Your job contains 1 sequence.
>psy1365
MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR
QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRVR
GQHTKTTGRRGRTVGVSKKK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1365
(140 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010411 - symbol:RpS18 "Ribosomal protein S18" spe... 493 4.2e-47 1
ZFIN|ZDB-GENE-020419-20 - symbol:rps18 "ribosomal protein... 484 3.8e-46 1
UNIPROTKB|Q3T0R1 - symbol:RPS18 "40S ribosomal protein S1... 478 1.6e-45 1
UNIPROTKB|Q5TJE9 - symbol:RPS18 "40S ribosomal protein S1... 478 1.6e-45 1
UNIPROTKB|P62269 - symbol:RPS18 "40S ribosomal protein S1... 478 1.6e-45 1
UNIPROTKB|P62272 - symbol:RPS18 "40S ribosomal protein S1... 478 1.6e-45 1
UNIPROTKB|Q90YQ5 - symbol:rps18 "40S ribosomal protein S1... 478 1.6e-45 1
MGI|MGI:98146 - symbol:Rps18 "ribosomal protein S18" spec... 478 1.6e-45 1
RGD|3595 - symbol:Rps18 "ribosomal protein S18" species:1... 478 1.6e-45 1
UNIPROTKB|A7KIL2 - symbol:RPS18 "Ribosomal protein S18" s... 475 3.4e-45 1
RGD|2318487 - symbol:LOC100362298 "ribosomal protein S18-... 470 1.2e-44 1
RGD|1561919 - symbol:RGD1561919 "similar to ribosomal pro... 460 1.3e-43 1
TAIR|locus:2199670 - symbol:PFL "POINTED FIRST LEAVES" sp... 457 2.8e-43 1
TAIR|locus:2009066 - symbol:AT1G34030 species:3702 "Arabi... 457 2.8e-43 1
TAIR|locus:2005541 - symbol:RPS18C "S18 ribosomal protein... 457 2.8e-43 1
UNIPROTKB|G4MNZ8 - symbol:MGG_05661 "40S ribosomal protei... 454 5.7e-43 1
RGD|1562404 - symbol:RGD1562404 "similar to ribosomal pro... 452 9.3e-43 1
UNIPROTKB|Q8H588 - symbol:OJ1656_E11.108 "Putative riboso... 449 1.9e-42 1
UNIPROTKB|Q8H590 - symbol:OJ1656_E11.104 "Putative riboso... 449 1.9e-42 1
ASPGD|ASPL0000026438 - symbol:AN5441 species:162425 "Emer... 448 2.5e-42 1
UNIPROTKB|Q5B1Y9 - symbol:AN5441.2 "Ribosomal protein S13... 448 2.5e-42 1
WB|WBGene00004487 - symbol:rps-18 species:6239 "Caenorhab... 448 2.5e-42 1
UNIPROTKB|O18240 - symbol:rps-18 "Protein RPS-18" species... 448 2.5e-42 1
UNIPROTKB|Q7RXX0 - symbol:NCU00475 "40S ribosomal protein... 446 4.0e-42 1
UNIPROTKB|F1S4M2 - symbol:RPS18 "40S ribosomal protein S1... 442 1.1e-41 1
UNIPROTKB|A8HVP2 - symbol:RPS18 "Ribosomal protein S18" s... 433 9.6e-41 1
DICTYBASE|DDB_G0276415 - symbol:rps18 "40S ribosomal prot... 424 8.7e-40 1
UNIPROTKB|Q756F0 - symbol:AER315C "AER315Cp" species:2848... 407 5.5e-38 1
SGD|S000002858 - symbol:RPS18A "Protein component of the ... 407 5.5e-38 1
SGD|S000004488 - symbol:RPS18B "Protein component of the ... 407 5.5e-38 1
POMBASE|SPBC16D10.11c - symbol:rps1801 "40S ribosomal pro... 403 1.5e-37 1
POMBASE|SPCC1259.01c - symbol:rps1802 "40S ribosomal prot... 403 1.5e-37 1
MGI|MGI:3645266 - symbol:Gm5321 "predicted gene 5321" spe... 401 2.4e-37 1
UNIPROTKB|Q7R7S0 - symbol:PY07508 "Ribosomal protein S13/... 389 4.4e-36 1
GENEDB_PFALCIPARUM|PF11_0272 - symbol:PF11_0272 "ribosoma... 386 9.2e-36 1
RGD|1565912 - symbol:RGD1565912 "similar to ribosomal pro... 328 1.3e-29 1
UNIPROTKB|F1M6D1 - symbol:F1M6D1 "Uncharacterized protein... 294 5.2e-26 1
UNIPROTKB|F1M2A2 - symbol:F1M2A2 "Uncharacterized protein... 282 9.7e-25 1
UNIPROTKB|J3JS69 - symbol:RPS18 "HCG1777176, isoform CRA_... 275 5.3e-24 1
UNIPROTKB|Q8TRR2 - symbol:rps13 "30S ribosomal protein S1... 214 1.6e-17 1
UNIPROTKB|P95986 - symbol:rps13 "30S ribosomal protein S1... 192 3.3e-15 1
UNIPROTKB|Q9X1I5 - symbol:rpsM "30S ribosomal protein S13... 94 4.2e-10 2
UNIPROTKB|Q9GT46 - symbol:IrpS18 "Ribosomal protein S18" ... 127 2.6e-08 1
UNIPROTKB|Q3KLI8 - symbol:rpsM "30S ribosomal protein S13... 76 9.0e-06 2
TIGR_CMR|APH_0301 - symbol:APH_0301 "ribosomal protein S1... 79 9.4e-05 2
TIGR_CMR|CHY_2284 - symbol:CHY_2284 "ribosomal protein S1... 88 0.00035 1
UNIPROTKB|A9WH90 - symbol:rpsM "30S ribosomal protein S13... 87 0.00045 1
>FB|FBgn0010411 [details] [associations]
symbol:RpS18 "Ribosomal protein S18" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IBA;NAS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;NAS] [GO:0006412 "translation"
evidence=ISS;IBA;NAS] [GO:0006413 "translational initiation"
evidence=NAS] [GO:0005840 "ribosome" evidence=NAS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:AE013599 GO:GO:0005829 GO:GO:0005811 GO:GO:0006412
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 GO:GO:0000022
ChiTaRS:RPS18 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI KO:K02964
GeneTree:ENSGT00390000012691 CTD:6222 EMBL:L22959 EMBL:AY118434
EMBL:BT024929 RefSeq:NP_476964.1 RefSeq:NP_725943.1
UniGene:Dm.20558 ProteinModelPortal:P41094 SMR:P41094
DIP:DIP-21027N STRING:P41094 PaxDb:P41094 PRIDE:P41094
EnsemblMetazoa:FBtr0086273 EnsemblMetazoa:FBtr0086274 GeneID:37292
KEGG:dme:Dmel_CG8900 FlyBase:FBgn0010411 InParanoid:P41094
OrthoDB:EOG49GJ00 PhylomeDB:P41094 GenomeRNAi:37292 NextBio:802956
Bgee:P41094 GermOnline:CG8900 Uniprot:P41094
Length = 152
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 93/119 (78%), Positives = 109/119 (91%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDGKRKV A+TAIKG GRR+SNIVLKKAD+DL KRAGEC+EEEVDK++TI++NP
Sbjct: 16 MNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPL 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYK+P+WFLNRQKDI+DGKY Q LTS+ LDSKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 76 QYKVPNWFLNRQKDIIDGKYWQ--LTSS-NLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131
>ZFIN|ZDB-GENE-020419-20 [details] [associations]
symbol:rps18 "ribosomal protein S18" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IBA] [GO:0006412
"translation" evidence=IEA;IBA] [GO:0015935 "small ribosomal
subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IMP]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
ZFIN:ZDB-GENE-020419-20 GO:GO:0007275 GO:GO:0005829 GO:GO:0006412
GO:GO:0042254 GO:GO:0051726 GO:GO:0003735 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HAMAP:MF_01315
PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 CTD:6222 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:AY099517 EMBL:BC062289 EMBL:AF210641
IPI:IPI00490073 RefSeq:NP_775341.1 UniGene:Dr.76001
ProteinModelPortal:Q8JGS9 SMR:Q8JGS9 STRING:Q8JGS9 PRIDE:Q8JGS9
Ensembl:ENSDART00000017975 GeneID:192300 KEGG:dre:192300
InParanoid:Q8JGS9 NextBio:20797141 ArrayExpress:Q8JGS9 Bgee:Q8JGS9
Uniprot:Q8JGS9
Length = 152
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 88/119 (73%), Positives = 108/119 (90%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDLNKRAGE +E+EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKDI DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDIKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>UNIPROTKB|Q3T0R1 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9913 "Bos
taurus" [GO:0015935 "small ribosomal subunit" evidence=ISS;IBA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 GO:GO:0022627
SUPFAM:SSF46946 eggNOG:COG0099 HAMAP:MF_01315 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 EMBL:BC102293 IPI:IPI00689850
RefSeq:NP_001028786.1 UniGene:Bt.15275 ProteinModelPortal:Q3T0R1
SMR:Q3T0R1 STRING:Q3T0R1 PRIDE:Q3T0R1 Ensembl:ENSBTAT00000003431
GeneID:326602 KEGG:bta:326602 CTD:6222 HOVERGEN:HBG000200
InParanoid:Q3T0R1 OrthoDB:EOG4KSPM2 NextBio:20809664
ArrayExpress:Q3T0R1 Uniprot:Q3T0R1
Length = 152
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 87/119 (73%), Positives = 107/119 (89%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>UNIPROTKB|Q5TJE9 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9615
"Canis lupus familiaris" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS;IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AJ630366 GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 PDB:2ZKQ PDBsum:2ZKQ OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 GeneTree:ENSGT00390000012691
CTD:6222 HOVERGEN:HBG000200 OrthoDB:EOG4KSPM2 RefSeq:NP_001041547.1
UniGene:Cfa.6430 ProteinModelPortal:Q5TJE9 SMR:Q5TJE9 STRING:Q5TJE9
PRIDE:Q5TJE9 Ensembl:ENSCAFT00000001473 GeneID:403685
KEGG:cfa:403685 InParanoid:Q5TJE9 EvolutionaryTrace:Q5TJE9
NextBio:20817189 Uniprot:Q5TJE9
Length = 152
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 87/119 (73%), Positives = 107/119 (89%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>UNIPROTKB|P62269 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA;TAS] [GO:0006412 "translation"
evidence=IC;IBA;TAS] [GO:0015935 "small ribosomal subunit"
evidence=IDA;IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005840
"ribosome" evidence=NAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
Reactome:REACT_116125 EMBL:CH471081 GO:GO:0000184 GO:GO:0006413
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 EMBL:AL031228
EMBL:AL645940 EMBL:AL844527 EMBL:AL662827 EMBL:AL662820
EMBL:CR759817 EMBL:CR759786 GO:GO:0006415 EMBL:AL713971
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 SUPFAM:SSF46946
GO:GO:0006614 GO:GO:0019083 eggNOG:COG0099 HAMAP:MF_01315
PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
CTD:6222 HOVERGEN:HBG000200 OrthoDB:EOG4KSPM2 EMBL:X69150
EMBL:BC101786 EMBL:BC101788 EMBL:BC106063 IPI:IPI00013296
PIR:S30393 RefSeq:NP_072045.1 UniGene:Hs.448854 UniGene:Hs.627414
ProteinModelPortal:P62269 SMR:P62269 IntAct:P62269
MINT:MINT-1151113 STRING:P62269 PhosphoSite:P62269 DMDM:50403625
PaxDb:P62269 PeptideAtlas:P62269 PRIDE:P62269
Ensembl:ENST00000211372 Ensembl:ENST00000434122
Ensembl:ENST00000439602 Ensembl:ENST00000454021
Ensembl:ENST00000457341 GeneID:6222 KEGG:hsa:6222 UCSC:uc003odp.1
GeneCards:GC06P033240 HGNC:HGNC:10401 HPA:HPA050159 MIM:180473
neXtProt:NX_P62269 PharmGKB:PA34801 InParanoid:P62269
PhylomeDB:P62269 GenomeRNAi:6222 NextBio:24155 ArrayExpress:P62269
Bgee:P62269 CleanEx:HS_RPS18 Genevestigator:P62269
GermOnline:ENSG00000182498 Uniprot:P62269
Length = 152
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 87/119 (73%), Positives = 107/119 (89%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>UNIPROTKB|P62272 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099 HAMAP:MF_01315
PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 CTD:6222 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:AB000911 RefSeq:NP_999105.1
UniGene:Ssc.53782 ProteinModelPortal:P62272 SMR:P62272
STRING:P62272 PRIDE:P62272 Ensembl:ENSSSCT00000001675 GeneID:396980
KEGG:ssc:396980 Uniprot:P62272
Length = 152
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 87/119 (73%), Positives = 107/119 (89%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>UNIPROTKB|Q90YQ5 [details] [associations]
symbol:rps18 "40S ribosomal protein S18" species:7998
"Ictalurus punctatus" [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022627 SUPFAM:SSF46946 HAMAP:MF_01315 PANTHER:PTHR10871
HOVERGEN:HBG000200 EMBL:AF402827 RefSeq:NP_001187081.1
UniGene:Ipu.133 ProteinModelPortal:Q90YQ5 SMR:Q90YQ5 PRIDE:Q90YQ5
GeneID:100304570 Uniprot:Q90YQ5
Length = 152
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 86/119 (72%), Positives = 108/119 (90%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +E+EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>MGI|MGI:98146 [details] [associations]
symbol:Rps18 "ribosomal protein S18" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=ISO;IBA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IBA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 MGI:MGI:98146
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735
GO:GO:0019843 EMBL:AF110520 EMBL:AF100956 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 HAMAP:MF_01315 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964 CTD:6222
HOVERGEN:HBG000200 OrthoDB:EOG4KSPM2 EMBL:M76763 EMBL:M76762
EMBL:AK050626 EMBL:BC081459 EMBL:BC081458 IPI:IPI00317590
PIR:I76666 RefSeq:NP_035426.1 UniGene:Mm.298745 UniGene:Mm.324762
UniGene:Mm.440079 ProteinModelPortal:P62270 SMR:P62270
IntAct:P62270 STRING:P62270 PhosphoSite:P62270 PaxDb:P62270
PRIDE:P62270 Ensembl:ENSMUST00000008812 GeneID:20084 KEGG:mmu:20084
InParanoid:P62270 NextBio:297575 Bgee:P62270 CleanEx:MM_RPS18
Genevestigator:P62270 GermOnline:ENSMUSG00000008668 Uniprot:P62270
Length = 152
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 87/119 (73%), Positives = 107/119 (89%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>RGD|3595 [details] [associations]
symbol:Rps18 "ribosomal protein S18" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IBA;TAS] [GO:0006412 "translation" evidence=IBA] [GO:0006417
"regulation of translation" evidence=NAS] [GO:0015935 "small
ribosomal subunit" evidence=ISO;TAS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 RGD:3595
GO:GO:0006417 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:BX883042 GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877
KO:K02964 GeneTree:ENSGT00390000012691 CTD:6222 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:X57529 EMBL:BC126072 IPI:IPI00188058
PIR:JH0419 RefSeq:NP_998722.1 RefSeq:XP_002724624.1
RefSeq:XP_002727879.1 UniGene:Rn.199092 UniGene:Rn.42766
ProteinModelPortal:P62271 SMR:P62271 IntAct:P62271 STRING:P62271
PRIDE:P62271 Ensembl:ENSRNOT00000037499 Ensembl:ENSRNOT00000046010
GeneID:100360679 GeneID:294282 KEGG:rno:100360679 KEGG:rno:294282
UCSC:RGD:3595 InParanoid:P62271 NextBio:637886 Genevestigator:P62271
GermOnline:ENSRNOG00000033152 Uniprot:P62271
Length = 152
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 87/119 (73%), Positives = 107/119 (89%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>UNIPROTKB|A7KIL2 [details] [associations]
symbol:RPS18 "Ribosomal protein S18" species:8030 "Salmo
salar" [GO:0015935 "small ribosomal subunit" evidence=ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0022627
SUPFAM:SSF46946 PANTHER:PTHR10871 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:EF427383 EMBL:BT043500 EMBL:BT047156
EMBL:BT047683 EMBL:BT049532 EMBL:BT050180 EMBL:BT058115
EMBL:BT058207 EMBL:BT059815 EMBL:BT059907 EMBL:GQ505858
EMBL:GQ505859 ProteinModelPortal:A7KIL2 SMR:A7KIL2 Uniprot:A7KIL2
Length = 152
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 85/119 (71%), Positives = 108/119 (90%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL+KRAGE +++EV++++TIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>RGD|2318487 [details] [associations]
symbol:LOC100362298 "ribosomal protein S18-like" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 RGD:2318487 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 OMA:IKYIVRI OrthoDB:EOG4KSPM2
IPI:IPI00387914 RefSeq:XP_002729551.1 Ensembl:ENSRNOT00000048495
GeneID:100362298 KEGG:rno:100362298 UCSC:RGD:2318487 Uniprot:D3ZM33
Length = 152
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 86/119 (72%), Positives = 106/119 (89%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+RK+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ D KYSQ+L LD+KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDRKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFWGLRV 131
>RGD|1561919 [details] [associations]
symbol:RGD1561919 "similar to ribosomal protein S18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 RGD:1561919 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 OrthoDB:EOG4KSPM2 IPI:IPI00197271
RefSeq:XP_226269.1 Ensembl:ENSRNOT00000047417 GeneID:307665
KEGG:rno:307665 UCSC:RGD:1561919 CTD:307665 NextBio:657735
Uniprot:D3ZAU6
Length = 152
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 84/119 (70%), Positives = 105/119 (88%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
+ TN+DG+RK+ A+TAIKG G R++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LDTNVDGQRKIALAITAIKGVGWRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L S LD+KLREDLER+KKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDMKDGKYSQVLANS---LDNKLREDLERVKKIRAHRGLRHFWGLRV 131
>TAIR|locus:2199670 [details] [associations]
symbol:PFL "POINTED FIRST LEAVES" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0006413 "translational initiation" evidence=TAS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 GO:GO:0005618 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005730 GO:GO:0006413 GO:GO:0042254 GO:GO:0003735
GO:GO:0019843 EMBL:AL161515 EMBL:AL049482 GO:GO:0022627
SUPFAM:SSF46946 EMBL:AC003979 EMBL:Y12227 EMBL:AC015446
EMBL:AC079286 eggNOG:COG0099 PANTHER:PTHR10871 HOGENOM:HOG000039877
KO:K02964 EMBL:Z23165 EMBL:Z28701 EMBL:Z28702 EMBL:Z28962
EMBL:AF411781 EMBL:AF386941 EMBL:AF370463 EMBL:AY034965
EMBL:AY064680 EMBL:AY070029 EMBL:AY086334 EMBL:AY086800
EMBL:BT006539 EMBL:AY087428 IPI:IPI00532609 PIR:S46223
RefSeq:NP_173692.1 RefSeq:NP_192718.1 RefSeq:NP_564434.1
UniGene:At.179 UniGene:At.180 UniGene:At.20392 UniGene:At.33672
ProteinModelPortal:P34788 SMR:P34788 IntAct:P34788 STRING:P34788
PaxDb:P34788 PRIDE:P34788 EnsemblPlants:AT1G22780.1
EnsemblPlants:AT1G34030.1 EnsemblPlants:AT4G09800.1 GeneID:826569
GeneID:838884 GeneID:840300 KEGG:ath:AT1G22780 KEGG:ath:AT1G34030
KEGG:ath:AT4G09800 GeneFarm:799 GeneFarm:800 GeneFarm:802
TAIR:At1g22780 TAIR:At1g34030 TAIR:At4g09800 InParanoid:P34788
OMA:IKYIVRI PhylomeDB:P34788 ProtClustDB:CLSN2681852
Genevestigator:P34788 GermOnline:AT1G22780 Uniprot:P34788
Length = 152
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 85/119 (71%), Positives = 103/119 (86%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRR +NIV KKAD+D+NKRAGE S E+D ++TI+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Q+KIPDWFLNRQKD DGKYSQ++ S A LD KLR+DLERLKKIR HRG+RHYWGLRV
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV--SNA-LDMKLRDDLERLKKIRNHRGLRHYWGLRV 131
>TAIR|locus:2009066 [details] [associations]
symbol:AT1G34030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005774
GO:GO:0005618 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0006413 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AL161515 EMBL:AL049482 GO:GO:0022627 SUPFAM:SSF46946
EMBL:AC003979 EMBL:Y12227 EMBL:AC015446 EMBL:AC079286
eggNOG:COG0099 PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964
EMBL:Z23165 EMBL:Z28701 EMBL:Z28702 EMBL:Z28962 EMBL:AF411781
EMBL:AF386941 EMBL:AF370463 EMBL:AY034965 EMBL:AY064680
EMBL:AY070029 EMBL:AY086334 EMBL:AY086800 EMBL:BT006539
EMBL:AY087428 IPI:IPI00532609 PIR:S46223 RefSeq:NP_173692.1
RefSeq:NP_192718.1 RefSeq:NP_564434.1 UniGene:At.179 UniGene:At.180
UniGene:At.20392 UniGene:At.33672 ProteinModelPortal:P34788
SMR:P34788 IntAct:P34788 STRING:P34788 PaxDb:P34788 PRIDE:P34788
EnsemblPlants:AT1G22780.1 EnsemblPlants:AT1G34030.1
EnsemblPlants:AT4G09800.1 GeneID:826569 GeneID:838884 GeneID:840300
KEGG:ath:AT1G22780 KEGG:ath:AT1G34030 KEGG:ath:AT4G09800
GeneFarm:799 GeneFarm:800 GeneFarm:802 TAIR:At1g22780
TAIR:At1g34030 TAIR:At4g09800 InParanoid:P34788 OMA:IKYIVRI
PhylomeDB:P34788 ProtClustDB:CLSN2681852 Genevestigator:P34788
GermOnline:AT1G22780 Uniprot:P34788
Length = 152
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 85/119 (71%), Positives = 103/119 (86%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRR +NIV KKAD+D+NKRAGE S E+D ++TI+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Q+KIPDWFLNRQKD DGKYSQ++ S A LD KLR+DLERLKKIR HRG+RHYWGLRV
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV--SNA-LDMKLRDDLERLKKIRNHRGLRHYWGLRV 131
>TAIR|locus:2005541 [details] [associations]
symbol:RPS18C "S18 ribosomal protein" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0015935 "small ribosomal subunit"
evidence=ISS;TAS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0009506 GO:GO:0005774 GO:GO:0005618
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0006413
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 EMBL:AL161515
EMBL:AL049482 GO:GO:0022627 SUPFAM:SSF46946 EMBL:AC003979
EMBL:Y12227 EMBL:AC015446 EMBL:AC079286 eggNOG:COG0099
PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964 EMBL:Z23165
EMBL:Z28701 EMBL:Z28702 EMBL:Z28962 EMBL:AF411781 EMBL:AF386941
EMBL:AF370463 EMBL:AY034965 EMBL:AY064680 EMBL:AY070029
EMBL:AY086334 EMBL:AY086800 EMBL:BT006539 EMBL:AY087428
IPI:IPI00532609 PIR:S46223 RefSeq:NP_173692.1 RefSeq:NP_192718.1
RefSeq:NP_564434.1 UniGene:At.179 UniGene:At.180 UniGene:At.20392
UniGene:At.33672 ProteinModelPortal:P34788 SMR:P34788 IntAct:P34788
STRING:P34788 PaxDb:P34788 PRIDE:P34788 EnsemblPlants:AT1G22780.1
EnsemblPlants:AT1G34030.1 EnsemblPlants:AT4G09800.1 GeneID:826569
GeneID:838884 GeneID:840300 KEGG:ath:AT1G22780 KEGG:ath:AT1G34030
KEGG:ath:AT4G09800 GeneFarm:799 GeneFarm:800 GeneFarm:802
TAIR:At1g22780 TAIR:At1g34030 TAIR:At4g09800 InParanoid:P34788
OMA:IKYIVRI PhylomeDB:P34788 ProtClustDB:CLSN2681852
Genevestigator:P34788 GermOnline:AT1G22780 Uniprot:P34788
Length = 152
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 85/119 (71%), Positives = 103/119 (86%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRR +NIV KKAD+D+NKRAGE S E+D ++TI+ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Q+KIPDWFLNRQKD DGKYSQ++ S A LD KLR+DLERLKKIR HRG+RHYWGLRV
Sbjct: 76 QFKIPDWFLNRQKDYKDGKYSQVV--SNA-LDMKLRDDLERLKKIRNHRGLRHYWGLRV 131
>UNIPROTKB|G4MNZ8 [details] [associations]
symbol:MGG_05661 "40S ribosomal protein S18" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 SUPFAM:SSF46946
PANTHER:PTHR10871 KO:K02964 RefSeq:XP_003710559.1
ProteinModelPortal:G4MNZ8 SMR:G4MNZ8 EnsemblFungi:MGG_05661T0
GeneID:2676017 KEGG:mgr:MGG_05661 Uniprot:G4MNZ8
Length = 156
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 82/119 (68%), Positives = 104/119 (87%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+++ALT IKG GRR+SN+V+KKAD+DLNKRAGE + EE+++++TI+ NP
Sbjct: 18 LNTNVDGKQKIVYALTKIKGVGRRYSNLVVKKADVDLNKRAGELTSEELERVVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIP WFLNRQ+DIVDGK SQ L +DSKLR+DLERLKKIRAHRG+RHYWGLRV
Sbjct: 78 QYKIPSWFLNRQRDIVDGKDSQTLANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRV 133
>RGD|1562404 [details] [associations]
symbol:RGD1562404 "similar to ribosomal protein S18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 RGD:1562404 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 OrthoDB:EOG4KSPM2 IPI:IPI00214217
RefSeq:XP_001058023.1 RefSeq:XP_234780.1 PRIDE:D3ZII2
Ensembl:ENSRNOT00000051652 GeneID:314556 KEGG:rno:314556
UCSC:RGD:1562404 CTD:314556 OMA:HFWDLRV NextBio:667837
Uniprot:D3ZII2
Length = 152
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 83/119 (69%), Positives = 104/119 (87%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG+ K+ FA+TAIKG GRR++++VL+KADIDL KRAGE +E+EV+++ITIM NPR
Sbjct: 16 LNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFL+RQKD+ DGKYSQ+L LD+KL EDLERLKKIRAHRG+RH+W LRV
Sbjct: 76 QYKIPDWFLDRQKDVKDGKYSQVLAKG---LDNKLHEDLERLKKIRAHRGLRHFWDLRV 131
>UNIPROTKB|Q8H588 [details] [associations]
symbol:OJ1656_E11.108 "Putative ribosomal protein S18"
species:39947 "Oryza sativa Japonica Group" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005773 GO:GO:0005730 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 EMBL:CM000144 GO:GO:0022627
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871 EMBL:AP003843
EMBL:AP004670 STRING:Q8H588 Uniprot:Q8H588
Length = 148
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 81/119 (68%), Positives = 105/119 (88%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRFSNI KKADID+NKRAGE + EE+++++T++ NPR
Sbjct: 12 LNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELERLMTVVANPR 71
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Q+K+PDWFLNR+KD DG++SQ++ S A LD KLR+DLERLKKIR HRG+RHYWGLRV
Sbjct: 72 QFKVPDWFLNRKKDYKDGRFSQVV--SNA-LDMKLRDDLERLKKIRNHRGLRHYWGLRV 127
>UNIPROTKB|Q8H590 [details] [associations]
symbol:OJ1656_E11.104 "Putative ribosomal protein S18A"
species:39947 "Oryza sativa Japonica Group" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005773 GO:GO:0005730 GO:GO:0006412 GO:GO:0042254
EMBL:DP000009 EMBL:AP008209 GO:GO:0003723 GO:GO:0003735
EMBL:AP008213 EMBL:CM000144 GO:GO:0022627 SUPFAM:SSF46946
GO:GO:0015935 PANTHER:PTHR10871 KO:K02964 OMA:IKYIVRI
ProtClustDB:CLSN2681852 EMBL:AP003843 EMBL:AP004670 EMBL:AC090871
EMBL:AC092076 EMBL:AK058881 EMBL:AK059548 RefSeq:NP_001051541.1
RefSeq:NP_001059007.2 UniGene:Os.13842 UniGene:Os.88187
STRING:Q8H590 EnsemblPlants:LOC_Os03g58050.1
EnsemblPlants:LOC_Os07g07709.1 GeneID:4334407 GeneID:4342526
KEGG:osa:4334407 KEGG:osa:4342526 Uniprot:Q8H590
Length = 152
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 81/119 (68%), Positives = 105/119 (88%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+K+MFALT+IKG GRRFSNI KKADID+NKRAGE + EE+++++T++ NPR
Sbjct: 16 LNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELTPEELERLMTVVANPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Q+K+PDWFLNR+KD DG++SQ++ S A LD KLR+DLERLKKIR HRG+RHYWGLRV
Sbjct: 76 QFKVPDWFLNRKKDYKDGRFSQVV--SNA-LDMKLRDDLERLKKIRNHRGLRHYWGLRV 131
>ASPGD|ASPL0000026438 [details] [associations]
symbol:AN5441 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006407 "rRNA export from
nucleus" evidence=IEA] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 EMBL:BN001305 GO:GO:0003735 EMBL:AACD01000094
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964 OrthoDB:EOG437VQ7
RefSeq:XP_663045.1 ProteinModelPortal:Q5B1Y9 SMR:Q5B1Y9
STRING:Q5B1Y9 EnsemblFungi:CADANIAT00003648 GeneID:2871718
KEGG:ani:AN5441.2 Uniprot:Q5B1Y9
Length = 155
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 82/119 (68%), Positives = 101/119 (84%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK K+M+ALT +KG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKEKIMYALTQVKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIP WFLNRQ+DIVDGK Q+L LDSK REDLERLKKIR+HRG+RHYWGLRV
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDYQVLSNG---LDSKYREDLERLKKIRSHRGLRHYWGLRV 133
>UNIPROTKB|Q5B1Y9 [details] [associations]
symbol:AN5441.2 "Ribosomal protein S13p/S18e
(AFU_orthologue; AFUA_6G13550)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
EMBL:BN001305 GO:GO:0003735 EMBL:AACD01000094 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 OrthoDB:EOG437VQ7 RefSeq:XP_663045.1
ProteinModelPortal:Q5B1Y9 SMR:Q5B1Y9 STRING:Q5B1Y9
EnsemblFungi:CADANIAT00003648 GeneID:2871718 KEGG:ani:AN5441.2
Uniprot:Q5B1Y9
Length = 155
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 82/119 (68%), Positives = 101/119 (84%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK K+M+ALT +KG GRR+SN+V KKAD+DLNKRAGE + EE+++I+TI+ NP
Sbjct: 18 LNTNVDGKEKIMYALTQVKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTILQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIP WFLNRQ+DIVDGK Q+L LDSK REDLERLKKIR+HRG+RHYWGLRV
Sbjct: 78 QYKIPTWFLNRQRDIVDGKDYQVLSNG---LDSKYREDLERLKKIRSHRGLRHYWGLRV 133
>WB|WBGene00004487 [details] [associations]
symbol:rps-18 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006898 GO:GO:0006412
EMBL:Z99281 GO:GO:0000003 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 PIR:T27228 RefSeq:NP_502794.1
ProteinModelPortal:O18240 SMR:O18240 DIP:DIP-25985N
MINT:MINT-1089736 STRING:O18240 PaxDb:O18240
EnsemblMetazoa:Y57G11C.16.1 EnsemblMetazoa:Y57G11C.16.2
GeneID:178408 KEGG:cel:CELE_Y57G11C.16 UCSC:Y57G11C.16.1 CTD:178408
WormBase:Y57G11C.16 InParanoid:O18240 NextBio:901012 Uniprot:O18240
Length = 154
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 86/119 (72%), Positives = 102/119 (85%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG RKV +ALTAIKG GRRF+ + +KAD+D+NKRAGE +EE+ DKI+TIM NP
Sbjct: 16 MNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELTEEDFDKIVTIMQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIP+WFLNRQKDI DGK Q+L STA +D+KLREDLER+KKIR HRG+RHYWGLRV
Sbjct: 76 QYKIPNWFLNRQKDIKDGKTGQLL--STA-VDNKLREDLERMKKIRLHRGLRHYWGLRV 131
>UNIPROTKB|O18240 [details] [associations]
symbol:rps-18 "Protein RPS-18" species:6239 "Caenorhabditis
elegans" [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006898 GO:GO:0006412 EMBL:Z99281 GO:GO:0000003
GO:GO:0042254 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 GeneTree:ENSGT00390000012691
PIR:T27228 RefSeq:NP_502794.1 ProteinModelPortal:O18240 SMR:O18240
DIP:DIP-25985N MINT:MINT-1089736 STRING:O18240 PaxDb:O18240
EnsemblMetazoa:Y57G11C.16.1 EnsemblMetazoa:Y57G11C.16.2
GeneID:178408 KEGG:cel:CELE_Y57G11C.16 UCSC:Y57G11C.16.1 CTD:178408
WormBase:Y57G11C.16 InParanoid:O18240 NextBio:901012 Uniprot:O18240
Length = 154
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 86/119 (72%), Positives = 102/119 (85%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+TNIDG RKV +ALTAIKG GRRF+ + +KAD+D+NKRAGE +EE+ DKI+TIM NP
Sbjct: 16 MNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELTEEDFDKIVTIMQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIP+WFLNRQKDI DGK Q+L STA +D+KLREDLER+KKIR HRG+RHYWGLRV
Sbjct: 76 QYKIPNWFLNRQKDIKDGKTGQLL--STA-VDNKLREDLERMKKIRLHRGLRHYWGLRV 131
>UNIPROTKB|Q7RXX0 [details] [associations]
symbol:NCU00475 "40S ribosomal protein S18" species:367110
"Neurospora crassa OR74A" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935
eggNOG:COG0099 PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964
OrthoDB:EOG437VQ7 EMBL:AABX02000001 RefSeq:XP_956794.2
UniGene:Ncr.4507 ProteinModelPortal:Q7RXX0 SMR:Q7RXX0 STRING:Q7RXX0
EnsemblFungi:EFNCRT00000000145 GeneID:3872941 KEGG:ncr:NCU00475
Uniprot:Q7RXX0
Length = 156
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 83/119 (69%), Positives = 103/119 (86%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK+KV+++LT IKG GRR+SN+V KKAD+DL+KRAGE + EE+++I+TIM NP
Sbjct: 18 LNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLSKRAGELTSEELERIVTIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
YKIP WFLNRQ+DIVDGK SQIL +DSKLR+DLERLKKIRAHRG+RHYWGLRV
Sbjct: 78 AYKIPAWFLNRQRDIVDGKDSQILANG---VDSKLRDDLERLKKIRAHRGLRHYWGLRV 133
>UNIPROTKB|F1S4M2 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 EMBL:CU655822
Ensembl:ENSSSCT00000009592 OMA:ATTAIKG Uniprot:F1S4M2
Length = 152
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 82/119 (68%), Positives = 101/119 (84%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++T IDG +K+ FA TAIKG GRR++++VL+KADIDL KRAGE +E+EV+ +ITIM NP
Sbjct: 16 LNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPG 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKYSQ+L LD+KL ED+ERLKKIRAHRG+RH+WGLRV
Sbjct: 76 QYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLHEDVERLKKIRAHRGLRHFWGLRV 131
>UNIPROTKB|A8HVP2 [details] [associations]
symbol:RPS18 "Ribosomal protein S18" species:3055
"Chlamydomonas reinhardtii" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005773 GO:GO:0005730 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 GO:GO:0022626 EMBL:DS496110
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871 KO:K02964
ProtClustDB:CLSN2681852 RefSeq:XP_001696472.1 UniGene:Cre.8169
ProteinModelPortal:A8HVP2 SMR:A8HVP2 STRING:A8HVP2 PRIDE:A8HVP2
EnsemblPlants:EDP08449 GeneID:5721802 KEGG:cre:CHLREDRAFT_155649
Uniprot:A8HVP2
Length = 153
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 79/119 (66%), Positives = 103/119 (86%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK K+M+A+TAI+G GRRFSN+V KKA++DL KRAGECS +E+++++ I+ NPR
Sbjct: 17 LNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIVANPR 76
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
YKIPDWFLNRQKD G++SQ LTS+ QLD+ +R+DLERLKKIR HRG+RHYWGLRV
Sbjct: 77 AYKIPDWFLNRQKDHKTGRFSQ--LTSS-QLDTVMRDDLERLKKIRNHRGLRHYWGLRV 132
>DICTYBASE|DDB_G0276415 [details] [associations]
symbol:rps18 "40S ribosomal protein S18"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS;IBA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS;IBA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 dictyBase:DDB_G0276415 GO:GO:0005829 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AAFI02000015 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI KO:K02964
RefSeq:XP_643120.1 ProteinModelPortal:Q869U7 SMR:Q869U7
STRING:Q869U7 PRIDE:Q869U7 EnsemblProtists:DDB0231058
GeneID:8620525 KEGG:ddi:DDB_G0276415 ProtClustDB:PTZ00134
Uniprot:Q869U7
Length = 154
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 79/118 (66%), Positives = 98/118 (83%)
Query: 2 STNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQ 61
+TN+DG+RK+ +ALT +KG GRRF+N+V KKADID +KRAGE S++EV+++ TIM +PRQ
Sbjct: 19 NTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIMNHPRQ 78
Query: 62 YKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Y IP WFLNRQKDI DGKYS L Q+D K REDLERLKKIRAHRG+RH++GLRV
Sbjct: 79 YNIPTWFLNRQKDIKDGKYSHCLAN---QIDVKFREDLERLKKIRAHRGVRHHFGLRV 133
>UNIPROTKB|Q756F0 [details] [associations]
symbol:AER315C "AER315Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0003735 EMBL:AE016818 GenomeReviews:AE016818_GR
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 OrthoDB:EOG437VQ7 RefSeq:NP_985171.1
ProteinModelPortal:Q756F0 SMR:Q756F0 STRING:Q756F0
EnsemblFungi:AAS52995 GeneID:4621384 KEGG:ago:AGOS_AER315C
PhylomeDB:Q756F0 Uniprot:Q756F0
Length = 146
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 73/119 (61%), Positives = 98/119 (82%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT I+G GRR++N++ KKAD+DLNKRAGE ++EE+++++ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIRGVGRRYANLICKKADVDLNKRAGELTQEELERVVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
YKIP WFLNRQKD+ DGK L + L+SKLR+DLERLKKIRAHRG+RH+WGLRV
Sbjct: 78 HYKIPAWFLNRQKDVNDGKDYHSLANN---LESKLRDDLERLKKIRAHRGIRHFWGLRV 133
>SGD|S000002858 [details] [associations]
symbol:RPS18A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=NAS;IBA] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0006407 "rRNA export from nucleus" evidence=IGI]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;NAS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 SGD:S000002858 EMBL:U33007 GO:GO:0005739
EMBL:BK006938 GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0000447 PDB:1S1H PDBsum:1S1H GO:GO:0022627 SUPFAM:SSF46946
PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB
PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C PDBsum:3U5G GO:GO:0006407
HAMAP:MF_01315 PANTHER:PTHR10871 PDB:1K5X PDBsum:1K5X PIR:S50886
RefSeq:NP_010738.1 RefSeq:NP_013686.1 ProteinModelPortal:P0CX55
SMR:P0CX55 EnsemblFungi:YDR450W EnsemblFungi:YML026C GeneID:852061
GeneID:854982 KEGG:sce:YDR450W KEGG:sce:YML026C KO:K02964
EvolutionaryTrace:P0CX55 NextBio:970337 ArrayExpress:P0CX55
GermOnline:YDR450W Uniprot:P0CX55
Length = 146
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 75/119 (63%), Positives = 97/119 (81%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
YKIP WFLNRQ DI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRV
Sbjct: 78 HYKIPAWFLNRQNDITDGKDYHTLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRV 133
>SGD|S000004488 [details] [associations]
symbol:RPS18B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0006407 "rRNA
export from nucleus" evidence=IGI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;NAS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IBA;NAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 SGD:S000004488
GO:GO:0005739 EMBL:BK006946 GO:GO:0003735 GO:GO:0002181 EMBL:Z46659
GO:GO:0019843 GO:GO:0000447 GO:GO:0022627 SUPFAM:SSF46946
GO:GO:0006407 HAMAP:MF_01315 PANTHER:PTHR10871 PIR:S50886
RefSeq:NP_010738.1 RefSeq:NP_013686.1 EnsemblFungi:YDR450W
EnsemblFungi:YML026C GeneID:852061 GeneID:854982 KEGG:sce:YDR450W
KEGG:sce:YML026C KO:K02964 NextBio:970337 EMBL:X62392
ProteinModelPortal:P0CX56 SMR:P0CX56 GeneTree:ENSGT00390000012691
ArrayExpress:P0CX56 GermOnline:YML026C Uniprot:P0CX56
Length = 146
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 75/119 (63%), Positives = 97/119 (81%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DG K+++ALT IKG GRR+SN+V KKAD+DL+KRAGE ++EE+++I+ IM NP
Sbjct: 18 LNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
YKIP WFLNRQ DI DGK L + ++SKLR+DLERLKKIRAHRG+RH+WGLRV
Sbjct: 78 HYKIPAWFLNRQNDITDGKDYHTLANN---VESKLRDDLERLKKIRAHRGIRHFWGLRV 133
>POMBASE|SPBC16D10.11c [details] [associations]
symbol:rps1801 "40S ribosomal protein S18 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=ISO] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
PomBase:SPBC16D10.11c PomBase:SPCC1259.01c GO:GO:0005739
GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877
KO:K02964 PIR:T39575 RefSeq:NP_588057.2 RefSeq:NP_596506.1
ProteinModelPortal:O94754 SMR:O94754 IntAct:O94754 STRING:O94754
PRIDE:O94754 EnsemblFungi:SPBC16D10.11c.1
EnsemblFungi:SPCC1259.01c.1 GeneID:2540180 GeneID:3361064
KEGG:spo:SPBC16D10.11c KEGG:spo:SPCC1259.01c OrthoDB:EOG437VQ7
NextBio:20801312 Uniprot:O94754
Length = 152
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 78/119 (65%), Positives = 98/119 (82%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KVMFA+T IKG GRR++NIV KKADID++KRAGE + EE+++I+TI+ NP
Sbjct: 16 LNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTIIQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Q+KIP WFLNRQKDI DGK Q+L + +DSKLREDLERLKKI+ HRG+RH LRV
Sbjct: 76 QFKIPSWFLNRQKDINDGKSFQLLANN---VDSKLREDLERLKKIQTHRGLRHALDLRV 131
>POMBASE|SPCC1259.01c [details] [associations]
symbol:rps1802 "40S ribosomal protein S18 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0019843 "rRNA binding" evidence=ISM] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 PomBase:SPBC16D10.11c PomBase:SPCC1259.01c
GO:GO:0005739 GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0022627 SUPFAM:SSF46946
eggNOG:COG0099 HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 PIR:T39575 RefSeq:NP_588057.2
RefSeq:NP_596506.1 ProteinModelPortal:O94754 SMR:O94754
IntAct:O94754 STRING:O94754 PRIDE:O94754
EnsemblFungi:SPBC16D10.11c.1 EnsemblFungi:SPCC1259.01c.1
GeneID:2540180 GeneID:3361064 KEGG:spo:SPBC16D10.11c
KEGG:spo:SPCC1259.01c OrthoDB:EOG437VQ7 NextBio:20801312
Uniprot:O94754
Length = 152
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 78/119 (65%), Positives = 98/119 (82%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KVMFA+T IKG GRR++NIV KKADID++KRAGE + EE+++I+TI+ NP
Sbjct: 16 LNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTIIQNPS 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Q+KIP WFLNRQKDI DGK Q+L + +DSKLREDLERLKKI+ HRG+RH LRV
Sbjct: 76 QFKIPSWFLNRQKDINDGKSFQLLANN---VDSKLREDLERLKKIQTHRGLRHALDLRV 131
>MGI|MGI:3645266 [details] [associations]
symbol:Gm5321 "predicted gene 5321" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS50159 MGI:MGI:3645266
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
HOGENOM:HOG000039877 OrthoDB:EOG4KSPM2 EMBL:AC026949
IPI:IPI00111248 ProteinModelPortal:D3YWV7 SMR:D3YWV7 PRIDE:D3YWV7
Ensembl:ENSMUST00000072050 NextBio:404664 Uniprot:D3YWV7
Length = 148
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 78/119 (65%), Positives = 96/119 (80%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNIDG +K+ FA+TAIKG GR ++++VL+KADIDL KRAGE +E +ITIM NP+
Sbjct: 16 LNTNIDGWQKIAFAITAIKGVGRSYAHVVLRKADIDLTKRAGELTE----CVITIMQNPQ 71
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QYKIPDWFLNRQKD+ DGKY Q+L LD+KLREDLE LKKIRAHRG+ H+WG RV
Sbjct: 72 QYKIPDWFLNRQKDVKDGKYRQVLANG---LDNKLREDLEWLKKIRAHRGLHHFWGHRV 127
>UNIPROTKB|Q7R7S0 [details] [associations]
symbol:PY07508 "Ribosomal protein S13/S18" species:73239
"Plasmodium yoelii yoelii" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935
eggNOG:COG0099 PANTHER:PTHR10871 KO:K02964 EMBL:AABL01002777
RefSeq:XP_728420.1 ProteinModelPortal:Q7R7S0 SMR:Q7R7S0
STRING:Q7R7S0 GeneID:3800630 KEGG:pyo:PY07508
EuPathDB:PlasmoDB:PY07508 Uniprot:Q7R7S0
Length = 156
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 71/119 (59%), Positives = 95/119 (79%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV ALTAIKG G+R +N++ K+A++D KRAGE + EE++ I+ IM++P
Sbjct: 18 LNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIMSSPS 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Q+KIPDWFLNR++DI DGK ++ QLDS LREDLER+KKIR HRG+RH+WGLRV
Sbjct: 78 QFKIPDWFLNRRRDIKDGKNLHVIAN---QLDSYLREDLERMKKIRLHRGLRHHWGLRV 133
>GENEDB_PFALCIPARUM|PF11_0272 [details] [associations]
symbol:PF11_0272 "ribosomal protein S18,
putative" species:5833 "Plasmodium falciparum" [GO:0015935 "small
ribosomal subunit" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 EMBL:AE014186
SUPFAM:SSF46946 PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877
KO:K02964 ProtClustDB:PTZ00134 RefSeq:XP_001347943.1
ProteinModelPortal:Q8IIA2 SMR:Q8IIA2 IntAct:Q8IIA2
MINT:MINT-1584243 PRIDE:Q8IIA2 EnsemblProtists:PF11_0272:mRNA
GeneID:810819 KEGG:pfa:PF11_0272 EuPathDB:PlasmoDB:PF3D7_1126200
Uniprot:Q8IIA2
Length = 156
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 70/119 (58%), Positives = 94/119 (78%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN+DGK KV+ ALTAIKG G+R + ++ K+A++D KRAGE + EE+D I+ IM+ P
Sbjct: 18 LNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGELTTEEIDNIVHIMSTPT 77
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
Q+KIPDWFLNR+KD+ +GK ++ QLDS LREDLER+KKIR HRG+RH+WGLRV
Sbjct: 78 QFKIPDWFLNRRKDLKEGKNIHVIAN---QLDSYLREDLERMKKIRLHRGLRHHWGLRV 133
>RGD|1565912 [details] [associations]
symbol:RGD1565912 "similar to ribosomal protein S18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 RGD:1565912 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 IPI:IPI00367215
Ensembl:ENSRNOT00000043909 UCSC:RGD:1565912 Uniprot:D4AA93
Length = 146
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 65/119 (54%), Positives = 91/119 (76%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TNID +++ FA+TA KG +R++++VL+KA IDL K AGE +E++V+++ITIM NPR
Sbjct: 16 LNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELTEDKVERVITIMQNPR 75
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
QY+IP QK + DG+ SQ+ LD+KLRE+LERLKKIRAHRG+RH+WGL V
Sbjct: 76 QYEIP------QKGVRDGRCSQVPANG---LDNKLREELERLKKIRAHRGLRHFWGLHV 125
>UNIPROTKB|F1M6D1 [details] [associations]
symbol:F1M6D1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 IPI:IPI00780536
Ensembl:ENSRNOT00000061181 OMA:RREDINL Uniprot:F1M6D1
Length = 137
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 62/111 (55%), Positives = 84/111 (75%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++T+ID ++K+ F IKG GRR++++VL+KADIDL KRA E E+EV+++ITIM NPR
Sbjct: 15 LNTHIDWRQKIAFI---IKGVGRRYAHVVLRKADIDLTKRAREL-EDEVERVITIMQNPR 70
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGM 111
QY IPDWFLNRQKD+ +GK + LD+KL EDLE LK+I+AH G+
Sbjct: 71 QYTIPDWFLNRQKDVKNGKCAN-------GLDNKLCEDLEPLKRIQAHWGL 114
>UNIPROTKB|F1M2A2 [details] [associations]
symbol:F1M2A2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
IPI:IPI00777961 Ensembl:ENSRNOT00000059637 Uniprot:F1M2A2
Length = 117
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 63/114 (55%), Positives = 80/114 (70%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
++TN DG+ K FALTA+KG G+R + L+KADIDL KRAGE + E V+++I + N R
Sbjct: 10 LNTNFDGRWKTAFALTAVKGVGQRDAQ-ALRKADIDLTKRAGERTGE-VERVI-VTQNLR 66
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHY 114
Q+KIP W LNRQ D D KYSQ+L LDSK RE LE L+ IRAHR +RH+
Sbjct: 67 QHKIPGWVLNRQMDEKDRKYSQVLANG---LDSKSREYLEWLENIRAHRALRHF 117
>UNIPROTKB|J3JS69 [details] [associations]
symbol:RPS18 "HCG1777176, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:CH471081 GO:GO:0006412 EMBL:CH471052 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 GO:GO:0005581 EMBL:AL031228
EMBL:AL645940 EMBL:AL844527 EMBL:AL662827 EMBL:AL662820
EMBL:CR759817 EMBL:AL713971 SUPFAM:SSF46946 PANTHER:PTHR10871
UniGene:Hs.448854 UniGene:Hs.627414 HGNC:HGNC:10401
Ensembl:ENST00000474973 Ensembl:ENST00000476288
Ensembl:ENST00000477055 Ensembl:ENST00000484321
Ensembl:ENST00000486781 Ensembl:ENST00000494232 Uniprot:J3JS69
Length = 82
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 51/64 (79%), Positives = 56/64 (87%)
Query: 56 MTNPRQYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYW 115
M NPRQYKIPDWFLNRQKD+ DGKYSQ+L LD+KLREDLERLKKIRAHRG+RH+W
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANG---LDNKLREDLERLKKIRAHRGLRHFW 57
Query: 116 GLRV 119
GLRV
Sbjct: 58 GLRV 61
>UNIPROTKB|Q8TRR2 [details] [associations]
symbol:rps13 "30S ribosomal protein S13" species:188937
"Methanosarcina acetivorans C2A" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019977 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AE010299 GenomeReviews:AE010299_GR SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 KO:K02952 HAMAP:MF_01315
PANTHER:PTHR10871 RefSeq:NP_616052.1 ProteinModelPortal:Q8TRR2
GeneID:1472997 KEGG:mac:MA1108 OMA:FQHILRI ProtClustDB:PRK04053
BioCyc:MACE188937:GI2O-1171-MONOMER TIGRFAMs:TIGR03629
Uniprot:Q8TRR2
Length = 162
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 47/119 (39%), Positives = 69/119 (57%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPR 60
M+T++ G + V +ALT + G GRR + ++ K A +D + G EEEV K+ T +
Sbjct: 27 MNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAIGKFE 86
Query: 61 QYKIPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+P W LNRQKD+ G+ +L T RED+ LKK+RA+RG+RH GL+V
Sbjct: 87 DI-VPSWMLNRQKDLATGQDKHLLGTDILLT---FREDINNLKKVRAYRGLRHERGLKV 141
>UNIPROTKB|P95986 [details] [associations]
symbol:rps13 "30S ribosomal protein S13" species:273057
"Sulfolobus solfataricus P2" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019977 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AE006641
GenomeReviews:AE006641_GR GO:GO:0019843 EMBL:Y08257 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 KO:K02952 HAMAP:MF_01315
PANTHER:PTHR10871 OMA:FQHILRI ProtClustDB:PRK04053
TIGRFAMs:TIGR03629 PIR:S75414 RefSeq:NP_341646.1
ProteinModelPortal:P95986 GeneID:1455327 KEGG:sso:SSO0074
HOGENOM:HOG000039877 Uniprot:P95986
Length = 165
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 41/116 (35%), Positives = 68/116 (58%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
++DG K+ +AL +KG G + +++K +D N R GE S+ EV K+ +++++
Sbjct: 15 DVDGTMKLPYALAMVKGIGYNTAKAIIRKLGMDPNARLGELSDAEVKKVESVISDHTIKG 74
Query: 64 IPDWFLNRQKDIVDGKYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
+P W NR+KD G ++ T+ L +R D+ER KK R+ RG+RH GL+V
Sbjct: 75 LPSWLYNRRKDYESGLDLHLV---TSDLIFYVRNDIEREKKSRSWRGVRHSLGLKV 127
>UNIPROTKB|Q9X1I5 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:243274
"Thermotoga maritima MSB8" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:AE000512 GenomeReviews:AE000512_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 PIR:D72247 RefSeq:NP_229275.1
ProteinModelPortal:Q9X1I5 SMR:Q9X1I5 GeneID:897029 KEGG:tma:TM1475
PATRIC:23937906 Uniprot:Q9X1I5
Length = 125
Score = 94 (38.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 1 MSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKI 52
+ + +KV ALT I G GR S +LK ID KR G+ ++EE+ KI
Sbjct: 5 VGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKI 56
Score = 62 (26.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 79 KYSQILLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLRV 119
KY Q +L S++ ++ RL +I +RG+RH GL V
Sbjct: 58 KYIQDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPV 98
>UNIPROTKB|Q9GT46 [details] [associations]
symbol:IrpS18 "Ribosomal protein S18" species:7165
"Anopheles gambiae" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
PANTHER:PTHR10871 EMBL:AF283268 ProteinModelPortal:Q9GT46
STRING:Q9GT46 InParanoid:Q9GT46 ArrayExpress:Q9GT46 Uniprot:Q9GT46
Length = 46
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 95 LREDLERLKKIRAHRGMRHYWGLRV 119
LREDLERLK+I AHRGMRHYWGLRV
Sbjct: 1 LREDLERLKRIHAHRGMRHYWGLRV 25
>UNIPROTKB|Q3KLI8 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:315277
"Chlamydia trachomatis A/HAR-13" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:CP000051 GenomeReviews:CP000051_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_328332.1
ProteinModelPortal:Q3KLI8 SMR:Q3KLI8 STRING:Q3KLI8 GeneID:3687704
KEGG:cta:CTA_0558 PATRIC:32023022
BioCyc:CTRA315277:GI4C-584-MONOMER Uniprot:Q3KLI8
Length = 122
Score = 76 (31.8 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIM 56
+I K+K+ +LT I G G S ++ + ++ RA E +EEEV ++ ++
Sbjct: 8 DIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60
Score = 55 (24.4 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 91 LDSKLREDLERLKKIRAHRGMRHYWGLRV 119
L +++ D++RL I A+RG RH L V
Sbjct: 70 LRRRVQSDIKRLITIHAYRGQRHRLSLPV 98
>TIGR_CMR|APH_0301 [details] [associations]
symbol:APH_0301 "ribosomal protein S13" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952
OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
RefSeq:YP_504913.1 ProteinModelPortal:Q2GL38 SMR:Q2GL38
STRING:Q2GL38 GeneID:3931105 KEGG:aph:APH_0301 PATRIC:20949176
ProtClustDB:PRK05179 BioCyc:APHA212042:GHPM-331-MONOMER
Uniprot:Q2GL38
Length = 123
Score = 79 (32.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKI 52
N+ ++V+ ALT I G G +N + + ID N R SEE+V KI
Sbjct: 8 NVPVDKRVVVALTYIYGIGTSLANRICEGCGIDKNVRVSALSEEDVVKI 56
Score = 38 (18.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 89 AQLDSKLREDLERLKKIRAHRGMRH 113
A L ++ +++ L I +RG+RH
Sbjct: 68 ADLRKEVAMNIKFLMDIGCYRGLRH 92
>TIGR_CMR|CHY_2284 [details] [associations]
symbol:CHY_2284 "ribosomal protein S13" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_361093.1
ProteinModelPortal:Q3A9U1 SMR:Q3A9U1 STRING:Q3A9U1 GeneID:3726461
KEGG:chy:CHY_2284 PATRIC:21277639 HOGENOM:HOG000039878
BioCyc:CHYD246194:GJCN-2283-MONOMER Uniprot:Q3A9U1
Length = 123
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 9 RKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKI 52
++V ALT I G GR +N++LKK I+ + R + +EEEV K+
Sbjct: 13 KRVEIALTYIYGIGRPTANVILKKTGINPDTRVKDLTEEEVAKL 56
>UNIPROTKB|A9WH90 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:324602
"Chloroflexus aurantiacus J-10-fl" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:CP000909 GenomeReviews:CP000909_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_001635991.1
ProteinModelPortal:A9WH90 SMR:A9WH90 STRING:A9WH90 PRIDE:A9WH90
GeneID:5826857 KEGG:cau:Caur_2393 PATRIC:21415911
BioCyc:CAUR324602:GIXU-2432-MONOMER Uniprot:A9WH90
Length = 127
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 4 NIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIMTNPRQYK 63
+I +K+ A+T I G GR +L+KA+++ +R + +EEEV +I I+ R+Y+
Sbjct: 8 DIPRNKKIEIAITYIYGIGRSNGMEILRKANVNPERRVRDLTEEEVGRIREIVD--REYR 65
Query: 64 I 64
+
Sbjct: 66 V 66
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 140 119 0.00091 102 3 11 22 0.46 30
29 0.47 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 570 (61 KB)
Total size of DFA: 122 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.79u 0.07s 15.86t Elapsed: 00:00:07
Total cpu time: 15.79u 0.07s 15.86t Elapsed: 00:00:09
Start: Thu Aug 15 12:12:25 2013 End: Thu Aug 15 12:12:34 2013