273 ~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~ 326 (401)
+|.||+|+.+|++++++|+|.+..+ +..|||||+++|..++.+.+++.+++.++
T Consensus 294 ~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 294 KMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred EEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 8999999999999999999998655 35799999999999999998887776553
No 77
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.51 E-value=3.6e-07 Score=91.56 Aligned_cols=80 Identities=23% Similarity=0.371 Sum_probs=67.1
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.++|.|+.+++.|||.+|+.|.++.|.. ...+.
T Consensus 261 ~R~G~Dl~~~~~Isl~~Al~G~~~~i~~-----------------------------------------------ldg~~ 293 (372)
T PRK14300 261 KVDGANLHCKLPISFVNAALGGEIEVPV-----------------------------------------------IEGGK 293 (372)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEec-----------------------------------------------CCCCE
Confidence 3568999999999999999999877652 12246
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCcccc
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERR 318 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~ 318 (401)
++|.||+|+++|++++++|+|.+.++ ..+|||||+++|..+..+.-+
T Consensus 294 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~ 341 (372)
T PRK14300 294 VNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKR 341 (372)
T ss_pred EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHH
Confidence 89999999999999999999998765 468999999999988765543
No 78
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.51 E-value=5.3e-07 Score=90.37 Aligned_cols=76 Identities=30% Similarity=0.442 Sum_probs=63.7
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC----------------------------------------------------
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL---------------------------------------------------- 344 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl---------------------------------------------------- 344 (401)
++|.|+.+.+.|||.||+.|++++|...
T Consensus 115 ~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~ 194 (373)
T PRK14301 115 QAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGR 194 (373)
T ss_pred CCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceee
Confidence 4689999999999999999999877541
Q ss_pred ---------CC-------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCC
Q psy1364 345 ---------DG-------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 345 ---------dG-------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~ 393 (401)
+| ++++|.||+++++|++++++|+|+|... ++..|||||+|+|.-|+.
T Consensus 195 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDLiv~i~v~~h~~ 258 (373)
T PRK14301 195 VITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVH-GGPPGDLYVVITVEDDKI 258 (373)
T ss_pred ecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCCC-CCCCcCEEEEEEEEECCC
Confidence 11 3688999999999999999999998653 345799999999997764
No 79
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.49 E-value=8.1e-07 Score=89.12 Aligned_cols=81 Identities=23% Similarity=0.375 Sum_probs=65.9
Q ss_pred cCCCcEEEEEecHHHHcCCCEEEEecC--------CC-------------------------------------------
Q psy1364 318 RGDDLYTNITISLQDALTGFKFDIDQL--------DG------------------------------------------- 346 (401)
Q Consensus 318 ~g~Dl~~~~~I~l~eAl~G~~~~i~tl--------dG------------------------------------------- 346 (401)
+|.|+...+.|||.|++.|++++|... +|
T Consensus 115 kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G 194 (374)
T PRK14293 115 RGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNG 194 (374)
T ss_pred CCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCc
Confidence 588999999999999999998766431 01
Q ss_pred ---------------------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhh
Q psy1364 347 ---------------------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEK 400 (401)
Q Consensus 347 ---------------------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk 400 (401)
..++|.||+++++|++++|+|+|+|... .+.+|||||+|+|..|+. ++.++.
T Consensus 195 ~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~-~~~~GDL~v~v~v~~~~~-f~r~g~ 267 (374)
T PRK14293 195 TGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLR-GGPPGDLYVYLFVKNDPE-FRRDGI 267 (374)
T ss_pred ceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCC-CCCCcCEEEEEEEeCCCc-cChhhh
Confidence 2467899999999999999999998643 235799999999999986 776653
No 80
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.46 E-value=3.5e-07 Score=91.17 Aligned_cols=83 Identities=18% Similarity=0.420 Sum_probs=69.0
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.++|.|+.+++.|||+||+.|.++.|.- ... .
T Consensus 263 ~r~g~DL~~~~~isl~eAl~G~~~~i~~-----------------------------------------------ldG-~ 294 (354)
T TIGR02349 263 ERDGNDLYIEVPISFTQAILGGEIEVPT-----------------------------------------------LDG-D 294 (354)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEec-----------------------------------------------CCc-e
Confidence 3578999999999999999999876641 011 5
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCCC-CCccEEEEEEEeCCCCccccCCCc
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHIDG-EPGDLIFHIRTLPHPRFERRGDDL 322 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~g-~~GDL~v~i~v~~h~~f~r~g~Dl 322 (401)
++|.||+|+.+|++++++|+|.+.+++ .+|||||+++|..++.+..+..++
T Consensus 295 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~ 346 (354)
T TIGR02349 295 VKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKEL 346 (354)
T ss_pred EEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 899999999999999999999987654 689999999999888877665443
No 81
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.46 E-value=5.1e-07 Score=90.94 Aligned_cols=76 Identities=22% Similarity=0.314 Sum_probs=64.0
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||.+|+.|.+++|.- ...+.
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~I~t-----------------------------------------------ldG~~ 314 (389)
T PRK14295 282 GRSGDNLTVTVPVTFPEAALGAEVRVPT-----------------------------------------------LGGPP 314 (389)
T ss_pred EEecCCEEEEEeecHHHHhCCCeEEEEC-----------------------------------------------CCCCE
Confidence 3679999999999999999999877641 12346
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCCCCCccEEEEEEEeCCCC
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHIDGEPGDLIFHIRTLPHPR 314 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~g~~GDL~v~i~v~~h~~ 314 (401)
++|.||+|+++|++++++|+|.+..++.+|||||+++|.-...
T Consensus 315 ~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~~v~~P~~ 357 (389)
T PRK14295 315 VTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTVEVAVPKD 357 (389)
T ss_pred EEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEEEEECCCC
Confidence 8999999999999999999999876667899999999985543
No 82
>PRK14287 chaperone protein DnaJ; Provisional
Probab=98.44 E-value=5.8e-07 Score=89.97 Aligned_cols=84 Identities=18% Similarity=0.379 Sum_probs=69.0
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||.||+.|.++.|.. ... .
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~-----------------------------------------------ldg-~ 289 (371)
T PRK14287 258 ERDGDDIYCEMPLTFPQVALGDEIEVPT-----------------------------------------------LNG-K 289 (371)
T ss_pred EEecCCeEEEEeccHHHHhCCCEEEEEc-----------------------------------------------CCC-C
Confidence 3678999999999999999999877641 012 3
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCccccCCCcE
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERRGDDLY 323 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~g~Dl~ 323 (401)
++|.||+|+.+|++++++|+|.+..+ +..|||||+|+|..++.+.++...++
T Consensus 290 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14287 290 VKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELM 342 (371)
T ss_pred EEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHH
Confidence 79999999999999999999998655 45799999999999988876654443
No 83
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.43 E-value=8e-07 Score=89.62 Aligned_cols=76 Identities=22% Similarity=0.437 Sum_probs=63.7
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.++|.|+.+++.|||.||+.|.++.|.. ... .
T Consensus 289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~-----------------------------------------------ldg-~ 320 (392)
T PRK14279 289 GRDGDDLTVTVPVSFTELALGSTLSVPT-----------------------------------------------LDG-P 320 (392)
T ss_pred eeecCcEEEEEEccHHHHcCCceEEEEc-----------------------------------------------CCc-e
Confidence 3679999999999999999999876641 012 3
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCCCCCccEEEEEEEeCCCCc
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHIDGEPGDLIFHIRTLPHPRF 315 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~g~~GDL~v~i~v~~h~~f 315 (401)
++|.||+|+++|++|+++|+|.+..++.+|||||+++|.-....
T Consensus 321 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~~~v~~P~~L 364 (392)
T PRK14279 321 VGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPPNL 364 (392)
T ss_pred EEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCC
Confidence 79999999999999999999998766678999999999866543
No 84
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.43 E-value=6.5e-07 Score=90.01 Aligned_cols=75 Identities=25% Similarity=0.411 Sum_probs=62.9
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||+||+.|+++.|.. ...+.
T Consensus 271 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~-----------------------------------------------ldG~~ 303 (382)
T PRK14291 271 ERRGDNLYLDVNITVAEAVLGTELEVPL-----------------------------------------------LDGKK 303 (382)
T ss_pred eeecCCeEEEEEeeHHHHhCCCEEEEec-----------------------------------------------CCCCE
Confidence 3568999999999999999999887752 02346
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCC
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHP 313 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~ 313 (401)
++|.||+|+++|++|+++|+|.+.++ ..+|||||+++|.-..
T Consensus 304 l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P~ 346 (382)
T PRK14291 304 EKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPK 346 (382)
T ss_pred EEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence 89999999999999999999998765 4689999999998443
No 85
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.41 E-value=9.6e-07 Score=88.46 Aligned_cols=75 Identities=28% Similarity=0.493 Sum_probs=62.5
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC--------CC------------------------------------------
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL--------DG------------------------------------------ 346 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl--------dG------------------------------------------ 346 (401)
++|.|+.+.+.|||.||+.|++++|... +|
T Consensus 121 ~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~ 200 (372)
T PRK14286 121 QRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGT 200 (372)
T ss_pred CCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceee
Confidence 4689999999999999999999777542 01
Q ss_pred ------------------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCC
Q psy1364 347 ------------------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 347 ------------------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~ 393 (401)
++++|.||+++++|++++++|+|+|...+ +.+|||||+|+|. |..
T Consensus 201 ~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDL~i~i~v~-~h~ 263 (372)
T PRK14286 201 VISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNG-GPHGDLYVVTHIK-KHE 263 (372)
T ss_pred EecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCccccCCCC-CCCceEEEEEEEc-cCC
Confidence 36889999999999999999999997543 4579999999998 543
No 86
>PRK14288 chaperone protein DnaJ; Provisional
Probab=98.41 E-value=8.5e-07 Score=88.77 Aligned_cols=81 Identities=21% Similarity=0.324 Sum_probs=67.5
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||.||+.|.++.|.- ...+.
T Consensus 254 ~R~G~DL~~~~~Isl~eAllG~~i~v~t-----------------------------------------------LdG~~ 286 (369)
T PRK14288 254 KREGCDLFIEAPVFFTTIALGHTIKVPS-----------------------------------------------LKGDE 286 (369)
T ss_pred EEeCCEEEEEEecCHHHHhcCCEEEeec-----------------------------------------------CCCCE
Confidence 3679999999999999999999876641 12346
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCCC-CCccEEEEEEEeCCCCccccC
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHIDG-EPGDLIFHIRTLPHPRFERRG 319 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~g-~~GDL~v~i~v~~h~~f~r~g 319 (401)
++|.||+|+.+|+.++++|+|.+.++. ..|||||+++|..++.+..+.
T Consensus 287 l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q 335 (369)
T PRK14288 287 LELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQ 335 (369)
T ss_pred EEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence 899999999999999999999987664 469999999999888766543
No 87
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.36 E-value=1.8e-06 Score=86.83 Aligned_cols=76 Identities=30% Similarity=0.466 Sum_probs=62.9
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC--------C-------------------------------------------
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL--------D------------------------------------------- 345 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl--------d------------------------------------------- 345 (401)
++|.|+..++.|||.|++.|++++|... .
T Consensus 117 ~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~ 196 (378)
T PRK14283 117 QRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQ 196 (378)
T ss_pred cCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCC
Confidence 4689999999999999999998766431 1
Q ss_pred ---------------------CcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCC
Q psy1364 346 ---------------------GRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 346 ---------------------G~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~ 393 (401)
..+++|.||+++++|++++++|+|+|... .+.+|||||+|+|.-+..
T Consensus 197 G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~-~~~~GDLiv~i~v~~~~~ 264 (378)
T PRK14283 197 GEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDR-GGEPGDLYVVIKVKPHKI 264 (378)
T ss_pred ccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCC-CCCCccEEEEEEEEcCCC
Confidence 13577899999999999999999999764 356899999999986653
No 88
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.35 E-value=1.8e-06 Score=86.80 Aligned_cols=76 Identities=26% Similarity=0.370 Sum_probs=62.2
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC----------------------------------------------------
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL---------------------------------------------------- 344 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl---------------------------------------------------- 344 (401)
++|.|+.+.+.|||.||+.|++++|...
T Consensus 119 ~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~ 198 (380)
T PRK14297 119 QRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCG 198 (380)
T ss_pred CCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCC
Confidence 4589999999999999999998776441
Q ss_pred --------------------CCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCC
Q psy1364 345 --------------------DGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 345 --------------------dG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~ 393 (401)
..++++|.||+++++|++++++|+|.+... ....|||||+++|..++.
T Consensus 199 G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~-~~~~GDL~v~v~v~~h~~ 266 (380)
T PRK14297 199 GSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKN-GGPTGDLYINIRVAPHKT 266 (380)
T ss_pred CCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCC-CCCCccEEEEEEEcCCCC
Confidence 113578899999999999999999998542 235799999999997653
No 89
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.34 E-value=1.6e-06 Score=86.94 Aligned_cols=75 Identities=32% Similarity=0.538 Sum_probs=61.8
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC--------CC------------------------------------------
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL--------DG------------------------------------------ 346 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl--------dG------------------------------------------ 346 (401)
++|.|+.+.+.|||.|++.|++++|... +|
T Consensus 114 ~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~ 193 (376)
T PRK14280 114 RQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCN 193 (376)
T ss_pred ccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCC
Confidence 4689999999999999999998776441 00
Q ss_pred ----------------------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCC
Q psy1364 347 ----------------------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 347 ----------------------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~ 393 (401)
++++|.||+++++|++++++|+|+|...+ +.+|||||+|+|. |..
T Consensus 194 G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~-~~~GDL~v~i~v~-~h~ 260 (376)
T PRK14280 194 GTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNG-GPAGDLYVVFRVR-PHE 260 (376)
T ss_pred CCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCCCC-CCCcCEEEEEEEe-cCC
Confidence 35788999999999999999999996533 4679999999998 543
No 90
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.34 E-value=1.8e-06 Score=86.94 Aligned_cols=74 Identities=28% Similarity=0.486 Sum_probs=61.1
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC--------CC------------------------------------------
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL--------DG------------------------------------------ 346 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl--------dG------------------------------------------ 346 (401)
++|.|+...+.|||.|++.|++++|... +|
T Consensus 126 ~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~ 205 (386)
T PRK14277 126 QKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCH 205 (386)
T ss_pred CCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCC
Confidence 3589999999999999999998777541 11
Q ss_pred ----------------------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCC
Q psy1364 347 ----------------------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPK 392 (401)
Q Consensus 347 ----------------------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~ 392 (401)
+.++|.||+++++|++++++|+|+|... ++.+|||||+|+|. |.
T Consensus 206 G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDL~v~i~v~-~h 271 (386)
T PRK14277 206 GEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIK-GGPNGDLYIVIKVK-PH 271 (386)
T ss_pred cceeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCC-CCCCccEEEEEEEe-cC
Confidence 3578899999999999999999998643 34579999999998 54
No 91
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.33 E-value=2.2e-06 Score=86.17 Aligned_cols=73 Identities=26% Similarity=0.476 Sum_probs=60.9
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC----------------------------------------------------
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL---------------------------------------------------- 344 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl---------------------------------------------------- 344 (401)
++|.|+.+.+.|||.|++.|++++|...
T Consensus 117 ~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~ 196 (380)
T PRK14276 117 RQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCH 196 (380)
T ss_pred CCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCC
Confidence 4689999999999999999998766431
Q ss_pred -------------CC-------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEEC
Q psy1364 345 -------------DG-------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEF 390 (401)
Q Consensus 345 -------------dG-------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~ 390 (401)
.| ++++|.||+++++|++++++|+|+|...+ +.+|||||+|+|.-
T Consensus 197 G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~-~~~GDL~v~i~v~~ 261 (380)
T PRK14276 197 GTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNG-GPYGDLYVVFRVEP 261 (380)
T ss_pred CCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEeccccCCCCC-CCCcCEEEEEEEEE
Confidence 11 35788999999999999999999997543 46799999999984
No 92
>KOG1789|consensus
Probab=98.32 E-value=5.5e-07 Score=96.22 Aligned_cols=58 Identities=36% Similarity=0.550 Sum_probs=49.2
Q ss_pred CCCCccCcccccCCCCCC----CHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcch
Q psy1364 84 KASKERDLYEVLGVPRNA----DSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSD 144 (401)
Q Consensus 84 ~~~~~~~~y~iLgv~~~a----s~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d 144 (401)
..+...+.|+||.|+-+- ..+.||++|+|||.+||||||| +..++|..+|+|||.|..
T Consensus 1276 ~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1276 ATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLSS 1337 (2235)
T ss_pred CccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHHH
Confidence 355678899999997632 3478999999999999999995 467899999999999983
No 93
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.32 E-value=2e-06 Score=86.22 Aligned_cols=75 Identities=24% Similarity=0.371 Sum_probs=61.5
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC----------------------------------------------------
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL---------------------------------------------------- 344 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl---------------------------------------------------- 344 (401)
++|.|+.+.+.|||.||+.|++++|...
T Consensus 120 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~ 199 (372)
T PRK14296 120 TKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCN 199 (372)
T ss_pred CCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcC
Confidence 4689999999999999999998776441
Q ss_pred -------------CC-------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCC
Q psy1364 345 -------------DG-------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 345 -------------dG-------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~ 393 (401)
.| +.++|.||+++++|++++++|+|.+...+ +..|||||+|+|. |..
T Consensus 200 G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDL~v~v~v~-~h~ 266 (372)
T PRK14296 200 GAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNN-GVNGDLIIDIYLK-ESK 266 (372)
T ss_pred CcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCC-CCCccEEEEEEEe-CCC
Confidence 11 35789999999999999999999986432 4579999999998 543
No 94
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.31 E-value=2.7e-06 Score=85.28 Aligned_cols=76 Identities=28% Similarity=0.377 Sum_probs=62.4
Q ss_pred cCCCcEEEEEecHHHHcCCCEEEEecC-----------------------------------------------------
Q psy1364 318 RGDDLYTNITISLQDALTGFKFDIDQL----------------------------------------------------- 344 (401)
Q Consensus 318 ~g~Dl~~~~~I~l~eAl~G~~~~i~tl----------------------------------------------------- 344 (401)
+|.|+...+.|||.||+.|++++|.+.
T Consensus 111 ~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~ 190 (371)
T PRK14292 111 RGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCR 190 (371)
T ss_pred CCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCc
Confidence 588999999999999999998766542
Q ss_pred --------------------CCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCCh
Q psy1364 345 --------------------DGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSE 397 (401)
Q Consensus 345 --------------------dG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~ 397 (401)
+...++|.||+|+++|++++++|+|.+... ..|||||+|+|..++. ++.
T Consensus 191 G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~---~~GDL~v~i~v~~h~~-f~r 259 (371)
T PRK14292 191 GEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPG---GNGDLYVHIEMEPHPE-LRR 259 (371)
T ss_pred ccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCC---CCCCEEEEEEEecCCc-ccc
Confidence 013578999999999999999999998532 2399999999997764 654
No 95
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.29 E-value=2.7e-06 Score=85.94 Aligned_cols=75 Identities=16% Similarity=0.258 Sum_probs=61.5
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC----------------------------------------------------
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL---------------------------------------------------- 344 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl---------------------------------------------------- 344 (401)
++|.|+.+.+.|||.||+.|++++|...
T Consensus 134 ~~g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G 213 (397)
T PRK14281 134 IPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGG 213 (397)
T ss_pred CCCCCEEEEEEeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcc
Confidence 3589999999999999999998776441
Q ss_pred -------------------CCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCC
Q psy1364 345 -------------------DGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 345 -------------------dG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~ 393 (401)
+.++++|.||+++++|++++++|+|.+... .+..|||||+|++. |..
T Consensus 214 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDL~i~i~~~-~h~ 279 (397)
T PRK14281 214 EGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPR-GGAPGDLIVVIEEK-PHE 279 (397)
T ss_pred eeeeeCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCC-CCCCCcEEEEEEEc-CCC
Confidence 013678999999999999999999998653 24579999999976 543
No 96
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.28 E-value=2.4e-06 Score=85.82 Aligned_cols=77 Identities=25% Similarity=0.394 Sum_probs=63.1
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|+|.||+.|.++.|.- .....
T Consensus 259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~t-----------------------------------------------ld~~~ 291 (378)
T PRK14278 259 VRDGDDLHCTVSVPMVDAALGTTVTVEA-----------------------------------------------ILDGP 291 (378)
T ss_pred EEcCCCEEEEEecCHHHHhcCCeEEEec-----------------------------------------------CCCCe
Confidence 3679999999999999999999876641 01235
Q ss_pred EEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCc
Q psy1364 272 LEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRF 315 (401)
Q Consensus 272 l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f 315 (401)
++|.||+|+++|++++++|+|.+..+ +..|||||+++|.-...+
T Consensus 292 i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~L 336 (378)
T PRK14278 292 SEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRL 336 (378)
T ss_pred EEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCC
Confidence 89999999999999999999998654 468999999999855433
No 97
>KOG0723|consensus
Probab=98.25 E-value=2.8e-06 Score=67.98 Aligned_cols=57 Identities=26% Similarity=0.371 Sum_probs=48.1
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchh
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDE 145 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~ 145 (401)
.+..+..-.||||+++++.+.||+|+||.+...|||+..+ | -.-.+||||+++|...
T Consensus 52 kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGS-P---YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 52 KMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGS-P---YLASKINEAKDLLEGT 108 (112)
T ss_pred ccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCC-H---HHHHHHHHHHHHHhcc
Confidence 4556677789999999999999999999999999999987 3 2235699999999753
No 98
>KOG0568|consensus
Probab=98.23 E-value=9.3e-07 Score=80.11 Aligned_cols=57 Identities=28% Similarity=0.666 Sum_probs=50.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhh-hcchh
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYE-ILSDE 145 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~-~L~d~ 145 (401)
-..+|.+|||..+|+.+|++.||..|++++|||...+ +...++|.+|.+||. +|+..
T Consensus 46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-EADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-cccHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999865 555688999999999 77643
No 99
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=98.16 E-value=3.7e-06 Score=82.78 Aligned_cols=78 Identities=18% Similarity=0.389 Sum_probs=64.3
Q ss_pred ccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEE
Q psy1364 193 ARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHL 272 (401)
Q Consensus 193 ~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l 272 (401)
+.|.|+..+++|+|.+|+.|.+++|.- .... +
T Consensus 261 R~g~dL~~~~~Is~~~AalG~~i~vpt-----------------------------------------------l~g~-~ 292 (371)
T COG0484 261 RDGDDLYCEVPISFTEAALGGEIEVPT-----------------------------------------------LDGR-V 292 (371)
T ss_pred ECCCceEeccccCHHHHhcCCEEEEEe-----------------------------------------------cCCC-E
Confidence 568899999999999999998877651 1122 8
Q ss_pred EEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCCCcccc
Q psy1364 273 EVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHPRFERR 318 (401)
Q Consensus 273 ~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~~f~r~ 318 (401)
+|.||||++.|++++++|+|.+... ...|||||+|+|.-...+...
T Consensus 293 ~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~ 339 (371)
T COG0484 293 KLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDE 339 (371)
T ss_pred EEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHH
Confidence 9999999999999999999998765 457999999999877654433
No 100
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.09 E-value=9.1e-06 Score=82.49 Aligned_cols=74 Identities=22% Similarity=0.278 Sum_probs=61.5
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.+++.|||.||+.|.++.|.- ...+.
T Consensus 270 ~R~G~DL~~~~~Isl~eAllG~~i~I~t-----------------------------------------------LdG~~ 302 (421)
T PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITH-----------------------------------------------LDGRK 302 (421)
T ss_pred EEeCCeEEEEEeCCHHHHhcCCEEEeeC-----------------------------------------------CCCCe
Confidence 3579999999999999999999876641 12346
Q ss_pred EEEEEccc--ccCCCEEeeCCCCCCCCC--CCCccEEEEEEEeCC
Q psy1364 272 LEVEIEMG--MKDGQQTKFTAEGEPHID--GEPGDLIFHIRTLPH 312 (401)
Q Consensus 272 l~V~Ip~G--v~~G~~i~~~g~G~~~~~--g~~GDL~v~i~v~~h 312 (401)
++|.|||| +.+|++++++|+|.+..+ +..|||||+++|.-.
T Consensus 303 l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P 347 (421)
T PTZ00037 303 LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFP 347 (421)
T ss_pred EEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcC
Confidence 89999999 999999999999997544 357999999999854
No 101
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=97.87 E-value=5.6e-05 Score=79.92 Aligned_cols=71 Identities=49% Similarity=0.813 Sum_probs=66.8
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhh
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVK 160 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 160 (401)
.|||+||||+++|+.++||+|||+|+++||||++++ +.+.++|++|++||++|+||.+|+.||.||..+..
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d 72 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD 72 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence 689999999999999999999999999999999986 77889999999999999999999999999986654
No 102
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.44 E-value=0.00021 Score=64.01 Aligned_cols=54 Identities=43% Similarity=0.659 Sum_probs=47.6
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-------hHHHHHHHHHhHhhhhc
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-------DQAQAKFQELGAAYEIL 142 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-------~~a~~~f~~i~~Ay~~L 142 (401)
.+.|.+|++...++..+|+++||++...+|||+.... ..+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6889999999999999999999999999999996332 35788999999999854
No 103
>KOG3192|consensus
Probab=97.05 E-value=0.00066 Score=58.32 Aligned_cols=68 Identities=34% Similarity=0.596 Sum_probs=53.0
Q ss_pred CCccCcccccCCC--CCCCHHHHHHHHHHHHHhhCCCCCCC----c-hHHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 86 SKERDLYEVLGVP--RNADSNKIKSAYRALAKKMHPDKNPN----D-DQAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 86 ~~~~~~y~iLgv~--~~as~~eIk~ayr~l~~~~HPDk~~~----~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
....+||.++|.. ....+.-++.-|--..++.|||+... + ..|.+.-.++|+||.+|+||-+|+.|=.
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil 79 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL 79 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3457899999754 44566666668888999999999432 1 2477889999999999999999999953
No 104
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=96.60 E-value=0.0021 Score=57.79 Aligned_cols=34 Identities=15% Similarity=0.276 Sum_probs=32.2
Q ss_pred ecCCCCCCceeeceeEEEEEEEcccccCCCEEeeC
Q psy1364 255 TVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFT 289 (401)
Q Consensus 255 ~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~ 289 (401)
.+|+.|+|.|.+..++...+.+ .|+.+|++|++.
T Consensus 116 ~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 116 RECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence 5899999999999999999999 999999999875
No 105
>KOG0431|consensus
Probab=95.66 E-value=0.013 Score=60.12 Aligned_cols=45 Identities=27% Similarity=0.447 Sum_probs=32.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCCCCch---H----HHHHHHHHhHhhh
Q psy1364 96 GVPRNADSNKIKSAYRALAKKMHPDKNPNDD---Q----AQAKFQELGAAYE 140 (401)
Q Consensus 96 gv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~----a~~~f~~i~~Ay~ 140 (401)
.+..-.+.+++||||||..+..||||.+... . |++.|..+++||+
T Consensus 395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn 446 (453)
T KOG0431|consen 395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWN 446 (453)
T ss_pred chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence 4455569999999999999999999997642 1 4445555555554
No 106
>KOG0712|consensus
Probab=95.54 E-value=0.027 Score=55.11 Aligned_cols=74 Identities=20% Similarity=0.276 Sum_probs=58.5
Q ss_pred ccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEE
Q psy1364 193 ARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHL 272 (401)
Q Consensus 193 ~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l 272 (401)
+++.|+...++++|.|+..|..+.+. . ...+.+
T Consensus 249 Rrg~dL~~~~~i~l~eal~G~~~~~~-~----------------------------------------------ldGr~l 281 (337)
T KOG0712|consen 249 RRGSDLYRKLTISLVEALCGFQRVWE-T----------------------------------------------LDGRLL 281 (337)
T ss_pred ecccccceeeecchhhccccceEEEE-c----------------------------------------------cCCceE
Confidence 45777887888888888877554443 0 134578
Q ss_pred EEEEccc--ccCCCEEeeCCCCCCCCCCCCccEEEEEEEeCCC
Q psy1364 273 EVEIEMG--MKDGQQTKFTAEGEPHIDGEPGDLIFHIRTLPHP 313 (401)
Q Consensus 273 ~V~Ip~G--v~~G~~i~~~g~G~~~~~g~~GDL~v~i~v~~h~ 313 (401)
++.++|| +.+|++.+++|+|.+-.+...|||||.+.|+-.+
T Consensus 282 ~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 282 KLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYIKFEVKFPK 324 (337)
T ss_pred EEecCCCceeChhHEEeecCCCcccccCCCCcEEEEEEEEcCC
Confidence 9999999 8999999999999987776699999999998554
No 107
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.28 E-value=0.013 Score=52.37 Aligned_cols=61 Identities=31% Similarity=0.510 Sum_probs=47.2
Q ss_pred cccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCchH-----HHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 93 EVLGVPRNA--DSNKIKSAYRALAKKMHPDKNPNDDQ-----AQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 93 ~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
...|..+.+ ..+.++..|+.+.+.+|||+...... +.+.+..++.||.+|.||-+|+.|=.
T Consensus 5 ~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l 72 (174)
T COG1076 5 VLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL 72 (174)
T ss_pred cccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 344444433 34568899999999999999865422 45689999999999999999999853
No 108
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=94.41 E-value=0.078 Score=44.81 Aligned_cols=59 Identities=22% Similarity=0.216 Sum_probs=41.7
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhh
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKK 147 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~ 147 (401)
.+.......||||++.++.++|.+.|.+|-...+|++..+ .-.-.+|..|.|.|..+-+
T Consensus 54 ~Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----fYLQSKV~rAKErl~~El~ 112 (127)
T PF03656_consen 54 GMTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----FYLQSKVFRAKERLEQELK 112 (127)
T ss_dssp ---HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----HHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----HHHHHHHHHHHHHHHHHHH
Confidence 3555678899999999999999999999999999999875 3344668888888875543
No 109
>PF13446 RPT: A repeated domain in UCH-protein
Probab=85.78 E-value=1 Score=32.82 Aligned_cols=28 Identities=29% Similarity=0.570 Sum_probs=25.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHH
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAK 115 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~ 115 (401)
-.+.|+.|||+++++++.|-.+|+....
T Consensus 4 ~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 4 VEEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 3567999999999999999999999877
No 110
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=85.22 E-value=0.99 Score=33.45 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=21.0
Q ss_pred cccccccceEEEEecCceeEEEEeecCCCCCCceeec
Q psy1364 231 RKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKN 267 (401)
Q Consensus 231 ~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~ 267 (401)
..|++.|.+...+..++++. ..+..|+.|+|.|.+.
T Consensus 19 ~~C~G~G~~~~~~~~~~~~~-~~~~~C~~C~G~G~~i 54 (66)
T PF00684_consen 19 PQCNGSGQVTRRQQTPGGVF-QMQQTCPKCGGTGKII 54 (66)
T ss_dssp TTSSSSSEEEEEEESSSTTE-EEEEE-TTTSSSSEE-
T ss_pred cCCCCeeEEEEEEeCCCeEE-EEEEECCCCcceeeEE
Confidence 35677776654443333332 3456899999999764
No 111
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=83.64 E-value=2.2 Score=38.80 Aligned_cols=41 Identities=22% Similarity=0.339 Sum_probs=31.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhh
Q psy1364 98 PRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEK 146 (401)
Q Consensus 98 ~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~ 146 (401)
+++||.+||.+|+.++..+|- +|+ +.-.+|..|||.+.-..
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~-----gd~---~~~~~IEaAYD~ILM~r 41 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYA-----GDE---KSREAIEAAYDAILMER 41 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhc-----CCH---HHHHHHHHHHHHHHHHH
Confidence 579999999999999999982 222 33556999999776443
No 112
>KOG0724|consensus
Probab=80.81 E-value=1.3 Score=43.73 Aligned_cols=55 Identities=29% Similarity=0.477 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCCCC----chHHHHHHHHHhHhhhhcchhhhhhhcccc
Q psy1364 100 NADSNKIKSAYRALAKKMHPDKNPN----DDQAQAKFQELGAAYEILSDEKKRQRYDQC 154 (401)
Q Consensus 100 ~as~~eIk~ayr~l~~~~HPDk~~~----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 154 (401)
.++..+|..+|+..+..+||++... ....++.|+.|.+||++|.+.++|...|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 3678899999999999999998741 123456799999999999987666555554
No 113
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=71.14 E-value=7.7 Score=32.04 Aligned_cols=47 Identities=23% Similarity=0.338 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCchH----HHHHHHHHhHhhhhcchh
Q psy1364 99 RNADSNKIKSAYRALAKKMHPDKNPNDDQ----AQAKFQELGAAYEILSDE 145 (401)
Q Consensus 99 ~~as~~eIk~ayr~l~~~~HPDk~~~~~~----a~~~f~~i~~Ay~~L~d~ 145 (401)
+..+..+++.|.|.+-++.|||.....|+ .++-++.++.-.+.|..+
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 45677899999999999999998765543 344577777666666543
No 114
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised. Proteins in this family are typically between 333 and 377 amino acids in length and contain a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterised family of peptidase enzymes.
Probab=54.82 E-value=75 Score=31.22 Aligned_cols=59 Identities=24% Similarity=0.305 Sum_probs=39.7
Q ss_pred cCcccccCCCC-CCCHHHHHHHHHHHHHh-------hCCCCCCC---chHHHHHHHHHhHhhhhcchhhh
Q psy1364 89 RDLYEVLGVPR-NADSNKIKSAYRALAKK-------MHPDKNPN---DDQAQAKFQELGAAYEILSDEKK 147 (401)
Q Consensus 89 ~~~y~iLgv~~-~as~~eIk~ayr~l~~~-------~HPDk~~~---~~~a~~~f~~i~~Ay~~L~d~~~ 147 (401)
.++++-||++. ..|.+|+.+-.++++.+ .++|.+.. +..-++.++++.+||+.|.+.-.
T Consensus 82 ~pl~~~l~l~~~~~~~~eL~~l~~~li~~~N~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~y~~l~~~~p 151 (318)
T PF12725_consen 82 PPLSERLGLETEEYSTEELKELTEYLIEKANELREQITEDDNGVVDIPYDKEEIFEEAREGYENLAERYP 151 (318)
T ss_pred cCHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 45678899988 88999988877766544 33333211 01236789999999999885443
No 115
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=53.51 E-value=21 Score=29.48 Aligned_cols=13 Identities=15% Similarity=0.414 Sum_probs=9.2
Q ss_pred EeecCCCCCCcee
Q psy1364 253 QQTVCDECPNVRF 265 (401)
Q Consensus 253 ~~~~C~~C~G~g~ 265 (401)
.+..|+.|+|.|.
T Consensus 74 ~~~~C~~C~G~Gk 86 (111)
T PLN03165 74 EVSKCINCDGAGS 86 (111)
T ss_pred EEEECCCCCCcce
Confidence 4567888888773
No 116
>KOG0715|consensus
Probab=48.69 E-value=39 Score=32.72 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=28.9
Q ss_pred EEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEEC
Q psy1364 348 KITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEF 390 (401)
Q Consensus 348 ~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~ 390 (401)
.+.|.+|+++.++.++++++.|- .||+|.+.|.-
T Consensus 234 ~i~i~~~~g~~~~~~l~~~~~~~---------~~l~v~~~v~~ 267 (288)
T KOG0715|consen 234 DIMIVLPAGVRSADTLRFAGHGN---------DDLFVRLIVAK 267 (288)
T ss_pred eEEeecCcccccccEEEEecCCc---------ceEEEEEEecc
Confidence 47889999999999999998752 29999999874
No 117
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=48.13 E-value=66 Score=24.39 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=26.0
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCC
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNP 123 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~ 123 (401)
+|--++.|+++-|+..||+.|-++..+|..=-..|
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~P 37 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHP 37 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCc
Confidence 34447889999999999999987777775433333
No 118
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=46.34 E-value=52 Score=23.10 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=30.3
Q ss_pred CCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCC
Q psy1364 335 TGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMP 371 (401)
Q Consensus 335 ~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p 371 (401)
.+....|-|.||+.++|+.+++.+-|+.+.+.-.-..
T Consensus 4 ~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~ 40 (56)
T PF12791_consen 4 KKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDII 40 (56)
T ss_pred cCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhc
Confidence 3567889999999999999888999999988765443
No 119
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=44.63 E-value=28 Score=29.45 Aligned_cols=24 Identities=13% Similarity=0.203 Sum_probs=18.4
Q ss_pred eeEEEEEEEcccccCCCEEeeCCC
Q psy1364 268 EEHHLEVEIEMGMKDGQQTKFTAE 291 (401)
Q Consensus 268 ~~~~l~V~Ip~Gv~~G~~i~~~g~ 291 (401)
+...+++.-+.+++.||.+.+.-.
T Consensus 40 ~~~~~~~~~~~~~~~GD~V~v~i~ 63 (135)
T PF04246_consen 40 KPITFRAPNPIGAKVGDRVEVEIP 63 (135)
T ss_pred CcEEEEecCCCCCCCCCEEEEEec
Confidence 456777778888899988887654
No 120
>PF12991 DUF3875: Domain of unknown function, B. Theta Gene description (DUF3875); InterPro: IPR024451 This domain of unknown function is found in proteins from Bacteroidetes, including the conjugation system ATPase, TraG.
Probab=40.84 E-value=22 Score=25.19 Aligned_cols=23 Identities=39% Similarity=0.603 Sum_probs=18.5
Q ss_pred CCccEEEEEEEECCCC-CCChhhh
Q psy1364 378 AKGVLYITFDVEFPKN-ELSEEEK 400 (401)
Q Consensus 378 ~~GdL~i~~~v~~P~~-~ls~~qk 400 (401)
+.||+.|-|+|.+|+- .||+++.
T Consensus 26 k~gDiTv~f~v~LPEiFtls~~eY 49 (54)
T PF12991_consen 26 KNGDITVAFRVELPEIFTLSEAEY 49 (54)
T ss_pred cCCCEEEEEEecCCeeEEechhHh
Confidence 3699999999999985 4666654
No 121
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=39.64 E-value=1.4e+02 Score=22.80 Aligned_cols=52 Identities=21% Similarity=0.247 Sum_probs=33.3
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHH-HHHHHHHhHhhhhcch
Q psy1364 93 EVLGVPRNADSNKIKSAYRALAKKMHPDKNPND--DQA-QAKFQELGAAYEILSD 144 (401)
Q Consensus 93 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~a-~~~f~~i~~Ay~~L~d 144 (401)
.+-|+.+.|+++||..|=.+..+|..=-..|+. .+| +..-.+|..|-.-|.|
T Consensus 7 ~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 7 TLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 556788999999999999888888654444432 122 2234455555554443
No 122
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=38.31 E-value=40 Score=20.37 Aligned_cols=17 Identities=18% Similarity=0.259 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHhhCC
Q psy1364 103 SNKIKSAYRALAKKMHP 119 (401)
Q Consensus 103 ~~eIk~ayr~l~~~~HP 119 (401)
.++.+.+.|+.|+.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 47889999999999993
No 123
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=38.31 E-value=17 Score=18.34 Aligned_cols=13 Identities=54% Similarity=0.810 Sum_probs=9.7
Q ss_pred HHHHHhHhhhhcc
Q psy1364 131 KFQELGAAYEILS 143 (401)
Q Consensus 131 ~f~~i~~Ay~~L~ 143 (401)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4777888888774
No 124
>KOG3442|consensus
Probab=34.67 E-value=60 Score=27.24 Aligned_cols=56 Identities=18% Similarity=0.155 Sum_probs=40.5
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchh
Q psy1364 86 SKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDE 145 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~ 145 (401)
+.....-+||+|+...+.+||.+.|..|-....+.|..+ .-.-.++-.|-|-|..+
T Consensus 56 iTlqEa~qILnV~~~ln~eei~k~yehLFevNdkskGGS----FYLQSKVfRAkErld~E 111 (132)
T KOG3442|consen 56 ITLQEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGS----FYLQSKVFRAKERLDEE 111 (132)
T ss_pred ccHHHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCcc----eeehHHHHHHHHHHHHH
Confidence 455667799999999999999999999999888887754 11123344555555433
No 125
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=33.36 E-value=1.2e+02 Score=26.80 Aligned_cols=69 Identities=20% Similarity=0.187 Sum_probs=58.8
Q ss_pred CcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCC
Q psy1364 321 DLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPK 392 (401)
Q Consensus 321 Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~ 392 (401)
++...+.++..+++.+....+.-..+....+.++.+...+..+++.+++.... ...++.+.++.+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 218 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGALEGKALRLKGLLKSAR---GALGKARLKELSKRHP 218 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCcccccCceeeecccCCcCC---CCcccceeeeeccCCC
Confidence 88889999999999999988888877655578999999999999999998754 4578999998887644
No 126
>PF04719 TAFII28: hTAFII28-like protein conserved region; InterPro: IPR006809 The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcription preinitiation complex. The conserved region is found at the C terminus of most member proteins. The crystal structure of hTAFII28 with hTAFII18 shows that this region is involved in the binding of these two subunits. The conserved region contains four alpha helices and three loops arranged as in histone H3 [, ].; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005634 nucleus; PDB: 1BH9_B 1BH8_B.
Probab=31.68 E-value=82 Score=24.93 Aligned_cols=14 Identities=29% Similarity=0.620 Sum_probs=10.5
Q ss_pred CCCHHHHHHHHHHH
Q psy1364 100 NADSNKIKSAYRAL 113 (401)
Q Consensus 100 ~as~~eIk~ayr~l 113 (401)
...+..|++|||+|
T Consensus 77 pl~P~hlreA~rrL 90 (90)
T PF04719_consen 77 PLQPDHLREAYRRL 90 (90)
T ss_dssp S--HHHHHHHHHHH
T ss_pred CCCcHHHHHHHHhC
Confidence 44788999999997
No 127
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=28.78 E-value=1.3e+02 Score=26.29 Aligned_cols=22 Identities=23% Similarity=0.311 Sum_probs=13.7
Q ss_pred eEEEEEEEcccccCCCEEeeCC
Q psy1364 269 EHHLEVEIEMGMKDGQQTKFTA 290 (401)
Q Consensus 269 ~~~l~V~Ip~Gv~~G~~i~~~g 290 (401)
...++|.-+.+++.||.+.+.-
T Consensus 48 ~~~~~v~~~~~~~vGD~V~v~i 69 (154)
T PRK10862 48 THQLVVPSSQPLVPGQKVELGI 69 (154)
T ss_pred ceEEEecCCCCCCCCCEEEEec
Confidence 3456666666677776666543
No 128
>COG2879 Uncharacterized small protein [Function unknown]
Probab=28.37 E-value=79 Score=23.22 Aligned_cols=28 Identities=36% Similarity=0.493 Sum_probs=19.2
Q ss_pred HHHHHHHhhCCCCCCCchHHHHHHHHHhHh
Q psy1364 109 AYRALAKKMHPDKNPNDDQAQAKFQELGAA 138 (401)
Q Consensus 109 ayr~l~~~~HPDk~~~~~~a~~~f~~i~~A 138 (401)
-|-.-+++.|||+.+- .-+|-|.+-.+|
T Consensus 27 nYVehmr~~hPd~p~m--T~~EFfrec~da 54 (65)
T COG2879 27 NYVEHMRKKHPDKPPM--TYEEFFRECQDA 54 (65)
T ss_pred HHHHHHHHhCcCCCcc--cHHHHHHHHHHh
Confidence 4777888999999874 234556655543
No 129
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=26.84 E-value=1.9e+02 Score=27.49 Aligned_cols=70 Identities=16% Similarity=0.232 Sum_probs=48.3
Q ss_pred CCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHc-------CCCEEEEecCCCcEEE----EEcCCCCCCCcEEEEcC
Q psy1364 299 EPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDAL-------TGFKFDIDQLDGRKIT----VERQKITWPGARIRKKN 367 (401)
Q Consensus 299 ~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl-------~G~~~~i~tldG~~l~----v~i~~~~~~g~~~~l~g 367 (401)
.+||++|.-++.||..-+.-.-==++.-+|++.++. +..-..|.|--|..+- +.|.|.++.|+++|+..
T Consensus 79 L~GDVii~ThIcp~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDTTKGNRiin~~GfAisPtvKeGyILrvse 158 (276)
T PF06675_consen 79 LPGDVIITTHICPDAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDTTKGNRIINHRGFAISPTVKEGYILRVSE 158 (276)
T ss_pred cCCcEEEEEecCCCCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEecCCCceeeccCCeEecccccceEEEEcCH
Confidence 578999999998876544433333555666666654 2345788888785432 45778899999999865
Q ss_pred C
Q psy1364 368 E 368 (401)
Q Consensus 368 ~ 368 (401)
.
T Consensus 159 d 159 (276)
T PF06675_consen 159 D 159 (276)
T ss_pred H
Confidence 4
No 130
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=26.20 E-value=31 Score=32.33 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=20.9
Q ss_pred ecCCCCCCceeeceeE--EEEEEEcccccCCCEEeeC
Q psy1364 255 TVCDECPNVRFKNEEH--HLEVEIEMGMKDGQQTKFT 289 (401)
Q Consensus 255 ~~C~~C~G~g~v~~~~--~l~V~Ip~Gv~~G~~i~~~ 289 (401)
.+|++|+|.|.+..+. .+---|| .+.+|++-+
T Consensus 39 vtCPTCqGtGrIP~eqe~qLVALIP---y~DqRLKPr 72 (238)
T PF07092_consen 39 VTCPTCQGTGRIPREQENQLVALIP---YSDQRLKPR 72 (238)
T ss_pred CcCCCCcCCccCCccchhcEEEEEe---ccccccCCc
Confidence 4799999999877543 4444566 344555443
No 131
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=24.65 E-value=55 Score=25.88 Aligned_cols=20 Identities=30% Similarity=0.597 Sum_probs=17.5
Q ss_pred EEEEEEEECCCCCCChhhhC
Q psy1364 382 LYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 382 L~i~~~v~~P~~~ls~~qk~ 401 (401)
.+.-++|+.|...||++|++
T Consensus 62 ~~~~iEvK~p~~~ls~~Q~~ 81 (100)
T PF08774_consen 62 IFLFIEVKGPGDRLSPNQKE 81 (100)
T ss_pred EEEEEEEcCCCCCcCHHHHH
Confidence 68889999998789999974
No 132
>KOG4684|consensus
Probab=24.00 E-value=69 Score=29.46 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=49.2
Q ss_pred ehhhcccchhhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcCCcccccccCCCCCCCCCCCCCCccCcccccCCCC
Q psy1364 20 TIFRKNYLHKRSVMTLLRRFYSFLKYFVFVIMAVVFIVLLLEHFTDPPKVKRTHRGFNPYPPRPKASKERDLYEVLGVPR 99 (401)
Q Consensus 20 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~iLgv~~ 99 (401)
++..++.-+.+...++-.++++..-...+++.+.+++......+...+ ....|.... ....-.-.|+++.+.
T Consensus 186 tnaLArCPHCrKvSsvGsrfar~Ra~~ffilal~~avta~~lt~gT~s----~a~~~gg~y---f~~~fv~~~~~~~l~- 257 (275)
T KOG4684|consen 186 TNALARCPHCRKVSSVGSRFARRRALLFFILALTVAVTAVILTMGTAS----VAPVFGGSY---FFNNFVGKYKIYNLP- 257 (275)
T ss_pred HHHHhcCCcccchhhhhhHHhhhhhHHHHHHHHHHHHHHHHHHhhhhh----hccccchhH---HHHHHHHHHHHHhhH-
Confidence 344566667777788888888888877777766666665555442211 000111000 000001124444443
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCC
Q psy1364 100 NADSNKIKSAYRALAKKMHPDKN 122 (401)
Q Consensus 100 ~as~~eIk~ayr~l~~~~HPDk~ 122 (401)
+.+|.++++..||+-+
T Consensus 258 -------r~~Y~~~~kvs~~~~~ 273 (275)
T KOG4684|consen 258 -------RDFYKKLAKVSKKKEK 273 (275)
T ss_pred -------HHHHHHHHHhcccccC
Confidence 5689999999999864
No 133
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=22.97 E-value=1.6e+02 Score=20.59 Aligned_cols=42 Identities=24% Similarity=0.305 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 107 KSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 107 k~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
.+.+|...+.-|||.+ ..+..+.+.+.|..|++.++....|.
T Consensus 12 ~~~~~~~~~~~~~~~~-----~~~i~~~~~~~W~~l~~~~k~~y~~~ 53 (66)
T cd00084 12 SQEHRAEVKAENPGLS-----VGEISKILGEMWKSLSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHHCcCCC-----HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4556677777888854 34667889999999998776655554
No 134
>CHL00185 ycf59 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional
Probab=21.65 E-value=2.1e+02 Score=28.26 Aligned_cols=61 Identities=11% Similarity=0.120 Sum_probs=41.7
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCC-CCchHHHHHHHHHhHhhhhcchhh
Q psy1364 86 SKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKN-PNDDQAQAKFQELGAAYEILSDEK 146 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~-~~~~~a~~~f~~i~~Ay~~L~d~~ 146 (401)
....++|+.|||++..-+.++-+.-...+.+.-|-.. -++|.-......+.++...|.+-.
T Consensus 247 ~~R~~Fy~alGld~~~yD~~Vi~~Tn~~a~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~~~~ 308 (351)
T CHL00185 247 LQRSDFYAAIGLDARQFDMHVIRKTNESAARLFPVVLDVDNPKFFKYLDQCACANLKLIEID 308 (351)
T ss_pred cchHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999977666665556666777777664 344666666777777777665433
No 135
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=21.52 E-value=1.4e+02 Score=23.99 Aligned_cols=52 Identities=17% Similarity=0.372 Sum_probs=34.3
Q ss_pred CCCCCC-CHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhcc-ccch
Q psy1364 96 GVPRNA-DSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYD-QCGM 156 (401)
Q Consensus 96 gv~~~a-s~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd-~~g~ 156 (401)
|+++++ ...++-+.++.++..+++.. .+.+..+.+.| +.||.-+..|| .++.
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~~~-------~~~~~~l~~~y--~~~~~~~~~~~~~~~~ 104 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTGGD-------PELLRGLAQMY--VEDPRFAAMYDKKFGP 104 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS----------HHHHHHHHHHT--TSTHHHHHHHG-GGST
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhCCC-------HHHHHHHHHHH--HcCHHHHhhccccCCH
Confidence 556654 34457777888888777721 34678888888 78899999998 6665
No 136
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=21.00 E-value=1.4e+02 Score=24.82 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=29.4
Q ss_pred EEcCCCCCCCcEEEEcCCCCCCCCC-----CCCCccEEEEEEEECCCC
Q psy1364 351 VERQKITWPGARIRKKNEGMPSYEN-----NNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 351 v~i~~~~~~g~~~~l~g~G~p~~~~-----~~~~GdL~i~~~v~~P~~ 393 (401)
..+|.+..+|+.+.|.|.=.+..+. ....+|+.++|++.|+++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~~ 50 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNEN 50 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCCC
Confidence 4577788999999998764432211 112369999999998863
No 137
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=20.64 E-value=1.5e+02 Score=24.99 Aligned_cols=51 Identities=16% Similarity=0.080 Sum_probs=34.9
Q ss_pred EEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcE
Q psy1364 305 FHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGAR 362 (401)
Q Consensus 305 v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~ 362 (401)
+.|.|..+..+ .+|++-.+.|+|.+...+-. .+.+.++.+........|++
T Consensus 60 L~v~V~dkd~~---~DD~lG~v~i~L~~v~~~~~----~~~~~Wy~L~~~~~~~~~~~ 110 (127)
T cd08394 60 LVIELWNKGLI---WDTLVGTVWIPLSTIRQSNE----EGPGEWLTLDSEVNMKNGQI 110 (127)
T ss_pred EEEEEEeCCCc---CCCceEEEEEEhHHcccCCC----CCCCccEecChHHhccCCeE
Confidence 44455455533 89999999999999988833 55566777775445555544
No 138
>TIGR02029 AcsF magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase. This model respresents the oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under aerobic conditions. This enzyme is believed to utilize a binuclear iron center and molecular oxygen. There are two isoforms of this enzyme in some plants and cyanobacterai which are differentially regulated based on the levels of copper and oxygen. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under aerobic conditions (a separate enzyme, BchE, acts under anaerobic conditions). This enzyme is found in plants, cyanobacteria and other photosynthetic bacteria.
Probab=20.09 E-value=3e+02 Score=27.08 Aligned_cols=59 Identities=12% Similarity=0.179 Sum_probs=38.8
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCC-CCchHHHHHHHHHhHhhhhcch
Q psy1364 86 SKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKN-PNDDQAQAKFQELGAAYEILSD 144 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~-~~~~~a~~~f~~i~~Ay~~L~d 144 (401)
....++|+.|||++..-+.++-+.-...+.+.-|-.. -++|.-......+.++...|.+
T Consensus 241 ~~R~~Fy~alGld~~~yD~~Vi~~Tne~s~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~~ 300 (337)
T TIGR02029 241 HQRPGFYEALGLDATDFDLQVFRNTNETSGRIFPMTLNTEHPRFRRLLDRMAGYSEKISA 300 (337)
T ss_pred cccHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCCHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999977666655555666677777654 3346655556666666665543
Done!