BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13664
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60095|TGCE3_SCHPO Probable lipase C14C8.15 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC14C8.15 PE=3 SV=1
Length = 460
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 57 TMDIISSQGFPVERHFIQTEDGYILALHRIPSQGV----------PVLLMHGFAGASDMW 106
T+D+ + G+ +E HF++T DGY+L LHR+ + PVL +HG S+ W
Sbjct: 75 TIDLCALHGYDLEEHFVRTTDGYLLGLHRVYKKKKGKIEELNYLPPVLFIHGLMMNSESW 134
Query: 107 VFRNDTTTDLLPVPDVSS-YKWELGGAQSN 135
V N D +P V Y LG + N
Sbjct: 135 VC-NLKKEDAIPFALVEQGYDVWLGNLRGN 163
>sp|Q5VYY2|LIPM_HUMAN Lipase member M OS=Homo sapiens GN=LIPM PE=2 SV=2
Length = 423
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 12/70 (17%)
Query: 47 DPSFIKNIVPTMDIISSQGFPVERHFIQTEDGYILALHRIPSQGVP---------VLLMH 97
DP NI +II QG+P E + + TEDGYIL+++RIP V VLL H
Sbjct: 42 DPEAFMNIS---EIIQHQGYPCEEYEVATEDGYILSVNRIPRGLVQPKKTGSRPVVLLQH 98
Query: 98 GFAGASDMWV 107
G G + W+
Sbjct: 99 GLVGGASNWI 108
>sp|O46107|LIP1_DROME Lipase 1 OS=Drosophila melanogaster GN=Lip1 PE=2 SV=2
Length = 439
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIPSQGV-PVLLMHGFAGASDMWVFRNDTTTDLL 117
+I+ G+ E H + TEDGYIL +HRI QG P LL HG +S +V +
Sbjct: 70 KLIAKYGYESEVHHVTTEDGYILTMHRIRKQGAPPFLLQHGLVDSSAGFVVMGPNVSLAY 129
Query: 118 PVPDVSSYKWELGGAQSN 135
+ D + W LG A+ N
Sbjct: 130 LLADHNYDVW-LGNARGN 146
>sp|Q71DJ5|LIP1_ARATH Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1
Length = 393
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIPS------QGVPVLLMHGFAGASDMWVFRN 110
D+I + H IQT+DGYILAL R+ S G PVLL HG A D+W +
Sbjct: 35 DLIHPANYSCTEHSIQTKDGYILALQRVASLGPRLQSGPPVLLQHGLFMAGDVWFLNS 92
>sp|O46108|LIP3_DROME Lipase 3 OS=Drosophila melanogaster GN=Lip3 PE=2 SV=1
Length = 394
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIP-------SQGVPV-LLMHGFAGASDMWVFRN 110
+ I G+P+ERH + T D YIL +HRIP S PV LMHG +S WV
Sbjct: 30 ERIEDDGYPMERHEVVTSDNYILTMHRIPYSPKTGESSNRPVAFLMHGMLSSSSDWVLMG 89
Query: 111 DTTTDLLPVPDVSSYKWELGGAQSN 135
+ + D W +G A+ N
Sbjct: 90 PERSLAYMLADAGYDVW-MGNARGN 113
>sp|P78898|TGCE2_SCHPO Probable lipase C16A3.12c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPBC16A3.12c PE=3 SV=2
Length = 443
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRI--PSQGVP----VLLMHGFAGASDMWVFRNDT 112
+I + G+ VE H ++T+D +IL LHRI P Q V HG S++WV N++
Sbjct: 77 EICEAFGYRVEEHLVRTQDNFILCLHRITHPKQSQHKREVVYCHHGLMTNSELWVAVNES 136
Query: 113 TTDLLPVPDVSSYKWELGGAQSN 135
L V S Y LG + N
Sbjct: 137 ERSLPFVLIESGYDVWLGNNRGN 159
>sp|Q4R4S5|LICH_MACFA Lysosomal acid lipase/cholesteryl ester hydrolase OS=Macaca
fascicularis GN=LIPA PE=2 SV=1
Length = 399
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIP------SQGVP---VLLMHGFAGASDMWV 107
+IIS GFP E + ++TEDGYIL L+RIP S P V L HG S WV
Sbjct: 39 EIISYWGFPSEEYLVETEDGYILCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWV 96
>sp|P38571|LICH_HUMAN Lysosomal acid lipase/cholesteryl ester hydrolase OS=Homo sapiens
GN=LIPA PE=1 SV=2
Length = 399
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIP------SQGVP---VLLMHGFAGASDMWV 107
+IIS GFP E + ++TEDGYIL L+RIP S P V L HG S WV
Sbjct: 39 EIISYWGFPSEEYLVETEDGYILCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWV 96
>sp|Q8K2A6|LIPM_MOUSE Lipase member M OS=Mus musculus GN=Lipm PE=2 SV=1
Length = 422
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 47 DPSFIKNIVPTMDIISSQGFPVERHFIQTEDGYILALHRIPSQGVP---------VLLMH 97
DP N+ +II +G+P E + + TEDGYIL+++RIP VLL H
Sbjct: 42 DPEAFMNVS---EIIKHKGYPSEEYEVATEDGYILSVNRIPRGQTRLKKEGSRPVVLLQH 98
Query: 98 GFAGASDMWV 107
G G + W+
Sbjct: 99 GLLGDASNWI 108
>sp|Q5W064|LIPJ_HUMAN Lipase member J OS=Homo sapiens GN=LIPJ PE=2 SV=3
Length = 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 60 IISSQGFPVERHFIQTEDGYILALHRIP----------SQGVPVLLMHGFAGASDMWV 107
IIS G+P E + I TEDGYIL L+RIP +Q V V L HG ++ W+
Sbjct: 6 IISYWGYPDEEYDIVTEDGYILGLYRIPYWRTDNNKNLAQRVVVYLQHGLLTSASSWI 63
>sp|Q9Z0M5|LICH_MOUSE Lysosomal acid lipase/cholesteryl ester hydrolase OS=Mus musculus
GN=Lipa PE=2 SV=2
Length = 397
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 13/102 (12%)
Query: 43 VSYPDPSFIKNIVPTMDIISSQGFPVERHFIQTEDGYILALHRIPSQGVP---------V 93
VS DP N+ +II G+P E H + T DGYIL++HRIP V
Sbjct: 24 VSAVDPEVNMNVT---EIIMRWGYPGEEHSVLTGDGYILSIHRIPRGRKNHFGKGPRPVV 80
Query: 94 LLMHGFAGASDMWVFRNDTTTDLLPVPDVSSYKWELGGAQSN 135
L HG S WV D ++ + D W +G ++ N
Sbjct: 81 YLQHGLLADSSNWVTNIDNSSLGFLLADAGFDVW-MGNSRGN 121
>sp|Q8BM14|LIPK_MOUSE Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1
Length = 398
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIP-SQGVP--------VLLMHGFAGASDMWVFR 109
++IS G+P E+H + TEDGYIL +RIP +G V L HG +++ W+
Sbjct: 36 ELISYWGYPYEKHDVITEDGYILGTYRIPHGKGCSRKTAPKAVVYLQHGLIASANNWICN 95
Query: 110 NDTTTDLLPVPDVSSYKWELGGAQSN 135
+ + D S Y LG ++ N
Sbjct: 96 LPNNSLAFLLAD-SGYDVWLGNSRGN 120
>sp|Q5VXJ0|LIPK_HUMAN Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2
Length = 399
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIP-SQGVP--------VLLMHGFAGASDMWVFR 109
IIS G+P E + + T+DGYIL ++RIP +G P V L HG ++ W+
Sbjct: 37 QIISYWGYPYEEYDVTTKDGYILGIYRIPHGRGCPGRTAPKPAVYLQHGLIASASNWICN 96
Query: 110 NDTTTDLLPVPDVSSYKWELGGAQSN 135
+ + D S Y LG ++ N
Sbjct: 97 LPNNSLAFLLAD-SGYDVWLGNSRGN 121
>sp|Q29458|LIPG_BOVIN Gastric triacylglycerol lipase OS=Bos taurus GN=LIPF PE=1 SV=1
Length = 397
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 13 VIITLYLISCSSTDYVFISKDSNLQWTLPDVSYPDPSFIKNIVPTMDIISSQGFPVERHF 72
+++T+ I S + F+ K + +P N+ +IS G+P E H
Sbjct: 4 LLVTVCFIHMSGNAFCFLGKIAK-----------NPEASMNVS---QMISYWGYPSEMHK 49
Query: 73 IQTEDGYILALHRIP---------SQGVPVLLMHGFAGASDMWV 107
+ T DGYIL ++RIP Q V L HG G++ W+
Sbjct: 50 VITADGYILQVYRIPHGKNNANHLGQRPVVFLQHGLLGSATNWI 93
>sp|P34163|TGL1_YEAST Sterol esterase TGL1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TGL1 PE=1 SV=1
Length = 548
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query: 68 VERHFIQTEDGYILALHRIPS------QGVPVLLMHGFAGASDMWV 107
VE H ++TED YIL LHRIP V L HG SD+W
Sbjct: 77 VEDHLVRTEDNYILTLHRIPPISKNRFNNKVVYLHHGLLMCSDVWC 122
>sp|Q64194|LICH_RAT Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus
norvegicus GN=Lipa PE=2 SV=1
Length = 397
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 43 VSYPDPSFIKNIVPTMDIISSQGFPVERHFIQTEDGYILALHRIP-------SQG-VPVL 94
+S DP N+ +II G+P H +QT DGYIL +HRIP +G PV+
Sbjct: 24 ISAVDPEANMNVT---EIIMHWGYP--EHSVQTGDGYILGVHRIPHGRKNQFDKGPKPVV 78
Query: 95 LM---HGFAGASDMWVFRNDTTTDLLPVPDVSSYKWELGGAQSN 135
+ HGF S WV D + + D W +G ++ N
Sbjct: 79 YLQWRHGFLADSSNWVTNIDNNSLGFILADAGFDVW-MGNSRGN 121
>sp|P07098|LIPG_HUMAN Gastric triacylglycerol lipase OS=Homo sapiens GN=LIPF PE=1 SV=1
Length = 398
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 12/63 (19%)
Query: 57 TMDI---ISSQGFPVERHFIQTEDGYILALHRIP---------SQGVPVLLMHGFAGASD 104
TM+I I+ G+P E + + TEDGYIL ++RIP Q V L HG ++
Sbjct: 32 TMNISQMITYWGYPNEEYEVVTEDGYILEVNRIPYGKKNSGNTGQRPVVFLQHGLLASAT 91
Query: 105 MWV 107
W+
Sbjct: 92 NWI 94
>sp|O74430|TGCE1_SCHPO Probable lipase C1672.09 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC1672.09 PE=1 SV=1
Length = 467
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 16/91 (17%)
Query: 43 VSYPDPSFIKNIVPTMDIISSQGFPVERHFIQTEDGYILALHRI------------PSQG 90
VS I + ++ G+ VE H ++TED YIL +HRI P +
Sbjct: 67 VSLQRAKAIHDAADIREMCKISGYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKL 126
Query: 91 VPVLLMHGFAGASDMWVF----RNDTTTDLL 117
V HG S++WV RN DL+
Sbjct: 127 PVVYCHHGLLMNSEVWVCNVDPRNCLVFDLV 157
>sp|P04634|LIPG_RAT Gastric triacylglycerol lipase OS=Rattus norvegicus GN=Lipf PE=2
SV=1
Length = 395
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIP-----SQGVP----VLLMHGFAGASDMWVFR 109
+I+ G+P + + + TEDGYIL ++RIP S+ + V L HG ++ W+
Sbjct: 36 QMITYWGYPCQEYEVVTEDGYILGVYRIPHGKNNSENIGKRPVVYLQHGLIASATNWIAN 95
Query: 110 NDTTTDLLPVPDVSSYKWELGGAQSN 135
+ + D W LG ++ N
Sbjct: 96 LPNNSLAFMLADAGYDVW-LGNSRGN 120
>sp|P80035|LIPG_CANFA Gastric triacylglycerol lipase OS=Canis familiaris GN=LIPF PE=1
SV=2
Length = 398
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 57 TMDI---ISSQGFPVERHFIQTEDGYILALHRIP-----SQGV---PV-LLMHGFAGASD 104
TM+I I+ G+P E + + TEDGYIL + RIP S+ + PV L HG ++
Sbjct: 32 TMNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT 91
Query: 105 MWV 107
W+
Sbjct: 92 NWI 94
>sp|Q9CPP7|LIPG_MOUSE Gastric triacylglycerol lipase OS=Mus musculus GN=Lipf PE=2 SV=1
Length = 395
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIP-----SQGV---PV-LLMHGFAGASDMWVFR 109
+I+ G+P E + + TEDGYIL ++RIP S+ + PV L HG ++ W+
Sbjct: 36 QMITYWGYPSEEYEVVTEDGYILGVYRIPYGKKNSENIGKRPVAYLQHGLIASATNWITN 95
Query: 110 NDTTTDLLPVPDVSSYKWELGGAQSN 135
+ + D W LG ++ N
Sbjct: 96 LPNNSLAFILADAGYDVW-LGNSRGN 120
>sp|Q5VXI9|LIPN_HUMAN Lipase member N OS=Homo sapiens GN=LIPN PE=2 SV=2
Length = 398
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 57 TMDIISSQGFPVERHFIQTEDGYILALHRIP 87
T +II G+P E + + TEDGYIL ++RIP
Sbjct: 36 TSEIIIYNGYPSEEYEVTTEDGYILLVNRIP 66
>sp|Q3U4B4|LIPN_MOUSE Lipase member N OS=Mus musculus GN=Lipn PE=2 SV=1
Length = 400
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 59 DIISSQGFPVERHFIQTEDGYILALHRIP 87
+II G+P E + + T DGYILA++RIP
Sbjct: 40 EIIMYNGYPSEEYDVTTADGYILAINRIP 68
>sp|Q67ZU1|LIP2_ARATH Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1
Length = 418
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 11/45 (24%)
Query: 65 GFPVERHFIQTEDGYILALHRIP-----------SQGVPVLLMHG 98
G+ E H + T+DGYIL + RIP + PVL+ HG
Sbjct: 60 GYKCEEHDVVTQDGYILNMQRIPEGRAGAVAGDGGKRQPVLIQHG 104
>sp|Q5MGH0|SPI3_LONON Serine protease inhibitor 3/4 (Fragment) OS=Lonomia obliqua PE=1
SV=1
Length = 383
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 2 RPWNPGDISVVVIITLYLISCSSTDYVFISKDSNLQWT---LPDVSYPDPSFIKNIV 55
RP PG I + + L + + TD I +D N Q+T LP++ +P+ KNIV
Sbjct: 1 RPLRPGKILICIFALAALTTATETDLQRILRDGNDQFTAKMLPEIVKENPN--KNIV 55
>sp|Q64U25|SUCC_BACFR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacteroides
fragilis (strain YCH46) GN=sucC PE=3 SV=1
Length = 382
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 59 DIISSQGFPVERH-FIQTEDGYILALHRIPSQGVPV---LLMHGFAGASDMWVFRND 111
+I S+ G PVERH T DG + A HR+ V + +L G A + + ND
Sbjct: 10 EIFSTYGIPVERHALCHTADGAVAAYHRMGVNRVAIKAQVLTGGRGKAGGVKLANND 66
>sp|Q5LCW4|SUCC_BACFN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacteroides
fragilis (strain ATCC 25285 / NCTC 9343) GN=sucC PE=3
SV=1
Length = 382
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 59 DIISSQGFPVERH-FIQTEDGYILALHRIPSQGVPV---LLMHGFAGASDMWVFRND 111
+I S+ G PVERH T DG + A HR+ V + +L G A + + ND
Sbjct: 10 EIFSTYGIPVERHALCHTADGAVAAYHRMGVNRVAIKAQVLTGGRGKAGGVKLANND 66
>sp|Q15KI9|PHYLO_ARATH Protein PHYLLO, chloroplastic OS=Arabidopsis thaliana GN=PHYLLO PE=2
SV=2
Length = 1715
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 51 IKNIVPTMDII--SSQGFPVERHFIQTE-DGY--ILALHRIP--SQGVPVLLMHGFAGAS 103
+K++ D+I +S+G PV R+ ++ + DG+ + +H + ++G L +HGF G
Sbjct: 1385 LKDVKINNDVIVRTSKGIPVRRYELRVDVDGFSHFIRVHDVGENAEGSVALFLHGFLGTG 1444
Query: 104 DMWV 107
+ W+
Sbjct: 1445 EEWI 1448
>sp|P0A3G3|DHAA_RHOSO Haloalkane dehalogenase OS=Rhodococcus sp. GN=dhaA PE=1 SV=1
Length = 293
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 65 GFPVERHFIQTEDGYILALHRIPSQGVPVLLMHGFAGASDMW 106
GFP + H+++ + + P G PVL +HG +S +W
Sbjct: 7 GFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLW 48
>sp|P59336|DHAA_RHOSD Haloalkane dehalogenase OS=Rhodococcus sp. (strain TDTM0003)
GN=dhaA PE=1 SV=1
Length = 294
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 65 GFPVERHFIQTEDGYILALHRIPSQGVPVLLMHGFAGASDMW 106
GFP + H+++ + + P G PVL +HG +S +W
Sbjct: 7 GFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLW 48
>sp|P0A3G2|DHAA_RHORH Haloalkane dehalogenase OS=Rhodococcus rhodochrous GN=dhaA PE=1
SV=1
Length = 293
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 65 GFPVERHFIQTEDGYILALHRIPSQGVPVLLMHGFAGASDMW 106
GFP + H+++ + + P G PVL +HG +S +W
Sbjct: 7 GFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLW 48
>sp|P0A3G4|DHAA_PSEPV Haloalkane dehalogenase OS=Pseudomonas pavonaceae GN=dhaA PE=1 SV=1
Length = 293
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 65 GFPVERHFIQTEDGYILALHRIPSQGVPVLLMHGFAGASDMW 106
GFP + H+++ + + P G PVL +HG +S +W
Sbjct: 7 GFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLW 48
>sp|B4RF90|DHMA_PHEZH Haloalkane dehalogenase OS=Phenylobacterium zucineum (strain
HLK1) GN=dhmA PE=3 SV=1
Length = 301
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 73 IQTEDGYILALHRI---PSQGVPVLLMHG 98
++ DG +L +H + P G PVLLMHG
Sbjct: 26 VKDADGTLLRIHHVDEGPRDGAPVLLMHG 54
>sp|Q9ZER0|DHAA_MYCSX Haloalkane dehalogenase OS=Mycobacterium sp. (strain GP1) GN=dhaAF
PE=2 SV=1
Length = 307
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 65 GFPVERHFIQTEDGYILALHRIPSQGVPVLLMHGFAGASDMW 106
GFP + H+++ + + P G PVL +HG +S +W
Sbjct: 7 GFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLW 48
>sp|Q6NAM1|DEHA_RHOPA Fluoroacetate dehalogenase OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=RPA1163 PE=1 SV=1
Length = 302
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 65 GFPVERHFIQTEDGYILALHRIPSQGVPVLLMHGFAGASDMW 106
GF E +I T G I A R+ G P+LL+HGF MW
Sbjct: 10 GFGSE--WINTSSGRIFA--RVGGDGPPLLLLHGFPQTHVMW 47
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,057,128
Number of Sequences: 539616
Number of extensions: 2354811
Number of successful extensions: 4330
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4300
Number of HSP's gapped (non-prelim): 38
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)