BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1365
(140 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|110671476|gb|ABG81989.1| putative ribosomal protein S18 [Diaphorina citri]
Length = 153
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/140 (98%), Positives = 138/140 (98%), Gaps = 2/140 (1%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR
Sbjct: 16 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ LTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQ--LTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 134 GQHTKTTGRRGRTVGVSKKK 153
>gi|332373488|gb|AEE61885.1| unknown [Dendroctonus ponderosae]
Length = 152
Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/140 (88%), Positives = 134/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TNIDGKRKVMFALTAIKG GRR+SNIVLKKAD+DLNKRAGECSEEEV+KIITIM+NPR
Sbjct: 16 LGTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLNKRAGECSEEEVEKIITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLREDLER+KKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQL---TSSSLDSKLREDLERMKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|112984000|ref|NP_001037269.1| ribosomal protein S18 [Bombyx mori]
gi|49532882|dbj|BAD26676.1| Ribosomal protein S18 [Plutella xylostella]
gi|54609321|gb|AAV34876.1| ribosomal protein S18 [Bombyx mori]
gi|342356373|gb|AEL28845.1| ribosomal protein S18 [Heliconius melpomene cythera]
Length = 152
Score = 257 bits (657), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 124/140 (88%), Positives = 135/140 (96%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKVMFA+TAIKG GRR+SNIVLKKADIDL+KRAGEC+EEEV+KIITIM+NPR
Sbjct: 16 MNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLREDLERLKKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQL---TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|54039447|sp|Q962R1.1|RS18_SPOFR RecName: Full=40S ribosomal protein S18
gi|15213824|gb|AAK92187.1|AF400215_1 ribosomal protein S18 [Spodoptera frugiperda]
gi|48958395|dbj|BAD23920.1| ribosomal protein S18 [Antheraea yamamai]
gi|268306384|gb|ACY95313.1| ribosomal protein S18 [Manduca sexta]
gi|315115383|gb|ADT80664.1| ribosomal protein S18 [Euphydryas aurinia]
Length = 152
Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/140 (87%), Positives = 135/140 (96%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKVMFA+TAIKG GRR+SNIVLKKADIDL+KRAGEC+EEEV+KI+TIM+NPR
Sbjct: 16 MNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLREDLERLKKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQL---TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|389608227|dbj|BAM17725.1| ribosomal protein S18 [Papilio xuthus]
gi|389610859|dbj|BAM19040.1| ribosomal protein S18 [Papilio polytes]
Length = 152
Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/140 (87%), Positives = 135/140 (96%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKVMFA+TAIKG GRR+SNIVLKKADIDL+KRAGEC+EEEV+KI+TIM+NPR
Sbjct: 16 MNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLR+DLERLKKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQL---TSSNLDSKLRDDLERLKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|70909571|emb|CAJ17207.1| ribosomal protein S18e [Curculio glandium]
Length = 152
Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 122/140 (87%), Positives = 134/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TNIDGKRKVMFALTAIKG GRR+SNIVLKKAD+DL+KRAGECSEEEV+KIITIM+NPR
Sbjct: 16 LGTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSEEEVEKIITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKY+Q+ +++ LDSKLREDLER+KKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYNQL---TSSSLDSKLREDLERMKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|242019380|ref|XP_002430139.1| ribosomal protein S18, putative [Pediculus humanus corporis]
gi|212515230|gb|EEB17401.1| ribosomal protein S18, putative [Pediculus humanus corporis]
Length = 137
Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/140 (90%), Positives = 134/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKVMFA+T+IKG GRRF+NIVLKKADIDL+KRAGECSEEEVDKIIT++TNPR
Sbjct: 1 MNTNIDGKRKVMFAMTSIKGVGRRFANIVLKKADIDLDKRAGECSEEEVDKIITVLTNPR 60
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ LTST LDSKLREDLERLKKI+AHRGMRHYWGLRVR
Sbjct: 61 QYKIPDWFLNRQKDIQDGKYSQ--LTST-NLDSKLREDLERLKKIKAHRGMRHYWGLRVR 117
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 118 GQHTKTTGRRGRTVGVSKKK 137
>gi|357625987|gb|EHJ76244.1| 40S ribosomal protein S18 [Danaus plexippus]
Length = 137
Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/140 (87%), Positives = 135/140 (96%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKVMFA+TAIKG GRR+SNIVLKKADIDL+KRAGEC+EEEV+KI+TIM++PR
Sbjct: 1 MNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSHPR 60
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLREDLERLKKIRAHRGMRHYWGLRVR
Sbjct: 61 QYKIPDWFLNRQKDIVDGKYSQL---TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVR 117
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 118 GQHTKTTGRRGRTVGVSKKK 137
>gi|50344500|emb|CAH04336.1| S18e ribosomal protein [Cicindela campestris]
Length = 152
Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 121/140 (86%), Positives = 134/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TNIDGKRKVMFA+TAIKG GRR++NIVLKKAD+DL+KRAGECSEEEV+KIITIM+NPR
Sbjct: 16 LGTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLREDLER+KKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQL---TSSNLDSKLREDLERMKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|388523605|gb|AFK49801.1| ribosomal protein S18 [Cryptocercus punctulatus]
Length = 152
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/140 (87%), Positives = 134/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M TNIDGKRKVMFA+TAIKG GRR++NIVLKKADIDL+KRAGEC++EEV+KIITIM+NPR
Sbjct: 16 MGTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECTDEEVEKIITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLREDLERLKKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQL---TSSYLDSKLREDLERLKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|307165872|gb|EFN60227.1| 40S ribosomal protein S18 [Camponotus floridanus]
Length = 152
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/140 (86%), Positives = 132/140 (94%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M TNIDG RKVMFA+TAIKG GRR++NIVLKKADIDL+KRAGECSEEEV+KI+TIM NPR
Sbjct: 16 MGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ ++A LDSKLREDLER+KKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQL---TSANLDSKLREDLERMKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|307195851|gb|EFN77647.1| 40S ribosomal protein S18 [Harpegnathos saltator]
gi|307195853|gb|EFN77649.1| 40S ribosomal protein S18 [Harpegnathos saltator]
gi|307195858|gb|EFN77654.1| 40S ribosomal protein S18 [Harpegnathos saltator]
gi|332020747|gb|EGI61151.1| 40S ribosomal protein S18 [Acromyrmex echinatior]
Length = 137
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/140 (86%), Positives = 132/140 (94%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M TNIDG RKVMFA+TAIKG GRR++NIVLKKADIDL+KRAGECSEEEV+KI+TIM NPR
Sbjct: 1 MGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPR 60
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ ++A LDSKLREDLER+KKIRAHRG+RHYWGLRVR
Sbjct: 61 QYKIPDWFLNRQKDIVDGKYSQL---TSANLDSKLREDLERMKKIRAHRGLRHYWGLRVR 117
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 118 GQHTKTTGRRGRTVGVSKKK 137
>gi|91083227|ref|XP_973632.1| PREDICTED: similar to ribosomal protein S18e [Tribolium castaneum]
gi|270007711|gb|EFA04159.1| hypothetical protein TcasGA2_TC014405 [Tribolium castaneum]
Length = 152
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/140 (85%), Positives = 135/140 (96%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGKRKVMFALTAIKG GRR+SNIVLKKAD+DL+KRAGECS+EEV+KI+TIM+NPR
Sbjct: 16 LNTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSDEEVEKIVTIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKY+Q+ +++ LDSKLREDLER+KKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYNQL---TSSTLDSKLREDLERMKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|50344504|emb|CAH04338.1| S18e ribosomal protein [Timarcha balearica]
Length = 152
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/140 (85%), Positives = 134/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TNIDGKRKVMFALTAIKG GRR+SN+VLKKAD+DL+KRAGECSEEEV+KIITIM+NPR
Sbjct: 16 LGTNIDGKRKVMFALTAIKGVGRRYSNLVLKKADVDLDKRAGECSEEEVEKIITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI+DGKY+Q+ +++ LDSKLREDLER+KKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIIDGKYNQL---TSSTLDSKLREDLERMKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|187119176|ref|NP_001119689.1| ribosomal protein S18 [Acyrthosiphon pisum]
gi|89473736|gb|ABD72680.1| putative ribosomal protein S18 [Acyrthosiphon pisum]
gi|239788236|dbj|BAH70806.1| ACYPI000081 [Acyrthosiphon pisum]
gi|326493984|dbj|BAJ85454.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522712|dbj|BAJ88402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/140 (85%), Positives = 134/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+STNIDGKRKVMFA+TAIKG GRRFSNIVLKKAD+DLNKRAGEC++EEV+KIITIM NPR
Sbjct: 16 LSTNIDGKRKVMFAMTAIKGIGRRFSNIVLKKADVDLNKRAGECTDEEVEKIITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+VDGK+SQ+ +++ LDSKLREDLERLKKI+AHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVVDGKFSQL---TSSTLDSKLREDLERLKKIKAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|264667373|gb|ACY71272.1| ribosomal protein S18 [Chrysomela tremula]
Length = 152
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/140 (85%), Positives = 133/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TNIDGKRKVMFALTAIKG GRR++NIVLKKAD+DL+KRAGECS+EEV+KIITIM NPR
Sbjct: 16 LGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSDEEVEKIITIMANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI+DGKYSQ+ +++ LDSKLREDLER+KKIRAHRGMRHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIIDGKYSQL---TSSSLDSKLREDLERMKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|121512018|gb|ABM55460.1| ribosomal protein S18 [Xenopsylla cheopis]
Length = 152
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/140 (84%), Positives = 134/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
MSTNIDGKRKVMFA+TAIKG GRR++NIVLKKAD+DLNKRAGEC+EEEV+KI+TIM+ PR
Sbjct: 16 MSTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLNKRAGECTEEEVEKIVTIMSTPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKDIVDG+YSQ+ +++ LDSKLREDLER+KKI+AHRGMRHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDIVDGRYSQL---TSSSLDSKLREDLERMKKIKAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|66548968|ref|XP_625104.1| PREDICTED: 40S ribosomal protein S18 [Apis mellifera]
gi|340724920|ref|XP_003400826.1| PREDICTED: 40S ribosomal protein S18-like [Bombus terrestris]
gi|350422055|ref|XP_003493042.1| PREDICTED: 40S ribosomal protein S18-like [Bombus impatiens]
gi|380027615|ref|XP_003697517.1| PREDICTED: 40S ribosomal protein S18-like [Apis florea]
gi|383854706|ref|XP_003702861.1| PREDICTED: 40S ribosomal protein S18-like [Megachile rotundata]
Length = 152
Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/140 (85%), Positives = 132/140 (94%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M TNIDG RKVMFA+TAIKG GRR++NIVLKKADIDL+KRAGECSEEEV+KI+TIM NPR
Sbjct: 16 MGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLREDLER+KKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQL---TSSYLDSKLREDLERMKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|50344502|emb|CAH04337.1| S18e ribosomal protein [Dascillus cervinus]
Length = 152
Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/140 (86%), Positives = 133/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M TNIDGKRKVMFALTAIKG GRR++NIVLKKAD+DL+KRAGECSEEEV+KIITIM+NPR
Sbjct: 16 MGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLREDL R+KKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIVDGKYSQL---TSSYLDSKLREDLGRMKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|401828844|gb|AFQ22730.1| ribosomal protein S18, partial [Phaedon cochleariae]
Length = 151
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/140 (85%), Positives = 134/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TNIDGKRKVMFALTAIKG GRR++NIVLKKAD++L+KRAGECS+EEV+KIITIM+NPR
Sbjct: 15 LGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVNLDKRAGECSDEEVEKIITIMSNPR 74
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI+DGKYSQ+ +++ LDSKLREDLER+KKIRAHRGMRHYWGLRVR
Sbjct: 75 QYKIPDWFLNRQKDIIDGKYSQL---TSSSLDSKLREDLERMKKIRAHRGMRHYWGLRVR 131
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 132 GQHTKTTGRRGRTVGVSKKK 151
>gi|156542046|ref|XP_001601390.1| PREDICTED: 40S ribosomal protein S18-like [Nasonia vitripennis]
Length = 165
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/140 (85%), Positives = 132/140 (94%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TNIDG RKVMFA+TAIKG GRR++NIVLKKADIDL+KRAGECSEEEV+KI+TIM NPR
Sbjct: 29 VGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPR 88
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDIVDGKYSQ+ +++ LDSKLREDLER+KKIRAHRG+RHYWGLRVR
Sbjct: 89 QYKIPDWFLNRQKDIVDGKYSQL---TSSNLDSKLREDLERMKKIRAHRGLRHYWGLRVR 145
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 146 GQHTKTTGRRGRTVGVSKKK 165
>gi|70909575|emb|CAJ17208.1| ribosomal protein S18e [Sphaerius sp. APV-2005]
Length = 152
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/140 (85%), Positives = 132/140 (94%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNI+G RKVMFALTAIKG GRR+SNIVLKKAD+DL+KRAGECSEEEV+KI+TIM PR
Sbjct: 16 MNTNIEGNRKVMFALTAIKGIGRRYSNIVLKKADVDLDKRAGECSEEEVEKIVTIMQVPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKDIVDGKYSQ+ ++A LDSKLREDLER+KKIRAHRGMRHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDIVDGKYSQL---TSANLDSKLREDLERMKKIRAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|121544007|gb|ABM55667.1| putative ribosomal protein S18 [Maconellicoccus hirsutus]
Length = 152
Score = 248 bits (633), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 118/140 (84%), Positives = 133/140 (95%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGK K+MFALTAIKG GRRFSN+VLKKAD+DL+KRAGECS+EEV+KIITIMTNPR
Sbjct: 16 MNTNIDGKIKIMFALTAIKGIGRRFSNVVLKKADVDLDKRAGECSDEEVEKIITIMTNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKDIVDGKY Q+ +++ LDSK+REDLERLKKI+AHRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDIVDGKYLQL---ASSNLDSKIREDLERLKKIKAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|346469929|gb|AEO34809.1| hypothetical protein [Amblyomma maculatum]
Length = 153
Score = 244 bits (623), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 120/140 (85%), Positives = 132/140 (94%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKVMFALTAIKG GRRFSNIV KKAD+DLNKRAGE SEEEV+K+ITIM+NPR
Sbjct: 16 LNTNIDGRRKVMFALTAIKGVGRRFSNIVCKKADVDLNKRAGELSEEEVEKLITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ+ TS A L++KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKYSQV--TSNA-LENKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|149286992|gb|ABR23395.1| ribosomal protein S18 [Ornithodoros parkeri]
Length = 153
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/140 (85%), Positives = 132/140 (94%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKVMFALTAIKG GRRFSN+V KKAD+DLNKRAGE SEEEV+K+ITIM+NPR
Sbjct: 16 LNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELSEEEVEKLITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ+ TS A L++KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKYSQV--TSNA-LENKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|318086970|gb|ADV40077.1| ribosomal protein S18 [Latrodectus hesperus]
Length = 153
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/140 (83%), Positives = 131/140 (93%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RKVMFALTAIKG GRRFSN+V KKAD+DLNKRAGE SEEEV+K+ITIM+NPR
Sbjct: 16 MNTNIDGRRKVMFALTAIKGVGRRFSNLVCKKADVDLNKRAGELSEEEVEKLITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ+ ++ L++KLREDLERLKKIRAH+G+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKYSQV---TSNGLENKLREDLERLKKIRAHKGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|389032445|gb|AFK82359.1| ribosomal protein S18, partial [Ctenocephalides felis]
Length = 134
Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/135 (83%), Positives = 129/135 (95%), Gaps = 3/135 (2%)
Query: 6 DGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIP 65
DGKRKVMFA+TAIKG GRR++NIVLKKAD+DLNKRAGEC+EEEV+KI+TIM+ PRQ+KIP
Sbjct: 3 DGKRKVMFAMTAIKGVGRRYANIVLKKADVDLNKRAGECTEEEVEKIVTIMSTPRQFKIP 62
Query: 66 DWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTK 125
DWFLNRQKDIVDG+YSQ+ +++ LDSKLREDLER+KKI+AHRGMRHYWGLRVRGQHTK
Sbjct: 63 DWFLNRQKDIVDGRYSQL---TSSNLDSKLREDLERMKKIKAHRGMRHYWGLRVRGQHTK 119
Query: 126 TTGRRGRTVGVSKKK 140
TTGRRGRTVGVSKKK
Sbjct: 120 TTGRRGRTVGVSKKK 134
>gi|328899750|gb|AEB54647.1| ribosomal protein S18 [Procambarus clarkii]
Length = 152
Score = 241 bits (616), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 114/140 (81%), Positives = 131/140 (93%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RKVMFA+TAIKG GRR+SNIVLKKADID +KRAGE +EEEV+KI+TIM+NPR
Sbjct: 16 MNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ++ + L++KLREDLER+KKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKYSQVM---SNNLETKLREDLERMKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|195057283|ref|XP_001995231.1| GH23036 [Drosophila grimshawi]
gi|193899437|gb|EDV98303.1| GH23036 [Drosophila grimshawi]
Length = 162
Score = 241 bits (616), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 131/140 (93%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
MSTNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP
Sbjct: 26 MSTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPL 85
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P+WFLNRQKDI+DGKYSQ+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 86 QYKVPNWFLNRQKDIIDGKYSQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 142
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 143 GQHTKTTGRRGRTVGVSKKK 162
>gi|12232348|gb|AAG47944.1| ribosomal protein S18 [Cherax destructor]
Length = 142
Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/140 (81%), Positives = 131/140 (93%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RKVMFA+TAIKG GRR+SNIVLKKADID +KRAGE +EEEV+KI+TIM+NPR
Sbjct: 6 MNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIMSNPR 65
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ++ + L++KLREDLER+KKIRAHRG+RH+WGLRVR
Sbjct: 66 QYKIPDWFLNRQKDIKDGKYSQVM---SNNLETKLREDLERMKKIRAHRGLRHFWGLRVR 122
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 123 GQHTKTTGRRGRTVGVSKKK 142
>gi|195431724|ref|XP_002063878.1| ribosomal protein S18 [Drosophila willistoni]
gi|194159963|gb|EDW74864.1| ribosomal protein S18 [Drosophila willistoni]
Length = 152
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 131/140 (93%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI+TNP
Sbjct: 16 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIITNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P+WFLNRQKDI+DGKYSQ+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 76 QYKVPNWFLNRQKDIIDGKYSQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|67083901|gb|AAY66885.1| ribosomal protein S18, partial [Ixodes scapularis]
Length = 153
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/140 (83%), Positives = 132/140 (94%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKVMFALTAIKG GRRFSN+V KKAD+DLNKRAGE +EEEV+K+ITIM+NPR
Sbjct: 16 LNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGK+SQ+ TS A L++KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKFSQV--TSNA-LENKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|260829983|ref|XP_002609941.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae]
gi|41018059|sp|Q8ISP0.1|RS18_BRABE RecName: Full=40S ribosomal protein S18
gi|24266988|gb|AAN52390.1| ribosomal protein S18 [Branchiostoma belcheri]
gi|229295303|gb|EEN65951.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae]
Length = 152
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/140 (82%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RK+MFALT+IKG GRR+SNIV KKADIDL+KRAGE S+EEV+++ITIM NPR
Sbjct: 16 MNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ++ S LD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVMANS---LDNKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|33521690|gb|AAQ21388.1| ribosomal protein S18 [Ixodes ricinus]
Length = 152
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/140 (83%), Positives = 132/140 (94%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKVMFALTAIKG GRRFSN+V KKAD+DLNKRAGE +EEEV+K+ITIM+NPR
Sbjct: 16 LNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGK+SQ+ TS A L++KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKFSQV--TSNA-LENKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|195124097|ref|XP_002006530.1| GI21106 [Drosophila mojavensis]
gi|193911598|gb|EDW10465.1| GI21106 [Drosophila mojavensis]
Length = 158
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 131/140 (93%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP
Sbjct: 22 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPL 81
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P+WFLNRQKDI+DGKYSQ+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 82 QYKVPNWFLNRQKDIIDGKYSQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 138
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 139 GQHTKTTGRRGRTVGVSKKK 158
>gi|195380645|ref|XP_002049081.1| ribosomal protein S18 [Drosophila virilis]
gi|194143878|gb|EDW60274.1| ribosomal protein S18 [Drosophila virilis]
Length = 152
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 131/140 (93%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP
Sbjct: 16 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P+WFLNRQKDI+DGKYSQ+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 76 QYKVPNWFLNRQKDIIDGKYSQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|157124077|ref|XP_001660320.1| 40S ribosomal protein S18 [Aedes aegypti]
gi|94468520|gb|ABF18109.1| ribosomal protein S18 [Aedes aegypti]
gi|108874121|gb|EAT38346.1| AAEL009747-PA [Aedes aegypti]
Length = 152
Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+STNIDGKR V ALTAIKG GRR++++VLKKAD+D KRAGECSEEEV+KI+TI++NPR
Sbjct: 16 LSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSEEEVEKIVTIISNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI+DGKYSQ+ +++ +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIIDGKYSQL---TSSNVDSKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|263173239|gb|ACY69887.1| S18e ribosomal protein [Cimex lectularius]
Length = 131
Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 127/134 (94%), Gaps = 3/134 (2%)
Query: 7 GKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPD 66
GKRKVMFA+TAIKG GRR++NIVLKKAD+DL+KRAGECSEEEV+KI+TIM NPRQYKIPD
Sbjct: 1 GKRKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKILTIMQNPRQYKIPD 60
Query: 67 WFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKT 126
WFLNRQKDIV+GKY Q+ ++A LD+KLR+DLERLKKIRAHRGMRHYWGLRVRGQHTKT
Sbjct: 61 WFLNRQKDIVEGKYFQL---TSASLDAKLRDDLERLKKIRAHRGMRHYWGLRVRGQHTKT 117
Query: 127 TGRRGRTVGVSKKK 140
TGRRGRTVGVSKKK
Sbjct: 118 TGRRGRTVGVSKKK 131
>gi|157690762|tpe|CAL69108.1| TPA: putative 40S ribosomal protein S18 [Spadella cephaloptera]
Length = 154
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RK+MFA+T+IKGCGRRFSNIV KKAD+D+ KRAGE S+EEV++++TIM NPR
Sbjct: 16 MNTNIDGRRKIMFAMTSIKGCGRRFSNIVCKKADVDMTKRAGELSDEEVERVVTIMNNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L + LD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVL---SNGLDNKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG TVGVSKKK
Sbjct: 133 GQHTKTTGRRGCTVGVSKKK 152
>gi|391333432|ref|XP_003741117.1| PREDICTED: 40S ribosomal protein S18-like [Metaseiulus
occidentalis]
Length = 153
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ KVM+ALT+IKG GRRF+NIV KKAD+DLNKRAGE SE+EV+ I+TI+ NPR
Sbjct: 16 LNTNIDGQTKVMYALTSIKGVGRRFANIVCKKADVDLNKRAGELSEQEVNAIVTILANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI+DGKYSQ++ ++ LD+KLREDLERLKKI+AHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIIDGKYSQVV---SSTLDTKLREDLERLKKIKAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|188572482|gb|ACD65147.1| putative 40S ribosomal protein RPS18 [Phoronis muelleri]
Length = 152
Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRK+MFA+TAIKG GRR++++VLKKAD+DL KRAGE SEEEV+++ITIM+NPR
Sbjct: 16 MNTNIDGKRKIMFAMTAIKGIGRRYAHVVLKKADVDLAKRAGELSEEEVERVITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGK SQ++ + LD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKTSQVM---SNGLDNKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|126697458|gb|ABO26686.1| 40S ribosomal protein S18 [Haliotis discus discus]
gi|363894932|gb|AEW42983.1| putative 40S ribosomal protein S18 [Haliotis diversicolor]
Length = 154
Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+ K+MFALTAIKG GRRFSN+VLKKA+IDL KRAGE S+EEVD++IT+MTNPR
Sbjct: 18 MNTNIDGRTKIMFALTAIKGMGRRFSNVVLKKANIDLTKRAGELSDEEVDRVITVMTNPR 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGK++Q+L LD+KLREDLERLKKIR HRG+RHYWGLRVR
Sbjct: 78 QYKIPDWFLNRQKDVKDGKFNQVL---ANMLDNKLREDLERLKKIRNHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGV+KKK
Sbjct: 135 GQHTKTTGRRGRTVGVAKKK 154
>gi|125809258|ref|XP_001361051.1| GA21399 [Drosophila pseudoobscura pseudoobscura]
gi|195154539|ref|XP_002018179.1| GL16906 [Drosophila persimilis]
gi|54636224|gb|EAL25627.1| GA21399 [Drosophila pseudoobscura pseudoobscura]
gi|194113975|gb|EDW36018.1| GL16906 [Drosophila persimilis]
Length = 152
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI+TNP
Sbjct: 16 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIITNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P+WFLNRQKDI+DGKY Q+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 76 QYKVPNWFLNRQKDIIDGKYWQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|348545240|ref|XP_003460088.1| PREDICTED: 40S ribosomal protein S18-like [Oreochromis niloticus]
Length = 152
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/140 (78%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDLNKRAGE +EEEV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEEEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L S LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANS---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|194753476|ref|XP_001959038.1| ribosomal protein S18 [Drosophila ananassae]
gi|190620336|gb|EDV35860.1| ribosomal protein S18 [Drosophila ananassae]
Length = 152
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP
Sbjct: 16 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P+WFLNRQKDIVDGKY Q+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 76 QYKVPNWFLNRQKDIVDGKYWQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|170056800|ref|XP_001864194.1| 30S ribosomal protein S13P [Culex quinquefasciatus]
gi|167876481|gb|EDS39864.1| 30S ribosomal protein S13P [Culex quinquefasciatus]
Length = 152
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+STNIDGKR V ALTAIKG GRR++++VLKKAD+D KRAGECS+EEV+KI+TI++NPR
Sbjct: 16 LSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIVTIISNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI+DGKYSQ+ +++ +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIIDGKYSQL---TSSNVDSKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|321458683|gb|EFX69747.1| hypothetical protein DAPPUDRAFT_300691 [Daphnia pulex]
Length = 152
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGK K+MFA+T+IKG GRR++N+VLKKADIDL KRAGE SEEEV+K+ITIM NPR
Sbjct: 16 LNTNIDGKIKIMFAVTSIKGVGRRYANVVLKKADIDLTKRAGELSEEEVEKLITIMANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGK+SQ+ ++ L++KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKFSQV---TSNMLENKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|211938661|gb|ACJ13227.1| FI09342p [Drosophila melanogaster]
Length = 170
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP
Sbjct: 34 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPL 93
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P+WFLNRQKDI+DGKY Q+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 94 QYKVPNWFLNRQKDIIDGKYWQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 150
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 151 GQHTKTTGRRGRTVGVSKKK 170
>gi|21392218|gb|AAM48463.1| RH43343p [Drosophila melanogaster]
Length = 152
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP
Sbjct: 16 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P+WFLNRQKDI+DGKY Q+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 76 QYKVPNWFLNRQKDIIDGKYWQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|17136882|ref|NP_476964.1| ribosomal protein S18, isoform A [Drosophila melanogaster]
gi|24656100|ref|NP_725943.1| ribosomal protein S18, isoform B [Drosophila melanogaster]
gi|194881531|ref|XP_001974884.1| ribosomal protein S18 [Drosophila erecta]
gi|195336052|ref|XP_002034661.1| ribosomal protein S18 [Drosophila sechellia]
gi|195486935|ref|XP_002091713.1| ribosomal protein S18 [Drosophila yakuba]
gi|195585039|ref|XP_002082302.1| ribosomal protein S18 [Drosophila simulans]
gi|730637|sp|P41094.1|RS18_DROME RecName: Full=40S ribosomal protein S18
gi|349256|gb|AAA28870.1| ribosomal protein S18 [Drosophila melanogaster]
gi|7302403|gb|AAF57491.1| ribosomal protein S18, isoform A [Drosophila melanogaster]
gi|21626903|gb|AAM68401.1| ribosomal protein S18, isoform B [Drosophila melanogaster]
gi|38047723|gb|AAR09764.1| similar to Drosophila melanogaster RpS18, partial [Drosophila
yakuba]
gi|38048391|gb|AAR10098.1| similar to Drosophila melanogaster RpS18, partial [Drosophila
yakuba]
gi|56201301|dbj|BAD72904.1| RpS18 [Drosophila simulans]
gi|56201321|dbj|BAD72922.1| RpS18 [Drosophila sechellia]
gi|90855595|gb|ABE01159.1| IP16603p [Drosophila melanogaster]
gi|190658071|gb|EDV55284.1| ribosomal protein S18 [Drosophila erecta]
gi|194126631|gb|EDW48674.1| ribosomal protein S18 [Drosophila sechellia]
gi|194177814|gb|EDW91425.1| ribosomal protein S18 [Drosophila yakuba]
gi|194194311|gb|EDX07887.1| ribosomal protein S18 [Drosophila simulans]
Length = 152
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP
Sbjct: 16 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P+WFLNRQKDI+DGKY Q+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 76 QYKVPNWFLNRQKDIIDGKYWQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|71040621|dbj|BAE16014.1| ribosomal protein S18 [Crassostrea gigas]
Length = 152
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/140 (78%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+MFA+TAIKG GRR++N+V KKAD+D+ KRAGE SEEE+DKI+TIM NPR
Sbjct: 16 LNTNIDGRRKIMFAMTAIKGIGRRYANVVCKKADVDITKRAGELSEEEIDKIVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGK+SQ++ + LD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKFSQVMSNT---LDNKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGV+KKK
Sbjct: 133 GQHTKTTGRRGRTVGVAKKK 152
>gi|432881047|ref|XP_004073779.1| PREDICTED: 40S ribosomal protein S18-like [Oryzias latipes]
Length = 152
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDLNKRAGE +EEEV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEEEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|41018060|sp|Q8IT98.1|RS18_AEQIR RecName: Full=40S ribosomal protein S18
gi|22758908|gb|AAN05613.1| ribosomal protein S18 [Argopecten irradians]
Length = 152
Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRK+MFA+TAIKG GRR++N+V KKAD+D+ KRAGE SE+E++++ITIM+NPR
Sbjct: 16 MNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELSEDEIERVITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKD+ DGKYSQ++ + LD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDVKDGKYSQVM---SNALDNKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGV+KKK
Sbjct: 133 GQHTKTTGRRGRTVGVAKKK 152
>gi|61654738|gb|AAX48895.1| S18 [Suberites domuncula]
Length = 152
Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG +K+MF LTAIKG GRR++N+VLKKAD+D+NKRAGE SEEE++++ITIM NPR
Sbjct: 16 LNTNIDGHQKIMFGLTAIKGVGRRYANLVLKKADVDMNKRAGELSEEEIERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD DGKYSQIL QL+ KLREDLERLKKIRAHRG+RHYWG+RVR
Sbjct: 76 QYKIPDWFLNRQKDHRDGKYSQIL---ANQLEHKLREDLERLKKIRAHRGLRHYWGVRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|443689582|gb|ELT91955.1| hypothetical protein CAPTEDRAFT_228718 [Capitella teleta]
Length = 152
Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RK+ +ALTAIKG GRR+S++V KKAD+DL KRAGE SEEEV+K+ITIM+NPR
Sbjct: 16 MNTNIDGQRKIAYALTAIKGIGRRYSHVVCKKADVDLTKRAGELSEEEVEKVITIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ++ LDSK+R+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVMANI---LDSKIRDDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|328767380|gb|EGF77430.1| hypothetical protein BATDEDRAFT_91663 [Batrachochytrium
dendrobatidis JAM81]
Length = 165
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGKRK+M+ALT+IKG GRR++N+VLKKADIDLNKRAGE + +E+++++TIM NPR
Sbjct: 28 LNTNIDGKRKIMYALTSIKGIGRRYANLVLKKADIDLNKRAGEVTNDELERVVTIMQNPR 87
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKY+Q++ + LD+KLREDLERLKKIRAHRG+RHYWG+RVR
Sbjct: 88 QYKIPDWFLNRQKDIKDGKYTQVIANA---LDNKLREDLERLKKIRAHRGLRHYWGVRVR 144
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 145 GQHTKTTGRRGRTVGVSKKK 164
>gi|225710398|gb|ACO11045.1| 40S ribosomal protein S18 [Caligus rogercresseyi]
Length = 152
Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG R +MFA+TAIKG GRR++N+VLKKADIDL+KRAGE SE+EV+KIITIM NPR
Sbjct: 16 MNTNIDGMRNIMFAMTAIKGIGRRYANLVLKKADIDLHKRAGELSEDEVEKIITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI +GK SQ++ + LD+KLREDLERLKKIRAHRG+RHYWG+RVR
Sbjct: 76 QYKIPDWFLNRQKDIKEGKTSQVM---SNALDNKLREDLERLKKIRAHRGLRHYWGVRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|28626512|ref|NP_775341.1| 40S ribosomal protein S18 [Danio rerio]
gi|41018061|sp|Q8JGS9.1|RS18_DANRE RecName: Full=40S ribosomal protein S18
gi|20977555|gb|AAM28205.1| 40S ribosomal protein S18 [Danio rerio]
gi|38566120|gb|AAH62289.1| Ribosomal protein S18 [Danio rerio]
gi|126632524|emb|CAM56557.1| ribosomal protein S18 [Danio rerio]
Length = 152
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDLNKRAGE +E+EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|37779106|gb|AAP20213.1| 40S ribosomal protein S18 [Pagrus major]
Length = 140
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDLNKRAGE ++EEV++++TIM NPR
Sbjct: 4 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERVVTIMQNPR 63
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 64 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 120
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 121 GQHTKTTGRRGRTVGVSKKK 140
>gi|410911538|ref|XP_003969247.1| PREDICTED: 40S ribosomal protein S18-like [Takifugu rubripes]
gi|60417186|emb|CAH57704.1| 40S ribosomal protein S18 [Platichthys flesus]
gi|116488056|gb|ABJ98610.1| 40S ribosomal protein S18 [Scophthalmus maximus]
gi|124300823|dbj|BAF45907.1| ribosomal protein S18 [Solea senegalensis]
Length = 152
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +EEEV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|195998744|ref|XP_002109240.1| ribosomal protein S18 [Trichoplax adhaerens]
gi|190587364|gb|EDV27406.1| ribosomal protein S18 [Trichoplax adhaerens]
Length = 153
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M TNIDG+ K+MFALTAIKGCGRRF+NIV KKA +D++KRAGE +E+E+DK+ITIM NPR
Sbjct: 17 MGTNIDGRVKIMFALTAIKGCGRRFANIVCKKAGVDIDKRAGELTEDEIDKVITIMQNPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGK+SQ+L + L++KLREDLERLKK+RAHRG+RHYWGLRVR
Sbjct: 77 QYKIPDWFLNRQKDIKDGKFSQVL---SNNLETKLREDLERLKKVRAHRGIRHYWGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGV+KKK
Sbjct: 134 GQHTKTTGRKGRTVGVAKKK 153
>gi|225714468|gb|ACO13080.1| 40S ribosomal protein S18 [Lepeophtheirus salmonis]
Length = 152
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+R +MFA+TAIKG GRR++NIVLKKADIDL KRAGE SE+EV+KI+TIM NPR
Sbjct: 16 LNTNIDGRRNIMFAMTAIKGIGRRYANIVLKKADIDLYKRAGELSEDEVEKIVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI +GK SQ++ S LD KLREDLERLKKIRAHRG+RHYWG+RVR
Sbjct: 76 QYKIPDWFLNRQKDIKEGKTSQVMSNS---LDIKLREDLERLKKIRAHRGLRHYWGVRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|431916876|gb|ELK16636.1| 40S ribosomal protein S18 [Pteropus alecto]
Length = 164
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 28 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 87
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 88 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 144
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 145 GQHTKTTGRRGRTVGVSKKK 164
>gi|158289973|ref|XP_311570.4| AGAP010375-PA [Anopheles gambiae str. PEST]
gi|157018416|gb|EAA07206.5| AGAP010375-PA [Anopheles gambiae str. PEST]
Length = 152
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+STNIDGKR V ALTAIKG GRR++++VLKKAD+D KRAGECS+EEV+KIITI++NPR
Sbjct: 16 LSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITIISNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPDWFLNRQKDIVDGKY Q+ +++ +DSKLREDLERLK+I AHRGMRHYWGLRVR
Sbjct: 76 HYKIPDWFLNRQKDIVDGKYMQL---TSSNIDSKLREDLERLKRIHAHRGMRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|387914516|gb|AFK10867.1| ribosomal protein S18 [Callorhinchus milii]
Length = 152
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE S++EV++IITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELSDDEVERIITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|221122256|ref|XP_002155929.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Hydra
magnipapillata]
gi|221122258|ref|XP_002155978.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Hydra
magnipapillata]
Length = 155
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/140 (78%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGK K+M+A+T+IKG GRRFSNI LKKADIDL KRAGE ++EEV+++ITIM NPR
Sbjct: 16 MNTNIDGKTKIMYAMTSIKGVGRRFSNICLKKADIDLKKRAGELTDEEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPD+FLNRQKDI DGKY+Q+L + LD+KLREDLERLKKI+AHRG+RHYWGLRVR
Sbjct: 76 QYKIPDYFLNRQKDIKDGKYTQVLANA---LDNKLREDLERLKKIKAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGVSKKK
Sbjct: 133 GQHTKTTGRKGRTVGVSKKK 152
>gi|229367816|gb|ACQ58888.1| 40S ribosomal protein S18 [Anoplopoma fimbria]
gi|334362406|gb|AEG78402.1| 40S ribosomal protein S18 [Epinephelus coioides]
gi|335955196|gb|AEH76604.1| ribosomal protein S18b [Epinephelus bruneus]
Length = 152
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDLNKRAGE +++EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|332245592|ref|XP_003271942.1| PREDICTED: 40S ribosomal protein S18 isoform 1 [Nomascus
leucogenys]
Length = 175
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 39 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 98
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 99 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 155
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 156 GQHTKTTGRRGRTVGVSKKK 175
>gi|159145688|gb|ABW90381.1| putative ribosomal protein S18 [Sipunculus nudus]
Length = 152
Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRK+ FA+TAIKG GRR++ IV KKAD+D+ KRAGE S++EV+K+IT+M+NPR
Sbjct: 16 MNTNIDGKRKIAFAMTAIKGVGRRYATIVCKKADVDVTKRAGELSDDEVEKLITVMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKD+ DGK+SQ++ + QLD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDVKDGKFSQVM---SNQLDNKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|318190651|ref|NP_001187081.1| 40S ribosomal protein S18 [Ictalurus punctatus]
gi|41018101|sp|Q90YQ5.1|RS18_ICTPU RecName: Full=40S ribosomal protein S18
gi|15294049|gb|AAK95201.1|AF402827_1 40S ribosomal protein S18 [Ictalurus punctatus]
Length = 152
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +E+EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|6755368|ref|NP_035426.1| 40S ribosomal protein S18 [Mus musculus]
gi|11968182|ref|NP_072045.1| 40S ribosomal protein S18 [Homo sapiens]
gi|47087103|ref|NP_998722.1| 40S ribosomal protein S18 [Rattus norvegicus]
gi|47522714|ref|NP_999105.1| 40S ribosomal protein S18 [Sus scrofa]
gi|75812924|ref|NP_001028786.1| 40S ribosomal protein S18 [Bos taurus]
gi|189339186|ref|NP_001041547.1| 40S ribosomal protein S18 [Canis lupus familiaris]
gi|350534664|ref|NP_001232160.1| putative ribosomal protein S18 [Taeniopygia guttata]
gi|55626404|ref|XP_518400.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Pan
troglodytes]
gi|114606875|ref|XP_001170296.1| PREDICTED: 40S ribosomal protein S18 isoform 3 [Pan troglodytes]
gi|149732112|ref|XP_001497114.1| PREDICTED: 40S ribosomal protein S18-like [Equus caballus]
gi|291396021|ref|XP_002714578.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus]
gi|291408932|ref|XP_002720764.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus]
gi|293340584|ref|XP_002724624.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
gi|293351981|ref|XP_002727879.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
gi|296197873|ref|XP_002746441.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Callithrix
jacchus]
gi|297661285|ref|XP_002809198.1| PREDICTED: 40S ribosomal protein S18 [Pongo abelii]
gi|301757095|ref|XP_002914379.1| PREDICTED: 40S ribosomal protein S18-like [Ailuropoda melanoleuca]
gi|348576396|ref|XP_003473973.1| PREDICTED: 40S ribosomal protein S18-like [Cavia porcellus]
gi|390461485|ref|XP_003732681.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Callithrix
jacchus]
gi|395533922|ref|XP_003768998.1| PREDICTED: 40S ribosomal protein S18-like [Sarcophilus harrisii]
gi|395542069|ref|XP_003772957.1| PREDICTED: 40S ribosomal protein S18-like [Sarcophilus harrisii]
gi|395832139|ref|XP_003789133.1| PREDICTED: 40S ribosomal protein S18 [Otolemur garnettii]
gi|397474328|ref|XP_003808634.1| PREDICTED: 40S ribosomal protein S18 [Pan paniscus]
gi|402866647|ref|XP_003897490.1| PREDICTED: 40S ribosomal protein S18 [Papio anubis]
gi|403261570|ref|XP_003923191.1| PREDICTED: 40S ribosomal protein S18 [Saimiri boliviensis
boliviensis]
gi|410056393|ref|XP_003954027.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Pan
troglodytes]
gi|410056395|ref|XP_003954028.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Pan
troglodytes]
gi|410958910|ref|XP_003986056.1| PREDICTED: 40S ribosomal protein S18 [Felis catus]
gi|426250136|ref|XP_004018794.1| PREDICTED: 40S ribosomal protein S18 [Ovis aries]
gi|426352713|ref|XP_004043854.1| PREDICTED: 40S ribosomal protein S18 [Gorilla gorilla gorilla]
gi|50403620|sp|P62271.3|RS18_RAT RecName: Full=40S ribosomal protein S18
gi|50403625|sp|P62269.3|RS18_HUMAN RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3;
Short=Ke3
gi|54039371|sp|P62272.3|RS18_PIG RecName: Full=40S ribosomal protein S18
gi|54039385|sp|P62270.3|RS18_MOUSE RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3;
Short=Ke3
gi|62900940|sp|Q5TJE9.3|RS18_CANFA RecName: Full=40S ribosomal protein S18
gi|91207636|sp|Q3T0R1.3|RS18_BOVIN RecName: Full=40S ribosomal protein S18
gi|206558173|sp|A5JST6.1|RS18_CAPHI RecName: Full=40S ribosomal protein S18
gi|187609266|pdb|2ZKQ|MM Chain m, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|198580|gb|AAA16795.1| ribosomal protein [Mus musculus]
gi|433447|emb|CAA40750.1| ribosomal protein S18 [Rattus rattus]
gi|1841304|dbj|BAA19211.1| ribosomal protein [Sus scrofa]
gi|3811382|gb|AAC69898.1| ribosomal protein subunit S18 [Mus musculus]
gi|3820980|emb|CAA20231.1| ribosomal protein S18 [Homo sapiens]
gi|4050105|gb|AAC97978.1| RPS18 [Mus musculus]
gi|6006558|emb|CAB56794.1| ribosomal protein S18 [Homo sapiens]
gi|26341376|dbj|BAC34350.1| unnamed protein product [Mus musculus]
gi|46237544|emb|CAE83925.1| ribosomal protein S18 [Rattus norvegicus]
gi|51980402|gb|AAH81459.1| Ribosomal protein S18 [Mus musculus]
gi|51980469|gb|AAH81458.1| Ribosomal protein S18 [Mus musculus]
gi|55956952|emb|CAI11439.1| ribosomal protein S18 [Canis lupus familiaris]
gi|62533209|gb|AAH93500.1| Ribosomal protein S18 [Mus musculus]
gi|72679475|gb|AAI00605.1| Ribosomal protein S18 [Mus musculus]
gi|74141885|dbj|BAE41010.1| unnamed protein product [Mus musculus]
gi|74195924|dbj|BAE30520.1| unnamed protein product [Mus musculus]
gi|74226926|dbj|BAE27106.1| unnamed protein product [Mus musculus]
gi|74268023|gb|AAI02294.1| Ribosomal protein S18 [Bos taurus]
gi|75517276|gb|AAI01787.1| Ribosomal protein S18 [Homo sapiens]
gi|75517910|gb|AAI01789.1| Ribosomal protein S18 [Homo sapiens]
gi|76779249|gb|AAI06064.1| Ribosomal protein S18 [Homo sapiens]
gi|117558483|gb|AAI26073.1| Ribosomal protein S18 [Rattus norvegicus]
gi|119624100|gb|EAX03695.1| ribosomal protein S18, isoform CRA_b [Homo sapiens]
gi|147744669|gb|ABQ51201.1| ribosomal protein S18 [Capra hircus]
gi|148678285|gb|EDL10232.1| mCG23000, isoform CRA_b [Mus musculus]
gi|149043391|gb|EDL96842.1| rCG60872, isoform CRA_a [Rattus norvegicus]
gi|197127178|gb|ACH43676.1| putative ribosomal protein S18 [Taeniopygia guttata]
gi|296474555|tpg|DAA16670.1| TPA: 40S ribosomal protein S18 [Bos taurus]
gi|307685871|dbj|BAJ20866.1| ribosomal protein S18 [synthetic construct]
gi|355564495|gb|EHH20995.1| hypothetical protein EGK_03965 [Macaca mulatta]
gi|387018352|gb|AFJ51294.1| 40S ribosomal protein S18 [Crotalus adamanteus]
gi|444729116|gb|ELW69544.1| 40S ribosomal protein S18 [Tupaia chinensis]
Length = 152
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|281338468|gb|EFB14052.1| hypothetical protein PANDA_002275 [Ailuropoda melanoleuca]
gi|351703540|gb|EHB06459.1| 40S ribosomal protein S18, partial [Heterocephalus glaber]
gi|355561588|gb|EHH18220.1| Ke-3, partial [Macaca mulatta]
Length = 152
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|148700464|gb|EDL32411.1| mCG116671 [Mus musculus]
Length = 152
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|89257933|gb|ABD65245.1| ribosomal protein S18 [Stenella coeruleoalba]
Length = 141
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 5 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 64
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 65 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 121
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 122 GQHTKTTGRRGRTVGVSKKK 141
>gi|432094619|gb|ELK26125.1| 40S ribosomal protein S18 [Myotis davidii]
Length = 164
Score = 231 bits (589), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 28 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 87
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 88 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 144
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 145 GQHTKTTGRRGRTVGVSKKK 164
>gi|291228799|ref|XP_002734364.1| PREDICTED: ribosomal protein S18-like [Saccoglossus kowalevskii]
Length = 184
Score = 231 bits (589), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 110/140 (78%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RK+MFALTAIKG GRR+SN+V KKAD+DL KRA + S +V+K+ITIM+NPR
Sbjct: 48 MNTNIDGRRKIMFALTAIKGVGRRYSNVVCKKADVDLTKRAXKISAIQVEKLITIMSNPR 107
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L + LD+KLREDLER+KKIRAHRG+RHYWGLRVR
Sbjct: 108 QYKIPDWFLNRQKDVKDGKYSQVLANN---LDNKLREDLERMKKIRAHRGLRHYWGLRVR 164
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 165 GQHTKTTGRRGRTVGVSKKK 184
>gi|156372342|ref|XP_001628997.1| predicted protein [Nematostella vectensis]
gi|156215987|gb|EDO36934.1| predicted protein [Nematostella vectensis]
Length = 153
Score = 231 bits (589), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGK+K+MFA+T+IKG GRR++NIV KKADID+NKRAGE +E+EV++++TIM NPR
Sbjct: 16 LNTNIDGKQKIMFAMTSIKGVGRRYANIVCKKADIDMNKRAGELTEDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD DGKYSQIL LD+K+REDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDHKDGKYSQILANG---LDNKMREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGV+KKK
Sbjct: 133 GQHTKTTGRKGRTVGVAKKK 152
>gi|311334520|emb|CBN08641.1| 40S ribosomal protein S18 [Microcosmus squamiger]
Length = 152
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 128/139 (92%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG+RK+M+A+TA+KG GRRFSN++ KKAD+DL KRAGE +++E+D+++TIM NPRQ
Sbjct: 17 NTNIDGRRKIMYAMTAVKGVGRRFSNLICKKADVDLTKRAGELTDDEIDRVVTIMQNPRQ 76
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YKIPDWFLNRQKD+ DGK+SQ+L + QLD+KLRED ER+KKIRAHRG+RHYWGLRVRG
Sbjct: 77 YKIPDWFLNRQKDVKDGKFSQVL---SNQLDNKLREDTERMKKIRAHRGLRHYWGLRVRG 133
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRGRTVGVSKKK
Sbjct: 134 QHTKTTGRRGRTVGVSKKK 152
>gi|327289179|ref|XP_003229302.1| PREDICTED: 40S ribosomal protein S18-like [Anolis carolinensis]
Length = 197
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 61 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 120
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 121 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 177
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 178 GQHTKTTGRRGRTVGVSKKK 197
>gi|333036681|gb|AEF13175.1| ribosomal protein 18S [Delphacodes kuscheli]
Length = 127
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/130 (84%), Positives = 122/130 (93%), Gaps = 3/130 (2%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
RKVMFA+TAIKG GRR++NIVLKKAD+DL+KRAGECSEEEV+KIITIM +PRQYKIPDWF
Sbjct: 1 RKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIMAHPRQYKIPDWF 60
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
LNRQKDI DGKYSQ+ +++ LDSKLR+DLERLKKIRAHRGMRHYWGLRVRGQHTKTTG
Sbjct: 61 LNRQKDIQDGKYSQL---TSSNLDSKLRDDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 117
Query: 129 RRGRTVGVSK 138
RRG TVGVSK
Sbjct: 118 RRGSTVGVSK 127
>gi|147905776|ref|NP_001084747.1| ribosomal protein S18 [Xenopus laevis]
gi|46329492|gb|AAH68873.1| MGC82306 protein [Xenopus laevis]
Length = 152
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +E+EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ+L LD+KLREDLERLKKI+AHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKYSQVLANG---LDNKLREDLERLKKIKAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|74197062|dbj|BAE35083.1| unnamed protein product [Mus musculus]
gi|74204663|dbj|BAE35401.1| unnamed protein product [Mus musculus]
Length = 152
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAI+G GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIRGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|62858571|ref|NP_001016358.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis]
gi|161611793|gb|AAI55979.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis]
gi|166796647|gb|AAI59393.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis]
Length = 152
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ+L LD+KLREDLERLKKI+AHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDIKDGKYSQVLANG---LDNKLREDLERLKKIKAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|397491013|ref|XP_003816475.1| PREDICTED: 40S ribosomal protein S18-like [Pan paniscus]
Length = 152
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIDFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|312380810|gb|EFR26705.1| hypothetical protein AND_25954 [Anopheles darlingi]
Length = 146
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/140 (78%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+STNIDGKR V ALTAIKG GRR++++VLKKAD+D KRAGECS+EEV+KIITI++NPR
Sbjct: 10 LSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITIVSNPR 69
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPDWFLNRQKDIVDGKY Q+ +++ +DSKLREDLERLK+I AHRGMRH+WGLRVR
Sbjct: 70 HYKIPDWFLNRQKDIVDGKYMQL---TSSNIDSKLREDLERLKRIHAHRGMRHHWGLRVR 126
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 127 GQHTKTTGRRGRTVGVSKKK 146
>gi|402886955|ref|XP_003906876.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Papio anubis]
gi|402886957|ref|XP_003906877.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Papio anubis]
Length = 152
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKI+AHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIQAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|148668546|gb|EDL00865.1| mCG114988 [Mus musculus]
Length = 152
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKKK
Sbjct: 133 GQHTKTTGRRGQTVGVSKKK 152
>gi|148362150|gb|ABQ59673.1| ribosomal protein S18 [Salmo salar]
gi|197631783|gb|ACH70615.1| ribosomal protein S18 [Salmo salar]
gi|209732176|gb|ACI66957.1| 40S ribosomal protein S18 [Salmo salar]
gi|209733230|gb|ACI67484.1| 40S ribosomal protein S18 [Salmo salar]
gi|209736928|gb|ACI69333.1| 40S ribosomal protein S18 [Salmo salar]
gi|209738224|gb|ACI69981.1| 40S ribosomal protein S18 [Salmo salar]
gi|223646140|gb|ACN09828.1| 40S ribosomal protein S18 [Salmo salar]
gi|223646324|gb|ACN09920.1| 40S ribosomal protein S18 [Salmo salar]
gi|223671987|gb|ACN12175.1| 40S ribosomal protein S18 [Salmo salar]
gi|223672171|gb|ACN12267.1| 40S ribosomal protein S18 [Salmo salar]
gi|225703166|gb|ACO07429.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
gi|225703728|gb|ACO07710.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
gi|225705884|gb|ACO08788.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
gi|225716168|gb|ACO13930.1| 40S ribosomal protein S18 [Esox lucius]
gi|260182164|gb|ACX35593.1| ribosomal protein S18 [Salmo salar]
gi|260182178|gb|ACX35606.1| ribosomal protein S18 [Salmo salar]
gi|307147577|gb|ADN37677.1| ribosomal protein S18 [Oncorhynchus mykiss]
Length = 152
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +++EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|198425572|ref|XP_002131089.1| PREDICTED: similar to putative ribosomal protein S18 [Ciona
intestinalis]
Length = 152
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+R + FALTAIKG GRRFS +V KKAD+DL KRAGE S++E+D+I+TIM NPR
Sbjct: 16 LNTNIDGRRHIAFALTAIKGIGRRFSTLVCKKADVDLTKRAGELSDDEIDRIVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGK+ QIL + QLD+KLRED+ERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVRDGKFGQIL---SNQLDNKLREDIERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|225704576|gb|ACO08134.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
Length = 152
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +++EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLK+IRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKRIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|198578|gb|AAA16796.1| ribosomal protein [Mus musculus]
Length = 152
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L L +KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LHNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|225703456|gb|ACO07574.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
Length = 152
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +++EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVS+KK
Sbjct: 133 GQHTKTTGRRGRTVGVSRKK 152
>gi|209738282|gb|ACI70010.1| 40S ribosomal protein S18 [Salmo salar]
Length = 152
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +++EV+ ++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVEGVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|293347481|ref|XP_002726601.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
Length = 152
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ D KYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDRKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|355786340|gb|EHH66523.1| hypothetical protein EGM_03533 [Macaca fascicularis]
Length = 152
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNI G+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIYGQRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|119600195|gb|EAW79789.1| hCG1777176, isoform CRA_b [Homo sapiens]
Length = 152
Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KAD DL KRAGE +++EV+++ITIM NPR
Sbjct: 16 LNTNIDGQRKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTDDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|56758184|gb|AAW27232.1| SJCHGC01887 protein [Schistosoma japonicum]
gi|226472372|emb|CAX77222.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226472374|emb|CAX77223.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226472376|emb|CAX77224.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226472378|emb|CAX77225.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226472380|emb|CAX77226.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226472382|emb|CAX77227.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226472384|emb|CAX77228.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226472386|emb|CAX77229.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226472388|emb|CAX77230.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226473486|emb|CAX71428.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226473488|emb|CAX71429.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226473490|emb|CAX71430.1| ribosomal protein S18 [Schistosoma japonicum]
gi|226473492|emb|CAX71431.1| ribosomal protein S18 [Schistosoma japonicum]
Length = 152
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 131/140 (93%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+ K+M+A+T+IKG GRR++N+V KKADIDLNKRAGE +++EV+K++T+M+NPR
Sbjct: 16 MNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGK+SQ++ +A L++KLREDLERLK+IR+HRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVDDGKHSQLM---SAALETKLREDLERLKRIRSHRGIRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVS+KK
Sbjct: 133 GQHTKTTGRRGRTVGVSRKK 152
>gi|159145774|gb|ABW90424.1| putative ribosomal protein S18 [Barentsia elongata]
Length = 154
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+ K+M+ALTAIKG GRR++N+VLKKAD+DL KRAGE ++EEV+ ++TI+ NP+
Sbjct: 16 MNTNIDGRIKIMYALTAIKGVGRRYANLVLKKADVDLRKRAGELTDEEVEAVVTIINNPK 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDI DGKY Q+ ++ LD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDIKDGKYMQV---TSNGLDNKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|392348146|ref|XP_003750029.1| PREDICTED: uncharacterized protein LOC100912024 [Rattus norvegicus]
Length = 292
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 156 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 215
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ D KYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 216 QYKIPDWFLNRQKDVKDRKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 272
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG TVGVSKKK
Sbjct: 273 GQHTKTTGRRGHTVGVSKKK 292
>gi|296411741|ref|XP_002835588.1| 40S ribosomal protein S18 [Tuber melanosporum Mel28]
gi|295629374|emb|CAZ79745.1| unnamed protein product [Tuber melanosporum]
Length = 216
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 79 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTIIQNPT 138
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI+DGK SQIL S LD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 139 QYKIPTWFLNRQRDIIDGKDSQILANS---LDNKLREDLERLKKIRAHRGLRHYWGLRVR 195
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 196 GQHSKTTGRRGRTVGVSKKK 215
>gi|225734652|gb|ACO25361.1| 40S ribosomal protein S18, partial [Gillichthys seta]
gi|226442023|gb|ACO57601.1| 40S ribosomal protein S18 [Gillichthys mirabilis]
Length = 142
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/136 (76%), Positives = 125/136 (91%), Gaps = 3/136 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +EEEV++++TIM NPR
Sbjct: 10 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIMQNPR 69
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 70 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 126
Query: 121 GQHTKTTGRRGRTVGV 136
GQHTKTTGRRGRTVGV
Sbjct: 127 GQHTKTTGRRGRTVGV 142
>gi|293359376|ref|XP_002729551.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
Length = 152
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ D KYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDRKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG TVGVSKKK
Sbjct: 133 GQHTKTTGRRGHTVGVSKKK 152
>gi|378728944|gb|EHY55403.1| 40S ribosomal protein S18 [Exophiala dermatitidis NIH/UT8656]
Length = 173
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 36 LNTNVDGKQKIMYALTRIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTIIQNPT 95
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQ+DIVDGK +Q+L S ++SKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 96 QYKIPEWFLNRQRDIVDGKNTQVLANS---MESKLREDLERLKKIRAHRGLRHYWGLRVR 152
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 153 GQHTKTTGRRGRTVGVSKKK 172
>gi|327239254|gb|AEA39494.1| ribosomal protein S18 [Ailuropoda melanoleuca]
gi|327239350|gb|AEA39542.1| ribosomal protein S18 [Ailuropoda melanoleuca]
Length = 152
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGL R
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLGER 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|224066487|ref|XP_002302108.1| predicted protein [Populus trichocarpa]
gi|118481417|gb|ABK92651.1| unknown [Populus trichocarpa]
gi|222843834|gb|EEE81381.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S EE+DK++TI+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|224082650|ref|XP_002306780.1| predicted protein [Populus trichocarpa]
gi|118481499|gb|ABK92692.1| unknown [Populus trichocarpa]
gi|222856229|gb|EEE93776.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S EE+DK++TI+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|426341431|ref|XP_004036040.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Gorilla
gorilla gorilla]
gi|426341435|ref|XP_004036042.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Gorilla
gorilla gorilla]
gi|426341437|ref|XP_004036043.1| PREDICTED: 40S ribosomal protein S18-like isoform 4 [Gorilla
gorilla gorilla]
Length = 154
Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ F +TAIKG GRR++++VL+KAD DL KRAGE +++EV+++ITIM NPR
Sbjct: 16 LNTNIDGQRKIAFTITAIKGVGRRYAHVVLRKADTDLTKRAGELTDDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|124783098|gb|ABN14904.1| ribosomal protein S18 [Taenia asiatica]
Length = 152
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RK+ +ALTAIKG GRR++ +V KKAD+D+ KRAGE +++E++KI+T+M NPR
Sbjct: 16 MNTNIDGQRKITYALTAIKGVGRRYATVVCKKADVDIRKRAGELTDDEIEKIVTVMANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDI DGK++Q+L LDSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDIEDGKHTQLLAQG---LDSKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|62083469|gb|AAX62459.1| ribosomal protein S18 [Lysiphlebus testaceipes]
Length = 155
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
MSTNIDG RK+ ALT IKG GRR++++V+KKADI L KRAGEC+EEE++KI+TI+ NPR
Sbjct: 19 MSTNIDGNRKITLALTDIKGVGRRYADMVVKKADIALQKRAGECTEEEIEKIVTIIANPR 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPD++LNRQKD VDGKYSQ+ + + +DSKLREDLERLKKIRAH+G+RHYWGLRVR
Sbjct: 79 HYKIPDYYLNRQKDKVDGKYSQL---TGSSVDSKLREDLERLKKIRAHKGLRHYWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 136 GQHTKTTGRRGRTVGVSKKK 155
>gi|340374862|ref|XP_003385956.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Amphimedon
queenslandica]
gi|340374864|ref|XP_003385957.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Amphimedon
queenslandica]
Length = 152
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG++K+M+ LT IKG GRR++N+V KKA++D+NKRAGE +EEE+++++TI+ NPR
Sbjct: 16 LNTNIDGRQKIMYGLTCIKGVGRRYANLVCKKAEVDMNKRAGELTEEEIERVVTILQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPD+FLNRQKDI DGKYSQ++ + QLD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 76 PYKIPDYFLNRQKDIKDGKYSQVV---SNQLDNKLREDLERLKKIRAHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|452824136|gb|EME31141.1| 40S ribosomal protein S18 [Galdieria sulphuraria]
Length = 154
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 128/140 (91%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGKRKVM+ALT+IKG GRRFSN+VLKKA++D++KRAG+ + EE+D+I+TI+ NPR
Sbjct: 17 LNTNIDGKRKVMYALTSIKGVGRRFSNLVLKKAEVDVSKRAGDLTAEEIDRIVTIIQNPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD+ DGKY+Q++ + LD KLREDL+RL+KIRAHRG+RH WGLRVR
Sbjct: 77 QFKIPDWFLNRQKDVRDGKYTQLI---SNNLDFKLREDLDRLRKIRAHRGLRHMWGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 134 GQHTKTTGRRGRTVGVSKKK 153
>gi|426341433|ref|XP_004036041.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Gorilla
gorilla gorilla]
Length = 166
Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ F +TAIKG GRR++++VL+KAD DL KRAGE +++EV+++ITIM NPR
Sbjct: 28 LNTNIDGQRKIAFTITAIKGVGRRYAHVVLRKADTDLTKRAGELTDDEVERVITIMQNPR 87
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 88 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 144
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 145 GQHTKTTGRRGRTVGVSKKK 164
>gi|315048097|ref|XP_003173423.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893]
gi|311341390|gb|EFR00593.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893]
Length = 155
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL+KRAGE S EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK SQ+L Q+DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDITDGKDSQVL---ANQMDSKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|109073773|ref|XP_001099137.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca
mulatta]
gi|109073775|ref|XP_001099240.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca
mulatta]
gi|297292315|ref|XP_002804060.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
gi|297292317|ref|XP_002804061.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
Length = 152
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG++K+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRQKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH KTTGR GRTVGVSKKK
Sbjct: 133 GQHAKTTGRCGRTVGVSKKK 152
>gi|149940233|emb|CAM32184.1| ribosomal protein S18 [Sparus aurata]
Length = 132
Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 105/135 (77%), Positives = 123/135 (91%), Gaps = 3/135 (2%)
Query: 6 DGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIP 65
DG+RK+ FA+TAIKG GRR++++VL+KADIDLNKRAGE ++EEV++ +TIM NPRQYKIP
Sbjct: 1 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERAVTIMQNPRQYKIP 60
Query: 66 DWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTK 125
DWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQHTK
Sbjct: 61 DWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTK 117
Query: 126 TTGRRGRTVGVSKKK 140
TTGRRGRTVGVSKKK
Sbjct: 118 TTGRRGRTVGVSKKK 132
>gi|322695969|gb|EFY87768.1| 40S ribosomal protein S18 [Metarhizium acridum CQMa 102]
gi|322707043|gb|EFY98622.1| 40S ribosomal protein S18 [Metarhizium anisopliae ARSEF 23]
Length = 156
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDSQILANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|154270985|ref|XP_001536346.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1]
gi|150409569|gb|EDN05013.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1]
gi|225555622|gb|EEH03913.1| 40S ribosomal protein S18 [Ajellomyces capsulatus G186AR]
gi|325091939|gb|EGC45249.1| 40S ribosomal protein S18 [Ajellomyces capsulatus H88]
Length = 155
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK SQ+L Q++SKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDITDGKDSQVL---ANQMESKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|247421835|gb|ACS96445.1| S18.A ribosomal protein [Jatropha curcas]
Length = 152
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S EE+DK++ I+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|255559398|ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis]
gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18, putative [Ricinus communis]
gi|313586541|gb|ADR71281.1| 40S ribosomal protein S18A [Hevea brasiliensis]
Length = 152
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S EE+DK++ I+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|258569403|ref|XP_002543505.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704]
gi|237903775|gb|EEP78176.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704]
Length = 157
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 20 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTIIQNPT 79
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK SQ+L + +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 80 QYKIPTWFLNRQRDITDGKDSQVLANN---MDSKLREDLERLKKIRAHRGLRHYWGLRVR 136
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 137 GQHTKTTGRRGRTVGVSKKK 156
>gi|346322098|gb|EGX91697.1| 40S ribosomal protein S18 [Cordyceps militaris CM01]
Length = 156
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVMFALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMFALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK S IL +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKDSHILANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|340520187|gb|EGR50424.1| ribosomal protein S18, S13 family [Trichoderma reesei QM6a]
gi|358391393|gb|EHK40797.1| hypothetical protein TRIATDRAFT_148397 [Trichoderma atroviride IMI
206040]
Length = 156
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK S IL +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPAWFLNRQRDIVDGKDSHILANG---VDSKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|302500473|ref|XP_003012230.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371]
gi|302652150|ref|XP_003017934.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517]
gi|327292934|ref|XP_003231164.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
gi|291175787|gb|EFE31590.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371]
gi|291181521|gb|EFE37289.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517]
gi|326466583|gb|EGD92036.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
gi|326473764|gb|EGD97773.1| 40S ribosomal protein S18 [Trichophyton tonsurans CBS 112818]
Length = 155
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL+KRAGE S EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK +Q+L Q+DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDITDGKDTQVL---ANQMDSKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|121700288|ref|XP_001268409.1| 40S ribosomal protein S18 [Aspergillus clavatus NRRL 1]
gi|119396551|gb|EAW06983.1| ribosomal protein S13p/S18e [Aspergillus clavatus NRRL 1]
Length = 155
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL+KRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ+L + LDSKLREDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDSQVL---SNGLDSKLREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|312082633|ref|XP_003143525.1| 40S ribosomal protein S18 [Loa loa]
gi|307761312|gb|EFO20546.1| 40S ribosomal protein S18 [Loa loa]
Length = 154
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG RKV FALTAIKG GRRF+ +V +KADID+N+RAGE SEE+++K+ +M NP
Sbjct: 16 MNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDI DGKYSQ+L TS LD+KLREDLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDIKDGKYSQVLSTS---LDNKLREDLERLKKIRLHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGVSKKK
Sbjct: 133 GQHTKTTGRKGRTVGVSKKK 152
>gi|119473095|ref|XP_001258494.1| 40S ribosomal protein S18 [Neosartorya fischeri NRRL 181]
gi|119406646|gb|EAW16597.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181]
Length = 155
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL+KRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ+L + LDSKLREDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKDSQVL---SNGLDSKLREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|224085191|ref|XP_002307515.1| predicted protein [Populus trichocarpa]
gi|222856964|gb|EEE94511.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRFSNIV KKAD+D+NKRAGE S E+D ++TI+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFSNIVCKKADVDMNKRAGELSAAELDNLMTIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|390333626|ref|XP_784070.3| PREDICTED: 40S ribosomal protein S18-like [Strongylocentrotus
purpuratus]
Length = 160
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+M+ALTAIKG GRR++NI +KADID++KRAGE +++EV+K++TI+ NPR
Sbjct: 24 LNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTILQNPR 83
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQ D+ DGKY Q++ + LD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 84 QYKIPDWFLNRQMDVKDGKYGQMMANN---LDNKLREDLERLKKIRAHRGLRHYWGLRVR 140
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 141 GQHTKTTGRRGRTVGVSKKK 160
>gi|342879677|gb|EGU80917.1| hypothetical protein FOXB_08581 [Fusarium oxysporum Fo5176]
gi|408388269|gb|EKJ67955.1| hypothetical protein FPSE_11766 [Fusarium pseudograminearum CS3096]
Length = 156
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WF+NRQ+DIVDGK S IL +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFINRQRDIVDGKDSHILANG---VDSKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|440909611|gb|ELR59500.1| 40S ribosomal protein S18, partial [Bos grunniens mutus]
Length = 151
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 125/139 (89%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKTTGR GRTVGV ++
Sbjct: 133 GQHTKTTGRGGRTVGVPRR 151
>gi|27658598|ref|XP_226269.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
Length = 152
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TN+DG+RK+ A+TAIKG G R++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LDTNVDGQRKIALAITAIKGVGWRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L S LD+KLREDLER+KKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDMKDGKYSQVLANS---LDNKLREDLERVKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
G+HTKTTGRRGRTVGVSKKK
Sbjct: 133 GRHTKTTGRRGRTVGVSKKK 152
>gi|225678479|gb|EEH16763.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb03]
Length = 201
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 64 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTIIQNPT 123
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK +Q+L Q++SKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 124 QYKIPTWFLNRQRDITDGKDTQVL---ANQMESKLREDLERLKKIRAHRGLRHYWGLRVR 180
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 181 GQHTKTTGRRGRTVGVSKKK 200
>gi|154316255|ref|XP_001557449.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10]
gi|156037576|ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154697910|gb|EDN97648.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 156
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GK+KVMFALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVEGKQKVMFALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ+L +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKDSQVLANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|426384215|ref|XP_004058669.1| PREDICTED: 40S ribosomal protein S18-like [Gorilla gorilla gorilla]
Length = 248
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+K DIDL KRAGE E+EV+++ITIM NPR
Sbjct: 112 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKTDIDLTKRAGELIEDEVERVITIMQNPR 171
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKY+Q+L LD++LREDLERLKKIRAHRG+ H+WGLRVR
Sbjct: 172 QYKIPDWFLNRQKDVKDGKYNQVLANG---LDNELREDLERLKKIRAHRGLSHFWGLRVR 228
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRT+GVSKKK
Sbjct: 229 GQHTKTTGRRGRTIGVSKKK 248
>gi|390333608|ref|XP_794924.2| PREDICTED: 40S ribosomal protein S18-like [Strongylocentrotus
purpuratus]
Length = 153
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+M+ALTAIKG GRR++NI +KADID++KRAGE +++EV+K++TI+ NPR
Sbjct: 17 LNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTILQNPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQ D+ DGKY Q++ + LD+KLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 77 QYKIPDWFLNRQMDVKDGKYGQMMANN---LDNKLREDLERLKKIRAHRGLRHYWGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 134 GQHTKTTGRRGRTVGVSKKK 153
>gi|340536256|gb|AEK48265.1| ribosomal protein L32e [Cochliomyia hominivorax]
Length = 146
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/134 (77%), Positives = 123/134 (91%), Gaps = 3/134 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNI GKRKV A+TAIKG GRR+SNIVLKKADIDL KRAGEC+EEEV+KI+TI++NP
Sbjct: 16 MNTNIGGKRKVGIAMTAIKGVGRRYSNIVLKKADIDLTKRAGECTEEEVEKIVTIISNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YK+P+WFLNRQKDI+DGKY+Q+ +++ LDSKLR+DLERLKKIR+HRG+RHYWGLRVR
Sbjct: 76 HYKVPNWFLNRQKDIIDGKYNQL---TSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTV 134
GQHTKTTGRRGRTV
Sbjct: 133 GQHTKTTGRRGRTV 146
>gi|109097924|ref|XP_001085646.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Macaca
mulatta]
gi|297263054|ref|XP_002798738.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca
mulatta]
gi|297263056|ref|XP_002798739.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca
mulatta]
Length = 152
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNI G+RK+ FA+TAIKG G+R++++VL+KADIDL KRAGE +E+EV+++ITIM NP
Sbjct: 16 LNTNIYGQRKIAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPH 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+ H+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLHHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|46125031|ref|XP_387069.1| hypothetical protein FG06893.1 [Gibberella zeae PH-1]
Length = 179
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 41 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTILQNPT 100
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WF+NRQ+DIVDGK S IL +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 101 QYKIPTWFINRQRDIVDGKDSHILANG---VDSKLREDLERLKKIRAHRGLRHYWGLRVR 157
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 158 GQHTKTTGRRGRTVGVSKKK 177
>gi|407919321|gb|EKG12572.1| Ribosomal protein S13 [Macrophomina phaseolina MS6]
Length = 155
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DL KRAGE + EE+++I+TIM NP
Sbjct: 18 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLTKRAGELTSEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK QIL +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDYQILANG---VDSKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|170592174|ref|XP_001900844.1| 40S ribosomal protein S18 [Brugia malayi]
gi|158591711|gb|EDP30315.1| 40S ribosomal protein S18, putative [Brugia malayi]
gi|402594698|gb|EJW88624.1| 30S ribosomal protein S13p/S18e [Wuchereria bancrofti]
Length = 154
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG RKV FALTAIKG GRRF+ +V +KADID+N+RAGE SEE+++K+ +M NP
Sbjct: 16 MNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDI DGKYSQ+L TS LD+KLREDLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDIKDGKYSQMLSTS---LDNKLREDLERLKKIRLHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGVSKKK
Sbjct: 133 GQHTKTTGRKGRTVGVSKKK 152
>gi|157361543|gb|ABV44729.1| 40S ribosomal protein S18-like protein [Phlebotomus papatasi]
Length = 152
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR++NI LKKAD+DL+KRAGEC++EEV++++ ++ NPR
Sbjct: 16 MNTNIDGKRKVPIAMTAIKGVGRRYANIALKKADVDLSKRAGECTDEEVERVVAVIQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPDWFLNRQKD+ DGKY Q+ ++A L+SKLR+DLERLKKI AHRG+RH+WGLRVR
Sbjct: 76 IYKIPDWFLNRQKDVTDGKYYQL---TSAVLESKLRDDLERLKKICAHRGLRHHWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|295668839|ref|XP_002794968.1| 40S ribosomal protein S18 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285661|gb|EEH41227.1| 40S ribosomal protein S18 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226294814|gb|EEH50234.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb18]
Length = 155
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK +Q+L Q++SKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDITDGKDTQVL---ANQMESKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|400594814|gb|EJP62643.1| 40S ribosomal protein S18 [Beauveria bassiana ARSEF 2860]
Length = 156
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DL+KRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLDKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKDSQILANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|392593620|gb|EIW82945.1| ribosomal protein S13 [Coniophora puteana RWD-64-598 SS2]
Length = 156
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERIVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQKDIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 79 QYKIPTWFLNRQKDIVDGKNSQIL---SNGVDSKLRDDLERLKKIRAHRGLRHYWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|402086476|gb|EJT81374.1| 40S ribosomal protein S18 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 156
Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+++ALT IKG GRR+SN+V+KKAD+DLNKRAGE + EE+++++TI+ NP
Sbjct: 18 LNTNVDGKQKIVYALTKIKGVGRRYSNLVVKKADVDLNKRAGELTSEELERVVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ+L +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPAWFLNRQRDIVDGKDSQLLANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|296809581|ref|XP_002845129.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480]
gi|238844612|gb|EEQ34274.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480]
Length = 155
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL+KRAGE S EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK SQ+L Q++SKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDINDGKDSQVL---ANQMESKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|56755399|gb|AAW25879.1| unknown [Schistosoma japonicum]
Length = 157
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+ K+M+A+T+IKG GRR++N+V KKADIDLNKRAGE +++EV+K++T+M+NP
Sbjct: 21 MNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVMSNPS 80
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q KIPDWFLNRQKD+ DGK+SQ++ +A L++KLREDLERLK+IR+HRG+RHYWGLRVR
Sbjct: 81 QSKIPDWFLNRQKDVDDGKHSQLM---SAALETKLREDLERLKRIRSHRGIRHYWGLRVR 137
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVS+KK
Sbjct: 138 GQHTKTTGRRGRTVGVSRKK 157
>gi|261188787|ref|XP_002620807.1| 40S ribosomal protein S18 [Ajellomyces dermatitidis SLH14081]
gi|239592039|gb|EEQ74620.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081]
gi|239610306|gb|EEQ87293.1| 40S ribosomal protein S18 [Ajellomyces dermatitidis ER-3]
gi|327349270|gb|EGE78127.1| ribosomal protein S13p/S18e [Ajellomyces dermatitidis ATCC 18188]
Length = 155
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL KRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK SQ+L Q++SKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDITDGKDSQVL---ANQMESKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|169784886|ref|XP_001826904.1| 40S ribosomal protein S18 [Aspergillus oryzae RIB40]
gi|238507888|ref|XP_002385145.1| 40S ribosomal protein S18 [Aspergillus flavus NRRL3357]
gi|83775651|dbj|BAE65771.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220688664|gb|EED45016.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357]
gi|391864474|gb|EIT73770.1| ribosomal protein [Aspergillus oryzae 3.042]
Length = 155
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++++TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERVVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK SQ++ + LDSK+REDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDITDGKDSQVV---SNNLDSKMREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|389625811|ref|XP_003710559.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15]
gi|59802871|gb|AAX07649.1| 40S ribosomal protein S18-like protein [Magnaporthe grisea]
gi|351650088|gb|EHA57947.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15]
gi|440467724|gb|ELQ36923.1| 40S ribosomal protein S18 [Magnaporthe oryzae Y34]
gi|440480610|gb|ELQ61265.1| 40S ribosomal protein S18 [Magnaporthe oryzae P131]
Length = 156
Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+++ALT IKG GRR+SN+V+KKAD+DLNKRAGE + EE+++++TI+ NP
Sbjct: 18 LNTNVDGKQKIVYALTKIKGVGRRYSNLVVKKADVDLNKRAGELTSEELERVVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ L +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKDSQTLANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|332817710|ref|XP_003310009.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Pan
troglodytes]
gi|410037254|ref|XP_003950204.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Pan
troglodytes]
gi|410037256|ref|XP_003950205.1| PREDICTED: 40S ribosomal protein S18-like isoform 4 [Pan
troglodytes]
Length = 152
Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNID +RK+ FA+TAIKG GRR+++ VL+KAD DL KRAGE +++EV+++ITIM NPR
Sbjct: 16 LNTNIDVQRKIAFAITAIKGVGRRYAHAVLRKADTDLTKRAGELTDDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHLWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|398407245|ref|XP_003855088.1| 40S ribosomal protein S18 [Zymoseptoria tritici IPO323]
gi|339474972|gb|EGP90064.1| hypothetical protein MYCGRDRAFT_55708 [Zymoseptoria tritici IPO323]
Length = 155
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKEKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIVQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK Q+L +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDYQVLANG---VDSKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|410037252|ref|XP_003950203.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Pan
troglodytes]
Length = 164
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNID +RK+ FA+TAIKG GRR+++ VL+KAD DL KRAGE +++EV+++ITIM NPR
Sbjct: 28 LNTNIDVQRKIAFAITAIKGVGRRYAHAVLRKADTDLTKRAGELTDDEVERVITIMQNPR 87
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH WGLRVR
Sbjct: 88 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHLWGLRVR 144
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 145 GQHTKTTGRRGRTVGVSKKK 164
>gi|313586543|gb|ADR71282.1| 40S ribosomal protein S18C [Hevea brasiliensis]
Length = 152
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S EE+DK++ I+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGFRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKT GRRG+TVGVSKK+
Sbjct: 133 GQHTKTPGRRGKTVGVSKKR 152
>gi|119196879|ref|XP_001249043.1| 40S ribosomal protein S18 [Coccidioides immitis RS]
gi|303322136|ref|XP_003071061.1| 40S ribosomal protein S18 [Coccidioides posadasii C735 delta SOWgp]
gi|240110760|gb|EER28916.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320032724|gb|EFW14675.1| 40S ribosomal protein S18 [Coccidioides posadasii str. Silveira]
gi|392861774|gb|EAS31956.2| 40S ribosomal protein S18 [Coccidioides immitis RS]
Length = 155
Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL KRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITTEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK SQ+L + +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDITDGKDSQVLANN---MDSKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|302680575|ref|XP_003029969.1| 40S ribosomal protein S18 [Schizophyllum commune H4-8]
gi|300103660|gb|EFI95066.1| hypothetical protein SCHCODRAFT_85470 [Schizophyllum commune H4-8]
Length = 156
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR+SNIV KKAD+DLNKRAGE + +E+++I+TIM NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYSNIVCKKADVDLNKRAGELNSDELERIVTIMQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDIVDGK QIL + +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 79 QFKIPTWFLNRQKDIVDGKDYQIL---SNGIDSKLRDDLERLKKIRAHRGLRHYWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|307109786|gb|EFN58023.1| 40S ribosomal protein S18 [Chlorella variabilis]
Length = 153
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALTAIKG GRRFSNI KKA++DLNKRAGE S EE++ I+TI+ NPR
Sbjct: 17 LNTNVDGKQKIMYALTAIKGIGRRFSNICCKKAEVDLNKRAGELSAEELESIMTIVANPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPDWFLNRQKD+ DG+YSQ+ TS+A LD+KLR+DLERLKKIR HRG+RHYWGL VR
Sbjct: 77 AYKIPDWFLNRQKDVKDGRYSQV--TSSA-LDTKLRDDLERLKKIRNHRGLRHYWGLTVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGV+KKK
Sbjct: 134 GQHTKTTGRRGKTVGVAKKK 153
>gi|324525495|gb|ADY48555.1| 40S ribosomal protein S18 [Ascaris suum]
Length = 154
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG RKV FALTAIKG GRRF+ +V +KADID+NKRAGE +EE+++K+ +M NP+
Sbjct: 16 MNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINKRAGELTEEDMEKLTQVMQNPK 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDI DGKY+Q L T+ LD+KLREDLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDIKDGKYTQCLSTA---LDNKLREDLERLKKIRLHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGVSKKK
Sbjct: 133 GQHTKTTGRKGRTVGVSKKK 152
>gi|350033964|dbj|GAA34279.1| small subunit ribosomal protein S18e [Clonorchis sinensis]
Length = 149
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RK+M+A+ AIKGCGRR++ +V KKADIDLNKRAGE +E+EV+K++T+M NPR
Sbjct: 13 MNTNIDGQRKIMYAICAIKGCGRRYATVVCKKADIDLNKRAGELTEDEVEKLVTVMGNPR 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYK+P WFLNRQ+DI DGK SQ++ + L++KLREDLERLK+IRAHRG+RHYWGLRVR
Sbjct: 73 QYKVPVWFLNRQRDIEDGKSSQLM---SGALETKLREDLERLKRIRAHRGVRHYWGLRVR 129
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TKTTGRRGRTVGVS+KK
Sbjct: 130 GQRTKTTGRRGRTVGVSRKK 149
>gi|320587800|gb|EFX00275.1| 40S ribosomal protein s18 [Grosmannia clavigera kw1407]
Length = 156
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGK+KV++ALT +KGCGRR++NIV KKADIDLN RAGE + E++++I++I+ +P
Sbjct: 18 LNTNIDGKQKVVYALTKVKGCGRRYANIVAKKADIDLNLRAGELTAEQLERIVSILQSPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL +DSKLREDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKDSQILANG---VDSKLREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|449296287|gb|EMC92307.1| hypothetical protein BAUCODRAFT_126295 [Baudoinia compniacensis
UAMH 10762]
Length = 155
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK QIL +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDYQILANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|15219950|ref|NP_173692.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
gi|15234790|ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
gi|18399100|ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
gi|297809155|ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp.
lyrata]
gi|297845304|ref|XP_002890533.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp.
lyrata]
gi|297851838|ref|XP_002893800.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp.
lyrata]
gi|464707|sp|P34788.1|RS18_ARATH RecName: Full=40S ribosomal protein S18
gi|10086474|gb|AAG12534.1|AC015446_15 ribosomal protein S18 [Arabidopsis thaliana]
gi|10092450|gb|AAG12853.1|AC079286_10 40S ribosomal protein S18; 25853-24673 [Arabidopsis thaliana]
gi|14423408|gb|AAK62386.1|AF386941_1 S18.A ribosomal protein [Arabidopsis thaliana]
gi|15724158|gb|AAL06471.1|AF411781_1 At1g22780/T22J18_5 [Arabidopsis thaliana]
gi|405613|emb|CAA80684.1| ribosomal protein S18A [Arabidopsis thaliana]
gi|434343|emb|CAA82273.1| S18 ribosomal protein [Arabidopsis thaliana]
gi|434345|emb|CAA82274.1| S18 ribosomal protein [Arabidopsis thaliana]
gi|434906|emb|CAA82275.1| S18 ribosomal protein [Arabidopsis thaliana]
gi|2505871|emb|CAA72909.1| ribosomal protein S18A [Arabidopsis thaliana]
gi|3287678|gb|AAC25506.1| Match to ribosomal S18 gene mRNA gb|Z28701, DNA gb|Z23165 from A.
thaliana. ESTs gb|T21121, gb|Z17755, gb|R64776 and
gb|R30430 come from this gene [Arabidopsis thaliana]
gi|4538910|emb|CAB39647.1| S18.A ribosomal protein [Arabidopsis thaliana]
gi|7267675|emb|CAB78103.1| S18.A ribosomal protein [Arabidopsis thaliana]
gi|14334584|gb|AAK59471.1| putative ribosomal protein S18 [Arabidopsis thaliana]
gi|17979113|gb|AAL47500.1| putative ribosomal protein S18 [Arabidopsis thaliana]
gi|21555397|gb|AAM63849.1| ribosomal protein S18, putative [Arabidopsis thaliana]
gi|21592452|gb|AAM64403.1| ribosomal protein S18, putative [Arabidopsis thaliana]
gi|21593027|gb|AAM64976.1| ribosomal protein S18, putative [Arabidopsis thaliana]
gi|30102858|gb|AAP21347.1| At4g09800 [Arabidopsis thaliana]
gi|56236126|gb|AAV84519.1| At1g22780 [Arabidopsis thaliana]
gi|98961089|gb|ABF59028.1| At1g22780 [Arabidopsis thaliana]
gi|145713244|gb|ABP96570.1| pointed first leaf [Arabidopsis thaliana]
gi|145713246|gb|ABP96571.1| pointed first leaf [Arabidopsis thaliana]
gi|145713248|gb|ABP96572.1| pointed first leaf [Arabidopsis thaliana]
gi|145713250|gb|ABP96573.1| pointed first leaf [Arabidopsis thaliana]
gi|145713252|gb|ABP96574.1| pointed first leaf [Arabidopsis thaliana]
gi|145713254|gb|ABP96575.1| pointed first leaf [Arabidopsis thaliana]
gi|145713256|gb|ABP96576.1| pointed first leaf [Arabidopsis thaliana]
gi|145713258|gb|ABP96577.1| pointed first leaf [Arabidopsis thaliana]
gi|145713260|gb|ABP96578.1| pointed first leaf [Arabidopsis thaliana]
gi|145713262|gb|ABP96579.1| pointed first leaf [Arabidopsis thaliana]
gi|145713264|gb|ABP96580.1| pointed first leaf [Arabidopsis thaliana]
gi|145713266|gb|ABP96581.1| pointed first leaf [Arabidopsis thaliana]
gi|145713268|gb|ABP96582.1| pointed first leaf [Arabidopsis thaliana]
gi|145713270|gb|ABP96583.1| pointed first leaf [Arabidopsis thaliana]
gi|145713272|gb|ABP96584.1| pointed first leaf [Arabidopsis thaliana]
gi|145713274|gb|ABP96585.1| pointed first leaf [Arabidopsis thaliana]
gi|145713276|gb|ABP96586.1| pointed first leaf [Arabidopsis thaliana]
gi|145713278|gb|ABP96587.1| pointed first leaf [Arabidopsis thaliana]
gi|145713280|gb|ABP96588.1| pointed first leaf [Arabidopsis thaliana]
gi|145713282|gb|ABP96589.1| pointed first leaf [Arabidopsis thaliana]
gi|145713284|gb|ABP96590.1| pointed first leaf [Arabidopsis thaliana]
gi|297318298|gb|EFH48720.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp.
lyrata]
gi|297336375|gb|EFH66792.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp.
lyrata]
gi|297339642|gb|EFH70059.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp.
lyrata]
gi|332192166|gb|AEE30287.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
gi|332193538|gb|AEE31659.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
gi|332657400|gb|AEE82800.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
Length = 152
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRR +NIV KKAD+D+NKRAGE S E+D ++TI+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|223469633|gb|ACM90157.1| S18 ribosomal protein [Jatropha curcas]
Length = 152
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S EE+DK++ I+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR RG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNPRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|452986052|gb|EME85808.1| hypothetical protein MYCFIDRAFT_59626 [Pseudocercospora fijiensis
CIRAD86]
Length = 155
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+A+T IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYAMTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK Q+L +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDGQVLANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|67538542|ref|XP_663045.1| hypothetical protein AN5441.2 [Aspergillus nidulans FGSC A4]
gi|40743411|gb|EAA62601.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259485111|tpe|CBF81904.1| TPA: ribosomal protein S13p/S18e (AFU_orthologue; AFUA_6G13550)
[Aspergillus nidulans FGSC A4]
Length = 155
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK K+M+ALT +KG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKEKIMYALTQVKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK Q+L + LDSK REDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDYQVL---SNGLDSKYREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|170092941|ref|XP_001877692.1| 40S ribosomal protein S18 [Laccaria bicolor S238N-H82]
gi|164647551|gb|EDR11795.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 156
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERIVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQKDIVDGKNSQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|453087769|gb|EMF15810.1| 40S ribosomal protein S18 [Mycosphaerella populorum SO2202]
Length = 155
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KVM+A+T IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKEKVMYAMTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK Q+L +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDGQVLANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|440633431|gb|ELR03350.1| 40S ribosomal protein S18 [Geomyces destructans 20631-21]
Length = 156
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GK+KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVEGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK Q+L + +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPAWFLNRQRDIVDGKDYQVLANN---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|409080527|gb|EKM80887.1| hypothetical protein AGABI1DRAFT_83832 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197447|gb|EKV47374.1| hypothetical protein AGABI2DRAFT_136076 [Agaricus bisporus var.
bisporus H97]
Length = 156
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRKVM+ALT IKG GRR+SNIV KKAD+DLNKRAG+ + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKRKVMYALTEIKGVGRRYSNIVCKKADVDLNKRAGDLNSDELERIVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQKDIVDGKNSQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|242772774|ref|XP_002478105.1| 40S ribosomal protein S18 [Talaromyces stipitatus ATCC 10500]
gi|218721724|gb|EED21142.1| ribosomal protein S13p/S18e [Talaromyces stipitatus ATCC 10500]
Length = 163
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL+KRAG+ + EE+++I+TI+ NP
Sbjct: 26 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTIIQNPT 85
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ++ + +DSKLREDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 86 QYKIPSWFLNRQRDIVDGKDSQVI---SNGVDSKLREDLERLKKIRSHRGLRHYWGLRVR 142
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 143 GQHTKTTGRRGRTVGVSKKK 162
>gi|56462228|gb|AAV91397.1| ribosomal protein 25 [Lonomia obliqua]
Length = 116
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/119 (88%), Positives = 115/119 (96%), Gaps = 3/119 (2%)
Query: 22 GRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYS 81
GRR+SNIVLKKADIDL+KRAGEC+EEEV+KIITIM+NPRQYKIPDWFLNRQKDI+DGKYS
Sbjct: 1 GRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIIDGKYS 60
Query: 82 QILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
Q+ +++ LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 61 QL---TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 116
>gi|255566712|ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis]
gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18, putative [Ricinus communis]
Length = 152
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE + E+D ++ I+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|452002309|gb|EMD94767.1| hypothetical protein COCHEDRAFT_1019764 [Cochliobolus
heterostrophus C5]
Length = 155
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT I G GRR+SN+V KKAD+DL KRAG+ + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLTKRAGDLTSEELERIVTIIQNPL 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL A SKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKNSQILANGVA---SKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|145240679|ref|XP_001392986.1| 40S ribosomal protein S18 [Aspergillus niger CBS 513.88]
gi|134077510|emb|CAK96654.1| unnamed protein product [Aspergillus niger]
Length = 155
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL+KRAGE + EE+++I+TI+ +P
Sbjct: 18 LNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTILQSPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK SQ++ S LDSK+REDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDITDGKDSQVVSNS---LDSKIREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|390601964|gb|EIN11357.1| ribosomal protein S13 [Punctularia strigosozonata HHB-11173 SS5]
Length = 156
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR++NIV KKAD+DLNKRAGE + +E+++++TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYANIVCKKADVDLNKRAGELNSDELERVVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQKDIVDGKNSQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|164429137|ref|XP_956794.2| 40S ribosomal protein S18 [Neurospora crassa OR74A]
gi|336268240|ref|XP_003348885.1| 40S ribosomal protein S18 [Sordaria macrospora k-hell]
gi|157072424|gb|EAA27558.2| 40S ribosomal protein S18 [Neurospora crassa OR74A]
gi|380094144|emb|CCC08361.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 156
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KV+++LT IKG GRR+SN+V KKAD+DL+KRAGE + EE+++I+TIM NP
Sbjct: 18 LNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLSKRAGELTSEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ+DIVDGK SQIL +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 AYKIPAWFLNRQRDIVDGKDSQILANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|268534940|ref|XP_002632603.1| C. briggsae CBR-RPS-18 protein [Caenorhabditis briggsae]
Length = 154
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG RKV FALTAIKG GRRF+ + +KADID+NKRAGE +EE+ DKI+TIM NP
Sbjct: 16 MNTNIDGNRKVPFALTAIKGVGRRFAFVCCRKADIDVNKRAGELTEEDFDKIVTIMQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDI DGK Q+L T+ +D+KLREDLER+KKIR HRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDIKDGKTGQLLSTA---VDNKLREDLERMKKIRLHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGVSKKK
Sbjct: 133 GQHTKTTGRKGRTVGVSKKK 152
>gi|449443847|ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
gi|449525091|ref|XP_004169553.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
Length = 152
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE + E+D ++ ++ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|13877525|gb|AAK43840.1|AF370463_1 S18.A ribosomal protein [Arabidopsis thaliana]
gi|17978783|gb|AAL47385.1| S18.A ribosomal protein [Arabidopsis thaliana]
Length = 152
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRR +NIV KK D+D+NKRAGE S E+D ++TI+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRLANIVCKKTDVDMNKRAGELSAAEIDNLMTIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|403419670|emb|CCM06370.1| predicted protein [Fibroporia radiculosa]
Length = 156
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR+SNIV KKAD+DLNKRAGE + +E+++++TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYSNIVCKKADVDLNKRAGELNSDELERLVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQRDIVDGKNSQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|451845394|gb|EMD58707.1| hypothetical protein COCSADRAFT_165512 [Cochliobolus sativus
ND90Pr]
Length = 165
Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT I G GRR+SN+V KKAD+DL KRAG+ + EE+++I+TI+ NP
Sbjct: 28 LNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLTKRAGDLTSEELERIVTIIQNPL 87
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL A SKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 88 QYKIPSWFLNRQRDIVDGKNSQILANGVA---SKLREDLERLKKIRAHRGLRHYWGLRVR 144
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 145 GQHSKTTGRRGRTVGVSKKK 164
>gi|242211468|ref|XP_002471572.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R]
gi|220729344|gb|EED83220.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R]
Length = 156
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + +E+++++TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERLVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DIVDGK SQIL S +DSK+R+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQRDIVDGKNSQILSNS---VDSKIRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|116207686|ref|XP_001229652.1| 40S ribosomal protein S18 [Chaetomium globosum CBS 148.51]
gi|88183733|gb|EAQ91201.1| hypothetical protein CHGG_03136 [Chaetomium globosum CBS 148.51]
Length = 156
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KV+++LT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++++TI+ NP
Sbjct: 18 LNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERLVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ+DIVDGK SQIL +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 AYKIPSWFLNRQRDIVDGKDSQILANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|358366500|dbj|GAA83121.1| ribosomal protein S13p/S18e [Aspergillus kawachii IFO 4308]
Length = 155
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL+KRAGE + EE+++I+TI+ P
Sbjct: 18 LNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTILQAPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK SQ++ S LDSK+REDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDITDGKDSQVVSNS---LDSKIREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|396489279|ref|XP_003843065.1| hypothetical protein LEMA_P088250.1 [Leptosphaeria maculans JN3]
gi|312219643|emb|CBX99586.1| hypothetical protein LEMA_P088250.1 [Leptosphaeria maculans JN3]
Length = 233
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT I G GRR+SN+V KKAD+DL+KRAG+ + EE+++++TI+ NP
Sbjct: 96 LNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTIIQNPL 155
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL A SKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 156 QYKIPAWFLNRQRDIVDGKNSQILANGVA---SKLRDDLERLKKIRAHRGLRHYWGLRVR 212
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 213 GQHSKTTGRRGRTVGVSKKK 232
>gi|449546467|gb|EMD37436.1| hypothetical protein CERSUDRAFT_114091 [Ceriporiopsis subvermispora
B]
Length = 156
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR+SNIV KKAD+DLNKRAGE + +E+++++TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYSNIVCKKADVDLNKRAGELNSDELERLVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DIVDGK SQIL + +DSK+R+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQRDIVDGKNSQIL---SNAVDSKIRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|351726244|ref|NP_001236608.1| uncharacterized protein LOC100500087 [Glycine max]
gi|255629053|gb|ACU14871.1| unknown [Glycine max]
Length = 152
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFA+T+IKG GRRF+NI KKAD+D+NKRAGE S E+D ++T++ NPR
Sbjct: 16 LNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELSAAELDSVMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|310798436|gb|EFQ33329.1| ribosomal protein S13/S18 [Glomerella graminicola M1.001]
Length = 156
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G+ KVM+ALT I G GRR+SNIV KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL A SKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPGWFLNRQRDIVDGKDSQILANGVA---SKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|336371863|gb|EGO00203.1| hypothetical protein SERLA73DRAFT_135921 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384613|gb|EGO25761.1| hypothetical protein SERLADRAFT_388198 [Serpula lacrymans var.
lacrymans S7.9]
Length = 156
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR+SN+V KKAD+DLNKRAG+ + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGDLNSDELERIVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQKDIVDGKNSQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|308450179|ref|XP_003088206.1| hypothetical protein CRE_02774 [Caenorhabditis remanei]
gi|308461679|ref|XP_003093129.1| hypothetical protein CRE_12287 [Caenorhabditis remanei]
gi|308248781|gb|EFO92733.1| hypothetical protein CRE_02774 [Caenorhabditis remanei]
gi|308250761|gb|EFO94713.1| hypothetical protein CRE_12287 [Caenorhabditis remanei]
Length = 154
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG RKV +ALTAIKG GRRF+ + +KAD+D+NKRAGE SEE+ DKI+TIM NP
Sbjct: 16 MNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELSEEDFDKIVTIMQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDI DGK Q+L T+ +D+KLREDLER+KKIR HRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDIKDGKTGQLLSTA---VDNKLREDLERMKKIRLHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGVSKKK
Sbjct: 133 GQHTKTTGRKGRTVGVSKKK 152
>gi|340959627|gb|EGS20808.1| putative ribosomal protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 156
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KV++ALT IKG GRR+SN+V KKAD+DL KRAGE + EE+++++TI+ NP
Sbjct: 18 LNTNVDGKQKVVYALTQIKGVGRRYSNLVCKKADVDLKKRAGELTSEELERLVTIIQNPL 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ+DIVDGK SQIL +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 AYKIPTWFLNRQRDIVDGKDSQILANG---VDSKLREDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|384484079|gb|EIE76259.1| 40S ribosomal protein S18 [Rhizopus delemar RA 99-880]
gi|384491284|gb|EIE82480.1| 40S ribosomal protein S18 [Rhizopus delemar RA 99-880]
gi|384491986|gb|EIE83182.1| 40S ribosomal protein S18 [Rhizopus delemar RA 99-880]
gi|384498402|gb|EIE88893.1| 40S ribosomal protein S18 [Rhizopus delemar RA 99-880]
Length = 154
Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ K+ ALT++KG GRRF+NI KKADIDL KRAGE S EE+++I+TI+ NP
Sbjct: 18 LNTNVDGRVKIQIALTSVKGVGRRFANIACKKADIDLTKRAGELSSEELERIVTILQNPA 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDIVDGK SQ++ + LD+K REDLERLKKIRAHRG+RHYWG+RVR
Sbjct: 78 QYKIPNWFLNRQKDIVDGKSSQVI---SNVLDTKYREDLERLKKIRAHRGLRHYWGVRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|169598492|ref|XP_001792669.1| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15]
gi|160704404|gb|EAT90262.2| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15]
Length = 155
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DL KRAG+ + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLGKRAGDLTSEELERIVTIIQNPL 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ L +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKNSQTLANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|346469937|gb|AEO34813.1| hypothetical protein [Amblyomma maculatum]
Length = 152
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S E++ ++TI+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMTIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDYKDGRYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|395332737|gb|EJF65115.1| ribosomal protein S13 [Dichomitus squalens LYAD-421 SS1]
Length = 156
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR++N+V KKAD+DLNKRAGE + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQRDIVDGKNSQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|409044875|gb|EKM54356.1| hypothetical protein PHACADRAFT_258160 [Phanerochaete carnosa
HHB-10118-sp]
Length = 156
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRKVM+ALT IKG GRR++NIV KKAD+DLNKRAGE + +E+++++TI+ NP
Sbjct: 19 LNTNVDGKRKVMYALTEIKGVGRRYANIVCKKADVDLNKRAGELNSDELERLVTIIQNPL 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+P WFLNRQ+DIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKVPTWFLNRQRDIVDGKTSQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|393230344|gb|EJD37951.1| ribosomal protein S13 [Auricularia delicata TFB-10046 SS5]
Length = 156
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRKVM+ALT IKG GRR++NIV KKAD+DLNKRAG+ + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKRKVMYALTEIKGVGRRYANIVCKKADVDLNKRAGDLNSDELERIVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDIVDGK SQ L S A +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQKDIVDGKNSQ--LVSNA-VDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|380493840|emb|CCF33588.1| 40S ribosomal protein S18 [Colletotrichum higginsianum]
Length = 156
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G+ KVM+ALT I G GRR+SNIV KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVRGQEKVMYALTKIGGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL A SKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPGWFLNRQRDIVDGKDSQILANGVA---SKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|429863445|gb|ELA37896.1| 40s ribosomal protein s18 [Colletotrichum gloeosporioides Nara gc5]
Length = 156
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G+ KVM+ALT I G GRR+SNIV KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVRGQEKVMYALTKIGGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL A SKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPAWFLNRQRDIVDGKDSQILANGVA---SKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|351724973|ref|NP_001238100.1| uncharacterized protein LOC100306646 [Glycine max]
gi|255629171|gb|ACU14930.1| unknown [Glycine max]
Length = 152
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFA+T+IKG GRRF+NI KKAD+D+NKRAGE + E+D ++T++ NPR
Sbjct: 16 LNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELTAAELDSVMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|226504536|ref|NP_001151612.1| 40S ribosomal protein S18 [Zea mays]
gi|242032711|ref|XP_002463750.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor]
gi|194708790|gb|ACF88479.1| unknown [Zea mays]
gi|195605976|gb|ACG24818.1| 40S ribosomal protein S18 [Zea mays]
gi|195618188|gb|ACG30924.1| 40S ribosomal protein S18 [Zea mays]
gi|195620216|gb|ACG31938.1| 40S ribosomal protein S18 [Zea mays]
gi|195648096|gb|ACG43516.1| 40S ribosomal protein S18 [Zea mays]
gi|238008500|gb|ACR35285.1| unknown [Zea mays]
gi|241917604|gb|EER90748.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor]
gi|414873322|tpg|DAA51879.1| TPA: 40S ribosomal protein S18 [Zea mays]
Length = 152
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFA+T+IKG GRRFSNIV KKADID+NKRAGE + EE+++++T++ NPR
Sbjct: 16 LNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPEELERLMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|351725877|ref|NP_001235572.1| uncharacterized protein LOC100306474 [Glycine max]
gi|255628659|gb|ACU14674.1| unknown [Glycine max]
Length = 152
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRFSNI KKAD+D+NKRAGE S E+D ++T++ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFSNICCKKADVDMNKRAGELSAAELDSVMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q KIPDWFLNR+KD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QLKIPDWFLNRKKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|189208913|ref|XP_001940789.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976882|gb|EDU43508.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 155
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT I G GRR+SN+V KKAD+DL KRAG+ + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLTKRAGDLTSEELERIVTIIQNPL 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ+L A SKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKNSQVLANGVA---SKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|242043060|ref|XP_002459401.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor]
gi|241922778|gb|EER95922.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor]
Length = 152
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFA+T+IKG GRRFSNIV KKADID+NKRAGE S +E+++++T++ NPR
Sbjct: 16 LNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELSSDELERLMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|255946732|ref|XP_002564133.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591150|emb|CAP97376.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 155
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL KRAGE + EE+++I+TI+ P
Sbjct: 18 LNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERIVTILQTPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK +Q++ + LDSKLREDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDITDGKDTQVV---SNGLDSKLREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|17542018|ref|NP_502794.1| Protein RPS-18 [Caenorhabditis elegans]
gi|3881192|emb|CAB16517.1| Protein RPS-18 [Caenorhabditis elegans]
Length = 154
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG RKV +ALTAIKG GRRF+ + +KAD+D+NKRAGE +EE+ DKI+TIM NP
Sbjct: 16 MNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELTEEDFDKIVTIMQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDI DGK Q+L T+ +D+KLREDLER+KKIR HRG+RHYWGLRVR
Sbjct: 76 QYKIPNWFLNRQKDIKDGKTGQLLSTA---VDNKLREDLERMKKIRLHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGVSKKK
Sbjct: 133 GQHTKTTGRKGRTVGVSKKK 152
>gi|40287492|gb|AAR83860.1| putative ribosomal protein [Capsicum annuum]
Length = 152
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/139 (73%), Positives = 122/139 (87%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DGK+K+MFA+T+IKG GRRF+NI KKADID+NKRAGE S E+D ++ ++ NPRQ
Sbjct: 17 NTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMNKRAGELSAAELDSLMVVVANPRQ 76
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+KIPDWFLNRQKD DGK+SQ+ TS A LD KLR+DLERLKKIR HRG+RHYWGLRVRG
Sbjct: 77 FKIPDWFLNRQKDYKDGKFSQV--TSNA-LDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRG+TVGVSKK+
Sbjct: 134 QHTKTTGRRGKTVGVSKKR 152
>gi|425768526|gb|EKV07047.1| Ribosomal protein S13p/S18e [Penicillium digitatum PHI26]
gi|425775668|gb|EKV13924.1| Ribosomal protein S13p/S18e [Penicillium digitatum Pd1]
Length = 155
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL KRAGE + EE+++I+TI+ P
Sbjct: 18 LNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERIVTILQTPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK +Q++ + LDSKLREDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDITDGKDTQVV---SNGLDSKLREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|356499364|ref|XP_003518511.1| PREDICTED: 40S ribosomal protein S18-like [Glycine max]
Length = 152
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NI KKAD+D+NKRAGE S E+D ++T++ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANICCKKADVDMNKRAGELSAIELDSVMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|296081217|emb|CBI18243.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S E++ ++ I+ NPR
Sbjct: 58 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVANPR 117
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 118 QFKIPDWFLNRKKDYKDGRYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 174
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 175 GQHTKTTGRRGKTVGVSKKR 194
>gi|115455881|ref|NP_001051541.1| Os03g0794700 [Oryza sativa Japonica Group]
gi|297606796|ref|NP_001059007.2| Os07g0173700 [Oryza sativa Japonica Group]
gi|25553579|dbj|BAC24844.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
gi|28269440|gb|AAO37983.1| putative ribosomal protein S18A [Oryza sativa Japonica Group]
gi|50400039|gb|AAT76427.1| putative ribosomal protein S18A [Oryza sativa Japonica Group]
gi|50509329|dbj|BAD30787.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
gi|108711530|gb|ABF99325.1| 40S ribosomal protein S18, putative, expressed [Oryza sativa
Japonica Group]
gi|113550012|dbj|BAF13455.1| Os03g0794700 [Oryza sativa Japonica Group]
gi|125557400|gb|EAZ02936.1| hypothetical protein OsI_25076 [Oryza sativa Indica Group]
gi|215765128|dbj|BAG86825.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765330|dbj|BAG87027.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636521|gb|EEE66653.1| hypothetical protein OsJ_23275 [Oryza sativa Japonica Group]
gi|255677547|dbj|BAF20921.2| Os07g0173700 [Oryza sativa Japonica Group]
Length = 152
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRFSNI KKADID+NKRAGE + EE+++++T++ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELTPEELERLMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|392569876|gb|EIW63049.1| ribosomal protein S13 [Trametes versicolor FP-101664 SS1]
Length = 156
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR++N+V KKAD+DLNKRAGE + +E+++++TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERLVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQRDIVDGKNSQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|356534043|ref|XP_003535567.1| PREDICTED: 40S ribosomal protein S18-like [Glycine max]
Length = 207
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFA+T+IKG GRRF+NI KKAD+D+NKRAGE + E+D ++T++ NPR
Sbjct: 71 LNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELTAAELDSVMTVVANPR 130
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP+WFLNR+KD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 131 QFKIPNWFLNRKKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 187
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 188 GQHTKTTGRRGKTVGVSKKR 207
>gi|402906942|ref|XP_003916239.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Papio anubis]
gi|402906944|ref|XP_003916240.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Papio anubis]
gi|402906946|ref|XP_003916241.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Papio anubis]
Length = 152
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK FA+TAIKG G R+++ VL+KAD+DL KRAGE +EEEV+++IT+ NPR
Sbjct: 16 LNTNIDGRRKTAFAITAIKGVGGRYAHAVLRKADVDLTKRAGELTEEEVERVITLTQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIR HRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRGHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT+T GRRG TVGVSKKK
Sbjct: 133 GQHTETVGRRGLTVGVSKKK 152
>gi|299751837|ref|XP_002911694.1| 40S ribosomal protein S18 [Coprinopsis cinerea okayama7#130]
gi|298409557|gb|EFI28200.1| 40s ribosomal protein [Coprinopsis cinerea okayama7#130]
Length = 156
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR++N+V KKAD+DLNKRAGE + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDIVDGK QIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QFKIPTWFLNRQKDIVDGKNYQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|355703957|gb|EHH30448.1| hypothetical protein EGK_11121 [Macaca mulatta]
Length = 152
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK FA+TAIKG G R+++ VL+KADIDL KRAGE +EEEV+++IT+ NPR
Sbjct: 16 LNTNIDGRRKTAFAITAIKGVGGRYAHAVLRKADIDLTKRAGELTEEEVERVITLTQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+ H+WGLRV+
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLCHFWGLRVQ 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG TVGVSKKK
Sbjct: 133 GQHTKTTGRRGLTVGVSKKK 152
>gi|313103638|pdb|3IZ6|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|22204120|gb|AAM92708.1| putative ribosomal protein S18 [Triticum aestivum]
Length = 152
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRFSNIV KKADID+NKRAGE S EE+D+++ ++ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVVHNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DG++SQ++ + +D KLR+DLERLKKIR HRG+RHYWG+RVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGRFSQVV---SNAVDMKLRDDLERLKKIRNHRGLRHYWGVRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|302410605|ref|XP_003003136.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102]
gi|261358160|gb|EEY20588.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102]
Length = 156
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G+ KVM+ALT I G GRR+SNIV KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL + SKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPGWFLNRQRDIVDGKDSQILANG---VHSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|296085211|emb|CBI28706.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S E++ ++ I+ NPR
Sbjct: 776 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVANPR 835
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 836 QFKIPDWFLNRKKDYKDGRYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 892
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 893 GQHTKTTGRRGKTVGVSKKR 912
>gi|346971140|gb|EGY14592.1| 40S ribosomal protein S18 [Verticillium dahliae VdLs.17]
Length = 156
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G+ KVM+ALT I G GRR+SNIV KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVRGQEKVMYALTKIAGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQIL + SKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPGWFLNRQRDIVDGKDSQILANG---VHSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|212531369|ref|XP_002145841.1| 40S ribosomal protein S18 [Talaromyces marneffei ATCC 18224]
gi|210071205|gb|EEA25294.1| ribosomal protein S13p/S18e [Talaromyces marneffei ATCC 18224]
Length = 155
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL+KRAG+ + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK +Q++ + +DSKLREDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPAWFLNRQRDITDGKDTQVI---SNGVDSKLREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|367049492|ref|XP_003655125.1| 40S ribosomal protein S18 [Thielavia terrestris NRRL 8126]
gi|347002389|gb|AEO68789.1| hypothetical protein THITE_2118432 [Thielavia terrestris NRRL 8126]
Length = 156
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KV+++LT IKG GRR+SN+V KKAD+DL KRAGE + EE+++++TI+ NP
Sbjct: 18 LNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLKKRAGELTSEELERLVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ+DIVDGK SQIL + +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 AYKIPTWFLNRQRDIVDGKDSQILANN---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|357111491|ref|XP_003557546.1| PREDICTED: 40S ribosomal protein S18-like [Brachypodium distachyon]
Length = 152
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRFSNIV KKADID+NKRAGE + EE+D+++ ++ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAGELTPEELDRLMHVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWG+RVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGVRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|25553581|dbj|BAC24846.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
gi|50509331|dbj|BAD30789.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
gi|125599284|gb|EAZ38860.1| hypothetical protein OsJ_23277 [Oryza sativa Japonica Group]
Length = 148
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 125/140 (89%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRFSNI KKADID+NKRAGE + EE+++++T++ NPR
Sbjct: 12 LNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELERLMTVVANPR 71
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 72 QFKVPDWFLNRKKDYKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 128
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 129 GQHTKTTGRRGKTVGVSKKR 148
>gi|225432662|ref|XP_002282412.1| PREDICTED: 40S ribosomal protein S18-like [Vitis vinifera]
gi|225460586|ref|XP_002262702.1| PREDICTED: 40S ribosomal protein S18-like [Vitis vinifera]
gi|359479621|ref|XP_003632303.1| PREDICTED: 40S ribosomal protein S18-like [Vitis vinifera]
Length = 152
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S E++ ++ I+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDYKDGRYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|357443543|ref|XP_003592049.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|357443553|ref|XP_003592054.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|217075242|gb|ACJ85981.1| unknown [Medicago truncatula]
gi|355481097|gb|AES62300.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|355481102|gb|AES62305.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|388517109|gb|AFK46616.1| unknown [Medicago truncatula]
Length = 152
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+ FA+T+IKG GRRF+NI KKAD+D+NKRAGE S E+D I+T++ NPR
Sbjct: 16 LNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELSAAELDNIMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DGK+SQ++ + QLD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGKFSQVV---SNQLDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|330932805|ref|XP_003303916.1| 40S ribosomal protein S18 [Pyrenophora teres f. teres 0-1]
gi|311319761|gb|EFQ87978.1| hypothetical protein PTT_16318 [Pyrenophora teres f. teres 0-1]
Length = 155
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT I G GRR+SN+V KKAD+DL+KRAG+ + EE+++++TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTIIQNPL 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ+L A SKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPSWFLNRQRDIVDGKNSQVLANGVA---SKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|226493800|ref|NP_001141254.1| uncharacterized protein LOC100273341 [Zea mays]
gi|194703562|gb|ACF85865.1| unknown [Zea mays]
gi|195618614|gb|ACG31137.1| 40S ribosomal protein S18 [Zea mays]
gi|402810150|gb|AFR11278.1| ribosomal protein S18 [Zea mays]
gi|413932826|gb|AFW67377.1| 40S ribosomal protein S18 [Zea mays]
Length = 152
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFA+T+IKG GRRFSNIV KKADID+NKRAGE + +E+++++T++ NPR
Sbjct: 16 LNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|355428398|gb|AER92515.1| hypothetical protein, partial [Triatoma rubida]
Length = 119
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/122 (84%), Positives = 116/122 (95%), Gaps = 3/122 (2%)
Query: 19 KGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDG 78
+G GRR++NIVLKKAD++L+KRAGECSEEEV+KIITIM NPRQYKIP+WFLNRQKDIVDG
Sbjct: 1 RGVGRRYANIVLKKADVNLDKRAGECSEEEVEKIITIMQNPRQYKIPNWFLNRQKDIVDG 60
Query: 79 KYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSK 138
K+SQ+ ++A LDSKLR+DLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSK
Sbjct: 61 KFSQL---TSAVLDSKLRDDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSK 117
Query: 139 KK 140
KK
Sbjct: 118 KK 119
>gi|7861934|gb|AAF70446.1|AF210641_1 Ke3 [Danio rerio]
Length = 126
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/129 (77%), Positives = 118/129 (91%), Gaps = 3/129 (2%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+RK+ FA+TAIKG GRR++++VL+KADIDLNKRAGE +E+EV++++TIM NPRQYKIPDW
Sbjct: 1 RRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPRQYKIPDW 60
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
FLNRQKDI DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQHTKTT
Sbjct: 61 FLNRQKDIKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTT 117
Query: 128 GRRGRTVGV 136
GRRGRTVGV
Sbjct: 118 GRRGRTVGV 126
>gi|357111429|ref|XP_003557516.1| PREDICTED: 40S ribosomal protein S18-like [Brachypodium distachyon]
Length = 152
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRR+SNIV KKADID+NKRAGE + EE+D+++ +++NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRYSNIVCKKADIDMNKRAGELTTEELDRLMVVVSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWG+RVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGVRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|440801595|gb|ELR22609.1| ribosomal protein S13p/S18e, putative [Acanthamoeba castellanii
str. Neff]
Length = 162
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGK+K++FALTAIKG GRRF+N+V KKAD+DLNKRAGE S +EVDKI+ I+ +PR
Sbjct: 23 LNTNIDGKQKIVFALTAIKGVGRRFANVVCKKADVDLNKRAGELSNDEVDKIVNIIQHPR 82
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KDI DGKY+Q + LD KLRED ERLK++R HRG+RH+WGLRVR
Sbjct: 83 QFKIPDWFLNRKKDIKDGKYTQ---AYSNILDQKLREDFERLKRMRCHRGLRHFWGLRVR 139
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRT+GVSKK+
Sbjct: 140 GQHTKTTGRKGRTMGVSKKR 159
>gi|302789830|ref|XP_002976683.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii]
gi|300155721|gb|EFJ22352.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii]
Length = 152
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE + E++ ++ I+ NPR
Sbjct: 16 LNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDYKDGRYSQVVANA---LDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKK+
Sbjct: 133 GQHTKTTGRRGRTVGVSKKR 152
>gi|320170357|gb|EFW47256.1| ribosomal protein S18 [Capsaspora owczarzaki ATCC 30864]
Length = 152
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGK K+ FALT IKG GRR+SN+V KKADIDL KRAGE +E EV+++++I+ NPR
Sbjct: 16 LNTNIDGKVKIPFALTKIKGVGRRYSNLVCKKADIDLKKRAGEVNEAEVERLLSILQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPDWFLNRQKDIVDGK SQ+L + LD+KLRED+ERLKKIRAHRG+RHYWG+RVR
Sbjct: 76 SYKIPDWFLNRQKDIVDGKTSQVL---SNGLDNKLREDIERLKKIRAHRGLRHYWGVRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR GRTVGV KK
Sbjct: 133 GQHTKTTGRHGRTVGVGAKK 152
>gi|171686194|ref|XP_001908038.1| hypothetical protein [Podospora anserina S mat+]
gi|170943058|emb|CAP68711.1| unnamed protein product [Podospora anserina S mat+]
Length = 219
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KV+++LT IKG GRR+SN+V KKAD+DL KRAGE + EE+++++TI+ NP
Sbjct: 81 LNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLKKRAGELTSEELERLVTIIQNPT 140
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ+DIVDGK SQIL +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 141 AYKIPAWFLNRQRDIVDGKDSQILANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 197
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 198 GQHTKTTGRRGRTVGVSKKK 217
>gi|27671346|ref|XP_234780.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
gi|109482109|ref|XP_001058023.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
Length = 152
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFL+RQKD+ DGKYSQ+L LD+KL EDLERLKKIRAHRG+RH+W LRV
Sbjct: 76 QYKIPDWFLDRQKDVKDGKYSQVLAKG---LDNKLHEDLERLKKIRAHRGLRHFWDLRVG 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRG TVGVSKKK
Sbjct: 133 GQHSKTTGRRGHTVGVSKKK 152
>gi|341902537|gb|EGT58472.1| hypothetical protein CAEBREN_32864, partial [Caenorhabditis
brenneri]
Length = 151
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG RKV +ALTAIKG GRRF+ + +KADID+NKRAGE +EE+ DKI+TIM NP
Sbjct: 13 INTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADIDVNKRAGELAEEDFDKIVTIMQNPS 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP+WFLNRQKDI DGK Q+ T+ +D+KLREDLER+KKIR HRG+RHYWGLRVR
Sbjct: 73 QYKIPNWFLNRQKDIKDGKTGQLFSTA---VDNKLREDLERMKKIRLHRGLRHYWGLRVR 129
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR+GRTVGVSKKK
Sbjct: 130 GQHTKTTGRKGRTVGVSKKK 149
>gi|148679456|gb|EDL11403.1| mCG9349 [Mus musculus]
Length = 143
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 98/131 (74%), Positives = 119/131 (90%), Gaps = 3/131 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +++EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTQDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVR 132
Query: 121 GQHTKTTGRRG 131
GQHTKTTGRRG
Sbjct: 133 GQHTKTTGRRG 143
>gi|388510472|gb|AFK43302.1| unknown [Lotus japonicus]
Length = 152
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NI KKAD+D+NKRAGE S E+D ++T++ NP+
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANICCKKADVDMNKRAGELSAAELDNVMTVVANPK 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DGKY Q++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDYKDGKYHQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|403162357|ref|XP_003322588.2| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172573|gb|EFP78169.2| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 155
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ K+MFALT I+G GRR +N+ KKAD+DLNKRAGE + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTIIQNPA 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DIVDGK Q+L + LDSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 79 QFKIPAWFLNRQRDIVDGKSYQVL---SNGLDSKLREDLERLKKIRAHRGLRHYWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKKK
Sbjct: 136 GQHTKTTGRRGKTVGVSKKK 155
>gi|76573321|gb|ABA46765.1| unknown [Solanum tuberosum]
Length = 152
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 122/139 (87%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DGK+K+MFA+T+IKG GRRF+NI KKADID++KRAGE + E+D ++ ++ NPRQ
Sbjct: 17 NTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMSKRAGELTAAELDSLMVVVANPRQ 76
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+KIPDWFLNRQKD DGK+SQ+ TS A LD KLR+DLERLKKIR HRG+RHYWGLRVRG
Sbjct: 77 FKIPDWFLNRQKDYKDGKFSQV--TSNA-LDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRG+TVGVSKK+
Sbjct: 134 QHTKTTGRRGKTVGVSKKR 152
>gi|452845135|gb|EME47068.1| hypothetical protein DOTSEDRAFT_165834 [Dothistroma septosporum
NZE10]
Length = 155
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 120/140 (85%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT I G GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKQKVMYALTKISGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIV GK Q+L SKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 78 QYKIPTWFLNRQRDIVTGKDEQVLANGVY---SKLRDDLERLKKIRAHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 135 GQHSKTTGRRGRTVGVSKKK 154
>gi|393217140|gb|EJD02629.1| 40s ribosomal protein [Fomitiporia mediterranea MF3/22]
Length = 156
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR+SNIV KKAD+DL+KRAG+ + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYSNIVCKKADVDLSKRAGDLNSDELERIVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQKDI DGK QIL + +DSKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QYKIPVWFLNRQKDINDGKNYQIL---SNNVDSKLRDDLERLKKIRAHRGLRHFWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|332226938|ref|XP_003262646.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Nomascus
leucogenys]
gi|441661939|ref|XP_004091555.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Nomascus
leucogenys]
gi|441661945|ref|XP_004091556.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Nomascus
leucogenys]
Length = 152
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NP
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+YKIPDWFLN+QKD+ DGKYSQ+L LD+KLREDLE+LKKI AHRG+ H+ GLRVR
Sbjct: 76 RYKIPDWFLNKQKDVKDGKYSQVLANG---LDNKLREDLEQLKKIPAHRGLSHFRGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKT GRRGRTVGVSKKK
Sbjct: 133 GQHTKTAGRRGRTVGVSKKK 152
>gi|328852742|gb|EGG01885.1| hypothetical protein MELLADRAFT_91715 [Melampsora larici-populina
98AG31]
Length = 156
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ K+MFALT I+G GRR +N+ KKAD+DLNKRAGE + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTIIQNPA 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP+WFLNRQ+DIVDGK Q+L + LDSK+REDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 79 QFKIPNWFLNRQRDIVDGKSFQVL---SNGLDSKMREDLERLKKIRAHRGLRHYWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|114669049|ref|XP_511822.2| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Pan
troglodytes]
gi|410051833|ref|XP_003953174.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Pan
troglodytes]
Length = 152
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+ FA+TAIKG GRR++++VL+KADIDL KRAGE E+EV++++TIM NPR
Sbjct: 16 LNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELIEDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKY+Q+L LD++LREDLERLKKIRAHRG+ H+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYNQVLANG---LDNELREDLERLKKIRAHRGLSHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
G+HTKTTG RGRTV VSKKK
Sbjct: 133 GRHTKTTGCRGRTVSVSKKK 152
>gi|357444479|ref|XP_003592517.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|355481565|gb|AES62768.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|388508396|gb|AFK42264.1| unknown [Medicago truncatula]
Length = 152
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+ FA+T+IKG GRRF+NI KKAD+D+NKRAGE + E++ I+T++ NPR
Sbjct: 16 LNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELTAAELENIMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DGK+SQ++ + QLD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGKFSQVV---SNQLDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|389741924|gb|EIM83112.1| 40s ribosomal protein [Stereum hirsutum FP-91666 SS1]
Length = 156
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT IKG GRR+SN+V KKAD+DLNKRAGE + +E+++++TI+ NP
Sbjct: 19 LNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERLVTIIQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DIVDGK Q+L + +DSKLR+DLERLKKIRAHRG+RH WGLRVR
Sbjct: 79 QFKIPTWFLNRQRDIVDGKNFQVL---SNGVDSKLRDDLERLKKIRAHRGLRHSWGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|388497376|gb|AFK36754.1| unknown [Lotus japonicus]
Length = 152
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NI KK D+D+NKRAGE S E+D ++T++ NP+
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANICCKKTDVDMNKRAGELSAAELDNVMTVVANPK 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DGKY Q++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDYKDGKYHQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|168024894|ref|XP_001764970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683779|gb|EDQ70186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 152
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++K+MFALT+IKG GRRF+N+V KKAD+D++KRAGE S E++ ++ I+ NPR
Sbjct: 16 LNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDHKDGRYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKK+
Sbjct: 133 GQHTKTTGRRGRTVGVSKKR 152
>gi|345563888|gb|EGX46871.1| hypothetical protein AOL_s00097g297 [Arthrobotrys oligospora ATCC
24927]
Length = 156
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 120/140 (85%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+A+T I G GRR+SN+V KKADIDL KRAGE + EE+++IITI+ +P
Sbjct: 18 LNTNVDGKQKVMYAMTKIGGVGRRYSNLVCKKADIDLTKRAGELTTEELERIITIIQDPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ+DIVDGK SQIL L SKLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 78 AYKIPSWFLNRQRDIVDGKNSQILANG---LQSKLRDDLERLKKIRCHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|353236531|emb|CCA68524.1| probable RPS18A-ribosomal protein S18.e.c4 [Piriformospora indica
DSM 11827]
Length = 157
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRKV +ALT IKG GRR++NIV KKADIDL KRAGE + +E+++I+ IM NP
Sbjct: 20 LNTNVDGKRKVQYALTEIKGVGRRYANIVCKKADIDLKKRAGELNSDELERIVNIMQNPT 79
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDI DGKY Q+L + +DSKLR+DLERLKKIRAHRG+RH+WG RVR
Sbjct: 80 QFKIPLWFLNRQKDITDGKYGQLL---SNAVDSKLRDDLERLKKIRAHRGLRHFWGTRVR 136
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 137 GQHTKTTGRRGKTVGVSKKR 156
>gi|217071380|gb|ACJ84050.1| unknown [Medicago truncatula]
Length = 152
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+ FA+T+IKG GRRF+NI KKAD+D+NKRAGE + E++ I+T++ NPR
Sbjct: 16 LNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELTVAELENIMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DGK+SQ++ + QLD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKVPDWFLNRKKDYKDGKFSQVV---SNQLDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|115390150|ref|XP_001212580.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624]
gi|114194976|gb|EAU36676.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624]
Length = 155
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DL KRAGE + EE+++++TI+ NP
Sbjct: 18 LNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERVVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK + +L + +D K REDLERLKKIR+HRG+RHYWGLRVR
Sbjct: 78 QYKIPAWFLNRQRDITDGKDAHVL---SNGVDQKAREDLERLKKIRSHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|168004046|ref|XP_001754723.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168049271|ref|XP_001777087.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168052464|ref|XP_001778670.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669988|gb|EDQ56565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671530|gb|EDQ58080.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694344|gb|EDQ80693.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 152
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++K+MFALT+IKG GRRF+N+V KKAD+D++KRAGE S E++ ++ I+ NPR
Sbjct: 16 LNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDHKDGRYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKK+
Sbjct: 133 GQHTKTTGRRGRTVGVSKKR 152
>gi|168004052|ref|XP_001754726.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694347|gb|EDQ80696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 152
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++K+MFALT+IKG GRRF+N+V KKAD+D++KRAGE S E++ ++ I+ NPR
Sbjct: 16 LNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+K+PDWFLNR+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKVPDWFLNRKKDHKDGRYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKK+
Sbjct: 133 GQHTKTTGRRGRTVGVSKKR 152
>gi|388492744|gb|AFK34438.1| unknown [Lotus japonicus]
Length = 152
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NI KKAD+D+NKRAGE S E+D ++T++ NP+
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRFANICCKKADVDMNKRAGELSAAELDNVMTVVANPK 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DGKY Q++ + LD KLR+DLERLKKIR HRG+RHYWGLR R
Sbjct: 76 QFKIPDWFLNRKKDYKDGKYHQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRGR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|384251158|gb|EIE24636.1| ribosomal protein S18 component of cytosolic 80S ribosome and 40S
small subunit [Coccomyxa subellipsoidea C-169]
Length = 153
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALTAI+G GRRFSNI KKA++D+ KRAGE S E+++++ I+ NPR
Sbjct: 17 LNTNVDGKQKIMFALTAIRGIGRRFSNIACKKAEVDMRKRAGELSAAELEQLMVIVANPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+KIPDWFLNRQKD DGK SQ LTS+A LD+KLREDLERLKKIR HRG+RHYWGLRV+
Sbjct: 77 TFKIPDWFLNRQKDHKDGKNSQ--LTSSA-LDTKLREDLERLKKIRNHRGLRHYWGLRVK 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGV+KK+
Sbjct: 134 GQHTKTTGRRGRTVGVAKKR 153
>gi|168049335|ref|XP_001777119.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671562|gb|EDQ58112.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 152
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++K+MFALT+IKG GRRF+N+V KKAD+D++KRAGE S E++ ++ I+ NPR
Sbjct: 16 LNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRKKDHKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKK+
Sbjct: 133 GQHTKTTGRRGRTVGVSKKR 152
>gi|402224403|gb|EJU04466.1| 40s ribosomal protein [Dacryopinax sp. DJM-731 SS1]
Length = 156
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRKV +ALT IKG GRR++N+V KKAD+DL KRAGE + +E+++I+TIM NP
Sbjct: 19 LNTNVDGKRKVQYALTEIKGVGRRYANVVCKKADVDLKKRAGELNSDELERIVTIMQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDI DGK QIL + +DSKLR+DLERLKKIRAHRG+RH+WG+RVR
Sbjct: 79 QFKIPTWFLNRQKDITDGKNLQIL---SNGVDSKLRDDLERLKKIRAHRGLRHFWGVRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 136 GQHTKTTGRRGKTVGVSKKR 155
>gi|442762097|gb|JAA73207.1| Putative ribosomal protein s18, partial [Ixodes ricinus]
Length = 156
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/123 (81%), Positives = 115/123 (93%), Gaps = 3/123 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKVMFALTAIKG GRRFSN+V KKAD+DLNKRAGE +EEEV+K+ITIM+NPR
Sbjct: 23 LNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIMSNPR 82
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGK+SQ+ TS A L++KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 83 QYKIPDWFLNRQKDIKDGKFSQV--TSNA-LENKLREDLERLKKIRAHRGLRHFWGLRVR 139
Query: 121 GQH 123
GQH
Sbjct: 140 GQH 142
>gi|56754053|gb|AAW25217.1| unknown [Schistosoma japonicum]
Length = 149
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 124/139 (89%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNI G+ K+M+A+T+I+G G R++N+V KKADI L KRAGE +++EV+K++ +M+NP Q
Sbjct: 14 NTNIGGQLKIMYAITSIRGVGSRYANVVGKKADIALTKRAGELTDDEVEKLVPVMSNPSQ 73
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YKIPDWFLNRQKD+ DGK+SQ++ +A L++KLREDLERLK+IR+HRG+RHYWGLRVRG
Sbjct: 74 YKIPDWFLNRQKDVDDGKHSQLM---SAALETKLREDLERLKRIRSHRGIRHYWGLRVRG 130
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRGRTVGVS+KK
Sbjct: 131 QHTKTTGRRGRTVGVSRKK 149
>gi|328874052|gb|EGG22418.1| protein serine/threonine phosphatase [Dictyostelium fasciculatum]
Length = 2108
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 98/139 (70%), Positives = 117/139 (84%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN++GKRKVM+ALT +KGCGRRF+N+V KKADID +KRAGE S E++++ TIM +PRQ
Sbjct: 394 NTNVEGKRKVMYALTDVKGCGRRFANLVCKKADIDFSKRAGELSPAEIERVTTIMNHPRQ 453
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP WFLNRQ+DIVDGKY Q L + LD KLREDLERLKKIR RG+RH+ GL+VRG
Sbjct: 454 YNIPSWFLNRQRDIVDGKYMQAL---SNVLDIKLREDLERLKKIRCQRGIRHHLGLKVRG 510
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TKTTGRRGRTVGV+KKK
Sbjct: 511 QKTKTTGRRGRTVGVAKKK 529
>gi|294463827|gb|ADE77437.1| unknown [Picea sitchensis]
Length = 152
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++K+MFALT+IKG GRRF+N+V KKAD+D+NKRAGE S E++ ++TI++NP+
Sbjct: 16 LNTNVDGRQKIMFALTSIKGIGRRFANLVCKKADVDMNKRAGELSAAELENLMTIVSNPK 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP+WFLNRQKD DG+ +Q L S A LD +LR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPEWFLNRQKDYKDGRTNQ--LVSNA-LDMRLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|302829312|ref|XP_002946223.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
gi|300269038|gb|EFJ53218.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
carteri f. nagariensis]
Length = 153
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK K+M+A+TAIKG GRRFSN+V KKA++DL KRAGECS +E+++++ I+ NPR
Sbjct: 17 LNTNVDGKNKIMYAMTAIKGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIVANPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPDWFLNRQKD G+YSQ+ +++ LD+ LR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 77 AYKIPDWFLNRQKDHKTGRYSQL---TSSGLDTALRDDLERLKKIRNHRGLRHYWGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G+TVGV+KKK
Sbjct: 134 GQHTKTTGRAGKTVGVAKKK 153
>gi|167527167|ref|XP_001747916.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773665|gb|EDQ87303.1| predicted protein [Monosiga brevicollis MX1]
Length = 154
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 120/140 (85%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNI G R +M+A+TAIKG GRR+SN+ LKKA+I +RAGE +E++V +++TIM NPR
Sbjct: 16 MNTNIAGDRNIMYAMTAIKGVGRRYSNLCLKKAEISTRRRAGELTEDDVRRVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNR+KDI DG YSQ+L + L+ KLR+DLER+KKIR HRG+RHYWG+RVR
Sbjct: 76 QYKIPDWFLNRKKDIKDGTYSQLL---ASDLNVKLRDDLERMKKIRLHRGIRHYWGVRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|281211011|gb|EFA85177.1| 40S ribosomal protein S18 [Polysphondylium pallidum PN500]
Length = 154
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/139 (72%), Positives = 119/139 (85%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DG+RK+M+ALT +KG GRRF+N+V KKAD+DL KRAGE S++EV+++ TI+ +PRQ
Sbjct: 17 NTNVDGRRKIMYALTNVKGIGRRFANLVCKKADVDLQKRAGELSKDEVERLTTILNHPRQ 76
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP WFLNRQKDI DGKYSQ L QLD K REDLERLKKIRAHRG+RH+ GLRVRG
Sbjct: 77 YNIPAWFLNRQKDIKDGKYSQAL---ANQLDVKYREDLERLKKIRAHRGIRHHMGLRVRG 133
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TKTTGRRGRTVGVSKKK
Sbjct: 134 QKTKTTGRRGRTVGVSKKK 152
>gi|160550173|gb|ABX44791.1| putative 40S ribosomal protein RPS18 [Flustra foliacea]
Length = 152
Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 120/140 (85%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+TNIDG ++ A+TAIKG GRR+++ VL+KADID+ KRAGE +EEEV +++TIM+NPR
Sbjct: 16 FNTNIDGNICILHAMTAIKGIGRRYAHAVLRKADIDIRKRAGELAEEEVQQVVTIMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDW+LNRQ+DI DGK SQ++ LD+K+RED+ER+KKIR HRG+RHYWGLR R
Sbjct: 76 QYKIPDWYLNRQRDIKDGKTSQVIANG---LDNKMREDMERMKKIRLHRGLRHYWGLRTR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 133 GQHTKTTGRRGRTVGVSKKK 152
>gi|358058944|dbj|GAA95342.1| hypothetical protein E5Q_02000 [Mixia osmundae IAM 14324]
Length = 486
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 95/135 (70%), Positives = 117/135 (86%), Gaps = 3/135 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G +K+MFALT IKG GRR+SN+VLKKADIDLNKRAGE + +E+++++TI+ +P+
Sbjct: 56 LNTNVSGNKKIMFALTEIKGVGRRYSNVVLKKADIDLNKRAGELNSDELERVVTILQSPQ 115
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP W LNRQKDIVDGKYS I+ + LDSK REDLERLKKIR HRG+RH+WGLRVR
Sbjct: 116 NYKIPMWMLNRQKDIVDGKYSHIV---SNALDSKYREDLERLKKIRNHRGLRHFWGLRVR 172
Query: 121 GQHTKTTGRRGRTVG 135
GQHTKTTGRRG+TVG
Sbjct: 173 GQHTKTTGRRGKTVG 187
>gi|350587429|ref|XP_003482411.1| PREDICTED: 40S ribosomal protein S18-like [Sus scrofa]
Length = 269
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/139 (71%), Positives = 118/139 (84%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++T IDG +K+ FA TAIKG GRR++++VL+KADIDL KRAGE +E+EV+ +ITIM NP
Sbjct: 133 LNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPG 192
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KL ED+ERLKKIRAHRG+RH+WGLRV
Sbjct: 193 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLHEDVERLKKIRAHRGLRHFWGLRVG 249
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKTTGRRG TV VSKK
Sbjct: 250 GQHTKTTGRRGHTVRVSKK 268
>gi|159476746|ref|XP_001696472.1| ribosomal protein S18, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158282697|gb|EDP08449.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
Length = 153
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK K+M+A+TAI+G GRRFSN+V KKA++DL KRAGECS +E+++++ I+ NPR
Sbjct: 17 LNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIVANPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPDWFLNRQKD G++SQ+ +++QLD+ +R+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 77 AYKIPDWFLNRQKDHKTGRFSQL---TSSQLDTVMRDDLERLKKIRNHRGLRHYWGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G+TVGV+KKK
Sbjct: 134 GQHTKTTGRAGKTVGVAKKK 153
>gi|116783572|gb|ABK23001.1| unknown [Picea sitchensis]
gi|116784761|gb|ABK23462.1| unknown [Picea sitchensis]
gi|116785907|gb|ABK23903.1| unknown [Picea sitchensis]
gi|116790495|gb|ABK25635.1| unknown [Picea sitchensis]
gi|116792192|gb|ABK26268.1| unknown [Picea sitchensis]
gi|116792691|gb|ABK26459.1| unknown [Picea sitchensis]
gi|116793924|gb|ABK26933.1| unknown [Picea sitchensis]
gi|148907687|gb|ABR16972.1| unknown [Picea sitchensis]
gi|148908291|gb|ABR17259.1| unknown [Picea sitchensis]
gi|224284844|gb|ACN40152.1| unknown [Picea sitchensis]
Length = 152
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++K+MFALT+IKG GRR +N+V KKAD+D+NKRAGE + E++ ++ I+ NP+
Sbjct: 16 LNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKRAGELTALELENLMIIVANPK 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKDI DG+ +Q++ + LD KLR+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 76 QFKIPDWFLNRQKDIKDGRTTQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKK+
Sbjct: 133 GQHTKTTGRRGKTVGVSKKR 152
>gi|82952669|ref|XP_893065.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
Length = 186
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNI+G RK+ FA+TAIKG G+R++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 50 LNTNINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNPR 109
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QY IPDWFLNRQK + DGK SQ+L LD+KL EDLERLKKIRAHR + H+WGLRVR
Sbjct: 110 QYSIPDWFLNRQKYVKDGKCSQVLAKG---LDNKLPEDLERLKKIRAHRRLHHFWGLRVR 166
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRT+G+SKKK
Sbjct: 167 GQHTKTTGRRGRTMGISKKK 186
>gi|302782790|ref|XP_002973168.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii]
gi|300158921|gb|EFJ25542.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii]
Length = 156
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 122/144 (84%), Gaps = 7/144 (4%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE + E++ ++ I+ NPR
Sbjct: 16 LNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRA----HRGMRHYWG 116
Q+KIPDWFLNR+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWG
Sbjct: 76 QFKIPDWFLNRKKDYKDGRYSQVVANA---LDMKLRDDLERLKKIRQAYSDHRGLRHYWG 132
Query: 117 LRVRGQHTKTTGRRGRTVGVSKKK 140
LRVRGQHTKTT RRGRTVGVSKK+
Sbjct: 133 LRVRGQHTKTTERRGRTVGVSKKR 156
>gi|70992765|ref|XP_751231.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293]
gi|66848864|gb|EAL89193.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293]
gi|159130314|gb|EDP55427.1| ribosomal protein S13p/S18e [Aspergillus fumigatus A1163]
Length = 127
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/129 (76%), Positives = 115/129 (89%), Gaps = 3/129 (2%)
Query: 12 MFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNR 71
M+ALT IKG GRR+SN+V KKAD+DL+KRAGE + EE+++I+TI+ NP QYKIP WFLNR
Sbjct: 1 MYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTILQNPTQYKIPTWFLNR 60
Query: 72 QKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRG 131
Q+DIVDGK SQ+L + LDSKLREDLERLKKIR+HRG+RHYWGLRVRGQHTKTTGRRG
Sbjct: 61 QRDIVDGKDSQVL---SNGLDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRG 117
Query: 132 RTVGVSKKK 140
RTVGVSKKK
Sbjct: 118 RTVGVSKKK 126
>gi|109083515|ref|XP_001098938.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca
mulatta]
Length = 152
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+ FA+TAIKG GRR++++VL+KAD DL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPD FLNRQKD+ DGKYSQ L LD+ LR+DLERLKKI+AHRG+RH+WGL V+
Sbjct: 76 QYKIPDRFLNRQKDVKDGKYSQALANG---LDNNLRKDLERLKKIQAHRGLRHFWGLCVQ 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRT+GVS+KK
Sbjct: 133 GQHTKTTGRRGRTMGVSEKK 152
>gi|388579740|gb|EIM20061.1| ribosomal protein S13 [Wallemia sebi CBS 633.66]
Length = 158
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 124/140 (88%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+ +A+T IKG G R++N+V+KKAD+DL KRAGE + +E+++I++I+ NP
Sbjct: 20 LNTNVDGKRKIQYAMTEIKGVGPRYANVVIKKADVDLFKRAGELNSDELERIVSILQNPT 79
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP+WFLNR+KDI DGK Q++ + Q+D+KLR+DLERLKKIRAHRG+RH+WG+RVR
Sbjct: 80 QFKIPNWFLNRRKDITDGKNYQVV---SNQVDAKLRDDLERLKKIRAHRGLRHFWGIRVR 136
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKKK
Sbjct: 137 GQHTKTTGRRGKTVGVSKKK 156
>gi|430811840|emb|CCJ30696.1| unnamed protein product [Pneumocystis jirovecii]
Length = 156
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 121/139 (87%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++KV+FALT IKG GRR++++V KKADID NKRAGE + +E+++I+TI+ NP
Sbjct: 21 LNTNVDGRQKVIFALTQIKGVGRRYASLVCKKADIDTNKRAGELTTDELERIVTIIQNPL 80
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLN Q+ IVDGK SQ+L QLD+KLREDLERLKKIRAHRG+RH+WGLRVR
Sbjct: 81 AYKIPTWFLNSQRAIVDGKNSQVL---ANQLDNKLREDLERLKKIRAHRGLRHFWGLRVR 137
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKTTGR+G+TVGVS+K
Sbjct: 138 GQHTKTTGRKGKTVGVSRK 156
>gi|1350947|sp|P49202.1|RS18_CHLRE RecName: Full=40S ribosomal protein S18
gi|624957|emb|CAA58668.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
gi|1587084|prf||2205351A ribosomal protein S18
Length = 153
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK K+M+A+TAI+G GRRFSN+V KKA++DL K AGECS +E+++++ I+ NPR
Sbjct: 17 LNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKAAGECSADELERMMGIVANPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIPDWFLNRQKD G++SQ+ +++QLD+ +R+DLERLKKIR HRG+RHYWGLRVR
Sbjct: 77 AYKIPDWFLNRQKDHKTGRFSQL---TSSQLDTVMRDDLERLKKIRGHRGLRHYWGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G+TVGV+KKK
Sbjct: 134 GQHTKTTGRAGKTVGVAKKK 153
>gi|125546023|gb|EAY92162.1| hypothetical protein OsI_13875 [Oryza sativa Indica Group]
gi|125588230|gb|EAZ28894.1| hypothetical protein OsJ_12934 [Oryza sativa Japonica Group]
Length = 170
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/158 (62%), Positives = 125/158 (79%), Gaps = 21/158 (13%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKR------------------AG 42
++TN+DGK+K+MFALT+IKG GRRFSNI KKADID+NKR AG
Sbjct: 16 LNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRQEPPPPPSRRQISVMVGGAG 75
Query: 43 ECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERL 102
E + EE+++++T++ NPRQ+K+PDWFLNR+KD DG++SQ++ + LD KLR+DLERL
Sbjct: 76 ELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVV---SNALDMKLRDDLERL 132
Query: 103 KKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
KKIR HRG+RHYWGLRVRGQHTKTTGRRG+TVGVSKK+
Sbjct: 133 KKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 170
>gi|302915869|ref|XP_003051745.1| 40S ribosomal protein S18 [Nectria haematococca mpVI 77-13-4]
gi|256732684|gb|EEU46032.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 131
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 114/130 (87%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 5 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 64
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK S IL +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 65 QYKIPTWFLNRQRDIVDGKDSHILANG---VDSKLREDLERLKKIRAHRGLRHYWGLRVR 121
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 122 GQHTKTTGRR 131
>gi|358377759|gb|EHK15442.1| hypothetical protein TRIVIDRAFT_131804, partial [Trichoderma virens
Gv29-8]
Length = 131
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 114/130 (87%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KVM+ALT IKG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 5 LNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 64
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK S IL +DSKLREDLERLKKIRAHRG+RHYWGLRVR
Sbjct: 65 QYKIPGWFLNRQRDIVDGKDSHILANG---VDSKLREDLERLKKIRAHRGLRHYWGLRVR 121
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 122 GQHTKTTGRR 131
>gi|313229085|emb|CBY18237.1| unnamed protein product [Oikopleura dioica]
Length = 152
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 120/139 (86%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG+R + FA+TAIKG GRRF+NI+ KKADI++++RAG+ EEE+ ++ TIM NPRQ
Sbjct: 17 NTNIDGQRNITFAMTAIKGIGRRFANIICKKADINISQRAGQLDEEEIKRMETIMLNPRQ 76
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YK+PD+FLNRQKD DG ++Q++ + L++KLREDLER+KKIR HRG+RHYW LRVRG
Sbjct: 77 YKVPDYFLNRQKDAKDGTFTQVI---SNGLETKLREDLERMKKIRCHRGLRHYWMLRVRG 133
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRGRTVGVSKKK
Sbjct: 134 QHTKTTGRRGRTVGVSKKK 152
>gi|148670323|gb|EDL02270.1| mCG49228 [Mus musculus]
Length = 134
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 118/140 (84%), Gaps = 6/140 (4%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ F +TAIK G+R++++VL+KADIDL K GE +EEEV+++ITIM NPR
Sbjct: 1 LNTNIDGRRKIAFVITAIKDMGQRYTHVVLRKADIDLTKSVGELTEEEVERVITIMQNPR 60
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQK DGKYSQ+L S +DSKLRE LERLKKI+AHRG+ H+WGL VR
Sbjct: 61 QYKIPDWFLNRQK---DGKYSQVLANS---IDSKLRESLERLKKIQAHRGLHHFWGLHVR 114
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
QHTKTTG RGRTVGVSKKK
Sbjct: 115 SQHTKTTGCRGRTVGVSKKK 134
>gi|19113298|ref|NP_596506.1| 40S ribosomal protein S18 [Schizosaccharomyces pombe 972h-]
gi|162312104|ref|NP_588057.2| 40S ribosomal protein S18 [Schizosaccharomyces pombe 972h-]
gi|6831658|sp|O94754.1|RS18_SCHPO RecName: Full=40S ribosomal protein S18
gi|4481957|emb|CAB38515.1| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe]
gi|157310505|emb|CAB58414.2| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe]
Length = 152
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 119/140 (85%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KVMFA+T IKG GRR++NIV KKADID++KRAGE + EE+++I+TI+ NP
Sbjct: 16 LNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTIIQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDI DGK Q+L + +DSKLREDLERLKKI+ HRG+RH LRVR
Sbjct: 76 QFKIPSWFLNRQKDINDGKSFQLLANN---VDSKLREDLERLKKIQTHRGLRHALDLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKKK
Sbjct: 133 GQHTKTTGRRGKTVGVSKKK 152
>gi|332223530|ref|XP_003260926.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Nomascus
leucogenys]
gi|441666531|ref|XP_004091895.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Nomascus
leucogenys]
gi|441666534|ref|XP_004091896.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Nomascus
leucogenys]
gi|441666537|ref|XP_004091897.1| PREDICTED: 40S ribosomal protein S18-like isoform 4 [Nomascus
leucogenys]
Length = 152
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 116/140 (82%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K FA+TAIKG G+R+ ++VL+KADID KR GE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGQWKTAFAITAIKGVGQRYVHVVLRKADIDCTKRVGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLN QKD+ DGKYSQ+L LD+KL EDLERLKKIRAHRG+RH WGL V+
Sbjct: 76 QYKIPDWFLNTQKDVKDGKYSQVLANG---LDNKLHEDLERLKKIRAHRGLRHSWGLHVQ 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
QHTKTTG RG TVGVSKKK
Sbjct: 133 SQHTKTTGHRGCTVGVSKKK 152
>gi|148709378|gb|EDL41324.1| mCG121998 [Mus musculus]
Length = 134
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 118/137 (86%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
NI+G RK+ FA+TAIKG G+R++++VL+KADIDL KRAGE +E+EV+++ITIM NPRQY
Sbjct: 1 NINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYS 60
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IPDWFLNRQK + DGK SQ+L LD+KL EDLERLKKIRAHR + H+WGLRVRGQH
Sbjct: 61 IPDWFLNRQKYVKDGKCSQVLAKG---LDNKLPEDLERLKKIRAHRRLHHFWGLRVRGQH 117
Query: 124 TKTTGRRGRTVGVSKKK 140
TKTTGRRGRT+G+SKKK
Sbjct: 118 TKTTGRRGRTMGISKKK 134
>gi|109126207|ref|XP_001091975.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca
mulatta]
Length = 149
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 118/140 (84%), Gaps = 6/140 (4%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK FA+TAIKG G R+++ VL+KADIDL KRAGE +EEEV+++IT+ NPR
Sbjct: 16 LNTNIDGRRKTAFAITAIKGVGGRYAHAVLRKADIDLTKRAGELTEEEVERVITLTQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRA RG+ H+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAPRGLCHFWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTT G TVGVSKKK
Sbjct: 133 GQHTKTT---GLTVGVSKKK 149
>gi|449015430|dbj|BAM78832.1| 40S ribosomal protein S18 [Cyanidioschyzon merolae strain 10D]
Length = 154
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 121/138 (87%), Gaps = 3/138 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGK+KV +ALTAIKG GRRF+++V KKA++DL KRAG+ ++EEVD+I+TI+ NPR
Sbjct: 17 LNTNIDGKQKVAYALTAIKGIGRRFADLVCKKAEVDLGKRAGQLTDEEVDRIVTIIQNPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KDI DGKY Q++ + LD KLREDL+R++K+R HRG+RH+WG+RVR
Sbjct: 77 QFKIPDWFLNRRKDIRDGKYQQLV---SNNLDFKLREDLDRMRKVRLHRGLRHFWGIRVR 133
Query: 121 GQHTKTTGRRGRTVGVSK 138
GQ TKTTGR G+TVGVSK
Sbjct: 134 GQKTKTTGRHGKTVGVSK 151
>gi|344257209|gb|EGW13313.1| 40S ribosomal protein S18 [Cricetulus griseus]
Length = 152
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 112/124 (90%), Gaps = 3/124 (2%)
Query: 17 AIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIV 76
+ +G GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPRQYKIPDWFLNRQKD+
Sbjct: 32 SPQGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVK 91
Query: 77 DGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGV 136
DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQHTKTTGRRGRTVGV
Sbjct: 92 DGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV 148
Query: 137 SKKK 140
SKKK
Sbjct: 149 SKKK 152
>gi|354497561|ref|XP_003510888.1| PREDICTED: 40S ribosomal protein S18-like [Cricetulus griseus]
Length = 136
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/131 (74%), Positives = 113/131 (86%), Gaps = 3/131 (2%)
Query: 10 KVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFL 69
K+ L G GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPRQYKIPDWFL
Sbjct: 9 KIPPELALQVGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFL 68
Query: 70 NRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
NRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQHTKTTGR
Sbjct: 69 NRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR 125
Query: 130 RGRTVGVSKKK 140
RGRTVGVSKKK
Sbjct: 126 RGRTVGVSKKK 136
>gi|330845753|ref|XP_003294736.1| 40S ribosomal protein S18 [Dictyostelium purpureum]
gi|325074743|gb|EGC28736.1| 40S ribosomal protein S18 [Dictyostelium purpureum]
Length = 154
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 119/139 (85%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DG+RKVM+AL +KG G+RF+++V KKAD+D +KRAGE S++EV+++ TIM +PRQ
Sbjct: 17 NTNVDGRRKVMYALMCVKGVGKRFADLVCKKADVDTSKRAGELSKDEVERLTTIMNHPRQ 76
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP WFLNRQKDI DGKYSQ L Q+D K REDLERLKKIRAHRG+RH++GLRVRG
Sbjct: 77 YNIPTWFLNRQKDIKDGKYSQCLAN---QIDVKFREDLERLKKIRAHRGIRHHFGLRVRG 133
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TKTTGRRGRTVGV+KK+
Sbjct: 134 QKTKTTGRRGRTVGVAKKR 152
>gi|323455964|gb|EGB11831.1| hypothetical protein AURANDRAFT_20379 [Aureococcus anophagefferens]
Length = 154
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 115/139 (82%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKVMFALT+I G GRRFSN+V KKA +D +KRAGE + +EV+K++ I+ NP+
Sbjct: 19 LNTNIDGRRKVMFALTSIPGVGRRFSNVVCKKAAVDAHKRAGELTADEVEKLVAIIQNPK 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD GKYSQ + L KLREDLERLKKIRAHRG+RHYWG+RVR
Sbjct: 79 QFKIPAWFLNRQKDYKTGKYSQAFANT---LQQKLREDLERLKKIRAHRGLRHYWGIRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTK+TGRRG+T+ +KK
Sbjct: 136 GQHTKSTGRRGKTMAATKK 154
>gi|71005082|ref|XP_757207.1| hypothetical protein UM01060.1 [Ustilago maydis 521]
gi|46096569|gb|EAK81802.1| hypothetical protein UM01060.1 [Ustilago maydis 521]
Length = 154
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 119/139 (85%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV +ALT IKG GRR++NIV KKADIDL+KRAGE + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKIKVQYALTQIKGVGRRYANIVCKKADIDLSKRAGELNSDELERIVTILQNPA 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIP WFLNRQ+DIVDGK SQ+L + +DSKLR+DLERLKKI+AHRG+RHY GLRVR
Sbjct: 79 EFKIPSWFLNRQRDIVDGKSSQLL---SNNIDSKLRDDLERLKKIKAHRGIRHYLGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKTTGRRGRTV KK
Sbjct: 136 GQHTKTTGRRGRTVANKKK 154
>gi|428176266|gb|EKX45151.1| small subunit ribosomal protein S18e_1, cytoplasmic [Guillardia
theta CCMP2712]
Length = 155
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 121/140 (86%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TNIDGK+KVM+A+T++KG GRRFSNIV KKAD+D++KRAGE +++E+D ++T++ P
Sbjct: 18 LGTNIDGKQKVMYAMTSVKGIGRRFSNIVCKKADVDMDKRAGELTQKEMDDLVTVIQVPH 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIP W LNR+KD DGK SQ+ S+ Q+D K+R+DLERLKKI+ HRG+RHYWGLRVR
Sbjct: 78 EFKIPAWMLNRRKDFKDGKTSQL---SSNQIDQKMRDDLERLKKIKNHRGLRHYWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKKK
Sbjct: 135 GQHTKTTGRRGKTVGVSKKK 154
>gi|443895394|dbj|GAC72740.1| ribosomal protein S18 [Pseudozyma antarctica T-34]
Length = 181
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 118/139 (84%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV +ALT +KG GRR++NIV KKADIDL KRAGE + +E+++I+TI+ NP
Sbjct: 46 LNTNVDGKIKVQYALTQVKGVGRRYANIVCKKADIDLGKRAGELNSDELERIVTILQNPA 105
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIP WFLNRQ+DIVDGK SQ+L + +DSKLR+DLERLKKI+AHRG+RHY GLRVR
Sbjct: 106 EFKIPAWFLNRQRDIVDGKSSQLL---SNNIDSKLRDDLERLKKIKAHRGIRHYLGLRVR 162
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKTTGRRGRTV KK
Sbjct: 163 GQHTKTTGRRGRTVANKKK 181
>gi|213406555|ref|XP_002174049.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
gi|213409073|ref|XP_002175307.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
gi|212002096|gb|EEB07756.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
gi|212003354|gb|EEB09014.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
Length = 152
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 119/140 (85%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KVM+ALT IKG GRR++NI KKAD+D++KRAGE + EE+++++TI+ NP
Sbjct: 16 LNTNVDGKNKVMYALTQIKGVGRRYANIACKKADVDMSKRAGELTTEELERLVTIVQNPT 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDI DGK Q+L + +DSKLR+DLERLKKI+AHRG+RH LRVR
Sbjct: 76 QFKIPAWFLNRQKDITDGKSYQLLANN---VDSKLRDDLERLKKIQAHRGLRHALDLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVSKKK
Sbjct: 133 GQHTKTTGRRGKTVGVSKKK 152
>gi|388851622|emb|CCF54812.1| probable RPS18A-ribosomal protein S18.e.c4 [Ustilago hordei]
Length = 154
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 118/139 (84%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV +ALT IKG GRR++NIV KKADIDL KRAGE + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKIKVQYALTQIKGVGRRYANIVCKKADIDLGKRAGELNSDELERIVTILQNPA 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIP WFLNRQ+DIVDGK SQ+L + +DSKLR+DLERLKKI+AHRG+RHY GLRVR
Sbjct: 79 EFKIPTWFLNRQRDIVDGKSSQLL---SNNIDSKLRDDLERLKKIKAHRGIRHYLGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKTTGRRGRTV KK
Sbjct: 136 GQHTKTTGRRGRTVANKKK 154
>gi|126309823|ref|XP_001377507.1| PREDICTED: 40S ribosomal protein S18-like [Monodelphis domestica]
Length = 184
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 119/140 (85%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 49 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 108
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERL+ AHR + LRVR
Sbjct: 109 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLRD-SAHRASTLWGDLRVR 164
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 165 GQHTKTTGRRGRTVGVSKKK 184
>gi|343426930|emb|CBQ70458.1| probable RPS18A-ribosomal protein S18.e.c4 [Sporisorium reilianum
SRZ2]
Length = 154
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 118/139 (84%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV +ALT IKG GRR++NIV KKADIDL KRAGE + +E+++I+TI+ NP
Sbjct: 19 LNTNVDGKIKVQYALTQIKGVGRRYANIVCKKADIDLGKRAGELNSDELERIVTILQNPA 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIP WFLNRQ+DIVDGK SQ+L + +DSKLR+DLERLKKI+AHRG+RHY GLRVR
Sbjct: 79 EFKIPAWFLNRQRDIVDGKSSQLL---SNNIDSKLRDDLERLKKIKAHRGIRHYLGLRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKTTGRRGRTV KK
Sbjct: 136 GQHTKTTGRRGRTVANKKK 154
>gi|406601473|emb|CCH46896.1| 40S ribosomal protein S18 [Wickerhamomyces ciferrii]
Length = 148
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 116/134 (86%), Gaps = 3/134 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ K+ +ALT I+G GRR+SN+V KKAD+DL KRAGE ++EE+++++TI+ NP
Sbjct: 18 LNTNVDGRIKIQYALTTIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERVVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQKDIVDGK S +L QL+SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 QYKIPAWFLNRQKDIVDGKDSHVL---ANQLESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRRGRTV 134
GQHTKTTGRRG+ V
Sbjct: 135 GQHTKTTGRRGKRV 148
>gi|66818921|ref|XP_643120.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4]
gi|74926730|sp|Q869U7.1|RS18_DICDI RecName: Full=40S ribosomal protein S18
gi|60471198|gb|EAL69161.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4]
Length = 154
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 117/139 (84%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DG+RK+ +ALT +KG GRRF+N+V KKADID +KRAGE S++EV+++ TIM +PRQ
Sbjct: 19 NTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIMNHPRQ 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP WFLNRQKDI DGKYS L Q+D K REDLERLKKIRAHRG+RH++GLRVRG
Sbjct: 79 YNIPTWFLNRQKDIKDGKYSHCLAN---QIDVKFREDLERLKKIRAHRGVRHHFGLRVRG 135
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TKTTGRRGRTVGV+ ++
Sbjct: 136 QKTKTTGRRGRTVGVAGRR 154
>gi|195610746|gb|ACG27203.1| 40S ribosomal protein S18 [Zea mays]
gi|413932828|gb|AFW67379.1| 40S ribosomal protein S18 [Zea mays]
Length = 126
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/129 (70%), Positives = 115/129 (89%), Gaps = 3/129 (2%)
Query: 12 MFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNR 71
MFA+T+IKG GRRFSNIV KKADID+NKRAGE + +E+++++T++ NPRQ+K+PDWFLNR
Sbjct: 1 MFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVVANPRQFKVPDWFLNR 60
Query: 72 QKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRG 131
+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVRGQHTKTTGRRG
Sbjct: 61 KKDYKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRG 117
Query: 132 RTVGVSKKK 140
+TVGVSKK+
Sbjct: 118 KTVGVSKKR 126
>gi|297737051|emb|CBI26252.3| unnamed protein product [Vitis vinifera]
Length = 126
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 112/129 (86%), Gaps = 3/129 (2%)
Query: 12 MFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNR 71
MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S E++ ++ I+ NPRQ+KIPDWFLNR
Sbjct: 1 MFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNR 60
Query: 72 QKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRG 131
+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVRGQHTKTTGRRG
Sbjct: 61 KKDYKDGRYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRG 117
Query: 132 RTVGVSKKK 140
+TVGVSKK+
Sbjct: 118 KTVGVSKKR 126
>gi|347836382|emb|CCD50954.1| similar to 40S ribosomal protein S18 [Botryotinia fuckeliana]
Length = 147
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 117/140 (83%), Gaps = 12/140 (8%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GK+K G GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVEGKQK---------GVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPT 68
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DIVDGK SQ+L +DSKLR+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 69 QYKIPSWFLNRQRDIVDGKDSQVLANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVR 125
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQH+KTTGRRGRTVGVSKKK
Sbjct: 126 GQHSKTTGRRGRTVGVSKKK 145
>gi|212531371|ref|XP_002145842.1| 40S ribosomal protein S18 [Talaromyces marneffei ATCC 18224]
gi|210071206|gb|EEA25295.1| ribosomal protein S13p/S18e [Talaromyces marneffei ATCC 18224]
Length = 127
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 114/129 (88%), Gaps = 3/129 (2%)
Query: 12 MFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNR 71
M+ALT IKG GRR+SN+V KKAD+DL+KRAG+ + EE+++I+TI+ NP QYKIP WFLNR
Sbjct: 1 MYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTIIQNPTQYKIPAWFLNR 60
Query: 72 QKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRG 131
Q+DI DGK +Q++ + +DSKLREDLERLKKIR+HRG+RHYWGLRVRGQHTKTTGRRG
Sbjct: 61 QRDITDGKDTQVI---SNGVDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRG 117
Query: 132 RTVGVSKKK 140
RTVGVSKKK
Sbjct: 118 RTVGVSKKK 126
>gi|443919031|gb|ELU39326.1| 40s ribosomal protein [Rhizoctonia solani AG-1 IA]
Length = 376
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/132 (68%), Positives = 114/132 (86%), Gaps = 3/132 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+M+ALT I+G GRR++N+V KKAD+DL KRAG+ + +E+++I+TIM NP
Sbjct: 19 LNTNVDGKRKIMYALTEIRGVGRRYANVVCKKADVDLKKRAGDLNSDELERIVTIMQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKDIVDGK SQIL + +DSK+R+DLERLKKIRAHRG+RHYWGLRVR
Sbjct: 79 QFKIPTWFLNRQKDIVDGKNSQIL---SNAIDSKMRDDLERLKKIRAHRGLRHYWGLRVR 135
Query: 121 GQHTKTTGRRGR 132
GQHTKTTG G
Sbjct: 136 GQHTKTTGEYGH 147
>gi|47207607|emb|CAF90116.1| unnamed protein product [Tetraodon nigroviridis]
Length = 132
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/136 (69%), Positives = 115/136 (84%), Gaps = 4/136 (2%)
Query: 5 IDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKI 64
+DG R + + + + ++++VL+KADIDLNKRAGE +EEEV++++TIM NPRQYKI
Sbjct: 1 MDGGRSPLPSQPS-RASADVYAHVVLRKADIDLNKRAGELTEEEVERVVTIMQNPRQYKI 59
Query: 65 PDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHT 124
PDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQHT
Sbjct: 60 PDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHT 116
Query: 125 KTTGRRGRTVGVSKKK 140
KTTGRRGRTVGVSKKK
Sbjct: 117 KTTGRRGRTVGVSKKK 132
>gi|256084884|ref|XP_002578655.1| 40S ribosomal protein S18 [Schistosoma mansoni]
gi|360042889|emb|CCD78299.1| putative 40s ribosomal protein S18 [Schistosoma mansoni]
Length = 152
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 130/140 (92%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+ K+M+A+T+IKG GRR++N+V KKADIDLNKRAGE +E+EV+K++T+M+NPR
Sbjct: 16 MNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTEDEVEKLVTVMSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGK+SQ++ + L++KLREDLERLK+IR+HRG+RHYWGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVDDGKHSQLM---SGALETKLREDLERLKRIRSHRGIRHYWGLRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT+TTGRRGRTVGVS+KK
Sbjct: 133 GQHTRTTGRRGRTVGVSRKK 152
>gi|440302321|gb|ELP94643.1| 40S ribosomal protein S18, putative [Entamoeba invadens IP1]
Length = 157
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 116/139 (83%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DGK+KV +ALT IKGCGRRF+ +V K+A ID+N+RAG +EVDK++ I+TNP
Sbjct: 18 NTNLDGKKKVPYALTGIKGCGRRFAFLVCKRAGIDVNRRAGLLKADEVDKVVDILTNPLN 77
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YKIP WFLNRQKDI DGK Q++ + ++++LRED+E LKK+RAHRG+RHYWGLRVRG
Sbjct: 78 YKIPVWFLNRQKDIKDGKNCQLIANA---VETRLREDIEALKKMRAHRGLRHYWGLRVRG 134
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRGRTVGVS+ K
Sbjct: 135 QHTKTTGRRGRTVGVSRTK 153
>gi|440291463|gb|ELP84732.1| 40S ribosomal protein S18, putative [Entamoeba invadens IP1]
Length = 157
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 116/139 (83%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DGK+KV +ALT IKGCGRRF+ +V K+A ID+N+RAG +EVDK++ I+TNP
Sbjct: 18 NTNLDGKKKVPYALTGIKGCGRRFAFLVCKRAGIDVNRRAGLLKADEVDKVVDILTNPLN 77
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YKIP WFLNRQKDI DGK Q++ + ++++LRED+E LKK+RAHRG+RHYWGLRVRG
Sbjct: 78 YKIPVWFLNRQKDIKDGKNCQLIANA---VETRLREDIEALKKMRAHRGLRHYWGLRVRG 134
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRGRTVGVS+ K
Sbjct: 135 QHTKTTGRRGRTVGVSRTK 153
>gi|70943818|ref|XP_741909.1| ribosomal protein S18 [Plasmodium chabaudi chabaudi]
gi|56520588|emb|CAH81563.1| ribosomal protein S18, putative [Plasmodium chabaudi chabaudi]
Length = 156
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 116/140 (82%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV ALTAIKG G+R +N++ K+A++D KRAGE + EE++ I+ IM++P
Sbjct: 18 LNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIMSSPS 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR++DI DGK ++ QLDS LREDLER+KKIR HRG+RH+WGLRVR
Sbjct: 78 QFKIPDWFLNRRRDIKDGKNLHVI---ANQLDSYLREDLERMKKIRLHRGLRHHWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGV+KKK
Sbjct: 135 GQHTKTTGRRGRTVGVAKKK 154
>gi|68069309|ref|XP_676565.1| ribosomal protein S18 [Plasmodium berghei strain ANKA]
gi|82794396|ref|XP_728420.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii 17XNL]
gi|23484766|gb|EAA19985.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii]
gi|56496322|emb|CAH96119.1| ribosomal protein S18, putative [Plasmodium berghei]
Length = 156
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 116/140 (82%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV ALTAIKG G+R +N++ K+A++D KRAGE + EE++ I+ IM++P
Sbjct: 18 LNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIMSSPS 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR++DI DGK ++ QLDS LREDLER+KKIR HRG+RH+WGLRVR
Sbjct: 78 QFKIPDWFLNRRRDIKDGKNLHVI---ANQLDSYLREDLERMKKIRLHRGLRHHWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGV+KKK
Sbjct: 135 GQHTKTTGRRGRTVGVAKKK 154
>gi|440293655|gb|ELP86748.1| ribosomal protein S13p/S18e protein, partial [Entamoeba invadens
IP1]
Length = 156
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 116/139 (83%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DGK+KV +ALT IKGCGRRF+ +V K+A ID+N+RAG +EVDK++ I+TNP
Sbjct: 17 NTNLDGKKKVPYALTGIKGCGRRFAFLVCKRAGIDVNRRAGLLKADEVDKVVDILTNPLN 76
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YKIP WFLNRQKDI DGK Q++ + ++++LRED+E LKK+RAHRG+RHYWGLRVRG
Sbjct: 77 YKIPVWFLNRQKDIKDGKNCQLIANA---VETRLREDIEALKKMRAHRGLRHYWGLRVRG 133
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRGRTVGVS+ K
Sbjct: 134 QHTKTTGRRGRTVGVSRTK 152
>gi|158187718|gb|ABW23148.1| ribosomal protein rps18 [Arenicola marina]
Length = 114
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/117 (78%), Positives = 107/117 (91%), Gaps = 3/117 (2%)
Query: 24 RFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQI 83
R+S++V KKAD+D +KRAGE S+EEV+KI+TIM+NPRQYKIPDWFLNRQKD+ DGK+SQI
Sbjct: 1 RYSHVVCKKADVDTSKRAGELSDEEVEKIVTIMSNPRQYKIPDWFLNRQKDVKDGKFSQI 60
Query: 84 LLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
+ + LDSK+REDLERLKKIR HRG+RHYWGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 61 M---SNVLDSKIREDLERLKKIRVHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 114
>gi|320581243|gb|EFW95464.1| ribosomal protein S18B [Ogataea parapolymorpha DL-1]
Length = 150
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/135 (65%), Positives = 114/135 (84%), Gaps = 3/135 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KVM+ALT I+G GRR++N+V KKAD+DL+KRAGE ++EE+++I+TIM NP
Sbjct: 18 LNTNVDGRIKVMYALTTIRGVGRRYANLVCKKADVDLSKRAGELTQEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ D+VDGK +L + L+SKLREDLERLK++RAHRG+RH W LRVR
Sbjct: 78 QYKIPAWFLNRQADVVDGKDYHVLANN---LESKLREDLERLKRMRAHRGLRHSWRLRVR 134
Query: 121 GQHTKTTGRRGRTVG 135
GQHTKTTGRRG+ G
Sbjct: 135 GQHTKTTGRRGKIAG 149
>gi|124804238|ref|XP_001347943.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7]
gi|23496197|gb|AAN35856.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7]
Length = 156
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 115/140 (82%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV+ ALTAIKG G+R + ++ K+A++D KRAGE + EE+D I+ IM+ P
Sbjct: 18 LNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGELTTEEIDNIVHIMSTPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD+ +GK ++ QLDS LREDLER+KKIR HRG+RH+WGLRVR
Sbjct: 78 QFKIPDWFLNRRKDLKEGKNIHVI---ANQLDSYLREDLERMKKIRLHRGLRHHWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGV+KKK
Sbjct: 135 GQHTKTTGRRGRTVGVAKKK 154
>gi|237833767|ref|XP_002366181.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49]
gi|211963845|gb|EEA99040.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49]
gi|221486391|gb|EEE24652.1| 40S ribosomal protein S18, putative [Toxoplasma gondii GT1]
gi|221508170|gb|EEE33757.1| 40S ribosomal protein S18, putative [Toxoplasma gondii VEG]
Length = 156
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 114/140 (81%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KV+ ALTAI+G GRR SN++ KKADID NKRAGE + +E+ K++ I + P+
Sbjct: 18 LNTNVDGREKVVVALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIASTPQ 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD+ DGK+ ++ LD+ REDLERLKK+R HRG+RHYWGL+VR
Sbjct: 78 QFKIPTWFLNRQKDVKDGKHKHVVANG---LDTVWREDLERLKKMRLHRGLRHYWGLKVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR GRTVGV+KKK
Sbjct: 135 GQHTKTTGRHGRTVGVAKKK 154
>gi|401409830|ref|XP_003884363.1| putative 40S ribosomal protein S18 [Neospora caninum Liverpool]
gi|325118781|emb|CBZ54332.1| putative 40S ribosomal protein S18 [Neospora caninum Liverpool]
Length = 156
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 114/140 (81%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KV+ ALTAI+G GRR SN++ KKADID NKRAGE + +E+ K++ I + P+
Sbjct: 18 LNTNVDGREKVVIALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIASTPQ 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD+ DGK+ ++ LD+ REDLERLKK+R HRG+RHYWGL+VR
Sbjct: 78 QFKIPTWFLNRQKDVRDGKHKHVVANG---LDTVWREDLERLKKMRLHRGLRHYWGLKVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR GRTVGV+KKK
Sbjct: 135 GQHTKTTGRHGRTVGVAKKK 154
>gi|406867512|gb|EKD20550.1| 40S ribosomal protein S18 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 123
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/119 (78%), Positives = 106/119 (89%), Gaps = 3/119 (2%)
Query: 22 GRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYS 81
GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP QYKIP WFLNRQ+DIVDGK S
Sbjct: 6 GRRYSNLVCKKADVDLNKRAGELTSEELERIVTIIQNPTQYKIPSWFLNRQRDIVDGKDS 65
Query: 82 QILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
QIL +DSKLREDLERLKKIRAHRG+RHYWGLRVRGQH+KTTGRRGRTVGVSKKK
Sbjct: 66 QILANG---VDSKLREDLERLKKIRAHRGLRHYWGLRVRGQHSKTTGRRGRTVGVSKKK 121
>gi|299115551|emb|CBN75754.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 192
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 117/140 (83%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKV ++LT+I+G GRRF+N++ KKA++D NKRAGE + +E++K++ I+ NPR
Sbjct: 56 LNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPR 115
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNRQKD GK +QI S+ +D KLR+DLERLKKIR+HRG+RHYWG+RVR
Sbjct: 116 QFKIPDWFLNRQKDWKTGKTTQI---SSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRVR 172
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+ V +K
Sbjct: 173 GQHTKTTGRRGKIVAAGGRK 192
>gi|351703682|gb|EHB06601.1| 40S ribosomal protein S18 [Heterocephalus glaber]
Length = 119
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/121 (75%), Positives = 108/121 (89%), Gaps = 3/121 (2%)
Query: 20 GCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGK 79
G GRR++++VL+KADIDL +RAGE +EEEV+++ITIM NP QYKIPDWFLNRQKD+ DGK
Sbjct: 2 GVGRRYAHVVLRKADIDLTERAGELTEEEVERVITIMQNPLQYKIPDWFLNRQKDVKDGK 61
Query: 80 YSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKK 139
Y+Q+L LD+KL EDLERLKKIRAHRG+RH+WGLRVRGQHTKTTGRRGRT+GVSKK
Sbjct: 62 YTQVLANG---LDNKLCEDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTMGVSKK 118
Query: 140 K 140
K
Sbjct: 119 K 119
>gi|221056254|ref|XP_002259265.1| ribosomal protein s18 [Plasmodium knowlesi strain H]
gi|193809336|emb|CAQ40038.1| ribosomal protein s18, putative [Plasmodium knowlesi strain H]
gi|389583804|dbj|GAB66538.1| 40S ribosomal protein S18 [Plasmodium cynomolgi strain B]
Length = 156
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 113/140 (80%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV ALTAIKG G+R + ++ K+A++D KRAGE + EE++ I+ IM P
Sbjct: 18 LNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIMNAPS 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD+ +GK ++ QLDS LREDLER+KKIR HRG+RH+WGLRVR
Sbjct: 78 QFKIPDWFLNRRKDVKEGKNLHVI---ANQLDSYLREDLERMKKIRLHRGLRHHWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|156098723|ref|XP_001615377.1| 40S ribosomal protein S18 [Plasmodium vivax Sal-1]
gi|148804251|gb|EDL45650.1| 40S ribosomal protein S18, putative [Plasmodium vivax]
Length = 156
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 113/140 (80%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV ALTAIKG G+R + ++ K+A++D KRAGE + EE++ I+ IM P
Sbjct: 18 LNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIMNAPS 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIPDWFLNR+KD+ +GK ++ QLDS LREDLER+KKIR HRG+RH+WGLRVR
Sbjct: 78 QFKIPDWFLNRRKDVKEGKNLHVI---ANQLDSYLREDLERMKKIRLHRGLRHHWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 135 GQHTKTTGRRGRTVGVSKKK 154
>gi|392577952|gb|EIW71080.1| hypothetical protein TREMEDRAFT_71055 [Tremella mesenterica DSM
1558]
Length = 154
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 115/139 (82%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G+ K+MFALT IKG GRR++N+V KKADID++KRAGE + +E+++I+TIM NP
Sbjct: 19 LNTNVQGQGKIMFALTEIKGVGRRYANLVCKKADIDMSKRAGELNSDELERIVTIMQNPA 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD+ DGK S +L + +D +LR+DLERLKKIRAHRG+RH+W RVR
Sbjct: 79 QFKIPSWFLNRQKDLADGKDSHML---SNVIDQRLRDDLERLKKIRAHRGLRHHWHTRVR 135
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKTTGRRG+T+ KK
Sbjct: 136 GQHTKTTGRRGKTMAAKKK 154
>gi|449446395|ref|XP_004140957.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
Length = 137
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 108/129 (83%), Gaps = 3/129 (2%)
Query: 12 MFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNR 71
+ + IKG GRRF+NIV KKAD+D+NKRAGE + E+D ++ ++ NPRQ+KIPDWFLNR
Sbjct: 12 ILRVLTIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNR 71
Query: 72 QKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRG 131
QKD DGKYSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVRGQHTKTTGRRG
Sbjct: 72 QKDYKDGKYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRG 128
Query: 132 RTVGVSKKK 140
+TVGVSKK+
Sbjct: 129 KTVGVSKKR 137
>gi|303289004|ref|XP_003063790.1| ribosomal protein S18 [Micromonas pusilla CCMP1545]
gi|226454858|gb|EEH52163.1| ribosomal protein S18 [Micromonas pusilla CCMP1545]
Length = 144
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 111/130 (85%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KVM+ALT I+G GRRF+N+V KKA+ID+ KRAGE S E++ ++ I+ NPR
Sbjct: 17 LNTNVDGRTKVMYALTQIRGIGRRFANVVCKKAEIDMGKRAGELSAAELESLMVIVANPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q++IPDWFLNRQKD DGKY Q LTS A LD+KLR+DLERLKKIR HRG+RHYWG+RVR
Sbjct: 77 QFRIPDWFLNRQKDYKDGKYVQ--LTSNA-LDTKLRDDLERLKKIRNHRGLRHYWGIRVR 133
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 134 GQHTKTTGRR 143
>gi|50288491|ref|XP_446675.1| 40S ribosomal protein S18 [Candida glabrata CBS 138]
gi|49525983|emb|CAG59602.1| unnamed protein product [Candida glabrata]
Length = 147
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 110/130 (84%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR++N+V KKAD+DLNKRAGE ++EE+++++ IM NP
Sbjct: 19 LNTNVDGNIKIVYALTTIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIMQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+DI DGK L Q++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QYKIPAWFLNRQRDIADGKDYHTL---ANQVESKLRDDLERLKKIRAHRGIRHFWGLRVR 135
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 136 GQHTKTTGRR 145
>gi|28189422|dbj|BAC56379.1| similar to 40S ribosomal protein S18 [Bos taurus]
gi|28189799|dbj|BAC56514.1| similar to ribosomal protein S18 [Bos taurus]
Length = 131
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 107/119 (89%), Gaps = 3/119 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>gi|167378734|ref|XP_001734909.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760]
gi|167381370|ref|XP_001735684.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760]
gi|183231655|ref|XP_654098.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS]
gi|183233172|ref|XP_653090.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS]
gi|165902209|gb|EDR28096.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760]
gi|165903334|gb|EDR28910.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760]
gi|169801707|gb|EAL47704.2| 40S ribosomal protein S18, putative [Entamoeba histolytica
HM-1:IMSS]
gi|169802392|gb|EAL48712.2| 40S ribosomal protein S18, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 155
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 115/139 (82%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DG+RKV +ALT IKGCGRR++ +V K+A ID+NKRAG + E++KI+ I+ NP
Sbjct: 18 NTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDILNNPLN 77
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YKIP WFLNRQKD DGK SQ++ + ++++LRED+E LKK+RAHRG+RHYWGLRVRG
Sbjct: 78 YKIPVWFLNRQKDNKDGKDSQLIANA---VETRLREDIEALKKMRAHRGLRHYWGLRVRG 134
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRGRTVGVS+ K
Sbjct: 135 QHTKTTGRRGRTVGVSRTK 153
>gi|28189549|dbj|BAC56389.1| similar to ribosomal protein S18 [Bos taurus]
Length = 125
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 107/119 (89%), Gaps = 3/119 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 10 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 69
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 70 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 125
>gi|67478589|ref|XP_654681.1| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS]
gi|167379766|ref|XP_001735274.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760]
gi|56471746|gb|EAL49291.1| 40S ribosomal protein S18, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902807|gb|EDR28533.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760]
gi|407034223|gb|EKE37121.1| ribosomal protein S13p/S18e protein [Entamoeba nuttalli P19]
gi|449706474|gb|EMD46312.1| ribosomal protein S13p/S18e protein [Entamoeba histolytica KU27]
gi|449707629|gb|EMD47262.1| ribosomal protein S13p/S18e protein [Entamoeba histolytica KU27]
Length = 143
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 115/139 (82%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DG+RKV +ALT IKGCGRR++ +V K+A ID+NKRAG + E++KI+ I+ NP
Sbjct: 6 NTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDILNNPLN 65
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YKIP WFLNRQKD DGK SQ++ + ++++LRED+E LKK+RAHRG+RHYWGLRVRG
Sbjct: 66 YKIPVWFLNRQKDNKDGKDSQLIANA---VETRLREDIEALKKMRAHRGLRHYWGLRVRG 122
Query: 122 QHTKTTGRRGRTVGVSKKK 140
QHTKTTGRRGRTVGVS+ K
Sbjct: 123 QHTKTTGRRGRTVGVSRTK 141
>gi|255087650|ref|XP_002505748.1| ribosomal protein S18 [Micromonas sp. RCC299]
gi|226521018|gb|ACO67006.1| ribosomal protein S18 [Micromonas sp. RCC299]
Length = 145
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 112/132 (84%), Gaps = 3/132 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KVM+ALT I+G GRRFSN+V KKA+ID+ KRAGE S E++ ++ I++NPR
Sbjct: 16 LNTNVDGRTKVMYALTQIRGIGRRFSNVVCKKAEIDMGKRAGELSAAELESLMVIVSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q++IPDWFLNRQK+ DGKY Q + + QLD+ LR+DLERLKKIR HRG+RHYWG+RVR
Sbjct: 76 QFRIPDWFLNRQKNYKDGKYIQQV---SNQLDTSLRDDLERLKKIRNHRGLRHYWGIRVR 132
Query: 121 GQHTKTTGRRGR 132
GQHTKTTGRRG+
Sbjct: 133 GQHTKTTGRRGK 144
>gi|346473986|gb|AEO36837.1| hypothetical protein [Amblyomma maculatum]
Length = 120
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/123 (71%), Positives = 106/123 (86%), Gaps = 3/123 (2%)
Query: 12 MFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNR 71
MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S E++ ++TI+ NPRQ+KIPDWFLNR
Sbjct: 1 MFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMTIVANPRQFKIPDWFLNR 60
Query: 72 QKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRG 131
+KD DG+YSQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVRGQHTKTTGRRG
Sbjct: 61 KKDYKDGRYSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRG 117
Query: 132 RTV 134
+T
Sbjct: 118 KTA 120
>gi|148665247|gb|EDK97663.1| mCG1037936 [Mus musculus]
Length = 151
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 118/140 (84%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++T+IDG++K+ F +TAIK GR ++++VL+K DIDL K AGE +E+EV+++ITIM NPR
Sbjct: 16 LNTDIDGRQKIGFTITAIKVVGRSYAHVVLRKTDIDLTK-AGERTEDEVERVITIMQNPR 74
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QY+IPDWFLNRQKD GKYSQ L + D+KLREDLE+LKKIRAHRG+RH+ GL VR
Sbjct: 75 QYRIPDWFLNRQKDGKGGKYSQALASGP---DNKLREDLEQLKKIRAHRGLRHFCGLLVR 131
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKK+
Sbjct: 132 GQHTKTTGRRGRTVGVSKKE 151
>gi|209880283|ref|XP_002141581.1| 40S ribosomal protein S18 [Cryptosporidium muris RN66]
gi|209557187|gb|EEA07232.1| 40S ribosomal protein S18, putative [Cryptosporidium muris RN66]
Length = 153
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 115/140 (82%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TN+DG++KVM+ALTAIKG GRRFSNIV KKAD+DL KRAG+ +++EV++I+ I+TNP
Sbjct: 17 MNTNVDGRQKVMYALTAIKGIGRRFSNIVCKKADVDLRKRAGQLTQDEVNRIVAIVTNPL 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+ IP + LNRQ+D+ DGKY + ++ L++ LREDLERLKKIR+HRG+RH+WG+RVR
Sbjct: 77 QFNIPSYMLNRQRDLKDGKYKHM---TSNNLEASLREDLERLKKIRSHRGLRHHWGIRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR R KKK
Sbjct: 134 GQHTKTTGRGCRVASSGKKK 153
>gi|321263256|ref|XP_003196346.1| ribosomal protein S18 [Cryptococcus gattii WM276]
gi|317462822|gb|ADV24559.1| ribosomal protein S18, putative [Cryptococcus gattii WM276]
Length = 155
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G K+M+ALT IKG GRR++N+V KKAD+DLNKRAGE + +E+++I+TIM NP
Sbjct: 19 LNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIMQNPA 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DI DGK IL + +D +LREDLERLKKIR HRG+RH+WGL+VR
Sbjct: 79 QFKIPSWFLNRQRDITDGKSQHIL---SNVIDQRLREDLERLKKIRTHRGLRHHWGLKVR 135
Query: 121 GQHTKTTGRR-GRTVGVSKK 139
GQHTKTTGRR GR V KK
Sbjct: 136 GQHTKTTGRRVGRAVAGKKK 155
>gi|429328479|gb|AFZ80239.1| 40S ribosomal protein S18, putative [Babesia equi]
Length = 154
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 115/140 (82%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KV+ ALTAI+G GRR + +V K+A ID+ KRAGE +++E++K++TI+ +P
Sbjct: 18 LNTNVDGREKVIIALTAIRGVGRRMATVVCKEAGIDVTKRAGELTQDEINKVVTIIGSPA 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD+ +GK+ + + LDS LREDLERLKK+R HRG+RHYWGLR R
Sbjct: 78 QFKIPSWFLNRQKDVKEGKH---MHHAANALDSCLREDLERLKKMRLHRGLRHYWGLRTR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR GRTVGV+KKK
Sbjct: 135 GQHTKTTGRHGRTVGVAKKK 154
>gi|410078207|ref|XP_003956685.1| hypothetical protein KAFR_0C05590 [Kazachstania africana CBS 2517]
gi|410082912|ref|XP_003959034.1| hypothetical protein KAFR_0I01180 [Kazachstania africana CBS 2517]
gi|372463269|emb|CCF57550.1| hypothetical protein KAFR_0C05590 [Kazachstania africana CBS 2517]
gi|372465624|emb|CCF59899.1| hypothetical protein KAFR_0I01180 [Kazachstania africana CBS 2517]
Length = 146
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 109/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKADIDLNKRAGE ++EE+++++ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTLIKGVGRRYSNLVCKKADIDLNKRAGELTQEELERVVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKDI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 HYKIPSWFLNRQKDIADGKDYHSLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|444728337|gb|ELW68795.1| 40S ribosomal protein S18 [Tupaia chinensis]
Length = 150
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 114/140 (81%), Gaps = 5/140 (3%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+ FA+TAIKG G+R++++VL+KAD DL KRAGE +EEEV ++ITIM NPR
Sbjct: 16 LNTNIDGRWKIAFAITAIKGVGQRYAHVVLRKADTDLTKRAGELTEEEVGRVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QY IP WF NRQKD+ DGKYSQ+L LD+KLREDL+RLKKIRAH+G+RH+W L VR
Sbjct: 76 QYMIPHWFSNRQKDVKDGKYSQVLANG---LDNKLREDLKRLKKIRAHKGLRHFWDLWVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
G H TTG RG T+GV KKK
Sbjct: 133 GPH--TTGCRGHTMGVPKKK 150
>gi|344233630|gb|EGV65502.1| 40S ribosomal protein S18 [Candida tenuis ATCC 10573]
Length = 145
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 110/129 (85%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR+SN+V KKAD+DLNKRAGE ++EE+++++TIM NP
Sbjct: 18 LNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L QL+SKLR+DLE+LKKIRAHRG+RH+WGL+VR
Sbjct: 78 NYKIPAWFLNRQKDQVDGKDYHVL---ANQLESKLRDDLEKLKKIRAHRGIRHFWGLKVR 134
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 135 GQHTKTTSR 143
>gi|58259960|ref|XP_567390.1| ribosomal protein S18 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116184|ref|XP_773263.1| 40S ribosomal protein S18 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|50255885|gb|EAL18616.1| hypothetical protein CNBJ0410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229440|gb|AAW45873.1| ribosomal protein S18, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 155
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G K+M+ALT IKG GRR++N+V KKAD+DLNKRAGE + +E+++I+TIM NP
Sbjct: 19 LNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIMQNPA 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DI DGK IL + +D +LREDLERLKKIR HRG+RH+WGL+VR
Sbjct: 79 QFKIPSWFLNRQRDISDGKSQHIL---SNVIDQRLREDLERLKKIRTHRGLRHHWGLKVR 135
Query: 121 GQHTKTTGRR-GRTVGVSKK 139
GQHTKTTGRR GR V KK
Sbjct: 136 GQHTKTTGRRVGRAVAGKKK 155
>gi|444711386|gb|ELW52332.1| 40S ribosomal protein S18 [Tupaia chinensis]
Length = 151
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 108/131 (82%), Gaps = 3/131 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNI+ + K+ FA+TAIKG GR +++VL+KADIDL KRAGE EEEV++ ITI NP
Sbjct: 16 LNTNINERWKIAFAITAIKGVGRTHAHVVLRKADIDLTKRAGELPEEEVERAITIKQNPC 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGK SQ+L LD+KLREDLERLKKIRAHRG+ H+WGLRVR
Sbjct: 76 QYKIPDWFLNRQKDVKDGKNSQVLANG---LDNKLREDLERLKKIRAHRGLHHFWGLRVR 132
Query: 121 GQHTKTTGRRG 131
GQHTKTTG RG
Sbjct: 133 GQHTKTTGHRG 143
>gi|66359256|ref|XP_626806.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum
Iowa II]
gi|67616771|ref|XP_667506.1| ribosomal protein S18 [Cryptosporidium hominis TU502]
gi|46228176|gb|EAK89075.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum
Iowa II]
gi|54658642|gb|EAL37270.1| ribosomal protein S18 [Cryptosporidium hominis]
Length = 153
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 111/129 (86%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TN+DG++K+M+ALTAIKG GRRFSNIV KKAD++L+KRAG+ S+EE+++I+ I+ NP
Sbjct: 17 MNTNVDGRQKIMYALTAIKGIGRRFSNIVCKKADVNLSKRAGQLSQEEINRIVAIVANPL 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+ IP + LNRQKD+ DGKY I ++ L++ LREDLERLKKIR+HRG+RH+WG+RVR
Sbjct: 77 QFNIPSYMLNRQKDVKDGKYKHI---TSNNLEASLREDLERLKKIRSHRGLRHHWGVRVR 133
Query: 121 GQHTKTTGR 129
GQHTKTTGR
Sbjct: 134 GQHTKTTGR 142
>gi|84999324|ref|XP_954383.1| ribosomal protein s18 [Theileria annulata]
gi|65305381|emb|CAI73706.1| ribosomal protein s18, putative [Theileria annulata]
Length = 154
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 117/140 (83%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KV+ ALTAI+G GRRF+ +V K+A +D+ KRAGE +++E++K++ I+++P
Sbjct: 18 LNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDVTKRAGELTQDEINKLVAIISSPA 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++K+P WFLNRQKD+ +GK+ + ++ LDS LREDLERLKK+R HRG+RHYWGLR R
Sbjct: 78 EFKVPHWFLNRQKDVKEGKH---MHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRTR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR GRTVGV+KKK
Sbjct: 135 GQHTKTTGRHGRTVGVAKKK 154
>gi|145357113|ref|XP_001422767.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144583010|gb|ABP01084.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 144
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 111/129 (86%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KVM++LT IKG GRRFSN+V KKA+IDL KRAGE S E++ ++ I++NPR
Sbjct: 16 LNTNVDGREKVMYSLTKIKGIGRRFSNLVCKKAEIDLGKRAGELSAAELESLMVIVSNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q++IPDWFLNR+ D DGK+SQ++ + QLD+KLR+DLERLKK+R HRG+RHYWG+RVR
Sbjct: 76 QFRIPDWFLNRKHDFKDGKFSQLV---SNQLDTKLRDDLERLKKMRNHRGLRHYWGIRVR 132
Query: 121 GQHTKTTGR 129
GQHTKTTGR
Sbjct: 133 GQHTKTTGR 141
>gi|71032473|ref|XP_765878.1| 40S ribosomal protein S18 [Theileria parva strain Muguga]
gi|68352835|gb|EAN33595.1| 40S ribosomal protein S18, putative [Theileria parva]
Length = 154
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 117/140 (83%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KV+ ALTAI+G GRRF+ +V K+A +D+ KRAGE +++E++K++ I+++P
Sbjct: 18 LNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDITKRAGELTQDEINKLVAIISSPA 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++K+P WFLNRQKD+ +GK+ + ++ LDS LREDLERLKK+R HRG+RHYWGLR R
Sbjct: 78 EFKVPHWFLNRQKDVKEGKH---MHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRTR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR GRTVGV+KKK
Sbjct: 135 GQHTKTTGRHGRTVGVAKKK 154
>gi|405122568|gb|AFR97334.1| ribosomal protein S18 [Cryptococcus neoformans var. grubii H99]
Length = 155
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G K+M+ALT IKG GRR++N+V KKAD+DLNKRAGE + +E+++I+TIM NP
Sbjct: 19 LNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIMQNPA 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQ+DI DGK IL + +D +LREDLERLKKIR HRG+RH+WGL+VR
Sbjct: 79 QFKIPSWFLNRQRDINDGKSQHIL---SNVIDQRLREDLERLKKIRTHRGLRHHWGLKVR 135
Query: 121 GQHTKTTGRR-GRTVGVSKK 139
GQHTKTTGRR GR V KK
Sbjct: 136 GQHTKTTGRRVGRAVAGKKK 155
>gi|403220722|dbj|BAM38855.1| ribosomal protein S18 [Theileria orientalis strain Shintoku]
Length = 180
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 114/139 (82%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KV+ ALTAI+G GRRF+ +V K+A +D+ KRAGE + +E++K++TI+ +P
Sbjct: 18 LNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDVTKRAGELTADEINKLVTIIGSPA 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD+ +GK+ + + LDS LREDLERLKK+R HRG+RHYWGLR R
Sbjct: 78 QFKIPYWFLNRQKDVKEGKH---MHNTANTLDSCLREDLERLKKMRLHRGLRHYWGLRTR 134
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKTTGR GRTVGV+KK
Sbjct: 135 GQHTKTTGRHGRTVGVAKK 153
>gi|344299791|gb|EGW30144.1| 40S ribosomal protein S18 [Spathaspora passalidarum NRRL Y-27907]
Length = 145
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 110/129 (85%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR+SN+V KKAD+DLNKRAGE ++EE+++I+TIM NP
Sbjct: 18 LNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + L+SKLR+DLERLKK+RAHRG+RH+WGL+VR
Sbjct: 78 NYKIPAWFLNRQKDHVDGKDYHVLANN---LESKLRDDLERLKKMRAHRGIRHFWGLKVR 134
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 135 GQHTKTTSR 143
>gi|210075787|ref|XP_503080.2| 40S ribosomal protein S18 [Yarrowia lipolytica]
gi|199425832|emb|CAG81272.2| YALI0D20614p [Yarrowia lipolytica CLIB122]
Length = 152
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 113/135 (83%), Gaps = 3/135 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ KVM+A+ IKG GRR++N+V KKAD+DL+KRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGRIKVMYAMCKIKGVGRRYANLVCKKADVDLSKRAGELTVEELERIVTIIQNPG 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+D DGK SQ+L+ QLD KLR+D+ERLKKIRAHRG+RHYWG +VR
Sbjct: 78 QYKIPGWFLNRQRDFTDGKDSQLLVN---QLDVKLRDDIERLKKIRAHRGLRHYWGYKVR 134
Query: 121 GQHTKTTGRRGRTVG 135
GQHTKTT R+G+ +
Sbjct: 135 GQHTKTTTRKGKIMA 149
>gi|149234674|ref|XP_001523216.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239]
gi|146453005|gb|EDK47261.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239]
Length = 145
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 110/129 (85%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR+SN+V KKAD+DLNKRAGE ++EE+++I+TIM NP
Sbjct: 18 LNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + L+SKLR+DLERLKKIR+HRG+RH+WGL+VR
Sbjct: 78 NYKIPAWFLNRQKDQVDGKDYHVLANN---LESKLRDDLERLKKIRSHRGIRHFWGLKVR 134
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 135 GQHTKTTSR 143
>gi|366994412|ref|XP_003676970.1| hypothetical protein NCAS_0F01310 [Naumovozyma castellii CBS 4309]
gi|366996340|ref|XP_003677933.1| hypothetical protein NCAS_0H02760 [Naumovozyma castellii CBS 4309]
gi|342302838|emb|CCC70615.1| hypothetical protein NCAS_0F01310 [Naumovozyma castellii CBS 4309]
gi|342303803|emb|CCC71586.1| hypothetical protein NCAS_0H02760 [Naumovozyma castellii CBS 4309]
Length = 145
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 110/130 (84%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR++N+V KKADIDL+KRAGE ++EE+++++ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIKGVGRRYANLVCKKADIDLHKRAGELTQEELERVVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQKDI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 QYKIPAWFLNRQKDINDGKDYHTLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|367008946|ref|XP_003678974.1| 40S ribosomal protein S18 [Torulaspora delbrueckii]
gi|359746631|emb|CCE89763.1| hypothetical protein TDEL_0A04310 [Torulaspora delbrueckii]
Length = 147
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 109/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG KV++ALT IKG GRR++N+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 19 LNTNVDGNIKVVYALTTIKGVGRRYANLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+D+ DGK L ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 QYKIPAWFLNRQRDVTDGKDYHTLANG---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 135
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 136 GQHTKTTGRR 145
>gi|365984315|ref|XP_003668990.1| ribosomal protein S18 [Naumovozyma dairenensis CBS 421]
gi|365989538|ref|XP_003671599.1| ribosomal protein S18 [Naumovozyma dairenensis CBS 421]
gi|343767758|emb|CCD23747.1| hypothetical protein NDAI_0C00860 [Naumovozyma dairenensis CBS 421]
gi|343770372|emb|CCD26356.1| hypothetical protein NDAI_0H01820 [Naumovozyma dairenensis CBS 421]
Length = 146
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 109/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKDI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 HYKIPAWFLNRQKDITDGKDYHSLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|254569222|ref|XP_002491721.1| 40S ribosomal protein S18 [Komagataella pastoris GS115]
gi|238031518|emb|CAY69441.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328351775|emb|CCA38174.1| 40S ribosomal protein S18 [Komagataella pastoris CBS 7435]
Length = 153
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 112/135 (82%), Gaps = 4/135 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ K+M+ALT I+G GRR+SN+V KKAD+DLNKRAGE ++EE+++++TIM NP
Sbjct: 21 LNTNVDGRIKIMYALTTIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIMQNPT 80
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQ+D VDGK L S L+SK R+D+ERLKKIRAHRG+RH WGL+VR
Sbjct: 81 QYKIPAWFLNRQRDTVDGKDYHTLANS---LESKYRDDIERLKKIRAHRGIRHAWGLKVR 137
Query: 121 GQHTKTTGRRGRTVG 135
GQHTKTT RG+ +G
Sbjct: 138 GQHTKTTS-RGKFIG 151
>gi|448537138|ref|XP_003871273.1| Rps18 predicted ribosomal protein [Candida orthopsilosis Co 90-125]
gi|354544312|emb|CCE41035.1| hypothetical protein CPAR2_300240 [Candida parapsilosis]
gi|380355630|emb|CCG25148.1| Rps18 predicted ribosomal protein [Candida orthopsilosis]
Length = 145
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 110/129 (85%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR+SN+V KKAD+DL+KRAGE ++EE+++I+TIM NP
Sbjct: 18 LNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + L+SKLR+DLERLKKIRAHRG+RH+WGL+VR
Sbjct: 78 NYKIPAWFLNRQKDQVDGKDYHVLANN---LESKLRDDLERLKKIRAHRGIRHFWGLKVR 134
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 135 GQHTKTTSR 143
>gi|294658981|ref|XP_461313.2| 40S ribosomal protein S18 [Debaryomyces hansenii CBS767]
gi|202953527|emb|CAG89714.2| DEHA2F22308p [Debaryomyces hansenii CBS767]
Length = 165
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 109/129 (84%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR+SN+V KKAD+DL KRAGE ++EE+++I+TIM NP
Sbjct: 38 LNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIMQNPT 97
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + L+SKLR+DLERLKKIRAHRG+RH+WGL+VR
Sbjct: 98 NYKIPAWFLNRQKDQVDGKDYHVLANN---LESKLRDDLERLKKIRAHRGIRHFWGLKVR 154
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 155 GQHTKTTSR 163
>gi|6320658|ref|NP_010738.1| ribosomal 40S subunit protein S18A [Saccharomyces cerevisiae S288c]
gi|6323615|ref|NP_013686.1| ribosomal 40S subunit protein S18B [Saccharomyces cerevisiae S288c]
gi|338819321|sp|P0CX55.1|RS18A_YEAST RecName: Full=40S ribosomal protein S18-A
gi|338819322|sp|P0CX56.1|RS18B_YEAST RecName: Full=40S ribosomal protein S18-B
gi|313103676|pdb|3IZB|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113459|pdb|3O2Z|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113487|pdb|3O30|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|364506114|pdb|3U5C|S Chain S, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506152|pdb|3U5G|S Chain S, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|575693|emb|CAA86629.1| unnamed protein product [Saccharomyces cerevisiae]
gi|927725|gb|AAB64891.1| Ydr450wp [Saccharomyces cerevisiae]
gi|151942415|gb|EDN60771.1| ribosomal protein S18A [Saccharomyces cerevisiae YJM789]
gi|151946135|gb|EDN64366.1| ribosomal protein S18B [Saccharomyces cerevisiae YJM789]
gi|190408214|gb|EDV11479.1| ribosomal protein S18A [Saccharomyces cerevisiae RM11-1a]
gi|259145683|emb|CAY78947.1| Rps18ap [Saccharomyces cerevisiae EC1118]
gi|259148549|emb|CAY81794.1| Rps18bp [Saccharomyces cerevisiae EC1118]
gi|285811461|tpg|DAA12285.1| TPA: ribosomal 40S subunit protein S18A [Saccharomyces cerevisiae
S288c]
gi|285813977|tpg|DAA09872.1| TPA: ribosomal 40S subunit protein S18B [Saccharomyces cerevisiae
S288c]
gi|349577494|dbj|GAA22663.1| K7_Rps18ap [Saccharomyces cerevisiae Kyokai no. 7]
gi|349580259|dbj|GAA25419.1| K7_Rps18bp [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297556|gb|EIW08656.1| Rps18ap [Saccharomyces cerevisiae CEN.PK113-7D]
gi|392300567|gb|EIW11658.1| Rps18ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 146
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ DI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 HYKIPAWFLNRQNDITDGKDYHTLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|256273632|gb|EEU08559.1| Rps18ap [Saccharomyces cerevisiae JAY291]
Length = 147
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 19 LNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ DI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 79 HYKIPAWFLNRQNDITDGKDYHTLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 135
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 136 GQHTKTTGRR 145
>gi|119624101|gb|EAX03696.1| ribosomal protein S18, isoform CRA_c [Homo sapiens]
Length = 128
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/116 (72%), Positives = 104/116 (89%), Gaps = 3/116 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWG 116
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WG
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWG 128
>gi|403214288|emb|CCK68789.1| hypothetical protein KNAG_0B03470 [Kazachstania naganishii CBS
8797]
gi|403214887|emb|CCK69387.1| hypothetical protein KNAG_0C02760 [Kazachstania naganishii CBS
8797]
Length = 146
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 109/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKADI+LNKRAGE ++EE+++++ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADINLNKRAGELTQEELERVVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFL+RQKDI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 HYKIPAWFLSRQKDIADGKDYHPLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|399216682|emb|CCF73369.1| unnamed protein product [Babesia microti strain RI]
Length = 491
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 109/136 (80%), Gaps = 3/136 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG+ KV+ ALTAI+G GRR S ++ K++ +DLNKRAGE +EEE+DKI IM+NP Q
Sbjct: 19 NTNIDGREKVVIALTAIRGIGRRISTVICKESGVDLNKRAGELTEEEIDKICAIMSNPTQ 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP WFLNRQKD +GK ++ + LDS LR+DLERLKK+R HRG+RHYWGLRVRG
Sbjct: 79 FMIPSWFLNRQKDYKEGKNFHVV---SNALDSALRDDLERLKKMRLHRGLRHYWGLRVRG 135
Query: 122 QHTKTTGRRGRTVGVS 137
QHTK+TGR G+TVG S
Sbjct: 136 QHTKSTGRHGKTVGKS 151
>gi|146422129|ref|XP_001487006.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260]
gi|146388127|gb|EDK36285.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260]
Length = 145
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 109/129 (84%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR+SN+V KKAD+DL KRAGE ++EE+++I+TIM NP
Sbjct: 18 LNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + ++SKLR+DLERLKKIRAHRG+RH+WGL+VR
Sbjct: 78 NYKIPAWFLNRQKDQVDGKDYHVLANN---MESKLRDDLERLKKIRAHRGIRHFWGLKVR 134
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 135 GQHTKTTSR 143
>gi|45190917|ref|NP_985171.1| 40S ribosomal protein S18 [Ashbya gossypii ATCC 10895]
gi|44983985|gb|AAS52995.1| AER315Cp [Ashbya gossypii ATCC 10895]
gi|374108396|gb|AEY97303.1| FAER315Cp [Ashbya gossypii FDAG1]
Length = 146
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 109/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT I+G GRR++N++ KKAD+DLNKRAGE ++EE+++++ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIRGVGRRYANLICKKADVDLNKRAGELTQEELERVVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD+ DGK L + L+SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 HYKIPAWFLNRQKDVNDGKDYHSLANN---LESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|49258832|pdb|1S1H|M Chain M, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 132
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 4 LNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 63
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ DI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 64 HYKIPAWFLNRQNDITDGKDYHTLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 120
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 121 GQHTKTTGRR 130
>gi|281500818|pdb|3JYV|M Chain M, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 130
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 3 LNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ DI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 63 HYKIPAWFLNRQNDITDGKDYHTLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 119
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 120 GQHTKTTGRR 129
>gi|300121915|emb|CBK22489.2| unnamed protein product [Blastocystis hominis]
Length = 163
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 116/140 (82%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGK+K+++ALT+IKG GRRF+ V KKA+ID+++RAGE S +E++K+I +++ P
Sbjct: 27 LNTNIDGKQKIVYALTSIKGIGRRFAMAVCKKAEIDISRRAGELSNDEIEKLIAVISTPL 86
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+ IP+WFLNRQKD+ GKY Q++ + L + LREDL RLKK+RA+RG+RHYW L+VR
Sbjct: 87 QFDIPEWFLNRQKDVETGKYRQVV---SNNLQANLREDLNRLKKMRANRGLRHYWNLKVR 143
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G++VGVS KK
Sbjct: 144 GQHTKTTGRFGKSVGVSTKK 163
>gi|254582072|ref|XP_002497021.1| 40S ribosomal protein S18 [Zygosaccharomyces rouxii]
gi|238939913|emb|CAR28088.1| ZYRO0D13574p [Zygosaccharomyces rouxii]
Length = 146
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 110/130 (84%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG KV++ALT IKG GRR++N+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNIKVVYALTTIKGVGRRYANLVCKKADVDLSKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFL+RQKD+ DGK +L ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 QYKIPTWFLSRQKDVNDGKDHHMLANG---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGR+
Sbjct: 135 GQHTKTTGRK 144
>gi|355756199|gb|EHH59946.1| hypothetical protein EGM_10181 [Macaca fascicularis]
Length = 148
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 113/140 (80%), Gaps = 7/140 (5%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNID +RK FA+TAIKG G R+++ VL+KADIDL KRAGE +EE V+++IT+ NPR
Sbjct: 16 LNTNIDRRRKTAFAITAIKGVGGRYAHAVLRKADIDLTKRAGELTEE-VERVITLTQNPR 74
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ D KYSQ+L D+KLREDLER+KKIRA RG+ H+WGLRVR
Sbjct: 75 QYKIPDWFLNRQKDVKDEKYSQVLANGP---DNKLREDLERVKKIRARRGLCHFWGLRVR 131
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTT G VGVSKKK
Sbjct: 132 GQHTKTT---GLAVGVSKKK 148
>gi|301117146|ref|XP_002906301.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4]
gi|262107650|gb|EEY65702.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4]
Length = 152
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/136 (63%), Positives = 111/136 (81%), Gaps = 3/136 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKV ALTAI+G GRRFS +V KKA++D+ KRAGE + +E+++++ I+ NP
Sbjct: 16 LNTNIDGRRKVWVALTAIQGVGRRFSIMVCKKAEVDVTKRAGELTNDEIERVVAIIQNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD GK+SQ++ + L K RED ERLKKI AHRG+RH+WGL+VR
Sbjct: 76 QFKIPVWFLNRQKDFKTGKHSQVVANN---LQGKWREDYERLKKIYAHRGLRHWWGLKVR 132
Query: 121 GQHTKTTGRRGRTVGV 136
GQHTKTTGRRGRTVG+
Sbjct: 133 GQHTKTTGRRGRTVGI 148
>gi|256270865|gb|EEU06003.1| Rps18bp [Saccharomyces cerevisiae JAY291]
Length = 146
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQ DI +GK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 HYKIPAWFLNRQNDITNGKDYHTLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|448083980|ref|XP_004195491.1| Piso0_004882 [Millerozyma farinosa CBS 7064]
gi|359376913|emb|CCE85296.1| Piso0_004882 [Millerozyma farinosa CBS 7064]
Length = 145
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 110/129 (85%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ K+M+ALT I+G GRR++N+V KKAD++L+KRAGE ++EE+++I+TIM NP
Sbjct: 18 LNTNLDGRIKIMYALTKIRGVGRRYANLVCKKADVNLSKRAGELTQEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + L+SKLREDLERLKKIR+HRG+RH+WGL+VR
Sbjct: 78 NYKIPAWFLNRQKDQVDGKDYHVLANN---LESKLREDLERLKKIRSHRGIRHFWGLKVR 134
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 135 GQHTKTTSR 143
>gi|156847769|ref|XP_001646768.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM
70294]
gi|156117448|gb|EDO18910.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM
70294]
Length = 146
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 109/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR++N+V KKAD+DLNKRAGE ++EE+++++ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTYIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+KIP WFLNRQKD+ DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 NFKIPAWFLNRQKDVNDGKDYHSLANN---IESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|1350948|sp|P48151.1|RS18_ENTHI RecName: Full=40S ribosomal protein S18
gi|509603|gb|AAD09140.1| ribosomal protein S18 [Entamoeba histolytica]
Length = 155
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 114/139 (82%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DG+RKV +ALT IKGCGRR++ +V K+A ID+NKRAG + E++KI+ I+T
Sbjct: 18 NTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDILTTQLN 77
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YKIP WFLNRQKD DGK SQ++ + ++++LRED+E LKK+RAHRG+RHYWGLRVRG
Sbjct: 78 YKIPVWFLNRQKDNKDGKDSQLIANA---VETRLREDIEALKKMRAHRGLRHYWGLRVRG 134
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q+TKTTGRRGRTVGVS+ K
Sbjct: 135 QNTKTTGRRGRTVGVSRTK 153
>gi|448079467|ref|XP_004194392.1| Piso0_004882 [Millerozyma farinosa CBS 7064]
gi|359375814|emb|CCE86396.1| Piso0_004882 [Millerozyma farinosa CBS 7064]
Length = 145
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 110/129 (85%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG+ K+M+ALT I+G GRR++N+V KKAD+DL+KRAGE ++EE+++I+TIM NP
Sbjct: 18 LNTNLDGRIKIMYALTKIRGVGRRYANLVCKKADVDLSKRAGELTQEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + L+SKLR+DLERLKKIR+HRG+RH+WGL+VR
Sbjct: 78 NYKIPAWFLNRQKDQVDGKDYHVLANN---LESKLRDDLERLKKIRSHRGIRHFWGLKVR 134
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 135 GQHTKTTSR 143
>gi|363751563|ref|XP_003645998.1| hypothetical protein Ecym_4102 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889633|gb|AET39181.1| hypothetical protein Ecym_4102 [Eremothecium cymbalariae
DBVPG#7215]
Length = 146
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 109/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT I+G GRR++N++ KKAD+DLNKRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNVKIVYALTTIRGVGRRYANLICKKADVDLNKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD+ DGK L + L+SKLR+DLERLKK+R+HRG+RH+WGLRVR
Sbjct: 78 HYKIPAWFLNRQKDVNDGKDYHSLANN---LESKLRDDLERLKKMRSHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|126136941|ref|XP_001384994.1| 40S ribosomal protein S18 [Scheffersomyces stipitis CBS 6054]
gi|126092216|gb|ABN66965.1| ribosomal protein S18B [Scheffersomyces stipitis CBS 6054]
Length = 145
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 109/129 (84%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR++N+V KKAD+DL KRAGE ++EE+++I+TIM NP
Sbjct: 18 LNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVDLTKRAGELTQEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YK+P WFLNRQKD VDGK +L + L+SKLR+DLERLKKIR+HRG+RH+WGL+VR
Sbjct: 78 NYKVPAWFLNRQKDHVDGKDYHVLANN---LESKLRDDLERLKKIRSHRGIRHFWGLKVR 134
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 135 GQHTKTTSR 143
>gi|403358374|gb|EJY78832.1| Ribosomal protein S18 [Oxytricha trifallax]
Length = 155
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 113/139 (81%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN++GKRKVMFAL IKG GRRFSN++LK A IDLNKRAGE +E+E++K+ I+ P
Sbjct: 20 NTNVEGKRKVMFALRVIKGVGRRFSNLILKIAQIDLNKRAGELTEQEIEKVNDILAKPTD 79
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP WFLNRQ+DI DG ++Q++ + LD+KLREDLER+KKIR +RG+RH+ G +VRG
Sbjct: 80 YNIPKWFLNRQRDIRDGNWTQLI---SNALDTKLREDLERMKKIRCNRGLRHFLGHKVRG 136
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+TGR GRT+GV+KKK
Sbjct: 137 QKTKSTGRTGRTLGVTKKK 155
>gi|384402816|gb|AFH88775.1| ribosomal protein S18, partial [Gammarus minus]
Length = 120
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/120 (68%), Positives = 106/120 (88%), Gaps = 3/120 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK +ALTAIKG GRRF++++L+KADID +KRAGE +E+EV++++TI+ NPR
Sbjct: 4 LNTNIDGRRKAGYALTAIKGVGRRFAHVILRKADIDASKRAGELTEDEVERVMTIIANPR 63
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKDI DGKYSQ+ ++ LD+K+REDLER+KKIR HRG+RHYW LRVR
Sbjct: 64 QYKIPDWFLNRQKDIKDGKYSQV---TSNNLDTKVREDLERMKKIRVHRGLRHYWNLRVR 120
>gi|50303317|ref|XP_451600.1| 40S ribosomal protein S18 [Kluyveromyces lactis NRRL Y-1140]
gi|49640732|emb|CAH01993.1| KLLA0B01562p [Kluyveromyces lactis]
Length = 146
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG V++ALT I+G GRR++N+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNINVVYALTTIRGVGRRYANLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD+ DGK L + L+SKLR+DLERLKKIR+HRG+RH+WGLRVR
Sbjct: 78 HYKIPAWFLNRQKDVNDGKDYHSLANN---LESKLRDDLERLKKIRSHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|241957179|ref|XP_002421309.1| 40S ribosomal protein S18 [Candida dubliniensis CD36]
gi|223644653|emb|CAX40643.1| 40S ribosomal protein (S18), putative [Candida dubliniensis CD36]
gi|238883265|gb|EEQ46903.1| 40S ribosomal protein S18 [Candida albicans WO-1]
Length = 145
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 109/129 (84%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR++N+V KKAD++L KRAGE ++EE+++I+TIM NP
Sbjct: 18 LNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + L+SKLR+DLERLKKIR+HRG+RH+WGL+VR
Sbjct: 78 NYKIPAWFLNRQKDQVDGKDYHVLANN---LESKLRDDLERLKKIRSHRGIRHFWGLKVR 134
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 135 GQHTKTTSR 143
>gi|68471071|ref|XP_720312.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314]
gi|77022566|ref|XP_888727.1| hypothetical protein CaO19_7018 [Candida albicans SC5314]
gi|46442174|gb|EAL01465.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314]
gi|76573540|dbj|BAE44624.1| hypothetical protein [Candida albicans]
Length = 135
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 109/129 (84%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR++N+V KKAD++L KRAGE ++EE+++I+TIM NP
Sbjct: 8 LNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNPT 67
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + L+SKLR+DLERLKKIR+HRG+RH+WGL+VR
Sbjct: 68 NYKIPAWFLNRQKDQVDGKDYHVLANN---LESKLRDDLERLKKIRSHRGIRHFWGLKVR 124
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 125 GQHTKTTSR 133
>gi|255717919|ref|XP_002555240.1| 40S ribosomal protein S18 [Lachancea thermotolerans]
gi|238936624|emb|CAR24803.1| KLTH0G04664p [Lachancea thermotolerans CBS 6340]
Length = 146
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT I+G GRR++N+V KKAD+ L KRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIRGVGRRYANLVCKKADVSLQKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQKD+ DGK L + L+SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 QYKIPAWFLNRQKDVNDGKDYHNLANN---LESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGR+
Sbjct: 135 GQHTKTTGRK 144
>gi|255731334|ref|XP_002550591.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404]
gi|240131600|gb|EER31159.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404]
Length = 133
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 109/129 (84%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+M+ALT I+G GRR++N+V KKAD++L KRAGE ++EE+++I+TIM NP
Sbjct: 6 LNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNPT 65
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKD VDGK +L + L+SKLR+DLERLKKIR+HRG+RH+WGL+VR
Sbjct: 66 NYKIPAWFLNRQKDQVDGKDYHVLANN---LESKLRDDLERLKKIRSHRGIRHFWGLKVR 122
Query: 121 GQHTKTTGR 129
GQHTKTT R
Sbjct: 123 GQHTKTTSR 131
>gi|326434114|gb|EGD79684.1| 40S ribosomal protein S18 [Salpingoeca sp. ATCC 50818]
Length = 154
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/140 (59%), Positives = 112/140 (80%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G+ +M++LTAI+G GRR+SN+ LKKA+I+ +RAG+ + ++VD+I+ +M NP
Sbjct: 16 LNTNLAGEENIMYSLTAIRGVGRRYSNLCLKKAEINQKQRAGQLNNDDVDRIVKVMQNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIP WFLNRQKD DG Y + L+SKLR+D ER+KK+R HRG+RH WG+RVR
Sbjct: 76 QYKIPKWFLNRQKDPKDGAYQHCVAND---LNSKLRDDFERMKKMRLHRGIRHMWGVRVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGV+KKK
Sbjct: 133 GQHTKTTGRRGKTVGVAKKK 152
>gi|361130049|gb|EHL01912.1| putative 40S ribosomal protein S18 [Glarea lozoyensis 74030]
Length = 151
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/122 (72%), Positives = 104/122 (85%), Gaps = 3/122 (2%)
Query: 19 KGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDG 78
+G R + + V KKAD+DLNKRAGE + EE+++I+TI+ NP QYKIP WFLNRQ+DIVDG
Sbjct: 31 EGYVRSYKDQVCKKADVDLNKRAGELTSEELERIVTIIQNPTQYKIPTWFLNRQRDIVDG 90
Query: 79 KYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSK 138
K SQ+L +DSKLR+DLERLKKIRAHRG+RHYWGLRVRGQH+KTTGRRGRTVGVSK
Sbjct: 91 KDSQVLANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRVRGQHSKTTGRRGRTVGVSK 147
Query: 139 KK 140
KK
Sbjct: 148 KK 149
>gi|444319018|ref|XP_004180166.1| hypothetical protein TBLA_0D01400 [Tetrapisispora blattae CBS 6284]
gi|387513208|emb|CCH60647.1| hypothetical protein TBLA_0D01400 [Tetrapisispora blattae CBS 6284]
Length = 146
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 107/130 (82%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR++N+V KKAD++L KRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIKGVGRRYANLVCKKADVNLQKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKIP WFLNRQKDI DGK L ++SKLR+DLERLKKIRAHRG+RH+WGLRVR
Sbjct: 78 NYKIPAWFLNRQKDINDGKDYHHLANG---VESKLRDDLERLKKIRAHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|385304910|gb|EIF48911.1| 40s ribosomal protein s18 [Dekkera bruxellensis AWRI1499]
Length = 151
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 111/133 (83%), Gaps = 3/133 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TN+DGK K+++ALT I+G GRR++N+ KKAD+DLNKRAGE ++EE+++++ IM +P
Sbjct: 19 MNTNVDGKIKIVYALTTIRGVGRRYANLXCKKADVDLNKRAGELTQEELERVVQIMQDPT 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+YK+P WFLNRQKD+ DGK +L + L+SKLR+D+E+LKK+RAHRG+RH W LRVR
Sbjct: 79 KYKVPAWFLNRQKDLDDGKDYHVLANN---LESKLRDDIEKLKKMRAHRGLRHSWNLRVR 135
Query: 121 GQHTKTTGRRGRT 133
GQHTKTTGRRG+
Sbjct: 136 GQHTKTTGRRGKV 148
>gi|412986247|emb|CCO17447.1| 40S ribosomal protein S18 [Bathycoccus prasinos]
Length = 268
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 109/124 (87%), Gaps = 3/124 (2%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++VM++LT IKG GRRF+NI+ KKA+ID+ KRAGE S E++ ++ I++NPRQ+++PDWF
Sbjct: 145 KQVMYSLTKIKGIGRRFANIICKKAEIDMGKRAGELSAAELESLMVIVSNPRQFRVPDWF 204
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
LNR+KD+ DGKYSQ+ ++ QLD+KLR+D+ERLKK+R HRG+RHYWG++VRGQHTKTTG
Sbjct: 205 LNRKKDVKDGKYSQL---TSNQLDTKLRDDIERLKKMRNHRGLRHYWGIKVRGQHTKTTG 261
Query: 129 RRGR 132
RRG+
Sbjct: 262 RRGK 265
>gi|223994887|ref|XP_002287127.1| RS18, ribosomal protein 18 40S small ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|220976243|gb|EED94570.1| RS18, ribosomal protein 18 40S small ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 146
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKR V+F LT IKG GRRF++++ KKA+ID+NKRAGE + +E++K++ I+ NPR
Sbjct: 18 LNTNVEGKRNVVFGLTKIKGLGRRFADLICKKAEIDVNKRAGELTADEIEKLVAIIQNPR 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD GKYSQ+ D+KLR+D+ER+KKIRAHRG+RH+WG+RVR
Sbjct: 78 QFKIPLWFLNRQKDFKTGKYSQVF---AQNFDAKLRDDIERMKKIRAHRGLRHWWGIRVR 134
Query: 121 GQHTKTTGRR 130
GQHT +TGRR
Sbjct: 135 GQHTCSTGRR 144
>gi|367001196|ref|XP_003685333.1| 40S ribosomal protein S18 [Tetrapisispora phaffii CBS 4417]
gi|357523631|emb|CCE62899.1| hypothetical protein TPHA_0D02620 [Tetrapisispora phaffii CBS 4417]
Length = 146
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR++N+V KKAD+ LNKRAGE ++EE+++++ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTYIKGVGRRYANLVCKKADVSLNKRAGELTQEELERVVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+KIP WFLNRQKD+ DGK L + ++SKLR+DLERLKKIR+HRG+RH+WGLRVR
Sbjct: 78 NFKIPAWFLNRQKDVNDGKDYHNLANN---VESKLRDDLERLKKIRSHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|444708506|gb|ELW49569.1| 40S ribosomal protein S18 [Tupaia chinensis]
Length = 131
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/119 (69%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K FA+TAIKG GRR++++V +KAD+DL K AGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRWKTAFAITAIKGVGRRYAHVVREKADMDLTKTAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>gi|367005747|ref|XP_003687605.1| 40S ribosomal protein S18 [Tetrapisispora phaffii CBS 4417]
gi|357525910|emb|CCE65171.1| hypothetical protein TPHA_0K00370 [Tetrapisispora phaffii CBS 4417]
Length = 146
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 108/130 (83%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR++N+V KKAD+ LNKRAGE ++EE+++++ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTYIKGVGRRYANLVCKKADVSLNKRAGELTQEELERVVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+KIP WFLNRQKD+ DGK L + ++SKLR+DLERLKKIR+HRG+RH+WGLRVR
Sbjct: 78 NFKIPAWFLNRQKDVNDGKDYHNLANN---VESKLRDDLERLKKIRSHRGIRHFWGLRVR 134
Query: 121 GQHTKTTGRR 130
GQHTKTTGRR
Sbjct: 135 GQHTKTTGRR 144
>gi|344248857|gb|EGW04961.1| 40S ribosomal protein S18 [Cricetulus griseus]
Length = 160
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++ +VL+KAD DL KRAGE +E+EV+++ITI NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYALVVLRKADNDLTKRAGELTEDEVERVITITQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHR +RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDMKDGKYSQVLANG---LDNKLREDLERLKKIRAHRELRHFWGLRV 131
>gi|325182081|emb|CCA16534.1| 40S ribosomal protein S18 putative [Albugo laibachii Nc14]
Length = 152
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 111/140 (79%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK ALT+I G GRRF+ ++ KKA++D+ KRAGE S +E+++++ I+ NP
Sbjct: 16 LNTNIDGRRKCWIALTSIAGIGRRFAILICKKAEVDITKRAGELSNDEIERLVAIIQNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNR+KD GK+SQ + + L KLREDLERLKKI HRG+RH WGL+VR
Sbjct: 76 QFKIPVWFLNRKKDYKTGKHSQAVANN---LQGKLREDLERLKKIHTHRGLRHCWGLKVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVG+ +KK
Sbjct: 133 GQHTKTTGRRGRTVGILEKK 152
>gi|403364848|gb|EJY82200.1| Ribosomal protein S18 [Oxytricha trifallax]
Length = 153
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 111/137 (81%), Gaps = 3/137 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN++GKRKVMFAL IKG GRRFSN++LK A IDLNKRAGE +E+E++K+ I+ P
Sbjct: 20 NTNVEGKRKVMFALRVIKGVGRRFSNLILKIAQIDLNKRAGELTEQEIEKVNDILAKPTD 79
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP WFLNRQ+DI DG ++Q++ + LD+KLREDLER+KKIR +RG+RH+ G +VRG
Sbjct: 80 YNIPKWFLNRQRDIRDGNWTQLI---SNALDTKLREDLERMKKIRCNRGLRHFLGHKVRG 136
Query: 122 QHTKTTGRRGRTVGVSK 138
Q TK+TGR GR++GV++
Sbjct: 137 QKTKSTGRTGRSLGVTR 153
>gi|290985905|ref|XP_002675665.1| ribosomal protein S13 [Naegleria gruberi]
gi|284089263|gb|EFC42921.1| ribosomal protein S13 [Naegleria gruberi]
Length = 156
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+TNI+G+R ++ALT++KG GRRF+ IVLKKA+I+L KR+GE SEE+++KI I+ P
Sbjct: 18 FNTNIEGRRSALYALTSVKGIGRRFAGIVLKKAEIELTKRSGELSEEQINKIQDIILAPE 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+YKIP WFLNR++D G ++ + +D LREDLERLKKI++ RG+RH WGLRVR
Sbjct: 78 KYKIPSWFLNRRRDWKSGATEHLVANA---VDMYLREDLERLKKIKSERGLRHMWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRG+TVGVS KK
Sbjct: 135 GQHTKTTGRRGKTVGVSHKK 154
>gi|260942527|ref|XP_002615562.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720]
gi|238850852|gb|EEQ40316.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720]
Length = 117
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 101/118 (85%), Gaps = 3/118 (2%)
Query: 12 MFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNR 71
M+ALT I+G GRR+SN+V KKAD+DLNKRAGE ++EE+++++TIM NP QYKIP WFLNR
Sbjct: 1 MYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIMQNPTQYKIPAWFLNR 60
Query: 72 QKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
QKD VDGK +L + L+SKLR+DLERLKKIRAHRG+RH+WGL+VRGQHTKTT R
Sbjct: 61 QKDHVDGKDYHVLANN---LESKLRDDLERLKKIRAHRGIRHFWGLKVRGQHTKTTSR 115
>gi|294872965|ref|XP_002766467.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
gi|294881108|ref|XP_002769248.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
gi|294951469|ref|XP_002786996.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
gi|294956183|ref|XP_002788842.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
gi|239867347|gb|EEQ99184.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
gi|239872526|gb|EER01966.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
gi|239901586|gb|EER18792.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
gi|239904454|gb|EER20638.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
Length = 149
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 105/130 (80%), Gaps = 3/130 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DG+ KV +ALTAIKG GRRF+ ++ KK ++D NKRAGE ++EE+ KI+ +++NP+Q
Sbjct: 18 NTNVDGRVKVAYALTAIKGIGRRFATLICKKCEVDTNKRAGELTQEEIQKIVQVISNPQQ 77
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
++IP WFLNRQ D VDG YSQ + LD+ REDLER+KK+R HRG+RHYWG+RVRG
Sbjct: 78 FRIPQWFLNRQHDPVDGTYSQ---KYSNLLDASKREDLERMKKMRLHRGLRHYWGIRVRG 134
Query: 122 QHTKTTGRRG 131
QHTKT+GR G
Sbjct: 135 QHTKTSGRGG 144
>gi|444714596|gb|ELW55476.1| 40S ribosomal protein S18 [Tupaia chinensis]
Length = 131
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/119 (68%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG G+R+ +VL+KAD+DL KRAGE +E+EV+ +ITIM N R
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGQRYVYVVLRKADMDLTKRAGELTEDEVEHVITIMQNLR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ +GKYSQ+L T LD+KL EDLERLKKIRAHRG+RH+WGL+V
Sbjct: 76 QYKIPDWFLNRQKDVKNGKYSQVL---TNGLDNKLCEDLERLKKIRAHRGLRHFWGLQV 131
>gi|219128444|ref|XP_002184423.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404224|gb|EEC44172.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 146
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 107/130 (82%), Gaps = 3/130 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKR V+F LT I G GRRFS+++ KKA++D++KRAGE + +E++K++ ++ NPR
Sbjct: 18 LNTNVEGKRNVVFGLTKIPGIGRRFSDLICKKAEVDVDKRAGELTADEIEKVVAVIQNPR 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD GKYSQ+ + A +KLR+D+ERLKKIRAHRG+RH+W +RVR
Sbjct: 78 QFKIPLWFLNRQKDFKTGKYSQVFAQNIA---AKLRDDIERLKKIRAHRGLRHWWNIRVR 134
Query: 121 GQHTKTTGRR 130
GQHT +TGRR
Sbjct: 135 GQHTCSTGRR 144
>gi|403302924|ref|XP_003942098.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403302926|ref|XP_003942099.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 133
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 100/121 (82%), Gaps = 3/121 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK FA+TAIKG GRR++++VL KAD DL KRAGE +E+EV+ +ITIM NPR
Sbjct: 16 LNTNIDGRRKTAFAVTAIKGVGRRYAHVVLGKADTDLTKRAGELTEDEVEHVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ KIPDWFLNRQKD DGKYSQ+L LD+KL EDLERLKKIRAHRG+ H+WGL VR
Sbjct: 76 RCKIPDWFLNRQKDAKDGKYSQVLANG---LDNKLHEDLERLKKIRAHRGLHHFWGLCVR 132
Query: 121 G 121
G
Sbjct: 133 G 133
>gi|392350692|ref|XP_003750728.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S18-like
[Rattus norvegicus]
Length = 228
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 108/141 (76%), Gaps = 23/141 (16%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KAD+DLN+RAGE
Sbjct: 110 LNTNIDGQRKIAFAITAIKGVGRRYAHVVLRKADLDLNERAGE----------------- 152
Query: 61 QYKIPDW-FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+IPD FLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIR HRG+RH+WGLRV
Sbjct: 153 --QIPDXPFLNRQKDVKDGKYSQVLDNG---LDNKLREDLERLKKIRTHRGLRHFWGLRV 207
Query: 120 RGQHTKTTGRRGRTVGVSKKK 140
RGQHTK TGRRGRTVGVSK K
Sbjct: 208 RGQHTKITGRRGRTVGVSKTK 228
>gi|344298867|ref|XP_003421112.1| PREDICTED: 40S ribosomal protein S18-like [Loxodonta africana]
Length = 222
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 106/140 (75%), Gaps = 10/140 (7%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 93 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 152
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QYKIPDWFLNRQKD+ DGKYSQ+ +D + + G LRVR
Sbjct: 153 QYKIPDWFLNRQKDVKDGKYSQVC------IDEGSGGVGKVGVQGDVPLGC----SLRVR 202
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGRRGRTVGVSKKK
Sbjct: 203 GQHTKTTGRRGRTVGVSKKK 222
>gi|392342384|ref|XP_003754570.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S18-like
[Rattus norvegicus]
Length = 168
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 108/141 (76%), Gaps = 23/141 (16%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KAD+DLN+RAGE
Sbjct: 50 LNTNIDGQRKIAFAITAIKGVGRRYAHVVLRKADLDLNERAGE----------------- 92
Query: 61 QYKIPDW-FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+IPD FLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIR HRG+RH+WGLRV
Sbjct: 93 --QIPDXPFLNRQKDVKDGKYSQVLDNG---LDNKLREDLERLKKIRTHRGLRHFWGLRV 147
Query: 120 RGQHTKTTGRRGRTVGVSKKK 140
RGQHTK TGRRGRTVGVSK K
Sbjct: 148 RGQHTKITGRRGRTVGVSKTK 168
>gi|146103218|ref|XP_001469510.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5]
gi|398024110|ref|XP_003865216.1| 40S ribosomal protein S18, putative [Leishmania donovani]
gi|398024112|ref|XP_003865217.1| 40S ribosomal protein S18, putative, partial [Leishmania donovani]
gi|134073880|emb|CAM72619.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5]
gi|322503453|emb|CBZ38538.1| 40S ribosomal protein S18, putative [Leishmania donovani]
gi|322503454|emb|CBZ38539.1| 40S ribosomal protein S18, putative, partial [Leishmania donovani]
Length = 166
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/140 (59%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA ID+ +RAG + EE++KI I+ +P
Sbjct: 30 LNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEIIADPA 89
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIPDWFLNRQ+D GK + S++ +D++LREDLERLKKIRAHRG+RH +GLRVR
Sbjct: 90 KFKIPDWFLNRQRDPKTGKTEHL---SSSMVDTRLREDLERLKKIRAHRGVRHAYGLRVR 146
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT TTGR G+TVGVS+ K
Sbjct: 147 GQHTCTTGRHGKTVGVSRGK 166
>gi|146103213|ref|XP_001469509.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5]
gi|134073879|emb|CAM72618.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5]
Length = 153
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/140 (59%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA ID+ +RAG + EE++KI I+ +P
Sbjct: 17 LNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEIIADPA 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIPDWFLNRQ+D GK + S++ +D++LREDLERLKKIRAHRG+RH +GLRVR
Sbjct: 77 KFKIPDWFLNRQRDPKTGKTEHL---SSSMVDTRLREDLERLKKIRAHRGVRHAYGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT TTGR G+TVGVS+ K
Sbjct: 134 GQHTCTTGRHGKTVGVSRGK 153
>gi|156086130|ref|XP_001610474.1| 40S ribosomal protein S18 [Babesia bovis T2Bo]
gi|154797727|gb|EDO06906.1| 40S ribosomal protein S18, putative [Babesia bovis]
Length = 154
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 108/140 (77%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG++KV ALTAI+G GRR + +V K A ID+ KRAGE + +E++K++TI+++P
Sbjct: 18 LNTNVDGRQKVTVALTAIRGIGRRMATVVCKVAGIDVTKRAGELTTDEINKVVTIISSPA 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
IP WFLNRQKD +GK L + LD+ LR+DLER+KK+R HRG+RHYWGLR R
Sbjct: 78 DVMIPAWFLNRQKDYKEGKN---LHNTANMLDTCLRDDLERMKKMRLHRGLRHYWGLRTR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTK+TGR G+TVGV KKK
Sbjct: 135 GQHTKSTGRHGKTVGVVKKK 154
>gi|339238799|ref|XP_003380954.1| 40S ribosomal protein S18 [Trichinella spiralis]
gi|316976096|gb|EFV59439.1| 40S ribosomal protein S18 [Trichinella spiralis]
Length = 207
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/116 (70%), Positives = 97/116 (83%), Gaps = 3/116 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG KV +ALTAIKG GRRFS+ V +KADI ++KRAGE + EE DK+I +MTNP+
Sbjct: 68 MNTNIDGNAKVPYALTAIKGVGRRFSHAVCRKADISIHKRAGELTAEETDKLINVMTNPK 127
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWG 116
QYKIPDWFLNR++DI DG +Q+L T LDSKLREDLERLKKIRAHRG+RHYWG
Sbjct: 128 QYKIPDWFLNRRRDIKDGTTTQVLSTI---LDSKLREDLERLKKIRAHRGLRHYWG 180
>gi|5441533|emb|CAB46821.1| Ribosomal protein [Canis lupus familiaris]
Length = 97
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 91/100 (91%), Gaps = 3/100 (3%)
Query: 41 AGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLE 100
AGE +E+EV+++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLE
Sbjct: 1 AGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLE 57
Query: 101 RLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
RLKKIRAHRG+RH+WGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 58 RLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 97
>gi|444708073|gb|ELW49192.1| E3 ubiquitin-protein ligase MARCH4 [Tupaia chinensis]
Length = 381
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 98/121 (80%), Gaps = 6/121 (4%)
Query: 20 GCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGK 79
GCG + + V +KAD+DL KRAGE EEEV+++I +M +PRQYKIPDWFLNRQK+I DGK
Sbjct: 267 GCGAKIRSCVSRKADMDLTKRAGELPEEEVERVIAVMQSPRQYKIPDWFLNRQKEIKDGK 326
Query: 80 YSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKK 139
YSQ+L S LD+KLREDLE KI AHRG+RH+W L V+GQHTKTTGRRG TVGVSKK
Sbjct: 327 YSQVLANS---LDNKLREDLE---KILAHRGLRHFWSLLVQGQHTKTTGRRGCTVGVSKK 380
Query: 140 K 140
K
Sbjct: 381 K 381
>gi|164658281|ref|XP_001730266.1| hypothetical protein MGL_2648 [Malassezia globosa CBS 7966]
gi|159104161|gb|EDP43052.1| hypothetical protein MGL_2648 [Malassezia globosa CBS 7966]
Length = 154
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 115/139 (82%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGKRK+ +ALT IKG GRR++NIV KKADIDL KRAGE + +E+++I+ I+ +P+
Sbjct: 19 LNTNVDGKRKIQYALTEIKGVGRRYANIVCKKADIDLTKRAGELNSDELERIVNILQSPQ 78
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIP WFLNRQKD GK +Q+L + +++KLR+DLERLKKIRAHRG+RHYW LR R
Sbjct: 79 EFKIPTWFLNRQKDFTTGKDAQVL---SNNVEAKLRDDLERLKKIRAHRGLRHYWELRAR 135
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHT+TTGRRGRTV KK
Sbjct: 136 GQHTRTTGRRGRTVANKKK 154
>gi|342184204|emb|CCC93685.1| putative 40S ribosomal protein S18 [Trypanosoma congolense IL3000]
Length = 183
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 111/140 (79%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA +D+ +RAG S +E++KI I+ +P
Sbjct: 47 LNTNVEGKRKVPFALRMVKGIGIRFAYMVCKKAGVDVERRAGTLSADELEKISDIIADPA 106
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+YKIP+WFLNRQ+D GK + ++A +D++LREDLERL+KIRAHRG+RH +GLRVR
Sbjct: 107 KYKIPEWFLNRQRDPKTGKTEHL---TSAMVDTRLREDLERLRKIRAHRGVRHAYGLRVR 163
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT T+GRRG+TVGVS+ K
Sbjct: 164 GQHTCTSGRRGKTVGVSRTK 183
>gi|342184205|emb|CCC93686.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 153
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 111/140 (79%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA +D+ +RAG S +E++KI I+ +P
Sbjct: 17 LNTNVEGKRKVPFALRMVKGIGIRFAYMVCKKAGVDVERRAGTLSADELEKISDIIADPA 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+YKIP+WFLNRQ+D GK + ++A +D++LREDLERL+KIRAHRG+RH +GLRVR
Sbjct: 77 KYKIPEWFLNRQRDPKTGKTEHL---TSAMVDTRLREDLERLRKIRAHRGVRHAYGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT T+GRRG+TVGVS+ K
Sbjct: 134 GQHTCTSGRRGKTVGVSRTK 153
>gi|71747446|ref|XP_822778.1| 40S ribosomal protein S18 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|71747448|ref|XP_822779.1| 40S ribosomal protein S18 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802214|pdb|3ZEY|M Chain M, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70832446|gb|EAN77950.1| 40S ribosomal protein S18, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|70832447|gb|EAN77951.1| 40S ribosomal protein S18, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332570|emb|CBH15565.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense
DAL972]
gi|261332571|emb|CBH15566.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense
DAL972]
Length = 153
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 111/140 (79%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA +D+ +RAG S EE++KI ++ +P
Sbjct: 17 LNTNVEGKRKVPFALRMVKGIGIRFAYMVCKKAGVDVERRAGTLSPEELEKISEVIADPA 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIP+WFLNRQ+D GK + +++ +D++LREDLERL+KIRAHRG+RH +GLRVR
Sbjct: 77 KFKIPEWFLNRQRDPKTGKTEHL---TSSMVDTRLREDLERLRKIRAHRGVRHAYGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT T+GRRG+TVGVS+ K
Sbjct: 134 GQHTCTSGRRGKTVGVSRTK 153
>gi|157876640|ref|XP_001686665.1| putative 40S ribosomal protein S18 [Leishmania major strain
Friedlin]
gi|66476122|gb|AAY51369.1| ribosomal protein S18 [Leishmania major]
gi|68129740|emb|CAJ09046.1| putative 40S ribosomal protein S18 [Leishmania major strain
Friedlin]
Length = 218
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA ID+ +RAG + EE++KI I+ +P
Sbjct: 82 LNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEIIADPA 141
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIPDWFLNRQ+D GK + S++ +D++LR+DLERLKK+RAHRG+RH +GLRVR
Sbjct: 142 KFKIPDWFLNRQRDPKTGKTEHL---SSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRVR 198
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT T+GR G+TVGVS+ K
Sbjct: 199 GQHTCTSGRHGKTVGVSRGK 218
>gi|401882257|gb|EJT46523.1| ribosomal protein S18 [Trichosporon asahii var. asahii CBS 2479]
Length = 192
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 115/177 (64%), Gaps = 40/177 (22%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVL------------------------------ 30
++TN+ G K M+ALT I+G GRR++N+V
Sbjct: 19 LNTNVKGTGKAMYALTEIRGVGRRYANLVWWNGEDMKRTTELREYDVGRLDVDIVMRWID 78
Query: 31 -----KKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILL 85
KKADID++KRAGE + +E+++I+TIM NP Q+KIP WFLNRQ+D+ DGK S +L
Sbjct: 79 ARIFCKKADIDMSKRAGELNSDELERIVTIMQNPTQFKIPTWFLNRQRDLTDGKDSHVL- 137
Query: 86 TSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRR--GRTVGVSKKK 140
+ Q+D KLR+DLERLKKIR+HRG+RH+WGLRVRGQHTKTTGRR RT+ KK
Sbjct: 138 --SNQIDQKLRDDLERLKKIRSHRGLRHHWGLRVRGQHTKTTGRRVGARTIATKGKK 192
>gi|401419898|ref|XP_003874438.1| putative 40S ribosomal protein S18 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401419900|ref|XP_003874439.1| putative 40S ribosomal protein S18 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490674|emb|CBZ25936.1| putative 40S ribosomal protein S18 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490675|emb|CBZ25937.1| putative 40S ribosomal protein S18 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 153
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA ID+ +RAG + EE++KI I+ +P
Sbjct: 17 LNTNVEGKRKVAFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEIIADPA 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIPDWFLNRQ+D GK + S++ +D++LR+DLERLKK+RAHRG+RH +GLRVR
Sbjct: 77 KFKIPDWFLNRQRDPKTGKTEHL---SSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT T+GR G+TVGVS+ K
Sbjct: 134 GQHTCTSGRHGKTVGVSRGK 153
>gi|340057144|emb|CCC51486.1| putative 40S ribosomal protein S18 [Trypanosoma vivax Y486]
Length = 153
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA +D+ +RAG + EE++KI I+ +P
Sbjct: 17 LNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGVDVERRAGTLTVEELEKISDIIADPA 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIPDWFLNRQ+D GK + ++A +D++LREDLERL+KIRAHRG+RH +GLRVR
Sbjct: 77 KFKIPDWFLNRQRDPKTGKTEHL---TSAMVDTRLREDLERLRKIRAHRGVRHAYGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT T+GR G+TVGVS+ K
Sbjct: 134 GQHTCTSGRHGKTVGVSRTK 153
>gi|157876642|ref|XP_001686666.1| putative 40S ribosomal protein S18 [Leishmania major strain
Friedlin]
gi|68129741|emb|CAJ09047.1| putative 40S ribosomal protein S18 [Leishmania major strain
Friedlin]
Length = 153
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA ID+ +RAG + EE++KI I+ +P
Sbjct: 17 LNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEIIADPA 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIPDWFLNRQ+D GK + S++ +D++LR+DLERLKK+RAHRG+RH +GLRVR
Sbjct: 77 KFKIPDWFLNRQRDPKTGKTEHL---SSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT T+GR G+TVGVS+ K
Sbjct: 134 GQHTCTSGRHGKTVGVSRGK 153
>gi|344239817|gb|EGV95920.1| 40S ribosomal protein S18 [Cricetulus griseus]
Length = 113
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/114 (73%), Positives = 99/114 (86%), Gaps = 4/114 (3%)
Query: 27 NIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLT 86
N+VL+KADIDL KRAGE +E+EV+++ITIM NPRQYKIPDWFLN+QKD+ DGKYSQ+L
Sbjct: 4 NMVLRKADIDLIKRAGELTEDEVERVITIMQNPRQYKIPDWFLNKQKDMKDGKYSQVLAN 63
Query: 87 STAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
LD+KLREDLERL KIRAHRG+ H+ GLRVRGQH+KTTGR+G TV VSKKK
Sbjct: 64 G---LDNKLREDLERL-KIRAHRGLHHFGGLRVRGQHSKTTGRQGCTVDVSKKK 113
>gi|71725687|gb|AAZ38989.1| 40S ribosomal protein S18, partial [Oxyuranus scutellatus]
Length = 95
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 89/98 (90%), Gaps = 3/98 (3%)
Query: 43 ECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERL 102
E +E+EV+++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERL
Sbjct: 1 ELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERL 57
Query: 103 KKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
KKIRAHRG+RH+WGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 58 KKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 95
>gi|379994259|gb|AFD22756.1| 40S ribosomal protein S18, partial [Collodictyon triciliatum]
Length = 128
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 96/116 (82%), Gaps = 3/116 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GK K+MFALT+I+G GRRFSN+V KKA++D NKRAGE S EE++K++ I+ NP
Sbjct: 16 LNTNVEGKEKIMFALTSIRGIGRRFSNLVCKKAEVDTNKRAGELSNEEIEKLVAIIQNPE 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWG 116
YKIP WFLNR KDI DG + Q++ S LD+KLREDLERLKKIRAHRG+RH+WG
Sbjct: 76 AYKIPRWFLNRSKDIRDGSFGQLVSNS---LDNKLREDLERLKKIRAHRGLRHHWG 128
>gi|390478726|ref|XP_003735566.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S18-like
[Callithrix jacchus]
Length = 153
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 103/140 (73%), Gaps = 2/140 (1%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN G++K F +TA+ G RR++ +VL+KAD+DL++ AGE +E+ VD+ IT+ NP
Sbjct: 16 LNTNTSGRQKTAFTITAVXGVDRRYTRVVLRKADVDLSRXAGELTEDTVDRAITVTQNPH 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
KIPDWFLNR KD D KYSQ+L ++ L +K REDLE KKI HRG+RH+WG+R R
Sbjct: 76 PSKIPDWFLNRXKDGKDAKYSQVL--ASCXLANKHREDLEXPKKIWGHRGLRHFWGIRDR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTG G T+ VSKKK
Sbjct: 134 GQHTKTTGHHGHTMRVSKKK 153
>gi|4139068|gb|AAD03679.1| ribosomal protein S18 [Cricetulus sp.]
Length = 95
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 89/98 (90%), Gaps = 3/98 (3%)
Query: 43 ECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERL 102
+ +E+EV+++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERL
Sbjct: 1 KLNEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERL 57
Query: 103 KKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
KKIRAHRG+RH+WGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 58 KKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 95
>gi|154345580|ref|XP_001568727.1| putative 40S ribosomal protein S18 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|154345582|ref|XP_001568728.1| putative 40S ribosomal protein S18 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066069|emb|CAM43857.1| putative 40S ribosomal protein S18 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066070|emb|CAM43858.1| putative 40S ribosomal protein S18 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 153
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 109/140 (77%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KK ID+ +RAG + EE++K+ ++ +P
Sbjct: 17 LNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKTGIDVERRAGTLTAEELEKVAEVIVDPA 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIPDWFLNRQ+D GK + S++ +D++LR+DLERLKK+RAHRG+RH +GLRVR
Sbjct: 77 RFKIPDWFLNRQRDPKTGKTEHL---SSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT T+GR G+TVGVS+ K
Sbjct: 134 GQHTCTSGRHGKTVGVSRGK 153
>gi|406701403|gb|EKD04549.1| ribosomal protein S18 [Trichosporon asahii var. asahii CBS 8904]
Length = 204
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 115/189 (60%), Gaps = 52/189 (27%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIV------------------------------- 29
++TN+ G K M+ALT I+G GRR++N+V
Sbjct: 19 LNTNVKGTGKAMYALTEIRGVGRRYANLVGWDEEDMKRTTESREYDVGRLDVDIVVRWID 78
Query: 30 ----------------LKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQK 73
KKADID++KRAGE + +E+++I+TIM NP Q+KIP WFLNRQ+
Sbjct: 79 ARISVWEDQVGLSRAFCKKADIDMSKRAGELNSDELERIVTIMQNPTQFKIPTWFLNRQR 138
Query: 74 DIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRR--G 131
D+ DGK S +L + Q+D KLR+DLERLKKIR+HRG+RH+WGLRVRGQHTKTTGRR
Sbjct: 139 DLTDGKDSHVL---SNQIDQKLRDDLERLKKIRSHRGLRHHWGLRVRGQHTKTTGRRVGA 195
Query: 132 RTVGVSKKK 140
RT+ KK
Sbjct: 196 RTIATKGKK 204
>gi|442762181|gb|JAA73249.1| Putative ptz00134 40s ribosomal protein s18, partial [Ixodes
ricinus]
Length = 131
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 101/134 (75%), Gaps = 3/134 (2%)
Query: 7 GKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPD 66
G+ KV ALTAI+G GRR + +V K A ID+ KRAGE + +E++K+ITI+++P IP
Sbjct: 1 GREKVTVALTAIRGIGRRMATVVCKVAGIDVTKRAGELTNDEINKVITIISSPADVMIPA 60
Query: 67 WFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKT 126
WFLNRQKD +GK L + LD+ LREDLER+KK+R HRG+RHYWGLR RGQHTKT
Sbjct: 61 WFLNRQKDYKEGKN---LHNTANMLDTCLREDLERMKKMRLHRGLRHYWGLRTRGQHTKT 117
Query: 127 TGRRGRTVGVSKKK 140
TGR GRT GV+KKK
Sbjct: 118 TGRHGRTGGVAKKK 131
>gi|344246113|gb|EGW02217.1| Gephyrin [Cricetulus griseus]
Length = 389
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 98/119 (82%), Gaps = 3/119 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG +K+ FA+ A+KG G+R S++VL+KA+ DL KRAGE E+EV+++ITIM NP+
Sbjct: 274 LNTNIDGWQKIAFAIAAMKGVGQRCSHVVLRKANTDLTKRAGELMEDEVERMITIMQNPQ 333
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KL EDLE+LKKIRAHRG+ H WGL V
Sbjct: 334 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLCEDLEQLKKIRAHRGLCHLWGLCV 389
>gi|71666149|ref|XP_820037.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener]
gi|71666187|ref|XP_820056.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener]
gi|70885364|gb|EAN98186.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi]
gi|70885383|gb|EAN98205.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi]
Length = 153
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 108/140 (77%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN++GKRKV FAL +KG G RF+ +V KKA ID+ +RAG + EE+++I ++ +P
Sbjct: 17 LNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGIDVERRAGTLTAEELERISEVIADPA 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++KIPDWFLNRQ+D GK + ++A +D++LREDLERL+K R HRG+RH +GLRVR
Sbjct: 77 KFKIPDWFLNRQRDPKTGKTEHL---TSAMVDTRLREDLERLRKNRVHRGVRHAYGLRVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHT T+GR G+TVGVS+ K
Sbjct: 134 GQHTCTSGRHGKTVGVSRTK 153
>gi|83001915|ref|XP_899585.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Mus musculus]
gi|83002589|ref|XP_909720.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Mus musculus]
Length = 141
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 106/140 (75%), Gaps = 14/140 (10%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++T+IDG+ K+ A+ IKG GR ++++VL+K DI GE +E+ V+ +ITIM NPR
Sbjct: 16 LNTDIDGRWKIATAI--IKGVGRSYAHVVLRKTDI------GELTEDGVEHLITIMQNPR 67
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QY+IPDWFLNRQKD GKYSQ+L+ LD+KLRED ERLKKIRAH G+ H WGLR+
Sbjct: 68 QYRIPDWFLNRQKD---GKYSQVLVNG---LDNKLREDPERLKKIRAHSGLLHLWGLRIH 121
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTG GRTVGV KKK
Sbjct: 122 GQHTKTTGHGGRTVGVFKKK 141
>gi|145539402|ref|XP_001455391.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423199|emb|CAK87994.1| unnamed protein product [Paramecium tetraurelia]
Length = 155
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 109/140 (77%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+++ + + +IKG GRRF+ + K +DL+KRAGE +++E KI ++ +P
Sbjct: 18 LNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLSKRAGELTDDEAHKITEVIKSPE 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Y IP WFLNRQ+D DGK Q+ +T +L++KLREDLER+KKI+ +RG+RH+WGLRVR
Sbjct: 78 AYNIPRWFLNRQRDFKDGKNYQV---TTNELETKLREDLERMKKIKCNRGLRHHWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G+T+GV +KK
Sbjct: 135 GQHTKTTGRGGQTLGVERKK 154
>gi|407725124|dbj|BAM45595.1| putative RpS18 protein, partial [Andricus pseudoflos]
gi|407725126|dbj|BAM45596.1| putative RpS18 protein, partial [Andricus pseudoflos]
gi|407725128|dbj|BAM45597.1| putative RpS18 protein, partial [Andricus pseudoflos]
gi|407725130|dbj|BAM45598.1| putative RpS18 protein, partial [Andricus kashiwaphilus]
gi|407725132|dbj|BAM45599.1| putative RpS18 protein, partial [Andricus kashiwaphilus]
gi|407725134|dbj|BAM45600.1| putative RpS18 protein, partial [Andricus kashiwaphilus]
gi|407725136|dbj|BAM45601.1| putative RpS18 protein, partial [Andricus kashiwaphilus]
gi|407725138|dbj|BAM45602.1| putative RpS18 protein, partial [Andricus kashiwaphilus]
gi|407725140|dbj|BAM45603.1| putative RpS18 protein, partial [Andricus kashiwaphilus]
gi|407725142|dbj|BAM45604.1| putative RpS18 protein, partial [Andricus mukaigawae]
gi|407725144|dbj|BAM45605.1| putative RpS18 protein, partial [Andricus mukaigawae]
gi|407725146|dbj|BAM45606.1| putative RpS18 protein, partial [Andricus mukaigawae]
gi|407725148|dbj|BAM45607.1| putative RpS18 protein, partial [Andricus mukaigawae]
Length = 91
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/94 (81%), Positives = 88/94 (93%), Gaps = 3/94 (3%)
Query: 18 IKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVD 77
IKG GRR++NIVLKKADIDL+KRAGECSEEEV+KI+TIM NPRQYKIPDWFLNRQKDIVD
Sbjct: 1 IKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPRQYKIPDWFLNRQKDIVD 60
Query: 78 GKYSQILLTSTAQLDSKLREDLERLKKIRAHRGM 111
GKYSQ+ +++ LDSKLREDLER+KKIRAHRG+
Sbjct: 61 GKYSQL---TSSNLDSKLREDLERMKKIRAHRGL 91
>gi|145479337|ref|XP_001425691.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145534229|ref|XP_001452859.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392763|emb|CAK58293.1| unnamed protein product [Paramecium tetraurelia]
gi|124420558|emb|CAK85462.1| unnamed protein product [Paramecium tetraurelia]
Length = 155
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 108/140 (77%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+++ + + +IKG GRRF+ + K +DL KRAGE +++E KI ++ +P
Sbjct: 18 LNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVIKSPE 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Y IP WFLNRQ+D DGK Q+ +T +L++KLREDLER+KKI+ +RG+RH+WGLRVR
Sbjct: 78 AYNIPRWFLNRQRDFKDGKNYQV---TTNELETKLREDLERMKKIKCNRGLRHHWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G+T+GV +KK
Sbjct: 135 GQHTKTTGRGGQTLGVERKK 154
>gi|145483041|ref|XP_001427543.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394625|emb|CAK60145.1| unnamed protein product [Paramecium tetraurelia]
Length = 155
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 108/140 (77%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+++ + + +IKG GRRF+ + K +DL KRAGE +++E KI ++ +P
Sbjct: 18 LNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVIKSPE 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Y IP WFLNRQ+D DGK Q+ +T +L++KLREDLER+KKI+ +RG+RH+WGLRVR
Sbjct: 78 AYNIPRWFLNRQRDFKDGKNYQV---TTNELETKLREDLERMKKIKCNRGLRHHWGLRVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G+T+GV +KK
Sbjct: 135 GQHTKTTGRGGQTLGVERKK 154
>gi|348688207|gb|EGZ28021.1| hypothetical protein PHYSODRAFT_353469 [Phytophthora sojae]
Length = 152
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/136 (62%), Positives = 110/136 (80%), Gaps = 3/136 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKV ALTAI+G GRRFS +V KKA++D+ KRAGE + +E+++++ I+ NP
Sbjct: 16 LNTNIDGRRKVWVALTAIQGVGRRFSIMVCKKAEVDITKRAGELTNDEIERVVAIIQNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q+KIP WFLNRQKD GK+SQ++ + L K RED ERLKKI AHRG+RH+WGL+VR
Sbjct: 76 QFKIPVWFLNRQKDFKTGKHSQVVANN---LQGKWREDYERLKKIYAHRGLRHWWGLKVR 132
Query: 121 GQHTKTTGRRGRTVGV 136
GQHTKTTGRRG TVG+
Sbjct: 133 GQHTKTTGRRGTTVGI 148
>gi|340507221|gb|EGR33219.1| hypothetical protein IMG5_058950 [Ichthyophthirius multifiliis]
Length = 154
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 105/140 (75%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGKR+ ALT I+G GRRF++++ K ID N RAG +E++ +KI ++++P
Sbjct: 18 LNTNIDGKRRTPIALTGIRGIGRRFAHLICKVLKIDPNSRAGTLTEDQCNKITQVISDPE 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ IP W LNR D DGK Q+ ++ LD+K+REDLERLKKI++HRG+RH+WGL+VR
Sbjct: 78 SFGIPLWLLNRINDFKDGKNYQL---ASNTLDTKIREDLERLKKIKSHRGLRHFWGLKVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G T+GV +KK
Sbjct: 135 GQHTKTTGRHGVTIGVVRKK 154
>gi|326485535|gb|EGE09545.1| 30S ribosomal protein S13p/S18e [Trichophyton equinum CBS 127.97]
Length = 103
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 88/100 (88%), Gaps = 3/100 (3%)
Query: 41 AGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLE 100
AGE S EE+++I+TI+ NP QYKIP WFLNRQ+DI DGK +Q+L Q+DSKLREDLE
Sbjct: 6 AGEISSEELERIVTIIQNPTQYKIPTWFLNRQRDITDGKDTQVLAN---QMDSKLREDLE 62
Query: 101 RLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
RLKKIRAHRG+RHYWGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 63 RLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 102
>gi|326516128|dbj|BAJ88087.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 86/92 (93%), Gaps = 3/92 (3%)
Query: 49 VDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAH 108
+ KIITIM NPRQYKIPDWFLNRQKD+VDGK+SQ+ +++ LDSKLREDLERLKKI+AH
Sbjct: 12 LKKIITIMQNPRQYKIPDWFLNRQKDVVDGKFSQL---TSSTLDSKLREDLERLKKIKAH 68
Query: 109 RGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
RG+RHYWGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 69 RGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 100
>gi|340504559|gb|EGR30992.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 154
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 105/140 (75%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGKR+ ALT I+G GRRF++++ K ID N RAG +E++ ++I ++++P
Sbjct: 18 LNTNIDGKRRTPIALTGIRGIGRRFAHLICKVLKIDPNSRAGTLTEDQCNRITQVISDPE 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ IP W LNR D DGK Q+ ++ LD+K+REDLERLKKI++HRG+RH+WGL+VR
Sbjct: 78 SFGIPLWLLNRINDFKDGKNYQL---ASNTLDTKIREDLERLKKIKSHRGLRHFWGLKVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G T+GV +KK
Sbjct: 135 GQHTKTTGRHGVTIGVVRKK 154
>gi|428162704|gb|EKX31822.1| small subunit ribosomal protein S18e_2, cytoplasmic type
[Guillardia theta CCMP2712]
Length = 223
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 102/140 (72%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+TNIDG R V++ALT IKG GRRF + V+K+A I ++ AGE + EEV+KI+ ++ NP+
Sbjct: 87 FNTNIDGTRNVLYALTMIKGIGRRFGDAVIKRAGIAHSRLAGELTAEEVEKIVQVVENPK 146
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Y IP W LNR+KD K L + +LD +LREDL+RL+K+R HRG+RH WG +VR
Sbjct: 147 LYDIPSWMLNRRKDY---KTGLDLHNTVNKLDFQLREDLDRLRKMRVHRGLRHAWGWKVR 203
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR GR VGV KKK
Sbjct: 204 GQHTKTTGRGGRCVGVLKKK 223
>gi|385881430|gb|AFI98436.1| ribosomal protein S18, partial [Antricola delacruzi]
Length = 88
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 85/90 (94%), Gaps = 3/90 (3%)
Query: 51 KIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRG 110
++ITIM+NPRQYKIPDWFLNRQKDI DGKYSQ+ TS A L++KLREDLERLKKIRAHRG
Sbjct: 1 ELITIMSNPRQYKIPDWFLNRQKDIKDGKYSQV--TSNA-LENKLREDLERLKKIRAHRG 57
Query: 111 MRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
+RH+WGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 58 LRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 87
>gi|310769817|gb|ADP21466.1| ribosomal protein S18 [Antheraea yamamai]
Length = 82
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 80/85 (94%), Gaps = 3/85 (3%)
Query: 56 MTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYW 115
M+NPRQYKIP WFLNRQKDIVDGKYSQ+ +++ LDSKLREDLERLKKIRAHRGMRHYW
Sbjct: 1 MSNPRQYKIPHWFLNRQKDIVDGKYSQL---TSSNLDSKLREDLERLKKIRAHRGMRHYW 57
Query: 116 GLRVRGQHTKTTGRRGRTVGVSKKK 140
GLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 58 GLRVRGQHTKTTGRRGRTVGVSKKK 82
>gi|148683548|gb|EDL15495.1| mCG4355 [Mus musculus]
Length = 142
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/118 (64%), Positives = 94/118 (79%), Gaps = 4/118 (3%)
Query: 7 GKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPD 66
G ++ FA+TAIKG GR ++ +VL KADIDL KRAGE +E+EV+++ITIM NPRQYKIPD
Sbjct: 2 GGGEIAFAITAIKGVGRSYAPVVLGKADIDLTKRAGEPTEDEVERVITIMQNPRQYKIPD 61
Query: 67 WFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWG-LRVRGQH 123
WFL RQKD+ DGK SQ+L LD+KLR+DLERLKKIRAHRG+R++WG L R H
Sbjct: 62 WFLTRQKDVKDGKCSQVLANG---LDNKLRDDLERLKKIRAHRGLRYFWGPLCPRSAH 116
>gi|388509386|gb|AFK42759.1| unknown [Lotus japonicus]
Length = 178
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/104 (67%), Positives = 93/104 (89%), Gaps = 3/104 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKV +ALTAIKG GRRF+++V++KAD+D +KRAGE +EEEVD+++TI+ NPR
Sbjct: 18 LNTNIDGRRKVGYALTAIKGVGRRFAHVVIRKADVDASKRAGELTEEEVDRVVTIIANPR 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKK 104
QYKIPDWFLNRQKDI DGK+SQ+ ++ LD+K+REDLER+KK
Sbjct: 78 QYKIPDWFLNRQKDIKDGKFSQV---TSNNLDTKVREDLERMKK 118
>gi|357484775|ref|XP_003612675.1| Ribosomal protein S18 [Medicago truncatula]
gi|355514010|gb|AES95633.1| Ribosomal protein S18 [Medicago truncatula]
Length = 112
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 88/114 (77%), Gaps = 3/114 (2%)
Query: 15 LTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKD 74
A RF+NI KKAD+D+N RAG+ S E+D I+T++ NPRQ+K+P WFLNR+KD
Sbjct: 2 FPAFGNLFMRFANICCKKADVDMNMRAGKLSAAELDNIMTVVANPRQFKVPYWFLNRKKD 61
Query: 75 IVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
DGK+SQ++ + QLD KLR+DLERLKKIR HRG+RHYWGLRVRGQHT TTG
Sbjct: 62 YKDGKFSQVV---SNQLDRKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTTTTG 112
>gi|357484779|ref|XP_003612677.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|355514012|gb|AES95635.1| 40S ribosomal protein S18 [Medicago truncatula]
Length = 113
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 87/106 (82%), Gaps = 3/106 (2%)
Query: 23 RRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQ 82
RRF+NI KKAD+D+N RAG+ S E+D I+T++ NPRQ+K+PDWFLNR+KD DGK+SQ
Sbjct: 11 RRFANICCKKADVDMNMRAGKLSAAELDNIMTVVANPRQFKVPDWFLNRKKDYKDGKFSQ 70
Query: 83 ILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
++ + QLD K R+DLERLKKIR HRG+RH WGLRVRGQHT TTG
Sbjct: 71 VV---SNQLDMKFRDDLERLKKIRNHRGLRHNWGLRVRGQHTTTTG 113
>gi|357484769|ref|XP_003612672.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|355514007|gb|AES95630.1| 40S ribosomal protein S18 [Medicago truncatula]
Length = 264
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/118 (61%), Positives = 90/118 (76%), Gaps = 3/118 (2%)
Query: 20 GCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGK 79
C RF+NI KKAD+D+N RAG+ S E+D I+T++ NPRQ+K+P WFLNR+KD DGK
Sbjct: 45 SCFWRFANICCKKADVDMNMRAGKLSAAELDNIMTVVANPRQFKVPYWFLNRKKDYKDGK 104
Query: 80 YSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVS 137
+SQ++ + QLD KLR+DLERLKKIR HRG+RHYWGL VRGQHT TT R V VS
Sbjct: 105 FSQVV---SNQLDMKLRDDLERLKKIRNHRGLRHYWGLCVRGQHTTTTEERKIRVDVS 159
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 87/109 (79%), Gaps = 3/109 (2%)
Query: 20 GCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGK 79
C RF+NI KKAD+D+N RAG+ S E+D I+T++ NPRQ+K+P WFLNR+KD DGK
Sbjct: 159 SCFWRFANICCKKADVDMNMRAGKLSAAELDNIMTVVANPRQFKVPYWFLNRKKDYKDGK 218
Query: 80 YSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+SQ++ + QLD KLR+DLERLKKIR HRG+RHYWGL VRGQHT TTG
Sbjct: 219 FSQVV---SNQLDMKLRDDLERLKKIRNHRGLRHYWGLCVRGQHTTTTG 264
>gi|357484765|ref|XP_003612670.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|355514005|gb|AES95628.1| 40S ribosomal protein S18 [Medicago truncatula]
Length = 148
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 87/109 (79%), Gaps = 3/109 (2%)
Query: 20 GCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGK 79
C RF+NI KKAD+D+N RAG+ S E+D I+T++ NPRQ+K+P WFLNR+KD DGK
Sbjct: 43 SCFWRFANICCKKADVDMNMRAGKLSAAELDNIMTVVANPRQFKVPYWFLNRKKDYKDGK 102
Query: 80 YSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+SQ++ + QLD KLR+DLERLKKIR HRG+RHYWGL VRGQHT TTG
Sbjct: 103 FSQVV---SNQLDMKLRDDLERLKKIRNHRGLRHYWGLCVRGQHTTTTG 148
>gi|118372788|ref|XP_001019588.1| ribosomal protein S13p/S18e containing protein [Tetrahymena
thermophila]
gi|319443368|pdb|2XZM|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443403|pdb|2XZN|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|89301355|gb|EAR99343.1| ribosomal protein S13p/S18e containing protein [Tetrahymena
thermophila SB210]
gi|315570327|tpg|DAA33982.1| TPA_exp: 40S ribosomal protein rpS18e [Tetrahymena thermophila]
Length = 155
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 99/139 (71%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDGKR ALT I+G GRRF+ I+ K ID N RAG +E++ +KI ++ +P
Sbjct: 18 LNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGLLTEDQCNKITDLIADPE 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ IP W LNR D DGK Q+ ++ LD+K+REDLERLKKI++HRG+RH+WGL+VR
Sbjct: 78 AHGIPTWLLNRINDFKDGKNYQM---ASNTLDTKMREDLERLKKIKSHRGLRHFWGLKVR 134
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQHTKT+GR G GV +K
Sbjct: 135 GQHTKTSGRHGVVCGVVRK 153
>gi|357484773|ref|XP_003612674.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|355514009|gb|AES95632.1| 40S ribosomal protein S18 [Medicago truncatula]
Length = 150
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 87/109 (79%), Gaps = 3/109 (2%)
Query: 20 GCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGK 79
C RF+NI KKAD+D+N RAG+ S E+D I+T++ NPRQ+K+P WFLNR+KD DGK
Sbjct: 45 SCFWRFANICCKKADVDMNMRAGKLSAAELDNIMTVVANPRQFKVPYWFLNRKKDYKDGK 104
Query: 80 YSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+SQ++ + QLD KLR+DLERLKKIR HRG+RHYWGL VRGQHT TTG
Sbjct: 105 FSQVV---SNQLDMKLRDDLERLKKIRNHRGLRHYWGLCVRGQHTTTTG 150
>gi|357484761|ref|XP_003612668.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|355514003|gb|AES95626.1| 40S ribosomal protein S18 [Medicago truncatula]
Length = 148
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 87/109 (79%), Gaps = 3/109 (2%)
Query: 20 GCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGK 79
C RF+NI +KAD+D+N RAG+ S E+D I+T++ NPRQ+K+PDWFLNR+KD DGK
Sbjct: 43 SCFWRFANICCEKADVDMNMRAGKLSAAELDNIMTVVANPRQFKVPDWFLNRKKDYKDGK 102
Query: 80 YSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+SQ++ + QLD KLR+D ERLKKIR HRG+RHYWGLRVRGQHT T G
Sbjct: 103 FSQLV---SNQLDMKLRDDPERLKKIRNHRGLRHYWGLRVRGQHTTTIG 148
>gi|414873321|tpg|DAA51878.1| TPA: hypothetical protein ZEAMMB73_966926 [Zea mays]
Length = 107
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 89/101 (88%), Gaps = 3/101 (2%)
Query: 40 RAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDL 99
RAGE + EE+++++T++ NPRQ+K+PDWFLNR+KD DG++SQ++ + LD KLR+DL
Sbjct: 10 RAGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVV---SNALDMKLRDDL 66
Query: 100 ERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
ERLKKIR HRG+RHYWGLRVRGQHTKTTGRRG+TVGVSKK+
Sbjct: 67 ERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 107
>gi|27661504|ref|XP_232915.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
gi|109476520|ref|XP_001058861.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
Length = 170
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 104/140 (74%), Gaps = 9/140 (6%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNID +++ FA+TA KG +R++++VL+KA IDL K AGE +E++V+++ITIM NPR
Sbjct: 16 LNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELTEDKVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QY+IP QK + DG+ SQ+ LD+KLRE+LERLKKIRAHRG+RH+WGL V
Sbjct: 76 QYEIP------QKGVRDGRCSQVPANG---LDNKLREELERLKKIRAHRGLRHFWGLHVH 126
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
Q T + G RG TVG SKKK
Sbjct: 127 CQLTMSHGCRGYTVGASKKK 146
>gi|300174376|gb|ADJ68156.1| putative RpS18 protein [Cecidostiba fungosa]
gi|300174378|gb|ADJ68157.1| putative RpS18 protein [Cecidostiba fungosa]
gi|300174380|gb|ADJ68158.1| putative RpS18 protein [Cecidostiba fungosa]
gi|300174382|gb|ADJ68159.1| putative RpS18 protein [Cecidostiba fungosa]
gi|300174384|gb|ADJ68160.1| putative RpS18 protein [Cecidostiba fungosa]
gi|300174386|gb|ADJ68161.1| putative RpS18 protein [Cecidostiba fungosa]
gi|300174388|gb|ADJ68162.1| putative RpS18 protein [Cecidostiba fungosa]
gi|300174390|gb|ADJ68163.1| putative RpS18 protein [Cecidostiba fungosa]
gi|300174392|gb|ADJ68164.1| putative RpS18 protein [Cecidostiba fungosa]
gi|300174394|gb|ADJ68165.1| putative RpS18 protein [Caenacis lauta]
Length = 85
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 82/88 (93%), Gaps = 3/88 (3%)
Query: 18 IKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVD 77
IKG GRR++NIVLKKADIDL+KRAGECSEEEV+KI+TIM NPRQYKIPDWFLNRQKDIVD
Sbjct: 1 IKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPRQYKIPDWFLNRQKDIVD 60
Query: 78 GKYSQILLTSTAQLDSKLREDLERLKKI 105
GKYSQ+ +++ LDSKLREDLER+KKI
Sbjct: 61 GKYSQL---TSSNLDSKLREDLERMKKI 85
>gi|241865174|gb|ACS68665.1| ribosomal protein S18 [Sonneratia alba]
gi|241865406|gb|ACS68735.1| ribosomal protein S18 [Sonneratia alba]
Length = 105
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 89/105 (84%), Gaps = 3/105 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV KKAD+D+NKRAGE S E+D ++ I+ NPR
Sbjct: 4 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELDNLMVIVANPR 63
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKI 105
Q+KIPDWFLNR+KD DGKYSQ++ + LD KLR+DLERLKKI
Sbjct: 64 QFKIPDWFLNRKKDYKDGKYSQVV---SNALDMKLRDDLERLKKI 105
>gi|324537231|gb|ADY49494.1| 40S ribosomal protein S18 [Ascaris suum]
Length = 91
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 82/92 (89%), Gaps = 3/92 (3%)
Query: 49 VDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAH 108
++K+ +M NP+QYKIP+WFLNRQKDI DGKYSQ L T+ LD+KLREDLERLKKIR H
Sbjct: 1 MEKLTQVMQNPKQYKIPNWFLNRQKDIKDGKYSQCLSTA---LDNKLREDLERLKKIRLH 57
Query: 109 RGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
RG+RHYWGLRVRGQHTKTTGR+GRTVGVSKKK
Sbjct: 58 RGLRHYWGLRVRGQHTKTTGRKGRTVGVSKKK 89
>gi|109073538|ref|XP_001090113.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Macaca
mulatta]
gi|297292185|ref|XP_002804033.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
gi|66347229|emb|CAI95617.1| ribosomal protein S18 [Homo sapiens]
gi|119600194|gb|EAW79788.1| hCG1777176, isoform CRA_a [Homo sapiens]
gi|119624099|gb|EAX03694.1| ribosomal protein S18, isoform CRA_a [Homo sapiens]
gi|119624102|gb|EAX03697.1| ribosomal protein S18, isoform CRA_a [Homo sapiens]
gi|119624104|gb|EAX03699.1| ribosomal protein S18, isoform CRA_a [Homo sapiens]
gi|149043392|gb|EDL96843.1| rCG60872, isoform CRA_b [Rattus norvegicus]
gi|355756127|gb|EHH59874.1| hypothetical protein EGM_10087 [Macaca fascicularis]
Length = 82
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 77/85 (90%), Gaps = 3/85 (3%)
Query: 56 MTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYW 115
M NPRQYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+W
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFW 57
Query: 116 GLRVRGQHTKTTGRRGRTVGVSKKK 140
GLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 58 GLRVRGQHTKTTGRRGRTVGVSKKK 82
>gi|300120359|emb|CBK19913.2| unnamed protein product [Blastocystis hominis]
gi|300175444|emb|CBK20755.2| unnamed protein product [Blastocystis hominis]
gi|300175526|emb|CBK20837.2| unnamed protein product [Blastocystis hominis]
Length = 111
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 91/112 (81%), Gaps = 3/112 (2%)
Query: 29 VLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTST 88
V KKA+ID+++RAGE S +E++K+I +++ P Q+ IP+WFLNRQKD+ GKY Q++ +
Sbjct: 3 VCKKAEIDISRRAGELSNDEIEKLIAVISTPLQFDIPEWFLNRQKDVETGKYRQVV---S 59
Query: 89 AQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
L + LREDL RLKK+RA+RG+RHYW L+VRGQHTKTTGR G++VGVS KK
Sbjct: 60 NNLQANLREDLNRLKKMRANRGLRHYWNLKVRGQHTKTTGRFGKSVGVSTKK 111
>gi|349804855|gb|AEQ17900.1| putative 40s ribosomal protein s18 [Hymenochirus curtipes]
Length = 81
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/83 (85%), Positives = 76/83 (91%), Gaps = 3/83 (3%)
Query: 58 NPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGL 117
NPRQYKIPDWFLNRQKDI DGKYSQ+L LD+KLREDLERLKKI+AHRG+RH+WGL
Sbjct: 2 NPRQYKIPDWFLNRQKDIKDGKYSQVLANG---LDNKLREDLERLKKIKAHRGLRHFWGL 58
Query: 118 RVRGQHTKTTGRRGRTVGVSKKK 140
RVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 59 RVRGQHTKTTGRRGRTVGVSKKK 81
>gi|226473484|emb|CAX71427.1| ribosomal protein S18 [Schistosoma japonicum]
Length = 82
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 80/85 (94%), Gaps = 3/85 (3%)
Query: 56 MTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYW 115
M+NPRQYKIPDWFLNRQKD+ DGK+SQ++ +A L++KLREDLERLK+IR+HRG+RHYW
Sbjct: 1 MSNPRQYKIPDWFLNRQKDVDDGKHSQLM---SAALETKLREDLERLKRIRSHRGIRHYW 57
Query: 116 GLRVRGQHTKTTGRRGRTVGVSKKK 140
GLRVRGQHTKTTGRRGRTVGVS+KK
Sbjct: 58 GLRVRGQHTKTTGRRGRTVGVSRKK 82
>gi|67968820|dbj|BAE00767.1| unnamed protein product [Macaca fascicularis]
Length = 82
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 76/85 (89%), Gaps = 3/85 (3%)
Query: 56 MTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYW 115
M NPRQYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+W
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFW 57
Query: 116 GLRVRGQHTKTTGRRGRTVGVSKKK 140
GLRVRGQHTKTTGRRG TVGVSKKK
Sbjct: 58 GLRVRGQHTKTTGRRGCTVGVSKKK 82
>gi|297292320|ref|XP_002804062.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
Length = 82
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 75/85 (88%), Gaps = 3/85 (3%)
Query: 56 MTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYW 115
M NPRQYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+W
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFW 57
Query: 116 GLRVRGQHTKTTGRRGRTVGVSKKK 140
GLRVRGQH KTTGR GRTVGVSKKK
Sbjct: 58 GLRVRGQHAKTTGRCGRTVGVSKKK 82
>gi|308163385|gb|EFO65727.1| Ribosomal protein S18 [Giardia lamblia P15]
Length = 154
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 94/140 (67%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+TNI GK + AL IKG GRRF+N+ LKKA+ID++KRAGE + E D ++ ++ +P
Sbjct: 17 FNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLEDPL 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ IP W LNR D GK IL+ + A S R DLERL+K R RG+RH+ L+VR
Sbjct: 77 SHGIPPWMLNRNNDFESGKDMHILVNTIA---STHRADLERLRKTRCERGVRHHHNLKVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTK+TGRRG VGV +KK
Sbjct: 134 GQHTKSTGRRGHVVGVQRKK 153
>gi|159107620|ref|XP_001704088.1| Ribosomal protein S18 [Giardia lamblia ATCC 50803]
gi|157432138|gb|EDO76414.1| Ribosomal protein S18 [Giardia lamblia ATCC 50803]
Length = 154
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 94/140 (67%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+TNI GK + AL IKG GRRF+N+ LKKA+ID++KRAGE + E D ++ ++ +P
Sbjct: 17 FNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLEDPL 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ IP W LNR D GK IL+ + A S R DLERL+K R RG+RH+ L+VR
Sbjct: 77 SHGIPAWMLNRNNDFESGKDMHILVNTIA---STHRADLERLRKTRCERGVRHHHNLKVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTK+TGRRG VGV +KK
Sbjct: 134 GQHTKSTGRRGHVVGVQRKK 153
>gi|194771388|ref|XP_001967671.1| GF22723 [Drosophila ananassae]
gi|190619389|gb|EDV34913.1| GF22723 [Drosophila ananassae]
Length = 97
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 75/81 (92%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP
Sbjct: 16 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYS 81
QYK+P+WFLNRQKDIVDGKY
Sbjct: 76 QYKVPNWFLNRQKDIVDGKYC 96
>gi|253745946|gb|EET01539.1| Ribosomal protein S18 [Giardia intestinalis ATCC 50581]
Length = 154
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 94/140 (67%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+TNI GK + AL IKG GRRF+N+ LKKA+ID++KRAGE + E D ++ ++ +P
Sbjct: 17 FNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLEDPL 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ IP W LNR D GK IL+ + A S R DLERL+K R RG+RH+ L+VR
Sbjct: 77 SHGIPAWMLNRNNDFESGKDMHILVNTIA---STHRMDLERLRKTRCERGVRHHHNLKVR 133
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTK+TGRRG VGV +KK
Sbjct: 134 GQHTKSTGRRGHVVGVQRKK 153
>gi|357444481|ref|XP_003592518.1| 40S ribosomal protein S18 [Medicago truncatula]
gi|355481566|gb|AES62769.1| 40S ribosomal protein S18 [Medicago truncatula]
Length = 85
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 79/88 (89%), Gaps = 3/88 (3%)
Query: 53 ITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMR 112
+T++ NPRQ+K+PDWFLNR+KD DGK+SQ++ + QLD KLR+DLERLKKIR HRG+R
Sbjct: 1 MTVVANPRQFKVPDWFLNRKKDYKDGKFSQVV---SNQLDMKLRDDLERLKKIRNHRGLR 57
Query: 113 HYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
HYWGLRVRGQHTKTTGRRG+TVGVSKK+
Sbjct: 58 HYWGLRVRGQHTKTTGRRGKTVGVSKKR 85
>gi|222433587|gb|ACM51138.1| ribosomal protein S18 [Tetranychus cinnabarinus]
Length = 87
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 81/90 (90%), Gaps = 3/90 (3%)
Query: 29 VLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTST 88
V KKAD+DLNKRAGE +EEEV+K++TIM+NPRQYKIP WFLNRQ+DI DGKYSQ+ ++
Sbjct: 1 VCKKADVDLNKRAGELTEEEVEKLVTIMSNPRQYKIPLWFLNRQRDIKDGKYSQV---TS 57
Query: 89 AQLDSKLREDLERLKKIRAHRGMRHYWGLR 118
L++K+R+DLERLKKI+AHRG+RH+WGLR
Sbjct: 58 NSLETKIRDDLERLKKIKAHRGLRHFWGLR 87
>gi|119624103|gb|EAX03698.1| ribosomal protein S18, isoform CRA_d [Homo sapiens]
Length = 144
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 81/96 (84%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLR 96
QYKIPDWFLNRQKD+ DGKYSQ+ A L+ R
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVCTEMRAGLEEGWR 111
>gi|148678284|gb|EDL10231.1| mCG23000, isoform CRA_a [Mus musculus]
Length = 103
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 78/88 (88%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTST 88
QYKIPDWFLNRQKD+ DGKYSQ+ +
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVFWPTV 103
>gi|401878850|gb|AFQ30717.1| putative RpS18, partial [Cecidostiba semifascia]
Length = 78
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 75/81 (92%), Gaps = 3/81 (3%)
Query: 18 IKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVD 77
IKG GRR++NIVLKKADIDL+KRAGECSEEEV+KI+TIM NPRQYKIPDWFLNRQKDIVD
Sbjct: 1 IKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPRQYKIPDWFLNRQKDIVD 60
Query: 78 GKYSQILLTSTAQLDSKLRED 98
GKYSQ+ +++ LDSKLRED
Sbjct: 61 GKYSQL---TSSNLDSKLRED 78
>gi|358058945|dbj|GAA95343.1| hypothetical protein E5Q_01999 [Mixia osmundae IAM 14324]
Length = 488
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/98 (63%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+ G +K+MFALT IKG GRR+SN+VLKKADIDLNKRAGE + +E+++++TI+ +P+
Sbjct: 56 LNTNVSGNKKIMFALTEIKGVGRRYSNVVLKKADIDLNKRAGELNSDELERVVTILQSPQ 115
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLRED 98
YKIP W LNRQKDIVDGKYS I+ + LDSK RED
Sbjct: 116 NYKIPMWMLNRQKDIVDGKYSHIV---SNALDSKYRED 150
>gi|401878852|gb|AFQ30718.1| putative RpS18, partial [Cecidostiba semifascia]
gi|401878854|gb|AFQ30719.1| putative RpS18, partial [Cecidostiba semifascia]
Length = 76
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 73/79 (92%), Gaps = 3/79 (3%)
Query: 20 GCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGK 79
G GRR++NIVLKKADIDL+KRAGECSEEEV+KI+TIM NPRQYKIPDWFLNRQKDIVDGK
Sbjct: 1 GVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPRQYKIPDWFLNRQKDIVDGK 60
Query: 80 YSQILLTSTAQLDSKLRED 98
YSQ+ +++ LDSKLRED
Sbjct: 61 YSQL---TSSNLDSKLRED 76
>gi|402466805|gb|EJW02228.1| hypothetical protein EDEG_03346 [Edhazardia aedis USNM 41457]
Length = 157
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG +++ ALT I+G GRRF++ ++KKA + +NKRAGE S E++ I +++NP +
Sbjct: 22 NTNIDGNKRIPMALTDIRGIGRRFADAIVKKAGVSVNKRAGELSAAELESIQNVISNPVE 81
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP WFLNRQ+D DG SQ++ LD+ R +ER KK+R +R R GL+VRG
Sbjct: 82 YNIPVWFLNRQRDFTDGTSSQLVANG---LDACFRLYVERGKKMRHNRVCRLAAGLKVRG 138
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+ GR GR V V KKK
Sbjct: 139 QRTKSNGRHGRKVSVIKKK 157
>gi|145512882|ref|XP_001442352.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409705|emb|CAK74955.1| unnamed protein product [Paramecium tetraurelia]
Length = 150
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 102/140 (72%), Gaps = 8/140 (5%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+++ + + +IKG GRRF+ + K +DL KRAGE +++E KI ++ +PR
Sbjct: 18 LNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVIKSPR 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ ++R DGK Q+ +T +L++KLREDLER+KKI+ +RG+RH+WGLRVR
Sbjct: 78 SLQHFQDEISR-----DGKNYQV---TTNELETKLREDLERMKKIKCNRGLRHHWGLRVR 129
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQHTKTTGR G+T+GV +KK
Sbjct: 130 GQHTKTTGRGGQTLGVERKK 149
>gi|444722266|gb|ELW62964.1| 40S ribosomal protein S18 [Tupaia chinensis]
Length = 118
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 77/99 (77%), Gaps = 3/99 (3%)
Query: 16 TAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDI 75
+G GRR++++V KAD DL KRA E +EEE ++++TIM NPRQYKIPDWFLNRQKD+
Sbjct: 23 PGTQGVGRRYAHVVRGKADTDLTKRAAELTEEEGERVVTIMQNPRQYKIPDWFLNRQKDV 82
Query: 76 VDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHY 114
DGKYSQ+L LD+KL EDL RLK++ AHRG+RH+
Sbjct: 83 KDGKYSQVLANG---LDNKLHEDLGRLKEMWAHRGLRHF 118
>gi|387594622|gb|EIJ89646.1| ribosomal protein S18 [Nematocida parisii ERTm3]
gi|387596532|gb|EIJ94153.1| ribosomal protein S18 [Nematocida parisii ERTm1]
Length = 154
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 98/139 (70%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNI+G+ ++ +LT I+G G R S ++ KKA+ID + RAG+ +E++D I I+ +P+
Sbjct: 19 NTNINGRSTIIRSLTGIRGIGLRVSTLLCKKANIDTSLRAGQVEQEKLDVISKILESPQS 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y +PDW LNRQKD + G+Y Q++ Q+++ R LER K+++ RG+R GL+V G
Sbjct: 79 YGVPDWMLNRQKDPLTGEYKQLI---ANQVEADYRLYLERAKRVKHIRGLRLLKGLKVNG 135
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+ GRRG+TVGVSKKK
Sbjct: 136 QRTKSNGRRGKTVGVSKKK 154
>gi|262192754|gb|ACY30447.1| RPS18.A-like protein [Liriodendron tulipifera]
Length = 197
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 100/141 (70%), Gaps = 8/141 (5%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRF+NIV K + AGE S E++ ++ I+ NP
Sbjct: 64 LNTNVDGKQKIMFALTSIKGIGRRFANIVCKGRRRH-EQEAGELSAAELENLMVIVANPD 122
Query: 61 QYKIPDWFLNRQKDIVDG-KYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+ F Q++ + G +YSQ++ + LD KLR+D ++ + HRG+RHYWGLRV
Sbjct: 123 SSRFQTGF--EQEEGLQGWRYSQVV---SNALDMKLRDDWT-TEEDQDHRGLRHYWGLRV 176
Query: 120 RGQHTKTTGRRGRTVGVSKKK 140
RGQHTKTTGRRG+TVGVSKK+
Sbjct: 177 RGQHTKTTGRRGKTVGVSKKR 197
>gi|378756508|gb|EHY66532.1| 30S ribosomal protein S13p/S18e [Nematocida sp. 1 ERTm2]
Length = 154
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 96/139 (69%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNI+G+ ++ +LT I+G G R S ++ KKA ID RAG+ +E++D I I+ NP+
Sbjct: 19 NTNINGRSTIIRSLTGIRGIGLRVSTLLCKKAGIDTTLRAGQVEQEKLDTISKILENPQS 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ +P+W LNRQKD + G+Y Q++ Q+++ R LER K+++ RG+R GL+V G
Sbjct: 79 FGVPEWMLNRQKDPLTGEYKQLI---ANQVEADYRLYLERAKRVKHIRGLRLLKGLKVNG 135
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+ GRRG+TVGVSKKK
Sbjct: 136 QRTKSNGRRGKTVGVSKKK 154
>gi|429961944|gb|ELA41488.1| hypothetical protein VICG_01472 [Vittaforma corneae ATCC 50505]
Length = 157
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 94/139 (67%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG +K+ +ALTAIKG G RF V+ +A + L KRAGE ++EE+ KI ++ +P+
Sbjct: 22 NTNIDGTKKIPYALTAIKGIGMRFGKTVVSRAGVSLQKRAGELTQEEIAKIQEVINDPKA 81
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP + LN QKD+VDG SQ++ +LD LR +E+ KKIR R +R GL+VRG
Sbjct: 82 FGIPGYMLNHQKDVVDGLDSQLV---GIKLDGDLRMRIEKGKKIREIRMLRLAAGLKVRG 138
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+ GR+ + +G K+K
Sbjct: 139 QRTKSNGRKSKALGAPKRK 157
>gi|123492382|ref|XP_001326044.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
gi|121908953|gb|EAY13821.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
Length = 155
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 97/140 (69%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+STN+DG+R + ALT I G GRRF+ V+++A +D +RAG + +E + I++I+ NP
Sbjct: 18 LSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+++IP W LNR+ D G+ + + T L + +R ++ER+KK+R RG+RH GL+VR
Sbjct: 78 EHQIPVWMLNRRFDRATGQNTHWVATD---LSANIRAEIERMKKMRMKRGIRHGLGLKVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG +GV +KK
Sbjct: 135 GQCTKSTGRRGGALGVERKK 154
>gi|401826728|ref|XP_003887457.1| 40S ribosomal protein S18 [Encephalitozoon hellem ATCC 50504]
gi|395459975|gb|AFM98476.1| 40S ribosomal protein S18 [Encephalitozoon hellem ATCC 50504]
Length = 154
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 96/140 (68%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG +++ FALT I+G GRR S + K+ IDL KRAGE +EEE+ +I + +P
Sbjct: 18 LNTNIDGTKRIAFALTKIRGVGRRISTAICKRLGIDLEKRAGEMTEEEMKRISDAILDPA 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
IP+ ++N QKDI+DG S ++ T +LD+ LR +ER KK + R R GL+VR
Sbjct: 78 SVGIPESYMNHQKDIIDGTTSHLIGT---KLDADLRMMIERGKKNKRIRACRLDVGLKVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+ GRRG+++GVS+KK
Sbjct: 135 GQRTKSNGRRGKSMGVSRKK 154
>gi|123367594|ref|XP_001297089.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
gi|123448087|ref|XP_001312777.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
gi|123453508|ref|XP_001314734.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
gi|123475112|ref|XP_001320735.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
gi|123479230|ref|XP_001322774.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
gi|123482954|ref|XP_001323914.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
gi|123503102|ref|XP_001328438.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
gi|121877055|gb|EAX84159.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
gi|121894636|gb|EAX99847.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
gi|121897372|gb|EAY02495.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
gi|121903547|gb|EAY08512.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
gi|121905626|gb|EAY10551.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
gi|121906788|gb|EAY11691.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
gi|121911381|gb|EAY16215.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
Length = 155
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 97/140 (69%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+STN+DG+R + ALT I G GRRF+ V+++A +D +RAG + +E + I++I+ NP
Sbjct: 18 LSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSIIQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+++IP W LNR+ D G+ + + T L + +R ++ER+KK+R RG+RH GL+VR
Sbjct: 78 EHQIPVWMLNRRFDRATGQNTHWVATD---LGANIRAEIERMKKMRMKRGIRHGLGLKVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG +GV +KK
Sbjct: 135 GQCTKSTGRRGGALGVERKK 154
>gi|119616402|gb|EAW95996.1| hCG1642200 [Homo sapiens]
Length = 112
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
TNID K+ FA+TAIKG G+R++++VL+KADIDL R GE +E+EV+ +IT+M NP QY
Sbjct: 18 TNIDEWCKITFAITAIKGVGQRYAHVVLRKADIDLTSRVGELTEDEVECVITMMQNPHQY 77
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLE 100
KIP WFLNRQKD+ DGKYSQ L LD+KL EDLE
Sbjct: 78 KIPGWFLNRQKDVKDGKYSQALANG---LDNKLHEDLE 112
>gi|444711387|gb|ELW52333.1| Arrestin domain-containing protein 3 [Tupaia chinensis]
Length = 392
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 61/75 (81%), Gaps = 3/75 (4%)
Query: 56 MTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYW 115
M NPRQY PDWFLNRQKD+ DG YSQ+L LD+KLREDLERLKKIRAHRG+ H+W
Sbjct: 1 MQNPRQYDFPDWFLNRQKDVKDGNYSQVLANG---LDNKLREDLERLKKIRAHRGLHHFW 57
Query: 116 GLRVRGQHTKTTGRR 130
GLRVRGQHTKTTG
Sbjct: 58 GLRVRGQHTKTTGHH 72
>gi|14591411|ref|NP_143491.1| 30S ribosomal protein S13 [Pyrococcus horikoshii OT3]
gi|6226061|sp|O74021.1|RS13_PYRHO RecName: Full=30S ribosomal protein S13
gi|3258070|dbj|BAA30753.1| 148aa long hypothetical 30S ribosomal protein S13 [Pyrococcus
horikoshii OT3]
Length = 148
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALTAIKG G F+ +V + A +D +AG ++E+V KI I+ +P
Sbjct: 12 GVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVS 71
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD GK ++ TA+LD +RED+ RL++IRA+RG+RH GL VRG
Sbjct: 72 HGIPRWAVNRPKDYETGKDLHLI---TAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRG 128
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ RRG+TVGVSKKK
Sbjct: 129 QRTRSNFRRGQTVGVSKKK 147
>gi|389852943|ref|YP_006355177.1| 30S ribosomal protein S13 [Pyrococcus sp. ST04]
gi|388250249|gb|AFK23102.1| rpsM, small subunit ribosomal protein S13 [Pyrococcus sp. ST04]
Length = 148
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 96/139 (69%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALTAIKG G F+ +V + A +D +AG ++E+V KI I+++P
Sbjct: 12 GVDLDGHKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILSDPVA 71
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD GK ++ TA+LD +RED+ RL++IRA+RG+RH GL VRG
Sbjct: 72 HGIPRWAVNRPKDYETGKDLHLI---TAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRG 128
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ RRG+TVGVS+KK
Sbjct: 129 QRTRSNFRRGQTVGVSRKK 147
>gi|396081582|gb|AFN83198.1| 30S ribosomal protein S13P [Encephalitozoon romaleae SJ-2008]
Length = 153
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 94/139 (67%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG +++ FALT I+G G R S + K+ IDL KRAGE SEE++ +I + +P
Sbjct: 18 NTNIDGTKRIAFALTGIRGVGIRISTAICKRLGIDLKKRAGEMSEEDMKRIGDAILDPAS 77
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP+ ++N QKD++DG S ++ T +LD+ LR +ER KK + R R GL+VRG
Sbjct: 78 VGIPESYMNHQKDVIDGTTSHLIGT---KLDADLRMMIERGKKNKLIRACRLDVGLKVRG 134
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+ GRRG+++GVS+KK
Sbjct: 135 QRTKSNGRRGKSMGVSRKK 153
>gi|444730250|gb|ELW70638.1| 40S ribosomal protein S18 [Tupaia chinensis]
Length = 110
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 77/111 (69%), Gaps = 12/111 (10%)
Query: 35 IDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSK 94
+DL +RAGE +EEEV+++IT+M NP QYKIPDWFLNRQKD+ DGKYSQ+L LD+K
Sbjct: 1 MDLAERAGELAEEEVERVITVMQNPHQYKIPDWFLNRQKDVKDGKYSQVL---DNDLDNK 57
Query: 95 LREDLERLKKIRAHRGMRHYWGLRVRGQHTK---------TTGRRGRTVGV 136
REDLERLKK RAHRG+ H+ GL V + RR ++VG+
Sbjct: 58 PREDLERLKKTRAHRGLCHFCGLLVEASTLRQLAVVAIAWVCPRRSKSVGL 108
>gi|303389678|ref|XP_003073071.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC
50506]
gi|303302215|gb|ADM11711.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC
50506]
Length = 153
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG +++ FALT I+G G R S + K+ IDL +RAGE SEEE+ +I + +P
Sbjct: 18 NTNIDGTKRIAFALTKIRGVGIRISTAICKRLGIDLKRRAGEMSEEEMKRISDAILDPAS 77
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP+ +LN QKD VDG S ++ T +LD+ LR +ER KK + R R GL+VRG
Sbjct: 78 LGIPESYLNHQKDPVDGTTSHLIGT---KLDADLRMMIERGKKNKRIRACRLDVGLKVRG 134
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+ GRRG+++GVS+KK
Sbjct: 135 QRTKSNGRRGKSMGVSRKK 153
>gi|298674774|ref|YP_003726524.1| 30S ribosomal protein S13 [Methanohalobium evestigatum Z-7303]
gi|298287762|gb|ADI73728.1| ribosomal protein S13P [Methanohalobium evestigatum Z-7303]
Length = 149
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 91/140 (65%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G + V ALT IKG GRR +NIV++ + ID + + G S+EE+D + + + N
Sbjct: 13 MNTDLPGDQPVRLALTGIKGIGRRTANIVVEGSGIDPDTKIGYLSDEEIDTLNSTINNFE 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ +P W LNRQ D G+ +L + LRED+ LKK RA+RG+RH GL+VR
Sbjct: 73 SH-LPSWMLNRQNDPYSGENKHLL---GQDIFMSLREDVNTLKKTRAYRGVRHERGLKVR 128
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGR G T+GVSKKK
Sbjct: 129 GQRTKSTGRGGSTIGVSKKK 148
>gi|18978022|ref|NP_579379.1| 30S ribosomal protein S13 [Pyrococcus furiosus DSM 3638]
gi|397652701|ref|YP_006493282.1| 30S ribosomal protein S13 [Pyrococcus furiosus COM1]
gi|32363354|sp|Q8U0E2.1|RS13_PYRFU RecName: Full=30S ribosomal protein S13
gi|428697919|pdb|3J20|O Chain O, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18893805|gb|AAL81774.1| SSU ribosomal protein S13P [Pyrococcus furiosus DSM 3638]
gi|393190292|gb|AFN04990.1| 30S ribosomal protein S13P [Pyrococcus furiosus COM1]
Length = 148
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALTAIKG G F+ +V + A +D +AG ++E+V KI I+ +P
Sbjct: 12 GVDLDGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILADPVA 71
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD G+ ++ TA+LD +RED+ RL++IRA+RG+RH GL VRG
Sbjct: 72 HGIPRWAVNRPKDYETGRDLHLI---TAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRG 128
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ RRG+TVGVS+KK
Sbjct: 129 QRTRSNFRRGQTVGVSRKK 147
>gi|14520743|ref|NP_126218.1| 30S ribosomal protein S13P [Pyrococcus abyssi GE5]
gi|32363436|sp|Q9V1A0.1|RS13_PYRAB RecName: Full=30S ribosomal protein S13
gi|5457959|emb|CAB49449.1| rps13P SSU ribosomal protein S13P/S18E [Pyrococcus abyssi GE5]
gi|380741282|tpe|CCE69916.1| TPA: 30S ribosomal protein S13P [Pyrococcus abyssi GE5]
Length = 148
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALTAIKG G F+ +V + A +D +AG ++E+V KI I+ +P
Sbjct: 12 GVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEILQDPVA 71
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD G+ ++ TA+LD +RED+ RL++IRA+RG+RH GL VRG
Sbjct: 72 HGIPRWAVNRPKDYETGRDLHLI---TAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRG 128
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ RRG+TVGVS+KK
Sbjct: 129 QRTRSNFRRGQTVGVSRKK 147
>gi|332157867|ref|YP_004423146.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2]
gi|331033330|gb|AEC51142.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2]
Length = 148
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALTAIKG G F+ +V + A +D +AG ++E++ KI I+ +P
Sbjct: 12 GVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQIKKIEEILQDPVA 71
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD GK ++ TA+L+ +RED+ RL++IRA+RG+RH GL VRG
Sbjct: 72 HGIPRWAVNRPKDYETGKDLHLI---TAKLEMAIREDIMRLRRIRAYRGIRHELGLPVRG 128
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ RRG+TVGV+KKK
Sbjct: 129 QRTRSNFRRGQTVGVTKKK 147
>gi|337283746|ref|YP_004623220.1| 30S ribosomal protein S13P [Pyrococcus yayanosii CH1]
gi|334899680|gb|AEH23948.1| 30S ribosomal protein S13P [Pyrococcus yayanosii CH1]
Length = 148
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALT IKG G F+ +V + A +D +AG ++E++ KI I+++P
Sbjct: 12 GVDLDGHKQLRWALTGIKGVGINFATMVCRVAGLDPFMKAGYLTDEQIKKIEEILSDPVA 71
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD G+ ++ TA+LD +RED+ RL++IRA+RG+RH GL VRG
Sbjct: 72 HGIPRWAVNRPKDYETGRDLHLI---TAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRG 128
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ RRG+TVGVS+KK
Sbjct: 129 QRTRSNFRRGQTVGVSRKK 147
>gi|19074361|ref|NP_585867.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1]
gi|51702028|sp|Q8SRP2.1|RS18_ENCCU RecName: Full=40S ribosomal protein S18
gi|19069003|emb|CAD25471.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1]
gi|449329487|gb|AGE95759.1| 40S ribosomal protein S18 [Encephalitozoon cuniculi]
Length = 153
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG +++ FALT I+G G R + + K+ IDL KRAGE E+E+ +I + +P
Sbjct: 18 NTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAILDPAS 77
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP+ ++N Q+DI+DG S ++ T +LD+ LR +ER KK + R R GL+VRG
Sbjct: 78 VGIPESYMNHQRDIIDGTTSHLIGT---RLDADLRMMIERGKKNKRIRAYRLDVGLKVRG 134
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+ GRRGR++GVS+KK
Sbjct: 135 QRTKSNGRRGRSMGVSRKK 153
>gi|294495901|ref|YP_003542394.1| 30S ribosomal protein S13P [Methanohalophilus mahii DSM 5219]
gi|292666900|gb|ADE36749.1| SSU ribosomal protein S13P [Methanohalophilus mahii DSM 5219]
Length = 148
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 94/140 (67%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ GK+KV++ALT IKG GRR + ++ + A++D ++ G S+E + ++ +
Sbjct: 13 MNTDLQGKQKVLYALTGIKGIGRRTARLIAESAEVDPSETIGYLSDEGIARLNEAIETFE 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ +P W LNRQKD++ G+ IL +D +REDL LKKIRA+RG+RH GL+VR
Sbjct: 73 NH-LPVWMLNRQKDLLTGENKHIL---GQDIDLTIREDLNDLKKIRAYRGIRHERGLKVR 128
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+ GR G T+GVSK +
Sbjct: 129 GQRTKSAGRGGSTIGVSKTR 148
>gi|57641441|ref|YP_183919.1| 30S ribosomal protein S13 [Thermococcus kodakarensis KOD1]
gi|73917914|sp|Q5JJF1.1|RS13_PYRKO RecName: Full=30S ribosomal protein S13
gi|57159765|dbj|BAD85695.1| SSU ribosomal protein S13P [Thermococcus kodakarensis KOD1]
Length = 149
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+IDG ++V +ALT IKG G F+ +VL+ A ID +AG ++E+V KI I+ +P
Sbjct: 13 GVDIDGHKQVRWALTGIKGIGINFATMVLRVAGIDPFMKAGYLTDEQVKKIEEILADPVA 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD GK ++ TA+L RED+ RL++IRA+RG+RH GL VRG
Sbjct: 73 HGIPAWAVNRPKDYETGKDMHLI---TAKLVMAWREDVNRLRRIRAYRGIRHELGLPVRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ R G TVGVS++K
Sbjct: 130 QRTRSNFRHGTTVGVSRRK 148
>gi|32363352|sp|Q8TRR2.2|RS13_METAC RecName: Full=30S ribosomal protein S13
Length = 162
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G + V +ALT + G GRR + ++ K A +D + G EEEV K+ T +
Sbjct: 27 MNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAIGKFE 86
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+P W LNRQKD+ G+ +L T RED+ LKK+RA+RG+RH GL+VR
Sbjct: 87 DI-VPSWMLNRQKDLATGQDKHLLGTDILL---TFREDINNLKKVRAYRGLRHERGLKVR 142
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG TVGVS+KK
Sbjct: 143 GQRTKSTGRRGSTVGVSRKK 162
>gi|20089977|ref|NP_616052.1| 30S ribosomal protein S13 [Methanosarcina acetivorans C2A]
gi|19914940|gb|AAM04532.1| ribosomal protein S13p [Methanosarcina acetivorans C2A]
Length = 182
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G + V +ALT + G GRR + ++ K A +D + G EEEV K+ T +
Sbjct: 47 MNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAIGKFE 106
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+P W LNRQKD+ G+ +L T RED+ LKK+RA+RG+RH GL+VR
Sbjct: 107 DI-VPSWMLNRQKDLATGQDKHLLGTDILL---TFREDINNLKKVRAYRGLRHERGLKVR 162
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG TVGVS+KK
Sbjct: 163 GQRTKSTGRRGSTVGVSRKK 182
>gi|116754907|ref|YP_844025.1| 30S ribosomal protein S13P [Methanosaeta thermophila PT]
gi|121694236|sp|A0B9L1.1|RS13_METTP RecName: Full=30S ribosomal protein S13
gi|116666358|gb|ABK15385.1| SSU ribosomal protein S13P [Methanosaeta thermophila PT]
Length = 159
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 94/139 (67%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DGK++V ALT IKG GRR + + KA +D G+ EE+++ + ++ + R
Sbjct: 20 NTDLDGKKQVQMALTGIKGVGRRLARVFAVKAGVDPCATLGKLPEEQIEALKNVIESVRD 79
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP W +NR+KDI+ G ++ A++ + LREDL+ +KK R+++G+RH GLRVRG
Sbjct: 80 -NIPAWMMNRRKDIITGVDKHVM---GAEVLTTLREDLDIMKKTRSYKGIRHELGLRVRG 135
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++TGR G TVGV++KK
Sbjct: 136 QRTRSTGRSGATVGVTRKK 154
>gi|304314284|ref|YP_003849431.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str.
Marburg]
gi|302587743|gb|ADL58118.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str.
Marburg]
Length = 149
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+IDG + + ALT+IKG G+ S ++ A DLN+R G S+EE++++ + NP +Y
Sbjct: 15 DIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAIKNPAKYN 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IP W +NR+ D G+ ++ + LD LREDL R++K R+++G RH GL VRGQ
Sbjct: 75 IPSWMINRRNDYETGEDKHLI---ESDLDMCLREDLNRMRKTRSYKGRRHELGLPVRGQR 131
Query: 124 TKTTGRRGRTVGVSKKK 140
TK+T R+G +VGV +KK
Sbjct: 132 TKSTFRKGSSVGVRRKK 148
>gi|444723832|gb|ELW64462.1| Synaptogyrin-1 [Tupaia chinensis]
Length = 346
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 88/110 (80%), Gaps = 4/110 (3%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNI+G+RK FA+TA+KG GRR++ +V +KAD+DL +RAG +EEEV++++T+M NPR
Sbjct: 16 LNTNIEGRRKTAFAITAVKGVGRRYARVVQEKADMDLTERAGALTEEEVERVVTVMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRG 110
Q K PDWFLNRQK++ DGK+SQ+L + LD KLREDL RLKK+R G
Sbjct: 76 QDKTPDWFLNRQKEVKDGKHSQVLASG---LD-KLREDLGRLKKVRPVEG 121
>gi|126465712|ref|YP_001040821.1| 30S ribosomal protein S13 [Staphylothermus marinus F1]
gi|158706279|sp|A3DMQ3.1|RS13_STAMF RecName: Full=30S ribosomal protein S13
gi|126014535|gb|ABN69913.1| SSU ribosomal protein S13P [Staphylothermus marinus F1]
Length = 151
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
T+IDG K ++ L IKG G + + ++ ID R G ++EE+ +I +++NP
Sbjct: 15 GTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLLSNPSA 74
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP W LNR+KD V GK ++ A+L +++D+ER KKI++ RG+RH GL+VRG
Sbjct: 75 YDIPSWMLNRRKDYVTGKDMHLI---GAELIFYVKQDIEREKKIKSWRGIRHALGLKVRG 131
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T+TTGR G TVGV KK+
Sbjct: 132 QRTRTTGRLGLTVGVRKKR 150
>gi|374635698|ref|ZP_09707292.1| ribosomal protein S13P [Methanotorris formicicus Mc-S-70]
gi|373561551|gb|EHP87784.1| ribosomal protein S13P [Methanotorris formicicus Mc-S-70]
Length = 152
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 89/138 (64%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+IDGK+ + AL I G G + +++ A +D K AG ++EEV KI I+++P ++
Sbjct: 17 TDIDGKKPLARALQEIYGIGEAITKAIIRVAKLDEKKLAGYLTDEEVKKIEEILSDPAKF 76
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD G+ I+ + L ++ED+ RLKKIR +RG+RH GL RGQ
Sbjct: 77 GIPSWMFNRKKDYYTGEDKHII---ESDLTIAIQEDINRLKKIRCYRGIRHELGLPCRGQ 133
Query: 123 HTKTTGRRGRTVGVSKKK 140
TK+T RRG+TVGVS++K
Sbjct: 134 RTKSTFRRGQTVGVSRRK 151
>gi|297527615|ref|YP_003669639.1| 30S ribosomal protein S13P [Staphylothermus hellenicus DSM 12710]
gi|297256531|gb|ADI32740.1| ribosomal protein S13P [Staphylothermus hellenicus DSM 12710]
Length = 157
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
T+IDG K ++ L IKG G + + ++ ID R G ++EE+ +I +++NP
Sbjct: 21 GTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLLSNPSA 80
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP W LNR+KD V GK ++ A+L +++D+ER KKI++ RG+RH GL+VRG
Sbjct: 81 YDIPSWMLNRRKDYVTGKDMHLI---GAELIFYVKQDIEREKKIKSWRGIRHALGLKVRG 137
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T+TTGR G TVGV +K+
Sbjct: 138 QRTRTTGRLGLTVGVRRKR 156
>gi|224062852|ref|XP_002300902.1| predicted protein [Populus trichocarpa]
gi|222842628|gb|EEE80175.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 74/104 (71%), Gaps = 12/104 (11%)
Query: 12 MFALTAIKGCGRRFSNIVLKKADIDLNKRAGECS---------EEEVDKIITIMTNPRQY 62
MFALT+IKG GRRF+NIV KKAD+D+NKR+ S + ++TI+ NP Q+
Sbjct: 1 MFALTSIKGIGRRFANIVCKKADVDMNKRSHSPSLSVLFWLVNYPQQSNLMTIVANPCQF 60
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIR 106
KIPDWFLNRQKD DGKYSQ++ + LD KLR+DLE LKKIR
Sbjct: 61 KIPDWFLNRQKDYTDGKYSQVV---SNALDMKLRDDLECLKKIR 101
>gi|15678064|ref|NP_275178.1| 30S ribosomal protein S13 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3122789|sp|O26141.1|RS13_METTH RecName: Full=30S ribosomal protein S13
gi|2621070|gb|AAB84542.1| ribosomal protein S18 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 149
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+IDG + + ALT+IKG G+ S ++ A DLN+R G S+EE++++ + NP +Y
Sbjct: 15 DIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAIKNPAKYN 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IP W +NR+ D G+ ++ + L+ LREDL R++K R+++G RH GL VRGQ
Sbjct: 75 IPSWMINRRNDYETGEDKHLI---ESDLEMCLREDLNRMRKTRSYKGRRHELGLPVRGQR 131
Query: 124 TKTTGRRGRTVGVSKKK 140
TK+T R+G +VGV +KK
Sbjct: 132 TKSTFRKGSSVGVRRKK 148
>gi|452210693|ref|YP_007490807.1| SSU ribosomal protein S18e (S13p) [Methanosarcina mazei Tuc01]
gi|452100595|gb|AGF97535.1| SSU ribosomal protein S18e (S13p) [Methanosarcina mazei Tuc01]
Length = 152
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G + V +ALT + G GRR + ++ K A +D G +EEV K+ +
Sbjct: 17 MNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDAAIGKFE 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ +P W LNRQKD+ G+ +L T RED+ LKK+RA+RG+RH GL+VR
Sbjct: 77 EI-VPSWMLNRQKDLTTGQDKHLLGTDILL---TFREDINNLKKVRAYRGLRHERGLKVR 132
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG TVGVS+KK
Sbjct: 133 GQRTKSTGRRGSTVGVSRKK 152
>gi|296109383|ref|YP_003616332.1| 30S ribosomal protein S13 [methanocaldococcus infernus ME]
gi|295434197|gb|ADG13368.1| ribosomal protein S13P [Methanocaldococcus infernus ME]
Length = 153
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+IDG +KV+ AL I G G + +++ +ID NK AG ++EEV KI ++ +P ++
Sbjct: 18 TDIDGNKKVIMALQDIYGIGEAMARAIVRVTNIDPNKLAGYLTDEEVKKIEEVLQDPAKF 77
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD V G+ ++ L +ED+ RLK+I+ +RG+RH GL RGQ
Sbjct: 78 GIPSWMFNRRKDYVTGEDKHVI---EGDLIVVKQEDINRLKRIKCYRGIRHELGLPCRGQ 134
Query: 123 HTKTTGRRGRTVGVSKKK 140
TK+T RRG TVGVS++K
Sbjct: 135 RTKSTFRRGPTVGVSRRK 152
>gi|296243122|ref|YP_003650609.1| 30S ribosomal protein S13 [Thermosphaera aggregans DSM 11486]
gi|296095706|gb|ADG91657.1| SSU ribosomal protein S13P [Thermosphaera aggregans DSM 11486]
Length = 162
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 3/136 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ T+IDG +++ L +KG G FS + + +D N R G S+E+V KI ++ NP
Sbjct: 14 LETDIDGSLPLIYGLAEVKGLGYTFSLAITRILGLDPNTRIGYLSDEDVRKIEALVKNPS 73
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Y +P W NR+KD GK ++ A+L ++ED+ER K++R+ RG+RH GL+VR
Sbjct: 74 SYGLPSWMFNRRKDYASGKDLHLV---GAELIYYVKEDIEREKRVRSWRGVRHALGLKVR 130
Query: 121 GQHTKTTGRRGRTVGV 136
GQ T+TTGR G TVGV
Sbjct: 131 GQRTRTTGRLGVTVGV 146
>gi|333910735|ref|YP_004484468.1| 30S ribosomal protein S13 [Methanotorris igneus Kol 5]
gi|333751324|gb|AEF96403.1| ribosomal protein S13P [Methanotorris igneus Kol 5]
Length = 152
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 90/138 (65%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DGK+ ++ AL I G G + +++ A +D K AG ++EEV KI I+++P ++
Sbjct: 17 TDVDGKKPLVRALQEIYGIGEAMAKAIVRVAKLDEKKLAGYLTDEEVKKIEEILSDPAKF 76
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD G+ ++ A L ++ED+ RLKKIR +RG+RH GL RGQ
Sbjct: 77 GIPSWMFNRRKDYHTGEDKHVI---EADLTIAIQEDINRLKKIRCYRGIRHELGLPCRGQ 133
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++T RRG+TVGVS++K
Sbjct: 134 RTRSTFRRGQTVGVSRRK 151
>gi|21228257|ref|NP_634179.1| 30S ribosomal protein S13 [Methanosarcina mazei Go1]
gi|32363348|sp|Q8PV19.1|RS13_METMA RecName: Full=30S ribosomal protein S13
gi|20906714|gb|AAM31851.1| SSU ribosomal protein S13P [Methanosarcina mazei Go1]
Length = 162
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G + V +ALT + G GRR + ++ K A +D G +EEV K+ +
Sbjct: 27 MNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDAAIGKFE 86
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ +P W LNRQKD+ G+ +L T + RED+ LKK+RA+RG+RH GL+VR
Sbjct: 87 EI-VPSWMLNRQKDLTTGQDKHLLGTD---ILLTFREDINNLKKVRAYRGLRHERGLKVR 142
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG TVGVS+KK
Sbjct: 143 GQRTKSTGRRGSTVGVSRKK 162
>gi|310771932|emb|CBH28903.1| 40S RIBOSOMAL PROTEIN S18 [Anncaliia algerae]
Length = 159
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+TN+DG RKV A+T IKG G+R + ++K+ ID +KRAGE +EEE++ ++ ++NP+
Sbjct: 23 FNTNVDGNRKVAAAITMIKGIGKRMAEAIVKRTGIDSSKRAGELNEEELEILVDGISNPK 82
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ IP+W NR D VDG S ++ T Q+D+ R LER KKI + R R L+VR
Sbjct: 83 KLNIPEWMFNRVFDPVDGTTSHLIGT---QIDATYRLQLERSKKIESVRSYRLMNNLKVR 139
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+ GR G TVGVS+KK
Sbjct: 140 GQRTKSNGRGGSTVGVSRKK 159
>gi|256810446|ref|YP_003127815.1| 30S ribosomal protein S13 [Methanocaldococcus fervens AG86]
gi|256793646|gb|ACV24315.1| ribosomal protein S13P [Methanocaldococcus fervens AG86]
Length = 150
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 90/138 (65%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG +K++ AL I G G + +++ A +D +K AG ++EEV KI I+ +P ++
Sbjct: 15 TDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTDEEVKKIEEILADPAKF 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD V G+ ++ + + +ED+ RLK++R +RG+RH GL RGQ
Sbjct: 75 GIPSWMFNRRKDYVTGEDKHVIESDLMVVK---QEDINRLKRVRCYRGIRHELGLPCRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
TK+T RRG+TVGVS++K
Sbjct: 132 RTKSTFRRGQTVGVSRRK 149
>gi|73667630|ref|YP_303645.1| 30S ribosomal protein S13 [Methanosarcina barkeri str. Fusaro]
gi|91207705|sp|Q46GC7.1|RS13_METBF RecName: Full=30S ribosomal protein S13
gi|72394792|gb|AAZ69065.1| SSU ribosomal protein S13P [Methanosarcina barkeri str. Fusaro]
Length = 162
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G + V +ALT + G GRR + ++ K A +D G +EEV K+ + N
Sbjct: 27 MNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAIGN-F 85
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ +P W LNRQKD+ G+ +L T RED+ LKK+RA+RG+RH GL+VR
Sbjct: 86 EGIVPSWMLNRQKDLATGQDKHLLGTDILL---TFREDINNLKKVRAYRGLRHERGLKVR 142
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG TVGVS++K
Sbjct: 143 GQRTKSTGRRGSTVGVSRRK 162
>gi|254167094|ref|ZP_04873947.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
gi|254167757|ref|ZP_04874607.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
gi|197623285|gb|EDY35850.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
gi|197623950|gb|EDY36512.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
Length = 150
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 92/138 (66%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG R V++A+ IKG G R + ++K ++D K+ GE S+E++++I ++ +
Sbjct: 15 TDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLIEEKIEE 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W +N +KD G+ IL T +LD + ++D+ RLK+I+ +RG+RH GLRVRGQ
Sbjct: 75 MLPSWMMNHRKDYFTGEDRHILST---ELDLQKQDDINRLKRIKCYRGVRHEKGLRVRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++ GR G TVGVS+KK
Sbjct: 132 RTRSNGRSGLTVGVSRKK 149
>gi|289597069|ref|YP_003483765.1| 30S ribosomal protein S13 [Aciduliprofundum boonei T469]
gi|289534856|gb|ADD09203.1| ribosomal protein S13P [Aciduliprofundum boonei T469]
Length = 148
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 92/138 (66%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG R V++A+ IKG G R + ++K ++D K+ GE S+E++++I ++ +
Sbjct: 13 TDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLIEEKIEE 72
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W +N +KD G+ IL T +LD + ++D+ RLK+I+ +RG+RH GLRVRGQ
Sbjct: 73 MLPSWMMNHRKDYFTGEDRHILST---ELDLQKQDDINRLKRIKCYRGVRHEKGLRVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++ GR G TVGVS+KK
Sbjct: 130 RTRSNGRSGLTVGVSRKK 147
>gi|242398330|ref|YP_002993754.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739]
gi|242264723|gb|ACS89405.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739]
Length = 156
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+ +IDG +++ ALT I+G G F+ ++ + A +D +AG +EE+V I ++ +P +
Sbjct: 20 NVDIDGHKQLRLALTGIRGIGVNFATVICRIAGLDPKMKAGYLTEEQVKAIEAVLEDPAK 79
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ +P W LNR KD G+ ++ A+L RED+ RL+KIRA+RG+RH GL +RG
Sbjct: 80 HGLPSWILNRPKDYEQGRDMHLI---GAKLVMAWREDVNRLRKIRAYRGIRHELGLPLRG 136
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ RRG T+GVS++K
Sbjct: 137 QRTRSNFRRGLTLGVSRRK 155
>gi|341582030|ref|YP_004762522.1| 30S ribosomal protein S13P [Thermococcus sp. 4557]
gi|340809688|gb|AEK72845.1| 30S ribosomal protein S13P [Thermococcus sp. 4557]
Length = 149
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALT I+G G F+ +VL+ A ID + G ++E+V KI ++ +P
Sbjct: 13 GVDLDGNKQLRWALTGIRGIGINFATMVLRVAGIDPYMKTGYLTDEQVKKIEKVLEDPIA 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NRQKD GK ++ TA+L RED+ RL++IRA+RG+RH GL +RG
Sbjct: 73 HGIPAWAVNRQKDYETGKDMHLI---TAKLVMAWREDVNRLRRIRAYRGIRHELGLPLRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ R G T+GVS++K
Sbjct: 130 QRTRSNFRHGSTLGVSRRK 148
>gi|393795889|ref|ZP_10379253.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia BG20]
Length = 192
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I G RKV+ LT IKG G F+ +L I+ N G SE +V I ++TNP
Sbjct: 13 VGNDIPGARKVIVGLTQIKGIGYNFATAILDTLKINTNTNIGFLSESDVQSIEKLITNPI 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
P WFLNR+KDI G +L T+ + LR D+ER + + RG RH +GL+VR
Sbjct: 73 AGNFPPWFLNRRKDIETGSNMHLL---TSDIPFTLRNDIERERITNSWRGYRHMYGLKVR 129
Query: 121 GQHTKTTGRRGRTVGVSK 138
GQ T+TTGR+G VGV+K
Sbjct: 130 GQCTRTTGRKGGAVGVAK 147
>gi|409096148|ref|ZP_11216172.1| 30S ribosomal protein S13P [Thermococcus zilligii AN1]
Length = 149
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+++G +++ +ALT I+G G F+ +VL+ A ID +AG ++++V I I+ +P
Sbjct: 13 GVDLNGNKQLRWALTGIRGIGINFATMVLRVAGIDPFMKAGYLTDQQVKLIEKILEDPVA 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD GK ++ TA+L RED+ RLK+IRA+RG+RH GL VRG
Sbjct: 73 HGIPAWAVNRPKDYETGKDMHLI---TAKLAMAWREDINRLKRIRAYRGIRHELGLPVRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ R G TVGVS+KK
Sbjct: 130 QRTRSNFRHGTTVGVSRKK 148
>gi|330506853|ref|YP_004383281.1| 30S ribosomal protein S13p/S18e [Methanosaeta concilii GP6]
gi|328927661|gb|AEB67463.1| ribosomal protein S13p/S18e [Methanosaeta concilii GP6]
Length = 181
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 90/140 (64%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++T++ GKR+V ALT IKG GRR + I ++A +D N G + E+DK+ ++
Sbjct: 33 LNTDLAGKRQVHMALTGIKGVGRRCAKIFTERAGVDPNATLGLLPDAEIDKLKKVVEEDA 92
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+P W +NR+ DI GK I+ L+ LREDL+ +KK+R+++G+RH GLRVR
Sbjct: 93 INILPVWMVNRRGDIETGKDIHIM---GMDLNMTLREDLDLMKKMRSYKGLRHERGLRVR 149
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ T++TGR G VGVS+K+
Sbjct: 150 GQKTRSTGRTGAIVGVSRKR 169
>gi|160948222|emb|CAO94712.1| putative ribosomal protein S18 [Pomphorhynchus laevis]
Length = 78
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
Query: 60 RQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
R+ +IP+WFLNRQKD DG+ +QI ++ LD +LREDLERLKK+R HRG+RHYW RV
Sbjct: 1 RRVQIPNWFLNRQKDYKDGRTTQI---TSNVLDVRLREDLERLKKMRVHRGLRHYWNTRV 57
Query: 120 RGQHTKTTGRRGRTVGVSKKK 140
RGQHT+ +GRRGRTVGVSK K
Sbjct: 58 RGQHTRNSGRRGRTVGVSKTK 78
>gi|240104026|ref|YP_002960335.1| 30S ribosomal protein S13P [Thermococcus gammatolerans EJ3]
gi|239911580|gb|ACS34471.1| SSU ribosomal protein S13P (rps13P) [Thermococcus gammatolerans
EJ3]
Length = 149
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALT IKG G F+ +VL+ A +D +AG ++E+V I I+ +P
Sbjct: 13 GVDLDGHKQLRWALTGIKGIGINFATMVLRVAGLDPYMKAGYLTDEQVKLIEKILEDPVA 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD GK ++ TA+L RED+ RL++IRA+RG+RH GL +RG
Sbjct: 73 HGIPAWAVNRPKDYETGKDMHLI---TAKLVMAWREDINRLRRIRAYRGIRHELGLPLRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ R G TVGVS++K
Sbjct: 130 QRTRSNFRHGTTVGVSRRK 148
>gi|390960763|ref|YP_006424597.1| 30S ribosomal protein S13 [Thermococcus sp. CL1]
gi|390519071|gb|AFL94803.1| 30S ribosomal protein S13P [Thermococcus sp. CL1]
Length = 149
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALT IKG G F+ +VL+ A ID + G ++E+V KI I+ +P
Sbjct: 13 GVDLDGNKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKKIEKILEDPIA 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD GK ++ TA+L RED+ RL++IRA+RG+RH GL +RG
Sbjct: 73 HGIPAWAVNRPKDYETGKDMHLI---TAKLVMAWREDVNRLRRIRAYRGIRHELGLPLRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ R G T+GVS++K
Sbjct: 130 QRTRSNFRHGSTLGVSRRK 148
>gi|374628608|ref|ZP_09700993.1| SSU ribosomal protein S13P [Methanoplanus limicola DSM 2279]
gi|373906721|gb|EHQ34825.1| SSU ribosomal protein S13P [Methanoplanus limicola DSM 2279]
Length = 149
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+ ++DG + V ALT + G G S ++ AD+D G EE V++I ++T+ Q
Sbjct: 14 NADLDGTKSVQIALTGLPGIGMHTSAVISDMADVDPRATLGLLDEEHVERIRNVVTD-YQ 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+P W LNRQKD+ G+ Q+L + L L +D+ R++KIR +RG+RH G +VRG
Sbjct: 73 NLVPVWMLNRQKDVYTGEAKQLL---GSDLSLALEDDINRMRKIRCYRGIRHETGQKVRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK++GRRG TVGVS+KK
Sbjct: 130 QRTKSSGRRGSTVGVSRKK 148
>gi|84489671|ref|YP_447903.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091]
gi|121722917|sp|Q2NFZ3.1|RS13_METST RecName: Full=30S ribosomal protein S13
gi|84372990|gb|ABC57260.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091]
Length = 153
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + ALT I+G G+ F+ + K D+D + + G +E V +I ++ NP+++
Sbjct: 16 DVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVLENPQEFG 75
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IP+WFLNR+ D G+ ++ + L+ LR+DL R+K IR+++G RH GL VRGQ
Sbjct: 76 IPEWFLNRRNDYETGETKHLI---ESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPVRGQR 132
Query: 124 TKTTGRRGRTVGVSKKK 140
TK+T R G +VGVS+ +
Sbjct: 133 TKSTFRHGSSVGVSRTR 149
>gi|268324996|emb|CBH38584.1| 30S ribosomal protein S13P [uncultured archaeon]
Length = 167
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ T++DGKR V +L + G GRR + +++ A ID + G S++EV+++ T + N
Sbjct: 19 LDTDLDGKRNVADSLCGVNGIGRRIAETLVRSAGIDSKGKMGNLSDDEVERLKTAI-NSA 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ ++P W NR+KDI G I+ T A K R+D+ L+KIR++RG+RH GL+VR
Sbjct: 78 EKRLPQWMFNRRKDINTGVDKHIMGTDLAL---KFRDDINLLRKIRSYRGIRHERGLKVR 134
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK TGRRG VGV +KK
Sbjct: 135 GQRTKATGRRGMVVGVIRKK 154
>gi|212223248|ref|YP_002306484.1| 30S ribosomal protein S13 [Thermococcus onnurineus NA1]
gi|212008205|gb|ACJ15587.1| SSU ribosomal protein S13P [Thermococcus onnurineus NA1]
Length = 149
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALT IKG G F+ +VL+ A ID + G ++E+V KI I+ +P
Sbjct: 13 GVDLDGNKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKKIEEILEDPVA 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD GK ++ TA+L RED+ RL++IRA+RG+RH GL +RG
Sbjct: 73 HGIPTWAVNRPKDYETGKDMHLI---TAKLVMAWREDINRLRRIRAYRGIRHELGLPLRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ R G TVGV ++K
Sbjct: 130 QRTRSNFRHGTTVGVRRRK 148
>gi|435852107|ref|YP_007313693.1| archaeal ribosomal protein S13P [Methanomethylovorans hollandica
DSM 15978]
gi|433662737|gb|AGB50163.1| archaeal ribosomal protein S13P [Methanomethylovorans hollandica
DSM 15978]
Length = 148
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G V +ALT I G GRR S I+++ ID G +E++ K+ ++
Sbjct: 13 MNTDLKGGMPVEYALTGIPGIGRRTSRILVESTGIDPLAIIGYLQDEDIAKLDQAISGFE 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q +P W LNRQ+D+V G+ +L + LREDL LKKIR +RG+RH GL+VR
Sbjct: 73 Q-SMPIWMLNRQRDLVTGEDKHLL---GQDILLTLREDLNTLKKIRCYRGIRHERGLKVR 128
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG T+GVSKKK
Sbjct: 129 GQRTKSTGRRGSTIGVSKKK 148
>gi|336477131|ref|YP_004616272.1| 30S ribosomal protein S13 [Methanosalsum zhilinae DSM 4017]
gi|335930512|gb|AEH61053.1| ribosomal protein S13P [Methanosalsum zhilinae DSM 4017]
Length = 148
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G + V +ALT I+G GRR + I+ + A +D G S+E+V K+ + +
Sbjct: 13 MNTDLQGDQPVQYALTGIRGIGRRTARILTECAGVDPTVMIGYLSDEDVQKLNKTINDFE 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q IP W LNRQKD V G +L + +RED+ LKK+RA+RG+RH GL+VR
Sbjct: 73 Q-NIPPWMLNRQKDPVTGDDKHLL---GQDIILTVREDINTLKKVRAYRGIRHERGLKVR 128
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGR TVGVSKKK
Sbjct: 129 GQRTKSTGRGSTTVGVSKKK 148
>gi|170291190|ref|YP_001738006.1| 30S ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8]
gi|170175270|gb|ACB08323.1| ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 149
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++T +DG + V+ ALT ++G + +L+KA I N+ GE S+EE KI ++ NP
Sbjct: 13 LNTTLDGTKPVIVALTGVRGISHTLALTILRKAGIHPNRLLGELSDEEYAKIEDVVNNPH 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+Y +P W +NRQKD + + S+IL+ ++ + +D+ +KKI + +G+RH GL+VR
Sbjct: 73 KYGVPWWLMNRQKDYRNNE-SRILIGD--DVNWYMTQDINLMKKIGSWKGIRHELGLKVR 129
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TKTTGR G+TVG +KK
Sbjct: 130 GQRTKTTGRVGKTVGYQRKK 149
>gi|329765794|ref|ZP_08257360.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137637|gb|EGG41907.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 192
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I G RK + LT IKG G F+ +L I+ N G SE +V I ++TNP
Sbjct: 13 VGNDIPGARKAIVGLTQIKGIGYNFATAILDTLKINTNTNIGFLSESDVQSIEKLITNPI 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
P WFLNR+KDI G +L T+ + LR D+ER + + RG RH +GL+VR
Sbjct: 73 AGNFPPWFLNRRKDIETGSNMHLL---TSDIPFTLRNDIERERITNSWRGYRHMYGLKVR 129
Query: 121 GQHTKTTGRRGRTVGVSK 138
GQ T+TTGR+G VGV+K
Sbjct: 130 GQCTRTTGRKGGAVGVAK 147
>gi|223477914|ref|YP_002582355.1| 30S ribosomal protein S13 [Thermococcus sp. AM4]
gi|214033140|gb|EEB73968.1| SSU ribosomal protein S18e (S13p) [Thermococcus sp. AM4]
Length = 149
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALT IKG G F+ +VL+ A ID + G ++E+V I I+ +P
Sbjct: 13 GVDLDGHKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKLIEKILEDPVA 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD GK ++ TA+L RED+ RL++IRA+RG+RH GL +RG
Sbjct: 73 HGIPAWAVNRPKDYETGKDMHLI---TAKLVMAWREDVNRLRRIRAYRGIRHELGLPLRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ R G TVGVS++K
Sbjct: 130 QRTRSNFRHGTTVGVSRRK 148
>gi|386001509|ref|YP_005919808.1| 30S ribosomal protein S13 [Methanosaeta harundinacea 6Ac]
gi|357209565|gb|AET64185.1| 30S ribosomal protein S13P [Methanosaeta harundinacea 6Ac]
Length = 151
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T+++G + V ALT I G GRR + ++ +KA+I+ + G+ S+E + ++ I+ + +
Sbjct: 15 MNTDLNGHQPVQMALTGITGMGRRNARLLAQKAEIEPTETLGKLSDEAISRLREIVESAQ 74
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++ +P W NR+KD++ G+ ++ T L LRE+++ ++K R++RG+RH GLRVR
Sbjct: 75 EH-LPVWMKNRRKDLLTGEDRHVMGTD---LVMALREEMDIIRKTRSYRGIRHERGLRVR 130
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ T++TGRRG TVGVS+KK
Sbjct: 131 GQKTRSTGRRGATVGVSRKK 150
>gi|91772118|ref|YP_564810.1| 30S ribosomal protein S13P [Methanococcoides burtonii DSM 6242]
gi|121684548|sp|Q12ZR6.1|RS13_METBU RecName: Full=30S ribosomal protein S13
gi|91711133|gb|ABE51060.1| SSU ribosomal protein S13P [Methanococcoides burtonii DSM 6242]
Length = 148
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ GK+ V +ALT I+G G R S +++ ID N G S+E++ K+ + + +
Sbjct: 13 MNTDLQGKKPVKYALTGIRGIGLRTSRVIVDSTGIDPNAVIGYLSDEDIKKLDSTI-DKF 71
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ ++P W LNRQ D + G+ +L + L+EDL LKK RA+RG+RH GL+VR
Sbjct: 72 EEQLPKWMLNRQFDPLTGENKHLL---GQDIILTLKEDLNDLKKSRAYRGLRHERGLKVR 128
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG T+GV KKK
Sbjct: 129 GQRTKSTGRRGSTIGVRKKK 148
>gi|262401179|gb|ACY66492.1| 40S ribosomal protein S18 [Scylla paramamosain]
Length = 77
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 58/62 (93%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG+RKVMFA+TAIKG GRR+SNIVLKKADID KRAGE +EEEV+KI+TIM+NPR
Sbjct: 16 MNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQTKRAGELTEEEVEKIVTIMSNPR 75
Query: 61 QY 62
QY
Sbjct: 76 QY 77
>gi|147919301|ref|YP_686963.1| 30S ribosomal protein S13P [Methanocella arvoryzae MRE50]
gi|121690302|sp|Q0W1V6.1|RS13_UNCMA RecName: Full=30S ribosomal protein S13
gi|110622359|emb|CAJ37637.1| putative 30S ribosomal protein S13P [Methanocella arvoryzae MRE50]
Length = 224
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V FALT IKG G R S I+ ++A +D + G E+VDK+ ++ N +
Sbjct: 77 NTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVIDN-LE 135
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+P W LNR++DI G+ + L ++ED+ +KKIR+++G+RH G +VRG
Sbjct: 136 ANVPVWMLNRRRDIYTGEDKHLY---GVDLTMAVKEDINIMKKIRSYKGIRHERGQKVRG 192
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+TGR G TVGV +KK
Sbjct: 193 QRTKSTGRTGATVGVVRKK 211
>gi|410670319|ref|YP_006922690.1| 30S ribosomal protein S13P [Methanolobus psychrophilus R15]
gi|409169447|gb|AFV23322.1| 30S ribosomal protein S13P [Methanolobus psychrophilus R15]
Length = 148
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G R VM+ALT I+G G R + I++ ID G +E+V K+
Sbjct: 13 MNTDLKGSRSVMYALTGIRGIGLRTARIIVDGTGIDPKGVIGYLPDEDVAKL-DAAVGEF 71
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ K+P W LNR+ D + G+ +L + RED+ LKK+RA+RG+RH GL+VR
Sbjct: 72 EKKMPTWMLNRRLDPLSGEDKHLL---GQDILLTFREDINNLKKVRAYRGLRHERGLKVR 128
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK+TGRRG T+GVSKKK
Sbjct: 129 GQRTKSTGRRGSTIGVSKKK 148
>gi|340344193|ref|ZP_08667325.1| Ribosomal protein S13 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519334|gb|EGP93057.1| Ribosomal protein S13 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 185
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M +I G +K + LT IKG G F+ +L I+ N G SE V+ I ++TNP
Sbjct: 1 MGNDIPGAKKAIVGLTQIKGIGYNFATAILDTLKINTNTNIGFLSEANVESIEKLITNPI 60
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
P WFLNR+KDI G +L T+ + LR D+ER + + RG RH +GL+VR
Sbjct: 61 AGNFPAWFLNRRKDIETGANMHLL---TSDIPFTLRNDIERERITNSWRGYRHMYGLKVR 117
Query: 121 GQHTKTTGRRGRTVGV 136
GQ T+TTGR+G VGV
Sbjct: 118 GQCTRTTGRKGGAVGV 133
>gi|375083508|ref|ZP_09730528.1| 30S ribosomal protein S13P [Thermococcus litoralis DSM 5473]
gi|374741835|gb|EHR78253.1| 30S ribosomal protein S13P [Thermococcus litoralis DSM 5473]
Length = 148
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+ +IDG +++ +ALT I+G G F+ +V + A +D +AG ++E+V I ++ +P +
Sbjct: 12 NVDIDGHKQLRWALTGIRGIGINFATMVCRVAGLDPKMKAGYLTDEQVKAIEAVLEDPVK 71
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD G+ L + A+L RED+ RL++IRA+RG+RH GL +RG
Sbjct: 72 HGIPAWAVNRPKDYETGRD---LHLTGAKLVMAWREDVNRLRRIRAYRGIRHELGLPLRG 128
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ RRG TVGVS++K
Sbjct: 129 QRTRSNFRRGTTVGVSRRK 147
>gi|288560162|ref|YP_003423648.1| 30S ribosomal protein S13 [Methanobrevibacter ruminantium M1]
gi|288542872|gb|ADC46756.1| ribosomal protein S13P Rps13p [Methanobrevibacter ruminantium M1]
Length = 149
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 82/137 (59%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + + ALT IKG G S + ++ + G SE++V KI ++ NP+ Y
Sbjct: 15 DVDGNKTIEQALTQIKGVGLSLSRSICLTLGLNTTDKIGYISEDDVTKIEDLLENPQNYS 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IPDW LNR+KD G ++ + LD LR+DL R+KK R+++G RH GL VRGQ
Sbjct: 75 IPDWMLNRRKDYATGDDLHLI---ESDLDMTLRDDLNRMKKTRSYKGRRHEVGLPVRGQR 131
Query: 124 TKTTGRRGRTVGVSKKK 140
TK+T R TVGVS+ +
Sbjct: 132 TKSTFRHSSTVGVSRSR 148
>gi|315229892|ref|YP_004070328.1| 30S ribosomal protein S13 [Thermococcus barophilus MP]
gi|315182920|gb|ADT83105.1| SSU ribosomal protein S18e (S13p) [Thermococcus barophilus MP]
Length = 148
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG +++ +ALT IKG G F+ +V + A +D ++AG ++E+V I I+ +P +
Sbjct: 12 GVDLDGNKQLRWALTGIKGIGINFATMVCRVAGLDPFQKAGYLTDEQVKLIEEILEDPVK 71
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W +NR KD G+ ++ A+L RED+ RL++IRA+RG+RH GL +RG
Sbjct: 72 HGIPPWAVNRPKDYETGRDMHLI---GAKLVMAWREDINRLRRIRAYRGIRHELGLPLRG 128
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ RRG TVGV +KK
Sbjct: 129 QRTRSNFRRGTTVGVRRKK 147
>gi|315425850|dbj|BAJ47503.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum
subterraneum]
gi|315427708|dbj|BAJ49304.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum
subterraneum]
gi|343484665|dbj|BAJ50319.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum
subterraneum]
Length = 161
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 89/139 (64%), Gaps = 3/139 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++T++DG ++ +AL +KG G + + A ID R G +E++++KI I NP
Sbjct: 12 LNTDVDGTLRLPYALARVKGIGVNLGYAIARAAGIDPATRLGNLTEKQIEKIEQIARNPT 71
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++ IP W LNR+ D V G+ + + A L+ ++ED++ + + ++ +G+RH GL+VR
Sbjct: 72 RFGIPAWLLNRRFDPVTGEDRHL---TGADLELAIKEDIQTMMRTKSWKGIRHSLGLKVR 128
Query: 121 GQHTKTTGRRGRTVGVSKK 139
GQ T+TTGR+G TVGVS+K
Sbjct: 129 GQRTRTTGRKGMTVGVSRK 147
>gi|429964415|gb|ELA46413.1| hypothetical protein VCUG_02091 [Vavraia culicis 'floridensis']
Length = 154
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG+R+++ ALT IKG G RF+ +L + I N RAGE + EE +++ + +P+
Sbjct: 20 NTNIDGRRQILKALTTIKGIGMRFARTLLTRTQIR-NCRAGELTAEEQQRLVDAIQDPKS 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP W N +K+ G+ ++ Q+D+ R LER KKI+A R R G++VRG
Sbjct: 79 VGIPIWMYNYRKEYTTGEDKHLV---GNQIDAAFRFSLERGKKIKAVRECRLARGMKVRG 135
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+ GR GR VGVS+KK
Sbjct: 136 QRTKSNGRHGRIVGVSRKK 154
>gi|238597051|ref|XP_002394222.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553]
gi|215462901|gb|EEB95152.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553]
Length = 79
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 68/84 (80%), Gaps = 6/84 (7%)
Query: 57 TNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWG 116
TNP + + +K+IVDGK QIL T+ +DSKLR+DLERLKKIRAHRG+RH+WG
Sbjct: 1 TNPSKSPL---VPPARKNIVDGKDYQILSTN---VDSKLRDDLERLKKIRAHRGLRHFWG 54
Query: 117 LRVRGQHTKTTGRRGRTVGVSKKK 140
LRVRGQHTKTTGRRG+TVGVSKK+
Sbjct: 55 LRVRGQHTKTTGRRGKTVGVSKKR 78
>gi|312137106|ref|YP_004004443.1| 30S ribosomal protein S13 [Methanothermus fervidus DSM 2088]
gi|311224825|gb|ADP77681.1| SSU ribosomal protein S13P [Methanothermus fervidus DSM 2088]
Length = 148
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V A+T IKG G+ + + + K+ G S+EE++K+ + NP Y
Sbjct: 15 DLDGNKNVEEAITGIKGIGKALGKAIARVTGFE-GKKIGYLSDEELEKLEDAIENPGNYG 73
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IP W NR+KD G+ ++ A L+ +RED+ RLK+IR++RG+RH GL VRGQ
Sbjct: 74 IPSWMFNRKKDYRTGENKHLI---EADLEMTIREDINRLKRIRSYRGIRHELGLPVRGQR 130
Query: 124 TKTTGRRGRTVGVSKKK 140
TK+T R+G+TVGV +++
Sbjct: 131 TKSTFRKGQTVGVKRRR 147
>gi|383319960|ref|YP_005380801.1| 30S ribosomal protein S13 [Methanocella conradii HZ254]
gi|379321330|gb|AFD00283.1| SSU ribosomal protein S13P [Methanocella conradii HZ254]
Length = 226
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 4/135 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG V +ALT IKG G R S ++ +KA +D N G S E+VD+I ++ N
Sbjct: 74 NTDLDGTSTVQYALTGIKGIGLRVSKVIARKAGVDPNAIMGYLSAEQVDRIKNVVDNI-D 132
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+P W LNR+ DI G+ +L T L ++ED+ +KKIR ++G+RH G +VRG
Sbjct: 133 TSLPAWMLNRRSDIYTGENRHLLGTD---LILGVKEDINLMKKIRCYKGIRHERGQKVRG 189
Query: 122 QHTKTTGRRGRTVGV 136
Q T++TGR G TVGV
Sbjct: 190 QRTRSTGRTGATVGV 204
>gi|124027412|ref|YP_001012732.1| 30S ribosomal protein S13P [Hyperthermus butylicus DSM 5456]
gi|158706239|sp|A2BK76.1|RS13_HYPBU RecName: Full=30S ribosomal protein S13
gi|123978106|gb|ABM80387.1| 30S ribosomal protein S13p [Hyperthermus butylicus DSM 5456]
Length = 151
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ T+I G KV + L +KG G + + + ID NKR G ++ E++KI M NP
Sbjct: 14 LGTDIPGDLKVPYGLALVKGIGVNLAYALCRLLGIDPNKRIGFLTDAEIEKIEKAMANPL 73
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
IP W LNR+KD GK ++ A L ++ D+ER K+IR+ RG+RH GL+VR
Sbjct: 74 AIGIPVWMLNRRKDYETGKDLHLV---GADLIYYVKRDIEREKRIRSWRGIRHALGLKVR 130
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ T TTGR G T+GV K K
Sbjct: 131 GQRTATTGRIGMTIGVRKGK 150
>gi|440491609|gb|ELQ74233.1| Ribosomal protein S18 [Trachipleistophora hominis]
Length = 154
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG+++++ ALT IKG G RF+ +L + I N RAGE + EE +++ + +P+
Sbjct: 20 NTNIDGRKQILKALTTIKGIGMRFAQTLLTRTQIR-NCRAGELTAEEQQRLVDAIQDPKS 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP W N +K+ G+ ++ Q+D+ R LER KKI+A R R G++VRG
Sbjct: 79 VGIPIWMYNYRKEYTTGEDKHLV---GNQIDAAFRFSLERGKKIKAVRECRLARGMKVRG 135
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+ GR GR VGVS+KK
Sbjct: 136 QRTKSNGRHGRIVGVSRKK 154
>gi|148643485|ref|YP_001273998.1| 30S ribosomal protein S13P [Methanobrevibacter smithii ATCC 35061]
gi|222445016|ref|ZP_03607531.1| hypothetical protein METSMIALI_00632 [Methanobrevibacter smithii
DSM 2375]
gi|261350414|ref|ZP_05975831.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374]
gi|158706442|sp|A5UN52.1|RS13_METS3 RecName: Full=30S ribosomal protein S13
gi|148552502|gb|ABQ87630.1| ribosomal protein S13p [Methanobrevibacter smithii ATCC 35061]
gi|222434581|gb|EEE41746.1| archaeal ribosomal protein S13P [Methanobrevibacter smithii DSM
2375]
gi|288861197|gb|EFC93495.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374]
Length = 147
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + + ALT IKG G S + + D+D + G ++E+V KI I+ NP+++
Sbjct: 15 DVDGNKTIEQALTEIKGVGISLSTTMCRTLDLDSEAQIGYIADEDVLKIEEILENPQKFN 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IP+W LNR++D G+ ++ + LD LR+DL R+KK R+++G RH GL VRGQ
Sbjct: 75 IPNWMLNRREDYETGENIHLI---ESDLDMTLRDDLNRMKKTRSYKGRRHEAGLPVRGQR 131
Query: 124 TKTTGRRGRTVGVSK 138
TK+T R +VGV +
Sbjct: 132 TKSTFRNSSSVGVKR 146
>gi|269862378|ref|XP_002650814.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
gi|269862740|ref|XP_002650957.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
gi|269864585|ref|XP_002651624.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
gi|220064177|gb|EED42431.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
gi|220065356|gb|EED43099.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
gi|220065576|gb|EED43243.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
Length = 161
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG +K++FALT I+G G RF+ + +A +D +K AGE S EE+ I ++ P +
Sbjct: 26 NTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVIDEPLK 85
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y IP++FLN QKD V G+ ++ +LD LR +E+ KK + RG R GL+ G
Sbjct: 86 YSIPEYFLNHQKDSVTGEDEHLV---GIKLDGDLRMLIEKAKKFKEIRGCRLAMGLKCNG 142
Query: 122 QHTKTTGR 129
Q T++ GR
Sbjct: 143 QRTRSNGR 150
>gi|25553586|dbj|BAC24851.1| ribosomal protein S18-like [Oryza sativa Japonica Group]
gi|50509336|dbj|BAD30794.1| ribosomal protein S18-like [Oryza sativa Japonica Group]
Length = 145
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%), Gaps = 3/71 (4%)
Query: 70 NRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
++KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWGLRVRGQHTKTTGR
Sbjct: 78 QQKKDYKDGRFSQVVSNA---LDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGR 134
Query: 130 RGRTVGVSKKK 140
RG+TVGVSKK+
Sbjct: 135 RGKTVGVSKKR 145
>gi|395645097|ref|ZP_10432957.1| ribosomal protein S13P [Methanofollis liminatans DSM 4140]
gi|395441837|gb|EJG06594.1| ribosomal protein S13P [Methanofollis liminatans DSM 4140]
Length = 150
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG ++V ALT I G GR + I+ ++A ++ + G+ S+EE+++I + N +
Sbjct: 16 TDLDGTKQVQIALTGITGVGRHAAKIIAEQASVNSHAILGKMSDEEIERIRAAVENYAE- 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W LNR DI GK +L +++ L ED+ ++K+R++ G+RH G +VRGQ
Sbjct: 75 SVPTWMLNRPIDIYSGKSRHLL---ASEVPMTLDEDINIMRKVRSYSGIRHETGQKVRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
TK+TGR G TVGV +KK
Sbjct: 132 RTKSTGRTGTTVGVKRKK 149
>gi|408404791|ref|YP_006862774.1| 30S ribosomal protein S13p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|300521596|gb|ADK26009.1| r-protein S13p [Candidatus Nitrososphaera gargensis]
gi|408365387|gb|AFU59117.1| 30S ribosomal protein S13p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 215
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+I+G +KV+ A++ IKG G F+ ++ + +I+ +KR G ++ E+ ++ + +P +
Sbjct: 18 DIEGSKKVIVAVSEIKGIGYNFAQVLTQTLNINPDKRVGFLTDSELGELEQAIAHPDKAG 77
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W+LNR+K++ G ++ T+ LD D+ER K + + RG RH +GLRVRGQ
Sbjct: 78 VPAWYLNRRKNMDTGSNHHMI---TSDLDFASSNDIEREKMVMSWRGYRHMFGLRVRGQR 134
Query: 124 TKTTGRRGRTVGVSKKK 140
T+TTGR+G VGV K K
Sbjct: 135 TRTTGRKGGAVGVKKVK 151
>gi|333987648|ref|YP_004520255.1| 30S ribosomal protein S13P [Methanobacterium sp. SWAN-1]
gi|333825792|gb|AEG18454.1| ribosomal protein S13P [Methanobacterium sp. SWAN-1]
Length = 155
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + + AL IKG GR S + K A D ++ G S+ EV ++ + +P++Y
Sbjct: 15 DVDGNKTIENALADIKGVGRALSMAICKTAGFDAEQKIGFLSDAEVVRVEEAVKDPQKYN 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IP+W LNR+ D G+ ++ + L LR+DL R+KKIR+++G RH GL VRGQ
Sbjct: 75 IPEWMLNRRNDYETGETVHLI---ESDLVMSLRDDLNRMKKIRSYKGKRHEVGLPVRGQR 131
Query: 124 TKTTGRRGRTVGVSKKK 140
TK+T R+G +VGV +++
Sbjct: 132 TKSTFRKGSSVGVRRRR 148
>gi|13541393|ref|NP_111081.1| 30S ribosomal protein S13P [Thermoplasma volcanium GSS1]
gi|32363380|sp|Q97B96.1|RS13_THEVO RecName: Full=30S ribosomal protein S13
gi|14324776|dbj|BAB59703.1| ribosomal protein small subunit S18 [Thermoplasma volcanium GSS1]
Length = 171
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 92/139 (66%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+ +++G+R + AL+ +KG G R + ++ ++ K+ GE E+E++K+ + N ++
Sbjct: 36 NKDLNGERPIPLALSDLKGIGLRLGYAIAERLNLQPTKKIGELKEDEIEKLKEYVEN-KE 94
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y +PDW LN +++ V GK ++ T LD +++ED+ +KKIR+++G+RH G +VRG
Sbjct: 95 YDLPDWLLNHRREPVTGKNLNLV---TTDLDVQVQEDINLMKKIRSYKGIRHEKGKKVRG 151
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ GRRG ++GV +KK
Sbjct: 152 QRTRSNGRRGLSIGVVRKK 170
>gi|20094907|ref|NP_614754.1| 30S ribosomal protein S13 [Methanopyrus kandleri AV19]
gi|32363353|sp|Q8TVC1.1|RS13_METKA RecName: Full=30S ribosomal protein S13
gi|19888143|gb|AAM02684.1| Ribosomal protein S13 [Methanopyrus kandleri AV19]
Length = 151
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 93/140 (66%), Gaps = 5/140 (3%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIM--TNPR 60
++DG +KV +ALT IKG G R + + ++ +D K+ GE S+EE+++I + +
Sbjct: 15 VDLDGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEEEIKKLSEG 74
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ IP W NRQKD G+ ++ A+L+ +++D++RLKKIRA+RG+RH GL VR
Sbjct: 75 ESNIPSWMYNRQKDYETGEDMHLV---GAELEMTVKQDIDRLKKIRAYRGIRHELGLPVR 131
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK++ RRGRTVGV KK+
Sbjct: 132 GQRTKSSFRRGRTVGVKKKQ 151
>gi|385805511|ref|YP_005841909.1| 30S ribosomal protein S13 [Fervidicoccus fontis Kam940]
gi|383795374|gb|AFH42457.1| 30S ribosomal protein S13P [Fervidicoccus fontis Kam940]
Length = 164
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 88/139 (63%), Gaps = 4/139 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG++K+ + L IKG G + +L+ +ID KR G S+EE+ +I ++
Sbjct: 17 TDLDGRKKLAYGLAGIKGIGYTTAVCLLRMLNIDPEKRTGFLSDEEISRIEKAISEISAS 76
Query: 63 KI-PDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ P W LNR+KD G ++ ++L K+++D+ER KKI++ RG+RH GL+VRG
Sbjct: 77 NLLPKWMLNRRKDYETGDDIHLI---GSELIFKVKQDIEREKKIKSWRGIRHSLGLKVRG 133
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T TTGR G TVGVSKKK
Sbjct: 134 QRTHTTGRLGVTVGVSKKK 152
>gi|282164925|ref|YP_003357310.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE]
gi|282157239|dbj|BAI62327.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE]
Length = 225
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 88/139 (63%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG KV++ALT IKG G R S ++ +KA++D N G E+VD++ + N
Sbjct: 76 NTDLDGTSKVLYALTGIKGIGIRVSKMLARKAEVDPNAIMGYLPPEQVDRLRNALEN-ID 134
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+P W LNR+ D G+ LT T + S +ED+ +KKIR+++G+RH G +VRG
Sbjct: 135 TNMPVWMLNRRNDTYTGENRH--LTGTDLILSN-KEDINLMKKIRSYKGIRHERGQKVRG 191
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++TGR G TVGV +KK
Sbjct: 192 QRTRSTGRTGATVGVVRKK 210
>gi|2129263|pir||F64323 ribosomal protein S18 - Methanococcus jannaschii
Length = 186
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 89/138 (64%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG +K++ AL I G G + +++ A +D NK AG +EEEV KI ++ +P ++
Sbjct: 51 TDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLADPAKF 110
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD V G+ ++ + + +ED+ RLK+IR +RG+RH GL RGQ
Sbjct: 111 GIPSWMFNRRKDYVTGEDKHVIESDLMIIK---QEDINRLKRIRCYRGIRHELGLPCRGQ 167
Query: 123 HTKTTGRRGRTVGVSKKK 140
TK+T RRG TVGVS++K
Sbjct: 168 RTKSTFRRGPTVGVSRRK 185
>gi|307352909|ref|YP_003893960.1| 30S ribosomal protein S13P [Methanoplanus petrolearius DSM 11571]
gi|307156142|gb|ADN35522.1| ribosomal protein S13P [Methanoplanus petrolearius DSM 11571]
Length = 148
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V ALT + G G S + + A +D G E+ VD+I +++ +
Sbjct: 14 NTDLDGTKSVQVALTGLAGIGMHTSVSIAQMAGVDPRATLGLLEEDVVDRIREVVSGYTE 73
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
K+P W LNRQKD+ G+ Q+L T L + +D+ R++KIR +RG+RH +VRG
Sbjct: 74 -KVPAWMLNRQKDVYTGEAKQLLGTD---LRMAVDDDVNRMRKIRCYRGIRHETHQKVRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+TGR G TVGVSKKK
Sbjct: 130 QRTKSTGRHGATVGVSKKK 148
>gi|261403748|ref|YP_003247972.1| 30S ribosomal protein S13 [Methanocaldococcus vulcanius M7]
gi|261370741|gb|ACX73490.1| ribosomal protein S13P [Methanocaldococcus vulcanius M7]
Length = 154
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 89/138 (64%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+IDG +K++ AL I G G + +++ A +D +K AG +EEE+ KI ++ +P ++
Sbjct: 19 TDIDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTEEEIKKIEEVLIDPAKF 78
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD + G+ ++ + + +ED+ RLK+IR +RG+RH GL RGQ
Sbjct: 79 GIPSWMFNRRKDYITGEDKHVIESDLMIIK---QEDINRLKRIRCYRGIRHELGLPCRGQ 135
Query: 123 HTKTTGRRGRTVGVSKKK 140
TK+T RRG TVGVS++K
Sbjct: 136 RTKSTFRRGPTVGVSRRK 153
>gi|355570773|ref|ZP_09042043.1| ribosomal protein S13P [Methanolinea tarda NOBI-1]
gi|354826055|gb|EHF10271.1| ribosomal protein S13P [Methanolinea tarda NOBI-1]
Length = 150
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 89/139 (64%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V ALT IKG GR + ++ + A ++ + G+ SE +VDK+ ++ +
Sbjct: 15 NTDLDGTKPVTTALTGIKGVGRHTALVIAQMAGVNPRELMGKLSEADVDKLREVVET-YE 73
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
K+P W +NR KDI G+ + T ++ + L ED+ ++KIR+++G+RH G +VRG
Sbjct: 74 KKVPAWMVNRPKDIYTGEPRHLFGT---EVVTTLDEDINLMRKIRSYKGIRHETGQKVRG 130
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+TGR G TVGV +KK
Sbjct: 131 QRTKSTGRTGATVGVKRKK 149
>gi|15668361|ref|NP_247157.1| 30S ribosomal protein S13 [Methanocaldococcus jannaschii DSM 2661]
gi|3334492|sp|P54019.2|RS13_METJA RecName: Full=30S ribosomal protein S13
gi|2826258|gb|AAB98169.1| SSU ribosomal protein S13P (rpsM) [Methanocaldococcus jannaschii
DSM 2661]
Length = 150
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 89/138 (64%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG +K++ AL I G G + +++ A +D NK AG +EEEV KI ++ +P ++
Sbjct: 15 TDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLADPAKF 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD V G+ ++ + + +ED+ RLK+IR +RG+RH GL RGQ
Sbjct: 75 GIPSWMFNRRKDYVTGEDKHVIESDLMIIK---QEDINRLKRIRCYRGIRHELGLPCRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
TK+T RRG TVGVS++K
Sbjct: 132 RTKSTFRRGPTVGVSRRK 149
>gi|161527833|ref|YP_001581659.1| 30S ribosomal protein S13 [Nitrosopumilus maritimus SCM1]
gi|160339134|gb|ABX12221.1| ribosomal protein S13 [Nitrosopumilus maritimus SCM1]
Length = 194
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I G+RK++ LT IKG G F+ +L +ID N G ++E V I ++TNP
Sbjct: 16 VGNDIPGERKMLVGLTQIKGIGYNFATAILDTLNIDSNSNIGHLTDENVQAIEKLITNPA 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ P WFLNR+KDI G +L T+ + LR D+ER + + RG RH GL+VR
Sbjct: 76 EGNFPTWFLNRRKDIETGNDLHLL---TSDIPFTLRNDIERERVTASWRGYRHLSGLKVR 132
Query: 121 GQHTKTTGR 129
GQ T+T+GR
Sbjct: 133 GQRTRTSGR 141
>gi|167044121|gb|ABZ08804.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote
HF4000_APKG5C13]
Length = 208
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I G+RK++ LT I+G G F+N +L I+ N+R G S E+V I +I+ NP
Sbjct: 12 VGNDIPGERKMIVGLTQIRGVGYMFANTILNLLKINPNQRIGYLSLEQVKSIESIIKNPS 71
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
P WFLNR+KD+ G+ ++ T+ + +R D+ER K + RG+RH +GL+VR
Sbjct: 72 ASNFPSWFLNRRKDVETGEDKHLI---TSDIAFTVRNDIEREKTSGSWRGIRHMFGLKVR 128
Query: 121 GQHTKTTGR 129
GQ T+ TGR
Sbjct: 129 GQRTRCTGR 137
>gi|448592475|ref|ZP_21651582.1| 30S ribosomal protein S13P [Haloferax elongans ATCC BAA-1513]
gi|445731480|gb|ELZ83064.1| 30S ribosomal protein S13P [Haloferax elongans ATCC BAA-1513]
Length = 167
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 87/135 (64%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R + I+ AD+D G+ E+E+D ++ ++ N ++
Sbjct: 26 TDLDGTKTVERSLTDMKGIGKRTARIIADAADVDRTALFGKLPEDEIDSVVDVVQNFEEH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P+W +NRQ+D G+ + I + + L+ K R D+ R+K + +++G+RH G +VRGQ
Sbjct: 86 -VPEWMVNRQRDFYSGETAHI---TGSDLEEKRRHDINRMKMVSSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|126179743|ref|YP_001047708.1| 30S ribosomal protein S13 [Methanoculleus marisnigri JR1]
gi|158706247|sp|A3CWH6.1|RS13_METMJ RecName: Full=30S ribosomal protein S13
gi|125862537|gb|ABN57726.1| SSU ribosomal protein S13P [Methanoculleus marisnigri JR1]
Length = 149
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V ALT IKG G S + A +D + G+ +E V +I + +
Sbjct: 14 NTDLDGTKAVHIALTGIKGIGPHTSRTITALAAVDPHAILGKLDDESVGRIANAVDTYTE 73
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
++PDW +NRQKD+ G+ +L T ++ +D+ R++K+R++RG+RH G +VRG
Sbjct: 74 -QVPDWMVNRQKDVYTGEVRHLLGTDLTMMND---DDVNRMRKMRSYRGIRHETGQKVRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+TGR G TVGV +KK
Sbjct: 130 QRTKSTGRTGTTVGVKRKK 148
>gi|407461828|ref|YP_006773145.1| 30S ribosomal protein S13 [Candidatus Nitrosopumilus koreensis AR1]
gi|407045450|gb|AFS80203.1| 30S ribosomal protein S13P [Candidatus Nitrosopumilus koreensis
AR1]
Length = 190
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I G+RK++ LT IKG G F+ +L ID N G SEE V I +++NP
Sbjct: 13 VGNDIPGERKMLVGLTQIKGIGYNFATAILDTLKIDSNSNIGHLSEENVQAIEKLISNPI 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ P WFLNR+KDI G +L T+ + LR D+ER + + RG RH GL+VR
Sbjct: 73 EGNFPAWFLNRRKDIETGTNLHLL---TSDIPFTLRNDIERERITASWRGYRHLSGLKVR 129
Query: 121 GQHTKTTGR 129
GQ T+T+GR
Sbjct: 130 GQRTRTSGR 138
>gi|167042197|gb|ABZ06929.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote
HF4000_ANIW93I24]
Length = 180
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 78/128 (60%), Gaps = 3/128 (2%)
Query: 11 VMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLN 70
++ LT I+G G F+N ++ I+ N+R G S E+V I +I+ NP P WFLN
Sbjct: 1 MVVGLTKIRGVGYMFANTIINVLKINPNQRIGYLSPEQVKSIESIIKNPSASNFPSWFLN 60
Query: 71 RQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRR 130
R+KDI G+ ++ T+ + +R D+ER K + RG+RH +GL+VRGQ T+ TGR+
Sbjct: 61 RRKDIETGEDKHLI---TSDIAFTVRNDIEREKTSGSWRGIRHMFGLKVRGQRTRCTGRK 117
Query: 131 GRTVGVSK 138
G V V+K
Sbjct: 118 GGAVSVAK 125
>gi|289191583|ref|YP_003457524.1| 30S ribosomal protein S13 [Methanocaldococcus sp. FS406-22]
gi|288938033|gb|ADC68788.1| ribosomal protein S13P [Methanocaldococcus sp. FS406-22]
Length = 150
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 89/138 (64%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG +K++ AL I G G + V++ +D NK AG +EEEV KI ++ +P ++
Sbjct: 15 TDLDGNKKLIMALQDIYGVGEAMARAVIRVTKLDPNKLAGYLTEEEVKKIEEVLADPAKF 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD V G+ ++ + + +ED+ RLK+IR +RG+RH GL RGQ
Sbjct: 75 GIPSWMFNRRKDYVTGEDKHVIESDLMIIK---QEDINRLKRIRCYRGIRHELGLPCRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++T RRG+TVGVS++K
Sbjct: 132 RTRSTFRRGQTVGVSRRK 149
>gi|11499866|ref|NP_071110.1| 30S ribosomal protein S13P [Archaeoglobus fulgidus DSM 4304]
gi|6226060|sp|O27999.1|RS13_ARCFU RecName: Full=30S ribosomal protein S13
gi|2648238|gb|AAB88972.1| SSU ribosomal protein S13P (rps13P) [Archaeoglobus fulgidus DSM
4304]
Length = 146
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + +MFALT IKG G R + ++ + +D + GE +E ++K+ + +
Sbjct: 12 TDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVKKFVEEEIE- 70
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W LNR+KD G+ +L + +D D+ERL K++A+RG+RH G +VRGQ
Sbjct: 71 SLPSWLLNRRKDPYSGQDLHLL---SKDVDFARMLDIERLIKMKAYRGVRHARGKKVRGQ 127
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++TGR+GRTVGV ++K
Sbjct: 128 RTRSTGRKGRTVGVVRRK 145
>gi|448578453|ref|ZP_21643888.1| 30S ribosomal protein S13P [Haloferax larsenii JCM 13917]
gi|445726994|gb|ELZ78610.1| 30S ribosomal protein S13P [Haloferax larsenii JCM 13917]
Length = 167
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 86/135 (63%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R + I+ AD+D G+ E+E+D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLTDMKGIGKRTARIIADAADVDRTALFGKLPEDEIDSVVDVVQNFEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P+W +NRQ+D G+ + I + + L+ K R D+ R+K + +++G+RH G +VRGQ
Sbjct: 86 -VPEWMVNRQRDFYSGETAHI---TGSDLEEKRRHDINRMKMVSSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|125599287|gb|EAZ38863.1| hypothetical protein OsJ_23280 [Oryza sativa Japonica Group]
Length = 78
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 62/75 (82%), Gaps = 4/75 (5%)
Query: 67 WFL-NRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTK 125
W L R+KD DG++SQ++ + LD KLR+DLERLKKIR HRG+RHYWGLR RGQHTK
Sbjct: 7 WILPERKKDYKDGRFSQVV---SNALDMKLRDDLERLKKIRNHRGLRHYWGLRDRGQHTK 63
Query: 126 TTGRRGRTVGVSKKK 140
TTGRRG+TVGVSKK+
Sbjct: 64 TTGRRGKTVGVSKKR 78
>gi|288931231|ref|YP_003435291.1| 30S ribosomal protein S13 [Ferroglobus placidus DSM 10642]
gi|288893479|gb|ADC65016.1| ribosomal protein S13P [Ferroglobus placidus DSM 10642]
Length = 147
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + ++ ALT IKG G R + + ++ ++ G S+EE++K+ + +
Sbjct: 13 TDLDGNKPLVHALTGIKGIGLRMARAITNHLGLNAREKLGNLSDEEIEKLKKFVEENIE- 71
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P W LNR+KD+ GK LL L KL D+ERL KIRA+RG+RH G +VRGQ
Sbjct: 72 ELPSWMLNRRKDLYTGKDLH-LLGKDVDLAKKL--DIERLIKIRAYRGIRHAKGYKVRGQ 128
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++TGR G+TVGV ++K
Sbjct: 129 RTRSTGRTGQTVGVQRRK 146
>gi|161899393|ref|XP_001712923.1| ribosomal protein S18 [Bigelowiella natans]
gi|75756417|gb|ABA27311.1| ribosomal protein S18 [Bigelowiella natans]
Length = 159
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 81/137 (59%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
NI+G F L IKG G R SN++ K D+N + + ++++++ I +
Sbjct: 25 NINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEEVVNIFGKSSRKA 84
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
P W +NR+ D + G +L T LDS L+ED++RL I+ ++G+RH L+ RGQH
Sbjct: 85 FPSWLMNRRADFLTGDNLHVLSTV---LDSALQEDIKRLVTIKNNKGLRHLSRLKTRGQH 141
Query: 124 TKTTGRRGRTVGVSKKK 140
TK+ GRRG+T+GV +KK
Sbjct: 142 TKSNGRRGKTIGVVRKK 158
>gi|327358557|gb|AEA51125.1| 40S ribosomal protein S18, partial [Oryzias melastigma]
Length = 91
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 58/62 (93%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDLNKRAGE ++EEV++++TIM NPR
Sbjct: 2 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERVVTIMQNPR 61
Query: 61 QY 62
QY
Sbjct: 62 QY 63
>gi|88604135|ref|YP_504313.1| 30S ribosomal protein S13 [Methanospirillum hungatei JF-1]
gi|121721492|sp|Q2FT96.1|RS13_METHJ RecName: Full=30S ribosomal protein S13
gi|88189597|gb|ABD42594.1| SSU ribosomal protein S13P [Methanospirillum hungatei JF-1]
Length = 151
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V+ +LT IKG GR + + + A ++ N G+ E VD+I +++N
Sbjct: 16 NTDLDGTKPVLISLTGIKGVGRHTAKFIAETAGVEKNVLMGKLDEASVDRIREVVSNYAD 75
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+IP W NR KD+ G +L A + + +D+ LKKIRA+RG+RH G +VRG
Sbjct: 76 -RIPVWMSNRPKDVYTGVKRHLL---GADVTMTVDDDINLLKKIRAYRGIRHETGQKVRG 131
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+TGR G VGV +KK
Sbjct: 132 QRTKSTGRTGLIVGVKRKK 150
>gi|16082067|ref|NP_394493.1| 30S ribosomal protein S13P [Thermoplasma acidophilum DSM 1728]
gi|32363410|sp|Q9HJD6.1|RS13_THEAC RecName: Full=30S ribosomal protein S13
gi|10640348|emb|CAC12162.1| probable ribosomal protein S13 [Thermoplasma acidophilum]
Length = 171
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 94/139 (67%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+ +++G+R + AL+ +KG G R ++ ++ D+ ++K+ GE EE+++K+ + ++
Sbjct: 36 NKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYVE-AKE 94
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y +P+W LN +++ V GK ++ T L+ +++ED+ +KKIR+++G+RH G +VRG
Sbjct: 95 YDLPEWLLNHRREPVTGKNLNLVSTD---LEIQVQEDINLMKKIRSYKGIRHEKGKKVRG 151
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ GR+G ++GV +KK
Sbjct: 152 QRTRSNGRKGLSIGVVRKK 170
>gi|219852960|ref|YP_002467392.1| 30S ribosomal protein S13 [Methanosphaerula palustris E1-9c]
gi|219547219|gb|ACL17669.1| ribosomal protein S13 [Methanosphaerula palustris E1-9c]
Length = 151
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V ALT I G GR S I+ ++A ++ ++ G + +VD+I ++T+
Sbjct: 16 NTDLDGTKSVRVALTGIPGVGRHTSGIITRRAAVNEHELLGRLPDGDVDRIRDVVTDYGA 75
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP W NR KD+ G+ IL + A + ED+ L+KIR +RG+RH G +VRG
Sbjct: 76 L-IPAWMRNRIKDVYTGESKHILGSDLAMTND---EDVNLLRKIRCYRGIRHETGQKVRG 131
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+TGR G TVGV +KK
Sbjct: 132 QRTKSTGRTGTTVGVKRKK 150
>gi|325958562|ref|YP_004290028.1| 30S ribosomal protein S13 [Methanobacterium sp. AL-21]
gi|325329994|gb|ADZ09056.1| ribosomal protein S13P [Methanobacterium sp. AL-21]
Length = 149
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 86/137 (62%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DGK+ + AL IKG GR S + + A D + G +++V K+ + P+Q++
Sbjct: 15 DVDGKKTIENALADIKGIGRALSRALCQVAGFDATMQIGYLPDKDVLKLEEAVKAPQQFE 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P+W LNR+ D G+ ++ + L +LR+DL R+KK R+++G RH GL VRGQ
Sbjct: 75 LPEWMLNRRNDYETGETVHLI---ESDLTMRLRDDLNRMKKTRSYKGRRHEVGLPVRGQR 131
Query: 124 TKTTGRRGRTVGVSKKK 140
TK+T R+G++VGV +++
Sbjct: 132 TKSTFRKGKSVGVRRRR 148
>gi|392334306|ref|XP_003753133.1| PREDICTED: 40S ribosomal protein S18-like [Rattus norvegicus]
Length = 107
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 56/63 (88%), Gaps = 3/63 (4%)
Query: 78 GKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVS 137
GK SQ+L S LD+KL EDLERLKKIRAHRG+RH+WGLRVRG+HTKTTGRRGRTVGVS
Sbjct: 48 GKDSQVLANS---LDNKLHEDLERLKKIRAHRGLRHFWGLRVRGRHTKTTGRRGRTVGVS 104
Query: 138 KKK 140
KKK
Sbjct: 105 KKK 107
>gi|336121982|ref|YP_004576757.1| 30S ribosomal protein S13P [Methanothermococcus okinawensis IH1]
gi|334856503|gb|AEH06979.1| ribosomal protein S13P [Methanothermococcus okinawensis IH1]
Length = 168
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+I G+ + +AL IKG G+ + +L+ +D ++AG S+E+V KI ++ +P ++
Sbjct: 34 TDITGEFPLEYALQDIKGIGKAMAKAILRITKLDGKQQAGYLSDEDVQKIEEVLNDPAKH 93
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD G+ ++ T L ++ED+ +KKIR +RG+RH GL RGQ
Sbjct: 94 GIPSWMFNRKKDTYTGEDKHLIETD---LMLTVQEDITTMKKIRCYRGIRHELGLPCRGQ 150
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+ + RRG VGV ++K
Sbjct: 151 RTRGSFRRGSIVGVKRRK 168
>gi|448611955|ref|ZP_21662385.1| 30S ribosomal protein S13P [Haloferax mucosum ATCC BAA-1512]
gi|445742716|gb|ELZ94210.1| 30S ribosomal protein S13P [Haloferax mucosum ATCC BAA-1512]
Length = 166
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R + I+ AD+D G+ E+E+D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLTDMKGIGKRTARIIADAADVDRTALFGKLPEDEIDSVVGVVENFEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P W NRQKD G+ I + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -APTWMANRQKDFFSGETGHI---TGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|257076680|ref|ZP_05571041.1| 30S ribosomal protein S13P [Ferroplasma acidarmanus fer1]
Length = 159
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 88/139 (63%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+ +I G+R++ L I G G R +NI++KK ++D N++ G+ SE+EV +I + +
Sbjct: 19 NKDIRGERRMDLGLADINGVGERLANILIKKLNLDRNRQIGDLSEDEVLEIRKYVESKEY 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+P W LN +KD+ GK +L + L K+ +D+ +KK+R++RG+RH G +VRG
Sbjct: 79 EGMPVWLLNHRKDVATGKNFNLL---SNDLILKINDDINLMKKMRSYRGLRHEQGHKVRG 135
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T++ GR G ++GV +K+
Sbjct: 136 QRTRSNGRHGLSMGVIRKR 154
>gi|70909573|emb|CAJ17223.1| ribosomal protein S18e [Eucinetus sp. APV-2005]
Length = 49
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/49 (97%), Positives = 49/49 (100%)
Query: 92 DSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
DSKLREDLER+KKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 1 DSKLREDLERMKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 49
>gi|150399381|ref|YP_001323148.1| 30S ribosomal protein S13P [Methanococcus vannielii SB]
gi|150012084|gb|ABR54536.1| ribosomal protein S13 [Methanococcus vannielii SB]
Length = 149
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+++GK + +AL +KG GR + +++ ++D ++AG ++E+V KI +++ +P ++
Sbjct: 15 TDLEGKNPLEYALQEVKGIGRAMAKALIRVTELDPKQQAGYLADEDVLKIESVLEDPAKH 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD+ G ++ T L ++ED+ +KKIR +RG+RH L RGQ
Sbjct: 75 GIPSWMFNRKKDVYTGLDKHLIETD---LVLAVQEDIGNMKKIRCYRGIRHELRLPCRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+ + R+G T+GV +KK
Sbjct: 132 RTRGSFRKGSTMGVKRKK 149
>gi|397779752|ref|YP_006544225.1| 30S ribosomal protein S13P [Methanoculleus bourgensis MS2]
gi|396938254|emb|CCJ35509.1| 30S ribosomal protein S13P [Methanoculleus bourgensis MS2]
Length = 149
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V ALT IKG G S + A++D G+ + V+++ + +
Sbjct: 14 NTDLDGTKAVHIALTGIKGIGPHTSRTITALANVDPRAVLGKLDDGSVERLANAV-DAYT 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
++PDW LNR KD+ G+ +L T + +D+ R++K+R++RG+RH G +VRG
Sbjct: 73 EQVPDWMLNRPKDVYTGEARHLLGTDLTMTND---DDVNRMRKMRSYRGIRHETGQKVRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK +GR G TVGVS+KK
Sbjct: 130 QRTKASGRTGTTVGVSRKK 148
>gi|399576716|ref|ZP_10770471.1| hypothetical protein HSB1_25100 [Halogranum salarium B-1]
gi|399238160|gb|EJN59089.1| hypothetical protein HSB1_25100 [Halogranum salarium B-1]
Length = 175
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R S IV A +D + G ++E+D ++ ++ N +
Sbjct: 26 TDLDGTKSVERSLTDMKGIGKRMSRIVADAAGVDRHATFGRLEQDEIDSVVDVVENLEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W +NRQKD G+ + + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -TPEWMVNRQKDFFSGETTHKV---GSDLEQKRRHDINRMKMISSYKGVRHKRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|156936975|ref|YP_001434771.1| 30S ribosomal protein S13 [Ignicoccus hospitalis KIN4/I]
gi|156565959|gb|ABU81364.1| SSU ribosomal protein S13P [Ignicoccus hospitalis KIN4/I]
Length = 152
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+IDG ++ L IKG G + +L+K ID + R G SE + ++ + + Q
Sbjct: 17 TDIDGSLPAVYGLAKIKGIGYTTALAILRKLGIDPHMRLGYLSETRIRELDEKVRDITQL 76
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P W NR+KD GK ++ A L R+D+ER K+I++ RG+RH GL+VRGQ
Sbjct: 77 GFPSWLYNRRKDYTTGKDLHLI---GADLVFYARQDIEREKRIKSWRGLRHSLGLKVRGQ 133
Query: 123 HTKTTGRRGRTVGVSKK 139
T TTGR G TVGVSKK
Sbjct: 134 RTATTGRLGMTVGVSKK 150
>gi|284162135|ref|YP_003400758.1| 30S ribosomal protein S13 [Archaeoglobus profundus DSM 5631]
gi|284012132|gb|ADB58085.1| ribosomal protein S13 [Archaeoglobus profundus DSM 5631]
Length = 146
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + VM ALT IKG G R + + ++ + GE +E ++++ ++ +
Sbjct: 11 TDLDGNKPVMIALTGIKGIGLRMAKAITSALGLNPRAKLGELDDETIERLRKLVEEELEQ 70
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD GK +L + +D D+E++ KI+ +RG+RH G +VRGQ
Sbjct: 71 HIPSWMFNRRKDPYSGKDLHLL---SKDVDFAKMLDIEKMIKIKCYRGVRHAKGYKVRGQ 127
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++TGR+G TVGV ++K
Sbjct: 128 RTRSTGRKGMTVGVVRRK 145
>gi|432329917|ref|YP_007248060.1| archaeal ribosomal protein S13P [Methanoregula formicicum SMSP]
gi|432136626|gb|AGB01553.1| archaeal ribosomal protein S13P [Methanoregula formicicum SMSP]
Length = 153
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 82/140 (58%), Gaps = 8/140 (5%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V ALT IKG GR + ++ + A +D + G E V+++ T + Q
Sbjct: 15 TTDLDGTKSVRVALTGIKGVGRHTATVITRMAKVDEYAQLGRMDEASVNRLRTAV---EQ 71
Query: 62 Y--KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Y KIP W NR KDI G+ + A ++ ED+ ++KIR +RG+RH G +V
Sbjct: 72 YNSKIPTWMANRPKDIYTGEQKHLF---GADVNLTKDEDVNLMRKIRCYRGIRHETGQKV 128
Query: 120 RGQHTKTTGRRGRTVGVSKK 139
RGQ TK+TGR G TVGV +K
Sbjct: 129 RGQRTKSTGRTGSTVGVKRK 148
>gi|150402489|ref|YP_001329783.1| 30S ribosomal protein S13P [Methanococcus maripaludis C7]
gi|159905737|ref|YP_001549399.1| 30S ribosomal protein S13P [Methanococcus maripaludis C6]
gi|150033519|gb|ABR65632.1| ribosomal protein S13 [Methanococcus maripaludis C7]
gi|159887230|gb|ABX02167.1| ribosomal protein S13 [Methanococcus maripaludis C6]
Length = 149
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+++GK + +AL +KG GR + V++ ++D ++AG ++E+V KI +++ +P +
Sbjct: 15 TDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLEDPATH 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD+ G ++ T L ++ED+ +KKIR +RG+RH L RGQ
Sbjct: 75 GIPSWMFNRKKDVYSGLDKHLIETD---LVLTVQEDITNMKKIRCYRGVRHELRLPCRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+ + R+G ++GV +KK
Sbjct: 132 RTRGSFRKGTSMGVKRKK 149
>gi|240276443|gb|EER39955.1| ribosomal protein S13p/S18e [Ajellomyces capsulatus H143]
Length = 51
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/50 (94%), Positives = 50/50 (100%)
Query: 91 LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
++SKLREDLERLKKIRAHRG+RHYWGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 1 MESKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 50
>gi|431920563|gb|ELK18433.1| 40S ribosomal protein S18 [Pteropus alecto]
Length = 88
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 61/71 (85%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNI+G+ K+ FA+TAIK GRR++++VL+KADI+L KRAGE +E+EV++ ITIM NP
Sbjct: 16 LNTNINGQWKIAFAITAIKDMGRRYAHVVLRKADINLTKRAGELTEDEVERGITIMQNPC 75
Query: 61 QYKIPDWFLNR 71
QYKIPD FL+R
Sbjct: 76 QYKIPDLFLDR 86
>gi|157929908|gb|ABW04142.1| ribosomal protein S18 [Epinephelus coioides]
Length = 50
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/50 (94%), Positives = 50/50 (100%)
Query: 91 LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
LD+KLREDLERLKKIRAHRG+RH+WGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 1 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 50
>gi|150401524|ref|YP_001325290.1| 30S ribosomal protein S13 [Methanococcus aeolicus Nankai-3]
gi|150014227|gb|ABR56678.1| ribosomal protein S13 [Methanococcus aeolicus Nankai-3]
Length = 149
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+I G+ + +AL IKG G+ + +L+ +D ++AG S+E+V KI I+ P ++
Sbjct: 15 TDITGEFPLEYALQDIKGIGKAMAKAILRITKLDGKQQAGLMSDEDVKKIEDILNEPAKH 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+ D+ G ++ + L ++ED+ +KKIR +RG+RH GL RGQ
Sbjct: 75 GIPSWMFNRKNDVYSGLNKHLI---ESDLTMAVQEDIATMKKIRCYRGIRHELGLPCRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+ + R+G VGV ++K
Sbjct: 132 RTRGSFRKGSLVGVKRRK 149
>gi|118431572|ref|NP_148134.2| 30S ribosomal protein S13 [Aeropyrum pernix K1]
gi|32363509|sp|Q9YB60.2|RS13_AERPE RecName: Full=30S ribosomal protein S13
gi|116062897|dbj|BAA80738.2| 30S ribosomal protein S13P [Aeropyrum pernix K1]
Length = 150
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+IDG K+ + L +IKG G + V++ +D K+ G +EEE+ ++ ++ + Q
Sbjct: 15 GVDIDGDLKLPYGLASIKGIGYTTAMAVIRMLGLDPEKKVGFLTEEEIRRLDEVLRDITQ 74
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+P W NR+KD GK ++ ++L R D+ER KI + RG+RH +GL+VRG
Sbjct: 75 LGLPKWLYNRRKDYETGKDLHLI---GSELIFYARRDIEREMKIGSWRGIRHKYGLKVRG 131
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T+TTGR G T+GV KK+
Sbjct: 132 QRTRTTGRLGMTIGVRKKR 150
>gi|154151764|ref|YP_001405382.1| 30S ribosomal protein S13 [Methanoregula boonei 6A8]
gi|154000316|gb|ABS56739.1| ribosomal protein S13 [Methanoregula boonei 6A8]
Length = 153
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V ALT IKG GR S ++ + A +D + G EE V++I +
Sbjct: 15 TTDLDGTKSVRVALTGIKGIGRHTSTVISRMAKVDEYAKLGLLDEESVNRIRAAV-EKYA 73
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP W NR KD+ G+ ++ A ED+ ++KIR ++G+RH G +VRG
Sbjct: 74 TSIPMWMANRPKDLYTGENKHLIGGDVALARD---EDINMMRKIRCYKGIRHETGQKVRG 130
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q TK+TGR G TVGVSKKK
Sbjct: 131 QRTKSTGRTGTTVGVSKKK 149
>gi|386876430|ref|ZP_10118544.1| ribosomal protein S13p/S18e [Candidatus Nitrosopumilus salaria
BD31]
gi|386805754|gb|EIJ65259.1| ribosomal protein S13p/S18e [Candidatus Nitrosopumilus salaria
BD31]
Length = 187
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I G+RK++ LT IKG G F+ +L I+ N G +E V I ++T+P
Sbjct: 16 VGNDIPGERKMLVGLTQIKGIGYNFATAILDTLKINTNSNIGNLTESNVQAIEKLITDPV 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
P WFLNR+KDI G +L T+ + LR D+ER + + RG RH GL+VR
Sbjct: 76 GGNFPTWFLNRRKDIETGANLHLL---TSDIPFTLRNDIERERITASWRGYRHLSGLKVR 132
Query: 121 GQHTKTTGR 129
GQ T+T+GR
Sbjct: 133 GQRTRTSGR 141
>gi|347524507|ref|YP_004782077.1| 30S ribosomal protein S13P [Pyrolobus fumarii 1A]
gi|343461389|gb|AEM39825.1| ribosomal protein S13P [Pyrolobus fumarii 1A]
Length = 151
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
T++DG+ KV FAL IKG G F+ + + ID KRAG ++ E+ KI + +P+
Sbjct: 15 GTDLDGRLKVPFALAKIKGVGITFAYALCRLLGIDPEKRAGYLTDAEIQKIEQALKDPKA 74
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP W LNR+KD G+ ++ A+L R+D+ERLK+I++ RG+RH GL+VRG
Sbjct: 75 IGIPSWMLNRRKDYETGRDMHLI---GAELIYYARQDIERLKRIKSWRGIRHALGLKVRG 131
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T+TTGR G TVGVSK++
Sbjct: 132 QRTRTTGRTGMTVGVSKRR 150
>gi|158187838|gb|ABW23208.1| ribosomal protein rps18 [Eurythoe complanata]
Length = 55
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/50 (92%), Positives = 50/50 (100%)
Query: 91 LDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
LD+KLREDLERLKKIRAHRG+RH+WG+RVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 6 LDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTVGVSKKK 55
>gi|448431141|ref|ZP_21584969.1| 30S ribosomal protein S13P [Halorubrum tebenquichense DSM 14210]
gi|445688288|gb|ELZ40553.1| 30S ribosomal protein S13P [Halorubrum tebenquichense DSM 14210]
Length = 173
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KAD+D + G EE++D ++ I N +
Sbjct: 27 DLDGTKTVERSLSELDGIGTRTARLVAEKADVDRSATFGLLDEEDIDAVVDIAENLEDH- 85
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T +D K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 VPSWMTNRQNDFFTGETTHLVGTD---VDEKRRHDINRMKIIESYKGVRHKRGQKVRGQR 142
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 TKSTGRSEGTIGVN 156
>gi|448534357|ref|ZP_21621685.1| 30S ribosomal protein S13P [Halorubrum hochstenium ATCC 700873]
gi|445704839|gb|ELZ56746.1| 30S ribosomal protein S13P [Halorubrum hochstenium ATCC 700873]
Length = 173
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KAD+D + G EE++D ++ I N +
Sbjct: 27 DLDGTKTVERSLSELDGIGTRTARLVAEKADVDRSATFGLLDEEDIDAVVDIAENLEDH- 85
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T +D K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 VPSWMTNRQNDFFTGETTHLVGTD---VDEKRRHDINRMKIIESYKGVRHKRGQKVRGQR 142
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 TKSTGRSEGTIGVN 156
>gi|327400269|ref|YP_004341108.1| 30S ribosomal protein S13P [Archaeoglobus veneficus SNP6]
gi|327315777|gb|AEA46393.1| ribosomal protein S13P [Archaeoglobus veneficus SNP6]
Length = 147
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + VMFALT IKG G R + ++ ID ++ GE +E ++K+ + +
Sbjct: 13 TDLDGSKSVMFALTGIKGIGLRMAKSIVSALGIDGRQKLGEMDDETIEKLRKFVEEDIE- 71
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W LNR+KD GK +L + +D D+E + +++ +RG+RH G +VRGQ
Sbjct: 72 SLPSWLLNRRKDPHTGKDLHLL---SKDVDFAKMVDIETMIRMKCYRGIRHARGKKVRGQ 128
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++TGR GRTVGV ++K
Sbjct: 129 RTRSTGRSGRTVGVIRRK 146
>gi|327311848|ref|YP_004338745.1| 30S ribosomal protein S13 [Thermoproteus uzoniensis 768-20]
gi|326948327|gb|AEA13433.1| 30S ribosomal protein S13P [Thermoproteus uzoniensis 768-20]
Length = 156
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+++G + V FAL IKG G + + ++ +D G SEE++ K+ + N +
Sbjct: 13 TDLEGAKAVAFALARIKGIGISSAFAICRRLGVDPYAPLGSLSEEQISKLDWAVRNLHEI 72
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WFLNR++D V G+ ++ ++L + D++ +KK+R+ +GMRH GL+VRGQ
Sbjct: 73 A-PAWFLNRRRDPVSGRDVHLI---GSELILAAKSDIDLMKKLRSWKGMRHAAGLKVRGQ 128
Query: 123 HTKTTGRRGRTVGVSKKK 140
T TTGR G T GV+KKK
Sbjct: 129 RTVTTGRFGPTAGVAKKK 146
>gi|45358882|ref|NP_988439.1| 30S ribosomal protein S13P [Methanococcus maripaludis S2]
gi|340624630|ref|YP_004743083.1| 30S ribosomal protein S13 [Methanococcus maripaludis X1]
gi|74553909|sp|Q6LXN1.1|RS13_METMP RecName: Full=30S ribosomal protein S13
gi|45047748|emb|CAF30875.1| SSU ribosomal protein S13 [Methanococcus maripaludis S2]
gi|339904898|gb|AEK20340.1| 30S ribosomal protein S13P [Methanococcus maripaludis X1]
Length = 149
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+++GK + +AL +KG GR + V++ ++D ++AG ++E+V KI +++ +P +
Sbjct: 15 TDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLEDPATH 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD+ G ++ T L ++ED+ +KKIR ++G+RH L RGQ
Sbjct: 75 GIPSWMFNRKKDVYSGLDKHLIETD---LVLTVQEDITNMKKIRCYKGIRHELRLPCRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+ + R+G ++GV +KK
Sbjct: 132 RTRGSFRKGTSMGVKRKK 149
>gi|297618742|ref|YP_003706847.1| 30S ribosomal protein S13P [Methanococcus voltae A3]
gi|297377719|gb|ADI35874.1| ribosomal protein S13P [Methanococcus voltae A3]
Length = 149
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++ G+ + +AL IKG GR + +++ ++D +AG +EEV KI +++ +P ++
Sbjct: 15 TDLKGESPLEYALQEIKGIGRAMARAIIRLTELDPKVQAGYIGDEEVAKIESVLEDPAKH 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD+ G ++ T L ++ED+ +KK+R +RG+RH L RGQ
Sbjct: 75 GIPSWMFNRKKDVYSGLDKHLIETD---LTMTVQEDITTMKKLRCYRGIRHELRLPCRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+ + R+G ++GV ++K
Sbjct: 132 RTRGSFRKGSSMGVKRRK 149
>gi|448425436|ref|ZP_21582766.1| 30S ribosomal protein S13P [Halorubrum terrestre JCM 10247]
gi|448453319|ref|ZP_21593762.1| 30S ribosomal protein S13P [Halorubrum litoreum JCM 13561]
gi|448485429|ref|ZP_21606654.1| 30S ribosomal protein S13P [Halorubrum arcis JCM 13916]
gi|448504666|ref|ZP_21614007.1| 30S ribosomal protein S13P [Halorubrum distributum JCM 9100]
gi|448519099|ref|ZP_21617875.1| 30S ribosomal protein S13P [Halorubrum distributum JCM 10118]
gi|445680507|gb|ELZ32950.1| 30S ribosomal protein S13P [Halorubrum terrestre JCM 10247]
gi|445701876|gb|ELZ53848.1| 30S ribosomal protein S13P [Halorubrum distributum JCM 9100]
gi|445704115|gb|ELZ56033.1| 30S ribosomal protein S13P [Halorubrum distributum JCM 10118]
gi|445807639|gb|EMA57722.1| 30S ribosomal protein S13P [Halorubrum litoreum JCM 13561]
gi|445818083|gb|EMA67950.1| 30S ribosomal protein S13P [Halorubrum arcis JCM 13916]
Length = 173
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KAD+D N G E+++D ++ I N +
Sbjct: 27 DLDGTKTVERSLSELDGIGTRTARLVAEKADVDRNATFGLLDEDDIDAVVDIAENLEDH- 85
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T ++ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 VPSWMTNRQNDFFSGETTHLVGTD---VNEKRRHDINRMKIIESYKGVRHKRGQKVRGQR 142
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 TKSTGRSEGTIGVN 156
>gi|448565306|ref|ZP_21636173.1| 30S ribosomal protein S13P [Haloferax prahovense DSM 18310]
gi|445715050|gb|ELZ66806.1| 30S ribosomal protein S13P [Haloferax prahovense DSM 18310]
Length = 167
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ +KG G+R + I+ A++D G+ E+E+D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLSDMKGIGKRTARIIADAAEVDRTALFGKLPEDEIDAVVDVVENFEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W NR+KD G+ I + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -APEWMANRRKDFFSGETDHI---TGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|76802056|ref|YP_327064.1| 30S ribosomal protein S13P [Natronomonas pharaonis DSM 2160]
gi|121724406|sp|Q3IQT9.1|RS13_NATPD RecName: Full=30S ribosomal protein S13
gi|76557921|emb|CAI49505.1| 30S ribosomal protein S13 [Natronomonas pharaonis DSM 2160]
Length = 170
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 82/137 (59%), Gaps = 8/137 (5%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G GRR + I+ +KA++D G EE++D ++ + +Y
Sbjct: 24 TDLDGTKSVERALTDMNGIGRRVARIIAEKAEVDRRDVLGALDEEKIDDVVAAV---EEY 80
Query: 63 --KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++P+W N QKD G+ + + L R+D+ R+KKI A+RG+RH G +VR
Sbjct: 81 GDEVPEWLTNHQKDFFTGETTHEIGND---LQMSRRQDINRMKKIDAYRGVRHKRGQKVR 137
Query: 121 GQHTKTTGRRGRTVGVS 137
GQ TK+TGR T+GV+
Sbjct: 138 GQRTKSTGRTEGTIGVN 154
>gi|410721687|ref|ZP_11361017.1| archaeal ribosomal protein S13P [Methanobacterium sp. Maddingley
MBC34]
gi|410598433|gb|EKQ53006.1| archaeal ribosomal protein S13P [Methanobacterium sp. Maddingley
MBC34]
Length = 150
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+I+G + ++ ALT IKG G+ S + D D N++ G S+EEV ++ + NP+
Sbjct: 15 DINGNKTIVNALTDIKGVGKALSGAICTTMDFDPNQKIGTLSDEEVLRLEEAVKNPKNDI 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IP+W LNR+ D G+ + ++ + L LR+DL R+KK R+++G RH GL VRGQ
Sbjct: 75 IPEWMLNRRNDYETGQTTHLI---ESDLVMCLRDDLNRMKKTRSYKGRRHEVGLPVRGQR 131
Query: 124 TKTTGRR 130
TK+T R+
Sbjct: 132 TKSTFRK 138
>gi|134045319|ref|YP_001096805.1| 30S ribosomal protein S13P [Methanococcus maripaludis C5]
gi|132662944|gb|ABO34590.1| SSU ribosomal protein S13P [Methanococcus maripaludis C5]
Length = 149
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+++GK + +AL +KG GR + V++ ++D ++AG ++E+V KI +++ +P +
Sbjct: 15 TDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLEDPATH 74
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR+KD+ G ++ T L ++ED+ +KKIR ++G+RH L RGQ
Sbjct: 75 GIPSWMFNRKKDVYSGLDKHLIETD---LVLTVQEDITNMKKIRCYKGVRHELRLPCRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+ + R+G ++GV ++K
Sbjct: 132 RTRGSFRKGTSMGVKRRK 149
>gi|429216767|ref|YP_007174757.1| 30S ribosomal protein S13 [Caldisphaera lagunensis DSM 15908]
gi|429133296|gb|AFZ70308.1| archaeal ribosomal protein S13P [Caldisphaera lagunensis DSM 15908]
Length = 164
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
T+I+G V+ L+ IKG G + + +++ ID KR G S EE+ + ++ + +
Sbjct: 19 ETDINGNLNVILGLSKIKGIGYQTALAIVRHLGIDPKKRIGYLSNEELKSLEDVLNDLTK 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
K+P+W NR+KD G ++ A+L R D+ER +K+ + RG+RH GL+VRG
Sbjct: 79 LKLPNWMYNRRKDYETGLDKHLI---GAELIFVARRDVEREQKVNSWRGVRHKLGLKVRG 135
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T TTGR G T+GV K+K
Sbjct: 136 QKTHTTGRLGMTIGVKKEK 154
>gi|448491317|ref|ZP_21608258.1| 30S ribosomal protein S13P [Halorubrum californiensis DSM 19288]
gi|445693088|gb|ELZ45250.1| 30S ribosomal protein S13P [Halorubrum californiensis DSM 19288]
Length = 173
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KAD+D N G E+++D ++ I N +
Sbjct: 27 DLDGTKTVERSLSELDGIGTRTARLVAEKADVDRNATFGLLDEDDIDAVVDIAENLEDH- 85
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T ++ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 VPSWMTNRQNDFFTGETTHLVGTD---VNEKRRHDINRMKIIESYKGVRHKRGQKVRGQR 142
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 TKSTGRSEGTIGVN 156
>gi|222480228|ref|YP_002566465.1| 30S ribosomal protein S13P [Halorubrum lacusprofundi ATCC 49239]
gi|222453130|gb|ACM57395.1| ribosomal protein S13 [Halorubrum lacusprofundi ATCC 49239]
Length = 174
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KAD+D N G E+++D ++ I N +
Sbjct: 27 DLDGTKTVERSLSELDGIGTRTARLVAEKADVDRNATFGLLDEDDLDAVVDIAENLEDH- 85
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T ++ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 VPSWMTNRQNDFYSGETTHLVGTDVSE---KRRHDINRMKIIESYKGVRHKRGQKVRGQR 142
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 TKSTGRSEGTIGVN 156
>gi|432329432|ref|YP_007247576.1| archaeal ribosomal protein S13P [Aciduliprofundum sp. MAR08-339]
gi|432136141|gb|AGB05410.1| archaeal ribosomal protein S13P [Aciduliprofundum sp. MAR08-339]
Length = 148
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 90/138 (65%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG R +++A+ IKG G R + ++K ++ ++ GE S+E++++I I+ +
Sbjct: 13 TDLDGNRPIIYAIQGIKGIGYRVAEGIVKDLSMNPRQKIGELSDEQIEEIRVIIEEKLEE 72
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W +N +KD G+ +L T +LD + ++D+ RLK+I+ +RG+RH GL VRGQ
Sbjct: 73 ILPGWMMNHRKDYFTGEDRHVLST---ELDLQKQDDINRLKRIKCYRGVRHERGLPVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++ GR G TVGVS+KK
Sbjct: 130 RTRSNGRSGLTVGVSRKK 147
>gi|448602321|ref|ZP_21656377.1| 30S ribosomal protein S13P [Haloferax sulfurifontis ATCC BAA-897]
gi|445747836|gb|ELZ99290.1| 30S ribosomal protein S13P [Haloferax sulfurifontis ATCC BAA-897]
Length = 167
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R + I+ A+++ G+ E+E+D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLTDMKGIGKRTARIIADAAEVNRTALFGKLPEDEIDSVVDVVENFEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W NR+KD G+ I + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -APEWMANRRKDFFSGETDHI---TGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|48478291|ref|YP_023997.1| 30S ribosomal protein S13 [Picrophilus torridus DSM 9790]
gi|74567419|sp|Q6KZP8.1|RS13_PICTO RecName: Full=30S ribosomal protein S13
gi|48430939|gb|AAT43804.1| small subunit ribosomal protein S13P [Picrophilus torridus DSM
9790]
Length = 158
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 86/139 (61%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+ +++G+R + AL +KG G R S + KK D+D ++R GE E++++++ +
Sbjct: 19 NKDLNGERPLKLALADLKGIGLRLSETIAKKLDLDPDQRIGELGEDKIEELRKYIEGKVY 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
IP W N ++DI GK ++ + LD ++ +D+ +KK+R+++G+RH GL+VRG
Sbjct: 79 DGIPYWMYNHRRDITTGKDFNLV---SNDLDLQINDDINLMKKMRSYKGIRHERGLKVRG 135
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q ++ GR+G +GV +KK
Sbjct: 136 QRMRSNGRKGLAIGVVRKK 154
>gi|448583256|ref|ZP_21646612.1| 30S ribosomal protein S13P [Haloferax gibbonsii ATCC 33959]
gi|448622860|ref|ZP_21669509.1| 30S ribosomal protein S13P [Haloferax denitrificans ATCC 35960]
gi|445729485|gb|ELZ81080.1| 30S ribosomal protein S13P [Haloferax gibbonsii ATCC 33959]
gi|445753368|gb|EMA04785.1| 30S ribosomal protein S13P [Haloferax denitrificans ATCC 35960]
Length = 167
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R + I+ A+++ G+ E+E+D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLTDMKGIGKRTARIIADAAEVNRTALFGKLPEDEIDSVVDVVENFEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W NR+KD G+ I + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -APEWMANRRKDFFSGETDHI---TGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|407464186|ref|YP_006775068.1| 30S ribosomal protein S13 [Candidatus Nitrosopumilus sp. AR2]
gi|407047374|gb|AFS82126.1| 30S ribosomal protein S13P [Candidatus Nitrosopumilus sp. AR2]
Length = 189
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I G++K++ LT IKG G F+ +L I+ N G ++E V I ++T+P
Sbjct: 13 VGNDIRGEKKMVIGLTQIKGLGYNFATAILDTLKINPNSNIGNLTDENVQAIEKLITDPI 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
P WFLNR+KDI G +L T+ + LR D+ER + + RG RH GL+VR
Sbjct: 73 ASNFPSWFLNRRKDIETGADLHLL---TSDIPFTLRNDIERERITASWRGYRHLSGLKVR 129
Query: 121 GQHTKTTGR 129
GQ T+T+GR
Sbjct: 130 GQRTRTSGR 138
>gi|433418978|ref|ZP_20405137.1| 30S ribosomal protein S13P [Haloferax sp. BAB2207]
gi|448568217|ref|ZP_21637794.1| 30S ribosomal protein S13P [Haloferax lucentense DSM 14919]
gi|448600842|ref|ZP_21656221.1| 30S ribosomal protein S13P [Haloferax alexandrinus JCM 10717]
gi|432199586|gb|ELK55747.1| 30S ribosomal protein S13P [Haloferax sp. BAB2207]
gi|445727167|gb|ELZ78781.1| 30S ribosomal protein S13P [Haloferax lucentense DSM 14919]
gi|445734855|gb|ELZ86411.1| 30S ribosomal protein S13P [Haloferax alexandrinus JCM 10717]
Length = 167
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R + I+ A++D G+ E E+D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLTDMKGIGKRTARIIADAAEVDRTALFGKLPEGEIDSVVDVVENFEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W NR+KD G I + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -APEWMANRRKDFFSGDTDHI---TGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|292656901|ref|YP_003536798.1| 30S ribosomal protein S13 [Haloferax volcanii DS2]
gi|448290901|ref|ZP_21482046.1| 30S ribosomal protein S13P [Haloferax volcanii DS2]
gi|291370341|gb|ADE02568.1| ribosomal protein S13 [Haloferax volcanii DS2]
gi|445577954|gb|ELY32374.1| 30S ribosomal protein S13P [Haloferax volcanii DS2]
Length = 167
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R + I+ A++D G+ E E+D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLTDMKGIGKRTARIIADAAEVDRTALFGKLPEGEIDAVVDVVENFEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W NR+KD G I + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -APEWMANRRKDFFSGDTDHI---TGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|448440155|ref|ZP_21588403.1| 30S ribosomal protein S13P [Halorubrum saccharovorum DSM 1137]
gi|445690672|gb|ELZ42882.1| 30S ribosomal protein S13P [Halorubrum saccharovorum DSM 1137]
Length = 174
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KAD+D N G E+++D ++ I N +
Sbjct: 28 DLDGTKTVERSLSELDGIGTRTARLVAEKADVDRNATFGLLDEDDLDTVVDIAENLEDH- 86
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T ++ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 87 VPSWMTNRQNDFYSGETTHLVGTD---VNEKRRHDINRMKIIESYKGVRHKRGQKVRGQR 143
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 144 TKSTGRSEGTIGVN 157
>gi|448465606|ref|ZP_21598872.1| 30S ribosomal protein S13P [Halorubrum kocurii JCM 14978]
gi|445814938|gb|EMA64886.1| 30S ribosomal protein S13P [Halorubrum kocurii JCM 14978]
Length = 174
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KAD+D N G E ++D ++ I N +
Sbjct: 27 DLDGTKTVERSLSELDGIGTRTARLVAEKADVDKNATFGLLDEGDIDAVVDIAENLEDH- 85
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T ++ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 VPSWMTNRQNDFYSGETTHLVGTDVSE---KRRHDINRMKIIESYKGVRHKRGQKVRGQR 142
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 TKSTGRSEGTIGVN 156
>gi|352682743|ref|YP_004893267.1| 30S ribosomal protein S13p [Thermoproteus tenax Kra 1]
gi|350275542|emb|CCC82189.1| 30S ribosomal protein S13p [Thermoproteus tenax Kra 1]
Length = 154
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 81/138 (58%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + +ALT IKG G + + ++ ID G EE++ K+ + N +
Sbjct: 13 TDLDGGKATAYALTKIKGIGIASALAICRRLGIDPYAPLGSLGEEQISKLDWAVRNLNEI 72
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WFLNR+KD V G+ ++ ++L + D++ +KK+R+ +GMRH GL+VRGQ
Sbjct: 73 A-PPWFLNRRKDPVSGRDLHLI---GSELILAAKNDIDLMKKLRSWKGMRHAAGLKVRGQ 128
Query: 123 HTKTTGRRGRTVGVSKKK 140
T TTGR G T GV KKK
Sbjct: 129 RTVTTGRFGPTAGVVKKK 146
>gi|345004810|ref|YP_004807663.1| 30S ribosomal protein S13 [halophilic archaeon DL31]
gi|344320436|gb|AEN05290.1| ribosomal protein S13P [halophilic archaeon DL31]
Length = 174
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 84/135 (62%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+++DG + V +L+ +KG G+R + IV KA++D G E+++ +I ++ + ++
Sbjct: 25 SDLDGTKSVERSLSELKGIGKRMARIVADKANVDRQATFGALDEDDIQDVIDVVESLDEH 84
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W +NRQ+D G+ S + + + L+ R D+ R+K I +++G+RH G +VRGQ
Sbjct: 85 -VPSWMVNRQEDFFTGETSHV---TGSDLEESRRHDINRMKMISSYKGVRHKRGKKVRGQ 140
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 141 RTKSTGRTEGTIGVN 155
>gi|305662631|ref|YP_003858919.1| 30S ribosomal protein S13 [Ignisphaera aggregans DSM 17230]
gi|304377200|gb|ADM27039.1| SSU ribosomal protein S13P [Ignisphaera aggregans DSM 17230]
Length = 156
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 82/134 (61%), Gaps = 3/134 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+I G+ + + L+ +KG G + + + +D + G +++E++KI ++ NP++Y
Sbjct: 14 TDIAGELSLSWGLSRVKGIGYNMAIAICRILGLDPSMPIGFITDQEIEKIEELLKNPQKY 73
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP WFLNR+KD G ++ +++L R+D++R +IR+ RG+RH G +VRGQ
Sbjct: 74 GIPVWFLNRRKDYETGNDMHLV---SSELIYYARQDIDREIRIRSWRGIRHAMGYKVRGQ 130
Query: 123 HTKTTGRRGRTVGV 136
T TTGR G VGV
Sbjct: 131 RTHTTGRIGPVVGV 144
>gi|424813877|ref|ZP_18239055.1| ribosomal protein S13 [Candidatus Nanosalina sp. J07AB43]
gi|339757493|gb|EGQ42750.1| ribosomal protein S13 [Candidatus Nanosalina sp. J07AB43]
Length = 159
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T IDG + V ALT +KG G ++N V + D + N G +EE+DKI + NP Q
Sbjct: 13 TGIDGNKPVRKALTGLKGVGEMYANAVAESMDYN-NTVIGNLDDEEIDKIEEKIKNPDQL 71
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W NR+KD G+ ++ LD K D+ RLK+I +++G RH GL VRGQ
Sbjct: 72 DVPAWLRNRRKDRETGEDLHLI---EDDLDLKQEFDVRRLKEINSYKGWRHEIGLPVRGQ 128
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+++ R G +GVS+ +
Sbjct: 129 KTQSSFRSGDKIGVSRAR 146
>gi|119872422|ref|YP_930429.1| 30S ribosomal protein S13 [Pyrobaculum islandicum DSM 4184]
gi|158706269|sp|A1RT04.1|RS13_PYRIL RecName: Full=30S ribosomal protein S13
gi|119673830|gb|ABL88086.1| SSU ribosomal protein S13P [Pyrobaculum islandicum DSM 4184]
Length = 153
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG ++V ++LT I+G G + + +K ID + G SEE+++K+ + N +
Sbjct: 14 TDLDGNKQVAYSLTKIRGIGIATAYAICRKLGIDPHAILGALSEEQINKLDWAVRNLHEL 73
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WFLNR+KD GK ++ A+L + D++ +KK+++ +G+RH GL+VRGQ
Sbjct: 74 A-PAWFLNRRKDPETGKDLHLI---GAELVLAAKRDVDLMKKLKSWKGVRHSLGLKVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
T TTGR G GV+KKK
Sbjct: 130 RTVTTGRLGPVAGVTKKK 147
>gi|408381891|ref|ZP_11179438.1| 30S ribosomal protein S13P [Methanobacterium formicicum DSM 3637]
gi|407815339|gb|EKF85924.1| 30S ribosomal protein S13P [Methanobacterium formicicum DSM 3637]
Length = 150
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + ++ A+T IKG G+ S + D D N++ G S++EV ++ + NP+ K
Sbjct: 15 DVDGNKTIINAMTDIKGIGKALSGAICTTMDFDPNQQIGYLSDKEVLRLEEAVKNPKNGK 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
IP+W NR+ D G+ ++ + LR+DL R+KK R+++G RH GL VRGQ
Sbjct: 75 IPEWMFNRRNDYETGETGHLIESDLVMC---LRDDLNRMKKTRSYKGRRHEVGLPVRGQR 131
Query: 124 TKTTGRR 130
TK+T R+
Sbjct: 132 TKSTFRK 138
>gi|448499363|ref|ZP_21611290.1| 30S ribosomal protein S13P [Halorubrum coriense DSM 10284]
gi|445697318|gb|ELZ49383.1| 30S ribosomal protein S13P [Halorubrum coriense DSM 10284]
Length = 173
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KAD+D N G E ++D ++ I N +
Sbjct: 27 DLDGTKTVERSLSELDGIGTRTARLVAEKADVDRNATFGLLDEGDIDAVVDIAENLEDH- 85
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T ++ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 VPSWMTNRQNDFFTGETTHLVGTD---VNEKRRHDINRMKIIESYKGVRHKRGQKVRGQR 142
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 TKSTGRSEGTIGVN 156
>gi|307595928|ref|YP_003902245.1| 30S ribosomal protein S13 [Vulcanisaeta distributa DSM 14429]
gi|307551129|gb|ADN51194.1| ribosomal protein S13P [Vulcanisaeta distributa DSM 14429]
Length = 160
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +ALT I+G G + + + I+ + R G+ +E V K+ + N Q+
Sbjct: 14 TDLDGFKPVAYALTKIRGIGISTAYAICRYLGINPSIRLGQLDDETVRKLDWAVRNLHQF 73
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WF+NR KD G+ +L A L ++D++ +KK+R+ +G+RH GL+VRGQ
Sbjct: 74 A-PGWFVNRPKDPETGRNIHLL---GADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+TTGR G TVGV+K K
Sbjct: 130 RTRTTGRLGLTVGVTKGK 147
>gi|448460440|ref|ZP_21597265.1| 30S ribosomal protein S13P [Halorubrum lipolyticum DSM 21995]
gi|445807181|gb|EMA57267.1| 30S ribosomal protein S13P [Halorubrum lipolyticum DSM 21995]
Length = 174
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KAD+D N G E ++D ++ I N +
Sbjct: 27 DLDGTKTVERSLSELDGIGTRTARLVAEKADVDKNATFGLLDEGDLDAVVDIAENLEDH- 85
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T ++ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 VPSWMTNRQNDFYSGETTHLVGTD---VNEKRRHDINRMKIIESYKGVRHKRGQKVRGQR 142
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 TKSTGRSEGTIGVN 156
>gi|424812601|ref|ZP_18237841.1| ribosomal protein S13 [Candidatus Nanosalinarum sp. J07AB56]
gi|339756823|gb|EGQ40406.1| ribosomal protein S13 [Candidatus Nanosalinarum sp. J07AB56]
Length = 160
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+IDG R + AL ++KG G ++N + K + D G+ SE E+D I + NP +
Sbjct: 13 TDIDGTRPIPQALKSLKGVGDAYANAIAKAVEHDPETPIGDLSESEIDGIEETLENPDET 72
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W +NR++D G+ ++ + LD + D+ R ++I ++RG RH GL VRGQ
Sbjct: 73 DLPSWMVNRRRDRETGEDKHVV---GSDLDLQEEFDIRRYQEIGSYRGWRHELGLPVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
TK++ R +GVS+ +
Sbjct: 130 KTKSSFRSDDKIGVSRAR 147
>gi|448546361|ref|ZP_21626525.1| 30S ribosomal protein S13P [Haloferax sp. ATCC BAA-646]
gi|448548348|ref|ZP_21627615.1| 30S ribosomal protein S13P [Haloferax sp. ATCC BAA-645]
gi|448557542|ref|ZP_21632731.1| 30S ribosomal protein S13P [Haloferax sp. ATCC BAA-644]
gi|445702814|gb|ELZ54754.1| 30S ribosomal protein S13P [Haloferax sp. ATCC BAA-646]
gi|445714099|gb|ELZ65866.1| 30S ribosomal protein S13P [Haloferax sp. ATCC BAA-644]
gi|445714443|gb|ELZ66205.1| 30S ribosomal protein S13P [Haloferax sp. ATCC BAA-645]
Length = 167
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R + I+ A+++ G+ E E+D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLTDMKGIGKRTARIIADAAEVNRTALFGKLPEGEIDAVVDVVENFEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W NR+KD G I + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -APEWMANRRKDFFSGDTDHI---TGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|269866923|ref|XP_002652434.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
gi|220062509|gb|EED41622.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
Length = 137
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TNIDG +K++FALT I+G G RF+ + +A +D +K AGE S EE+ I ++ P +
Sbjct: 26 NTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVIDEPLK 85
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWG 116
Y IP++FLN QKD V G+ ++ +LD LR +E+ KK + RG R G
Sbjct: 86 YSIPEYFLNHQKDSVTGEDEHLV---GIKLDGDLRMLIEKAKKFKEIRGCRLAMG 137
>gi|218117290|emb|CAQ37772.1| 40S ribosomal protein S18 [Echinorhynchus truttae]
Length = 62
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 51/60 (85%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
FALTAIKG G RFS++ + KA ID+ KRAGE S+EEV+++I ++ NPR+YKIP+WFLNRQ
Sbjct: 3 FALTAIKGIGLRFSHVAVAKAGIDVTKRAGELSDEEVERVIDVILNPREYKIPNWFLNRQ 62
>gi|448474338|ref|ZP_21602197.1| 30S ribosomal protein S13P [Halorubrum aidingense JCM 13560]
gi|445817645|gb|EMA67514.1| 30S ribosomal protein S13P [Halorubrum aidingense JCM 13560]
Length = 174
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG + V +L+ + G G R + +V +KA++D N G E ++D ++ I N +
Sbjct: 27 DLDGTKTVERSLSELDGIGTRTARLVAEKANVDKNATFGLLDEGDIDAVVDIAENLEDH- 85
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NRQ D G+ + ++ T ++ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 VPSWMTNRQNDFYSGETTHLVGTD---VNEKRRHDINRMKVIESYKGVRHKRGQKVRGQR 142
Query: 124 TKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 TKSTGRSEGTIGVN 156
>gi|389848217|ref|YP_006350456.1| 30S ribosomal protein S13 [Haloferax mediterranei ATCC 33500]
gi|448618425|ref|ZP_21666662.1| 30S ribosomal protein S13P [Haloferax mediterranei ATCC 33500]
gi|388245523|gb|AFK20469.1| 30S ribosomal protein S13P [Haloferax mediterranei ATCC 33500]
gi|445746796|gb|ELZ98254.1| 30S ribosomal protein S13P [Haloferax mediterranei ATCC 33500]
Length = 166
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 85/135 (62%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT +KG G+R + I+ A++D G+ E+E+D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLTDMKGIGKRAARIIADAAEVDRTALFGKLPEDEIDSVVGVVENFEDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P+W NRQKD G+ + I + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -VPEWMANRQKDFFSGETNHI---TGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|300708772|ref|XP_002996559.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01]
gi|239605870|gb|EEQ82888.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01]
Length = 161
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+TN+DG ++V+ AL AI G G+R + + K+ +D+ +RAG+ +++E++KI + +P
Sbjct: 25 FNTNVDGTKRVVHALCAITGIGKRMATAICKRTGVDVLRRAGDLNQDELEKIQNAINDPS 84
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
IP F N +K+ VDG + ++ T ++D++ R LE+ KKIR R R GL+V
Sbjct: 85 SVGIPYSFYNYKKNPVDGTNTHLVST---RMDAEYRMMLEKGKKIRHVRLCRVACGLKVH 141
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ +K+ GR R + ++K
Sbjct: 142 GQRSKSNGRHIRAGMIFRRK 161
>gi|452207496|ref|YP_007487618.1| 30S ribosomal protein S13 [Natronomonas moolapensis 8.8.11]
gi|452083596|emb|CCQ36908.1| 30S ribosomal protein S13 [Natronomonas moolapensis 8.8.11]
Length = 171
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G GRR + I+ KAD+D G E ++D I+ ++
Sbjct: 24 TDLDGTKSVERALTDMNGVGRRAARIIADKADVDRRDVIGALDESKIDGIVDLVQGYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P+W N Q+D G+ + + LD R+D+ R+K + +RG+RH G +VRGQ
Sbjct: 83 EVPEWLTNHQRDFFSGETTHEVGND---LDMSRRQDINRMKMVDTYRGVRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|10242302|gb|AAG15373.1| ribosomal protein S18 [Anopheles gambiae]
Length = 46
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/46 (95%), Positives = 45/46 (97%)
Query: 95 LREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
LREDLERLK+I AHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK
Sbjct: 1 LREDLERLKRIHAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 46
>gi|167042556|gb|ABZ07280.1| putative ribosomal protein S13/S18 [uncultured marine microorganism
HF4000_ANIW133F6]
Length = 155
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++IDG R + LT+I G G+R + + ADID K G ++EE D+I + + +
Sbjct: 22 SDIDGLRPIAQGLTSIGGVGQRTAIQLCSMADIDGTKLGGHLTDEEQDRIRSTI-DEYAL 80
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W +NRQ+D+ + + I+ ++ L++D+ RL I+ +RG+RH G +VRGQ
Sbjct: 81 NVPWWLVNRQRDLQSNEDAHII---GMEVKLTLKDDISRLASIKTYRGIRHRSGHKVRGQ 137
Query: 123 HTKTTGRRGRTVGVSKKK 140
++ GR G T+GV KKK
Sbjct: 138 RLRSNGRSGATLGVQKKK 155
>gi|124486067|ref|YP_001030683.1| 30S ribosomal protein S13P [Methanocorpusculum labreanum Z]
gi|158706246|sp|A2SSW0.1|RS13_METLZ RecName: Full=30S ribosomal protein S13
gi|124363608|gb|ABN07416.1| SSU ribosomal protein S13P [Methanocorpusculum labreanum Z]
Length = 150
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++T++DG + V ALT IKG G + I+ ++A +D G +E+V I
Sbjct: 14 INTDLDGTQPVQLALTGIKGIGLHAALIIARRAGVDTRATMGLLGDEDV-AAIEEQVKAY 72
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+P W +NR D+ G+ + + L +D+ +KK+R +RG+RH GL+VR
Sbjct: 73 PASVPKWMVNRPVDVYSGEPKHLY---GSDLSLAKEDDINLMKKMRCYRGIRHENGLKVR 129
Query: 121 GQHTKTTGRRGRTVGVSKKK 140
GQ TK TGR G+ VGVSK++
Sbjct: 130 GQRTKATGRFGKIVGVSKRR 149
>gi|448414209|ref|ZP_21577348.1| 30S ribosomal protein S13P [Halosarcina pallida JCM 14848]
gi|445682502|gb|ELZ34919.1| 30S ribosomal protein S13P [Halosarcina pallida JCM 14848]
Length = 174
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ +KG G+R + IV A +D G E+E+D ++ ++ N +
Sbjct: 26 TDLDGTKSVERSLSDMKGIGKRTARIVTDAAGVDRTATFGLLDEDEIDSVVDVVENFTDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W +NR+ D G+ + + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -APEWMINRRDDFYSGETTH---KTGSDLEEKRRHDINRMKMISSYKGVRHKRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|110668837|ref|YP_658648.1| 30S ribosomal protein S13P [Haloquadratum walsbyi DSM 16790]
gi|121684701|sp|Q18G53.1|RS13_HALWD RecName: Full=30S ribosomal protein S13
gi|109626584|emb|CAJ53048.1| 30S ribosomal protein S13 [Haloquadratum walsbyi DSM 16790]
Length = 173
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V +LT +KG G+R + I+ A +D + G E+E+D I + N
Sbjct: 26 TTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAVENLDD 85
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W NR++D G + A L+ K R D+ R+K I +++G+RH G +VRG
Sbjct: 86 H-IPGWMTNRREDFFSGDTDH---KTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVRG 141
Query: 122 QHTKTTGRRGRTVGVS 137
Q TK+TGR T+GV+
Sbjct: 142 QRTKSTGRTEGTIGVN 157
>gi|385804355|ref|YP_005840755.1| 30S ribosomal protein S13 [Haloquadratum walsbyi C23]
gi|339729847|emb|CCC41130.1| 30S ribosomal protein S13 [Haloquadratum walsbyi C23]
Length = 173
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T++DG + V +LT +KG G+R + I+ A +D + G E+E+D I + N
Sbjct: 26 TTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAVENLDD 85
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W NR++D G + A L+ K R D+ R+K I +++G+RH G +VRG
Sbjct: 86 H-IPGWMTNRREDFFSGDTDH---KTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVRG 141
Query: 122 QHTKTTGRRGRTVGVS 137
Q TK+TGR T+GV+
Sbjct: 142 QRTKSTGRTEGTIGVN 157
>gi|289580104|ref|YP_003478570.1| 30S ribosomal protein S13 [Natrialba magadii ATCC 43099]
gi|448281343|ref|ZP_21472649.1| 30S ribosomal protein S13P [Natrialba magadii ATCC 43099]
gi|289529657|gb|ADD04008.1| ribosomal protein S13P [Natrialba magadii ATCC 43099]
gi|445578765|gb|ELY33165.1| 30S ribosomal protein S13P [Natrialba magadii ATCC 43099]
Length = 171
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +KA +D G E+ +D+++T++ N +
Sbjct: 23 TDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDEDVIDEVVTLVENYAE- 81
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G+RH G +VRGQ
Sbjct: 82 EVPDWLNNRQNDFYSGETTHEIGND---LQLSRQHDINRMKMIDSYKGVRHKRGQKVRGQ 138
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 139 RTKSTGRTEGTIGVN 153
>gi|448322478|ref|ZP_21511948.1| 30S ribosomal protein S13P [Natronococcus amylolyticus DSM 10524]
gi|445601236|gb|ELY55225.1| 30S ribosomal protein S13P [Natronococcus amylolyticus DSM 10524]
Length = 171
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +KA +D G E+ +D+++T++ N
Sbjct: 23 TDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDEDVIDEVVTVVENYAD- 81
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I ++RG+RH G +VRGQ
Sbjct: 82 EVPDWLNNRQNDFYTGETTHEI---GNDLQLTRQHDINRMKMIDSYRGVRHKRGQKVRGQ 138
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 139 RTKSTGRTEGTIGVN 153
>gi|126459585|ref|YP_001055863.1| 30S ribosomal protein S13 [Pyrobaculum calidifontis JCM 11548]
gi|158706268|sp|A3MUT0.1|RS13_PYRCJ RecName: Full=30S ribosomal protein S13
gi|126249306|gb|ABO08397.1| SSU ribosomal protein S13P [Pyrobaculum calidifontis JCM 11548]
Length = 153
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 83/138 (60%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +AL I+G G + + +K ID + G E++++K+ + N +
Sbjct: 14 TDLDGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAVRNLHEL 73
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WFLNR+KD G+ ++ ++L + D++ +KK+++ +G+RH GL+VRGQ
Sbjct: 74 A-PAWFLNRRKDPETGRDLHLI---GSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
T TTGR G T GV+KKK
Sbjct: 130 RTVTTGRFGATAGVTKKK 147
>gi|66771207|gb|AAY54915.1| IP07925p [Drosophila melanogaster]
Length = 246
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 18 IKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIP 65
IKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>gi|448358772|ref|ZP_21547448.1| 30S ribosomal protein S13P [Natrialba chahannaoensis JCM 10990]
gi|445644786|gb|ELY97795.1| 30S ribosomal protein S13P [Natrialba chahannaoensis JCM 10990]
Length = 172
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +KA +D G E+ +D+++T++ N +
Sbjct: 23 TDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDEDVIDEVVTLVENYAE- 81
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 82 EVPDWLNNRQNDFYSGETTHEI---GNDLQLSRQHDINRMKMIDSYKGTRHKRGQKVRGQ 138
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 139 RTKSTGRTEGTIGVN 153
>gi|448352726|ref|ZP_21541507.1| 30S ribosomal protein S13P [Natrialba hulunbeirensis JCM 10989]
gi|445642005|gb|ELY95076.1| 30S ribosomal protein S13P [Natrialba hulunbeirensis JCM 10989]
Length = 171
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +KA +D G E+ +D+++T++ N +
Sbjct: 23 TDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDEDVIDEVVTLVENYAE- 81
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 82 EVPDWLNNRQNDFYSGETTHEI---GNDLQLSRQHDINRMKMIDSYKGTRHKRGQKVRGQ 138
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 139 RTKSTGRTEGTIGVN 153
>gi|18313810|ref|NP_560477.1| 30S ribosomal protein S13 [Pyrobaculum aerophilum str. IM2]
gi|32363374|sp|Q8ZTV0.1|RS13_PYRAE RecName: Full=30S ribosomal protein S13
gi|18161371|gb|AAL64659.1| ribosomal protein S13 [Pyrobaculum aerophilum str. IM2]
Length = 152
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 83/138 (60%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG ++V +AL I+G G + + K ID + G E++++K+ + N +
Sbjct: 14 TDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLDWAVRNLHEL 73
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WFLNR+KD G+ ++ ++L + D++ +KK+++ +G+RH GL+VRGQ
Sbjct: 74 A-PAWFLNRRKDPETGRDLHLI---GSELVLAAKRDVDLMKKLKSWKGVRHSLGLKVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
T TTGR G T GV+KKK
Sbjct: 130 RTVTTGRFGATAGVTKKK 147
>gi|325967787|ref|YP_004243979.1| 30S ribosomal protein S13 [Vulcanisaeta moutnovskia 768-28]
gi|323706990|gb|ADY00477.1| 30S ribosomal protein S13P [Vulcanisaeta moutnovskia 768-28]
Length = 158
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +ALT I+G G + + + I+ R G+ +E V K+ + N Q+
Sbjct: 14 TDLDGFKPVAYALTKIRGIGIPTAYAICRYLGINPLIRLGQLDDETVRKLDWAVRNLYQF 73
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WF+NR KD G+ +L A L ++D++ +KK+R+ +G+RH GL+VRGQ
Sbjct: 74 A-PGWFVNRPKDPETGRNVHLL---GADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVRGQ 129
Query: 123 HTKTTGRRGRTVGV 136
T+TTGR G TVGV
Sbjct: 130 RTRTTGRLGLTVGV 143
>gi|171185873|ref|YP_001794792.1| 30S ribosomal protein S13 [Pyrobaculum neutrophilum V24Sta]
gi|170935085|gb|ACB40346.1| ribosomal protein S13 [Pyrobaculum neutrophilum V24Sta]
Length = 153
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG ++V +AL I+G G + + K ID + G ++++++K+ + N +
Sbjct: 14 TDLDGNKQVAYALAKIRGIGIATAYAICWKLGIDPHAVLGMLTDDQINKLDWAVRNLNEL 73
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WFLNR+KD G+ ++ ++L ++D++ +KK+++ +G+RH GL+VRGQ
Sbjct: 74 A-PAWFLNRRKDPETGRELHLI---GSELVLAAKKDVDLMKKLKSWKGVRHSLGLKVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
T TTGR G T GV+KKK
Sbjct: 130 RTVTTGRFGATAGVTKKK 147
>gi|112799401|gb|ABI23025.1| SSU ribosomal protein S13AB [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
gi|255513949|gb|EET90214.1| ribosomal protein S13 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 177
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSN----IVLKKADIDLNKRAGECSEEEVDKIITIMTNP 59
+I+G + AL +KG G+ S+ ++ K +ID + G +E +V ++ ++ +P
Sbjct: 26 DINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQVTQVEELIKDP 85
Query: 60 RQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+Y +P + LNR+ D+ GK ++ L +R+ + R +R RG RH +G +V
Sbjct: 86 HKYGVPKYLLNRRNDMDTGKDMHLIGND---LIFAVRQSINRDVTLRVWRGYRHQYGQKV 142
Query: 120 RGQHTKTTGRRGRTVGVSKK 139
RGQHT++TGR G TVGV+KK
Sbjct: 143 RGQHTRSTGRTGATVGVTKK 162
>gi|70938520|ref|XP_739923.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56517276|emb|CAH87495.1| hypothetical protein PC302493.00.0 [Plasmodium chabaudi chabaudi]
Length = 50
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 46/48 (95%)
Query: 93 SKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
S LREDLER+KKIR HRG+RH+WGLRVRGQHTKTTGRRGRTVGV+KKK
Sbjct: 1 SYLREDLERMKKIRLHRGLRHHWGLRVRGQHTKTTGRRGRTVGVAKKK 48
>gi|145592095|ref|YP_001154097.1| 30S ribosomal protein S13 [Pyrobaculum arsenaticum DSM 13514]
gi|158706267|sp|A4WM28.1|RS13_PYRAR RecName: Full=30S ribosomal protein S13
gi|145283863|gb|ABP51445.1| SSU ribosomal protein S13P [Pyrobaculum arsenaticum DSM 13514]
Length = 152
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+++G ++V +AL I+G G + + K ID + G EE+++K+ + N +
Sbjct: 14 TDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAVRNLHEV 73
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WFLNR+KD G+ ++ ++L + D++ +KK+++ +G+RH GL+VRGQ
Sbjct: 74 A-PAWFLNRRKDPETGRDMHLI---GSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
T TTGR G GV+KKK
Sbjct: 130 RTVTTGRLGAVAGVTKKK 147
>gi|448630483|ref|ZP_21673138.1| 30S ribosomal protein S13P [Haloarcula vallismortis ATCC 29715]
gi|445756406|gb|EMA07781.1| 30S ribosomal protein S13P [Haloarcula vallismortis ATCC 29715]
Length = 177
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G G R + I+ +KAD+D G+ ++ +++++ + N
Sbjct: 29 TDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVDNVENFAD- 87
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P+W N QKD G+ + + L R+D+ R+K I ++RG+RH G +VRGQ
Sbjct: 88 EVPEWMANHQKDYFTGETTH---ETGNDLQLTCRQDINRMKMIDSYRGVRHKRGQKVRGQ 144
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 145 RTKSTGRTEGTIGVN 159
>gi|159041085|ref|YP_001540337.1| 30S ribosomal protein S13 [Caldivirga maquilingensis IC-167]
gi|157919920|gb|ABW01347.1| ribosomal protein S13 [Caldivirga maquilingensis IC-167]
Length = 162
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +AL IKG G + + + I+ + GE +EE + KI + N Q
Sbjct: 16 TDLDGSKAVAYALARIKGIGVSTAVAICRNLGINPLVKLGELNEEMIRKIDWAVRNLHQA 75
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WF+NR KD G+ ++ A L R D+ER ++I + RG+RH GL+VRGQ
Sbjct: 76 A-PAWFVNRPKDPETGRNIHLI---GADLILTARNDIERERRILSWRGIRHNLGLKVRGQ 131
Query: 123 HTKTTGRRGRTVGVSKKK 140
T+TTGR G GV +++
Sbjct: 132 RTRTTGRLGPVAGVQRRR 149
>gi|379003193|ref|YP_005258865.1| 30S ribosomal protein S13P [Pyrobaculum oguniense TE7]
gi|375158646|gb|AFA38258.1| archaeal ribosomal protein S13P [Pyrobaculum oguniense TE7]
Length = 152
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+++G ++V +AL I+G G + + K ID + G EE+++K+ + N +
Sbjct: 14 TDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAVRNLHEV 73
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WFLNR+KD G+ ++ ++L + D++ +KK+++ +G+RH GL+VRGQ
Sbjct: 74 A-PAWFLNRRKDPETGRDLHLI---GSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
Query: 123 HTKTTGRRGRTVGVSKKK 140
T TTGR G GV+KKK
Sbjct: 130 RTVTTGRFGAVAGVTKKK 147
>gi|383621937|ref|ZP_09948343.1| 30S ribosomal protein S13P [Halobiforma lacisalsi AJ5]
gi|448702862|ref|ZP_21700219.1| 30S ribosomal protein S13P [Halobiforma lacisalsi AJ5]
gi|445776955|gb|EMA27931.1| 30S ribosomal protein S13P [Halobiforma lacisalsi AJ5]
Length = 171
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +KA +D G ++ +D+++ ++ N
Sbjct: 24 TDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDDDVIDEVVELVENYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L+ + D+ R+K I ++RG+RH G +VRGQ
Sbjct: 83 EVPDWLNNRQSDFYSGETTHEI---GNDLELTRQHDINRMKMIDSYRGVRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|374325993|ref|YP_005084193.1| 30S ribosomal protein S13 [Pyrobaculum sp. 1860]
gi|356641262|gb|AET31941.1| 30S ribosomal protein S13P [Pyrobaculum sp. 1860]
Length = 149
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 81/138 (58%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+++G +V ++L IKG G + + K ID + G EE+++K+ + N +
Sbjct: 10 TDLNGGNEVAYSLAKIKGIGIATAYAICWKLGIDPHAILGALPEEQINKLDWAVRNLHEL 69
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P WFLNR+KD G+ ++ ++L + D++ KK+++ RG+RH GL+VRGQ
Sbjct: 70 A-PAWFLNRRKDPETGRDIHLI---GSELVLAAKRDVDLAKKLKSWRGVRHSLGLKVRGQ 125
Query: 123 HTKTTGRRGRTVGVSKKK 140
T TTGR G T GV+KKK
Sbjct: 126 RTVTTGRFGATAGVTKKK 143
>gi|344211107|ref|YP_004795427.1| 30S ribosomal protein S13P [Haloarcula hispanica ATCC 33960]
gi|448667523|ref|ZP_21686023.1| 30S ribosomal protein S13P [Haloarcula amylolytica JCM 13557]
gi|343782462|gb|AEM56439.1| 30S ribosomal protein S13P [Haloarcula hispanica ATCC 33960]
gi|445770091|gb|EMA21159.1| 30S ribosomal protein S13P [Haloarcula amylolytica JCM 13557]
Length = 177
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G G R + I+ +KAD+D G+ ++ +++++ + N
Sbjct: 29 TDLDGTKSVERALTELNGIGHRAARIITQKADVDRRAVFGKLDDDVIERVVDHVENFAD- 87
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P+W N QKD G+ + + L R+D+ R+K I ++RG+RH G +VRGQ
Sbjct: 88 EVPEWMANHQKDYFTGETTH---ETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVRGQ 144
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 145 RTKSTGRTEGTIGVN 159
>gi|320101541|ref|YP_004177133.1| 30S ribosomal protein S13 [Desulfurococcus mucosus DSM 2162]
gi|319753893|gb|ADV65651.1| SSU ribosomal protein S13P [Desulfurococcus mucosus DSM 2162]
Length = 162
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ T++DG+ +++ L+ +KG G FS V + +D +R G S++ V I ++ NP
Sbjct: 14 LETDVDGELPLVYGLSEVKGLGYAFSLAVCRVLGLDPRQRTGFLSDDTVKSIEEVVRNPG 73
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+Y IP W NR+KD G Q L ++A L ++ED+ER K+I++ RG+RH GL+V
Sbjct: 74 KYGIPAWIYNRRKDYATG---QDLHLTSANLIYYVKEDIEREKRIKSWRGIRHALGLKV 129
>gi|449704260|gb|EMD44537.1| 40S ribosomal protein S18, partial [Entamoeba histolytica KU27]
Length = 70
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DG+RKV +ALT IKGCGRR++ +V K+A ID+NKRAG + E++KI+ I+ NP
Sbjct: 6 NTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDILNNPLN 65
Query: 62 YKIP 65
YKIP
Sbjct: 66 YKIP 69
>gi|118576779|ref|YP_876522.1| 30S ribosomal protein S13 [Cenarchaeum symbiosum A]
gi|158706221|sp|A0RY01.1|RS13_CENSY RecName: Full=30S ribosomal protein S13
gi|118195300|gb|ABK78218.1| ribosomal protein S13 [Cenarchaeum symbiosum A]
Length = 227
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ ++ G++K + L I+G G F+ +L ID N G ++E+V I ++ +P
Sbjct: 58 LGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLLQDPA 117
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
P WFLNR+KD+ G+ I T+ ++ +R D+ER + + +G RH +GL+VR
Sbjct: 118 GAGFPTWFLNRRKDLETGEDRHIF---TSDIEFTVRNDVERERVSGSWKGYRHMFGLKVR 174
Query: 121 GQHTKTTGR 129
GQ T+ TGR
Sbjct: 175 GQRTRNTGR 183
>gi|241997536|ref|XP_002433417.1| 40S ribosomal protein S18, putative [Ixodes scapularis]
gi|215490840|gb|EEC00481.1| 40S ribosomal protein S18, putative [Ixodes scapularis]
Length = 150
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RKVMFALTAIKG GRRFSN+V KKAD+DLNKRAGE +EEE + + +
Sbjct: 16 LNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEATSHTWLEVHSK 75
Query: 61 QYKIP 65
++P
Sbjct: 76 WNRLP 80
>gi|15922391|ref|NP_378060.1| 30S ribosomal protein S13P [Sulfolobus tokodaii str. 7]
gi|32363379|sp|Q96YV7.1|RS13_SULTO RecName: Full=30S ribosomal protein S13
gi|15623180|dbj|BAB67169.1| 30S ribosomal protein S13P [Sulfolobus tokodaii str. 7]
Length = 172
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 75/121 (61%), Gaps = 3/121 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG KV +AL +KG G + ++ K +D ++R GE S+E++ KI +T+ + +
Sbjct: 17 DVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKIENYLTDKKILE 76
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P+W NR+KD G ++ T+ L +R D+ER KKI++ RG+RH GL+VRGQ
Sbjct: 77 VPNWMYNRRKDYESGIDMHLV---TSDLIFYVRNDIEREKKIKSWRGVRHSLGLKVRGQR 133
Query: 124 T 124
T
Sbjct: 134 T 134
>gi|55376996|ref|YP_134846.1| 30S ribosomal protein S13 [Haloarcula marismortui ATCC 43049]
gi|448640853|ref|ZP_21677640.1| 30S ribosomal protein S13P [Haloarcula sinaiiensis ATCC 33800]
gi|448651237|ref|ZP_21680306.1| 30S ribosomal protein S13P [Haloarcula californiae ATCC 33799]
gi|266965|sp|Q00861.1|RS13_HALMA RecName: Full=30S ribosomal protein S13; AltName: Full=HmaS13
gi|148770|gb|AAA73209.1| ribosomal protein HmaS13 [Haloarcula marismortui]
gi|55229721|gb|AAV45140.1| 30S ribosomal protein S13P [Haloarcula marismortui ATCC 43049]
gi|445761378|gb|EMA12626.1| 30S ribosomal protein S13P [Haloarcula sinaiiensis ATCC 33800]
gi|445770764|gb|EMA21822.1| 30S ribosomal protein S13P [Haloarcula californiae ATCC 33799]
Length = 177
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G G R + I+ +KAD+D G+ ++ +++++ + N
Sbjct: 29 TDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVERVENFAD- 87
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P+W N QKD G+ + + L R+D+ R+K I ++RG+RH G +VRGQ
Sbjct: 88 DVPEWMTNHQKDYFTGETTH---ETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVRGQ 144
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 145 RTKSTGRTEGTIGVN 159
>gi|409722498|ref|ZP_11269946.1| 30S ribosomal protein S13P [Halococcus hamelinensis 100A6]
gi|448724483|ref|ZP_21706990.1| 30S ribosomal protein S13P [Halococcus hamelinensis 100A6]
gi|445785800|gb|EMA36586.1| 30S ribosomal protein S13P [Halococcus hamelinensis 100A6]
Length = 169
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G GRR + I+ ++A++D G ++ VD II +
Sbjct: 26 TDLDGTKSVERALTGMNGVGRRTARIIAEQAEVDKTATLGRLDDDAVDAIIEGVEGLAD- 84
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P+W +NR KD G+ + + L ++D+ R++ I +++G+RH G +VRGQ
Sbjct: 85 EVPEWLVNRPKDYFSGEAAHEVGND---LSLTRQQDINRMQMISSYKGVRHNRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRSEGTIGVN 156
>gi|448678708|ref|ZP_21689715.1| 30S ribosomal protein S13P [Haloarcula argentinensis DSM 12282]
gi|445772695|gb|EMA23740.1| 30S ribosomal protein S13P [Haloarcula argentinensis DSM 12282]
Length = 177
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G G R + I+ +KAD+D G+ ++ +++++ + N
Sbjct: 29 TDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVDRVENFAD- 87
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P+W N QKD G+ + + L R+D+ R+K I ++RG+RH G +VRGQ
Sbjct: 88 DVPEWMTNHQKDYFTGETTH---ETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVRGQ 144
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 145 RTKSTGRTEGTIGVN 159
>gi|448391686|ref|ZP_21566781.1| 30S ribosomal protein S13P [Haloterrigena salina JCM 13891]
gi|445665098|gb|ELZ17776.1| 30S ribosomal protein S13P [Haloterrigena salina JCM 13891]
Length = 174
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +AD+D G ++ +D+++ + N +
Sbjct: 24 TDLDGTKTVERSLSELNGVGRRTARLIADEADVDRTATFGRLDDDIIDEVVETVENYAE- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G+RH G +VRGQ
Sbjct: 83 EVPDWLNNRQSDFYTGETTHEIGND---LQLTRQHDINRMKMIDSYKGVRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|145549051|ref|XP_001460205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428034|emb|CAK92808.1| unnamed protein product [Paramecium tetraurelia]
Length = 193
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 78/120 (65%), Gaps = 14/120 (11%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+++ + + +IKG GRRF+ + K ++L KRAGE ++EE KI ++
Sbjct: 18 LNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGELTDEEAHKITEVIKMVP 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHR--GMRHYWGLR 118
QY +D+ +GK ++ +T +L++KLREDLER+KKI+ + +RH+WGLR
Sbjct: 78 QYI---------RDLKNGKNYEV---TTNELETKLREDLERIKKIKYSQWLCLRHHWGLR 125
>gi|335433575|ref|ZP_08558395.1| 30S ribosomal protein S13P [Halorhabdus tiamatea SARL4B]
gi|334898581|gb|EGM36685.1| 30S ribosomal protein S13P [Halorhabdus tiamatea SARL4B]
Length = 176
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G G+R + I+ ADID + G ++E++ I+ +
Sbjct: 26 TDLDGTKSVERALTDMNGIGQRAARIIANDADIDRRETFGRLEDDEIEAIVERVEGFAD- 84
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P+W N + D DG+ + + L+ R+D+ R+K + A++G+RH G +VRGQ
Sbjct: 85 DVPEWLANHRNDFFDGETTHEIGND---LNLTRRQDINRMKMVNAYKGVRHKRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|448689121|ref|ZP_21694858.1| 30S ribosomal protein S13P [Haloarcula japonica DSM 6131]
gi|445778991|gb|EMA29933.1| 30S ribosomal protein S13P [Haloarcula japonica DSM 6131]
Length = 177
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G G R + I+ +KAD+D G+ ++ +++++ + N
Sbjct: 29 TDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVDHVENFAD- 87
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P W N QKD G+ + + L R+D+ R+K I ++RG+RH G +VRGQ
Sbjct: 88 EVPAWMTNHQKDYFTGETTH---ETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVRGQ 144
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 145 RTKSTGRTEGTIGVN 159
>gi|435847151|ref|YP_007309401.1| SSU ribosomal protein S13P [Natronococcus occultus SP4]
gi|433673419|gb|AGB37611.1| SSU ribosomal protein S13P [Natronococcus occultus SP4]
Length = 171
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +KA +D G E+ +D+++ ++ N
Sbjct: 23 TDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDEDVIDEVVELVENY-AA 81
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G+RH G +VRGQ
Sbjct: 82 EVPDWLNNRQHDFYTGETTHEI---GNDLQLTRQHDINRMKMIDSYKGVRHKRGQKVRGQ 138
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 139 RTKSTGRTEGTIGVN 153
>gi|448409406|ref|ZP_21574704.1| 30S ribosomal protein S13P [Halosimplex carlsbadense 2-9-1]
gi|445673009|gb|ELZ25576.1| 30S ribosomal protein S13P [Halosimplex carlsbadense 2-9-1]
Length = 174
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT + G G R + I+ ++A ID G+ E+++D+I+ ++ +
Sbjct: 25 TDLDGTKSVERSLTDMNGIGHRAARIIAEEAGIDRRAVFGKLDEDDIDEIVALVEGFAE- 83
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+ P+W +N + D G+ + + L+ R+D+ R+K I +++G+RH G +VRGQ
Sbjct: 84 EAPEWLVNHRNDFFAGEATH---ETGTDLEMSRRQDINRMKMINSYKGVRHKRGQKVRGQ 140
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 141 RTKSTGRSEGTIGVN 155
>gi|390939163|ref|YP_006402901.1| 30S ribosomal protein S13 [Desulfurococcus fermentans DSM 16532]
gi|390192270|gb|AFL67326.1| ribosomal protein S13P [Desulfurococcus fermentans DSM 16532]
Length = 162
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ T++DG+ +++ L+ +KG G FS + + ++ +R G S++ V I ++ NP
Sbjct: 14 LETDVDGELPLVYGLSEVKGLGYAFSLAICRILGLNPEQRVGFLSDDMVKSIEEVVRNPG 73
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+Y IP W NRQKD G Q L + A L ++ED+ER K++++ RG+RH GL+V
Sbjct: 74 KYGIPSWIYNRQKDYTTG---QNLHLTGANLVYYVKEDIEREKRVKSWRGIRHALGLKV 129
>gi|218884677|ref|YP_002429059.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n]
gi|218766293|gb|ACL11692.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n]
Length = 174
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ T++DG+ +++ L+ +KG G FS + + ++ +R G S++ V I ++ NP
Sbjct: 26 LETDVDGELPLVYGLSEVKGLGYTFSLAICRILGLNPEQRVGFLSDDVVKSIEEVVRNPG 85
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+Y IP W NRQKD G Q L + A L ++ED+ER K++++ RG+RH GL+V
Sbjct: 86 KYGIPSWIYNRQKDYTTG---QNLHLTGANLVYYVKEDIEREKRVKSWRGIRHALGLKV 141
>gi|448712000|ref|ZP_21701543.1| 30S ribosomal protein S13P [Halobiforma nitratireducens JCM 10879]
gi|445791085|gb|EMA41734.1| 30S ribosomal protein S13P [Halobiforma nitratireducens JCM 10879]
Length = 171
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + I+ ++A +D G ++ +D+++ ++ N
Sbjct: 24 TDLDGTKSVERSLSEMNGIGRRTARIIAEEAGVDRTATFGRLDDDVIDEVVELVENY-AA 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L+ + D+ R+K I +++G+RH G +VRGQ
Sbjct: 83 EVPDWLNNRQSDFYTGETTHEI---GNDLELTRQHDINRMKMIDSYKGVRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|284165825|ref|YP_003404104.1| 30S ribosomal protein S13P [Haloterrigena turkmenica DSM 5511]
gi|284015480|gb|ADB61431.1| ribosomal protein S13P [Haloterrigena turkmenica DSM 5511]
Length = 174
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +AD+D G ++ +D+++ + N +
Sbjct: 24 TDLDGTKTVERSLSELNGVGRRTARLIADEADVDRTATFGRLDDDIIDEVVETVENYAE- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 EVPDWLNNRQSDFYTGETTHEIGND---LQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|395846482|ref|XP_003795932.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Otolemur
garnettii]
gi|395846484|ref|XP_003795933.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Otolemur
garnettii]
Length = 77
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 51/62 (82%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG K+ FA+TAIKG GRR+++ VL+KADIDL KRA E +E+EV+++ITIM N
Sbjct: 16 LNTNIDGWWKIAFAITAIKGVGRRYAHAVLRKADIDLTKRARELTEDEVERVITIMQNLH 75
Query: 61 QY 62
QY
Sbjct: 76 QY 77
>gi|448348751|ref|ZP_21537599.1| 30S ribosomal protein S13P [Natrialba taiwanensis DSM 12281]
gi|448361738|ref|ZP_21550351.1| 30S ribosomal protein S13P [Natrialba asiatica DSM 12278]
gi|448368973|ref|ZP_21555740.1| 30S ribosomal protein S13P [Natrialba aegyptia DSM 13077]
gi|445642412|gb|ELY95480.1| 30S ribosomal protein S13P [Natrialba taiwanensis DSM 12281]
gi|445649418|gb|ELZ02355.1| 30S ribosomal protein S13P [Natrialba asiatica DSM 12278]
gi|445651516|gb|ELZ04424.1| 30S ribosomal protein S13P [Natrialba aegyptia DSM 13077]
Length = 172
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +KA +D G ++ +D++++++ N
Sbjct: 23 TDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDDDVIDEVVSLVENYAD- 81
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 82 EVPDWLNNRQHDFYTGETTHEI---GNDLQLSRQHDINRMKMIDSYKGTRHKRGQKVRGQ 138
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 139 RTKSTGRTEGTIGVN 153
>gi|448303013|ref|ZP_21492963.1| 30S ribosomal protein S13P [Natronorubrum sulfidifaciens JCM 14089]
gi|445594020|gb|ELY48187.1| 30S ribosomal protein S13P [Natronorubrum sulfidifaciens JCM 14089]
Length = 173
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +AD+D G ++ ++K++ I+ N
Sbjct: 24 TDLDGTKSVERSLSEMNGIGRRTARLIADEADVDRTATFGRLDDDVINKVVEIVENYAG- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 NVPDWLNNRQSDFYSGETTHEI---GNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|448385449|ref|ZP_21563955.1| 30S ribosomal protein S13P [Haloterrigena thermotolerans DSM 11522]
gi|445656944|gb|ELZ09776.1| 30S ribosomal protein S13P [Haloterrigena thermotolerans DSM 11522]
Length = 174
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT + G G R + ++ ++A +D G E+ +D+++ ++ N +
Sbjct: 24 TDLDGTKSVERSLTEMNGIGHRTARLIAEEAGVDRTDTFGRLDEDVIDEVVELVENYAE- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 EVPDWLNNRQDDFYSGETTHEI---GNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|433590974|ref|YP_007280470.1| archaeal ribosomal protein S13P [Natrinema pellirubrum DSM 15624]
gi|448334507|ref|ZP_21523682.1| 30S ribosomal protein S13P [Natrinema pellirubrum DSM 15624]
gi|433305754|gb|AGB31566.1| archaeal ribosomal protein S13P [Natrinema pellirubrum DSM 15624]
gi|445619839|gb|ELY73356.1| 30S ribosomal protein S13P [Natrinema pellirubrum DSM 15624]
Length = 175
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT + G G R + ++ ++A +D G E+ +D+++ ++ N +
Sbjct: 24 TDLDGTKSVERSLTEMNGIGHRTARLIAEEAGVDRTDTFGRLDEDVIDEVVELVENYAE- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 EVPDWLNNRQDDFYSGETTHEI---GNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|41615251|ref|NP_963749.1| 30S ribosomal protein S13P [Nanoarchaeum equitans Kin4-M]
gi|74579692|sp|Q74M95.1|RS13_NANEQ RecName: Full=30S ribosomal protein S13
gi|40068975|gb|AAR39310.1| NEQ467 [Nanoarchaeum equitans Kin4-M]
Length = 153
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++DG + + L + G F++ V ID ++ G S+EE++K+ + NP +Y
Sbjct: 19 VDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDALRNPWKY 78
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
IP W NR++D GK L+ + ++ + D++R +I + RG RH GL VRGQ
Sbjct: 79 GIPSWLYNRRRDPETGKDLH-LVGNDYKITMEF--DIKREMQINSWRGYRHREGLPVRGQ 135
Query: 123 HTKTTGRRGRTVGVSKKK 140
T++ R+GRTVGV KKK
Sbjct: 136 RTRSHHRKGRTVGVIKKK 153
>gi|76162952|gb|AAX30684.2| SJCHGC06893 protein [Schistosoma japonicum]
Length = 62
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/43 (88%), Positives = 43/43 (100%)
Query: 98 DLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
DLERLK++R+HRG+RHYWGLRVRGQHTKTTGRRGRTVGVS+KK
Sbjct: 20 DLERLKRMRSHRGIRHYWGLRVRGQHTKTTGRRGRTVGVSRKK 62
>gi|257053588|ref|YP_003131421.1| 30S ribosomal protein S13P [Halorhabdus utahensis DSM 12940]
gi|256692351|gb|ACV12688.1| ribosomal protein S13 [Halorhabdus utahensis DSM 12940]
Length = 176
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G G+R + I+ DID + G +++++ I+ +
Sbjct: 26 TDLDGTKSVERALTDMNGIGQRAARIIANDVDIDRRETFGRLEDDQIEAIVDRVEGFAD- 84
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P+W N + D DG+ + + T L R+D+ R+K I A++G+RH G +VRGQ
Sbjct: 85 DVPEWLANHRNDFFDGETTHEIGTD---LSLTRRQDINRMKMINAYKGVRHKRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|448346283|ref|ZP_21535169.1| 30S ribosomal protein S13P [Natrinema altunense JCM 12890]
gi|445632872|gb|ELY86078.1| 30S ribosomal protein S13P [Natrinema altunense JCM 12890]
Length = 174
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT + G GRR + ++ ++A +D G ++ +D +I ++ N
Sbjct: 24 TDLDGTKSVERSLTEMNGIGRRTARLIAEEAGVDRTATFGRLDDDVIDGVIEVVENYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 EVPDWLNNRQDDFYSGETTHEI---GNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|291334094|gb|ADD93766.1| putative ribosomal protein S13/S18 [uncultured marine bacterium
MedDCM-OCT-S05-C222]
Length = 155
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + + ALTA+KG G R + + K D AG S E+ + + + +
Sbjct: 22 TDMDGLKTLATALTAVKGVGPRTAIQICKNTGFDPASLAGHLSAEQQETLREAIEGYAE- 80
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W LNRQ+D+ G ++ LT Q+ +D+ RL+ ++ +RG+RH G +VRGQ
Sbjct: 81 TVPLWMLNRQRDLETG--DELHLTGQ-QVSLTFEDDINRLRTMKCYRGVRHASGNKVRGQ 137
Query: 123 HTKTTGRRGRTVGVSKKK 140
++ GR G T+GVS+KK
Sbjct: 138 RGRSNGRGGLTLGVSRKK 155
>gi|15897041|ref|NP_341646.1| 30S ribosomal protein S13 [Sulfolobus solfataricus P2]
gi|284173385|ref|ZP_06387354.1| 30S ribosomal protein S13P [Sulfolobus solfataricus 98/2]
gi|384433541|ref|YP_005642899.1| 30S ribosomal protein S13 [Sulfolobus solfataricus 98/2]
gi|2500459|sp|P95986.1|RS13_SULSO RecName: Full=30S ribosomal protein S13
gi|1707820|emb|CAA69528.1| ribosomal protein S18 [Sulfolobus solfataricus P2]
gi|13813206|gb|AAK40436.1| SSU ribosomal protein S13AB (rps13AB) [Sulfolobus solfataricus P2]
gi|261601695|gb|ACX91298.1| ribosomal protein S13P [Sulfolobus solfataricus 98/2]
Length = 165
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 86/137 (62%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG K+ +AL +KG G + +++K +D N R GE S+ EV K+ +++++
Sbjct: 15 DVDGTMKLPYALAMVKGIGYNTAKAIIRKLGMDPNARLGELSDAEVKKVESVISDHTIKG 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NR+KD G ++ T+ L +R D+ER KK R+ RG+RH GL+VRGQ
Sbjct: 75 LPSWLYNRRKDYESGLDLHLV---TSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVRGQR 131
Query: 124 TKTTGRRGRTVGVSKKK 140
T+TTGR G T+GV++KK
Sbjct: 132 TRTTGRTGMTIGVARKK 148
>gi|448306204|ref|ZP_21496113.1| 30S ribosomal protein S13P [Natronorubrum bangense JCM 10635]
gi|445598618|gb|ELY52673.1| 30S ribosomal protein S13P [Natronorubrum bangense JCM 10635]
Length = 173
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +AD+D G ++ ++ ++ I+ N
Sbjct: 24 TDLDGTKSVERSLSEMNGIGRRTARLIADEADVDRTATFGRLDDDVIENVVDIVEN-YAG 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 NVPDWLNNRQSDFYSGETTHEIGND---LQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|448378223|ref|ZP_21560697.1| 30S ribosomal protein S13P [Halovivax asiaticus JCM 14624]
gi|445654205|gb|ELZ07059.1| 30S ribosomal protein S13P [Halovivax asiaticus JCM 14624]
Length = 172
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G GRR + +V +A +D G ++ +D I++++ +
Sbjct: 24 TDLDGTKSVERALTGLDGIGRRTARLVASEAAVDRTATFGTLEQDTIDDIVSLVESLGD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+PDW NR D G+ I+ L ++D+ R+K I +++G RH G +VRGQ
Sbjct: 83 DLPDWLNNRPGDFYTGETEHIVGND---LGLTRQQDINRMKMIDSYKGARHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|146304895|ref|YP_001192211.1| 30S ribosomal protein S13 [Metallosphaera sedula DSM 5348]
gi|145703145|gb|ABP96287.1| SSU ribosomal protein S13P [Metallosphaera sedula DSM 5348]
Length = 165
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG K + L +KG G + ++L K +ID +KR GE ++ E+ KI ++ N +
Sbjct: 16 DVDGTMKAPYGLAMVKGIGYNTARVILMKLNIDKDKRLGELTDHELKKIEEMLANKKIES 75
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+P W NR+KDI G Q L T+ L +R D+ER KK+++ RG+RH GL+V
Sbjct: 76 LPAWIFNRRKDIESG---QDLHYVTSDLVFVVRNDIEREKKLKSWRGVRHSLGLKV 128
>gi|433638726|ref|YP_007284486.1| archaeal ribosomal protein S13P [Halovivax ruber XH-70]
gi|433290530|gb|AGB16353.1| archaeal ribosomal protein S13P [Halovivax ruber XH-70]
Length = 172
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G GRR + +V +A +D G ++ +D I++++ +
Sbjct: 24 TDLDGTKSVERALTGLDGIGRRTARLVASEAAVDRTATFGALEQDTIDDIVSLVESLGD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+PDW NR D G+ I+ L ++D+ R+K I +++G RH G +VRGQ
Sbjct: 83 DLPDWLNNRPGDFYTGETKHIVGND---LGLTRQQDINRMKMIDSYKGARHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|448337144|ref|ZP_21526226.1| 30S ribosomal protein S13P [Natrinema pallidum DSM 3751]
gi|445626490|gb|ELY79833.1| 30S ribosomal protein S13P [Natrinema pallidum DSM 3751]
Length = 174
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ ++A +D G ++ +D +I ++ N
Sbjct: 24 TDLDGTKSVERSLSEMNGIGRRTARLIAEEAGVDRTATFGRLDDDVIDGVIEVVENYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 EVPDWLNNRQDDFYSGETTHEI---GNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|448330849|ref|ZP_21520125.1| 30S ribosomal protein S13P [Natrinema versiforme JCM 10478]
gi|445610685|gb|ELY64454.1| 30S ribosomal protein S13P [Natrinema versiforme JCM 10478]
Length = 176
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ ++A +D G ++ +D +I ++ N
Sbjct: 24 TDLDGTKSVERSLSEMNGIGRRTARLIAEEAGVDRTATFGRLDDDVIDGVIEVVENYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 EVPDWLNNRQDDFYSGETTHEI---GNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|429192478|ref|YP_007178156.1| 30S ribosomal protein S13 [Natronobacterium gregoryi SP2]
gi|448325890|ref|ZP_21515268.1| 30S ribosomal protein S13P [Natronobacterium gregoryi SP2]
gi|429136696|gb|AFZ73707.1| archaeal ribosomal protein S13P [Natronobacterium gregoryi SP2]
gi|445613982|gb|ELY67667.1| 30S ribosomal protein S13P [Natronobacterium gregoryi SP2]
Length = 172
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + I+ +A ID G ++ +D+++ ++ +
Sbjct: 24 TDLDGTKSVERSLSEMTGIGRRTARIIADEAGIDRTATFGRLDDDVIDEVVELVESYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L+ + D+ R+K I +++G+RH G +VRGQ
Sbjct: 83 EVPDWLNNRQSDFYTGETTHEI---GNDLELTRQHDINRMKMIDSYKGVRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|330834006|ref|YP_004408734.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4]
gi|329566145|gb|AEB94250.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4]
Length = 163
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG KV + L IKG G + ++L K +ID ++R GE ++ E+ KI ++N R
Sbjct: 16 DVDGTMKVPYGLAMIKGIGYNTARVILMKLNIDKDRRLGELNDHELKKIEEFLSNKRLET 75
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+P W NR+KD+ G + T+ L +R D+ER KKI++ RG+RH GL+V
Sbjct: 76 LPSWMYNRRKDLETGLDMHYV---TSDLVFVVRNDIEREKKIKSWRGIRHSLGLKV 128
>gi|336252155|ref|YP_004595262.1| 30S ribosomal protein S13P [Halopiger xanaduensis SH-6]
gi|335336144|gb|AEH35383.1| ribosomal protein S13P [Halopiger xanaduensis SH-6]
Length = 173
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT + G G R + I+ ++A +D G ++ +D+++ ++ N
Sbjct: 24 TDLDGTKSVERSLTEMNGIGHRTARIIAQEAGVDRTATFGRLDDDVIDEVVELVENYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NR +D G+ + + L+ + D+ R+K I +++G+RH G +VRGQ
Sbjct: 83 EVPDWLNNRPEDFYTGETTHEI---GNDLELTRQHDINRMKMIDSYKGVRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|322369537|ref|ZP_08044102.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253]
gi|320551269|gb|EFW92918.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253]
Length = 168
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + IV ++AD+D G ++++++++ + N
Sbjct: 22 TDLDGTKTVERSLSEMNGIGRRTARIVAEEADVDRKATFGRLDDDDIERVVEAVENYAD- 80
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P W N +K+ G+ + + L R DL R++ I +++G+RH G +VRGQ
Sbjct: 81 EVPAWLTNHRKEYFSGETTH---ETGNDLSMSRRRDLNRMQMIDSYKGVRHKRGQKVRGQ 137
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 138 RTKSTGRTEGTIGVN 152
>gi|448727626|ref|ZP_21709975.1| 30S ribosomal protein S13P [Halococcus morrhuae DSM 1307]
gi|445789612|gb|EMA40291.1| 30S ribosomal protein S13P [Halococcus morrhuae DSM 1307]
Length = 172
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G GRR + I+ ++A+ID G +++V+ I+ +
Sbjct: 27 TDLDGTKSVERALTGMNGVGRRTARIIAEQAEIDRTATLGRLDDDDVESIVEHVEG-FAS 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W NR D G+ S + L ++D+ R++ I +++G+RH G +VRGQ
Sbjct: 86 DVPAWLTNRPNDYFTGESSHEVGND---LSLTRQQDINRMQMISSYKGVRHERGQKVRGQ 142
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 RTKSTGRSEGTIGVN 157
>gi|15790213|ref|NP_280037.1| 30S ribosomal protein S13 [Halobacterium sp. NRC-1]
gi|169235942|ref|YP_001689142.1| 30S ribosomal protein S13P [Halobacterium salinarum R1]
gi|13124533|sp|Q9V2W4.1|RS13_HALSA RecName: Full=30S ribosomal protein S13; AltName: Full=HS13
gi|6172227|dbj|BAA85895.1| ribosomal protein HS13 [Halobacterium salinarum]
gi|10580671|gb|AAG19517.1| 30S ribosomal protein S13P [Halobacterium sp. NRC-1]
gi|167727008|emb|CAP13794.1| 30S ribosomal protein S13 [Halobacterium salinarum R1]
Length = 171
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V AL + G GRR + IV +A +D G ++ ++ + + + ++
Sbjct: 22 TDLDGTKTVERALAELGGVGRRVARIVADEAGVDRTATMGGLEDDAIESVTDAVDSFTEH 81
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P W NRQ D G+ I T ++ +D+ R++ IR+++G+RH G +VRGQ
Sbjct: 82 A-PAWLANRQNDFYTGENQHITGTD---VELTRDQDINRMRMIRSYKGIRHERGQKVRGQ 137
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 138 RTKSTGRTEGTIGVN 152
>gi|397772867|ref|YP_006540413.1| ribosomal protein S13P [Natrinema sp. J7-2]
gi|448340552|ref|ZP_21529523.1| 30S ribosomal protein S13P [Natrinema gari JCM 14663]
gi|397681960|gb|AFO56337.1| ribosomal protein S13P [Natrinema sp. J7-2]
gi|445629985|gb|ELY83255.1| 30S ribosomal protein S13P [Natrinema gari JCM 14663]
Length = 174
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ ++A +D G ++ +D +I ++ N
Sbjct: 24 TDLDGTKSVERSLSEMNGIGRRTARLIAEEAGVDRTATFGRLDDDVIDGVIEVVENYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P+W NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 EVPNWLNNRQDDFYSGETTHEI---GNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|302348809|ref|YP_003816447.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15]
gi|302329221|gb|ADL19416.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15]
Length = 173
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+T+I G+ V++ L+ IKG G + + +K ID R G + + ++ + + +
Sbjct: 17 NTDIPGEDTVIYGLSRIKGIGYATALAIARKLGIDPTARIGYLQPDVIKRLEDAVNDLTR 76
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+P W NR+KD G+ ++ A+L R D++R KI + RG+RH G +VRG
Sbjct: 77 LSLPSWLYNRRKDYESGQDKHLV---GAELIFVARRDIDREIKIGSWRGVRHKLGYKVRG 133
Query: 122 QHTKTTGRRGRTVGVSK 138
Q T TTGR G TVGV +
Sbjct: 134 QKTHTTGRTGMTVGVKR 150
>gi|448739231|ref|ZP_21721246.1| 30S ribosomal protein S13P [Halococcus thailandensis JCM 13552]
gi|445799826|gb|EMA50195.1| 30S ribosomal protein S13P [Halococcus thailandensis JCM 13552]
Length = 172
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G GRR + I+ ++A+ID G + +V+ I+ + +
Sbjct: 27 TDLDGTKSVERALTGMNGVGRRTARIIAEQAEIDRTAILGRLDDTDVESIVERVEEFAE- 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W NR D G+ S + L ++D+ R++ I +++G+RH G +VRGQ
Sbjct: 86 DVPAWLTNRPNDYFTGEASHEVGND---LSLTRQQDINRMQMISSYKGVRHERGQKVRGQ 142
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 RTKSTGRSEGTIGVN 157
>gi|257388629|ref|YP_003178402.1| 30S ribosomal protein S13 [Halomicrobium mukohataei DSM 12286]
gi|257170936|gb|ACV48695.1| ribosomal protein S13 [Halomicrobium mukohataei DSM 12286]
Length = 178
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +LT + G G+R + I+ +KA +D G +E+++ ++ +
Sbjct: 26 TDLDGTKSVERSLTDMNGIGKRAARIIAEKAGVDRQALFGALDDEDIEAVVEKVEGYAD- 84
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P+W N Q D G+ + + L + R D+ R++ I +++G+RH G +VRGQ
Sbjct: 85 EVPEWLTNHQNDFYSGETTHEIGND---LQMQRRADVNRMQMIDSYKGVRHKRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|374723642|gb|EHR75722.1| Ribosomal protein S13 [uncultured marine group II euryarchaeote]
Length = 155
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + + ALT++KG G R + + K + AG S EE + + +
Sbjct: 22 TDMDGLKTLSTALTSVKGVGPRTAVQICKNTGFSPSSLAGHLSVEE-QETLRLAIEGYAE 80
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W LNRQ+D+ G ++ LT Q+ L++D++RL+ ++ +RG+RH G +VRGQ
Sbjct: 81 TVPLWMLNRQRDLETG--DELHLTG-QQVMLTLKDDIDRLRTMKCYRGVRHASGNKVRGQ 137
Query: 123 HTKTTGRRGRTVGVSKKK 140
++ GR G T+GV + K
Sbjct: 138 RGRSNGRGGLTLGVKRSK 155
>gi|444728496|gb|ELW68953.1| 40S ribosomal protein S18 [Tupaia chinensis]
Length = 87
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Query: 58 NPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGL 117
N QYKI DW+ NRQK + D KYSQ+L T LD+KLREDLERLKKIR HR + H+WGL
Sbjct: 29 NLHQYKILDWYSNRQKVVKDRKYSQVL---TDSLDNKLREDLERLKKIRVHRVLCHFWGL 85
Query: 118 RV 119
+
Sbjct: 86 QF 87
>gi|300711114|ref|YP_003736928.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3]
gi|448296787|ref|ZP_21486838.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3]
gi|299124797|gb|ADJ15136.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3]
gi|445580770|gb|ELY35144.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3]
Length = 168
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + I+ + A I G ++E+D I+ + +
Sbjct: 26 TDLDGTKTVERSLSEMNGIGRRAARIIAQNAGISRTATFGRLEDDEIDAIVEEVEGFAEN 85
Query: 63 KIPDWFLNRQKDIVDGKY-SQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
P+W N Q G Y +I + L+ R+D+ RL+ I A+RG+RH G +VRG
Sbjct: 86 N-PEWLANHQ-----GYYDGEITHETGNDLELTRRQDINRLQMISAYRGVRHQRGQKVRG 139
Query: 122 QHTKTTGRRGRTVGVS 137
Q T++TGR T+GV+
Sbjct: 140 QRTRSTGRSEGTIGVN 155
>gi|308463479|ref|XP_003094013.1| hypothetical protein CRE_16394 [Caenorhabditis remanei]
gi|308248676|gb|EFO92628.1| hypothetical protein CRE_16394 [Caenorhabditis remanei]
Length = 516
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%), Gaps = 3/56 (5%)
Query: 31 KKADIDLNKRAGECSEEEVDKIITI---MTNPRQYKIPDWFLNRQKDIVDGKYSQI 83
+KAD+D+NKRAGE S+E+ DKI+TI M NP QYKIP+WFLNRQK I +GK Q+
Sbjct: 45 RKADVDVNKRAGELSKEDFDKIVTICKIMQNPFQYKIPNWFLNRQKVIKNGKTGQV 100
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 56 MTNPRQYKIPDWFLNRQKDIVDGKYSQILLTST 88
M NP QYKIP+WFLNRQK I GK Q+L T+
Sbjct: 1 MQNPSQYKIPNWFLNRQKGIEYGKTGQLLSTAV 33
>gi|119719177|ref|YP_919672.1| 30S ribosomal protein S13P [Thermofilum pendens Hrk 5]
gi|158706292|sp|A1RWT9.1|RS13_THEPD RecName: Full=30S ribosomal protein S13
gi|119524297|gb|ABL77669.1| SSU ribosomal protein S13P [Thermofilum pendens Hrk 5]
Length = 157
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 3/139 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++ G + +++AL IKG G + V KK +D + G SEEEV+K+ + +
Sbjct: 13 GVDLPGDKALVYALADIKGIGVSTAQAVAKKLGLDPYRLLGTLSEEEVEKLSAALREIEK 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+P W LNR+KD G ++ T+ L +R D+E +KKI++++G+RH GL+VRG
Sbjct: 73 LGLPPWMLNRRKDPFLGVDRHLI---TSDLLITVRNDIEFMKKIKSYKGVRHMLGLKVRG 129
Query: 122 QHTKTTGRRGRTVGVSKKK 140
Q T+TTGR G TVGV + K
Sbjct: 130 QRTRTTGRTGLTVGVKRGK 148
>gi|374633840|ref|ZP_09706205.1| archaeal ribosomal protein S13P [Metallosphaera yellowstonensis
MK1]
gi|373523628|gb|EHP68548.1| archaeal ribosomal protein S13P [Metallosphaera yellowstonensis
MK1]
Length = 164
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG K + L +KG G + +L K +ID +KR GE ++ E+ K+ ++ + R
Sbjct: 16 DVDGTMKAPYGLAMVKGIGYNTARAILMKLNIDKDKRLGELTDHELKKVEEMLASKRIEA 75
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+P W NR+KD+ G+ L T++L +R D+ER KK ++ RG+RH GL+V
Sbjct: 76 LPTWMFNRRKDLETGR---DLHYVTSELVFLVRNDIEREKKTKSWRGVRHSLGLKV 128
>gi|389860850|ref|YP_006363090.1| 30S ribosomal protein S13 [Thermogladius cellulolyticus 1633]
gi|388525754|gb|AFK50952.1| 30S ribosomal protein S13P [Thermogladius cellulolyticus 1633]
Length = 156
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
++DG ++ L IKG G F+ V + + + + G +EEEV KI ++++ P +
Sbjct: 13 GVDVDGNLSLVHGLAEIKGVGLNFALGVSRVLRFNPDMKIGFLTEEEVKKIESVISAPEK 72
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IP W NR+KD G+ ++ +L ++ED+ER K+I++ RG+RH GL+VRG
Sbjct: 73 HGIPAWMYNRRKDFATGRNVHLV---GNELIFFVKEDIEREKRIKSWRGIRHSLGLKVRG 129
Query: 122 QHTKTTGRRGRTVGV 136
Q T+TTGR G TVGV
Sbjct: 130 QRTRTTGRTGMTVGV 144
>gi|332796349|ref|YP_004457849.1| 30S ribosomal protein S13 [Acidianus hospitalis W1]
gi|332694084|gb|AEE93551.1| ribosomal protein S13 [Acidianus hospitalis W1]
Length = 168
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG KV +AL +KG G + ++++ ID ++R GE S+ E+ KI +++
Sbjct: 15 DVDGTMKVPYALAMVKGIGYNTARAIVRQLGIDKDRRLGELSDSELKKIEEALSDKTIKG 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+P W LNR+KD G ++ T++L R D+ER KKI++ RG+RH GL+V
Sbjct: 75 LPTWMLNRRKDYESGLDLHLV---TSELIFYARNDIEREKKIKSWRGVRHSLGLKV 127
>gi|270313043|gb|ACZ73603.1| ribosomal protein 18S [Apodemus flavicollis]
Length = 45
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 38/41 (92%)
Query: 44 CSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQIL 84
+E+EV+++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+L
Sbjct: 1 LTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVL 41
>gi|227828304|ref|YP_002830084.1| 30S ribosomal protein S13 [Sulfolobus islandicus M.14.25]
gi|227460100|gb|ACP38786.1| ribosomal protein S13 [Sulfolobus islandicus M.14.25]
Length = 166
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG K+ +AL +KG G + ++ K +D N R GE S+ ++ K+ +++++
Sbjct: 15 DVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVLSDHAIKG 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NR+KD G ++ T+ L +R D+ER KK R+ RG+RH GL+VRGQ
Sbjct: 75 LPSWLYNRRKDYESGLDLHLV---TSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVRGQR 131
Query: 124 TKTTGRRGRTVGVSK 138
T+TTGR G T+GV++
Sbjct: 132 TRTTGRTGMTIGVAR 146
>gi|269986619|gb|EEZ92901.1| ribosomal protein S13 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 179
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 82/143 (57%), Gaps = 8/143 (5%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG +KV L +I G G +SN ++K I ++ + E++++++ ++NP +Y
Sbjct: 32 TDLDGSKKVKDLLRSITGIGFSYSNALMKVLKIPEGEKLQDLDEKQLNELKEALSNPFKY 91
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+P W N ++D G +L + +L SK ++++K R+++G RH + ++RGQ
Sbjct: 92 KLPHWLFNWRRDETTGLDYHLL---SNELRSKTTMQIQKIKTSRSYKGYRHSFSYKLRGQ 148
Query: 123 HTKT-----TGRRGRTVGVSKKK 140
++ GR G ++GV +KK
Sbjct: 149 KVRSRGANVHGRVGSSLGVVRKK 171
>gi|448298702|ref|ZP_21488729.1| 30S ribosomal protein S13P [Natronorubrum tibetense GA33]
gi|445591004|gb|ELY45215.1| 30S ribosomal protein S13P [Natronorubrum tibetense GA33]
Length = 174
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +A +D G ++ ++ ++ + N
Sbjct: 24 TDLDGTKSVERSLSEMNGIGRRTARLIADEAGVDRTATFGRLDDDVIETVVEQVENYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P+W NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 EVPEWLANRQSDFYTGETTHEIGND---LQLTRQHDINRMKMIDSYKGSRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|227831062|ref|YP_002832842.1| 30S ribosomal protein S13 [Sulfolobus islandicus L.S.2.15]
gi|227457510|gb|ACP36197.1| ribosomal protein S13 [Sulfolobus islandicus L.S.2.15]
Length = 166
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG K+ +AL +KG G + ++ K +D N R GE S+ ++ K+ +++++
Sbjct: 15 DVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVISDHAIKG 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NR+KD G ++ T+ L +R D+ER KK R+ RG+RH GL+VRGQ
Sbjct: 75 LPSWLYNRRKDYESGLDLHLV---TSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVRGQR 131
Query: 124 TKTTGRRGRTVGVSK 138
T+TTGR G T+GV++
Sbjct: 132 TRTTGRTGMTIGVAR 146
>gi|229579943|ref|YP_002838342.1| 30S ribosomal protein S13 [Sulfolobus islandicus Y.G.57.14]
gi|229581396|ref|YP_002839795.1| 30S ribosomal protein S13 [Sulfolobus islandicus Y.N.15.51]
gi|229585534|ref|YP_002844036.1| 30S ribosomal protein S13 [Sulfolobus islandicus M.16.27]
gi|238620496|ref|YP_002915322.1| 30S ribosomal protein S13 [Sulfolobus islandicus M.16.4]
gi|284998558|ref|YP_003420326.1| 30S ribosomal protein S13 [Sulfolobus islandicus L.D.8.5]
gi|385773984|ref|YP_005646551.1| 30S ribosomal protein S13 [Sulfolobus islandicus HVE10/4]
gi|385776626|ref|YP_005649194.1| 30S ribosomal protein S13 [Sulfolobus islandicus REY15A]
gi|228010658|gb|ACP46420.1| ribosomal protein S13 [Sulfolobus islandicus Y.G.57.14]
gi|228012112|gb|ACP47873.1| ribosomal protein S13 [Sulfolobus islandicus Y.N.15.51]
gi|228020584|gb|ACP55991.1| ribosomal protein S13 [Sulfolobus islandicus M.16.27]
gi|238381566|gb|ACR42654.1| ribosomal protein S13 [Sulfolobus islandicus M.16.4]
gi|284446454|gb|ADB87956.1| ribosomal protein S13 [Sulfolobus islandicus L.D.8.5]
gi|323475374|gb|ADX85980.1| ribosomal protein S13 [Sulfolobus islandicus REY15A]
gi|323478099|gb|ADX83337.1| ribosomal protein S13 [Sulfolobus islandicus HVE10/4]
Length = 166
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG K+ +AL +KG G + ++ K +D N R GE S+ ++ K+ +++++
Sbjct: 15 DVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVISDHAIKG 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+P W NR+KD G ++ T+ L +R D+ER KK R+ RG+RH GL+VRGQ
Sbjct: 75 LPSWLYNRRKDYESGLDLHLV---TSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVRGQR 131
Query: 124 TKTTGRRGRTVGVSK 138
T+TTGR G T+GV++
Sbjct: 132 TRTTGRTGMTIGVAR 146
>gi|354610858|ref|ZP_09028814.1| ribosomal protein S13P [Halobacterium sp. DL1]
gi|353195678|gb|EHB61180.1| ribosomal protein S13P [Halobacterium sp. DL1]
Length = 171
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V AL + G GRR + ++ + ++ + G ++++D + + ++
Sbjct: 22 TDLDGTKTVERALAELDGVGRRVARVIADDSGVNRSATIGRLDDDDIDSVKEAVDGFTEH 81
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W NR+ D G+ I + L +D+ R++ IR+++G+RH G +VRGQ
Sbjct: 82 A-PEWLANRRNDFYSGETRHI---TGNDLGLTRDQDINRMRMIRSYKGIRHERGQKVRGQ 137
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 138 RTKSTGRTEGTIGVN 152
>gi|290559361|gb|EFD92694.1| ribosomal protein S13 [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 179
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V L +I G +SN ++K +I K+ + E+E++ + +++P +Y
Sbjct: 33 TDLDGSKAVKDLLRSIPGISFSYSNALMKVLNIPKGKKLQDLDEKELNTLKEALSDPFKY 92
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KIP W N ++D G +L + L SK ++++K R++RG RH + ++RGQ
Sbjct: 93 KIPHWLFNWRRDDETGLDYHLL---SNDLRSKTTMRIQKIKTSRSYRGYRHSFNYKLRGQ 149
Query: 123 HTKT-----TGRRGRTVGVSKKK 140
K+ GR G ++GV KKK
Sbjct: 150 KVKSRGANVHGRVGSSLGVVKKK 172
>gi|313126020|ref|YP_004036290.1| 30S ribosomal protein S13 [Halogeometricum borinquense DSM 11551]
gi|448285860|ref|ZP_21477099.1| 30S ribosomal protein S13P [Halogeometricum borinquense DSM 11551]
gi|312292385|gb|ADQ66845.1| SSU ribosomal protein S13P [Halogeometricum borinquense DSM 11551]
gi|445575890|gb|ELY30353.1| 30S ribosomal protein S13P [Halogeometricum borinquense DSM 11551]
Length = 172
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ +KG G+R + IV A +D + G ++++D ++ ++ N +
Sbjct: 26 TDLDGTKTVERSLSDMKGIGKRTARIVADAAGVDRTETFGLLDQDDIDAVVDVVENFNDH 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
P+W +NR+ D G+ + + + L+ K R D+ R+K I +++G+RH G +VRGQ
Sbjct: 86 -APEWMINRRDDFYTGETTH---KTGSDLEQKRRHDINRMKMINSYKGVRHKRGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRTEGTIGVN 156
>gi|70605930|ref|YP_254800.1| 30S ribosomal protein S13 [Sulfolobus acidocaldarius DSM 639]
gi|449066122|ref|YP_007433204.1| 30S ribosomal protein S13P [Sulfolobus acidocaldarius N8]
gi|449068398|ref|YP_007435479.1| 30S ribosomal protein S13P [Sulfolobus acidocaldarius Ron12/I]
gi|73920772|sp|P39470.2|RS13_SULAC RecName: Full=30S ribosomal protein S13
gi|68566578|gb|AAY79507.1| 30S ribosomal protein S13P [Sulfolobus acidocaldarius DSM 639]
gi|449034630|gb|AGE70056.1| 30S ribosomal protein S13P [Sulfolobus acidocaldarius N8]
gi|449036906|gb|AGE72331.1| 30S ribosomal protein S13P [Sulfolobus acidocaldarius Ron12/I]
Length = 170
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG K+ +AL IKG G + I+++K ++D +KR GE S+E++ KI ++ N +
Sbjct: 16 DVDGTMKLPYALAMIKGIGYNTAMIIIRKLNLDKDKRLGEISDEDIKKIENLLNNKIIPE 75
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
P+W NRQKD G ++ T+ L +R D+ER ++ R+ RG+RH GL+VRGQ
Sbjct: 76 SPNWIYNRQKDYESGADMHLV---TSDLIFYVRNDIERERRSRSWRGVRHSLGLKVRGQR 132
Query: 124 TKTTGRRGRTVGVSKKK 140
T+TTGR G T+GV + K
Sbjct: 133 TRTTGRTGATIGVRRAK 149
>gi|326559176|gb|ADZ95627.1| 40S ribosomal protein S18 [Nosema bombycis]
gi|326559178|gb|ADZ95628.1| 40S ribosomal protein S18 [Nosema bombycis]
Length = 115
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 24 RFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQI 83
R S + K+ + L +RAGE S EE++KI + +P+ IP F N +++ VDG + +
Sbjct: 2 RMSTAICKRTGVGLTRRAGELSNEELEKIQNAILDPKSVGIPVEFFNYRRNPVDGTDTHL 61
Query: 84 LLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
+ T +LD++ R LER KKIR R R GL+V GQ +K+ GR R + ++K
Sbjct: 62 VST---KLDAEYRLMLERGKKIRHVRLCRIACGLKVHGQRSKSNGRHIRAGMIFRRK 115
>gi|283771402|gb|ADB28936.1| ribosomal protein S18 [Delomys sublineatus]
Length = 45
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 38/40 (95%)
Query: 45 SEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQIL 84
+E+EV++++TIM NPRQYKIPDWFLNRQKD+ DGKYSQ+L
Sbjct: 2 TEDEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVL 41
>gi|344242913|gb|EGV99016.1| 40S ribosomal protein S18 [Cricetulus griseus]
Length = 87
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNP 59
+ TNI +RK+ A+T KG G+R +++VL+KADI+L KRAGE +E+EV+++ TIM NP
Sbjct: 29 LDTNIHARRKIAIAITVTKGAGQRQAHVVLRKADINLTKRAGEPTEDEVERVTTIMQNP 87
>gi|414883710|tpg|DAA59724.1| TPA: hypothetical protein ZEAMMB73_021781 [Zea mays]
Length = 60
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 40/45 (88%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECS 45
++TN+DGK+K+MFALT+IKG G FSNIV KKA+ID+NK+AGE S
Sbjct: 16 LNTNVDGKQKIMFALTSIKGVGHHFSNIVCKKANIDMNKQAGELS 60
>gi|448317561|ref|ZP_21507111.1| 30S ribosomal protein S13P [Natronococcus jeotgali DSM 18795]
gi|445602952|gb|ELY56922.1| 30S ribosomal protein S13P [Natronococcus jeotgali DSM 18795]
Length = 171
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ +KA +D G ++ +D+++ ++ +
Sbjct: 23 TDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDDDVIDEVVEVVESYAD- 81
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I ++RG+RH G +VRGQ
Sbjct: 82 EVPDWLNNRQHDFYTGETTHEI---GNDLQLTRQHDINRMKMIDSYRGVRHKRGQKVRGQ 138
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 139 RTKSTGRTEGTIGVN 153
>gi|448400358|ref|ZP_21571350.1| 30S ribosomal protein S13P [Haloterrigena limicola JCM 13563]
gi|445667381|gb|ELZ20024.1| 30S ribosomal protein S13P [Haloterrigena limicola JCM 13563]
Length = 173
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + ++ ++A +D G ++ +D+++ ++ N
Sbjct: 24 TDLDGTKSVERSLSEMNGIGRRTARLIAEEAGVDRTATFGRLDDDVIDEVVEVVENYAN- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++PDW NRQ D G+ + + L + D+ R+K I +++G RH G +VRGQ
Sbjct: 83 EVPDWLNNRQSDFYTGETTHEI---GNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|448314287|ref|ZP_21503987.1| 30S ribosomal protein S13P [Natronolimnobius innermongolicus JCM
12255]
gi|445595547|gb|ELY49653.1| 30S ribosomal protein S13P [Natronolimnobius innermongolicus JCM
12255]
Length = 173
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V +L+ + G GRR + I+ +A +D G ++ +D ++ ++ N
Sbjct: 24 TDLDGTKSVERSLSELNGVGRRTARIIADEAGVDRTATFGRLDDDVIDDVVEVVENYAD- 82
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++P+W NRQ D G+ + + L + D+ R+K I +++G+RH G +VRGQ
Sbjct: 83 EVPEWLTNRQGDFYTGETTHEIGND---LQLTRQHDINRMKMIDSYKGVRHKRGQKVRGQ 139
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 140 RTKSTGRTEGTIGVN 154
>gi|373458325|ref|ZP_09550092.1| 30S ribosomal protein S13 [Caldithrix abyssi DSM 13497]
gi|371719989|gb|EHO41760.1| 30S ribosomal protein S13 [Caldithrix abyssi DSM 13497]
Length = 123
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V+ LT I G GR + +L A +D NKR + S+E++ KI TI+ N +YK+
Sbjct: 13 KRVVIGLTYIYGIGRSSAEKILSDAGVDENKRVKDLSDEDIRKIRTIIQN--EYKVE--- 67
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L +++ +++RL I +RG+RHY GL VRGQ TKT
Sbjct: 68 --------------------GALKAEVNMNIKRLMDINCYRGIRHYRGLPVRGQRTKTNA 107
Query: 129 R----RGRTVGVSKKK 140
R R R+VG KKK
Sbjct: 108 RTRKGRKRSVGAKKKK 123
>gi|224284395|gb|ACN39932.1| unknown [Picea sitchensis]
Length = 89
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 34/35 (97%)
Query: 106 RAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
R HRG+RHYWGLRVRGQHTKTTGRRG+TVGVSKK+
Sbjct: 55 RNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 89
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 37/40 (92%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKR 40
++TN+DG++K+MFALT+IKG GRR +N+V KKAD+D+NKR
Sbjct: 16 LNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKR 55
>gi|448728473|ref|ZP_21710801.1| 30S ribosomal protein S13P [Halococcus saccharolyticus DSM 5350]
gi|445796955|gb|EMA47440.1| 30S ribosomal protein S13P [Halococcus saccharolyticus DSM 5350]
Length = 171
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G GRR + I+ +AD+D G ++ VD II + +
Sbjct: 26 TDLDGTKSVERALTGMNGVGRRAARIIAAEADVDRTATLGRLDDDAVDSIIEHVEGFAE- 84
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W NR D G+ + + L ++D+ R++ I +++G+RH G +VRGQ
Sbjct: 85 DVPAWLTNRPTDYFTGETTHEVGND---LSLTRQQDINRMQMISSYKGVRHERGQKVRGQ 141
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 142 RTKSTGRSEGTIGVN 156
>gi|449702094|gb|EMD42794.1| Hypothetical protein EHI5A_024920 [Entamoeba histolytica KU27]
Length = 38
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 35/36 (97%)
Query: 105 IRAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
+RAHRG+RHYWGLRVRGQHTKTTGRRGRTVGVS+ K
Sbjct: 1 MRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSRTK 36
>gi|88854001|gb|ABD52729.1| ribosomal protein S18 [Ovis aries]
Length = 44
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/46 (78%), Positives = 39/46 (84%), Gaps = 3/46 (6%)
Query: 58 NPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLK 103
NPRQYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLK
Sbjct: 2 NPRQYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLK 44
>gi|413932827|gb|AFW67378.1| hypothetical protein ZEAMMB73_334053 [Zea mays]
Length = 70
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKR-AGECSEEEV 49
++TN+DGK+K+MFA+T+IKG GRRFSNIV KKADID+NKR A S +++
Sbjct: 16 LNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRQASRFSSKDI 65
>gi|385809520|ref|YP_005845916.1| 30S ribosomal protein S13 [Ignavibacterium album JCM 16511]
gi|383801568|gb|AFH48648.1| Ribosomal protein S13 [Ignavibacterium album JCM 16511]
Length = 128
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+K+++ L I G GR + +L+KA++D NK+ GE EEEV +I +++T YK+
Sbjct: 14 KKILYGLQYIYGIGRSTAAEILQKANVDPNKKVGELHEEEVAQIRSVITA--DYKV---- 67
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L S+++++++RL I A+RG+RH GL VRGQ T+T
Sbjct: 68 -------------------EGALRSEVQQNIKRLMDIGAYRGLRHRRGLPVRGQRTRTNS 108
Query: 129 R 129
R
Sbjct: 109 R 109
>gi|448733730|ref|ZP_21715972.1| 30S ribosomal protein S13P [Halococcus salifodinae DSM 8989]
gi|445802250|gb|EMA52557.1| 30S ribosomal protein S13P [Halococcus salifodinae DSM 8989]
Length = 172
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T++DG + V ALT + G GRR + I+ +A++D + G ++ VD II + +
Sbjct: 27 TDLDGTKSVERALTGMNGVGRRAARIIAAEAEVDRSATLGRLDDDAVDSIIEHVEGFAE- 85
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+P W NR D G+ + + L ++D+ R++ I +++G+RH G +VRGQ
Sbjct: 86 DVPAWLTNRPADYFTGETTHEVGND---LSLTRQQDINRMQMISSYKGVRHERGQKVRGQ 142
Query: 123 HTKTTGRRGRTVGVS 137
TK+TGR T+GV+
Sbjct: 143 RTKSTGRSEGTIGVN 157
>gi|517287|emb|CAA56477.1| ribosomal protein S13 [Sulfolobus acidocaldarius]
Length = 184
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG K+ +AL IKG G + I+++K ++D +KR GE S+E++ KI ++ N +
Sbjct: 16 DVDGTMKLPYALAMIKGIGYNTAMIIIRKLNLDKDKRLGEISDEDIKKIENLLNNKIIPE 75
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
P+W NRQKD G + + L ++ + +L L + R+ RG+RH GL+VRGQ
Sbjct: 76 SPNWIYNRQKDYESG--ADMHLVTSDLIFLQLEMILRGRGRSRSWRGVRHSLGLKVRGQR 133
Query: 124 TKTTGRRGRTVGVSKKK 140
T+TTGR G T+GV + K
Sbjct: 134 TRTTGRTGATIGVRRAK 150
>gi|388503436|gb|AFK39784.1| unknown [Lotus japonicus]
Length = 47
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 34/35 (97%)
Query: 106 RAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 140
R HRG+RHYWGLRVRGQHTKTTGRRG+TVGVSKK+
Sbjct: 13 RNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 47
>gi|221219956|gb|ACM08639.1| 40S ribosomal protein S18 [Salmo salar]
Length = 75
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 72 QKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRG 131
+KD D YSQ+L D+KLRE LER KK +AH G R +WG VRG+HTK G G
Sbjct: 2 EKDEKDANYSQVLANVQ---DNKLREILERQKKNKAHCGFRRFWG--VRGKHTKIIGCSG 56
Query: 132 RTVGVSKKK 140
RTVG+SKKK
Sbjct: 57 RTVGMSKKK 65
>gi|240276444|gb|EER39956.1| 40S ribosomal protein S18 [Ajellomyces capsulatus H143]
Length = 77
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 38/42 (90%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAG 42
++TN+DGK+K+M+ALT IKG GRR+SN+V KKAD+DLNKR G
Sbjct: 18 LNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRIG 59
>gi|351700064|gb|EHB02983.1| 40S ribosomal protein S18 [Heterocephalus glaber]
Length = 83
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 8/91 (8%)
Query: 29 VLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTST 88
+ +KAD DL K+ E +++EV +IT Q KI DW L + K DGKYSQ+L +
Sbjct: 1 MWRKADGDLAKKVRELTKDEVQPMIT----SHQNKILDWCLTKWKYGKDGKYSQVLASG- 55
Query: 89 AQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+D+KL EDLE+L KI+AH+ H+W LR+
Sbjct: 56 --VDNKLHEDLEQL-KIQAHKEQCHFWSLRI 83
>gi|373853727|ref|ZP_09596526.1| 30S ribosomal protein S13 [Opitutaceae bacterium TAV5]
gi|391228144|ref|ZP_10264351.1| 30S ribosomal protein S13 [Opitutaceae bacterium TAV1]
gi|372473254|gb|EHP33265.1| 30S ribosomal protein S13 [Opitutaceae bacterium TAV5]
gi|391223637|gb|EIQ02057.1| 30S ribosomal protein S13 [Opitutaceae bacterium TAV1]
Length = 125
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 28/142 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+KV F+L I G G +++V+K+A+++ + RA + +EE+++KI+ ++T+
Sbjct: 5 LGVDIPAKKKVSFSLRYIYGIGPVRADLVVKEAELNPDMRAQDLTEEQLNKILQVITD-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
K +V+G L +L +L+RL+ I +RG+RH L VR
Sbjct: 63 -----------HKWVVEG-----------DLRRELTGNLKRLQAIGCYRGIRHRRSLPVR 100
Query: 121 GQHTKTTG--RRG--RTVGVSK 138
GQ T T R+G RTVGV+K
Sbjct: 101 GQRTSTNARTRKGPRRTVGVTK 122
>gi|397689195|ref|YP_006526449.1| 30S ribosomal protein S13 [Melioribacter roseus P3M]
gi|395810687|gb|AFN73436.1| Ribosomal protein S13 [Melioribacter roseus P3M]
Length = 127
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 25/126 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++ ++K LT I G GRR + +L KA ID K+ + SEEEV KI +IMT+ YK
Sbjct: 8 DLPKQKKSYIGLTYIYGIGRRTALDILSKAGIDPEKKIADLSEEEVAKIRSIMTS--DYK 65
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+ L S+++++++RL I +RG+RH GL VRGQ
Sbjct: 66 V-----------------------EGALRSEVQQNIKRLMDIGCYRGLRHRRGLPVRGQR 102
Query: 124 TKTTGR 129
T+T R
Sbjct: 103 TRTNAR 108
>gi|392404107|ref|YP_006440719.1| SSU ribosomal protein S13P [Turneriella parva DSM 21527]
gi|390612061|gb|AFM13213.1| SSU ribosomal protein S13P [Turneriella parva DSM 21527]
Length = 127
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 27/139 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++ +++V+ LT I G G + ++ ++ KA I L KR E SE+EV KI
Sbjct: 8 DLPNQKRVVIGLTYIYGIGDKVAHDIVTKAGIPLAKRVHELSEDEVGKI----------- 56
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
K I+D +Y T L SK++ D++RL ++RG RH GL RGQ
Sbjct: 57 ---------KKIIDAEY-----TVEGALRSKVQLDMKRLVDTGSYRGSRHRKGLPARGQR 102
Query: 124 TKTTG--RRGRTVGVSKKK 140
TKT R+GR + V+ KK
Sbjct: 103 TKTNARTRKGRRLTVAGKK 121
>gi|406899961|gb|EKD43088.1| hypothetical protein ACD_72C00465G0001 [uncultured bacterium]
Length = 128
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 29/143 (20%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
STNI ++K+ ++L I G GR + +VLK+A ID N R + +E + DK+
Sbjct: 5 STNIPNEKKIEYSLPYIFGIGRTLAKVVLKEAGIDGNIRTKDLTEAQQDKL--------- 55
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ I++ Y + L ++ +++RLK I+A+RG+RH L +RG
Sbjct: 56 -----------RAIIEKVYK-----TEGDLRREIMSNIKRLKDIKAYRGIRHMKHLPLRG 99
Query: 122 QHTKTTGR--RGRT--VGVSKKK 140
Q TKT R RG T VS KK
Sbjct: 100 QRTKTNSRTVRGNTRKTAVSGKK 122
>gi|294055199|ref|YP_003548857.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221]
gi|293614532|gb|ADE54687.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221]
Length = 120
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 24/129 (18%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I +K+ ++L + G G + ++ +A D ++RAG+ SEEE++++ TI+ + +
Sbjct: 5 LGVDIPANKKLEYSLRYVYGIGPTRAKTIVAEAGFDPDRRAGDLSEEELNQLATIVAD-K 63
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QY +V+G L ++ +L+RL +R+ RGMRH GL VR
Sbjct: 64 QY------------VVEG-----------DLRREITANLKRLIAVRSWRGMRHARGLPVR 100
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 101 GQRTKTNAR 109
>gi|406994582|gb|EKE13563.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 136
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 30/135 (22%)
Query: 10 KVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFL 69
K +ALT I+G G S VLK ID+ KR + S EE+ KI T +
Sbjct: 14 KANYALTKIRGLGWTLSEKVLKDCGIDIKKRVSDLSSEEISKINTEL------------- 60
Query: 70 NRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
+K ++G ++++ RE+++RL+ I ++RGMRH GL RGQ T+T R
Sbjct: 61 --EKYQIEGDIARVV-----------RENIQRLQIIGSYRGMRHVRGLPARGQRTRTNAR 107
Query: 130 --RG--RTVGVSKKK 140
RG +TVG KK+
Sbjct: 108 TKRGKRKTVGAFKKE 122
>gi|269123122|ref|YP_003305699.1| 30S ribosomal protein S13 [Streptobacillus moniliformis DSM 12112]
gi|268314448|gb|ACZ00822.1| ribosomal protein S13 [Streptobacillus moniliformis DSM 12112]
Length = 121
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 26/127 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V +LT I G GR SN +L KA I+ + + + +EEEV KI TI+ +Y
Sbjct: 7 VDIPRNKRVEVSLTYIYGIGRSISNEILVKAGINRDTKVKDLTEEEVGKIRTIV---EEY 63
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L ++R +++RL I+ +RG+RH GL VRGQ
Sbjct: 64 KI-----------------------EGELRKEIRLNIKRLTDIKCYRGLRHRMGLPVRGQ 100
Query: 123 HTKTTGR 129
TKT R
Sbjct: 101 KTKTNAR 107
>gi|373449880|ref|ZP_09541973.1| 30S ribosomal subunit protein S13 [Wolbachia pipientis wAlbB]
gi|371932925|emb|CCE76960.1| 30S ribosomal subunit protein S13 [Wolbachia pipientis wAlbB]
Length = 122
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 27/132 (20%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
N+ K+ + FALT I G G +NI+ + ID KR E +E+++KI + +
Sbjct: 8 NVPVKKCIPFALTYIHGIGITTANIICRSCKIDERKRVSELQDEDIEKISSFI------- 60
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ- 122
RQK +++G +L K+ D++ L +I +RG+RH GL VRGQ
Sbjct: 61 -------RQKYVIEG-----------ELRKKVAMDIKSLMEIGCYRGLRHRKGLPVRGQR 102
Query: 123 -HTKTTGRRGRT 133
HT R+GR+
Sbjct: 103 THTNAKTRKGRS 114
>gi|269122556|ref|YP_003310733.1| 30S ribosomal protein S13 [Sebaldella termitidis ATCC 33386]
gi|268616434|gb|ACZ10802.1| ribosomal protein S13 [Sebaldella termitidis ATCC 33386]
Length = 121
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 26/127 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V +LT I G GR +N +L+KA++D N + + SEE+V +I TI+ ++
Sbjct: 7 VDIPRNKRVEISLTYIFGIGRSTANKILEKANVDKNIKVKDLSEEQVGQIRTIVD---EF 63
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L ++R +++RL I+++RG+RH GL VRGQ
Sbjct: 64 KI-----------------------EGELRKEIRLNIKRLMDIKSYRGLRHRNGLPVRGQ 100
Query: 123 HTKTTGR 129
TKT R
Sbjct: 101 KTKTNAR 107
>gi|353328484|ref|ZP_08970811.1| 30S ribosomal protein S13 [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
Length = 122
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 27/132 (20%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
N+ K+ + FALT I G G +NI+ + ID KR E +E+++KI + +
Sbjct: 8 NVPVKKCIPFALTYIHGIGITTANIICRSCKIDERKRVSELQDEDIEKISSFI------- 60
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ- 122
RQK +++G +L K+ D++ L +I +RG+RH GL VRGQ
Sbjct: 61 -------RQKYVIEG-----------ELRKKVAMDIKSLIEIGCYRGLRHRKGLPVRGQR 102
Query: 123 -HTKTTGRRGRT 133
HT R+GR+
Sbjct: 103 THTNAKTRKGRS 114
>gi|406910945|gb|EKD50848.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 127
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 25/126 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
NI G +K+ +AL I G GR ++ ++KKA+ID N RA + S++++ KI ++ N YK
Sbjct: 8 NIPGNKKIPYALQYIYGIGRTYAWDIVKKAEIDPNTRADDVSDDDMAKIRQMLEN--DYK 65
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+ +L +++ ++ RL +RG RH GL VRGQ
Sbjct: 66 V-----------------------EGELRREVQLNVRRLMDFNTYRGTRHRKGLPVRGQR 102
Query: 124 TKTTGR 129
+KT R
Sbjct: 103 SKTNAR 108
>gi|190571567|ref|YP_001975925.1| 30S ribosomal protein S13 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018969|ref|ZP_03334776.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|226712803|sp|B3CN47.1|RS13_WOLPP RecName: Full=30S ribosomal protein S13
gi|190357839|emb|CAQ55295.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995078|gb|EEB55719.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 122
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 27/132 (20%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
N+ K+ V FALT I G G +NI+ + ID KR E +E+++KI + +
Sbjct: 8 NVPVKKCVPFALTYIHGIGITTANIICRSCKIDERKRVLELQDEDIEKISSFI------- 60
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ- 122
RQK +++G +L K+ D++ L +I +RG+RH GL VRGQ
Sbjct: 61 -------RQKYVIEG-----------ELRKKVAMDIKSLMEIGCYRGLRHRKGLPVRGQR 102
Query: 123 -HTKTTGRRGRT 133
HT R+GR+
Sbjct: 103 THTNAKTRKGRS 114
>gi|262038712|ref|ZP_06012072.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264]
gi|261747264|gb|EEY34743.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264]
Length = 121
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 26/127 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V +LT I G GR SN +L+KA +D + + + +EE+V KI TI+ +Y
Sbjct: 7 VDIPRNKRVEISLTYIFGIGRSTSNEILEKAGVDKDIKVKDLTEEQVGKIRTIV---EEY 63
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L ++R +++RL I+++RG+RH GL VRGQ
Sbjct: 64 KI-----------------------EGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQ 100
Query: 123 HTKTTGR 129
TKT R
Sbjct: 101 KTKTNAR 107
>gi|222099992|ref|YP_002534560.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359]
gi|254811172|sp|B9K8B1.1|RS13_THENN RecName: Full=30S ribosomal protein S13
gi|221572382|gb|ACM23194.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359]
Length = 125
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ + +KV ALT I G GR S +LK +D +KR GE ++EE+ KI
Sbjct: 5 VGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGVDPDKRVGELTDEEISKIT------- 57
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
KY Q +L S++ ++ RL +I +RG+RH GL VR
Sbjct: 58 ------------------KYIQDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVR 99
Query: 121 GQHTKTTGR 129
GQ T++ R
Sbjct: 100 GQKTRSNAR 108
>gi|406950297|gb|EKD80579.1| hypothetical protein ACD_40C00053G0006 [uncultured bacterium]
Length = 131
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 30/136 (22%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+++ ALT + G G + S I+L KA IDLN RA S EV K+ I+ ++K+
Sbjct: 13 KRIEVALTYVYGIGPKISRIILDKAKIDLNTRAKNLSALEVAKLQKIL---EEFKVEGDL 69
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+KDI RE+++RLK+I +RG RH GL GQ T+T
Sbjct: 70 ---RKDI--------------------RENIQRLKRIGCYRGYRHSVGLPAHGQRTRTNA 106
Query: 129 R--RG--RTVGVSKKK 140
R RG +T+G KK+
Sbjct: 107 RTLRGKRKTIGAMKKE 122
>gi|406900224|gb|EKD43264.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 128
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 29/143 (20%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
STNI +K+ FAL + G G+ + +LK A ID N RA + +E + DK+
Sbjct: 5 STNIPNDKKIAFALPYVFGIGKTLAVKILKDAGIDENIRAKDLTEAQQDKL--------- 55
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+ IV+ Y + L ++ +++RLK ++ +RG+RH L VRG
Sbjct: 56 -----------RAIVEKDYK-----TEGDLRREIMSNIKRLKDVKCYRGIRHMKHLPVRG 99
Query: 122 QHTKTTGR--RG--RTVGVSKKK 140
Q TKT R RG R VS KK
Sbjct: 100 QRTKTNSRTVRGNVRKTAVSGKK 122
>gi|167957549|ref|ZP_02544623.1| 30S ribosomal protein S13 [candidate division TM7 single-cell
isolate TM7c]
Length = 128
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 27/134 (20%)
Query: 5 IDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKI 64
I +++V +LT I G G +++ +L A I+ R + +E E KI
Sbjct: 9 IPSEKQVQISLTYIYGIGPKYARDILAAAKIEPTTRVKDLTEAEEQKI------------ 56
Query: 65 PDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHT 124
+DI+D Y T+ L + +++RLK + ++RG+RH GL VRGQ T
Sbjct: 57 --------RDIIDNNY-----TTEGDLQRLVTNNIKRLKDVNSYRGLRHKSGLPVRGQRT 103
Query: 125 KTTG--RRGRTVGV 136
+T R+GR + V
Sbjct: 104 RTNARTRKGRAIAV 117
>gi|406994568|gb|EKE13549.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 136
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 30/135 (22%)
Query: 10 KVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFL 69
KV +ALT I G G S VLK ID+ KR + S +++ KI T + +Y+I
Sbjct: 14 KVDYALTNIMGLGWTLSKKVLKNCGIDVKKRVSDLSSDDISKISTEL---EKYQI----- 65
Query: 70 NRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
+ D+V +RE+++RL+ I ++RGMRH GL VRGQ T+T R
Sbjct: 66 --EGDLV----------------RVVRENIQRLQVIGSYRGMRHTKGLPVRGQRTRTNAR 107
Query: 130 --RG--RTVGVSKKK 140
RG +T+G KK+
Sbjct: 108 TKRGKRKTIGAFKKE 122
>gi|291518022|emb|CBK73243.1| 30S ribosomal protein S13 [Butyrivibrio fibrisolvens 16/4]
Length = 122
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+++ LT I G GR SN VL+ A +D N R + ++EEV KI T++
Sbjct: 13 KRIEIGLTYIYGIGRVSSNKVLEAAGVDPNTRVKDLTDEEVKKISTVIDE---------- 62
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
LT L ++ D++RL++I +RG+RH GL VRGQ TKT
Sbjct: 63 ---------------TLTVEGNLRREVALDIKRLQEIGCYRGIRHRKGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|407013021|gb|EKE27220.1| 30S ribosomal protein S13 [uncultured bacterium (gcode 4)]
Length = 121
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 28/132 (21%)
Query: 11 VMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLN 70
V ALT + G GR S VL K I+ NKR SEEE+DKI + + ++I +W L
Sbjct: 15 VEIALTYVYGVGRSLSQKVLDKVGIERNKRIESLSEEELDKIRDEL---KSFQI-EWDLR 70
Query: 71 RQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG-- 128
R+ + ++++RL++I +RG RH L VRGQ TKT
Sbjct: 71 RE----------------------VAQNIKRLQEINCYRGTRHKKKLPVRGQRTKTNART 108
Query: 129 RRGRTVGVSKKK 140
R+G+ V ++ KK
Sbjct: 109 RKGKAVSIANKK 120
>gi|189219453|ref|YP_001940094.1| 30S ribosomal protein S13 [Methylacidiphilum infernorum V4]
gi|226712760|sp|B3DVZ3.1|RS13_METI4 RecName: Full=30S ribosomal protein S13
gi|189186311|gb|ACD83496.1| Ribosomal protein S13 [Methylacidiphilum infernorum V4]
Length = 131
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 78/144 (54%), Gaps = 28/144 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ I G + ++ AL I G GR + ++ ++A+++ RA + + +++++II ++
Sbjct: 5 LGVEIPGNKPLISALPVIYGIGRSRAKLICEQAELNPQMRAKDLTNQQINRIIQVIEE-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ F +V+G L +++++++RL+ IR +RG+RH GL VR
Sbjct: 63 -----NGF------VVEG-----------DLRREIQQNIKRLQSIRCYRGIRHIRGLPVR 100
Query: 121 GQHTKTTG--RRG--RTVGVSKKK 140
GQ T T R+G +T+GV ++K
Sbjct: 101 GQRTSTNARTRKGPRKTIGVVRRK 124
>gi|384914828|ref|ZP_10015558.1| 30S ribosomal protein S13 [Methylacidiphilum fumariolicum SolV]
gi|384527266|emb|CCG91426.1| 30S ribosomal protein S13 [Methylacidiphilum fumariolicum SolV]
Length = 131
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 78/144 (54%), Gaps = 28/144 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ I G + ++ AL I G GR + ++ ++A+++ RA + + +++++II ++
Sbjct: 5 LGVEIPGNKPLIAALPVIYGIGRSRAKLICEQAELNPQMRAKDLTNQQINRIIQVIEE-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ F +++G L +++++++RL+ IR +RG+RH GL VR
Sbjct: 63 -----NGF------VIEG-----------DLRREVQQNIKRLQSIRCYRGLRHIRGLPVR 100
Query: 121 GQHTKTTG--RRG--RTVGVSKKK 140
GQ T T R+G +T+GV ++K
Sbjct: 101 GQRTSTNARTRKGPRKTIGVVRRK 124
>gi|338176276|ref|YP_004653086.1| 30S ribosomal protein S13 [Parachlamydia acanthamoebae UV-7]
gi|336480634|emb|CCB87232.1| 30S ribosomal protein S13 [Parachlamydia acanthamoebae UV-7]
Length = 122
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 27/142 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I +++ +LT I G GRR +N ++ K +D N RA + +E+E+ I ++ +
Sbjct: 5 IGIDIPDNKRLEISLTYIYGLGRRLANEIIAKLGLDPNMRAHKLTEDEIASINALLQS-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
QY +V+G L +++ +++RL I ++RG RH GL VR
Sbjct: 63 QY------------VVEG-----------DLKRQVQNNIKRLISIHSYRGQRHRVGLPVR 99
Query: 121 GQHTKTTG--RRGRTVGVSKKK 140
GQ T+T R+GR V+ KK
Sbjct: 100 GQRTRTNARTRKGRRKTVANKK 121
>gi|182412029|ref|YP_001817095.1| 30S ribosomal protein S13 [Opitutus terrae PB90-1]
gi|226712770|sp|B1ZNC6.1|RS13_OPITP RecName: Full=30S ribosomal protein S13
gi|177839243|gb|ACB73495.1| ribosomal protein S13 [Opitutus terrae PB90-1]
Length = 129
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 28/141 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ I K+KV ++L I G G +++++K+A + + RA + +EE+++KI+ ++T +
Sbjct: 5 LGVEIPAKKKVAYSLRYINGIGPTRADLLVKEAGLSPDMRAQDLTEEQLNKILHLITEHK 64
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
W L L ++ +L+RL+ I +RG+RH GL VR
Sbjct: 65 ------WVLE------------------GDLRREIAGNLKRLQAINCYRGVRHRRGLPVR 100
Query: 121 GQHTKTTG--RRG--RTVGVS 137
GQ T T R+G +TVGVS
Sbjct: 101 GQRTSTNARTRKGPRKTVGVS 121
>gi|15644224|ref|NP_229275.1| 30S ribosomal protein S13 [Thermotoga maritima MSB8]
gi|148270447|ref|YP_001244907.1| 30S ribosomal protein S13 [Thermotoga petrophila RKU-1]
gi|170289158|ref|YP_001739396.1| 30S ribosomal protein S13 [Thermotoga sp. RQ2]
gi|281412754|ref|YP_003346833.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10]
gi|403253590|ref|ZP_10919891.1| 30S ribosomal protein S13 [Thermotoga sp. EMP]
gi|418045533|ref|ZP_12683628.1| 30S ribosomal protein S13 [Thermotoga maritima MSB8]
gi|6831659|sp|Q9X1I5.1|RS13_THEMA RecName: Full=30S ribosomal protein S13
gi|166231929|sp|A5IMA8.1|RS13_THEP1 RecName: Full=30S ribosomal protein S13
gi|226712798|sp|B1LBL5.1|RS13_THESQ RecName: Full=30S ribosomal protein S13
gi|4982041|gb|AAD36543.1|AE001798_8 ribosomal protein S13 [Thermotoga maritima MSB8]
gi|147735991|gb|ABQ47331.1| SSU ribosomal protein S13P [Thermotoga petrophila RKU-1]
gi|170176661|gb|ACB09713.1| ribosomal protein S13 [Thermotoga sp. RQ2]
gi|281373857|gb|ADA67419.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10]
gi|351676418|gb|EHA59571.1| 30S ribosomal protein S13 [Thermotoga maritima MSB8]
gi|402811124|gb|EJX25612.1| 30S ribosomal protein S13 [Thermotoga sp. EMP]
Length = 125
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ + +KV ALT I G GR S +LK ID KR G+ ++EE+ KI
Sbjct: 5 VGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKIT------- 57
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
KY Q +L S++ ++ RL +I +RG+RH GL VR
Sbjct: 58 ------------------KYIQDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVR 99
Query: 121 GQHTKTTGR 129
GQ T++ R
Sbjct: 100 GQKTRSNAR 108
>gi|150392134|ref|YP_001322183.1| 30S ribosomal protein S13 [Alkaliphilus metalliredigens QYMF]
gi|166991596|sp|A6TWF6.1|RS13_ALKMQ RecName: Full=30S ribosomal protein S13
gi|149951996|gb|ABR50524.1| ribosomal protein S13 [Alkaliphilus metalliredigens QYMF]
Length = 123
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 37/141 (26%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR+ SN +L I+++ R + +EEEV+++
Sbjct: 12 EKRVEVGLTYIFGIGRQTSNKILAATGINVDTRIKDLTEEEVNEL--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGLRVRGQH 123
+ ++D Y Q++ LR + ++RLK+IR +RG+RH GL VRGQ
Sbjct: 57 -----RKLIDADY---------QVEGDLRREVSLNIKRLKEIRCYRGIRHTKGLPVRGQK 102
Query: 124 TKTTG--RRG--RTVGVSKKK 140
TKT R+G RTVG KKK
Sbjct: 103 TKTNARTRKGPKRTVGRKKKK 123
>gi|78043008|ref|YP_361093.1| 30S ribosomal protein S13 [Carboxydothermus hydrogenoformans
Z-2901]
gi|91207693|sp|Q3A9U1.1|RS13_CARHZ RecName: Full=30S ribosomal protein S13
gi|77995123|gb|ABB14022.1| ribosomal protein S13 [Carboxydothermus hydrogenoformans Z-2901]
Length = 123
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G GR +N++LKK I+ + R + +EEEV K+
Sbjct: 13 KRVEIALTYIYGIGRPTANVILKKTGINPDTRVKDLTEEEVAKL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+D ++ Y +L ++ +++RL +I +RG+RH GL VRGQ T+T
Sbjct: 57 ----RDEIEKNYK-----VEGELRREVALNIKRLIEIGCYRGIRHRKGLPVRGQRTRTNA 107
Query: 129 --RRG--RTVGVSKKK 140
R+G RTVGV +KK
Sbjct: 108 RTRKGPRRTVGVKRKK 123
>gi|225165490|ref|ZP_03727316.1| ribosomal protein S13 [Diplosphaera colitermitum TAV2]
gi|224800267|gb|EEG18671.1| ribosomal protein S13 [Diplosphaera colitermitum TAV2]
Length = 125
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 28/142 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+KV ++L I G G ++ V+K+A+++ + RA + +EE+++KI+ ++T
Sbjct: 5 LGVDIPAKKKVSYSLRYIYGIGPVRADQVVKEAELNPDMRAQDLTEEQLNKILQVITE-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
K V+G + + TA DL+RL+ I +RG+RH L VR
Sbjct: 63 -----------HKWTVEGDLRR---SHTA--------DLKRLQAIGCYRGIRHRRSLPVR 100
Query: 121 GQHTKTTG--RRG--RTVGVSK 138
GQ T T R+G RTVGV+K
Sbjct: 101 GQRTSTNARTRKGPRRTVGVTK 122
>gi|237742281|ref|ZP_04572762.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13]
gi|256845560|ref|ZP_05551018.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2]
gi|294785151|ref|ZP_06750439.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27]
gi|421145977|ref|ZP_15605785.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|229429929|gb|EEO40141.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13]
gi|256719119|gb|EEU32674.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2]
gi|294486865|gb|EFG34227.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27]
gi|395487618|gb|EJG08565.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 118
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 28/128 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G G+ S +LK+A ++ + R + +EEEV+KI I+
Sbjct: 7 VDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREII------ 60
Query: 63 KIPDWFLNRQKDI-VDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
KDI V+G L ++R ++RL I+ +RG+RH L VRG
Sbjct: 61 ----------KDIKVEG-----------DLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRG 99
Query: 122 QHTKTTGR 129
QH+KT R
Sbjct: 100 QHSKTNAR 107
>gi|237744172|ref|ZP_04574653.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1]
gi|260494242|ref|ZP_05814373.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33]
gi|289765672|ref|ZP_06525050.1| SSU ribosomal protein S13P [Fusobacterium sp. D11]
gi|336401261|ref|ZP_08582032.1| 30S ribosomal protein S13 [Fusobacterium sp. 21_1A]
gi|336418672|ref|ZP_08598944.1| 30S ribosomal protein S13 [Fusobacterium sp. 11_3_2]
gi|422940133|ref|ZP_16967484.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|423137030|ref|ZP_17124673.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229431401|gb|EEO41613.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1]
gi|260198388|gb|EEW95904.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33]
gi|289717227|gb|EFD81239.1| SSU ribosomal protein S13P [Fusobacterium sp. D11]
gi|336161171|gb|EGN64178.1| 30S ribosomal protein S13 [Fusobacterium sp. 21_1A]
gi|336164349|gb|EGN67256.1| 30S ribosomal protein S13 [Fusobacterium sp. 11_3_2]
gi|339889859|gb|EGQ79079.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|371961097|gb|EHO78740.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 118
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 28/128 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G G+ S +LK+A ++ + R + +EEEV+KI I+
Sbjct: 7 VDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREIV------ 60
Query: 63 KIPDWFLNRQKDI-VDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
KDI V+G L ++R ++RL I+ +RG+RH L VRG
Sbjct: 61 ----------KDIKVEG-----------DLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRG 99
Query: 122 QHTKTTGR 129
QH+KT R
Sbjct: 100 QHSKTNAR 107
>gi|315918291|ref|ZP_07914531.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC
25563]
gi|317059779|ref|ZP_07924264.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R]
gi|313685455|gb|EFS22290.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R]
gi|313692166|gb|EFS29001.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC
25563]
Length = 118
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 26/127 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G GR S VLK+A ++ + R + +EEEV+KI
Sbjct: 7 VDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTEEEVNKI---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++I++G + L ++R ++RL I+ +RG+RH L VRGQ
Sbjct: 57 ----------REIING------IKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQ 100
Query: 123 HTKTTGR 129
+KT R
Sbjct: 101 SSKTNAR 107
>gi|310779571|ref|YP_003967904.1| 30S ribosomal protein S13 [Ilyobacter polytropus DSM 2926]
gi|309748894|gb|ADO83556.1| SSU ribosomal protein S13P [Ilyobacter polytropus DSM 2926]
Length = 118
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 34/131 (25%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I +++ ALT I G G+ S VLK+A +D N R + +EEE
Sbjct: 7 VDIPRNKRIEIALTYIYGIGKSTSQKVLKEAGVDFNTRVKDLTEEE-------------- 52
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGLR 118
LN+ + I+D T +++ LR+D ++RL IR +RG+RH L
Sbjct: 53 ------LNKVRAIID----------TVKVEGDLRKDVRLSVKRLMDIRCYRGLRHKMNLP 96
Query: 119 VRGQHTKTTGR 129
VRGQ +KT R
Sbjct: 97 VRGQKSKTNAR 107
>gi|452994843|emb|CCQ93507.1| ribosomal protein S13 [Clostridium ultunense Esp]
Length = 120
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 26/121 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR SN +L++A++D N R + +E EV+ I
Sbjct: 13 KRVEIGLTYIYGIGRSRSNEILRQANVDPNTRVKDLTETEVNTI---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
++I+D + + L + +L+RL++I +RG+RH GL VRGQ TKT
Sbjct: 57 ----RNIIDNYHVE------GDLRRDIALNLKRLREINCYRGIRHRRGLPVRGQRTKTNA 106
Query: 129 R 129
R
Sbjct: 107 R 107
>gi|260438191|ref|ZP_05792007.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876]
gi|292809381|gb|EFF68586.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876]
Length = 122
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +L +A +D N R + ++EEV +I
Sbjct: 12 EKRVEIGLTYIYGIGRVSSNRILAEAKVDPNTRVKDLTDEEVGRI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
KD++D SQ T L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 57 -----KDVIDA--SQ---TVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|47459094|ref|YP_015956.1| 30S ribosomal protein S13 [Mycoplasma mobile 163K]
gi|81614321|sp|Q6KI31.1|RS13_MYCMO RecName: Full=30S ribosomal protein S13
gi|47458423|gb|AAT27745.1| 30S ribosomal protein s13 [Mycoplasma mobile 163K]
Length = 122
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 26/129 (20%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++ I ++V+ +LT + G GR S +L +A+ID N R + SEE++ KI I +
Sbjct: 5 LNVEIPNNKRVIISLTYVYGIGRSLSKQILAEANIDENIRVKDLSEEDLTKIRNIASR-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
T+ L +++ +++RL +I+++RG+RH GL VR
Sbjct: 63 ------------------------FTTEGDLRREIQLNIKRLMEIKSYRGIRHRKGLPVR 98
Query: 121 GQHTKTTGR 129
GQ T+ R
Sbjct: 99 GQVTQKNAR 107
>gi|395225714|ref|ZP_10404230.1| 30S ribosomal protein S13 [Thiovulum sp. ES]
gi|394446114|gb|EJF06959.1| 30S ribosomal protein S13 [Thiovulum sp. ES]
Length = 123
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 36/140 (25%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
K++V ++LT I G G S IVLK+A +D NKR E +++E+ I
Sbjct: 12 KKRVEYSLTYIYGIGIHTSRIVLKEAGVDGNKRVYELNDDEIASI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLRE----DLERLKKIRAHRGMRHYWGLRVRGQH 123
SQ L + ++ LR+ D++ L + ++RG+RH GL VRGQ
Sbjct: 57 -------------SQTLRGANYLIEGDLRKKVDLDIKALMDLGSYRGLRHRKGLPVRGQK 103
Query: 124 TKTTGR----RGRTVGVSKK 139
TKT R R +TVG + K
Sbjct: 104 TKTNARTRKGRKKTVGAAAK 123
>gi|284040597|ref|YP_003390527.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74]
gi|283819890|gb|ADB41728.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74]
Length = 125
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I K++ ALT I G GR + +L A I ++K+A E S+EE + ++N +Y
Sbjct: 7 VDIPDKKRGEIALTYIFGIGRSRAKKILTDAGISVDKKASEWSDEEASAVRNAISN--EY 64
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+ QL S+++ ++RL I +RG+RH GL VRGQ
Sbjct: 65 KVE-----------------------GQLRSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQ 101
Query: 123 HTKTTG--RRGRTVGVSKKK 140
HTK R+G+ V+ KK
Sbjct: 102 HTKNNSRTRKGKRKTVANKK 121
>gi|337288335|ref|YP_004627807.1| 30S ribosomal protein S13 [Thermodesulfobacterium sp. OPB45]
gi|334902073|gb|AEH22879.1| 30S ribosomal protein S13 [Thermodesulfobacterium geofontis OPF15]
Length = 123
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 25/128 (19%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+I + ALT I G GR + VL KA +D K+ + +EEE+++I I+ R+
Sbjct: 6 GVDIPENKPAEIALTYIYGIGRTLAQKVLTKAGVDWFKKIKDLTEEEINRIRQIIE--RE 63
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YK+ L ++R++++RL I +RG+RH GL VRG
Sbjct: 64 YKV-----------------------EGDLRKEVRQNIQRLISIGCYRGLRHKMGLPVRG 100
Query: 122 QHTKTTGR 129
Q T++ R
Sbjct: 101 QRTRSNAR 108
>gi|62184756|ref|YP_219541.1| 30S ribosomal protein S13 [Chlamydophila abortus S26/3]
gi|329942430|ref|ZP_08291240.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10]
gi|332287071|ref|YP_004421972.1| 30S ribosomal protein S13 [Chlamydophila psittaci 6BC]
gi|384450210|ref|YP_005662810.1| 30S ribosomal protein S13 [Chlamydophila psittaci 6BC]
gi|384451218|ref|YP_005663816.1| 30S ribosomal protein S13 [Chlamydophila psittaci 01DC11]
gi|384452194|ref|YP_005664791.1| 30S ribosomal protein S13 [Chlamydophila psittaci 08DC60]
gi|384453168|ref|YP_005665764.1| 30S ribosomal protein S13 [Chlamydophila psittaci C19/98]
gi|384454146|ref|YP_005666741.1| 30S ribosomal protein S13 [Chlamydophila psittaci 02DC15]
gi|392376324|ref|YP_004064102.1| putative 30s ribosomal protein s13 [Chlamydophila psittaci RD1]
gi|406591929|ref|YP_006739109.1| ribosomal S13/S18 family protein [Chlamydia psittaci CP3]
gi|406593040|ref|YP_006740219.1| ribosomal S13/S18 family protein [Chlamydia psittaci NJ1]
gi|406594147|ref|YP_006741263.1| ribosomal S13/S18 family protein [Chlamydia psittaci MN]
gi|407454933|ref|YP_006733824.1| ribosomal S13/S18 family protein [Chlamydia psittaci GR9]
gi|407456297|ref|YP_006734870.1| ribosomal S13/S18 family protein [Chlamydia psittaci VS225]
gi|407457666|ref|YP_006735971.1| ribosomal S13/S18 family protein [Chlamydia psittaci WS/RT/E30]
gi|407458912|ref|YP_006737015.1| ribosomal S13/S18 family protein [Chlamydia psittaci M56]
gi|407460284|ref|YP_006738059.1| ribosomal S13/S18 family protein [Chlamydia psittaci WC]
gi|410858099|ref|YP_006974039.1| putative 30s ribosomal protein s13 [Chlamydia psittaci 01DC12]
gi|424824805|ref|ZP_18249792.1| 30S ribosomal protein S13 [Chlamydophila abortus LLG]
gi|449070756|ref|YP_007437836.1| 30S ribosomal protein S13 [Chlamydophila psittaci Mat116]
gi|81313064|sp|Q5L701.1|RS13_CHLAB RecName: Full=30S ribosomal protein S13
gi|62147823|emb|CAH63569.1| putative 30s ribosomal protein s13 [Chlamydophila abortus S26/3]
gi|313847667|emb|CBY16655.1| putative 30s ribosomal protein s13 [Chlamydophila psittaci RD1]
gi|325506969|gb|ADZ18607.1| 30S ribosomal protein S13 [Chlamydophila psittaci 6BC]
gi|328815340|gb|EGF85328.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10]
gi|328914304|gb|AEB55137.1| ribosomal protein S13p/S18e [Chlamydophila psittaci 6BC]
gi|333409904|gb|EGK68891.1| 30S ribosomal protein S13 [Chlamydophila abortus LLG]
gi|334691949|gb|AEG85168.1| 30S ribosomal protein S13 [Chlamydophila psittaci C19/98]
gi|334692928|gb|AEG86146.1| 30S ribosomal protein S13 [Chlamydophila psittaci 01DC11]
gi|334693903|gb|AEG87120.1| 30S ribosomal protein S13 [Chlamydophila psittaci 02DC15]
gi|334694883|gb|AEG88099.1| 30S ribosomal protein S13 [Chlamydophila psittaci 08DC60]
gi|405781476|gb|AFS20225.1| ribosomal S13/S18 family protein [Chlamydia psittaci GR9]
gi|405782579|gb|AFS21327.1| ribosomal S13/S18 family protein [Chlamydia psittaci MN]
gi|405783558|gb|AFS22305.1| ribosomal S13/S18 family protein [Chlamydia psittaci VS225]
gi|405784723|gb|AFS23469.1| ribosomal S13/S18 family protein [Chlamydia psittaci WS/RT/E30]
gi|405785719|gb|AFS24464.1| ribosomal S13/S18 family protein [Chlamydia psittaci M56]
gi|405787423|gb|AFS26167.1| ribosomal S13/S18 family protein [Chlamydia psittaci WC]
gi|405787801|gb|AFS26544.1| ribosomal S13/S18 family protein [Chlamydia psittaci CP3]
gi|405788912|gb|AFS27654.1| ribosomal S13/S18 family protein [Chlamydia psittaci NJ1]
gi|410810994|emb|CCO01637.1| putative 30s ribosomal protein s13 [Chlamydia psittaci 01DC12]
gi|449039264|gb|AGE74688.1| 30S ribosomal protein S13 [Chlamydophila psittaci Mat116]
Length = 122
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+K+ +LT I G G S ++ K ++ RA E +EEE+ ++ +++ +
Sbjct: 5 IGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAAELTEEEIGRLNSLLQS-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
D+ +V+G L +++ D++RL I A+RG RH L VR
Sbjct: 63 -----DY-------VVEG-----------DLRRRVQSDIKRLISIHAYRGQRHRLSLPVR 99
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 100 GQRTKTNSR 108
>gi|150020870|ref|YP_001306224.1| 30S ribosomal protein S13 [Thermosipho melanesiensis BI429]
gi|166231928|sp|A6LLN8.1|RS13_THEM4 RecName: Full=30S ribosomal protein S13
gi|149793391|gb|ABR30839.1| ribosomal protein S13 [Thermosipho melanesiensis BI429]
Length = 122
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ I +KV ALT I G G+ + + + +ID NKR E +EE+ KI T + +
Sbjct: 5 VGVEIPNDKKVEIALTYIYGIGKTRAKQICEATNIDPNKRVRELGDEEISKIATFIQ--Q 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YK+ +L +++ ++++RL I +RG+RH GL VR
Sbjct: 63 NYKV-----------------------EGELRTEVMQNIKRLIDIGCYRGLRHKLGLPVR 99
Query: 121 GQHTKTTGR 129
GQ TK+ R
Sbjct: 100 GQKTKSNAR 108
>gi|262066973|ref|ZP_06026585.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693]
gi|294782960|ref|ZP_06748286.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA]
gi|340752149|ref|ZP_08688957.1| 30S ribosomal protein S13 [Fusobacterium sp. 2_1_31]
gi|358466706|ref|ZP_09176500.1| hypothetical protein HMPREF9093_00974 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|422317116|ref|ZP_16398482.1| 30S ribosomal protein S13 [Fusobacterium periodonticum D10]
gi|229421965|gb|EEO37012.1| 30S ribosomal protein S13 [Fusobacterium sp. 2_1_31]
gi|291379321|gb|EFE86839.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693]
gi|294481601|gb|EFG29376.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA]
gi|357068779|gb|EHI78763.1| hypothetical protein HMPREF9093_00974 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|404590221|gb|EKA92679.1| 30S ribosomal protein S13 [Fusobacterium periodonticum D10]
Length = 118
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 28/128 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G GR S +LK+A I+ + R + +EEEV+KI I+
Sbjct: 7 VDIPRNKRVEIALTYIYGIGRPTSQKILKEAGINFDTRVKDLTEEEVNKIREII------ 60
Query: 63 KIPDWFLNRQKDI-VDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
KDI V+G L ++R ++RL I+ +RG+RH L VRG
Sbjct: 61 ----------KDIKVEG-----------DLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRG 99
Query: 122 QHTKTTGR 129
Q +KT R
Sbjct: 100 QSSKTNAR 107
>gi|386812722|ref|ZP_10099947.1| 30S ribosomal protein S13 [planctomycete KSU-1]
gi|386404992|dbj|GAB62828.1| 30S ribosomal protein S13 [planctomycete KSU-1]
Length = 127
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
T+I ++++ +LT I G G+ S +LK +ID N RA + E+++ I
Sbjct: 7 TDIPADKRIVISLTYIYGIGKALSEKILKDINIDENIRAKDLHEDQLSMI---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
Y + + QL + +++ R+K I +RG+RH GL VRGQ
Sbjct: 57 ---------------SGYIEKSFATEGQLRRQEMQNIARMKSISCYRGIRHKIGLPVRGQ 101
Query: 123 HTKTTG--RRGRTVGVSKKK 140
TKT R+GR V+ KK
Sbjct: 102 RTKTNARTRKGRKKTVAGKK 121
>gi|302390982|ref|YP_003826802.1| 30S ribosomal protein S13 [Acetohalobium arabaticum DSM 5501]
gi|302203059|gb|ADL11737.1| SSU ribosomal protein S13P [Acetohalobium arabaticum DSM 5501]
Length = 123
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR + ++++A +D + R + +EEEV K+
Sbjct: 13 KRVEIGLTYIYGIGRSTAQDIIEEAGLDPDTRVRDLTEEEVAKL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+ ++D +Y T +L ++R D++RLK I +RG+RH GL VRGQ T+T
Sbjct: 57 ----RRVIDEEY-----TVEGELRREIRSDIKRLKDIGCYRGIRHKRGLPVRGQRTRTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|15618538|ref|NP_224824.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae CWL029]
gi|15836160|ref|NP_300684.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae J138]
gi|16752412|ref|NP_444671.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae AR39]
gi|33241985|ref|NP_876926.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae TW-183]
gi|384449110|ref|YP_005661712.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae LPCoLN]
gi|6831656|sp|Q9Z7S6.1|RS13_CHLPN RecName: Full=30S ribosomal protein S13
gi|4376926|gb|AAD18767.1| S13 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
gi|7189053|gb|AAF38002.1| ribosomal protein S13 [Chlamydophila pneumoniae AR39]
gi|8979000|dbj|BAA98835.1| S13 ribosomal protein [Chlamydophila pneumoniae J138]
gi|33236495|gb|AAP98583.1| ribosomal protein S13 [Chlamydophila pneumoniae TW-183]
gi|269302412|gb|ACZ32512.1| ribosomal protein S13 [Chlamydophila pneumoniae LPCoLN]
Length = 122
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+K+ +LT I G G S+ ++KK +D RA E +EEEV ++ +++
Sbjct: 5 IGIDIPAKKKLKISLTYIYGIGSARSDEIIKKLKLDPEARASELTEEEVGRLNSLL---- 60
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Q T L +++ D++RL I ++RG RH L VR
Sbjct: 61 ---------------------QSEYTVEGDLRRRVQSDIKRLIAIHSYRGQRHRLSLPVR 99
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 100 GQRTKTNSR 108
>gi|374289893|ref|YP_005036978.1| 30S ribosomal protein S13 [Bacteriovorax marinus SJ]
gi|301168434|emb|CBW28024.1| 30S ribosomal protein S13 [Bacteriovorax marinus SJ]
Length = 127
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I + V AL +I G G + + VL KA IDLNK + + +EEE + I
Sbjct: 5 LGVDIPRNKVVTVALRSIYGVGPKVAEEVLTKAGIDLNKNSNDLTEEEANNI-------- 56
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ +++G+Y T L ++ +++RLK + +RG+RH GL VR
Sbjct: 57 ------------RLLLEGEY-----TVEGDLRRQIGLNIKRLKDLGCYRGIRHRKGLPVR 99
Query: 121 GQHTKTTGR 129
GQ T T R
Sbjct: 100 GQRTSTNAR 108
>gi|435852999|ref|YP_007314318.1| 30S ribosomal protein S13 [Halobacteroides halobius DSM 5150]
gi|433669410|gb|AGB40225.1| 30S ribosomal protein S13 [Halobacteroides halobius DSM 5150]
Length = 118
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+++ LT I G GR + +L++ ID N R E +E++V K+
Sbjct: 13 KQIKIGLTYIYGIGRSSAQDILEQTKIDPNTRVHELTEDQVAKL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
++++D +Y +L + R D++RLK I ++RG+RH GL VRGQ T+T
Sbjct: 57 ----RNVIDEEY-----VVEGELRRQKRSDIKRLKDIGSYRGVRHRKGLPVRGQRTRTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|222529705|ref|YP_002573587.1| 30S ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725]
gi|302871523|ref|YP_003840159.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47]
gi|312127251|ref|YP_003992125.1| 30S ribosomal protein S13 [Caldicellulosiruptor hydrothermalis 108]
gi|312135471|ref|YP_004002809.1| 30S ribosomal protein S13 [Caldicellulosiruptor owensensis OL]
gi|312622070|ref|YP_004023683.1| 30S ribosomal protein S13 [Caldicellulosiruptor kronotskyensis
2002]
gi|254811124|sp|B9MKF6.1|RS13_ANATD RecName: Full=30S ribosomal protein S13
gi|222456552|gb|ACM60814.1| ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725]
gi|302574382|gb|ADL42173.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47]
gi|311775522|gb|ADQ05009.1| 30S ribosomal protein S13 [Caldicellulosiruptor owensensis OL]
gi|311777270|gb|ADQ06756.1| 30S ribosomal protein S13 [Caldicellulosiruptor hydrothermalis 108]
gi|312202537|gb|ADQ45864.1| 30S ribosomal protein S13 [Caldicellulosiruptor kronotskyensis
2002]
Length = 124
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 29/137 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V ALT I G G S +L+ +D NKR + +++EV KI
Sbjct: 12 EKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+D +D + +L +++ +++RL IR +RG+RH GL VRGQ T+T
Sbjct: 57 -----RDYIDKNFK-----VEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTN 106
Query: 128 G--RRG--RTVGVSKKK 140
R+G +TVGV +KK
Sbjct: 107 ARTRKGPRKTVGVMRKK 123
>gi|114778800|ref|ZP_01453607.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1]
gi|114550931|gb|EAU53495.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1]
Length = 122
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
NI +++V ALT I G G S +L A ID+N R + S+ EVDKI
Sbjct: 8 NIPTQKRVEIALTYIYGIGHTSSKAILASAGIDVNTRVKDLSDGEVDKI----------- 56
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+ ++D Y+ L ++ ++RL + +RG+RH GL VRGQ
Sbjct: 57 ---------RSLIDADYA-----VEGDLRREVTMSIKRLTDLGCYRGLRHRKGLPVRGQR 102
Query: 124 TKTTGR 129
+KT R
Sbjct: 103 SKTNAR 108
>gi|404492315|ref|YP_006716421.1| 30S ribosomal protein S13 [Pelobacter carbinolicus DSM 2380]
gi|91207711|sp|Q3A6M3.1|RS13_PELCD RecName: Full=30S ribosomal protein S13
gi|77544422|gb|ABA87984.1| ribosomal protein S13 [Pelobacter carbinolicus DSM 2380]
Length = 122
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 33/125 (26%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+++ ALT I G GR S +L+KA +D N R E +E E +I
Sbjct: 13 KRIEVALTYIYGIGRSSSQDILQKAGVDPNTRTDELTEAEAGQI---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLRE----DLERLKKIRAHRGMRHYWGLRVRGQHT 124
+DI+DG+ Q++ LR +++RL + +RG+RH GL VRGQ T
Sbjct: 57 ----RDIIDGQM---------QVEGDLRRVVTGNIKRLMDLGCYRGLRHRRGLPVRGQKT 103
Query: 125 KTTGR 129
KT R
Sbjct: 104 KTNAR 108
>gi|330444132|ref|YP_004377118.1| 30S ribosomal protein S13p/S18e [Chlamydophila pecorum E58]
gi|328807242|gb|AEB41415.1| ribosomal protein S13p/S18e [Chlamydophila pecorum E58]
Length = 122
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+K+ +LT I G G S ++++ ++D R E +EEEV ++ ++ +
Sbjct: 5 IGIDIPAKKKLKISLTYIYGIGPALSKEIIERLNLDPEARTSELTEEEVGRLNALLQS-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+Y +V+G L +++ D++RL I A+RG RH L VR
Sbjct: 63 EY------------VVEG-----------DLRRRVQSDIKRLIAIHAYRGQRHRLSLPVR 99
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 100 GQRTKTNSR 108
>gi|389843582|ref|YP_006345662.1| 30S ribosomal protein S13 [Mesotoga prima MesG1.Ag.4.2]
gi|387858328|gb|AFK06419.1| 30S ribosomal protein S13 [Mesotoga prima MesG1.Ag.4.2]
Length = 122
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ + +K ALT I G G SN +L +ID NKRA + ++EEV KI +
Sbjct: 5 LGVELPNNKKTFVALTYIYGIGYTRSNEILSGTEIDGNKRAKDLTDEEVSKIAKYINE-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YK+ +L +++ ++RL +I ++RG RH GL VR
Sbjct: 63 HYKVE-----------------------GELRTEVDRSIKRLIEIGSYRGYRHRNGLPVR 99
Query: 121 GQHTKTTGR 129
GQ T + GR
Sbjct: 100 GQKTHSNGR 108
>gi|15835410|ref|NP_297169.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg]
gi|270285590|ref|ZP_06194984.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg]
gi|270289600|ref|ZP_06195902.1| 30S ribosomal protein S13 [Chlamydia muridarum Weiss]
gi|301336986|ref|ZP_07225188.1| 30S ribosomal protein S13 [Chlamydia muridarum MopnTet14]
gi|14195202|sp|Q9PJN2.1|RS13_CHLMU RecName: Full=30S ribosomal protein S13
gi|7190824|gb|AAF39599.1| ribosomal protein S13 [Chlamydia muridarum Nigg]
Length = 122
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+K+ +LT I G G S ++ + ++ RA E +EEEV ++ ++ +
Sbjct: 5 IGIDIPAKKKLKISLTYIYGIGPALSEEIIARLQLNPEARAAELTEEEVGRLNALLQS-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
D+ +V+G L +++ D++RL I A+RG RH L VR
Sbjct: 63 -----DY-------VVEG-----------DLRRRVQSDIKRLITIHAYRGQRHRLSLPVR 99
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 100 GQRTKTNSR 108
>gi|254302863|ref|ZP_04970221.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|421526832|ref|ZP_15973438.1| 30S ribosomal protein S13 [Fusobacterium nucleatum ChDC F128]
gi|422338319|ref|ZP_16419279.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|148323055|gb|EDK88305.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|355372957|gb|EHG20296.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|402256940|gb|EJU07416.1| 30S ribosomal protein S13 [Fusobacterium nucleatum ChDC F128]
Length = 118
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 28/128 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G G+ S +LK+A I+ + R + +EEEV+KI I+
Sbjct: 7 VDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEVNKIREII------ 60
Query: 63 KIPDWFLNRQKDI-VDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
KDI V+G L ++R ++RL I+ +RG+RH L VRG
Sbjct: 61 ----------KDIKVEG-----------DLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRG 99
Query: 122 QHTKTTGR 129
Q +KT R
Sbjct: 100 QSSKTNAR 107
>gi|15605238|ref|NP_220024.1| 30S ribosomal protein S13 [Chlamydia trachomatis D/UW-3/CX]
gi|76789246|ref|YP_328332.1| 30S ribosomal protein S13 [Chlamydia trachomatis A/HAR-13]
gi|237802938|ref|YP_002888132.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/Jali20/OT]
gi|237804860|ref|YP_002889014.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311327|ref|ZP_05353897.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276]
gi|255317628|ref|ZP_05358874.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276s]
gi|376282519|ref|YP_005156345.1| 30S ribosomal protein S13 [Chlamydia trachomatis A2497]
gi|385240037|ref|YP_005807879.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9768]
gi|385240962|ref|YP_005808803.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11222]
gi|385242815|ref|YP_005810654.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9301]
gi|385243716|ref|YP_005811562.1| 30S ribosomal protein S13 [Chlamydia trachomatis D-EC]
gi|385244596|ref|YP_005812440.1| 30S ribosomal protein S13 [Chlamydia trachomatis D-LC]
gi|385246424|ref|YP_005815246.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11074]
gi|385270211|ref|YP_005813371.1| 30S ribosomal protein S13 [Chlamydia trachomatis A2497]
gi|91207695|sp|Q3KLI8.1|RS13_CHLTA RecName: Full=30S ribosomal protein S13
gi|290463296|sp|P0CE04.1|RS13_CHLTR RecName: Full=30S ribosomal protein S13
gi|3328946|gb|AAC68110.1| S13 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167776|gb|AAX50784.1| SSU ribosomal protein S13P [Chlamydia trachomatis A/HAR-13]
gi|231273160|emb|CAX10073.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274172|emb|CAX10966.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/Jali20/OT]
gi|296436042|gb|ADH18216.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9768]
gi|296436970|gb|ADH19140.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11222]
gi|296437903|gb|ADH20064.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11074]
gi|297140403|gb|ADH97161.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9301]
gi|297748639|gb|ADI51185.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-EC]
gi|297749519|gb|ADI52197.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-LC]
gi|347975351|gb|AEP35372.1| SSU ribosomal protein S13P [Chlamydia trachomatis A2497]
gi|371908549|emb|CAX09179.1| SSU ribosomal protein S13P [Chlamydia trachomatis A2497]
gi|438690444|emb|CCP49701.1| 30S ribosomal protein S13 [Chlamydia trachomatis A/7249]
gi|438691529|emb|CCP48803.1| 30S ribosomal protein S13 [Chlamydia trachomatis A/5291]
gi|438692902|emb|CCP47904.1| 30S ribosomal protein S13 [Chlamydia trachomatis A/363]
gi|440525433|emb|CCP50684.1| 30S ribosomal protein S13 [Chlamydia trachomatis K/SotonK1]
gi|440528110|emb|CCP53594.1| 30S ribosomal protein S13 [Chlamydia trachomatis D/SotonD5]
gi|440529000|emb|CCP54484.1| 30S ribosomal protein S13 [Chlamydia trachomatis D/SotonD6]
gi|440532574|emb|CCP58084.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/SotonG1]
gi|440533468|emb|CCP58978.1| 30S ribosomal protein S13 [Chlamydia trachomatis Ia/SotonIa1]
gi|440534362|emb|CCP59872.1| 30S ribosomal protein S13 [Chlamydia trachomatis Ia/SotonIa3]
Length = 122
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+K+ +LT I G G S ++ + ++ RA E +EEEV ++ ++ +
Sbjct: 5 IGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALLQS-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
D+ +V+G L +++ D++RL I A+RG RH L VR
Sbjct: 63 -----DY-------VVEG-----------DLRRRVQSDIKRLITIHAYRGQRHRLSLPVR 99
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 100 GQRTKTNSR 108
>gi|166154724|ref|YP_001654842.1| 30S ribosomal protein S13 [Chlamydia trachomatis 434/Bu]
gi|166155599|ref|YP_001653854.1| 30S ribosomal protein S13 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335998|ref|ZP_07224242.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2tet1]
gi|339626193|ref|YP_004717672.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2c]
gi|226712714|sp|B0B883.1|RS13_CHLT2 RecName: Full=30S ribosomal protein S13
gi|226712716|sp|B0BCE8.1|RS13_CHLTB RecName: Full=30S ribosomal protein S13
gi|620027|gb|AAA74987.1| ribosomal protein S13 [Chlamydia trachomatis]
gi|165930712|emb|CAP04209.1| SSU ribosomal protein S13P [Chlamydia trachomatis 434/Bu]
gi|165931587|emb|CAP07163.1| SSU ribosomal protein S13P [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339460827|gb|AEJ77330.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2c]
gi|440526320|emb|CCP51804.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/8200/07]
gi|440536145|emb|CCP61658.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/795]
gi|440537038|emb|CCP62552.1| 30S ribosomal protein S13 [Chlamydia trachomatis L1/440/LN]
gi|440537927|emb|CCP63441.1| 30S ribosomal protein S13 [Chlamydia trachomatis L1/1322/p2]
gi|440538817|emb|CCP64331.1| 30S ribosomal protein S13 [Chlamydia trachomatis L1/115]
gi|440539706|emb|CCP65220.1| 30S ribosomal protein S13 [Chlamydia trachomatis L1/224]
gi|440540598|emb|CCP66112.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2/25667R]
gi|440541486|emb|CCP67000.1| 30S ribosomal protein S13 [Chlamydia trachomatis L3/404/LN]
gi|440542373|emb|CCP67887.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/UCH-2]
gi|440543264|emb|CCP68778.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/Canada2]
gi|440544155|emb|CCP69669.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/LST]
gi|440545045|emb|CCP70559.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/Ams1]
gi|440545935|emb|CCP71449.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/CV204]
gi|440914197|emb|CCP90614.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/Ams2]
gi|440915087|emb|CCP91504.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/Ams3]
gi|440915978|emb|CCP92395.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/Canada1]
gi|440916873|emb|CCP93290.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/Ams4]
gi|440917763|emb|CCP94180.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/Ams5]
Length = 122
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+K+ +LT I G G S ++ + ++ RA E +EEEV ++ ++ +
Sbjct: 5 IGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALLQS-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
D+ +V+G L +++ D++RL I A+RG RH L VR
Sbjct: 63 -----DY-------VVEG-----------DLRRRVQSDIKRLITIHAYRGQRHRLSLPVR 99
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 100 GQRTKTNSR 108
>gi|255348886|ref|ZP_05380893.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70]
gi|255503426|ref|ZP_05381816.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70s]
gi|255507104|ref|ZP_05382743.1| 30S ribosomal protein S13 [Chlamydia trachomatis D(s)2923]
gi|385241891|ref|YP_005809731.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/11023]
gi|385245498|ref|YP_005814321.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/150]
gi|386262866|ref|YP_005816145.1| 30S ribosomal protein S13 [Chlamydia trachomatis Sweden2]
gi|389858205|ref|YP_006360447.1| 30S ribosomal protein S13 [Chlamydia trachomatis F/SW4]
gi|389859081|ref|YP_006361322.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/SW3]
gi|389859957|ref|YP_006362197.1| 30S ribosomal protein S13 [Chlamydia trachomatis F/SW5]
gi|289525554|emb|CBJ15032.1| SSU ribosomal protein S13P [Chlamydia trachomatis Sweden2]
gi|296435114|gb|ADH17292.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/150]
gi|296438834|gb|ADH20987.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/11023]
gi|380249277|emb|CCE14570.1| SSU ribosomal protein S13P [Chlamydia trachomatis F/SW5]
gi|380250152|emb|CCE13681.1| SSU ribosomal protein S13P [Chlamydia trachomatis F/SW4]
gi|380251030|emb|CCE12792.1| SSU ribosomal protein S13P [Chlamydia trachomatis E/SW3]
gi|440527217|emb|CCP52701.1| 30S ribosomal protein S13 [Chlamydia trachomatis D/SotonD1]
gi|440529891|emb|CCP55375.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/SotonE4]
gi|440530790|emb|CCP56274.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/SotonE8]
gi|440531681|emb|CCP57191.1| 30S ribosomal protein S13 [Chlamydia trachomatis F/SotonF3]
gi|440535258|emb|CCP60768.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/Bour]
Length = 122
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 27/142 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+K+ +LT I G G S ++ + ++ RA E +EEEV ++ ++ +
Sbjct: 5 IGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALLQS-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
D+ +V+G L +++ D++RL I A+RG RH L VR
Sbjct: 63 -----DY-------VVEG-----------DLRRRVQSDIKRLITIHAYRGQRHRLSLPVR 99
Query: 121 GQHTKTTG--RRGRTVGVSKKK 140
GQ TKT R+G+ V+ KK
Sbjct: 100 GQRTKTNSRTRKGKCKTVAGKK 121
>gi|146297260|ref|YP_001181031.1| 30S ribosomal protein S13 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166231904|sp|A4XLQ5.1|RS13_CALS8 RecName: Full=30S ribosomal protein S13
gi|145410836|gb|ABP67840.1| ribosomal protein S13 [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 124
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 29/137 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
++++ ALT I G G S +L+ +D NKR + +++EV KI
Sbjct: 12 EKRIEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+D +D + +L +++ +++RL IR +RG+RH GL VRGQ T+T
Sbjct: 57 -----RDYIDKNFK-----VEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTN 106
Query: 128 G--RRG--RTVGVSKKK 140
R+G +TVGV +KK
Sbjct: 107 ARTRKGPRKTVGVMRKK 123
>gi|217077307|ref|YP_002335025.1| 30S ribosomal protein S13 [Thermosipho africanus TCF52B]
gi|419759883|ref|ZP_14286168.1| 30S ribosomal protein S13 [Thermosipho africanus H17ap60334]
gi|226712795|sp|B7IHX0.1|RS13_THEAB RecName: Full=30S ribosomal protein S13
gi|217037162|gb|ACJ75684.1| ribosomal protein S13p/S18e [Thermosipho africanus TCF52B]
gi|407514922|gb|EKF49708.1| 30S ribosomal protein S13 [Thermosipho africanus H17ap60334]
Length = 122
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ I +KV ALT I G GR + + + +ID +KR E ++EE+ KI T
Sbjct: 5 VGVEIPNDKKVEIALTYIYGIGRTRAKQICEATNIDPDKRVRELNDEEISKIAT------ 58
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Y Q +L +++ ++++RL I +RG RH GL VR
Sbjct: 59 -------------------YIQQNFKVEGELRTEVMQNIKRLIDIGCYRGFRHKLGLPVR 99
Query: 121 GQHTKTTGR 129
GQ TK+ R
Sbjct: 100 GQKTKSNAR 108
>gi|315925230|ref|ZP_07921444.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621464|gb|EFV01431.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 122
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 29/135 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR S +L + ID N R + +E+EV+ +
Sbjct: 13 KRVEVGLTYIYGIGRSTSKEILAELKIDPNTRCKDLTEDEVNSL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
++I+D KY T L ++ +++RL +I ++RG RH GL VRGQ TKT
Sbjct: 57 ----RNILDEKY-----TVEGDLRREVNLNIKRLIEIGSYRGYRHRRGLPVRGQKTKTNA 107
Query: 129 --RRG--RTVGVSKK 139
R+G RTVG SKK
Sbjct: 108 RTRKGPKRTVGRSKK 122
>gi|374298050|ref|YP_005048241.1| 30S ribosomal protein S13 [Clostridium clariflavum DSM 19732]
gi|359827544|gb|AEV70317.1| SSU ribosomal protein S13P [Clostridium clariflavum DSM 19732]
Length = 123
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 29/137 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +L K I+ + R + +++E++K+
Sbjct: 12 EKRVEIGLTYIYGIGRSLSNQILSKTGINPDTRVKDLTDDEINKL--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
++I+D +Y L ++ +++RL +I +RG RH GL VRGQ TKT
Sbjct: 57 -----REIIDKEYK-----VEGDLRREVSLNIKRLMEIGCYRGRRHRMGLPVRGQRTKTN 106
Query: 128 G--RRG--RTVGVSKKK 140
R+G +TVGV +KK
Sbjct: 107 ARTRKGPKKTVGVQRKK 123
>gi|337286840|ref|YP_004626313.1| 30S ribosomal protein S13 [Thermodesulfatator indicus DSM 15286]
gi|335359668|gb|AEH45349.1| 30S ribosomal protein S13 [Thermodesulfatator indicus DSM 15286]
Length = 124
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 25/127 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I + + ALT I G GR + VL KA +D NK+ + +EEE+ KI I+ R+Y
Sbjct: 7 VDIPDNKSIEIALTYIYGIGRTLAQKVLTKAGVDWNKKTKDLTEEELTKIRHIVE--REY 64
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+ L ++ +++RL + +RG+RH GL VRGQ
Sbjct: 65 KV-----------------------EGDLRREVSANIKRLMDMGCYRGLRHRMGLPVRGQ 101
Query: 123 HTKTTGR 129
T++ R
Sbjct: 102 STRSNAR 108
>gi|296131861|ref|YP_003639108.1| 30S ribosomal protein S13 [Thermincola potens JR]
gi|296030439|gb|ADG81207.1| 30S ribosomal protein S13 [Thermincola potens JR]
Length = 123
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G GR +N +L + ++ + R + +EEEV K+
Sbjct: 13 KRVEIALTYIFGIGRPTANQILSQTGVNPDTRVRDLTEEEVAKL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
++++D Y L ++ +++RL +I +RG+RH GL VRGQ TKT
Sbjct: 57 ----REVIDKNYK-----VEGDLRREISLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNA 107
Query: 129 R----RGRTVGVSKKK 140
R +TVGV +KK
Sbjct: 108 RTRKGPAKTVGVRRKK 123
>gi|344923980|ref|ZP_08777441.1| 30S ribosomal protein S13 [Candidatus Odyssella thessalonicensis
L13]
Length = 125
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
NI +++V+ ALT I G G+ + ++ K +D +KR E S++EV +I
Sbjct: 7 VNIPSQKRVIIALTYIYGIGKVKAKEIVAKLGVDESKRVNELSDQEVLRI---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++I+D Y L ++ +++RL + +RG+RH GL VRGQ
Sbjct: 57 ----------REIIDSDY-----LVEGDLRREISMNIKRLMDLGCYRGLRHRKGLPVRGQ 101
Query: 123 --HTKTTGRRGRTVGVSKKK 140
HT R+G+ V ++ KK
Sbjct: 102 RTHTNARTRKGKAVPIAGKK 121
>gi|282891931|ref|ZP_06300410.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498191|gb|EFB40531.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 104
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 27/128 (21%)
Query: 15 LTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQKD 74
+T I G GRR +N ++ K +D N RA + +E+E+ I ++ + QY
Sbjct: 1 MTYIYGLGRRLANEIIAKLGLDPNMRAHKLTEDEIASINALLQS--QY------------ 46
Query: 75 IVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG--RRGR 132
+V+G L +++ +++RL I ++RG RH GL VRGQ T+T R+GR
Sbjct: 47 VVEG-----------DLKRQVQNNIKRLISIHSYRGQRHRVGLPVRGQRTRTNARTRKGR 95
Query: 133 TVGVSKKK 140
V+ KK
Sbjct: 96 RKTVANKK 103
>gi|29839880|ref|NP_828986.1| 30S ribosomal protein S13 [Chlamydophila caviae GPIC]
gi|89898701|ref|YP_515811.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56]
gi|32363224|sp|P59752.1|RS13_CHLCV RecName: Full=30S ribosomal protein S13
gi|123482768|sp|Q252X2.1|RS13_CHLFF RecName: Full=30S ribosomal protein S13
gi|29834227|gb|AAP04864.1| ribosomal protein S13 [Chlamydophila caviae GPIC]
gi|89332073|dbj|BAE81666.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56]
Length = 122
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I K+K+ +LT I G G S ++ K ++ RA E +EEE+ ++ +++ +
Sbjct: 5 IGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAVELTEEEIGRLNSLLQS-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+Y +V+G L +++ D++RL I A+RG RH L VR
Sbjct: 63 EY------------VVEG-----------DLRRRVQSDIKRLISIHAYRGQRHRLSLPVR 99
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 100 GQRTKTNSR 108
>gi|164686551|ref|ZP_02210579.1| hypothetical protein CLOBAR_00118 [Clostridium bartlettii DSM
16795]
gi|164604420|gb|EDQ97885.1| 30S ribosomal protein S13 [Clostridium bartlettii DSM 16795]
Length = 123
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 27/140 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ +++ LT I G GR +N +L KA+I+ + R + SEEEV+ + I+ N
Sbjct: 7 VDLPNEKRAEIGLTYIYGIGRATANEILAKAEINPDTRIKDLSEEEVNTLRRIIDN---- 62
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
D+ +V+G L ++ +++RL+ I+ +RG+RH GL +RGQ
Sbjct: 63 ---DF-------LVEG-----------DLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQ 101
Query: 123 HTKTTG--RRGRTVGVSKKK 140
TKT R+G VS+KK
Sbjct: 102 KTKTNARTRKGPRKTVSRKK 121
>gi|46446065|ref|YP_007430.1| 30S ribosomal protein S13 [Candidatus Protochlamydia amoebophila
UWE25]
gi|81627551|sp|Q6ME44.1|RS13_PARUW RecName: Full=30S ribosomal protein S13
gi|46399706|emb|CAF23155.1| probable 30S ribosomal protein S13 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 122
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 27/142 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I +++ +LT + G GR SN ++ K +D N RA + +++++ ++ ++T+
Sbjct: 5 IGIDIPDNKRLEISLTYLYGIGRHLSNEIIVKLGLDPNMRAHKLTQDDLARLNGLLTS-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+Y +V+G L +++ +++RL I ++RGMRH GL VR
Sbjct: 63 EY------------MVEG-----------DLRRQVQNNIKRLISIHSYRGMRHRLGLPVR 99
Query: 121 GQHTKTTG--RRGRTVGVSKKK 140
GQ TKT R+GR V+ KK
Sbjct: 100 GQRTKTNSRTRKGRRKTVANKK 121
>gi|125975410|ref|YP_001039320.1| 30S ribosomal protein S13 [Clostridium thermocellum ATCC 27405]
gi|256005303|ref|ZP_05430269.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360]
gi|281419372|ref|ZP_06250387.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20]
gi|385777846|ref|YP_005687011.1| 30S ribosomal protein S13 [Clostridium thermocellum DSM 1313]
gi|419723251|ref|ZP_14250384.1| 30S ribosomal protein S13 [Clostridium thermocellum AD2]
gi|419727104|ref|ZP_14254110.1| 30S ribosomal protein S13 [Clostridium thermocellum YS]
gi|158706224|sp|A3DJJ8.1|RS13_CLOTH RecName: Full=30S ribosomal protein S13
gi|125715635|gb|ABN54127.1| 30S ribosomal protein S13 [Clostridium thermocellum ATCC 27405]
gi|255990739|gb|EEU00855.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360]
gi|281406992|gb|EFB37255.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20]
gi|316939526|gb|ADU73560.1| 30S ribosomal protein S13 [Clostridium thermocellum DSM 1313]
gi|380769509|gb|EIC03423.1| 30S ribosomal protein S13 [Clostridium thermocellum YS]
gi|380780716|gb|EIC10381.1| 30S ribosomal protein S13 [Clostridium thermocellum AD2]
Length = 123
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 29/137 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +L+K I+ + R + ++EE+ K+
Sbjct: 12 EKRVEIGLTYIFGIGRTLSNEILRKTGINPDTRVKDLTDEEISKL--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
++++D +Y L ++ +++RL +I +RG RH GL VRGQ TKT
Sbjct: 57 -----REVIDKEYK-----VEGDLRREIALNIKRLMEIGCYRGRRHRAGLPVRGQRTKTN 106
Query: 128 G--RRG--RTVGVSKKK 140
R+G +TVGV +KK
Sbjct: 107 ARTRKGPKKTVGVQRKK 123
>gi|312793914|ref|YP_004026837.1| 30S ribosomal protein S13 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|344996400|ref|YP_004798743.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A]
gi|312181054|gb|ADQ41224.1| 30S ribosomal protein S13 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|343964619|gb|AEM73766.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A]
Length = 124
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 29/137 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V ALT I G G S +L+ +D NKR + +++EV +I
Sbjct: 12 EKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVARI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+D +D + +L +++ +++RL IR +RG+RH GL VRGQ T+T
Sbjct: 57 -----RDYIDKNFK-----VEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTN 106
Query: 128 G--RRG--RTVGVSKKK 140
R+G +TVGV +KK
Sbjct: 107 ARTRKGPRKTVGVMRKK 123
>gi|310829559|ref|YP_003961916.1| 30S ribosomal protein S13 [Eubacterium limosum KIST612]
gi|308741293|gb|ADO38953.1| hypothetical protein ELI_4009 [Eubacterium limosum KIST612]
Length = 122
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR SN +LK+ +I+ + R + +E EV+ +
Sbjct: 13 KRVEVGLTYIYGIGRPTSNKILKELNINPDTRVKDLTENEVNAL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
++I+D KY T L ++ +++RL +I ++RG+RH GL VRGQ TKT
Sbjct: 57 ----RNILDEKY-----TVEGDLRREVNLNIKRLIEIGSYRGLRHRRGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|167973083|ref|ZP_02555360.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|167974840|ref|ZP_02557117.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|167975997|ref|ZP_02558274.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|167988496|ref|ZP_02570167.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|168362009|ref|ZP_02695188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|195867601|ref|ZP_03079603.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198273653|ref|ZP_03206188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209554322|ref|YP_002284654.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550772|ref|ZP_03771721.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551259|ref|ZP_03772205.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|226712802|sp|B5ZB64.1|RS13_UREU1 RecName: Full=30S ribosomal protein S13
gi|171903351|gb|EDT49640.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|184209077|gb|EDU06120.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188018818|gb|EDU56858.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188997752|gb|EDU66849.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195659696|gb|EDX53076.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660658|gb|EDX53913.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198249681|gb|EDY74462.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209541823|gb|ACI60052.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225379074|gb|EEH01439.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379926|gb|EEH02288.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 132
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 18/129 (13%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I ++V+ +LT I G G+ S +LK A+ID N R + ++E++ +I + N
Sbjct: 5 LGVDIPNDKRVVISLTYIFGIGKSTSQKILKLANIDENIRVNDLADEQIAEIRRVALN-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
F+ +G+ Q+ L + D++RL +I ++RG+RH GL VR
Sbjct: 63 -------FVK-----ANGEKLQL----EGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVR 106
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 107 GQRTKTNAR 115
>gi|374339833|ref|YP_005096569.1| 30S ribosomal protein S13 [Marinitoga piezophila KA3]
gi|372101367|gb|AEX85271.1| 30S ribosomal protein S13 [Marinitoga piezophila KA3]
Length = 122
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ + +K+ ALT I G GR + +L+ ID +KRA E +++E+ KI
Sbjct: 5 LGVEVPNNKKLFIALTYIYGIGRHRAMEILESTGIDPDKRAKELTDDEISKI-------- 56
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
F+N + +V+G +L ++++++ RL +I ++RG RH GL VR
Sbjct: 57 -----THFIN-EHYLVEG-----------ELRQEIQKNISRLIEIGSYRGYRHKNGLPVR 99
Query: 121 GQHTKTTGR 129
GQ T + R
Sbjct: 100 GQKTHSNAR 108
>gi|83591250|ref|YP_431259.1| 30S ribosomal protein S13 [Moorella thermoacetica ATCC 39073]
gi|123523769|sp|Q2RFS3.1|RS13_MOOTA RecName: Full=30S ribosomal protein S13
gi|83574164|gb|ABC20716.1| SSU ribosomal protein S13P [Moorella thermoacetica ATCC 39073]
Length = 123
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G GR SN++L ++ + R + +E+EV
Sbjct: 13 KRVEVALTYIYGIGRPKSNMILAATGVNPDTRVRDLTEDEV------------------- 53
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
NR +D +D + L ++ +++RL +I +RG+RH GL VRGQ TKT
Sbjct: 54 -NRLRDYIDKN-----VVVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNA 107
Query: 129 --RRG--RTVGVSKKK 140
R+G RTVGV +KK
Sbjct: 108 RTRKGPRRTVGVRRKK 123
>gi|406997042|gb|EKE15231.1| ribosomal protein S13 [uncultured bacterium]
Length = 143
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 29/144 (20%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ + ++++ +ALT + G G +LK+ + NK+ E +EEE KI+ ++
Sbjct: 5 LGVTLPDEKRIDYALTILYGIGWTNVRAILKQTGVSANKKVKEVTEEEFKKILEVVET-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YK+ + L + E+++RL++I ++RG+RH GL V
Sbjct: 63 NYKVEGY-----------------------LREAINENIKRLREIGSYRGIRHIRGLPVD 99
Query: 121 GQHTKTTGR--RG--RTVGVSKKK 140
GQ TK+ R RG +TVG KK+
Sbjct: 100 GQRTKSNARTKRGKRKTVGALKKE 123
>gi|19704621|ref|NP_604183.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296329032|ref|ZP_06871538.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|32363351|sp|Q8RE41.1|RS13_FUSNN RecName: Full=30S ribosomal protein S13
gi|19714921|gb|AAL95482.1| SSU ribosomal protein S13P [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296153836|gb|EFG94648.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 118
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 28/128 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G G+ S +LK+A I+ + R + +EEE++KI I+
Sbjct: 7 VDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEINKIREII------ 60
Query: 63 KIPDWFLNRQKDI-VDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
KDI V+G L ++R ++RL I+ +RG+RH L VRG
Sbjct: 61 ----------KDIKVEG-----------DLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRG 99
Query: 122 QHTKTTGR 129
Q +KT R
Sbjct: 100 QSSKTNAR 107
>gi|327399498|ref|YP_004340367.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411]
gi|327182127|gb|AEA34308.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411]
Length = 119
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 26/121 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+K+ ALT I G GR S +LKKA+ID +KR E + EE+ +I +++ + YK+
Sbjct: 13 KKIFIALTYIYGIGRTRSMEILKKANIDPDKRTHELTPEEIQRIRSVIAD---YKV---- 65
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+L ++ +++ L + +RG+RH GL VRGQ T+T
Sbjct: 66 -------------------EGELRKEVAMNIKALMDLGNYRGLRHRRGLPVRGQRTRTNA 106
Query: 129 R 129
R
Sbjct: 107 R 107
>gi|13357815|ref|NP_078089.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167971971|ref|ZP_02554248.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|168282409|ref|ZP_02690076.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|168308562|ref|ZP_02691237.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|170762081|ref|YP_001752338.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|32363424|sp|Q9PQN6.1|RS13_UREPA RecName: Full=30S ribosomal protein S13
gi|189044304|sp|B1AIP4.1|RS13_UREP2 RecName: Full=30S ribosomal protein S13
gi|11276601|pir||H82917 ribosomal protein S13 UU255 [imported] - Ureaplasma urealyticum
gi|6899225|gb|AAF30664.1|AE002122_33 ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827658|gb|ACA32920.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|171902711|gb|EDT49000.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|182675722|gb|EDT87627.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|186700675|gb|EDU18957.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 132
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 18/129 (13%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I ++V+ +LT I G G+ S +LK A+ID N R + ++E++ +I + N
Sbjct: 5 LGVDIPNDKRVVISLTYIFGIGKSTSQQILKLANIDENIRVKDLADEQIAEIRRVALN-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
F+ +G+ Q+ L + D++RL +I ++RG+RH GL VR
Sbjct: 63 -------FVK-----ANGEKLQL----EGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVR 106
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 107 GQRTKTNAR 115
>gi|406907822|gb|EKD48529.1| hypothetical protein ACD_64C00264G0007 [uncultured bacterium]
Length = 127
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 33/131 (25%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
N+ K++V + LT I G G + S +L K I L+KR + ++ EV I
Sbjct: 7 VNLPLKKRVEYGLTYIHGIGVKSSRDILNKLKISLDKRVNDLTDHEVVAI---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGLR 118
Q ++T++ ++ +LR++ ++RL++I ++RG+RH GL
Sbjct: 57 -------------------QKVITASYPVEGELRKEVTLNIKRLQEIGSYRGLRHKKGLP 97
Query: 119 VRGQHTKTTGR 129
VRGQ TKT R
Sbjct: 98 VRGQRTKTNAR 108
>gi|350565617|ref|ZP_08934368.1| 30S ribosomal protein S13 [Peptoniphilus indolicus ATCC 29427]
gi|348663624|gb|EGY80186.1| 30S ribosomal protein S13 [Peptoniphilus indolicus ATCC 29427]
Length = 120
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 36/139 (25%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR+ S +L KAD++ + R + SE EV +I
Sbjct: 12 EKRVEIGLTYIYGIGRKRSQEILTKADVNFDTRVKDLSEAEVARI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLE----RLKKIRAHRGMRHYWGLRVRGQH 123
+++I ++ Q++ LR +++ RL+ I +RGMRH GL VRGQ
Sbjct: 57 ----REEI-----------ASYQVEGDLRREVQMNIKRLRDINCYRGMRHKKGLPVRGQK 101
Query: 124 TKTTG--RRGRTVGVSKKK 140
TKT R+G VSKKK
Sbjct: 102 TKTNARTRKGPKKLVSKKK 120
>gi|158319569|ref|YP_001512076.1| 30S ribosomal protein S13 [Alkaliphilus oremlandii OhILAs]
gi|166991597|sp|A8MLG6.1|RS13_ALKOO RecName: Full=30S ribosomal protein S13
gi|158139768|gb|ABW18080.1| ribosomal protein S13 [Alkaliphilus oremlandii OhILAs]
Length = 123
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR+ SN +L A I+ + R + +EEEV
Sbjct: 13 KRVEVGLTYIFGIGRKTSNNILAAAGINPDTRIKDLTEEEV------------------- 53
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
N + I+D + L ++ +++RLK+IR +RG+RH GL VRGQ TKT
Sbjct: 54 -NNLRRIIDADHH-----VEGDLRREIALNIKRLKEIRCYRGIRHIKGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|196228477|ref|ZP_03127344.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428]
gi|196227880|gb|EDY22383.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428]
Length = 128
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 28/144 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ I G +++ +L I G G + +L++A+I+ + RA + S E++++II +T
Sbjct: 5 LGVEIPGDKRIEASLPYIYGIGPSTAKRILEQANINPDVRAKDLSNEQLNQIIQAIT--- 61
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
K+P ++G L +L+ +L+RL+ I +RG+RH L VR
Sbjct: 62 ASKLP----------IEG-----------DLRRELQSNLKRLQAINCYRGIRHRRSLPVR 100
Query: 121 GQHTKTTG--RRG--RTVGVSKKK 140
GQ T T R+G +TVGV + K
Sbjct: 101 GQRTSTNARTRKGPRKTVGVQRAK 124
>gi|255283708|ref|ZP_05348263.1| 30S ribosomal protein S13 [Bryantella formatexigens DSM 14469]
gi|255265773|gb|EET58978.1| 30S ribosomal protein S13 [Marvinbryantia formatexigens DSM 14469]
Length = 122
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
++++ LT I G GR SN +L+ A ++ + R + ++EEV KI
Sbjct: 12 EKRIEIGLTYIYGIGRTSSNKILEAAGVNPDTRVRDLTDEEVSKI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+D++D Y T L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 57 -----RDVMDEHY-----TVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|225175649|ref|ZP_03729643.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1]
gi|225168978|gb|EEG77778.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1]
Length = 123
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 29/137 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V ALT I G GR+ S +L ++ ++++ R + +E+EV
Sbjct: 12 EKRVEIALTYIYGIGRKTSQDILSQSAVNMDTRVRDLTEDEV------------------ 53
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
NR ++ +D Y L ++ +++RL +I ++RG+RH GL VRGQ TK
Sbjct: 54 --NRLREYIDKNYK-----VEGDLRREVAMNIKRLMEIGSYRGIRHRRGLPVRGQTTKNN 106
Query: 128 G--RRG--RTVGVSKKK 140
R+G RTVGV +KK
Sbjct: 107 ARTRKGPKRTVGVRRKK 123
>gi|406983709|gb|EKE04869.1| ribosomal protein S13 [uncultured bacterium]
Length = 133
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 30/140 (21%)
Query: 5 IDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKI 64
++ K ++ +ALT IKG G SN VL+ D+ +R + S EE++ I
Sbjct: 9 LNDKWRIDYALTRIKGIGWSLSNKVLELLKFDVTRRVKDLSLEEINTI------------ 56
Query: 65 PDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHT 124
GK + + L +++ ++ RL+ I ++RG+RH GL VRGQ T
Sbjct: 57 ------------TGKIEE--FPTEGDLVRRVKANINRLQAIGSYRGIRHTKGLPVRGQRT 102
Query: 125 KTTGR--RG--RTVGVSKKK 140
KT R RG +TVG KK+
Sbjct: 103 KTNARTKRGKRKTVGAFKKE 122
>gi|167036826|ref|YP_001664404.1| 30S ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039545|ref|YP_001662530.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X514]
gi|256752657|ref|ZP_05493509.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1]
gi|289579117|ref|YP_003477744.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9]
gi|297545304|ref|YP_003677606.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|300915204|ref|ZP_07132519.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561]
gi|307725128|ref|YP_003904879.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513]
gi|320115248|ref|YP_004185407.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390636|ref|ZP_08212191.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200]
gi|345018509|ref|YP_004820862.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939551|ref|ZP_10305195.1| 30S ribosomal protein S13 [Thermoanaerobacter siderophilus SR4]
gi|226712796|sp|B0KCM5.1|RS13_THEP3 RecName: Full=30S ribosomal protein S13
gi|226712797|sp|B0K5R8.1|RS13_THEPX RecName: Full=30S ribosomal protein S13
gi|166853785|gb|ABY92194.1| ribosomal protein S13 [Thermoanaerobacter sp. X514]
gi|166855660|gb|ABY94068.1| ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748477|gb|EEU61529.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1]
gi|289528830|gb|ADD03182.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9]
gi|296843079|gb|ADH61595.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|300888928|gb|EFK84075.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561]
gi|307582189|gb|ADN55588.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513]
gi|319928339|gb|ADV79024.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993314|gb|EGD51751.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200]
gi|344033852|gb|AEM79578.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291301|gb|EIV99744.1| 30S ribosomal protein S13 [Thermoanaerobacter siderophilus SR4]
Length = 122
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 27/134 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G GR SN +L KA ++ + R + +EEEV
Sbjct: 13 KRVEIALTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEEEV------------------- 53
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+R ++I+D +Y L ++ +++RL I +RG+RH GL VRGQ T+T
Sbjct: 54 -SRLREIIDKEYK-----VEGDLRKEVAMNIKRLMDIGCYRGIRHKRGLPVRGQRTRTNA 107
Query: 129 --RRGRTVGVSKKK 140
R+G V+KKK
Sbjct: 108 RTRKGPRKTVAKKK 121
>gi|338730508|ref|YP_004659900.1| 30S ribosomal protein S13P [Thermotoga thermarum DSM 5069]
gi|335364859|gb|AEH50804.1| SSU ribosomal protein S13P [Thermotoga thermarum DSM 5069]
Length = 126
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M + +K ALT I G GR + +L+ A +D +KR + ++EEV+KI
Sbjct: 5 MGVELPSNKKCFVALTYIYGIGRSRALEILRNAGVDPDKRVKDLTDEEVNKIT------- 57
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
KY Q +L +++ +++RL I +RG+RH GL VR
Sbjct: 58 ------------------KYIQDHFKVEGELRAEVSRNIKRLIDIGCYRGVRHKLGLPVR 99
Query: 121 GQHTKTTGR 129
GQ T+ R
Sbjct: 100 GQSTRHNAR 108
>gi|340755359|ref|ZP_08692049.1| 30S ribosomal protein S13 [Fusobacterium sp. D12]
gi|373114739|ref|ZP_09528948.1| 30S ribosomal protein S13 [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|419840907|ref|ZP_14364293.1| 30S ribosomal protein S13 [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|421500278|ref|ZP_15947289.1| 30S ribosomal protein S13 [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313687186|gb|EFS24021.1| 30S ribosomal protein S13 [Fusobacterium sp. D12]
gi|371650919|gb|EHO16355.1| 30S ribosomal protein S13 [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|386906995|gb|EIJ71715.1| 30S ribosomal protein S13 [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|402268692|gb|EJU18058.1| 30S ribosomal protein S13 [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 118
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 26/127 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G GR S VLK+A ++ + R + +++E++KI
Sbjct: 7 VDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTDDEINKI---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++I++G + L ++R ++RL I+ +RG+RH L VRGQ
Sbjct: 57 ----------REIING------IKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQ 100
Query: 123 HTKTTGR 129
+KT R
Sbjct: 101 SSKTNAR 107
>gi|32266899|ref|NP_860931.1| 30S ribosomal protein S13 [Helicobacter hepaticus ATCC 51449]
gi|81665564|sp|Q7VGC2.1|RS13_HELHP RecName: Full=30S ribosomal protein S13
gi|32262951|gb|AAP77997.1| ribosomal protein S13 [Helicobacter hepaticus ATCC 51449]
Length = 120
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 29/132 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
K++V +ALT I G G + S +LK +I +KR + SE+EV I KI +
Sbjct: 12 KKRVEYALTYIYGIGLKSSQDILKAVNISFDKRVSDLSEDEVSSIAK--------KIQES 63
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
++ V+G L K+ D++ L + ++RG+RH GL VRGQ TK
Sbjct: 64 YM------VEG-----------DLRKKVTMDIKSLMDLGSYRGLRHRKGLPVRGQTTKNN 106
Query: 128 GR----RGRTVG 135
R + +TVG
Sbjct: 107 ARTRKGKKKTVG 118
>gi|260893347|ref|YP_003239444.1| 30S ribosomal protein S13 [Ammonifex degensii KC4]
gi|260865488|gb|ACX52594.1| 30S ribosomal protein S13 [Ammonifex degensii KC4]
Length = 123
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G GR + +L+K ++ + R + +E+E+ +I
Sbjct: 13 KRVEIALTYIYGIGRSSAKKILEKTGVNPDTRVKDLTEDEIARI---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
++++D +Y L ++ ++ RL IR +RG+RH GL VRGQ T+T
Sbjct: 57 ----REVIDKEYK-----VEGDLRREIAMNIRRLIDIRCYRGIRHIRGLPVRGQRTRTNA 107
Query: 129 --RRG--RTVGVSKKK 140
R+G RTVGV +KK
Sbjct: 108 RTRKGPRRTVGVKRKK 123
>gi|313884421|ref|ZP_07818182.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620205|gb|EFR31633.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8]
Length = 120
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 26/121 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V+ +LT I G G++ + +L +A++ + R + + EE+D+I
Sbjct: 13 KRVVISLTYIFGIGKKTAQNILAEANVSEDTRVKDLTNEELDRI---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+ I+DG + L +R D++RL++I ++RG+RH GL VRGQ+TK
Sbjct: 57 ----RQIIDG------IKVEGDLRRDIRMDIKRLQEIGSYRGLRHRRGLPVRGQNTKNNA 106
Query: 129 R 129
R
Sbjct: 107 R 107
>gi|408671924|ref|YP_006871672.1| 30S ribosomal protein S13 [Emticicia oligotrophica DSM 17448]
gi|387853548|gb|AFK01645.1| 30S ribosomal protein S13 [Emticicia oligotrophica DSM 17448]
Length = 124
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 27/139 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+I K++ ALT I G GR S +L KA++ +K+AGE ++ E + I I+
Sbjct: 7 DIPDKKRGEIALTYIYGIGRSSSQKILTKANVSFDKKAGEWNDSEANAIRGIIAEE---- 62
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+T QL S+++ ++RL I +RG+RH GL +RGQ
Sbjct: 63 ---------------------MTVEGQLRSEVQLAIKRLMDIGCYRGVRHRKGLPLRGQR 101
Query: 124 TKTTG--RRGRTVGVSKKK 140
TK R+G+ V+ KK
Sbjct: 102 TKNNSRTRKGKRKTVANKK 120
>gi|187734946|ref|YP_001877058.1| 30S ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835]
gi|226712685|sp|B2UNG5.1|RS13_AKKM8 RecName: Full=30S ribosomal protein S13
gi|187424998|gb|ACD04277.1| ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835]
Length = 125
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 28/144 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
T I ++++ +L I G GR S +L++A I+ + R G+ ++E++ KI+ ++T
Sbjct: 5 FGTEIPNEKRIEASLPYIYGIGRSTSKRILEQAGINPDIRTGQLTDEQLTKIVQVITT-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
D L ++G L + + L+RL I +RG RH GL VR
Sbjct: 63 -----DGIL------IEG-----------DLRREKQSILKRLTSINCYRGQRHRRGLPVR 100
Query: 121 GQHTKTTGR----RGRTVGVSKKK 140
GQ T+T R + +TVG KK
Sbjct: 101 GQRTRTNARTRKGKKKTVGAQAKK 124
>gi|420466078|ref|ZP_14964841.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-6]
gi|393079626|gb|EJB80358.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-6]
Length = 120
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ DI +KR E SE+EV I
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKSSREILEAVDISFDKRVHELSEDEVSSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L V+G L K++ D++ L + +RG+RH GL VRGQ
Sbjct: 59 KIQQSYL------VEG-----------DLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|312130525|ref|YP_003997865.1| 30S ribosomal protein S13 [Leadbetterella byssophila DSM 17132]
gi|311907071|gb|ADQ17512.1| SSU ribosomal protein S13P [Leadbetterella byssophila DSM 17132]
Length = 124
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 25/127 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I K++ +LT I G GR + +L +A++ ++K+AGE S++E + I I++N ++
Sbjct: 6 VDIPDKKRGEISLTYIYGIGRSTAKHILSQANVSVDKKAGEWSDDEANAIRAIISN--EF 63
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+ L S+++ ++RL I +RG+RH GL +RGQ
Sbjct: 64 KVE-----------------------GALRSEVQLSIKRLMDIGCYRGLRHRKGLPLRGQ 100
Query: 123 HTKTTGR 129
TK R
Sbjct: 101 KTKNNSR 107
>gi|317050552|ref|YP_004111668.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5]
gi|316945636|gb|ADU65112.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5]
Length = 120
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 30/134 (22%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR S +L ID++K+ GE SE+EV+ T+ +Y +
Sbjct: 13 KRVEIGLTYIYGVGRSRSRQILANVSIDMDKKVGELSEDEVN---TLRKALEEYDV---- 65
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L + D++RLK + +RG+RH GL VRGQ+TK
Sbjct: 66 -------------------EGDLRKNVSLDIKRLKDLGCYRGLRHRSGLPVRGQNTKNNS 106
Query: 129 --RRG--RTVGVSK 138
R+G RTVG K
Sbjct: 107 RTRKGPKRTVGKKK 120
>gi|373106823|ref|ZP_09521123.1| 30S ribosomal protein S13 [Stomatobaculum longum]
gi|371651762|gb|EHO17188.1| 30S ribosomal protein S13 [Stomatobaculum longum]
Length = 122
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G G SN +L +A +D N R + +++EV KI ++
Sbjct: 12 EKRVEIGLTYIYGIGVTSSNRILSQAGVDPNTRVKDLTDDEVKKIAEVIA---------- 61
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+ +V+G L ++ D++RL +I +RG+RH GL VRGQ TKT
Sbjct: 62 ----ETQVVEG-----------DLRRQIAMDIKRLTEIGCYRGIRHRKGLPVRGQRTKTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|119029440|gb|ABL59937.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 119
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 30/140 (21%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ NI K+ V LT+I G GR ++ + + A ++ + G +EEE+DKI
Sbjct: 5 VGVNIPVKKHVEIGLTSIYGIGRVSASKICQVAGVNPQTKVGSLTEEELDKI-------- 56
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ +I + T+ L ++ +++RL +I A+RG+RH GL VR
Sbjct: 57 RVEINKY------------------TTEGDLRREVAMNVKRLIEIGAYRGLRHRRGLPVR 98
Query: 121 GQHTKTTGR----RGRTVGV 136
GQ TKT R +GR + V
Sbjct: 99 GQRTKTNARTRKGKGRRIAV 118
>gi|254446003|ref|ZP_05059479.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235]
gi|198260311|gb|EDY84619.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235]
Length = 123
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I +K+ ++L I G G S +L + ID + RA EE+++ I+
Sbjct: 5 LGVDIPANKKLEYSLRYIYGIGPTRSKTILAQTGIDPDMRAKNLDEEQINAIM------- 57
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
K ++ L L +L +++RL+ I +RG+RH GL VR
Sbjct: 58 -----------------AKIQELQLVVEGDLRRELTSNMKRLQAINCYRGLRHRRGLPVR 100
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 101 GQRTKTNAR 109
>gi|374852382|dbj|BAL55316.1| 30S ribosomal protein S13 [uncultured Chlorobi bacterium]
Length = 125
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 26/118 (22%)
Query: 12 MFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNR 71
ALT I G GR + VLK+A++D K+ E ++EE+ +I +++ + YK+
Sbjct: 16 FIALTYIYGIGRTRALEVLKRAEVDPMKKVMEWTDEEIARIRSVIQD---YKV------- 65
Query: 72 QKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
QL S+++ +++RL I +RG+RH GL VRGQ T+T R
Sbjct: 66 ----------------EGQLRSEVQMNIKRLIDIGCYRGLRHKMGLPVRGQRTRTNAR 107
>gi|283780397|ref|YP_003371152.1| 30S ribosomal protein S13 [Pirellula staleyi DSM 6068]
gi|283438850|gb|ADB17292.1| ribosomal protein S13 [Pirellula staleyi DSM 6068]
Length = 127
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I + + +L + G G + + +KA ID KRA + SEEE+ ++ T++ R
Sbjct: 5 LGVDIPNDKPTVISLGYLYGVGDHVARELCQKAGIDTEKRARDLSEEELARLATLLE--R 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Y T L +++++ RL+ I+ +RG+RH GL VR
Sbjct: 63 DY-----------------------TVEGPLRRLVQQNINRLRDIKCYRGIRHRLGLPVR 99
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 100 GQRTKTNAR 108
>gi|336436016|ref|ZP_08615729.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 1_4_56FAA]
gi|336008056|gb|EGN38075.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 1_4_56FAA]
Length = 122
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR +N +L +A ID + R + ++E+V KI
Sbjct: 13 KRVEIGLTYIYGIGRTSANRILAEAGIDPSTRVRDLTQEDVKKI---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+I+D SQ++ L +++ +++RLK+I +RG+RH GL VRGQ TKT
Sbjct: 57 ----SEIIDA--SQVV---EGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|58699348|ref|ZP_00374121.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534134|gb|EAL58360.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 122
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 27/132 (20%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
NI ++ V FALT I G G +N++ ++D KR E +E+++KI + +
Sbjct: 8 NIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFI------- 60
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ- 122
RQ +++G +L ++ +++ L ++ +RG+RH GL VRGQ
Sbjct: 61 -------RQNYVIEG-----------ELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQR 102
Query: 123 -HTKTTGRRGRT 133
HT R+GR+
Sbjct: 103 THTNAKTRKGRS 114
>gi|299143169|ref|ZP_07036249.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298517654|gb|EFI41393.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 120
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 36/139 (25%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR+ S +L AD++ + R + +E E+ +I
Sbjct: 12 EKRVEIGLTYIYGIGRKRSQEILTNADVNFDTRVKDLTESELARI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDL----ERLKKIRAHRGMRHYWGLRVRGQH 123
+D +D KY ++ LR D+ +RLK+I +RGMRH GL VRGQ
Sbjct: 57 -----RDEID-KY---------HVEGDLRRDIAMNIKRLKEINCYRGMRHKKGLPVRGQK 101
Query: 124 TKTTG--RRGRTVGVSKKK 140
TKT R+G VSKKK
Sbjct: 102 TKTNARTRKGPKKLVSKKK 120
>gi|157737263|ref|YP_001489946.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018]
gi|315636980|ref|ZP_07892204.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22]
gi|384155675|ref|YP_005538490.1| 30S ribosomal protein S13 [Arcobacter butzleri ED-1]
gi|166991598|sp|A8ETK3.1|RS13_ARCB4 RecName: Full=30S ribosomal protein S13
gi|157699117|gb|ABV67277.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018]
gi|315478810|gb|EFU69519.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22]
gi|345469229|dbj|BAK70680.1| 30S ribosomal protein S13 [Arcobacter butzleri ED-1]
Length = 122
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 29/141 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K+++ +ALT I G G S ++L ID NKRA E +E+E I +
Sbjct: 7 VDLPNKKRMEYALTYIYGIGLHNSRLILNAVGIDFNKRAFELTEDEAAAI--------RK 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+I + ++ V+G L K+ D++ L + ++RG+RH GL RGQ
Sbjct: 59 EIQENYM------VEG-----------DLRKKVAMDIKSLMDLGSYRGLRHRKGLPCRGQ 101
Query: 123 HTKTTGR----RGRTVGVSKK 139
TKT R + +TVG + K
Sbjct: 102 KTKTNARTRKGKKKTVGAATK 122
>gi|374308525|ref|YP_005054956.1| 30S ribosomal protein S13 [Filifactor alocis ATCC 35896]
gi|291166854|gb|EFE28900.1| 30S ribosomal protein S13 [Filifactor alocis ATCC 35896]
Length = 121
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 30/136 (22%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +LK I+ + R + +EEEV+ + K D
Sbjct: 12 EKRVEIGLTYIFGIGRPTSNKILKDTGINPDTRIKDLTEEEVNTL---------RKAIDN 62
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+L V+G L ++ +++RL+ IR +RG+RH GL VRGQ TKT
Sbjct: 63 YL------VEG-----------DLRREISLNIKRLRDIRCYRGIRHMKGLPVRGQKTKTN 105
Query: 128 GR----RGRTVGVSKK 139
R RTVG KK
Sbjct: 106 ARTRKGSKRTVGRKKK 121
>gi|421880794|ref|ZP_16312154.1| SSU ribosomal protein S13p (S18e) [Helicobacter bizzozeronii CCUG
35545]
gi|375317004|emb|CCF80150.1| SSU ribosomal protein S13p (S18e) [Helicobacter bizzozeronii CCUG
35545]
Length = 120
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 31/138 (22%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKII-TIMTNPRQ 61
++ K++V +ALT I G G + S +L K I L+KR E SE+EV I I N
Sbjct: 7 VDLPKKKRVEYALTYIYGVGLKSSRDILAKVQISLDKRVHELSEDEVSSITKEIQANY-- 64
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+V+G L K++ D++ L + ++RG+RH GL VRG
Sbjct: 65 -------------VVEG-----------DLRKKVQMDIKALMDLGSYRGIRHRKGLPVRG 100
Query: 122 QHTKTTGR----RGRTVG 135
Q TK R + +TVG
Sbjct: 101 QTTKNNARTRKGKKKTVG 118
>gi|392968764|ref|ZP_10334180.1| 30S ribosomal protein S13 [Fibrisoma limi BUZ 3]
gi|387843126|emb|CCH56234.1| 30S ribosomal protein S13 [Fibrisoma limi BUZ 3]
Length = 125
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 27/139 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+I K++ ALT I G GR + +L A I ++K+A E ++EE + ++N +YK
Sbjct: 8 DIPDKKRGEIALTYIYGIGRSRAKKILTDAGISVDKKASEWTDEESSAVRNAISN--EYK 65
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+ L S+++ ++RL I +RG+RH GL VRGQH
Sbjct: 66 VE-----------------------GALRSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQH 102
Query: 124 TKTTG--RRGRTVGVSKKK 140
TK R+G+ V+ KK
Sbjct: 103 TKNNSRTRKGKRKTVANKK 121
>gi|336453195|ref|YP_004607661.1| 30S ribosomal protein S13 [Helicobacter bizzozeronii CIII-1]
gi|335333222|emb|CCB79949.1| SSU ribosomal protein S13p (S18e) [Helicobacter bizzozeronii
CIII-1]
Length = 120
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 31/138 (22%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKII-TIMTNPRQ 61
++ K++V +ALT I G G + S +L K I L+KR E SE+EV I I N
Sbjct: 7 VDLPKKKRVEYALTYIYGVGLKSSRDILAKVQISLDKRVHELSEDEVSSITKEIQANY-- 64
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+V+G L K++ D++ L + ++RG+RH GL VRG
Sbjct: 65 -------------VVEG-----------DLRKKVQMDIKALMDLGSYRGIRHRKGLPVRG 100
Query: 122 QHTKTTGR----RGRTVG 135
Q TK R + +TVG
Sbjct: 101 QTTKNNARTRKGKKKTVG 118
>gi|257126745|ref|YP_003164859.1| 30S ribosomal protein S13 [Leptotrichia buccalis C-1013-b]
gi|260891352|ref|ZP_05902615.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254]
gi|257050684|gb|ACV39868.1| ribosomal protein S13 [Leptotrichia buccalis C-1013-b]
gi|260858735|gb|EEX73235.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254]
Length = 121
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 26/127 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V +LT I G GR SN +L ID + R + +EE+V K+ + +Y
Sbjct: 7 VDIPRNKRVEVSLTYIFGIGRSTSNKILGATGIDRDTRVKDLTEEQVAKLRAAVE---EY 63
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L ++R +++RL I+++RG+RH GL VRGQ
Sbjct: 64 KI-----------------------EGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQ 100
Query: 123 HTKTTGR 129
TKT R
Sbjct: 101 KTKTNAR 107
>gi|384172589|ref|YP_005553966.1| 30S ribosomal protein S13 [Arcobacter sp. L]
gi|345472199|dbj|BAK73649.1| 30S ribosomal protein S13 [Arcobacter sp. L]
Length = 122
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 29/141 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K+++ +ALT I G G S ++L ID NKRA E SE+E I +
Sbjct: 7 VDLPNKKRMEYALTYIYGIGLHNSRLILDAVGIDYNKRAFELSEDEAATI--------RK 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+I + ++ V+G L K+ D++ L + ++RG+RH GL RGQ
Sbjct: 59 EIQENYM------VEG-----------DLRKKVAMDIKALMDLGSYRGLRHRKGLPCRGQ 101
Query: 123 HTKTTGR----RGRTVGVSKK 139
TKT R + +TVG + K
Sbjct: 102 KTKTNARTRKGKKKTVGAATK 122
>gi|375147680|ref|YP_005010121.1| 30S ribosomal protein S13 [Niastella koreensis GR20-10]
gi|361061726|gb|AEW00718.1| 30S ribosomal protein S13 [Niastella koreensis GR20-10]
Length = 126
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 25/117 (21%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
LT I G GR S +L KA I L+K+ + +++E++ I I+TN
Sbjct: 17 IGLTYIFGIGRATSQYILTKAGIPLDKKVHQWNDDELNAIRNIITNE------------- 63
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
L QL S+++ ++RL I +RG+RH GL VRGQ T+T R
Sbjct: 64 ------------LKVEGQLRSEVQMSIKRLLDIACYRGLRHRKGLPVRGQRTRTNSR 108
>gi|340758492|ref|ZP_08695078.1| 30S ribosomal protein S13 [Fusobacterium varium ATCC 27725]
gi|251836727|gb|EES65261.1| 30S ribosomal protein S13 [Fusobacterium varium ATCC 27725]
Length = 118
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 34/131 (25%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G G+ S VL +A ++ + R + +EEEV+KI I+
Sbjct: 7 VDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIRAII------ 60
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGLR 118
T +++ LR+D ++RL I+ +RG+RH L
Sbjct: 61 ------------------------ETVKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLP 96
Query: 119 VRGQHTKTTGR 129
VRGQ +KT R
Sbjct: 97 VRGQSSKTNAR 107
>gi|225026388|ref|ZP_03715580.1| hypothetical protein EUBHAL_00637 [Eubacterium hallii DSM 3353]
gi|224956277|gb|EEG37486.1| 30S ribosomal protein S13 [Eubacterium hallii DSM 3353]
Length = 122
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR ++ +LK AD++ + R + +++EV
Sbjct: 12 EKRVEIGLTYIYGIGRTSADQILKAADVNPDTRVRDLTDDEV------------------ 53
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
R DI++ Y T L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 54 --RRLSDIINADY-----TVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|333980384|ref|YP_004518329.1| 30S ribosomal protein S13 [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823865|gb|AEG16528.1| 30S ribosomal protein S13 [Desulfotomaculum kuznetsovii DSM 6115]
Length = 123
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G GR S +L + I+ + R +E+EV
Sbjct: 13 KRVEIALTYIYGIGRPTSRKILAQTGINPDTRVRNLTEDEV------------------- 53
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
NR +D+++ Y +L ++ +++RL +I +RG+RH GL VRGQ TKT
Sbjct: 54 -NRLRDVIEKNYR-----VEGELRREVAMNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNA 107
Query: 129 --RRG--RTVGVSKKK 140
R+G +TVGV +KK
Sbjct: 108 RTRKGPRKTVGVRRKK 123
>gi|373499236|ref|ZP_09589727.1| 30S ribosomal protein S13 [Fusobacterium sp. 12_1B]
gi|404369352|ref|ZP_10974692.1| 30S ribosomal protein S13 [Fusobacterium ulcerans ATCC 49185]
gi|313690736|gb|EFS27571.1| 30S ribosomal protein S13 [Fusobacterium ulcerans ATCC 49185]
gi|371959307|gb|EHO76998.1| 30S ribosomal protein S13 [Fusobacterium sp. 12_1B]
Length = 118
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 34/131 (25%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G G+ S VL +A ++ + R + +EEEV+KI I+
Sbjct: 7 VDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIRAIV------ 60
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGLR 118
T +++ LR+D ++RL I+ +RG+RH L
Sbjct: 61 ------------------------ETVKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLP 96
Query: 119 VRGQHTKTTGR 129
VRGQ +KT R
Sbjct: 97 VRGQSSKTNAR 107
>gi|42520509|ref|NP_966424.1| 30S ribosomal protein S13 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|81652512|sp|Q73HA7.1|RS13_WOLPM RecName: Full=30S ribosomal protein S13
gi|42410248|gb|AAS14358.1| ribosomal protein S13 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 122
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 27/132 (20%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
NI ++ V FALT I G G +N++ ++D KR E +E+++KI
Sbjct: 8 NIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKI----------- 56
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ- 122
F+ RQ +++G +L ++ +++ L ++ +RG+RH GL VRGQ
Sbjct: 57 --SGFI-RQNYVIEG-----------ELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQR 102
Query: 123 -HTKTTGRRGRT 133
HT R+GR+
Sbjct: 103 THTNAKTRKGRS 114
>gi|331088681|ref|ZP_08337591.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439564|ref|ZP_08619175.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 1_1_57FAA]
gi|330407204|gb|EGG86707.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015793|gb|EGN45595.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 1_1_57FAA]
Length = 122
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR ++ +L A +D N R + + EEV KI ++
Sbjct: 13 KRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVID----------- 61
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+ +V+G L +++ +++RLK+I +RG+RH GL VRGQ TKT
Sbjct: 62 ---ETQVVEG-----------DLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|436838691|ref|YP_007323907.1| 30S ribosomal protein S13 [Fibrella aestuarina BUZ 2]
gi|384070104|emb|CCH03314.1| 30S ribosomal protein S13 [Fibrella aestuarina BUZ 2]
Length = 125
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I K++ +LT I G GR + +L KA +D NK+ E ++EE + + I++ ++
Sbjct: 7 VDIPDKKRGAISLTYIFGIGRSAAVTILTKAGVDANKKVAEWNDEESNAVRNIIS--EEF 64
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+ L S+++ +++RL I +RG+RH GL VRGQ
Sbjct: 65 KVE-----------------------GALKSEVQLNIKRLMDIGCYRGLRHRKGLPVRGQ 101
Query: 123 HTKTTG--RRGRTVGVSKKK 140
TK R+G+ V+ KK
Sbjct: 102 KTKNNSRTRKGKRKTVANKK 121
>gi|340751228|ref|ZP_08688051.1| 30S ribosomal protein S13 [Fusobacterium mortiferum ATCC 9817]
gi|229421748|gb|EEO36795.1| 30S ribosomal protein S13 [Fusobacterium mortiferum ATCC 9817]
Length = 118
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 26/127 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I ++V ALT I G G+ S +L +A I+ + R + +EEEV+KI I+ +
Sbjct: 7 VDIPRNKRVEIALTYIYGIGKPTSQKILTEAGINFDTRVKDLTEEEVNKIRAIVETIK-- 64
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
V+G L ++R ++RL I+ +RG+RH L VRGQ
Sbjct: 65 -------------VEG-----------DLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQ 100
Query: 123 HTKTTGR 129
+KT R
Sbjct: 101 SSKTNAR 107
>gi|260589252|ref|ZP_05855165.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583]
gi|331082660|ref|ZP_08331783.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540333|gb|EEX20902.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583]
gi|330400279|gb|EGG79921.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 123
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 24/122 (19%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +L+KA ++ + R + ++EEV KI
Sbjct: 12 EKRVEIGLTYIYGIGRVTSNRILEKAGVNPDTRVRDVTDEEVGKI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+D ++ ++ + L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 57 -----RDAIE----ELQIPVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTN 107
Query: 128 GR 129
R
Sbjct: 108 AR 109
>gi|53803438|ref|YP_114766.1| 30S ribosomal protein S13 [Methylococcus capsulatus str. Bath]
gi|81681371|sp|Q605D4.1|RS13_METCA RecName: Full=30S ribosomal protein S13
gi|53757199|gb|AAU91490.1| ribosomal protein S13 [Methylococcus capsulatus str. Bath]
Length = 118
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 26/128 (20%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
NI + V+ +LTAI G GR + ++ K A I+ +K+ E S+E+V+++
Sbjct: 6 GVNIPDHKHVLISLTAIYGIGRTRAGLICKNAGIETDKKVRELSDEQVERL--------- 56
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
G+ ++ ++ L ++ +++RL + ++RGMRH GL VRG
Sbjct: 57 ---------------RGEVAKFVV--EGDLRREVAMNIKRLMDLGSYRGMRHRRGLPVRG 99
Query: 122 QHTKTTGR 129
Q T+T R
Sbjct: 100 QRTRTNAR 107
>gi|119953289|ref|YP_945498.1| 30S ribosomal protein S13 [Borrelia turicatae 91E135]
gi|254811131|sp|A1QZT6.1|RS13_BORT9 RecName: Full=30S ribosomal protein S13
gi|119862060|gb|AAX17828.1| SSU ribosomal protein S13P [Borrelia turicatae 91E135]
Length = 125
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 27/139 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++ +++ ALT+I G GR + + +K DI KRA + +EV+K+ I+ +
Sbjct: 8 DLPNNKQLQIALTSIYGIGRARALEICRKTDILPEKRAKDLDNDEVNKLRKIIES----- 62
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
D+ +V+GK L S+L ++RL I +RG+RH GL +RGQ
Sbjct: 63 --DY-------VVEGK-----------LRSELAMSIKRLMDIACYRGLRHRKGLPLRGQR 102
Query: 124 TKTTG--RRGRTVGVSKKK 140
TKT R+G+ V+ KK
Sbjct: 103 TKTNARTRKGKRKTVANKK 121
>gi|153816226|ref|ZP_01968894.1| hypothetical protein RUMTOR_02475 [Ruminococcus torques ATCC 27756]
gi|317501798|ref|ZP_07959984.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|145846409|gb|EDK23327.1| 30S ribosomal protein S13 [Ruminococcus torques ATCC 27756]
gi|316896831|gb|EFV18916.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA]
Length = 127
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR ++ +L A +D N R + + EEV KI ++
Sbjct: 18 KRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVID----------- 66
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+ +V+G L +++ +++RLK+I +RG+RH GL VRGQ TKT
Sbjct: 67 ---ETQVVEG-----------DLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNA 112
Query: 129 R 129
R
Sbjct: 113 R 113
>gi|406885864|gb|EKD32977.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 128
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 25/126 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
NI ++V+ ALT+I G G S VL + +D+N + + SE +V+ I + K
Sbjct: 8 NIPQNKRVVIALTSIYGVGLSRSKKVLAECAVDINTKVKDLSEAQVNLI--------REK 59
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
I F ++G +L +++ ++ RLK+I ++RG RH L VRGQ
Sbjct: 60 IEKQFK------LEG-----------ELQREVQSNIRRLKEIGSYRGERHKKSLPVRGQR 102
Query: 124 TKTTGR 129
TKT R
Sbjct: 103 TKTNSR 108
>gi|408355511|ref|YP_006844042.1| 30S ribosomal protein S13 [Amphibacillus xylanus NBRC 15112]
gi|407726282|dbj|BAM46280.1| 30S ribosomal protein S13 [Amphibacillus xylanus NBRC 15112]
Length = 120
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 28/139 (20%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+I +++++ +LT I G G + +L+KA++ + R + +E+E+ +I TI+ +Y
Sbjct: 8 DIPREKRIVISLTYIYGIGNSTAEKILEKANVSADTRVRDLTEDELGRIRTIVN---EY- 63
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
T+ L ++ +++RL +I ++RG+RH GL VRGQ+
Sbjct: 64 ----------------------TTEGDLRREVSLNIKRLVEIGSYRGLRHRRGLPVRGQN 101
Query: 124 TKTTG--RRGRTVGVSKKK 140
TK R+GR VS KK
Sbjct: 102 TKNNARTRKGRGRAVSNKK 120
>gi|399155798|ref|ZP_10755865.1| 30S ribosomal protein S13 [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 122
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 28/135 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR+ SN +L KA ID N R + E++V+KI TI+ ++Y++
Sbjct: 13 KRVEIGLTYIFGVGRKVSNDILLKAKIDKNVRVRDLDEDQVNKIRTIIE--KEYQV---- 66
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L ++ +++RL + +RG+RH + VRGQ TKT
Sbjct: 67 -------------------EGDLRREVSLNIKRLMDLGNYRGLRHRKHMPVRGQRTKTNA 107
Query: 129 RR---GRTVGVSKKK 140
R R + VSK K
Sbjct: 108 RTRKGPRRLAVSKNK 122
>gi|319789263|ref|YP_004150896.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1]
gi|317113765|gb|ADU96255.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1]
Length = 126
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+I +KV ++L I G G + + +KA +D KR + +EEE+ KI I+ N +
Sbjct: 6 GVDIPDNKKVPYSLAYIYGIGIKSGFKICEKAGVDPEKRVKDLTEEEIAKIRRIIEN--E 63
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YK+ L ++ +++RL +I +RG+RH GL VRG
Sbjct: 64 YKV-----------------------EGDLRKEIAMNIKRLIEIGCYRGVRHRLGLPVRG 100
Query: 122 QHTKTTGR 129
Q T+T R
Sbjct: 101 QRTRTNAR 108
>gi|406873799|gb|EKD23880.1| hypothetical protein ACD_81C00159G0002 [uncultured bacterium]
Length = 127
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ NI ++V +ALT I G G+ S+ +L I +K+A + + EE+ KI
Sbjct: 4 VGVNIPDNKRVEYALTYIHGIGKTSSDAILAATGIPADKKAKDLTPEEMKKI-------- 55
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
++ K V+G+ Q++ T+ A RLK+I +RG RH L R
Sbjct: 56 ----QEYVEKNCK--VEGELRQVIKTNVA-----------RLKEINCYRGTRHMKKLPTR 98
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 99 GQRTKTNSR 107
>gi|338734004|ref|YP_004672477.1| 30S ribosomal protein S13 [Simkania negevensis Z]
gi|336483387|emb|CCB89986.1| 30S ribosomal protein S13 [Simkania negevensis Z]
Length = 126
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I G +++ +LT I G GR + V++K +D N RA +E E+ K+ I+
Sbjct: 5 IGNDIPGNKRLAISLTYIYGIGRALAQEVIEKLGLDPNMRAHNLTEAEISKLNAIL---- 60
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ + +V+G L +++ +++RL I +RG RH GL +R
Sbjct: 61 ----------QTEYVVEG-----------DLRRQVQNNIKRLISINCYRGTRHRSGLPLR 99
Query: 121 GQHTKTTGR 129
GQ T+ R
Sbjct: 100 GQRTRCNAR 108
>gi|297621701|ref|YP_003709838.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044]
gi|297377002|gb|ADI38832.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044]
Length = 122
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ T+I ++++ +LT I G G + +++K +D N RA +E+++ KI T++ N
Sbjct: 5 IGTDIPDNKRLIISLTYIYGIGPFKAKEIIEKLQLDPNMRARGLTEDDIAKINTLLQN-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
D+ IV+G L +++ +++RL I +RG+RH GL VR
Sbjct: 63 -----DY-------IVEG-----------DLRRQVQNNIKRLISINCYRGIRHRSGLPVR 99
Query: 121 GQHTKTTGR 129
GQ T++ R
Sbjct: 100 GQRTQSNAR 108
>gi|217967393|ref|YP_002352899.1| 30S ribosomal protein S13 [Dictyoglomus turgidum DSM 6724]
gi|226712734|sp|B8E1F7.1|RS13_DICTD RecName: Full=30S ribosomal protein S13
gi|217336492|gb|ACK42285.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724]
Length = 124
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 29/142 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ +KV ALT I G GR S +L+ +D NKR + +EEE+ K+ + N Y
Sbjct: 7 VDLPSNKKVEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEIEN--NY 64
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+ L ++ ++ RL +I +RG+RH GL VRGQ
Sbjct: 65 KV-----------------------EGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQ 101
Query: 123 HTKTTG--RRG--RTVGVSKKK 140
T+ R+G +TVG +K+
Sbjct: 102 RTRCNARTRKGPRKTVGAKRKE 123
>gi|343085288|ref|YP_004774583.1| 30S ribosomal protein S13 [Cyclobacterium marinum DSM 745]
gi|342353822|gb|AEL26352.1| 30S ribosomal protein S13 [Cyclobacterium marinum DSM 745]
Length = 125
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 28/137 (20%)
Query: 6 DGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIP 65
D KR V+ LT I G GR + +L KA I L+K+AGE +++E I I++ ++K
Sbjct: 11 DNKRGVI-GLTYIFGIGRSTAKAILDKAGISLDKKAGEWTDDESTAIRNIISE--EFK-- 65
Query: 66 DWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTK 125
++ +L S QL ++RL I +RG+RH GL VRGQ TK
Sbjct: 66 ---------------TEGVLKSEVQLS------IKRLMDIGCYRGLRHRKGLPVRGQKTK 104
Query: 126 TTG--RRGRTVGVSKKK 140
R+G+ V+ KK
Sbjct: 105 NNARTRKGKRKTVANKK 121
>gi|313143761|ref|ZP_07805954.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818]
gi|386761339|ref|YP_006234974.1| 30S ribosomal protein S13 [Helicobacter cinaedi PAGU611]
gi|313128792|gb|EFR46409.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818]
gi|385146355|dbj|BAM11863.1| 30S ribosomal protein S13 [Helicobacter cinaedi PAGU611]
gi|396078479|dbj|BAM31855.1| 30S ribosomal protein S13 [Helicobacter cinaedi ATCC BAA-847]
Length = 120
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +LK +I +KR + SE+EV I
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKSSRDILKAVNISFDKRVFDLSEDEVSSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI + ++ V+G L K+ D++ L + ++RG+RH GL VRGQ
Sbjct: 59 KIQESYM------VEG-----------DLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|257784938|ref|YP_003180155.1| 30S ribosomal protein S13 [Atopobium parvulum DSM 20469]
gi|257473445|gb|ACV51564.1| ribosomal protein S13 [Atopobium parvulum DSM 20469]
Length = 122
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 29/135 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT + G G+ + V + ID+N R + +EEEV KI
Sbjct: 13 KRVEVGLTYLYGIGQTRATKVCNETGIDVNTRVKDLTEEEVTKI---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+D +D Y T+ L ++R+++ RL +I +RG+RH GL V GQ T T
Sbjct: 57 ----RDYIDANY-----TTEGDLRREVRQNVARLMEIGCYRGLRHRKGLPVHGQRTHTNA 107
Query: 129 R----RGRTVGVSKK 139
R + R VG KK
Sbjct: 108 RTRKGKKRQVGGKKK 122
>gi|406927339|gb|EKD63382.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 126
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 34/143 (23%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY- 62
N+ ++++ LT + G GRR S +L +I+ N + + SE +V+K+ R Y
Sbjct: 8 NLPSEKRIEVGLTYVYGIGRRLSAKILDDLNINRNVKVKDLSEADVNKL-------RDYI 60
Query: 63 -KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
K+P + L K+ D++RL+ I ++RG RH L VRG
Sbjct: 61 AKLP---------------------TEGDLRRKISLDVKRLQDIGSYRGYRHRRRLPVRG 99
Query: 122 QHTKTTGR--RGR--TVGVSKKK 140
Q TKT R RGR T+G KKK
Sbjct: 100 QRTKTNARTKRGRRVTMGSGKKK 122
>gi|347533170|ref|YP_004839933.1| 30S ribosomal protein S13 [Roseburia hominis A2-183]
gi|345503318|gb|AEN98001.1| 30S ribosomal protein S13 [Roseburia hominis A2-183]
Length = 122
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +L +A +D N R + +++EV +I ++
Sbjct: 12 EKRVEIGLTYIYGIGRTSSNRILAEAKVDPNTRVRDLTDDEVKRISAVIDE--------- 62
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
SQ T L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 63 -------------SQ---TVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|338211180|ref|YP_004655233.1| 30S ribosomal protein S13 [Runella slithyformis DSM 19594]
gi|336304999|gb|AEI48101.1| 30S ribosomal protein S13 [Runella slithyformis DSM 19594]
Length = 125
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 27/140 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I K++ +LT I G GR + +L+KA I+ +K+ E S+EE + +
Sbjct: 7 VDIPDKKRGEISLTYIYGIGRSSARKILEKAGINFDKKVAEWSDEESNAV---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+ I++G+++ + L S+++ ++RL I +RG+RH GL VRGQ
Sbjct: 57 ----------RGIINGEFN-----TEGALRSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQ 101
Query: 123 HTKTTG--RRGRTVGVSKKK 140
TK R+G+ V+ KK
Sbjct: 102 RTKNNSRTRKGKRKTVANKK 121
>gi|203284410|ref|YP_002222150.1| 30S ribosomal protein S13 [Borrelia duttonii Ly]
gi|203287944|ref|YP_002222959.1| 30S ribosomal protein S13 [Borrelia recurrentis A1]
gi|386859732|ref|YP_006272438.1| 30S ribosomal protein S13 [Borrelia crocidurae str. Achema]
gi|226712699|sp|B5RM58.1|RS13_BORDL RecName: Full=30S ribosomal protein S13
gi|226712702|sp|B5RPK4.1|RS13_BORRA RecName: Full=30S ribosomal protein S13
gi|201083853|gb|ACH93444.1| 30S ribosomal protein S13 [Borrelia duttonii Ly]
gi|201085164|gb|ACH94738.1| 30S ribosomal protein S13 [Borrelia recurrentis A1]
gi|384934613|gb|AFI31286.1| 30S ribosomal protein S13 [Borrelia crocidurae str. Achema]
Length = 125
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 27/139 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++ +++ ALT+I G GR + + KK I KRA + EEV+K+ I+ +
Sbjct: 8 DLPNNKQLQIALTSIYGIGRSRALEICKKTGILPEKRAKDLDNEEVNKLRKIIES----- 62
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
D+ +V+GK L S+L ++RL I +RG+RH GL +RGQ
Sbjct: 63 --DY-------VVEGK-----------LRSELAMSIKRLMDIACYRGLRHRKGLPLRGQR 102
Query: 124 TKTTG--RRGRTVGVSKKK 140
TKT R+G+ V+ KK
Sbjct: 103 TKTNARTRKGKRKTVANKK 121
>gi|406874471|gb|EKD24417.1| hypothetical protein ACD_81C00024G0002 [uncultured bacterium]
Length = 137
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 29/141 (20%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++ +++V ALT + G GR +LK+A ID +R +EEEV
Sbjct: 8 DLPDEKRVDIALTYLYGVGRSNVVPILKEAKIDAGRRLKTLNEEEV-------------- 53
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
NR IV+ YS L + E ++RL IR++RG RH L RGQ
Sbjct: 54 ------NRLAKIVEKNYS-----VEGDLRRSVSESIKRLIDIRSYRGTRHTKKLPARGQR 102
Query: 124 TKTTGR--RGR--TVGVSKKK 140
T+T R RG+ TVG KK+
Sbjct: 103 TRTNARTKRGKRMTVGALKKE 123
>gi|189501630|ref|YP_001957347.1| 30S ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2]
gi|226712687|sp|B3EUJ9.1|RS13_AMOA5 RecName: Full=30S ribosomal protein S13
gi|189497071|gb|ACE05618.1| ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2]
Length = 126
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I ++ ALT I G GR +N +L A ++ +KR ++EE I T++
Sbjct: 5 LGVDIPDNKRGEIALTYIFGIGRSSANQILAAAGVNKDKRVSSWTDEESQTIRTVIN--E 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YK+ +L S++R +++RL I +RG RH GL VR
Sbjct: 63 NYKVE-----------------------GELKSEIRLNIKRLVDIGCYRGRRHVLGLPVR 99
Query: 121 GQHTKTTGR 129
GQ TK R
Sbjct: 100 GQSTKNNAR 108
>gi|147676680|ref|YP_001210895.1| 30S ribosomal protein S13 [Pelotomaculum thermopropionicum SI]
gi|189044284|sp|A5D5E5.1|RS13_PELTS RecName: Full=30S ribosomal protein S13
gi|146272777|dbj|BAF58526.1| ribosomal protein S13 [Pelotomaculum thermopropionicum SI]
Length = 123
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G G+ S +L ++ ++ + R +EEE++K+
Sbjct: 13 KRVEIALTYIYGIGKPTSQKILAQSGVNPDTRVRNLTEEEINKL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+DI++ Y L ++ +++RL +I +RG+RH GL VRGQ TKT
Sbjct: 57 ----RDIIEKNYK-----VEGDLRREVALNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNA 107
Query: 129 --RRG--RTVGVSKKK 140
R+G +TVGV +KK
Sbjct: 108 RTRKGPRKTVGVRRKK 123
>gi|269115049|ref|YP_003302812.1| 30S ribosomal protein S13 [Mycoplasma hominis ATCC 23114]
gi|268322674|emb|CAX37409.1| 30S ribosomal protein S13 [Mycoplasma hominis ATCC 23114]
Length = 122
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 26/129 (20%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++ I +KV +LT I G G + +LK A++D KR + SEEE+ +I +
Sbjct: 5 LNIEIPNNKKVRISLTYIFGIGVSLAKEILKDANVDGEKRVKDLSEEELTRI---RDEAK 61
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+Y T+ L ++ +++RL +I+++RG+RH GL VR
Sbjct: 62 KY-----------------------TTEGDLRREINLNIKRLMEIKSYRGIRHRKGLPVR 98
Query: 121 GQHTKTTGR 129
GQ TK R
Sbjct: 99 GQSTKKNAR 107
>gi|163760822|ref|ZP_02167901.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43]
gi|162281866|gb|EDQ32158.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43]
Length = 126
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 35/145 (24%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
NI ++V+ ALT I G G +F+ +++K I L++R + S+ EV +I
Sbjct: 10 GVNIPTNKRVIIALTYIHGIGNKFAAEIVEKVGIPLDRRVNQLSDAEVLQI--------- 60
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGL 117
++ +D Y Q++ LR + ++RL + +RG+RH GL
Sbjct: 61 -----------RETIDRDY---------QVEGDLRRENSMNIKRLMDLGCYRGLRHRRGL 100
Query: 118 RVRGQ--HTKTTGRRGRTVGVSKKK 140
VRGQ HT R+G ++ KK
Sbjct: 101 PVRGQRTHTNARTRKGPAKAIAGKK 125
>gi|408906897|emb|CCM12423.1| SSU ribosomal protein S13p (S18e) [Helicobacter heilmannii ASB1.4]
Length = 120
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L K + L+KR E SE+E+ I
Sbjct: 7 VDLPKKKRVEYALTYIYGVGLKSSRDILTKVQVSLDKRVHELSEDEISSI---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+I Q L K++ D++ L + ++RG+RH GL VRGQ
Sbjct: 57 ---------TKEI------QASYVVEGDLRKKVQMDIKALMDLGSYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|300870625|ref|YP_003785496.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000]
gi|404475028|ref|YP_006706459.1| 30S ribosomal protein S13 [Brachyspira pilosicoli B2904]
gi|431808548|ref|YP_007235446.1| 30S ribosomal protein S13 [Brachyspira pilosicoli P43/6/78]
gi|434383099|ref|YP_006704882.1| 30S ribosomal protein S13 [Brachyspira pilosicoli WesB]
gi|300688324|gb|ADK30995.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000]
gi|404431748|emb|CCG57794.1| 30S ribosomal protein S13 [Brachyspira pilosicoli WesB]
gi|404436517|gb|AFR69711.1| 30S ribosomal protein S13 [Brachyspira pilosicoli B2904]
gi|430781907|gb|AGA67191.1| 30S ribosomal protein S13 [Brachyspira pilosicoli P43/6/78]
Length = 129
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 33/142 (23%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M I +++ ALT I G GR ++++ KA+ID + +A + ++ ++ +
Sbjct: 5 MGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITAL-------- 56
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDL----ERLKKIRAHRGMRHYWG 116
+D ++ +T +++ LR +L +RLK I ++RGMRH
Sbjct: 57 ------------RDAIE---------ATTKVEGDLRTELFNNIKRLKDIHSYRGMRHIKR 95
Query: 117 LRVRGQHTKTTGRRGRTVGVSK 138
L VRGQ T+T R R G K
Sbjct: 96 LPVRGQRTRTNSRNARGGGARK 117
>gi|339499044|ref|YP_004697079.1| 30S ribosomal protein S13 [Spirochaeta caldaria DSM 7334]
gi|338833393|gb|AEJ18571.1| 30S ribosomal protein S13 [Spirochaeta caldaria DSM 7334]
Length = 121
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+ V ALT I G GR ++ + K ID N++ + S+EEV+++ ++ N +YK
Sbjct: 12 KHVNIALTYIYGIGRPSADEICAKTKIDPNRKMNDLSQEEVNELRQLIEN--EYK----- 64
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
V+G+ L +++ +++RL I +RG+RH GL VRGQ T+T
Sbjct: 65 -------VEGR-----------LRTEIALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNA 106
Query: 129 R 129
R
Sbjct: 107 R 107
>gi|406929966|gb|EKD65427.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 135
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 30/141 (21%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
NI +++ ALT + G GR +LKKAD++ +KR SE+E +I M YK
Sbjct: 7 NIPDDKRIDIALTYLYGIGRSNVFSILKKADVEGSKRVKTLSEDEQKRIQKAMEG---YK 63
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+ L S++ +++RLK+I ++RG+RH L RGQ
Sbjct: 64 VE-----------------------GDLRSEVISNIKRLKEIYSYRGLRHTKNLPARGQR 100
Query: 124 TKTTGR--RGR--TVGVSKKK 140
T++ R RG+ T+G KK+
Sbjct: 101 TRSNARTKRGKRVTIGAIKKE 121
>gi|157363467|ref|YP_001470234.1| 30S ribosomal protein S13 [Thermotoga lettingae TMO]
gi|166991604|sp|A8F4T6.1|RS13_THELT RecName: Full=30S ribosomal protein S13
gi|157314071|gb|ABV33170.1| ribosomal protein S13 [Thermotoga lettingae TMO]
Length = 128
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ + G +K ALT + G GR + +LK I+ +KR + ++EEV KI + +
Sbjct: 5 VGVELPGNKKCFVALTYLYGVGRTRAFEILKNTGINPDKRVKDLTDEEVSKITKFIQD-- 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YK+ +L + + +++RL I +RG RH GL VR
Sbjct: 63 HYKV-----------------------EGELRTDINRNIKRLIDIGCYRGFRHKLGLPVR 99
Query: 121 GQHTKTTGR 129
GQ T++ R
Sbjct: 100 GQRTRSNAR 108
>gi|317123072|ref|YP_004103075.1| 30S ribosomal protein S13 [Thermaerobacter marianensis DSM 12885]
gi|410582544|ref|ZP_11319650.1| 30S ribosomal protein S13 [Thermaerobacter subterraneus DSM 13965]
gi|315593052|gb|ADU52348.1| SSU ribosomal protein S13P [Thermaerobacter marianensis DSM 12885]
gi|410505364|gb|EKP94873.1| 30S ribosomal protein S13 [Thermaerobacter subterraneus DSM 13965]
Length = 126
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V +AL I G G S +L KA ++ + R + +E+E++++ I+ R YK+
Sbjct: 13 KRVEYALPYIYGIGLSRSREILAKAQVNPDTRVRDLTEDEINRLRAIIE--RDYKV---- 66
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+L S+++ +++RL I +RG+RH GL VRGQ TKT
Sbjct: 67 -------------------EGELRSEVQRNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|304315966|ref|YP_003851111.1| 30S ribosomal protein S13 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|333896214|ref|YP_004470088.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum
LX-11]
gi|302777468|gb|ADL68027.1| 30S ribosomal protein S13 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|333111479|gb|AEF16416.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 122
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +L KA ++ + R + +E+EV
Sbjct: 12 EKRVEIGLTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEDEV------------------ 53
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+R +DI+D +Y L ++ +++RL I +RG+RH GL VRGQ T+T
Sbjct: 54 --SRLRDIIDKEYK-----VEGDLRREVSLNIKRLIDIGCYRGIRHRKGLPVRGQRTRTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|160881760|ref|YP_001560728.1| 30S ribosomal protein S13 [Clostridium phytofermentans ISDg]
gi|189040498|sp|A9KJG9.1|RS13_CLOPH RecName: Full=30S ribosomal protein S13
gi|160430426|gb|ABX43989.1| ribosomal protein S13 [Clostridium phytofermentans ISDg]
Length = 122
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
++++ LT + G GR SN +L KA ++ + R + ++EEV KI
Sbjct: 12 EKRIEIGLTYVYGIGRVSSNRILAKAGVNPDTRVRDLTDEEVAKI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+D++D + +L L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 57 -----RDVID----ETMLVE-GDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|206900392|ref|YP_002250725.1| 30S ribosomal protein S13 [Dictyoglomus thermophilum H-6-12]
gi|226712733|sp|B5YDW7.1|RS13_DICT6 RecName: Full=30S ribosomal protein S13
gi|206739495|gb|ACI18553.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12]
Length = 124
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 29/142 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ +K+ ALT I G GR S +L+ +D NKR + +EEE+ K+ + N Y
Sbjct: 7 VDLPSNKKIEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEIEN--NY 64
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+ L ++ ++ RL +I +RG+RH GL VRGQ
Sbjct: 65 KV-----------------------EGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQ 101
Query: 123 HTKTTG--RRG--RTVGVSKKK 140
T+ R+G +TVG +K+
Sbjct: 102 RTRCNARTRKGPRKTVGAKRKE 123
>gi|311748490|ref|ZP_07722275.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1]
gi|126577007|gb|EAZ81255.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1]
Length = 125
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
LT I G GR + +L KA I +K+AGE ++E I I+
Sbjct: 17 IGLTYIFGIGRSSAKAILSKAGISFDKKAGEWDDDESTAIRNIIAEE------------- 63
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG--RR 130
+ L S+++ +++RL I +RG+RH GL VRGQHTK R+
Sbjct: 64 ------------FRTEGVLKSEIQLNIKRLMDIGCYRGLRHRKGLPVRGQHTKNNARTRK 111
Query: 131 GRTVGVSKKK 140
G+ V+ KK
Sbjct: 112 GKRKTVANKK 121
>gi|34558007|ref|NP_907822.1| 30S ribosomal protein S13 [Wolinella succinogenes DSM 1740]
gi|81653421|sp|Q7M8F4.1|RS13_WOLSU RecName: Full=30S ribosomal protein S13
gi|34483725|emb|CAE10722.1| 30S RIBOSOMAL PROTEIN S13 [Wolinella succinogenes]
Length = 122
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K+++ +ALT I G G + S +L +I L+KR E SE+EV I
Sbjct: 7 VDLPKKKRIEYALTYIYGIGLKTSRDILSAVNISLDKRVQELSEDEVSLI--------SK 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI + + V+G L K+ D++ L + ++RG+RH GL VRGQ
Sbjct: 59 KIQESY------AVEG-----------DLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVGVSKK 139
TK R + +TVG + K
Sbjct: 102 TTKNNARTRKGKRKTVGSASK 122
>gi|386748842|ref|YP_006222049.1| 30S ribosomal protein S13 [Helicobacter cetorum MIT 00-7128]
gi|384555085|gb|AFI03419.1| 30S ribosomal protein S13 [Helicobacter cetorum MIT 00-7128]
Length = 120
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ + +KR E SE+EV I
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKSSREILEAVGVSFDKRVHELSEDEVSSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L V+G L K++ D++ L + ++RG+RH GL VRGQ
Sbjct: 59 KIQQSYL------VEG-----------DLRKKVQMDIKSLMDLGSYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|302388737|ref|YP_003824558.1| 30S ribosomal protein S13 [Thermosediminibacter oceani DSM 16646]
gi|302199365|gb|ADL06935.1| SSU ribosomal protein S13P [Thermosediminibacter oceani DSM 16646]
Length = 123
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G GR SN +LK+A ++ + R + +E E+ +
Sbjct: 13 KRVEIALTYIYGIGRSLSNKILKEAGVNPDTRVKDLTEREISNL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+DI++ Y L ++ +++RL +I +RG+RH GL VRGQ T+T
Sbjct: 57 ----RDIIEKNYK-----VEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTRTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|406917495|gb|EKD56269.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 128
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 29/139 (20%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M NI ++++ +LT I G G + ++ ++ ID N+R + E+DK+ ++
Sbjct: 5 MGLNIPDNKRIVISLTYIYGIGNSSAQKIIAQSGIDPNRRTNSLTNPELDKLREVI---- 60
Query: 61 QYKIPDWFLNRQKDI-VDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+K++ V+G ++ ++++RLK+I ++RG+RH L
Sbjct: 61 -----------EKNLKVEGDLRMLV-----------NQNVKRLKEINSYRGVRHLKKLPA 98
Query: 120 RGQHTKTTGR--RGRTVGV 136
RGQ TKT R RG+ V V
Sbjct: 99 RGQRTKTNARTKRGKKVCV 117
>gi|162139378|ref|YP_914590.2| 30S ribosomal protein S13 [Paracoccus denitrificans PD1222]
gi|158706363|sp|A1B050.2|RS13_PARDP RecName: Full=30S ribosomal protein S13
Length = 122
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 25/127 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
NI ++V ALT I G G +F++ ++ I+ +R E S+ EV +I R+Y
Sbjct: 7 VNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQI-------REY 59
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+D LT L + + +++RL + ++RG+RH GL VRGQ
Sbjct: 60 -------------IDAN-----LTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQ 101
Query: 123 HTKTTGR 129
T T R
Sbjct: 102 RTHTNAR 108
>gi|340028930|ref|ZP_08664993.1| 30S ribosomal protein S13 [Paracoccus sp. TRP]
Length = 128
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 25/128 (19%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
NI ++V ALT I G G +F+ +++ ID +R + S+ EV +I R+
Sbjct: 12 GVNIPTGKRVPIALTYIHGIGPKFAEQIIQAVGIDPARRVNDLSDAEVLQI-------RE 64
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
Y +D LT L + + +++RL + ++RG+RH GL VRG
Sbjct: 65 Y-------------IDAN-----LTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRG 106
Query: 122 QHTKTTGR 129
Q T T R
Sbjct: 107 QRTHTNAR 114
>gi|333029359|ref|ZP_08457420.1| 30S ribosomal protein S13 [Bacteroides coprosuis DSM 18011]
gi|332739956|gb|EGJ70438.1| 30S ribosomal protein S13 [Bacteroides coprosuis DSM 18011]
Length = 126
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 27/130 (20%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
ALT I G GR +N +L+KA ID N + E ++++ KI
Sbjct: 18 IALTYIYGIGRSNANKILEKAGIDRNLKVNEWTDDQAAKI-------------------- 57
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG--RR 130
++I+ ++ L S+++ +++RL I +RG+RH GL VRGQ TK R+
Sbjct: 58 REIIGAEFK-----VEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112
Query: 131 GRTVGVSKKK 140
GR V+ KK
Sbjct: 113 GRKKTVANKK 122
>gi|365121809|ref|ZP_09338723.1| 30S ribosomal protein S13 [Tannerella sp. 6_1_58FAA_CT1]
gi|363644410|gb|EHL83697.1| 30S ribosomal protein S13 [Tannerella sp. 6_1_58FAA_CT1]
Length = 126
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 27/130 (20%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
ALT I G GR SN +L KA ID + + + ++E+ K+ I+ +YK+
Sbjct: 18 IALTYIYGIGRSASNTILSKAGIDKDIKVKDWTDEQAAKVREIIGT--EYKVE------- 68
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG--RR 130
L S+++ +++RL I +RG+RH GL VRGQ TK R+
Sbjct: 69 ----------------GDLRSEVQLNIKRLMDIGCYRGIRHRNGLPVRGQSTKNNARTRK 112
Query: 131 GRTVGVSKKK 140
GR V+ KK
Sbjct: 113 GRKKTVANKK 122
>gi|169335654|ref|ZP_02862847.1| hypothetical protein ANASTE_02074 [Anaerofustis stercorihominis DSM
17244]
gi|169258392|gb|EDS72358.1| 30S ribosomal protein S13 [Anaerofustis stercorihominis DSM 17244]
Length = 122
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G G+ SN +L +A I+ + R + SEEEV+K+
Sbjct: 13 KRVEIGLTYIYGIGQATSNKLLAEAGINPDTRIKDLSEEEVNKL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+ ++D K +T L ++ +++RL +I +RG+RH GL VRGQ +KT
Sbjct: 57 ----RSLIDEK-----VTVEGDLRREVSLNIKRLMEIGTYRGLRHRRGLPVRGQKSKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|225376435|ref|ZP_03753656.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM
16841]
gi|225211811|gb|EEG94165.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM
16841]
Length = 128
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR ++ +L +A++D N R + +++EV +I ++ N +
Sbjct: 18 EKRVEIGLTYIYGIGRVSADRILAEANVDPNTRCRDLTDDEVKRISEVIDNTQ------- 70
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
T L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 71 ------------------TVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTN 112
Query: 128 GR 129
R
Sbjct: 113 AR 114
>gi|307244743|ref|ZP_07526844.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678]
gi|306491841|gb|EFM63893.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678]
Length = 122
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 27/135 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++ LT I G GR SN +L KA I+ + R E SE++V+++ I+
Sbjct: 12 EKRAEIGLTYIYGIGRATSNEILAKAGINPDTRIKELSEDQVNELRRIID---------- 61
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+ +V+G L ++ +++RL+ I+ +RG+RH GL +RGQ TKT
Sbjct: 62 ----EDHLVEG-----------DLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQKTKTN 106
Query: 128 G--RRGRTVGVSKKK 140
R+G VS+KK
Sbjct: 107 ARTRKGPRKTVSRKK 121
>gi|193214823|ref|YP_001996022.1| 30S ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110]
gi|226712715|sp|B3QYE7.1|RS13_CHLT3 RecName: Full=30S ribosomal protein S13
gi|193088300|gb|ACF13575.1| ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110]
Length = 125
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 25/119 (21%)
Query: 11 VMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLN 70
V+ LT + G GR + +L KA + +K+ E +++E ++I TI+TN +YK+
Sbjct: 14 VVIGLTYVYGIGRTTAKKILAKAGVPEDKKVSEVTDDEANEIRTIVTN--EYKV------ 65
Query: 71 RQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
Q S+ + ++RL I +RG+RH GL RGQ T+T R
Sbjct: 66 -----------------EGQARSEQQLAIKRLMDIGCYRGLRHRRGLPARGQRTRTNAR 107
>gi|420409337|ref|ZP_14908488.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4216]
gi|420422563|ref|ZP_14921640.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4110]
gi|393022092|gb|EJB23221.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4216]
gi|393036497|gb|EJB37536.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4110]
Length = 120
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ I +KR E SE+EV I
Sbjct: 7 VDLPKKKRVEYALTYIYGVGLKSSREILEAVGISFDKRVHELSEDEVSSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L V+G L K++ D++ L + +RG+RH GL VRGQ
Sbjct: 59 KIQQSYL------VEG-----------DLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|390442917|ref|ZP_10230716.1| 30S ribosomal protein S13 [Nitritalea halalkaliphila LW7]
gi|389667225|gb|EIM78648.1| 30S ribosomal protein S13 [Nitritalea halalkaliphila LW7]
Length = 125
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
LT I G GR + +L KA I +K+AGE +EE I TI+
Sbjct: 17 IGLTYIFGIGRSSAKAILSKAGISYDKKAGEWDDEESTAIRTIIAEE------------- 63
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG--RR 130
+ L S+++ +++RL I +RG+RH GL VRGQ TK R+
Sbjct: 64 ------------FRTEGALKSEIQLNIKRLMDIGCYRGLRHRKGLPVRGQKTKNNARTRK 111
Query: 131 GRTVGVSKKK 140
G+ V+ KK
Sbjct: 112 GKRKTVANKK 121
>gi|390934147|ref|YP_006391652.1| 30S ribosomal protein S13 [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569648|gb|AFK86053.1| 30S ribosomal protein S13 [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 122
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +L KA ++ + R + +E+E+
Sbjct: 12 EKRVEIGLTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEDEI------------------ 53
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+R +DI+D +Y L ++ +++RL I +RG+RH GL VRGQ T+T
Sbjct: 54 --SRLRDIIDKEYK-----VEGDLRREVSLNIKRLIDIGCYRGIRHRKGLPVRGQRTRTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|218135256|ref|ZP_03464060.1| hypothetical protein BACPEC_03161 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990641|gb|EEC56652.1| 30S ribosomal protein S13 [[Bacteroides] pectinophilus ATCC 43243]
Length = 123
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 24/122 (19%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +L +A ++ + R + ++EEV KI ++ N
Sbjct: 12 EKRVEIGLTYIYGIGRVTSNRILAEAQVNPDTRVRDLTDEEVAKIRDVIEN--------- 62
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
IL+ + D + +++RLK+I +RG+RH GL RGQ TKT
Sbjct: 63 -------------DNILVEGDLRRDIAM--NIKRLKEIGCYRGIRHRKGLPCRGQKTKTN 107
Query: 128 GR 129
R
Sbjct: 108 AR 109
>gi|397905079|ref|ZP_10505951.1| SSU ribosomal protein S13p (S18e) [Caloramator australicus RC3]
gi|397161874|emb|CCJ33285.1| SSU ribosomal protein S13p (S18e) [Caloramator australicus RC3]
Length = 125
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 29/136 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
++++ ALT I G GR +N +L++ I+ + R + +EEEV K+ R+Y
Sbjct: 12 EKRIEIALTYIYGIGRPSANKILQETGINPDTRVKDLTEEEVAKL-------REY----- 59
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+D + T L ++ +++RL +I +RG+RH GL VRGQ T+T
Sbjct: 60 --------IDKNF-----TVEGDLRREIALNIKRLMEIGCYRGLRHRRGLPVRGQRTRTN 106
Query: 128 G--RRG--RTVGVSKK 139
R+G RT+G KK
Sbjct: 107 ARTRKGPRRTIGGKKK 122
>gi|291521875|emb|CBK80168.1| 30S ribosomal protein S13 [Coprococcus catus GD/7]
Length = 123
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 24/121 (19%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+++ LT + G GR SN +LK+A ++ + R + ++EEV KI
Sbjct: 13 KRIEIGLTYVYGIGRATSNRLLKEAGVNPDTRVRDLTDEEVGKI---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+D +D IL+ L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 57 ----RDAIDA--DSILIE--GDLRREIAINIKRLQEIGCYRGIRHRKGLPVRGQKTKTNA 108
Query: 129 R 129
R
Sbjct: 109 R 109
>gi|119373301|gb|ABL68894.1| SSU ribosomal protein S13P [Paracoccus denitrificans PD1222]
Length = 128
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 25/127 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
NI ++V ALT I G G +F++ ++ I+ +R E S+ EV +I R+Y
Sbjct: 13 VNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQI-------REY 65
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+D LT L + + +++RL + ++RG+RH GL VRGQ
Sbjct: 66 -------------IDAN-----LTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQ 107
Query: 123 HTKTTGR 129
T T R
Sbjct: 108 RTHTNAR 114
>gi|347534759|ref|YP_004841429.1| 30S ribosomal protein S13 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504815|gb|AEN99497.1| 30S ribosomal protein S13 [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 116
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 26/121 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V+ ALT I G G S VL++A + + R + + ++ DKI + N F
Sbjct: 13 KRVIIALTYIYGVGEATSKKVLEQAGVSEDVRTQDLTPDQQDKIREALDN---------F 63
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+++G L K+ D++RL +I ++RGMRH GL +RGQHTK
Sbjct: 64 ------VIEG-----------DLRRKVSMDIKRLSEIGSYRGMRHRRGLPLRGQHTKNNA 106
Query: 129 R 129
R
Sbjct: 107 R 107
>gi|325663037|ref|ZP_08151487.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086644|ref|ZP_08335721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470491|gb|EGC73721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409810|gb|EGG89245.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 122
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR SN +L++A ++ + R + ++EEV KI ++
Sbjct: 13 KRVEIGLTYIYGIGRVSSNRILEEAGVNPDTRVRDLTDEEVKKISAVID----------- 61
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+ +V+G L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 62 ---ETQLVEG-----------DLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|289449373|ref|YP_003475758.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289183920|gb|ADC90345.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 122
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 25/127 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ ++++ ALT I G GR S ++ K ++ + R + S++E+ KI ++ N QY
Sbjct: 7 VDLPNEKRLEIALTYIYGIGRTLSGEIIAKCGLNPDTRVKDLSDDEIAKIRDVLEN--QY 64
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+ L ++ +++RL +I +RG RH GL VRGQ
Sbjct: 65 KV-----------------------EGDLRREVALNIKRLTEIGCYRGRRHRMGLPVRGQ 101
Query: 123 HTKTTGR 129
TKT R
Sbjct: 102 RTKTNAR 108
>gi|15645909|ref|NP_208088.1| 30S ribosomal protein S13 [Helicobacter pylori 26695]
gi|108563666|ref|YP_627982.1| 30S ribosomal protein S13 [Helicobacter pylori HPAG1]
gi|188528084|ref|YP_001910771.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470]
gi|207108654|ref|ZP_03242816.1| 30S ribosomal protein S13 [Helicobacter pylori HPKX_438_CA4C1]
gi|208435194|ref|YP_002266860.1| 30S ribosomal protein S13 [Helicobacter pylori G27]
gi|210135455|ref|YP_002301894.1| 30S ribosomal protein S13 [Helicobacter pylori P12]
gi|217032050|ref|ZP_03437550.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128]
gi|217033615|ref|ZP_03439043.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10]
gi|298735679|ref|YP_003728204.1| 30S ribosomal protein S13 [Helicobacter pylori B8]
gi|308183406|ref|YP_003927533.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4]
gi|308185048|ref|YP_003929181.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180]
gi|383750340|ref|YP_005425443.1| 30S ribosomal protein S13 [Helicobacter pylori ELS37]
gi|384888181|ref|YP_005762692.1| hypothetical protein HPKB_1229 [Helicobacter pylori 52]
gi|384889912|ref|YP_005764214.1| 30S ribosomal protein S13 [Helicobacter pylori v225d]
gi|384893284|ref|YP_005767377.1| 30S ribosomal protein S13 [Helicobacter pylori Cuz20]
gi|384894819|ref|YP_005768868.1| 30S ribosomal protein S13 [Helicobacter pylori Sat464]
gi|385216489|ref|YP_005776446.1| 30S ribosomal protein S13 [Helicobacter pylori F32]
gi|385217986|ref|YP_005779462.1| 30S ribosomal protein S13 [Helicobacter pylori F16]
gi|385219529|ref|YP_005781004.1| 30S ribosomal protein S13 [Helicobacter pylori Gambia94/24]
gi|385221172|ref|YP_005782644.1| 30S ribosomal protein S13 [Helicobacter pylori India7]
gi|385222717|ref|YP_005771850.1| 30S ribosomal protein S13 [Helicobacter pylori SouthAfrica7]
gi|385225950|ref|YP_005785875.1| 30S ribosomal protein S13 [Helicobacter pylori 83]
gi|385227488|ref|YP_005787412.1| 30S ribosomal protein S13 [Helicobacter pylori SNT49]
gi|385228982|ref|YP_005788915.1| 30S ribosomal protein S13 [Helicobacter pylori Puno120]
gi|385230594|ref|YP_005790510.1| 30S ribosomal protein S13 [Helicobacter pylori Puno135]
gi|386746718|ref|YP_006219935.1| 30S ribosomal protein S13 [Helicobacter pylori HUP-B14]
gi|386751667|ref|YP_006224887.1| 30S ribosomal protein S13 [Helicobacter pylori Shi417]
gi|386753224|ref|YP_006226443.1| 30S ribosomal protein S13 [Helicobacter pylori Shi169]
gi|386754762|ref|YP_006227980.1| 30S ribosomal protein S13 [Helicobacter pylori Shi112]
gi|386756300|ref|YP_006229517.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan18]
gi|387782856|ref|YP_005793569.1| 30S ribosomal protein S13 [Helicobacter pylori 51]
gi|387908541|ref|YP_006338875.1| 30S ribosomal protein S13 [Helicobacter pylori XZ274]
gi|410024530|ref|YP_006893783.1| 30S ribosomal protein S13 [Helicobacter pylori Rif1]
gi|410502297|ref|YP_006936824.1| 30S ribosomal protein S13 [Helicobacter pylori Rif2]
gi|410682815|ref|YP_006935217.1| 30S ribosomal protein S13 [Helicobacter pylori 26695]
gi|419416545|ref|ZP_13957088.1| 30S ribosomal protein S13 [Helicobacter pylori P79]
gi|420397534|ref|ZP_14896751.1| 30S ribosomal protein S13 [Helicobacter pylori CPY1313]
gi|420399368|ref|ZP_14898575.1| 30S ribosomal protein S13 [Helicobacter pylori CPY1962]
gi|420400814|ref|ZP_14900013.1| 30S ribosomal protein S13 [Helicobacter pylori CPY3281]
gi|420402388|ref|ZP_14901577.1| 30S ribosomal protein S13 [Helicobacter pylori CPY6081]
gi|420404106|ref|ZP_14903291.1| 30S ribosomal protein S13 [Helicobacter pylori CPY6261]
gi|420405643|ref|ZP_14904817.1| 30S ribosomal protein S13 [Helicobacter pylori CPY6271]
gi|420407455|ref|ZP_14906620.1| 30S ribosomal protein S13 [Helicobacter pylori CPY6311]
gi|420410673|ref|ZP_14909812.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4200]
gi|420412674|ref|ZP_14911801.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4228]
gi|420414243|ref|ZP_14913364.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4099]
gi|420417614|ref|ZP_14916711.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4044]
gi|420419104|ref|ZP_14918195.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4076]
gi|420420987|ref|ZP_14920071.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4161]
gi|420425803|ref|ZP_14924863.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-5]
gi|420427595|ref|ZP_14926638.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-9]
gi|420429340|ref|ZP_14928373.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-17]
gi|420431034|ref|ZP_14930059.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-20]
gi|420432728|ref|ZP_14931741.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-16]
gi|420434558|ref|ZP_14933560.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-24]
gi|420435344|ref|ZP_14934344.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-27]
gi|420441014|ref|ZP_14939965.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-30]
gi|420442702|ref|ZP_14941635.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-36]
gi|420444324|ref|ZP_14943248.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-41]
gi|420446027|ref|ZP_14944930.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-42]
gi|420446579|ref|ZP_14945476.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-43]
gi|420449373|ref|ZP_14948244.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-44]
gi|420450824|ref|ZP_14949679.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-45]
gi|420452675|ref|ZP_14951518.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-6]
gi|420454060|ref|ZP_14952894.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-8]
gi|420455827|ref|ZP_14954653.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-14]
gi|420457632|ref|ZP_14956446.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-16]
gi|420459463|ref|ZP_14958265.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-26]
gi|420460789|ref|ZP_14959586.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-27]
gi|420462649|ref|ZP_14961430.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-3]
gi|420464337|ref|ZP_14963111.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-4]
gi|420469410|ref|ZP_14968132.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-10]
gi|420471217|ref|ZP_14969920.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-11]
gi|420472947|ref|ZP_14971631.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-18]
gi|420474731|ref|ZP_14973405.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-19]
gi|420476174|ref|ZP_14974841.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-21]
gi|420477999|ref|ZP_14976654.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-23]
gi|420479707|ref|ZP_14978353.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-34]
gi|420481367|ref|ZP_14980006.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-1]
gi|420482915|ref|ZP_14981549.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-2]
gi|420484606|ref|ZP_14983229.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-3]
gi|420486389|ref|ZP_14985003.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-4]
gi|420487935|ref|ZP_14986538.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-8]
gi|420489761|ref|ZP_14988353.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-11]
gi|420491444|ref|ZP_14990024.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-13]
gi|420493202|ref|ZP_14991775.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-15]
gi|420494614|ref|ZP_14993182.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-16]
gi|420496580|ref|ZP_14995143.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-23]
gi|420498360|ref|ZP_14996919.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-25]
gi|420499420|ref|ZP_14997976.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-26]
gi|420500857|ref|ZP_14999402.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-30]
gi|420503321|ref|ZP_15001855.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-41]
gi|420504880|ref|ZP_15003404.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-62]
gi|420505683|ref|ZP_15004199.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-74]
gi|420508286|ref|ZP_15006792.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-24b]
gi|420509921|ref|ZP_15008419.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-24c]
gi|420511810|ref|ZP_15010295.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-1b]
gi|420513381|ref|ZP_15011859.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-2b]
gi|420514958|ref|ZP_15013427.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-3b]
gi|420516899|ref|ZP_15015357.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-4c]
gi|420518599|ref|ZP_15017048.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-4d]
gi|420520153|ref|ZP_15018591.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-5b]
gi|420521812|ref|ZP_15020241.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-8b]
gi|420523693|ref|ZP_15022111.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-11b]
gi|420525230|ref|ZP_15023635.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-13b]
gi|420526103|ref|ZP_15024504.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-15b]
gi|420528594|ref|ZP_15026985.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-25c]
gi|420529370|ref|ZP_15027758.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-25d]
gi|420531830|ref|ZP_15030201.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-28b]
gi|420533705|ref|ZP_15032063.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M1]
gi|420535268|ref|ZP_15033613.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M2]
gi|420537081|ref|ZP_15035416.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M3]
gi|420538827|ref|ZP_15037150.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M4]
gi|420540465|ref|ZP_15038781.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M5]
gi|420542187|ref|ZP_15040493.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M6]
gi|420543692|ref|ZP_15041982.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M9]
gi|421710768|ref|ZP_16150118.1| 30S ribosomal protein S13 [Helicobacter pylori R018c]
gi|421712360|ref|ZP_16151694.1| 30S ribosomal protein S13 [Helicobacter pylori R030b]
gi|421714080|ref|ZP_16153404.1| 30S ribosomal protein S13 [Helicobacter pylori R32b]
gi|421715505|ref|ZP_16154822.1| 30S ribosomal protein S13 [Helicobacter pylori R036d]
gi|421717388|ref|ZP_16156693.1| 30S ribosomal protein S13 [Helicobacter pylori R037c]
gi|421720328|ref|ZP_16159611.1| 30S ribosomal protein S13 [Helicobacter pylori R046Wa]
gi|421722233|ref|ZP_16161500.1| 30S ribosomal protein S13 [Helicobacter pylori R055a]
gi|421724004|ref|ZP_16163253.1| 30S ribosomal protein S13 [Helicobacter pylori R056a]
gi|425433412|ref|ZP_18813947.1| 30S ribosomal protein S13 [Helicobacter pylori GAM100Ai]
gi|425789833|ref|YP_007017753.1| 30S ribosomal protein S13 [Helicobacter pylori Aklavik117]
gi|425790372|ref|YP_007018289.1| 30S ribosomal protein S13 [Helicobacter pylori Aklavik86]
gi|444374912|ref|ZP_21174214.1| 30S ribosomal protein S13 [Helicobacter pylori A45]
gi|2500456|sp|P56020.1|RS13_HELPY RecName: Full=30S ribosomal protein S13
gi|123373689|sp|Q1CRW4.1|RS13_HELPH RecName: Full=30S ribosomal protein S13
gi|226712744|sp|B6JND6.1|RS13_HELP2 RecName: Full=30S ribosomal protein S13
gi|226712745|sp|B5Z8U5.1|RS13_HELPG RecName: Full=30S ribosomal protein S13
gi|226712746|sp|B2UV59.1|RS13_HELPS RecName: Full=30S ribosomal protein S13
gi|2314462|gb|AAD08339.1| ribosomal protein S13 (rps13) [Helicobacter pylori 26695]
gi|107837439|gb|ABF85308.1| ribosomal protein S13 [Helicobacter pylori HPAG1]
gi|188144324|gb|ACD48741.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470]
gi|208433123|gb|ACI27994.1| ribosomal protein S13 [Helicobacter pylori G27]
gi|210133423|gb|ACJ08414.1| 30S ribosomal protein S13 [Helicobacter pylori P12]
gi|216943961|gb|EEC23395.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10]
gi|216946198|gb|EEC24806.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128]
gi|261838615|gb|ACX98381.1| ribosomal protein S13 [Helicobacter pylori 51]
gi|261840011|gb|ACX99776.1| hypothetical protein HPKB_1229 [Helicobacter pylori 52]
gi|297380478|gb|ADI35365.1| 30S ribosomal protein S13 [Helicobacter pylori v225d]
gi|298354868|emb|CBI65740.1| small subunit ribosomal protein S13 [Helicobacter pylori B8]
gi|308060968|gb|ADO02864.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180]
gi|308062581|gb|ADO04469.1| 30S ribosomal protein S13 [Helicobacter pylori Cuz20]
gi|308064073|gb|ADO05960.1| 30S ribosomal protein S13 [Helicobacter pylori Sat464]
gi|308065591|gb|ADO07483.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4]
gi|317009979|gb|ADU80559.1| 30S ribosomal protein S13 [Helicobacter pylori India7]
gi|317011496|gb|ADU85243.1| 30S ribosomal protein S13 [Helicobacter pylori SouthAfrica7]
gi|317014687|gb|ADU82123.1| 30S ribosomal protein S13 [Helicobacter pylori Gambia94/24]
gi|317178035|dbj|BAJ55824.1| 30S ribosomal protein S13 [Helicobacter pylori F16]
gi|317181018|dbj|BAJ58804.1| 30S ribosomal protein S13 [Helicobacter pylori F32]
gi|332674096|gb|AEE70913.1| 30S ribosomal protein S13 [Helicobacter pylori 83]
gi|344332401|gb|AEN17431.1| 30S ribosomal protein S13 [Helicobacter pylori SNT49]
gi|344335420|gb|AEN15864.1| 30S ribosomal protein S13 [Helicobacter pylori Puno120]
gi|344337032|gb|AEN18993.1| 30S ribosomal protein S13 [Helicobacter pylori Puno135]
gi|380875086|gb|AFF20867.1| 30S ribosomal protein S13 [Helicobacter pylori ELS37]
gi|384375051|gb|EIE30386.1| 30S ribosomal protein S13 [Helicobacter pylori P79]
gi|384552967|gb|AFI07915.1| 30S ribosomal protein S13 [Helicobacter pylori HUP-B14]
gi|384557925|gb|AFH98393.1| 30S ribosomal protein S13 [Helicobacter pylori Shi417]
gi|384559482|gb|AFH99949.1| 30S ribosomal protein S13 [Helicobacter pylori Shi169]
gi|384561020|gb|AFI01487.1| 30S ribosomal protein S13 [Helicobacter pylori Shi112]
gi|384562558|gb|AFI03024.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan18]
gi|387573476|gb|AFJ82184.1| 30S ribosomal protein S13 [Helicobacter pylori XZ274]
gi|393011559|gb|EJB12746.1| 30S ribosomal protein S13 [Helicobacter pylori CPY1962]
gi|393011953|gb|EJB13138.1| 30S ribosomal protein S13 [Helicobacter pylori CPY1313]
gi|393016422|gb|EJB17581.1| 30S ribosomal protein S13 [Helicobacter pylori CPY3281]
gi|393016785|gb|EJB17942.1| 30S ribosomal protein S13 [Helicobacter pylori CPY6081]
gi|393018978|gb|EJB20124.1| 30S ribosomal protein S13 [Helicobacter pylori CPY6261]
gi|393021463|gb|EJB22594.1| 30S ribosomal protein S13 [Helicobacter pylori CPY6311]
gi|393022318|gb|EJB23443.1| 30S ribosomal protein S13 [Helicobacter pylori CPY6271]
gi|393026492|gb|EJB27591.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4228]
gi|393026909|gb|EJB28003.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4200]
gi|393027194|gb|EJB28287.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4099]
gi|393032194|gb|EJB33263.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4076]
gi|393032416|gb|EJB33483.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4044]
gi|393035786|gb|EJB36830.1| 30S ribosomal protein S13 [Helicobacter pylori NQ4161]
gi|393040701|gb|EJB41719.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-5]
gi|393041093|gb|EJB42110.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-9]
gi|393044670|gb|EJB45662.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-17]
gi|393045360|gb|EJB46345.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-20]
gi|393046818|gb|EJB47797.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-16]
gi|393048078|gb|EJB49046.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-24]
gi|393053112|gb|EJB54058.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-27]
gi|393055134|gb|EJB56057.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-30]
gi|393057277|gb|EJB58180.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-36]
gi|393059203|gb|EJB60086.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-41]
gi|393060196|gb|EJB61069.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-42]
gi|393062676|gb|EJB63525.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-44]
gi|393065451|gb|EJB66280.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-43]
gi|393066159|gb|EJB66985.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-45]
gi|393067237|gb|EJB68050.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-6]
gi|393068533|gb|EJB69335.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-8]
gi|393071465|gb|EJB72249.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-14]
gi|393072153|gb|EJB72933.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-26]
gi|393072868|gb|EJB73643.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-16]
gi|393074946|gb|EJB75702.1| 30S ribosomal protein S13 [Helicobacter pylori Hp A-27]
gi|393078050|gb|EJB78794.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-3]
gi|393078411|gb|EJB79153.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-4]
gi|393083759|gb|EJB84458.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-11]
gi|393084377|gb|EJB85070.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-10]
gi|393087420|gb|EJB88082.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-18]
gi|393088469|gb|EJB89116.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-19]
gi|393090081|gb|EJB90715.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-21]
gi|393092678|gb|EJB93299.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-23]
gi|393094090|gb|EJB94702.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-34]
gi|393094375|gb|EJB94984.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-1]
gi|393097519|gb|EJB98112.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-2]
gi|393099933|gb|EJC00513.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-3]
gi|393100314|gb|EJC00891.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-4]
gi|393101325|gb|EJC01897.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-8]
gi|393105182|gb|EJC05733.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-11]
gi|393105484|gb|EJC06033.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-13]
gi|393105796|gb|EJC06343.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-15]
gi|393110294|gb|EJC10820.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-16]
gi|393110638|gb|EJC11163.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-23]
gi|393111599|gb|EJC12121.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-25]
gi|393115078|gb|EJC15589.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-24b]
gi|393117215|gb|EJC17719.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-74]
gi|393118156|gb|EJC18654.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-24c]
gi|393118481|gb|EJC18978.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-1b]
gi|393121024|gb|EJC21508.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-4d]
gi|393121622|gb|EJC22104.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-4c]
gi|393125435|gb|EJC25895.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-5b]
gi|393126042|gb|EJC26494.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-11b]
gi|393126382|gb|EJC26833.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-8b]
gi|393130036|gb|EJC30466.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-13b]
gi|393131408|gb|EJC31831.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-15b]
gi|393132948|gb|EJC33366.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-25c]
gi|393135680|gb|EJC36075.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-28b]
gi|393136712|gb|EJC37102.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M1]
gi|393138484|gb|EJC38866.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-25d]
gi|393139553|gb|EJC39927.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M2]
gi|393141058|gb|EJC41424.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M3]
gi|393141941|gb|EJC42297.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M4]
gi|393144715|gb|EJC45047.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M5]
gi|393145909|gb|EJC46239.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M6]
gi|393149417|gb|EJC49727.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-41]
gi|393151239|gb|EJC51543.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-30]
gi|393151622|gb|EJC51925.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-26]
gi|393154026|gb|EJC54311.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-62]
gi|393155798|gb|EJC56069.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-2b]
gi|393156288|gb|EJC56556.1| 30S ribosomal protein S13 [Helicobacter pylori Hp P-3b]
gi|393159057|gb|EJC59312.1| 30S ribosomal protein S13 [Helicobacter pylori Hp M9]
gi|407209234|gb|EKE79137.1| 30S ribosomal protein S13 [Helicobacter pylori R018c]
gi|407209633|gb|EKE79521.1| 30S ribosomal protein S13 [Helicobacter pylori R030b]
gi|407213393|gb|EKE83250.1| 30S ribosomal protein S13 [Helicobacter pylori R32b]
gi|407215261|gb|EKE85101.1| 30S ribosomal protein S13 [Helicobacter pylori R036d]
gi|407218433|gb|EKE88258.1| 30S ribosomal protein S13 [Helicobacter pylori R037c]
gi|407220367|gb|EKE90175.1| 30S ribosomal protein S13 [Helicobacter pylori R046Wa]
gi|407223374|gb|EKE93164.1| 30S ribosomal protein S13 [Helicobacter pylori R055a]
gi|407223679|gb|EKE93464.1| 30S ribosomal protein S13 [Helicobacter pylori R056a]
gi|409894456|gb|AFV42514.1| 30S ribosomal protein S13 [Helicobacter pylori 26695]
gi|409896187|gb|AFV44109.1| 30S ribosomal protein S13 [Helicobacter pylori Rif1]
gi|409897848|gb|AFV45702.1| 30S ribosomal protein S13 [Helicobacter pylori Rif2]
gi|410713981|gb|EKQ71468.1| 30S ribosomal protein S13 [Helicobacter pylori GAM100Ai]
gi|425628148|gb|AFX91616.1| 30S ribosomal protein S13 [Helicobacter pylori Aklavik117]
gi|425628687|gb|AFX89227.1| 30S ribosomal protein S13 [Helicobacter pylori Aklavik86]
gi|443620568|gb|ELT81012.1| 30S ribosomal protein S13 [Helicobacter pylori A45]
Length = 120
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ I +KR E SE+EV I
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L V+G L K++ D++ L + +RG+RH GL VRGQ
Sbjct: 59 KIQQSYL------VEG-----------DLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|41469448|gb|AAS07249.1| putative 30S ribosomal protein S13 [Oryza sativa Japonica Group]
gi|108710647|gb|ABF98442.1| 30S ribosomal protein S13, putative, expressed [Oryza sativa
Japonica Group]
gi|164375541|gb|ABY52938.1| chloroplast 30S ribosomal protein S13 precursor [Oryza sativa
Japonica Group]
gi|222625639|gb|EEE59771.1| hypothetical protein OsJ_12269 [Oryza sativa Japonica Group]
Length = 171
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 63/140 (45%), Gaps = 29/140 (20%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
I ++V ++L I G GR S +L + D NK + SEEEV IT+ +Y
Sbjct: 52 VEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEV---ITLRKEVTKY 107
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
I L R +ERLK+IR +RG+RH GL VRGQ
Sbjct: 108 MI-----------------------EGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQ 144
Query: 123 HTKTTGR--RGRTVGVSKKK 140
TK R +GR V+KKK
Sbjct: 145 RTKNNCRTLKGRRASVAKKK 164
>gi|406025026|ref|YP_006705327.1| 30S ribosomal protein S13 [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
gi|404432625|emb|CCM09907.1| 30S ribosomal protein S13 [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
Length = 125
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 27/142 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I ++ ALT I G GR +N +L+ +D ++R +++E+ I T +
Sbjct: 5 LGVDIPDNKRGEIALTYIYGIGRSSANKILQAVQMDKDRRVSTWTDDELKAIRTAIRGV- 63
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
YKI L S++R +++RL +I+ +RG RH GL VR
Sbjct: 64 -YKIE-----------------------GDLKSEIRLNIKRLVEIKCYRGHRHQMGLPVR 99
Query: 121 GQHTKTTG--RRGRTVGVSKKK 140
GQ TKT R+G+ ++ KK
Sbjct: 100 GQRTKTNARTRKGKPKTIANKK 121
>gi|306821594|ref|ZP_07455192.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|402310823|ref|ZP_10829784.1| 30S ribosomal protein S13 [Eubacterium sp. AS15]
gi|304550339|gb|EFM38332.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|400367052|gb|EJP20071.1| 30S ribosomal protein S13 [Eubacterium sp. AS15]
Length = 122
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V+ LT I G G++ S +L ID + R + SEE+V+
Sbjct: 13 KRVIIGLTYIFGIGKQTSAKILATTGIDESIRIKDLSEEQVN-----------------L 55
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L ++ +D Y T L ++ +++RL+ IR +RG+RH GL VRGQ TKT
Sbjct: 56 LRKE---IDNNY-----TVEGDLKREISLNIKRLRDIRCYRGLRHMKGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|26554442|ref|NP_758376.1| 30S ribosomal protein S13 [Mycoplasma penetrans HF-2]
gi|32363326|sp|Q8EUD6.1|RS13_MYCPE RecName: Full=30S ribosomal protein S13
gi|26454452|dbj|BAC44780.1| ribosomal protein S13 [Mycoplasma penetrans HF-2]
Length = 124
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 26/129 (20%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ +I ++V+ +LT I G G+ S +L KA ID NK+ SEEE+ I I +
Sbjct: 5 LGVDIPNNKRVVISLTYIFGIGKSRSQEILSKAKIDENKKVSALSEEELATIRKIAS--- 61
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+Y +++G L ++ +++RL +I ++RG+RH L VR
Sbjct: 62 EY------------VIEG-----------DLRREVAMNIKRLMEIGSYRGIRHRRNLPVR 98
Query: 121 GQHTKTTGR 129
GQ TK R
Sbjct: 99 GQRTKCNAR 107
>gi|126697666|ref|YP_001086563.1| 30S ribosomal protein S13 [Clostridium difficile 630]
gi|254973757|ref|ZP_05270229.1| 30S ribosomal protein S13 [Clostridium difficile QCD-66c26]
gi|255091147|ref|ZP_05320625.1| 30S ribosomal protein S13 [Clostridium difficile CIP 107932]
gi|255099258|ref|ZP_05328235.1| 30S ribosomal protein S13 [Clostridium difficile QCD-63q42]
gi|255305041|ref|ZP_05349213.1| 30S ribosomal protein S13 [Clostridium difficile ATCC 43255]
gi|255312801|ref|ZP_05354384.1| 30S ribosomal protein S13 [Clostridium difficile QCD-76w55]
gi|255515560|ref|ZP_05383236.1| 30S ribosomal protein S13 [Clostridium difficile QCD-97b34]
gi|255648655|ref|ZP_05395557.1| 30S ribosomal protein S13 [Clostridium difficile QCD-37x79]
gi|255654188|ref|ZP_05399597.1| 30S ribosomal protein S13 [Clostridium difficile QCD-23m63]
gi|260681872|ref|YP_003213157.1| 30S ribosomal protein S13 [Clostridium difficile CD196]
gi|260685470|ref|YP_003216603.1| 30S ribosomal protein S13 [Clostridium difficile R20291]
gi|296449773|ref|ZP_06891542.1| 30S ribosomal protein S13 [Clostridium difficile NAP08]
gi|296877837|ref|ZP_06901859.1| 30S ribosomal protein S13 [Clostridium difficile NAP07]
gi|306518778|ref|ZP_07405125.1| 30S ribosomal protein S13 [Clostridium difficile QCD-32g58]
gi|384359425|ref|YP_006197277.1| 30S ribosomal protein S13 [Clostridium difficile BI1]
gi|423081682|ref|ZP_17070284.1| 30S ribosomal protein S13 [Clostridium difficile 002-P50-2011]
gi|423085164|ref|ZP_17073619.1| 30S ribosomal protein S13 [Clostridium difficile 050-P50-2011]
gi|423089479|ref|ZP_17077837.1| 30S ribosomal protein S13 [Clostridium difficile 70-100-2010]
gi|123174671|sp|Q18CI0.1|RS13_CLOD6 RecName: Full=30S ribosomal protein S13
gi|115249103|emb|CAJ66914.1| 30S ribosomal protein S13 [Clostridium difficile 630]
gi|260208035|emb|CBA60233.1| 30S ribosomal protein S13 [Clostridium difficile CD196]
gi|260211486|emb|CBE01623.1| 30S ribosomal protein S13 [Clostridium difficile R20291]
gi|296261371|gb|EFH08197.1| 30S ribosomal protein S13 [Clostridium difficile NAP08]
gi|296431137|gb|EFH16962.1| 30S ribosomal protein S13 [Clostridium difficile NAP07]
gi|357550260|gb|EHJ32085.1| 30S ribosomal protein S13 [Clostridium difficile 002-P50-2011]
gi|357550496|gb|EHJ32310.1| 30S ribosomal protein S13 [Clostridium difficile 050-P50-2011]
gi|357558089|gb|EHJ39596.1| 30S ribosomal protein S13 [Clostridium difficile 70-100-2010]
Length = 123
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 27/135 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++ LT I G G+ +N +L KA+I+ + R + SE++V+++ + I D
Sbjct: 12 EKRAEIGLTYIYGIGKATANEILAKAEINPDTRIKDLSEDQVNELRKV--------IDDD 63
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
FL V+G L ++ +++RL+ I+ +RG+RH GL +RGQ TKT
Sbjct: 64 FL------VEG-----------DLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQRTKTN 106
Query: 128 G--RRGRTVGVSKKK 140
R+G VS+KK
Sbjct: 107 ARTRKGPRKTVSRKK 121
>gi|385249747|ref|YP_005777966.1| 30S ribosomal protein S13 [Helicobacter pylori F57]
gi|317182542|dbj|BAJ60326.1| 30S ribosomal protein S13 [Helicobacter pylori F57]
Length = 120
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 25/127 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ I +KR E SE+EV I
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L V+G L K++ D++ L + +RG+RH GL VRGQ
Sbjct: 59 KIQQGYL------VEG-----------DLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR 129
TK R
Sbjct: 102 TTKNNAR 108
>gi|291277245|ref|YP_003517017.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198]
gi|290964439|emb|CBG40289.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198]
Length = 120
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 29/132 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
K++V +ALT I G G + S +L +I +KR + SE+EV I KI +
Sbjct: 12 KKRVEYALTHIYGIGLKISRDILNAVNISFDKRVHDLSEDEVSAIAK--------KIQES 63
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
++ V+G L K++ D++ L + +RG+RH GL VRGQ TK
Sbjct: 64 YM------VEG-----------DLRKKVQMDIKALMDLGNYRGLRHRKGLPVRGQTTKNN 106
Query: 128 GR----RGRTVG 135
R + +TVG
Sbjct: 107 ARTRKGKKKTVG 118
>gi|377809970|ref|YP_005005191.1| 30S ribosomal protein S13 [Pediococcus claussenii ATCC BAA-344]
gi|361056711|gb|AEV95515.1| 30S ribosomal protein S13 [Pediococcus claussenii ATCC BAA-344]
Length = 121
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 28/134 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++++ LT I G G + +LK AD+ + R + + ++ DKI + N R
Sbjct: 13 KRIVIGLTYIFGIGNTTAQKILKSADVSEDVRVRDLTADQEDKIRAEVDNYR-------- 64
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
V+G L + D++RL++I ++RGMRH GL VRGQHTK
Sbjct: 65 -------VEG-----------DLRRAVSLDIKRLQEIGSYRGMRHRRGLPVRGQHTKNNA 106
Query: 129 --RRGRTVGVSKKK 140
R+G+ V V+ +K
Sbjct: 107 RTRKGKKVTVAGRK 120
>gi|317131395|ref|YP_004090709.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3]
gi|315469374|gb|ADU25978.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3]
Length = 122
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 25/128 (19%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
N+ +++V LT I G GR+ ++ ++K I+ + R + +EE+V +
Sbjct: 6 GVNLPNEKRVEIGLTYIFGIGRKSADDIIKATGINPDIRVKDLTEEQVSLL--------- 56
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
+DI+D +Y T L ++ +++RL ++ +RG+RH GL VRG
Sbjct: 57 -----------RDIIDKEY-----TIEGDLRRRVALNIKRLVEVGCYRGVRHRKGLPVRG 100
Query: 122 QHTKTTGR 129
Q TKT R
Sbjct: 101 QRTKTNAR 108
>gi|420439365|ref|ZP_14938330.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-29]
gi|393053987|gb|EJB54922.1| 30S ribosomal protein S13 [Helicobacter pylori Hp H-29]
Length = 120
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ I +KR E SE+EV I
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L V+G L K++ D++ L + +RG+RH GL VRGQ
Sbjct: 59 KIQQSYL------VEG-----------DLRKKVQVDIKSLMDLGNYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|406931128|gb|EKD66439.1| 30S ribosomal protein S13 [uncultured bacterium (gcode 4)]
Length = 121
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 28/132 (21%)
Query: 11 VMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLN 70
V ALT + G+ SN VL + I NK+ SEEE+DKI + + + +W L
Sbjct: 15 VEIALTYVYWVGKSLSNKVLDEVKIQKNKKIETLSEEELDKI----RDELKKHVIEWDLR 70
Query: 71 RQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG-- 128
R+ + ++++RL++I ++RG+RH L VR Q TKT
Sbjct: 71 RE----------------------VSQNIKRLQEINSYRGLRHKKHLPVRWQRTKTNSRT 108
Query: 129 RRGRTVGVSKKK 140
R+ + V ++ KK
Sbjct: 109 RKWKAVSIANKK 120
>gi|419418617|ref|ZP_13958931.1| 30S ribosomal protein S13 [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|384373914|gb|EIE29360.1| 30S ribosomal protein S13 [Helicobacter pylori NCTC 11637 = CCUG
17874]
Length = 120
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ I +KR E SE+EV I +
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI------ 60
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
+Q +V+G L K++ D++ L + +RG+RH GL VRGQ
Sbjct: 61 --------QQSHLVEG-----------DLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|418057119|ref|ZP_12695167.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans 1NES1]
gi|353204820|gb|EHB70232.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans 1NES1]
Length = 125
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 27/141 (19%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
NI ++V AL I G G +FS + +K +I +R + ++ EV +I
Sbjct: 6 GVNIPTGKRVEIALRYIHGIGPKFSKEICQKCNIPAERRVNQLTDAEVLQI--------- 56
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
++ +D Y T L +++ +++RL + +RG+RH GL VRG
Sbjct: 57 -----------RETIDRDY-----TVEGDLRREVQTNIKRLMDLGCYRGLRHRKGLPVRG 100
Query: 122 Q--HTKTTGRRGRTVGVSKKK 140
Q HT R+G+ V ++ KK
Sbjct: 101 QRTHTNARTRKGKAVPIAGKK 121
>gi|315453713|ref|YP_004073983.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179]
gi|315132765|emb|CBY83393.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179]
Length = 120
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 27/123 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKII-TIMTNPRQYKIPD 66
K+++ +ALT I G G + S +L K I L+KR E E+EV I I N
Sbjct: 12 KKRIEYALTYIYGIGLKSSRDILHKVGISLDKRVHELGEDEVSSITKEIQAN-------- 63
Query: 67 WFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKT 126
IV+G L K++ D++ L + ++RG+RH GL VRGQ TK
Sbjct: 64 -------HIVEG-----------DLRKKVQMDIKALMDLGSYRGIRHRKGLPVRGQTTKN 105
Query: 127 TGR 129
R
Sbjct: 106 NAR 108
>gi|410668862|ref|YP_006921233.1| 30S ribosomal protein S13 [Thermacetogenium phaeum DSM 12270]
gi|409106609|gb|AFV12734.1| 30S ribosomal protein S13 [Thermacetogenium phaeum DSM 12270]
Length = 123
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G GR + VL+K + R + +EEEV K+
Sbjct: 13 KRVDVALTYIYGIGRTSAQEVLRKTGVKPETRVKDLTEEEVGKL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+D++D +Y L ++ +++RL +I +RG+RH GL RGQ T+T
Sbjct: 57 ----QDVIDREYK-----VEGDLRREVSMNIKRLIEIGCYRGLRHRRGLPTRGQRTRTNA 107
Query: 129 --RRG--RTVGVSKKK 140
R+G +TVGV +KK
Sbjct: 108 RTRKGPRKTVGVHRKK 123
>gi|225630280|ref|YP_002727071.1| ribosomal protein S13 [Wolbachia sp. wRi]
gi|225592261|gb|ACN95280.1| ribosomal protein S13 [Wolbachia sp. wRi]
Length = 112
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 27/125 (21%)
Query: 11 VMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLN 70
V FALT I G G +N++ ++D KR E +E+++KI + +
Sbjct: 5 VPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFI-------------- 50
Query: 71 RQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ--HTKTTG 128
RQ +++G +L ++ +++ L ++ +RG+RH GL VRGQ HT
Sbjct: 51 RQNYVIEG-----------ELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKT 99
Query: 129 RRGRT 133
R+GR+
Sbjct: 100 RKGRS 104
>gi|302850780|ref|XP_002956916.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f.
nagariensis]
gi|300257797|gb|EFJ42041.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f.
nagariensis]
Length = 137
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 29/138 (21%)
Query: 5 IDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKI 64
I +++ +L I G G+ + +L+ ++ NK+ E +EEEV+K+
Sbjct: 23 IPNSKRIEVSLQYIYGIGQTTAQTILRDTGVE-NKKTYELNEEEVNKL------------ 69
Query: 65 PDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHT 124
RQ+ VD KY T+ A L + ++++RLK I +RG RH GL VRGQ T
Sbjct: 70 ------RQE--VD-KY-----TTEADLRRIVSQNIKRLKDIGCYRGRRHIMGLPVRGQRT 115
Query: 125 KTTG--RRGRTVGVSKKK 140
KT R+G+ V+ KK
Sbjct: 116 KTNARTRKGKAKTVANKK 133
>gi|384896569|ref|YP_005770558.1| 30S ribosomal protein S13 [Helicobacter pylori 35A]
gi|315587185|gb|ADU41566.1| 30S ribosomal protein S13 [Helicobacter pylori 35A]
Length = 120
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ I +KR E SE+EV I
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKNSREILEAVGISFDKRVHELSEDEVSSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L V+G L K++ D++ L + +RG+RH GL VRGQ
Sbjct: 59 KIQQSYL------VEG-----------DLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|197303836|ref|ZP_03168872.1| hypothetical protein RUMLAC_02575 [Ruminococcus lactaris ATCC
29176]
gi|197297129|gb|EDY31693.1| 30S ribosomal protein S13 [Ruminococcus lactaris ATCC 29176]
Length = 127
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR ++ +LK A ++ + R + + EEV KI ++
Sbjct: 18 KRVEIGLTYIYGIGRTSADRILKDAGVNPDTRVRDLTSEEVKKISAVID----------- 66
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+ +V+G L +++ +++RLK+I +RG+RH GL VRGQ TKT
Sbjct: 67 ---ETQVVEG-----------DLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNA 112
Query: 129 R 129
R
Sbjct: 113 R 113
>gi|52426081|ref|YP_089218.1| 30S ribosomal protein S13 [Mannheimia succiniciproducens MBEL55E]
gi|81386597|sp|Q65QX7.1|RS13_MANSM RecName: Full=30S ribosomal protein S13
gi|52308133|gb|AAU38633.1| RpsM protein [Mannheimia succiniciproducens MBEL55E]
Length = 118
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
NI + + ALTAI G G+ S + A I N + E SEE++DK+
Sbjct: 8 NIPDHKHTVIALTAIYGIGKTRSQAICAAAGIAENVKISELSEEQIDKL----------- 56
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
+D V GK+ T L ++ +++RL + +RG+RH GL VRGQ
Sbjct: 57 ---------RDEV-GKF-----TVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQR 101
Query: 124 TKTTGR 129
TKT R
Sbjct: 102 TKTNAR 107
>gi|363890361|ref|ZP_09317699.1| 30S ribosomal protein S13 [Eubacteriaceae bacterium CM5]
gi|363893508|ref|ZP_09320606.1| 30S ribosomal protein S13 [Eubacteriaceae bacterium ACC19a]
gi|361963812|gb|EHL16878.1| 30S ribosomal protein S13 [Eubacteriaceae bacterium ACC19a]
gi|361965805|gb|EHL18776.1| 30S ribosomal protein S13 [Eubacteriaceae bacterium CM5]
Length = 122
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V+ LT I G G++ S+ +L I + R + +EEEV+
Sbjct: 13 KRVIIGLTYIYGIGKKTSSKILATTGISEDTRIKDLTEEEVN-----------------L 55
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L ++ +D Y T L ++ +++RL+ IR +RG+RH GL VRGQ TKT
Sbjct: 56 LRKE---IDANY-----TVEGDLRREVSLNIKRLRDIRCYRGLRHMKGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|433654125|ref|YP_007297833.1| 30S ribosomal protein S13 [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292314|gb|AGB18136.1| 30S ribosomal protein S13 [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 122
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR +N +L KA ++ + R + +E+EV
Sbjct: 12 EKRVEIGLTYIYGIGRSRANEILAKAGVNPDTRVKDLTEDEV------------------ 53
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+R +DI+D +Y L ++ +++RL I +RG+RH GL VRGQ T+T
Sbjct: 54 --SRLRDIIDKEYK-----VEGDLRREVSLNIKRLIDIGCYRGIRHRKGLPVRGQRTRTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|302337499|ref|YP_003802705.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293]
gi|301634684|gb|ADK80111.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293]
Length = 121
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 25/117 (21%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
+LT I G GR + + KKA ID + + + S E+V+K+ T+
Sbjct: 16 ISLTYIYGIGRSSAMEICKKAGIDPDSKMNDLSAEDVNKLRTL----------------- 58
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
+D Y T +L +++ +++RL I +RG+RH GL VRGQ TKT R
Sbjct: 59 ---IDSDY-----TVEGRLRTQIALNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNAR 107
>gi|187918366|ref|YP_001883929.1| 30S ribosomal protein S13 [Borrelia hermsii DAH]
gi|226712700|sp|B2S0K3.1|RS13_BORHD RecName: Full=30S ribosomal protein S13
gi|119861214|gb|AAX17009.1| SSU ribosomal protein S13P [Borrelia hermsii DAH]
Length = 125
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 27/139 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++ +++ ALT+I G GR + + +K + +KRA E +EV+K+ I+ +
Sbjct: 8 DLPNNKQLQIALTSIYGIGRARALEICEKTGVLPDKRAKELDNDEVNKLRKIIES----- 62
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
D+ +V+GK L S+L ++RL I +RG+RH GL +RGQ
Sbjct: 63 --DY-------VVEGK-----------LRSELAMSIKRLMDIACYRGLRHRKGLPLRGQR 102
Query: 124 TKTTG--RRGRTVGVSKKK 140
TKT R+G+ V+ KK
Sbjct: 103 TKTNARTRKGKRKTVANKK 121
>gi|386747808|ref|YP_006221016.1| 30S ribosomal protein S13 [Helicobacter cetorum MIT 99-5656]
gi|384554050|gb|AFI05806.1| 30S ribosomal protein S13 [Helicobacter cetorum MIT 99-5656]
Length = 120
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ I +KR E SE+E I
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEASSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L V+G L K++ D++ L + ++RG+RH GL VRGQ
Sbjct: 59 KIQQSYL------VEG-----------DLRKKVQMDIKSLMDLGSYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|197117347|ref|YP_002137774.1| 30S ribosomal protein S13 [Geobacter bemidjiensis Bem]
gi|253701898|ref|YP_003023087.1| 30S ribosomal protein S13 [Geobacter sp. M21]
gi|226712741|sp|B5EFS4.1|RS13_GEOBB RecName: Full=30S ribosomal protein S13
gi|259494680|sp|C6E4N3.1|RS13_GEOSM RecName: Full=30S ribosomal protein S13
gi|197086707|gb|ACH37978.1| ribosomal protein S13 [Geobacter bemidjiensis Bem]
gi|251776748|gb|ACT19329.1| ribosomal protein S13 [Geobacter sp. M21]
Length = 122
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 37/139 (26%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+++ ALT I G GR S +L A +D+N R +E EV KI R+Y
Sbjct: 13 KRIEIALTYIYGIGRSLSQEILTAAGVDMNTRCDNLTEAEVTKI-------REY------ 59
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGLRVRGQHT 124
+ +++ LR D ++RL + +RG+RH GL RGQ T
Sbjct: 60 ----------------IDKNVKVEGDLRRDISMSIKRLMDLGCYRGLRHRKGLPCRGQRT 103
Query: 125 KTTGRR----GRTVGVSKK 139
KT R RTV KK
Sbjct: 104 KTNARTRKGPARTVAGKKK 122
>gi|254779838|ref|YP_003057944.1| 30S ribosomal protein S13 [Helicobacter pylori B38]
gi|384898470|ref|YP_005773849.1| 30S ribosomal protein S13 [Helicobacter pylori F30]
gi|254001750|emb|CAX29981.1| 30S ribosomal subunit protein S13 [Helicobacter pylori B38]
gi|317178413|dbj|BAJ56201.1| 30S ribosomal protein S13 [Helicobacter pylori F30]
Length = 120
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
++ K++V +ALT I G G + S +L+ + +KR E SE+EV I
Sbjct: 7 VDLPKKKRVEYALTYIYGIGLKSSREILEAVGVSFDKRVHELSEDEVSSIAK-------- 58
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
KI +L V+G L K++ D++ L + +RG+RH GL VRGQ
Sbjct: 59 KIQQSYL------VEG-----------DLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQ 101
Query: 123 HTKTTGR----RGRTVG 135
TK R + +TVG
Sbjct: 102 TTKNNARTRKGKKKTVG 118
>gi|304438882|ref|ZP_07398805.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372548|gb|EFM26131.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 120
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 36/139 (25%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR SN +LK A+++ + R + +E EV +I
Sbjct: 12 EKRVEIGLTYIFGIGRSRSNEILKNAEVNPDTRVKDLTEAEVARI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGLRVRGQH 123
+ +D KY ++ LR D ++RL++I+ +RG+RH GL VRGQ+
Sbjct: 57 -----RSEID-KY---------HVEGDLRRDVAMNIKRLREIKCYRGIRHMRGLPVRGQN 101
Query: 124 TKTTG--RRGRTVGVSKKK 140
TK R+G VSKKK
Sbjct: 102 TKNNARTRKGPKKLVSKKK 120
>gi|268316432|ref|YP_003290151.1| 30S ribosomal protein S13 [Rhodothermus marinus DSM 4252]
gi|345303854|ref|YP_004825756.1| 30S ribosomal protein S13 [Rhodothermus marinus SG0.5JP17-172]
gi|262333966|gb|ACY47763.1| ribosomal protein S13 [Rhodothermus marinus DSM 4252]
gi|345113087|gb|AEN73919.1| 30S ribosomal protein S13 [Rhodothermus marinus SG0.5JP17-172]
Length = 126
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 25/117 (21%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
ALTAI G G+ + +L + +D N R + +EE+ +I I+ Q
Sbjct: 17 IALTAIYGIGKSRAKEILSRVGLDPNTRPKDWTEEQTREIRRIIE--------------Q 62
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
+ +V+G QL ++++ +++RL I +RG+RH GL VRGQ T+T R
Sbjct: 63 EYVVEG-----------QLRAEIQMNIKRLMDIGCYRGIRHRLGLPVRGQRTRTNAR 108
>gi|269986392|gb|EEZ92683.1| 30S ribosomal protein S13P [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 101
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 50 DKIITIMTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHR 109
+++ ++NP +YK+P W N ++D G +L + +L SK ++++K R+++
Sbjct: 1 NELKEALSNPFKYKLPHWLFNWRRDETTGLDYHLL---SNELRSKTTMQIQKIKTSRSYK 57
Query: 110 GMRHYWGLRVRGQHTKT-----TGRRGRTVGVSKKK 140
G RH + ++RGQ ++ GR G ++GV +KK
Sbjct: 58 GYRHSFSYKLRGQKVRSRGANVHGRVGSSLGVVRKK 93
>gi|302839950|ref|XP_002951531.1| hypothetical protein VOLCADRAFT_61524 [Volvox carteri f.
nagariensis]
gi|300263140|gb|EFJ47342.1| hypothetical protein VOLCADRAFT_61524 [Volvox carteri f.
nagariensis]
Length = 81
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 16/67 (23%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK K+M+A+TAIKG GRRF V KKA+++ IT++ +P
Sbjct: 17 LNTNVDGKNKIMYAMTAIKGIGRRFPKQVCKKAEVE----------------ITVIGDPV 60
Query: 61 QYKIPDW 67
Q + W
Sbjct: 61 QTETAIW 67
>gi|262197165|ref|YP_003268374.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365]
gi|262080512|gb|ACY16481.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365]
Length = 127
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+++ ALT I G GRR SN +L KA I +KR + E +V I
Sbjct: 13 KRIEIALTYIYGIGRRRSNELLDKAGITPDKRTDDLDENDVRMI---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+D+++ Y L ++ +++RL + +RG+RH GL VRGQ T T
Sbjct: 57 ----RDVIEANYK-----VEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTSTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|417859642|ref|ZP_12504698.1| 30S ribosomal protein S13 [Agrobacterium tumefaciens F2]
gi|338822706|gb|EGP56674.1| 30S ribosomal protein S13 [Agrobacterium tumefaciens F2]
Length = 122
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 35/145 (24%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
NI ++V+ ALT I G G +F+ +++K + +KR + ++ EV +I
Sbjct: 6 GVNIPTAKRVVIALTYIHGIGPKFAQEIMEKVGLPADKRVHQLTDAEVLQI--------- 56
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGL 117
++ +D Y Q++ LR D ++RL + +RG+RH GL
Sbjct: 57 -----------REAIDRDY---------QVEGDLRRDTSMNIKRLMDLGCYRGLRHRRGL 96
Query: 118 RVRGQ--HTKTTGRRGRTVGVSKKK 140
VRGQ HT R+G ++ KK
Sbjct: 97 PVRGQRTHTNARTRKGPAKAIAGKK 121
>gi|291549396|emb|CBL25658.1| 30S ribosomal protein S13 [Ruminococcus torques L2-14]
Length = 122
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR + +LK A ++ + R + + EEV KI ++
Sbjct: 13 KRVEIGLTYIYGIGRTSAERILKDAGVNPDTRVRDLTSEEVKKISAVID----------- 61
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+ +V+G L +++ +++RLK+I +RG+RH GL VRGQ TKT
Sbjct: 62 ---ETQVVEG-----------DLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|289423653|ref|ZP_06425452.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L]
gi|429727996|ref|ZP_19262742.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius VPI 4330]
gi|289155903|gb|EFD04569.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L]
gi|429150853|gb|EKX93747.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius VPI 4330]
Length = 123
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 27/135 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++ LT I G GR SN +L KA I + R + S++EV
Sbjct: 12 EKRAEIGLTYIYGIGRATSNEILAKAGISKDARIKDLSDDEV------------------ 53
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
N + I+D Y L ++ +++RL+ I+ +RGMRH GL +RGQ TKT
Sbjct: 54 --NVLRKIIDEDY-----LVEGDLRREISLNIKRLRDIKCYRGMRHAKGLPLRGQKTKTN 106
Query: 128 G--RRGRTVGVSKKK 140
R+G VS+KK
Sbjct: 107 ARTRKGPRKTVSRKK 121
>gi|223936406|ref|ZP_03628318.1| ribosomal protein S13 [bacterium Ellin514]
gi|223894924|gb|EEF61373.1| ribosomal protein S13 [bacterium Ellin514]
Length = 131
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 28/142 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ I G++++ +L I G G + +L+ A ID + RA + SE+++ +I+
Sbjct: 5 IGVEIPGEKRIDISLRYIYGIGPVNAKEILENAKIDPSIRAKDLSEQQMSQIV------- 57
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
I +GKY L +L +L+RL+ I+ +RG+RH L VR
Sbjct: 58 ------------HAIQEGKY-----VIEGDLRRELGMNLKRLQGIKCYRGVRHLRSLPVR 100
Query: 121 GQHTKTTG--RRG--RTVGVSK 138
GQ T+T R+G +TVGV +
Sbjct: 101 GQRTQTNARTRKGPRKTVGVQR 122
>gi|406948442|gb|EKD79159.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 130
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 5 IDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKI 64
+ G++++ AL + G G S VLK+A ++ + RA + +E EV+ TI T + I
Sbjct: 9 LPGEKRIEVALAYLYGVGIPLSKKVLKQAKVNPDTRAKDLTEAEVN---TIKTTLDKMAI 65
Query: 65 PDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHT 124
P V+G L +L +++RLK+I ++RG RH L RGQ T
Sbjct: 66 P----------VEG-----------DLRRELFANIKRLKEIGSYRGTRHMKRLPARGQST 104
Query: 125 KTTGR 129
KT R
Sbjct: 105 KTNSR 109
>gi|363891240|ref|ZP_09318419.1| 30S ribosomal protein S13 [Eubacteriaceae bacterium CM2]
gi|402837817|ref|ZP_10886332.1| 30S ribosomal protein S13 [Eubacteriaceae bacterium OBRC8]
gi|361965297|gb|EHL18279.1| 30S ribosomal protein S13 [Eubacteriaceae bacterium CM2]
gi|402274248|gb|EJU23432.1| 30S ribosomal protein S13 [Eubacteriaceae bacterium OBRC8]
Length = 122
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V+ LT I G G++ S+ +L I + R + +EEEV+
Sbjct: 13 KRVIIGLTYIYGIGKKTSSKILATTGISEDTRIKDLTEEEVN-----------------L 55
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L ++ +D Y T L ++ +++RL+ IR +RG+RH GL VRGQ TKT
Sbjct: 56 LRKE---IDNNY-----TVEGDLRREVTLNIKRLRDIRCYRGLRHMKGLPVRGQKTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
>gi|87306333|ref|ZP_01088480.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645]
gi|87290512|gb|EAQ82399.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645]
Length = 123
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M +I + +LT + G G R + + K I ++AGE E+E+ +I ++
Sbjct: 1 MGVDIPNDKPTWISLTYLYGVGPRTARELCVKVGISQERKAGELHEDELSRIAGLL---- 56
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+ T L ++ ++++RL +I +RGMRH GL VR
Sbjct: 57 ---------------------ETEYTVEGPLRRQIAQNIQRLNRIVCYRGMRHRRGLPVR 95
Query: 121 GQHTKTTGR 129
GQ T+T R
Sbjct: 96 GQRTRTNAR 104
>gi|159901448|ref|YP_001547695.1| 30S ribosomal protein S13 [Herpetosiphon aurantiacus DSM 785]
gi|226712747|sp|A9B434.1|RS13_HERA2 RecName: Full=30S ribosomal protein S13
gi|159894487|gb|ABX07567.1| ribosomal protein S13 [Herpetosiphon aurantiacus DSM 785]
Length = 127
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 30/141 (21%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+I ++V +LT I G GR S +L + +I+ N R + +E+EV ++
Sbjct: 8 DIPRNKRVEISLTYIYGIGRTTSTEILARTNINPNVRVKDLTEDEVIRL----------- 56
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 123
++I+D Y T L ++ +++RL I +RG+RH GL +RGQ
Sbjct: 57 ---------REIIDQDY-----TVEGDLRRAVQLNIKRLMDIGCYRGIRHRKGLPLRGQR 102
Query: 124 TKTT-----GRRGRTVGVSKK 139
TKT G++G +G KK
Sbjct: 103 TKTNARTRRGKKGAAIGGKKK 123
>gi|32477616|ref|NP_870610.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1]
gi|81658839|sp|Q7UIC7.1|RS13_RHOBA RecName: Full=30S ribosomal protein S13
gi|32448170|emb|CAD77687.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1]
Length = 127
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M +I +++ ++LT + G G + V +K ID A + S+E+V +I ++ R
Sbjct: 5 MGVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALLE--R 62
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Y +V+G L ++ +++ R+++I+++RG+RH L VR
Sbjct: 63 DY------------LVEGP-----------LRRQVTQNISRMREIKSYRGIRHRVSLPVR 99
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 100 GQRTKTNAR 108
>gi|406708045|ref|YP_006758397.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB59]
gi|406653821|gb|AFS49220.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB59]
Length = 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
N+ ++ + +LT I G G +F+ +LK D+D KR + +E+E+ KI
Sbjct: 8 NLPVNKRALVSLTYIHGIGPKFALDILKANDLDHTKRIKDFTEDEISKI----------- 56
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ- 122
+ ++ Y T L + ++++RLK + +RG+RH L RGQ
Sbjct: 57 ---------RKSIEESY-----TVEGDLRRVVSQNIKRLKDLGCYRGLRHRRQLPTRGQR 102
Query: 123 -HTKTTGRRGRTVGVSKKK 140
HT R+G+ V ++ KK
Sbjct: 103 THTNARTRKGKAVAIAGKK 121
>gi|417304770|ref|ZP_12091776.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica WH47]
gi|421609461|ref|ZP_16050655.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica SH28]
gi|440718167|ref|ZP_20898631.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica
SWK14]
gi|449135502|ref|ZP_21770960.1| Ribosomal protein S13, bacterial-type [Rhodopirellula europaea 6C]
gi|327538950|gb|EGF25588.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica WH47]
gi|408499791|gb|EKK04256.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica SH28]
gi|436436709|gb|ELP30429.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica
SWK14]
gi|448885889|gb|EMB16302.1| Ribosomal protein S13, bacterial-type [Rhodopirellula europaea 6C]
Length = 123
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 25/129 (19%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M +I +++ ++LT + G G + V +K ID A + S+E+V +I ++ R
Sbjct: 1 MGVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALLE--R 58
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
Y +V+G L ++ +++ R+++I+++RG+RH L VR
Sbjct: 59 DY------------LVEGP-----------LRRQVTQNISRMREIKSYRGIRHRVSLPVR 95
Query: 121 GQHTKTTGR 129
GQ TKT R
Sbjct: 96 GQRTKTNAR 104
>gi|408380590|ref|ZP_11178174.1| 30S ribosomal protein S13 [Agrobacterium albertimagni AOL15]
gi|407745803|gb|EKF57335.1| 30S ribosomal protein S13 [Agrobacterium albertimagni AOL15]
Length = 122
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 35/145 (24%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
NI ++V+ ALT I G G +F++ +++K + KR + ++ EV +I
Sbjct: 6 GVNIPTAKRVVIALTYIHGIGPKFASEIMEKVGLPAEKRVHQLTDAEVLQI--------- 56
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGL 117
++ +D Y Q++ LR D ++RL + +RG+RH GL
Sbjct: 57 -----------RETIDRDY---------QVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGL 96
Query: 118 RVRGQ--HTKTTGRRGRTVGVSKKK 140
VRGQ HT R+G ++ KK
Sbjct: 97 PVRGQRTHTNARTRKGPAKAIAGKK 121
>gi|384209990|ref|YP_005595710.1| 30S ribosomal protein S13 [Brachyspira intermedia PWS/A]
gi|343387640|gb|AEM23130.1| 30S ribosomal protein S13 [Brachyspira intermedia PWS/A]
Length = 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 37/144 (25%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M I +++ ALT I G GR ++++ KA+ID + +A
Sbjct: 1 MGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKA------------------- 41
Query: 61 QYKIPDWFLNRQKDIVDGKYSQI--LLTSTAQLDSKLREDL----ERLKKIRAHRGMRHY 114
KD+ D + + + + +T +++ LR +L +RLK I ++RGMRH
Sbjct: 42 ------------KDLTDAQITALRDAIEATTKVEGDLRTELYNNIKRLKDIHSYRGMRHI 89
Query: 115 WGLRVRGQHTKTTGRRGRTVGVSK 138
L V GQ T+T R R G K
Sbjct: 90 KRLPVHGQRTRTNSRNARGGGARK 113
>gi|255530538|ref|YP_003090910.1| 30S ribosomal protein S13 [Pedobacter heparinus DSM 2366]
gi|255343522|gb|ACU02848.1| ribosomal protein S13 [Pedobacter heparinus DSM 2366]
Length = 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 27/130 (20%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
LT I G GR + +L +A ID NK+ + S++E+ I TI
Sbjct: 17 IGLTYIFGVGRATAQRILTEAGIDFNKKVQDWSDDELSAIRTI----------------- 59
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG--RR 130
I DG + L S QL+ ++RL I +RG+RH GL VRGQ TK R+
Sbjct: 60 --INDGVKVEGALRSEVQLN------IKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRK 111
Query: 131 GRTVGVSKKK 140
G+ V+ KK
Sbjct: 112 GKRKTVANKK 121
>gi|225621049|ref|YP_002722307.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1]
gi|225215869|gb|ACN84603.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1]
Length = 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 37/144 (25%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M I +++ ALT I G GR ++++ KA+ID + +A
Sbjct: 1 MGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKA------------------- 41
Query: 61 QYKIPDWFLNRQKDIVDGKYSQI--LLTSTAQLDSKLREDL----ERLKKIRAHRGMRHY 114
KD+ D + + + + +T +++ LR +L +RLK I ++RGMRH
Sbjct: 42 ------------KDLTDAQITALRDAIEATTKVEGDLRTELYNNIKRLKDIHSYRGMRHI 89
Query: 115 WGLRVRGQHTKTTGRRGRTVGVSK 138
L V GQ T+T R R G K
Sbjct: 90 KRLPVHGQRTRTNSRNARGGGARK 113
>gi|296126888|ref|YP_003634140.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563]
gi|429123843|ref|ZP_19184375.1| 30S ribosomal protein S13 [Brachyspira hampsonii 30446]
gi|445062097|ref|ZP_21374532.1| 30S ribosomal protein S13 [Brachyspira hampsonii 30599]
gi|296018704|gb|ADG71941.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563]
gi|426280412|gb|EKV57427.1| 30S ribosomal protein S13 [Brachyspira hampsonii 30446]
gi|444506492|gb|ELV06819.1| 30S ribosomal protein S13 [Brachyspira hampsonii 30599]
Length = 129
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 25/138 (18%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M I +++ ALT I G GR ++++ KA+ID + +A + ++ ++ +
Sbjct: 5 MGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITAL-------- 56
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR 120
+D ++ L ++L +++RLK I ++RGMRH L V
Sbjct: 57 ------------RDAIEATTK-----VEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVH 99
Query: 121 GQHTKTTGRRGRTVGVSK 138
GQ T+T R R G K
Sbjct: 100 GQRTRTNSRNARGGGARK 117
>gi|406932206|gb|EKD67280.1| 30S ribosomal protein S13 [uncultured bacterium]
Length = 128
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 5 IDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKI 64
I +++V+ ALT +KG G S +L+ A +D + R + ++E+ DKI
Sbjct: 8 IPKQKRVVIALTYVKGVGLTSSKKILENAGVDESVRVKDLTQEQEDKI------------ 55
Query: 65 PDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHT 124
+ I++G Y + L + +++RLK I+++RG RH L RGQ T
Sbjct: 56 --------RAILEGGY-----ITEGDLRRDVAANIKRLKDIKSYRGSRHIKRLPARGQRT 102
Query: 125 KTTGR 129
KT R
Sbjct: 103 KTNSR 107
>gi|220928233|ref|YP_002505142.1| 30S ribosomal protein S13 [Clostridium cellulolyticum H10]
gi|254811141|sp|B8I805.1|RS13_CLOCE RecName: Full=30S ribosomal protein S13
gi|219998561|gb|ACL75162.1| ribosomal protein S13 [Clostridium cellulolyticum H10]
Length = 122
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 27/135 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G GR +N +L K ++ + R + +++EV+KI
Sbjct: 12 EKRVEVGLTYIYGIGRPKANEILVKTGVNPDTRVRDLTDDEVNKI--------------- 56
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
++I+D +Y L ++ +++RL +I +RG RH GL VRGQ TKT
Sbjct: 57 -----REIIDKEYK-----VEGDLRREIALNIKRLTEIGCYRGRRHRMGLPVRGQRTKTN 106
Query: 128 G--RRGRTVGVSKKK 140
R+G + VS KK
Sbjct: 107 ARTRKGPSKPVSGKK 121
>gi|149197864|ref|ZP_01874913.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155]
gi|149139085|gb|EDM27489.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155]
Length = 130
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 37/148 (25%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M +I +K+ +LT I G G + +L+KA ID +KRA E ++ ++ I+
Sbjct: 5 MGVDIPTNKKIKISLTYIYGIGSATALEILEKAKIDPDKRASELNDADISAIVK------ 58
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLE----RLKKIRAHRGMRHYWG 116
LL S+ +++ LR L RL+ + +RG RH
Sbjct: 59 -----------------------LLDSSYEVEGDLRRQLALSVRRLQAVNCYRGRRHKHS 95
Query: 117 LRVRGQHTKTTGR----RGRTVGVSKKK 140
L RGQ TKT R + +T+G + K
Sbjct: 96 LPCRGQRTKTNARTRKGKKKTIGAVRDK 123
>gi|20808635|ref|NP_623806.1| 30S ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4]
gi|32363349|sp|Q8R7X9.1|RS13_THETN RecName: Full=30S ribosomal protein S13
gi|20517269|gb|AAM25410.1| Ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4]
Length = 122
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 27/134 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G GR S +L KA ++ + R + +E+EV K+ I+ ++YK+
Sbjct: 13 KRVEIALTYIYGIGRSRSKEILAKAGVNPDTRVRDLTEDEVSKLREIIE--KEYKV---- 66
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L ++ +++RL I +RG+RH GL VRGQ T+T
Sbjct: 67 -------------------EGDLRKEVAMNIKRLIDIGCYRGIRHKLGLPVRGQRTRTNA 107
Query: 129 --RRGRTVGVSKKK 140
R+G V+KKK
Sbjct: 108 RTRKGPRKTVAKKK 121
>gi|342837483|ref|YP_004778102.1| ribosomal RNA S13 [Candidatus Midichloria mitochondrii IricVA]
Length = 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 27/140 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
NI +KV ALT I G G S+ + ++A ID NKR E ++ E+ K+
Sbjct: 7 VNIPTNKKVGVALTYIYGIGDLSSSKICRQASIDGNKRVHELTDGEIIKL---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++++D Y L ++ +++ L I+ +RG RH L VRGQ
Sbjct: 57 ----------REVIDSNYK-----VEGDLRREISTNIKNLIDIKCYRGTRHIRRLPVRGQ 101
Query: 123 --HTKTTGRRGRTVGVSKKK 140
HT R+G+ + ++ KK
Sbjct: 102 RTHTNARTRKGKAIAIAGKK 121
>gi|254458644|ref|ZP_05072068.1| ribosomal protein S13p/S18e [Sulfurimonas gotlandica GD1]
gi|373867160|ref|ZP_09603558.1| ribosomal protein S13 [Sulfurimonas gotlandica GD1]
gi|207084410|gb|EDZ61698.1| ribosomal protein S13p/S18e [Sulfurimonas gotlandica GD1]
gi|372469261|gb|EHP29465.1| ribosomal protein S13 [Sulfurimonas gotlandica GD1]
Length = 120
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 29/134 (21%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
K++V + LT I G G S ++L ID NKR E +E +V I +
Sbjct: 12 KKRVEYGLTYIYGIGLHASRLILDATGIDYNKRVFELNEADVAAITAEI----------- 60
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
R+ +V+G L K+ D++ L + ++RG+RH GL RGQ TKT
Sbjct: 61 ---RENHMVEG-----------DLRKKVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTN 106
Query: 128 GR----RGRTVGVS 137
R + +TVG +
Sbjct: 107 ARTRKGKRKTVGAA 120
>gi|381181180|ref|ZP_09890015.1| SSU ribosomal protein S13P [Treponema saccharophilum DSM 2985]
gi|380766847|gb|EIC00851.1| SSU ribosomal protein S13P [Treponema saccharophilum DSM 2985]
Length = 123
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+ V+ ALT I G GR + ++ +K ID NK + ++E K+ TI+ +YK+
Sbjct: 12 KHVVIALTYIYGIGRSSAKLICEKTKIDPNKMLNDLDQDEQAKLRTIIDE--EYKV---- 65
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L S++ +++RL I +RG+RH GL VRGQ T+T
Sbjct: 66 -------------------EGHLRSEIGLNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNS 106
Query: 129 R 129
R
Sbjct: 107 R 107
>gi|149279640|ref|ZP_01885769.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39]
gi|149229676|gb|EDM35066.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39]
Length = 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 27/130 (20%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
LT I G GR + +L +A ID NK+ + S++E+ I TI
Sbjct: 17 IGLTYIFGIGRSTAQRILTEAGIDFNKKVQDWSDDELSAIRTI----------------- 59
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG--RR 130
I DG + L S QL+ ++RL I +RG+RH GL VRGQ TK R+
Sbjct: 60 --INDGVKVEGALRSEVQLN------IKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRK 111
Query: 131 GRTVGVSKKK 140
G+ V+ KK
Sbjct: 112 GKRKTVANKK 121
>gi|338739375|ref|YP_004676337.1| 30S ribosomal protein S13 [Hyphomicrobium sp. MC1]
gi|337759938|emb|CCB65769.1| 30S ribosomal protein S13 [Hyphomicrobium sp. MC1]
Length = 125
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 27/140 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
NI ++V AL I G G +FS + +K I +R + ++ EV +I
Sbjct: 7 VNIPTGKRVEIALRYIHGIGPKFSKEICEKCSIPPERRVNQLTDAEVLQI---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++ +D Y T L +++ +++RL + +RG+RH GL VRGQ
Sbjct: 57 ----------RETIDRDY-----TVEGDLRREVQTNIKRLMDLGCYRGLRHRKGLPVRGQ 101
Query: 123 --HTKTTGRRGRTVGVSKKK 140
HT R+G+ V ++ KK
Sbjct: 102 RTHTNARTRKGKAVPIAGKK 121
>gi|297618358|ref|YP_003703517.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680]
gi|297146195|gb|ADI02952.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680]
Length = 123
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V+ ALT I G GR + ++K+ I+ + R + +EEE+ KI
Sbjct: 13 KRVVVALTYIFGIGRSSAEKIVKETGINPDTRVKDLTEEEIAKI---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
++ +D Y +L ++ +++RL I +RG+RH GL VRGQ T+T
Sbjct: 57 ----REAIDRGYK-----VEGELRREISMNIKRLIDIGCYRGIRHRRGLPVRGQRTRTNA 107
Query: 129 --RRG--RTVGVSKKK 140
R+G RTVG +KK
Sbjct: 108 RTRKGPRRTVGTKRKK 123
>gi|325294421|ref|YP_004280935.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325064869|gb|ADY72876.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 126
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 25/128 (19%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+I +KV ++L I G G + + ++A ID KR + +EEE+ KI I+ +
Sbjct: 6 GVDIPDNKKVPYSLAYIYGIGIKTGFKICEEAGIDPEKRVKDLTEEEIAKIRKIIET--E 63
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRG 121
YK+ L ++ +++RL +I +RG+RH GL VRG
Sbjct: 64 YKV-----------------------EGDLRKEIAMNIKRLMEIGCYRGIRHRLGLPVRG 100
Query: 122 QHTKTTGR 129
Q T+T R
Sbjct: 101 QRTRTNAR 108
>gi|83814971|ref|YP_445189.1| 30S ribosomal protein S13 [Salinibacter ruber DSM 13855]
gi|294507073|ref|YP_003571131.1| 30S ribosomal protein S13 [Salinibacter ruber M8]
gi|123529118|sp|Q2S3P2.1|RS13_SALRD RecName: Full=30S ribosomal protein S13
gi|83756365|gb|ABC44478.1| ribosomal protein S13p/S18e [Salinibacter ruber DSM 13855]
gi|294343401|emb|CBH24179.1| 30S ribosomal protein S13 [Salinibacter ruber M8]
Length = 127
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 25/117 (21%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
ALT I G G+ ++ +L+KA++ ++KR E +E E ++
Sbjct: 17 IALTDIYGVGQSRASEILEKAEVSVDKRPREWTESETKRV-------------------- 56
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
+ I++ Y T QL ++++ +++RLK+I +RG RH GL V GQ T+T R
Sbjct: 57 RRIIEEDY-----TVEGQLRTEVQMNIKRLKEIGCYRGKRHREGLPVNGQRTRTNAR 108
>gi|410030850|ref|ZP_11280680.1| 30S ribosomal protein S13 [Marinilabilia sp. AK2]
Length = 125
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 27/130 (20%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
LT I G GR + +L+KA+I +K+ GE +++E I
Sbjct: 17 IGLTYIFGIGRSSARAILEKANISYDKKVGEWNDDESTAI-------------------- 56
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG--RR 130
++I+ +Y + L S+++ +++RL I +RG+RH GL VRGQ TK R+
Sbjct: 57 RNIISAEYR-----TEGALKSEIQLNIKRLMDIGCYRGLRHRKGLPVRGQKTKNNARTRK 111
Query: 131 GRTVGVSKKK 140
G+ V+ KK
Sbjct: 112 GKRKTVANKK 121
>gi|452994621|emb|CCQ93726.1| ribosomal protein S13 [Clostridium ultunense Esp]
Length = 122
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 33/130 (25%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+I ++V +LT I G GR SN +LK+ ++ + R + +E+EV++I R+Y
Sbjct: 8 DIPRDKRVEISLTYIYGIGRSTSNKILKETGVNPDTRVKDLTEDEVNRI-------REY- 59
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLRED----LERLKKIRAHRGMRHYWGLRV 119
+ +++ LR + ++RL +I +RG+RH GL V
Sbjct: 60 ---------------------IDKNVKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPV 98
Query: 120 RGQHTKTTGR 129
RGQ TKT R
Sbjct: 99 RGQRTKTNAR 108
>gi|339442877|ref|YP_004708882.1| 30S ribosomal protein S13 [Clostridium sp. SY8519]
gi|338902278|dbj|BAK47780.1| hypothetical protein CXIVA_18140 [Clostridium sp. SY8519]
Length = 122
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 8 KRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDW 67
+++V LT I G G S +L +A +D N R + ++EEV KI ++
Sbjct: 12 EKRVEIGLTYIYGIGLSSSRRILAEAQVDPNTRCKDLTDEEVKKISGVID---------- 61
Query: 68 FLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTT 127
+ +V+G L ++ +++RL++I +RG+RH GL VRGQ TKT
Sbjct: 62 ----ETQVVEG-----------DLRREVAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTN 106
Query: 128 GR 129
R
Sbjct: 107 AR 108
>gi|404449621|ref|ZP_11014610.1| 30S ribosomal protein S13 [Indibacter alkaliphilus LW1]
gi|403764885|gb|EJZ25774.1| 30S ribosomal protein S13 [Indibacter alkaliphilus LW1]
Length = 125
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 27/130 (20%)
Query: 13 FALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLNRQ 72
LT I G GR + +L+KA I +K+AGE +EE I ++ +Y+
Sbjct: 17 IGLTYIFGIGRSSARAILEKAGISFDKKAGEWDDEESTAIRNLIAE--EYR--------- 65
Query: 73 KDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG--RR 130
+ L S+++ +++RL I +RG+RH GL VRGQ TK R+
Sbjct: 66 --------------TEGALKSEIQLNIKRLMDIGCYRGLRHRKGLPVRGQKTKNNARTRK 111
Query: 131 GRTVGVSKKK 140
G+ V+ KK
Sbjct: 112 GKRKTVANKK 121
>gi|365902551|ref|ZP_09440374.1| 30S ribosomal protein S13 [Lactobacillus malefermentans KCTC 3548]
Length = 121
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 28/134 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++++ LT I G G++ S +L +A + + R + + ++ DKI T + + Y +
Sbjct: 13 KRIVIGLTYIFGIGQKTSEKILTEAGVSEDVRVRDLTPDQEDKIRTAIDS---YPV---- 65
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L ++ +++RL++I ++RGMRH GL VRGQHTK
Sbjct: 66 -------------------EGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNA 106
Query: 129 --RRGRTVGVSKKK 140
R+G++V V+ +K
Sbjct: 107 RTRKGKSVSVAGRK 120
>gi|206889222|ref|YP_002249223.1| 30S ribosomal protein S13 [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226712799|sp|B5YG25.1|RS13_THEYD RecName: Full=30S ribosomal protein S13
gi|206741160|gb|ACI20217.1| ribosomal protein S13p/S18e [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 121
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 25/127 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
+I +V LT I G GR SN +LK+ ++ NKR + +++E+ KI + + + Y
Sbjct: 7 VDIPKNERVEIGLTRIFGIGRSLSNKILKETGVEPNKRVKDLTDDEIVKIRSEIE--KNY 64
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
K+ +L ++ +++RL I +RG+RH L VRGQ
Sbjct: 65 KV-----------------------EGELRKEISMNIKRLMDIGCYRGLRHMANLPVRGQ 101
Query: 123 HTKTTGR 129
T+T R
Sbjct: 102 RTRTNSR 108
>gi|326792581|ref|YP_004310402.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427]
gi|326543345|gb|ADZ85204.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427]
Length = 123
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 24/121 (19%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V LT I G GR S +L +A ID + R + +EE+V KI
Sbjct: 13 KRVEIGLTYIFGIGRPTSRQILTEAGIDFDTRIKDLTEEQVSKI-------------REL 59
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
+ + IV+G L ++ +++RL +I +RG+RH GL VRGQ TKT
Sbjct: 60 IEKLGIIVEG-----------DLRREIALNIKRLMEIGCYRGIRHRRGLPVRGQKTKTNA 108
Query: 129 R 129
R
Sbjct: 109 R 109
>gi|261415796|ref|YP_003249479.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385790687|ref|YP_005821810.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372252|gb|ACX74997.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302328112|gb|ADL27313.1| ribosomal protein S13 [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 122
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 11 VMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWFLN 70
V + LTAI G G +N V + ID NK+ + +EEE KI
Sbjct: 15 VEYGLTAIYGVGLFTANKVCAQLGIDKNKKCDDLTEEEQGKI------------------ 56
Query: 71 RQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 129
+ +++ +YS QL +++ +++RL+ I +RG+RH GL VRGQ ++T R
Sbjct: 57 --RHLLEDEYS-----VEGQLRAEVTLNIKRLQDIGCYRGIRHRKGLPVRGQRSRTNAR 108
>gi|338811103|ref|ZP_08623339.1| 30S ribosomal protein S13 [Acetonema longum DSM 6540]
gi|337276926|gb|EGO65327.1| 30S ribosomal protein S13 [Acetonema longum DSM 6540]
Length = 123
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 29/136 (21%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
+++ ALT I G G S +L K I + R + +EEEV K+ + + YK+ +
Sbjct: 13 KRIEIALTYIYGLGLTLSKEILAKTGISPDTRVRDLTEEEVAKLREAID--KNYKV-EGD 69
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
L R++ + +++RL +I ++RG RH GL VRGQ TKT
Sbjct: 70 LRREESL----------------------NIKRLIEIGSYRGKRHRAGLPVRGQKTKTNA 107
Query: 129 --RRG--RTVGVSKKK 140
R+G RTVGV +KK
Sbjct: 108 RTRKGPKRTVGVRRKK 123
>gi|307946309|ref|ZP_07661644.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4]
gi|307769973|gb|EFO29199.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4]
Length = 122
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 25/127 (19%)
Query: 3 TNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQY 62
NI ++V+ AL I G G +F+ +++K +ID +R E S+ EV I
Sbjct: 7 VNIPTNKRVIIALQYIHGIGAKFAQEIVEKNNIDAARRVNELSDAEVLSI---------- 56
Query: 63 KIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQ 122
++ +D Y ++ + D+ + +++RL + +RG+RH GL VRGQ
Sbjct: 57 ----------RETIDRDY---IVEGDLRRDTAM--NIKRLMDLGCYRGLRHRRGLPVRGQ 101
Query: 123 HTKTTGR 129
T T R
Sbjct: 102 RTHTNAR 108
>gi|261409495|ref|YP_003245736.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10]
gi|315649673|ref|ZP_07902757.1| 30S ribosomal protein S13 [Paenibacillus vortex V453]
gi|261285958|gb|ACX67929.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10]
gi|315274861|gb|EFU38237.1| 30S ribosomal protein S13 [Paenibacillus vortex V453]
Length = 122
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYKIPDWF 68
++V ALT I G G+ S VLK+ I+ + R + +E+EV K+
Sbjct: 13 KRVEIALTYIFGIGKTTSQKVLKETGINADTRVRDLTEDEVSKL---------------- 56
Query: 69 LNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTG 128
++ +DG ++ L ++ +++RL +I +RG+RH GL VRGQ TKT
Sbjct: 57 ----RETIDG-----MVKVEGDLRREISLNIKRLTEIGCYRGIRHRRGLPVRGQRTKTNA 107
Query: 129 R 129
R
Sbjct: 108 R 108
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,008,177,471
Number of Sequences: 23463169
Number of extensions: 73539370
Number of successful extensions: 200445
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2434
Number of HSP's successfully gapped in prelim test: 984
Number of HSP's that attempted gapping in prelim test: 195177
Number of HSP's gapped (non-prelim): 3840
length of query: 140
length of database: 8,064,228,071
effective HSP length: 104
effective length of query: 36
effective length of database: 9,919,025,791
effective search space: 357084928476
effective search space used: 357084928476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)