BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13658
(228 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2A90|A Chain A, Crystal Structure Of The Tandem Wwe Domain Of Drosophila
Deltex
Length = 240
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 125/179 (69%), Gaps = 9/179 (5%)
Query: 4 HAVVVWEWLNRNRRWRPFTPEVTQLIERAHSKNLTSVILSDADPNLQNYFINLHTLQQCS 63
HAV VWE+ +R + W P++P V+Q +ERAH+K LT V LSDADP+L+ Y++N+ T Q S
Sbjct: 23 HAVSVWEFESRGK-WLPYSPAVSQHLERAHAKKLTRVXLSDADPSLEQYYVNVRTXTQES 81
Query: 64 EIDGA-----ITNVRRSFYPPDSPAGKGARWEWEG---DVHGEWHAYDMQAQCLIEYSWA 115
E + A VRR FY P SPAGKG +WEW G D + +W Y+ Q +IE +WA
Sbjct: 82 EAETAGSGLLTIGVRRXFYAPSSPAGKGTKWEWSGGSADSNNDWRPYNXHVQSIIEDAWA 141
Query: 116 KGDQTIDISKTHLGFPYILNFCNLTQVRNTTGNVRNIRRTQQAPYPLIKLSTNQMAEIQ 174
+G+QT+D+S TH+G PY +NF NLTQ+R +G R+IRRTQQAPYPL+KL+ Q +++
Sbjct: 142 RGEQTLDLSNTHIGLPYTINFSNLTQLRQPSGPXRSIRRTQQAPYPLVKLTPQQANQLK 200
>pdb|2DK6|A Chain A, Solution Structure Of Wwe Domain In Poly (Adp-Ribose)
Polymerase Family, Member 11 (Parp 11)
Length = 102
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 97 GEWHAY--DMQAQCL-----IEYSWAKGDQTIDISKTHLGFPYILNFCNLTQVRNTTGNV 149
G+WH + D +QC IE S+ K + IS T F Y ++F + Q+ TTG
Sbjct: 29 GKWHMFQPDTNSQCSVSSEDIEKSF-KTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQ 87
Query: 150 RNIRRTQQAPY 160
R I+R AP+
Sbjct: 88 RLIKR---APF 95
>pdb|3LG6|A Chain A, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis
pdb|3LG6|B Chain B, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis
pdb|3LG6|C Chain C, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis
pdb|3LG6|D Chain D, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis
pdb|3N5O|A Chain A, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis Bound To Glutathione
pdb|3N5O|B Chain B, Crystal Structure Of Putative Glutathione Transferase From
Coccidioides Immitis Bound To Glutathione
Length = 235
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 19 RPFTPEVTQLIERAHSKNLTSVILSDADPNLQNYFINLHTLQQCSEIDGAITNVRRSFYP 78
RP P ++ + RAH + + ++I D P NL ++ +DG T R
Sbjct: 101 RPLLPPISNPVARAHVRTICNIIACDVQP-----VTNLKIQKKVKALDGDPTVWSRDL-- 153
Query: 79 PDSPAGKGARWEWEGDVHGEWHAYD---MQAQCLIEYSWAKGDQTIDISK 125
+ G GA + G + D + CL+ WA +D+++
Sbjct: 154 --ATQGFGAVEKLLELSAGRFCVGDEITLADVCLVPAVWAAERVGMDLAR 201
>pdb|1FSA|A Chain A, The T-State Structure Of Lys 42 To Ala Mutant Of The Pig
Kidney Fructose 1,6-Bisphosphatase Expressed In E. Coli
pdb|1FSA|B Chain B, The T-State Structure Of Lys 42 To Ala Mutant Of The Pig
Kidney Fructose 1,6-Bisphosphatase Expressed In E. Coli
Length = 337
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 64 EIDGAITN-VRRSFYPPDSPAGKGARW--EWEGDVH 96
E D AIT ++R +PPD+ A GAR+ DVH
Sbjct: 218 EFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVH 253
>pdb|1KZ8|A Chain A, Crystal Structure Of Porcine Fructose-1,6-bisphosphatase
Complexed With A Novel Allosteric-site Inhibitor
pdb|1KZ8|F Chain F, Crystal Structure Of Porcine Fructose-1,6-bisphosphatase
Complexed With A Novel Allosteric-site Inhibitor
Length = 337
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 64 EIDGAITN-VRRSFYPPDSPAGKGARW--EWEGDVH 96
E D AIT ++R +PPD+ A GAR+ DVH
Sbjct: 218 EFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVH 253
>pdb|1FBP|A Chain A, Crystal Structure Of Fructose-1,6-Bisphosphatase Complexed
With Fructose 6-Phosphate, Amp, And Magnesium
pdb|1FBP|B Chain B, Crystal Structure Of Fructose-1,6-Bisphosphatase Complexed
With Fructose 6-Phosphate, Amp, And Magnesium
pdb|2FBP|A Chain A, Structure Refinement Of Fructose-1,6-bisphosphatase And
Its Fructose 2,6-bisphosphate Complex At 2.8 Angstroms
Resolution
pdb|2FBP|B Chain B, Structure Refinement Of Fructose-1,6-bisphosphatase And
Its Fructose 2,6-bisphosphate Complex At 2.8 Angstroms
Resolution
pdb|3FBP|A Chain A, Structure Refinement Of Fructose-1,6-Bisphosphatase And
Its Fructose 2,6-Bisphosphate Complex At 2.8 Angstroms
Resolution
pdb|3FBP|B Chain B, Structure Refinement Of Fructose-1,6-Bisphosphatase And
Its Fructose 2,6-Bisphosphate Complex At 2.8 Angstroms
Resolution
pdb|4FBP|A Chain A, Conformational Transition Of Fructose-1,6-Bisphosphatase:
Structure Comparison Between The Amp Complex (T Form)
And The Fructose 6-Phosphate Complex (R Form)
pdb|4FBP|B Chain B, Conformational Transition Of Fructose-1,6-Bisphosphatase:
Structure Comparison Between The Amp Complex (T Form)
And The Fructose 6-Phosphate Complex (R Form)
pdb|4FBP|C Chain C, Conformational Transition Of Fructose-1,6-Bisphosphatase:
Structure Comparison Between The Amp Complex (T Form)
And The Fructose 6-Phosphate Complex (R Form)
pdb|4FBP|D Chain D, Conformational Transition Of Fructose-1,6-Bisphosphatase:
Structure Comparison Between The Amp Complex (T Form)
And The Fructose 6-Phosphate Complex (R Form)
pdb|5FBP|A Chain A, Crystal Structure Of The Neutral Form Of
Fructose-1,6-Bisphosphatase Complexed With The Product
Fructose 6-Phosphate At 2.1-Angstroms Resolution
pdb|5FBP|B Chain B, Crystal Structure Of The Neutral Form Of
Fructose-1,6-Bisphosphatase Complexed With The Product
Fructose 6-Phosphate At 2.1-Angstroms Resolution
pdb|1FBC|A Chain A, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-Bisphosphatase
pdb|1FBC|B Chain B, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-Bisphosphatase
pdb|1FBD|A Chain A, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-bisphosphatase
pdb|1FBD|B Chain B, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-bisphosphatase
pdb|1FBE|A Chain A, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-Bisphosphatase
pdb|1FBE|B Chain B, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-Bisphosphatase
pdb|1FBF|A Chain A, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-bisphosphatase
pdb|1FBF|B Chain B, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-bisphosphatase
pdb|1FBG|A Chain A, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-bisphosphatase
pdb|1FBG|B Chain B, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-bisphosphatase
pdb|1FBH|A Chain A, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-Bisphosphatase
pdb|1FBH|B Chain B, Crystallographic Studies Of The Catalytic Mechanism Of The
Neutral Form Of Fructose-1,6-Bisphosphatase
pdb|1FPB|A Chain A, Crystal Structure Of The Neutral Form Of Fructose
1,6-Bisphosphatase Complexed With Regulatory Inhibitor
Fructose 2,6-Bisphosphate At 2.6- Angstroms Resolution
pdb|1FPB|B Chain B, Crystal Structure Of The Neutral Form Of Fructose
1,6-Bisphosphatase Complexed With Regulatory Inhibitor
Fructose 2,6-Bisphosphate At 2.6- Angstroms Resolution
pdb|1FPD|A Chain A, Structural Aspects Of The Allosteric Inhibition Of
Fructose-1,6- Bisphosphatase By Amp: The Binding Of Both
The Substrate Analogue 2,
5-anhydro-d-glucitol-1,6-bisphosphate And Catalytic
Metal Ions Monitored By X-ray Crystallography
pdb|1FPD|B Chain B, Structural Aspects Of The Allosteric Inhibition Of
Fructose-1,6- Bisphosphatase By Amp: The Binding Of Both
The Substrate Analogue 2,
5-anhydro-d-glucitol-1,6-bisphosphate And Catalytic
Metal Ions Monitored By X-ray Crystallography
pdb|1FPE|A Chain A, Structural Aspects Of The Allosteric Inhibition Of
Fructose-1,6- Bisphosphatase By Amp: The Binding Of Both
The Substrate Analogue 2,
5-Anhydro-D-Glucitol-1,6-Bisphosphate And Catalytic
Metal Ions Monitored By X-Ray Crystallography
pdb|1FPE|B Chain B, Structural Aspects Of The Allosteric Inhibition Of
Fructose-1,6- Bisphosphatase By Amp: The Binding Of Both
The Substrate Analogue 2,
5-Anhydro-D-Glucitol-1,6-Bisphosphate And Catalytic
Metal Ions Monitored By X-Ray Crystallography
pdb|1FPF|A Chain A, Structural Aspects Of The Allosteric Inhibition Of
Fructose-1,6- Bisphosphatase By Amp: The Binding Of Both
The Substrate Analogue 2,
5-Anhydro-D-Glucitol-1,6-Bisphosphate And Catalytic
Metal Ions Monitored By X-Ray Crystallography
pdb|1FPF|B Chain B, Structural Aspects Of The Allosteric Inhibition Of
Fructose-1,6- Bisphosphatase By Amp: The Binding Of Both
The Substrate Analogue 2,
5-Anhydro-D-Glucitol-1,6-Bisphosphate And Catalytic
Metal Ions Monitored By X-Ray Crystallography
pdb|1FPG|A Chain A, Structural Aspects Of The Allosteric Inhibition Of
Fructose-1,6- Bisphosphatase By Amp: The Binding Of Both
The Substrate Analogue 2,
5-anhydro-d-glucitol-1,6-bisphosphate And Catalytic
Metal Ions Monitored By X-ray Crystallography
pdb|1FPG|B Chain B, Structural Aspects Of The Allosteric Inhibition Of
Fructose-1,6- Bisphosphatase By Amp: The Binding Of Both
The Substrate Analogue 2,
5-anhydro-d-glucitol-1,6-bisphosphate And Catalytic
Metal Ions Monitored By X-ray Crystallography
pdb|1FPL|A Chain A, Fructose-1,6-Bisphosphatase (D-Fructose-1,6-Bisphosphate
1- Phosphohydrolase) Complexed With Amp,
2,5-Anhydro-D-Glucitol-1,6- Bisphosphate And Thallium
Ions (10 Mm)
pdb|1FPL|B Chain B, Fructose-1,6-Bisphosphatase (D-Fructose-1,6-Bisphosphate
1- Phosphohydrolase) Complexed With Amp,
2,5-Anhydro-D-Glucitol-1,6- Bisphosphate And Thallium
Ions (10 Mm)
pdb|1FPK|A Chain A, Fructose-1,6-Bisphosphatase (D-Fructose-1,6-Bisphosphate
1- Phosphohydrolase) Complexed With Thallium Ions (10
Mm)
pdb|1FPK|B Chain B, Fructose-1,6-Bisphosphatase (D-Fructose-1,6-Bisphosphate
1- Phosphohydrolase) Complexed With Thallium Ions (10
Mm)
pdb|1FPJ|A Chain A, Fructose-1,6-Bisphosphatase (D-Fructose-1,6-Bisphosphate
1- Phosphohydrolase) Complexed With Amp,
2,5-Anhydro-D-Glucitol-1,6- Bisphosphate, Thallium (10
Mm) And Lithium Ions (10 Mm)
pdb|1FPJ|B Chain B, Fructose-1,6-Bisphosphatase (D-Fructose-1,6-Bisphosphate
1- Phosphohydrolase) Complexed With Amp,
2,5-Anhydro-D-Glucitol-1,6- Bisphosphate, Thallium (10
Mm) And Lithium Ions (10 Mm)
pdb|1FPI|A Chain A, Fructose-1,6-Bisphosphatase (D-Fructose-1,6-Bisphosphate
1- Phosphohydrolase) Complexed With Amp,
2,5-Anhydro-D-Glucitol-1,6- Bisphosphate And Potassium
Ions (100 Mm)
pdb|1FPI|B Chain B, Fructose-1,6-Bisphosphatase (D-Fructose-1,6-Bisphosphate
1- Phosphohydrolase) Complexed With Amp,
2,5-Anhydro-D-Glucitol-1,6- Bisphosphate And Potassium
Ions (100 Mm)
Length = 335
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 64 EIDGAITN-VRRSFYPPDSPAGKGARW--EWEGDVH 96
E D AIT ++R +PPD+ A GAR+ DVH
Sbjct: 218 EFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVH 253
>pdb|1FRP|A Chain A, Crystal Structure Of Fructose-1,6-Bisphosphatase Complexed
With Fructose-2,6-Bisphosphate, Amp And Zn2+ At 2.0
Angstroms Resolution. Aspects Of Synergism Between
Inhibitors
pdb|1FRP|B Chain B, Crystal Structure Of Fructose-1,6-Bisphosphatase Complexed
With Fructose-2,6-Bisphosphate, Amp And Zn2+ At 2.0
Angstroms Resolution. Aspects Of Synergism Between
Inhibitors
Length = 335
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 64 EIDGAITN-VRRSFYPPDSPAGKGARW--EWEGDVH 96
E D AIT ++R +PPD+ A GAR+ DVH
Sbjct: 218 EFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVH 253
>pdb|2F3B|A Chain A, Mechanism Of Displacement Of A Catalytically Essential
Loop From The Active Site Of Fructose-1,6-bisphosphatase
pdb|2F3D|A Chain A, Mechanism Of Displacement Of A Catalytically Essential
Loop From The Active Site Of Fructose-1,6-Bisphosphatase
pdb|2F3H|A Chain A, Mechanism Of Displacement Of A Catalytically Essential
Loop From The Active Site Of Fructose-1,6-Bisphosphatase
pdb|2F3H|B Chain B, Mechanism Of Displacement Of A Catalytically Essential
Loop From The Active Site Of Fructose-1,6-Bisphosphatase
Length = 338
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 64 EIDGAITN-VRRSFYPPDSPAGKGARW--EWEGDVH 96
E D AIT ++R +PPD+ A GAR+ DVH
Sbjct: 219 EFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVH 254
>pdb|1YXI|A Chain A, R-State Amp Complex Reveals Initial Steps Of The
Quaternary Transition Of Fructose-1,6-Bisphosphatase
pdb|1YYZ|A Chain A, R-State Amp Complex Reveals Initial Steps Of The
Quaternary Transition Of Fructose-1,6-Bisphosphatase
pdb|1YZ0|A Chain A, R-State Amp Complex Reveals Initial Steps Of The
Quaternary Transition Of Fructose-1,6-Bisphosphatase
pdb|1YZ0|B Chain B, R-State Amp Complex Reveals Initial Steps Of The
Quaternary Transition Of Fructose-1,6-Bisphosphatase
Length = 337
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 64 EIDGAITN-VRRSFYPPDSPAGKGARW--EWEGDVH 96
E D AIT ++R +PPD+ A GAR+ DVH
Sbjct: 218 EFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVH 253
>pdb|1LEV|A Chain A, Porcine Kidney Fructose-1,6-bisphosphatase Complexed With
An Amp-site Inhibitor
pdb|1LEV|F Chain F, Porcine Kidney Fructose-1,6-bisphosphatase Complexed With
An Amp-site Inhibitor
Length = 337
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 64 EIDGAITN-VRRSFYPPDSPAGKGARW--EWEGDVH 96
E D AIT ++R +PPD+ A GAR+ DVH
Sbjct: 218 EFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVH 253
>pdb|1CNQ|A Chain A, Fructose-1,6-Bisphosphatase Complexed With
Fructose-6-Phosphate And Zinc Ions
pdb|1EYI|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate And Phosphate (R-State)
pdb|1EYJ|A Chain A, Fructose-1,6-Bisphosphatase Complex With Amp, Magnesium,
Fructose-6- Phosphate And Phosphate (T-State)
pdb|1EYJ|B Chain B, Fructose-1,6-Bisphosphatase Complex With Amp, Magnesium,
Fructose-6- Phosphate And Phosphate (T-State)
pdb|1EYK|A Chain A, Fructose-1,6-Bisphosphatase Complex With Amp, Zinc,
Fructose-6- Phosphate And Phosphate (T-State)
pdb|1EYK|B Chain B, Fructose-1,6-Bisphosphatase Complex With Amp, Zinc,
Fructose-6- Phosphate And Phosphate (T-State)
pdb|1NUW|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate And Phosphate At Ph 9.6
pdb|1NUX|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate, Phosphate And Inhibitory
Concentrations Of Potassium (200mm)
pdb|1NUY|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate, And Phosphate
pdb|1NUZ|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate And Phosphate
pdb|1NV0|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate, Phosphate And 1 Mm Thallium
pdb|1NV1|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate, Phosphate And Thallium (5 Mm)
pdb|1NV2|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate, Phosphate And Thallium (20 Mm)
pdb|1NV3|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate, Phosphate And Thallium (100 Mm)
pdb|1NV4|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate, Phosphate, Edta And Thallium (1
Mm)
pdb|1NV5|A Chain A, Fructose-1,6-Bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate, Phosphate, Edta And Thallium (5
Mm)
pdb|1NV6|A Chain A, Fructose-1,6-bisphosphatase Complex With Magnesium,
Fructose-6- Phosphate, Phosphate, Edta And Thallium (20
Mm)
pdb|1NV7|A Chain A, Fructose-1,6-Bisphosphatase Complex With Amp, Magnesium,
Fructose-6-Phosphate, Phosphate And Thallium (20 Mm)
pdb|1NV7|B Chain B, Fructose-1,6-Bisphosphatase Complex With Amp, Magnesium,
Fructose-6-Phosphate, Phosphate And Thallium (20 Mm)
pdb|1Q9D|A Chain A, Fructose-1,6-Bisphosphatase Complexed With A New
Allosteric Site Inhibitor (I-State)
pdb|1Q9D|B Chain B, Fructose-1,6-Bisphosphatase Complexed With A New
Allosteric Site Inhibitor (I-State)
pdb|2QVU|A Chain A, Porcine Liver Fructose-1,6-Bisphosphatase Cocrystallized
With Fru-2,6- P2 And Mg2+, I(T)-State
pdb|2QVU|B Chain B, Porcine Liver Fructose-1,6-Bisphosphatase Cocrystallized
With Fru-2,6- P2 And Mg2+, I(T)-State
pdb|2QVV|A Chain A, Porcine Liver Fructose-1,6-Bisphosphatase Cocrystallized
With Fru-2,6- P2 And Zn2+, I(T)-State
pdb|2QVV|B Chain B, Porcine Liver Fructose-1,6-Bisphosphatase Cocrystallized
With Fru-2,6- P2 And Zn2+, I(T)-State
Length = 337
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 64 EIDGAITN-VRRSFYPPDSPAGKGARW--EWEGDVH 96
E D AIT ++R +PPD+ A GAR+ DVH
Sbjct: 218 EFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVH 253
>pdb|1FJ6|A Chain A, Fructose-1,6-Bisphosphatase (Mutant Y57w) ProductZN
COMPLEX (R-State)
pdb|1FJ9|A Chain A, Fructose-1,6-Bisphosphatase (Mutant Y57w) ProductsZNAMP
COMPLEX (T- State)
pdb|1FJ9|B Chain B, Fructose-1,6-Bisphosphatase (Mutant Y57w) ProductsZNAMP
COMPLEX (T- State)
Length = 337
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 64 EIDGAITN-VRRSFYPPDSPAGKGARW--EWEGDVH 96
E D AIT ++R +PPD+ A GAR+ DVH
Sbjct: 218 EFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVH 253
>pdb|2DIE|A Chain A, Alkaline Alpha-Amylase Amyk From Bacillus Sp. Ksm-1378
Length = 485
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 31/156 (19%)
Query: 84 GKGARWEWEGDVHGEWHAYDMQAQCLIEY-----------SWAKGDQTIDISK----THL 128
G G W+WE D+ + Y M A +++ W +D + H+
Sbjct: 182 GTGKAWDWEVDIENGNYDYLMYADIDMDHPEVINELRNWGVWYTNTLNLDGFRIDAVKHI 241
Query: 129 GFPYILNFCNLTQVRNTTGNVRNIRRTQQAPYPLIKLSTNQMAEIQGQMSAS--QGAVTM 186
+ Y ++ LT VRNTTG + + + + N +A I+ ++ + +V
Sbjct: 242 KYSYTRDW--LTHVRNTTG---------KPMFAVAEFWKNDLAAIENYLNKTSWNHSVFD 290
Query: 187 TTPGKKCKHTTSSNITRTLRNIFHGPV---HPMSPV 219
+ ++S +RNI +G V HP+ V
Sbjct: 291 VPLHYNLYNASNSGGYFDMRNILNGSVVQKHPIHAV 326
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.132 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,305,304
Number of Sequences: 62578
Number of extensions: 284550
Number of successful extensions: 607
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 602
Number of HSP's gapped (non-prelim): 15
length of query: 228
length of database: 14,973,337
effective HSP length: 95
effective length of query: 133
effective length of database: 9,028,427
effective search space: 1200780791
effective search space used: 1200780791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)