Query psy13666
Match_columns 278
No_of_seqs 208 out of 1361
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 17:20:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13666.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13666hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2y_A N-acetylmuramoyl-L-alan 100.0 7E-63 2.4E-67 448.3 17.5 235 26-277 20-260 (261)
2 1j3g_A AMPD protein, AMPD; mix 100.0 7.8E-42 2.7E-46 296.0 11.8 150 13-184 11-177 (187)
3 3hma_A N-acetylmuramoyl-L-alan 100.0 1.2E-37 4.3E-42 262.7 9.1 132 26-184 16-155 (157)
4 1yb0_A Prophage lambdaba02, N- 100.0 4.6E-36 1.6E-40 253.3 2.6 141 14-184 6-153 (159)
5 1lba_A T7 lysozyme; hydrolase( 100.0 1.2E-30 4.2E-35 217.2 14.1 135 31-192 4-143 (146)
6 3lat_A Bifunctional autolysin; 100.0 2E-31 6.9E-36 234.5 6.8 132 26-184 45-197 (213)
7 2cb3_A Peptidoglycan-recogniti 100.0 9.5E-30 3.2E-34 218.0 9.0 140 11-176 5-157 (175)
8 1sk4_A Peptidoglycan recogniti 100.0 2.5E-29 8.7E-34 212.9 11.4 137 13-176 3-151 (163)
9 2rkq_A Peptidoglycan-recogniti 100.0 1.3E-29 4.6E-34 215.9 9.1 139 12-176 3-154 (169)
10 2xz4_A Peptidoglycan-recogniti 100.0 1.4E-29 4.9E-34 217.7 9.4 142 9-176 6-160 (180)
11 1oht_A CG14704 protein; peptid 100.0 6.2E-29 2.1E-33 219.3 10.0 143 7-176 9-165 (215)
12 1yck_A Peptidoglycan recogniti 100.0 1.3E-28 4.4E-33 210.9 10.8 147 13-192 12-171 (175)
13 2f2l_X Peptidoglycan recogniti 99.9 3E-27 1E-31 201.0 13.3 140 11-176 1-153 (167)
14 1sxr_A Peptidoglycan recogniti 99.9 3.9E-27 1.3E-31 203.1 11.7 150 12-194 13-174 (183)
15 1s2j_A Peptidoglycan recogniti 99.9 7.5E-27 2.5E-31 205.2 12.9 150 12-194 39-200 (209)
16 2f2l_A Peptidoglycan-recogniti 99.9 1.3E-23 4.4E-28 178.6 10.1 148 13-191 2-164 (167)
17 3ep1_A PGRP-HD - peptidoglycan 99.7 7.3E-18 2.5E-22 144.0 6.9 133 12-176 4-162 (176)
18 2xz8_A Peptidoglycan-recogniti 99.7 5.8E-16 2E-20 129.1 11.3 127 9-167 5-144 (150)
19 3bkh_A Phikz144, lytic transgl 98.1 2.7E-06 9.4E-11 76.8 5.2 57 211-272 15-77 (268)
20 1lbu_A Muramoyl-pentapeptide c 98.1 3E-06 1E-10 73.6 4.9 56 211-271 13-76 (213)
21 4fet_B Spore cortex-lytic enzy 97.8 3E-06 1E-10 74.6 0.0 56 211-271 10-71 (222)
22 1l6j_A Matrix metalloproteinas 94.7 0.049 1.7E-06 52.0 6.6 49 216-269 22-76 (425)
23 1eak_A 72 kDa type IV collagen 93.7 0.12 4.2E-06 49.2 7.1 49 216-269 15-67 (421)
24 1slm_A Stromelysin-1; hydrolas 93.4 0.071 2.4E-06 47.4 4.6 47 217-268 14-70 (255)
25 1ck7_A Protein (gelatinase A); 91.7 0.28 9.5E-06 49.1 6.7 48 216-268 17-68 (631)
26 1su3_A Interstitial collagenas 89.7 0.33 1.1E-05 46.5 5.1 48 216-268 11-68 (450)
27 2ikb_A Hypothetical protein NM 85.4 0.83 2.8E-05 38.0 4.4 31 235-270 89-119 (167)
28 2nr7_A Secretion activator pro 78.7 1.8 6E-05 37.0 4.0 29 237-270 103-131 (195)
29 3mlc_A FG41 malonate semialdeh 57.6 26 0.0009 27.4 6.5 68 80-161 37-105 (136)
30 3lp5_A Putative cell surface h 48.5 7.2 0.00024 33.8 1.9 29 134-162 78-106 (250)
31 3fle_A SE_1780 protein; struct 48.1 9.2 0.00031 33.0 2.5 29 134-162 77-105 (249)
32 3m20_A 4-oxalocrotonate tautom 46.5 27 0.00092 23.1 4.2 28 131-158 9-37 (62)
33 3ds8_A LIN2722 protein; unkonw 44.0 14 0.00047 31.2 3.0 29 134-162 74-102 (254)
34 4h5l_A Nucleoprotein; nucleoca 37.5 43 0.0015 29.5 5.1 89 176-276 4-96 (253)
35 2aal_A Malonate semialdehyde d 36.9 1.3E+02 0.0043 22.8 7.4 30 132-161 76-106 (131)
36 3ry0_A Putative tautomerase; o 36.5 66 0.0023 21.2 5.0 28 131-158 10-38 (65)
37 1lbu_A Muramoyl-pentapeptide c 33.1 22 0.00076 29.7 2.5 121 132-273 42-177 (213)
38 1otf_A 4-oxalocrotonate tautom 32.6 44 0.0015 21.5 3.5 27 132-158 11-38 (62)
39 3mb2_A 4-oxalocrotonate tautom 32.4 85 0.0029 21.2 5.1 28 131-158 11-39 (72)
40 2wj6_A 1H-3-hydroxy-4-oxoquina 30.9 28 0.00095 29.4 2.8 27 137-163 76-102 (276)
41 2opa_A Probable tautomerase YW 30.9 44 0.0015 21.4 3.3 27 132-158 11-38 (61)
42 1ehy_A Protein (soluble epoxid 30.6 40 0.0014 28.4 3.8 26 137-162 82-107 (294)
43 1gyx_A YDCE, B1461, hypothetic 30.2 45 0.0015 23.0 3.4 27 132-158 12-39 (76)
44 3fob_A Bromoperoxidase; struct 28.8 38 0.0013 28.1 3.2 27 137-163 77-103 (281)
45 1bax_A M-PMV MA, M-PMV matrix 28.3 1.1E+02 0.0039 22.7 5.3 56 216-275 11-66 (94)
46 3ej9_A Alpha-subunit of trans- 27.5 1.1E+02 0.0037 21.1 5.0 28 131-158 11-39 (76)
47 3abf_A 4-oxalocrotonate tautom 27.5 64 0.0022 20.8 3.6 29 131-159 11-40 (64)
48 3m21_A Probable tautomerase HP 27.1 56 0.0019 21.8 3.3 28 131-158 13-41 (67)
49 3og9_A Protein YAHD A copper i 26.3 49 0.0017 26.1 3.4 29 135-163 81-111 (209)
50 3ia2_A Arylesterase; alpha-bet 25.5 48 0.0016 27.0 3.2 27 137-163 69-95 (271)
51 3b5e_A MLL8374 protein; NP_108 25.5 51 0.0018 26.1 3.4 28 135-162 90-119 (223)
52 1zoi_A Esterase; alpha/beta hy 25.3 58 0.002 26.7 3.8 25 138-162 73-97 (276)
53 2wue_A 2-hydroxy-6-OXO-6-pheny 24.0 69 0.0024 26.9 4.1 27 136-162 88-114 (291)
54 2puj_A 2-hydroxy-6-OXO-6-pheny 23.8 70 0.0024 26.7 4.0 26 137-162 87-112 (286)
55 2ocg_A Valacyclovir hydrolase; 23.7 91 0.0031 25.1 4.7 26 137-162 77-102 (254)
56 3v48_A Aminohydrolase, putativ 23.4 48 0.0016 27.4 2.9 26 137-162 65-90 (268)
57 3d2y_A N-acetylmuramoyl-L-alan 23.2 51 0.0017 28.8 3.1 37 240-277 200-236 (261)
58 1xho_A Chorismate mutase; sout 22.6 66 0.0023 25.9 3.3 48 132-182 45-92 (148)
59 1b6g_A Haloalkane dehalogenase 22.4 56 0.0019 28.0 3.2 26 137-162 99-124 (310)
60 2x5x_A PHB depolymerase PHAZ7; 22.1 61 0.0021 29.3 3.5 30 133-162 107-136 (342)
61 3om8_A Probable hydrolase; str 22.1 58 0.002 27.0 3.1 26 137-162 76-101 (266)
62 3im8_A Malonyl acyl carrier pr 21.8 68 0.0023 28.3 3.7 26 137-162 65-90 (307)
63 4amm_A DYNE8; transferase; 1.4 21.8 65 0.0022 29.7 3.7 26 137-162 151-176 (401)
64 2qez_A Ethanolamine ammonia-ly 21.6 61 0.0021 30.6 3.3 33 133-165 199-232 (455)
65 3ptw_A Malonyl COA-acyl carrie 21.4 69 0.0024 28.8 3.7 26 137-162 66-91 (336)
66 3abq_A Ethanolamine ammonia-ly 21.2 62 0.0021 30.6 3.3 47 104-165 184-231 (453)
67 1isp_A Lipase; alpha/beta hydr 20.9 75 0.0026 24.3 3.4 27 136-162 51-77 (181)
68 3ov9_A Nucleoprotein; orthogon 20.3 1.2E+02 0.0042 26.4 4.8 87 177-276 3-91 (245)
69 2dst_A Hypothetical protein TT 20.3 2.5E+02 0.0084 20.2 8.8 27 137-163 63-89 (131)
70 2xua_A PCAD, 3-oxoadipate ENOL 20.2 68 0.0023 26.3 3.2 26 137-162 75-100 (266)
No 1
>3d2y_A N-acetylmuramoyl-L-alanine amidase AMID; zinc amidase, PGRP, peptidoglycan recognizing protein, AMPD, acetylmuramyl-L-alanine amidase; HET: AH0; 1.75A {Escherichia coli} PDB: 2bh7_A 2wkx_A 2bgx_A* 3d2z_A
Probab=100.00 E-value=7e-63 Score=448.29 Aligned_cols=235 Identities=38% Similarity=0.649 Sum_probs=199.0
Q ss_pred CCCCC-CCCccEEEEEecCCCCHHHHHHHHcCCCCCcceeEEEecCCCCCCCCCcEEEEeecCCccccccCCCCCCCCCC
Q psy13666 26 YDSRD-GMSVKYLILHYTVYNFAHIITAFTSNRAHNLHSSHYVISEKEGKYLPGGKVIQIVPDNMRAWHAGIGKWRRDRN 104 (278)
Q Consensus 26 ~~~R~-~~~i~~IViH~Ta~~~~~s~~~~~~~~~~~~vSaHy~I~~d~~~~~~~G~I~qlV~e~~~AwHAG~s~w~g~~~ 104 (278)
+.+++ +.+|++||||||+++...++++|++ .+||+||+|+++.+...++|+|+|+||++++|||||.|.|.|+.+
T Consensus 20 ~~s~~~~~~i~~IViH~Ta~~~~~~~~~l~~----~~vSaHy~I~~dG~~~~~~~~I~q~v~~~~~AwHAG~s~w~g~~~ 95 (261)
T 3d2y_A 20 RQAQAAYPRIKVLVIHYTADDFDSSLATLTD----KQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATR 95 (261)
T ss_dssp SCCSCCCCSCCEEEEEECSSCHHHHHHHHTS----SSCCCSEEECSSCCEETTEECCEECSCTTSCCSCSCSCEETTEEC
T ss_pred ccCCCCCCCCCEEEEEecCCCCHHHHHHHcC----CCceeEEEEcCCCccccCCCeEEEecCCCceeeeecccccCCCCC
Confidence 44544 6789999999999998888888864 789999999999211122236999999999999999999999999
Q ss_pred CCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCceeecCCcCCCCCCCCCCCCChHHHHHH
Q psy13666 105 LNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQYVLGHTDIAPGSKMDPGPLFPWGKLYLD 184 (278)
Q Consensus 105 ~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~~VvgH~Diap~rK~DPG~~FpW~~L~~~ 184 (278)
+|++|||||+||.|..... .+..+.+||++|+++|++|+++||++|+|++.+|+||+|++|+||.|||+.|||++|+++
T Consensus 96 ~N~~SIGIE~~n~G~~~~~-g~~~~~~~t~aQ~~al~~L~~~L~~~y~i~~~~V~gH~diap~rK~dPG~~f~w~~l~~~ 174 (261)
T 3d2y_A 96 LNDTSIGIELENRGWQKSA-GVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 174 (261)
T ss_dssp GGGGEEEEEECCCCEEEET-TEEEECCCCHHHHHHHHHHHHHHHHHHTCCGGGEEEHHHHSTTTCCTTCTTSCHHHHHHT
T ss_pred CCCCeEEEEEecCCCcccc-CCcCCCCCCHHHHHHHHHHHHHHHHHcCCCcccEecccccCCCCCCCCCCCcCHHHHHHh
Confidence 9999999999998763211 011457899999999999999999999999999999999999999999999999999865
Q ss_pred hCCCCcCCcchhhHHHHHhhcCCCCCCCCCCCHHHHHHHHHHcCCCCCCCC-----hHHHHHHHHhhhccCCCCCcCCCC
Q psy13666 185 YGIGAWLSPDEMTVEAIVRKFKPARPYPRKLDRGIFLELLKAYGYNVTITN-----KRSVIRAFKTHFSANQNPERIYAD 259 (278)
Q Consensus 185 ~gig~w~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~q~~L~~~GY~~~~~~-----~~~~v~aFQ~hf~~~~~~~~~dG~ 259 (278)
|+|+|+++.++ ..++..+ ....+++|..||++|+++||.+ .++ +++||+|||+||| |+.+||+
T Consensus 175 -gig~w~~~~~~--~~~~~~~----~~~~g~~v~~lq~~L~~~GY~~-~dg~~~~~t~~aV~aFQ~~~r----~l~~dGi 242 (261)
T 3d2y_A 175 -GIGAWPDAQRV--NFYLAGR----APHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFR----PTLYNGE 242 (261)
T ss_dssp -TCSCCCCHHHH--HHHHTTC----CTTCBCCHHHHHHHHHHHTCCC-CSSCCHHHHHHHHHHHHHHHC----TTCCSCC
T ss_pred -CcCCCcCcchh--hhhhhcc----ccccchHHHHHHHHHHHcCCCC-CCCccCHHHHHHHHHHHHHcC----CCCCCCC
Confidence 99999988643 2343332 2345789999999999999998 442 4899999999997 8999999
Q ss_pred CChHHHHHHHHHHhhhCC
Q psy13666 260 ITTEDMFWAWALVAKYGS 277 (278)
Q Consensus 260 ~~~~T~a~l~aL~~ky~~ 277 (278)
+|++|+++|.+|++||++
T Consensus 243 ~d~~T~~~L~~l~~ky~~ 260 (261)
T 3d2y_A 243 ADAETQAIAEALLEKYGQ 260 (261)
T ss_dssp CBHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHhccC
Confidence 999999999999999985
No 2
>1j3g_A AMPD protein, AMPD; mixed alpha-beta, hydrolase; NMR {Citrobacter freundii} SCOP: d.118.1.1 PDB: 2y28_A 2y2b_A* 2y2c_A 2y2d_A 2y2e_A
Probab=100.00 E-value=7.8e-42 Score=295.95 Aligned_cols=150 Identities=29% Similarity=0.521 Sum_probs=131.7
Q ss_pred EeeCCCCCCCCCCCCCCC-CCCccEEEEEecCCCC-----HHHHHHHHcC-----------CCCCcceeEEEecCCCCCC
Q psy13666 13 IDPFPEWEKNRNHYDSRD-GMSVKYLILHYTVYNF-----AHIITAFTSN-----------RAHNLHSSHYVISEKEGKY 75 (278)
Q Consensus 13 ~~~~p~~~~~~n~~~~R~-~~~i~~IViH~Ta~~~-----~~s~~~~~~~-----------~~~~~vSaHy~I~~d~~~~ 75 (278)
..++|||| |+.|+ +.+|++||||||+++. ....+++++. +.+.+|||||+|++|
T Consensus 11 ~~~~~spn-----~~~Rp~~~~i~~IVIH~Ta~~~~~~~~~~i~~~~~~~~d~~~~~~~~~~~~~~vs~H~~I~~d---- 81 (187)
T 1j3g_A 11 ARRVPSPH-----YDCRPDDENPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNAHPYFAGIAHLRVSAHCLIRRD---- 81 (187)
T ss_dssp SEECCCSS-----CCCCSCCCCSCCEECCEECCSCSSCCCHHHHHHHHTCCCTTSCHHHHHHTTSCCBCSEEEETT----
T ss_pred CEEecCCC-----CCCCCCCCCCCEEEEEecCCCCccccHHHHHHHHhccccccccchhhccCCCCcceEEEECCC----
Confidence 34678998 78887 7899999999999863 2334445421 135789999999999
Q ss_pred CCCcEEEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCC
Q psy13666 76 LPGGKVIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKP 155 (278)
Q Consensus 76 ~~~G~I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~ 155 (278)
|+|+|+|+++++|||||.|.|.|+.+.|+.|||||+|+.+ ..+||++|+++|++|+++||++|+|++
T Consensus 82 ---G~I~q~v~~~~~awHaG~s~~~g~~~~N~~SIGIe~~g~~----------~~~~t~aQ~~al~~L~~~l~~~y~i~~ 148 (187)
T 1j3g_A 82 ---GEIVQYVPFDKRAWHAGVSSYQGRERCNDFSIGIELEGTD----------TLAYTDAQYQQLAAVTNALITRYPAIA 148 (187)
T ss_dssp ---TEEEECSCSSSCCBCSSCEEETTEEESSCCSCCCEEECST----------TCCCCTHHHHHHHHHHHHHHHHSTTGG
T ss_pred ---CEEEEecCCCCEEeccccccCCCCCCCCCCEEEEEEEcCC----------CCCCCHHHHHHHHHHHHHHHHHcCCCh
Confidence 9999999999999999999999999999999999999642 368999999999999999999999999
Q ss_pred CceeecCCcCCCCCCCCCCCCChHHHHHH
Q psy13666 156 QYVLGHTDIAPGSKMDPGPLFPWGKLYLD 184 (278)
Q Consensus 156 ~~VvgH~Diap~rK~DPG~~FpW~~L~~~ 184 (278)
.+|+||+|++|+||.|||+.|||++|++.
T Consensus 149 ~~I~gH~dv~p~~k~dPG~~f~W~~~~~~ 177 (187)
T 1j3g_A 149 NNMTGHCNIAPERKTDPGPSFDWARFRAL 177 (187)
T ss_dssp GCEECSSTTSCTTCSSSSCCSCHHHHHHH
T ss_pred HHEEeHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 99999999999999999999999999875
No 3
>3hma_A N-acetylmuramoyl-L-alanine amidase XLYA; endolysin, cell WALL biogenesis/degradation, compet hydrolase, secreted, sporulation; 2.20A {Bacillus subtilis} PDB: 3rdr_A 3hmb_A
Probab=100.00 E-value=1.2e-37 Score=262.67 Aligned_cols=132 Identities=23% Similarity=0.358 Sum_probs=114.9
Q ss_pred CCCCCC--CCccEEEEEecCCCCHH-----HHHHHHcCCCCCcceeEEEecCCCCCCCCCcEEEEeecCCccccccCCCC
Q psy13666 26 YDSRDG--MSVKYLILHYTVYNFAH-----IITAFTSNRAHNLHSSHYVISEKEGKYLPGGKVIQIVPDNMRAWHAGIGK 98 (278)
Q Consensus 26 ~~~R~~--~~i~~IViH~Ta~~~~~-----s~~~~~~~~~~~~vSaHy~I~~d~~~~~~~G~I~qlV~e~~~AwHAG~s~ 98 (278)
...|++ .+|++||||+|+++... .+++|++ +..+||+||+|+ | |+|+|+||++++|||||.|
T Consensus 16 ~~~Rpg~~~~~~~IViH~Ta~~~~~a~A~~~~~~~~~--~~~~vsaHy~I~-d-------G~I~q~v~~~~~AwHaG~~- 84 (157)
T 3hma_A 16 ANNRPGYAMTPLYITVHNTANTAVGADAAAHARYLKN--PDTTTSWHFTVD-D-------TEIYQHLPLNENGWHAGDG- 84 (157)
T ss_dssp CTTCCCCBCCCCEEEEEECCCCCTTCSHHHHHHHHTS--TTCCCCCSEEEC-S-------SCEEECSCTTBCCSCSSST-
T ss_pred CCCCCCCCCCCCEEEEEeCCCCCchhhHHHHHHHHhC--CCCCEEEEEEEE-C-------CEEEEecCccceeeeccCC-
Confidence 456664 48999999999998642 4667754 678999999999 8 9999999999999999987
Q ss_pred CCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCceeecCCcCCCCCCCCCCCCC-
Q psy13666 99 WRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQYVLGHTDIAPGSKMDPGPLFP- 177 (278)
Q Consensus 99 w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~~VvgH~Diap~rK~DPG~~Fp- 177 (278)
..+.|+.|||||+|+.+. .+|+++| +++++|+++||++|+|++.+|+||+|++ ||.|||+.|.
T Consensus 85 ---~~~~N~~SIGIE~~~~~~----------~~~~~a~-~a~~~L~~~l~~~y~i~~~~V~gH~di~--~k~cPg~~~~~ 148 (157)
T 3hma_A 85 ---NGSGNRASIGIEICENAD----------GDFAKAT-ANAQWLIKTLMAEHNISLANVVPHKYWS--GKECPRKLLDT 148 (157)
T ss_dssp ---TSHHHHSEEEEEECCCTT----------SCHHHHH-HHHHHHHHHHHHHTTCCGGGEEEHHHHH--CCCCSTTTGGG
T ss_pred ---CCCCCCCeeEEEEEeCCC----------CChHHHH-HHHHHHHHHHHHHcCCCHHHEEeccccC--CCCCccHHHHH
Confidence 257899999999997642 3799999 9999999999999999999999999995 7999999997
Q ss_pred hHHHHHH
Q psy13666 178 WGKLYLD 184 (278)
Q Consensus 178 W~~L~~~ 184 (278)
|++|++.
T Consensus 149 W~~f~~~ 155 (157)
T 3hma_A 149 WDSFKAG 155 (157)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999764
No 4
>1yb0_A Prophage lambdaba02, N-acetylmuramoyl-L-alanine amidase, family 2; PLYL, E.C.3.5.1.28, hydrolase; 1.86A {Bacillus anthracis} SCOP: d.118.1.1 PDB: 2ar3_A 2l47_A
Probab=100.00 E-value=4.6e-36 Score=253.31 Aligned_cols=141 Identities=20% Similarity=0.262 Sum_probs=117.3
Q ss_pred eeCCCCCCCCCCCCCCC--CCCccEEEEEecCCCC-HH-HHHHHHcCCCCCcceeEEEecCCCCCCCCCcEEEEeecCCc
Q psy13666 14 DPFPEWEKNRNHYDSRD--GMSVKYLILHYTVYNF-AH-IITAFTSNRAHNLHSSHYVISEKEGKYLPGGKVIQIVPDNM 89 (278)
Q Consensus 14 ~~~p~~~~~~n~~~~R~--~~~i~~IViH~Ta~~~-~~-s~~~~~~~~~~~~vSaHy~I~~d~~~~~~~G~I~qlV~e~~ 89 (278)
..+|+++ |..|+ ..+|++||||+|+++. +. ...+|++ +..+||+||+|+ | |+|+|+||+++
T Consensus 6 ~~v~~~~-----~~~r~~~~~~~~~IViH~Ta~~~~a~~~~~~~~~--~~~~vs~Hy~I~-d-------g~i~q~v~~~~ 70 (159)
T 1yb0_A 6 KLVVPSK-----YGTKCPYTMKPKYITVHNTYNDAPAENEVNYMIT--NNNEVSFHVAVD-D-------KQAIQGIPWER 70 (159)
T ss_dssp CCCCGGG-----HHHHCCSBCCCCEEEEEECSSCCCHHHHHHHHHH--SCSSCCCSEEEC-S-------SCEEECSCTTB
T ss_pred EEecCCC-----CCCCCCCCCCCCEEEEeeCCCchHHHHHHHHHhC--CCCCEEEEEEEe-C-------CeEEEEecCCc
Confidence 4467777 66665 5789999999999973 33 3466665 568999999999 8 99999999999
Q ss_pred cccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCceeecCCcCCCCC
Q psy13666 90 RAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQYVLGHTDIAPGSK 169 (278)
Q Consensus 90 ~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~~VvgH~Diap~rK 169 (278)
+|||||.+. .+.|+.|||||+|+.+.. ..+|++ |++++++|+++||++|+|++++|+||+|++ ||
T Consensus 71 ~awHaG~~~----~~~N~~SIGIE~~~~~~~--------~~~~~~-~~~~~~~L~~~l~~~y~i~~~~I~gH~di~--~k 135 (159)
T 1yb0_A 71 NAWACGDGN----GPGNRESISVEICYSKSG--------GDRYYK-AENNAVDVVRQLMSMYNIPIENVRTHQSWS--GK 135 (159)
T ss_dssp CCSCSSCSS----SHHHHHEEEEEETTTTTC--------HHHHHH-HHHHHHHHHHHHHHHHTCCGGGEEEHHHHH--CC
T ss_pred cEEEeCCCC----CCCCcCEEEEEEEeeCCC--------CCChHH-HHHHHHHHHHHHHHHhCCChhhEEccccCC--CC
Confidence 999999863 258999999999976421 125654 899999999999999999999999999996 79
Q ss_pred CCCCCCCC---hHHHHHH
Q psy13666 170 MDPGPLFP---WGKLYLD 184 (278)
Q Consensus 170 ~DPG~~Fp---W~~L~~~ 184 (278)
.|||+.|+ |++|++.
T Consensus 136 ~cPg~~~~~~~W~~f~~~ 153 (159)
T 1yb0_A 136 YCPHRMLAEGRWGAFIQK 153 (159)
T ss_dssp CCSHHHHHTTCHHHHHHH
T ss_pred CCCcccccCCcHHHHHHH
Confidence 99999998 9999765
No 5
>1lba_A T7 lysozyme; hydrolase(acting on linear amides); 2.20A {Enterobacteria phage T7} SCOP: d.118.1.1 PDB: 1aro_L
Probab=99.97 E-value=1.2e-30 Score=217.21 Aligned_cols=135 Identities=20% Similarity=0.251 Sum_probs=109.1
Q ss_pred CCCccEEEEEecCCCCH-----HHHHHHHcCCCCCcceeEEEecCCCCCCCCCcEEEEeecCCccccccCCCCCCCCCCC
Q psy13666 31 GMSVKYLILHYTVYNFA-----HIITAFTSNRAHNLHSSHYVISEKEGKYLPGGKVIQIVPDNMRAWHAGIGKWRRDRNL 105 (278)
Q Consensus 31 ~~~i~~IViH~Ta~~~~-----~s~~~~~~~~~~~~vSaHy~I~~d~~~~~~~G~I~qlV~e~~~AwHAG~s~w~g~~~~ 105 (278)
..+|++||||||+++.. .++..+...+.+.+|||||+|++| |+|||+|+++.+||||| +.
T Consensus 4 ~~~i~~IVIH~Ta~~~~~~~~~~~i~~~h~~~g~~~isyHflI~~d-------G~I~q~~~~~~~g~Ha~--------~~ 68 (146)
T 1lba_A 4 RESTDAIFVHCSATKPSQNVGVREIRQWHKEQGWLDVGYHFIIKRD-------GTVEAGRDEMAVGSHAK--------GY 68 (146)
T ss_dssp CSCCCEEEEEECCBCTTCCCCHHHHHHHHHHTTCSSCSCSEEECTT-------SCEEECSCTTBCCSSST--------TC
T ss_pred CCCCCEEEEecCCCCCCccccHHHHHHHHHhCCCCCcCceEEECCC-------CEEEECCCCcceeCccC--------Cc
Confidence 45799999999999753 455444322467899999999999 99999999999999995 58
Q ss_pred CCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCceeecCCcCCCCCCCCCCCCChHHHHHHh
Q psy13666 106 NSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQYVLGHTDIAPGSKMDPGPLFPWGKLYLDY 185 (278)
Q Consensus 106 N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~~VvgH~Diap~rK~DPG~~FpW~~L~~~~ 185 (278)
|+.|||||+++. +.. .+....+||++|+++|+.|+++|+++|++ .+|+||+|++| |.||| |+|.++.++
T Consensus 69 N~~SIGIe~~G~-~~~---~g~~~~~~t~aq~~al~~Li~~l~~~yp~--~~I~gH~d~~~--k~cPg--~~~~~~~~~- 137 (146)
T 1lba_A 69 NHNSIGVCLVGG-IDD---KGKFDANFTPAQMQSLRSLLVTLLAKYEG--AVLRAHHEVAP--KACPS--FDLKRWWEK- 137 (146)
T ss_dssp GGGEEEEEESCB-BCT---TSCBCCCCCHHHHHHHHHHHHHHHHHSTT--CEEEEGGGTSS--SCTTS--BCHHHHHHH-
T ss_pred CCCeEEEEEEcC-ccc---CCccCCCCcHHHHHHHHHHHHHHHHHCCC--CEEEeccCCCC--CCCCC--hhHHHHHHh-
Confidence 999999999953 111 11235789999999999999999999965 78999999998 78876 899999876
Q ss_pred CCCCcCC
Q psy13666 186 GIGAWLS 192 (278)
Q Consensus 186 gig~w~~ 192 (278)
+..+.+
T Consensus 138 -~~~~~~ 143 (146)
T 1lba_A 138 -NELVTS 143 (146)
T ss_dssp -CCCCBC
T ss_pred -CCcccc
Confidence 344443
No 6
>3lat_A Bifunctional autolysin; amidase, ATLE, peptidoglycan hydrolase, cell WALL biogenesis/degradation, multifunctional enzyme, secreted; 1.70A {Staphylococcus epidermidis}
Probab=99.97 E-value=2e-31 Score=234.45 Aligned_cols=132 Identities=18% Similarity=0.269 Sum_probs=108.6
Q ss_pred CCCCC-CCCccEEEEEecCCCCH---HHHHHHHcCCCCCcceeEEEecCCCCCCCCCcEEEEeecCCccccccCCCCCCC
Q psy13666 26 YDSRD-GMSVKYLILHYTVYNFA---HIITAFTSNRAHNLHSSHYVISEKEGKYLPGGKVIQIVPDNMRAWHAGIGKWRR 101 (278)
Q Consensus 26 ~~~R~-~~~i~~IViH~Ta~~~~---~s~~~~~~~~~~~~vSaHy~I~~d~~~~~~~G~I~qlV~e~~~AwHAG~s~w~g 101 (278)
+..|. ..+|++||||+|+++.+ ..+++|.+ +..+||+||+|+ | |+|+|+||++++|||||
T Consensus 45 ~~yR~G~~~p~~IVIH~Ta~~~~tA~~~~~y~~~--~~~~vSaHy~Vd-d-------g~I~Q~Vp~~~~AWHAG------ 108 (213)
T 3lat_A 45 YGYRNGVGRPEGIVVHDTANDNSTIDGEIAFMKR--NYTNAFVHAFVD-G-------NRIIETAPTDYLSWGAG------ 108 (213)
T ss_dssp CCBTTBTTCCCEEEEEECSCSSCCHHHHHHHHHH--TTTTCBCSEEEC-S-------SCEEECSCTTSCCBSSH------
T ss_pred CCCCCCCCCCCEEEEEeCCCCCHHHHHHHHHHhC--CCCCEEEEEEEE-C-------CEEEEecChhheeeccC------
Confidence 45565 56999999999999863 34667765 557899999998 7 89999999999999998
Q ss_pred CCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCc--------eeecCCcC----CCCC
Q psy13666 102 DRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQY--------VLGHTDIA----PGSK 169 (278)
Q Consensus 102 ~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~~--------VvgH~Dia----p~rK 169 (278)
..+|+.|||||||+.+. .++.++|++++++|+++||++|+|++++ |++|.+++ .+++
T Consensus 109 -~~~N~~SIGIEl~~~~~----------~~~f~~qy~~~a~L~a~L~~~y~I~~~~~H~d~~G~I~~H~~vs~~~ggtdH 177 (213)
T 3lat_A 109 -PYGNQRFINVEIVHTHD----------YDSFARSMNNYADYAATQLQYYNLKPDSAENDGRGTVWTHAAISNFLGGTDH 177 (213)
T ss_dssp -HHHHTTEEEEEECCCCS----------HHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTTSCSSEEEHHHHHHHTCSCCC
T ss_pred -CCCCCCeeEEEEecCCC----------cccHHHHHHHHHHHHHHHHHHcCCCccccccccCCCCcChHHHhcccCCCCC
Confidence 25899999999997642 1234689999999999999999999986 99999985 2489
Q ss_pred CCCCCCC-----ChHHHHHH
Q psy13666 170 MDPGPLF-----PWGKLYLD 184 (278)
Q Consensus 170 ~DPG~~F-----pW~~L~~~ 184 (278)
.|||+.| .|++|++.
T Consensus 178 tDPg~y~~~~G~s~~qf~~~ 197 (213)
T 3lat_A 178 ADPHQYLRSHNYSYAELYDL 197 (213)
T ss_dssp CTTHHHHHHTTCCHHHHHHH
T ss_pred CCcHHHHHHcCCCHHHHHHH
Confidence 9999865 47777643
No 7
>2cb3_A Peptidoglycan-recognition protein-LE; PGRP, tracheal cytotoxin, innate immunity, immune system; HET: MLD; 2.40A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=99.96 E-value=9.5e-30 Score=217.96 Aligned_cols=140 Identities=15% Similarity=0.146 Sum_probs=111.1
Q ss_pred ceEeeCCCCCCCCCC-CCCCCCCCccEEEEEecCCCCH----------HHHH-HHHcCCCCCcceeEEEecCCCCCCCCC
Q psy13666 11 YVIDPFPEWEKNRNH-YDSRDGMSVKYLILHYTVYNFA----------HIIT-AFTSNRAHNLHSSHYVISEKEGKYLPG 78 (278)
Q Consensus 11 ~~~~~~p~~~~~~n~-~~~R~~~~i~~IViH~Ta~~~~----------~s~~-~~~~~~~~~~vSaHy~I~~d~~~~~~~ 78 (278)
+.|+++..|...+.. ...+...+|++||||||+++.. ..+. ++++.+.+..|||||+|++|
T Consensus 5 ~~iv~R~~Wga~~~~~~~~~~~~~v~~iVIHhTa~~~~~~~~~~~~~~~~i~~~h~~~~gw~digyhflI~~d------- 77 (175)
T 2cb3_A 5 SAIIPRSSWLAQKPMDEPLPLQLPVKYVVILHTATESSEKRAINVRLIRDMQSFHIESRGWNDIAYNFLVGCD------- 77 (175)
T ss_dssp TTSBCGGGGTCCCCSSCCCBCCSSEEEEEEEECSSCCCSSHHHHHHHHHHHHHHHHHTSCCSSCSCSEEECTT-------
T ss_pred CeEEeHHHcCCCCCcCcccccCCCCCEEEEEECCCCCCccHHHHHHHHHHHHHHHHhcCCCCccCceEEECCC-------
Confidence 456777778732221 1222256899999999999742 1232 33334567899999999999
Q ss_pred cEEEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-c
Q psy13666 79 GKVIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQ-Y 157 (278)
Q Consensus 79 G~I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~-~ 157 (278)
|+|||+++++.++||+ .+.|+.|||||+++. + ...++|++|+++|+.|++.||++|.|.|. +
T Consensus 78 G~I~egr~~~~~gaH~--------~~~N~~SIGIe~~G~-~--------~~~~pt~aQ~~al~~L~~~~~~~~~i~p~~~ 140 (175)
T 2cb3_A 78 GNIYEGRGWKTVGAHT--------LGYNRISLGISFIGC-F--------MKELPTADALNMCRNLLARGVEDGHISTDYR 140 (175)
T ss_dssp SCEEESSCTTBCCSSS--------TTTGGGEEEEEESSC-C--------SSSCCCHHHHHHHHHHHHHHHHHTSEEEEEE
T ss_pred CEEEECCCCCcccccC--------CCcCCCeEEEEEECC-C--------CCCCCCHHHHHHHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999 468999999999952 1 22567999999999999999999999887 8
Q ss_pred eeecCCcCCCCCCCCCCCC
Q psy13666 158 VLGHTDIAPGSKMDPGPLF 176 (278)
Q Consensus 158 VvgH~Diap~rK~DPG~~F 176 (278)
|+||+|++| |.|||+.|
T Consensus 141 I~GH~d~~~--k~cPG~~~ 157 (175)
T 2cb3_A 141 LICHCQCNS--TESPGRRL 157 (175)
T ss_dssp EEEGGGTSS--SCTTCHHH
T ss_pred EEEecCCCC--CCCCHHHH
Confidence 999999998 99999776
No 8
>1sk4_A Peptidoglycan recognition protein I-alpha; alpha/beta MIX, immune system; 1.65A {Homo sapiens} SCOP: d.118.1.1 PDB: 2aph_A* 1sk3_A* 1twq_A* 2eav_A 2eax_A*
Probab=99.96 E-value=2.5e-29 Score=212.92 Aligned_cols=137 Identities=20% Similarity=0.313 Sum_probs=109.5
Q ss_pred EeeCCCCCCCCCCCCCCCCCCccEEEEEecCCCCH----------HHH-HHHHcCCCCCcceeEEEecCCCCCCCCCcEE
Q psy13666 13 IDPFPEWEKNRNHYDSRDGMSVKYLILHYTVYNFA----------HII-TAFTSNRAHNLHSSHYVISEKEGKYLPGGKV 81 (278)
Q Consensus 13 ~~~~p~~~~~~n~~~~R~~~~i~~IViH~Ta~~~~----------~s~-~~~~~~~~~~~vSaHy~I~~d~~~~~~~G~I 81 (278)
|+....|...+... .+...+|++||||||+++.. ..+ +++++.+.+..|||||+|++| |+|
T Consensus 3 iv~r~~Wga~~~~~-~~~~~~v~~iVIHhTa~~~~~~~~~~~~~~~~i~~~h~~~~g~~digyhflI~~d-------G~I 74 (163)
T 1sk4_A 3 IIKRSAWEARETHC-PKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQD-------GGV 74 (163)
T ss_dssp CBCGGGGTCCCCCC-CBCCSSEEEEEEEECCSCCCSSHHHHHHHHHHHHHHHHHTSCCSSCSCSEEECTT-------SCE
T ss_pred EechhhhCCCCCCC-CCcCCCCCEEEEEECCCCCCccHHHHHHHHHHHHHHHHhcCCCCCcCceEEECCC-------CEE
Confidence 55666676333222 22367899999999999752 122 233334577899999999999 999
Q ss_pred EEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-ceee
Q psy13666 82 IQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQ-YVLG 160 (278)
Q Consensus 82 ~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~-~Vvg 160 (278)
||+++++.++||+ .+.|+.|||||+++. + ...++|++|+++|+.|++.||+++.|.|. +|+|
T Consensus 75 ~egr~~~~~gaH~--------~g~N~~SIGIe~~G~-~--------~~~~pt~aQ~~al~~L~~~~~~~~~~~p~~~i~G 137 (163)
T 1sk4_A 75 YEGVGWHIQGSHT--------YGFNDIALGIAFIGY-F--------VEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMG 137 (163)
T ss_dssp EESSCTTBCCCSS--------TTCTTTEEEEEESSC-C--------SSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEEEE
T ss_pred EEcCCCCcccccc--------CCcCCCeEEEEEecC-C--------CCCCCCHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Confidence 9999999999999 469999999999952 1 23578999999999999999999998776 8999
Q ss_pred cCCcCCCCCCCCCCCC
Q psy13666 161 HTDIAPGSKMDPGPLF 176 (278)
Q Consensus 161 H~Diap~rK~DPG~~F 176 (278)
|+|++| |.|||+.|
T Consensus 138 H~d~~~--k~cPG~~~ 151 (163)
T 1sk4_A 138 HSDVVN--ILSPGQAL 151 (163)
T ss_dssp GGGSTT--SCCTTSHH
T ss_pred eeCCCC--CCCCHHHH
Confidence 999998 99999766
No 9
>2rkq_A Peptidoglycan-recognition protein-SD; innate immunity, TOLL, pattern recognition, PGRP, glycoprotein, immune response, secreted,; 1.50A {Drosophila melanogaster}
Probab=99.96 E-value=1.3e-29 Score=215.87 Aligned_cols=139 Identities=18% Similarity=0.194 Sum_probs=111.0
Q ss_pred eEeeCCCCCCCCCCCCCCC-CCCccEEEEEecCCCCH----------HHHH-HHHcCCCCCcceeEEEecCCCCCCCCCc
Q psy13666 12 VIDPFPEWEKNRNHYDSRD-GMSVKYLILHYTVYNFA----------HIIT-AFTSNRAHNLHSSHYVISEKEGKYLPGG 79 (278)
Q Consensus 12 ~~~~~p~~~~~~n~~~~R~-~~~i~~IViH~Ta~~~~----------~s~~-~~~~~~~~~~vSaHy~I~~d~~~~~~~G 79 (278)
.|+....|...+......+ ..+|++||||||+++.. ..+. ++.+.+.+..|||||+|++| |
T Consensus 3 ~iv~r~~Wga~~~~~~~~~~~~~v~~iVIHhTa~~~~~~~~~~~~~~~~i~~~h~~~~g~~digyhflI~~d-------G 75 (169)
T 2rkq_A 3 PIVTRAEWNAKPPNGAIDSMVTPLPRAVIAHTAGGACADDVTCSQHMRNLQNFQMSKQKFSDIGYHYLIGGN-------G 75 (169)
T ss_dssp CEECTGGGTCCCCCSCCCBCCSSEEEEEEEECCSCCCCSHHHHHHHHHHHHHHHHHTSCCSSCSCSEEECTT-------S
T ss_pred cEEeHhhhCCCCCCCcccccCCCCCEEEEEECCCCCCcCHHHHHHHHHHHHHHHHhcCCCCccCCcEEECCC-------C
Confidence 5777778874333332223 67899999999999742 1232 33334567899999999999 9
Q ss_pred EEEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCC-Cce
Q psy13666 80 KVIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKP-QYV 158 (278)
Q Consensus 80 ~I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~-~~V 158 (278)
+|||+++++.++||+ .+.|+.|||||+++. + ...++|++|+++|+.|+++||++|+|.| .+|
T Consensus 76 ~I~~gr~~~~~gah~--------~g~N~~SIGIe~~G~-~--------~~~~pt~aq~~al~~L~~~l~~~~~i~p~~~I 138 (169)
T 2rkq_A 76 KVYEGRSPSQRGAFA--------GPNNDGSLGIAFIGN-F--------EERAPNKEALDAAKELLEQAVKQAQLVEGYKL 138 (169)
T ss_dssp CEEECSCTTBCCSSS--------GGGCTTEEEEEESSC-C--------SSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred EEEEcCCCCcccccc--------CCcCCCeEEEEEEcC-C--------CCCCCCHHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 999999999999999 358999999999942 1 2347899999999999999999999976 599
Q ss_pred eecCCcCCCCCCCCCCCC
Q psy13666 159 LGHTDIAPGSKMDPGPLF 176 (278)
Q Consensus 159 vgH~Diap~rK~DPG~~F 176 (278)
+||+|++| |.|||+.|
T Consensus 139 ~GH~d~~~--k~cPG~~~ 154 (169)
T 2rkq_A 139 LGHRQVSA--TKSPGEAL 154 (169)
T ss_dssp EEGGGTSS--SCTTCHHH
T ss_pred EEeeCCCC--CCCCHHHH
Confidence 99999998 99999766
No 10
>2xz4_A Peptidoglycan-recognition protein LF; immune system, innate immunity; HET: 1PG; 1.72A {Drosophila melanogaster}
Probab=99.96 E-value=1.4e-29 Score=217.71 Aligned_cols=142 Identities=15% Similarity=0.199 Sum_probs=113.4
Q ss_pred CCceEeeCCCCCCCCCCCCCC-CCCCccEEEEEecCCCCH----------HHH-HHHHcCCCCCcceeEEEecCCCCCCC
Q psy13666 9 PGYVIDPFPEWEKNRNHYDSR-DGMSVKYLILHYTVYNFA----------HII-TAFTSNRAHNLHSSHYVISEKEGKYL 76 (278)
Q Consensus 9 ~g~~~~~~p~~~~~~n~~~~R-~~~~i~~IViH~Ta~~~~----------~s~-~~~~~~~~~~~vSaHy~I~~d~~~~~ 76 (278)
.++.|++...|.........+ ...+|++||||||+++.. ..+ +++++.+.+..|||||+|++|
T Consensus 6 ~~~~iv~R~~Wga~~~~~~~~~~~~~v~~IVIHhTa~~~~~~~~~~~~~~~~i~~~h~~~~gw~digyhflI~~d----- 80 (180)
T 2xz4_A 6 KGLHILDRSEWLGEPPSGKYPHLKLPVSNIIIHHTATEGCEQEDVCIYRMKTIQAFHMKSFGWVDIGYNFLVGGD----- 80 (180)
T ss_dssp ---CEECTTTTTCCCCSSCCCBCCSSEEEEEEEECSSCCCCSHHHHHHHHHHHHHHHHHTSCCSSCSCSEEECTT-----
T ss_pred CCCcEEEHHHhCCCCCCCcCcccCCCCCEEEEEECCCCCCcCHHHHHHHHHHHHHHHHhcCCCCccCceEEECCC-----
Confidence 457899999998444444444 367899999999999742 223 333434577899999999999
Q ss_pred CCcEEEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC
Q psy13666 77 PGGKVIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQ 156 (278)
Q Consensus 77 ~~G~I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~ 156 (278)
|+|||+++++.++||+ .+.|+.|||||+++. + ....+|++|+++|+.|++++|+++.|.|.
T Consensus 81 --G~I~egr~~~~~gaH~--------~g~N~~SIGIe~~G~-~--------~~~~pt~aQ~~al~~Li~~~~~~~~i~p~ 141 (180)
T 2xz4_A 81 --GQIYVGRGWHIQGQHV--------NGYGAISVSIAFIGT-F--------VNMEPPARQIEAAKRLMDEGVRLHRLQPD 141 (180)
T ss_dssp --SCEEESSCSSBCCCCS--------SCCCCSCEEEEESSC-C--------SSSCCCHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred --CEEEECCCCccccccc--------CCcCCCeEEEEEECC-C--------CCCCCcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999 468999999999953 1 12467999999999999999999999764
Q ss_pred -ceeecCCcCCCCCCCCCCCC
Q psy13666 157 -YVLGHTDIAPGSKMDPGPLF 176 (278)
Q Consensus 157 -~VvgH~Diap~rK~DPG~~F 176 (278)
+|+||+|++| |.|||+.|
T Consensus 142 ~~I~GH~d~~~--k~cPG~~~ 160 (180)
T 2xz4_A 142 YHIYAHRQLSP--TESPGQKL 160 (180)
T ss_dssp EEEEEHHHHSS--SCTTCHHH
T ss_pred CEEEEccCCCC--CCCchHHH
Confidence 8999999998 99999765
No 11
>1oht_A CG14704 protein; peptidoglycan-recognition protein-LB isoform 2, hydrolase; HET: TLA; 2.0A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=99.95 E-value=6.2e-29 Score=219.31 Aligned_cols=143 Identities=18% Similarity=0.146 Sum_probs=112.9
Q ss_pred CCCCceEeeCCCCCCCCCCCCCCC-CCCccEEEEEecCCCC-----H------HHHH-HHHcCCCCCcceeEEEecCCCC
Q psy13666 7 GMPGYVIDPFPEWEKNRNHYDSRD-GMSVKYLILHYTVYNF-----A------HIIT-AFTSNRAHNLHSSHYVISEKEG 73 (278)
Q Consensus 7 ~~~g~~~~~~p~~~~~~n~~~~R~-~~~i~~IViH~Ta~~~-----~------~s~~-~~~~~~~~~~vSaHy~I~~d~~ 73 (278)
|...+.|+....|..... ...+. ..+|++||||||+++. + ..+. ++++.+.+..|||||+|++|
T Consensus 9 ~~~~~~iv~R~~Wga~~~-~~~~~~~~~i~~IVIHhTa~~~~~~~~~~~~~~~r~iq~~h~~~~gw~dIgyHflI~~d-- 85 (215)
T 1oht_A 9 GVATARLLSRSDWGARLP-KSVEHFQGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSFGIGGD-- 85 (215)
T ss_dssp ---CCCEECTGGGTCCCC-SCCCBCCSSEEEEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHTSCCSSCSSSEEECTT--
T ss_pred CCCCccEeeHHHcCCCCC-CCcCcCCCCCCEEEEEECCCCCCcccHHHHHHHHHHHHHHhhhccCCCcCcceEEECCC--
Confidence 455688999999983332 22333 7789999999999852 1 2333 33334567899999999999
Q ss_pred CCCCCcEEEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCC
Q psy13666 74 KYLPGGKVIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKI 153 (278)
Q Consensus 74 ~~~~~G~I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I 153 (278)
|+|||+++++.++||+ .+.|+.|||||+++. + ....+|++|+++|+.|+++|+++|.|
T Consensus 86 -----G~I~egR~~~~~GaHa--------~g~N~~SIGIeliG~-~--------~~~~pt~aQ~~al~~Li~~l~~~~~i 143 (215)
T 1oht_A 86 -----GMIYTGRGFNVIGAHA--------PKYNDKSVGIVLIGD-W--------RTELPPKQMLDAAKNLIAFGVFKGYI 143 (215)
T ss_dssp -----SCEEESSCTTBCCSSS--------TTTTTSEEEEEESSC-C--------SSSCCCHHHHHHHHHHHHHHHHTTSE
T ss_pred -----CEEEEccCcccccccc--------CCcCCCeEEEEEecC-C--------CCCCChHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999998 468999999999942 1 12356999999999999999999999
Q ss_pred CCC-ceeecCCcCCCCCCCCCCCC
Q psy13666 154 KPQ-YVLGHTDIAPGSKMDPGPLF 176 (278)
Q Consensus 154 ~~~-~VvgH~Diap~rK~DPG~~F 176 (278)
.|. +|+||+|++| |.|||+.|
T Consensus 144 ~P~~~I~GHrDva~--k~cPG~~l 165 (215)
T 1oht_A 144 DPAYKLLGHRQVRD--TECPGGRL 165 (215)
T ss_dssp EEEEEEEEGGGTSS--SCTTCHHH
T ss_pred CCCCEEEeccCCCC--CCCccHHH
Confidence 765 8999999998 99999755
No 12
>1yck_A Peptidoglycan recognition protein; PGRP-S, innate immunity, pattern recognition proteins, immune syste; 1.70A {Homo sapiens} SCOP: d.118.1.1 PDB: 3mu9_A* 2r2k_A 2z9n_A* 2r90_A* 3c93_A* 3cg9_A* 3cor_A* 3cxa_A* 3c2x_A* 3ng4_A* 3nkw_A* 3nno_A* 3nw3_A* 3o4k_A* 3ogx_A* 3olk_A* 3qj1_A* 3qs0_A* 3qv4_A* 3rt4_A* ...
Probab=99.95 E-value=1.3e-28 Score=210.93 Aligned_cols=147 Identities=22% Similarity=0.267 Sum_probs=113.8
Q ss_pred EeeCCCCCCCCCCCCCCC-CCCccEEEEEecCCCCH----------HHH-HHHHcCCCCCcceeEEEecCCCCCCCCCcE
Q psy13666 13 IDPFPEWEKNRNHYDSRD-GMSVKYLILHYTVYNFA----------HII-TAFTSNRAHNLHSSHYVISEKEGKYLPGGK 80 (278)
Q Consensus 13 ~~~~p~~~~~~n~~~~R~-~~~i~~IViH~Ta~~~~----------~s~-~~~~~~~~~~~vSaHy~I~~d~~~~~~~G~ 80 (278)
|++...|...+. ...++ ..+|++||||||+++.. ..+ +++++.+.+..+||||+|++| |+
T Consensus 12 iv~r~~Wga~~~-~~~~~~~~~v~~IVIHhTa~~~~~~~~~~~~~~~~i~~~h~~~~gw~digyhflI~~d-------G~ 83 (175)
T 1yck_A 12 IVPRNEWKALAS-ECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGED-------GL 83 (175)
T ss_dssp CBCHHHHTCCCC-CCCCBCCSSEEEEEEEECSSCCCCSHHHHHHHHHHHHHHHHHTTCCSSCSCSEEECTT-------SC
T ss_pred EEeHHHcCCCCC-CCcCccCCCCCEEEEEECCCCCCcCHHHHHHHHHHHHHHHHhcCCCCccCceEEECCC-------CE
Confidence 555555652222 22344 67899999999999742 122 333434567899999999999 99
Q ss_pred EEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-cee
Q psy13666 81 VIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQ-YVL 159 (278)
Q Consensus 81 I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~-~Vv 159 (278)
|||+++++.++||+| .+.|+.|||||+++. + ....+|++|+++|+.|++.|+++|.|.|. +|+
T Consensus 84 I~egr~~~~~gah~g-------~g~N~~SIGIe~~G~-~--------~~~~pt~aQ~~al~~L~~~~~~~~~i~p~~~I~ 147 (175)
T 1yck_A 84 VYEGRGWNFTGAHSG-------HLWNPMSIGISFMGN-Y--------MDRVPTPQAIRAAQGLLACGVAQGALRSNYVLK 147 (175)
T ss_dssp EEESSTTTBCCSSSC-------TTTGGGEEEEEESSC-C--------SSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEEE
T ss_pred EEECCCccccccccC-------CCCCCCcEEEEEeCC-C--------CCCCCCHHHHHHHHHHHHHHHHhCCCCCCCEEE
Confidence 999999999999997 358999999999942 1 12456999999999999999999999764 999
Q ss_pred ecCCcCCCCCCCCCCCCChHHHHHHhCCCCcCC
Q psy13666 160 GHTDIAPGSKMDPGPLFPWGKLYLDYGIGAWLS 192 (278)
Q Consensus 160 gH~Diap~rK~DPG~~FpW~~L~~~~gig~w~~ 192 (278)
||+|++| |.|||+ .|+++ |+.|+.
T Consensus 148 GH~di~~--k~cPG~-----~~y~~--l~~W~~ 171 (175)
T 1yck_A 148 GHRDVQR--TLSPGN-----QLYHL--IQNWPH 171 (175)
T ss_dssp EGGGTSS--SCTTCH-----HHHHH--HTTSTT
T ss_pred EecCCCC--CCCcHH-----HHHHH--Hhhccc
Confidence 9999998 999996 44554 567864
No 13
>2f2l_X Peptidoglycan recognition protein-LC isoform LCX; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=99.95 E-value=3e-27 Score=200.98 Aligned_cols=140 Identities=17% Similarity=0.258 Sum_probs=110.1
Q ss_pred ceEeeCCCCCCCCCCCCCCC-CCCccEEEEEecCCCCH----------HHHHHH-HcCCCCCcceeEEEecCCCCCCCCC
Q psy13666 11 YVIDPFPEWEKNRNHYDSRD-GMSVKYLILHYTVYNFA----------HIITAF-TSNRAHNLHSSHYVISEKEGKYLPG 78 (278)
Q Consensus 11 ~~~~~~p~~~~~~n~~~~R~-~~~i~~IViH~Ta~~~~----------~s~~~~-~~~~~~~~vSaHy~I~~d~~~~~~~ 78 (278)
|.|+...+|...+....... ..+|++||||||+.+.. .++..+ .+.+.+..+||||+|++|
T Consensus 1 l~iv~R~~WgA~~~~~~~~~~~~~v~~vvIHHta~~~~~~~~~~~~~~r~iq~~H~~~~gw~digyhflI~~d------- 73 (167)
T 2f2l_X 1 MVILKVAEWGGRPAKRMLDAQQLPINRVVISHTAAEGCESREVCSARVNVVQSFHMDSWGWDHIGYNFLVGGD------- 73 (167)
T ss_dssp CCEECGGGGTCCCCSSCCCBCCSSEEEEEEEECSSCCCSSHHHHHHHHHHHHHHHHTTSCCSSCSCSEEECTT-------
T ss_pred CeEEehhhhCCCCCcCcCcccCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCcCceEEECCC-------
Confidence 45777788873221112222 67899999999998631 233333 333567899999999999
Q ss_pred cEEEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-c
Q psy13666 79 GKVIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQ-Y 157 (278)
Q Consensus 79 G~I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~-~ 157 (278)
|+|||+++++.++||| .+.|+.|||||+++. + ....+|++|+++|+.|++.+|+++.|.|. .
T Consensus 74 G~I~egr~~~~~gaHa--------~~~N~~SIGI~~~G~-~--------~~~~pt~aq~~al~~L~~~~~~~~~~~p~~~ 136 (167)
T 2f2l_X 74 GRVYEGRGWDYVGAHT--------KGYNRGSIGISFIGT-F--------TTRKPNERQLEACQLLLQEGVRLKKLTTNYR 136 (167)
T ss_dssp SCEEESSCTTBCCSSS--------TTCSTTCEEEEESSC-C--------SSSCCCHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CEEEEcCCCccccccc--------CCCCCCEEEEEEECC-C--------CCCCCcHHHHHHHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999 368999999999952 1 22467999999999999999999998775 8
Q ss_pred eeecCCcCCCCCCCCCCCC
Q psy13666 158 VLGHTDIAPGSKMDPGPLF 176 (278)
Q Consensus 158 VvgH~Diap~rK~DPG~~F 176 (278)
|+||+|++| |.|||+.|
T Consensus 137 I~GH~d~~~--t~cPG~~~ 153 (167)
T 2f2l_X 137 LYGHRQLSA--TESPGEEL 153 (167)
T ss_dssp EEEGGGTSS--SCTTCHHH
T ss_pred EEEeeCCCC--CCCCHHHH
Confidence 999999998 89999765
No 14
>1sxr_A Peptidoglycan recognition protein SA CG11709-PA; pattern recognition receptor, innate immunity pathway, immune system; 1.56A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=99.94 E-value=3.9e-27 Score=203.13 Aligned_cols=150 Identities=16% Similarity=0.182 Sum_probs=115.2
Q ss_pred eEeeCCCCCCCCCCCCCCCCCCccEEEEEecCCCCH----------HHH-HHHHcCCCCCcceeEEEecCCCCCCCCCcE
Q psy13666 12 VIDPFPEWEKNRNHYDSRDGMSVKYLILHYTVYNFA----------HII-TAFTSNRAHNLHSSHYVISEKEGKYLPGGK 80 (278)
Q Consensus 12 ~~~~~p~~~~~~n~~~~R~~~~i~~IViH~Ta~~~~----------~s~-~~~~~~~~~~~vSaHy~I~~d~~~~~~~G~ 80 (278)
.|+++..|...+.........+|++||||||+++.. ..+ +++++.+.+..|||||+|++| |+
T Consensus 13 ~iv~R~~Wga~~~~~~~~~~~~v~~IVIHhTa~~~~~~~~~~~~~~~~i~~~H~~~~gw~dIgyhflI~~d-------G~ 85 (183)
T 1sxr_A 13 TIKLKRQWGGKPSLGLHYQVRPIRYVVIHHTVTGECSGLLKCAEILQNMQAYHQNELDFNDISYNFLIGND-------GI 85 (183)
T ss_dssp CEECHHHHTCCCCSSCCBCCSSEEEEEEEECSSCCCCHHHHHHHHHHHHHHHHHHTSCCSSCSSSEEECTT-------CC
T ss_pred CEecHHHcCCCCCCCCCccCCCCCEEEEEeCCCCCCcCHHHHHHHHHHHHHHHHhccCCCCCCceEEECCC-------CE
Confidence 467777777332222222367899999999999752 112 233334567899999999999 99
Q ss_pred EEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-cee
Q psy13666 81 VIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQ-YVL 159 (278)
Q Consensus 81 I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~-~Vv 159 (278)
||++++++.+++|+ .+.|+.|||||+++. + ....+|++|+++|+.|++++|+++.|.|. +|+
T Consensus 86 I~egR~~~~~GaH~--------~g~N~~SIGIe~~G~-~--------~~~~Pt~aQ~~al~~Li~~~~~~~~i~p~~~I~ 148 (183)
T 1sxr_A 86 VYEGTGWGLRGAHT--------YGYNAIGTGIAFIGN-F--------VDKLPSDAALQAAKDLLACGVQQGELSEDYALI 148 (183)
T ss_dssp EEESSCTTBCCSSS--------TTSTTTEEEEEESSC-C--------SSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEEE
T ss_pred EEECCCcccccccc--------CCcCCCceEEEEECC-C--------CCCCCCHHHHHHHHHHHHHHHHhCCCCCCCEEE
Confidence 99999988888888 469999999999953 1 11245999999999999999999999874 899
Q ss_pred ecCCcCCCCCCCCCCCCChHHHHHHhCCCCcCCcc
Q psy13666 160 GHTDIAPGSKMDPGPLFPWGKLYLDYGIGAWLSPD 194 (278)
Q Consensus 160 gH~Diap~rK~DPG~~FpW~~L~~~~gig~w~~~~ 194 (278)
||+|++| |.|||+.| +++ |+.|++..
T Consensus 149 GHrdi~~--k~cPG~~~-----y~~--i~~W~~~~ 174 (183)
T 1sxr_A 149 AGSQVIS--TQSPGLTL-----YNE--IQEWPHWL 174 (183)
T ss_dssp EGGGTSS--CCTTCHHH-----HHH--HTTSTTBC
T ss_pred EecCCCC--CCCCHHHH-----HHH--HHHHHhcc
Confidence 9999998 99999765 444 67888664
No 15
>1s2j_A Peptidoglycan recognition protein SA CG11709-PA; mixed beta-sheet, PI-helix (ONE turn), hydrolase; 2.20A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=99.94 E-value=7.5e-27 Score=205.16 Aligned_cols=150 Identities=16% Similarity=0.182 Sum_probs=114.3
Q ss_pred eEeeCCCCCCCCCCCCCCCCCCccEEEEEecCCCCH----------HHH-HHHHcCCCCCcceeEEEecCCCCCCCCCcE
Q psy13666 12 VIDPFPEWEKNRNHYDSRDGMSVKYLILHYTVYNFA----------HII-TAFTSNRAHNLHSSHYVISEKEGKYLPGGK 80 (278)
Q Consensus 12 ~~~~~p~~~~~~n~~~~R~~~~i~~IViH~Ta~~~~----------~s~-~~~~~~~~~~~vSaHy~I~~d~~~~~~~G~ 80 (278)
.|+++..|...+.........+|++||||||+++.. ..+ +++++.+.+..+||||+|++| |+
T Consensus 39 ~iv~R~~Wga~~~~~~~~~~~~v~~IVIHhTa~~~~~~~~~~~~~~r~iq~~H~~~~gw~dIgyHflI~~d-------G~ 111 (209)
T 1s2j_A 39 TIKLKRQWGGKPSLGLHYQVRPIRYVVIHHTVTGECSGLLKCAEILQNMQAYHQNELDFNDISYNFLIGND-------GI 111 (209)
T ss_dssp CCBCTGGGTCCCCSCCCBCCSSEEEEEEEECSSCCCCHHHHHHHHHHHHHHHHHHTSCCSSCSSSEEECTT-------SC
T ss_pred CEeeHHHcCCCCCCCCCccCCCCCEEEEEeCCCCCCcCHHHHHHHHHHHHHHHhhccCccccCCCeEECCC-------Ce
Confidence 467777787332222222367899999999999752 112 233434567899999999999 99
Q ss_pred EEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-cee
Q psy13666 81 VIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQ-YVL 159 (278)
Q Consensus 81 I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~-~Vv 159 (278)
|||+++++..++|+ .+.|+.|||||++|. + ....+|++|+++|+.|+++++++|.|.+. +|+
T Consensus 112 IyegR~w~~~GaH~--------~g~N~~SIGIeliG~-~--------~~~~Pt~aQ~~al~~Li~~~~~~~~l~~~y~I~ 174 (209)
T 1s2j_A 112 VYEGTGWGLRGAHT--------YGYNAIGTGIAFIGN-F--------VDKLPSDAALQAAKDLLACGVQQGELSEDYALI 174 (209)
T ss_dssp EEESSCTTBCCSSS--------TTCSSSEEEEEESSC-C--------SSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEEE
T ss_pred EeeCCCcccccccc--------CCcCCCceEEEEeCC-C--------CCCCCCHHHHHHHHHHHHHHHHhCCCCCCCEEE
Confidence 99988776666666 569999999999953 1 11245999999999999999999999887 899
Q ss_pred ecCCcCCCCCCCCCCCCChHHHHHHhCCCCcCCcc
Q psy13666 160 GHTDIAPGSKMDPGPLFPWGKLYLDYGIGAWLSPD 194 (278)
Q Consensus 160 gH~Diap~rK~DPG~~FpW~~L~~~~gig~w~~~~ 194 (278)
||+|++| |.|||+.| +++ |+.|++..
T Consensus 175 GHrDv~~--k~cPG~~f-----y~~--i~~W~~~~ 200 (209)
T 1s2j_A 175 AGSQVIS--TQSPGLTL-----YNE--IQEWPHWL 200 (209)
T ss_dssp EGGGTSS--SCTTCHHH-----HHH--HTTSTTBC
T ss_pred EecCCCC--CCCCHHHH-----HHH--HHHHhhcc
Confidence 9999998 99999765 444 67888764
No 16
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Probab=99.89 E-value=1.3e-23 Score=178.63 Aligned_cols=148 Identities=16% Similarity=0.157 Sum_probs=109.7
Q ss_pred EeeCCCCCCC-CCCCCCCCCCCccEEEEEecCCCC---H-------HHHHHH-HcCCCCCcceeEEEecCCCCCCCCCcE
Q psy13666 13 IDPFPEWEKN-RNHYDSRDGMSVKYLILHYTVYNF---A-------HIITAF-TSNRAHNLHSSHYVISEKEGKYLPGGK 80 (278)
Q Consensus 13 ~~~~p~~~~~-~n~~~~R~~~~i~~IViH~Ta~~~---~-------~s~~~~-~~~~~~~~vSaHy~I~~d~~~~~~~G~ 80 (278)
|+...+|... +.....+-..+|++||||||+++. . ..+..+ ...+.+..++|||+|++| |+
T Consensus 2 iv~R~~WgA~~~~~~~~~~~~pv~~vvIHhTa~~~~~~~~~~~~~~r~iq~~H~~~~gw~dIGYhflI~~d-------G~ 74 (167)
T 2f2l_A 2 FVERQQWLAQPPQKEIPDLELPVGLVIALPTNSENCSTQAICVLRVRLLQTYDIESSQKCDIAYNFLIGGD-------GN 74 (167)
T ss_dssp EECGGGGTCCCCSSCCCBCCSSEEEEEEEECCSCCCSSHHHHHHHHHHHHHHHHHTSCCSSCSCSEEECTT-------SC
T ss_pred eeehhhhCCCCCCCcccccCCCCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcCCcEEEcCC-------CE
Confidence 5666677622 211112225679999999999864 1 122222 234578999999999999 99
Q ss_pred EEEeecCCccccccCCCCCCCCCC--CCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC-c
Q psy13666 81 VIQIVPDNMRAWHAGIGKWRRDRN--LNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQ-Y 157 (278)
Q Consensus 81 I~qlV~e~~~AwHAG~s~w~g~~~--~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~-~ 157 (278)
||+..+.+....|+ .+ .|+.|||||++ |.. ....+|++|+++|..|++.+++++.|.|. .
T Consensus 75 IyeGR~~~~~GAH~--------~g~~~N~~SiGI~~i--G~~-------~~~~Pt~aq~~al~~Li~~~~~~~~l~p~~~ 137 (167)
T 2f2l_A 75 VYVGRGWNKMGAHM--------NNINYDSQSLSFAYI--GSF-------KTIQPSAKQLSVTRLLLERGVKLGKIAPSYR 137 (167)
T ss_dssp EEESSTTTBCCCSS--------SCHHHHTTCEEEEES--SCC-------SSSCCCHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred EEECCCccccCCCC--------CCCcCCCCcEEEEEE--CCC-------CCCCCCHHHHHHHHHHHHHHHHhCCCCCCCE
Confidence 99877766655565 46 89999999998 332 22467999999999999999999998776 8
Q ss_pred eeecCCcCCCCCCCCCCCCChHHHHHHhCCCCcC
Q psy13666 158 VLGHTDIAPGSKMDPGPLFPWGKLYLDYGIGAWL 191 (278)
Q Consensus 158 VvgH~Diap~rK~DPG~~FpW~~L~~~~gig~w~ 191 (278)
|+||+|++|.+|.|||. .|+++ |..||
T Consensus 138 i~GHrd~~~~~t~cPG~-----~ly~~--l~~wp 164 (167)
T 2f2l_A 138 FTASSKLMPSVTDFKAD-----ALYAS--FANWT 164 (167)
T ss_dssp EEEHHHHCTTCGGGCCH-----HHHHT--TTTCT
T ss_pred EEEeeCCCCCCCcCCHH-----HHHHH--hhhCC
Confidence 99999999988999994 45654 67775
No 17
>3ep1_A PGRP-HD - peptidoglycan recognition protein homologue; immune system, thermophIle, model system; 2.10A {Alvinella pompejana}
Probab=99.71 E-value=7.3e-18 Score=144.00 Aligned_cols=133 Identities=12% Similarity=0.077 Sum_probs=98.7
Q ss_pred eEeeCCCCCCCCCCCCCCCCCCccEEEEEecCCC-C-----------------H---HH-H---HHHHcCCCCCcceeEE
Q psy13666 12 VIDPFPEWEKNRNHYDSRDGMSVKYLILHYTVYN-F-----------------A---HI-I---TAFTSNRAHNLHSSHY 66 (278)
Q Consensus 12 ~~~~~p~~~~~~n~~~~R~~~~i~~IViH~Ta~~-~-----------------~---~s-~---~~~~~~~~~~~vSaHy 66 (278)
.|+.+.+|...+-.....-..++++|||||| +. . + .. + ..+...+.+..++|||
T Consensus 4 ~iv~R~~WgA~~~~~~~~l~~pv~~viIhHT-~~n~~~~~~~~~~~~~~c~~~~~c~~~~vr~iq~~H~~~GW~dIGYhf 82 (176)
T 3ep1_A 4 SIVPRQQWAAIEPRRQIKMNGRADEIFLWQT-GPDTCSLMGLTADKCQGCLQDSSCTEQIVKALQDADFKEGNDDIKYNF 82 (176)
T ss_dssp CCBCGGGGTCCCCSCCCBCSSCEEEEEEEEC-CGGGGTTTC-------CCSSTTSCHHHHHHHHHHHHHHTTCSSCSCSE
T ss_pred ceEcHHHhCCCCCCCccccCCCCCEEEEECC-CCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCcCccE
Confidence 3666677772221122222568999999999 54 2 1 11 2 2222235789999999
Q ss_pred EecCCCCCCCCCcEEEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHH
Q psy13666 67 VISEKEGKYLPGGKVIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKD 146 (278)
Q Consensus 67 ~I~~d~~~~~~~G~I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~ 146 (278)
+|++| |+||+.++.+..+.|+ .+.|..|||||+++. ....++|++|+++++.|++.
T Consensus 83 lI~~d-------G~IyeGR~~~~~GaH~--------~g~N~~SiGI~~iG~---------f~~~~pt~aQl~al~~Ll~~ 138 (176)
T 3ep1_A 83 LIDQD-------GVIYEGRGWGVVGQHT--------KGRDSHSIGVAVIGD---------FGKKEPSQALQDALSKLIIC 138 (176)
T ss_dssp EECTT-------SCEEESSCTTBCCSSS--------TTCCTTEEEEEESSC---------CSSSCCCHHHHHHHHHHHHH
T ss_pred EEcCC-------CEEEECCCCCcccCcc--------CCCCCCeEEEEEECC---------CCCCCChHHHHHHHHHHHHH
Confidence 99999 9999999988888888 468999999999842 12357899999999999999
Q ss_pred HHHHhCCCCC-ceeecCCcCCCCCCCCCCCC
Q psy13666 147 IVSQFKIKPQ-YVLGHTDIAPGSKMDPGPLF 176 (278)
Q Consensus 147 L~~ry~I~~~-~VvgH~Diap~rK~DPG~~F 176 (278)
+++++.|.|. .|+| .+.|||..|
T Consensus 139 ~v~~~~l~p~y~i~G-------~T~CPG~~L 162 (176)
T 3ep1_A 139 GQAAEELSSGARLRT-------TPAMSGQAF 162 (176)
T ss_dssp HHHTTSEEEEEEEEC-------CHHHHCHHH
T ss_pred HHHhCCCCCCCEEEe-------CCCCCHHHH
Confidence 9999998764 6888 389999443
No 18
>2xz8_A Peptidoglycan-recognition protein LF; immune system, innate immunity, PGRP-LF; HET: PG4; 1.94A {Drosophila melanogaster}
Probab=99.65 E-value=5.8e-16 Score=129.13 Aligned_cols=127 Identities=6% Similarity=-0.022 Sum_probs=95.7
Q ss_pred CCceEeeCCCCCCCC-CCCCCCCCCCccEEEEEecCCCCH----------HHHHHH-HcCCCCCcceeEEEecCCCCCCC
Q psy13666 9 PGYVIDPFPEWEKNR-NHYDSRDGMSVKYLILHYTVYNFA----------HIITAF-TSNRAHNLHSSHYVISEKEGKYL 76 (278)
Q Consensus 9 ~g~~~~~~p~~~~~~-n~~~~R~~~~i~~IViH~Ta~~~~----------~s~~~~-~~~~~~~~vSaHy~I~~d~~~~~ 76 (278)
..+.|+...+|...+ ......-..+|++||||||+++.. ..+..+ ...+.+..++|||+|++|
T Consensus 5 ~~~~iv~R~~WgA~~~~~~~~~~~~pv~~vvIHhTat~~~~~~~~c~~~~r~iq~~H~~~~Gw~DIGYnFlI~~d----- 79 (150)
T 2xz8_A 5 ETVKIVTRPYWLAQPPIVPLTPLKLPIESVRFVATNTPSCFTQAECTFRVRLLQNWHIESNGYKDINYNFVAAGD----- 79 (150)
T ss_dssp --CCEECGGGGTCCCCSSCCCBCCSSEEEEEEEECCSCCCCSHHHHHHHHHHHHHHHHHTTCCSSCSCSEEECTT-----
T ss_pred CCCeEEEecccCCCCCCCCCccccCCcCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEcCC-----
Confidence 346788888998332 211112256799999999999631 223333 334678999999999999
Q ss_pred CCcEEEEeecCCccccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC
Q psy13666 77 PGGKVIQIVPDNMRAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQ 156 (278)
Q Consensus 77 ~~G~I~qlV~e~~~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~ 156 (278)
|+||+..+.+....|+. |..||||++++ +|++|+++|..|++..+++..|.|+
T Consensus 80 --G~VyeGRg~~~~GAH~~----------~~~siGI~~iG---------------Pt~~q~~al~~Li~~~v~~g~l~p~ 132 (150)
T 2xz8_A 80 --ENIYEARGWDHSCEPPK----------DADELVVAFIG---------------PSSSNKKIALELIKQGIKLGHISKN 132 (150)
T ss_dssp --SCEEESSCSSBCCCTTS----------CTTEEEEEESS---------------CCHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred --CeEEECCCCCccccccC----------CCCeEEEEEEC---------------CCHHHHHHHHHHHHHHHHhCCcCCC
Confidence 99999999888888883 45799999961 6999999999999999999999876
Q ss_pred -ceeecCCcCCC
Q psy13666 157 -YVLGHTDIAPG 167 (278)
Q Consensus 157 -~VvgH~Diap~ 167 (278)
.|+||+|+.+.
T Consensus 133 y~l~GHrq~~~~ 144 (150)
T 2xz8_A 133 YSLIDDLEKSGS 144 (150)
T ss_dssp EEEEECCCC---
T ss_pred CEEEeecCCCcc
Confidence 89999999754
No 19
>3bkh_A Phikz144, lytic transglycosylase; bacteriophage, endolysin, peptidoglycan, cell WALL degradation, lysozyme, hydrolase; 2.50A {Pseudomonas phage phikz} PDB: 3bkv_A*
Probab=98.08 E-value=2.7e-06 Score=76.78 Aligned_cols=57 Identities=12% Similarity=0.004 Sum_probs=48.3
Q ss_pred CCCCCCHHHHHHHHHHcCCCCC-CCC-----hHHHHHHHHhhhccCCCCCcCCCCCChHHHHHHHHHH
Q psy13666 211 YPRKLDRGIFLELLKAYGYNVT-ITN-----KRSVIRAFKTHFSANQNPERIYADITTEDMFWAWALV 272 (278)
Q Consensus 211 ~~~~~~v~~~q~~L~~~GY~~~-~~~-----~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~aL~ 272 (278)
+..+.+|+.||+.|...||... +++ ++++|++||+.+ ++.+||++|++||..|....
T Consensus 15 G~~g~~V~~lQ~~L~~~Gy~~g~~DG~fg~~T~~AV~~FQ~~~-----gL~~dGivg~~T~~~L~~~~ 77 (268)
T 3bkh_A 15 GDRGDEVCQLQTLLNLCGYDVGKPDGIFGNNTFNQVVKFQKDN-----CLDSDGIVGKNTWAELFSKY 77 (268)
T ss_dssp TCBSHHHHHHHHHHHTTTCCCCSCCSBCCHHHHHHHHHHHHHT-----TSCCSSCBCHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHHHHcCCCCCCCCCccCHHHHHHHHHHHHHh-----CCCCCCcCCHHHHHHHHHhh
Confidence 4667899999999999999873 443 499999999998 79999999999988887543
No 20
>1lbu_A Muramoyl-pentapeptide carboxypeptidase; hydrolase, nuclear receptor; 1.80A {Streptomyces albus} SCOP: a.20.1.1 d.65.1.1
Probab=98.06 E-value=3e-06 Score=73.62 Aligned_cols=56 Identities=7% Similarity=0.030 Sum_probs=47.1
Q ss_pred CCCCCCHHHHHHHHHHcCCC---CCCCC-----hHHHHHHHHhhhccCCCCCcCCCCCChHHHHHHHHH
Q psy13666 211 YPRKLDRGIFLELLKAYGYN---VTITN-----KRSVIRAFKTHFSANQNPERIYADITTEDMFWAWAL 271 (278)
Q Consensus 211 ~~~~~~v~~~q~~L~~~GY~---~~~~~-----~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~aL 271 (278)
+..+++|+.||+.|+.+||. ...++ +++||++||+.+ ++.+||++|++||+.|..+
T Consensus 13 G~~g~~V~~lQ~~L~~~~~~~~~~~~dG~fg~~t~~AV~~FQ~~~-----gL~~dG~vg~~T~~~L~~~ 76 (213)
T 1lbu_A 13 GSSGEAVRQLQIRVAGYPGTGAQLAIDGQFGPATKAAVQRFQSAY-----GLAADGIAGPATFNKIYQL 76 (213)
T ss_dssp TCBSHHHHHHHHHTTTCSCTTCCCCCSSBCCHHHHHHHHHHHHHT-----TSCCSSCBCHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHhcCCcCCCCCCCCCcCHHHHHHHHHHHHHc-----CCCCCCCcCHHHHHHHHHH
Confidence 45678999999999999984 23342 499999999998 7999999999999888765
No 21
>4fet_B Spore cortex-lytic enzyme prepeptide; transglycosylase, cortex hydrolase domain, sodium ION, seMet hydrolase; 1.91A {Bacillus anthracis}
Probab=97.79 E-value=3e-06 Score=74.62 Aligned_cols=56 Identities=13% Similarity=0.013 Sum_probs=0.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCC-CCC-----hHHHHHHHHhhhccCCCCCcCCCCCChHHHHHHHHH
Q psy13666 211 YPRKLDRGIFLELLKAYGYNVT-ITN-----KRSVIRAFKTHFSANQNPERIYADITTEDMFWAWAL 271 (278)
Q Consensus 211 ~~~~~~v~~~q~~L~~~GY~~~-~~~-----~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~aL 271 (278)
+..+.+|+.||+.|+..||... .++ ++++|++||+.+ ++.+||++|++||+.|...
T Consensus 10 G~~g~~V~~lQ~~L~~lGy~~g~~DG~fG~~T~~AV~~FQ~~~-----GL~~DGivg~~T~~aL~~~ 71 (222)
T 4fet_B 10 GASGEDVIELQSRLKYNGFYTGKVDGVFGWGTYWALRNFQEKF-----GLPVDGLAGAKTKQMLVKA 71 (222)
T ss_dssp -------------------------------------------------------------------
T ss_pred CCCcHHHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHc-----CCCCCCCcCHHHHHHHHhc
Confidence 4567899999999999999753 332 499999999998 7999999999999888754
No 22
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=94.71 E-value=0.049 Score=52.02 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHcCCCCCCC----C--hHHHHHHHHhhhccCCCCCcCCCCCChHHHHHHH
Q psy13666 216 DRGIFLELLKAYGYNVTIT----N--KRSVIRAFKTHFSANQNPERIYADITTEDMFWAW 269 (278)
Q Consensus 216 ~v~~~q~~L~~~GY~~~~~----~--~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~ 269 (278)
++...|+-|.+|||..+.. + .+.+|+.||+-| ++.+.|++|.+|.+++.
T Consensus 22 ~~~~a~~yL~~yGYl~~~~~~~~~~~l~~Ai~~~Q~f~-----gL~vTG~LD~~T~~~M~ 76 (425)
T 1l6j_A 22 DRQLAEEYLYRYGYTRVAEMRGESKSLGPALLLLQKQL-----SLPETGELDSATLKAMR 76 (425)
T ss_dssp HHHHHHHHHHHTTCC-----------CHHHHHHHHHHH-----TCCCCSSCCHHHHHHHT
T ss_pred cHHHHHHHHHHcCCCCCcccccchHHHHHHHHHHHHHc-----CCCCCCccCHHHHHHhc
Confidence 3445588999999975421 1 288999999999 89999999999966553
No 23
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=93.74 E-value=0.12 Score=49.19 Aligned_cols=49 Identities=14% Similarity=0.258 Sum_probs=38.5
Q ss_pred CHHHHHHHHHH-cCCCCCCCC---hHHHHHHHHhhhccCCCCCcCCCCCChHHHHHHH
Q psy13666 216 DRGIFLELLKA-YGYNVTITN---KRSVIRAFKTHFSANQNPERIYADITTEDMFWAW 269 (278)
Q Consensus 216 ~v~~~q~~L~~-~GY~~~~~~---~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~ 269 (278)
++...|.-|.+ |||..+... .+.||+.||+-| ++.+.|++|.+|.+++.
T Consensus 15 ~~~~a~~yL~~~yGyl~~~~~~~~~~~Ai~~~Q~f~-----gL~vTG~LD~~T~~~M~ 67 (421)
T 1eak_A 15 DKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQKFF-----GLPQTGDLDQNTIETMR 67 (421)
T ss_dssp HHHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHS-----SCCCCCSCCHHHHHHHT
T ss_pred cHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHc-----CCCCCCccCHHHHHHhc
Confidence 34455889999 999864322 288999999998 89999999999966553
No 24
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=93.41 E-value=0.071 Score=47.40 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=36.3
Q ss_pred HHHHHHHHHHcCCCCCC--------CC--hHHHHHHHHhhhccCCCCCcCCCCCChHHHHHH
Q psy13666 217 RGIFLELLKAYGYNVTI--------TN--KRSVIRAFKTHFSANQNPERIYADITTEDMFWA 268 (278)
Q Consensus 217 v~~~q~~L~~~GY~~~~--------~~--~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l 268 (278)
+..+|.-|.+|||--.. .+ .+.+|+.||+-| ++.+.|++|.+|..++
T Consensus 14 ~~~~~~yL~~~gyl~~~~~~~~~~~~~~~~~~ai~~~Q~~~-----~l~~tG~ld~~t~~~m 70 (255)
T 1slm_A 14 MNLVQKYLENYYDLKKDVKQFVRRKDSGPVVKKIREMQKFL-----GLEVTGKLDSDTLEVM 70 (255)
T ss_dssp --CHHHHHHHHSCCCCC---------CHHHHHHHHHHHHHT-----TCCCCSSCCHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCcccccccccchHHHHHHHHHHHHHc-----CCCCccccCHHHHHHh
Confidence 56678999999997542 12 288999999998 7889999999996554
No 25
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=91.65 E-value=0.28 Score=49.10 Aligned_cols=48 Identities=15% Similarity=0.274 Sum_probs=38.0
Q ss_pred CHHHHHHHHHH-cCCCCCCCC---hHHHHHHHHhhhccCCCCCcCCCCCChHHHHHH
Q psy13666 216 DRGIFLELLKA-YGYNVTITN---KRSVIRAFKTHFSANQNPERIYADITTEDMFWA 268 (278)
Q Consensus 216 ~v~~~q~~L~~-~GY~~~~~~---~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l 268 (278)
++...|+-|++ |||..+... .+.||+.||+-+ ++.+.|++|.+|.+++
T Consensus 17 ~~~~~~~yL~~~ygyl~~~~~~~~~~~al~~~Q~~~-----gL~~TG~lD~~T~~~m 68 (631)
T 1ck7_A 17 DKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQKFF-----GLPQTGDLDQNTIETM 68 (631)
T ss_dssp HHHHHHHHHHHHTCCCTTTCSHHHHHHHHHHHHHHH-----TCCSCSSCCHHHHHHT
T ss_pred cHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHc-----CCCCccccCHHHHHHh
Confidence 34556889999 999764322 288999999999 7999999999996554
No 26
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.71 E-value=0.33 Score=46.48 Aligned_cols=48 Identities=10% Similarity=0.097 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHcCCCCCC--------C-C-hHHHHHHHHhhhccCCCCCcCCCCCChHHHHHH
Q psy13666 216 DRGIFLELLKAYGYNVTI--------T-N-KRSVIRAFKTHFSANQNPERIYADITTEDMFWA 268 (278)
Q Consensus 216 ~v~~~q~~L~~~GY~~~~--------~-~-~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l 268 (278)
++..+|+-|.+|||-... + + .+.+|+.||+-+ ++.+.|.+|.+|.+++
T Consensus 11 ~~~~~~~yL~~~gyl~~~~~~~~~~~~~~~~~~ai~~~Q~~~-----~l~~tG~ld~~t~~~m 68 (450)
T 1su3_A 11 DVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFF-----GLKVTGKPDAETLKVM 68 (450)
T ss_dssp --CHHHHHHHHHSCCC------------CHHHHHHHHHHHHT-----TCCCCSSCCHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCcccccccccchHHHHHHHHHHHHHc-----CCCCccccCHHHHHHh
Confidence 455678999999997531 1 1 288999999998 7889999999996554
No 27
>2ikb_A Hypothetical protein NMB1012; structural genomics, PSI-2, MCSG, PR structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.2.1.9 PDB: 2is5_A*
Probab=85.42 E-value=0.83 Score=38.00 Aligned_cols=31 Identities=6% Similarity=-0.180 Sum_probs=27.0
Q ss_pred ChHHHHHHHHhhhccCCCCCcCCCCCChHHHHHHHH
Q psy13666 235 NKRSVIRAFKTHFSANQNPERIYADITTEDMFWAWA 270 (278)
Q Consensus 235 ~~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~a 270 (278)
|...+|+.||+.. +..+||++|+.|.++|.+
T Consensus 89 G~~~Avk~lQ~~l-----gl~~DGiiGp~Tl~al~~ 119 (167)
T 2ikb_A 89 GYGNAARMLQRAA-----GVPDDGVIGAVSLKAINS 119 (167)
T ss_dssp CHHHHHHHHHHHT-----TSCCSSCCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHc-----CCCcCCCcCHHHHHHHHh
Confidence 5678999999997 788999999999887774
No 28
>2nr7_A Secretion activator protein, putative; APCC85792, porphyromonas gingivalis W83 structural genomics, PSI-2, protein structure initiative; 1.30A {Porphyromonas gingivalis} SCOP: d.2.1.9
Probab=78.69 E-value=1.8 Score=36.97 Aligned_cols=29 Identities=3% Similarity=-0.169 Sum_probs=25.7
Q ss_pred HHHHHHHHhhhccCCCCCcCCCCCChHHHHHHHH
Q psy13666 237 RSVIRAFKTHFSANQNPERIYADITTEDMFWAWA 270 (278)
Q Consensus 237 ~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~a 270 (278)
..+|+.||+.. +..+||++|+.|.++|.+
T Consensus 103 ~~Avk~LQr~l-----gl~~DGiiGp~TlaAl~~ 131 (195)
T 2nr7_A 103 KYGIVIPQRIL-----GVQADGIVGNKTLQAVNS 131 (195)
T ss_dssp THHHHHHHHHH-----TSCCCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHh-----CCCcCCCcCHHHHHHHHc
Confidence 57999999998 688999999999888775
No 29
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=57.64 E-value=26 Score=27.41 Aligned_cols=68 Identities=9% Similarity=-0.083 Sum_probs=39.5
Q ss_pred EEEEeecCCc-cccccCCCCCCCCCCCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCce
Q psy13666 80 KVIQIVPDNM-RAWHAGIGKWRRDRNLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKPQYV 158 (278)
Q Consensus 80 ~I~qlV~e~~-~AwHAG~s~w~g~~~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~~~V 158 (278)
.+++++.+.. .-|-.+..+.++...-+-.-|-|.+. ..-|.+|.++|.+.+.+.++..++++.+|
T Consensus 37 dv~vii~e~~~~~~~~~~~ylg~~rs~~~v~I~I~~~--------------~gRt~EqK~~L~~~it~~l~~lg~~~~~v 102 (136)
T 3mlc_A 37 DRFQILTAHDPSDIIAEDAGLGFQRSPSVVIIHVFTQ--------------AGRTIETKQRVFAAITESLAPIGVAGSDV 102 (136)
T ss_dssp CCEEEEEEECGGGEEECCTTSSCCCCSCCEEEEEEEE--------------TTCCHHHHHHHHHHHHHHHTTTTCCGGGE
T ss_pred HEEEEEEEcCHHHccccccccCcCCCCCeEEEEEEEC--------------CCCCHHHHHHHHHHHHHHHHHcCCCcccE
Confidence 5666665532 24444444444433334444444442 23488999888887777776679998876
Q ss_pred eec
Q psy13666 159 LGH 161 (278)
Q Consensus 159 vgH 161 (278)
.=+
T Consensus 103 ~V~ 105 (136)
T 3mlc_A 103 FIA 105 (136)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 30
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=48.46 E-value=7.2 Score=33.80 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 134 ENQIHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 134 ~aQi~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
+.|.+-+..++..|.++|++.+-.++|||
T Consensus 78 ~~~a~~l~~~~~~l~~~~~~~~~~lvGHS 106 (250)
T 3lp5_A 78 DKQAVWLNTAFKALVKTYHFNHFYALGHS 106 (250)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSEEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 46778899999999999999888999999
No 31
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=48.13 E-value=9.2 Score=33.03 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 134 ENQIHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 134 ~aQi~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
..|.+.+..++..|.++|++.+-.++|||
T Consensus 77 ~~~~~~l~~~i~~l~~~~~~~~~~lvGHS 105 (249)
T 3fle_A 77 KENAYWIKEVLSQLKSQFGIQQFNFVGHS 105 (249)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEC
Confidence 45678899999999999999888999999
No 32
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=46.45 E-value=27 Score=23.14 Aligned_cols=28 Identities=4% Similarity=0.093 Sum_probs=21.9
Q ss_pred CCcHHHHHHHHHHHHHHHHH-hCCCCCce
Q psy13666 131 PFDENQIHTLGLLGKDIVSQ-FKIKPQYV 158 (278)
Q Consensus 131 ~~t~aQi~al~~L~~~L~~r-y~I~~~~V 158 (278)
..|++|.++|.+.+.+++.+ .++++..|
T Consensus 9 grt~eqK~~L~~~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 9 KLDVGKKREFVERLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTCCTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCcCcceE
Confidence 47899999988877777655 79998654
No 33
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=44.04 E-value=14 Score=31.24 Aligned_cols=29 Identities=17% Similarity=0.265 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 134 ENQIHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 134 ~aQi~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
+.+.+.+..++..|+++|++.+-.++|||
T Consensus 74 ~~~a~~l~~~i~~l~~~~~~~~~~lvGHS 102 (254)
T 3ds8_A 74 DDWSKWLKIAMEDLKSRYGFTQMDGVGHS 102 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEC
Confidence 45567788888999999999888999999
No 34
>4h5l_A Nucleoprotein; nucleocapsid protein, N protein, RNA binding, RNP, viral protein; 2.75A {Toscana virus}
Probab=37.52 E-value=43 Score=29.46 Aligned_cols=89 Identities=13% Similarity=0.167 Sum_probs=52.9
Q ss_pred CChHHHHHHhCCCCcCCcchhhHHHHHhhcCCCCCCCCCCCHHHHHHHHHHcCCCCCCC---Ch-HHHHHHHHhhhccCC
Q psy13666 176 FPWGKLYLDYGIGAWLSPDEMTVEAIVRKFKPARPYPRKLDRGIFLELLKAYGYNVTIT---NK-RSVIRAFKTHFSANQ 251 (278)
Q Consensus 176 FpW~~L~~~~gig~w~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~q~~L~~~GY~~~~~---~~-~~~v~aFQ~hf~~~~ 251 (278)
++|+++..+++-..| |..+ ...+.+.|. -.|.|.+.+...|.+.|=....+ |. ..+|-+.=|-.
T Consensus 4 ~~y~~iave~~~~~~-d~~~--i~~~v~~f~-----YqGFDa~~vi~~l~erg~~~g~~~~~D~k~mIVl~ltRGN---- 71 (253)
T 4h5l_A 4 ENYRDIALAFLDESA-DSGT--INAWVNEFA-----YQGFDPKRIVQLVKERGTAKGRDWKKDVKMMIVLNLVRGN---- 71 (253)
T ss_dssp -CHHHHHHHTTSSCC-CHHH--HHHHHHHHS-----BCSSCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCS----
T ss_pred ccHHHHHHHHhcccc-cHHH--HHHHHHHHH-----hcCCCHHHHHHHHHHHhccchhhHHHhHHHHhhhhhhcCC----
Confidence 679999888653333 3222 233344442 13678888888888877322222 21 23333443332
Q ss_pred CCCcCCCCCChHHHHHHHHHHhhhC
Q psy13666 252 NPERIYADITTEDMFWAWALVAKYG 276 (278)
Q Consensus 252 ~~~~~dG~~~~~T~a~l~aL~~ky~ 276 (278)
.+.+.-....++..+++.+|..||.
T Consensus 72 k~~km~~kms~~Gk~~~~~Li~~Y~ 96 (253)
T 4h5l_A 72 KPEAMMKKMSEKGASIVANLISVYQ 96 (253)
T ss_dssp CHHHHHHTSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 3666667788888999999999995
No 35
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=36.91 E-value=1.3e+02 Score=22.79 Aligned_cols=30 Identities=20% Similarity=0.094 Sum_probs=22.3
Q ss_pred CcHHHHHHHHHHHHHHHHH-hCCCCCceeec
Q psy13666 132 FDENQIHTLGLLGKDIVSQ-FKIKPQYVLGH 161 (278)
Q Consensus 132 ~t~aQi~al~~L~~~L~~r-y~I~~~~VvgH 161 (278)
.|.+|.++|.+.+.+++.+ .++++.+|.=+
T Consensus 76 rt~eqK~~l~~~l~~~l~~~lg~~~~~v~I~ 106 (131)
T 2aal_A 76 RSEEQKVCFYKLLTGALERDCGISPDDVIVA 106 (131)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 5888988887777666655 69998877644
No 36
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=36.48 E-value=66 Score=21.20 Aligned_cols=28 Identities=11% Similarity=0.051 Sum_probs=21.1
Q ss_pred CCcHHHHHHHHHHHHHHHHH-hCCCCCce
Q psy13666 131 PFDENQIHTLGLLGKDIVSQ-FKIKPQYV 158 (278)
Q Consensus 131 ~~t~aQi~al~~L~~~L~~r-y~I~~~~V 158 (278)
..|++|.++|.+.+.+.+.+ +++|+..|
T Consensus 10 Grs~eqk~~L~~~it~~~~~~lg~p~~~v 38 (65)
T 3ry0_A 10 GRSPQEVAALGEALTAAAHETLGTPVEAV 38 (65)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCcCcccE
Confidence 36899999888777766665 79987654
No 37
>1lbu_A Muramoyl-pentapeptide carboxypeptidase; hydrolase, nuclear receptor; 1.80A {Streptomyces albus} SCOP: a.20.1.1 d.65.1.1
Probab=33.06 E-value=22 Score=29.75 Aligned_cols=121 Identities=9% Similarity=0.082 Sum_probs=61.7
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCceeecCCcC----CCCCCCCCCCCChHHHHHHhCCCCcCCcchhhH-HHHHhhcC
Q psy13666 132 FDENQIHTLGLLGKDIVSQFKIKPQYVLGHTDIA----PGSKMDPGPLFPWGKLYLDYGIGAWLSPDEMTV-EAIVRKFK 206 (278)
Q Consensus 132 ~t~aQi~al~~L~~~L~~ry~I~~~~VvgH~Dia----p~rK~DPG~~FpW~~L~~~~gig~w~~~~~~~~-~~~~~~~~ 206 (278)
|.+.-. .-++...++++++++-|+|-.-+. ..+...+-+.|.+.+|.. .+-+ |.... +.. +...+..
T Consensus 42 fg~~t~----~AV~~FQ~~~gL~~dG~vg~~T~~~L~~~~~~~~~s~~F~~~E~~~-~~~G-~~g~~-v~~~~~~~n~~- 113 (213)
T 1lbu_A 42 FGPATK----AAVQRFQSAYGLAADGIAGPATFNKIYQLQDDDCTPVNFTYAELNR-CNSD-WSGGK-VSAATARANAL- 113 (213)
T ss_dssp CCHHHH----HHHHHHHHHTTSCCSSCBCHHHHHHHHHHBCTTSSBTTCCTTTTCS-SCSS-CCSSS-SCHHHHHHHHH-
T ss_pred cCHHHH----HHHHHHHHHcCCCCCCCcCHHHHHHHHHHhccccccccccHHHhcc-cccC-CCCCc-CChHHHHHHHH-
Confidence 555443 445778889999988888765432 111222334666666642 2211 22110 000 0000000
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCC-CCCCCC-----h-HHHH---HHHHhhhccCCCCCcCCCCCChHHHHHHHHHHh
Q psy13666 207 PARPYPRKLDRGIFLELLKAYGY-NVTITN-----K-RSVI---RAFKTHFSANQNPERIYADITTEDMFWAWALVA 273 (278)
Q Consensus 207 ~~~~~~~~~~v~~~q~~L~~~GY-~~~~~~-----~-~~~v---~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~aL~~ 273 (278)
.....|+.+...+|+ .+.++. + .++| +.||..+ +..+|+.++..||..|..+..
T Consensus 114 --------~l~~~Le~lr~~~g~~~i~V~sgyR~~~~N~~vgg~~~s~H~~-----G~A~D~~v~~~~~~~l~~~~~ 177 (213)
T 1lbu_A 114 --------VTMWKLQAMRHAMGDKPITVNGGFRSVTCNSNVGGASNSRHMY-----GHAADLGAGSQGFCALAQAAR 177 (213)
T ss_dssp --------HHHHHHHHHHHHTTSCCCCEEECCCCHHHHHHHTCCTTCGGGG-----TCEEEECCTTTCHHHHHHHGG
T ss_pred --------HHHHHHHHHHHhcCCCCeEeccccCCHHHccccCCCCCCCCCC-----ceEeeeCCCCcCHHHHHHHHH
Confidence 001123443447783 333321 1 3344 6788655 899999999999877766543
No 38
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=32.63 E-value=44 Score=21.47 Aligned_cols=27 Identities=15% Similarity=0.049 Sum_probs=20.7
Q ss_pred CcHHHHHHHHHHHHHHHHH-hCCCCCce
Q psy13666 132 FDENQIHTLGLLGKDIVSQ-FKIKPQYV 158 (278)
Q Consensus 132 ~t~aQi~al~~L~~~L~~r-y~I~~~~V 158 (278)
.|++|.++|.+.+.+++.+ .++|+..|
T Consensus 11 rs~e~k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 11 RTDEQKETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCcccE
Confidence 5889998888877776665 69987654
No 39
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=32.38 E-value=85 Score=21.16 Aligned_cols=28 Identities=14% Similarity=0.016 Sum_probs=21.2
Q ss_pred CCcHHHHHHHHHHHHHHHHH-hCCCCCce
Q psy13666 131 PFDENQIHTLGLLGKDIVSQ-FKIKPQYV 158 (278)
Q Consensus 131 ~~t~aQi~al~~L~~~L~~r-y~I~~~~V 158 (278)
..|++|.++|.+.+.+++.+ .++++..|
T Consensus 11 grs~eqK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 11 GRSTEQKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCCcccE
Confidence 36899998888777776655 79997654
No 40
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=30.92 E-value=28 Score=29.41 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecCC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHTD 163 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~D 163 (278)
++.++.-+..+++..+|.+-.++|||-
T Consensus 76 ~~~~a~dl~~ll~~l~~~~~~lvGhSm 102 (276)
T 2wj6_A 76 YQEQVKDALEILDQLGVETFLPVSHSH 102 (276)
T ss_dssp HHHHHHHHHHHHHHHTCCSEEEEEEGG
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECH
Confidence 556677788888999999889999983
No 41
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=30.88 E-value=44 Score=21.43 Aligned_cols=27 Identities=11% Similarity=0.003 Sum_probs=20.5
Q ss_pred CcHHHHHHHHHHHHHHHHH-hCCCCCce
Q psy13666 132 FDENQIHTLGLLGKDIVSQ-FKIKPQYV 158 (278)
Q Consensus 132 ~t~aQi~al~~L~~~L~~r-y~I~~~~V 158 (278)
.+++|.++|.+.+.+++.+ .++++.+|
T Consensus 11 rs~eqk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 11 RTDEQKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCcCeE
Confidence 4889998888777776665 69987654
No 42
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=30.65 E-value=40 Score=28.35 Aligned_cols=26 Identities=19% Similarity=0.369 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
++.++.-+..++++.+|.+-.++|||
T Consensus 82 ~~~~a~dl~~ll~~l~~~~~~lvGhS 107 (294)
T 1ehy_A 82 LDKAADDQAALLDALGIEKAYVVGHD 107 (294)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEET
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 55667778888899999988999998
No 43
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=30.23 E-value=45 Score=22.96 Aligned_cols=27 Identities=22% Similarity=0.267 Sum_probs=20.5
Q ss_pred CcHHHHHHHHHHHHHHHH-HhCCCCCce
Q psy13666 132 FDENQIHTLGLLGKDIVS-QFKIKPQYV 158 (278)
Q Consensus 132 ~t~aQi~al~~L~~~L~~-ry~I~~~~V 158 (278)
++++|.++|.+.+.+++. ..++++++|
T Consensus 12 ls~eqk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 12 LDEQQKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCCceE
Confidence 589999888877776665 479998654
No 44
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=28.75 E-value=38 Score=28.12 Aligned_cols=27 Identities=11% Similarity=0.167 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecCC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHTD 163 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~D 163 (278)
++.++.-+..+++..++.+-.|+|||-
T Consensus 77 ~~~~a~dl~~ll~~l~~~~~~lvGhS~ 103 (281)
T 3fob_A 77 YDTFTSDLHQLLEQLELQNVTLVGFSM 103 (281)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEETT
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEECc
Confidence 345566677888889998889999994
No 45
>1bax_A M-PMV MA, M-PMV matrix protein; core protein, polyprotein, myristylation; NMR {Mason-pfizer monkey virus} SCOP: a.61.1.3 PDB: 2f76_X 2f77_X
Probab=28.35 E-value=1.1e+02 Score=22.72 Aligned_cols=56 Identities=14% Similarity=0.043 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHcCCCCCCCChHHHHHHHHhhhccCCCCCcCCCCCChHHHHHHHHHHhhh
Q psy13666 216 DRGIFLELLKAYGYNVTITNKRSVIRAFKTHFSANQNPERIYADITTEDMFWAWALVAKY 275 (278)
Q Consensus 216 ~v~~~q~~L~~~GY~~~~~~~~~~v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~aL~~ky 275 (278)
-+..||.+|+..|-.|...+..+-..--+.+ -||. | .+|.++.++|..+-.=+.+|
T Consensus 11 fi~~lk~lLk~RgIkVkk~~L~~Ff~fi~~~-cPWF-p--~eGtl~l~~W~kVG~~L~~~ 66 (94)
T 1bax_A 11 YVEQLKQALKTRGVKVKYADLLKFFDFVKDT-CPWF-P--QEGTIDIKRWRRVGDCFQDY 66 (94)
T ss_pred HHHHHHHHHHHcCeeecHHHHHHHHHHHHHh-CCCc-C--cCCcccHHHHHHHHHHHHHH
Confidence 4678999999999888533322222222444 3554 3 46899999998776533333
No 46
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=27.54 E-value=1.1e+02 Score=21.09 Aligned_cols=28 Identities=11% Similarity=-0.014 Sum_probs=21.3
Q ss_pred CCcHHHHHHHHHHHHHHHHH-hCCCCCce
Q psy13666 131 PFDENQIHTLGLLGKDIVSQ-FKIKPQYV 158 (278)
Q Consensus 131 ~~t~aQi~al~~L~~~L~~r-y~I~~~~V 158 (278)
..|++|.++|.+.+.+.+.+ .++|++.|
T Consensus 11 Grs~eqK~~L~~~it~~l~~~lg~p~~~v 39 (76)
T 3ej9_A 11 GRTDEQKRALSAGLLRVISEATGEPRENI 39 (76)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCcCcccE
Confidence 36899999988877777654 79987644
No 47
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=27.47 E-value=64 Score=20.83 Aligned_cols=29 Identities=10% Similarity=-0.106 Sum_probs=20.6
Q ss_pred CCcHHHHHHHHHHHHHHHHH-hCCCCCcee
Q psy13666 131 PFDENQIHTLGLLGKDIVSQ-FKIKPQYVL 159 (278)
Q Consensus 131 ~~t~aQi~al~~L~~~L~~r-y~I~~~~Vv 159 (278)
..+++|.++|.+-+.+++.+ .++++..|.
T Consensus 11 g~s~eqk~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 11 GRPPEKKRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCCcccEE
Confidence 36888888877666665554 799987664
No 48
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=27.12 E-value=56 Score=21.77 Aligned_cols=28 Identities=11% Similarity=-0.047 Sum_probs=21.5
Q ss_pred CCcHHHHHHHHHHHHHHHH-HhCCCCCce
Q psy13666 131 PFDENQIHTLGLLGKDIVS-QFKIKPQYV 158 (278)
Q Consensus 131 ~~t~aQi~al~~L~~~L~~-ry~I~~~~V 158 (278)
..|++|.++|.+.+.+++. ..++++..|
T Consensus 13 grs~eqK~~l~~~lt~~l~~~lg~p~~~v 41 (67)
T 3m21_A 13 GPTNEQKQQLIEGVSDLMVKVLNKNKASI 41 (67)
T ss_dssp BSCHHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCcCcccE
Confidence 5799999998877776665 579987654
No 49
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=26.28 E-value=49 Score=26.13 Aligned_cols=29 Identities=7% Similarity=0.058 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHhCCC--CCceeecCC
Q psy13666 135 NQIHTLGLLGKDIVSQFKIK--PQYVLGHTD 163 (278)
Q Consensus 135 aQi~al~~L~~~L~~ry~I~--~~~VvgH~D 163 (278)
...+.+..++..++++++|+ +-.|+|||-
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~ 111 (209)
T 3og9_A 81 EETDWLTDEVSLLAEKHDLDVHKMIAIGYSN 111 (209)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCEEEEETH
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEEECH
Confidence 44566778888888999994 456799993
No 50
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=25.53 E-value=48 Score=27.04 Aligned_cols=27 Identities=11% Similarity=0.165 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecCC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHTD 163 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~D 163 (278)
++.++.-+..+++..++.+-.++|||-
T Consensus 69 ~~~~a~d~~~~l~~l~~~~~~lvGhS~ 95 (271)
T 3ia2_A 69 YDTFADDIAQLIEHLDLKEVTLVGFSM 95 (271)
T ss_dssp HHHHHHHHHHHHHHHTCCSEEEEEETT
T ss_pred HHHHHHHHHHHHHHhCCCCceEEEEcc
Confidence 344556667778888998889999993
No 51
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=25.47 E-value=51 Score=26.11 Aligned_cols=28 Identities=7% Similarity=0.196 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCC--ceeecC
Q psy13666 135 NQIHTLGLLGKDIVSQFKIKPQ--YVLGHT 162 (278)
Q Consensus 135 aQi~al~~L~~~L~~ry~I~~~--~VvgH~ 162 (278)
...+.+..++..++++|+++++ .|+|||
T Consensus 90 ~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S 119 (223)
T 3b5e_A 90 AETAAFAAFTNEAAKRHGLNLDHATFLGYS 119 (223)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGEEEEEET
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEEEC
Confidence 3456778888899999988644 689999
No 52
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=25.33 E-value=58 Score=26.73 Aligned_cols=25 Identities=16% Similarity=0.199 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 138 HTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 138 ~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
+.+++-+..+++..++.+-.++|||
T Consensus 73 ~~~~~d~~~~l~~l~~~~~~lvGhS 97 (276)
T 1zoi_A 73 DHYADDVAAVVAHLGIQGAVHVGHS 97 (276)
T ss_dssp HHHHHHHHHHHHHHTCTTCEEEEET
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEC
Confidence 3445566677777889888999999
No 53
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=24.02 E-value=69 Score=26.89 Aligned_cols=27 Identities=11% Similarity=0.105 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 136 QIHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 136 Qi~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
.++.++.-+..+++..++.+-.|+|||
T Consensus 88 ~~~~~a~dl~~~l~~l~~~~~~lvGhS 114 (291)
T 2wue_A 88 FNRYAAMALKGLFDQLGLGRVPLVGNA 114 (291)
T ss_dssp HHHHHHHHHHHHHHHHTCCSEEEEEET
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 355566777788888899888999999
No 54
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=23.84 E-value=70 Score=26.68 Aligned_cols=26 Identities=12% Similarity=0.106 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
++..++-+..+++..++.+-.|+|||
T Consensus 87 ~~~~a~dl~~~l~~l~~~~~~lvGhS 112 (286)
T 2puj_A 87 GLVNARAVKGLMDALDIDRAHLVGNA 112 (286)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEET
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEC
Confidence 45556777788888999888999999
No 55
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=23.73 E-value=91 Score=25.07 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
++..+.-+.+++++.++.+-.++|||
T Consensus 77 ~~~~~~~~~~~l~~l~~~~~~l~GhS 102 (254)
T 2ocg_A 77 FERDAKDAVDLMKALKFKKVSLLGWS 102 (254)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEET
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 33344444556677788888999999
No 56
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=23.38 E-value=48 Score=27.42 Aligned_cols=26 Identities=19% Similarity=0.189 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
++.++.-+..+++..++.+-.|+|||
T Consensus 65 ~~~~a~dl~~~l~~l~~~~~~lvGhS 90 (268)
T 3v48_A 65 IAQMAAELHQALVAAGIEHYAVVGHA 90 (268)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEET
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEec
Confidence 34456666778888899888999999
No 57
>3d2y_A N-acetylmuramoyl-L-alanine amidase AMID; zinc amidase, PGRP, peptidoglycan recognizing protein, AMPD, acetylmuramyl-L-alanine amidase; HET: AH0; 1.75A {Escherichia coli} PDB: 2bh7_A 2wkx_A 2bgx_A* 3d2z_A
Probab=23.21 E-value=51 Score=28.79 Aligned_cols=37 Identities=5% Similarity=-0.112 Sum_probs=26.7
Q ss_pred HHHHHhhhccCCCCCcCCCCCChHHHHHHHHHHhhhCC
Q psy13666 240 IRAFKTHFSANQNPERIYADITTEDMFWAWALVAKYGS 277 (278)
Q Consensus 240 v~aFQ~hf~~~~~~~~~dG~~~~~T~a~l~aL~~ky~~ 277 (278)
|..+|......+... +||..|.+|.+++.|...+|+.
T Consensus 200 v~~lq~~L~~~GY~~-~dg~~~~~t~~aV~aFQ~~~r~ 236 (261)
T 3d2y_A 200 TASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFRP 236 (261)
T ss_dssp HHHHHHHHHHHTCCC-CSSCCHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCCC-CCCccCHHHHHHHHHHHHHcCC
Confidence 455555543323344 8999999999999999988853
No 58
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=22.58 E-value=66 Score=25.95 Aligned_cols=48 Identities=10% Similarity=0.045 Sum_probs=34.0
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCceeecCCcCCCCCCCCCCCCChHHHH
Q psy13666 132 FDENQIHTLGLLGKDIVSQFKIKPQYVLGHTDIAPGSKMDPGPLFPWGKLY 182 (278)
Q Consensus 132 ~t~aQi~al~~L~~~L~~ry~I~~~~VvgH~Diap~rK~DPG~~FpW~~L~ 182 (278)
=.++-.++..+|+..|+++.+|.++.|+.=---. +.|=-..||=..++
T Consensus 45 t~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTv---T~DL~A~FPA~aaR 92 (148)
T 1xho_A 45 TADEIVAETQKLLKEMAEKNGLEEDDIISIIFTV---TKDLDAAFPAIAAR 92 (148)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE---CTTCCSSCTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEe---CCccCccChHHHHH
Confidence 3556678899999999999999998887533211 23333479977766
No 59
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=22.45 E-value=56 Score=27.99 Aligned_cols=26 Identities=0% Similarity=0.014 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
++.++.-+..+++..+|.+-.++|||
T Consensus 99 ~~~~a~dl~~ll~~l~~~~~~lvGhS 124 (310)
T 1b6g_A 99 FEFHRNFLLALIERLDLRNITLVVQD 124 (310)
T ss_dssp HHHHHHHHHHHHHHHTCCSEEEEECT
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEcC
Confidence 45667777888888999988999998
No 60
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=22.14 E-value=61 Score=29.28 Aligned_cols=30 Identities=3% Similarity=0.040 Sum_probs=25.7
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 133 DENQIHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 133 t~aQi~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
.+..++.+.+.+..+++++++.+-.|+|||
T Consensus 107 ~~~~~~~l~~~I~~l~~~~g~~~v~LVGHS 136 (342)
T 2x5x_A 107 SSTKYAIIKTFIDKVKAYTGKSQVDIVAHS 136 (342)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSCEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 345678888999999999998888999999
No 61
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=22.07 E-value=58 Score=26.98 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
++.++.-+..+++..++.+-.++|||
T Consensus 76 ~~~~a~dl~~~l~~l~~~~~~lvGhS 101 (266)
T 3om8_A 76 LARLGEDVLELLDALEVRRAHFLGLS 101 (266)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEC
Confidence 34456667778888899988999999
No 62
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae}
Probab=21.81 E-value=68 Score=28.30 Aligned_cols=26 Identities=15% Similarity=0.195 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
+-++.-.+.++.+.+||.|+.|+|||
T Consensus 65 i~a~~~al~~~l~~~Gi~P~~v~GHS 90 (307)
T 3im8_A 65 ILATSVAIYRLLQEKGYQPDMVAGLS 90 (307)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEST
T ss_pred HHHHHHHHHHHHHHcCCCceEEEccC
Confidence 33444444566677999999999999
No 63
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A
Probab=21.80 E-value=65 Score=29.70 Aligned_cols=26 Identities=27% Similarity=0.397 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
+-++.--+.++++.+||.|+.|+|||
T Consensus 151 l~a~q~al~~ll~~~Gv~P~~v~GHS 176 (401)
T 4amm_A 151 IIADSLAGIRWLDRLGARPVGALGHS 176 (401)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEECT
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEECC
Confidence 33444444566778999999999999
No 64
>2qez_A Ethanolamine ammonia-lyase heavy chain; ethanol ammonia lyase large subunit (EUTB), structural genomics; HET: MSE; 2.15A {Listeria monocytogenes serotype 4B}
Probab=21.62 E-value=61 Score=30.61 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=27.6
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCC-CceeecCCcC
Q psy13666 133 DENQIHTLGLLGKDIVSQFKIKP-QYVLGHTDIA 165 (278)
Q Consensus 133 t~aQi~al~~L~~~L~~ry~I~~-~~VvgH~Dia 165 (278)
+.+++.++..++.+++++|.||- ..|+.|-..+
T Consensus 199 s~~~~~~ll~~l~~~~~~~~IPTQ~CVL~HVttq 232 (455)
T 2qez_A 199 STDSVVRLLNKFEEFRSKWDVPTQTCVLAHVKTQ 232 (455)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCSCEEECSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCcceEeeehHhH
Confidence 56888999999999999999984 5688887653
No 65
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens}
Probab=21.43 E-value=69 Score=28.80 Aligned_cols=26 Identities=15% Similarity=0.171 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
+-++.-.+.++.+.+||.|+.|+|||
T Consensus 66 i~a~q~al~~ll~~~Gi~P~~v~GHS 91 (336)
T 3ptw_A 66 IITTNMAILTALDKLGVKSHISCGLS 91 (336)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEST
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEEcC
Confidence 34444445566677999999999999
No 66
>3abq_A Ethanolamine ammonia-lyase heavy chain; (beta/alpha)8 fold, cobalt, cobalamin; HET: B12; 2.05A {Escherichia coli} PDB: 3abo_A* 3abr_A* 3abs_A* 3any_A* 3ao0_A*
Probab=21.22 E-value=62 Score=30.59 Aligned_cols=47 Identities=19% Similarity=0.260 Sum_probs=35.2
Q ss_pred CCCCceEEEEEecCCccCcccCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCC-CceeecCCcC
Q psy13666 104 NLNSMSIGIHLVNGGVVGEKFRSTNYYPFDENQIHTLGLLGKDIVSQFKIKP-QYVLGHTDIA 165 (278)
Q Consensus 104 ~~N~~SIGIEivn~G~~~~~~~~~~~~~~t~aQi~al~~L~~~L~~ry~I~~-~~VvgH~Dia 165 (278)
+.-+.-|||.=+ . =+.+++.++..++.+++++|.||- ..|+.|-..+
T Consensus 184 G~GDAVIGiNPa---~------------Ds~~~~~~ll~~l~~~~~~~~IPTQ~CVL~HVttq 231 (453)
T 3abq_A 184 GVGDAVIGVNPV---T------------DDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQ 231 (453)
T ss_dssp TCCSSEEEECCS---S------------CCHHHHHHHHHHHHHHHHHTTCSCCEEECSCHHHH
T ss_pred cCCCeEEecCCC---C------------CCHHHHHHHHHHHHHHHHHcCCCCcceEeeehHhH
Confidence 455667887443 1 256888999999999999999984 5688887653
No 67
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=20.91 E-value=75 Score=24.28 Aligned_cols=27 Identities=11% Similarity=0.153 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 136 QIHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 136 Qi~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
.++.+.+.+..+++++++.+-.++|||
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~lvG~S 77 (181)
T 1isp_A 51 NGPVLSRFVQKVLDETGAKKVDIVAHS 77 (181)
T ss_dssp HHHHHHHHHHHHHHHHCCSCEEEEEET
T ss_pred hHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 355667777888889998888899999
No 68
>3ov9_A Nucleoprotein; orthogonal bundle, viral genomic encapsidation, viral protein; 1.60A {Rift valley fever virus} PDB: 3ouo_A 3lyf_A 4h5m_A 4h5o_A 4h5p_A 4h5q_A 4h6f_A 4h6g_A
Probab=20.30 E-value=1.2e+02 Score=26.36 Aligned_cols=87 Identities=25% Similarity=0.406 Sum_probs=50.8
Q ss_pred ChHHHHHHhCCCCcCCcchhhHHHHHhhcCCCCCCCCCCCHHHHHHHHHHcCCCCC-CCCh-HHHHHHHHhhhccCCCCC
Q psy13666 177 PWGKLYLDYGIGAWLSPDEMTVEAIVRKFKPARPYPRKLDRGIFLELLKAYGYNVT-ITNK-RSVIRAFKTHFSANQNPE 254 (278)
Q Consensus 177 pW~~L~~~~gig~w~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~q~~L~~~GY~~~-~~~~-~~~v~aFQ~hf~~~~~~~ 254 (278)
.|++++-+++-..| |..+ ...+...|.- .|.|.+.+-..|++.| .-. ..|. .-+|-+.-|-. .|.
T Consensus 3 ~~~~iavef~~~~~-d~~~--i~~~v~~faY-----qGFDa~~ii~~lke~G-g~~w~~D~k~mIVl~LtRGN----k~~ 69 (245)
T 3ov9_A 3 NYQELRVQFAAQAV-DRNE--IEQWVREFAY-----QGFDARRVIELLKQYG-GADWEKDAKKMIVLALTRGN----KPR 69 (245)
T ss_dssp CHHHHHHHHHHSCC-CHHH--HHHHHHHHSB-----CSCCHHHHHHHHHHHH-GGGHHHHHHHHHHHHHHTCS----CHH
T ss_pred cHHHHHHHHhhhhc-cHHH--HHHHHHHHHh-----cCCCHHHHHHHHHHHc-chhHHHHHHHHHHHHHhhCC----CHH
Confidence 48888776543333 3322 2233334321 3677788888888888 110 0022 33344443333 366
Q ss_pred cCCCCCChHHHHHHHHHHhhhC
Q psy13666 255 RIYADITTEDMFWAWALVAKYG 276 (278)
Q Consensus 255 ~~dG~~~~~T~a~l~aL~~ky~ 276 (278)
+....+-++..+++.+|..||.
T Consensus 70 km~kkms~eGk~~v~~Li~~Y~ 91 (245)
T 3ov9_A 70 RMMMKMSKEGKATVEALINKYK 91 (245)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHT
T ss_pred HHHHHhhHhHHHHHHHHHHHhC
Confidence 6777788888999999999995
No 69
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=20.28 E-value=2.5e+02 Score=20.19 Aligned_cols=27 Identities=11% Similarity=0.059 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecCC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHTD 163 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~D 163 (278)
++.+++.+..+++..++.+-.++|||-
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~lvG~S~ 89 (131)
T 2dst_A 63 PEELAHFVAGFAVMMNLGAPWVLLRGL 89 (131)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEECGG
T ss_pred HHHHHHHHHHHHHHcCCCccEEEEECh
Confidence 666777777888888888889999994
No 70
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=20.15 E-value=68 Score=26.35 Aligned_cols=26 Identities=19% Similarity=0.125 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCceeecC
Q psy13666 137 IHTLGLLGKDIVSQFKIKPQYVLGHT 162 (278)
Q Consensus 137 i~al~~L~~~L~~ry~I~~~~VvgH~ 162 (278)
++.+++-+..+++..++.+-.++|||
T Consensus 75 ~~~~~~dl~~~l~~l~~~~~~lvGhS 100 (266)
T 2xua_A 75 IEQLTGDVLGLMDTLKIARANFCGLS 100 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEET
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 34456666777888899888999999
Done!