Query psy13644
Match_columns 270
No_of_seqs 39 out of 41
Neff 2.6
Searched_HMMs 13730
Date Fri Aug 16 16:34:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13644.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/13644hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jnda2 d.26.3.1 (A:279-370) I 0.5 1.5E+03 0.11 15.0 0.7 9 1-9 38-46 (92)
2 d1q2ha_ a.34.4.1 (A:) Adapter 0.4 2.1E+03 0.15 13.8 1.1 8 2-9 2-9 (63)
3 d1y6ia2 a.261.1.1 (A:83-233) M 0.3 3.1E+03 0.23 14.4 1.2 11 3-13 23-33 (151)
4 d2v9va1 a.4.5.35 (A:377-437) C 0.3 3.1E+03 0.23 12.6 0.9 8 2-9 19-26 (61)
5 d1vf8a2 d.26.3.1 (A:246-315) C 0.2 3.5E+03 0.25 11.6 1.0 8 2-9 36-43 (70)
6 d1z3xa2 a.261.1.1 (A:88-235) G 0.2 3.6E+03 0.26 13.9 1.2 12 3-14 23-34 (148)
7 d1rw6a_ a.47.4.1 (A:) CAPPD, a 0.2 3.8E+03 0.27 14.6 1.1 8 3-10 40-47 (192)
8 d2pi6a2 d.26.3.1 (A:240-307) S 0.2 3.5E+03 0.25 11.5 0.5 11 1-11 34-44 (68)
9 d2ev0a2 a.76.1.1 (A:63-136) Ma 0.2 5E+03 0.37 10.8 1.4 10 1-10 27-36 (74)
10 d2isya2 a.76.1.1 (A:65-140) Ir 0.2 5.2E+03 0.38 10.8 1.4 10 1-10 28-37 (76)
No 1
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=0.47 E-value=1.5e+03 Score=15.00 Aligned_cols=9 Identities=33% Similarity=1.021 Sum_probs=4.9
Q ss_pred CchHHHHHH
Q psy13644 1 MAWEEICRQ 9 (270)
Q Consensus 1 ~aw~e~~~~ 9 (270)
|+|-|||..
T Consensus 38 lsy~EIC~~ 46 (92)
T d1jnda2 38 LSYAEICGK 46 (92)
T ss_dssp EEHHHHHHH
T ss_pred EEHHHHHHH
Confidence 455666643
No 2
>d1q2ha_ a.34.4.1 (A:) Adapter protein APS, dimerisation domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=0.41 E-value=2.1e+03 Score=13.76 Aligned_cols=8 Identities=25% Similarity=1.136 Sum_probs=4.2
Q ss_pred chHHHHHH
Q psy13644 2 AWEEICRQ 9 (270)
Q Consensus 2 aw~e~~~~ 9 (270)
.|.|-|..
T Consensus 2 ~W~EFCE~ 9 (63)
T d1q2ha_ 2 DWRQFCEL 9 (63)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 36665543
No 3
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=0.27 E-value=3.1e+03 Score=14.41 Aligned_cols=11 Identities=18% Similarity=0.326 Sum_probs=5.9
Q ss_pred hHHHHHHHHHH
Q psy13644 3 WEEICRQTKEE 13 (270)
Q Consensus 3 w~e~~~~ak~e 13 (270)
|.+||..|-.=
T Consensus 23 W~eAD~eT~~l 33 (151)
T d1y6ia2 23 FETADEITRDK 33 (151)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55666555443
No 4
>d2v9va1 a.4.5.35 (A:377-437) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=0.25 E-value=3.1e+03 Score=12.58 Aligned_cols=8 Identities=25% Similarity=0.842 Sum_probs=3.9
Q ss_pred chHHHHHH
Q psy13644 2 AWEEICRQ 9 (270)
Q Consensus 2 aw~e~~~~ 9 (270)
.|+++.-+
T Consensus 19 dwqeaatr 26 (61)
T d2v9va1 19 DWQEAATR 26 (61)
T ss_dssp EHHHHHHH
T ss_pred cHHHHHHH
Confidence 35555433
No 5
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=0.24 E-value=3.5e+03 Score=11.58 Aligned_cols=8 Identities=38% Similarity=0.800 Sum_probs=3.9
Q ss_pred chHHHHHH
Q psy13644 2 AWEEICRQ 9 (270)
Q Consensus 2 aw~e~~~~ 9 (270)
+.-|||..
T Consensus 36 ~y~EIc~~ 43 (70)
T d1vf8a2 36 AYYEVCTF 43 (70)
T ss_dssp EHHHHHHH
T ss_pred eHHHHHHH
Confidence 34455543
No 6
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=0.24 E-value=3.6e+03 Score=13.86 Aligned_cols=12 Identities=25% Similarity=0.407 Sum_probs=6.6
Q ss_pred hHHHHHHHHHHH
Q psy13644 3 WEEICRQTKEEI 14 (270)
Q Consensus 3 w~e~~~~ak~e~ 14 (270)
|.+|+..|-.=.
T Consensus 23 W~eAD~eT~~lm 34 (148)
T d1z3xa2 23 FEAADRLTTQKL 34 (148)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666555443
No 7
>d1rw6a_ a.47.4.1 (A:) CAPPD, an extracellular domain of amyloid beta A4 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=0.21 E-value=3.8e+03 Score=14.57 Aligned_cols=8 Identities=63% Similarity=1.066 Sum_probs=4.1
Q ss_pred hHHHHHHH
Q psy13644 3 WEEICRQT 10 (270)
Q Consensus 3 w~e~~~~a 10 (270)
|.+++.+.
T Consensus 40 W~eaE~~~ 47 (192)
T d1rw6a_ 40 WEEAERQA 47 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 8
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]}
Probab=0.19 E-value=3.5e+03 Score=11.54 Aligned_cols=11 Identities=36% Similarity=0.670 Sum_probs=0.0
Q ss_pred CchHHHHHHHH
Q psy13644 1 MAWEEICRQTK 11 (270)
Q Consensus 1 ~aw~e~~~~ak 11 (270)
|+.-|||...+
T Consensus 34 lay~EIc~~~~ 44 (68)
T d2pi6a2 34 LAYYEICDFLH 44 (68)
T ss_dssp EEHHHHHHHTT
T ss_pred EEHHHHHHHHh
No 9
>d2ev0a2 a.76.1.1 (A:63-136) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=0.18 E-value=5e+03 Score=10.79 Aligned_cols=10 Identities=20% Similarity=0.219 Sum_probs=0.0
Q ss_pred CchHHHHHHH
Q psy13644 1 MAWEEICRQT 10 (270)
Q Consensus 1 ~aw~e~~~~a 10 (270)
+.|..++..|
T Consensus 27 ~~~~~a~~~A 36 (74)
T d2ev0a2 27 VDEEKIYNDV 36 (74)
T ss_dssp CCHHHHHHHH
T ss_pred CChhHHHHHH
No 10
>d2isya2 a.76.1.1 (A:65-140) Iron-dependent regulator {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=0.17 E-value=5.2e+03 Score=10.77 Aligned_cols=10 Identities=30% Similarity=0.933 Sum_probs=0.0
Q ss_pred CchHHHHHHH
Q psy13644 1 MAWEEICRQT 10 (270)
Q Consensus 1 ~aw~e~~~~a 10 (270)
+.|..++..|
T Consensus 28 v~~~~a~~~A 37 (76)
T d2isya2 28 LPWEEVHAEA 37 (76)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Done!