Query psy1364
Match_columns 401
No_of_seqs 371 out of 2693
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 16:28:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1364.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1364hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 1.1E-64 3.9E-69 493.6 18.0 274 85-401 24-308 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 3.3E-48 1.1E-52 364.4 22.0 209 191-401 7-245 (248)
3 3agx_A DNAJ homolog subfamily 100.0 2.5E-46 8.5E-51 335.6 20.2 172 195-401 2-173 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 6.9E-44 2.4E-48 319.6 20.6 171 194-401 2-173 (180)
5 1c3g_A Heat shock protein 40; 100.0 3.5E-42 1.2E-46 305.8 16.6 166 196-401 1-167 (170)
6 3i38_A Putative chaperone DNAJ 99.9 7.3E-25 2.5E-29 179.8 9.5 87 310-401 2-88 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 3.6E-23 1.2E-27 173.0 9.7 87 314-401 1-90 (121)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.7E-23 6E-28 170.2 6.0 75 88-162 2-76 (103)
9 1hdj_A Human HSP40, HDJ-1; mol 99.9 2E-22 7E-27 155.2 6.8 73 88-161 2-74 (77)
10 2dn9_A DNAJ homolog subfamily 99.9 2.8E-22 9.4E-27 155.2 6.0 74 85-158 3-76 (79)
11 2ctr_A DNAJ homolog subfamily 99.9 8.2E-22 2.8E-26 155.7 7.8 76 86-162 4-79 (88)
12 2ej7_A HCG3 gene; HCG3 protein 99.8 9.1E-22 3.1E-26 153.4 6.7 75 85-159 5-80 (82)
13 2ctp_A DNAJ homolog subfamily 99.8 1.1E-21 3.6E-26 151.5 6.5 72 86-158 4-75 (78)
14 2ctw_A DNAJ homolog subfamily 99.8 2.4E-21 8.1E-26 159.1 7.6 78 84-161 12-89 (109)
15 2dmx_A DNAJ homolog subfamily 99.8 2E-21 6.8E-26 154.8 6.4 77 85-161 5-82 (92)
16 2ctq_A DNAJ homolog subfamily 99.8 1.7E-21 5.7E-26 160.9 5.9 75 86-160 17-91 (112)
17 2yua_A Williams-beuren syndrom 99.8 5E-21 1.7E-25 154.5 7.9 77 84-160 12-90 (99)
18 2cug_A Mkiaa0962 protein; DNAJ 99.8 3.1E-21 1.1E-25 152.4 6.3 73 85-158 13-85 (88)
19 2och_A Hypothetical protein DN 99.8 3.5E-21 1.2E-25 146.7 6.3 69 86-157 5-73 (73)
20 2lgw_A DNAJ homolog subfamily 99.8 3.5E-21 1.2E-25 155.2 6.0 73 89-161 2-75 (99)
21 2o37_A Protein SIS1; HSP40, J- 99.8 8.7E-21 3E-25 151.0 6.5 74 86-162 5-78 (92)
22 1wjz_A 1700030A21RIK protein; 99.8 3.2E-20 1.1E-24 148.3 5.3 72 85-156 12-89 (94)
23 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 9.4E-20 3.2E-24 149.7 4.5 72 86-157 12-87 (109)
24 3apq_A DNAJ homolog subfamily 99.8 1.7E-19 5.8E-24 164.6 4.8 73 89-161 2-74 (210)
25 2ys8_A RAB-related GTP-binding 99.7 8.4E-19 2.9E-23 138.9 5.4 62 88-150 26-87 (90)
26 2l6l_A DNAJ homolog subfamily 99.7 2.7E-18 9.2E-23 149.8 6.2 73 85-157 6-84 (155)
27 1faf_A Large T antigen; J doma 99.7 1.6E-18 5.3E-23 133.8 4.2 67 87-158 9-77 (79)
28 1gh6_A Large T antigen; tumor 99.7 6.3E-19 2.2E-23 145.2 1.0 65 88-156 7-73 (114)
29 1iur_A KIAA0730 protein; DNAJ 99.7 2E-18 6.9E-23 135.7 3.4 67 85-151 12-79 (88)
30 2pf4_E Small T antigen; PP2A, 99.7 9.6E-19 3.3E-23 153.9 1.2 66 87-156 9-76 (174)
31 3hho_A CO-chaperone protein HS 99.7 2.5E-17 8.5E-22 146.1 5.1 67 88-154 3-76 (174)
32 2qwo_B Putative tyrosine-prote 99.7 1.8E-17 6.1E-22 130.8 2.5 56 89-144 33-91 (92)
33 1n4c_A Auxilin; four helix bun 99.7 2.9E-17 1E-21 145.3 3.9 64 88-151 116-182 (182)
34 1fpo_A HSC20, chaperone protei 99.6 4.6E-17 1.6E-21 143.9 4.0 66 90-155 2-74 (171)
35 3bvo_A CO-chaperone protein HS 99.6 1.3E-16 4.5E-21 145.0 5.6 68 86-153 40-114 (207)
36 2guz_A Mitochondrial import in 99.6 9.7E-17 3.3E-21 121.2 3.7 60 85-148 10-70 (71)
37 3apo_A DNAJ homolog subfamily 99.6 8.3E-17 2.8E-21 174.0 2.8 78 85-162 17-94 (780)
38 3ag7_A Putative uncharacterize 99.6 1.3E-16 4.3E-21 129.8 2.0 59 87-146 39-104 (106)
39 3uo3_A J-type CO-chaperone JAC 99.6 5.6E-16 1.9E-20 138.0 3.1 67 86-155 8-81 (181)
40 2guz_B Mitochondrial import in 99.0 3.1E-10 1.1E-14 83.3 3.7 54 88-145 3-59 (65)
41 2y4t_A DNAJ homolog subfamily 99.0 4E-10 1.4E-14 111.4 5.4 65 89-153 382-449 (450)
42 3i38_A Putative chaperone DNAJ 98.9 2.1E-09 7.2E-14 87.6 7.7 75 193-316 9-83 (109)
43 1xao_A YDJ1, mitochondrial pro 98.9 2.2E-09 7.6E-14 89.2 6.4 75 193-314 4-81 (121)
44 1c3g_A Heat shock protein 40; 98.8 1.5E-08 5E-13 89.3 7.8 71 320-392 1-79 (170)
45 2q2g_A HSP40 protein, heat sho 98.7 1.7E-08 5.7E-13 89.7 7.6 73 319-393 3-86 (180)
46 3agx_A DNAJ homolog subfamily 98.7 4.7E-08 1.6E-12 86.9 8.3 72 319-393 2-86 (181)
47 3lz8_A Putative chaperone DNAJ 98.6 2.3E-08 8E-13 96.9 6.1 74 317-392 138-224 (329)
48 2ctt_A DNAJ homolog subfamily 98.6 3.7E-09 1.3E-13 85.5 -1.2 79 195-276 1-103 (104)
49 1nlt_A Protein YDJ1, mitochond 98.4 3.2E-07 1.1E-11 85.6 6.4 76 192-314 158-236 (248)
50 1exk_A DNAJ protein; extended 88.5 0.16 5.6E-06 37.7 1.6 51 212-267 1-63 (79)
51 2pzi_A Probable serine/threoni 86.0 0.37 1.3E-05 50.6 3.1 46 88-141 628-675 (681)
52 3lcz_A YCZA, inhibitor of trap 68.4 2.1 7.1E-05 29.4 1.5 15 255-269 24-38 (53)
53 2bx9_A Anti-trap, AT, tryptoph 53.8 5.4 0.00019 27.3 1.5 14 255-268 24-37 (53)
54 2cqn_A Formin-binding protein 51.4 24 0.00082 25.9 4.9 54 102-156 7-63 (77)
55 2ctt_A DNAJ homolog subfamily 34.5 1.8 6.1E-05 33.9 -4.0 25 319-343 1-25 (104)
56 3pmq_A Decaheme cytochrome C M 33.2 1.7 5.8E-05 45.5 -5.5 28 199-226 168-195 (669)
57 2b7e_A PRE-mRNA processing pro 28.2 79 0.0027 22.0 4.2 49 104-155 3-56 (59)
58 1uzc_A Hypothetical protein FL 28.1 1.2E+02 0.0042 21.7 5.4 56 100-156 11-67 (71)
59 3zxf_A Galectin-7; sugar bindi 26.1 1.1E+02 0.0038 24.7 5.5 45 349-393 8-60 (138)
60 2xzz_A Protein-glutamine gamma 23.6 2.3E+02 0.008 21.6 6.7 67 317-387 17-86 (102)
61 4a3n_A Transcription factor SO 22.2 1.2E+02 0.0042 20.8 4.5 42 107-153 14-55 (71)
62 1hry_A Human SRY; DNA, DNA-bin 20.9 1.3E+02 0.0043 21.2 4.4 42 107-153 16-57 (76)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=1.1e-64 Score=493.60 Aligned_cols=274 Identities=31% Similarity=0.506 Sum_probs=152.2
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc--
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE-- 162 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-- 162 (401)
.+...|||+||||+++||.+|||+|||+||++||||++++ +.|+++|++|++||++|+||.+|+.||+|+......+
T Consensus 24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~ 102 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFG 102 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcc
Confidence 4566899999999999999999999999999999999986 6789999999999999999999999999954421110
Q ss_pred -Cc---ccc--CCCCCCccCCCCcCCCCC--CccccccccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccc
Q psy1364 163 -GM---MEG--MDPFSSFFGDFGFHFGGE--NEREREVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCN 234 (401)
Q Consensus 163 -~~---~~~--~~~f~~~f~~~~~~fg~~--~~~~~~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~ 234 (401)
+. +++ ...|+++|++| ||++ .++....++|.|+.+++.|||+|+|.|+++++.+.+.++|.
T Consensus 103 ~~~~~~~~~f~~~~f~diF~~~---Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g-------- 171 (329)
T 3lz8_A 103 RQRQTHEQSYSQQDFDDIFSSM---FGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNV-------- 171 (329)
T ss_dssp -------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCS--------
T ss_pred cccccccCCcCCCchhhhhHhh---hcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeecC--------
Confidence 00 011 12355555543 4331 11122356899999999999999999999999987765321
Q ss_pred cccceEEEEecCceeEEEEeecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCC-CCCccEEEEEEEeCCC
Q psy1364 235 CRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHID-GEPGDLIFHIRTLPHP 313 (401)
Q Consensus 235 c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~-g~~GDL~v~i~v~~h~ 313 (401)
.|...+...++++|.|||||++|++|+|+|+|+++++ +.+|||||+|+++||+
T Consensus 172 --------------------------~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~ 225 (329)
T 3lz8_A 172 --------------------------FGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHP 225 (329)
T ss_dssp --------------------------CC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCCCS
T ss_pred --------------------------CeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEecCC
Confidence 1111233467899999999999999999999999875 6899999999999999
Q ss_pred CccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCC
Q psy1364 314 RFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 314 ~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~ 393 (401)
.|+|+|+||+++++|+++||++|++++|+||||+ +.|+||++++||+++||+|+|||.. +.+|||||+|+|.||++
T Consensus 226 ~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v~~~V~~P~~ 301 (329)
T 3lz8_A 226 LFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKIVMPTK 301 (329)
T ss_dssp SCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEEEEEECCCSS
T ss_pred ccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEEEEEEECCCC
Confidence 9999999999999999999999999999999997 7999999999999999999999975 36899999999999997
Q ss_pred CCChhhhC
Q psy1364 394 ELSEEEKE 401 (401)
Q Consensus 394 ~ls~~qk~ 401 (401)
||++||+
T Consensus 302 -l~~~q~~ 308 (329)
T 3lz8_A 302 -PDEKARE 308 (329)
T ss_dssp -CCHHHHH
T ss_pred -CCHHHHH
Confidence 9999984
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=3.3e-48 Score=364.44 Aligned_cols=209 Identities=34% Similarity=0.549 Sum_probs=174.4
Q ss_pred ccccCcceeecccccHHHHhcCceEEEEeccccccCC-CC----------Ccccccccce-EEEEecCceeEEEE-----
Q psy1364 191 EVARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPA-LG----------TRKCNCRQEM-QTRQLGPGRFQMMQ----- 253 (401)
Q Consensus 191 ~~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~-~~----------~~~C~c~~~~-~~~~~g~g~~~~~~----- 253 (401)
++++|+|+.++|.|||||+|+|+++++.+.+.+.|+. .| |..|++.|.+ ..+++|+ ++++.+
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~ 85 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV 85 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence 3467999999999999999999999999999888752 11 2345555543 3455666 443333
Q ss_pred ----------eecCCCCCCceeeceeEEEEEEEcccccCCCEEeeCCCCCCCCCCCCccEEEEEEEeCCCCccccCCCcE
Q psy1364 254 ----------QTVCDECPNVRFKNEEHHLEVEIEMGMKDGQQTKFTAEGEPHIDGEPGDLIFHIRTLPHPRFERRGDDLY 323 (401)
Q Consensus 254 ----------~~~C~~C~G~g~v~~~~~l~V~Ip~Gv~~G~~i~~~g~G~~~~~g~~GDL~v~i~v~~h~~f~r~g~Dl~ 323 (401)
..+|+.|+|.|++.+.++++|+|||||++|++|+|+|+|++++++.+|||||+|++++|+.|+|+|+||+
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence 3467788888899999999999999999999999999999999899999999999999999999999999
Q ss_pred EEEEecHHHHcCCCEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCC-CCChhhh
Q psy1364 324 TNITISLQDALTGFKFDIDQLDGRKITVERQKI--TWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKN-ELSEEEK 400 (401)
Q Consensus 324 ~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~--~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~-~ls~~qk 400 (401)
++++|||+||++|++++|+||||+.+.|+||++ ++||++++|+|+|||..+++ .+|||||+|+|+||++ .||++||
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~ 244 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL 244 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence 999999999999999999999998799999988 99999999999999986554 6899999999999984 2999998
Q ss_pred C
Q psy1364 401 E 401 (401)
Q Consensus 401 ~ 401 (401)
+
T Consensus 245 ~ 245 (248)
T 1nlt_A 245 K 245 (248)
T ss_dssp -
T ss_pred H
Confidence 5
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=2.5e-46 Score=335.59 Aligned_cols=172 Identities=30% Similarity=0.549 Sum_probs=159.1
Q ss_pred CcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEEEE
Q psy1364 195 GANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEV 274 (401)
Q Consensus 195 g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V 274 (401)
++|+.++++|||||+|+|+++++.+. ..|..|+|.|++.+.++++|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~----------------------------------~~c~~c~G~g~~~~~~~l~V 47 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKIS----------------------------------HKRLNPDGKSIRNEDKILTI 47 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEE----------------------------------EEEECTTSSCEEEEEEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEe----------------------------------cccCCCCCceEEEEeEEEEE
Confidence 46899999999999999999988753 35889999999999999999
Q ss_pred EEcccccCCCEEeeCCCCCCCCCCCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcC
Q psy1364 275 EIEMGMKDGQQTKFTAEGEPHIDGEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQ 354 (401)
Q Consensus 275 ~Ip~Gv~~G~~i~~~g~G~~~~~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~ 354 (401)
+|||||++|++|+|+|+|++++++.+|||||+|++++|+.|+|+|+||+++++||++||++|++++|+|+||+.+.|++|
T Consensus 48 ~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~ 127 (181)
T 3agx_A 48 EVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK 127 (181)
T ss_dssp EECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEEC
T ss_pred EECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred CCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 355 KITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 355 ~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
++++||++++|+|+|||..++++.+|||||+|+|.||++ ||++||+
T Consensus 128 ~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~-ls~~q~~ 173 (181)
T 3agx_A 128 DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPER-IPQTSRT 173 (181)
T ss_dssp SCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSC-CCHHHHH
T ss_pred CccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCC-CCHHHHH
Confidence 999999999999999998755567899999999999997 9999984
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.9e-44 Score=319.57 Aligned_cols=171 Identities=37% Similarity=0.602 Sum_probs=156.5
Q ss_pred cCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEEE
Q psy1364 194 RGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLE 273 (401)
Q Consensus 194 ~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~ 273 (401)
+++|+.++++|||||+|+|+++++.+.+.+.|+ . +++.+.++++
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~--------------------------------~----g~~~~~~~l~ 45 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIE--------------------------------H----KVRNEENIVE 45 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEET--------------------------------T----EEEEEEEEEE
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecC--------------------------------C----ceEEeeEEEE
Confidence 478999999999999999999999988766542 1 4566789999
Q ss_pred EEEcccccCCCEEeeCCCCCC-CCCCCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEE
Q psy1364 274 VEIEMGMKDGQQTKFTAEGEP-HIDGEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVE 352 (401)
Q Consensus 274 V~Ip~Gv~~G~~i~~~g~G~~-~~~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~ 352 (401)
|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++++||++||++|++++|+|+||+.+.|+
T Consensus 46 V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ 125 (180)
T 2q2g_A 46 VEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIP 125 (180)
T ss_dssp EEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEE
T ss_pred EEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEE
Confidence 999999999999999999999 5678999999999999999999999999999999999999999999999999889999
Q ss_pred cCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 353 RQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 353 i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
+|++++||++++|+|+|||..++++.+|||||+|+|.||++ ||++||+
T Consensus 126 ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~-Ls~~q~~ 173 (180)
T 2q2g_A 126 IKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKS-LTPEQKK 173 (180)
T ss_dssp ECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSC-CCHHHHH
T ss_pred CCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCC-CCHHHHH
Confidence 99999999999999999998765567899999999999996 9999984
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=3.5e-42 Score=305.77 Aligned_cols=166 Identities=26% Similarity=0.530 Sum_probs=150.5
Q ss_pred cceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEEEEE
Q psy1364 196 ANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHLEVE 275 (401)
Q Consensus 196 ~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l~V~ 275 (401)
+|+.++++|||+|+|+|+++++.+.+.. +. |.+ +.++++|+
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~------------------------------------~~--G~~-~~~~l~V~ 41 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG------------------------------------PH--GAS-EKTQIDIQ 41 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE------------------------------------TT--TEE-EEEEEEEE
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec------------------------------------CC--CcE-EeEEEEEE
Confidence 4789999999999999999999875431 11 223 67899999
Q ss_pred EcccccCCCEEeeCCCCCCC-CCCCCccEEEEEEEeCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcC
Q psy1364 276 IEMGMKDGQQTKFTAEGEPH-IDGEPGDLIFHIRTLPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQ 354 (401)
Q Consensus 276 Ip~Gv~~G~~i~~~g~G~~~-~~g~~GDL~v~i~v~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~ 354 (401)
|||||++|++|+|+|+|+++ +++.+|||||+|++++|+.|+|+|+||+++++||++||++|+++.|+|+||+.+.|++|
T Consensus 42 Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~ 121 (170)
T 1c3g_A 42 LKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRV 121 (170)
T ss_dssp CCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEES
T ss_pred eCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECC
Confidence 99999999999999999965 56789999999999999999999999999999999999999999999999987999999
Q ss_pred CCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECCCCCCChhhhC
Q psy1364 355 KITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFPKNELSEEEKE 401 (401)
Q Consensus 355 ~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P~~~ls~~qk~ 401 (401)
++++||++++|+|+|||..++++.+|||||+|+|.||++ ||++||+
T Consensus 122 ~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~-Ls~~q~~ 167 (170)
T 1c3g_A 122 QPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS-LNDAQKR 167 (170)
T ss_dssp SCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS-CCTTHHH
T ss_pred CccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCC-CCHHHHH
Confidence 999999999999999998765567899999999999997 9999984
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.91 E-value=7.3e-25 Score=179.75 Aligned_cols=87 Identities=24% Similarity=0.381 Sum_probs=80.7
Q ss_pred eCCCCccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEE
Q psy1364 310 LPHPRFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVE 389 (401)
Q Consensus 310 ~~h~~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~ 389 (401)
+||+.|+|+|+||+++++|||.||++|++++|+|+|| .+.|+||+++++|++++|+|+|||.. + .+|||||+|+|.
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG-~~~v~ip~g~~~G~~~rl~G~G~p~~--~-~~GDL~v~~~V~ 77 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE-SILLTVPPGSQAGQRLRIKGKGLVSK--T-HTGDLFAVIKIV 77 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSS-CEEEEECTTCCTTCEEEETTCSCBCS--S-CBCCEEEEEEEC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCC-CEEEeeCCCcCcCeEEEECCccCCCC--C-CCcCEEEEEEEE
Confidence 6899999999999999999999999999999999999 59999999999999999999999972 2 699999999999
Q ss_pred CCCCCCChhhhC
Q psy1364 390 FPKNELSEEEKE 401 (401)
Q Consensus 390 ~P~~~ls~~qk~ 401 (401)
||++ ||++||+
T Consensus 78 ~P~~-Ls~~q~~ 88 (109)
T 3i38_A 78 MPTK-PDEKARE 88 (109)
T ss_dssp CCSS-CCHHHHH
T ss_pred CCCC-CCHHHHH
Confidence 9997 9999984
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.6e-23 Score=172.99 Aligned_cols=87 Identities=33% Similarity=0.497 Sum_probs=76.8
Q ss_pred CccccCCCcEEEEEecHHHHcCCCEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECC
Q psy1364 314 RFERRGDDLYTNITISLQDALTGFKFDIDQLDGRKITVERQKI--TWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFP 391 (401)
Q Consensus 314 ~f~r~g~Dl~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~~--~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P 391 (401)
.|+|+|+||+++++|||.+|++|+++.|+|+||+.+.|+||++ +++|+++||+|+|||..+++ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4999999999999999999999999999999998899999988 99999999999999986554 68999999999999
Q ss_pred CC-CCChhhhC
Q psy1364 392 KN-ELSEEEKE 401 (401)
Q Consensus 392 ~~-~ls~~qk~ 401 (401)
++ .||++||+
T Consensus 80 ~~~~ls~~q~~ 90 (121)
T 1xao_A 80 ENHFTSEENLK 90 (121)
T ss_dssp CTTCSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 84 29999974
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.88 E-value=1.7e-23 Score=170.23 Aligned_cols=75 Identities=45% Similarity=0.832 Sum_probs=70.3
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE 162 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 162 (401)
..|||+||||+++||.+|||+|||+|+++||||+++.++.++++|++|++||++|+||.+|+.||++|++++..+
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 76 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQG 76 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhccc
Confidence 468999999999999999999999999999999998767789999999999999999999999999999887743
No 9
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.86 E-value=2e-22 Score=155.16 Aligned_cols=73 Identities=44% Similarity=0.757 Sum_probs=68.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
..|||+||||+++||.++||+|||+|++++|||++++ +.+.++|++|++||++|+||.+|+.||++|.+++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 4689999999999999999999999999999999986 668899999999999999999999999999988764
No 10
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=2.8e-22 Score=155.20 Aligned_cols=74 Identities=51% Similarity=0.833 Sum_probs=69.0
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhh
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMEC 158 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 158 (401)
.....|||+||||+++|+.+|||+|||+|+++||||++++++.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 34568999999999999999999999999999999999877788999999999999999999999999998754
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=8.2e-22 Score=155.68 Aligned_cols=76 Identities=42% Similarity=0.739 Sum_probs=70.8
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc
Q psy1364 86 SKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE 162 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 162 (401)
....|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||.+|.+++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS-HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 456899999999999999999999999999999999985 7889999999999999999999999999999887643
No 12
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=9.1e-22 Score=153.37 Aligned_cols=75 Identities=52% Similarity=0.810 Sum_probs=68.7
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHhHhhhhcchhhhhhhccccchhhh
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-DQAQAKFQELGAAYEILSDEKKRQRYDQCGMECV 159 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 159 (401)
.....|||+||||+++|+.+|||+|||+|+++||||+++.+ +.++++|++|++||++|+||.+|+.||++|.+++
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 34568999999999999999999999999999999999875 3688999999999999999999999999998654
No 13
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.1e-21 Score=151.52 Aligned_cols=72 Identities=46% Similarity=0.761 Sum_probs=67.6
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhh
Q psy1364 86 SKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMEC 158 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 158 (401)
....|||+||||+++|+.+|||+|||+|++++|||+++. +.+.++|++|++||++|+||.+|+.||++|.++
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 456899999999999999999999999999999999976 778999999999999999999999999999764
No 14
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=2.4e-21 Score=159.10 Aligned_cols=78 Identities=44% Similarity=0.687 Sum_probs=72.5
Q ss_pred CCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 84 KASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 84 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
......|||+||||+++|+.+|||+|||+|++++|||++++++.+.++|++|++||++|+||.+|+.||++|..++..
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~~ 89 (109)
T 2ctw_A 12 LSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYV 89 (109)
T ss_dssp TTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHHH
T ss_pred cCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccccc
Confidence 345678999999999999999999999999999999999887889999999999999999999999999999887653
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=2e-21 Score=154.80 Aligned_cols=77 Identities=47% Similarity=0.777 Sum_probs=70.3
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-DQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
.....|||+||||+++|+.+|||+|||+|+++||||+++.+ +.++++|++|++||++|+||.+|+.||++|.+++..
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 5 SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 34568999999999999999999999999999999999865 478899999999999999999999999999877654
No 16
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.7e-21 Score=160.86 Aligned_cols=75 Identities=32% Similarity=0.546 Sum_probs=70.4
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhh
Q psy1364 86 SKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVK 160 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 160 (401)
....|||+||||+++|+.+|||+|||+|+++||||++++++.++++|++|++||++|+||.+|+.||++|.+++.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 456899999999999999999999999999999999987778999999999999999999999999999987664
No 17
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=5e-21 Score=154.51 Aligned_cols=77 Identities=31% Similarity=0.555 Sum_probs=69.5
Q ss_pred CCCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhcccc--chhhhh
Q psy1364 84 KASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQC--GMECVK 160 (401)
Q Consensus 84 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~--g~~~~~ 160 (401)
..+...|||+||||+++|+.+|||+|||+|+++||||+++.++.+.++|++|++||++|+||.+|+.||++ +.+.+.
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e~~~ 90 (99)
T 2yua_A 12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLR 90 (99)
T ss_dssp CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHHHHH
T ss_pred CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcccccccc
Confidence 35567899999999999999999999999999999999987788999999999999999999999999984 444444
No 18
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=3.1e-21 Score=152.36 Aligned_cols=73 Identities=45% Similarity=0.733 Sum_probs=67.6
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhh
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMEC 158 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 158 (401)
.....|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||++|+||.+|..||.+|+.+
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 3457899999999999999999999999999999999986 678899999999999999999999999998753
No 19
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.83 E-value=3.5e-21 Score=146.69 Aligned_cols=69 Identities=55% Similarity=0.894 Sum_probs=62.4
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchh
Q psy1364 86 SKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGME 157 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 157 (401)
....|||+||||+++||.++||+|||+|++++|||+++++ .++|++|++||++|+||.+|+.||++|++
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 4568999999999999999999999999999999999763 57899999999999999999999999964
No 20
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.83 E-value=3.5e-21 Score=155.20 Aligned_cols=73 Identities=48% Similarity=0.814 Sum_probs=65.6
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-DQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
.|||+||||+++||.+|||+|||+|+++||||++++. +.++++|++|++||++|+||.+|+.||.+|.+++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 5899999999999999999999999999999999865 468899999999999999999999999999887754
No 21
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.82 E-value=8.7e-21 Score=151.03 Aligned_cols=74 Identities=45% Similarity=0.774 Sum_probs=68.1
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc
Q psy1364 86 SKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE 162 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 162 (401)
.+..|||+||||+++|+.+|||+|||+|+++||||+++.+ .++|++|++||++|+||.+|+.||++|.+++..+
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 4568999999999999999999999999999999999764 4689999999999999999999999999988753
No 22
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=3.2e-20 Score=148.33 Aligned_cols=72 Identities=31% Similarity=0.592 Sum_probs=65.7
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc------hHHHHHHHHHhHhhhhcchhhhhhhccccch
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND------DQAQAKFQELGAAYEILSDEKKRQRYDQCGM 156 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 156 (401)
.+...|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||.+..
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 45678999999999999999999999999999999998743 5688999999999999999999999998653
No 23
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.77 E-value=9.4e-20 Score=149.66 Aligned_cols=72 Identities=38% Similarity=0.593 Sum_probs=66.5
Q ss_pred CCccCcccccCCCCCC-CHHHHHHHHHHHHHhhCCCCCCC---chHHHHHHHHHhHhhhhcchhhhhhhccccchh
Q psy1364 86 SKERDLYEVLGVPRNA-DSNKIKSAYRALAKKMHPDKNPN---DDQAQAKFQELGAAYEILSDEKKRQRYDQCGME 157 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~a-s~~eIk~ayr~l~~~~HPDk~~~---~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 157 (401)
....|||+||||+++| |.+|||+|||+|++++|||++++ .+.+.++|++|++||++|+||.+|+.||++|..
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 3468999999999999 99999999999999999999976 356889999999999999999999999998864
No 24
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.76 E-value=1.7e-19 Score=164.64 Aligned_cols=73 Identities=41% Similarity=0.807 Sum_probs=69.4
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhc
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKK 161 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~ 161 (401)
.|||+||||+++||.+|||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|++++..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999877889999999999999999999999999999987764
No 25
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=8.4e-19 Score=138.87 Aligned_cols=62 Identities=29% Similarity=0.450 Sum_probs=58.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhh
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQR 150 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~ 150 (401)
..|||+||||+++|+.+|||+|||+|+++||||++++ +.+.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999986 6788999999999999999999875
No 26
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.73 E-value=2.7e-18 Score=149.79 Aligned_cols=73 Identities=32% Similarity=0.563 Sum_probs=65.8
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCch------HHHHHHHHHhHhhhhcchhhhhhhccccchh
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDD------QAQAKFQELGAAYEILSDEKKRQRYDQCGME 157 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~------~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 157 (401)
.+...|||+||||+++|+.++||+|||+|++++|||+++.+. .|.++|++|++||++|+||.+|+.||.++..
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 345689999999999999999999999999999999997652 4778999999999999999999999987653
No 27
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.73 E-value=1.6e-18 Score=133.80 Aligned_cols=67 Identities=28% Similarity=0.446 Sum_probs=60.2
Q ss_pred CccCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhh
Q psy1364 87 KERDLYEVLGVPRN--ADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMEC 158 (401)
Q Consensus 87 ~~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 158 (401)
...++|+||||+++ ||.++||+|||+|+++||||++++ .++|++|++||++|+|+.+|.. |.||.++
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 34689999999999 999999999999999999999865 5789999999999999999988 5577654
No 28
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.72 E-value=6.3e-19 Score=145.21 Aligned_cols=65 Identities=26% Similarity=0.440 Sum_probs=61.0
Q ss_pred ccCcccccCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccch
Q psy1364 88 ERDLYEVLGVPRNADS--NKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGM 156 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 156 (401)
..++|+||||+++|+. ++||+|||+|++++|||++++ .++|++|++||++|+||.+|+.||.||.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999999 999999999999999999976 4789999999999999999999999875
No 29
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.71 E-value=2e-18 Score=135.69 Aligned_cols=67 Identities=25% Similarity=0.313 Sum_probs=60.5
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-hHHHHHHHHHhHhhhhcchhhhhhhc
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND-DQAQAKFQELGAAYEILSDEKKRQRY 151 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~y 151 (401)
.....++|+||||+++||.+|||+|||+|+++||||+++++ +.|+++|++|++||++|+|...|..+
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 45678999999999999999999999999999999999876 45899999999999999998877443
No 30
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.71 E-value=9.6e-19 Score=153.86 Aligned_cols=66 Identities=26% Similarity=0.428 Sum_probs=58.8
Q ss_pred CccCcccccCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccch
Q psy1364 87 KERDLYEVLGVPRNAD--SNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGM 156 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 156 (401)
...|+|+||||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||+||.
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 3578999999999999 6999999999999999999976 3689999999999999999999999996
No 31
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.67 E-value=2.5e-17 Score=146.12 Aligned_cols=67 Identities=27% Similarity=0.527 Sum_probs=61.3
Q ss_pred ccCcccccCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCchH-----HHHHHHHHhHhhhhcchhhhhhhcccc
Q psy1364 88 ERDLYEVLGVPRNAD--SNKIKSAYRALAKKMHPDKNPNDDQ-----AQAKFQELGAAYEILSDEKKRQRYDQC 154 (401)
Q Consensus 88 ~~~~y~iLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 154 (401)
..|||+||||+++++ .++||+|||+|+++||||++++.+. |.++|+.|++||++|+||.+|+.||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 579999999999998 9999999999999999999986543 678999999999999999999999974
No 32
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.66 E-value=1.8e-17 Score=130.77 Aligned_cols=56 Identities=21% Similarity=0.373 Sum_probs=51.9
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCch---HHHHHHHHHhHhhhhcch
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDD---QAQAKFQELGAAYEILSD 144 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~~L~d 144 (401)
.++|++|||+++||.+|||+|||++|++|||||+++++ .|+++|++|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999998754 488999999999999975
No 33
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.66 E-value=2.9e-17 Score=145.26 Aligned_cols=64 Identities=22% Similarity=0.417 Sum_probs=59.5
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchH---HHHHHHHHhHhhhhcchhhhhhhc
Q psy1364 88 ERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQ---AQAKFQELGAAYEILSDEKKRQRY 151 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~y 151 (401)
..|+|++|||+++|+.+|||+|||+|+++|||||+++.+. |+++|++|++||++|+||.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 4689999999999999999999999999999999976542 889999999999999999999987
No 34
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.65 E-value=4.6e-17 Score=143.93 Aligned_cols=66 Identities=21% Similarity=0.408 Sum_probs=60.8
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCch-----HHHHHHHHHhHhhhhcchhhhhhhccccc
Q psy1364 90 DLYEVLGVPRNA--DSNKIKSAYRALAKKMHPDKNPNDD-----QAQAKFQELGAAYEILSDEKKRQRYDQCG 155 (401)
Q Consensus 90 ~~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g 155 (401)
|||++|||++++ |.++||+|||+|+++||||++++.+ .|.++|+.|++||++|+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 9999999999999999999998653 35689999999999999999999999863
No 35
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.63 E-value=1.3e-16 Score=145.03 Aligned_cols=68 Identities=22% Similarity=0.370 Sum_probs=61.1
Q ss_pred CCccCcccccCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCch-----HHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 86 SKERDLYEVLGVPRN--ADSNKIKSAYRALAKKMHPDKNPNDD-----QAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 86 ~~~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
....|||+||||+++ ++.++||+|||+|+++||||++++++ .|.++|++|++||++|+||.+|+.||.
T Consensus 40 ~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 40 DPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp CTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 346899999999986 79999999999999999999997642 366889999999999999999999995
No 36
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=9.7e-17 Score=121.19 Aligned_cols=60 Identities=17% Similarity=0.271 Sum_probs=53.8
Q ss_pred CCCccCcccccCCCC-CCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhh
Q psy1364 85 ASKERDLYEVLGVPR-NADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKR 148 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r 148 (401)
.+...++|+||||++ +||.+|||+|||+|+++||||++++ .++|++|++||++|+|+..|
T Consensus 10 ~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 10 KMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp SCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred CCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence 455679999999999 7999999999999999999999754 46899999999999998765
No 37
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.62 E-value=8.3e-17 Score=174.00 Aligned_cols=78 Identities=38% Similarity=0.775 Sum_probs=40.9
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccchhhhhcc
Q psy1364 85 ASKERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCGMECVKKE 162 (401)
Q Consensus 85 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~ 162 (401)
.....|||+||||+++||.+|||+|||+|+++||||++++++.|.++|++|++||++|+||.+|+.||+||++++...
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 445789999999999999999999999999999999998778899999999999999999999999999999888654
No 38
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.60 E-value=1.3e-16 Score=129.80 Aligned_cols=59 Identities=19% Similarity=0.253 Sum_probs=52.5
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCC---ch----HHHHHHHHHhHhhhhcchhh
Q psy1364 87 KERDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPN---DD----QAQAKFQELGAAYEILSDEK 146 (401)
Q Consensus 87 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~~----~a~~~f~~i~~Ay~~L~d~~ 146 (401)
...|||+|||++. ||.+|||+|||+|+++|||||+++ ++ .|+++|++|++||++|+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3579999999996 999999999999999999999863 11 47899999999999999985
No 39
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.57 E-value=5.6e-16 Score=137.97 Aligned_cols=67 Identities=25% Similarity=0.454 Sum_probs=60.3
Q ss_pred CCccCccccc------CCCC-CCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccccc
Q psy1364 86 SKERDLYEVL------GVPR-NADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQCG 155 (401)
Q Consensus 86 ~~~~~~y~iL------gv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g 155 (401)
....|||+|| |+++ +||.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||...
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3467999999 4665 9999999999999999999999975 6788999999999999999999999844
No 40
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.96 E-value=3.1e-10 Score=83.35 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=47.4
Q ss_pred ccCcccccCCCCC---CCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchh
Q psy1364 88 ERDLYEVLGVPRN---ADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDE 145 (401)
Q Consensus 88 ~~~~y~iLgv~~~---as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~ 145 (401)
..+.|.||||+++ ++.++|++|||+|+..+|||+..+ .....+|++|++.|...
T Consensus 3 ~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 3 LDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 3467899999999 999999999999999999999876 45678899999999754
No 41
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.95 E-value=4e-10 Score=111.37 Aligned_cols=65 Identities=46% Similarity=0.775 Sum_probs=56.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc---hHHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 89 RDLYEVLGVPRNADSNKIKSAYRALAKKMHPDKNPND---DQAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 89 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
.++|.+||+.++++.++|+++|+++++++|||+.+.+ ..++++|++|++||++|+||++|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999999874 3488999999999999999999999996
No 42
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.93 E-value=2.1e-09 Score=87.58 Aligned_cols=75 Identities=23% Similarity=0.264 Sum_probs=62.4
Q ss_pred ccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEE
Q psy1364 193 ARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHL 272 (401)
Q Consensus 193 ~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l 272 (401)
+.|.|+.+++.|||.||+.|++++|..- .. .+
T Consensus 9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl-----------------------------------------------dG-~~ 40 (109)
T 3i38_A 9 IVGHNLEIVLPLAPWEAALGAKVTVPTL-----------------------------------------------KE-SI 40 (109)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS-----------------------------------------------SS-CE
T ss_pred EECCEEEEEEEcCHHHHhCCCEEEEEcC-----------------------------------------------CC-CE
Confidence 5789999999999999999998766410 11 47
Q ss_pred EEEEcccccCCCEEeeCCCCCCCCCCCCccEEEEEEEeCCCCcc
Q psy1364 273 EVEIEMGMKDGQQTKFTAEGEPHIDGEPGDLIFHIRTLPHPRFE 316 (401)
Q Consensus 273 ~V~Ip~Gv~~G~~i~~~g~G~~~~~g~~GDL~v~i~v~~h~~f~ 316 (401)
+|.||+|+++|++++++|+|.+.. +.+|||||+++|.-.....
T Consensus 41 ~v~ip~g~~~G~~~rl~G~G~p~~-~~~GDL~v~~~V~~P~~Ls 83 (109)
T 3i38_A 41 LLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAVIKIVMPTKPD 83 (109)
T ss_dssp EEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEEEEECCCSSCC
T ss_pred EEeeCCCcCcCeEEEECCccCCCC-CCCcCEEEEEEEECCCCCC
Confidence 899999999999999999999874 4789999999998655443
No 43
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.88 E-value=2.2e-09 Score=89.16 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=60.2
Q ss_pred ccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEEE
Q psy1364 193 ARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHHL 272 (401)
Q Consensus 193 ~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~l 272 (401)
++|.|+.+++.|||.||+.|++++|.- ...+.+
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~t-----------------------------------------------ldG~~~ 36 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEH-----------------------------------------------VSGDWL 36 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEEC-----------------------------------------------TTSCEE
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEec-----------------------------------------------CCCCEE
Confidence 568999999999999999999877641 123468
Q ss_pred EEEEccc--ccCCCEEeeCCCCCCCCCC-CCccEEEEEEEeCCCC
Q psy1364 273 EVEIEMG--MKDGQQTKFTAEGEPHIDG-EPGDLIFHIRTLPHPR 314 (401)
Q Consensus 273 ~V~Ip~G--v~~G~~i~~~g~G~~~~~g-~~GDL~v~i~v~~h~~ 314 (401)
+|.|||| +++|++++++|+|.+..++ ..|||||+++|.-...
T Consensus 37 ~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~ 81 (121)
T 1xao_A 37 KVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPEN 81 (121)
T ss_dssp EEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCT
T ss_pred EEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCC
Confidence 9999999 9999999999999986654 6899999999996654
No 44
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.76 E-value=1.5e-08 Score=89.27 Aligned_cols=71 Identities=20% Similarity=0.266 Sum_probs=60.2
Q ss_pred CCcEEEEEecHHHHcCCCEEEEecC----CC----cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEEEECC
Q psy1364 320 DDLYTNITISLQDALTGFKFDIDQL----DG----RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFDVEFP 391 (401)
Q Consensus 320 ~Dl~~~~~I~l~eAl~G~~~~i~tl----dG----~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~v~~P 391 (401)
.|+.+++.|||.||+.|++++|... .| ++++|.||+|+.+|++++++|+|-+.. .++..|||||.+++. |
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~gg~~GDl~v~i~v~-~ 78 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNP-QTGRRKTLQFVIQEK-S 78 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCS-SSSCBCEEEEEEEEC-C
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCC-CCCccccEEEEEEEc-c
Confidence 3899999999999999999888643 23 679999999999999999999998643 344689999999997 5
Q ss_pred C
Q psy1364 392 K 392 (401)
Q Consensus 392 ~ 392 (401)
.
T Consensus 79 h 79 (170)
T 1c3g_A 79 H 79 (170)
T ss_dssp C
T ss_pred C
Confidence 4
No 45
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.73 E-value=1.7e-08 Score=89.73 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=60.8
Q ss_pred CCCcEEEEEecHHHHcCCCEEEEecC-----------CCcEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEE
Q psy1364 319 GDDLYTNITISLQDALTGFKFDIDQL-----------DGRKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFD 387 (401)
Q Consensus 319 g~Dl~~~~~I~l~eAl~G~~~~i~tl-----------dG~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~ 387 (401)
|.|+.+++.|||.||+.|++++|... ..+.++|.||+|+.+|++++++|+|-+.. .++..|||||.++
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~-~gg~~GDl~v~i~ 81 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQES-PGTSPGDLVLIIQ 81 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSS-TTSCCCEEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCC-CCCccccEEEEEE
Confidence 78999999999999999999887643 23579999999999999999999998732 2346899999999
Q ss_pred EECCCC
Q psy1364 388 VEFPKN 393 (401)
Q Consensus 388 v~~P~~ 393 (401)
+. |..
T Consensus 82 ~~-~h~ 86 (180)
T 2q2g_A 82 TK-THP 86 (180)
T ss_dssp EC-CCS
T ss_pred EE-ecc
Confidence 97 543
No 46
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.66 E-value=4.7e-08 Score=86.86 Aligned_cols=72 Identities=22% Similarity=0.329 Sum_probs=57.9
Q ss_pred CCCcEEEEEecHHHHcCCCEEEEecC------CC-------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEE
Q psy1364 319 GDDLYTNITISLQDALTGFKFDIDQL------DG-------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYIT 385 (401)
Q Consensus 319 g~Dl~~~~~I~l~eAl~G~~~~i~tl------dG-------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~ 385 (401)
|.|+.+++.|||.||+.|++++|... .| ++++|.||+|+.+|++++++|+|-+.. ++..|||||.
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~--~g~~GDl~v~ 79 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS--NNIPADIVFV 79 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS--SSCCCCEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC--CCCcccEEEE
Confidence 57999999999999999999777532 34 468999999999999999999998854 2468999999
Q ss_pred EEEECCCC
Q psy1364 386 FDVEFPKN 393 (401)
Q Consensus 386 ~~v~~P~~ 393 (401)
+++. |..
T Consensus 80 i~~~-~h~ 86 (181)
T 3agx_A 80 LKDK-PHN 86 (181)
T ss_dssp EEEC-CCS
T ss_pred EEEe-ccc
Confidence 9997 543
No 47
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.64 E-value=2.3e-08 Score=96.93 Aligned_cols=74 Identities=26% Similarity=0.428 Sum_probs=60.0
Q ss_pred ccCCCcEEEEEecHHHHcCCCEEEEecC------CC-------cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEE
Q psy1364 317 RRGDDLYTNITISLQDALTGFKFDIDQL------DG-------RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLY 383 (401)
Q Consensus 317 r~g~Dl~~~~~I~l~eAl~G~~~~i~tl------dG-------~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~ 383 (401)
++|.||.+++.|+|.||+.|+++.|... .| ++++|+||+|+++|++||++|+|.|... ++..||||
T Consensus 138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~-gg~~GDL~ 216 (329)
T 3lz8_A 138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGEN-GGPNGDLW 216 (329)
T ss_dssp CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEE
T ss_pred CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCC-CCCCCcEE
Confidence 5688999999999999999988666543 22 3688999999999999999999998642 34689999
Q ss_pred EEEEEECCC
Q psy1364 384 ITFDVEFPK 392 (401)
Q Consensus 384 i~~~v~~P~ 392 (401)
|+|+|. |.
T Consensus 217 v~I~v~-~h 224 (329)
T 3lz8_A 217 LVIHIA-PH 224 (329)
T ss_dssp EEECCC-CC
T ss_pred EEEEEe-cC
Confidence 999987 44
No 48
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.59 E-value=3.7e-09 Score=85.47 Aligned_cols=79 Identities=16% Similarity=0.168 Sum_probs=54.1
Q ss_pred CcceeecccccHHHHhcCceEEEEeccccccCC-CC--------Ccc---cccccceEEEEecCceeEEEE---------
Q psy1364 195 GANIDIDLYVTLEELYNGNFVEVTRNKPVMKPA-LG--------TRK---CNCRQEMQTRQLGPGRFQMMQ--------- 253 (401)
Q Consensus 195 g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~-~~--------~~~---C~c~~~~~~~~~g~g~~~~~~--------- 253 (401)
|.|+.++|.|||||||+|.+++|.+.+.+.|+. .| ... |++.|.+...+ | .|++.+
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~-G--~~~~~~~C~~C~G~G 77 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT-G--PFVMRSTCRRCGGRG 77 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE-T--TEEEEEECSSSSSSS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe-C--CEEEEEECCcCCCcc
Confidence 468899999999999999999999999988762 11 123 44445443332 3 344322
Q ss_pred ---eecCCCCCCceeeceeEEEEEEE
Q psy1364 254 ---QTVCDECPNVRFKNEEHHLEVEI 276 (401)
Q Consensus 254 ---~~~C~~C~G~g~v~~~~~l~V~I 276 (401)
..+|+.|+|.|++.++++|+|+|
T Consensus 78 ~~i~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 78 SIIISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp EECSSCCSSSSSCSEECCCCSSCCSC
T ss_pred eECCCcCCCCCCeeEEEEEEEEEEEc
Confidence 23677788888888777777654
No 49
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=98.39 E-value=3.2e-07 Score=85.57 Aligned_cols=76 Identities=17% Similarity=0.205 Sum_probs=62.7
Q ss_pred cccCcceeecccccHHHHhcCceEEEEeccccccCCCCCcccccccceEEEEecCceeEEEEeecCCCCCCceeeceeEE
Q psy1364 192 VARGANIDIDLYVTLEELYNGNFVEVTRNKPVMKPALGTRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKNEEHH 271 (401)
Q Consensus 192 ~~~g~di~~~l~vtlee~~~G~~~~v~~~~~~~~~~~~~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~~~~~ 271 (401)
.+.|.|+.++++|||.||+.|.+++|.- ...+.
T Consensus 158 ~R~G~DL~~~~~Isl~eAllG~~i~v~t-----------------------------------------------ldG~~ 190 (248)
T 1nlt_A 158 KRDGDDLVYEAEIDLLTAIAGGEFALEH-----------------------------------------------VSGDW 190 (248)
T ss_dssp EEETTEEEEEEEEEHHHHHHCBCCEEEC-----------------------------------------------SSSCE
T ss_pred eeeCCEEEEEEEeCHHHHhcCCEEEEeC-----------------------------------------------CCCCE
Confidence 4679999999999999999999877641 12346
Q ss_pred EEEEEccc--ccCCCEEeeCCCCCCCCCC-CCccEEEEEEEeCCCC
Q psy1364 272 LEVEIEMG--MKDGQQTKFTAEGEPHIDG-EPGDLIFHIRTLPHPR 314 (401)
Q Consensus 272 l~V~Ip~G--v~~G~~i~~~g~G~~~~~g-~~GDL~v~i~v~~h~~ 314 (401)
++|.|||| +++|++++++|+|.+..+. ..|||||+++|.-...
T Consensus 191 ~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~ 236 (248)
T 1nlt_A 191 LKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPEN 236 (248)
T ss_dssp EECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-
T ss_pred EEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCC
Confidence 88999999 9999999999999986543 5799999999985543
No 50
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=88.47 E-value=0.16 Score=37.75 Aligned_cols=51 Identities=24% Similarity=0.289 Sum_probs=27.0
Q ss_pred CceEEEEeccccccCC---CC---------CcccccccceEEEEecCceeEEEEeecCCCCCCceeec
Q psy1364 212 GNFVEVTRNKPVMKPA---LG---------TRKCNCRQEMQTRQLGPGRFQMMQQTVCDECPNVRFKN 267 (401)
Q Consensus 212 G~~~~v~~~~~~~~~~---~~---------~~~C~c~~~~~~~~~g~g~~~~~~~~~C~~C~G~g~v~ 267 (401)
|.+++|.+.+.+.|+. .+ +..|++.|.+...+ |+++ .+.+|+.|+|.|.+.
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~--~~~~C~~C~G~G~~~ 63 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ---GFFA--VQQTCPHCQGRGTLI 63 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE---TTEE--EEEECTTTTTSSEEC
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc---CCCE--EeeECcCCCCccEEC
Confidence 3445566666666541 11 12345555544333 4443 345788888887653
No 51
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=85.97 E-value=0.37 Score=50.56 Aligned_cols=46 Identities=15% Similarity=0.338 Sum_probs=36.0
Q ss_pred ccCcccccCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhh
Q psy1364 88 ERDLYEVLGVPRNADS--NKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEI 141 (401)
Q Consensus 88 ~~~~y~iLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~ 141 (401)
..|||.+||++.+... .+|++|||+||+..+++ .+++..+..|+.|
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 4569999999777666 77999999999965444 3678888888765
No 52
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=68.42 E-value=2.1 Score=29.41 Aligned_cols=15 Identities=13% Similarity=0.266 Sum_probs=12.3
Q ss_pred ecCCCCCCceeecee
Q psy1364 255 TVCDECPNVRFKNEE 269 (401)
Q Consensus 255 ~~C~~C~G~g~v~~~ 269 (401)
.+|+.|+|.|++.+.
T Consensus 24 ~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 24 EPCPKCLGKGVILTA 38 (53)
T ss_dssp EECTTTTTSSEEECH
T ss_pred CcCCCCCCcEEEEEE
Confidence 679999999987654
No 53
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=53.82 E-value=5.4 Score=27.27 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=11.3
Q ss_pred ecCCCCCCceeece
Q psy1364 255 TVCDECPNVRFKNE 268 (401)
Q Consensus 255 ~~C~~C~G~g~v~~ 268 (401)
.+|+.|+|.|.+..
T Consensus 24 ~~C~~C~G~G~v~~ 37 (53)
T 2bx9_A 24 TPCPACSGKGVILT 37 (53)
T ss_dssp EECTTTTTSSEEEC
T ss_pred CCCccCCCCccEEE
Confidence 57999999987654
No 54
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=51.42 E-value=24 Score=25.95 Aligned_cols=54 Identities=13% Similarity=0.302 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHhHhhhhcch-hhhhhhccccch
Q psy1364 102 DSNKIKSAYRALAKKMHPDKNPND--DQAQAKFQELGAAYEILSD-EKKRQRYDQCGM 156 (401)
Q Consensus 102 s~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d-~~~r~~yd~~g~ 156 (401)
-..-++.+|+.+.+...|...... ..+..+|..-. +|..+.+ .+++.+|+.|-.
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~ 63 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMH 63 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHH
Confidence 456688999999998888777654 45666666554 8999966 578888988854
No 55
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.51 E-value=1.8 Score=33.91 Aligned_cols=25 Identities=12% Similarity=0.284 Sum_probs=21.4
Q ss_pred CCCcEEEEEecHHHHcCCCEEEEec
Q psy1364 319 GDDLYTNITISLQDALTGFKFDIDQ 343 (401)
Q Consensus 319 g~Dl~~~~~I~l~eAl~G~~~~i~t 343 (401)
|.|+.+++.|+|.||+.|.+++|..
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~ 25 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTV 25 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEe
Confidence 5789999999999999999876643
No 56
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=33.17 E-value=1.7 Score=45.50 Aligned_cols=28 Identities=4% Similarity=-0.398 Sum_probs=24.3
Q ss_pred eecccccHHHHhcCceEEEEeccccccC
Q psy1364 199 DIDLYVTLEELYNGNFVEVTRNKPVMKP 226 (401)
Q Consensus 199 ~~~l~vtlee~~~G~~~~v~~~~~~~~~ 226 (401)
.+++.++|+|++.|.++++.+.+...|.
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~ 195 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCN 195 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHH
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCC
Confidence 4678999999999999999998887763
No 57
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=28.25 E-value=79 Score=21.96 Aligned_cols=49 Identities=14% Similarity=0.217 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHH---hHhhhhcch-hh-hhhhccccc
Q psy1364 104 NKIKSAYRALAKKMHPDKNPNDDQAQAKFQEL---GAAYEILSD-EK-KRQRYDQCG 155 (401)
Q Consensus 104 ~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i---~~Ay~~L~d-~~-~r~~yd~~g 155 (401)
+|..+||.+|.+...=|..=+ -++..+.| .--|.+|.| |. +++.|+.|-
T Consensus 3 eEae~aF~~lL~~~~V~s~ws---weqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWS---FSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCC---HHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCc---HHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 578899999999876665533 23445555 457999997 55 677888764
No 58
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=28.08 E-value=1.2e+02 Score=21.65 Aligned_cols=56 Identities=20% Similarity=0.270 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcch-hhhhhhccccch
Q psy1364 100 NADSNKIKSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSD-EKKRQRYDQCGM 156 (401)
Q Consensus 100 ~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d-~~~r~~yd~~g~ 156 (401)
-+|.+|.+++|++|...++-+-.-.=+.+.+++. =..-|.+|.+ .+++..|+.|-.
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~~tWe~~~~~i~-~DpRY~al~~~~eRk~~F~ey~~ 67 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSNASWEQAMKMII-NDPRYSALAKLSEKKQAFNAYKV 67 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTTCCHHHHHHHHH-TSGGGGGCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHc-cCccccccCCHHHHHHHHHHHHH
Confidence 5689999999999999886444322122222111 1336788876 566777776643
No 59
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=26.07 E-value=1.1e+02 Score=24.68 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=32.0
Q ss_pred EEEEcCCCCCCCcEEEEcCCCCCCCCC--------CCCCccEEEEEEEECCCC
Q psy1364 349 ITVERQKITWPGARIRKKNEGMPSYEN--------NNAKGVLYITFDVEFPKN 393 (401)
Q Consensus 349 l~v~i~~~~~~g~~~~l~g~G~p~~~~--------~~~~GdL~i~~~v~~P~~ 393 (401)
..-.||.+.++|+.++|.|.=.+..+. .....|+-++|++.|.++
T Consensus 8 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~~ 60 (138)
T 3zxf_A 8 HKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTS 60 (138)
T ss_dssp EEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTTT
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCCC
Confidence 345688899999999998864433221 113469999999998763
No 60
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=23.60 E-value=2.3e+02 Score=21.58 Aligned_cols=67 Identities=15% Similarity=0.143 Sum_probs=45.8
Q ss_pred ccCCCcEEEEEe--cHHHHcCCCEEEEecCCC-cEEEEEcCCCCCCCcEEEEcCCCCCCCCCCCCCccEEEEEE
Q psy1364 317 RRGDDLYTNITI--SLQDALTGFKFDIDQLDG-RKITVERQKITWPGARIRKKNEGMPSYENNNAKGVLYITFD 387 (401)
Q Consensus 317 r~g~Dl~~~~~I--~l~eAl~G~~~~i~tldG-~~l~v~i~~~~~~g~~~~l~g~G~p~~~~~~~~GdL~i~~~ 387 (401)
..|.++.+++.. +|.++|.+|.+.|+...= +...+.++. +.||+..++.-+=.|...+ .--|++.|.
T Consensus 17 ~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~-v~pg~~~~~~~~~~P~~~G---~~~L~a~f~ 86 (102)
T 2xzz_A 17 VVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILNVGD-IGGNETVTLRQSFVPVRPG---PRQLIASLD 86 (102)
T ss_dssp CSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEEEECC-BCTTCEEEEEEEECCCSCS---SCCCEEEEE
T ss_pred ccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEEEcCc-CCCCCEEEEEEEEecCccc---ceEEEEEEE
Confidence 346666666555 899999999999987521 125666644 8899999988877775432 245666654
No 61
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=22.21 E-value=1.2e+02 Score=20.83 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=31.2
Q ss_pred HHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 107 KSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 107 k~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
.+.+|...+.-||+... .+..+.|.+.|..|++.++....+.
T Consensus 14 ~~~~r~~~~~~~p~~~~-----~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLHN-----AELSKMLGKSWKALTLAEKRPFVEE 55 (71)
T ss_dssp HHHHHHHHHTTCTTSCH-----HHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCH-----HHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 45677777888998762 4667889999999998877655443
No 62
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=20.86 E-value=1.3e+02 Score=21.21 Aligned_cols=42 Identities=14% Similarity=0.253 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhCCCCCCCchHHHHHHHHHhHhhhhcchhhhhhhccc
Q psy1364 107 KSAYRALAKKMHPDKNPNDDQAQAKFQELGAAYEILSDEKKRQRYDQ 153 (401)
Q Consensus 107 k~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 153 (401)
.+.+|...+.-||+.... +..+.|.+.|..|++.++....+.
T Consensus 16 ~~~~r~~~~~~~p~~~~~-----eisk~lg~~Wk~ls~~eK~~y~~~ 57 (76)
T 1hry_A 16 SRDQRRKMALENPRMRNS-----EISKQLGYQWKMLTEAEKWPFFQE 57 (76)
T ss_dssp HHHHHHHHHHHCSCCSSS-----HHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCHH-----HHHHHHHhHHHhCCHHHHHHHHHH
Confidence 345666667779987643 456789999999998776554443
Done!