Query psy13668
Match_columns 513
No_of_seqs 280 out of 3083
Neff 9.5
Searched_HMMs 46136
Date Fri Aug 16 17:22:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13668.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13668hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2532|consensus 100.0 1.1E-32 2.3E-37 281.5 22.7 331 20-475 73-457 (466)
2 TIGR00894 2A0114euk Na(+)-depe 99.9 5.4E-24 1.2E-28 222.0 22.3 332 19-474 75-459 (465)
3 COG2271 UhpC Sugar phosphate p 99.9 1.9E-21 4.1E-26 188.6 18.7 198 22-225 66-316 (448)
4 PLN00028 nitrate transmembrane 99.8 3.2E-19 6.9E-24 186.2 21.3 195 22-227 73-318 (476)
5 TIGR02332 HpaX 4-hydroxyphenyl 99.8 1.1E-17 2.5E-22 171.5 28.3 281 22-313 45-396 (412)
6 COG2814 AraJ Arabinose efflux 99.8 1.8E-17 3.8E-22 163.2 28.1 269 22-313 50-362 (394)
7 TIGR00892 2A0113 monocarboxyla 99.8 1.6E-18 3.6E-23 179.9 21.8 200 22-224 56-303 (455)
8 PRK11663 regulatory protein Uh 99.8 1.9E-18 4.2E-23 178.5 21.7 199 22-225 60-307 (434)
9 PRK09556 uhpT sugar phosphate 99.8 1.6E-17 3.4E-22 173.3 28.5 281 22-311 66-411 (467)
10 PRK14995 methyl viologen resis 99.8 2.1E-17 4.6E-22 173.5 28.1 279 9-314 117-415 (495)
11 TIGR00903 2A0129 major facilit 99.8 3E-17 6.5E-22 165.3 28.0 266 22-311 28-341 (368)
12 PRK11273 glpT sn-glycerol-3-ph 99.8 3.1E-18 6.7E-23 177.9 18.8 200 22-226 65-318 (452)
13 PRK03545 putative arabinose tr 99.8 1.4E-16 3E-21 162.4 29.7 266 22-313 46-356 (390)
14 TIGR00893 2A0114 d-galactonate 99.8 9.6E-17 2.1E-21 162.8 27.7 282 22-313 31-374 (399)
15 TIGR00900 2A0121 H+ Antiporter 99.8 1.6E-16 3.5E-21 159.6 26.5 278 21-312 35-363 (365)
16 PRK09705 cynX putative cyanate 99.8 5.6E-16 1.2E-20 158.0 30.4 265 22-312 46-355 (393)
17 PRK10091 MFS transport protein 99.8 5.1E-16 1.1E-20 157.7 29.1 266 22-313 40-351 (382)
18 TIGR00711 efflux_EmrB drug res 99.8 2.3E-16 4.9E-21 165.5 27.2 283 6-314 110-412 (485)
19 TIGR00899 2A0120 sugar efflux 99.8 5.1E-16 1.1E-20 157.0 28.7 268 22-312 35-349 (375)
20 TIGR00890 2A0111 Oxalate/Forma 99.8 3.7E-16 7.9E-21 157.7 26.2 273 22-312 40-357 (377)
21 TIGR00712 glpT glycerol-3-phos 99.7 7.5E-17 1.6E-21 166.9 19.6 202 22-228 63-318 (438)
22 PRK11551 putative 3-hydroxyphe 99.7 6.7E-16 1.4E-20 158.2 26.2 271 22-312 52-370 (406)
23 PRK03699 putative transporter; 99.7 2E-15 4.3E-20 154.0 29.2 268 22-312 44-355 (394)
24 PRK10642 proline/glycine betai 99.7 1.3E-15 2.8E-20 159.9 28.5 275 26-311 63-403 (490)
25 TIGR00881 2A0104 phosphoglycer 99.7 7E-16 1.5E-20 155.7 25.5 287 22-313 32-373 (379)
26 PRK10213 nepI ribonucleoside t 99.7 3.2E-15 6.9E-20 152.4 30.4 266 22-313 57-367 (394)
27 TIGR00897 2A0118 polyol permea 99.7 2E-15 4.4E-20 154.4 28.9 272 22-312 50-376 (402)
28 TIGR00710 efflux_Bcr_CflA drug 99.7 3.3E-15 7.2E-20 151.6 29.3 269 22-309 42-358 (385)
29 PRK15011 sugar efflux transpor 99.7 3.2E-15 6.9E-20 152.5 28.9 213 76-312 153-366 (393)
30 COG2223 NarK Nitrate/nitrite t 99.7 8.8E-16 1.9E-20 149.6 23.3 218 77-313 150-376 (417)
31 PRK15402 multidrug efflux syst 99.7 4.1E-15 8.8E-20 152.4 29.8 272 22-312 50-370 (406)
32 TIGR00886 2A0108 nitrite extru 99.7 1.5E-15 3.3E-20 153.0 24.7 269 22-299 39-366 (366)
33 KOG2533|consensus 99.7 3.9E-16 8.4E-21 160.4 19.1 197 21-225 82-337 (495)
34 TIGR00891 2A0112 putative sial 99.7 5.3E-15 1.2E-19 151.0 27.3 284 22-312 49-390 (405)
35 PRK10406 alpha-ketoglutarate t 99.7 8.3E-15 1.8E-19 151.3 28.7 157 153-309 234-396 (432)
36 PRK12307 putative sialic acid 99.7 4.2E-15 9.1E-20 153.3 26.2 280 22-312 55-383 (426)
37 PF07690 MFS_1: Major Facilita 99.7 7.3E-16 1.6E-20 154.2 19.2 269 22-303 34-352 (352)
38 TIGR00902 2A0127 phenyl propri 99.7 2.9E-14 6.4E-19 144.8 29.6 272 21-313 40-356 (382)
39 TIGR00896 CynX cyanate transpo 99.7 2.9E-14 6.3E-19 143.3 29.2 268 21-313 36-349 (355)
40 TIGR00895 2A0115 benzoate tran 99.7 1.5E-14 3.2E-19 147.2 27.4 284 22-309 54-397 (398)
41 PRK03893 putative sialic acid 99.7 6.5E-15 1.4E-19 155.0 24.7 57 179-235 293-349 (496)
42 PRK11043 putative transporter; 99.7 3.7E-14 8E-19 145.0 29.4 266 22-311 43-356 (401)
43 PRK11102 bicyclomycin/multidru 99.7 3.4E-14 7.4E-19 143.9 28.7 268 22-306 28-343 (377)
44 PRK09952 shikimate transporter 99.7 4.9E-14 1.1E-18 145.8 29.5 157 156-312 244-406 (438)
45 PF06609 TRI12: Fungal trichot 99.7 1.1E-13 2.3E-18 144.2 31.7 167 155-321 303-476 (599)
46 PRK11652 emrD multidrug resist 99.7 4.6E-14 1E-18 144.0 28.2 269 22-311 45-359 (394)
47 PRK10504 putative transporter; 99.7 3.3E-14 7.2E-19 148.6 27.8 277 7-311 119-414 (471)
48 PRK09528 lacY galactoside perm 99.7 1.7E-14 3.8E-19 148.4 24.4 277 22-313 48-379 (420)
49 PRK11128 putative 3-phenylprop 99.7 9.9E-14 2.2E-18 140.9 28.9 273 20-313 39-356 (382)
50 PRK10473 multidrug efflux syst 99.7 1.3E-13 2.9E-18 140.5 29.6 208 22-249 40-291 (392)
51 TIGR01299 synapt_SV2 synaptic 99.6 6.8E-14 1.5E-18 150.9 27.1 108 203-311 601-709 (742)
52 PRK10133 L-fucose transporter; 99.6 9.2E-14 2E-18 143.5 27.0 156 154-312 251-407 (438)
53 PRK10489 enterobactin exporter 99.6 7.6E-14 1.6E-18 143.5 26.2 271 22-312 54-374 (417)
54 PRK15403 multidrug efflux syst 99.6 4.2E-13 9.1E-18 137.7 31.3 272 22-311 53-372 (413)
55 PRK06814 acylglycerophosphoeth 99.6 5.3E-14 1.1E-18 162.7 26.6 276 20-311 52-395 (1140)
56 PRK15034 nitrate/nitrite trans 99.6 1.5E-13 3.2E-18 140.2 26.0 192 95-311 209-427 (462)
57 PRK09874 drug efflux system pr 99.6 2.6E-13 5.6E-18 139.0 28.1 270 22-312 56-373 (408)
58 TIGR00882 2A0105 oligosacchari 99.6 1.8E-13 3.9E-18 139.7 26.3 277 22-313 40-371 (396)
59 TIGR00883 2A0106 metabolite-pr 99.6 8.6E-14 1.9E-18 141.2 23.6 161 153-313 209-376 (394)
60 TIGR01272 gluP glucose/galacto 99.6 7.4E-14 1.6E-18 137.2 22.2 258 5-312 29-290 (310)
61 TIGR00792 gph sugar (Glycoside 99.6 4.8E-14 1E-18 145.9 21.4 201 95-311 171-379 (437)
62 TIGR00887 2A0109 phosphate:H+ 99.6 1.3E-13 2.8E-18 145.2 24.5 286 22-311 58-453 (502)
63 PRK08633 2-acyl-glycerophospho 99.6 1.8E-13 3.9E-18 158.6 27.9 280 19-310 46-382 (1146)
64 PRK11010 ampG muropeptide tran 99.6 1E-13 2.2E-18 145.3 22.7 161 153-313 214-379 (491)
65 COG2807 CynX Cyanate permease 99.6 1.5E-13 3.3E-18 131.3 20.5 194 95-312 163-359 (395)
66 PRK03633 putative MFS family t 99.6 1E-12 2.2E-17 133.4 28.1 262 21-313 42-348 (381)
67 PRK15075 citrate-proton sympor 99.6 1.8E-13 3.9E-18 141.5 22.3 248 8-313 139-395 (434)
68 TIGR00901 2A0125 AmpG-related 99.6 1.8E-13 3.9E-18 137.6 21.5 234 8-296 105-355 (356)
69 TIGR00898 2A0119 cation transp 99.6 6.5E-13 1.4E-17 140.1 26.4 289 9-307 114-467 (505)
70 PRK11646 multidrug resistance 99.6 8.3E-13 1.8E-17 135.0 26.3 266 22-312 48-359 (400)
71 PRK10054 putative transporter; 99.6 5.4E-13 1.2E-17 136.1 24.4 269 21-313 44-360 (395)
72 TIGR00885 fucP L-fucose:H+ sym 99.6 1.6E-12 3.6E-17 133.0 27.8 268 22-312 40-381 (410)
73 PRK05122 major facilitator sup 99.6 1.5E-12 3.2E-17 133.1 27.3 259 22-312 53-364 (399)
74 TIGR00889 2A0110 nucleoside tr 99.6 1.2E-12 2.5E-17 134.5 25.9 272 21-311 39-370 (418)
75 PRK05122 major facilitator sup 99.6 4.2E-14 9.2E-19 144.5 15.2 151 160-311 14-173 (399)
76 KOG2504|consensus 99.6 2.6E-13 5.5E-18 141.0 20.3 205 22-229 83-365 (509)
77 cd06174 MFS The Major Facilita 99.6 3.1E-12 6.6E-17 127.5 27.5 246 21-311 35-326 (352)
78 PRK11195 lysophospholipid tran 99.6 2.8E-12 6E-17 130.8 27.5 271 22-310 40-354 (393)
79 KOG2532|consensus 99.5 4.1E-14 8.8E-19 145.2 12.8 258 6-318 148-425 (466)
80 TIGR00879 SP MFS transporter, 99.5 6.4E-13 1.4E-17 138.5 22.0 289 20-312 71-445 (481)
81 TIGR02718 sider_RhtX_FptX side 99.5 9.6E-13 2.1E-17 134.1 22.7 217 75-312 142-366 (390)
82 PRK12382 putative transporter; 99.5 6.9E-12 1.5E-16 127.9 28.7 259 22-312 53-364 (392)
83 PRK10077 xylE D-xylose transpo 99.5 3E-12 6.6E-17 134.1 25.2 130 178-308 288-422 (479)
84 PRK12382 putative transporter; 99.5 2.2E-13 4.8E-18 138.9 14.8 152 160-312 14-174 (392)
85 PRK10054 putative transporter; 99.5 7.6E-13 1.6E-17 135.0 17.9 150 161-311 7-157 (395)
86 PRK09528 lacY galactoside perm 99.5 2.6E-13 5.6E-18 139.7 11.8 156 156-311 5-166 (420)
87 PRK09874 drug efflux system pr 99.5 1.6E-12 3.4E-17 133.1 16.9 148 161-311 14-167 (408)
88 PRK10489 enterobactin exporter 99.5 4.8E-13 1E-17 137.6 13.0 155 155-311 11-171 (417)
89 PRK11902 ampG muropeptide tran 99.5 1.4E-11 3E-16 126.1 23.6 156 154-312 202-365 (402)
90 PF05977 MFS_3: Transmembrane 99.5 5E-11 1.1E-15 124.6 27.9 277 18-312 43-369 (524)
91 PRK03545 putative arabinose tr 99.5 2.6E-12 5.7E-17 130.9 18.0 147 163-311 11-158 (390)
92 PRK11646 multidrug resistance 99.4 3.8E-12 8.1E-17 130.1 17.7 147 164-311 13-160 (400)
93 PRK11551 putative 3-hydroxyphe 99.4 8.6E-12 1.9E-16 127.7 19.5 146 164-311 18-164 (406)
94 KOG1330|consensus 99.4 2.5E-13 5.4E-18 133.7 7.0 195 22-226 70-312 (493)
95 cd06174 MFS The Major Facilita 99.4 2E-12 4.4E-17 128.8 13.8 270 165-463 3-350 (352)
96 PRK03633 putative MFS family t 99.4 3.2E-12 7E-17 129.8 15.0 149 161-311 6-155 (381)
97 TIGR00805 oat sodium-independe 99.4 1.4E-11 3.1E-16 132.4 20.2 206 5-240 191-412 (633)
98 TIGR00897 2A0118 polyol permea 99.4 6.7E-12 1.5E-16 128.4 15.6 150 161-312 13-168 (402)
99 COG0738 FucP Fucose permease [ 99.4 2.8E-10 6.2E-15 110.7 23.9 271 22-313 50-385 (422)
100 PF13347 MFS_2: MFS/sugar tran 99.3 2.4E-11 5.1E-16 125.5 16.3 201 95-312 175-384 (428)
101 KOG0569|consensus 99.3 5.3E-10 1.2E-14 113.9 24.8 278 22-302 62-420 (485)
102 PRK15034 nitrate/nitrite trans 99.3 5.8E-11 1.3E-15 121.3 17.9 141 160-302 33-179 (462)
103 TIGR00899 2A0120 sugar efflux 99.3 1.3E-11 2.9E-16 124.7 13.3 143 168-311 4-150 (375)
104 PRK09848 glucuronide transport 99.3 1.2E-10 2.6E-15 121.0 20.6 158 154-311 221-387 (448)
105 PF05977 MFS_3: Transmembrane 99.3 2.9E-11 6.3E-16 126.3 15.9 156 155-311 4-164 (524)
106 PRK10091 MFS transport protein 99.3 3.1E-11 6.7E-16 122.6 15.5 149 161-311 3-152 (382)
107 COG2814 AraJ Arabinose efflux 99.3 1.4E-10 3E-15 114.7 18.6 288 161-468 13-389 (394)
108 PRK03699 putative transporter; 99.3 2.5E-11 5.5E-16 123.8 14.0 148 162-311 8-156 (394)
109 PRK09705 cynX putative cyanate 99.3 2.8E-11 6E-16 123.5 14.1 132 178-311 26-157 (393)
110 COG2223 NarK Nitrate/nitrite t 99.3 5.5E-11 1.2E-15 116.4 14.6 287 161-467 14-403 (417)
111 TIGR00890 2A0111 Oxalate/Forma 99.3 2.6E-11 5.7E-16 122.2 12.6 137 172-310 14-150 (377)
112 PRK11043 putative transporter; 99.3 3E-10 6.4E-15 116.2 20.0 142 170-312 12-156 (401)
113 PF11700 ATG22: Vacuole efflux 99.3 4.5E-09 9.7E-14 108.8 28.2 209 97-314 226-444 (477)
114 TIGR00893 2A0114 d-galactonate 99.3 1.9E-10 4.1E-15 116.5 17.6 128 182-311 15-143 (399)
115 PRK09556 uhpT sugar phosphate 99.3 3E-11 6.5E-16 126.1 11.5 129 180-309 48-181 (467)
116 PRK15011 sugar efflux transpor 99.2 1.7E-10 3.7E-15 117.7 16.4 150 160-311 14-168 (393)
117 PRK10504 putative transporter; 99.2 1E-10 2.2E-15 122.3 15.0 150 161-312 10-160 (471)
118 PRK09669 putative symporter Ya 99.2 6.6E-10 1.4E-14 115.3 20.1 198 95-311 181-387 (444)
119 PF01306 LacY_symp: LacY proto 99.2 4E-09 8.7E-14 105.5 23.2 292 9-313 28-376 (412)
120 COG2271 UhpC Sugar phosphate p 99.2 5.9E-11 1.3E-15 116.0 9.8 180 167-476 35-217 (448)
121 PRK11195 lysophospholipid tran 99.2 4.6E-10 1E-14 114.4 16.4 147 160-311 2-149 (393)
122 PRK10429 melibiose:sodium symp 99.2 1.7E-09 3.8E-14 113.0 20.7 156 155-311 225-392 (473)
123 TIGR00903 2A0129 major facilit 99.2 3.6E-10 7.9E-15 113.9 14.6 133 177-311 7-139 (368)
124 PRK14995 methyl viologen resis 99.2 2.9E-09 6.2E-14 112.0 21.8 99 22-122 43-186 (495)
125 TIGR00882 2A0105 oligosacchari 99.2 2.6E-10 5.5E-15 116.5 13.3 151 160-311 1-158 (396)
126 PRK15402 multidrug efflux syst 99.2 1.3E-09 2.7E-14 111.8 18.4 132 178-311 30-162 (406)
127 PF03825 Nuc_H_symport: Nucleo 99.2 3.5E-08 7.6E-13 100.2 28.5 161 155-316 201-368 (400)
128 PRK10213 nepI ribonucleoside t 99.2 1.3E-09 2.8E-14 111.2 17.9 138 173-312 32-170 (394)
129 KOG3764|consensus 99.2 3.5E-10 7.6E-15 109.5 12.5 278 19-318 105-435 (464)
130 TIGR01299 synapt_SV2 synaptic 99.1 5.4E-10 1.2E-14 120.9 14.5 124 181-306 187-311 (742)
131 TIGR02332 HpaX 4-hydroxyphenyl 99.1 3.5E-09 7.6E-14 108.7 19.8 145 164-310 11-156 (412)
132 PRK12307 putative sialic acid 99.1 1.2E-09 2.5E-14 112.7 16.1 147 163-311 20-167 (426)
133 KOG0253|consensus 99.1 3.5E-09 7.5E-14 101.4 17.3 280 23-306 116-490 (528)
134 TIGR00924 yjdL_sub1_fam amino 99.1 3.5E-10 7.7E-15 118.0 11.7 88 158-245 6-97 (475)
135 KOG4686|consensus 99.1 4.8E-10 1E-14 103.4 11.0 73 160-232 263-335 (459)
136 TIGR00900 2A0121 H+ Antiporter 99.1 2.9E-10 6.3E-15 114.1 10.5 145 166-311 4-153 (365)
137 TIGR00710 efflux_Bcr_CflA drug 99.1 2.5E-09 5.4E-14 108.4 17.1 138 172-311 16-154 (385)
138 PRK11663 regulatory protein Uh 99.1 4.2E-09 9.2E-14 108.9 19.0 86 163-249 25-110 (434)
139 TIGR00891 2A0112 putative sial 99.1 1.4E-09 3E-14 111.0 15.0 147 163-311 14-161 (405)
140 TIGR00924 yjdL_sub1_fam amino 99.1 1.5E-07 3.2E-12 98.4 30.2 279 22-310 50-441 (475)
141 PRK11652 emrD multidrug resist 99.1 6.3E-09 1.4E-13 106.1 18.9 146 164-311 11-157 (394)
142 COG2270 Permeases of the major 99.1 3.5E-08 7.6E-13 97.0 22.8 161 154-315 245-406 (438)
143 PRK10207 dipeptide/tripeptide 99.1 8.8E-08 1.9E-12 100.3 27.5 151 156-307 262-436 (489)
144 KOG2615|consensus 99.1 5.8E-08 1.3E-12 93.8 23.3 289 18-312 66-414 (451)
145 TIGR00879 SP MFS transporter, 99.1 1.3E-09 2.8E-14 113.6 12.6 110 196-306 70-183 (481)
146 PRK11462 putative transporter; 99.0 9.4E-08 2E-12 99.5 25.8 196 95-311 181-386 (460)
147 PRK15462 dipeptide/tripeptide 99.0 2.4E-09 5.3E-14 110.7 13.6 152 161-312 9-164 (493)
148 PRK10473 multidrug efflux syst 99.0 8.2E-09 1.8E-13 105.2 17.1 145 165-311 7-152 (392)
149 PRK11102 bicyclomycin/multidru 99.0 7.8E-09 1.7E-13 104.6 16.7 131 179-311 9-140 (377)
150 TIGR00889 2A0110 nucleoside tr 99.0 1.9E-09 4.2E-14 110.7 11.8 85 165-249 6-91 (418)
151 PRK08633 2-acyl-glycerophospho 99.0 6.3E-09 1.4E-13 120.9 16.2 157 156-312 4-165 (1146)
152 TIGR00902 2A0127 phenyl propri 99.0 3.8E-09 8.2E-14 107.3 12.6 147 164-312 7-154 (382)
153 PF01306 LacY_symp: LacY proto 99.0 8.1E-10 1.8E-14 110.5 7.0 75 158-232 4-78 (412)
154 PRK06814 acylglycerophosphoeth 99.0 6.6E-09 1.4E-13 120.5 15.7 157 156-312 6-170 (1140)
155 COG2211 MelB Na+/melibiose sym 99.0 4.4E-08 9.5E-13 99.2 18.8 242 16-311 145-395 (467)
156 TIGR00881 2A0104 phosphoglycer 99.0 1E-09 2.2E-14 110.7 7.2 72 172-244 6-77 (379)
157 PRK09584 tppB putative tripept 99.0 1.2E-08 2.6E-13 107.2 15.1 158 155-312 14-176 (500)
158 KOG0255|consensus 98.9 3.4E-07 7.4E-12 97.0 26.3 285 13-306 111-462 (521)
159 PRK11010 ampG muropeptide tran 98.9 2.5E-08 5.5E-13 104.6 17.3 152 157-311 8-168 (491)
160 TIGR00895 2A0115 benzoate tran 98.9 1.3E-09 2.9E-14 110.7 7.0 72 169-241 25-96 (398)
161 TIGR00898 2A0119 cation transp 98.9 5.2E-09 1.1E-13 110.4 11.7 121 189-310 116-240 (505)
162 TIGR00712 glpT glycerol-3-phos 98.9 4E-09 8.7E-14 109.2 10.6 80 162-243 28-107 (438)
163 PRK10133 L-fucose transporter; 98.9 4E-08 8.6E-13 101.6 17.8 146 162-309 27-176 (438)
164 TIGR00894 2A0114euk Na(+)-depe 98.9 5.4E-08 1.2E-12 101.6 19.0 70 6-76 151-223 (465)
165 TIGR00711 efflux_EmrB drug res 98.9 1.7E-08 3.7E-13 105.8 14.8 97 22-120 39-179 (485)
166 PRK15403 multidrug efflux syst 98.9 3.2E-08 6.9E-13 101.6 15.8 126 184-311 39-165 (413)
167 TIGR00886 2A0108 nitrite extru 98.9 2.2E-08 4.7E-13 100.9 14.4 148 162-311 2-151 (366)
168 TIGR01301 GPH_sucrose GPH fami 98.9 3.6E-07 7.8E-12 94.3 23.4 280 20-308 39-440 (477)
169 KOG0254|consensus 98.9 1.4E-07 3.1E-12 99.7 20.5 272 22-298 91-443 (513)
170 PRK10642 proline/glycine betai 98.9 8.6E-08 1.9E-12 100.8 18.7 140 165-306 20-174 (490)
171 TIGR00792 gph sugar (Glycoside 98.9 2.1E-08 4.7E-13 103.6 13.4 136 174-309 12-159 (437)
172 PRK11273 glpT sn-glycerol-3-ph 98.9 1.5E-08 3.3E-13 105.3 12.2 62 181-244 49-110 (452)
173 PRK09952 shikimate transporter 98.9 5.8E-08 1.3E-12 100.5 16.3 143 164-308 25-183 (438)
174 TIGR00788 fbt folate/biopterin 98.9 9.1E-08 2E-12 99.7 17.5 224 77-311 169-412 (468)
175 KOG0252|consensus 98.8 6.9E-08 1.5E-12 95.5 15.0 64 389-465 435-498 (538)
176 KOG3626|consensus 98.8 2E-07 4.4E-12 98.5 19.4 181 19-227 272-459 (735)
177 PRK10077 xylE D-xylose transpo 98.8 3.8E-08 8.3E-13 103.1 13.8 115 193-307 51-177 (479)
178 PRK10429 melibiose:sodium symp 98.8 8.6E-08 1.9E-12 100.3 16.1 139 168-306 13-163 (473)
179 PRK11128 putative 3-phenylprop 98.8 3.3E-08 7.2E-13 100.4 12.0 141 170-312 13-154 (382)
180 PTZ00207 hypothetical protein; 98.8 4.8E-06 1E-10 88.0 28.0 137 153-291 345-492 (591)
181 PRK09584 tppB putative tripept 98.8 6.3E-06 1.4E-10 86.7 29.0 136 170-305 281-437 (500)
182 PRK10207 dipeptide/tripeptide 98.8 6.9E-08 1.5E-12 101.0 13.7 152 161-312 14-169 (489)
183 PLN00028 nitrate transmembrane 98.8 2.1E-07 4.6E-12 97.4 17.1 139 168-309 43-182 (476)
184 PF07690 MFS_1: Major Facilita 98.8 1.2E-07 2.6E-12 94.6 14.5 144 168-312 3-147 (352)
185 PRK11902 ampG muropeptide tran 98.8 3E-07 6.6E-12 94.0 17.1 141 168-311 6-155 (402)
186 PF03209 PUCC: PUCC protein; 98.7 2.3E-06 4.9E-11 84.6 21.8 158 153-311 200-362 (403)
187 PRK10406 alpha-ketoglutarate t 98.7 3.7E-07 8E-12 94.4 17.1 136 168-305 29-179 (432)
188 PF03825 Nuc_H_symport: Nucleo 98.7 1.6E-07 3.5E-12 95.4 12.9 83 166-249 7-90 (400)
189 KOG2563|consensus 98.6 1.6E-07 3.4E-12 93.0 9.8 166 10-229 164-333 (480)
190 TIGR02718 sider_RhtX_FptX side 98.6 8.7E-07 1.9E-11 90.2 15.8 147 164-311 4-158 (390)
191 PRK03893 putative sialic acid 98.6 1E-06 2.3E-11 92.7 16.7 148 163-312 22-170 (496)
192 COG2807 CynX Cyanate permease 98.6 9.4E-07 2E-11 85.3 13.8 124 188-313 38-161 (395)
193 PF00083 Sugar_tr: Sugar (and 98.6 4.6E-11 1E-15 124.2 -17.2 286 21-311 47-410 (451)
194 TIGR00806 rfc RFC reduced fola 98.6 2.5E-05 5.4E-10 79.3 24.1 273 21-297 63-400 (511)
195 PRK09848 glucuronide transport 98.6 8.5E-07 1.8E-11 92.1 14.3 73 169-241 16-93 (448)
196 PRK15075 citrate-proton sympor 98.6 1.5E-06 3.2E-11 90.0 15.9 145 163-309 17-176 (434)
197 TIGR00885 fucP L-fucose:H+ sym 98.5 2E-06 4.3E-11 88.2 15.6 149 162-312 4-156 (410)
198 TIGR00806 rfc RFC reduced fola 98.5 1.9E-06 4.1E-11 87.3 14.6 131 179-310 43-174 (511)
199 KOG3764|consensus 98.5 6.5E-07 1.4E-11 87.2 10.7 118 193-311 102-221 (464)
200 PRK09669 putative symporter Ya 98.5 1.5E-06 3.3E-11 90.2 13.9 135 171-305 19-165 (444)
201 COG0738 FucP Fucose permease [ 98.5 3.1E-06 6.8E-11 83.0 14.4 128 183-311 34-165 (422)
202 TIGR00892 2A0113 monocarboxyla 98.5 1.5E-06 3.2E-11 90.5 13.2 131 180-312 38-169 (455)
203 PTZ00207 hypothetical protein; 98.4 5.9E-06 1.3E-10 87.3 16.1 137 172-310 38-179 (591)
204 PF13347 MFS_2: MFS/sugar tran 98.4 3.6E-06 7.7E-11 86.9 14.2 139 172-310 12-164 (428)
205 KOG1330|consensus 98.4 7.9E-07 1.7E-11 88.4 8.4 55 188-242 59-113 (493)
206 TIGR00883 2A0106 metabolite-pr 98.4 2.1E-06 4.6E-11 86.9 11.8 101 208-308 46-154 (394)
207 TIGR00896 CynX cyanate transpo 98.4 2.7E-06 5.8E-11 85.4 11.4 127 183-312 22-148 (355)
208 PF11700 ATG22: Vacuole efflux 98.4 9.3E-06 2E-10 84.3 15.4 108 200-307 73-209 (477)
209 TIGR00805 oat sodium-independe 98.3 3.9E-06 8.5E-11 90.6 11.9 71 176-246 47-117 (633)
210 PF03137 OATP: Organic Anion T 98.3 1.2E-07 2.6E-12 99.7 0.0 267 21-312 178-514 (539)
211 COG3104 PTR2 Dipeptide/tripept 98.3 5E-06 1.1E-10 83.9 11.0 94 155-248 14-113 (498)
212 PRK15462 dipeptide/tripeptide 98.3 0.00072 1.6E-08 70.4 26.7 58 8-67 122-183 (493)
213 TIGR00880 2_A_01_02 Multidrug 98.2 7.1E-06 1.5E-10 69.6 9.4 110 202-312 3-113 (141)
214 TIGR01301 GPH_sucrose GPH fami 98.2 5E-05 1.1E-09 78.6 17.1 145 164-309 7-175 (477)
215 PF06609 TRI12: Fungal trichot 98.2 1.2E-05 2.7E-10 84.5 12.0 93 155-249 34-130 (599)
216 KOG2816|consensus 98.2 7.8E-05 1.7E-09 76.8 17.5 276 28-313 70-393 (463)
217 COG2211 MelB Na+/melibiose sym 98.2 8.3E-05 1.8E-09 75.7 17.2 144 166-309 17-172 (467)
218 TIGR00887 2A0109 phosphate:H+ 98.1 6.5E-05 1.4E-09 79.3 16.3 116 194-309 53-174 (502)
219 KOG2615|consensus 98.0 9.2E-06 2E-10 78.9 6.8 133 177-311 44-181 (451)
220 PF03209 PUCC: PUCC protein; 98.0 0.00016 3.5E-09 71.7 14.9 264 190-462 8-395 (403)
221 PF00083 Sugar_tr: Sugar (and 97.9 2.6E-06 5.7E-11 88.5 -0.4 40 198-237 47-86 (451)
222 PF06963 FPN1: Ferroportin1 (F 97.8 0.015 3.2E-07 59.4 26.0 150 152-303 250-409 (432)
223 KOG0255|consensus 97.8 9.5E-05 2.1E-09 78.4 10.7 122 190-313 111-233 (521)
224 PF06813 Nodulin-like: Nodulin 97.8 0.00016 3.6E-09 67.9 10.4 141 172-314 13-159 (250)
225 COG2270 Permeases of the major 97.8 8.6E-05 1.9E-09 73.6 8.4 122 182-303 36-168 (438)
226 TIGR00901 2A0125 AmpG-related 97.8 0.00035 7.5E-09 70.1 13.2 130 181-313 8-146 (356)
227 TIGR00788 fbt folate/biopterin 97.8 0.0004 8.7E-09 72.5 14.0 148 163-312 28-184 (468)
228 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00013 2.7E-09 55.3 6.2 66 167-233 6-71 (77)
229 KOG2504|consensus 97.7 0.00011 2.3E-09 77.0 7.4 150 163-313 44-197 (509)
230 PRK11462 putative transporter; 97.6 0.00093 2E-08 69.6 14.3 138 170-307 18-167 (460)
231 KOG0253|consensus 97.6 0.00073 1.6E-08 65.7 12.1 67 177-243 93-159 (528)
232 PF05631 DUF791: Protein of un 97.4 0.017 3.8E-07 56.6 18.5 68 154-224 237-305 (354)
233 TIGR00880 2_A_01_02 Multidrug 97.4 0.00011 2.4E-09 62.1 2.7 67 380-464 70-137 (141)
234 KOG2533|consensus 97.3 0.00028 6.1E-09 73.3 4.7 76 383-470 157-232 (495)
235 PF03092 BT1: BT1 family; Int 97.3 0.0021 4.5E-08 66.3 11.0 230 77-310 135-378 (433)
236 KOG3762|consensus 97.2 0.00075 1.6E-08 68.8 7.1 86 156-242 366-451 (618)
237 KOG0569|consensus 97.1 0.01 2.2E-07 61.3 13.5 119 188-306 45-172 (485)
238 TIGR01272 gluP glucose/galacto 97.0 0.02 4.4E-07 56.2 14.8 63 161-223 8-72 (310)
239 PF07672 MFS_Mycoplasma: Mycop 96.9 0.024 5.2E-07 52.9 13.2 203 95-310 39-266 (267)
240 KOG0254|consensus 96.9 0.0094 2E-07 63.1 11.8 112 198-311 90-202 (513)
241 KOG2563|consensus 96.8 0.008 1.7E-07 60.3 9.6 129 184-313 67-203 (480)
242 KOG2325|consensus 96.7 0.023 5E-07 58.4 13.0 83 162-244 35-119 (488)
243 COG3104 PTR2 Dipeptide/tripept 96.7 0.13 2.8E-06 52.7 18.0 49 9-58 140-192 (498)
244 PF03137 OATP: Organic Anion T 96.6 0.00054 1.2E-08 72.4 -0.0 73 175-247 16-88 (539)
245 PF03092 BT1: BT1 family; Int 96.5 0.034 7.3E-07 57.4 12.9 128 185-313 13-151 (433)
246 PF01770 Folate_carrier: Reduc 96.5 1.1 2.4E-05 45.3 24.4 146 155-301 241-391 (412)
247 PF02487 CLN3: CLN3 protein; 96.5 1.2 2.5E-05 45.1 23.5 41 265-305 349-390 (402)
248 TIGR00926 2A1704 Peptide:H+ sy 96.4 0.014 3E-07 63.1 9.2 135 176-310 2-148 (654)
249 KOG2325|consensus 96.3 0.11 2.3E-06 53.6 14.8 59 388-464 416-474 (488)
250 KOG3626|consensus 96.2 0.029 6.3E-07 60.3 10.4 87 161-247 96-182 (735)
251 PF06779 DUF1228: Protein of u 96.2 0.021 4.6E-07 43.7 6.8 77 174-251 5-81 (85)
252 KOG0252|consensus 96.1 0.0033 7.2E-08 63.1 2.2 102 194-296 81-190 (538)
253 PF05631 DUF791: Protein of un 96.0 0.37 8E-06 47.5 16.0 80 161-244 37-116 (354)
254 COG0477 ProP Permeases of the 96.0 0.28 6E-06 46.7 15.6 131 181-312 22-158 (338)
255 PF06963 FPN1: Ferroportin1 (F 95.2 0.09 2E-06 53.8 8.9 71 163-233 4-74 (432)
256 KOG2816|consensus 94.6 0.2 4.3E-06 51.9 9.7 102 207-312 72-174 (463)
257 TIGR00769 AAA ADP/ATP carrier 94.4 7.2 0.00016 40.6 20.6 84 152-235 255-341 (472)
258 PRK03612 spermidine synthase; 94.0 1.3 2.8E-05 46.9 14.4 143 168-311 21-170 (521)
259 TIGR00769 AAA ADP/ATP carrier 93.5 1.7 3.8E-05 45.1 13.9 144 162-310 8-189 (472)
260 PF01770 Folate_carrier: Reduc 93.1 0.59 1.3E-05 47.3 9.6 70 180-249 22-93 (412)
261 PF05978 UNC-93: Ion channel r 92.7 3.3 7.2E-05 35.9 12.5 109 201-311 41-150 (156)
262 KOG0637|consensus 92.0 0.71 1.5E-05 46.8 8.3 143 163-306 34-199 (498)
263 TIGR00926 2A1704 Peptide:H+ sy 89.2 1.2 2.5E-05 48.5 7.7 91 366-467 90-184 (654)
264 KOG3762|consensus 89.0 0.17 3.6E-06 52.3 1.0 68 176-244 26-94 (618)
265 PF03219 TLC: TLC ATP/ADP tran 86.8 44 0.00096 35.0 19.1 78 153-230 272-352 (491)
266 PF06813 Nodulin-like: Nodulin 85.6 1 2.2E-05 42.5 4.1 34 389-422 124-157 (250)
267 KOG3810|consensus 85.3 34 0.00073 34.0 14.1 143 156-298 229-374 (433)
268 KOG3098|consensus 84.7 25 0.00054 36.4 13.9 148 155-302 234-404 (461)
269 TIGR00939 2a57 Equilibrative N 81.9 31 0.00066 35.7 13.5 106 200-305 310-427 (437)
270 KOG1479|consensus 81.5 64 0.0014 32.7 18.1 47 183-229 265-315 (406)
271 KOG3574|consensus 78.4 80 0.0017 31.9 14.3 155 155-312 259-431 (510)
272 KOG4686|consensus 73.2 0.39 8.4E-06 45.6 -3.0 149 161-311 41-197 (459)
273 KOG1479|consensus 69.9 24 0.00053 35.7 8.5 75 375-466 131-205 (406)
274 PF02990 EMP70: Endomembrane p 68.1 19 0.0004 38.2 7.8 68 155-223 252-319 (521)
275 PF00854 PTR2: POT family; In 64.8 3.5 7.7E-05 41.5 1.6 58 391-466 67-124 (372)
276 PF12832 MFS_1_like: MFS_1 lik 62.9 23 0.0005 26.5 5.3 34 22-56 37-70 (77)
277 KOG3574|consensus 62.3 43 0.00093 33.7 8.3 82 161-246 31-118 (510)
278 KOG4332|consensus 61.3 1.4E+02 0.003 28.7 11.0 40 361-400 344-384 (454)
279 PF13000 Acatn: Acetyl-coenzym 61.1 2.2E+02 0.0048 29.9 15.7 155 155-310 272-465 (544)
280 KOG4332|consensus 58.6 1.8E+02 0.0038 28.0 11.9 131 155-288 242-382 (454)
281 PRK03612 spermidine synthase; 56.2 22 0.00048 37.6 5.8 48 375-422 124-171 (521)
282 KOG1237|consensus 55.1 57 0.0012 35.0 8.6 75 166-240 42-117 (571)
283 PF03605 DcuA_DcuB: Anaerobic 50.1 1.2E+02 0.0026 30.1 9.2 23 442-464 161-183 (364)
284 PF02487 CLN3: CLN3 protein; 50.0 22 0.00047 36.1 4.3 24 442-465 172-195 (402)
285 PRK12489 anaerobic C4-dicarbox 49.7 1.7E+02 0.0037 30.2 10.7 23 442-464 169-191 (443)
286 PF07857 DUF1632: CEO family ( 48.6 2.4E+02 0.0053 26.7 13.5 21 172-192 189-209 (254)
287 KOG4830|consensus 48.1 53 0.0011 31.2 6.0 101 151-251 191-292 (412)
288 PF01733 Nucleoside_tran: Nucl 47.1 6.4 0.00014 38.6 0.0 24 374-397 10-33 (309)
289 PF01102 Glycophorin_A: Glycop 44.8 21 0.00045 29.5 2.6 22 445-466 69-90 (122)
290 PF00854 PTR2: POT family; In 44.4 38 0.00083 33.9 5.2 53 9-62 56-113 (372)
291 TIGR00939 2a57 Equilibrative N 43.4 32 0.00069 35.5 4.4 23 375-397 120-142 (437)
292 KOG0637|consensus 43.0 1.3E+02 0.0029 31.1 8.4 76 160-235 278-370 (498)
293 KOG3810|consensus 42.0 43 0.00093 33.3 4.7 162 278-469 263-425 (433)
294 PTZ00370 STEVOR; Provisional 39.7 22 0.00047 33.7 2.3 35 442-476 256-290 (296)
295 COG3202 ATP/ADP translocase [E 37.3 5.1E+02 0.011 27.2 18.4 27 153-179 274-300 (509)
296 TIGR01478 STEVOR variant surfa 35.8 34 0.00074 32.4 2.9 34 442-475 260-293 (295)
297 TIGR02230 ATPase_gene1 F0F1-AT 32.8 2.5E+02 0.0055 22.3 7.2 41 25-65 48-91 (100)
298 PHA03049 IMV membrane protein; 31.9 99 0.0021 22.2 3.9 25 446-470 5-29 (68)
299 PF01733 Nucleoside_tran: Nucl 31.1 19 0.00042 35.2 0.5 20 202-221 187-206 (309)
300 PF07857 DUF1632: CEO family ( 30.6 45 0.00098 31.5 2.9 18 448-465 119-136 (254)
301 PF03547 Mem_trans: Membrane t 27.5 42 0.0009 33.9 2.3 8 453-460 135-142 (385)
302 COG0477 ProP Permeases of the 27.2 1.8E+02 0.004 26.8 6.7 52 7-59 115-172 (338)
303 COG5336 Uncharacterized protei 26.3 95 0.0021 24.8 3.5 38 207-244 52-90 (116)
304 PF15061 DUF4538: Domain of un 25.8 59 0.0013 22.8 2.0 26 442-467 4-29 (58)
305 COG2119 Predicted membrane pro 25.3 5E+02 0.011 23.2 15.9 31 206-236 143-173 (190)
306 PF06779 DUF1228: Protein of u 24.6 3.2E+02 0.007 20.9 6.8 33 22-55 29-61 (85)
307 PF02694 UPF0060: Uncharacteri 24.5 1.1E+02 0.0024 24.4 3.6 50 197-246 54-103 (107)
308 PF04277 OAD_gamma: Oxaloaceta 24.3 1E+02 0.0022 22.9 3.4 20 442-461 11-30 (79)
309 KOG3098|consensus 23.5 6.6E+02 0.014 26.2 10.0 110 199-310 51-162 (461)
310 COG0786 GltS Na+/glutamate sym 23.1 8E+02 0.017 24.9 11.7 26 203-228 247-272 (404)
311 COG2962 RarD Predicted permeas 22.4 3.3E+02 0.0072 26.2 6.9 32 155-186 63-94 (293)
312 PRK14860 tatA twin arginine tr 22.3 87 0.0019 22.5 2.4 6 462-467 18-23 (64)
313 KOG3880|consensus 21.6 8E+02 0.017 24.3 10.6 53 251-303 342-395 (409)
314 PRK02237 hypothetical protein; 21.5 1.8E+02 0.004 23.3 4.3 49 197-245 56-104 (109)
315 KOG1277|consensus 21.5 36 0.00078 34.6 0.4 49 5-53 312-360 (593)
316 PF04024 PspC: PspC domain; I 20.3 2.9E+02 0.0064 19.6 4.8 9 42-51 19-27 (61)
No 1
>KOG2532|consensus
Probab=100.00 E-value=1.1e-32 Score=281.50 Aligned_cols=331 Identities=31% Similarity=0.585 Sum_probs=285.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH---------------------------------
Q psy13668 20 SNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA--------------------------------- 66 (513)
Q Consensus 20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~--------------------------------- 66 (513)
.-.+...++...|.++++..+|+++||+ |-|.+|...+.+.....+
T Consensus 73 ~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~ 151 (466)
T KOG2532|consen 73 TEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGS 151 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhc
Confidence 3356778889999999999999999999 888888765544432221
Q ss_pred -------------HHHHHHhhhhhHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668 67 -------------LWMTFATGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG 132 (513)
Q Consensus 67 -------------~~~~~~~~~~~g~~~~~~~~~~l~~~-~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 132 (513)
...+...+..+|.++..++++.+.+. . ||+++||+.|.+++++.++|+++..|+|++|+..
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~-GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~i---- 226 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL-GWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNI---- 226 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC-CCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCC----
Confidence 11133334458889999999999988 6 9999999999999999999999999999999998
Q ss_pred ccccccchhhhhccCCC------CCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchh
Q psy13668 133 TAVMHKSNRFIFSFQNL------PPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWP 206 (513)
Q Consensus 133 ~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~ 206 (513)
.++|++++++++.. .+.|++++++++++|..++..++.+++++.+.+|+|.|+++++|++..+.|++.+++
T Consensus 227 ---s~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP 303 (466)
T KOG2532|consen 227 ---SEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP 303 (466)
T ss_pred ---CHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHH
Confidence 88888887654321 367999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHH
Q psy13668 207 NRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGT 286 (513)
Q Consensus 207 ~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~ 286 (513)
.+.+.+..+++|+++||..+| .+..
T Consensus 304 ~l~~~~~k~~~g~lsD~l~~~-~ls~------------------------------------------------------ 328 (466)
T KOG2532|consen 304 FLAMAIVKFVAGQLSDRLTFR-ILSE------------------------------------------------------ 328 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-cCch------------------------------------------------------
Confidence 999999999999999997766 2211
Q ss_pred HHHHHHHHHhHHhhHHHHHHHHhccchhhhHHHhhhhhhhhhccCCCCCCCccchhhcccchhhhhhhhccCCc-hhHHH
Q psy13668 287 LMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCN-RLAVT 365 (513)
Q Consensus 287 ~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 365 (513)
+.+ || .+..++..+++++++.+.+.+++ ....+
T Consensus 329 ------------------------------------t~~-rk---------ifn~i~~~~~ai~l~~l~~~~~~~~~~a~ 362 (466)
T KOG2532|consen 329 ------------------------------------TTV-RK---------IFNTIAFGGPAVFLLVLAFTSDEHRLLAV 362 (466)
T ss_pred ------------------------------------HhH-HH---------HHHhHHHHHHHHHHHeeeecCCCcchHHH
Confidence 122 77 89999999999999999998754 45788
Q ss_pred HHHHhhhcccccccccccccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhH
Q psy13668 366 VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRV 445 (513)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (513)
.++.++.++.|+..++...+.+|.+|||++.++|+.|+..++.++++|.++|.+.++.+.+ +|+.
T Consensus 363 ~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~---------------eW~~ 427 (466)
T KOG2532|consen 363 ILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTRE---------------EWRI 427 (466)
T ss_pred HHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHH---------------HHHH
Confidence 8888889999999999999999999999999999999999999999999999999644445 8999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccCCc
Q psy13668 446 VFWTAFFVMLITNIIYCFMGSGEIQEWNEP 475 (513)
Q Consensus 446 ~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 475 (513)
+|++.+++++++.+++.++++.++++|.++
T Consensus 428 VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~ 457 (466)
T KOG2532|consen 428 VFLIAAGILIVGNIIFLFFGSGEPAPWTKS 457 (466)
T ss_pred HHHHHHHHHHHhchheeEeecCcccCccCC
Confidence 999999999999999999999999999864
No 2
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=5.4e-24 Score=222.02 Aligned_cols=332 Identities=24% Similarity=0.358 Sum_probs=227.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHH------H----HHHH-------------------
Q psy13668 19 QSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAW------F----ALWM------------------- 69 (513)
Q Consensus 19 ~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~------~----~~~~------------------- 69 (513)
....|+..+.+.++.+++.+++|++.||+ |.|+++.....+..+. . ....
T Consensus 75 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~ 153 (465)
T TIGR00894 75 GALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATH 153 (465)
T ss_pred HHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHH
Confidence 44478889999999999999999999999 8887766422111110 0 0000
Q ss_pred -----------------HHHhhhhhHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668 70 -----------------TFATGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131 (513)
Q Consensus 70 -----------------~~~~~~~~g~~~~~~~~~~l~~~-~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 131 (513)
+...+..+|..+++++.+.+.+. . |||+.|++.+++++++.++++.+.+|+|++++..
T Consensus 154 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~-gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~--- 229 (465)
T TIGR00894 154 KIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG-GWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCI--- 229 (465)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCC---
Confidence 11111236777888888888776 5 9999999999999888888887778887665543
Q ss_pred cccccccchhhhhcc------CCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhch
Q psy13668 132 GTAVMHKSNRFIFSF------QNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGW 205 (513)
Q Consensus 132 ~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~ 205 (513)
+++|++...+. ++..+.+++++++++.+|...+..++.....+.+.+|+|.|+++.+|++..+.++....
T Consensus 230 ----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~ 305 (465)
T TIGR00894 230 ----SKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSL 305 (465)
T ss_pred ----CHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHH
Confidence 33332222111 11123468889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhH
Q psy13668 206 PNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAG 285 (513)
Q Consensus 206 ~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g 285 (513)
+.++..++.++.|+++||.++|+....-..
T Consensus 306 ~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~-------------------------------------------------- 335 (465)
T TIGR00894 306 PYLFAWLCSIFAGYLADFLKSSKTLSLTAA-------------------------------------------------- 335 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcHHHH--------------------------------------------------
Confidence 999999999999999999765543211000
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHHhccchhhhHHHhhhhhhhhhccCCCCCCCccchhhcccchhhhhhhhccCCchhHHH
Q psy13668 286 TLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVT 365 (513)
Q Consensus 286 ~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (513)
++ .....+....+++.+.......+....+
T Consensus 336 -----------------------------------------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (465)
T TIGR00894 336 -----------------------------------------RK---------IFNGIGGLGPGIFAYALPYLSAAFYLTI 365 (465)
T ss_pred -----------------------------------------HH---------HHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 00 0000000000000001111111222222
Q ss_pred HHHHhhhcccccccccccccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhH
Q psy13668 366 VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRV 445 (513)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (513)
..+.++.+..+...+.......|..|+++|.++|+.|+.+.++++++|.+.|.+.+....+ +|+.
T Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~---------------~~~~ 430 (465)
T TIGR00894 366 IILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKN---------------VWLI 430 (465)
T ss_pred HHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCch---------------HHHH
Confidence 2333333333333444455566788899999999999999999999999999998764334 7999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccCC
Q psy13668 446 VFWTAFFVMLITNIIYCFMGSGEIQEWNE 474 (513)
Q Consensus 446 ~f~~~a~~~~~~~~~~~~~~~~~~~~~~~ 474 (513)
+|.+.+++.+++.+++.++.+.++++|++
T Consensus 431 ~f~~~~~~~~i~~i~~~~~~~~~~~~w~~ 459 (465)
T TIGR00894 431 VFLIMAFVNILCVIFYLIFGSAERQDWAK 459 (465)
T ss_pred HHHHHHHHHHHHHHHeeeeecceecCCCC
Confidence 99999999999998888777777777653
No 3
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.88 E-value=1.9e-21 Score=188.60 Aligned_cols=198 Identities=16% Similarity=0.137 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH----HHHHHHHHH---------HHHH-------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV----FGAVGLAWF---------ALWM------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~----~g~~~~~~~---------~~~~------------------- 69 (513)
+|+..+.+.+...++..+.|.++||. +-|...-+ .+++.+.+. ++|.
T Consensus 66 lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~ 144 (448)
T COG2271 66 LGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITH 144 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 68888999999999999999999999 75544332 122111111 0110
Q ss_pred ------------HHHhhhhhHHHHHHHHH--HHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc--cchhcccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVS--GLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES--THYVAYGT 133 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~--~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~ 133 (513)
+++...++|..+.+++. +.+..+. +||..|++.++++++++++.++..+|+|++. |..+++++
T Consensus 145 Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~ 223 (448)
T COG2271 145 WFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG 223 (448)
T ss_pred HcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc
Confidence 11112247788888887 8888887 9999999999999999999999999999874 55555554
Q ss_pred cccccchhhhhccCCCC-----CCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH
Q psy13668 134 AVMHKSNRFIFSFQNLP-----PTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR 208 (513)
Q Consensus 134 ~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~ 208 (513)
+..+.+ . +.++.+ ..-.+.+++||..|.++++.++.+..-|++..|.|.|+.|..|+|..++....+.+-.
T Consensus 224 d~~e~~---~-~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~ 299 (448)
T COG2271 224 DPLEIY---E-EEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEV 299 (448)
T ss_pred Cchhhh---h-hhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 333221 1 111111 1123557899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcCCCc
Q psy13668 209 SVIVTYKMRTILSGPRL 225 (513)
Q Consensus 209 ~~~ig~~~~g~l~dr~~ 225 (513)
++++|.+++||+|||..
T Consensus 300 agl~G~Ll~GwlSDklf 316 (448)
T COG2271 300 AGLPGTLLAGWLSDKLF 316 (448)
T ss_pred HhhHHHHHHHHHHHHhc
Confidence 99999999999999953
No 4
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.83 E-value=3.2e-19 Score=186.24 Aligned_cols=195 Identities=13% Similarity=0.031 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHHHHHhh----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWMTFATG---------------- 74 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~~~~~~---------------- 74 (513)
.+...+...++..++.++.|+++||+ |.|.+..+...+..+... ....+..+
T Consensus 73 ~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~ 151 (476)
T PLN00028 73 IGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTM 151 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 45567778899999999999999999 877766542211111000 00000000
Q ss_pred ----------------hhhHHHHHHHHHHHH----Hhc----cCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhc
Q psy13668 75 ----------------AQIGNVVSMAVSGLL----IRY----LGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVA 130 (513)
Q Consensus 75 ----------------~~~g~~~~~~~~~~l----~~~----~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 130 (513)
..+|..+++.+.+.+ ... ..|||+.|++.+++++++.+.++++.++.|+++ .
T Consensus 152 ~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~--~-- 227 (476)
T PLN00028 152 FNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN--Y-- 227 (476)
T ss_pred cChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc--h--
Confidence 012233333332222 111 128999999999988887777666655655432 1
Q ss_pred ccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHH
Q psy13668 131 YGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSV 210 (513)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~ 210 (513)
++.+++.. .+++.....+++.++++++|...+..+......+.+..|+|.|+.+.+|++..+++.+.+...+++
T Consensus 228 -----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~ 301 (476)
T PLN00028 228 -----RELKKSGT-MPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMN 301 (476)
T ss_pred -----hhHHhcCc-cccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 11000000 000000122356678889888888777776777788889999999889999999999999999999
Q ss_pred HHHHHhhhhhcCCCccc
Q psy13668 211 IVTYKMRTILSGPRLTS 227 (513)
Q Consensus 211 ~ig~~~~g~l~dr~~~~ 227 (513)
.+++++.|+++||++||
T Consensus 302 ~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 302 LFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHhhhHHHHHHHHHh
Confidence 99999999999999876
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.81 E-value=1.1e-17 Score=171.45 Aligned_cols=281 Identities=12% Similarity=0.090 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HH-----HH-----------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WF-----AL----------------------- 67 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~-----~~----------------------- 67 (513)
.+...+...++.+++.++.|++.||+ |.|.++.....+..+ +. +.
T Consensus 45 ~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~ 123 (412)
T TIGR02332 45 FGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTF 123 (412)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 67788889999999999999999999 888877642211110 00 00
Q ss_pred ----------HHHHHhhhhhHHHHHHHHHHHHHh------ccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668 68 ----------WMTFATGAQIGNVVSMAVSGLLIR------YLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131 (513)
Q Consensus 68 ----------~~~~~~~~~~g~~~~~~~~~~l~~------~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 131 (513)
..+.....++|..+++++++.+.. .. |||+.|++.++.+++..+++.+++||.|++.+..
T Consensus 124 ~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l--- 199 (412)
T TIGR02332 124 WFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALK-GWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWL--- 199 (412)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc-chhHHHHHHHHHHHHHHHHHhhccCCCcccCCCC---
Confidence 001111123566777777777753 24 9999999988888877777777788888654322
Q ss_pred cccccccchhhh----h-c------cC---CCCC----CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-c
Q psy13668 132 GTAVMHKSNRFI----F-S------FQ---NLPP----TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDV-L 192 (513)
Q Consensus 132 ~~~~~~~~~~~~----~-~------~~---~~~~----~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~-~ 192 (513)
++++++.. + + .+ +.++ ..+++++ ++.+|...+..++....++++.+|+|.++++. .
T Consensus 200 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~ 274 (412)
T TIGR02332 200 ----DEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQ 274 (412)
T ss_pred ----CHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11111000 0 0 00 0001 1233333 57888888888888888999999999999873 4
Q ss_pred CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccch-hhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhh
Q psy13668 193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPF-DFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPS 271 (513)
Q Consensus 193 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (513)
+++..+++.+.....++..+|++..|+++||+++|+. .....+...+++.+....+ +.......+...........+.
T Consensus 275 ~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~ 353 (412)
T TIGR02332 275 GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATD-HNLIQLLGIIMASMGSFSAMAI 353 (412)
T ss_pred CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHhhhhhhH
Confidence 7788899999999999999999999999999987764 3333333333332222222 2222211111111111112223
Q ss_pred HHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 272 LKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 272 ~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
......+.. ++++|++.|+.+..++++++++|.+.|.+.+..
T Consensus 354 ~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~ 396 (412)
T TIGR02332 354 FWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDAT 396 (412)
T ss_pred HHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccC
Confidence 344445544 578999999999999999999999999988753
No 6
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.81 E-value=1.8e-17 Score=163.19 Aligned_cols=269 Identities=17% Similarity=0.159 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHH------HHHHHH------------------HH----------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGA------VGLAWF------------------AL---------- 67 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~------~~~~~~------------------~~---------- 67 (513)
.|...+.+.++.+++.|+-..+.+|+ ++|.++...-. +.+..+ ..
T Consensus 50 aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~ 128 (394)
T COG2814 50 AGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAAR 128 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778889999999999999999999 99888763211 111111 11
Q ss_pred ----------HHHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 68 ----------WMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 68 ----------~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
......+..++.+++.+++.++.+.+ |||..|...+.++++..+..+..+| |.+.+.. .+
T Consensus 129 lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~-GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~-------~~ 198 (394)
T COG2814 129 LVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-GWRATFLAIAVLALLALLLLWKLLP--PSEISGS-------LP 198 (394)
T ss_pred HcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCC-------CC
Confidence 11333344577888999999999998 9999999999999888777777777 2211111 10
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
.+ ..+..+.+|+|+.+...+..++...+.|...+|+.++++|..|+|....++....++++..+|+..+
T Consensus 199 ~~-----------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~g 267 (394)
T COG2814 199 GP-----------LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLG 267 (394)
T ss_pred cc-----------hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011678999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhH
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGAL 297 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i 297 (513)
|++.|| +.|+.........++.++.+.+...+....+....+.................+..|+.++.+.+++....|+
T Consensus 268 Grl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nl 346 (394)
T COG2814 268 GRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNL 346 (394)
T ss_pred hhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHH
Confidence 999999 8888877777777777777777777665555444442222333334455556666689999999999999999
Q ss_pred HhhHHHHHHHHhccch
Q psy13668 298 SGTVSPYLVGVLTPNW 313 (513)
Q Consensus 298 ~~~igp~l~g~l~~~~ 313 (513)
|-..|..+.|.++|++
T Consensus 347 gia~GA~lGG~v~~~~ 362 (394)
T COG2814 347 GIALGAALGGLVLDAL 362 (394)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999863
No 7
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.81 E-value=1.6e-18 Score=179.89 Aligned_cols=200 Identities=13% Similarity=0.100 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH------HHHH-HHHHH-----HHh----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG------LAWF-ALWMT-----FAT---------------- 73 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~------~~~~-~~~~~-----~~~---------------- 73 (513)
.+...+...++..++.++.|+++||+ |.|.++.....+. +.+. ..+.+ +..
T Consensus 56 ~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~ 134 (455)
T TIGR00892 56 TAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLG 134 (455)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence 45556667777788888999999999 8887766321111 0000 00000 000
Q ss_pred ----------------hhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 74 ----------------GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 74 ----------------~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+..+|..+++++++.+.+.. |||+.|++.+++.++..+.+++..++.+.+++...+..+..++
T Consensus 135 ~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (455)
T TIGR00892 135 KYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPP 213 (455)
T ss_pred HHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCC
Confidence 01255677788888888887 9999999988877765554444433222111000000000000
Q ss_pred cchh-hhh-ccCCCCCCc--hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHH
Q psy13668 138 KSNR-FIF-SFQNLPPTP--WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVT 213 (513)
Q Consensus 138 ~~~~-~~~-~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig 213 (513)
+... ... +....+..+ ..+++++++++...+..++.....+....++|.|+++ +|++..+++.+.+...++.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~ 292 (455)
T TIGR00892 214 DGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFA 292 (455)
T ss_pred CCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 0000 000 000000011 1257889999988888888888888888999999987 6999999999999999999999
Q ss_pred HHhhhhhcCCC
Q psy13668 214 YKMRTILSGPR 224 (513)
Q Consensus 214 ~~~~g~l~dr~ 224 (513)
++..|+++||.
T Consensus 293 ~~~~g~l~d~~ 303 (455)
T TIGR00892 293 RPSCGLIAGLK 303 (455)
T ss_pred HHHHHHHhccc
Confidence 99999999984
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.81 E-value=1.9e-18 Score=178.51 Aligned_cols=199 Identities=13% Similarity=0.003 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-------HHH-------------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-------LWM------------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-------~~~------------------------- 69 (513)
.+...+...++.+++.++.|++.||+ |.|.++.+...+..+... .+.
T Consensus 60 ~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~ 138 (434)
T PRK11663 60 IGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTA 138 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 57788889999999999999999999 877766532211110000 000
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+......+|..+++++.+.+.+.. |||+.|++.++++++..++..++++|+|++.... +.++. .+
T Consensus 139 ~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~-~~~~~-~~ 215 (434)
T PRK11663 139 WYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLP-SVGEW-RH 215 (434)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCC-Ccccc-cc
Confidence 001111356777888888888887 9999999988877766655555667766432111 00000 00
Q ss_pred cchhhhhccCCCCCCch-----hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668 138 KSNRFIFSFQNLPPTPW-----GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV 212 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i 212 (513)
++.+...+. +.++.++ ...++++.+|...+..++.....+.+.+|+|.|+++.+|++..+++...+...+++.+
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~ 294 (434)
T PRK11663 216 DALELAQQQ-EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFI 294 (434)
T ss_pred cccccchhc-cccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 000000000 0001111 1256788899888888877778888889999999888899999999999999999999
Q ss_pred HHHhhhhhcCCCc
Q psy13668 213 TYKMRTILSGPRL 225 (513)
Q Consensus 213 g~~~~g~l~dr~~ 225 (513)
++++.|+++||+.
T Consensus 295 g~~~~g~l~dr~~ 307 (434)
T PRK11663 295 GALVAGWGSDKLF 307 (434)
T ss_pred HHHHHhhhHHHhc
Confidence 9999999999983
No 9
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.81 E-value=1.6e-17 Score=173.34 Aligned_cols=281 Identities=14% Similarity=0.051 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH----HHHHHHHHH------------HHHHHHHhh-----------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV----FGAVGLAWF------------ALWMTFATG----------- 74 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~----~g~~~~~~~------------~~~~~~~~~----------- 74 (513)
.+...+.+.++..++.++.|+++||+ |.|+++.+ .+...+... ++......+
T Consensus 66 ~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 144 (467)
T PRK09556 66 LGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSY 144 (467)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHH
Confidence 67888889999999999999999999 88886532 111111111 000000000
Q ss_pred ----------------------hhhHHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhc
Q psy13668 75 ----------------------AQIGNVVSMAVSGLLIRYL--GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVA 130 (513)
Q Consensus 75 ----------------------~~~g~~~~~~~~~~l~~~~--~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 130 (513)
.++|.++++++...+.... .+||..|.+.++++++++++++++.+++|++++..
T Consensus 145 ~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~-- 222 (467)
T PRK09556 145 STITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG-- 222 (467)
T ss_pred HHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC--
Confidence 0256677776665554431 26999999888888888777777778877654332
Q ss_pred ccccccccch--h---hhhccCCCCCCc----h-hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhh
Q psy13668 131 YGTAVMHKSN--R---FIFSFQNLPPTP----W-GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVD 200 (513)
Q Consensus 131 ~~~~~~~~~~--~---~~~~~~~~~~~~----~-~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~ 200 (513)
++++. + ...+..+.++.+ + ++.++++.+|...+..++.....++..+|+|.|+++.+|+|..+++
T Consensus 223 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~ 297 (467)
T PRK09556 223 -----KAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAI 297 (467)
T ss_pred -----ChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHH
Confidence 11110 0 000000001111 1 2368999999999999998888889999999999999999999999
Q ss_pred HHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc-CChhHHH-HHHHHHHHHHHhhhhhhHHHhhcc
Q psy13668 201 LISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS-GCNRLAV-TVSFTLGMGTMGAFLPSLKVNALD 278 (513)
Q Consensus 201 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 278 (513)
.......++..++++..|+++||++||+..........++...+... ..+.... ...+.++....+.... ......|
T Consensus 298 ~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~ 376 (467)
T PRK09556 298 NTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLL-IGVAAVG 376 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHH-HHHHHHh
Confidence 99999999999999999999999999887655443333332222222 2222222 2233333222222222 2234446
Q ss_pred cCc-chhHHHHHHHHHHHhH-HhhHHHHHHHHhcc
Q psy13668 279 LSP-NYAGTLMALVGGIGAL-SGTVSPYLVGVLTP 311 (513)
Q Consensus 279 ~~p-~~~g~~~gi~~~~~~i-~~~igp~l~g~l~~ 311 (513)
..| +.+|++.|+.+..+++ +++++|.+.|.+.|
T Consensus 377 ~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 377 FVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 665 5699999999999997 66999999999987
No 10
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.80 E-value=2.1e-17 Score=173.50 Aligned_cols=279 Identities=11% Similarity=0.024 Sum_probs=185.6
Q ss_pred hhhhhhh-h--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhh---------
Q psy13668 9 VMLHRLV-N--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQ--------- 76 (513)
Q Consensus 9 ~~~~~~~-~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~--------- 76 (513)
.++.+++ + ||++..++......+|.+++|+++|++.|.. |||++|++..++.++...+......+.+
T Consensus 117 ~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~ 195 (495)
T PRK14995 117 AGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-YWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNL 195 (495)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCh
Confidence 3455554 3 6788899999999999999999999999999 9999999988776665544444433321
Q ss_pred hHHHHH-----HHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCC
Q psy13668 77 IGNVVS-----MAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPP 151 (513)
Q Consensus 77 ~g~~~~-----~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (513)
.+.... ....+.......+|...... .........+..+...|...++|.. +
T Consensus 196 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~f~~~e~~~~~p~~-------~--------------- 252 (495)
T PRK14995 196 GHALMLIVAILLLVYSAKTALKGFLSLWVTS-LTLLTGALLLGLFIRTQLAASRPMI-------D--------------- 252 (495)
T ss_pred HhHHHHHHHHHHHHHHHHhccccCCchHHHH-HHHHHHHHHHHHHHHHHhcCCCCCc-------C---------------
Confidence 121111 01111111111123332211 1111111112222223322222222 1
Q ss_pred CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668 152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDF 231 (513)
Q Consensus 152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 231 (513)
.+++|++.+....+..++....+++...+.|.|+++.+|+|+.++++...+..++..++.++.|++.||+++|+...
T Consensus 253 ---~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~ 329 (495)
T PRK14995 253 ---MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVAT 329 (495)
T ss_pred ---HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence 56888999888888888888888888999999999999999999999999999999999999999999999999888
Q ss_pred HhhHHHHHHHHHHHhcC--ChhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668 232 SASVGPGLGILAASYSG--CNRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGV 308 (513)
Q Consensus 232 ~~~~~~~~~~~~l~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~ 308 (513)
.+.+..+++...+.... .+.+... ..+..+.+......+.........+++++|.+.++.++..++|+.+|+.+.|.
T Consensus 330 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~ 409 (495)
T PRK14995 330 GGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGL 409 (495)
T ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776665554332 2222222 23333333333333333444445556789999999999999999999999999
Q ss_pred hccchh
Q psy13668 309 LTPNWL 314 (513)
Q Consensus 309 l~~~~~ 314 (513)
+.++..
T Consensus 410 i~~~~~ 415 (495)
T PRK14995 410 LLSRSY 415 (495)
T ss_pred HHHHHH
Confidence 987554
No 11
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.80 E-value=3e-17 Score=165.27 Aligned_cols=266 Identities=10% Similarity=-0.052 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHH----H-------HH-----------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAW----F-------AL----------------------- 67 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~----~-------~~----------------------- 67 (513)
.+...+.+.+|.+++.+..|++.||+ |+|.+........... . +.
T Consensus 28 ~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~ 106 (368)
T TIGR00903 28 LGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPFLLNAFAPAASQ 106 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 57778888999999999999999999 8777654211111000 0 00
Q ss_pred ---------HHHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccc
Q psy13668 68 ---------WMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHK 138 (513)
Q Consensus 68 ---------~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 138 (513)
..+...+.++|..+++++++.+.+.. |||+.|++.++++++..+++++++||+|+++++. .+.
T Consensus 107 ~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~-------~~~ 178 (368)
T TIGR00903 107 IREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGIILVLAALPALPFQAAEG-------FGF 178 (368)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-------cch
Confidence 00111122477788888888888887 9999999989988888777777888876543211 100
Q ss_pred chhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhh
Q psy13668 139 SNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRT 218 (513)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g 218 (513)
++. ..+++++++++.+|...+..++....++++.+|+|.|+++ .|++.. .+.......+.+.++ .+
T Consensus 179 -~~~--------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~ 244 (368)
T TIGR00903 179 -KDA--------VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VA 244 (368)
T ss_pred -HHH--------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HH
Confidence 000 0134788999999999999999999999999999999976 578865 555555555555544 57
Q ss_pred hhcCCCccc---chhh-HhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc-hhHHHHHHHHH
Q psy13668 219 ILSGPRLTS---PFDF-SASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN-YAGTLMALVGG 293 (513)
Q Consensus 219 ~l~dr~~~~---~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~gi~~~ 293 (513)
+++||..|| +... ...+..++....+....+. .....++.+...+.....+.......|..|+ .||++.|+.+.
T Consensus 245 ~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~ 323 (368)
T TIGR00903 245 VIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNR-LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGF 323 (368)
T ss_pred HhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcccc-HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhH
Confidence 888886543 2222 2233333434343333322 2223333333344444555566777888875 69999999999
Q ss_pred HHhHHhhHHHHHHHHhcc
Q psy13668 294 IGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 294 ~~~i~~~igp~l~g~l~~ 311 (513)
.+++++.++|.+.+.+..
T Consensus 324 ~g~~~~~~~~~~~~~~~~ 341 (368)
T TIGR00903 324 TSRAISVALALAAMLFIS 341 (368)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999987773
No 12
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.79 E-value=3.1e-18 Score=177.91 Aligned_cols=200 Identities=11% Similarity=0.047 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH----HHHH-----------HHHHHHHhh------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG----LAWF-----------ALWMTFATG------------ 74 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~----~~~~-----------~~~~~~~~~------------ 74 (513)
.++..+...++.+++.++.|.++||+ |.|.++.....+. +... .....+..+
T Consensus 65 ~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~ 143 (452)
T PRK11273 65 LGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR 143 (452)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHH
Confidence 67788889999999999999999999 8887765322111 1110 000000000
Q ss_pred ---------------------hhhHHHH-HHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668 75 ---------------------AQIGNVV-SMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG 132 (513)
Q Consensus 75 ---------------------~~~g~~~-~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 132 (513)
..+|..+ ++.....+.... +||+.|++.++++++..++..++.+|+|++.+.. +..
T Consensus 144 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~ 221 (452)
T PRK11273 144 TMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN-DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLP-PIE 221 (452)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC-Chh
Confidence 0122222 222222222334 9999999988887777666666777776542211 000
Q ss_pred ccccccchhhhhccCCCCCCch-----hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH
Q psy13668 133 TAVMHKSNRFIFSFQNLPPTPW-----GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN 207 (513)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~ 207 (513)
+ .+++.+...+..+.++.+. +.+++++.+|...+..++.+...+....|+|.|+++.+|++..+++.+.....
T Consensus 222 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~ 299 (452)
T PRK11273 222 E--YKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYE 299 (452)
T ss_pred h--hhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 0 0000000000000011111 23678899999999888888888899999999999989999999998888888
Q ss_pred HHHHHHHHhhhhhcCCCcc
Q psy13668 208 RSVIVTYKMRTILSGPRLT 226 (513)
Q Consensus 208 ~~~~ig~~~~g~l~dr~~~ 226 (513)
++..+++++.|+++||+++
T Consensus 300 ~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 300 YAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred HHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999843
No 13
>PRK03545 putative arabinose transporter; Provisional
Probab=99.79 E-value=1.4e-16 Score=162.36 Aligned_cols=266 Identities=15% Similarity=0.136 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHH---H--------HHHH---------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAW---F--------ALWM--------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~---~--------~~~~--------------------- 69 (513)
.+...+...++..++.+..|.+.||+ |.|.++.....+..+- . +...
T Consensus 46 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~ 124 (390)
T PRK03545 46 VGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIR 124 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777788889999999999999999 9888876432111110 0 0000
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+...+..+|..+++++++.+.+.. |||+.|.+.++++++..+......|+.|++++ +
T Consensus 125 ~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~----------~ 193 (390)
T PRK03545 125 VAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTFLAIGGGALITLLLLIKLLPLLPSEHS----------G 193 (390)
T ss_pred hCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc----------c
Confidence 001111356677888888888877 99999999888777665555444554332111 0
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
+. .+.++.+|++.++......++.....+....++|.++++.+|+|..+.+.+.....++.+++++..
T Consensus 194 ~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~ 261 (390)
T PRK03545 194 SL------------KSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLF 261 (390)
T ss_pred hH------------HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 00 112567888888877776666667777777889999998889999999999999999999999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHH-HHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHh
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLA-VTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGA 296 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~ 296 (513)
|+++||.++|+... +.....++...+.....+... ....+..+.+ .....+.......+..|++++.+.|+.+...+
T Consensus 262 g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 339 (390)
T PRK03545 262 SRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIA-IMCIGLAMQVKVLKLAPDATDVAMALFSGIFN 339 (390)
T ss_pred HHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH-HhcchHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 99999999876543 333333333333222222222 2222222332 22333344555667778899999999999999
Q ss_pred HHhhHHHHHHHHhccch
Q psy13668 297 LSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 297 i~~~igp~l~g~l~~~~ 313 (513)
+|..+||.+.|.+.|..
T Consensus 340 ~g~~~G~~~~G~~~~~~ 356 (390)
T PRK03545 340 IGIGAGALLGNQVSLHL 356 (390)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999988754
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.78 E-value=9.6e-17 Score=162.80 Aligned_cols=282 Identities=20% Similarity=0.263 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH----HH-------HHHH---------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA----WF-------ALWM--------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~----~~-------~~~~--------------------- 69 (513)
.+...+...++..++.++.|.+.||+ |.|.++.....+..+ .. +...
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 109 (399)
T TIGR00893 31 YGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVAS 109 (399)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 67788889999999999999999999 877766532211110 00 0000
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+......+|..+++.+.+.+.+.. +||+.|.+.+++.++..+...++.+++|++.+.. ++
T Consensus 110 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 181 (399)
T TIGR00893 110 WFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWL-------TE 181 (399)
T ss_pred hCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHHhhheecCCCCccccC-------CH
Confidence 000111356778888888888877 9999999988887777666666666655432221 11
Q ss_pred cchhh----------hhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH
Q psy13668 138 KSNRF----------IFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN 207 (513)
Q Consensus 138 ~~~~~----------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~ 207 (513)
++++. .++.++.++...++.+++++++...+..++.......+..+.|.|+++.+|.+..+.+.+.....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (399)
T TIGR00893 182 EEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPG 261 (399)
T ss_pred HHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHH
Confidence 11000 00011122334577889999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCCcccch--hhHhhH--HHHH--HHHHHHhc-CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC
Q psy13668 208 RSVIVTYKMRTILSGPRLTSPF--DFSASV--GPGL--GILAASYS-GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS 280 (513)
Q Consensus 208 ~~~~ig~~~~g~l~dr~~~~~~--~~~~~~--~~~~--~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
+...++++..|+++||.+||+. ...... ...+ +....... ............++.+..+ ..+.......+..
T Consensus 262 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (399)
T TIGR00893 262 IVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNA 340 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhc
Confidence 9999999999999999998862 111111 1111 11111111 1122222222333333333 4556666666666
Q ss_pred c-chhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 281 P-NYAGTLMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 281 p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
| ++||++.|+.+...++++.++|.+.|.+.+..
T Consensus 341 ~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 341 PGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred ChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 5 67999999999999999999999999998753
No 15
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.77 E-value=1.6e-16 Score=159.61 Aligned_cols=278 Identities=12% Similarity=0.015 Sum_probs=185.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH----HHHHH--------HH-------------------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL----AWFAL--------WM------------------- 69 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~----~~~~~--------~~------------------- 69 (513)
..++..+...++.+++.++.|+++||+ |.|.++.....+.. ..... +.
T Consensus 35 ~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 113 (365)
T TIGR00900 35 VLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAY 113 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 367888889999999999999999999 88888764322111 00000 00
Q ss_pred ------------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668 70 ------------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131 (513)
Q Consensus 70 ------------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 131 (513)
.......+|..+++.+++.+.+.. |||+.|++.++..++..+......++++++ +..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 188 (365)
T TIGR00900 114 QAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GIKWAIWVDAVGFAISALLIVSVRIPELAA-SEI--- 188 (365)
T ss_pred HHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHhcccccCCC-ccc---
Confidence 000011356778888888888877 999999887665554433333222211111 010
Q ss_pred cccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHH-hhHHHHHHHhcCcchhhhhHHhchhHHHH
Q psy13668 132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIV-TDLPKYMKDVLHFSITSVDLISGWPNRSV 210 (513)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~-~~lp~~l~~~~g~s~~~~~~~~~~~~~~~ 210 (513)
++.+++..++ ....++.+++++.++...+..++......... .+.|.|.++.+|.+..+.+.+.....++.
T Consensus 189 ----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (365)
T TIGR00900 189 ----QALSNAVLRD----TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGA 260 (365)
T ss_pred ----cccchhHHHH----HHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 0000000000 01234567888888888877777777777666 78999999888999999999999999999
Q ss_pred HHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHH
Q psy13668 211 IVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMA 289 (513)
Q Consensus 211 ~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~g 289 (513)
.++++..+++.||.+||+....+....+++...+.+.+++.+.......+...+.+...+.......+.. +++||++.|
T Consensus 261 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (365)
T TIGR00900 261 LLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFG 340 (365)
T ss_pred HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999988887776666666666555432222222222222223344455555666665 567999999
Q ss_pred HHHHHHhHHhhHHHHHHHHhccc
Q psy13668 290 LVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 290 i~~~~~~i~~~igp~l~g~l~~~ 312 (513)
+.+...++++.++|.+.|.+.|.
T Consensus 341 ~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 341 AQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988764
No 16
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.77 E-value=5.6e-16 Score=157.98 Aligned_cols=265 Identities=12% Similarity=0.076 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HH-----HHHH---------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WF-----ALWM--------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~-----~~~~--------------------- 69 (513)
.+...+...++..++.++.|++.||+ |.|.++.....+..+ +. .+..
T Consensus 46 ~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~ 124 (393)
T PRK09705 46 AALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKR 124 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHH
Confidence 67788888999999999999999999 888887742221111 00 0000
Q ss_pred -----------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccc
Q psy13668 70 -----------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHK 138 (513)
Q Consensus 70 -----------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 138 (513)
....+...|..+++.+++.+.++..+||+.+.+.++..++....+.+..+++|++++ +
T Consensus 125 ~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 193 (393)
T PRK09705 125 RFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSH---------K-- 193 (393)
T ss_pred HccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc---------C--
Confidence 111111245666777777766654489998877666554443333333233222110 0
Q ss_pred chhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhh
Q psy13668 139 SNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRT 218 (513)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g 218 (513)
++ ...++.+++++.|...+..++....+++..+|+|.|+++ +|++..+++.......+++++|++..+
T Consensus 194 ~~-----------~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g 261 (393)
T PRK09705 194 TT-----------TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMP 261 (393)
T ss_pred CC-----------cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHH
Confidence 00 011345677888888777777778888999999999987 799999999999999999999999999
Q ss_pred hhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHh-hcccCc-chhHHHHHHHHHHHh
Q psy13668 219 ILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVN-ALDLSP-NYAGTLMALVGGIGA 296 (513)
Q Consensus 219 ~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p-~~~g~~~gi~~~~~~ 296 (513)
++.||.+||+....+..+..++...+...+.+.... ..+..+.+.. ...+..... ..+..| +++|+..|+.+..++
T Consensus 262 ~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 339 (393)
T PRK09705 262 AMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL-WAMVCGLGLG-GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGF 339 (393)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH-HHHHHHHhcc-chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence 999999999888877766666655544333322222 2222223322 223333333 333433 569999999999999
Q ss_pred HHhhHHHHHHHHhccc
Q psy13668 297 LSGTVSPYLVGVLTPN 312 (513)
Q Consensus 297 i~~~igp~l~g~l~~~ 312 (513)
+++.++|.+.|.+.|.
T Consensus 340 ~~~~~gp~~~G~l~~~ 355 (393)
T PRK09705 340 IIAGLAPWFSGVLRSI 355 (393)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988874
No 17
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.76 E-value=5.1e-16 Score=157.71 Aligned_cols=266 Identities=15% Similarity=0.114 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHH---------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWM--------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~--------------------- 69 (513)
.+...+...+|.+++.++.|+++||+ |.|.++.+...+..+-.. ...
T Consensus 40 ~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~ 118 (382)
T PRK10091 40 AGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSK 118 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 56778889999999999999999999 888887643221111000 000
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
....+..+|..+++++++.+.+.. +||+.|.+.+++.++..+...+..||.+++. ++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~----------~~ 187 (382)
T PRK10091 119 IIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRYTFLLIAVFNIAVLASIYFWVPDIRDEA----------KG 187 (382)
T ss_pred hCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHHHHHHHHHHHHHHHHHHHHhCCCCCccc----------cc
Confidence 000111244566677777777777 9999999988877666555455555543211 10
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
+.++ ..+.+++++.|......++.....+....+++.++++.+|++..+.+++.....++..+++++.
T Consensus 188 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 255 (382)
T PRK10091 188 GLRE------------QFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLS 255 (382)
T ss_pred CHHH------------HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHH
Confidence 0000 1345677777777666666666666677788889988889999999999999999999999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHH-HHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHH
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAV-TVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIG 295 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~ 295 (513)
|++.||+++|+....+..+.+++.+.+....+..... ...+..+.+..+...+.......+..+ +..+.+ ..+...
T Consensus 256 g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 333 (382)
T PRK10091 256 GRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAF 333 (382)
T ss_pred heeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHH
Confidence 9999999999988877777666665544333332222 222222232233333222223333333 345544 346778
Q ss_pred hHHhhHHHHHHHHhccch
Q psy13668 296 ALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 296 ~i~~~igp~l~g~l~~~~ 313 (513)
++|.++||.+.|.+.|.+
T Consensus 334 ~~g~~~Gp~~~G~l~~~~ 351 (382)
T PRK10091 334 NLGSAIGAYCGGMMLTLG 351 (382)
T ss_pred HHHHHHHHHHhHHHHHcc
Confidence 999999999999998753
No 18
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.76 E-value=2.3e-16 Score=165.47 Aligned_cols=283 Identities=13% Similarity=0.099 Sum_probs=185.7
Q ss_pred echhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhh-------
Q psy13668 6 INNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQ------- 76 (513)
Q Consensus 6 ~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~------- 76 (513)
..+.++.+++| +|++..++...+..+|..+++.++|++.|+. |||++|++.+++++.......+.....+
T Consensus 110 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (485)
T TIGR00711 110 LSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRWIFLINVPIGIIVVVVAFFILPRDKPAASENF 188 (485)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-CceehhhhhhHHHHHHHHHHHHHcCCccccccCCC
Confidence 34567788884 6778899999999999999999999999999 9999999887766655544433332211
Q ss_pred --hHHHHHH-----HHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCC
Q psy13668 77 --IGNVVSM-----AVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNL 149 (513)
Q Consensus 77 --~g~~~~~-----~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (513)
.+..+.. ...........+|...-.+.............+..++..+++|..
T Consensus 189 d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 247 (485)
T TIGR00711 189 DFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLV--------------------- 247 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCcc---------------------
Confidence 1111100 000000111114432211111111111101111111111111111
Q ss_pred CCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668 150 PPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPF 229 (513)
Q Consensus 150 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 229 (513)
..+++++++++...+..++.....+....++|.|+++.+|+++.+++....+..++..+++++.|++.||.+||+.
T Consensus 248 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 323 (485)
T TIGR00711 248 ----DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL 323 (485)
T ss_pred ----CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH
Confidence 1467888999888888888888889999999999999999999999999999999999999999999999999998
Q ss_pred hhHhhHHHHHHHHHHHh-c-CC-hhHH-HHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668 230 DFSASVGPGLGILAASY-S-GC-NRLA-VTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYL 305 (513)
Q Consensus 230 ~~~~~~~~~~~~~~l~~-~-~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l 305 (513)
...+..+.+++...+.. . +. +... ....+..+.+......+.......+.+++++|.+.|+.++.+++|+.+|+.+
T Consensus 324 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i 403 (485)
T TIGR00711 324 VTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTAL 403 (485)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 88888777777766652 2 22 2222 2222233333322333333444455556889999999999999999999999
Q ss_pred HHHhccchh
Q psy13668 306 VGVLTPNWL 314 (513)
Q Consensus 306 ~g~l~~~~~ 314 (513)
.|.+.++..
T Consensus 404 ~g~~~~~~~ 412 (485)
T TIGR00711 404 ITTILTNRT 412 (485)
T ss_pred HHHHHHHHH
Confidence 999987543
No 19
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.76 E-value=5.1e-16 Score=157.00 Aligned_cols=268 Identities=14% Similarity=0.052 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHH----HH-HHHH-------H-HHHH------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGA----VG-LAWF-------A-LWMT------------------ 70 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~----~~-~~~~-------~-~~~~------------------ 70 (513)
.+...+...++..+..++.|.++||+ |.|..+...+. +. .... + +...
T Consensus 35 ~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~ 113 (375)
T TIGR00899 35 IGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAR 113 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 67777778888888888999999999 87765443211 11 0101 0 0000
Q ss_pred ----------------HHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccc
Q psy13668 71 ----------------FATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTA 134 (513)
Q Consensus 71 ----------------~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 134 (513)
......+|..+++++++.+.+.. +||+.|++.+++.++..++..+++||.|++++..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 186 (375)
T TIGR00899 114 EHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA------ 186 (375)
T ss_pred HHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc------
Confidence 00011255677778888888777 9999999988877766666555667654432111
Q ss_pred ccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHH
Q psy13668 135 VMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTY 214 (513)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~ 214 (513)
. + +.+.++.+++++++......++..........++|.|+++.+|.+..+.+.+.........++.
T Consensus 187 -~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 252 (375)
T TIGR00899 187 -L--T-----------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM 252 (375)
T ss_pred -c--C-----------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0112345667777666655555555555667789999998899999999988877777788889
Q ss_pred HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHH
Q psy13668 215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGI 294 (513)
Q Consensus 215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~ 294 (513)
+..|++.||++||+....+.+...++...+...++ .+.......+.....+...+.......+..|++++.+.++.+..
T Consensus 253 ~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (375)
T TIGR00899 253 LLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNS-LWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNT 331 (375)
T ss_pred HhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 99999999999999877766655544444333322 22222222222222334445555667788888889999999999
Q ss_pred HhHHhhHHHHHHHHhccc
Q psy13668 295 GALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 295 ~~i~~~igp~l~g~l~~~ 312 (513)
.+++..++|.+.|.+.+.
T Consensus 332 ~~~g~~~g~~~~g~~~~~ 349 (375)
T TIGR00899 332 GRVGWIIAGSVGGILAER 349 (375)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988764
No 20
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.75 E-value=3.7e-16 Score=157.70 Aligned_cols=273 Identities=14% Similarity=0.041 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------H--HHH-------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF-----------A--LWM------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~-----------~--~~~------------------- 69 (513)
.+...+...++.+++.++.|.++||+ |.|.++.+...+..+.. + ...
T Consensus 40 ~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 118 (377)
T TIGR00890 40 VAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVK 118 (377)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHH
Confidence 67788899999999999999999999 88887664221111000 0 000
Q ss_pred -----------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccc
Q psy13668 70 -----------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHK 138 (513)
Q Consensus 70 -----------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 138 (513)
+...+..+|..+++++.+.+.+.. +||+.|.+.+++.++..+...++.+++|++.+.. + +
T Consensus 119 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~ 189 (377)
T TIGR00890 119 WFPDKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKT-------N-I 189 (377)
T ss_pred HcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHheecCchhcccc-------C-c
Confidence 000001234444555555555666 9999999988888877766666665543321111 1 0
Q ss_pred chhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhh
Q psy13668 139 SNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRT 218 (513)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g 218 (513)
+. +.++.+.++.+++++++...+..++..........+.+.|.++ +|.+..+.+.+.....++..++++..|
T Consensus 190 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g 261 (377)
T TIGR00890 190 EV-------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLG 261 (377)
T ss_pred cc-------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011233677888888887777776666666666777777655 688888899999999999999999999
Q ss_pred hhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHH-HHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHh
Q psy13668 219 ILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLA-VTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGA 296 (513)
Q Consensus 219 ~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~ 296 (513)
++.||++||+....+..+..++...+...+..... ......+.....+...+.......|.. ++++|++.|+.+....
T Consensus 262 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 341 (377)
T TIGR00890 262 ALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKA 341 (377)
T ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHH
Confidence 99999999998888877777777666554432221 111122222223333344445555665 5679999999999999
Q ss_pred HHhhHHHHHHHHhccc
Q psy13668 297 LSGTVSPYLVGVLTPN 312 (513)
Q Consensus 297 i~~~igp~l~g~l~~~ 312 (513)
+++.++|.+.|.+.+.
T Consensus 342 ~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 342 VAGIFGGLIASHALTE 357 (377)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988764
No 21
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.74 E-value=7.5e-17 Score=166.89 Aligned_cols=202 Identities=11% Similarity=0.055 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH----HHHH-----------HHHHHHHh-------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG----LAWF-----------ALWMTFAT------------- 73 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~----~~~~-----------~~~~~~~~------------- 73 (513)
.+...+...++..++.++.|++.||+ |.|..+.....+. .... ........
T Consensus 63 ~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~ 141 (438)
T TIGR00712 63 LGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGR 141 (438)
T ss_pred hHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHH
Confidence 56778888999999999999999999 8776554311111 0000 00000000
Q ss_pred --------------------hhhhHHHHHHHHHHHHHh-ccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccc--hhc
Q psy13668 74 --------------------GAQIGNVVSMAVSGLLIR-YLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTH--YVA 130 (513)
Q Consensus 74 --------------------~~~~g~~~~~~~~~~l~~-~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~--~~~ 130 (513)
...+|..+++++.+.... .. +||..|++.++++++..+...++.+|+|++.+. .++
T Consensus 142 ~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 220 (438)
T TIGR00712 142 TMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN-DWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEE 220 (438)
T ss_pred HHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchh
Confidence 001344555555444333 35 999999998888877766666677776653211 100
Q ss_pred ccccccccchhhhhccCCC--CCCc-hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH
Q psy13668 131 YGTAVMHKSNRFIFSFQNL--PPTP-WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN 207 (513)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~--~~~~-~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~ 207 (513)
.+ ++...+..++.++. .+.. .+.+++++.+|...+..++.+...++..+|+|.|+++..|+|+.++++......
T Consensus 221 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~ 297 (438)
T TIGR00712 221 YR---NDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYE 297 (438)
T ss_pred cc---cccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHH
Confidence 00 00000000000000 0001 124678899999888888888888899999999999988999999999999999
Q ss_pred HHHHHHHHhhhhhcCCCcccc
Q psy13668 208 RSVIVTYKMRTILSGPRLTSP 228 (513)
Q Consensus 208 ~~~~ig~~~~g~l~dr~~~~~ 228 (513)
+.+.++++..|+++||+++++
T Consensus 298 ~~~~ig~~~~g~l~dr~~~~~ 318 (438)
T TIGR00712 298 YAGIPGTLLCGWMSDKVFKGN 318 (438)
T ss_pred HHHHHHHHHHHHHHHHhccCc
Confidence 999999999999999986544
No 22
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.74 E-value=6.7e-16 Score=158.15 Aligned_cols=271 Identities=15% Similarity=0.080 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH----------------HH----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL----------------WM---------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~----------------~~---------------- 69 (513)
.+...+...++..++.++.|++.||+ |.|.++.....+..+..+. ..
T Consensus 52 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 130 (406)
T PRK11551 52 MGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSE 130 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 67788889999999999999999999 9888877532211111000 00
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+......+|..+++.++..+.+.. +||+.|++.+++.+...+...++.||+|++.+.. + .+
T Consensus 131 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~-----~~ 203 (406)
T PRK11551 131 AVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA-AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAA-G-----AG 203 (406)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhcc-C-----cc
Confidence 000111245566666666666666 9999999877766665555555666654321110 0 00
Q ss_pred cchhhhhccCCCCCCchhhhcc---chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHH
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIAT---SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTY 214 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~ 214 (513)
++++. ..+..++ .+..+..++..++.....+....|.|.++++ .|++..+.+.......++.++++
T Consensus 204 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~ 272 (406)
T PRK11551 204 KQRAP----------VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGS 272 (406)
T ss_pred hhhhh----------hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHH
Confidence 00000 0011222 2334444455555566677888899999987 69999999999999999999999
Q ss_pred HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHH
Q psy13668 215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGG 293 (513)
Q Consensus 215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~ 293 (513)
+..|++.||.+||+....+.+...+++..+...++.....+..+..+.+ .....+.......+.. +++||++.|+.+.
T Consensus 273 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 351 (406)
T PRK11551 273 LLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF-VVGGQSVLYALAPLFYPTQVRGTGVGAAVA 351 (406)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHcchhhhhhhhhHHHH
Confidence 9999999999999887776666656555555444333222222222222 2233444555556665 5679999999999
Q ss_pred HHhHHhhHHHHHHHHhccc
Q psy13668 294 IGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 294 ~~~i~~~igp~l~g~l~~~ 312 (513)
..++++.++|.+.|.+.+.
T Consensus 352 ~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 352 VGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred hhhHHHHHHhhhHhhhhcc
Confidence 9999999999999998874
No 23
>PRK03699 putative transporter; Provisional
Probab=99.74 E-value=2e-15 Score=154.04 Aligned_cols=268 Identities=12% Similarity=0.059 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HH-----HHHHHHH------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WF-----ALWMTFA------------------ 72 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~-----~~~~~~~------------------ 72 (513)
.+...+...+|..++.++.|++.||+ |.|.++.....+..+ .. .....+.
T Consensus 44 ~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~ 122 (394)
T PRK03699 44 MSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITH 122 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhh
Confidence 56677788899999999999999999 888776532211100 00 0000000
Q ss_pred ---------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 73 ---------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 73 ---------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
....++..++|.+.+.+.....+||+.|.+.+++.++..++.+ . ++.|+..+.. ++
T Consensus 123 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~-~-~~~p~~~~~~-------~~ 193 (394)
T PRK03699 123 VYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL-F-SEFPALGKHA-------PK 193 (394)
T ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH-h-cCCccccccC-------cc
Confidence 0001344566666666554323999999988877766544333 2 3333211111 10
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
++ ++.. ++ ..+++++...+..++.....+.+..|+|.|+++.+|+|..+.+.+.+...++..+|++..
T Consensus 194 ~~-------~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 261 (394)
T PRK03699 194 AD-------KPVA----KE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIF 261 (394)
T ss_pred cc-------Cccc----cc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHH
Confidence 00 0000 11 124667777777777777888899999999999999999999999999999999999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhH
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGAL 297 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i 297 (513)
|+++||+++|+.......+..+.+..+...++........+..+. +.+...+.......+..|++++...+..+...++
T Consensus 262 g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 340 (394)
T PRK03699 262 SFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGF-FSSAIYTTIITLGSQQTKVASPKLVNFILTCGTI 340 (394)
T ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhH
Confidence 999999999988777666655555554444433333222233322 2333444445555566677778888999999999
Q ss_pred HhhHHHHHHHHhccc
Q psy13668 298 SGTVSPYLVGVLTPN 312 (513)
Q Consensus 298 ~~~igp~l~g~l~~~ 312 (513)
|+.++|.+.|.+.+.
T Consensus 341 g~~i~p~~~G~l~~~ 355 (394)
T PRK03699 341 GTMLTFVVTSPIVAH 355 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988874
No 24
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.74 E-value=1.3e-15 Score=159.92 Aligned_cols=275 Identities=17% Similarity=0.132 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH----HHHHH---------------HHHHHHhh------------
Q psy13668 26 MAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG----LAWFA---------------LWMTFATG------------ 74 (513)
Q Consensus 26 ~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~----~~~~~---------------~~~~~~~~------------ 74 (513)
.+...+|..++.++.|++.||+ |+|.++.+...+. ++.+. +...+..+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~ 141 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKY-GRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI 141 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH
Confidence 4667799999999999999999 9998887532111 11100 00000001
Q ss_pred ---------------------hhhHHHHHHHHHHHHH--------hccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc
Q psy13668 75 ---------------------AQIGNVVSMAVSGLLI--------RYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES 125 (513)
Q Consensus 75 ---------------------~~~g~~~~~~~~~~l~--------~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~ 125 (513)
...|..+++.+...+. ..+ |||++|++.++++++ .++.....+|+|+..
T Consensus 142 ~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~-gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~ 219 (490)
T PRK10642 142 FVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDW-GWRIPFFIALPLGII-GLYLRHALEETPAFQ 219 (490)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCc-cHHHHHHHHHHHHHH-HHHHHHcCCCChhHH
Confidence 0123333333322222 245 999999986655443 333333455554321
Q ss_pred cchhcccccccccchhhhhccCCCCCCchhhhccc-hhHHH-HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHh
Q psy13668 126 THYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATS-APVIG-LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLIS 203 (513)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~ 203 (513)
... ++.+++..+...+.++.++++++++ ++.+. .....++....+|++..|+|.|+++.+|++..+..+..
T Consensus 220 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 292 (490)
T PRK10642 220 QHV-------DKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLII 292 (490)
T ss_pred HHH-------HhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 111 0000000000001123345566653 33332 33334455677888999999999988899988888888
Q ss_pred chhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH-HHHHHhcCC-hhHHHHH-HHHHHHHHHhhhhhhHHHhhcccC
Q psy13668 204 GWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG-ILAASYSGC-NRLAVTV-SFTLGMGTMGAFLPSLKVNALDLS 280 (513)
Q Consensus 204 ~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~-~~~l~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
....++..++.+..|+++||+|||+....+.+...++ ...+..... +...... .+..+. +.+...+.......+++
T Consensus 293 ~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~g~~~~~~~~~~ 371 (490)
T PRK10642 293 IAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAV-ILNCFTGVMASTLPAMF 371 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHC
Confidence 8888899999999999999999999877666543322 222222222 2222221 122222 12222333334444556
Q ss_pred c-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 281 P-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 281 p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
| +.||++.|+.+..+.+++.++|.+.+.+.+
T Consensus 372 p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~ 403 (490)
T PRK10642 372 PTHIRYSALAAAFNISVLVAGLTPTLAAWLVE 403 (490)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 669999998777777888999999988775
No 25
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.74 E-value=7e-16 Score=155.74 Aligned_cols=287 Identities=13% Similarity=0.034 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------H----HHHHh-----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------W----MTFAT----------------- 73 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~----~~~~~----------------- 73 (513)
.+...+...++..++.++.|++.||+ |.|+++.....+..+.... + ..+..
T Consensus 32 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 110 (379)
T TIGR00881 32 LGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTK 110 (379)
T ss_pred HHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHH
Confidence 67788888999999999999999999 8887766432221111100 0 00000
Q ss_pred ----------------hhhhHHHHHHH-HHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668 74 ----------------GAQIGNVVSMA-VSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM 136 (513)
Q Consensus 74 ----------------~~~~g~~~~~~-~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 136 (513)
...+|..++++ ++..+.+.. +||+.|++.+++.++..+...++.+++|++++.. +..+. +
T Consensus 111 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~ 187 (379)
T TIGR00881 111 WFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-SWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLP-PAEEM-P 187 (379)
T ss_pred hcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-CchhHHHHHHHHHHHHHHHHheeeCCCccccccC-ccccC-c
Confidence 00256667773 555555666 9999999888877776666666666655432211 00000 0
Q ss_pred ccchhhhhccC----CCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668 137 HKSNRFIFSFQ----NLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV 212 (513)
Q Consensus 137 ~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i 212 (513)
+++.+...+.. +..+...+.+++++.++...+..++.......+..|.|.|+++.+|++..+.+.......++..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 267 (379)
T TIGR00881 188 NEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLV 267 (379)
T ss_pred ccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcch
Confidence 00000000000 11112345678889999888888888888889999999999999999999999999999999999
Q ss_pred HHHhhhhhcCCCcc-cchhhHh-hH-HHHHHHHHHHhcCChhHHH--HHHHHHHHHHHhhhhhhHHHhhcccC-cchhHH
Q psy13668 213 TYKMRTILSGPRLT-SPFDFSA-SV-GPGLGILAASYSGCNRLAV--TVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGT 286 (513)
Q Consensus 213 g~~~~g~l~dr~~~-~~~~~~~-~~-~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~ 286 (513)
++++.|++.||..+ |+..... .. ...++.......+...... ...+..+.. .....+.......+.. +++||+
T Consensus 268 ~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~ 346 (379)
T TIGR00881 268 GTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFL-VYGPQMLIGVIASELAPKKAAGT 346 (379)
T ss_pred hHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHH-HhhhhHHHHHHHHHhcCcchhHH
Confidence 99999999998643 3332221 11 1222222222222222111 222222222 2222223334455555 567999
Q ss_pred HHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 287 LMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 287 ~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
+.|+.+....+++.++|.+.|.+.|..
T Consensus 347 ~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 347 AAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred HHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 999999999999999999999988743
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.74 E-value=3.2e-15 Score=152.44 Aligned_cols=266 Identities=13% Similarity=0.093 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------HH-------------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------WM------------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~~------------------------- 69 (513)
.+...+...++..++.++.|.+.||+ |+|.++.....+..+.... +.
T Consensus 57 ~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 135 (394)
T PRK10213 57 AGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMR 135 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56677788999999999999999999 9998876433222111100 00
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+......+|..++|++++.+.+.. |||+.|++.++++++..+......|+.|+++ ++
T Consensus 136 ~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~----------~~ 204 (394)
T PRK10213 136 LVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAVMGVLCIFWIIKSLPSLPGEP----------SH 204 (394)
T ss_pred HcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHHHHHHCCCCCccc----------cc
Confidence 111111356778888999888888 9999999887766654433333334332111 00
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
. ..+.++.+++|+++...+..++.....+...++.++++.+.+|++..+.+.......++..+++++.
T Consensus 205 ~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~ 272 (394)
T PRK10213 205 Q------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLS 272 (394)
T ss_pred c------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 0 0112567889999887777667667777777787555556679999999999999999999999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHH-HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHh
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLG-ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGA 296 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~ 296 (513)
+++.||.+++ ...........+ +.+....+.........+..+. ..+...+.......+..|++.+.+.+......+
T Consensus 273 ~~l~~r~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (394)
T PRK10213 273 SFILKRSVKL-ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL-TFALVPVGWSTWITRSLADQAEKAGSIQVAVIQ 350 (394)
T ss_pred HHHHhccchh-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHH
Confidence 9999995444 333333332333 2322222222222222222222 234444555545555567778888888888889
Q ss_pred HHhhHHHHHHHHhccch
Q psy13668 297 LSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 297 i~~~igp~l~g~l~~~~ 313 (513)
++..+||.+.|.+.|..
T Consensus 351 lg~~~G~~l~G~l~~~~ 367 (394)
T PRK10213 351 LANTCGAAIGGYALDNI 367 (394)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999998743
No 27
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.74 E-value=2e-15 Score=154.39 Aligned_cols=272 Identities=18% Similarity=0.121 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH----H-----------HHHHHHHHhh------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA----W-----------FALWMTFATG------------ 74 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~----~-----------~~~~~~~~~~------------ 74 (513)
.+...+.+.++..++.++.|.+.||+ |.|.++.....+..+ . .........+
T Consensus 50 ~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~ 128 (402)
T TIGR00897 50 SASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLV 128 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHH
Confidence 67778889999999999999999999 888877642211110 0 0000000000
Q ss_pred ---------------------hhhHH-HHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668 75 ---------------------AQIGN-VVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG 132 (513)
Q Consensus 75 ---------------------~~~g~-~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 132 (513)
..+|. .+++++++.+.+.. ||+..++..........++..++.++++++++ .
T Consensus 129 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 202 (402)
T TIGR00897 129 WVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF-GEMNTLWSALAFVLTGGVIALFSNKDIFTPQH-M---- 202 (402)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-chHHHHHHHHHHHHHHHHHHHhccCCCCCccc-c----
Confidence 01333 35566666776666 87665554333333333333344454322111 0
Q ss_pred ccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668 133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV 212 (513)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i 212 (513)
+++++ .++.+..+++++++|+++...+..++.....+++.+|.|.|+++ +|++..+.+.+.....+++.+
T Consensus 203 ---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~i 272 (402)
T TIGR00897 203 ---QTREK------FSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIV 272 (402)
T ss_pred ---cCCcc------hhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHH
Confidence 10000 00001124568899999988888888888889999999999866 799999999888889999999
Q ss_pred HHHhhhhhcCCCcccchhh-HhhHHHHHHHHHHHh---c-CChhHHH-HHHHHHHHHHHhhhhhhHHHhhcccCcchhHH
Q psy13668 213 TYKMRTILSGPRLTSPFDF-SASVGPGLGILAASY---S-GCNRLAV-TVSFTLGMGTMGAFLPSLKVNALDLSPNYAGT 286 (513)
Q Consensus 213 g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~l~~---~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~ 286 (513)
+++..|+++||++||+... .+.+...++...+.. . ..+.... +..+..+.+... ..+ ......+..|+++|+
T Consensus 273 g~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~-~~~~~~~~~~~~~g~ 350 (402)
T TIGR00897 273 FNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAG-YVP-LAAVFPTLAPKHKGA 350 (402)
T ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHH-HHH-HHHHHHhhCcchhHH
Confidence 9999999999999887653 233333333222221 1 1222222 222223332222 223 334556777899999
Q ss_pred HHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 287 LMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 287 ~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
+.|+.|...++++.++|.+.|.+.+.
T Consensus 351 ~~g~~~~~~~lg~~~gp~i~g~l~~~ 376 (402)
T TIGR00897 351 AMSVLNLSAGLSAFLAPAIAVLFIGF 376 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998874
No 28
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.73 E-value=3.3e-15 Score=151.57 Aligned_cols=269 Identities=13% Similarity=0.072 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------HH-------------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------WM------------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~~------------------------- 69 (513)
.+...+...++..++.++.|.+.||+ |.|..+.....+..+.... +.
T Consensus 42 ~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 120 (385)
T TIGR00710 42 VQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRD 120 (385)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHH
Confidence 67788888999999999999999999 8887766422111111100 00
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
.......+|..+++.+++.+.+.. +||+.|.+.++..++..+...+..||.+++++.. ++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 192 (385)
T TIGR00710 121 IYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAFLSLAGILLSALIFFILPETLPYEARI-------QI 192 (385)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC-------CH
Confidence 000011355677788888888777 9999999888777766655555555543221110 00
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
+ + ....+++.+++++++...+...+.....+....+.|.++++.+|+++.+.+.+.....++..+++++.
T Consensus 193 ~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 262 (385)
T TIGR00710 193 S--T--------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLN 262 (385)
T ss_pred H--H--------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 01123567888988888877777777788888899999998899999999999999999999999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHHHHHhcC--C-hhHHH-HHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGILAASYSG--C-NRLAV-TVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG 293 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~--~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~ 293 (513)
|++.||+++|+....+.....++...+.... . ..... .....+.....+...+.......|..|+++|++.++.+.
T Consensus 263 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 342 (385)
T TIGR00710 263 GRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGT 342 (385)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHH
Confidence 9999999999887777666555544443321 1 12222 222222222234444555556666678889999999999
Q ss_pred HHhHHhhHHHHHHHHh
Q psy13668 294 IGALSGTVSPYLVGVL 309 (513)
Q Consensus 294 ~~~i~~~igp~l~g~l 309 (513)
....++.+.+.+.+.+
T Consensus 343 ~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 343 LRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8887777776666633
No 29
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.73 E-value=3.2e-15 Score=152.47 Aligned_cols=213 Identities=12% Similarity=-0.004 Sum_probs=142.0
Q ss_pred hhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchh
Q psy13668 76 QIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWG 155 (513)
Q Consensus 76 ~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (513)
++|.+++|++++.+.++. |||..|.+.++..++..+...++.||.+++++.. + ++.+
T Consensus 153 ~lg~~~g~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~-------------- 209 (393)
T PRK15011 153 SLAWVIGPPLAYALAMGF-SFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLA-------T-GTLE-------------- 209 (393)
T ss_pred HHHHHHhhHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccc-------c-cccc--------------
Confidence 356778888888888888 9999999988887777766666667654332211 1 0000
Q ss_pred hhccc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668 156 KIATS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS 234 (513)
Q Consensus 156 ~~l~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 234 (513)
...++ +..+......+......+.+..+.|.|+++.+|++..+.+.+.....+..++++++.|+++||++||+....+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~ 289 (393)
T PRK15011 210 APRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAA 289 (393)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 00111 12233333334444455566779999999999999999998888777888899999999999999998766655
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 235 VGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
....+....+...+ +....+....+.....+...+.......+..|+++|++.++.+...++|..++|.+.|.+.+.
T Consensus 290 ~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~ 366 (393)
T PRK15011 290 VAGVCFYAGMLMAH-SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEI 366 (393)
T ss_pred HHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54444433333322 222222222222223333333444556777888899999999999999999999999988764
No 30
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.73 E-value=8.8e-16 Score=149.65 Aligned_cols=218 Identities=17% Similarity=0.088 Sum_probs=176.8
Q ss_pred hHHHHHHHHHHHHHhccCC---chHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCc
Q psy13668 77 IGNVVSMAVSGLLIRYLGG---WTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTP 153 (513)
Q Consensus 77 ~g~~~~~~~~~~l~~~~~g---Wr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (513)
+|..+...++..+.... + ||....+..+..++..+..++..+|.|+.++.. ++.+. .+
T Consensus 150 ~G~av~q~~~P~v~~~~-g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~-------~~~~~-----------~~ 210 (417)
T COG2223 150 LGVAVAQLVAPLVAVAF-GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV-------KPQLP-----------AQ 210 (417)
T ss_pred ccHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc-------cccch-----------hH
Confidence 45555556666666666 7 999988888888887777788888887754333 21110 22
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668 154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA 233 (513)
Q Consensus 154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 233 (513)
.+.++++++.|.+++.++....++.++..++|.|++++++.+..+++.+.....+.+.+.++.+|+++||+|.+|+....
T Consensus 211 ~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~ 290 (417)
T COG2223 211 LKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAV 290 (417)
T ss_pred HHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHH
Confidence 36788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcC------ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 234 SVGPGLGILAASYSG------CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 234 ~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
+..++++...+.+.. .+.......+.....+.+............++|++.|.+.|+...++.+|+..-|...|
T Consensus 291 f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g 370 (417)
T COG2223 291 FVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFG 370 (417)
T ss_pred HHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHH
Confidence 998888888877665 22333344444455566777778888888999999999999999999999999999998
Q ss_pred Hhccch
Q psy13668 308 VLTPNW 313 (513)
Q Consensus 308 ~l~~~~ 313 (513)
...+..
T Consensus 371 ~~~~~t 376 (417)
T COG2223 371 VSLDLT 376 (417)
T ss_pred HHHHhc
Confidence 887754
No 31
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.73 E-value=4.1e-15 Score=152.39 Aligned_cols=272 Identities=17% Similarity=0.060 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------HHHHHH-------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF-----------ALWMTF------------------- 71 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~-----------~~~~~~------------------- 71 (513)
.+...+...++..++.++.|.+.||+ |.|.++.....+..+.. +....+
T Consensus 50 ~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~ 128 (406)
T PRK15402 50 VPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQE 128 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHH
Confidence 56667889999999999999999999 88887664221111000 000000
Q ss_pred --------------HhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 72 --------------ATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 72 --------------~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
......+..++|.+++.+.+.. +||+.|++.+++.++..+...+..||++++.+. +.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 199 (406)
T PRK15402 129 SFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-PWRGMFVLFAALAALSFFGLWRAMPETAGRVGE--------KL 199 (406)
T ss_pred HhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHHHHHHHhCCCCCccccc--------cc
Confidence 0000134466777777777777 999999988877776655554455544321110 00
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
+.++. ..+++.++++++++...+..++.....+...++.|.++++.+|+++.+.+.......++..++++..
T Consensus 200 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~ 271 (406)
T PRK15402 200 SLKEL--------GRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTL 271 (406)
T ss_pred cHHHH--------HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 1123567889999888887777777677777889999988899999999988888888899999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHHHHHhcC---C-hhHHHHH-HHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHH
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGILAASYSG---C-NRLAVTV-SFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVG 292 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~---~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~ 292 (513)
|+++||+++|+....+.+...++...+.... . +...... ....+.+ .+...+..........++++|++.++.+
T Consensus 272 g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 350 (406)
T PRK15402 272 ARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG-IGLANAGLYRLTLFSSDVSKGTVSAAMG 350 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH-HHHHhhhHHHHHhhhccccccHHHHHHH
Confidence 9999999999888777766665555544321 1 2222222 2222222 2222333333334445688999999999
Q ss_pred HHHhHHhhHHHHHHHHhccc
Q psy13668 293 GIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 293 ~~~~i~~~igp~l~g~l~~~ 312 (513)
....++..+|+.+.+.+.+.
T Consensus 351 ~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 351 MLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred HHHHHHHHHHHHHHHhcccC
Confidence 99999999999999888764
No 32
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.72 E-value=1.5e-15 Score=153.04 Aligned_cols=269 Identities=15% Similarity=0.048 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HHH--HH----HHHHhh---------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WFA--LW----MTFATG--------------- 74 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~~--~~----~~~~~~--------------- 74 (513)
.+...+...++.+++.++.|+++||+ |.|.++.+...+..+ +.- .+ ..+..+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 117 (366)
T TIGR00886 39 LGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISF 117 (366)
T ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHH
Confidence 67788889999999999999999999 888776542211111 000 00 000000
Q ss_pred -----------------hhhHHHHHHHHHHHHHh----------ccCCchHHH-HHHHHHHHHHHHHHHHhccCCCCCcc
Q psy13668 75 -----------------AQIGNVVSMAVSGLLIR----------YLGGWTSVF-YVFGAVGLAWFALWMTFASSDPSEST 126 (513)
Q Consensus 75 -----------------~~~g~~~~~~~~~~l~~----------~~~gWr~~f-~i~~~~~~~~~~~~~~~~~~~p~~~~ 126 (513)
...|..+++.+++.+.. .. +||+.| ...+++..+..++...+.+++|++++
T Consensus 118 ~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (366)
T TIGR00886 118 FFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHL-AWGWAFVIVPAGILLLPALLIFFVGADTPPGKP 196 (366)
T ss_pred hcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccc-cccchhHHHHHHHHHHHHHHHHHhcccCCcccc
Confidence 01334444444443332 23 899999 44455555555555555566554322
Q ss_pred chhcccccccccchh-hhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhch
Q psy13668 127 HYVAYGTAVMHKSNR-FIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGW 205 (513)
Q Consensus 127 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~ 205 (513)
+. .+.+.+ .....++......++.+++++++...+..++.....+.+..+.|.|+++.+|++..+++.+...
T Consensus 197 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 269 (366)
T TIGR00886 197 AT-------GKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASL 269 (366)
T ss_pred cc-------hhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 11 100000 0000000001134667888999888888887777788889999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC---hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc
Q psy13668 206 PNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC---NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN 282 (513)
Q Consensus 206 ~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 282 (513)
..+.+.+++++.|+++||+++|+....+......+...+..... +.......+.......+...+.......++.|+
T Consensus 270 ~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 349 (366)
T TIGR00886 270 GGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR 349 (366)
T ss_pred HHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchh
Confidence 99999999999999999999988776666555555444443322 333333333333344455555566667778889
Q ss_pred hhHHHHHHHHHHHhHHh
Q psy13668 283 YAGTLMALVGGIGALSG 299 (513)
Q Consensus 283 ~~g~~~gi~~~~~~i~~ 299 (513)
++|+++|+.+..+++|+
T Consensus 350 ~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 350 ATGAVSGLVGAIGNLGG 366 (366)
T ss_pred hcccHHHHHHHhccCCC
Confidence 99999999999887763
No 33
>KOG2533|consensus
Probab=99.71 E-value=3.9e-16 Score=160.39 Aligned_cols=197 Identities=17% Similarity=0.135 Sum_probs=150.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------------------------------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF----------------------------------- 65 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~----------------------------------- 65 (513)
-.+...+.+.+|.+++.+.++.|.||+ +-+......+++...+.
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg 160 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILG 160 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 367788889999999999999999999 64444443332221111
Q ss_pred ---------HHHHHHHhhhhhHHHHHHHHHHHHHh-----ccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668 66 ---------ALWMTFATGAQIGNVVSMAVSGLLIR-----YLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131 (513)
Q Consensus 66 ---------~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 131 (513)
..+.++....++|+++++++...+.+ ...||||.|++.|++.++..++.++++|+.|++....
T Consensus 161 ~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl--- 237 (495)
T KOG2533|consen 161 NWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFL--- 237 (495)
T ss_pred hhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcccc---
Confidence 11224444446888888888777532 1239999999999999999999999999999876544
Q ss_pred cccccccchhh----hh-cc-----CCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhH
Q psy13668 132 GTAVMHKSNRF----IF-SF-----QNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDL 201 (513)
Q Consensus 132 ~~~~~~~~~~~----~~-~~-----~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~ 201 (513)
+++|+.. .+ +. ++.++..+++.++++.+|...+..++.....+++.+|+|.|+.+..|+|..++..
T Consensus 238 ----~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ 313 (495)
T KOG2533|consen 238 ----TDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANL 313 (495)
T ss_pred ----chHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcc
Confidence 4333211 11 11 1123456788899999999999999999999999999999999966799999999
Q ss_pred HhchhHHHHHHHHHhhhhhcCCCc
Q psy13668 202 ISGWPNRSVIVTYKMRTILSGPRL 225 (513)
Q Consensus 202 ~~~~~~~~~~ig~~~~g~l~dr~~ 225 (513)
+.++..++++++.+++|+++||..
T Consensus 314 ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 314 LSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred ccchHHhhhHHHHHHHHHHHHHHh
Confidence 999999999999999999999953
No 34
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.71 E-value=5.3e-15 Score=150.99 Aligned_cols=284 Identities=15% Similarity=0.092 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH----------------HHH----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA----------------LWM---------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~----------------~~~---------------- 69 (513)
.+...+...++.+++.++.|++.||+ |.|.++.....+..+... +..
T Consensus 49 ~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~ 127 (405)
T TIGR00891 49 AASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIE 127 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 56778888999999999999999999 888877643221111000 000
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYL-GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM 136 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~-~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 136 (513)
+......+|..+++.+.+.+.+.. .+||+.|.+.++..++.. +.....||+++.++...+ +
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~ 201 (405)
T TIGR00891 128 SWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAG-----K 201 (405)
T ss_pred hCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhh-----h
Confidence 011111356677777777776655 149999987554443332 333344544321111100 0
Q ss_pred ccchhhhhc---cCCCCC-------Cchhhhc-cc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhc
Q psy13668 137 HKSNRFIFS---FQNLPP-------TPWGKIA-TS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISG 204 (513)
Q Consensus 137 ~~~~~~~~~---~~~~~~-------~~~~~~l-~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~ 204 (513)
++.++...+ .+...+ ...++.. +. +.+........+.+........+.|.|+.+.+|++..+.+.+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 281 (405)
T TIGR00891 202 ALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVV 281 (405)
T ss_pred hhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHH
Confidence 000000000 000000 0000000 01 11222333334444555567788999999889999999999999
Q ss_pred hhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-ch
Q psy13668 205 WPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NY 283 (513)
Q Consensus 205 ~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~ 283 (513)
...++.++++++.|++.||++||+....+.....+....+.....+.........+...+.....+.......+..| ++
T Consensus 282 ~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
T TIGR00891 282 FSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ 361 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch
Confidence 99999999999999999999999887776665533333222222332222222122122222333444455566665 67
Q ss_pred hHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 284 AGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 284 ~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
+|++.|+.+...++++.++|.+.|.+.|.
T Consensus 362 ~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 362 RAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998874
No 35
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.71 E-value=8.3e-15 Score=151.34 Aligned_cols=157 Identities=9% Similarity=0.002 Sum_probs=106.7
Q ss_pred chhhhccchhHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668 153 PWGKIATSAPVIGLIIAQIG-HDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDF 231 (513)
Q Consensus 153 ~~~~~l~~~~~~~~~l~~~~-~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 231 (513)
++++++++++.+...+..++ ....+|.+.+|+|.|+++.+|++..+.+.......+...++.++.|+++||++||+...
T Consensus 234 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~ 313 (432)
T PRK10406 234 SLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML 313 (432)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence 45778888888876665554 36778889999999999888999999988888888888888999999999999998776
Q ss_pred HhhHHHHHHHHHHH--hc-CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhH-HhhHHHHHH
Q psy13668 232 SASVGPGLGILAAS--YS-GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGAL-SGTVSPYLV 306 (513)
Q Consensus 232 ~~~~~~~~~~~~l~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i-~~~igp~l~ 306 (513)
....+..+...... .. ..+....+.++.++....+...+.......|.+| +.|+++.|+.+..+++ .+...|.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~ 393 (432)
T PRK10406 314 CFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVA 393 (432)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHH
Confidence 65544333322111 11 1222222222222323333334445566778886 5699999999987765 355577766
Q ss_pred HHh
Q psy13668 307 GVL 309 (513)
Q Consensus 307 g~l 309 (513)
+.+
T Consensus 394 ~~l 396 (432)
T PRK10406 394 LSL 396 (432)
T ss_pred HHH
Confidence 643
No 36
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.70 E-value=4.2e-15 Score=153.25 Aligned_cols=280 Identities=14% Similarity=0.038 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHH---------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWM--------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~--------------------- 69 (513)
.+...+...++..++.++.|+++||+ |.|.++.....+..+... ...
T Consensus 55 ~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~ 133 (426)
T PRK12307 55 GAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVE 133 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 46677788999999999999999999 988887643221111000 000
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+...+..+|.++++.+.+.+.+.. +||+.|++.....++ .+ ++....|++++...+ . .+
T Consensus 134 ~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w~~~f~i~~~~~~~-~~---~~~~~~p~~~~~~~~-~---~~ 204 (426)
T PRK12307 134 SWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GWRAAFFVGLLPVLL-VI---YIRARAPESKEWEEA-K---LS 204 (426)
T ss_pred hCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CHHHHHHHHHHHHHH-HH---HHHHHCCCChHHHHh-h---hh
Confidence 000111245566666666666666 999999874332222 11 111222222111100 0 00
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHH---HHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHH
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIA---QIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTY 214 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~---~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~ 214 (513)
++.+..++..+....+++++++++.++..... .+......+.+..++|.|+++ .|++..+.+...+...++..+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~ 283 (426)
T PRK12307 205 GKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGN 283 (426)
T ss_pred ccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000000000011245677888776543332 223333444567899999987 59999999998889999999999
Q ss_pred HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH-hhhhhhHHHhhcccCc-chhHHHHHHHH
Q psy13668 215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTM-GAFLPSLKVNALDLSP-NYAGTLMALVG 292 (513)
Q Consensus 215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p-~~~g~~~gi~~ 292 (513)
+..|++.||++||+....+.+...+..+.+...+...........++.++. ....+.......|..| +++|++.|+.+
T Consensus 284 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~ 363 (426)
T PRK12307 284 IVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIY 363 (426)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHH
Confidence 999999999999998877776665555444433322222222222222221 1222334445566665 56999999999
Q ss_pred HHHhHHhhHHHHHHHHhccc
Q psy13668 293 GIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 293 ~~~~i~~~igp~l~g~l~~~ 312 (513)
....+++.++|.+.|.+.+.
T Consensus 364 ~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 364 NLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred HHHhHHHHHHHHHHHHHHHc
Confidence 99999999999999888754
No 37
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.70 E-value=7.3e-16 Score=154.17 Aligned_cols=269 Identities=22% Similarity=0.280 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------HH-------------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------WM------------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~~------------------------- 69 (513)
.++..+...++..++.++.|.+.||+ |.|.++.+...+..+...+ +.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~ 112 (352)
T PF07690_consen 34 IGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIAD 112 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccc
Confidence 77888889999999999999999999 8888766422211111000 00
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+......+|..+++.+++.+.+.. +||+.|++.+++.++..++..++.+++|++++.. ++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~-------~~ 184 (352)
T PF07690_consen 113 WFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRWAFLISAILSLIAAILFILFLPEPPPPRERE-------SP 184 (352)
T ss_dssp CCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCCHHHHHHHHHHHHHHHHHCCC---STTTT---------SS
T ss_pred cchhhhhhhccccccchhhhhhhcccchhhhhhhcc-ccccccccccchhhhhhhhHhhhhhhcccccccc-------cc
Confidence 000111367788888888887776 9999999988888887765444555544433222 11
Q ss_pred cchhhhhccCCCCCC-chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcc-hhhhhHHhchhHHHHHHHHH
Q psy13668 138 KSNRFIFSFQNLPPT-PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFS-ITSVDLISGWPNRSVIVTYK 215 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s-~~~~~~~~~~~~~~~~ig~~ 215 (513)
++++. +.+.+.. .++.+.+++.+|......+......+....++|.|+++.+|++ ..+.+.......+...++++
T Consensus 185 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (352)
T PF07690_consen 185 KESES---KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSL 261 (352)
T ss_dssp TTTT-----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccc---ccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11100 0000111 2456667777775555556656677788999999988889999 88999999999999999999
Q ss_pred hhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC--hhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHH
Q psy13668 216 MRTILSGPRLTSPFDFSASVGPGLGILAASYSGC--NRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALV 291 (513)
Q Consensus 216 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~ 291 (513)
+.|++.||.++|+..........+....+..... +..... ..+..+. ..+...+.......+..| +++|++.|+.
T Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 340 (352)
T PF07690_consen 262 LAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGF-GFGIVFPILFSLIQELVPPEYRGTAFGLF 340 (352)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHH-HHHHHCHHHHHHHHCCCHTCHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999887777666666655555544332 223332 3333333 455566777777777775 7799999999
Q ss_pred HHHHhHHhhHHH
Q psy13668 292 GGIGALSGTVSP 303 (513)
Q Consensus 292 ~~~~~i~~~igp 303 (513)
+...++++.++|
T Consensus 341 ~~~~~~~~~igP 352 (352)
T PF07690_consen 341 NSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC
Confidence 999999999987
No 38
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.69 E-value=2.9e-14 Score=144.79 Aligned_cols=272 Identities=10% Similarity=-0.013 Sum_probs=183.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchH----HHHHHH-HHHHH---HH-HHHHH---------HH----------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTS----VFYVFG-AVGLA---WF-ALWMT---------FA---------- 72 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~----if~~~g-~~~~~---~~-~~~~~---------~~---------- 72 (513)
..++..+...+...+++++.|.++|+. |++. +..... ..... .. -.|.+ ..
T Consensus 40 ~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al 118 (382)
T TIGR00902 40 MIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDAL 118 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHH
Confidence 367788888999999999999999999 6422 221111 11110 00 00000 00
Q ss_pred ----------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668 73 ----------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM 136 (513)
Q Consensus 73 ----------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 136 (513)
....+|.+++|++++.+.+.. |||..|.+....... .+... ..++++++++.. +
T Consensus 119 ~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~~~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~-------~ 188 (382)
T TIGR00902 119 ANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DEQNILAILTAGLAF-MLIGF-LIKPTIPPKDAI-------P 188 (382)
T ss_pred HHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-ChhHHHHHHHHHHHH-HHHHH-HcCCCCCCCccc-------c
Confidence 001367888999999999988 999999876554322 22222 223321111000 0
Q ss_pred ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHh
Q psy13668 137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKM 216 (513)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~ 216 (513)
++ ++.+..+.++++|+|+++...+..++...+...+..+.|.|+++ +|.+..+.+.+.....++.+++.+.
T Consensus 189 ~~--------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~ 259 (382)
T TIGR00902 189 ED--------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAF 259 (382)
T ss_pred cc--------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHH
Confidence 00 00111234788999999999988888888888999999999987 7999999999999888999999999
Q ss_pred hhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH-HH
Q psy13668 217 RTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG-IG 295 (513)
Q Consensus 217 ~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~-~~ 295 (513)
.+++.||++.|+.+..+.+...+....+...++........+..+..+...... ......+.+++++++..++.+. ..
T Consensus 260 ~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~-~~~~i~~~~~~~~~~~q~~~~~~~~ 338 (382)
T TIGR00902 260 SNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLA-AMRYIAAQPGSEIAKLQALYNALAM 338 (382)
T ss_pred hHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHhhHHHHHHHHHHHHH
Confidence 999999999999999888888888877766554443333444444444333333 3444445556678999999774 56
Q ss_pred hHHhhHHHHHHHHhccch
Q psy13668 296 ALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 296 ~i~~~igp~l~g~l~~~~ 313 (513)
.++..++|.+.|.+.|..
T Consensus 339 g~g~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 339 GGLIAIFTAFAGFIYPTL 356 (382)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 799999999999888754
No 39
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.69 E-value=2.9e-14 Score=143.34 Aligned_cols=268 Identities=13% Similarity=0.034 Sum_probs=171.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH---HHH-------HH-----HH----------------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL---AWF-------AL-----WM---------------- 69 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~---~~~-------~~-----~~---------------- 69 (513)
..+...+...++..++.++.|++.||+ |.|.++.....+.. ... +. ..
T Consensus 36 ~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~ 114 (355)
T TIGR00896 36 VAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIGVGIAIINVLLPSLIKR 114 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 367888899999999999999999999 88877664221110 000 00 00
Q ss_pred -----------HHHhhhhhHHHHHHHHHHHHHhccC-CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 -----------TFATGAQIGNVVSMAVSGLLIRYLG-GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 -----------~~~~~~~~g~~~~~~~~~~l~~~~~-gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
.......+|..+++.+.+.+.+... +||+.|.+.++..++.... +.++.+++++.. ++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~ 184 (355)
T TIGR00896 115 DFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA---WIPQVRRRVAAN-------QT 184 (355)
T ss_pred hCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH---HhhhhccccCCC-------CC
Confidence 0000012445566666666655431 4999988766554433222 223221111000 00
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
.++.+.++++|++.++...+..++....++....|+|.|+++ +|++..+.+.+.+...++.+++++..
T Consensus 185 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~ 252 (355)
T TIGR00896 185 -----------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLI 252 (355)
T ss_pred -----------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 001123567888888887777777777888889999999987 59999999999999999999999999
Q ss_pred hhhcCCCc-ccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhc-ccC-cchhHHHHHHHHHH
Q psy13668 218 TILSGPRL-TSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNAL-DLS-PNYAGTLMALVGGI 294 (513)
Q Consensus 218 g~l~dr~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-p~~~g~~~gi~~~~ 294 (513)
|++.||++ ||+....+....+++...+...+...... .....+. ..+...+....... +.. +++++...++.+..
T Consensus 253 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 330 (355)
T TIGR00896 253 PALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGL-GQGGAFPLALTLIGLRSRQAAQAAALSAMAQSI 330 (355)
T ss_pred HHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHH-hhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999994 55566666666666665555544332221 2222222 23344444434333 333 45689999999999
Q ss_pred HhHHhhHHHHHHHHhccch
Q psy13668 295 GALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 295 ~~i~~~igp~l~g~l~~~~ 313 (513)
+++++.++|.+.|.+.|..
T Consensus 331 ~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 331 GYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988744
No 40
>TIGR00895 2A0115 benzoate transport.
Probab=99.69 E-value=1.5e-14 Score=147.20 Aligned_cols=284 Identities=17% Similarity=0.097 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-----------HH---------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-----------WM--------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-----------~~--------------------- 69 (513)
.+...+...++.+++.++.|++.||+ |.|.++.....+..+.... ..
T Consensus 54 ~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 132 (398)
T TIGR00895 54 LGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSE 132 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 56777788899999999999999999 8887766432211111100 00
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccch-hcc-cccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHY-VAY-GTAV 135 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~-~~~~ 135 (513)
+......+|..+++.+.+.+.+.. |||..|++.+++..+..++...+.++.++..... .+. .+..
T Consensus 133 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (398)
T TIGR00895 133 YAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIV 211 (398)
T ss_pred HcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-cceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHH
Confidence 000011256677788888888777 9999999887666665555555666654311000 000 0000
Q ss_pred c--------ccchhhhhccCC-C-CCCchhhhcc---chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHH
Q psy13668 136 M--------HKSNRFIFSFQN-L-PPTPWGKIAT---SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLI 202 (513)
Q Consensus 136 ~--------~~~~~~~~~~~~-~-~~~~~~~~l~---~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~ 202 (513)
+ +.+.+..++..+ . .+...+.+++ .+..+..++..++.....+....|.| ++.+.+|++..+.+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~ 290 (398)
T TIGR00895 212 NAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATG 290 (398)
T ss_pred HHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHH
Confidence 0 000000000000 0 0111122222 23445555555666677777888999 5555679999999999
Q ss_pred hchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-
Q psy13668 203 SGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP- 281 (513)
Q Consensus 203 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 281 (513)
.....++..+++++.|+++||+++|+.... ..+..+....+.....+.........+...+.+...+.......+..|
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 369 (398)
T TIGR00895 291 GALFNFGGVIGSIIFGWLADRLGPRVTALL-LLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT 369 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHH-HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH
Confidence 999999999999999999999999844333 333333333332222222222222222222334455556666777765
Q ss_pred chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 282 NYAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 282 ~~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
++||++.|+.+....+++.++|.+.|.+
T Consensus 370 ~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 370 AIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 6799999999999999999999999876
No 41
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.68 E-value=6.5e-15 Score=154.99 Aligned_cols=57 Identities=18% Similarity=0.092 Sum_probs=50.1
Q ss_pred HHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668 179 TIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV 235 (513)
Q Consensus 179 ~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 235 (513)
....++|.|+++.+|++..+.+.+.+...++..++++..|+++||++||+....+.+
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~ 349 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLL 349 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 355789999988889999999999999999999999999999999999987665443
No 42
>PRK11043 putative transporter; Provisional
Probab=99.68 E-value=3.7e-14 Score=145.04 Aligned_cols=266 Identities=14% Similarity=0.117 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH------HHH-----HHH-HHH---------------Hh-
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL------AWF-----ALW-MTF---------------AT- 73 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~------~~~-----~~~-~~~---------------~~- 73 (513)
.+...+...++..++.++.|+++||+ |.|.++.....+.. .+. ... .++ ..
T Consensus 43 ~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~ 121 (401)
T PRK11043 43 VSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVID 121 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 57778888999999999999999999 88877664221110 000 000 000 00
Q ss_pred ----------------hhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 74 ----------------GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 74 ----------------~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
...++..++|.+++.+.+.. |||+.|++.+++.++..+..+++ +++++++ ++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~ 189 (401)
T PRK11043 122 RYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GWQAIFATLFAITLLLILPTLRL-KPSKKAR----------KQ 189 (401)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHc-CCCCCcc----------cc
Confidence 00134557778888888887 99999998877777665544433 3322111 10
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
++ ++.++++++++++++...+...+....++.+..+.|.++++ +|++..+.++......++..+|++..
T Consensus 190 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~ 258 (401)
T PRK11043 190 SQ----------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGC 258 (401)
T ss_pred ch----------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 01123677888888876666666667777888899999876 69999999988888888999999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHHH---HHhc-CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGILA---ASYS-GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG 293 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~~---l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~ 293 (513)
+++.||+++|+.........+++... .... ..........+.+.....+...+.......+..|+++|++.|+.+.
T Consensus 259 ~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 338 (401)
T PRK11043 259 RAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNT 338 (401)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHH
Confidence 99999999888665544444433322 2221 2222222222222233344555555555556668899999999999
Q ss_pred HHhHHhhHHHHHHHHhcc
Q psy13668 294 IGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 294 ~~~i~~~igp~l~g~l~~ 311 (513)
.+..++..++.+.|.+.+
T Consensus 339 ~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 339 LQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHccC
Confidence 999999999999988876
No 43
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.68 E-value=3.4e-14 Score=143.90 Aligned_cols=268 Identities=14% Similarity=0.098 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH----------------HHH----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA----------------LWM---------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~----------------~~~---------------- 69 (513)
.+...+...++.+++.++.|.+.||+ |.|.++.....+..+... +..
T Consensus 28 ~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 106 (377)
T PRK11102 28 VQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRD 106 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888999999999999999999 877776542211111000 000
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+......+|..+++.+++.+.+.. +||+.|++.+.+.++..+...++.+|+++++++. +.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 178 (377)
T PRK11102 107 MFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALAAILAAALVFFFIPETLPKERRQ-------PF 178 (377)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHHhCCccCcccccC-------CC
Confidence 000011255677788888888877 9999999888777776655555556543221111 00
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
+.++ ...++++.+++++++...+..++.....+.+..+.|.++.+.+|+++.+.+.+.....++..++++..
T Consensus 179 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~ 250 (377)
T PRK11102 179 HLRT--------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIIN 250 (377)
T ss_pred ChHH--------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 01123567888888877777777777778888889999999899999999999999999999999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHH---HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHH
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGIL---AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGI 294 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~ 294 (513)
|++.||.++|+....+.....+... .....+...+..........+..+...........+..|+++|.+.++.+..
T Consensus 251 g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 330 (377)
T PRK11102 251 SRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTL 330 (377)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHH
Confidence 9999999999987776654433222 2222222222222222222222333344444556677788999999998776
Q ss_pred Hh-HHhhHHHHHH
Q psy13668 295 GA-LSGTVSPYLV 306 (513)
Q Consensus 295 ~~-i~~~igp~l~ 306 (513)
.+ +++.+++.+.
T Consensus 331 ~~~~g~~~g~~~~ 343 (377)
T PRK11102 331 RFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHHHHHHHH
Confidence 54 5555555543
No 44
>PRK09952 shikimate transporter; Provisional
Probab=99.67 E-value=4.9e-14 Score=145.76 Aligned_cols=157 Identities=10% Similarity=-0.002 Sum_probs=107.2
Q ss_pred hhccchhHHHHHH-HHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668 156 KIATSAPVIGLII-AQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS 234 (513)
Q Consensus 156 ~~l~~~~~~~~~l-~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 234 (513)
.++++++.+.... ..++.....|...+|.|.|+++.+|++................++.++.|+++||++||+....+.
T Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~ 323 (438)
T PRK09952 244 ALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGA 323 (438)
T ss_pred HHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 3566777666544 455556778888899999999889998876655555667778889999999999999999877766
Q ss_pred HHHHHHHHHHHh--cCCh-hHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHH-hHHhhHHHHHHHHh
Q psy13668 235 VGPGLGILAASY--SGCN-RLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIG-ALSGTVSPYLVGVL 309 (513)
Q Consensus 235 ~~~~~~~~~l~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~-~i~~~igp~l~g~l 309 (513)
++..++.+.+.. ...+ .........+.....+...+.......|..| +.|+++.|+.+..+ .++++++|.+.+.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l 403 (438)
T PRK09952 324 LIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAAL 403 (438)
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 555444332222 1222 2222222222233334445556677778776 56899999876655 48999999999998
Q ss_pred ccc
Q psy13668 310 TPN 312 (513)
Q Consensus 310 ~~~ 312 (513)
.+.
T Consensus 404 ~~~ 406 (438)
T PRK09952 404 VTY 406 (438)
T ss_pred HHh
Confidence 763
No 45
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.67 E-value=1.1e-13 Score=144.20 Aligned_cols=167 Identities=16% Similarity=0.144 Sum_probs=115.5
Q ss_pred hhhccc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchh---hhhHHhchhHHHHHHHHHhhhhhcCCCcccchh
Q psy13668 155 GKIATS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSIT---SVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD 230 (513)
Q Consensus 155 ~~~l~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~---~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 230 (513)
.+++|+ |.+....+..++....+|....+.|......++-+.. +.+....+..++..+|..+.|.+..|.+|-|..
T Consensus 303 ~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~ 382 (599)
T PF06609_consen 303 HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQ 382 (599)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHH
Confidence 567887 5677777788888888888888999998888877653 567888888899999999999999888775554
Q ss_pred -hHhhHHHHHHHHHHHhcC-ChhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 231 -FSASVGPGLGILAASYSG-CNRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 231 -~~~~~~~~~~~~~l~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
+.+.+.+.+++.++.... ++....+ ..+..+.+......+.........++++.|+++|+..+++.+|+.+|..+..
T Consensus 383 li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 383 LIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 455555555544444332 2222222 2233333333333333332323333577999999999999999999999999
Q ss_pred HhccchhhhHHHhh
Q psy13668 308 VLTPNWLAKQICNS 321 (513)
Q Consensus 308 ~l~~~~~~~~l~~~ 321 (513)
.++.+...+++.++
T Consensus 463 ~I~~n~~~~~l~~~ 476 (599)
T PF06609_consen 463 AIFTNKLPKELPKY 476 (599)
T ss_pred HHHHhhhhHhHHHH
Confidence 88887777776654
No 46
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.67 E-value=4.6e-14 Score=143.96 Aligned_cols=269 Identities=16% Similarity=0.165 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHH---------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWM--------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~--------------------- 69 (513)
.+...+...++..++.++.|.++||+ |.|.++.+...+..+... ...
T Consensus 45 ~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 123 (394)
T PRK11652 45 VQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRD 123 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 56777889999999999999999999 888876542211111000 000
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
....+..++..++|.+++.+.+.. |||+.|++.++..++..+...++.||++++++.. .
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~- 194 (394)
T PRK11652 124 LYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRACYLFLLLLGAGVTFSMARWMPETRPADARR-------T- 194 (394)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHHHHHHHHHHhCCccCccccch-------h-
Confidence 000011234456777777777777 9999999887777666555555556543221111 0
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
+ .+.++++.+++++++...+..+........+..+.|.++++.+|++..+.+++.....++.+++..+.
T Consensus 195 -~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 263 (394)
T PRK11652 195 -R----------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFA 263 (394)
T ss_pred -H----------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01123567888888776666666555666667788899999899999999998888888899999999
Q ss_pred hhhcCCCcccchhhHhh-HHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHH
Q psy13668 218 TILSGPRLTSPFDFSAS-VGPGLGILAASYSG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIG 295 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~-~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~ 295 (513)
+++.||.+++....... ....+......... .+.+.......+.....+...+.......+..|+++|++.++.+...
T Consensus 264 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 343 (394)
T PRK11652 264 GRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQ 343 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence 99999987433222111 12222222222211 22222222222222334455666677777778889999999999999
Q ss_pred hHHhhHHHHHHHHhcc
Q psy13668 296 ALSGTVSPYLVGVLTP 311 (513)
Q Consensus 296 ~i~~~igp~l~g~l~~ 311 (513)
.+++.+++.+.+.+.+
T Consensus 344 ~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 344 NIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHccC
Confidence 9999999998877654
No 47
>PRK10504 putative transporter; Provisional
Probab=99.67 E-value=3.3e-14 Score=148.60 Aligned_cols=277 Identities=16% Similarity=0.139 Sum_probs=176.5
Q ss_pred chhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhh--------
Q psy13668 7 NNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQ-------- 76 (513)
Q Consensus 7 ~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~-------- 76 (513)
...++.+++| +|++..++...+..+|..++++++|.+.|.. |||+.|++..++..+............+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~ 197 (471)
T PRK10504 119 GRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDL 197 (471)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCh
Confidence 3456778885 4567788888899999999999999999998 9999999877655544433333222211
Q ss_pred hHHH--HHHHHH---HHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCC
Q psy13668 77 IGNV--VSMAVS---GLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPP 151 (513)
Q Consensus 77 ~g~~--~~~~~~---~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (513)
.+.. ...... +.-.....+|.... +.............+..+++..+++..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 253 (471)
T PRK10504 198 SGFLLLAVGMATLTLALDGSKGLGLSPLA-IAGLVAVGVVALLLYLLHARNNNRALF----------------------- 253 (471)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCCcchHH-HHHHHHHHHHHHHHHHHHHhcCCCCcc-----------------------
Confidence 1110 000000 00011111453222 222222222222222222211111111
Q ss_pred CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668 152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDF 231 (513)
Q Consensus 152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 231 (513)
+ .++++|+++.......++..........+.|.|++..+|.++.+.++...+..++..++.++.+++.||+++|+...
T Consensus 254 -~-~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~ 331 (471)
T PRK10504 254 -S-LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLV 331 (471)
T ss_pred -C-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence 1 35788999988888888777777677778999999888999999999999989999999999999999999999988
Q ss_pred HhhHHHHHHHHHHHhcCC-hhHHHH--HHHHHHHHHHhhhhhhHHHhhc-ccCcchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 232 SASVGPGLGILAASYSGC-NRLAVT--VSFTLGMGTMGAFLPSLKVNAL-DLSPNYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
.+..+.++...++...+. ...... ..+..+. ..+...+....... ..+++++|.+.|+.++...++..+|+.+.|
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g 410 (471)
T PRK10504 332 ATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGM-VNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAG 410 (471)
T ss_pred HHHHHHHHHHHHHHhccccccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 887777766555554432 222211 1222222 23333333334443 444677999999999999999999999998
Q ss_pred Hhcc
Q psy13668 308 VLTP 311 (513)
Q Consensus 308 ~l~~ 311 (513)
.+++
T Consensus 411 ~ll~ 414 (471)
T PRK10504 411 LLLG 414 (471)
T ss_pred HHHH
Confidence 8876
No 48
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.66 E-value=1.7e-14 Score=148.43 Aligned_cols=277 Identities=10% Similarity=0.053 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHH-HHHHH----H----------HHHHHHH--------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGA-VGLAW----F----------ALWMTFA-------------- 72 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~-~~~~~----~----------~~~~~~~-------------- 72 (513)
.|+..+...++..+++++.|+++||+ |.|.++..... ..+.. . ..+....
T Consensus 48 ~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (420)
T PRK09528 48 TGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAG 126 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchh
Confidence 78889999999999999999999999 88877653211 11000 0 0000000
Q ss_pred ----------h-----------hhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668 73 ----------T-----------GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131 (513)
Q Consensus 73 ----------~-----------~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 131 (513)
. ...+|..+++++++.+.+ . +|+.+|++.++++++..++.++..++++++.. .
T Consensus 127 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 200 (420)
T PRK09528 127 AIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-I-NPQINFWLGSGSALILLVLLFFAKPDAPSTAK-V--- 200 (420)
T ss_pred hhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-c-CchHhHHHHHHHHHHHHHHHhcccccccchhh-h---
Confidence 0 012467788888887765 4 89999998777776665555444443322211 0
Q ss_pred cccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc---CcchhhhhHHhchhHH
Q psy13668 132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL---HFSITSVDLISGWPNR 208 (513)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~---g~s~~~~~~~~~~~~~ 208 (513)
.+++.+ +..+.+....++.+|+++++...+..++....+.....+.|.|+.+.+ +.+..+.+.+.+...+
T Consensus 201 ----~~~~~~---~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 273 (420)
T PRK09528 201 ----ANALGA---NASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVF 273 (420)
T ss_pred ----ccchhc---ccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Confidence 000000 000011122356788888876666555555555556667888887654 4566677888888888
Q ss_pred HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHH
Q psy13668 209 SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTL 287 (513)
Q Consensus 209 ~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~ 287 (513)
...++.+..|++.||+++|+....+.++..+...++.+.++...........+. ..+...........+.. ++.+++.
T Consensus 274 ~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~a~~ 352 (420)
T PRK09528 274 LEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAF-EVPFLLVGVFKYITLNFDVRLSATI 352 (420)
T ss_pred HHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCccceeee
Confidence 999999999999999999999888777777776666655443322222222222 22222233334444444 5667777
Q ss_pred HHH-HHHHHhHHhhHHHHHHHHhccch
Q psy13668 288 MAL-VGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 288 ~gi-~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
.++ .+....+|.+++|.+.|.+.|..
T Consensus 353 ~~~~~~~~~~lg~~ig~~~~G~l~~~~ 379 (420)
T PRK09528 353 YLVGFQFAKQLGAVFLSTLAGNLYDSI 379 (420)
T ss_pred eeehHHHHHHHHHHHHHHHHHHHHHhh
Confidence 665 67788999999999999988743
No 49
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.66 E-value=9.9e-14 Score=140.93 Aligned_cols=273 Identities=9% Similarity=0.058 Sum_probs=178.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccCch----HHHHHHHHH-HHHHHH----HHHHHH------------------
Q psy13668 20 SNTVILMAGAQIGNVVSMAVSGLLIRYLGGWT----SVFYVFGAV-GLAWFA----LWMTFA------------------ 72 (513)
Q Consensus 20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr----~if~~~g~~-~~~~~~----~~~~~~------------------ 72 (513)
...|+..+...++..++.++.|.+.||. |.+ ....+...+ ...... .|.+..
T Consensus 39 ~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a 117 (382)
T PRK11128 39 ETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDA 117 (382)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHcccccHHHH
Confidence 3377888889999999999999999999 752 222111111 100000 011000
Q ss_pred -----------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccc
Q psy13668 73 -----------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAV 135 (513)
Q Consensus 73 -----------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 135 (513)
....+|..++|++++.+.+++ |||..|++.++..++.. +..+..||. .|..
T Consensus 118 ~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~~f~~~~~~~~~~~-~~~~~~~~~---~~~~------- 185 (382)
T PRK11128 118 LANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQAILWILTAGVASML-LGQLLRPTI---MPQG------- 185 (382)
T ss_pred HHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhHHHHHHHHHHHHHH-HHHHccCCC---CCcc-------
Confidence 001367889999999999988 99999987665444333 222233322 1111
Q ss_pred cccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHH
Q psy13668 136 MHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYK 215 (513)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~ 215 (513)
++ ++ +.++...++++++|+++++...+..++.........++.|.|++| .|++..+.+.+.....+...+..+
T Consensus 186 ~~-~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~ 258 (382)
T PRK11128 186 ES-RQ-----QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFA 258 (382)
T ss_pred cc-cc-----ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHH
Confidence 10 00 000112346789999999988887777777777788888999976 799999999998888889999999
Q ss_pred hhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH-H
Q psy13668 216 MRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG-I 294 (513)
Q Consensus 216 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~-~ 294 (513)
..|++.||+++|+....+.+..+++.+.+...++........+..+.+ .+...+.......+..++++++..+..+. .
T Consensus 259 ~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (382)
T PRK11128 259 FSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGT-FTVCHLAAMRYIAARPGSEVIRLQALYSALA 337 (382)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCHhhhHHHHHHHHHHH
Confidence 999999999999998888877777766665544333222222222222 33334444455555566778888888774 4
Q ss_pred HhHHhhHHHHHHHHhccch
Q psy13668 295 GALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 295 ~~i~~~igp~l~g~l~~~~ 313 (513)
..++..++|.+.|.+.|..
T Consensus 338 ~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 338 MGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4667789999999888754
No 50
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.65 E-value=1.3e-13 Score=140.52 Aligned_cols=208 Identities=13% Similarity=0.081 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-------HH-------------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-------WM------------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-------~~------------------------- 69 (513)
.+...+...++..++.++.|++.||+ |+|..+.....+..+.... +.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~ 118 (392)
T PRK10473 40 LHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRD 118 (392)
T ss_pred HHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 56777888899999999999999999 8888766432111110000 00
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
.......++..++|.+++.+.+.. +||+.|++.+.+.++..++..+..+|++++++.. ++
T Consensus 119 ~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~ 190 (392)
T PRK10473 119 TLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMAAMGILVLLLSLFILKETRPARAPA-------AS 190 (392)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCC-------cc
Confidence 000000244566777777777777 9999999988877776666555666543221100 00
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
+. ....++.+++++++...+...+.......+..+.|.++++.+|++..+.+.+.....+..+++++..
T Consensus 191 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 259 (392)
T PRK10473 191 SK-----------PRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFST 259 (392)
T ss_pred ch-----------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0112466788887766665555555556667788889988899999999999999999999999999
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHHHHHhcCC
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGILAASYSGC 249 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~ 249 (513)
+++.||+++|+....+.....++...+.....
T Consensus 260 ~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (392)
T PRK10473 260 PFALGIFKPRTLMLTSQVLFLAAGITLALSPS 291 (392)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888877776666665555433
No 51
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.64 E-value=6.8e-14 Score=150.90 Aligned_cols=108 Identities=12% Similarity=0.113 Sum_probs=82.9
Q ss_pred hchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-
Q psy13668 203 SGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP- 281 (513)
Q Consensus 203 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 281 (513)
.....++.++|.++.|+++||+|||+++..+.++.+++++++.+..+........++.+ ++.+...+.......++.|
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g-~~~~~~~~~~~a~~aEl~Pt 679 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFG-GLSIAAWNALDVLTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCH
Confidence 44556788999999999999999999999998888888887776655443333333222 2333445566677788876
Q ss_pred chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 282 NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 282 ~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+.||+++|+.+..+.+|++++|.+.+.+.+
T Consensus 680 ~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 680 DKRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 569999999999999999999999987765
No 52
>PRK10133 L-fucose transporter; Provisional
Probab=99.64 E-value=9.2e-14 Score=143.50 Aligned_cols=156 Identities=10% Similarity=-0.007 Sum_probs=123.2
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHH-HHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668 154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYM-KDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS 232 (513)
Q Consensus 154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l-~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 232 (513)
.++++++|.++...+..++.....++...|.|.|+ ++.+|+++.+.+.......++..+|++.++++.||+++|++...
T Consensus 251 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~ 330 (438)
T PRK10133 251 LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAA 330 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 36788999988877777777788888888999995 66789999999999999999999999999999999999998887
Q ss_pred hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 233 ASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
+.++.++++......+.. .....+.+...+.+..+|.......+..|++.+.+.++.. ...+++.++|.+.|.+.|.
T Consensus 331 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~ 407 (438)
T PRK10133 331 YALIAMALCLISAFAGGH--VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDA 407 (438)
T ss_pred HHHHHHHHHHHHHHcCCh--HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHHh
Confidence 776666555554444332 2233344445567778888888888888888888888886 4567889999999888764
No 53
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.64 E-value=7.6e-14 Score=143.53 Aligned_cols=271 Identities=14% Similarity=0.059 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHH------HHHHHH----------HHHHHH----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVF------GAVGLA----------WFALWM---------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~------g~~~~~----------~~~~~~---------------- 69 (513)
.++..+...++..++.++.|.+.||+ |.|.+.... +.+... +.....
T Consensus 54 ~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~ 132 (417)
T PRK10489 54 VGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALL 132 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68888899999999999999999999 877654321 000000 000000
Q ss_pred -----------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668 70 -----------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG 132 (513)
Q Consensus 70 -----------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 132 (513)
+......+|..+++.+++.+.+.. +||+.|.+.++..++..+.. +..|+.+++++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~----- 205 (417)
T PRK10489 133 AATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAWNYGLAAAGTFITLLPL-LRLPALPPPPQP----- 205 (417)
T ss_pred hhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHH-HhCCCCCCCCcc-----
Confidence 000011256677888888888777 99999987666555444333 344443221110
Q ss_pred ccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668 133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV 212 (513)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i 212 (513)
++++.+. ...+++.+++++.++...+..++. ....+...+.|.|+++.+|++..+.+.+.....++.++
T Consensus 206 ---~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~i 274 (417)
T PRK10489 206 ---REHPLRS-------LLAGFRFLLASPVVGGIALLGGLL-TMASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAAL 274 (417)
T ss_pred ---cccchHH-------HHHHHHHHHcChHHHHHHHHHHHH-HHHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHH
Confidence 0000000 001234567777766555544433 23456778999999998899999999999999999999
Q ss_pred HHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHH
Q psy13668 213 TYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALV 291 (513)
Q Consensus 213 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~ 291 (513)
+.++.+++.||.++++....+..+..++.+.+...++........+..+. ..+...+.......+..| +.||+++|+.
T Consensus 275 g~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 353 (417)
T PRK10489 275 GALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGY-LSAISSLLQYTLLQTQTPDEMLGRINGLW 353 (417)
T ss_pred HHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 99999999999777777666666666665555443322222222222222 223333444566667666 5699999999
Q ss_pred HHHHhHHhhHHHHHHHHhccc
Q psy13668 292 GGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 292 ~~~~~i~~~igp~l~g~l~~~ 312 (513)
+...++++.++|.+.|.+.+.
T Consensus 354 ~~~~~~g~~~g~~l~G~l~~~ 374 (417)
T PRK10489 354 TAQNVTGDAIGAALLGGLGAM 374 (417)
T ss_pred HHHHhhhHhHHHHHHHHHHHH
Confidence 999999999999999988863
No 54
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.64 E-value=4.2e-13 Score=137.70 Aligned_cols=272 Identities=12% Similarity=0.028 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHH------H-----H-----H------------HH----
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAW------F-----A-----L------------WM---- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~------~-----~-----~------------~~---- 69 (513)
.+...+.+.+|.+++.++.|+++||+ |+|.++.....+..+. . + + ..
T Consensus 53 ~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~ 131 (413)
T PRK15403 53 APASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQE 131 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777899999999999999999 9888776422111000 0 0 0 00
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
.......++..++|.+++.+.+.. |||+.|++.+++.++..+..++..||.+++++. +.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~--------~~ 202 (413)
T PRK15403 132 AFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAV--------PF 202 (413)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCCCCccccCC--------CC
Confidence 000011246777888888888777 999999998887776655444455654321110 00
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
+.++. ..+++++++|++++...+..++.....+.+..+.|.++++.+|++..+.++...+...+..+++.+.
T Consensus 203 ~~~~~--------~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~ 274 (413)
T PRK15403 203 SAKSV--------LRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIV 274 (413)
T ss_pred ChHHH--------HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 1134678899999998888888888888888999999999999999999999888888888888887
Q ss_pred hhhcCCCcccchhhHhhHHHHHHHHHHH----hcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHH
Q psy13668 218 TILSGPRLTSPFDFSASVGPGLGILAAS----YSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGG 293 (513)
Q Consensus 218 g~l~dr~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~ 293 (513)
+++.+|..+++..........++..++. ...+..........+.....+...+........-.+..+|++.|+.+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~ 354 (413)
T PRK15403 275 ARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNM 354 (413)
T ss_pred HHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHH
Confidence 7765444333332222221122221111 112222111222222222233333444332222223348999999999
Q ss_pred HHhHHhhHHHHHHHHhcc
Q psy13668 294 IGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 294 ~~~i~~~igp~l~g~l~~ 311 (513)
........++.+.+++.+
T Consensus 355 ~~~~~~~~~~~~~g~~~~ 372 (413)
T PRK15403 355 VILMVMAVSVEIGRWLWF 372 (413)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999998888888877654
No 55
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.63 E-value=5.3e-14 Score=162.73 Aligned_cols=276 Identities=13% Similarity=0.044 Sum_probs=180.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH---HHHHHHH------H-HHHHH--------------------
Q psy13668 20 SNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV---FGAVGLA------W-FALWM-------------------- 69 (513)
Q Consensus 20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~---~g~~~~~------~-~~~~~-------------------- 69 (513)
...++..+.+.++.++..+++|+++||+ |.|.+... ...+.+. . ...+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHH
Confidence 3467788889999999999999999999 98876421 1110000 0 00000
Q ss_pred -----------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccc
Q psy13668 70 -----------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYG 132 (513)
Q Consensus 70 -----------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 132 (513)
+......+|.+++|++++++.... +|++.|....++.++.. +..+.+++.+.+.+..
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---- 204 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG-NFVILVALLMGIAVLGW-LASLFIPKTGNAAPDL---- 204 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHH-HHHhhCCCCCCCCCCC----
Confidence 111112477889999999999887 99999844444444333 3333444433221111
Q ss_pred ccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHH
Q psy13668 133 TAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIV 212 (513)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~i 212 (513)
+.+. ....+ ....++.+.+++.++...+..++.......+.+++|.|+++.+|.+..+.+++.+...++.++
T Consensus 205 ---~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~i 276 (1140)
T PRK06814 205 ---KIDR-NIIRS----TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAV 276 (1140)
T ss_pred ---eecc-chHHH----HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 1000 00000 011346677889999988888888888888889999999999999999999999999999999
Q ss_pred HHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc-------------------CChhHHH-HHHHHHHHHHHhhhhhhH
Q psy13668 213 TYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS-------------------GCNRLAV-TVSFTLGMGTMGAFLPSL 272 (513)
Q Consensus 213 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~-------------------~~~~~~~-~~~~~~~~~~~~~~~~~~ 272 (513)
|.+..|+++||..+++....+.++.+++.+.+... ..+.+.. +..+.+++ +.+...+..
T Consensus 277 g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~ 355 (1140)
T PRK06814 277 GSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAA-AGGLYIVPL 355 (1140)
T ss_pred HHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHH-HHHHhHHHH
Confidence 99999999998877665555554444443333221 0222222 22233333 334444445
Q ss_pred HHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 273 KVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 273 ~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.+..++.. ++++|++.|+.++..+++..+++.+.|.+.+
T Consensus 356 ~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 356 FAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55655555 5679999999999999999999999988864
No 56
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.63 E-value=1.5e-13 Score=140.23 Aligned_cols=192 Identities=8% Similarity=-0.087 Sum_probs=130.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668 95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD 174 (513)
Q Consensus 95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 174 (513)
+||.++++..++.++..++.+++.++.|+++... ....+.+|+++.|..++.+++.+
T Consensus 209 ~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~~~-----------------------~~~~~vlk~~~~Wllslly~~tF 265 (462)
T PRK15034 209 SLANAAWIWVPLLAIATIAAWSGMNDIASSRASI-----------------------ADQLPVLQRLHLWLLSLLYLATF 265 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCH-----------------------HHHHHHhCCCchhHHHHHHHHHH
Confidence 4788777777777666656565555433221111 01267899999999999999999
Q ss_pred HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHH-hcCC----
Q psy13668 175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAAS-YSGC---- 249 (513)
Q Consensus 175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~-~~~~---- 249 (513)
..+.++..++|.|+++.+ +............+...+.++++|+++||+|++++...+.+...++...+. ..+.
T Consensus 266 G~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~ 343 (462)
T PRK15034 266 GSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSG 343 (462)
T ss_pred HHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999999999998855 333333334445678889999999999999999998888876666653322 2221
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc----------------------hhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 250 NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN----------------------YAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----------------------~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
+.......+...+...+...........+++|+ +.|.+.|+....+.+|+.+.|.+.|
T Consensus 344 ~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g 423 (462)
T PRK15034 344 NFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFG 423 (462)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHH
Confidence 122222223222334444554555444444442 6899999999999999999999988
Q ss_pred Hhcc
Q psy13668 308 VLTP 311 (513)
Q Consensus 308 ~l~~ 311 (513)
...+
T Consensus 424 ~~~~ 427 (462)
T PRK15034 424 MSLN 427 (462)
T ss_pred HHHH
Confidence 7765
No 57
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.62 E-value=2.6e-13 Score=139.00 Aligned_cols=270 Identities=14% Similarity=0.136 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-------HH---------H----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-------LW---------M---------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-------~~---------~---------------- 69 (513)
.+...+...++..++.++.|++.||+ |.|.++.....+..+... .+ .
T Consensus 56 ~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 134 (408)
T PRK09874 56 SGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQ 134 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHh
Confidence 46778888899999999999999999 887776642211110000 00 0
Q ss_pred -----------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccc
Q psy13668 70 -----------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHK 138 (513)
Q Consensus 70 -----------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 138 (513)
.......+|..+++.+++.+.+.. +||+.|.+.+++.++..+...++.++++++.++. +
T Consensus 135 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-- 204 (408)
T PRK09874 135 VPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY-GLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK-------E-- 204 (408)
T ss_pred cCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-------h--
Confidence 000001245677788888887777 9999999888877766665555666543211110 0
Q ss_pred chhhhhccCCCCCCchhhhccchhHHHHHH-HHHHHHHHHHHHHhhHHHHHHHhcCcchh---hhhHHhchhHHHHHHHH
Q psy13668 139 SNRFIFSFQNLPPTPWGKIATSAPVIGLII-AQIGHDFGLFTIVTDLPKYMKDVLHFSIT---SVDLISGWPNRSVIVTY 214 (513)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l-~~~~~~~~~~~~~~~lp~~l~~~~g~s~~---~~~~~~~~~~~~~~ig~ 214 (513)
+.+. + +..+.+++++++.... ..+...........+.|.|..+..+.... ..+.+.....++..++.
T Consensus 205 ~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~ 275 (408)
T PRK09874 205 MLHM-R--------EVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSA 275 (408)
T ss_pred hhHH-H--------HHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 1134566666654332 23333344445567788888876443222 24555666778888999
Q ss_pred HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHH
Q psy13668 215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGG 293 (513)
Q Consensus 215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~ 293 (513)
+..|+++||++||+....+.....++.+.+...++.....+..+..+. +.+...+.......+.. ++++|...++.+.
T Consensus 276 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (408)
T PRK09874 276 PRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGA-ADGALLPAVQTLLVYNSSNQIAGRIFSYNQS 354 (408)
T ss_pred HHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh-hhHhhHHHHHHHHHHhCCcccceeeehHHHH
Confidence 999999999999998887777666665555444433222222222222 33344455555555555 5679999999999
Q ss_pred HHhHHhhHHHHHHHHhccc
Q psy13668 294 IGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 294 ~~~i~~~igp~l~g~l~~~ 312 (513)
...++..++|.+.|.+.+.
T Consensus 355 ~~~~g~~~gp~~~G~l~~~ 373 (408)
T PRK09874 355 FRDIGNVTGPLMGAAISAN 373 (408)
T ss_pred HHHHHHHhhHHHHHHHHhh
Confidence 9999999999999988764
No 58
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.62 E-value=1.8e-13 Score=139.71 Aligned_cols=277 Identities=10% Similarity=0.055 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHH-HHH--HHH-H----------H-HHHHHHH--------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVF-GAV--GLA-W----------F-ALWMTFA-------------- 72 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~-g~~--~~~-~----------~-~~~~~~~-------------- 72 (513)
.++..+...++..++.++.|+++||+ |.|..+... ... +.. . . ..+....
T Consensus 40 ~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 118 (396)
T TIGR00882 40 TGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAG 118 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 67888999999999999999999999 877776431 110 000 0 0 0000000
Q ss_pred ------hh---------------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668 73 ------TG---------------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131 (513)
Q Consensus 73 ------~~---------------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 131 (513)
.+ ..+|.++++.+++.+. .. +||.+|++.+.+.++..++.+...+++|++++..
T Consensus 119 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~-~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 193 (396)
T TIGR00882 119 AIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILF-SI-DPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA--- 193 (396)
T ss_pred hHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhh-cc-CchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh---
Confidence 00 0256677788877664 45 9999999888877776655554444433221100
Q ss_pred cccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc---CcchhhhhHHhchhHH
Q psy13668 132 GTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL---HFSITSVDLISGWPNR 208 (513)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~---g~s~~~~~~~~~~~~~ 208 (513)
+..+ .+.++.+..+.++++|+++++...+..++....+.....+.|.|+++.+ +.+....+.+.+...+
T Consensus 194 ----~~~~----~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i 265 (396)
T TIGR00882 194 ----NALG----ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGEL 265 (396)
T ss_pred ----cccc----cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHH
Confidence 0000 0011111234577889999887777666666666667778899988875 4555667888888888
Q ss_pred HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHH
Q psy13668 209 SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTL 287 (513)
Q Consensus 209 ~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~ 287 (513)
...++.+..+++.||+++|+....+..+.++........++........+..+.+ .............+.. ++.+++.
T Consensus 266 ~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~at~ 344 (396)
T TIGR00882 266 LNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFE-VPFLLVGCFKYITSQFDVRLSATI 344 (396)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCcceEEEe
Confidence 8899999999999999999998887777776665555444333332222222221 2222222233334433 4456666
Q ss_pred HHH-HHHHHhHHhhHHHHHHHHhccch
Q psy13668 288 MAL-VGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 288 ~gi-~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
.+. .+....+++.++|.+.|.+.|..
T Consensus 345 ~~~~~~~~~~lg~~~~~~l~G~l~~~~ 371 (396)
T TIGR00882 345 YLIGFQFAKQLAMIFLSTLAGNMYDSI 371 (396)
T ss_pred ehHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence 655 56789999999999999998743
No 59
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.62 E-value=8.6e-14 Score=141.24 Aligned_cols=161 Identities=18% Similarity=0.069 Sum_probs=112.8
Q ss_pred chhhhccchh--HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchh
Q psy13668 153 PWGKIATSAP--VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD 230 (513)
Q Consensus 153 ~~~~~l~~~~--~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 230 (513)
+.++.+++++ ++......++.....+....++|.|+++.+|.+..+.+.......+...+++++.|+++||++||+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 288 (394)
T TIGR00883 209 PIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL 288 (394)
T ss_pred CHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 3456666655 77777777777778888889999999888999999999999999999999999999999999999876
Q ss_pred hHhhHHHHHHH-HHH-HhcC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHH-HHHhHHhhHHHHH
Q psy13668 231 FSASVGPGLGI-LAA-SYSG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVG-GIGALSGTVSPYL 305 (513)
Q Consensus 231 ~~~~~~~~~~~-~~l-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~-~~~~i~~~igp~l 305 (513)
.....+..+.. ..+ .... .+.........+.....+...+.......|..| ++|+++.++.+ ....+++.++|.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~ 368 (394)
T TIGR00883 289 IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYI 368 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHH
Confidence 65444333222 222 2222 222222222222233344455556677777776 56999999854 4556788899999
Q ss_pred HHHhccch
Q psy13668 306 VGVLTPNW 313 (513)
Q Consensus 306 ~g~l~~~~ 313 (513)
.|.+.+..
T Consensus 369 ~g~l~~~~ 376 (394)
T TIGR00883 369 AAALVAMT 376 (394)
T ss_pred HHHHHHHc
Confidence 99888743
No 60
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.62 E-value=7.4e-14 Score=137.24 Aligned_cols=258 Identities=10% Similarity=-0.009 Sum_probs=174.3
Q ss_pred eechhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy13668 5 VINNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVS 82 (513)
Q Consensus 5 ~~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 82 (513)
...|..+++..+ ++.+.+++..+.+.+|..++|.+++.+..+. .-. .. ...+.
T Consensus 29 ~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~-~~~-~~--------------------~~~~~--- 83 (310)
T TIGR01272 29 VAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSG-AGD-LS--------------------MQVAT--- 83 (310)
T ss_pred hhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC-Ccc-hh--------------------hhhhh---
Confidence 345677777763 4556689999999999999999999887542 100 00 00000
Q ss_pred HHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchh
Q psy13668 83 MAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAP 162 (513)
Q Consensus 83 ~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 162 (513)
.-.+.. .||++|++.+.+..+..+.+.+. +.|+.++.. ++++.+ + +....++.++++.
T Consensus 84 -----~~~~~~-~~~~~yl~ia~~~~~~~i~~~~~--~~p~~~~~~-------~~~~~~----~---~~~~~~~~~~~~~ 141 (310)
T TIGR01272 84 -----ANAEAA-KVHTPYLLLAGALAVLAIIFAFL--PLPELQEAD-------VARVSS----G---DTTQKTSAFQFTH 141 (310)
T ss_pred -----hhHHHH-HHHHHHHHHHHHHHHHHHHHHHc--cCCCCCccc-------cccccc----c---cccchhhHHhhHH
Confidence 001112 79999987776665555433322 222221111 100000 0 0001145677888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHh--cCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDV--LHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
++...+..+++.....+...|.+.|+.|. +|+++.+.+...+....+..+|+++.+++.||+++|+....+..+..++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 88888888888888999999999999865 6899999999999999999999999999999999988887777766666
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.++....+... ....+.+...+.+..+|.......+..|++.+++.++. ..+.+|+++.|.+.|.+.|.
T Consensus 222 ~~l~~~~~~~~--~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 222 SIGAALTHGYV--AMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence 65554443322 12222233355667777777777777777788888875 67889999999999988874
No 61
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.61 E-value=4.8e-14 Score=145.86 Aligned_cols=201 Identities=13% Similarity=0.047 Sum_probs=136.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668 95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD 174 (513)
Q Consensus 95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 174 (513)
+||+.+.+.++++++..++..+..+|++++.+.. ++++ ......+++++++|+++...+..++..
T Consensus 171 g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~-------~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (437)
T TIGR00792 171 GWFMFALVLALIGVVSLIICFFGTKERYSEIPKN-------IEKK--------LSLKQIFKALFKNDQLLILCLAYLFYN 235 (437)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc-------cccC--------CCHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 8999999988888877766665666654221110 0000 000123467788999998888888777
Q ss_pred HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHH
Q psy13668 175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAV 254 (513)
Q Consensus 175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 254 (513)
...+....+.+.|.++.++ +..+.+.+.....++.+++.++.++++||+++|+....+.++.+++.+.+...+.+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (437)
T TIGR00792 236 LAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLI 314 (437)
T ss_pred HHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHH
Confidence 7777766666666666555 455666677777899999999999999999999998888777777666655544333333
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhcccC--------cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 255 TVSFTLGMGTMGAFLPSLKVNALDLS--------PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.....+.....+...+...+...|.. ++.+|...|+.++...+++.+++.+.|.+.+
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 315 LVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33323322333344444445544442 3558999999999999999999999988875
No 62
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.61 E-value=1.3e-13 Score=145.25 Aligned_cols=286 Identities=11% Similarity=0.074 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------------HHHHHHHhh----------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF-----------------ALWMTFATG---------- 74 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~-----------------~~~~~~~~~---------- 74 (513)
.+...+...+|.+++.++.|++.|++ |+|.++.....+..+.. +....+..+
T Consensus 58 ~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 136 (502)
T TIGR00887 58 SAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLS 136 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHH
Confidence 56788889999999999999999999 99988754221111100 000000000
Q ss_pred -----------------------hhhHHHHHHHHHHHHHh-----------------------ccCCchHHHHHHHHHHH
Q psy13668 75 -----------------------AQIGNVVSMAVSGLLIR-----------------------YLGGWTSVFYVFGAVGL 108 (513)
Q Consensus 75 -----------------------~~~g~~~~~~~~~~l~~-----------------------~~~gWr~~f~i~~~~~~ 108 (513)
..+|..+++.+...+.. .+ +||++|.+.+++++
T Consensus 137 ~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~WR~~~~~~~ip~~ 215 (502)
T TIGR00887 137 AIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDY-MWRILIGFGAVPAL 215 (502)
T ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcc-cHHHHHHHHHHHHH
Confidence 01344445554443321 23 79999977666665
Q ss_pred HHHHHHHHhccCCCCCc---cchhc--------ccccccccchhhhh---ccCCCCCCchhhhccc---hhH----HHHH
Q psy13668 109 AWFALWMTFASSDPSES---THYVA--------YGTAVMHKSNRFIF---SFQNLPPTPWGKIATS---APV----IGLI 167 (513)
Q Consensus 109 ~~~~~~~~~~~~~p~~~---~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~---~~~----~~~~ 167 (513)
+.. ++.+++||+|... .+.++ ..+...+++.+..+ +.++..+.++++++++ ++. +...
T Consensus 216 i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 294 (502)
T TIGR00887 216 LAL-YFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTA 294 (502)
T ss_pred HHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHH
Confidence 443 4455678877521 11000 00000000000000 0000111245666642 222 2222
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhH------------HhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668 168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDL------------ISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV 235 (513)
Q Consensus 168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 235 (513)
...++....+|+...|.|.++++ .|++..+.+. ......++.+++.++.+++.||+|||+....+..
T Consensus 295 ~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~ 373 (502)
T TIGR00887 295 GSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHH
Confidence 33344455677888899999975 5876543221 1233445667788999999999999999888777
Q ss_pred HHHHHHHHHHhcCC--hhHHHHHHHHHHH-HHHhhhhhhHHHhhcccCcc-hhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 236 GPGLGILAASYSGC--NRLAVTVSFTLGM-GTMGAFLPSLKVNALDLSPN-YAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 236 ~~~~~~~~l~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~-~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+.++++.++..... ........+.+.. .......+.......|++|. .|+++.|+.+..+.++++++|.+.+.+.+
T Consensus 374 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 374 ILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence 66666554443211 1111111111111 11222334455666788874 59999999999999999999999988876
No 63
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.61 E-value=1.8e-13 Score=158.61 Aligned_cols=280 Identities=13% Similarity=0.072 Sum_probs=179.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHH------HH--------HHHH---------------
Q psy13668 19 QSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLA------WF--------ALWM--------------- 69 (513)
Q Consensus 19 ~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~------~~--------~~~~--------------- 69 (513)
....++..+.+.++.+++.++.|+++||+ |.|.++.....+.++ +. ++..
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 34467888899999999999999999999 988877643211111 00 0000
Q ss_pred ------------------HHHhhhhhHHHHHHHHHHHHHhc--------cCCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q psy13668 70 ------------------TFATGAQIGNVVSMAVSGLLIRY--------LGGWTSVFYVFGAVGLAWFALWMTFASSDPS 123 (513)
Q Consensus 70 ------------------~~~~~~~~g~~~~~~~~~~l~~~--------~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~ 123 (513)
+......+|.++++.+++.+... ..+|++.+.+..+...++.++..+..++.|+
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 00001136677888888887765 3245555544444433333333444555443
Q ss_pred CccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchh-hhhHH
Q psy13668 124 ESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSIT-SVDLI 202 (513)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~-~~~~~ 202 (513)
..+.. .+++... ..+.....++.+++++.++...+..++.....+.+..++|.|+++.+|++.. +.+++
T Consensus 205 ~~~~~-------~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~ 274 (1146)
T PRK08633 205 AAPEV-------FDKKKYL---FPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYL 274 (1146)
T ss_pred CCccc-------ccccccc---cHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHH
Confidence 32211 0000000 0000012345677888888877777777777778888999999999999998 99999
Q ss_pred hchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-c
Q psy13668 203 SGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-P 281 (513)
Q Consensus 203 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p 281 (513)
.+...++.+++.++.|+++||.++++....+.++.+++++.+....+.....+..+..++ +.+...+.......+.. +
T Consensus 275 ~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~ 353 (1146)
T PRK08633 275 LAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF-SAGLFIVPLNALIQFRAPE 353 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHhhHHHHHHHhhcCCc
Confidence 999999999999999999999999888877777777766666555432222222233332 23334444555555665 5
Q ss_pred chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 282 NYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 282 ~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
+.+|++.|+.+++.+++..+++.+.+.+.
T Consensus 354 ~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 354 KELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999887777665543
No 64
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.60 E-value=1e-13 Score=145.28 Aligned_cols=161 Identities=12% Similarity=0.043 Sum_probs=110.7
Q ss_pred chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhc-hhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668 153 PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISG-WPNRSVIVTYKMRTILSGPRLTSPFDF 231 (513)
Q Consensus 153 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~-~~~~~~~ig~~~~g~l~dr~~~~~~~~ 231 (513)
++++++++++.|...+..++.....+....|.+.|+.+.+|+|..+.+.+.. ...++.++|.+++|+++||+++|+...
T Consensus 214 ~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~ 293 (491)
T PRK11010 214 PLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALM 293 (491)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 3466777777776666666666666677788999988888999999999874 566899999999999999999888766
Q ss_pred HhhHHHHHHHHH---HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 232 SASVGPGLGILA---ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 232 ~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
.+.++.++..+. +.....+.........+.....+...+.......+..+ +.+++..|+.+...+++..+++.+.|
T Consensus 294 i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G 373 (491)
T PRK11010 294 IFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAG 373 (491)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555443433222 22222222222222222222233334445566666665 45899999999999999999988999
Q ss_pred Hhccch
Q psy13668 308 VLTPNW 313 (513)
Q Consensus 308 ~l~~~~ 313 (513)
.+.|..
T Consensus 374 ~l~~~~ 379 (491)
T PRK11010 374 WFVEAH 379 (491)
T ss_pred HHHHHh
Confidence 888743
No 65
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.59 E-value=1.5e-13 Score=131.32 Aligned_cols=194 Identities=15% Similarity=0.210 Sum_probs=144.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668 95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD 174 (513)
Q Consensus 95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 174 (513)
|||....+.+.++++.++.|+.-. +++. ++.. .. + ..+-..++|+|.-|...+.+.+.+
T Consensus 163 gW~~aL~~WAl~allAl~~WlPq~-~r~~-~~~~-------~~---~---------~~~~~~vw~~~~aW~vtLfmGlqS 221 (395)
T COG2807 163 GWRGALGFWALLALLALLIWLPQA-LREQ-AASI-------AT---K---------LVSVRKVWRSPLAWQVTLFMGLQS 221 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhc-cccc-cccc-------cc---c---------cccccccccCchhHHHHHHHHhhH
Confidence 799988888888888777666442 1110 1111 00 0 001156899999999999999999
Q ss_pred HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-cccchhhHhhHHHHHHHHHHHhcCChhHH
Q psy13668 175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-LTSPFDFSASVGPGLGILAASYSGCNRLA 253 (513)
Q Consensus 175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 253 (513)
..+|..+.|+|.++.|. |+|..++|.+.+...+.+++.++..-.+.+|. ++|+.......++.++..-+.+.+.+...
T Consensus 222 ~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~ 300 (395)
T COG2807 222 LLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPI 300 (395)
T ss_pred HHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 99999999999999985 99999999999999999999999999999974 56777777777777777777676665543
Q ss_pred HHHHHHHHHHHHhhhhhhH--HHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 254 VTVSFTLGMGTMGAFLPSL--KVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.. .+.++.+. +..++.. ......-.|++.+.-+|+.+.++++-.+.||.+.|++-|.
T Consensus 301 lw-~~llG~G~-G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa 359 (395)
T COG2807 301 LW-ALLLGLGQ-GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDA 359 (395)
T ss_pred HH-HHHHhCcc-chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHh
Confidence 33 23333332 3333333 3333334478899999999999999999999999988874
No 66
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.59 E-value=1e-12 Score=133.41 Aligned_cols=262 Identities=13% Similarity=0.048 Sum_probs=158.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH------HHH-----HHHH--------------------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL------AWF-----ALWM-------------------- 69 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~------~~~-----~~~~-------------------- 69 (513)
..|+..+...+|..++.++.|++.||+ |.|.++.....+.. .+. ....
T Consensus 42 ~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~ 120 (381)
T PRK03633 42 QVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALM 120 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378899999999999999999999999 88887664221111 000 0000
Q ss_pred -------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668 70 -------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM 136 (513)
Q Consensus 70 -------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 136 (513)
.......+|..+++.+++.+.+.. .|+..+. .+........ .++.+.+|++. +
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~----------~ 186 (381)
T PRK03633 121 CSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL-MSVLPWV-TGLVLAAILP--LLFTRILNQQA----------E 186 (381)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-cchHHHH-HHHHHHHHHH--HHHhcccCCCC----------C
Confidence 000001245566666666655443 3333332 2222211111 11222211110 1
Q ss_pred ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHh
Q psy13668 137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKM 216 (513)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~ 216 (513)
+ + ++.+.++.++++.++......+..........+++|.|+++ .|.+..+.+.+.....++..++++.
T Consensus 187 ~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~ 254 (381)
T PRK03633 187 N-H----------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWP 254 (381)
T ss_pred C-C----------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 0 01123566778777765544444444555666789999987 5999999999888999999999999
Q ss_pred hhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHH
Q psy13668 217 RTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIG 295 (513)
Q Consensus 217 ~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~ 295 (513)
.|++.||+++|+....+.....++..... . ...........+.+ .....+.......+.. +++++...+..+...
T Consensus 255 ~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (381)
T PRK03633 255 IGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAA-GFTLYPVAMAWACEKVEHHELVAMNQALLLSY 330 (381)
T ss_pred hHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHH-HHhHHHHHHHHHHccCCHHHHHHHHHHHHHHH
Confidence 99999999999888777666666554433 1 11111112222222 2233455555555555 456788888888889
Q ss_pred hHHhhHHHHHHHHhccch
Q psy13668 296 ALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 296 ~i~~~igp~l~g~l~~~~ 313 (513)
++|+.++|.+.|.+.|..
T Consensus 331 ~lG~~igp~~~G~l~~~~ 348 (381)
T PRK03633 331 TVGSLLGPSFTAMLMQNY 348 (381)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988754
No 67
>PRK15075 citrate-proton symporter; Provisional
Probab=99.58 E-value=1.8e-13 Score=141.47 Aligned_cols=248 Identities=15% Similarity=0.145 Sum_probs=147.9
Q ss_pred hhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q psy13668 8 NVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAV 85 (513)
Q Consensus 8 ~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (513)
...++||+| +|++..++...+.++|..+++.+++.+.... .
T Consensus 139 ~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~-~------------------------------------ 181 (434)
T PRK15075 139 SVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWL-S------------------------------------ 181 (434)
T ss_pred HHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C------------------------------------
Confidence 456888884 6777888888888888888888887775433 1
Q ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHH
Q psy13668 86 SGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIG 165 (513)
Q Consensus 86 ~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 165 (513)
....+.. |||++|++....... . ++.++++++.+.. .++++ +.+.+..+++..++++.+.
T Consensus 182 -~~~~~~~-gWr~~f~~~~~~~~~----~-~~~~~~~~e~~~~-------~~~~~------~~~~~~~~~~~~~~~~~~~ 241 (434)
T PRK15075 182 -PAQMAEW-GWRIPFLIGCLIVPF----I-FLIRRSLEETEEF-------LARKH------RPSMREIFRSLAANWRIVL 241 (434)
T ss_pred -HHHHhcc-chHHHHHHHHHHHHH----H-HHHHHhcCCCHHH-------HHhhh------ccccccHHHHHHHhHHHHH
Confidence 1112334 888888763322211 1 1223322222111 10000 0000111233345555443
Q ss_pred H-HHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH-H
Q psy13668 166 L-IIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL-A 243 (513)
Q Consensus 166 ~-~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~-~ 243 (513)
. ....+.....++....|.|.|+++.+|++..+.++...+..+++.++++..|+++||++||+....+.....+... .
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~ 321 (434)
T PRK15075 242 AGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPA 321 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 3 3334445566778889999999998999999999888889999999999999999999999887665444332221 1
Q ss_pred HH-hcCCh-hHHHHH-HHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHh-HHhhHHHHHHHHhccch
Q psy13668 244 AS-YSGCN-RLAVTV-SFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGA-LSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 244 l~-~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~-i~~~igp~l~g~l~~~~ 313 (513)
+. ..... ...... .+..+. +.+...+.......|..| +.||++.|+.+..+. +++.++|.+.|.+.|..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 322 LSWLVAAPSFARMLAVELWLSF-LYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHcCCchHHHHHHHHHHHH-HHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 11 11222 211111 122222 223333334455566665 569999999765554 46888999999888753
No 68
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.58 E-value=1.8e-13 Score=137.63 Aligned_cols=234 Identities=15% Similarity=0.090 Sum_probs=148.6
Q ss_pred hhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q psy13668 8 NVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAV 85 (513)
Q Consensus 8 ~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (513)
.+++.|++| ||+++.++...+..+|.++++++++.+.+.. |...
T Consensus 105 ~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~-g~~~--------------------------------- 150 (356)
T TIGR00901 105 DAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE-FANT--------------------------------- 150 (356)
T ss_pred HHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc-cccc---------------------------------
Confidence 445667663 4555677777777777777777777776655 2100
Q ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchh---
Q psy13668 86 SGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAP--- 162 (513)
Q Consensus 86 ~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--- 162 (513)
...+ +||..|.+.++..++..+...+..||+ ++.+.. ++++.+. .+.+++++++++.
T Consensus 151 ----~~~~-~wr~~f~i~ai~~l~~~~~~~~~~~e~-~~~~~~-------~~~~~~~-------~~~~~~~~~~~~~~~~ 210 (356)
T TIGR00901 151 ----GLIT-LWGYIFFWTALLILPGLLVTLFLAKEP-QEDASV-------PKPLTQA-------VLKPIREFFQRKNMIQ 210 (356)
T ss_pred ----cccc-ccHHHHHHHHHHHHHHHHHHHHhccCC-Cccccc-------chhHHHH-------HHHHHHHHHHhcCchH
Confidence 0122 699999887776655444333344542 221111 1000000 0112355666664
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH-HHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN-RSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI 241 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 241 (513)
++...+..++.....+....+.|.|+++ +|++..+.+.+..... +..+++.+++|++.||+++|+....+.++.++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~ 289 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTN 289 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 7777777777778888889999999998 8999999988777655 6788999999999999999988877777666655
Q ss_pred HHHHhcC----------ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHh
Q psy13668 242 LAASYSG----------CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGA 296 (513)
Q Consensus 242 ~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~ 296 (513)
..+.+.. .+.+.......+.....+...+.......+..| +++|+..|+.+...+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 290 AGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 5443321 122223333333344456667777777777765 669999999877654
No 69
>TIGR00898 2A0119 cation transport protein.
Probab=99.58 E-value=6.5e-13 Score=140.14 Aligned_cols=289 Identities=12% Similarity=0.032 Sum_probs=168.4
Q ss_pred hhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-----------HHHHHh--
Q psy13668 9 VMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-----------WMTFAT-- 73 (513)
Q Consensus 9 ~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-----------~~~~~~-- 73 (513)
++..||-- ++....++..+...+|.+++.++.|.++||+ |.|.++.+...+..+..+. ...+..
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~ 192 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGM 192 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 44445541 3455578889999999999999999999999 9888877533222111100 000000
Q ss_pred -------------------------------hhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q psy13668 74 -------------------------------GAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDP 122 (513)
Q Consensus 74 -------------------------------~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p 122 (513)
...+|.++++.++..+ .+||+.|++.+++.++..+.. ++++|+|
T Consensus 193 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~~wr~~~~~~~i~~~~~~~~~-~~~~esp 267 (505)
T TIGR00898 193 GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI----PDWRWLQLAVSLPTFLFFLLS-WFVPESP 267 (505)
T ss_pred hccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHH-HhcCCCh
Confidence 0113333344433322 259999999888877666555 5667766
Q ss_pred CCc---cchhc-----------ccccccccchhh--hhc-cCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHH
Q psy13668 123 SES---THYVA-----------YGTAVMHKSNRF--IFS-FQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLP 185 (513)
Q Consensus 123 ~~~---~~~~~-----------~~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp 185 (513)
+.. .+.++ ++....++..+. .++ ..+.++.++++++++++++...+...+...........++
T Consensus 268 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (505)
T TIGR00898 268 RWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLV 347 (505)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 321 00000 000000000000 000 0011124667888888877665554433222222111222
Q ss_pred HHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh-HHHHHHHHHHHHH
Q psy13668 186 KYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR-LAVTVSFTLGMGT 264 (513)
Q Consensus 186 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~ 264 (513)
.++ +.++.+.. .......+..+++.++.+++.||++||+....+.++.+++++++...+... ........++.++
T Consensus 348 ~~~-~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 348 LDL-GNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFG 423 (505)
T ss_pred ccc-cccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence 222 23344432 233345677788999999999999999999888888888777776665442 3333333333444
Q ss_pred HhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 265 MGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 265 ~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
.....+.......|..| +.|+++.|+.+..+.+|++++|.+.+
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 44555566677778887 45999999999999999999999987
No 70
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.58 E-value=8.3e-13 Score=134.97 Aligned_cols=266 Identities=12% Similarity=-0.011 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH-----------HHH-----H----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF-----------ALW-----M---------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~-----------~~~-----~---------------- 69 (513)
.|+..+...++..+..++.|.++||+ |.|.+......+..... +.. .
T Consensus 48 ~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~ 126 (400)
T PRK11646 48 VGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIK 126 (400)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777888888889999999999 87777653211111000 000 0
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMH 137 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 137 (513)
+......+|..++|.+++.+. .. +||+.|++.++..++..++..+..++.++ ++ .+
T Consensus 127 ~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~---------~~ 194 (400)
T PRK11646 127 LIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-DFRLVCATGAVLFVLAAAFNAWLLPAYKL-ST---------VR 194 (400)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHhCCcccc-cc---------cc
Confidence 000001366788888888887 56 99999998877766655444444443211 00 00
Q ss_pred cchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhh
Q psy13668 138 KSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMR 217 (513)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 217 (513)
++ .+.++++++++++++...+..+...........++|.|+++..+ ++.+.+.+.....+....+....
T Consensus 195 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~ 263 (400)
T PRK11646 195 TP----------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPI 263 (400)
T ss_pred hh----------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHH
Confidence 00 01134677888888766555544444444456789999988755 66777877777766665555444
Q ss_pred hhhc-CCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHH
Q psy13668 218 TILS-GPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIG 295 (513)
Q Consensus 218 g~l~-dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~ 295 (513)
++.. ||.+.++....+....+++...+...++...........+. ..+...+.......+..| +++|++.|+.+...
T Consensus 264 ~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~ 342 (400)
T PRK11646 264 ARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYI-GSIIAEPARETLSASLADARARGSYMGFSRLGL 342 (400)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHccHHHHHHhcCCcccchhhhhHHHHHH
Confidence 5555 45555555556665566665555544433222222222222 233444555666666664 77999999999999
Q ss_pred hHHhhHHHHHHHHhccc
Q psy13668 296 ALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 296 ~i~~~igp~l~g~l~~~ 312 (513)
+++..+||.+.|.+.|.
T Consensus 343 ~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 343 ALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHhcccchHHHHHH
Confidence 99999999999999875
No 71
>PRK10054 putative transporter; Provisional
Probab=99.57 E-value=5.4e-13 Score=136.10 Aligned_cols=269 Identities=12% Similarity=0.063 Sum_probs=168.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH---HH-HH-------HH--H-------H-----------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG---LA-WF-------AL--W-------M----------- 69 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~---~~-~~-------~~--~-------~----------- 69 (513)
..++..+...++.++..++.|.++||+ |.|.+......+. .. .. .+ . .
T Consensus 44 ~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 122 (395)
T PRK10054 44 LIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFA 122 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367778888888999999999999999 7777654321111 00 00 00 0 0
Q ss_pred -------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668 70 -------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM 136 (513)
Q Consensus 70 -------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 136 (513)
+......+|.+++|++++.+.. . +||.+|++.+++.++..+...++.++++.+++ +
T Consensus 123 ~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~-g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~---------~ 191 (395)
T PRK10054 123 DNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q-SINLPFWLAAICSAFPLVFIQIWVQRSEKAIA---------T 191 (395)
T ss_pred HhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCcHHHHHHHHHHHHHHHHHHHHhccccccc---------c
Confidence 0000113667788888887764 5 99999998777766654444444443221111 0
Q ss_pred ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc--CcchhhhhHHhchhHHHHHHHH
Q psy13668 137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL--HFSITSVDLISGWPNRSVIVTY 214 (513)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~--g~s~~~~~~~~~~~~~~~~ig~ 214 (513)
++++. .+.++.+++++++...+..++..........+.+.|+.+.. +.+....+..............
T Consensus 192 ~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 261 (395)
T PRK10054 192 ETGSV----------WSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQ 261 (395)
T ss_pred chhhh----------hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeeh
Confidence 00000 01256788899888887777777776667778888876543 3445556666666666666777
Q ss_pred HhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHH
Q psy13668 215 KMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVG 292 (513)
Q Consensus 215 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~ 292 (513)
+..|++.||.++|+....+.....++...+....++.+... .....+.+ .....+.......+..| +.+|+..+..+
T Consensus 262 ~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~p~~~~~~~~~~p~~~~~~~~~~~~ 340 (395)
T PRK10054 262 YSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVG-EIIYAPGEYMLIDHIAPPGMKASYFSAQS 340 (395)
T ss_pred hHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHH-HHHHHhhHHHHHHHhCCcccceehHhHHH
Confidence 88899999999999888777666666655554333332222 22222222 23333444555666665 56888888755
Q ss_pred HHHhHHhhHHHHHHHHhccch
Q psy13668 293 GIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 293 ~~~~i~~~igp~l~g~l~~~~ 313 (513)
...+|..+||.+.|.+.|..
T Consensus 341 -~~~~G~~~Gp~~~G~l~~~~ 360 (395)
T PRK10054 341 -LGWLGAAINPLVSGVILTTL 360 (395)
T ss_pred -HHHHHHHHHHHHHHHHHHHc
Confidence 67789999999999998744
No 72
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.57 E-value=1.6e-12 Score=132.99 Aligned_cols=268 Identities=15% Similarity=0.044 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHH---HHHH---H-----H---HHHHHH---------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAV---GLAW---F-----A---LWMTFA--------------- 72 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~---~~~~---~-----~---~~~~~~--------------- 72 (513)
.+...+...+|..++.+..|++.||+ |.|.+......+ +... . . +...+.
T Consensus 40 ~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~ 118 (410)
T TIGR00885 40 AALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPY 118 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHH
Confidence 67888999999999999999999999 888776532111 1111 0 0 000000
Q ss_pred ------------------hhhhhHHHHHHHHHHHHHhc--------------------------cCCchHHHHHHHHHHH
Q psy13668 73 ------------------TGAQIGNVVSMAVSGLLIRY--------------------------LGGWTSVFYVFGAVGL 108 (513)
Q Consensus 73 ------------------~~~~~g~~~~~~~~~~l~~~--------------------------~~gWr~~f~i~~~~~~ 108 (513)
....+|..+++.+++.+... . +||++|.+.+++.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~w~~~fl~~a~~~~ 197 (410)
T TIGR00885 119 ILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLA-SVQTPYMIIGAVVL 197 (410)
T ss_pred HHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 00135566677766655321 2 69999998888776
Q ss_pred HHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy13668 109 AWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYM 188 (513)
Q Consensus 109 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l 188 (513)
+..+.+. +.+ .|+.++ . ++++ .....+.++++|+|+++...+..++......+..++++.|+
T Consensus 198 ~~~~~~~-~~~-~p~~~~-~-------~~~~--------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~ 259 (410)
T TIGR00885 198 AVALLIM-LTK-MPALNH-S-------DAKQ--------ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYA 259 (410)
T ss_pred HHHHHHH-Hhc-CCCCCc-c-------cccc--------ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554333 222 222110 0 1000 00011235778899998888888888778778889999999
Q ss_pred HHhc-CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhh
Q psy13668 189 KDVL-HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGA 267 (513)
Q Consensus 189 ~~~~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 267 (513)
++.. +.+...++...........+|+++++++.||.++|++.....++..+++++....+... ....+.....+...
T Consensus 260 ~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~--~~~~l~~~glf~s~ 337 (410)
T TIGR00885 260 VRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHV--GLYCLTLCSAFMSL 337 (410)
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH--HHHHHHHHHHHHHH
Confidence 7642 34444455566666788899999999999999999988888777777777766654432 23333333445555
Q ss_pred hhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 268 FLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 268 ~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.+|.......+..+++...+.+..... .+|+++.|.+.|.+.|.
T Consensus 338 ~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 338 MFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHHHHH
Confidence 557777777777666544433333332 39999999999988873
No 73
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.57 E-value=1.5e-12 Score=133.08 Aligned_cols=259 Identities=14% Similarity=0.088 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH------HHHH----------HHHHH---HHhh--------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG------LAWF----------ALWMT---FATG-------- 74 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~------~~~~----------~~~~~---~~~~-------- 74 (513)
.++..+...++.+++.++.|.++||+ |.|.++.....+. +... ..+.+ +..+
T Consensus 53 ~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 131 (399)
T PRK05122 53 AGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGT 131 (399)
T ss_pred HHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcc
Confidence 78888999999999999999999999 8888776422111 1000 00000 0000
Q ss_pred -------------------------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchh
Q psy13668 75 -------------------------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYV 129 (513)
Q Consensus 75 -------------------------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~ 129 (513)
...|..+++++++.+.+.. |||..+.+..+..++..+ +.++.|++.+..
T Consensus 132 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~- 205 (399)
T PRK05122 132 GSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG-GLAGLGLLIMLLALLGLL----LARPRPAVPPVK- 205 (399)
T ss_pred hHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHH----HHhcCCCCCCCC-
Confidence 0245577888888888887 999988765554433221 222222221110
Q ss_pred cccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHH
Q psy13668 130 AYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRS 209 (513)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~ 209 (513)
+ ++ .++++.++ +.+.......+....+.....++|.|+++. |+ .+.+.......++
T Consensus 206 ------~-~~------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~ 261 (399)
T PRK05122 206 ------G-ER------------LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-GW--DGAALALTLFGVA 261 (399)
T ss_pred ------c-cc------------hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cc--ccchHHHHHHHHH
Confidence 0 00 01123332 223222333344455566778889988764 55 3455666777888
Q ss_pred HHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHH
Q psy13668 210 VIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLM 288 (513)
Q Consensus 210 ~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~ 288 (513)
..++++..|++.||+++|+....+..+..++...+...++........+..+.+ .+...+.......+.. ++++|++.
T Consensus 262 ~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~-~~~~~~~~~~~~~~~~~~~~~g~~~ 340 (399)
T PRK05122 262 FVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFG-FSLVFPALGVEAVKRVPPQNRGAAL 340 (399)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-HHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 899999999999999999888777777777666655544333322222223332 2333344333344444 57799999
Q ss_pred HHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 289 ALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 289 gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
|+.+...+++..++|.+.|.+.+.
T Consensus 341 g~~~~~~~~g~~~~~~~~g~l~~~ 364 (399)
T PRK05122 341 GAYSVFLDLSLGITGPLAGLVASW 364 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888763
No 74
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.56 E-value=1.2e-12 Score=134.54 Aligned_cols=272 Identities=11% Similarity=-0.015 Sum_probs=169.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH----------------HHHHHHH------------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF----------------ALWMTFA------------ 72 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~----------------~~~~~~~------------ 72 (513)
-.|+..+...++..+++++.|.++||.++.|.++.+...+..+.. .+..+..
T Consensus 39 ~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 118 (418)
T TIGR00889 39 EIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISY 118 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 378899999999999999999999998444655553222211000 0000000
Q ss_pred ----------hh--------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccc
Q psy13668 73 ----------TG--------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTA 134 (513)
Q Consensus 73 ----------~~--------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 134 (513)
.. ..+|.++++.+++.+.... .|+ +|++.+++.++..++ .+.+||.|++++.
T Consensus 119 ~~~~~~g~~~~~~~~~~r~~G~lG~~ig~~l~g~l~~~~-~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~------- 188 (418)
T TIGR00889 119 ANLPQAGLDVVTDFPPIRVMGTIGFIAAMWAVSLLDIEL-SNI-QLYITAGSSALLGVF-ALTLPDIPVAKST------- 188 (418)
T ss_pred HHHhhcCCCchhcCCCeeeehhHHHHHHHHHHHHhcccc-hhH-HHHHHHHHHHHHHHH-HhcCCCCCCCccc-------
Confidence 00 1356777777777663322 455 355555554444433 3355554322110
Q ss_pred ccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcch--------hhhhHHhchh
Q psy13668 135 VMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSI--------TSVDLISGWP 206 (513)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~--------~~~~~~~~~~ 206 (513)
++.+..+ ..+.+.+.++|+++++...+..++..........+.|.|+++. |.++ ...+...+..
T Consensus 189 ---~~~~~~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~ 260 (418)
T TIGR00889 189 ---AKMSIKV----MLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLS 260 (418)
T ss_pred ---cccCHHH----HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHH
Confidence 0000000 0011234678889888887777777666666677888888764 5443 5568888888
Q ss_pred HHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh--HHHHH--HHHHHHHHHhhhhhhHHHhhcccCc-
Q psy13668 207 NRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR--LAVTV--SFTLGMGTMGAFLPSLKVNALDLSP- 281 (513)
Q Consensus 207 ~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p- 281 (513)
.+..+++.+..|+++||+++|+.+..+.++..++...+.....+. ...+. .+..+.+ .+...+.......+..|
T Consensus 261 ~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~-~~~~~~~~~~~i~~~~p~ 339 (418)
T TIGR00889 261 QFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCA-FDFFNISGSVFVEKEVPV 339 (418)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCH
Confidence 899999999999999999999999988888877766665533222 11111 1222222 23334444555666665
Q ss_pred chhHHHHHHHH-HHHhHHhhHHHHHHHHhcc
Q psy13668 282 NYAGTLMALVG-GIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 282 ~~~g~~~gi~~-~~~~i~~~igp~l~g~l~~ 311 (513)
+++|++.|+.+ ....++.+++|.+.|.+.+
T Consensus 340 ~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~ 370 (418)
T TIGR00889 340 HIRASAQGLFTLMCNGFGSLLGYILSGVMVE 370 (418)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 67999999997 5678999999999998876
No 75
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.56 E-value=4.2e-14 Score=144.48 Aligned_cols=151 Identities=13% Similarity=0.052 Sum_probs=110.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668 160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL 239 (513)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 239 (513)
++++....+..+............+|.++++.+|.|..+.++..+...++..++++..|+++||+|||+++..+.+..++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL 93 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence 46677777888888888777888999999988999999999999999999999999999999999999999988877666
Q ss_pred HHHHHHhc---CChh---HHHHH--HHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 240 GILAASYS---GCNR---LAVTV--SFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 240 ~~~~l~~~---~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
+.+.+... .+.. ...++ .+..+.+ .+...+.......+.. +++|+++.++......++..++|.+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 172 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIG-ESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY 172 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhh-HHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 54433322 1111 11111 1222222 2233333344444444 678999999988888888899999988876
Q ss_pred c
Q psy13668 311 P 311 (513)
Q Consensus 311 ~ 311 (513)
+
T Consensus 173 ~ 173 (399)
T PRK05122 173 H 173 (399)
T ss_pred H
Confidence 5
No 76
>KOG2504|consensus
Probab=99.55 E-value=2.6e-13 Score=141.01 Aligned_cols=205 Identities=15% Similarity=0.150 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH---H---HH-HHH--------------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL---A---WF-ALW-------------------------- 68 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~---~---~~-~~~-------------------------- 68 (513)
.+...+....-..+..|+.+.++|++ |-|.+-.+-+++.. + ++ -+|
T Consensus 83 ~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~ 161 (509)
T KOG2504|consen 83 IAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILG 161 (509)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhh
Confidence 56666666666677788999999999 88887665433221 1 11 011
Q ss_pred -----------HHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccc----------
Q psy13668 69 -----------MTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTH---------- 127 (513)
Q Consensus 69 -----------~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~---------- 127 (513)
.+...++++|..+.|++...+.+.+ |||+.+.+.+.+.+..+.......|..+...+.
T Consensus 162 ~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~-G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~ 240 (509)
T KOG2504|consen 162 TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY-GWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAA 240 (509)
T ss_pred hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccc
Confidence 1333344577788888888999998 999999999888887777776666633322111
Q ss_pred -----------h--hccccccc---ccchhhhhccC-----CCCCCch---hhhccchhHHHHHHHHHHHHHHHHHHHhh
Q psy13668 128 -----------Y--VAYGTAVM---HKSNRFIFSFQ-----NLPPTPW---GKIATSAPVIGLIIAQIGHDFGLFTIVTD 183 (513)
Q Consensus 128 -----------~--~~~~~~~~---~~~~~~~~~~~-----~~~~~~~---~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 183 (513)
. .......+ ..+....+.+. ..+.... .++++++.++...+...+...+++....+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~ 320 (509)
T KOG2504|consen 241 SVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVY 320 (509)
T ss_pred cccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000000 00000000000 0011111 57889999999999999999999999999
Q ss_pred HHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668 184 LPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPF 229 (513)
Q Consensus 184 lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 229 (513)
+|.|.. .++++..++..+.+..++..++++++.|+++|+...++.
T Consensus 321 l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~ 365 (509)
T KOG2504|consen 321 LPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL 365 (509)
T ss_pred HHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH
Confidence 999998 569999999999999999999999999999999874433
No 77
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.55 E-value=3.1e-12 Score=127.53 Aligned_cols=246 Identities=23% Similarity=0.312 Sum_probs=181.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH-----------HH--------------------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL-----------WM-------------------- 69 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~-----------~~-------------------- 69 (513)
..+...+...++..++.++.|.+.||+ |.|..+.....+..+.... ..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 113 (352)
T cd06174 35 QAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIA 113 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHH
Confidence 367788888999999999999999999 8887655322211111100 00
Q ss_pred -------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q psy13668 70 -------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVM 136 (513)
Q Consensus 70 -------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 136 (513)
.......+|..+++.+++.+.+.. +||+.+.+.+++.++..+...+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------------------- 173 (352)
T cd06174 114 EWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-GWRWLFLILAILGLLLALLLLFL------------------- 173 (352)
T ss_pred HhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 001111366778888888888877 89999988777666554433221
Q ss_pred ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHh
Q psy13668 137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKM 216 (513)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~ 216 (513)
. |+++...+..++..........+.|.++++.+|.+..+.+.......++..++++.
T Consensus 174 ------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 230 (352)
T cd06174 174 ------------------L-----RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALL 230 (352)
T ss_pred ------------------H-----HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 45666777777888888889999999999988999999999999999999999999
Q ss_pred hhhhcCCCcccc-hhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHH
Q psy13668 217 RTILSGPRLTSP-FDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGI 294 (513)
Q Consensus 217 ~g~l~dr~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~ 294 (513)
.+++.||.+||+ ....+.....++...+...++... ......+.....+...+.......+..| ++|++..|+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (352)
T cd06174 231 GGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLAL-LLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTF 309 (352)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 999999999999 888888877777777766554322 2222222233344455566666666665 7799999999999
Q ss_pred HhHHhhHHHHHHHHhcc
Q psy13668 295 GALSGTVSPYLVGVLTP 311 (513)
Q Consensus 295 ~~i~~~igp~l~g~l~~ 311 (513)
.+++..++|.+.|.+.+
T Consensus 310 ~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 310 GSLGGALGPLLAGLLLD 326 (352)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999886
No 78
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.55 E-value=2.8e-12 Score=130.79 Aligned_cols=271 Identities=11% Similarity=-0.031 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHH------HHHHHH--HHHHHHH---------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGA------VGLAWF--ALWMTFA--------------------- 72 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~------~~~~~~--~~~~~~~--------------------- 72 (513)
.+...+.+.++.++..++.|+++||+ |.|.++..... +.+.+. .......
T Consensus 40 ~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~a~~~pa~~a~i~~~~~ 118 (393)
T PRK11195 40 QPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGCLLMLFGIHPLLAYGLVGIGAAAYSPAKYGILTELLP 118 (393)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 67788889999999999999999999 99888764221 111110 0000000
Q ss_pred ------------hhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccch
Q psy13668 73 ------------TGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSN 140 (513)
Q Consensus 73 ------------~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 140 (513)
.....+.+++|.+++.+.+. .|+..+.+.+...+.. .+..+.+|+.|++++.. +.+..
T Consensus 119 ~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~-------~~~~~ 188 (393)
T PRK11195 119 GEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQ-------SWNPI 188 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH-HHHHhcCCCCccccccc-------CCCHH
Confidence 01125677888888888764 5777776655443322 23334556544332211 11110
Q ss_pred hhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhh
Q psy13668 141 RFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTIL 220 (513)
Q Consensus 141 ~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l 220 (513)
...++ ....++.+++++.+.......++............|.|+++.+|+++.+.+.+.....++.+++++..+++
T Consensus 189 ~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l 264 (393)
T PRK11195 189 ALLRD----FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARL 264 (393)
T ss_pred HHHHH----HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 00112456777776655554444445555666778889999999999999999999999999999999999
Q ss_pred cCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHH-HHHHHHHhhhhhhHHHhhcccCcch--hHHHHHHHHHHHhH
Q psy13668 221 SGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSF-TLGMGTMGAFLPSLKVNALDLSPNY--AGTLMALVGGIGAL 297 (513)
Q Consensus 221 ~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~--~g~~~gi~~~~~~i 297 (513)
.||.++++....+.. .++....+...+ +.+...... ..+. +.+...+...+..++..|++ +|.+.++.+...++
T Consensus 265 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~-~~~~~~~~~~~~G~-~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~ 341 (393)
T PRK11195 265 VTLETVLRVLPAGIL-MGLVVLLMALQH-SLLPAYPLLILIGA-LGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENL 341 (393)
T ss_pred hcCCcccchHHHHHH-HHHHHHHHHHHh-HHHHHHHHHHHHHH-hhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHH
Confidence 999988887766643 333333333322 222222222 2333 23344444555566767664 69999999999999
Q ss_pred HhhHHHHHHHHhc
Q psy13668 298 SGTVSPYLVGVLT 310 (513)
Q Consensus 298 ~~~igp~l~g~l~ 310 (513)
+..++..+.+.+.
T Consensus 342 ~~~~~~~~~~~~~ 354 (393)
T PRK11195 342 AMLLMLGLYSLLV 354 (393)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998887553
No 79
>KOG2532|consensus
Probab=99.54 E-value=4.1e-14 Score=145.16 Aligned_cols=258 Identities=25% Similarity=0.423 Sum_probs=176.4
Q ss_pred echhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHH-HH
Q psy13668 6 INNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLAWFALWMTFATGAQIGN-VV 81 (513)
Q Consensus 6 ~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~-~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~-~~ 81 (513)
.++.+.++|.| ||++..++..++.++|++++.|++|.|++. . ||+++||++|.++++|.++|..+..+.|.-. -+
T Consensus 148 a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~-GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~i 226 (466)
T KOG2532|consen 148 AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL-GWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNI 226 (466)
T ss_pred hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC-CCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 35778899995 999999999999999999999999999999 6 9999999999999999999999999887321 00
Q ss_pred HHHHHHHHHh-----c-----cCCchHHHHHHHHHHHHHHHHH-----HHhccCCCCCccchhcccccccccchhhhhcc
Q psy13668 82 SMAVSGLLIR-----Y-----LGGWTSVFYVFGAVGLAWFALW-----MTFASSDPSESTHYVAYGTAVMHKSNRFIFSF 146 (513)
Q Consensus 82 ~~~~~~~l~~-----~-----~~gWr~~f~i~~~~~~~~~~~~-----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 146 (513)
..---..+.+ . ..+|+.++.-..+.++.+.-.. ..++- ..|.+ .++..+.+.++
T Consensus 227 s~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~----y~PtY-------~~~VL~f~v~~ 295 (466)
T KOG2532|consen 227 SEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLT----YLPTY-------LKEVLGFDVRE 295 (466)
T ss_pred CHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHH----HhhHH-------HHHHhCCChhh
Confidence 0000011110 0 1268877654333333222110 11111 11233 22222221110
Q ss_pred CCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcc
Q psy13668 147 QNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLT 226 (513)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 226 (513)
...+..-++...++..+. ..++.|++. ...++++..|
T Consensus 296 --------~G~~salP~l~~~~~k~~------------~g~lsD~l~-----------------------~~~ls~t~~r 332 (466)
T KOG2532|consen 296 --------TGFLSALPFLAMAIVKFV------------AGQLSDRLT-----------------------FRILSETTVR 332 (466)
T ss_pred --------hhHHHHHHHHHHHHHHHH------------HHHHHHHHh-----------------------hccCchHhHH
Confidence 233333333333332222 234444431 1134555667
Q ss_pred cchhhHhhHHHHHHHHHHHhcCChh-HHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668 227 SPFDFSASVGPGLGILAASYSGCNR-LAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYL 305 (513)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l 305 (513)
|....++..+.+++++.+.+.++.. +..+.++.+++++.+...+....+..|..|++.+..+|+.|+...+.+.++|.+
T Consensus 333 kifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~ 412 (466)
T KOG2532|consen 333 KIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLL 412 (466)
T ss_pred HHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7778888999999999999988644 577788888899999999999999999999999999999999999999999999
Q ss_pred HHHhccchhhhHH
Q psy13668 306 VGVLTPNWLAKQI 318 (513)
Q Consensus 306 ~g~l~~~~~~~~l 318 (513)
+|.+.++...+.|
T Consensus 413 vg~~~~~~t~~eW 425 (466)
T KOG2532|consen 413 VGIIVTDNTREEW 425 (466)
T ss_pred eeeEeCCCCHHHH
Confidence 9999953355566
No 80
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.54 E-value=6.4e-13 Score=138.47 Aligned_cols=289 Identities=12% Similarity=0.078 Sum_probs=164.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH---HHH-----------HHHH----------------
Q psy13668 20 SNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL---AWF-----------ALWM---------------- 69 (513)
Q Consensus 20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~---~~~-----------~~~~---------------- 69 (513)
...++..+...++..++.++.|++.||+ |.|.++.....+.. ... .+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 71 SLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 4478888999999999999999999999 88887764222111 110 0000
Q ss_pred -----------------HHHhhhhhHHHHHHHHH---HHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc---c
Q psy13668 70 -----------------TFATGAQIGNVVSMAVS---GLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES---T 126 (513)
Q Consensus 70 -----------------~~~~~~~~g~~~~~~~~---~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~---~ 126 (513)
.......+|..+++.++ ....... +||+.|.+.++..++. ++..++++|.|... .
T Consensus 150 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~ 227 (481)
T TIGR00879 150 MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL-GWRIPLGLQLIPAGLL-FLGLFFLPESPRWLVGKG 227 (481)
T ss_pred HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc-cHHHHHHHHHHHHHHH-HHHHhcCCCChHHHHHcC
Confidence 00001124455555555 3333445 9999999855544443 34445566655311 0
Q ss_pred chhc-cc--cc---ccccchhhhh---------c-cCCCCCCchhhhcc------chhHHHHHHHHHHHHHHHHHHHhhH
Q psy13668 127 HYVA-YG--TA---VMHKSNRFIF---------S-FQNLPPTPWGKIAT------SAPVIGLIIAQIGHDFGLFTIVTDL 184 (513)
Q Consensus 127 ~~~~-~~--~~---~~~~~~~~~~---------~-~~~~~~~~~~~~l~------~~~~~~~~l~~~~~~~~~~~~~~~l 184 (513)
..++ .. .. .++++..... + ..+..+..+.+.++ .+.++...+..+...........+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (481)
T TIGR00879 228 RVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYS 307 (481)
T ss_pred ChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHH
Confidence 0000 00 00 0000000000 0 00000011122222 1223333333333333334455667
Q ss_pred HHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHh---cCCh------hH-HH
Q psy13668 185 PKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASY---SGCN------RL-AV 254 (513)
Q Consensus 185 p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~---~~~~------~~-~~ 254 (513)
|.+++ .+|++..+.+.......++..+++++.|+++||.+||+....+....+++.+.+.. .... .. ..
T Consensus 308 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (481)
T TIGR00879 308 PTIFE-NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI 386 (481)
T ss_pred HHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence 76665 46999988889999999999999999999999999999888877766666555542 1111 22 22
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 255 TVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
........++.....+.......|..| ++|+++.|+.+...+++++++|.+.+.+.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 387 VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222222222233333445566677776 5699999999999999999999999887763
No 81
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.54 E-value=9.6e-13 Score=134.08 Aligned_cols=217 Identities=12% Similarity=-0.020 Sum_probs=141.2
Q ss_pred hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCch
Q psy13668 75 AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPW 154 (513)
Q Consensus 75 ~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (513)
..+|..+++...+.+.+.. |||..|++.+.+.++..+..++..+++|++ ++. +++ +..+.
T Consensus 142 ~~lG~~~g~~~~~~l~~~~-gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~-~~~-------~~~-----------~~~~~ 201 (390)
T TIGR02718 142 VMIGFFGGGAGTLVLFGKF-GQRPAFLLVACVPLASLVCVLWLKDRAVAS-PEA-------PLA-----------RRASL 201 (390)
T ss_pred HHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHcCCCCcCc-ccc-------chh-----------hHHHH
Confidence 3456666666666677776 899999888877766554444333332211 100 000 01134
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH-HHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN-RSVIVTYKMRTILSGPRLTSPFDFSA 233 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~~~~~~~ 233 (513)
++.+|+|.++......++..........+.+.|++| .|+++++.+.+..... ...+++....|++.||+++|+....+
T Consensus 202 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~ 280 (390)
T TIGR02718 202 FRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILG 280 (390)
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 678888888887777777777778888899999988 5999999999888776 46778899999999999999887776
Q ss_pred hHHHHHHHH-HHHhc----CChhHHHHHHHHHHHHHHhhhhhhHHHhh-cccCc-chhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668 234 SVGPGLGIL-AASYS----GCNRLAVTVSFTLGMGTMGAFLPSLKVNA-LDLSP-NYAGTLMALVGGIGALSGTVSPYLV 306 (513)
Q Consensus 234 ~~~~~~~~~-~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~ 306 (513)
....++... ..... ............+.....+...+...... ....+ +++|+..++.+...+++..++|.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~ 360 (390)
T TIGR02718 281 VGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIA 360 (390)
T ss_pred HHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 654422222 21111 11112222222222222334434443333 33344 6799999999999999999999999
Q ss_pred HHhccc
Q psy13668 307 GVLTPN 312 (513)
Q Consensus 307 g~l~~~ 312 (513)
|.+.|.
T Consensus 361 G~l~~~ 366 (390)
T TIGR02718 361 GYLTDR 366 (390)
T ss_pred HHHHHH
Confidence 988864
No 82
>PRK12382 putative transporter; Provisional
Probab=99.54 E-value=6.9e-12 Score=127.85 Aligned_cols=259 Identities=12% Similarity=0.062 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH----HHH------------HHHHH------------HH--
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG----LAW------------FALWM------------TF-- 71 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~----~~~------------~~~~~------------~~-- 71 (513)
.++..+...++..++.++.|.++||+ |.|+++....... ..+ ..... ..
T Consensus 53 ~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 131 (392)
T PRK12382 53 VGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLT 131 (392)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888899999999999999999999 8888766421110 000 00000 00
Q ss_pred ----------------------HhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchh
Q psy13668 72 ----------------------ATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYV 129 (513)
Q Consensus 72 ----------------------~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~ 129 (513)
......|..+++++++.+.+.. |||..+.+..+..++.. .+.++.|++++.
T Consensus 132 ~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-- 204 (392)
T PRK12382 132 GALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF-GFAALALTTMVLPLLAW----AFNGTVRKVPAH-- 204 (392)
T ss_pred HHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHHHHH----HHHHhccCCCCC--
Confidence 0000245667888888888877 99987665433322221 122322221110
Q ss_pred cccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHH
Q psy13668 130 AYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRS 209 (513)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~ 209 (513)
++++ .+.++.++ .++...+..++..........+.|.|+++. +++ +.+.......++
T Consensus 205 ------~~~~------------~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~ 261 (392)
T PRK12382 205 ------AGER------------PSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFASK-GWA--MAGFTLTAFGGA 261 (392)
T ss_pred ------cccC------------chHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHhc-CCc--hhHHHHHHHHHH
Confidence 0000 01122221 122222222333445556677888888764 554 345556667778
Q ss_pred HHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHH
Q psy13668 210 VIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLM 288 (513)
Q Consensus 210 ~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~ 288 (513)
..++++..|++.||+++|+....+.....++...+...++...........+ ...+...+.......+.. +++||++.
T Consensus 262 ~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~ 340 (392)
T PRK12382 262 FVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG-AGCSLIFPALGVEVVKRVPSQVRGTAL 340 (392)
T ss_pred HHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH-HHHHhHHHHHHHHHHHhcCHHHHHHHH
Confidence 8899999999999999999888877777776666555443322222222222 222333444444444444 67899999
Q ss_pred HHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 289 ALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 289 gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
|+.+...+++..++|.+.|.+.+.
T Consensus 341 g~~~~~~~~g~~ig~~~~g~l~~~ 364 (392)
T PRK12382 341 GGYAAFQDIAYGVSGPLAGMLATS 364 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988874
No 83
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.52 E-value=3e-12 Score=134.06 Aligned_cols=130 Identities=10% Similarity=0.057 Sum_probs=91.4
Q ss_pred HHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc--CC-hhHHH
Q psy13668 178 FTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS--GC-NRLAV 254 (513)
Q Consensus 178 ~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~--~~-~~~~~ 254 (513)
+...++.|.++++ .|++............+...++.++.++++||++||+....+.++.+++.+.+... .. .....
T Consensus 288 ~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 288 NVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred hHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 3445567777665 68888777777778888999999999999999999999988888877776665432 11 11122
Q ss_pred HH-HHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668 255 TV-SFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGV 308 (513)
Q Consensus 255 ~~-~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~ 308 (513)
.. .+..+.++.....+.......|..| ++|+++.|+.+...++++++++.+.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~ 422 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPM 422 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 11 1222222222233556677777776 679999999999999999999877643
No 84
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=2.2e-13 Score=138.87 Aligned_cols=152 Identities=16% Similarity=0.112 Sum_probs=107.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668 160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL 239 (513)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 239 (513)
++.++...+..++...........+|.++++.+|.|..+.+++.+...+...++++..|+++||+|||+....+.+...+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGL 93 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHH
Confidence 44556666666666666667777888899888999999999999999999999999999999999999998887776655
Q ss_pred HHHHH---HhcCC----hhHHH-HHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 240 GILAA---SYSGC----NRLAV-TVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 240 ~~~~l---~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
+.+.. ...+. +.... +..+..+.+. +...+.......+.. +++|+++.+......+++..++|.+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~ 172 (392)
T PRK12382 94 AGLAYLLAAILPVSAPFKFALLVVGRLILGFGE-SQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH 172 (392)
T ss_pred HHHHHHhhhccccchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 43322 11111 11111 1222223222 223333344444554 578999999999988999999999988776
Q ss_pred cc
Q psy13668 311 PN 312 (513)
Q Consensus 311 ~~ 312 (513)
+.
T Consensus 173 ~~ 174 (392)
T PRK12382 173 SH 174 (392)
T ss_pred hc
Confidence 53
No 85
>PRK10054 putative transporter; Provisional
Probab=99.50 E-value=7.6e-13 Score=135.01 Aligned_cols=150 Identities=15% Similarity=0.057 Sum_probs=116.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
++++.+.+..++...+.+....++|.|+++.+|+|..+.++..+...+...++++..|+++||++||+....+.+...++
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~ 86 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASG 86 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH
Confidence 45677777888888888899999999999999999999999999999999999999999999999999988888777777
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.+.+.+.++.... +....+.........+.......|.. +++|+++.|+.+...++|..++|.+.+.+.+
T Consensus 87 ~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 87 FIAIPLVNNVTLV-VLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666655443222 22222212222333444555556665 5679999999999999999999999998764
No 86
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.46 E-value=2.6e-13 Score=139.69 Aligned_cols=156 Identities=10% Similarity=-0.048 Sum_probs=106.8
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668 156 KIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV 235 (513)
Q Consensus 156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 235 (513)
..++++++|...+..++...+...+..++|.|+++.+|+|..+.++..+...+...++++..|+++||+|||+....+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~ 84 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS 84 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 45678899999988888888888899999999999999999999999999999999999999999999999998876555
Q ss_pred HHHHHHHHHHh-cCChhHH--HHHHHHHHHHHHhhhhhhHHHhhccc---CcchhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 236 GPGLGILAASY-SGCNRLA--VTVSFTLGMGTMGAFLPSLKVNALDL---SPNYAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 236 ~~~~~~~~l~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
+.+++...+.. ....... .......+....+...........+. .++++|...|..+...++|..++|.+.|.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 164 (420)
T PRK09528 85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGIL 164 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHH
Confidence 44433322111 1010000 01111111111111111111111111 234577788888888999999999999988
Q ss_pred cc
Q psy13668 310 TP 311 (513)
Q Consensus 310 ~~ 311 (513)
.+
T Consensus 165 ~~ 166 (420)
T PRK09528 165 FN 166 (420)
T ss_pred Hh
Confidence 65
No 87
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=1.6e-12 Score=133.15 Aligned_cols=148 Identities=14% Similarity=0.121 Sum_probs=107.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh-----hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS-----VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV 235 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~-----~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 235 (513)
+.+...++..++..........++|.+.++ +|.+..+ .+...+...+...++.+..|+++||++||+....+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 345566667777777777788889999876 6887654 3778888899999999999999999999999888887
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 236 GPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
..+++.+.+...++.....+..+..+.+ +...+.......+.. +++|+.+.+..+....++..++|.+.+.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 167 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLL--GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD 167 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHh--hhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766665543333332222333322 223344444444444 5679999999999999999999999988765
No 88
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.46 E-value=4.8e-13 Score=137.57 Aligned_cols=155 Identities=17% Similarity=0.113 Sum_probs=111.6
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS 234 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 234 (513)
+.+.+++.+....+..++...........+|.+.++. +.+..+.+++.+...++..++++..|+++||++||+.+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~ 89 (417)
T PRK10489 11 SLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMM-TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLAR 89 (417)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehH
Confidence 3344677887777777777777777777888888764 679999999999999999999999999999999999888776
Q ss_pred HHHHHHHHHHH---hcCC-hhHHHHHH-HHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668 235 VGPGLGILAAS---YSGC-NRLAVTVS-FTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGV 308 (513)
Q Consensus 235 ~~~~~~~~~l~---~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~ 308 (513)
+..+++...+. +... +....... +..+. +.+...+.......+.. +++++++.++.+...+++..+||.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~ 168 (417)
T PRK10489 90 GTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGF-FGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGL 168 (417)
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-HHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHH
Confidence 66665544432 2222 22222222 22222 23333444445555555 5679999999999999999999999988
Q ss_pred hcc
Q psy13668 309 LTP 311 (513)
Q Consensus 309 l~~ 311 (513)
+.+
T Consensus 169 l~~ 171 (417)
T PRK10489 169 LIA 171 (417)
T ss_pred HHH
Confidence 765
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.45 E-value=1.4e-11 Score=126.06 Aligned_cols=156 Identities=12% Similarity=-0.012 Sum_probs=94.1
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhH-HHHHHHHHhhhhhcCCCcccchhhH
Q psy13668 154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPN-RSVIVTYKMRTILSGPRLTSPFDFS 232 (513)
Q Consensus 154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~~~~~~ 232 (513)
+++++++|.++...+..++..........+.+.++.+.+|+++.+.+++..... .+..++.+++|++.||+++|+....
T Consensus 202 ~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~ 281 (402)
T PRK11902 202 LRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLML 281 (402)
T ss_pred HHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 467889998887777666655544444456666777888999999998876654 5689999999999999999887766
Q ss_pred hhHHHHHHHHHH---HhcCChhHHHHHHHHHHHHH----HhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668 233 ASVGPGLGILAA---SYSGCNRLAVTVSFTLGMGT----MGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYL 305 (513)
Q Consensus 233 ~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l 305 (513)
+..+..+..+.+ ...+++.+.......+.... .+...........+..| ++..++.+....++..+++.+
T Consensus 282 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~ 358 (402)
T PRK11902 282 FGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPT 358 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHH
Confidence 665544443322 23333333222222111112 22223333444444443 333455555556666656667
Q ss_pred HHHhccc
Q psy13668 306 VGVLTPN 312 (513)
Q Consensus 306 ~g~l~~~ 312 (513)
.|.+.|.
T Consensus 359 ~G~l~~~ 365 (402)
T PRK11902 359 SGYLVEA 365 (402)
T ss_pred HHHHHHH
Confidence 7766654
No 90
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.45 E-value=5e-11 Score=124.56 Aligned_cols=277 Identities=16% Similarity=0.161 Sum_probs=177.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHH----HHHHHH--------HHH----HHHhh-------
Q psy13668 18 QQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAV----GLAWFA--------LWM----TFATG------- 74 (513)
Q Consensus 18 r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~----~~~~~~--------~~~----~~~~~------- 74 (513)
-....+++.+...+...+..+++|.++|++ +.|.+....-.+ .....+ .|. .+..+
T Consensus 43 S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~ 121 (524)
T PF05977_consen 43 SPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFN 121 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 344488888889999999999999999999 888887642111 111110 000 00000
Q ss_pred --------------------------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccch
Q psy13668 75 --------------------------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHY 128 (513)
Q Consensus 75 --------------------------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~ 128 (513)
.++..+++|.++|.+.... |=.+.|.+-++.-++.. ......+.++++++ .
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~-G~~~~f~inalsfl~~i-~~l~~~~~~~~~~~-~ 198 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF-GAAAAFLINALSFLISI-LALLRWKPPPPPSS-L 198 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHccccccccc-c
Confidence 0244577788888887776 77777776554333322 22223332211111 1
Q ss_pred hcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH
Q psy13668 129 VAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR 208 (513)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~ 208 (513)
+ +|+ .. +.-+..++.+.+++.........++.+.....+...+|.+.++.+|.++...|++.+..++
T Consensus 199 -------~-~e~-~~----~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gv 265 (524)
T PF05977_consen 199 -------P-RER-FF----SALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGV 265 (524)
T ss_pred -------c-hhh-hh----hhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHH
Confidence 1 110 00 0011123444445655544444444444444555678999999999999999999999999
Q ss_pred HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHH
Q psy13668 209 SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTL 287 (513)
Q Consensus 209 ~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~ 287 (513)
+.++|.++.+++.+|.++++....+.+..+++++.+.+.++.+.....++..+. +.........+..+...| +.+|++
T Consensus 266 Gai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~-~~~~~~~~~~t~~Q~~~P~~~~GRv 344 (524)
T PF05977_consen 266 GAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGA-AWIIANSSLNTLVQLSVPDWVRGRV 344 (524)
T ss_pred HHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHhHH
Confidence 999999999999999999888888888877777777666554443333333333 334444455555666655 569999
Q ss_pred HHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 288 MALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 288 ~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.++.++....+..+|..+.|.+.+.
T Consensus 345 ~si~~~~~~g~~~lGsll~G~la~~ 369 (524)
T PF05977_consen 345 FSIYQMVFFGGMPLGSLLWGFLADH 369 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887764
No 91
>PRK03545 putative arabinose transporter; Provisional
Probab=99.45 E-value=2.6e-12 Score=130.87 Aligned_cols=147 Identities=13% Similarity=0.036 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL 242 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 242 (513)
.+...+..+......+.....+|.+ ++.+|.|..+.++..+...++..++.+..|++.||++||+++..+.+...++.+
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 89 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDI-AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHV 89 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHH-HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence 4444444444434444444456665 556899999999999999999999999999999999999999999888888877
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
...+.++-....+..+..+.+. +...+.......+.. +++|+.+.|+.....+++..++|.+.+.+.+
T Consensus 90 ~~~~~~~~~~l~~~r~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 90 LSALAWNFTVLLISRIGIAFAH-AIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHhccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 7776655443333333333322 334444555566665 5679999999999999999999999988765
No 92
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.43 E-value=3.8e-12 Score=130.12 Aligned_cols=147 Identities=14% Similarity=0.113 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668 164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA 243 (513)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 243 (513)
+......++...+.+....++|.|+++.+|.|..+.++......+...+.+++.|+++||++||+....+.+..+++.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 55667777778888888999999999999999999999999999999999999999999999999999988888888777
Q ss_pred HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
....++........+..+.+ .+...+.......+.. +++++++.|+.+...+++..+||.+.+.+.+
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~ 160 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLG-GTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ 160 (400)
T ss_pred HHHhccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76654433322222222222 3344455555566665 5689999999999999999999999988864
No 93
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.42 E-value=8.6e-12 Score=127.72 Aligned_cols=146 Identities=12% Similarity=0.042 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668 164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA 243 (513)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 243 (513)
...+...+......+......|.+.+ .+|.|..+.+++.+...++..++.+..|+++||+|||+....+.++..++.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 96 (406)
T PRK11551 18 GLCFLVALLEGLDLQSAGVAAPRMAQ-EFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLA 96 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 33444444444445555556676655 47999999999999999999999999999999999999999888877777766
Q ss_pred HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
..+.++.....+..+..+. ..+...+.......|.. +++|+++.++.+....+++.++|.+.+.+.+
T Consensus 97 ~~~~~~~~~~~~~~~l~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 97 TAQAWDFPSLLVARLLTGV-GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHhccHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 6665443333333333333 23344555566666766 4779999999999999999999988766655
No 94
>KOG1330|consensus
Probab=99.41 E-value=2.5e-13 Score=133.71 Aligned_cols=195 Identities=11% Similarity=0.074 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH------HHHHHHHHHH-HHH-------------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV------FGAVGLAWFA-LWM------------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~------~g~~~~~~~~-~~~------------------------- 69 (513)
.|+....+.+...+..|+.|+|.||+ ++++++.+ .+.++..+.. .|.
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD 148 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIAD 148 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhh
Confidence 55667778889999999999999999 98877542 2222222221 111
Q ss_pred ------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc-cchhccccccc
Q psy13668 70 ------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES-THYVAYGTAVM 136 (513)
Q Consensus 70 ------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~ 136 (513)
++....|.|..++.+.+..+......|||.|...++++++++++.+++.+|+++.. ++. +
T Consensus 149 ~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~-------~ 221 (493)
T KOG1330|consen 149 SFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEV-------D 221 (493)
T ss_pred cCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccccccc-------c
Confidence 22222245555555555555555523999999999999999988888877654321 111 1
Q ss_pred ccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc---CcchhhhhHHhchhHHHHHHH
Q psy13668 137 HKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVL---HFSITSVDLISGWPNRSVIVT 213 (513)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~---g~s~~~~~~~~~~~~~~~~ig 213 (513)
.+. +. .....+...+.+...+++.+....+.........-++..|.|.++...+ |.+..+...+..+...++.+|
T Consensus 222 ~~~-~~-~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lG 299 (493)
T KOG1330|consen 222 GEN-KM-VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLG 299 (493)
T ss_pred cCC-cC-CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhh
Confidence 100 00 0111112233455566677766677666666666667777777766543 456667777888888899999
Q ss_pred HHhhhhhcCCCcc
Q psy13668 214 YKMRTILSGPRLT 226 (513)
Q Consensus 214 ~~~~g~l~dr~~~ 226 (513)
.+.+|.++||+.|
T Consensus 300 vl~Ggiisd~~~~ 312 (493)
T KOG1330|consen 300 VLFGGIISDKLSR 312 (493)
T ss_pred heehHHHHHHHHH
Confidence 9999999999554
No 95
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.41 E-value=2e-12 Score=128.80 Aligned_cols=270 Identities=19% Similarity=0.185 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668 165 GLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA 244 (513)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l 244 (513)
......+......+......|.+.++ +|.+..+.+.......+...++.+..|+++||++||+....+.+...++....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence 34455566666777777888888766 59999999999999999999999999999999999999888888888888777
Q ss_pred HhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccchhhh-------
Q psy13668 245 SYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAK------- 316 (513)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~------- 316 (513)
...++... ......+.....+...+.......|..| ++|++..++.+....++..++|.+.+.+.+....+
T Consensus 82 ~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 82 AFASSLWL-LLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred HHhccHHH-HHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 66643322 2222222222334555666777777776 57999999999999999999999998887632000
Q ss_pred ----------------------------------------HHHh--h--------------------------hhhhhhh
Q psy13668 317 ----------------------------------------QICN--S--------------------------VTYKMRT 328 (513)
Q Consensus 317 ----------------------------------------~l~~--~--------------------------~~~~~~~ 328 (513)
...+ + ..++.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 240 (352)
T cd06174 161 ILGLLLALLLLFLLRLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGR 240 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 0 0011010
Q ss_pred ccCCCCCCCc-cchhhcccchhhhhhhhccCCchhHHHHHHHhhhcccccccccccccccC-CCCCccchhhhhhhhhhh
Q psy13668 329 ILSGPTLTSP-FDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALD-LSPNYAGTLMALVGGIGA 406 (513)
Q Consensus 329 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~ 406 (513)
.. ....+.....++.+.....+ +.........+.....+...+.......+ .+++++++.+|+.+..++
T Consensus 241 --------~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (352)
T cd06174 241 --------RRLLLLIGLLLAALGLLLLALAP-SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGS 311 (352)
T ss_pred --------hhHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 01 22223333333333333332 22222222222222333334444444444 455889999999999999
Q ss_pred cccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHh
Q psy13668 407 LSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCF 463 (513)
Q Consensus 407 ~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~ 463 (513)
++..++|.+.|.+.+.. +|+.+|.+.+++.+++.++..+
T Consensus 312 ~~~~i~~~i~g~l~~~~------------------~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 312 LGGALGPLLAGLLLDTG------------------GYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHhccc------------------CcchHHHHHHHHHHHHHHHhee
Confidence 99999999999998743 7889999999998888776543
No 96
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.41 E-value=3.2e-12 Score=129.80 Aligned_cols=149 Identities=14% Similarity=0.067 Sum_probs=114.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
++++..++..++...........+|.+.++ +|.|..+.+++.+...++..++++..|+++||+|||+....+.+..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~ 84 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777788888777777788899999876 6999999999999999999999999999999999999999888888887
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHH-hhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKV-NALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.......++.....+..+..+.+ .+...+.... ...+..+++|+.+.+..+...++|..++|.+.+.+.+
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 85 CAGLGLMVGFWSWLAWRFVAGIG-CAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 77766655433333333333333 2333333333 3334446789999999999999999999999988765
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.40 E-value=1.4e-11 Score=132.35 Aligned_cols=206 Identities=15% Similarity=0.154 Sum_probs=135.3
Q ss_pred eechhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy13668 5 VINNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVS 82 (513)
Q Consensus 5 ~~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 82 (513)
.+..+.+.||+| +|+++.++..++..+|+++|++++|.+.+.+.+|+...- .+.+ +.
T Consensus 191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~-------------------~~~~--l~ 249 (633)
T TIGR00805 191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNT-------------------EDVI--LT 249 (633)
T ss_pred hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCC-------------------CCCC--CC
Confidence 345678889994 577889999999999999999999999876535533210 0000 00
Q ss_pred HHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhh---hcc--C------CCCC
Q psy13668 83 MAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFI---FSF--Q------NLPP 151 (513)
Q Consensus 83 ~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~--~------~~~~ 151 (513)
|--- ....+|+..|++.++++++.++.++++.++.|++.+.. +. +.++++.. .+. . +...
T Consensus 250 ~~dp----rWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (633)
T TIGR00805 250 PTDP----RWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRV-NV----DVHETEKLEKSEDKSRKKNSDITKDFP 320 (633)
T ss_pred CCCc----cHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCccccc-ch----hhhhhhcccccccccchhhhhhHHHHH
Confidence 0000 00004888898888888877766555544444332110 00 00000000 000 0 0001
Q ss_pred CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCccc--c
Q psy13668 152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLTS--P 228 (513)
Q Consensus 152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~--~ 228 (513)
..++++++++.++...+..++....++++.+|+|.|+++.+|+++.+++++.....+ +.++|.+++|+++||++.+ +
T Consensus 321 ~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~ 400 (633)
T TIGR00805 321 KIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKK 400 (633)
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHH
Confidence 235678999999999999999999999999999999999999999999999887766 6789999999999998843 4
Q ss_pred hhhHhhHHHHHH
Q psy13668 229 FDFSASVGPGLG 240 (513)
Q Consensus 229 ~~~~~~~~~~~~ 240 (513)
....+.+...+.
T Consensus 401 ~~~~~~~~~~~~ 412 (633)
T TIGR00805 401 AAYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHHH
Confidence 444444433333
No 98
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.38 E-value=6.7e-12 Score=128.41 Aligned_cols=150 Identities=11% Similarity=-0.051 Sum_probs=106.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
+.+....+..++.....+....++|.++++ +|.|..+.++..+...++..++.+..|++.||++||+....+..+..++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 455566677777777777777788998865 6999999999999999999999999999999999999998888877776
Q ss_pred HHHHHh---cCChhHHHHH-HHHHHHHHHhhhhhhHHHhhcc-cCcchhHHHHHHHHHHHhHHh-hHHHHHHHHhccc
Q psy13668 241 ILAASY---SGCNRLAVTV-SFTLGMGTMGAFLPSLKVNALD-LSPNYAGTLMALVGGIGALSG-TVSPYLVGVLTPN 312 (513)
Q Consensus 241 ~~~l~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~gi~~~~~~i~~-~igp~l~g~l~~~ 312 (513)
.+.... ...+...... ....+.+. +...+.......+ .++++|++++|+.+...+++. ..+|.+.+.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 92 HAAFIVFGLGHANYPLILLFYGIRGLGY-PLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred HHHHHHHhccCccHHHHHHHHHHHHcch-HHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 554321 1222322222 22222222 2222333333334 457889999999999999886 5788888777653
No 99
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.36 E-value=2.8e-10 Score=110.75 Aligned_cols=271 Identities=14% Similarity=0.065 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH-HH--HHHHHHH-----------HHH--H----------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV-FG--AVGLAWF-----------ALW--M---------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~-~g--~~~~~~~-----------~~~--~---------------- 69 (513)
.+.+...+..|..+..+..|++.+|+ |.+.-... .+ .+++... ++. +
T Consensus 50 a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~ 128 (422)
T COG0738 50 ASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPY 128 (422)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchH
Confidence 56778888899999999999999999 76554432 11 1111111 000 0
Q ss_pred ---------------HHHhhhhhHHHHHHHHHHHHHhc------------------cCCchHHHHHHHHHHHHHHHHHHH
Q psy13668 70 ---------------TFATGAQIGNVVSMAVSGLLIRY------------------LGGWTSVFYVFGAVGLAWFALWMT 116 (513)
Q Consensus 70 ---------------~~~~~~~~g~~~~~~~~~~l~~~------------------~~gWr~~f~i~~~~~~~~~~~~~~ 116 (513)
+.....++|.+++|++++.+..+ ...||++|...+...+++.+....
T Consensus 129 v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~ 208 (422)
T COG0738 129 VTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILL 208 (422)
T ss_pred HHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh
Confidence 01111147889999988877662 125888888777766666544432
Q ss_pred hccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcch
Q psy13668 117 FASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSI 196 (513)
Q Consensus 117 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~ 196 (513)
. +.|+.++.. +++ .+.+.....+++++|.++...+..|++-......-+|++.|+.+..|.+.
T Consensus 209 ~--k~p~~~~~~-------~~~--------~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~ 271 (422)
T COG0738 209 S--KLPDLQVAA-------PSL--------GASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNE 271 (422)
T ss_pred c--cCCcCCccc-------ccc--------cccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccH
Confidence 2 223222111 100 00011134788999999999999999999999999999999999889999
Q ss_pred hhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhh
Q psy13668 197 TSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNA 276 (513)
Q Consensus 197 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (513)
.++....+....+.++|++++.++..|+...|.+....++..+.++...+.++ ...+....+...+++..+|......
T Consensus 272 ~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g--~v~~~~l~~ig~F~simfPTIfsla 349 (422)
T COG0738 272 QQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG--VVALYALFLIGLFNSIMFPTIFSLA 349 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999888887777666666666665555 4444444455566777888887777
Q ss_pred cccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 277 LDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 277 ~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
.+..|++... .|..-....+|+++.|.+.|++.|..
T Consensus 350 l~~l~~~ts~-~s~~l~maivGGAiiP~l~G~i~d~~ 385 (422)
T COG0738 350 LKNLGEHTSV-GSGLLVMAIVGGAIIPPLQGVIADMF 385 (422)
T ss_pred HhccCccccc-cceeeeeheecchHHHHHHHHHHHhh
Confidence 7777744333 33444567789999999999888754
No 100
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.34 E-value=2.4e-11 Score=125.45 Aligned_cols=201 Identities=18% Similarity=0.129 Sum_probs=146.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668 95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD 174 (513)
Q Consensus 95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 174 (513)
+|++...+.+++.++..++..+..+|++++.+.. + ++..-+..++.+++||++.......++..
T Consensus 175 ~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~---------~-------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~ 238 (428)
T PF13347_consen 175 GYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQ---------E-------KKISLRDSLRSLFRNRPFRILLLAFFLQW 238 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhhhheeeecccccccc---------c-------cccccccchhhhcccchHHHHHHHHHHHH
Confidence 6999988888888887777776766621111110 0 11111234578899999999988888888
Q ss_pred HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC-ChhHH
Q psy13668 175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG-CNRLA 253 (513)
Q Consensus 175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 253 (513)
..........+.|.++..|.+ ...+.+.....+..+++.++.++++||+|+|+....+..+.+++...+...+ .+.+.
T Consensus 239 ~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWL 317 (428)
T ss_pred hhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHH
Confidence 888877888888888888877 5566777788899999999999999999999999999998888888777766 44444
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhcccCc--------chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 254 VTVSFTLGMGTMGAFLPSLKVNALDLSP--------NYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
..+...+.....+...........|..+ +..|...|+.+....++.++++.+.+.+++.
T Consensus 318 ~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 318 VLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4444444333344444555555555542 4479999999999999999999999988753
No 101
>KOG0569|consensus
Probab=99.32 E-value=5.3e-10 Score=113.91 Aligned_cols=278 Identities=13% Similarity=0.068 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHH--------------HHHhhh------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWM--------------TFATGA------------ 75 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~--------------~~~~~~------------ 75 (513)
-+...+.+.+|.++|..++++++|++ |+|..+++..++...-+.... .+..+.
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmy 140 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMY 140 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45677889999999999999999999 999888865544433221111 111110
Q ss_pred -----------------hhHHHHHHHHHHH-----HHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc----cc--
Q psy13668 76 -----------------QIGNVVSMAVSGL-----LIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES----TH-- 127 (513)
Q Consensus 76 -----------------~~g~~~~~~~~~~-----l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~----~~-- 127 (513)
.++..++-.++.. +......|++.+....+++++... ..++.||+|+.. .+
T Consensus 141 l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~~~ 219 (485)
T KOG0569|consen 141 LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPKYLLIKKGDEE 219 (485)
T ss_pred HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCCHH
Confidence 0122222222211 122223799998887777666554 344668887421 00
Q ss_pred -----hhcccccccccc-----hhhhhcc--CCCCCCchhhhccchhHHHH-----HHHHHHHHHHHHHHHhhHHHHHHH
Q psy13668 128 -----YVAYGTAVMHKS-----NRFIFSF--QNLPPTPWGKIATSAPVIGL-----IIAQIGHDFGLFTIVTDLPKYMKD 190 (513)
Q Consensus 128 -----~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~l~~~~~~~~-----~l~~~~~~~~~~~~~~~lp~~l~~ 190 (513)
...|....++++ .+..++. .+.+..++++++++++.-.- .+...-...+.+....|.-.++++
T Consensus 220 ~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~ 299 (485)
T KOG0569|consen 220 EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT 299 (485)
T ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH
Confidence 000110000000 0111111 12255677888887543322 222222333344556666666666
Q ss_pred hcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC----Ch-hHH----HHHHHHHH
Q psy13668 191 VLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG----CN-RLA----VTVSFTLG 261 (513)
Q Consensus 191 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~----~~-~~~----~~~~~~~~ 261 (513)
.|++..++.......+....+.++.+.++.||.|||+.+..+..++.++.+++.... .. .+. ....+...
T Consensus 300 -aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~ 378 (485)
T KOG0569|consen 300 -AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFI 378 (485)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 499999999999999999999999999999999999999999888887776655321 11 111 11122223
Q ss_pred HHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHH
Q psy13668 262 MGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVS 302 (513)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~ig 302 (513)
..+.....|..+....|++| +.|..+.++......+...+-
T Consensus 379 ~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv 420 (485)
T KOG0569|consen 379 ISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIV 420 (485)
T ss_pred HhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHH
Confidence 33344445566778888886 569999888877765554443
No 102
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.32 E-value=5.8e-11 Score=121.30 Aligned_cols=141 Identities=12% Similarity=0.016 Sum_probs=101.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668 160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL 239 (513)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 239 (513)
++.++..++..+......+.+....+.+-++.+|+|..|.+++.+.+.+...+.++..|++.||+|.|++...+.+...+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 35777777777766666666666666665656999999999999999999999999999999999999999888888887
Q ss_pred HHHHHHhcC----ChhH-HHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHH
Q psy13668 240 GILAASYSG----CNRL-AVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVS 302 (513)
Q Consensus 240 ~~~~l~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~ig 302 (513)
..+.+.+.. ++.. ..+..+..+. .+...+.......+.+| +++|++.|+....+++|..++
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gi--gg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~ 179 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGF--AGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVM 179 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHH--HHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHH
Confidence 777776541 2222 2223333333 35555666666677665 669999999966665555433
No 103
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.32 E-value=1.3e-11 Score=124.66 Aligned_cols=143 Identities=10% Similarity=-0.014 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH-hhHHHHHHHHHHHh
Q psy13668 168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS-ASVGPGLGILAASY 246 (513)
Q Consensus 168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~~l~~ 246 (513)
+..++...+.......+|.|+++.+|.|..+.+++.+...+...+..+..|+++||+|||+.... +.....++.+....
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 34556666667777889999998899999999999999999999999999999999998886554 44444444444444
Q ss_pred cCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHH--HHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 247 SGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTL--MALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~--~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.++.....+..+..+. ..+...+.......+..| +.|+.+ .+......+++..++|.+.+.+.+
T Consensus 84 ~~~~~~l~~~~~~~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 150 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSS-FASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL 150 (375)
T ss_pred cchHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH
Confidence 3332222222222222 223334444455555554 335433 677777888999999999988876
No 104
>PRK09848 glucuronide transporter; Provisional
Probab=99.32 E-value=1.2e-10 Score=120.99 Aligned_cols=158 Identities=9% Similarity=-0.002 Sum_probs=115.0
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668 154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA 233 (513)
Q Consensus 154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 233 (513)
++.+++|++++...+..++....+.....+.|.|+++.+|.+....++......++.+++.++.+++.||+++|+....+
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g 300 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIG 300 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 46789999999988888888888888888888899988888777666655555677888999999999999999998888
Q ss_pred hHHHHHHHHHHHhcCChh-HHHHHHHHHHHHHHhhhhhhHHHhhcccCc--------chhHHHHHHHHHHHhHHhhHHHH
Q psy13668 234 SVGPGLGILAASYSGCNR-LAVTVSFTLGMGTMGAFLPSLKVNALDLSP--------NYAGTLMALVGGIGALSGTVSPY 304 (513)
Q Consensus 234 ~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~gi~~~~~~i~~~igp~ 304 (513)
.++..++.+.+...+... +.......+.....+...+...+...|..+ +..|...|+.++...++.++++.
T Consensus 301 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 301 ALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred HHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 887777766665544322 222222222222233333444445455543 23699999999999999999999
Q ss_pred HHHHhcc
Q psy13668 305 LVGVLTP 311 (513)
Q Consensus 305 l~g~l~~ 311 (513)
+.|.+++
T Consensus 381 i~g~~l~ 387 (448)
T PRK09848 381 IPAFILG 387 (448)
T ss_pred HHHHHHH
Confidence 9887764
No 105
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.32 E-value=2.9e-11 Score=126.33 Aligned_cols=156 Identities=16% Similarity=0.066 Sum_probs=116.4
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS 234 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 234 (513)
...+|++.|..+++...+.+.+.+....-++-+..+ ..-|+...+++.....+..++-.+.+|.+.||+.||+++...-
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~ 82 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ 82 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Confidence 456888999889888888888887777777655554 4667888888888889999999999999999999999988877
Q ss_pred HHHHHHHHHH---HhcCChhHHHHHHHHHHH-HHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 235 VGPGLGILAA---SYSGCNRLAVTVSFTLGM-GTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 235 ~~~~~~~~~l---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
+..++....+ ...+....+.++.+.+.. .+.....|...+...++.| ++...+.++.+...++...+||.+.|.+
T Consensus 83 ~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~L 162 (524)
T PF05977_consen 83 LLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGIL 162 (524)
T ss_pred HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 6555443332 223332333333333333 3355666777888888776 5688999999999999999999999988
Q ss_pred cc
Q psy13668 310 TP 311 (513)
Q Consensus 310 ~~ 311 (513)
+.
T Consensus 163 va 164 (524)
T PF05977_consen 163 VA 164 (524)
T ss_pred HH
Confidence 76
No 106
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.32 E-value=3.1e-11 Score=122.64 Aligned_cols=149 Identities=13% Similarity=0.066 Sum_probs=114.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
+.++...+..+......+.....+|.+. +.+|.|..+.++..+...++..++.+..|++.||++||+.+..+....+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELA-HDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHH-HHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 4566677777777777777778888765 457999999999999999999999999999999999999999998888888
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.+.....++.....+..+..+.+. +...+.......+..+ ++++.+.++......++..++|.+.+.+.+
T Consensus 82 ~~l~~~~~~~~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 82 NAMFTLSSSYLMLAIGRLVSGFPH-GAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 877777665444444433333332 2223344455556664 569999999999999999999998887766
No 107
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.4e-10 Score=114.70 Aligned_cols=288 Identities=16% Similarity=0.094 Sum_probs=196.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
...+.+.+..|......+.....+|..-+| +|.|..++|.+.+.+..+..++.+....+.||+.||+++...+.+..++
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 456778888888889999999999998776 6999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccchhh--hH
Q psy13668 241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLA--KQ 317 (513)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~~--~~ 317 (513)
.++....++-....+.-+..+.. .+..++.......++. |++|+.+.++..+...++-.+|..+..++-|..-. ..
T Consensus 92 n~l~alAp~f~~Ll~aR~~~g~a-~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F 170 (394)
T COG2814 92 NLLSALAPSFAVLLLARALAGLA-HGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF 170 (394)
T ss_pred HHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHH
Confidence 88888877666555555555444 4555565666666665 67899999999999999999999888777663210 00
Q ss_pred HHhh-----hhhhhhhccC-----CCC-C-----------CCccc-----------------------------------
Q psy13668 318 ICNS-----VTYKMRTILS-----GPT-L-----------TSPFD----------------------------------- 340 (513)
Q Consensus 318 l~~~-----~~~~~~~~~~-----~~~-~-----------~~~~~----------------------------------- 340 (513)
+.-. .--.+.+.+| ++. . +....
T Consensus 171 ~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs 250 (394)
T COG2814 171 LAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVS 250 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHH
Confidence 0000 0000001111 000 0 00000
Q ss_pred -----------------------------hhhcccchhhhhhhhccCCchhHHHHHHHhhhcccccccccccccccCCCC
Q psy13668 341 -----------------------------FSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP 391 (513)
Q Consensus 341 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (513)
.......+..++.+.+.+.+.........+..............-..+..|
T Consensus 251 ~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p 330 (394)
T COG2814 251 LVLLAFGIAGFIGNLLGGRLADRGPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAP 330 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC
Confidence 001122233334444444344333333333222222222233333344667
Q ss_pred CccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHhhcccc
Q psy13668 392 NYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGE 468 (513)
Q Consensus 392 ~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~ 468 (513)
+.+..+.++++..-|+|...|..++|.++|.. |+....++.+.+.+++.++.+...+.+
T Consensus 331 ~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~------------------g~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 331 DAADLAGSLNVAAFNLGIALGAALGGLVLDAL------------------GYAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------------chHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999998873 788999999999999998877655544
No 108
>PRK03699 putative transporter; Provisional
Probab=99.30 E-value=2.5e-11 Score=123.80 Aligned_cols=148 Identities=9% Similarity=0.026 Sum_probs=107.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668 162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI 241 (513)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 241 (513)
-++..++..++.......+...+|.+. +.+|+|..+.++..+...++..++.+..|++.||++||+....+.+...++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIA-EYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 345555566665555566666777765 5579999999999999999999999999999999999999888888777777
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 242 LAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
....+.++........+..+.+ .+...+.......+..| ++|+.+.+..+....+++.++|.+.+.+.+
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~-~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVV-SGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA 156 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHh-hHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7766654333222222333322 33334444455556665 569999999988888999999999887764
No 109
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.30 E-value=2.8e-11 Score=123.45 Aligned_cols=132 Identities=11% Similarity=0.013 Sum_probs=104.0
Q ss_pred HHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHH
Q psy13668 178 FTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVS 257 (513)
Q Consensus 178 ~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 257 (513)
+.+...+|.. ++.+|.|..+.++..+.+.++..++.+..|++.||+|||++...+....+++.+...+.++.....+..
T Consensus 26 ~~~~~~lp~i-~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r 104 (393)
T PRK09705 26 TSVGPLLPQL-RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSA 104 (393)
T ss_pred hccchhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHH
Confidence 3444556665 456899999999999999999999999999999999999999999999999999998887665554444
Q ss_pred HHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 258 FTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+..+.+.. ...+.......+.+|++|+.++|........|..+++.+.+.+.+
T Consensus 105 ~l~Gig~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~ 157 (393)
T PRK09705 105 LLGGVGIG-IIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQ 157 (393)
T ss_pred HHHHhHHH-HHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433 333444455666678889999999998888888888888877654
No 110
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.29 E-value=5.5e-11 Score=116.39 Aligned_cols=287 Identities=15% Similarity=0.060 Sum_probs=182.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
++.+...++...+. ..+....-+...+++.+|+|..|.+++...+.+.+.+.++..|.+.||+|.|++...+.+...+-
T Consensus 14 ~~L~~S~~af~v~F-~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP 92 (417)
T COG2223 14 RNLWLSTLAFDVGF-MVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIP 92 (417)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHH
Confidence 44455555444443 33444444445566889999999999999999999999999999999999999999988887777
Q ss_pred HHHHHhcCChh-HHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHH----HHHHHHhcc--c
Q psy13668 241 ILAASYSGCNR-LAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVS----PYLVGVLTP--N 312 (513)
Q Consensus 241 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~ig----p~l~g~l~~--~ 312 (513)
++.+.+....+ ...++.+.+..+..+..+.....+....+| +++|.+.|+.. .+|+|..+. |.+...... .
T Consensus 93 ~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w 171 (417)
T COG2223 93 CLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAW 171 (417)
T ss_pred HHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHH
Confidence 77766654433 245555556667777778777777777775 66999999988 777776554 444433331 0
Q ss_pred hh--------------hhHHHhh-hhhhhhhccCCCC-------------CCC-ccc-----------------------
Q psy13668 313 WL--------------AKQICNS-VTYKMRTILSGPT-------------LTS-PFD----------------------- 340 (513)
Q Consensus 313 ~~--------------~~~l~~~-~~~~~~~~~~~~~-------------~~~-~~~----------------------- 340 (513)
.. ..++..+ .++. |....+.. |.. ..+
T Consensus 172 ~~~~~i~~~~l~v~~v~~~~~~~d~p~~-r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg 250 (417)
T COG2223 172 RNVAGIYVVALAIAAVLAWLGMNDVPEH-RASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFG 250 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhh-hccccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00 0000000 1111 11000000 000 000
Q ss_pred -------------------------------------hhhcccchhhhhhhhccC------CchhHHHHHHHhhhccccc
Q psy13668 341 -------------------------------------FSASVGPGLGILAASYSG------CNRLAVTVSFTLGMGTMGA 377 (513)
Q Consensus 341 -------------------------------------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 377 (513)
.......+++.....+.. .+....+..+.....+.|.
T Consensus 251 ~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~ 330 (417)
T COG2223 251 LSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGL 330 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhcc
Confidence 001233334444443332 1222333333333344455
Q ss_pred ccccccccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHH
Q psy13668 378 FLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLIT 457 (513)
Q Consensus 378 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~ 457 (513)
...+.......+.|++.|.+.|+...++.+|+..-|...|...+.+. ++...|+....+.+++
T Consensus 331 GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg-----------------~~~~~f~~~~~~~~~a 393 (417)
T COG2223 331 GNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG-----------------SYTGAFMLLLAFYLVA 393 (417)
T ss_pred CcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcc-----------------cHHHHHHHHHHHHHHH
Confidence 55555555566778899999999999999999999999998887653 5889999999999999
Q ss_pred HHHHHhhccc
Q psy13668 458 NIIYCFMGSG 467 (513)
Q Consensus 458 ~~~~~~~~~~ 467 (513)
.++.+...++
T Consensus 394 ~v~~~~~y~r 403 (417)
T COG2223 394 LVLTWALYAR 403 (417)
T ss_pred HHHHHHHHHh
Confidence 9887765444
No 111
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.28 E-value=2.6e-11 Score=122.17 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=97.8
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh
Q psy13668 172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR 251 (513)
Q Consensus 172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 251 (513)
+.....+.+....|.+ ++.+|.|..+.+...+...++..++.+..|+++||+|||+....+.+..+++.+.....++..
T Consensus 14 ~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~ 92 (377)
T TIGR00890 14 FTSGYVYTWTLLAPPL-GRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLA 92 (377)
T ss_pred HHhhHHhhhhhHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHH
Confidence 3333455555566554 556899999999999999999999999999999999999999988888888777666654433
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 252 LAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
.........+.+ .+...+.......+..|++|+.+.++.+....++..+++.+.+.+.
T Consensus 93 ~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (377)
T TIGR00890 93 ALYLTYGLASAG-VGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVI 150 (377)
T ss_pred HHHHHHHHHhHH-HHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHH
Confidence 332222222222 2233333444555666888999999999998888877666665554
No 112
>PRK11043 putative transporter; Provisional
Probab=99.27 E-value=3e-10 Score=116.19 Aligned_cols=142 Identities=17% Similarity=0.118 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHhhHHHH--HHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc
Q psy13668 170 QIGHDFGLFTIVTDLPKY--MKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS 247 (513)
Q Consensus 170 ~~~~~~~~~~~~~~lp~~--l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~ 247 (513)
.......+++...+.|.+ +++.+|.|..+.++..+...++..++++..|+++||++||+.+..+.+...++.+...+.
T Consensus 12 ~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 12 AGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh
Confidence 333444445555566655 567789999999999999999999999999999999999999988887777777666665
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 248 GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
++........+..+.+. +...+.......|..| ++++...+..+....++..++|.+.+.+.+.
T Consensus 92 ~~~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 156 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGV-CSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH 156 (401)
T ss_pred cCHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44333333233333322 2223334445555554 5588888888888889999999999887763
No 113
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.26 E-value=4.5e-09 Score=108.80 Aligned_cols=209 Identities=14% Similarity=0.018 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHH
Q psy13668 97 TSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFG 176 (513)
Q Consensus 97 r~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~ 176 (513)
|..+.+.++.-++..+.+++++|++|..++.. +. .+.....-++-...++++-+.|+.....++.++..-+
T Consensus 226 r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~-------~~--~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg 296 (477)
T PF11700_consen 226 RVAFLIVALWWLVFSIPLFLWLPDRPGPRPLP-------SG--SSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDG 296 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC-------cc--hhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 66666666666666777777777776522111 00 0000000000011235556678888888899999999
Q ss_pred HHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCccc--chhhHhhHHHH-HHHHHHH-----h-c
Q psy13668 177 LFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTS--PFDFSASVGPG-LGILAAS-----Y-S 247 (513)
Q Consensus 177 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~--~~~~~~~~~~~-~~~~~l~-----~-~ 247 (513)
..++......|.++.+|++..+...+.....+.+++|.++.|++.||+|.| +++....+... +++..+. . .
T Consensus 297 ~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g 376 (477)
T PF11700_consen 297 VNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFG 376 (477)
T ss_pred HHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 999999999999999999999999999999999999999999999999988 66665554442 2332222 1 1
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccchh
Q psy13668 248 GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPNWL 314 (513)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~ 314 (513)
..+.+....+-.+...+.+...+..-+...++.| ++.+.-.|+..+.+...+.+||.+.|.+.+..-
T Consensus 377 ~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 377 LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2222222222222233455555666666666665 569999999999999999999999999988654
No 114
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.26 E-value=1.9e-10 Score=116.53 Aligned_cols=128 Identities=15% Similarity=0.077 Sum_probs=100.1
Q ss_pred hhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHH
Q psy13668 182 TDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLG 261 (513)
Q Consensus 182 ~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 261 (513)
...|. +++.+|.|..+.+++.+...++..++.+..|+++||+|||+....+.+...++.......++........+..+
T Consensus 15 ~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 93 (399)
T TIGR00893 15 FAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG 93 (399)
T ss_pred HhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 33444 66778999999999999999999999999999999999999998888888877777766654333333333333
Q ss_pred HHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 262 MGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.+ .+...+.......|..| ++|+.+.++.+...+++..++|.+.+.+.+
T Consensus 94 ~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 143 (399)
T TIGR00893 94 AA-EAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI 143 (399)
T ss_pred HH-HHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 33 44455666677777775 679999999999999999999999987665
No 115
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.25 E-value=3e-11 Score=126.14 Aligned_cols=129 Identities=11% Similarity=-0.058 Sum_probs=91.4
Q ss_pred HHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc----CChhHHHH
Q psy13668 180 IVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS----GCNRLAVT 255 (513)
Q Consensus 180 ~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~ 255 (513)
+....|.+ ++.+|.|..+.+++.+...++..++.+..|+++||+|+|+++..+.+..+++...+... ..+....+
T Consensus 48 ~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 126 (467)
T PRK09556 48 FKAAQNDM-ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMI 126 (467)
T ss_pred hhhhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 34446654 55689999999999999999999999999999999999999888877766665554432 22333222
Q ss_pred HHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 256 VSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
..-.+...+.+...+.......+..| ++||.+.|+.+...++|.++++.+...+
T Consensus 127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 127 ALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 22222222233344555556666665 6799999999998888888887776544
No 116
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.24 E-value=1.7e-10 Score=117.66 Aligned_cols=150 Identities=11% Similarity=-0.006 Sum_probs=98.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCcccchhh-HhhHHH
Q psy13668 160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLTSPFDF-SASVGP 237 (513)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~~~~-~~~~~~ 237 (513)
|.+.+...+..++.......+...+|.|+++.+|.|..+.++..+...+ +...+.+.+++ .||++||+... .+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~ 92 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLG 92 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHH
Confidence 6677788888888888888888999999999999999999998765544 55566666666 99999988654 444444
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chh--HHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 238 GLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYA--GTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~--g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+++.......+ +.+..+....+..+......+.......+..+ +.| +...+..+...++|..++|.+.+.+.+
T Consensus 93 ~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~ 168 (393)
T PRK15011 93 VLACTLFAWNR-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM 168 (393)
T ss_pred HHHHHHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 44444443332 22222111111122223334444444455443 323 445578888899999999999998876
No 117
>PRK10504 putative transporter; Provisional
Probab=99.24 E-value=1e-10 Score=122.30 Aligned_cols=150 Identities=18% Similarity=0.131 Sum_probs=114.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
+.+|..++..++.....+.+..++|.+.++ +|.|..+.+...+...++..++.+..|+++||++||+....+.+...++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 457778888888888888888899999876 7999999999999999999999999999999999999988887777777
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 241 ILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.+.....++........+..+.+ .+...+.......+..| ++++.+.|+.+...+++..++|.+.|.+.+.
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~ 160 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVG-GAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY 160 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 66655544333222222222222 33344455555566665 6699999999999999999999999988763
No 118
>PRK09669 putative symporter YagG; Provisional
Probab=99.23 E-value=6.6e-10 Score=115.30 Aligned_cols=198 Identities=11% Similarity=-0.094 Sum_probs=118.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668 95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD 174 (513)
Q Consensus 95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 174 (513)
+|+..+.+.++++.+..+..++..+|++++.+ . ++ ......++.+++|++++......++..
T Consensus 181 g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~-~-------~~----------~~~~~~~~~~~~n~~~~~l~~~~~~~~ 242 (444)
T PRK09669 181 GYFYAMMVMGLLGVVLFFCCFFMTKERYTPEV-D-------NS----------SSVWKDLKLLLGNSQWRIMFIFNVVLL 242 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCeEEecCCCC-c-------CC----------CCHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 78888888777776665555444444321110 0 00 001123467889999888877766655
Q ss_pred HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc-CChhHH
Q psy13668 175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS-GCNRLA 253 (513)
Q Consensus 175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~ 253 (513)
..........+.|.+...+ +....+.+.....+..+++.++.++++||+++|+....+..+..++...+... +.+.+.
T Consensus 243 ~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (444)
T PRK09669 243 TAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWL 321 (444)
T ss_pred HHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHH
Confidence 5554444433333343333 23333445555667788899999999999999998887766555433333333 333332
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhcccCc--------chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 254 VTVSFTLGMGTMGAFLPSLKVNALDLSP--------NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
..+...+.....+...+.......|..+ +..|...|..+....++.++++.+.|.+++
T Consensus 322 ~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 322 IFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332222223334444555555555542 346788899999999999999999988876
No 119
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.20 E-value=4e-09 Score=105.51 Aligned_cols=292 Identities=10% Similarity=0.073 Sum_probs=181.3
Q ss_pred hhhhhhhhh-hhh---hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHH--HH-------------HH
Q psy13668 9 VMLHRLVNE-QQS---NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWF--AL-------------WM 69 (513)
Q Consensus 9 ~~~~~~~~~-r~~---~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~--~~-------------~~ 69 (513)
+..+-|-.+ ++. -.|+..+..++...+.+|+.|.+.||.+-.|...+....+.+..+ +. +.
T Consensus 28 pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~ 107 (412)
T PF01306_consen 28 PFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGA 107 (412)
T ss_dssp HHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHH
T ss_pred HHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555533 332 278899999999999999999999999435555554433322111 00 00
Q ss_pred HH---------Hhhh-------------------------hhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Q psy13668 70 TF---------ATGA-------------------------QIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWM 115 (513)
Q Consensus 70 ~~---------~~~~-------------------------~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~ 115 (513)
+. .++. ++|.+++..++|.+... +=+..|++....+++..++..
T Consensus 108 iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i--~p~~~fwi~s~~~~il~lll~ 185 (412)
T PF01306_consen 108 IIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI--NPNIIFWIASAAAIILLLLLL 185 (412)
T ss_dssp HHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee--CccHHHHHHHHHHHHHHHHHH
Confidence 00 0000 36778888888887764 335667765555544444333
Q ss_pred HhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC--
Q psy13668 116 TFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH-- 193 (513)
Q Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g-- 193 (513)
+..++.+++.+.. +.++. ++++.......+++|+|++|...+......+.++.+-...|.|+++.+.
T Consensus 186 ~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~ 254 (412)
T PF01306_consen 186 LLKPDVPPQAEVA-------DALGA----KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSA 254 (412)
T ss_dssp SS---SSSSS-SS-------TTSSS----------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSH
T ss_pred HcCCcCchhhhhh-------ccccc----CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3333333222111 10000 0000001123678999999999998888888888888889999886543
Q ss_pred -cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhH
Q psy13668 194 -FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSL 272 (513)
Q Consensus 194 -~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (513)
.+....|.+.+...+.-.+......++.+|+|.|+.+.++..++++=.+.....++......+=+..+.-+.....+.+
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445678888888888899999999999999999999988888877777777777766555554444444444444444
Q ss_pred HHhhcccCcchhHHHHHHH-HHHHhHHhhHHHHHHHHhccch
Q psy13668 273 KVNALDLSPNYAGTLMALV-GGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 273 ~~~~~~~~p~~~g~~~gi~-~~~~~i~~~igp~l~g~l~~~~ 313 (513)
--......++..++...+. +...+++..+.+.+.|.+.|+.
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~ 376 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI 376 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc
Confidence 3344444456688888885 5677888889988887777654
No 120
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=5.9e-11 Score=116.04 Aligned_cols=180 Identities=16% Similarity=0.139 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHh
Q psy13668 167 IIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASY 246 (513)
Q Consensus 167 ~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~ 246 (513)
++.+...+..--.+..-.|... +..++|..|.|.+.+...+.-.++..+.|.++||.+.|+.+..+++..+++.+++.+
T Consensus 35 fiGYa~fYl~RknF~~a~p~l~-e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gf 113 (448)
T COG2271 35 FIGYAAFYLTRKNFNLAMPALI-EDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF 113 (448)
T ss_pred HHHHHHHHHHHHhHhhccHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhh
Confidence 3333333333334555565555 456899999999999999999999999999999999999988888777776666554
Q ss_pred cCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccchhhhHHHhhhhhhh
Q psy13668 247 SGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKM 326 (513)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l~~~~~~~~ 326 (513)
.++-..
T Consensus 114 s~s~~~-------------------------------------------------------------------------- 119 (448)
T COG2271 114 SPSLFL-------------------------------------------------------------------------- 119 (448)
T ss_pred hhHHHH--------------------------------------------------------------------------
Confidence 431100
Q ss_pred hhccCCCCCCCccchhhcccchhhhhhhhccCCchhHHHHHHHhhhcccccccc-cccccccCCCCCccchhhhhhhhhh
Q psy13668 327 RTILSGPTLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLP-SLKVNALDLSPNYAGTLMALVGGIG 405 (513)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~ 405 (513)
..++..+..-+.|...| .........+++.||+..++.|+..
T Consensus 120 -------------------------------------~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~sh 162 (448)
T COG2271 120 -------------------------------------FAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSH 162 (448)
T ss_pred -------------------------------------HHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhh
Confidence 00111111111121122 2233334578899999999999999
Q ss_pred hccccccccee--eeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHhhccccccccCCcc
Q psy13668 406 ALSGTVSPYLV--GVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEPL 476 (513)
Q Consensus 406 ~~~~~~~p~~~--g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (513)
++|+.+.|.++ +.+.+.. +||..|++.++++++..++.++..|+++++...++
T Consensus 163 NiGGal~~~~~~la~~~~~~------------------~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ 217 (448)
T COG2271 163 NIGGALAPLVALLAFFAFHG------------------GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP 217 (448)
T ss_pred hcccchHHHHHHHHHHHhcc------------------chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC
Confidence 99999999999 7775543 79999999999999888888888888877665444
No 121
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.19 E-value=4.6e-10 Score=114.45 Aligned_cols=147 Identities=16% Similarity=0.024 Sum_probs=109.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668 160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL 239 (513)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 239 (513)
+++++..++..++...+........+.+.+ .++.+..+.+++.....+...+..++.|+++||++||+++..+.++.++
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLK-ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLL 80 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHH
Confidence 356677777777766665555566666654 5688888999999999999999999999999999999999988887776
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+.+.+....+. ....+ +.....+...|.......|..| ++|+++.|+.+....++..+||.+.|.+.+
T Consensus 81 ~~~~~~~~~~~---~~~r~-l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 81 GCLLMLFGIHP---LLAYG-LVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHHHH---HHHHH-HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65554332221 11122 2223345566666777777775 679999999999999999999999998876
No 122
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.18 E-value=1.7e-09 Score=113.00 Aligned_cols=156 Identities=12% Similarity=0.011 Sum_probs=102.0
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS 234 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 234 (513)
+.+++|++++...+..++.....+......+.|.+...+ +....+.+.....+..+++.++.++++||+|+|+....+.
T Consensus 225 ~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~ 303 (473)
T PRK10429 225 ALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGAS 303 (473)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 456789888888887777777666666666655554433 4555566666667888999999999999999999987777
Q ss_pred HHHHHHHHHHHh---cC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC--------cchhHHHHHHHHHHHhHHhhHH
Q psy13668 235 VGPGLGILAASY---SG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS--------PNYAGTLMALVGGIGALSGTVS 302 (513)
Q Consensus 235 ~~~~~~~~~l~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------p~~~g~~~gi~~~~~~i~~~ig 302 (513)
.+..++.+.+.. .. .+.+..++...+.....+.......+...|.. .+..|...|..+....++.+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~ 383 (473)
T PRK10429 304 IFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFA 383 (473)
T ss_pred HHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHH
Confidence 665544444332 22 22222222222222223333344444444442 2447779999999999999999
Q ss_pred HHHHHHhcc
Q psy13668 303 PYLVGVLTP 311 (513)
Q Consensus 303 p~l~g~l~~ 311 (513)
+.+.|.+++
T Consensus 384 ~~i~g~~l~ 392 (473)
T PRK10429 384 AFFIGVVLG 392 (473)
T ss_pred HHHHHHHHH
Confidence 999988775
No 123
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.18 E-value=3.6e-10 Score=113.91 Aligned_cols=133 Identities=9% Similarity=-0.052 Sum_probs=89.0
Q ss_pred HHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHH
Q psy13668 177 LFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTV 256 (513)
Q Consensus 177 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 256 (513)
+..+...+|.+. +.+|.|..+.+++.+...++..++.+..|+++||+|||++..........+.......++-....+.
T Consensus 7 ~~~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (368)
T TIGR00903 7 WVTFSPVLSLVA-EDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLAC 85 (368)
T ss_pred HHHHHhhHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 344445566664 4579999999999999999999999999999999998887655444333332222221222222333
Q ss_pred HHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 257 SFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
-+..+.+.. ...+.........++++|+++.++.+....+|..+++.+.+.+.+
T Consensus 86 R~l~G~g~~-~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~ 139 (368)
T TIGR00903 86 QLLAALGQP-FLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT 139 (368)
T ss_pred HHHHHhHhH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333322 223333333444556889999999999999999999988888765
No 124
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.17 E-value=2.9e-09 Score=112.05 Aligned_cols=99 Identities=16% Similarity=0.194 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH------HHHH------------------HH----HHHH--
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVG------LAWF------------------AL----WMTF-- 71 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~------~~~~------------------~~----~~~~-- 71 (513)
.+...+.+.++.++..++.|++.|++ |+|+++.+...+. +... .. ....
T Consensus 43 ~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~ 121 (495)
T PRK14995 43 LLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRA 121 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888999999999999999999 9998876422111 1100 00 0000
Q ss_pred ---------------HhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCC
Q psy13668 72 ---------------ATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDP 122 (513)
Q Consensus 72 ---------------~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p 122 (513)
.....+|..++|.+++.+.+.. |||+.|++...++++..++..+++|++|
T Consensus 122 ~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 122 TFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-YWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 0011356788899999999888 9999999877766666555555666543
No 125
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.17 E-value=2.6e-10 Score=116.50 Aligned_cols=151 Identities=12% Similarity=0.007 Sum_probs=102.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668 160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL 239 (513)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 239 (513)
||.+|......++...++..+..++|.|+++.+|+|..+.++..+...+...++++..|+++||+|||+.........++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLV 80 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 57889998899999999999999999999999999999999999999999999999999999999999998776555444
Q ss_pred HHHHHH---hcCC---hhHHHHHHHHHHHH-HHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 240 GILAAS---YSGC---NRLAVTVSFTLGMG-TMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 240 ~~~~l~---~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+..... ..+. ..........+..+ ..+...+.......+.. ++++...|.....+++|..++|.+.|.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 158 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS-RNSNFEYGKARMFGCVGWALCASIAGILFS 158 (396)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh-hhcccccchhhhhcccHHHHHHHHHhhhhc
Confidence 332221 1110 01111111111111 12222233333333332 234456677777788888888888887654
No 126
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.17 E-value=1.3e-09 Score=111.77 Aligned_cols=132 Identities=13% Similarity=-0.028 Sum_probs=94.0
Q ss_pred HHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHH
Q psy13668 178 FTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVS 257 (513)
Q Consensus 178 ~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 257 (513)
..+...+|.+. +.+|.|..+.+...+...++..++.+..|+++||++||++...+.....++.+.....++........
T Consensus 30 ~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 108 (406)
T PRK15402 30 DMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLR 108 (406)
T ss_pred hhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 33444555544 56799999999999999999999999999999999999999888887777777666654433322222
Q ss_pred HHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 258 FTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+..+.+ .+...+.......|..| ++++.+.++.+....++..++|.+.+.+.+
T Consensus 109 ~l~G~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 162 (406)
T PRK15402 109 FLQGIG-LCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH 162 (406)
T ss_pred HHHHhH-hhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222 22333344455555554 568888888888888888999998887765
No 127
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.17 E-value=3.5e-08 Score=100.18 Aligned_cols=161 Identities=12% Similarity=0.053 Sum_probs=118.3
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS 234 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 234 (513)
.+++|+|++....+..++.....-...++.+.|++|.-+++....+.+.+...++-++.-...+++..|++.|+++..+.
T Consensus 201 ~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 201 LKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLAL 280 (400)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 57899999998888888888888888889999999875588888888777777788888889999999999999988888
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHH-----HHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHH-HhHHhhHHHHHHH
Q psy13668 235 VGPGLGILAASYSGCNRLAVTVSF-----TLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGI-GALSGTVSPYLVG 307 (513)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~-~~i~~~igp~l~g 307 (513)
+..++=..+..+..++.+...... ..+..+. ...........+.. ++.|+++-++.+.. ..+|..+|..+.|
T Consensus 281 ~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~-~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG 359 (400)
T PF03825_consen 281 VAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFG-LFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGG 359 (400)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 877776666666633332222111 2233333 33333444445555 46699999998875 5799999999999
Q ss_pred Hhccchhhh
Q psy13668 308 VLTPNWLAK 316 (513)
Q Consensus 308 ~l~~~~~~~ 316 (513)
.+.|....+
T Consensus 360 ~l~~~~g~~ 368 (400)
T PF03825_consen 360 WLYDAFGAR 368 (400)
T ss_pred HHHHHhcch
Confidence 998865443
No 128
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.16 E-value=1.3e-09 Score=111.23 Aligned_cols=138 Identities=14% Similarity=0.030 Sum_probs=103.8
Q ss_pred HHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhH
Q psy13668 173 HDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRL 252 (513)
Q Consensus 173 ~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 252 (513)
.....|.....+|.+.+ .+|.++.+.++..+...++..++++..|.+.||+|||+....+.+..+++.+.....++-..
T Consensus 32 ~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (394)
T PRK10213 32 LIIVEFLPVSLLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSL 110 (394)
T ss_pred HHHHHHHHHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHH
Confidence 33344455556776654 57999999999999999999999999999999999999999999888887777666533333
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 253 AVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.....+..+.+ .+...+.......|..| ++|+.+.++.....+++..++|.+.+.+.+.
T Consensus 111 l~~~r~l~G~~-~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~ 170 (394)
T PRK10213 111 LLIGRACLGLA-LGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL 170 (394)
T ss_pred HHHHHHHHHHh-hHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333333333 33345555666667774 6799999999999999999999999988763
No 129
>KOG3764|consensus
Probab=99.16 E-value=3.5e-10 Score=109.47 Aligned_cols=278 Identities=15% Similarity=0.079 Sum_probs=187.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHH--------H---------------------
Q psy13668 19 QSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALW--------M--------------------- 69 (513)
Q Consensus 19 ~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~--------~--------------------- 69 (513)
...+|+.++...+-+.+..++.|.++||. |.|-.+.+--.+.+.-.+++ .
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 34488999999999999999999999999 98888764222221111110 0
Q ss_pred ----------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccc
Q psy13668 70 ----------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGT 133 (513)
Q Consensus 70 ----------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 133 (513)
.......+|-+++|+.++.+.+.. |-+.+|.+.++++++-..+.++.++....+
T Consensus 184 lAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~--------- 253 (464)
T KOG3764|consen 184 LADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLVIEPTEMD--------- 253 (464)
T ss_pred HHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHheeCccccC---------
Confidence 111111355667788888888887 999999999999988777776665432111
Q ss_pred cccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHH
Q psy13668 134 AVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVT 213 (513)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig 213 (513)
+ +.+.+..++++++++|.++........++...-....-++.|..|....+..+.|+...+..+...+|
T Consensus 254 --~---------~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig 322 (464)
T KOG3764|consen 254 --P---------DSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIG 322 (464)
T ss_pred --c---------cccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhcc
Confidence 0 01112345688999999998888877777777777778899999988866669999999999999999
Q ss_pred HHhhhhhcCCCcccchh--hHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHH--HhhhhhhHHHhhcccC-cc---hhH
Q psy13668 214 YKMRTILSGPRLTSPFD--FSASVGPGLGILAASYSGCNRLAVTVSFTLGMGT--MGAFLPSLKVNALDLS-PN---YAG 285 (513)
Q Consensus 214 ~~~~g~l~dr~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-p~---~~g 285 (513)
..+.|.++||++..++. +.+.+...+++....+.+.-....+..+.++++. .............|.- .+ .-|
T Consensus 323 ~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYG 402 (464)
T KOG3764|consen 323 TNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYG 402 (464)
T ss_pred CchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceee
Confidence 99999999999954443 3344444444444444443333222222222222 1222222222222222 22 479
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHHhccchhhhHH
Q psy13668 286 TLMALVGGIGALSGTVSPYLVGVLTPNWLAKQI 318 (513)
Q Consensus 286 ~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l 318 (513)
.++++......++.++||.+.|.+.+..--+++
T Consensus 403 sVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl 435 (464)
T KOG3764|consen 403 SVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWL 435 (464)
T ss_pred eHHHHHHHHHHHhhhccccccchheeehhHHHH
Confidence 999999999999999999999999987655555
No 130
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.14 E-value=5.4e-10 Score=120.94 Aligned_cols=124 Identities=10% Similarity=0.044 Sum_probs=93.5
Q ss_pred HhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHH
Q psy13668 181 VTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTL 260 (513)
Q Consensus 181 ~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 260 (513)
...+|. +++.++++..+.+++.+...++.+++.+++|+++||+|||+.+..+.++.+++.++..+.++.....+..++.
T Consensus 187 s~ilp~-i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~ 265 (742)
T TIGR01299 187 GFVLPS-AEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLS 265 (742)
T ss_pred HHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 334444 4556799999999999999999999999999999999999999988887777777766654433333333333
Q ss_pred HHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668 261 GMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLV 306 (513)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~ 306 (513)
+++ .+...+.......+..| +.||...++.++...+|.++++.+.
T Consensus 266 G~g-~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la 311 (742)
T TIGR01299 266 GFG-IGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA 311 (742)
T ss_pred HHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 34445677777777776 6699999999998888888877654
No 131
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.13 E-value=3.5e-09 Score=108.71 Aligned_cols=145 Identities=16% Similarity=0.038 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668 164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA 243 (513)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 243 (513)
...++.+++.+.-...+....| .+++.+|.|..+.++..+...++..++.+..|+++||+|||+.+..+.++..++...
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~ 89 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTA 89 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 3344444444444444555555 677889999999999999999999999999999999999999999888888888888
Q ss_pred HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
..+.++.......-+..+.+.. ...+.......+..| ++||.+.|+.+....+|..++|.+.+.+.
T Consensus 90 ~~~~~~~~~l~~~r~l~G~~~~-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 90 TMFATGPESLYLLRILVGIAEA-GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHhcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776554444444444444333 334555556677765 67999999999999999999999988775
No 132
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.13 E-value=1.2e-09 Score=112.74 Aligned_cols=147 Identities=12% Similarity=0.092 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL 242 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 242 (513)
+....+..+......+......|. +++.+|.|..+.++..+...++..++.+..|+++||+|||+....+.+..+++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~ 98 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTG 98 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 344445555444444454445554 5566899999999999999999999999999999999999999999888888877
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.....++.....+..+..+.+ .+...+.......|..| ++|+++.++.+....+|..++|.+.+.+.+
T Consensus 99 ~~~~~~~~~~l~~~r~l~G~g-~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 99 LSGLASGVIMLTLSRFIVGMG-MAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHhHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 766655433333333333333 23344445555566664 669999999999999999999988776655
No 133
>KOG0253|consensus
Probab=99.12 E-value=3.5e-09 Score=101.43 Aligned_cols=280 Identities=11% Similarity=0.072 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH----------------HH-----------------
Q psy13668 23 VILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL----------------WM----------------- 69 (513)
Q Consensus 23 ~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~----------------~~----------------- 69 (513)
++....-..|..++...-|.++|+. |+|+.|-+.....+...++ |.
T Consensus 116 ~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~l 194 (528)
T KOG0253|consen 116 PLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFL 194 (528)
T ss_pred hHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhc
Confidence 3444555667777777889999999 9998887544433333211 00
Q ss_pred ---------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCc-----c--ch-----
Q psy13668 70 ---------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSES-----T--HY----- 128 (513)
Q Consensus 70 ---------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~-----~--~~----- 128 (513)
.......+|.+....+.-..+... ||||.....+.+..+.+. ..++++|+|.-. + ..
T Consensus 195 p~~~r~~~~V~~~~waig~v~ea~law~vm~~~-gwr~~l~~~~~pl~~~a~-f~~w~~ESpRf~~~~G~~~kAletL~k 272 (528)
T KOG0253|consen 195 PSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNF-GWRYLLFTSSTPLMFAAR-FLVWVYESPRFYLAKGDDYKALETLHK 272 (528)
T ss_pred cCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHhHHHHHHH-HHhhcccCcchhhhcCChHHHHHHHHH
Confidence 001111355666666666666777 999988877755544443 344667776321 0 00
Q ss_pred --hcccccc-------------cccchhhhhc---cCCCCCCchhhhcc---chhHHHHHHHHHHHHHHHHHHHhhHHHH
Q psy13668 129 --VAYGTAV-------------MHKSNRFIFS---FQNLPPTPWGKIAT---SAPVIGLIIAQIGHDFGLFTIVTDLPKY 187 (513)
Q Consensus 129 --~~~~~~~-------------~~~~~~~~~~---~~~~~~~~~~~~l~---~~~~~~~~l~~~~~~~~~~~~~~~lp~~ 187 (513)
.-+|-.. .+++.+.++. ..+........++. .+....++...|.....+|+.......+
T Consensus 273 iArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttel 352 (528)
T KOG0253|consen 273 IARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTEL 352 (528)
T ss_pred HHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 0000000 0000000000 00111222333433 1344566666677777777766555444
Q ss_pred HHHhc-----------------C--cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC
Q psy13668 188 MKDVL-----------------H--FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG 248 (513)
Q Consensus 188 l~~~~-----------------g--~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~ 248 (513)
++... + ++...--.=..+..+....|.++.+++.||+|||+.+...++...++++++....
T Consensus 353 fqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~ 432 (528)
T KOG0253|consen 353 FQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK 432 (528)
T ss_pred HhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc
Confidence 44321 0 1111111123345677789999999999999999999999999999988887765
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcch-hHHHHHHHHHHHhHHhhHHHHHH
Q psy13668 249 CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNY-AGTLMALVGGIGALSGTVSPYLV 306 (513)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~gi~~~~~~i~~~igp~l~ 306 (513)
+......+++. +-.+....+...+....|++|.. |+++.|....++.+|+++.|.+.
T Consensus 433 ~rn~~tvllf~-arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 433 TRNAYTVLLFT-ARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred CcchhHHHHHH-HHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 54433333322 23334455556677888888864 99999999999999999999887
No 134
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.12 E-value=3.5e-10 Score=118.02 Aligned_cols=88 Identities=16% Similarity=0.115 Sum_probs=74.0
Q ss_pred ccc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh--cCcchhhhhHHhchhHHHHHHHHHhhhhhcCC-CcccchhhHh
Q psy13668 158 ATS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDV--LHFSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSPFDFSA 233 (513)
Q Consensus 158 l~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~ 233 (513)
+++ +.++.+.+..++...++|+...++|.|+++. +|++..+++.+.....+...++++.+|+++|| +|||+.+..+
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 444 3466777777787899999999999999987 89999999999999999999999999999999 8999998887
Q ss_pred hHHHHHHHHHHH
Q psy13668 234 SVGPGLGILAAS 245 (513)
Q Consensus 234 ~~~~~~~~~~l~ 245 (513)
.++.+++.+++.
T Consensus 86 ~~~~~~g~~~~~ 97 (475)
T TIGR00924 86 GIVLMLGHFMLA 97 (475)
T ss_pred HHHHHHHHHHHH
Confidence 766655554443
No 135
>KOG4686|consensus
Probab=99.12 E-value=4.8e-10 Score=103.38 Aligned_cols=73 Identities=15% Similarity=0.028 Sum_probs=68.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668 160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS 232 (513)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 232 (513)
.+++|...+.+++.+.+.+-+.+..|.++++++|+|+..++.+.+.......+.+++.|.++||.|++.+.+.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~ 335 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVA 335 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHH
Confidence 3899999999999999999999999999999999999999999999999999999999999999999877554
No 136
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.11 E-value=2.9e-10 Score=114.13 Aligned_cols=145 Identities=17% Similarity=0.083 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHH
Q psy13668 166 LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAAS 245 (513)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~ 245 (513)
.....++...........+|.|..+ .+.+..+.+++.+...++..++.+..|+++||+|||+....+.+...++.....
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 3445555555556666677888776 589999999999999999999999999999999999998888777666655544
Q ss_pred hcC----ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 246 YSG----CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 246 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
... .+.+.......+.....+...+.......|..| ++|+.+.++.+....++..++|.+.+.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 153 (365)
T TIGR00900 83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA 153 (365)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 433 123333222222233344555666677777775 679999999999999999999999988765
No 137
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.11 E-value=2.5e-09 Score=108.42 Aligned_cols=138 Identities=14% Similarity=0.058 Sum_probs=102.4
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh
Q psy13668 172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR 251 (513)
Q Consensus 172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 251 (513)
.............|.+ ++.+|.|..+.++..+...++..++.+..|++.||++||+....+.+...++.+.....++..
T Consensus 16 ~~~~~~~~~~~~~p~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 94 (385)
T TIGR00710 16 LGPLGIDMYLPAFPEI-AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIE 94 (385)
T ss_pred HHHHHHHHhcccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence 3334444445556655 455799999999999999999999999999999999999999988888887777776655433
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 252 LAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
......+..+. ..+...+.......|..| ++|+++.++.+....++..++|.+.+.+.+
T Consensus 95 ~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 154 (385)
T TIGR00710 95 TLLVLRFVQAF-GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV 154 (385)
T ss_pred HHHHHHHHHHc-chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322222222 233444555566667665 679999999999999999999999988765
No 138
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.10 E-value=4.2e-09 Score=108.90 Aligned_cols=86 Identities=15% Similarity=0.132 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL 242 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 242 (513)
++...+..++.+...+.+..++|.+.++ +|+|..+.+++.+...++..++++..|++.||+|||+.+..+.+..+++.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~ 103 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINI 103 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHH
Confidence 3344455555555555667788888765 799999999999999999999999999999999999999888888888877
Q ss_pred HHHhcCC
Q psy13668 243 AASYSGC 249 (513)
Q Consensus 243 ~l~~~~~ 249 (513)
+....++
T Consensus 104 ~~~~~~~ 110 (434)
T PRK11663 104 LFGFSSS 110 (434)
T ss_pred HHHHHhH
Confidence 7666543
No 139
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.10 E-value=1.4e-09 Score=111.00 Aligned_cols=147 Identities=12% Similarity=0.062 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL 242 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 242 (513)
+...++..+......+......|.+ ++.+|+|..+.+++.+...++..++.+..|+++||+|||+....+.+..+++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 92 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEV-AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTL 92 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3445555555555555666666654 566899999999999999999999999999999999999999888888777777
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
...+.++........+..+.+ .+...+.......|.. +++|+.+.++.+....+|..++|.+.+.+.+
T Consensus 93 ~~~~~~~~~~l~~~~~l~G~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 93 ACGFAPGYITMFIARLVIGIG-MGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHhccHHHHHHHHHHHHhh-hhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766655433333333333333 3344444555555665 4679999999999999999999998887654
No 140
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.10 E-value=1.5e-07 Score=98.38 Aligned_cols=279 Identities=12% Similarity=0.014 Sum_probs=150.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-ccCchHHHHHHHHHHHH------HH-----HHHH--------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLA------WF-----ALWM-------------------- 69 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~-~~gwr~if~~~g~~~~~------~~-----~~~~-------------------- 69 (513)
.+...+.+.++..++++++|+++|| + |.|.+..+...+..+ .. +...
T Consensus 50 ag~~~~~~~~~~~~~~~~~G~laDr~~-G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a 128 (475)
T TIGR00924 50 AFIIFGAYSALVYLLTSVGWWFGDRVW-GTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVG 128 (475)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhc-chHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHH
Confidence 6677888889999999999999999 7 887765532211110 00 0000
Q ss_pred ----------------HHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhcc----CCCCCccchh
Q psy13668 70 ----------------TFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFAS----SDPSESTHYV 129 (513)
Q Consensus 70 ----------------~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~----~~p~~~~~~~ 129 (513)
+......+|.++++++++.+.+.. |||+.|.+.++..++.. +.+++.+ +.|++.+..
T Consensus 129 ~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~~f~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~- 205 (475)
T TIGR00924 129 KLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHVGFNLAAVGMVIGL-LTFFAGRHMLRDIGSVPDPL- 205 (475)
T ss_pred HhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHH-HHHHHcccccccCCCCCCCc-
Confidence 000111377888999999988887 99999998775444333 3332322 111111101
Q ss_pred cccccccccchhhhh------------------ccC-----------------------CCCCCchhhhccchhHHHHHH
Q psy13668 130 AYGTAVMHKSNRFIF------------------SFQ-----------------------NLPPTPWGKIATSAPVIGLII 168 (513)
Q Consensus 130 ~~~~~~~~~~~~~~~------------------~~~-----------------------~~~~~~~~~~l~~~~~~~~~l 168 (513)
++++++... ..+ ..++....+-.|...+...++
T Consensus 206 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 279 (475)
T TIGR00924 206 ------SGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFL 279 (475)
T ss_pred ------chhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHH
Confidence 111000000 000 000000000011123333344
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhcCcchhh----hhHHhchhHHHHHHHHHhhh----hhcCC-Ccccchh--hHhhHHH
Q psy13668 169 AQIGHDFGLFTIVTDLPKYMKDVLHFSITS----VDLISGWPNRSVIVTYKMRT----ILSGP-RLTSPFD--FSASVGP 237 (513)
Q Consensus 169 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~----~~~~~~~~~~~~~ig~~~~g----~l~dr-~~~~~~~--~~~~~~~ 237 (513)
...+....+.-..+.++.+.++..+.+... .+.+.+...+..++..+... ++.|| .+.+... ..+++..
T Consensus 280 ~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~ 359 (475)
T TIGR00924 280 EAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFC 359 (475)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence 344444444445555677776654443222 55677777776666666544 45555 2223332 5566666
Q ss_pred HHHHHHHHhc--------CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc-hhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668 238 GLGILAASYS--------GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN-YAGTLMALVGGIGALSGTVSPYLVGV 308 (513)
Q Consensus 238 ~~~~~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~gi~~~~~~i~~~igp~l~g~ 308 (513)
+++...+... ..+.++.+....+....-....|.......+..|+ .||+..|+......+|..+++.+...
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~ 439 (475)
T TIGR00924 360 GASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATF 439 (475)
T ss_pred HHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665554421 23344444444443444456666677777777764 69999999999999999998888765
Q ss_pred hc
Q psy13668 309 LT 310 (513)
Q Consensus 309 l~ 310 (513)
..
T Consensus 440 ~~ 441 (475)
T TIGR00924 440 GA 441 (475)
T ss_pred Hh
Confidence 54
No 141
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.08 E-value=6.3e-09 Score=106.13 Aligned_cols=146 Identities=16% Similarity=0.050 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668 164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA 243 (513)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 243 (513)
+......++...........+|.+. +.+|.|..+.++..+...++..++.+..|+++||++||+....+.+...++.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~ 89 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLV 89 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH
Confidence 3344444444444444555566665 457999999999999999999999999999999999999988888877777776
Q ss_pred HHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 244 ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 244 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
....++.....+..+..+.+. +...+.......|.. +++++.+.+..+....++..++|.+.+.+.+
T Consensus 90 ~~~~~~~~~l~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 157 (394)
T PRK11652 90 ALFAHSLTVLIAASAIQGLGT-GVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT 157 (394)
T ss_pred HHHHccHHHHHHHHHHHHhhh-hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665544333333323333222 222333334445555 4679999999999999999999999888765
No 142
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=3.5e-08 Score=97.02 Aligned_cols=161 Identities=17% Similarity=0.089 Sum_probs=123.7
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668 154 WGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA 233 (513)
Q Consensus 154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 233 (513)
++++.+++++....++.++..-+..++......|-.+.+|++..+..++.....+..++|+++.|++.||++.|+++..+
T Consensus 245 ~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~ 324 (438)
T COG2270 245 FKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIG 324 (438)
T ss_pred HHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHH
Confidence 46677778888888888888888899999999999989999999999999999999999999999999999999998888
Q ss_pred hHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhccc-CcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 234 SVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDL-SPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.+...+..+...+........+..+.++.. .+...+..-+...+. +|++.+...|+.+..+...+..||.+.+.+.+.
T Consensus 325 lvi~~~~~~~~~~~~~~~~f~i~gll~g~s-~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~i 403 (438)
T COG2270 325 LVILSIAALYLIFLEGELDFWILGLLVGTS-LGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQI 403 (438)
T ss_pred HHHHHHHHHHHHHccccHHHHHHHHHHHHh-cchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHH
Confidence 776665555544444433222222333333 333344444444444 467899999999999999999999999998875
Q ss_pred hhh
Q psy13668 313 WLA 315 (513)
Q Consensus 313 ~~~ 315 (513)
.-.
T Consensus 404 Tg~ 406 (438)
T COG2270 404 TGS 406 (438)
T ss_pred hcc
Confidence 543
No 143
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.08 E-value=8.8e-08 Score=100.25 Aligned_cols=151 Identities=10% Similarity=-0.012 Sum_probs=83.4
Q ss_pred hhccchhHHHHHHH--HHHHHHHHHHHHhhHHHHHHHhcCcchh----hhhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668 156 KIATSAPVIGLIIA--QIGHDFGLFTIVTDLPKYMKDVLHFSIT----SVDLISGWPNRSVIVTYKMRTILSGPRLTSPF 229 (513)
Q Consensus 156 ~~l~~~~~~~~~l~--~~~~~~~~~~~~~~lp~~l~~~~g~s~~----~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 229 (513)
+.+|++.+....+. ..+....+....+.++.+.++..+.+.. ....+.+...+..++..++.+++.||.++|+.
T Consensus 262 ~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~ 341 (489)
T PRK10207 262 KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK 341 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC
Confidence 34555554443322 2222233333446777787753333210 12223334456666788888999999988863
Q ss_pred -------hhHhhHHHHHHHHHH-----HhcC----ChhHHHHHH-HHHHHHHHhhhhhhHHHhh-cccCcchhHHHHHHH
Q psy13668 230 -------DFSASVGPGLGILAA-----SYSG----CNRLAVTVS-FTLGMGTMGAFLPSLKVNA-LDLSPNYAGTLMALV 291 (513)
Q Consensus 230 -------~~~~~~~~~~~~~~l-----~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~p~~~g~~~gi~ 291 (513)
...++++.+++...+ .+.. .+.++.+.. +..+.+ -++..+...... ...+++.+|.++|+.
T Consensus 342 ~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~G-e~~~~~~g~~~~~~~aP~~~~g~~~g~~ 420 (489)
T PRK10207 342 DLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG-ELFISALGLAMIAALVPQHLMGFILGMW 420 (489)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH-HHHHhHHHHHHHHHhChHHHHHHHHHHH
Confidence 556666655554332 1211 122333333 333333 334444444444 444456799999999
Q ss_pred HHHHhHHhhHHHHHHH
Q psy13668 292 GGIGALSGTVSPYLVG 307 (513)
Q Consensus 292 ~~~~~i~~~igp~l~g 307 (513)
++..++|+.++..+.+
T Consensus 421 ~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 421 FLTQAAAFLLGGYVAT 436 (489)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988876654
No 144
>KOG2615|consensus
Probab=99.07 E-value=5.8e-08 Score=93.77 Aligned_cols=289 Identities=12% Similarity=0.037 Sum_probs=152.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHH-------HHH----hhh-----------
Q psy13668 18 QQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWM-------TFA----TGA----------- 75 (513)
Q Consensus 18 r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~-------~~~----~~~----------- 75 (513)
.....|+..+.+.+++.+..+.-|.++|++ |+|.+.....+-..+...+|. +.. .|.
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHH
Confidence 445588999999999999999999999999 999987653322222222211 111 110
Q ss_pred ---------------------hhHHHHHHHHHHHHHh---ccCCchHHHHHHHHHH--HHHH--HHHHHhccCCCCCccc
Q psy13668 76 ---------------------QIGNVVSMAVSGLLIR---YLGGWTSVFYVFGAVG--LAWF--ALWMTFASSDPSESTH 127 (513)
Q Consensus 76 ---------------------~~g~~~~~~~~~~l~~---~~~gWr~~f~i~~~~~--~~~~--~~~~~~~~~~p~~~~~ 127 (513)
.+|.+++|.+++++.. .. | +.+|.....+. +... ....+++||.-..++.
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~-g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~ 222 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSIS-G-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR 222 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhh-c-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 3678889999998876 22 2 22232212111 1111 1223344543211111
Q ss_pred hhcccccccccchhhhhccCCCCCCchhhhccchhHH------HH-HHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhh
Q psy13668 128 YVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVI------GL-IIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVD 200 (513)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~-~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~ 200 (513)
. .++...++..+...+..+.++..-...++|++.. .. .+-.+.+...+-.+....+.+-.+.+|+++.+.|
T Consensus 223 ~--~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 223 N--DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG 300 (451)
T ss_pred c--ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence 1 0000000000000111111111112234443222 11 1222333333333344444444677899999999
Q ss_pred HHhchhHHHHHHHHHhhhhhcCCCc--ccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcc
Q psy13668 201 LISGWPNRSVIVTYKMRTILSGPRL--TSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALD 278 (513)
Q Consensus 201 ~~~~~~~~~~~ig~~~~g~l~dr~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (513)
-+.+..++.+.+.........||.+ .+-.....+..+.-..+++.................+. .....+........
T Consensus 301 ~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~-~A~~vt~Lt~Lv~~ 379 (451)
T KOG2615|consen 301 KVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFS-TASVVTCLTSLVHK 379 (451)
T ss_pred eeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHH-HHHhhHHHHHHHHh
Confidence 9999988888887777777777765 33333333333333334444333333332222222222 22333344444445
Q ss_pred cC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 279 LS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 279 ~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.. +++||++.|+....+.++-++||.+.|.+...
T Consensus 380 ~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 380 YGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred cCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 55 56799999999999999999999999887753
No 145
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.05 E-value=1.3e-09 Score=113.59 Aligned_cols=110 Identities=11% Similarity=-0.011 Sum_probs=83.7
Q ss_pred hhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh---HHHHHHHHHHHHHHhhhhhhH
Q psy13668 196 ITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR---LAVTVSFTLGMGTMGAFLPSL 272 (513)
Q Consensus 196 ~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 272 (513)
..+.+++.+...++..++.+..|+++||+|||+....+.++..++..+........ ......+..+.+ .+...+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~-~~~~~~~~ 148 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIG-VGIASALV 148 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhh-hhHHHhHH
Confidence 78999999999999999999999999999999999888888877777665443322 222222333332 33444455
Q ss_pred HHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668 273 KVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLV 306 (513)
Q Consensus 273 ~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~ 306 (513)
.....|.. +++|+.+.++.+....+|..++|.+.
T Consensus 149 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 149 PMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 56666776 56799999999999999999999988
No 146
>PRK11462 putative transporter; Provisional
Probab=99.04 E-value=9.4e-08 Score=99.48 Aligned_cols=196 Identities=11% Similarity=-0.004 Sum_probs=106.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668 95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD 174 (513)
Q Consensus 95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 174 (513)
+|+....+.++++++...+.+...+|++++++ . +. . .+..++..++|+++.......++..
T Consensus 181 g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~---------~-~~-~--------~~~~l~~~~~Nk~~~~l~~~~~~~~ 241 (460)
T PRK11462 181 GFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP---------T-TT-S--------MREDLRDIWQNDQWRIVGLLTIFNI 241 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcceeccCCCc---------c-CC-C--------HHHHHHHHhCChHHHHHHHHHHHHH
Confidence 67777777776666655544444444322110 0 00 0 0112356788888876665555444
Q ss_pred HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCCh-hHH
Q psy13668 175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCN-RLA 253 (513)
Q Consensus 175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 253 (513)
............|.+...|.+ ...+.+.....++++++.+++++++||+++|+....+..+..+....+.+.+.. ...
T Consensus 242 ~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (460)
T PRK11462 242 LAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASIT 320 (460)
T ss_pred HHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHH
Confidence 444433333434444344432 334455667778889999999999999999887664444333322223233222 222
Q ss_pred HHHH-HHHHHHHHhhhhhhHHHhhcccCc--------chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 254 VTVS-FTLGMGTMGAFLPSLKVNALDLSP--------NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 254 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.... +..+++ .+...+.......|... +..|...+..+....++.++++.+.|.+++
T Consensus 321 ~~~~~~l~g~~-~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 321 MFVFIFVIGVL-HQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 222222 22333333333333332 235666788888999999999999887775
No 147
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.04 E-value=2.4e-09 Score=110.67 Aligned_cols=152 Identities=13% Similarity=0.087 Sum_probs=118.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-cccchhhHhhHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-LTSPFDFSASVGPGL 239 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 239 (513)
+.++..+...+.....+|+...++|.|+++.+|++..+++.+.........++.+.+|+++||+ |||+....+.+...+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 4577778888888899999999999999999999999999999999999999999999999998 999999988888888
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc---hhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN---YAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
+.+++.............+.+.....+...+.......|.+|+ +|..+.++.+...++|+.++|.+.+.+.+.
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~ 164 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE 164 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7766554322211111111122222344445555667777753 599999999999999999999999998764
No 148
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.03 E-value=8.2e-09 Score=105.19 Aligned_cols=145 Identities=14% Similarity=0.116 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668 165 GLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA 244 (513)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l 244 (513)
...+..+....+.......+|.+.++ +|.|..+.+...+...++..++.+..|+++||+|||+.+..+.+...++....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 34444445555555666677777655 79999999999999999999999999999999999999988888877777776
Q ss_pred HhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 245 SYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
...++........+..+.+ .+...+.......+.. +++|+.+.+..+....++..++|.+.+.+.+
T Consensus 86 ~~~~~~~~~~~~~~l~g~~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~ 152 (392)
T PRK10473 86 SLAETSSLFLAGRFLQGIG-AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML 152 (392)
T ss_pred HHhCcHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6655433333333333322 2333344445555555 5789999999999999999999998887654
No 149
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.02 E-value=7.8e-09 Score=104.63 Aligned_cols=131 Identities=15% Similarity=0.124 Sum_probs=100.1
Q ss_pred HHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHH
Q psy13668 179 TIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSF 258 (513)
Q Consensus 179 ~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 258 (513)
.+...+|.+.++ +|.|..+.+...+...++..++.+..|+++||++||+....+.++.+++...+...++........+
T Consensus 9 ~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 87 (377)
T PRK11102 9 MYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRF 87 (377)
T ss_pred HHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 334567777765 7999999999999999999999999999999999999999888888888777766554333333333
Q ss_pred HHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 259 TLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
..+.+ .+...+.......+..| ++|+++.++.+....++..++|.+.+.+.+
T Consensus 88 l~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 140 (377)
T PRK11102 88 LHGLA-AAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV 140 (377)
T ss_pred HHHHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322 33444445556666665 669999999999999999999999887766
No 150
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.01 E-value=1.9e-09 Score=110.74 Aligned_cols=85 Identities=16% Similarity=0.114 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcc-cchhhHhhHHHHHHHHH
Q psy13668 165 GLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLT-SPFDFSASVGPGLGILA 243 (513)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~~~~~~~~~~~~~~~ 243 (513)
.+.+..++.+..+-.+...++.++++.+|+|..+.|++.+...++..++++..|+++||.++ |+....+.++..++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 34555666666666777889999999999999999999999999999999999999999865 66666666666565555
Q ss_pred HHhcCC
Q psy13668 244 ASYSGC 249 (513)
Q Consensus 244 l~~~~~ 249 (513)
..+.++
T Consensus 86 ~~~~~~ 91 (418)
T TIGR00889 86 AAQVTT 91 (418)
T ss_pred HHHhcC
Confidence 554433
No 151
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.99 E-value=6.3e-09 Score=120.91 Aligned_cols=157 Identities=8% Similarity=-0.102 Sum_probs=107.0
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcch--hhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668 156 KIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSI--TSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA 233 (513)
Q Consensus 156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~--~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 233 (513)
..++++.+...++..++...........+..++...++.+. ...+++.+...++..++.+..|+++||+|||+++..+
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~ 83 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIV 83 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHH
Confidence 45667777777777777666655555555555555555543 3357778888889999999999999999999998877
Q ss_pred hHHHHHHHHHHHhc--CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 234 SVGPGLGILAASYS--GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 234 ~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
.++..+..++.... ..+.+..++...+.....+...+.......+..| ++|+.++|+.+...++|.+++|.+.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~ 163 (1146)
T PRK08633 84 KLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF 163 (1146)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 76554444333222 2222222222222223344555566667777774 67999999999999999999999998886
Q ss_pred cc
Q psy13668 311 PN 312 (513)
Q Consensus 311 ~~ 312 (513)
+.
T Consensus 164 ~~ 165 (1146)
T PRK08633 164 ES 165 (1146)
T ss_pred Hh
Confidence 54
No 152
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.99 E-value=3.8e-09 Score=107.33 Aligned_cols=147 Identities=14% Similarity=-0.013 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHH-HHHHHH
Q psy13668 164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVG-PGLGIL 242 (513)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~ 242 (513)
+...+..+....++.....++|.|+++ +|+|..+.++..+...+...++.++.|.++||.+|+......... ..+...
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~ 85 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 335555666666666677889999976 699999999999999999999999999999999885443222221 112222
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.+....++.+..+....+...+.....+.......+. +++++...|.....+++|..++|.+.|.+.+.
T Consensus 86 ~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~ 154 (382)
T TIGR00902 86 AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW-QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM 154 (382)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH-HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222223333332222222222222334443443332 56789999999999999999999999998874
No 153
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.98 E-value=8.1e-10 Score=110.46 Aligned_cols=75 Identities=11% Similarity=-0.063 Sum_probs=64.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668 158 ATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS 232 (513)
Q Consensus 158 l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 232 (513)
.|++++|......+...+.+-....+.|.|+++..|+|.++.|.+.+...+..++.+++.|.++||.+.||-...
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~ 78 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLW 78 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHH
Confidence 467889988888888888888889999999999889999999999999999999999999999999997665443
No 154
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.98 E-value=6.6e-09 Score=120.52 Aligned_cols=157 Identities=11% Similarity=-0.104 Sum_probs=94.1
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHh----hHHHHHHHhcCcc-hhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchh
Q psy13668 156 KIATSAPVIGLIIAQIGHDFGLFTIVT----DLPKYMKDVLHFS-ITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD 230 (513)
Q Consensus 156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~----~lp~~l~~~~g~s-~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 230 (513)
.+++++++..++...++....-+.... +.+..+.+..+.+ ....++..+...+...+..++.|+++||++||+++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 456666666666655555444332222 2221222222222 23456777788888999999999999999999875
Q ss_pred hHhhHH--HHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 231 FSASVG--PGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 231 ~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
.....+ .......+.+...+.+..++...+...+.+...+...+...+.. +++++.++|+.+...+++.++||.+.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g 165 (1140)
T PRK06814 86 KILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGG 165 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 332221 11112222222223333333322222234445566666666666 567999999999999999999999999
Q ss_pred Hhccc
Q psy13668 308 VLTPN 312 (513)
Q Consensus 308 ~l~~~ 312 (513)
.+.+.
T Consensus 166 ~l~~~ 170 (1140)
T PRK06814 166 LATIS 170 (1140)
T ss_pred HHHhc
Confidence 98763
No 155
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.96 E-value=4.4e-08 Score=99.16 Aligned_cols=242 Identities=14% Similarity=0.088 Sum_probs=168.9
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccCC
Q psy13668 16 NEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGG 95 (513)
Q Consensus 16 ~~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g 95 (513)
+||.+..+.-.....+|..+...+.+++...+++ + -... |
T Consensus 145 ~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~------------------------~---------------~~~~-g 184 (467)
T COG2211 145 QERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG------------------------G---------------DKAL-G 184 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------------------C---------------cchh-h
Confidence 3666666666666666666666666666555421 0 0022 8
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHHH
Q psy13668 96 WTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHDF 175 (513)
Q Consensus 96 Wr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~ 175 (513)
|+..-.+.++++.+..+..++..+|++.+.... ++.++.. .+..+..+++|+++...++..++...
T Consensus 185 ~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~-------~~~~~~~-------~~~~~~~~~~Nrp~~~~l~~~l~~~~ 250 (467)
T COG2211 185 YQGTALVLGVIGVILLLFCFFNVKERVVETQPT-------KTGVKLK-------LKDSFLLIFKNRPLLLLLLMNLLLFI 250 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCccccC-------ccccccc-------HHHHHHHHHccchHHHHHHHHHHHHH
Confidence 888888888888887777777777776533222 1101110 01112357889999888887777777
Q ss_pred HHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHH
Q psy13668 176 GLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVT 255 (513)
Q Consensus 176 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 255 (513)
+...-.+....|.+..+|.+.............+.+++.+....+.+|+|+|+....+.++.+++...+.+.+.+....+
T Consensus 251 ~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~ 330 (467)
T COG2211 251 AFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLI 330 (467)
T ss_pred HHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHH
Confidence 77777777778888778888888888888888888888999999999999999999999998888888887775443333
Q ss_pred HHH-HHHHHHHhhhhhhHHHhhcccC--------cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 256 VSF-TLGMGTMGAFLPSLKVNALDLS--------PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 256 ~~~-~~~~~~~~~~~~~~~~~~~~~~--------p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+.. ++.....+...+..++...|.. .+..|...|..+.+.=++.+++..+.|.+++
T Consensus 331 ~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 331 VVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 4444445555566666666654 2448889999999999999999888877765
No 156
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.96 E-value=1e-09 Score=110.68 Aligned_cols=72 Identities=10% Similarity=-0.082 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668 172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA 244 (513)
Q Consensus 172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l 244 (513)
+.+.....+....|. +++.+|+|..+.+++.+...++..++.+..|+++||++||+....+.++..++.++.
T Consensus 6 ~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 6 AYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF 77 (379)
T ss_pred HHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH
Confidence 334444555556664 566789999999999999999999999999999999999998887666555544433
No 157
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.95 E-value=1.2e-08 Score=107.17 Aligned_cols=158 Identities=10% Similarity=-0.024 Sum_probs=116.8
Q ss_pred hhhccch-hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC-CcccchhhH
Q psy13668 155 GKIATSA-PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSPFDFS 232 (513)
Q Consensus 155 ~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~ 232 (513)
.+.+++| .++..++..++...++|.+..++|.|+++.+|+|..+++..............+++|+++|| +|||+....
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~ 93 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIML 93 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 3456766 48888888899999999999999999999999999988877766665555556789999999 599999999
Q ss_pred hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcc---hhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 233 ASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN---YAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
+.++..++..++...............+...+.+...+.......+.+|+ ++..+.++.+...++|+.++|.+.|.+
T Consensus 94 g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l 173 (500)
T PRK09584 94 GAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWL 173 (500)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 98888888777766543332222222222222344445555566666543 245678888999999999999999999
Q ss_pred ccc
Q psy13668 310 TPN 312 (513)
Q Consensus 310 ~~~ 312 (513)
.+.
T Consensus 174 ~~~ 176 (500)
T PRK09584 174 AAK 176 (500)
T ss_pred HHh
Confidence 774
No 158
>KOG0255|consensus
Probab=98.95 E-value=3.4e-07 Score=97.04 Aligned_cols=285 Identities=15% Similarity=0.097 Sum_probs=162.5
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH-----------HHHHHHhh-------
Q psy13668 13 RLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA-----------LWMTFATG------- 74 (513)
Q Consensus 13 ~~~~~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~-----------~~~~~~~~------- 74 (513)
+++-+......+..+.+.+|..+|+++.|.++|++ |+|.++.+.-.+..+..+ ....+..+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 34434555567778888999999999999999998 999998864333322221 11111111
Q ss_pred -------------------------hhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchh
Q psy13668 75 -------------------------AQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYV 129 (513)
Q Consensus 75 -------------------------~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~ 129 (513)
.-.++.+.++.++++.. +||+.+++..++.....++ +++.+|.|.......
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKG 265 (521)
T ss_pred HHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcC
Confidence 01233444455555544 8999999988888776655 344456653211110
Q ss_pred cccccc---c---------ccch---hhh--hcc----CCCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy13668 130 AYGTAV---M---------HKSN---RFI--FSF----QNLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYM 188 (513)
Q Consensus 130 ~~~~~~---~---------~~~~---~~~--~~~----~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l 188 (513)
+..++. + .+.. +.. .+. ...++..+.++++.+++....+...+.. ..+....+.-.+.
T Consensus 266 ~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~~~~~y~gl~~~ 344 (521)
T KOG0255|consen 266 RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIW-FVFSLVYYGLSLN 344 (521)
T ss_pred chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHH-HHHhHHHHhhhhh
Confidence 000000 0 0000 000 000 0012234566666654332222222211 1122222222222
Q ss_pred HHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhH--HHHHHHHHHHHHHh
Q psy13668 189 KDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRL--AVTVSFTLGMGTMG 266 (513)
Q Consensus 189 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ 266 (513)
.+.+|.+.. .........-..+....+...|+.|||.....+.+...++++.......... ...+...++.++.+
T Consensus 345 ~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
T KOG0255|consen 345 VSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIG 421 (521)
T ss_pred hhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Confidence 222333322 2222233355666667789999999999999999999988888887665443 44445555555555
Q ss_pred hhhhhHHHhhcccCcc-hhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668 267 AFLPSLKVNALDLSPN-YAGTLMALVGGIGALSGTVSPYLV 306 (513)
Q Consensus 267 ~~~~~~~~~~~~~~p~-~~g~~~gi~~~~~~i~~~igp~l~ 306 (513)
...........++.|. .|..+.+..+....++++++|.+.
T Consensus 422 ~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 422 SAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP 462 (521)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555567888888876 499999999999999999999875
No 159
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.95 E-value=2.5e-08 Score=104.60 Aligned_cols=152 Identities=13% Similarity=-0.068 Sum_probs=106.8
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-----cccch-h
Q psy13668 157 IATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-----LTSPF-D 230 (513)
Q Consensus 157 ~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~-~ 230 (513)
..++++.+..+...+......+.....+|.++++. |.|..+.+........ .+..++.|.++||+ |||+. +
T Consensus 8 ~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~l 84 (491)
T PRK11010 8 IFQQPNSAILLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFFSLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWL 84 (491)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCCchHHH
Confidence 34556677777777777788888888899999875 9999998886322222 26889999999998 88875 5
Q ss_pred hHhhHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 231 FSASVGPGLGILAASYSGC--NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
..+.+..+++...+.+... +.........+...+.....+.......|..| ++|+.+.++......+|..+++.+.+
T Consensus 85 l~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~ 164 (491)
T PRK11010 85 LATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLAL 164 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666666555432 22222222222233344555556677777775 77999999999999999999998888
Q ss_pred Hhcc
Q psy13668 308 VLTP 311 (513)
Q Consensus 308 ~l~~ 311 (513)
.+.+
T Consensus 165 ~l~~ 168 (491)
T PRK11010 165 WLAD 168 (491)
T ss_pred HHHh
Confidence 8776
No 160
>TIGR00895 2A0115 benzoate transport.
Probab=98.93 E-value=1.3e-09 Score=110.68 Aligned_cols=72 Identities=4% Similarity=-0.151 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668 169 AQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI 241 (513)
Q Consensus 169 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 241 (513)
..+.............|.+. +.+|.+..+.+++.+...++..++.+..|+++||++||+....+.++..++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 96 (398)
T TIGR00895 25 IMLMDGYDLAAMGFAAPAIS-AEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFT 96 (398)
T ss_pred HHHHHHHHHHHHHhhHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 33333333444455566555 4579999999999999999999999999999999999998777555444433
No 161
>TIGR00898 2A0119 cation transport protein.
Probab=98.93 E-value=5.2e-09 Score=110.43 Aligned_cols=121 Identities=11% Similarity=0.019 Sum_probs=91.3
Q ss_pred HHhcCcc---hhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q psy13668 189 KDVLHFS---ITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTM 265 (513)
Q Consensus 189 ~~~~g~s---~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 265 (513)
++.++++ ..+.++..+...++..++.++.|+++||+|||+....+.++..++.+...+.++-....+..+.. ....
T Consensus 116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~-G~~~ 194 (505)
T TIGR00898 116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV-GMGI 194 (505)
T ss_pred EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH-Hhhc
Confidence 4557888 88899999999999999999999999999999999988888888777776655433333333333 3334
Q ss_pred hhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 266 GAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 266 ~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
+...+.......|..| ++|+.+.++......+|..++|.+.+.+.
T Consensus 195 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 240 (505)
T TIGR00898 195 GGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP 240 (505)
T ss_pred cchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4446666667777775 66999999998888888888887765543
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.93 E-value=4e-09 Score=109.20 Aligned_cols=80 Identities=10% Similarity=0.023 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668 162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI 241 (513)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 241 (513)
.++...+.....+...+.+..+.| ++++ .|+|..+.++..+...++..++.+..|+++||++||+....+.+..+++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~ 105 (438)
T TIGR00712 28 VFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVM 105 (438)
T ss_pred HHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHH
Confidence 334444444444433444455565 4556 49999999999999999999999999999999999998777655555544
Q ss_pred HH
Q psy13668 242 LA 243 (513)
Q Consensus 242 ~~ 243 (513)
+.
T Consensus 106 ~~ 107 (438)
T TIGR00712 106 LL 107 (438)
T ss_pred HH
Confidence 33
No 163
>PRK10133 L-fucose transporter; Provisional
Probab=98.93 E-value=4e-08 Score=101.62 Aligned_cols=146 Identities=12% Similarity=-0.015 Sum_probs=104.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668 162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI 241 (513)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 241 (513)
++....+..+............+|.+ ++.+|.|..+.++..+...++..++.+..|++.||+|||+.+..+....+++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~ 105 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGA 105 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 44555555566566666666778776 78899999999999999999999999999999999999999999998888888
Q ss_pred HHHHh--cCChhHH-HHHHHHHHHHHHhhhhhhHHHhhcccCcch-hHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 242 LAASY--SGCNRLA-VTVSFTLGMGTMGAFLPSLKVNALDLSPNY-AGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 242 ~~l~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
++... ..++... ....+..+.+. +...+.......+..|++ ++...+..+....+|..++|.+.+.+
T Consensus 106 ~l~~~~~~a~~~~~ll~~r~l~G~g~-g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 106 ALFWPAAEIMNYTLFLVGLFIIAAGL-GCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHH-HHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66532 2233332 23333333333 333333344444666655 55578888999999999998876643
No 164
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.93 E-value=5.4e-08 Score=101.62 Aligned_cols=70 Identities=30% Similarity=0.632 Sum_probs=59.8
Q ss_pred echhhhhhhhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccCchHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy13668 6 INNVMLHRLVN--EQQSNTVILMAGAQIGNVVSMAVSGLLIRY-LGGWTSVFYVFGAVGLAWFALWMTFATGAQ 76 (513)
Q Consensus 6 ~~~~~~~~~~~--~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~-~~gwr~if~~~g~~~~~~~~~~~~~~~~~~ 76 (513)
.....+.+|+| ||+++.++..++..+|.++++++++.+.+. . |||+.|++.+++++++.+.+..+..+.|
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~-gw~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG-GWPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 34567889994 788889999999999999999999999998 6 9999999999998888887777665543
No 165
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.92 E-value=1.7e-08 Score=105.82 Aligned_cols=97 Identities=12% Similarity=0.223 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH----------------------------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL---------------------------------- 67 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~---------------------------------- 67 (513)
.+...+...++.+++.++.|++.||+ |.|.++.+...+..+....
T Consensus 39 ~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~ 117 (485)
T TIGR00711 39 VQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLN 117 (485)
T ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 56788889999999999999999999 8888766422111110000
Q ss_pred ----------HHHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccC
Q psy13668 68 ----------WMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASS 120 (513)
Q Consensus 68 ----------~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~ 120 (513)
..+......+|..+++.+++.+.+.. +||+.|++.+.++++..++..++.++
T Consensus 118 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 118 IYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred HCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-CceehhhhhhHHHHHHHHHHHHHcCC
Confidence 00111111356677788888888887 99999998877776665555555554
No 166
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.90 E-value=3.2e-08 Score=101.62 Aligned_cols=126 Identities=11% Similarity=0.004 Sum_probs=95.8
Q ss_pred HHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHH
Q psy13668 184 LPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMG 263 (513)
Q Consensus 184 lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 263 (513)
+|. +.+.++.+..+.+...+.+.++..++.+..|.++||+|||+.+..+.++..++.+.....++........+..+.+
T Consensus 39 l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~ 117 (413)
T PRK15403 39 IIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTS 117 (413)
T ss_pred HHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 444 4566899999999999999999999999999999999999999988888888777776665544444443444443
Q ss_pred HHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 264 TMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 264 ~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.. ...+.......|..| ++++++.++.+....++..++|.+.+.+.+
T Consensus 118 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~ 165 (413)
T PRK15403 118 IC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH 165 (413)
T ss_pred HH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 223333455666665 568999999999999999999999887765
No 167
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.90 E-value=2.2e-08 Score=100.87 Aligned_cols=148 Identities=14% Similarity=0.043 Sum_probs=113.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668 162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI 241 (513)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 241 (513)
.++..++..+......+.+..+.|.++++.+|+|..+.+++.+...++..++.+..|+++||+|||+....+.+...++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 46777788888888888889999988888999999999999999999999999999999999999999999888888887
Q ss_pred HHHHhcC-ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 242 LAASYSG-CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 242 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+...+.+ +.....+..+..+.+ .+ ..........+.. +++|+.+.++.....++|..+++.+.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~-~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIA-GG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHh-ch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 7776655 333233333333333 22 2333444555665 4679999999998888887777777665543
No 168
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.90 E-value=3.6e-07 Score=94.26 Aligned_cols=280 Identities=13% Similarity=0.081 Sum_probs=159.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh----ccCchHHHHHHHHHHHHHHHHHHHH------------------------
Q psy13668 20 SNTVILMAGAQIGNVVSMAVSGLLIRY----LGGWTSVFYVFGAVGLAWFALWMTF------------------------ 71 (513)
Q Consensus 20 ~~~~i~~~~~~lG~~i~~~i~g~L~~~----~~gwr~if~~~g~~~~~~~~~~~~~------------------------ 71 (513)
...+.......+..++..|+.|+++|| + |+|..|...+.+..+..+....+
T Consensus 39 ~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~ 117 (477)
T TIGR01301 39 AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVF 117 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHH
Confidence 345666667778888889999999995 8 99999886544333222111100
Q ss_pred -----Hhh-----------------------------------hhhHHHHHHHHHHHH--Hhcc------------CCch
Q psy13668 72 -----ATG-----------------------------------AQIGNVVSMAVSGLL--IRYL------------GGWT 97 (513)
Q Consensus 72 -----~~~-----------------------------------~~~g~~~~~~~~~~l--~~~~------------~gWr 97 (513)
..+ ..+|.++++.+++.. .+.. .+-|
T Consensus 118 ~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (477)
T TIGR01301 118 VVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLK 197 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHH
Confidence 000 024556666665543 1110 0347
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccc-----hhHHHHHHHHHH
Q psy13668 98 SVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATS-----APVIGLIIAQIG 172 (513)
Q Consensus 98 ~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~l~~~~ 172 (513)
..|++.+++.++..+...+..+|.|...+.. . .+++.+ +..+......+++++++ +.++.+++..++
T Consensus 198 ~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~-~-----~~~~~~--~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqff 269 (477)
T TIGR01301 198 SCFLIDIILLAILTYIALSAVKENPLIGSDD-F-----INSEAA--PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCL 269 (477)
T ss_pred HHHHHHHHHHHHHHHHHeeeeeccCCCcccc-c-----hhhhcc--cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 7888777766666666666677754321110 0 000000 00000111123334332 678999999999
Q ss_pred HHHHHHHHHhhHHHHHHH-hcCcchh------hh---h-HHhchhHHHHHHHHHhhhhhcCCCcc-cchhhHhhHHHHHH
Q psy13668 173 HDFGLFTIVTDLPKYMKD-VLHFSIT------SV---D-LISGWPNRSVIVTYKMRTILSGPRLT-SPFDFSASVGPGLG 240 (513)
Q Consensus 173 ~~~~~~~~~~~lp~~l~~-~~g~s~~------~~---~-~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~~~~~~~~~~~~ 240 (513)
.-.+++.+..|...|..+ .++-++. +. | +......+...+.+++--++.+|+++ |+....+.++.+++
T Consensus 270 sW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~ 349 (477)
T TIGR01301 270 NWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAIC 349 (477)
T ss_pred HHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 999999999999888764 4553321 11 2 23334445555666677778888884 67768887777777
Q ss_pred HHHHHhcCC------h--------------hHHHHHHHH-HHHHHHhhhhhhHHHhhcccCc--chhHHHHHHHHHHHhH
Q psy13668 241 ILAASYSGC------N--------------RLAVTVSFT-LGMGTMGAFLPSLKVNALDLSP--NYAGTLMALVGGIGAL 297 (513)
Q Consensus 241 ~~~l~~~~~------~--------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~gi~~~~~~i 297 (513)
+....+... . ....+..+. ++.........++.....+..+ +..|.-+|+.|.+..+
T Consensus 350 l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~l 429 (477)
T TIGR01301 350 LAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVI 429 (477)
T ss_pred HHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHH
Confidence 766654321 0 122222222 2222222333333444444442 4579999999999999
Q ss_pred HhhHHHHHHHH
Q psy13668 298 SGTVSPYLVGV 308 (513)
Q Consensus 298 ~~~igp~l~g~ 308 (513)
++.+.....|.
T Consensus 430 pQii~sl~~g~ 440 (477)
T TIGR01301 430 PQIIVSLGSGP 440 (477)
T ss_pred HHHHHHHHHHH
Confidence 99998887766
No 169
>KOG0254|consensus
Probab=98.89 E-value=1.4e-07 Score=99.66 Aligned_cols=272 Identities=13% Similarity=0.076 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHH------HHHHh-----hh---------------
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALW------MTFAT-----GA--------------- 75 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~------~~~~~-----~~--------------- 75 (513)
.+.+.+...+|.+++.++.|.++|++ |+|..+.+..+.-.+..++. ..+.. +.
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 47889999999999999999999999 99988775432222211110 00000 00
Q ss_pred ------------------hhHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchh-------
Q psy13668 76 ------------------QIGNVVSMAVSGLLIRYL-GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYV------- 129 (513)
Q Consensus 76 ------------------~~g~~~~~~~~~~l~~~~-~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~------- 129 (513)
.+|..++. +.+....+. .+||..+.+..+.+++..+. .++.||.|...-+..
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~~-~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~ 247 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLGY-CINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKR 247 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHHH-HHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHH
Confidence 12222221 222222211 17999998888888887777 777788774321110
Q ss_pred --c--cc--ccccccchhhhh-----ccCC-CCCCchhhhcc----chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC
Q psy13668 130 --A--YG--TAVMHKSNRFIF-----SFQN-LPPTPWGKIAT----SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH 193 (513)
Q Consensus 130 --~--~~--~~~~~~~~~~~~-----~~~~-~~~~~~~~~l~----~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g 193 (513)
. ++ .+..+.+.+..+ +... ..+..+.++++ ++.++...+..+.+..+......|.+.+++.. |
T Consensus 248 ~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g 326 (513)
T KOG0254|consen 248 SLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-G 326 (513)
T ss_pred HHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-C
Confidence 0 00 000000000000 0000 01111233332 23344455555555555566777888887765 6
Q ss_pred cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC----C-------hhHHHHH-HHHHH
Q psy13668 194 FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG----C-------NRLAVTV-SFTLG 261 (513)
Q Consensus 194 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~----~-------~~~~~~~-~~~~~ 261 (513)
.+... ........+.+.++..+..++.||.|||+.+..+...+.++.+++.... . ..+..+. .+...
T Consensus 327 ~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 405 (513)
T KOG0254|consen 327 LKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFI 405 (513)
T ss_pred CCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHH
Confidence 55443 5556667778888888889999999999999999998888877665321 1 1122222 22222
Q ss_pred HHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHH
Q psy13668 262 MGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALS 298 (513)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~ 298 (513)
..+.....+..+....|.+| +.|+.+.++........
T Consensus 406 ~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 406 FSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 33344444555677788887 45999998877775444
No 170
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.89 E-value=8.6e-08 Score=100.77 Aligned_cols=140 Identities=9% Similarity=-0.051 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh-hhH-----HhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHH
Q psy13668 165 GLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS-VDL-----ISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPG 238 (513)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~-~~~-----~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~ 238 (513)
...+..++-.+-+..+.... .++.+.++.+..+ ... ..+...++..+|.++.|+++||+|||+.+..+.++.+
T Consensus 20 ~~~~g~~~~~~d~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~ 98 (490)
T PRK10642 20 AASLGNAMEWFDFGVYGFVA-YALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMS 98 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 33444444443333333344 4555555433322 111 1355667888999999999999999999999999999
Q ss_pred HHHHHHHhcCChhH--------HHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668 239 LGILAASYSGCNRL--------AVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLV 306 (513)
Q Consensus 239 ~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~ 306 (513)
++.++..+.++-.. ..+.-+..++ ..+...+.......|..| ++||...++......+|..+++.+.
T Consensus 99 i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~-g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 99 ISTFCIGLIPSYATIGIWAPILLLLCKMAQGF-SVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-HhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99888887765432 1112222233 234455566667777775 6799999988877777766666443
No 171
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.87 E-value=2.1e-08 Score=103.62 Aligned_cols=136 Identities=13% Similarity=-0.018 Sum_probs=91.1
Q ss_pred HHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Cccc-chhhHhhHHHHHHHHHHHhcC
Q psy13668 174 DFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLTS-PFDFSASVGPGLGILAASYSG 248 (513)
Q Consensus 174 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~-~~~~~~~~~~~~~~~~l~~~~ 248 (513)
+.....+..+++.|+.+.+|+|+.+.+.+.+...+...+..++.|+++|| +||| +.+..+....+++..++...+
T Consensus 12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~ 91 (437)
T TIGR00792 12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP 91 (437)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC
Confidence 34445566789999999999999999999999999999999999999998 4554 456666666666666665544
Q ss_pred Chh----HHHHHH-HHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 249 CNR----LAVTVS-FTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 249 ~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
... ...... ..+...........+.+...+.. +++|+...+..+....+|+.+++.+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l 159 (437)
T TIGR00792 92 DFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPL 159 (437)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 111111 11111122233344555556654 56799999988888888776665554443
No 172
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.87 E-value=1.5e-08 Score=105.33 Aligned_cols=62 Identities=11% Similarity=0.013 Sum_probs=50.5
Q ss_pred HhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHH
Q psy13668 181 VTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAA 244 (513)
Q Consensus 181 ~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l 244 (513)
....| ++++. |+|..+.++..+...++..++++..|+++||+|||+++..+.++.+++.+.+
T Consensus 49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~ 110 (452)
T PRK11273 49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM 110 (452)
T ss_pred HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHH
Confidence 34555 56666 9999999999999999999999999999999999998877666555544433
No 173
>PRK09952 shikimate transporter; Provisional
Probab=98.86 E-value=5.8e-08 Score=100.53 Aligned_cols=143 Identities=10% Similarity=-0.036 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhc--CcchhhhhHHh-----chhHHHHHHHHHhhhhhcCCCcccchhhHhhHH
Q psy13668 164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVL--HFSITSVDLIS-----GWPNRSVIVTYKMRTILSGPRLTSPFDFSASVG 236 (513)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~--g~s~~~~~~~~-----~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 236 (513)
....+..++-..-...+....|.+..+.+ +.++.+ +... ....++..+|.++.|+++||+|||+.+..+.+.
T Consensus 25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~ 103 (438)
T PRK09952 25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWM 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHH
Confidence 34444444444444444445555555544 566553 3332 234455678888999999999999999999999
Q ss_pred HHHHHHHHHhcCChhH--------HHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 237 PGLGILAASYSGCNRL--------AVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 237 ~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
.+++.++..+.++-.. ..+.-+..+.+ .+...+.......|..| ++||...+..+....+|..+++.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~-~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~ 182 (438)
T PRK09952 104 MGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFA-VGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVS 182 (438)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhh-hcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877765431 11111222322 33334444566667665 67999998888888888777765544
Q ss_pred H
Q psy13668 308 V 308 (513)
Q Consensus 308 ~ 308 (513)
.
T Consensus 183 ~ 183 (438)
T PRK09952 183 L 183 (438)
T ss_pred H
Confidence 3
No 174
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.86 E-value=9.1e-08 Score=99.71 Aligned_cols=224 Identities=11% Similarity=-0.066 Sum_probs=134.6
Q ss_pred hHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCC-Cccchhcccccccccc--------hhhhhccC
Q psy13668 77 IGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPS-ESTHYVAYGTAVMHKS--------NRFIFSFQ 147 (513)
Q Consensus 77 ~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~--------~~~~~~~~ 147 (513)
.|.++++.+++.+.+.. +||..|++.+.+.++..+ ..++.+|++. ..+.. .+++ .... +..
T Consensus 169 ~G~~vg~~l~G~l~~~~-~~~~~f~~~a~l~ll~~~-~~~~~~E~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~ 238 (468)
T TIGR00788 169 TGGLISSLLGGPLLDKT-LTRILFLITAALLLLQLF-VSNLSKERRAFVRPRI-------GTYLEMNMALLTLGVL-ANV 238 (468)
T ss_pred HHHHHHHHHHHHHHHhc-CcchHHHHHHHHHHHHHH-HHHhcccccccccccc-------cccchhhhhhhhhhHH-HHH
Confidence 57788888888888887 999999988777766633 3345565431 11111 0000 0000 000
Q ss_pred CCCCCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCccc
Q psy13668 148 NLPPTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTS 227 (513)
Q Consensus 148 ~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 227 (513)
+......++.+++|.++...+..++.+....+.....-.+.++.+|+++.+.|+......++.+++....+++.+|++.|
T Consensus 239 ~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r 318 (468)
T TIGR00788 239 KVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR 318 (468)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH
Confidence 00001224557778877655544441111111110000133456899999999999999999999999999999999999
Q ss_pred chhhHhhHHHHHHHHHHHhcC---------ChhHHHHH-HHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHh
Q psy13668 228 PFDFSASVGPGLGILAASYSG---------CNRLAVTV-SFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGA 296 (513)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~ 296 (513)
+....+.+..+++.+...... .+...... ......+ .+...........+.. ++++|+..|+.+.+.+
T Consensus 319 ~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~ 397 (468)
T TIGR00788 319 LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVL-AQLKFMPFLVLLARLCPSGCESSVFALLASILH 397 (468)
T ss_pred HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHH-HHHHHccHHHHHHHhCCCCceehHHHHHHHHHH
Confidence 988888777776654432111 11111111 1222222 3333334455555565 5679999999999999
Q ss_pred HHhhHHHHHHHHhcc
Q psy13668 297 LSGTVSPYLVGVLTP 311 (513)
Q Consensus 297 i~~~igp~l~g~l~~ 311 (513)
++..+++.+.|.+.+
T Consensus 398 lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 398 LGSSVSGFLGVLLME 412 (468)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999987776664
No 175
>KOG0252|consensus
Probab=98.85 E-value=6.9e-08 Score=95.49 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=50.9
Q ss_pred CCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHhhc
Q psy13668 389 LSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMG 465 (513)
Q Consensus 389 ~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~ 465 (513)
.|.+.||+..|+....+.+|++++......+.+.... ...+.+.+|++.+++++++.+..+++-
T Consensus 435 FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp-------------~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 435 FPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYP-------------PNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred chHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCC-------------ccccchHHHHHHHHHHHHhHheeEEee
Confidence 3456799999999999999999999888888773211 112788999999999999998876654
No 176
>KOG3626|consensus
Probab=98.84 E-value=2e-07 Score=98.47 Aligned_cols=181 Identities=15% Similarity=0.187 Sum_probs=116.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccCCchH
Q psy13668 19 QSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTS 98 (513)
Q Consensus 19 ~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~ 98 (513)
+..+|+.++...+|+++|.++++.+...+.++. . .+.+ +.+-.-.| ...|..
T Consensus 272 plYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~--------------------~--~~~~--it~~DPrW----IGAWWl 323 (735)
T KOG3626|consen 272 PLYLGILYSMAILGPAIGFLLGSFCLKLYVDFG--------------------L--SPIG--ITPTDPRW----IGAWWL 323 (735)
T ss_pred cHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccc--------------------c--CCCC--CCCCCcch----hhHHHH
Confidence 344999999999999999999998877652321 0 0000 00000000 013666
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccC------CCCCCchhhhccchhHHHHHHHHHH
Q psy13668 99 VFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQ------NLPPTPWGKIATSAPVIGLIIAQIG 172 (513)
Q Consensus 99 ~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~l~~~~ 172 (513)
-|++.|.+.++..+..+++-++.|++.++......+..+++.+...+.. ++-+...+++++|+.+....+...+
T Consensus 324 GFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~ 403 (735)
T KOG3626|consen 324 GFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVI 403 (735)
T ss_pred HHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 6777888887777777777556554332110000000000100000000 0112345788999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCccc
Q psy13668 173 HDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLTS 227 (513)
Q Consensus 173 ~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~ 227 (513)
....+.++.+++|.|++..++.++..+.++.....+ +..+|.+++|++..|+.-+
T Consensus 404 ~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 404 ESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 999999999999999999999999999988855554 6678999999999997643
No 177
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.83 E-value=3.8e-08 Score=103.06 Aligned_cols=115 Identities=10% Similarity=-0.050 Sum_probs=82.7
Q ss_pred CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC--------Chh--HHHH-HHHHHH
Q psy13668 193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG--------CNR--LAVT-VSFTLG 261 (513)
Q Consensus 193 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~--~~~~-~~~~~~ 261 (513)
+.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+...... .+. ...+ ..=.+.
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence 78888999999999999999999999999999999999988887777665554321 111 1111 111222
Q ss_pred HHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 262 MGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
....+...+.......|..| ++||.+.++.+....+|..+++.+.+
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~ 177 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNY 177 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22344555556666777775 67999999999888888887765544
No 178
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.82 E-value=8.6e-08 Score=100.28 Aligned_cols=139 Identities=14% Similarity=0.059 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Ccc-cchhhHhhHHHHHHHH
Q psy13668 168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLT-SPFDFSASVGPGLGIL 242 (513)
Q Consensus 168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~-~~~~~~~~~~~~~~~~ 242 (513)
+..+..+.....+..|++.|+.|.+|+|+...+.+....-+...+..++.|+++|| +|| |+++..+....+++..
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 34444455566677889999999999999999999999999999999999999995 577 5566667666666665
Q ss_pred HHHhcCCh--hH---HHHHHHHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHHH
Q psy13668 243 AASYSGCN--RL---AVTVSFTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYLV 306 (513)
Q Consensus 243 ~l~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l~ 306 (513)
++...+.. .. ...+...+...+......++.+...++. +++|...++.-....++++.+.+.+.
T Consensus 93 llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~ 163 (473)
T PRK10429 93 LLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFT 163 (473)
T ss_pred HHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443321 11 1111112222233344455666777776 56788888886666676655554443
No 179
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.81 E-value=3.3e-08 Score=100.40 Aligned_cols=141 Identities=12% Similarity=-0.004 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH-hhHHHHHHHHHHHhcC
Q psy13668 170 QIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS-ASVGPGLGILAASYSG 248 (513)
Q Consensus 170 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~~l~~~~ 248 (513)
+++...+...+..++|.|++| +|.|..+.++..+...+...++.++.|.+.||.+|++...- ..+...+.........
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGA 91 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 444445556677788999977 69999999999999999999999999999999998532211 1111111122222222
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 249 CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
++.+.......+.....+...+.......+. .++++.+.+.....+++|..++|.+.+.+.+.
T Consensus 92 ~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~ 154 (382)
T PRK11128 92 HSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW 154 (382)
T ss_pred ccHHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333332222211222233333333333333 45677888888888899999999999988764
No 180
>PTZ00207 hypothetical protein; Provisional
Probab=98.80 E-value=4.8e-06 Score=87.97 Aligned_cols=137 Identities=9% Similarity=-0.064 Sum_probs=83.6
Q ss_pred chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh--hhHHhchhHHHHHHHHHhhhhhcCCCcccc--
Q psy13668 153 PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS--VDLISGWPNRSVIVTYKMRTILSGPRLTSP-- 228 (513)
Q Consensus 153 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~--~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-- 228 (513)
++++.+++..+|++++.+++.......+...+....+..-|.+.++ ..++.+...+.+.+|++..|+++....+|+
T Consensus 345 t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~ 424 (591)
T PTZ00207 345 TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE 424 (591)
T ss_pred hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccc
Confidence 6778888999999999999998888888888877776643773333 333788999999999999999882211111
Q ss_pred --h-----hhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHH
Q psy13668 229 --F-----DFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALV 291 (513)
Q Consensus 229 --~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~ 291 (513)
+ +.+..+ +.++.+++..........+..+ +...+.|...+.......+++.++-|+-.-+.
T Consensus 425 ~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~-lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~ 492 (591)
T PTZ00207 425 DRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYF-IAAFANGFMAATIALVTRTIFAKDPAKHYNFC 492 (591)
T ss_pred cccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHH-HHHHHhhHhHHHHHHHHHHHhccchHHHhhHH
Confidence 1 222222 3333333333222122222222 22334566666666667776666666554433
No 181
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.80 E-value=6.3e-06 Score=86.72 Aligned_cols=136 Identities=9% Similarity=-0.053 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHHh--cCcchh------hhhHHhchhHHHHHHHHHhh----hhhcCCCcccchhhHhhHHH
Q psy13668 170 QIGHDFGLFTIVTDLPKYMKDV--LHFSIT------SVDLISGWPNRSVIVTYKMR----TILSGPRLTSPFDFSASVGP 237 (513)
Q Consensus 170 ~~~~~~~~~~~~~~lp~~l~~~--~g~s~~------~~~~~~~~~~~~~~ig~~~~----g~l~dr~~~~~~~~~~~~~~ 237 (513)
.++....+|......|.++.+. .+.+.. ..+.+.+...+..++..++. +++.||.+..+....+++..
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~ 360 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLC 360 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHH
Confidence 4455566777777777776641 222211 13344445554444554444 66666666666677778877
Q ss_pred HHHHHHHHhcCC--------hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHH
Q psy13668 238 GLGILAASYSGC--------NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYL 305 (513)
Q Consensus 238 ~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l 305 (513)
+++.+.+..... +.++.+....+....-....|.......+..| +.||+.+|+......+++.++..+
T Consensus 361 ~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~ 437 (500)
T PRK09584 361 SGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYV 437 (500)
T ss_pred HHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766544322 12233333333333345555666666767776 569999997666655555555433
No 182
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.78 E-value=6.9e-08 Score=101.02 Aligned_cols=152 Identities=13% Similarity=0.044 Sum_probs=119.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC-CcccchhhHhhHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSPFDFSASVGPGL 239 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~ 239 (513)
+.++..++..+.-..++|+...+++.|+++.+|++..++............+..+++|+++|| +|||+....+.+...+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 457777888888889999999999999999999999999888888888888888899999999 9999999999999988
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-c--hhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 240 GILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-N--YAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~--~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
+.+.+...............+...+.+...+.......|.+| + +|+.+.++.+...++|+.++|.+.+.+.+.
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~ 169 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK 169 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 887777654433222222222223345555666667777664 3 357789999999999999999999988764
No 183
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.77 E-value=2.1e-07 Score=97.36 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc
Q psy13668 168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS 247 (513)
Q Consensus 168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~ 247 (513)
...++.....+......|.+ ++.+|+|..+.+...+...++..++.++.|+++||+|||+....+.+..+++.++..+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 121 (476)
T PLN00028 43 ISFFTCFVSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV 121 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh
Confidence 33344444444444445544 56689999999999888889999999999999999999999888887777777766665
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 248 GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
.+.....+..+..+++... ..+ ......+..| ++||.++|+.+...++++.+++.+.+.+
T Consensus 122 ~s~~~l~~~r~l~G~~~~~-~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 122 SSATGFIAVRFFIGFSLAT-FVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred cCHHHHHHHHHHHHHHHHh-hHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443333333333433322 222 2334456664 6799999999888888777776655433
No 184
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.77 E-value=1.2e-07 Score=94.57 Aligned_cols=144 Identities=19% Similarity=0.140 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc
Q psy13668 168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS 247 (513)
Q Consensus 168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~ 247 (513)
+..++...........+|.++.+.+|.|..+.+++.+...++..++.+..|+++||+|||+....+.++.+++.+...+.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 44555556666666777767788899999999999999999999999999999999999999888888888884444443
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 248 GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
++.+ .......+.....+...+.......|..| ++|+.+.++.+...+++..++|.+.+.+.+.
T Consensus 83 ~~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 147 (352)
T PF07690_consen 83 SNFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY 147 (352)
T ss_dssp CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred hhHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc
Confidence 3333 33333333233345666667777777776 5899999999999999999999999998854
No 185
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.75 E-value=3e-07 Score=94.04 Aligned_cols=141 Identities=13% Similarity=-0.040 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-----cccc-hhhHhhHHHHHHH
Q psy13668 168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-----LTSP-FDFSASVGPGLGI 241 (513)
Q Consensus 168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~-~~~~~~~~~~~~~ 241 (513)
..++.+.........-+|.|+++. |+|.++.|++...... .+..++.|.++||+ |||| ++..+.++.++++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 344555566666777899999986 9999999998666654 58889999999999 7765 6777777777666
Q ss_pred HHHHhcCC-h-hHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 242 LAASYSGC-N-RLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 242 ~~l~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
..+.+.+. . .+.......+...+.....+.......+..| ++|+.+.++......++..+++.+.+.+.+
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~ 155 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD 155 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 66665533 2 2222222222223444555666677777775 559999999998888999998888777765
No 186
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.74 E-value=2.3e-06 Score=84.60 Aligned_cols=158 Identities=17% Similarity=0.208 Sum_probs=113.4
Q ss_pred chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcC-CCcccchhh
Q psy13668 153 PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSG-PRLTSPFDF 231 (513)
Q Consensus 153 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d-r~~~~~~~~ 231 (513)
.++++..+|+....+...+....+++.=-..+-+|--+.+|+|..+...+......+.++|....|++.. |.++++...
T Consensus 200 a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~ 279 (403)
T PF03209_consen 200 AWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAA 279 (403)
T ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHH
Confidence 3466667777766666666666666655556777888899999999999999999999999999998777 566777777
Q ss_pred HhhHHHHHHHHHHHhc---CChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 232 SASVGPGLGILAASYS---GCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 232 ~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
.++...++++.++... .+........+.++++ .+.........+.++. +++.|+..|.-...+.++..++..+.|
T Consensus 280 ~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g-~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG 358 (403)
T PF03209_consen 280 LGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLG-NGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGG 358 (403)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHh-hhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777766555443 2222233333334333 3344444455555665 688999999999999999999998888
Q ss_pred Hhcc
Q psy13668 308 VLTP 311 (513)
Q Consensus 308 ~l~~ 311 (513)
.+.|
T Consensus 359 ~~~D 362 (403)
T PF03209_consen 359 ALRD 362 (403)
T ss_pred HHHH
Confidence 7776
No 187
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.73 E-value=3.7e-07 Score=94.39 Aligned_cols=136 Identities=6% Similarity=-0.067 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcC---cchhh---hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668 168 IAQIGHDFGLFTIVTDLPKYMKDVLH---FSITS---VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI 241 (513)
Q Consensus 168 l~~~~~~~~~~~~~~~lp~~l~~~~g---~s~~~---~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 241 (513)
+..++...-...+ .....++.+.++ .+..+ .+.......++..+|.++.|+++||+|||+.+..+.+..+++.
T Consensus 29 ~~~~~~~~d~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 107 (432)
T PRK10406 29 SGNLVEWFDFYVY-SFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGS 107 (432)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3344434444443 344445555553 44443 3344455566777999999999999999999999999888888
Q ss_pred HHHHhcCChhH--------HHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668 242 LAASYSGCNRL--------AVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYL 305 (513)
Q Consensus 242 ~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l 305 (513)
+...+.++-.. ..+.-+..+.+ .+...+.......|.. +++||...++.+.....|..+++.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g-~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 108 LVIACLPGYETIGTWAPALLLLARLFQGLS-VGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHhhcCCchhHHHHHHHHHHHHHHHHHhh-hhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 87766553211 11122223322 3445555666667766 5779999888777666666665544
No 188
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.70 E-value=1.6e-07 Score=95.38 Aligned_cols=83 Identities=17% Similarity=0.117 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCc-ccchhhHhhHHHHHHHHHH
Q psy13668 166 LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRL-TSPFDFSASVGPGLGILAA 244 (513)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~-~~~~~~~~~~~~~~~~~~l 244 (513)
+...+++....+-.+..++|.|+++. |+|..|+|.+.+...+..+++.++.|+++||.+ +|+.+....+..++.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~-G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESR-GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 34445555566666777899999885 899999999999999999999999999999976 4566666666666655555
Q ss_pred HhcCC
Q psy13668 245 SYSGC 249 (513)
Q Consensus 245 ~~~~~ 249 (513)
....+
T Consensus 86 ~~~~~ 90 (400)
T PF03825_consen 86 AFSSS 90 (400)
T ss_pred HHhcc
Confidence 44444
No 189
>KOG2563|consensus
Probab=98.62 E-value=1.6e-07 Score=92.99 Aligned_cols=166 Identities=11% Similarity=0.032 Sum_probs=105.8
Q ss_pred hhhhhh--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q psy13668 10 MLHRLV--NEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSG 87 (513)
Q Consensus 10 ~~~~~~--~~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (513)
+...|| +||..+..+...++++|.+++-++...|+..-..
T Consensus 164 iA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~-------------------------------------- 205 (480)
T KOG2563|consen 164 IAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKD-------------------------------------- 205 (480)
T ss_pred HHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCC--------------------------------------
Confidence 445677 3666666666666677777666666555443200
Q ss_pred HHHhccCCchH--HHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHH
Q psy13668 88 LLIRYLGGWTS--VFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIG 165 (513)
Q Consensus 88 ~l~~~~~gWr~--~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 165 (513)
.+.. .|.. .|+..+.++.+.+.+..+..+++|...|.. .+...+ ...-..+.++.+++++|..
T Consensus 206 --~~~~-~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~-------s~~~~~-----~~~f~~si~~~~~n~~F~i 270 (480)
T KOG2563|consen 206 --SEDN-SWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSA-------SQAALQ-----DASFPKSIKSCFKNRQFII 270 (480)
T ss_pred --cchh-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCch-------hHhhhh-----cCcHHHHHHHHHcCccHHH
Confidence 0112 4544 344444444444444455555555443333 221111 0112234578899999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668 166 LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPF 229 (513)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 229 (513)
..+.+.+....+++..+.+-.-+.. .|++...+|.......+++++|+...|.+.||.+.-+.
T Consensus 271 l~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~ 333 (480)
T KOG2563|consen 271 LAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKL 333 (480)
T ss_pred HHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 9999888888888887777655554 48888889999999999999999999999999775443
No 190
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.62 E-value=8.7e-07 Score=90.24 Aligned_cols=147 Identities=8% Similarity=-0.164 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHH--hchhHHHHHHHHHhh-hhhcCCCcccchhhHhhHH-HHH
Q psy13668 164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLI--SGWPNRSVIVTYKMR-TILSGPRLTSPFDFSASVG-PGL 239 (513)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~--~~~~~~~~~ig~~~~-g~l~dr~~~~~~~~~~~~~-~~~ 239 (513)
......++.+...+......+|.|++|. |+|..+.|++ ...+.....+..++. ++.+||.||||..+..... ...
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~-g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLRED-GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 3445566677777777788999999886 9999999997 456677887777777 6689999988876544432 222
Q ss_pred HHHHHHhc-CC-h-hHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 240 GILAASYS-GC-N-RLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 240 ~~~~l~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+...+... .. . ..+.+........+.....+.......+.. +++++...+.......+|..+++.+.+.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~ 158 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG 158 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333322 11 1 112222222221222233333333333333 4456777777777777888888876666655
No 191
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.62 E-value=1e-06 Score=92.70 Aligned_cols=148 Identities=10% Similarity=0.029 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL 242 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 242 (513)
+...++..+.............|.+ .+.+|.|..+.+.+.+...++..++.+..|+++||+|||+....+.++.+++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 100 (496)
T PRK03893 22 FSAAWLGYLLDGFDFVLITLVLTEV-QGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTL 100 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3445555555555555555556554 566899999999999999999999999999999999999998888888877777
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 243 AASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 243 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.+.+..+........+..+++ .+...+.......+.. +++|+.+.++.+....++..++|.+.+.+.+.
T Consensus 101 ~~~~~~~~~~l~~~~~l~G~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 170 (496)
T PRK03893 101 ACGFAPGYWTLFIARLVIGMG-MAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV 170 (496)
T ss_pred HHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 766654333333333333332 3334444445555665 56799999999999999999999999887763
No 192
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.59 E-value=9.4e-07 Score=85.29 Aligned_cols=124 Identities=15% Similarity=0.034 Sum_probs=94.3
Q ss_pred HHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhh
Q psy13668 188 MKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGA 267 (513)
Q Consensus 188 l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 267 (513)
+++.+|+|...++++++.+.++....++...++.+|++.++.+..+++..+++..+-...+ ........... ....+.
T Consensus 38 Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~-~~~L~~gt~l~-G~gIav 115 (395)
T COG2807 38 IRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGG-LPLLFLGTLLA-GAGIAV 115 (395)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHH-HhhHHH
Confidence 4566899999999999999999999999999999999999999999998888888776662 22222111111 112233
Q ss_pred hhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 268 FLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 268 ~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
..........+-+|++.+..+|++.+..++++++++.+.--+.++.
T Consensus 116 ~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~ 161 (395)
T COG2807 116 INVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS 161 (395)
T ss_pred HHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh
Confidence 3444567788888999999999999999998888877766555433
No 193
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.59 E-value=4.6e-11 Score=124.16 Aligned_cols=286 Identities=14% Similarity=0.083 Sum_probs=152.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHH--------------hhh-----------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFA--------------TGA----------- 75 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~--------------~~~----------- 75 (513)
..+...+...+|..+|.++.|.+.|++ |+|.++.+...+..+-.++..+.. .|.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 367788889999999999999999999 999888754322211111000000 000
Q ss_pred ----------------------hhHHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcc
Q psy13668 76 ----------------------QIGNVVSMAVSGLLIRYL--GGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAY 131 (513)
Q Consensus 76 ----------------------~~g~~~~~~~~~~l~~~~--~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 131 (513)
.+|..++..+........ .+||..+.+..+++++..+. .+++||.|...-...+.
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~-~~~~pESP~wL~~~~~~ 204 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLL-RFFLPESPRWLLSKGRD 204 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccceecccccc
Confidence 122222222222111111 15999998877777655433 35678877432111000
Q ss_pred cc---cccc--------cchhhhhcc-CC--CCCCchhhhccchh----HHHHHHHHHHHHHHH-HHHHhhHHHHHHHhc
Q psy13668 132 GT---AVMH--------KSNRFIFSF-QN--LPPTPWGKIATSAP----VIGLIIAQIGHDFGL-FTIVTDLPKYMKDVL 192 (513)
Q Consensus 132 ~~---~~~~--------~~~~~~~~~-~~--~~~~~~~~~l~~~~----~~~~~l~~~~~~~~~-~~~~~~lp~~l~~~~ 192 (513)
.+ ..++ ++.+...+. ++ ..+..++++++++. ............... +....+.|.+++ ..
T Consensus 205 ~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-~~ 283 (451)
T PF00083_consen 205 EEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-NA 283 (451)
T ss_pred cccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccc-cc
Confidence 00 0000 000000000 00 01134566666533 222222222222222 333444555544 34
Q ss_pred CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHH---hc-CCh----hHHHHHHHHH-HHH
Q psy13668 193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAAS---YS-GCN----RLAVTVSFTL-GMG 263 (513)
Q Consensus 193 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~---~~-~~~----~~~~~~~~~~-~~~ 263 (513)
+.+.. -.......+...++.+.+.++.||+|||+....+..+.+++...+. .. ... ....+....+ ...
T Consensus 284 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~ 361 (451)
T PF00083_consen 284 GISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAF 361 (451)
T ss_pred ccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccc
Confidence 66555 3333445566677778888999999999998888887777666553 11 111 1111111111 122
Q ss_pred HHhhhhhhHHHhhcccCcc-hhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 264 TMGAFLPSLKVNALDLSPN-YAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 264 ~~~~~~~~~~~~~~~~~p~-~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
+.....+.......|++|. .|+++.|+.+..+.+++.++|.+...+.+
T Consensus 362 ~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~ 410 (451)
T PF00083_consen 362 FSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN 410 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2223344555777888875 59999999999999999988877655554
No 194
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.57 E-value=2.5e-05 Score=79.35 Aligned_cols=273 Identities=11% Similarity=0.002 Sum_probs=144.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHH----------------------------------
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFA---------------------------------- 66 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~---------------------------------- 66 (513)
..+...+.+..|.++..+.+|+++||+ |-|+++...++...+...
T Consensus 63 v~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~ 141 (511)
T TIGR00806 63 VTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFS 141 (511)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367888899999999999999999999 777776643322211110
Q ss_pred ---------HHHHHHhhhhhHHHHHHHHHHHHHhccCCchHHHHH--HHHHHHHHHHHHHHhccCCCCC---ccchhccc
Q psy13668 67 ---------LWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVFYV--FGAVGLAWFALWMTFASSDPSE---STHYVAYG 132 (513)
Q Consensus 67 ---------~~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f~i--~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~ 132 (513)
.......+.++|.++++++++. ...+ |||+-+.. +.+....+++++-+++|..++. ++......
T Consensus 142 WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~-gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~ 219 (511)
T TIGR00806 142 LVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTL-GWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRG 219 (511)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc-CchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhcccccccc
Confidence 0112333446888999999888 5566 99986654 4555555666666777732221 00000000
Q ss_pred ccccccchhhhhcc-CCC---C----------CCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh
Q psy13668 133 TAVMHKSNRFIFSF-QNL---P----------PTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS 198 (513)
Q Consensus 133 ~~~~~~~~~~~~~~-~~~---~----------~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~ 198 (513)
....+.+.....+. .+. + ...+++..+|+.+..-.+=..+..++++-+.+|......+...-...-
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~y 299 (511)
T TIGR00806 220 ALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKY 299 (511)
T ss_pred ccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCcccc
Confidence 00000000000000 000 0 012233456666555555556667777778878777776553322224
Q ss_pred hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHH--HHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhh-HHHh
Q psy13668 199 VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGP--GLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPS-LKVN 275 (513)
Q Consensus 199 ~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 275 (513)
.|..-....+.+.+..+..|++-.++.+-..+..+.+.. +.+++++.+. .+.+......++......+..+. ....
T Consensus 300 NG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t-~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 300 NGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQS-HDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666777788888999999877664322333333222 2222223232 23333323222222222333332 3344
Q ss_pred hcccCcchhHHHHHHHHHHHhH
Q psy13668 276 ALDLSPNYAGTLMALVGGIGAL 297 (513)
Q Consensus 276 ~~~~~p~~~g~~~gi~~~~~~i 297 (513)
...+..+.-|...|++++..-+
T Consensus 379 A~~L~~~~~aLvFGiNtfvAl~ 400 (511)
T TIGR00806 379 ASSLSKELCALVFGINTFVATA 400 (511)
T ss_pred HHHhcccceEEEEecHHHHHHH
Confidence 4455556678888888777544
No 195
>PRK09848 glucuronide transporter; Provisional
Probab=98.57 E-value=8.5e-07 Score=92.14 Aligned_cols=73 Identities=8% Similarity=-0.074 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC----cccc-hhhHhhHHHHHHH
Q psy13668 169 AQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR----LTSP-FDFSASVGPGLGI 241 (513)
Q Consensus 169 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~----~~~~-~~~~~~~~~~~~~ 241 (513)
..+..+........+++.|+++..|+++.+.|.+..+..+...+..++.|+++||. |||+ .+..+.+...+..
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~ 93 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFS 93 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHH
Confidence 33334444455566778899999999999999999999999999999999999996 5555 3344444344333
No 196
>PRK15075 citrate-proton symporter; Provisional
Probab=98.57 E-value=1.5e-06 Score=89.97 Aligned_cols=145 Identities=8% Similarity=-0.039 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhH-Hhchh-----HHHHHHHHHhhhhhcCCCcccchhhHhhHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDL-ISGWP-----NRSVIVTYKMRTILSGPRLTSPFDFSASVG 236 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~-~~~~~-----~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 236 (513)
....++..++...-...+....|...+ .++.+..+.+. ..+.. .+...++.+..|+++||+|||+....+.+.
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAK-TFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 444555666666666666667775554 56877666433 22221 223357889999999999999999999988
Q ss_pred HHHHHHHHHhcCChhHH--------HHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 237 PGLGILAASYSGCNRLA--------VTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 237 ~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
..++..+..+.++.... .+..+..+.+ .+...+.......|..| ++||.+.++.+...+++..+++.+.+
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~-~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~ 174 (434)
T PRK15075 96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFS-AGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGY 174 (434)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhcc-ccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877776543211 1111222222 23334444556667764 67999999988887777766666555
Q ss_pred Hh
Q psy13668 308 VL 309 (513)
Q Consensus 308 ~l 309 (513)
.+
T Consensus 175 ~l 176 (434)
T PRK15075 175 LL 176 (434)
T ss_pred HH
Confidence 43
No 197
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.53 E-value=2e-06 Score=88.23 Aligned_cols=149 Identities=11% Similarity=0.035 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHH
Q psy13668 162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGI 241 (513)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 241 (513)
+++..+...+............+|.+ ++.+|+|..+.+++.+...++..++++..|++.||+|||+....+.++.+++.
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 34445555554444443344556555 77889999999999999999999999999999999999999999999888887
Q ss_pred HHHHhcC--ChhHHHHH-HHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 242 LAASYSG--CNRLAVTV-SFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 242 ~~l~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.+..... .+....+. .+..+.+ .+...+.......+.. ++++++..++.+...++|..++|.+.+.+...
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAG-LGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhh-HHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7654432 23332222 2333333 3344443344444444 46799999999999999999999999887643
No 198
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.52 E-value=1.9e-06 Score=87.29 Aligned_cols=131 Identities=11% Similarity=-0.059 Sum_probs=105.1
Q ss_pred HHHhhHHHHHHHhcCcchhh-hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHH
Q psy13668 179 TIVTDLPKYMKDVLHFSITS-VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVS 257 (513)
Q Consensus 179 ~~~~~lp~~l~~~~g~s~~~-~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 257 (513)
.-..+...++.+.+|+|..+ .+.+......+..+..+.+|+++||+|.|+++..+.+.-.+...++.+..+-....+.-
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556777789999999 99999999999999999999999999999999999998888888888765544444444
Q ss_pred HHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 258 FTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
+..|.+-.... +.......-+++++|++++|+.+....+|.++++.+.+.+.
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555544444 44445555556788999999999999999999999999844
No 199
>KOG3764|consensus
Probab=98.52 E-value=6.5e-07 Score=87.19 Aligned_cols=118 Identities=14% Similarity=0.036 Sum_probs=92.1
Q ss_pred CcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhH
Q psy13668 193 HFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSL 272 (513)
Q Consensus 193 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (513)
+-+.++.|++.....+.+++.+++.|.+.||+|+|..++++++.+....+++.+..+-+...+.-..=+.+.. .....-
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA-~~~tsg 180 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSA-FADTSG 180 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHH-HHHhhh
Confidence 4456789999999999999999999999999999999999999999999888887665533333222222222 223333
Q ss_pred HHhhcccCcc--hhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 273 KVNALDLSPN--YAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 273 ~~~~~~~~p~--~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.....|.+|+ +||.++|+.-.+..+|..+||.+.|.+.+
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe 221 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE 221 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh
Confidence 4555666664 38999999999999999999999999887
No 200
>PRK09669 putative symporter YagG; Provisional
Probab=98.50 E-value=1.5e-06 Score=90.16 Aligned_cols=135 Identities=13% Similarity=0.046 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Cccc-chhhHhhHHHHHHHHHHH
Q psy13668 171 IGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLTS-PFDFSASVGPGLGILAAS 245 (513)
Q Consensus 171 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~-~~~~~~~~~~~~~~~~l~ 245 (513)
+..+.....+..+++.|+.|.+|+|+...+.+....-+...+..++.|+++|| +||| +.+..+.+..+++..++.
T Consensus 19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f 98 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF 98 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 34444455667789999999999999999999999999999999999999999 5554 555566566656555544
Q ss_pred hcCCh--h---HHHHHHHHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668 246 YSGCN--R---LAVTVSFTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYL 305 (513)
Q Consensus 246 ~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l 305 (513)
..+.. . ........+..........++.+...+.. +++|....+.-....++|+.+++.+
T Consensus 99 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~ 165 (444)
T PRK09669 99 YTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI 165 (444)
T ss_pred hCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44321 1 11111111112222334445556666665 4678888777777777776666554
No 201
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.48 E-value=3.1e-06 Score=82.95 Aligned_cols=128 Identities=15% Similarity=0.057 Sum_probs=97.5
Q ss_pred hHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh---HHHHHHHH
Q psy13668 183 DLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR---LAVTVSFT 259 (513)
Q Consensus 183 ~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~ 259 (513)
-+-+.+++.++++..+++++......+-.++++..+++.+|+++|+-+..++.+.++++.++.-..... .....++.
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFi 113 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFI 113 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence 455667889999999999999999999999999999999999999999999999999988876433322 22222233
Q ss_pred HHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 260 LGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
++.+. +..-......+..+. |+.......+.+.+..+|++++|.+.+.++.
T Consensus 114 la~Gi-~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 114 LASGI-GLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHhhh-HHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 33332 222233334444455 4568888999999999999999999998876
No 202
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.48 E-value=1.5e-06 Score=90.46 Aligned_cols=131 Identities=12% Similarity=0.013 Sum_probs=95.0
Q ss_pred HHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHH-H
Q psy13668 180 IVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVS-F 258 (513)
Q Consensus 180 ~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~ 258 (513)
+..+.|.+. +.+|.+..+.++..+...+...++.++.|+++||++||+.+..+.+...++.+...+.++........ +
T Consensus 38 ~~~~~~~i~-~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 116 (455)
T TIGR00892 38 VTVFFKELQ-QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGF 116 (455)
T ss_pred hhhhHHHHH-HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 445566654 45799999999999999888899999999999999999998888877777766665544322222111 2
Q ss_pred HHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 259 TLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
..+.+.. ...+.......+..+++|+.+.|+.+....++..++|.+.+.+.+.
T Consensus 117 l~G~~~~-~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~ 169 (455)
T TIGR00892 117 ITGLGLA-FNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFES 169 (455)
T ss_pred HHHhcch-hhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 2222222 2223333455566688899999999999999999999999888774
No 203
>PTZ00207 hypothetical protein; Provisional
Probab=98.43 E-value=5.9e-06 Score=87.31 Aligned_cols=137 Identities=11% Similarity=-0.040 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC--
Q psy13668 172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC-- 249 (513)
Q Consensus 172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~-- 249 (513)
.+....|++..+.|. +++.+|+|..+.+.+....... ....+..|++.||+|+|++..++.+...++.+......+
T Consensus 38 ~~~g~~y~fsv~s~~-L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~ 115 (591)
T PTZ00207 38 ICTSFMYAFNLISGA-MQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV 115 (591)
T ss_pred HHHHHHHHHHHHHHH-HHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 334455666666665 5677899999988887663333 345667899999999999999999999998887776521
Q ss_pred ---hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 250 ---NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 250 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
+.+...+...+.....+...+.......+.+|++||.+.|+......+|+++.+.+...+.
T Consensus 116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222223333344455556678999999999999999999987555554443
No 204
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.42 E-value=3.6e-06 Score=86.93 Aligned_cols=139 Identities=14% Similarity=0.042 Sum_probs=98.0
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcC----CCccc-chhhHhhHHHHHHHHHHHh
Q psy13668 172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSG----PRLTS-PFDFSASVGPGLGILAASY 246 (513)
Q Consensus 172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d----r~~~~-~~~~~~~~~~~~~~~~l~~ 246 (513)
...........+++.|+.|..|+++...+++....-+...+..++.|.++| |+||| +.+..+....+++..++..
T Consensus 12 ~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~ 91 (428)
T PF13347_consen 12 GYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFS 91 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhc
Confidence 334444556678899999999999999999999999999999999999999 67755 5566777788887777776
Q ss_pred c-CChh------HHHHHHHHHHHHHHhhhhhhHHHhhcccCc--chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 247 S-GCNR------LAVTVSFTLGMGTMGAFLPSLKVNALDLSP--NYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 247 ~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
. +... ........+...+......++.+...|+.+ ++|....+.-.....+|..+...+.+.+.
T Consensus 92 ~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~ 164 (428)
T PF13347_consen 92 PPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILV 164 (428)
T ss_pred cccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 5 3111 111222222223334444556777778874 56999999888888888766655555554
No 205
>KOG1330|consensus
Probab=98.41 E-value=7.9e-07 Score=88.41 Aligned_cols=55 Identities=7% Similarity=-0.041 Sum_probs=47.0
Q ss_pred HHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHH
Q psy13668 188 MKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGIL 242 (513)
Q Consensus 188 l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 242 (513)
.++.+|.+....|++.....+...+.++++|++.||++||+++..+..+-.++.+
T Consensus 59 v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~ 113 (493)
T KOG1330|consen 59 VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVF 113 (493)
T ss_pred HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHH
Confidence 4566889999999999999999999999999999999999998876665444433
No 206
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.40 E-value=2.1e-06 Score=86.86 Aligned_cols=101 Identities=9% Similarity=-0.050 Sum_probs=67.4
Q ss_pred HHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHH------HHHHHHHHHH-HHhhhhhhHHHhhcccC
Q psy13668 208 RSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLA------VTVSFTLGMG-TMGAFLPSLKVNALDLS 280 (513)
Q Consensus 208 ~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 280 (513)
+...++.++.|+++||+|||+....+.+...++.......++.... .+...-+..+ ..+...+.......|..
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA 125 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence 3345788999999999999999999888888887777766543211 1111111111 12233344455566666
Q ss_pred -cchhHHHHHHHHHHHhHHhhHHHHHHHH
Q psy13668 281 -PNYAGTLMALVGGIGALSGTVSPYLVGV 308 (513)
Q Consensus 281 -p~~~g~~~gi~~~~~~i~~~igp~l~g~ 308 (513)
+++|+...+..+....+|..+++.+.+.
T Consensus 126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~ 154 (394)
T TIGR00883 126 PPGKRGFYGSFQQVGAPVGLLLAALTVLL 154 (394)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999998888888888776543
No 207
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.37 E-value=2.7e-06 Score=85.41 Aligned_cols=127 Identities=15% Similarity=0.064 Sum_probs=93.0
Q ss_pred hHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q psy13668 183 DLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGM 262 (513)
Q Consensus 183 ~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 262 (513)
.+|.+ ++.+|+|..+.++..+...++..++.+..|+++||++||+....+.+...++.... ..++.....+..+..++
T Consensus 22 ~lp~l-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~ 99 (355)
T TIGR00896 22 LLPQI-RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGV 99 (355)
T ss_pred cHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHH
Confidence 45555 45679999999999999999999999999999999999999888877766665554 33332222222222233
Q ss_pred HHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 263 GTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
+. +...+.......+..|++|+.+.++.+...+++..+++.+.+.+.+.
T Consensus 100 g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 100 GI-AIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred HH-HHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 22233344455677788899999999999999999999988877653
No 208
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.36 E-value=9.3e-06 Score=84.31 Aligned_cols=108 Identities=10% Similarity=-0.080 Sum_probs=76.1
Q ss_pred hHHhchhHHHHHHHHHhhhhhcCCCcccchhhH-hhHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHHhhhhhhHHHhhc
Q psy13668 200 DLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS-ASVGPGLGILAASYS-GCNRLAVTVSFTLGMGTMGAFLPSLKVNAL 277 (513)
Q Consensus 200 ~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (513)
+...++..+...+..++.|-++|+.++||.... ..+...++...+.+. +.++.....++.++..+.......+.+...
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP 152 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLP 152 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 345667777888889999999999887765544 444555555555554 444455566666666666666677777777
Q ss_pred ccCc-chh--------------------------HHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 278 DLSP-NYA--------------------------GTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 278 ~~~p-~~~--------------------------g~~~gi~~~~~~i~~~igp~l~g 307 (513)
++.+ +.+ +..++.....+++|+.+.-.+.-
T Consensus 153 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l 209 (477)
T PF11700_consen 153 DLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISL 209 (477)
T ss_pred hhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 8874 345 89999999999999987766543
No 209
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.32 E-value=3.9e-06 Score=90.58 Aligned_cols=71 Identities=14% Similarity=0.021 Sum_probs=57.7
Q ss_pred HHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHh
Q psy13668 176 GLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASY 246 (513)
Q Consensus 176 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~ 246 (513)
...++..-.-.-++++++++..+.|++.+...++..++.+..+++.||.+||+++.++.++.+++.++...
T Consensus 47 ~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~al 117 (633)
T TIGR00805 47 LYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSL 117 (633)
T ss_pred HHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhC
Confidence 33344444444567779999999999999999999999999999999999999999988887777665543
No 210
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.31 E-value=1.2e-07 Score=99.66 Aligned_cols=267 Identities=14% Similarity=0.122 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccCCchHHH
Q psy13668 21 NTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFATGAQIGNVVSMAVSGLLIRYLGGWTSVF 100 (513)
Q Consensus 21 ~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gWr~~f 100 (513)
+.|+..+...+|+++|..+++.+...+-+|... .+-+..+.|---.|+ ..|---|
T Consensus 178 YiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~---------------------~~~~~~i~p~dp~Wv----GAWWLGf 232 (539)
T PF03137_consen 178 YIGILYAMSILGPALGFLLGSFCLRIYVDFPKV---------------------PPDGVGITPSDPRWV----GAWWLGF 232 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhhhhHHhhccHHHHHHHHHHHHhceeCCccc---------------------cccCCCCCCCCccHH----HHHHHHH
Confidence 388999999999999999998877654222110 000001111111111 1355556
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCccchh--ccc-ccccccchhhhhc---------cCCCCCCchhhhccchhHHHHHH
Q psy13668 101 YVFGAVGLAWFALWMTFASSDPSESTHYV--AYG-TAVMHKSNRFIFS---------FQNLPPTPWGKIATSAPVIGLII 168 (513)
Q Consensus 101 ~i~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~l 168 (513)
.+.+.+.++..+..+++-++.|+.++..+ +.. ...++.+++...+ ..+.-....+++++||.+....+
T Consensus 233 li~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~l 312 (539)
T PF03137_consen 233 LICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLIL 312 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHH
Confidence 66777777777666666555555411100 000 0000000000000 01112345678899999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCcc--cchhhHhhHHHHHHHHH--
Q psy13668 169 AQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLT--SPFDFSASVGPGLGILA-- 243 (513)
Q Consensus 169 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~--~~~~~~~~~~~~~~~~~-- 243 (513)
..........++.+++|.|++.+++.++.++.++.....+ +..+|.+++|++.+|++- |+......+...+..+.
T Consensus 313 a~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~ 392 (539)
T PF03137_consen 313 AGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYS 392 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988766655 678999999999999753 33333222222222111
Q ss_pred -HH---------------hc-------------C------------------C--hhH--HHHHHHHH-HHHHHhhhhhh
Q psy13668 244 -AS---------------YS-------------G------------------C--NRL--AVTVSFTL-GMGTMGAFLPS 271 (513)
Q Consensus 244 -l~---------------~~-------------~------------------~--~~~--~~~~~~~~-~~~~~~~~~~~ 271 (513)
+. +. . . ... ..+.++.+ .+.......|.
T Consensus 393 ~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~ 472 (539)
T PF03137_consen 393 PLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPS 472 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccch
Confidence 10 10 0 0 000 11111111 22223445556
Q ss_pred HHHhhcccCcchhHHHHHHHHHHH-hHHhhHHHHHHHHhccc
Q psy13668 272 LKVNALDLSPNYAGTLMALVGGIG-ALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 272 ~~~~~~~~~p~~~g~~~gi~~~~~-~i~~~igp~l~g~l~~~ 312 (513)
......-+.+++|..+.|+..++. -+|.+-+|.+.|.++|.
T Consensus 473 ~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 473 TLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ------------------------------------------
T ss_pred heeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 667777777899999999988755 56668899999999985
No 211
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.29 E-value=5e-06 Score=83.90 Aligned_cols=94 Identities=15% Similarity=0.037 Sum_probs=79.5
Q ss_pred hhhccc-hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC----cchhhhhHHhchhHHHHHHHHHhhhhhcCC-Ccccc
Q psy13668 155 GKIATS-APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH----FSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSP 228 (513)
Q Consensus 155 ~~~l~~-~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g----~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~ 228 (513)
+..+++ +.++.++..-+.--+++|++..-+-.|+....+ +|.+++.-+...+....-...+++||++|| .|+|+
T Consensus 14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~ 93 (498)
T COG3104 14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR 93 (498)
T ss_pred cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence 345665 457788888888899999999999999988888 999999888888888888888999999999 69999
Q ss_pred hhhHhhHHHHHHHHHHHhcC
Q psy13668 229 FDFSASVGPGLGILAASYSG 248 (513)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~ 248 (513)
.++.+.++..++.+++....
T Consensus 94 tI~lGail~~iGh~~L~~~~ 113 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISS 113 (498)
T ss_pred HHHHHHHHHHHHHHHHhccc
Confidence 99999999888888877653
No 212
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.26 E-value=0.00072 Score=70.36 Aligned_cols=58 Identities=14% Similarity=0.292 Sum_probs=46.4
Q ss_pred hhhhhhhhh----hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHH
Q psy13668 8 NVMLHRLVN----EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFAL 67 (513)
Q Consensus 8 ~~~~~~~~~----~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~~~~~~ 67 (513)
+++++|++| +|.+..++.+.+..+|..++|.++|++.+.. |||+.|.+.+. +...+.+
T Consensus 122 ~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~~F~iaai-gm~l~li 183 (493)
T PRK15462 122 SCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAMGFGLAAV-GMIAGLV 183 (493)
T ss_pred HHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHHHHHHHHH-HHHHHHH
Confidence 567889985 3666789999999999999999999999999 99999987543 3333433
No 213
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.23 E-value=7.1e-06 Score=69.59 Aligned_cols=110 Identities=16% Similarity=0.060 Sum_probs=79.9
Q ss_pred HhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc
Q psy13668 202 ISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP 281 (513)
Q Consensus 202 ~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 281 (513)
......++..++.+..|++.||++||+....+.....++.+.....++........+..+ ...+...+.......|..|
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQG-FGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHCC
Confidence 345667788999999999999999999988887777777666655443333222222222 2334445556666667765
Q ss_pred -chhHHHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 282 -NYAGTLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 282 -~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
++|+++.++.+....++..++|.+.+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 113 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQF 113 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc
Confidence 6699999999999999999999999888753
No 214
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.23 E-value=5e-05 Score=78.58 Aligned_cols=145 Identities=12% Similarity=0.002 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcC----CCcccchhhHh-hHHHH
Q psy13668 164 IGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSG----PRLTSPFDFSA-SVGPG 238 (513)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d----r~~~~~~~~~~-~~~~~ 238 (513)
...+...+.....+-....+++.|++ .+|.+....+.+.....+...+..++.|+++| |+|||+..... .+...
T Consensus 7 i~~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~ 85 (477)
T TIGR01301 7 LRVASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH
Confidence 34444444555555555667778775 47999999999999999999999999999999 59999887664 55555
Q ss_pred HHHHHHHhcCCh------------hH----HHHHHHHHHHHHHhhhhhhHHHhhcccCcch---hHHHHHHHHHHHhHHh
Q psy13668 239 LGILAASYSGCN------------RL----AVTVSFTLGMGTMGAFLPSLKVNALDLSPNY---AGTLMALVGGIGALSG 299 (513)
Q Consensus 239 ~~~~~l~~~~~~------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~g~~~gi~~~~~~i~~ 299 (513)
+++.++.+..+. .. ..+..+.+.-.......+...+...|..|++ ++.+.++.+...++|+
T Consensus 86 ~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 86 FAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 565665543321 11 1122222223344455566777888888643 3789999999999999
Q ss_pred hHHHHHHHHh
Q psy13668 300 TVSPYLVGVL 309 (513)
Q Consensus 300 ~igp~l~g~l 309 (513)
.+++.+.+..
T Consensus 166 ilg~~~g~~~ 175 (477)
T TIGR01301 166 VLGYAAGAYS 175 (477)
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 215
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.20 E-value=1.2e-05 Score=84.48 Aligned_cols=93 Identities=14% Similarity=-0.035 Sum_probs=62.4
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHH----hhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchh
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIV----TDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD 230 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~----~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 230 (513)
...+++++++..+....+.....|... .-++...+ ..|-+ .+..++.....++..+..++.|+++|.+|||.+.
T Consensus 34 ~g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~-diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~ 111 (599)
T PF06609_consen 34 DGYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINA-DIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF 111 (599)
T ss_pred CCceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH-hcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Confidence 456677887766655444433333322 23443333 34654 4555666778889999999999999999999999
Q ss_pred hHhhHHHHHHHHHHHhcCC
Q psy13668 231 FSASVGPGLGILAASYSGC 249 (513)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~ 249 (513)
+.+.++..++.++.....+
T Consensus 112 i~g~~l~vvG~Iv~atA~~ 130 (599)
T PF06609_consen 112 IIGSLLGVVGSIVCATAQN 130 (599)
T ss_pred HHHHHHHHhHHHHhhcCCc
Confidence 9888877777766655443
No 216
>KOG2816|consensus
Probab=98.19 E-value=7.8e-05 Score=76.76 Aligned_cols=276 Identities=18% Similarity=0.219 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHHHHHhhccCchHHHHH------HHHHHHHHHHHHHHHHhhh--------------------------
Q psy13668 28 GAQIGNVVSMAVSGLLIRYLGGWTSVFYV------FGAVGLAWFALWMTFATGA-------------------------- 75 (513)
Q Consensus 28 ~~~lG~~i~~~i~g~L~~~~~gwr~if~~------~g~~~~~~~~~~~~~~~~~-------------------------- 75 (513)
...+.+.+..+.-|.++|++ ||+..+.. ...+...+...|.+...+.
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~~~~~~~~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQGYWFFLLLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHHHHHHhhhcccccchhhhhhhhhhheeeccchhHHHH
Confidence 45677888888999999999 88777653 1112222222111111110
Q ss_pred ---------hhHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccch-hcccccccccchhhhhc
Q psy13668 76 ---------QIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHY-VAYGTAVMHKSNRFIFS 145 (513)
Q Consensus 76 ---------~~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~ 145 (513)
..+..++|.+++.+.+.. |--..|.+..+..+...+...+++||...+.... . ...+......
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~------~~~~~~~~~~ 221 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA------TLRELTPGSL 221 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhccccccCccccccc------cccccCCCcc
Confidence 134567777788877776 8888888877777777766777777753332111 0 0000000000
Q ss_pred cCCCCCCch---hhhccchhHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhh-hh
Q psy13668 146 FQNLPPTPW---GKIATSAPVIGLIIAQIGHDFGLFTIVT-DLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRT-IL 220 (513)
Q Consensus 146 ~~~~~~~~~---~~~l~~~~~~~~~l~~~~~~~~~~~~~~-~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g-~l 220 (513)
........+ ...-.+|..+.+++..+........-.. .++.|+...++++..+.+.+.+.......+++.+.. .+
T Consensus 222 ~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l 301 (463)
T KOG2816|consen 222 DSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLL 301 (463)
T ss_pred cchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000011 1111235556656555554444433222 446677788899999999888888888888888877 77
Q ss_pred cCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhccc-CcchhHHHHHHHHHHHhHHh
Q psy13668 221 SGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDL-SPNYAGTLMALVGGIGALSG 299 (513)
Q Consensus 221 ~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~g~~~gi~~~~~~i~~ 299 (513)
....+.|+....+++...+......+....+........ ..+.....+..-+..... .++++|.+.++...+..+.+
T Consensus 302 ~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~--~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~ 379 (463)
T KOG2816|consen 302 SSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV--VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSG 379 (463)
T ss_pred HHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH--HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhh
Confidence 777888888888888777777777766554432222211 233344445544444444 47889999999999999999
Q ss_pred hHHHHHHHHhccch
Q psy13668 300 TVSPYLVGVLTPNW 313 (513)
Q Consensus 300 ~igp~l~g~l~~~~ 313 (513)
.++|.+.+.+...+
T Consensus 380 ~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 380 VVSPALYGNIFALT 393 (463)
T ss_pred hhhHHHHHHHHHHH
Confidence 99999988776533
No 217
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.18 E-value=8.3e-05 Score=75.68 Aligned_cols=144 Identities=12% Similarity=0.038 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC----cc-cchhhHhhHHHHHH
Q psy13668 166 LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR----LT-SPFDFSASVGPGLG 240 (513)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~----~~-~~~~~~~~~~~~~~ 240 (513)
....-+..+..+.....|+..|+.|..|+|+..+|.+..+.=+.-++.-++.|.++||. || |+.+..+.+..++.
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~ 96 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIV 96 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHH
Confidence 33444455566666778999999999999999999999999999999999999999984 44 45666776777776
Q ss_pred HHHHHhcCC-----hhHHHHHHHHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 241 ILAASYSGC-----NRLAVTVSFTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 241 ~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
..++...++ ....+.+...+...+......++.+...++. |++|....+.=....+++..+...+...+
T Consensus 97 ~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 97 AVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred HHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666553 1222333333333344455555666666665 67788888877777777765555444433
No 218
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.14 E-value=6.5e-05 Score=79.30 Aligned_cols=116 Identities=9% Similarity=-0.016 Sum_probs=85.4
Q ss_pred cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCCh-----hHHHHHHHHHHHHHHhhh
Q psy13668 194 FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCN-----RLAVTVSFTLGMGTMGAF 268 (513)
Q Consensus 194 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~ 268 (513)
.+..+.+++.+...++..++.++.|+++||+|||+....+.++..++.++....... ....+..-.+.....+..
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 132 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGD 132 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhh
Confidence 455667889999999999999999999999999999988888777777666554331 122222222222334455
Q ss_pred hhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 269 LPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 269 ~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
.+.......|..| ++||.+.++.+....+|..+++.+...+
T Consensus 133 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 133 YPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred hHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666677777775 6799999999999999998888876544
No 219
>KOG2615|consensus
Probab=98.04 E-value=9.2e-06 Score=78.89 Aligned_cols=133 Identities=18% Similarity=0.134 Sum_probs=96.4
Q ss_pred HHHHHhhHHHHHHHhcCc----chhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhH
Q psy13668 177 LFTIVTDLPKYMKDVLHF----SITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRL 252 (513)
Q Consensus 177 ~~~~~~~lp~~l~~~~g~----s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 252 (513)
.|.+.++.--.++...+. +..-+|++-+.+.+.+.+.++.+|.++||+|||+++.++.++.++.+.+......-
T Consensus 44 L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F-- 121 (451)
T KOG2615|consen 44 LYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF-- 121 (451)
T ss_pred hhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 344444444555544443 44567889999999999999999999999999999999988888866555443222
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 253 AVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.++.+-=+..+..-.......+...|+. +++|+.+++..++...+|-++||.+.|++..
T Consensus 122 ~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 1111111123333445556677888888 4679999999999999999999999999876
No 220
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.01 E-value=0.00016 Score=71.66 Aligned_cols=264 Identities=17% Similarity=0.082 Sum_probs=150.7
Q ss_pred HhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCc-----ccch-hhHhhHHHHHHHHHHHh----cCC-------hhH
Q psy13668 190 DVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRL-----TSPF-DFSASVGPGLGILAASY----SGC-------NRL 252 (513)
Q Consensus 190 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~-----~~~~-~~~~~~~~~~~~~~l~~----~~~-------~~~ 252 (513)
.+++++..-.+.+.....+... .++..|+.||+.+ ||.. +..+.+....+..+..+ ... +.+
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 4467777777777766666665 4899999999988 6644 44444444443333221 122 222
Q ss_pred H--HHHHHHHHHHH--HhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHHHHHHHhccchhhhHHHhh------
Q psy13668 253 A--VTVSFTLGMGT--MGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNS------ 321 (513)
Q Consensus 253 ~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l~~~------ 321 (513)
. ....+.+.... .........+...|..| ++|+.+.++.....-+|-+++..+.|.+++.+..+++.+-
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~ 166 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVAL 166 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHH
Confidence 2 12222221222 23334456777778875 6799999999999999999999999999998766654433
Q ss_pred ----------h-hhh-------------------hhhccCCCCCCCccchh-----------------------------
Q psy13668 322 ----------V-TYK-------------------MRTILSGPTLTSPFDFS----------------------------- 342 (513)
Q Consensus 322 ----------~-~~~-------------------~~~~~~~~~~~~~~~~~----------------------------- 342 (513)
+ .|+ .++...+||-.-.+.++
T Consensus 167 i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eT 246 (403)
T PF03209_consen 167 IALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGET 246 (403)
T ss_pred HHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHH
Confidence 0 000 00000001100000000
Q ss_pred ----------------------------------hcccchhhhhh---hhccCCchhHHHHHHHhhhccccccccccccc
Q psy13668 343 ----------------------------------ASVGPGLGILA---ASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVN 385 (513)
Q Consensus 343 ----------------------------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (513)
+.....+++.+ .+..+.........+.+|.+..-+.......+
T Consensus 247 T~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~m 326 (403)
T PF03209_consen 247 TRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLM 326 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 11222222222 22222222233333333333333444444555
Q ss_pred ccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHH
Q psy13668 386 ALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYC 462 (513)
Q Consensus 386 ~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~ 462 (513)
+.-..+++.|..+|.....+.++..++..++|.+.|-.. +++.. ....+|..+|..-++++++++++..
T Consensus 327 M~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~-------~~~~~-~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 327 MDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR-------ALFGN-SPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhccC-CcchHHHHHHHHHHHHHHHHHHHHH
Confidence 555668889999999999999999999999998876311 01110 1345899999999998888877643
No 221
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.87 E-value=2.6e-06 Score=88.50 Aligned_cols=40 Identities=13% Similarity=-0.073 Sum_probs=33.2
Q ss_pred hhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHH
Q psy13668 198 SVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGP 237 (513)
Q Consensus 198 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~ 237 (513)
+.++..+...++..+|+++.|+++||+|||+....+.+..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 4567788888999999999999999999998877644443
No 222
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.84 E-value=0.015 Score=59.42 Aligned_cols=150 Identities=7% Similarity=0.020 Sum_probs=95.0
Q ss_pred CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhh
Q psy13668 152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDF 231 (513)
Q Consensus 152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 231 (513)
.+|+..++++.+.......+++ ....++-..+..|+... |+|....+.+-....+.++.|.....++.+|+|..+.-.
T Consensus 250 ~~w~~Y~~q~vflas~alalLY-~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~ 327 (432)
T PF06963_consen 250 RGWRTYFRQPVFLASFALALLY-FTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGL 327 (432)
T ss_pred ccHHHHHhCHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHH
Confidence 3456667766655544444443 33445566778888876 999999999999999999999999999999999887776
Q ss_pred HhhHHHHHHHHHH---HhcCC-h-hHHHHHHHH--HHHHHHhhh--hhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhH
Q psy13668 232 SASVGPGLGILAA---SYSGC-N-RLAVTVSFT--LGMGTMGAF--LPSLKVNALDLS-PNYAGTLMALVGGIGALSGTV 301 (513)
Q Consensus 232 ~~~~~~~~~~~~l---~~~~~-~-~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~i 301 (513)
.+...-..++.+. .+.+. + .......+. +...=.|.. .-......+|.. +++||...|+.+...++...+
T Consensus 328 ~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 328 WSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 6665443333222 22222 2 122222222 222222322 223444555544 567999999999998877655
Q ss_pred HH
Q psy13668 302 SP 303 (513)
Q Consensus 302 gp 303 (513)
.-
T Consensus 408 ~~ 409 (432)
T PF06963_consen 408 SF 409 (432)
T ss_pred HH
Confidence 43
No 223
>KOG0255|consensus
Probab=97.83 E-value=9.5e-05 Score=78.41 Aligned_cols=122 Identities=17% Similarity=0.100 Sum_probs=97.5
Q ss_pred HhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhh
Q psy13668 190 DVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFL 269 (513)
Q Consensus 190 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (513)
+..+.+.....+..+...++..+|.++.|.++||+|||+++..++++..++.+...+.++-....+.-+..+++..+...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 44566777888889999999999999999999999999999999999999987777777666656555665555444444
Q ss_pred hhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 270 PSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 270 ~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
.......|+. |++|+.+..+ ......++.++|...+++.+++
T Consensus 191 -~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~W 233 (521)
T KOG0255|consen 191 -VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDW 233 (521)
T ss_pred -HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhH
Confidence 4444445555 7889999999 8899999999999999988854
No 224
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.79 E-value=0.00016 Score=67.91 Aligned_cols=141 Identities=13% Similarity=0.024 Sum_probs=100.4
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC--
Q psy13668 172 GHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC-- 249 (513)
Q Consensus 172 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~-- 249 (513)
......|.+..|-|.. ++++|+|.+|...+.....++..+| +..|.+.||.+.+....++.+...++...+.....
T Consensus 13 ~~~Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~ 90 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR 90 (250)
T ss_pred HhcCcccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3344567777777654 6789999999999999999998875 88899999999999999999988888877765322
Q ss_pred ---hhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccchh
Q psy13668 250 ---NRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWL 314 (513)
Q Consensus 250 ---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~ 314 (513)
...+.+ ....++................+.+|++||++.|+.-....+++++-..+...+.++..
T Consensus 91 i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~ 159 (250)
T PF06813_consen 91 IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDP 159 (250)
T ss_pred cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCCh
Confidence 122222 22222222222222333344445668999999999999999999988888777776533
No 225
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.77 E-value=8.6e-05 Score=73.55 Aligned_cols=122 Identities=9% Similarity=-0.084 Sum_probs=79.4
Q ss_pred hhHHHHHHHhcCc---chh----hhhHHhchhHHHHHHHHHhhhhhcCCCcccchh-hHhhHHHHHHHHHHHhcCC-hh-
Q psy13668 182 TDLPKYMKDVLHF---SIT----SVDLISGWPNRSVIVTYKMRTILSGPRLTSPFD-FSASVGPGLGILAASYSGC-NR- 251 (513)
Q Consensus 182 ~~lp~~l~~~~g~---s~~----~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~~l~~~~~-~~- 251 (513)
+..|.|+++..+- ++. ..+...++..+...+-.++-|.++|+.|+||.. .....+..+++..+.+.++ +.
T Consensus 36 ~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~ 115 (438)
T COG2270 36 FIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYL 115 (438)
T ss_pred ehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchH
Confidence 3467888777554 333 334556666777778889999999998866554 4445556666677777666 33
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHHH
Q psy13668 252 LAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVSP 303 (513)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~igp 303 (513)
+..+.++.+...........+.+...++.+ ++.++.++.....+++|+.+.-
T Consensus 116 ~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~l 168 (438)
T COG2270 116 LLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILL 168 (438)
T ss_pred HHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHH
Confidence 344444555555556666667777777775 4577777777777777665543
No 226
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.77 E-value=0.00035 Score=70.08 Aligned_cols=130 Identities=13% Similarity=-0.104 Sum_probs=87.0
Q ss_pred HhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-----cccch-hhHhhHHHHHHHHHHHhcCChh-H-
Q psy13668 181 VTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-----LTSPF-DFSASVGPGLGILAASYSGCNR-L- 252 (513)
Q Consensus 181 ~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~-~~~~~~~~~~~~~~l~~~~~~~-~- 252 (513)
..-+|.+++| +|+|.++.++.... .+...+ .++.|.+.||+ ||||. +..+.+..+++...+.+..+.. .
T Consensus 8 ~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 8 GNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred HhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 3356777776 59999999988644 333333 88999999997 78776 4555666666655555543322 1
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHhhcccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 253 AVTVSFTLGMGTMGAFLPSLKVNALDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
.......+...+.....+.......|.. +++|+.+.|+.....++|..+++.+.+.+.+..
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 146 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE 146 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 2222222222334444555666677776 577999999999999999999999998877543
No 227
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.77 E-value=0.0004 Score=72.48 Aligned_cols=148 Identities=9% Similarity=-0.041 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCc-----ccchhhHhhHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRL-----TSPFDFSASVGP 237 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~-----~~~~~~~~~~~~ 237 (513)
.......++..+.. +.....++.++++.+|+|..+.+.+.+...+...+-.+ +|.++||++ ||+.+..+.+..
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 34445556677776 77777889999999999999999998888888888555 999999985 455555555444
Q ss_pred -HHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhH---HHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 238 -GLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAG---TLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 238 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g---~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
.+++..+...++.......++.+............-....|..++++. ...+......++|..+++.+.|.+.+.
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~ 184 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK 184 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh
Confidence 233333332222222222222232333333334444444454443332 233444445568999999999988764
No 228
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.67 E-value=0.00013 Score=55.26 Aligned_cols=66 Identities=14% Similarity=0.011 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668 167 IIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA 233 (513)
Q Consensus 167 ~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 233 (513)
-..+++...+...+..++|.|+++ .|+|+.+.|++.....+...++.+++|.++||.++++.....
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 345566667777888899999997 699999999999999999999999999999999998876553
No 229
>KOG2504|consensus
Probab=97.65 E-value=0.00011 Score=77.03 Aligned_cols=150 Identities=11% Similarity=0.068 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHH---HHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLP---KYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGL 239 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp---~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 239 (513)
-|...+..|..+...+++..-.. ..+++.++.+..+.+++.++......+..++.+.+.||+|.|.+.+.+.++..+
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 35666666666666665544322 334566788888899999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChhHHHHHHHHHHHH-HHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 240 GILAASYSGCNRLAVTVSFTLGMG-TMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
++++..+..+-+. ..+.+.+..+ ..++.+....+....+++++|+.++|+......+|..+-|.+...+++.+
T Consensus 124 g~~lssF~~~i~~-l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~ 197 (509)
T KOG2504|consen 124 GLLLSSFATSLWQ-LYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHhhHHH-HHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh
Confidence 9998888876433 2333332222 24455555566666888999999999999999999999999999888753
No 230
>PRK11462 putative transporter; Provisional
Probab=97.64 E-value=0.00093 Score=69.62 Aligned_cols=138 Identities=9% Similarity=-0.029 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Cccc-chhhHhhHHHHHHHHHH
Q psy13668 170 QIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLTS-PFDFSASVGPGLGILAA 244 (513)
Q Consensus 170 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~-~~~~~~~~~~~~~~~~l 244 (513)
-+..+..+..+..|+..|+.|..|+++..++.+....-+...+.-++.|+++|| +||| +.+..+.+..+++..++
T Consensus 18 ~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll 97 (460)
T PRK11462 18 DAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA 97 (460)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH
Confidence 333444555566789999999999999999999999999999999999999997 4554 55666666666666665
Q ss_pred HhcCCh--hH---HHHHHHHHHHHHHhhhhhhHHHhhcccC--cchhHHHHHHHHHHHhHHhhHHHHHHH
Q psy13668 245 SYSGCN--RL---AVTVSFTLGMGTMGAFLPSLKVNALDLS--PNYAGTLMALVGGIGALSGTVSPYLVG 307 (513)
Q Consensus 245 ~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~g~~~gi~~~~~~i~~~igp~l~g 307 (513)
...+.. .. .......+...+......++.+...++. +++|...++.-...+++|+.+++.+..
T Consensus 98 f~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~ 167 (460)
T PRK11462 98 YSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMM 167 (460)
T ss_pred HhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544421 11 1111222222233444456667777776 567999999888888888777766543
No 231
>KOG0253|consensus
Probab=97.64 E-value=0.00073 Score=65.70 Aligned_cols=67 Identities=7% Similarity=-0.142 Sum_probs=52.5
Q ss_pred HHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHH
Q psy13668 177 LFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILA 243 (513)
Q Consensus 177 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 243 (513)
...+...+..-+++..+.+..+..++......+..+++..+|.++|++|||+..........+.-.+
T Consensus 93 ~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~i 159 (528)
T KOG0253|consen 93 EMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVI 159 (528)
T ss_pred HHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHh
Confidence 3344555556677778888899999999999999999999999999999998876665555444433
No 232
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.40 E-value=0.017 Score=56.57 Aligned_cols=68 Identities=15% Similarity=0.096 Sum_probs=51.1
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC
Q psy13668 154 WGKIATSAPVIGLIIAQIGHDFGLFTIVT-DLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR 224 (513)
Q Consensus 154 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~-~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~ 224 (513)
++.+.+|++++.+.++..+.-..+|.+.. |.|..-.+. ....-|++.+......++|+.+..++..|.
T Consensus 237 ~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~---~~~P~GlIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 237 WRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDD---EELPLGLIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCC---CCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35677889999999999998899888766 777764211 223478888888899999998887655543
No 233
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.37 E-value=0.00011 Score=62.11 Aligned_cols=67 Identities=27% Similarity=0.348 Sum_probs=51.3
Q ss_pred ccccccccC-CCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q psy13668 380 PSLKVNALD-LSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITN 458 (513)
Q Consensus 380 ~~~~~~~~~-~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~ 458 (513)
+.......| .++++++++.++.+....++..++|.+.+.+.+. . +|+..|.+.+.+.+++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~---------------~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 70 VAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF---L---------------GWRAPFLFLAILALAAF 131 (141)
T ss_pred HhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc---c---------------chHHHHHHHHHHHHHHH
Confidence 334343444 5667899999999999999999999999988654 2 78889998888877776
Q ss_pred HHHHhh
Q psy13668 459 IIYCFM 464 (513)
Q Consensus 459 ~~~~~~ 464 (513)
+....+
T Consensus 132 ~~~~~~ 137 (141)
T TIGR00880 132 ILLAFL 137 (141)
T ss_pred HHHhhc
Confidence 665543
No 234
>KOG2533|consensus
Probab=97.27 E-value=0.00028 Score=73.27 Aligned_cols=76 Identities=14% Similarity=0.125 Sum_probs=57.2
Q ss_pred cccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHH
Q psy13668 383 KVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYC 462 (513)
Q Consensus 383 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~ 462 (513)
..+...+.++++|..+|+.+...++|+++|..+...+.+..+. ....|||+.|++.+++.++..++..
T Consensus 157 ~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~------------~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 157 AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS------------GGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC------------CCcCCceeehhHHHHHHHHHHheEE
Confidence 3344567899999999999999999999999998887552111 1123999999999999888777766
Q ss_pred hhcccccc
Q psy13668 463 FMGSGEIQ 470 (513)
Q Consensus 463 ~~~~~~~~ 470 (513)
++.+..+.
T Consensus 225 ~~lp~~P~ 232 (495)
T KOG2533|consen 225 FFLPDNPS 232 (495)
T ss_pred EEecCChh
Confidence 65555543
No 235
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.25 E-value=0.0021 Score=66.33 Aligned_cols=230 Identities=14% Similarity=0.046 Sum_probs=117.5
Q ss_pred hHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhh
Q psy13668 77 IGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGK 156 (513)
Q Consensus 77 ~g~~~~~~~~~~l~~~~~gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (513)
+|.+++..++|.+.+.. +.|..|.+.+.+..+..+...++.+|+++. +..+.+.. .+++.+......+......++
T Consensus 135 ~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 210 (433)
T PF03092_consen 135 VGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIVALFLLEERKVR-PADEVFSF--GKEEVPCLFGSFREQLSELWR 210 (433)
T ss_pred HHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHHHHHhhhhcccc-ccchhhcc--cccccchhhHHHHHHHHHHHH
Confidence 56777777888888887 899999887777666655555555542211 11100000 000000000000001123355
Q ss_pred hccchhHHHHHH-HHHHHHHHHHHHHhhHHHHHHHhcC---cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668 157 IATSAPVIGLII-AQIGHDFGLFTIVTDLPKYMKDVLH---FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS 232 (513)
Q Consensus 157 ~l~~~~~~~~~l-~~~~~~~~~~~~~~~lp~~l~~~~g---~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 232 (513)
.++.+.+|...+ ..++.......-....-.+..+..+ +|+...+.+..+..++.++|..+..+...+..-|++...
T Consensus 211 ~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~ 290 (433)
T PF03092_consen 211 ALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVV 290 (433)
T ss_pred HHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 666777776555 2222111111000000001123345 888888888878888888888887766555555665555
Q ss_pred hhHHHHHHHHHHH-hcC--------ChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhHHHHHHHHHHHhHHhhHH
Q psy13668 233 ASVGPGLGILAAS-YSG--------CNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAGTLMALVGGIGALSGTVS 302 (513)
Q Consensus 233 ~~~~~~~~~~~l~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~i~~~ig 302 (513)
..+..++..+.-. ... ++.+..+.--.+.-......+-+......++.| ..-|+..|+...+.|+|..++
T Consensus 291 t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s 370 (433)
T PF03092_consen 291 TTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVS 370 (433)
T ss_pred HHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHH
Confidence 4444443332211 110 011111111111122233333344455666665 459999999999999999888
Q ss_pred HHHHHHhc
Q psy13668 303 PYLVGVLT 310 (513)
Q Consensus 303 p~l~g~l~ 310 (513)
..+...+.
T Consensus 371 ~~lg~~l~ 378 (433)
T PF03092_consen 371 STLGAFLM 378 (433)
T ss_pred HHHHHHHH
Confidence 77665444
No 236
>KOG3762|consensus
Probab=97.23 E-value=0.00075 Score=68.79 Aligned_cols=86 Identities=14% Similarity=-0.006 Sum_probs=52.2
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhH
Q psy13668 156 KIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASV 235 (513)
Q Consensus 156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 235 (513)
.++.++.....++...+...+.-.+.+++=-+++|. +-.+.-.|........+-++.-+..+++.+|+|+-+++..++.
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa 444 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLA 444 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhh
Confidence 345566665555555555555555566664455654 5555555655555556666777778888888888777666555
Q ss_pred HHHHHHH
Q psy13668 236 GPGLGIL 242 (513)
Q Consensus 236 ~~~~~~~ 242 (513)
+.++=++
T Consensus 445 ~~~~Rf~ 451 (618)
T KOG3762|consen 445 CNVGRFL 451 (618)
T ss_pred HHHHHHH
Confidence 4444333
No 237
>KOG0569|consensus
Probab=97.06 E-value=0.01 Score=61.26 Aligned_cols=119 Identities=11% Similarity=-0.046 Sum_probs=78.8
Q ss_pred HHHhcCcchhh------hhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC--ChhHHHHHHHH
Q psy13668 188 MKDVLHFSITS------VDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG--CNRLAVTVSFT 259 (513)
Q Consensus 188 l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~ 259 (513)
+.+++|.+.++ -+...+...+++++|++..+.++||+|||..+....+...++.+++.... ......++.=.
T Consensus 45 ~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~ 124 (485)
T KOG0569|consen 45 LIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRL 124 (485)
T ss_pred HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34556633322 24566778899999999999999999999877776666665555444332 22222222222
Q ss_pred HHHHHHhhhhhhHHHhhcccCcch-hHHHHHHHHHHHhHHhhHHHHHH
Q psy13668 260 LGMGTMGAFLPSLKVNALDLSPNY-AGTLMALVGGIGALSGTVSPYLV 306 (513)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~gi~~~~~~i~~~igp~l~ 306 (513)
+.....+...........|.+|++ ||....+......+|..++..+.
T Consensus 125 i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~ 172 (485)
T KOG0569|consen 125 IVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG 172 (485)
T ss_pred HHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 222234555556677778999865 99999999988888888875443
No 238
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.00 E-value=0.02 Score=56.21 Aligned_cols=63 Identities=11% Similarity=-0.015 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC--cchhhhhHHhchhHHHHHHHHHhhhhhcCC
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH--FSITSVDLISGWPNRSVIVTYKMRTILSGP 223 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g--~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr 223 (513)
..+....+..++...+.-...+-.-.|..+.-. ......++......++..++..+.+.+..+
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~ 72 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILS 72 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 356667777777777777777777777765421 123456677788888999999999988855
No 239
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.90 E-value=0.024 Score=52.90 Aligned_cols=203 Identities=12% Similarity=0.074 Sum_probs=96.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccchhhhhccCCCCCCchhhhccchhHHHHHHHHHHHH
Q psy13668 95 GWTSVFYVFGAVGLAWFALWMTFASSDPSESTHYVAYGTAVMHKSNRFIFSFQNLPPTPWGKIATSAPVIGLIIAQIGHD 174 (513)
Q Consensus 95 gWr~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~ 174 (513)
.|++++.+.+++.++.+++..++=.+- +.. .++|++...+....++....+++|++..|...+.+....
T Consensus 39 ~W~~I~si~~lL~~IpLIly~ifGk~f--d~~---------~~~~k~~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 39 NWQWILSIFILLIFIPLILYIIFGKNF--DIY---------SPKEKQEKENSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc--ccc---------CcccccccccccccccchHHHHHccchHHHHHHHHHHHh
Confidence 699999988888777666665552221 111 111111101111223355688999998887666544321
Q ss_pred HHHHHHHhhHHHHHHHhcCcchh-------------hhhHHhchhHHHHHHHHHhhhhhcCCC-cccchhhH----hhHH
Q psy13668 175 FGLFTIVTDLPKYMKDVLHFSIT-------------SVDLISGWPNRSVIVTYKMRTILSGPR-LTSPFDFS----ASVG 236 (513)
Q Consensus 175 ~~~~~~~~~lp~~l~~~~g~s~~-------------~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~----~~~~ 236 (513)
...+....+.+..+....|+. ...........+..+|.+..|..+... .||+.+.. +.+.
T Consensus 108 --v~~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~ 185 (267)
T PF07672_consen 108 --VVVVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVF 185 (267)
T ss_pred --eeEEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHH
Confidence 111112223443322222221 112333334445556666677776654 45544332 1222
Q ss_pred HHHHHHHHHhcCChhH---HHHHHHH-HHHHHHhhhhhhHHHhhccc---CcchhHHHHHHHHHHHhHHhhHHHHHHHHh
Q psy13668 237 PGLGILAASYSGCNRL---AVTVSFT-LGMGTMGAFLPSLKVNALDL---SPNYAGTLMALVGGIGALSGTVSPYLVGVL 309 (513)
Q Consensus 237 ~~~~~~~l~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~p~~~g~~~gi~~~~~~i~~~igp~l~g~l 309 (513)
.++..+.......+.. .....+. ++..+.-...+....+..|. .|++.|...|+.-.++++.-.+.-.+.+.+
T Consensus 186 ~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i 265 (267)
T PF07672_consen 186 FVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVI 265 (267)
T ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222222212222221 1111111 22222223333444444443 488899999999988888776666555544
Q ss_pred c
Q psy13668 310 T 310 (513)
Q Consensus 310 ~ 310 (513)
.
T Consensus 266 ~ 266 (267)
T PF07672_consen 266 A 266 (267)
T ss_pred c
Confidence 3
No 240
>KOG0254|consensus
Probab=96.86 E-value=0.0094 Score=63.10 Aligned_cols=112 Identities=16% Similarity=0.094 Sum_probs=86.9
Q ss_pred hhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhc
Q psy13668 198 SVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNAL 277 (513)
Q Consensus 198 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (513)
+.+++.+...++..++.+..|+++|++|||+.+..+.+...++.++.....+.......-+..+++ .+...........
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g-~G~~~~~~piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLG-VGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccc-hhhhhhcchhhHh
Confidence 347899999999999999999999999999999999999999888888877555545444544443 3333455677788
Q ss_pred ccCcc-hhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 278 DLSPN-YAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 278 ~~~p~-~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
|+.|. .||...+..+....+|..++ .+.+...+
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~ 202 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTS 202 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhc
Confidence 88875 69999999998888777777 55555553
No 241
>KOG2563|consensus
Probab=96.77 E-value=0.008 Score=60.31 Aligned_cols=129 Identities=16% Similarity=0.006 Sum_probs=86.6
Q ss_pred HHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCCh---hHHHHHHHHH
Q psy13668 184 LPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCN---RLAVTVSFTL 260 (513)
Q Consensus 184 lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~ 260 (513)
+..+.++.+| +...+-++..++.+..+.-.+.+-|+.||+|-|.....+.....++..+-.....+ ...--.+...
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~ 145 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHT 145 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHH
Confidence 4456777778 66667778888888999999999999999999999998888888877664433222 1111112222
Q ss_pred HHHHHhhhhhhHHH-----hhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 261 GMGTMGAFLPSLKV-----NALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 261 ~~~~~~~~~~~~~~-----~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
+-...+...+.... ...-+.|++|+++..+......+|.+++-.+-..+..+.
T Consensus 146 Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 146 GQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred hHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 22223333332222 222344789999999988888888888877777776655
No 242
>KOG2325|consensus
Probab=96.75 E-value=0.023 Score=58.37 Aligned_cols=83 Identities=10% Similarity=-0.027 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-cCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcc-cchhhHhhHHHHH
Q psy13668 162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDV-LHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLT-SPFDFSASVGPGL 239 (513)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~~~~~~~~~~~ 239 (513)
..++..+..++....+..+..-.-.|+++. .+-+.+..|+..+...++.++.++..|+-+.|.++ |+.++.+.+.+.+
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~ 114 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAII 114 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHH
Confidence 345555555555544444444455666641 35667788999999999999999999999999874 5555666666666
Q ss_pred HHHHH
Q psy13668 240 GILAA 244 (513)
Q Consensus 240 ~~~~l 244 (513)
+.++.
T Consensus 115 g~llY 119 (488)
T KOG2325|consen 115 GNLLY 119 (488)
T ss_pred HHHHH
Confidence 55444
No 243
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.75 E-value=0.13 Score=52.71 Aligned_cols=49 Identities=22% Similarity=0.455 Sum_probs=41.0
Q ss_pred hhhhhhhh----hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHH
Q psy13668 9 VMLHRLVN----EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFG 58 (513)
Q Consensus 9 ~~~~~~~~----~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g 58 (513)
++++|.++ +|.+..++.+.+-.+|+.++|++.+++.+++ ||+..|-..+
T Consensus 140 ~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g~~~gF~~aa 192 (498)
T COG3104 140 SLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-GWHVGFGLAA 192 (498)
T ss_pred HHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-CHHHHHHHHH
Confidence 56777773 4556688888888999999999999999999 9999997654
No 244
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.58 E-value=0.00054 Score=72.37 Aligned_cols=73 Identities=15% Similarity=0.079 Sum_probs=0.0
Q ss_pred HHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhc
Q psy13668 175 FGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYS 247 (513)
Q Consensus 175 ~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~ 247 (513)
....++..-.-+-++.+++++..++|++.+..-++.++..+...+..+|..|-+++..+.++.+++.+++...
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lP 88 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALP 88 (539)
T ss_dssp -------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhcc
Confidence 3344444444455688899999999999999999999999999999999888888888888888887776655
No 245
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.54 E-value=0.034 Score=57.44 Aligned_cols=128 Identities=16% Similarity=0.158 Sum_probs=78.4
Q ss_pred HHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-----cccchhhHhhHHHHHHHHHHHhcCC---hhHHHHH
Q psy13668 185 PKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-----LTSPFDFSASVGPGLGILAASYSGC---NRLAVTV 256 (513)
Q Consensus 185 p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~ 256 (513)
-.|+++.+|+++.+...+.....+... ..++.|.++|-+ .||+-+.++.++..++...+...+. +......
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 357889999999988777666555444 367899999985 2444455566655555554444433 2223323
Q ss_pred HHHHHHHHHhhhhhhHHHhhccc---CcchhHHHHHHHHHHHhHHhhHHHHHHHHhccch
Q psy13668 257 SFTLGMGTMGAFLPSLKVNALDL---SPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNW 313 (513)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~---~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~ 313 (513)
++.+............-....|. .|+.+|..-+.......+|+.++..+.|.+.+..
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~ 151 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF 151 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC
Confidence 32222222222222222233333 3555888888889999999999999988887753
No 246
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.51 E-value=1.1 Score=45.31 Aligned_cols=146 Identities=6% Similarity=-0.106 Sum_probs=83.5
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh--cCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhH
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDV--LHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFS 232 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 232 (513)
++..+++.++.-.+=..+..++++-+.+|......+. .+-+..-.|..-....+.+.++.+..|++..++.+..-...
T Consensus 241 ~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l 320 (412)
T PF01770_consen 241 KSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELAL 320 (412)
T ss_pred HHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHH
Confidence 4455677776666666677777888888887777765 12233345667777778888899999999666655443333
Q ss_pred hhH--HHHHHHHHHHhcCChhHHHHHHHH-HHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhH
Q psy13668 233 ASV--GPGLGILAASYSGCNRLAVTVSFT-LGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTV 301 (513)
Q Consensus 233 ~~~--~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~i 301 (513)
+.+ ..+.+++++.+..+ .+......+ ................+..+..+.-|.+.|+++++..+-..+
T Consensus 321 ~~~S~l~a~~L~lm~~t~~-Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 321 GVFSLLQAGLLFLMSFTGN-IWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred HHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 333 33333333433332 222222222 222222222223344555556677888999888876554433
No 247
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.47 E-value=1.2 Score=45.07 Aligned_cols=41 Identities=15% Similarity=0.051 Sum_probs=28.4
Q ss_pred Hhhhhhh-HHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668 265 MGAFLPS-LKVNALDLSPNYAGTLMALVGGIGALSGTVSPYL 305 (513)
Q Consensus 265 ~~~~~~~-~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l 305 (513)
.|..+.+ +.....+..+++|..++|.....-.+|-.++..+
T Consensus 349 GGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll 390 (402)
T PF02487_consen 349 GGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLL 390 (402)
T ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3444444 4455556678899999999988888777666544
No 248
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.39 E-value=0.014 Score=63.15 Aligned_cols=135 Identities=13% Similarity=0.043 Sum_probs=97.9
Q ss_pred HHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC-CcccchhhHhhHHHHHHHHHHHhcCCh----
Q psy13668 176 GLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP-RLTSPFDFSASVGPGLGILAASYSGCN---- 250 (513)
Q Consensus 176 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 250 (513)
++|++...+..|+.+.+|++..++..+........-+..+++|+++|+ +|+++.+..+.++..++..++......
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~ 81 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH 81 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc
Confidence 356677777888888899999998888888888888889999999998 688888888888877777766553211
Q ss_pred ---hHHHHHHHHHHHHHHhhhhhhHHHhhcccCc----chhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 251 ---RLAVTVSFTLGMGTMGAFLPSLKVNALDLSP----NYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 251 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
....+..+.++.++.+..-+.......|..+ +.+-....+.+...++|+.+++.+.+.+-
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILR 148 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122233334444455555666655555552 23777888899999999999999888775
No 249
>KOG2325|consensus
Probab=96.35 E-value=0.11 Score=53.56 Aligned_cols=59 Identities=17% Similarity=0.296 Sum_probs=45.0
Q ss_pred CCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHhh
Q psy13668 388 DLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFM 464 (513)
Q Consensus 388 ~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~ 464 (513)
.+.|+.+++..|.+...++.+..++|.+...+.... |.+++..+..++.++...+...+
T Consensus 416 iLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~------------------g~~~v~~~~~~~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 416 ILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS------------------GPRPVWIILLCLLLVVAALWIVF 474 (488)
T ss_pred HhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc------------------CccHHHHHHHHHHHHHHHHHHHH
Confidence 467999999999999999999999998877775543 66677777777666666554443
No 250
>KOG3626|consensus
Probab=96.24 E-value=0.029 Score=60.26 Aligned_cols=87 Identities=10% Similarity=-0.023 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
+.+..+.....+......++..-.-+-++++++++..+.|++...+-+++.+......+...|.-|-+++..+.+.++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG 175 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence 44444443333333444455555566778899999999999999999999999999999999999999999999988888
Q ss_pred HHHHHhc
Q psy13668 241 ILAASYS 247 (513)
Q Consensus 241 ~~~l~~~ 247 (513)
.++..+.
T Consensus 176 sll~alP 182 (735)
T KOG3626|consen 176 SLLFALP 182 (735)
T ss_pred HHHHhCh
Confidence 7777655
No 251
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.22 E-value=0.021 Score=43.70 Aligned_cols=77 Identities=13% Similarity=0.043 Sum_probs=62.6
Q ss_pred HHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChh
Q psy13668 174 DFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNR 251 (513)
Q Consensus 174 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 251 (513)
..+-+.+...+|...+| .++|..+.+.+.+.+.++-++|.+...++.++..+++....+.+...+.+..+...++..
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 34456666677776655 699999999999999999999999999999998888888888888888777777665543
No 252
>KOG0252|consensus
Probab=96.07 E-value=0.0033 Score=63.06 Aligned_cols=102 Identities=13% Similarity=0.033 Sum_probs=70.0
Q ss_pred cchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC--Chh-HHHH----HHHHHHHHHHh
Q psy13668 194 FSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG--CNR-LAVT----VSFTLGMGTMG 266 (513)
Q Consensus 194 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~--~~~-~~~~----~~~~~~~~~~~ 266 (513)
++....+.......++.++|++..|++.||+|||++....++++.++.+...... +.. ..+. .-+.++.+ .+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiG-IG 159 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIG-IG 159 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcc-cc
Confidence 5566678888889999999999999999999999999998888888887544332 222 1111 12223322 34
Q ss_pred hhhhhHHHhhcccCc-chhHHHHHHHHHHHh
Q psy13668 267 AFLPSLKVNALDLSP-NYAGTLMALVGGIGA 296 (513)
Q Consensus 267 ~~~~~~~~~~~~~~p-~~~g~~~gi~~~~~~ 296 (513)
.=+|...+..+|.+. +.||.-.+..-..+.
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg 190 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFAMQG 190 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEEecc
Confidence 556667777888885 458877665444333
No 253
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.01 E-value=0.37 Score=47.47 Aligned_cols=80 Identities=10% Similarity=-0.037 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLG 240 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 240 (513)
+++...........+..-.+.. ..| +.+|++..+.+.+.......+.+-..+.|.++||+|||+..+...+...++
T Consensus 37 r~yl~vY~La~~aDWLQGpY~Y--~LY--~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~s 112 (354)
T PF05631_consen 37 RKYLLVYLLAMAADWLQGPYLY--ALY--ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLS 112 (354)
T ss_pred HHHHHHHHHHHHHHHhhcchhH--HHH--HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 5566555555555555433222 223 458999999999999999999999999999999999999988877777777
Q ss_pred HHHH
Q psy13668 241 ILAA 244 (513)
Q Consensus 241 ~~~l 244 (513)
++..
T Consensus 113 cl~k 116 (354)
T PF05631_consen 113 CLTK 116 (354)
T ss_pred HHHH
Confidence 7543
No 254
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.00 E-value=0.28 Score=46.74 Aligned_cols=131 Identities=18% Similarity=0.074 Sum_probs=81.6
Q ss_pred HhhHHHHHHHhcCcch--hhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC-hhHHHHHH
Q psy13668 181 VTDLPKYMKDVLHFSI--TSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC-NRLAVTVS 257 (513)
Q Consensus 181 ~~~lp~~l~~~~g~s~--~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 257 (513)
....+.+..+. +.+. ...+.......+...++.+..|.+.||.|||+....+.....++.+....... ........
T Consensus 22 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (338)
T COG0477 22 SPALPLLLSTL-SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLIL 100 (338)
T ss_pred HHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 33455555543 4343 46788888888888888899999999999986666665543444334444433 12222222
Q ss_pred HHHHHHHHhhhhhhHHHhhcccCcc--hhHHHHHHHHH-HHhHHhhHHHHHHHHhccc
Q psy13668 258 FTLGMGTMGAFLPSLKVNALDLSPN--YAGTLMALVGG-IGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~p~--~~g~~~gi~~~-~~~i~~~igp~l~g~l~~~ 312 (513)
........+...+.......+..|+ +++...+.... ...++..++|.+.+.+...
T Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 101 RLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211122334555666677777774 78888888888 5777888888666665543
No 255
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.19 E-value=0.09 Score=53.78 Aligned_cols=71 Identities=10% Similarity=-0.019 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHh
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSA 233 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 233 (513)
.+.+....++..+.--.+.+-.|.++.+.+.-+..-.+.+...-.+..++..+..|...||..|.+.....
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~ 74 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTS 74 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHH
Confidence 45667777777888888888899999988765666667777777788888888999999999998876653
No 256
>KOG2816|consensus
Probab=94.61 E-value=0.2 Score=51.92 Aligned_cols=102 Identities=16% Similarity=0.084 Sum_probs=74.6
Q ss_pred HHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCc-chhH
Q psy13668 207 NRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSP-NYAG 285 (513)
Q Consensus 207 ~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g 285 (513)
++..++.++..|.++||+|||..+....+...+....+.+.. ++..+ +.-..+......+...+...|... ++|.
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~---~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG---YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH---HHHhh-hcccccchhhhhhhhhhheeeccchhHHH
Confidence 677888999999999999999988877776666555554443 22222 222233344555566777777774 6799
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHHhccc
Q psy13668 286 TLMALVGGIGALSGTVSPYLVGVLTPN 312 (513)
Q Consensus 286 ~~~gi~~~~~~i~~~igp~l~g~l~~~ 312 (513)
...|+.+.....+..++|.+.+.+.+.
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~ 174 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKF 174 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 999999999999999999999988764
No 257
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.44 E-value=7.2 Score=40.57 Aligned_cols=84 Identities=7% Similarity=0.006 Sum_probs=45.4
Q ss_pred CchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh---hhHHhchhHHHHHHHHHhhhhhcCCCcccc
Q psy13668 152 TPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS---VDLISGWPNRSVIVTYKMRTILSGPRLTSP 228 (513)
Q Consensus 152 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~---~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 228 (513)
.+++.++++|-...+++...+.+.....+..-.-..+++.+--+.+. .+......++..++..++.+++.+|+|-+.
T Consensus 255 es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~ 334 (472)
T TIGR00769 255 ESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLT 334 (472)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 35567788887776666655554444333332223334433211112 233444555566666666788888888765
Q ss_pred hhhHhhH
Q psy13668 229 FDFSASV 235 (513)
Q Consensus 229 ~~~~~~~ 235 (513)
...+.-+
T Consensus 335 ~a~i~Pi 341 (472)
T TIGR00769 335 AALITPL 341 (472)
T ss_pred HHHHHHH
Confidence 5544333
No 258
>PRK03612 spermidine synthase; Provisional
Probab=94.00 E-value=1.3 Score=46.85 Aligned_cols=143 Identities=15% Similarity=-0.081 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHH---HHHHHH
Q psy13668 168 IAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPG---LGILAA 244 (513)
Q Consensus 168 l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~---~~~~~l 244 (513)
+..++...+...+.....-.+...+|-+....+.+.+.+..+..+|+.+++++.++..++.. ..-..+.. ++..++
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll 99 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALIL 99 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 33444455555555555566666788888999999999999999999998887643322221 11111111 111111
Q ss_pred HhcC--Ch-hHHHH-HHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 245 SYSG--CN-RLAVT-VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 245 ~~~~--~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
.... .. ..... .+......+.|...|.......+...++.|...|-.+....+|+++|..+.+.++-
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 100 YAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 1100 00 11111 11122223344555554444444333456777888888888888888888877654
No 259
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=93.47 E-value=1.7 Score=45.05 Aligned_cols=144 Identities=12% Similarity=0.011 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcc-----hhhhhHHhchhHHHHHHH-HHhhhhhcCCCcccchhhHhhH
Q psy13668 162 PVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFS-----ITSVDLISGWPNRSVIVT-YKMRTILSGPRLTSPFDFSASV 235 (513)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s-----~~~~~~~~~~~~~~~~ig-~~~~g~l~dr~~~~~~~~~~~~ 235 (513)
++....+..|+....++. ---++|....+ .+....+.+...+...+. .++.+++++|..|+++.-....
T Consensus 8 k~~~~~l~fF~il~~Y~i-----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTI-----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHH-----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 444455555554444332 23457776663 245666666666666655 7889999999999987654333
Q ss_pred HHHHHHHHHHhc---CCh---------------------------hHHHHHHHHHHHHHHhhhhh-hHHHhhcccC-cch
Q psy13668 236 GPGLGILAASYS---GCN---------------------------RLAVTVSFTLGMGTMGAFLP-SLKVNALDLS-PNY 283 (513)
Q Consensus 236 ~~~~~~~~l~~~---~~~---------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-p~~ 283 (513)
.......++... ... .|....+....-.......+ .++..+.|+. +++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 333222222111 100 11222222233333344444 6788899998 577
Q ss_pred hHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 284 AGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 284 ~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
..+-.++....+++|..+++.+...+.
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987765
No 260
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.15 E-value=0.59 Score=47.27 Aligned_cols=70 Identities=11% Similarity=-0.058 Sum_probs=48.9
Q ss_pred HHhhHHHHHHHh-cCcchhhhhHHhchhHH-HHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCC
Q psy13668 180 IVTDLPKYMKDV-LHFSITSVDLISGWPNR-SVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGC 249 (513)
Q Consensus 180 ~~~~lp~~l~~~-~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~ 249 (513)
...++..|+.+. .|++..+..--.-+... ..++.-+....+.|..+.|++++...+...+...++.+..+
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s 93 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS 93 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc
Confidence 344677888876 88988887654444443 44555667888999999999988877776666665555543
No 261
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=92.74 E-value=3.3 Score=35.94 Aligned_cols=109 Identities=12% Similarity=-0.016 Sum_probs=67.6
Q ss_pred HHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccC
Q psy13668 201 LISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLS 280 (513)
Q Consensus 201 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
.-..+......+.+++...+.++.|.|+.++++.++..+......+.. .+.........+++ .+..+........+..
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~-~~~l~~~s~l~G~~-~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPN-SYTLYPASALLGFG-AALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHhhh-hHHhhHhhhHHHHHcC
Confidence 345555666777888888899999999998888887776555544332 22222222222333 2333333333344444
Q ss_pred -cchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 281 -PNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 281 -p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
++.+++-.++...+.+.+..+|..+.-.+.+
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4568888999888888888888776655443
No 262
>KOG0637|consensus
Probab=92.00 E-value=0.71 Score=46.85 Aligned_cols=143 Identities=16% Similarity=0.130 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC----Cccc-chhhHhhHHH
Q psy13668 163 VIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP----RLTS-PFDFSASVGP 237 (513)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~-~~~~~~~~~~ 237 (513)
........+...+++-.=..++|+|+++ .|.+....+..-...-+.+++.+++.|..+|| +||| +.+..+.+..
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i 112 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLI 112 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHH
Confidence 3444444444445544556689999987 59999988888888888899999999999998 5655 5566666777
Q ss_pred HHHHHHHHhcC--------C----hhHHHHHHHHHHHHHHh----hhhhhHHHhhcccC-cchhHH-HHHHHHHHHhHHh
Q psy13668 238 GLGILAASYSG--------C----NRLAVTVSFTLGMGTMG----AFLPSLKVNALDLS-PNYAGT-LMALVGGIGALSG 299 (513)
Q Consensus 238 ~~~~~~l~~~~--------~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-p~~~g~-~~gi~~~~~~i~~ 299 (513)
++.++++.+.. + .....+..+.+++...- ......-+...|+. ++++-+ +.+...++..+|+
T Consensus 113 ~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGn 192 (498)
T KOG0637|consen 113 AVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGN 192 (498)
T ss_pred HHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcc
Confidence 77776665432 1 12244555555554432 33445556667776 444444 8888777777777
Q ss_pred hHHHHHH
Q psy13668 300 TVSPYLV 306 (513)
Q Consensus 300 ~igp~l~ 306 (513)
.+|-.+.
T Consensus 193 vLGY~~g 199 (498)
T KOG0637|consen 193 VLGYALG 199 (498)
T ss_pred eeeeecc
Confidence 6665444
No 263
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=89.25 E-value=1.2 Score=48.48 Aligned_cols=91 Identities=12% Similarity=0.101 Sum_probs=59.6
Q ss_pred HHHHhhhcccccccccccccccCCC-CC---ccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhcccccc
Q psy13668 366 VSFTLGMGTMGAFLPSLKVNALDLS-PN---YAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLL 441 (513)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 441 (513)
..+.+.....|.+-+...+...|.. ++ .+-+...+.....++|+++++.+.+.+.+.... ++...
T Consensus 90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~-----------fg~~~ 158 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC-----------FGCQD 158 (654)
T ss_pred HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----------cccCc
Confidence 3444444555566666666554422 22 356677888888999999999888877533100 00111
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccc
Q psy13668 442 EWRVVFWTAFFVMLITNIIYCFMGSG 467 (513)
Q Consensus 442 ~~~~~f~~~a~~~~~~~~~~~~~~~~ 467 (513)
+|+.+|.+.+++++++.+++....+.
T Consensus 159 ~~~~aF~i~~i~m~ia~lvf~~g~k~ 184 (654)
T TIGR00926 159 CYPLAFGVPAILMILALIVFMAGSKM 184 (654)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccc
Confidence 79999999999999999887664443
No 264
>KOG3762|consensus
Probab=88.96 E-value=0.17 Score=52.27 Aligned_cols=68 Identities=12% Similarity=0.030 Sum_probs=52.6
Q ss_pred HHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHH-HHHHHH
Q psy13668 176 GLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPG-LGILAA 244 (513)
Q Consensus 176 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~-~~~~~l 244 (513)
.+-.+...++.|+.+ +|+++.+.|.+...--+..+++.+++|.++||+.+||....+..+.. ...+++
T Consensus 26 ~~g~l~pll~vy~kQ-LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll 94 (618)
T KOG3762|consen 26 RFGSLFPLLAVYFKQ-LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLL 94 (618)
T ss_pred cccccchHHHHHHHH-cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhe
Confidence 334455677888876 69999999999999999999999999999999987766666555444 333443
No 265
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=86.80 E-value=44 Score=35.05 Aligned_cols=78 Identities=8% Similarity=0.030 Sum_probs=39.4
Q ss_pred chhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhh---hhHHhchhHHHHHHHHHhhhhhcCCCcccch
Q psy13668 153 PWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITS---VDLISGWPNRSVIVTYKMRTILSGPRLTSPF 229 (513)
Q Consensus 153 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~---~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 229 (513)
+++.++++|-...+++...+.+.....+....-..+++.+--+.+- .|-.....++..++-..+++.+.+|.|-+..
T Consensus 272 s~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~ 351 (491)
T PF03219_consen 272 SFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTA 351 (491)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 4566777777776666665555544444433334444433222111 2333444455555555666666666554443
Q ss_pred h
Q psy13668 230 D 230 (513)
Q Consensus 230 ~ 230 (513)
.
T Consensus 352 A 352 (491)
T PF03219_consen 352 A 352 (491)
T ss_pred H
Confidence 3
No 266
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=85.56 E-value=1 Score=42.53 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=27.3
Q ss_pred CCCCccchhhhhhhhhhhcccccccceeeeecCC
Q psy13668 389 LSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 422 (513)
Q Consensus 389 ~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~ 422 (513)
-.|++||++.|+.-....+++++-..+...+.++
T Consensus 124 NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 124 NFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred hCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 4478999999999999888888777776666665
No 267
>KOG3810|consensus
Probab=85.31 E-value=34 Score=33.95 Aligned_cols=143 Identities=6% Similarity=-0.126 Sum_probs=77.2
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCc-chhhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhh
Q psy13668 156 KIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHF-SITSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSAS 234 (513)
Q Consensus 156 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~ 234 (513)
...+||+...-.+=..+..+++|-+..+......+..-- ...--|..-....+.++++.+..|++.-.+.|..-...+.
T Consensus 229 ~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~ 308 (433)
T KOG3810|consen 229 ECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAV 308 (433)
T ss_pred HHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHH
Confidence 345666665555555666777888887777777665311 1122344555667778888899999988777664333332
Q ss_pred --HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHH
Q psy13668 235 --VGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALS 298 (513)
Q Consensus 235 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~ 298 (513)
...+-+++.+.....-+.-......................+.++..|.-|...|+++++.-+-
T Consensus 309 ~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~l 374 (433)
T KOG3810|consen 309 GSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALIL 374 (433)
T ss_pred HHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHH
Confidence 3333333333333331111111111111112222222345556666778888888887775443
No 268
>KOG3098|consensus
Probab=84.69 E-value=25 Score=36.37 Aligned_cols=148 Identities=12% Similarity=-0.022 Sum_probs=86.5
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHh--cCcch-hhhhHHhchhHHHHHHHHHhhhhhcCC---Ccccc
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDV--LHFSI-TSVDLISGWPNRSVIVTYKMRTILSGP---RLTSP 228 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~--~g~s~-~~~~~~~~~~~~~~~ig~~~~g~l~dr---~~~~~ 228 (513)
-+.+++++...+....+..+.....+....|+-+.-. .+.+. .-.++.....+.+..++....+.+++| +|+++
T Consensus 234 ~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~ 313 (461)
T KOG3098|consen 234 FKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKP 313 (461)
T ss_pred HHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCc
Confidence 3456778887777776666565555666666665433 22222 234555666777888888888888877 56777
Q ss_pred hhhHhhHHHHHHHHHHHh-cC-Ch--------------hHHHHHHHHHHHHH-HhhhhhhHHHhhcccCcchhHHHHHHH
Q psy13668 229 FDFSASVGPGLGILAASY-SG-CN--------------RLAVTVSFTLGMGT-MGAFLPSLKVNALDLSPNYAGTLMALV 291 (513)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~-~~-~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~g~~~gi~ 291 (513)
....+.++..++.++... .+ +. .......+....+. -..........+.++.|++|..+.++.
T Consensus 314 ~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~ 393 (461)
T KOG3098|consen 314 TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLF 393 (461)
T ss_pred chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 776666655554443321 11 11 01111122222222 234444556667777799998888887
Q ss_pred HHHHhHHhhHH
Q psy13668 292 GGIGALSGTVS 302 (513)
Q Consensus 292 ~~~~~i~~~ig 302 (513)
-.-..+++.++
T Consensus 394 kfyq~~~s~v~ 404 (461)
T KOG3098|consen 394 KFYQSVASCVA 404 (461)
T ss_pred HHHHHHHHHHH
Confidence 77776666554
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=81.92 E-value=31 Score=35.68 Aligned_cols=106 Identities=11% Similarity=-0.173 Sum_probs=48.0
Q ss_pred hHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcC-----------ChhHHHHHHHHHHHHHHhhh
Q psy13668 200 DLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSG-----------CNRLAVTVSFTLGMGTMGAF 268 (513)
Q Consensus 200 ~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~~~~~~~~~~~~~ 268 (513)
-.......++-.+|+.+..+..-...+.+.+.+..+.-.+...++.... .+.+...+...+....+|..
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~ 389 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL 389 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeEeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence 3556667788888888665432111111233333333333332222211 11122222222212223333
Q ss_pred hhhHHHh-hcccCcchhHHHHHHHHHHHhHHhhHHHHH
Q psy13668 269 LPSLKVN-ALDLSPNYAGTLMALVGGIGALSGTVSPYL 305 (513)
Q Consensus 269 ~~~~~~~-~~~~~p~~~g~~~gi~~~~~~i~~~igp~l 305 (513)
....... ...+.+++|..+..+....-.+|-.+|..+
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333332 333446677777777776666666666544
No 270
>KOG1479|consensus
Probab=81.54 E-value=64 Score=32.71 Aligned_cols=47 Identities=13% Similarity=-0.013 Sum_probs=28.6
Q ss_pred hHHHHHHHhcCcc---hhhhhHHhch-hHHHHHHHHHhhhhhcCCCcccch
Q psy13668 183 DLPKYMKDVLHFS---ITSVDLISGW-PNRSVIVTYKMRTILSGPRLTSPF 229 (513)
Q Consensus 183 ~lp~~l~~~~g~s---~~~~~~~~~~-~~~~~~ig~~~~g~l~dr~~~~~~ 229 (513)
-.|.+..+..+-. ..-..+.... ..+...+|.+...+..++-.|+..
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~ 315 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLT 315 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceeh
Confidence 5678877664322 2233344444 677888888888877776655433
No 271
>KOG3574|consensus
Probab=78.37 E-value=80 Score=31.91 Aligned_cols=155 Identities=12% Similarity=-0.028 Sum_probs=87.4
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCc------ccc
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRL------TSP 228 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~------~~~ 228 (513)
+++++-+............-.++.+-....+.-+.| +|++.++-+++..+..-.+++.....|+.+.+.. |+.
T Consensus 259 ~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~ 337 (510)
T KOG3574|consen 259 RDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAV 337 (510)
T ss_pred HHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhh
Confidence 455666666666666666666666666666777776 5999999988887776677766666665544221 111
Q ss_pred hhhHhhHHHHHHHHHH---HhcCC-h---hHHHHHHHHHHHHH----HhhhhhhHHHhhcccC-cchhHHHHHHHHHHHh
Q psy13668 229 FDFSASVGPGLGILAA---SYSGC-N---RLAVTVSFTLGMGT----MGAFLPSLKVNALDLS-PNYAGTLMALVGGIGA 296 (513)
Q Consensus 229 ~~~~~~~~~~~~~~~l---~~~~~-~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-p~~~g~~~gi~~~~~~ 296 (513)
... .++..+...+. ..... . .....++.+....+ .-..+....+.+.+++ |..-|+-+.+.|+..+
T Consensus 338 ~~R--~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsn 415 (510)
T KOG3574|consen 338 PYR--LGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSN 415 (510)
T ss_pred hHH--HHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHH
Confidence 111 12222222222 22211 1 11111222222222 2222333455666776 6679999999999999
Q ss_pred HHhhHHHHHHHHhccc
Q psy13668 297 LSGTVSPYLVGVLTPN 312 (513)
Q Consensus 297 i~~~igp~l~g~l~~~ 312 (513)
+|+-.=..++..+.|.
T Consensus 416 LGg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 416 LGGNWPGTVALWLADG 431 (510)
T ss_pred hcCCcHHHHHHHhccc
Confidence 9987776666655553
No 272
>KOG4686|consensus
Probab=73.24 E-value=0.39 Score=45.60 Aligned_cols=149 Identities=14% Similarity=0.042 Sum_probs=78.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC----cchhhhhHHhchhHHHHHHHHHhhhhhcCCC-cccchhhHhhH
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLH----FSITSVDLISGWPNRSVIVTYKMRTILSGPR-LTSPFDFSASV 235 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g----~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~ 235 (513)
+++..+.+.+++....++.+- .|.-+|..++ .+..+..++.+++..-+.+-..++|++.||. |.|....+.+.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd--~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~ 118 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYD--APGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCI 118 (459)
T ss_pred hHHHHHHHHHHhcccceeecC--CchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHH
Confidence 455555555554444443332 3444444433 4445677888888888999999999999984 55544444333
Q ss_pred HHHHHHHHHHhcC--ChhHHHH-HHHHHHHHHHhhhhhhHHHhhcccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhcc
Q psy13668 236 GPGLGILAASYSG--CNRLAVT-VSFTLGMGTMGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTP 311 (513)
Q Consensus 236 ~~~~~~~~l~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~ 311 (513)
...++-+++.... +..+.+. .-+.++.+.=........-....+-.++-+.++|+......+|+.+--.+.+.+.+
T Consensus 119 fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 119 FVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 3333333332221 1112111 12223332222222222222233335778888888888888887765555554443
No 273
>KOG1479|consensus
Probab=69.93 E-value=24 Score=35.67 Aligned_cols=75 Identities=16% Similarity=0.149 Sum_probs=38.8
Q ss_pred cccccccccccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHH
Q psy13668 375 MGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVM 454 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~ 454 (513)
.+....++.-...+.|+|+...+++=.+..+.+.....- +.....++.. . +-..=|.+..++.
T Consensus 131 ~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i-~tka~~~~~~-~---------------sA~~yF~~s~~~~ 193 (406)
T KOG1479|consen 131 NAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRI-LTKAAFSDSR-T---------------SALIYFITSTVIL 193 (406)
T ss_pred hhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHH-HHHHhcCCCC-c---------------eeehhHHHHHHHH
Confidence 345555555566778888876666545544444433322 2222222211 1 2334556666666
Q ss_pred HHHHHHHHhhcc
Q psy13668 455 LITNIIYCFMGS 466 (513)
Q Consensus 455 ~~~~~~~~~~~~ 466 (513)
+++.+++..+.|
T Consensus 194 llC~i~y~~l~~ 205 (406)
T KOG1479|consen 194 LLCFVLYLVLPK 205 (406)
T ss_pred HHHHHHHHHhhc
Confidence 777777764433
No 274
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=68.12 E-value=19 Score=38.20 Aligned_cols=68 Identities=6% Similarity=-0.036 Sum_probs=28.1
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCC
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGP 223 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr 223 (513)
.++||.|+. ...+..+...+....+....-..+.-..-+++..-|.+.....+.-++++.++|+.+-|
T Consensus 252 gDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~ 319 (521)
T PF02990_consen 252 GDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSAR 319 (521)
T ss_pred HHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHH
Confidence 456776652 22222233233333333333233332222444444444444444444444555555444
No 275
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=64.79 E-value=3.5 Score=41.47 Aligned_cols=58 Identities=17% Similarity=0.124 Sum_probs=46.8
Q ss_pred CCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHHHhhcc
Q psy13668 391 PNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAFFGTLLEWRVVFWTAFFVMLITNIIYCFMGS 466 (513)
Q Consensus 391 ~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~ 466 (513)
++++.+...++...-++|+.+++.+.+++-++. +|...|.++++.++++.+.++.-++
T Consensus 67 ~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~------------------~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 67 DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY------------------GWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-------------------HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hhhhhhhHHHHHHHHhhhhHhhcccchhhcccc------------------chhhhhhHHHHHHHHHHHHHHhCCc
Confidence 345677788888999999999999999886543 8999999999999999988766443
No 276
>PF12832 MFS_1_like: MFS_1 like family
Probab=62.87 E-value=23 Score=26.51 Aligned_cols=34 Identities=21% Similarity=0.182 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHH
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYV 56 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~ 56 (513)
+|+..+...+-..+++++.|.++|+. +.+.....
T Consensus 37 iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~ 70 (77)
T PF12832_consen 37 IGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILL 70 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHH
Confidence 77888888888999999999999999 76666543
No 277
>KOG3574|consensus
Probab=62.31 E-value=43 Score=33.74 Aligned_cols=82 Identities=13% Similarity=0.024 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcC-----CCcccchhhH-hh
Q psy13668 161 APVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSG-----PRLTSPFDFS-AS 234 (513)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d-----r~~~~~~~~~-~~ 234 (513)
+++..+.+.+..++.. ++...-+|.+++. .|.|-++-+.......-..+ .+++.-+.| |+||||-.+. ..
T Consensus 31 ~~illLl~LYllQGiP-~GL~~~iP~lL~a-k~vSyt~~a~fS~ay~P~sL--KllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIP-LGLIGAIPLLLQA-KGVSYTSQAIFSFAYWPFSL--KLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhHHHHHHHHHHcCCc-hhHhhhhHHHhcC-CCcchhhhhhhhhhhhHHHH--HHHHHhhhHHHHHHhhccccceeeehH
Confidence 3455555555554444 5555588888884 47777766554433322221 245666667 8998875433 33
Q ss_pred HHHHHHHHHHHh
Q psy13668 235 VGPGLGILAASY 246 (513)
Q Consensus 235 ~~~~~~~~~l~~ 246 (513)
.+....++.+.+
T Consensus 107 ~llG~~mllLs~ 118 (510)
T KOG3574|consen 107 YLLGLFMLLLSY 118 (510)
T ss_pred HHHHHHHHHHhh
Confidence 444444444544
No 278
>KOG4332|consensus
Probab=61.28 E-value=1.4e+02 Score=28.71 Aligned_cols=40 Identities=23% Similarity=0.301 Sum_probs=26.1
Q ss_pred hhHHHHHHHhhhcccccccccccccccCCCCC-ccchhhhh
Q psy13668 361 RLAVTVSFTLGMGTMGAFLPSLKVNALDLSPN-YAGTLMAL 400 (513)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~ 400 (513)
+......+++.-...|..+|++..+-..+.|+ .+++++-.
T Consensus 344 ~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNf 384 (454)
T KOG4332|consen 344 PSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNF 384 (454)
T ss_pred chHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhh
Confidence 44556667777777888888887766665554 46665533
No 279
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=61.05 E-value=2.2e+02 Score=29.93 Aligned_cols=155 Identities=17% Similarity=0.038 Sum_probs=79.6
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhc-CCCcc-------
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILS-GPRLT------- 226 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~-dr~~~------- 226 (513)
.+++|-|++..+.+..+.+-.++..--.-...-+.| .|++.++.+++..+..-..++..+..|+.+ ++-..
T Consensus 272 ~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l 350 (544)
T PF13000_consen 272 WKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLIDFPFQIILPYYIGKWSAGSPPLDVDNKAL 350 (544)
T ss_pred HHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcCCCccccccccc
Confidence 345666777766666666666655444444444555 599999988877666655555554444433 32210
Q ss_pred -------c------------chhhHhhHHHHHHH----HHHHhcC-Ch--hHHHHHHHHHHHH----HHhhhhhhHHHhh
Q psy13668 227 -------S------------PFDFSASVGPGLGI----LAASYSG-CN--RLAVTVSFTLGMG----TMGAFLPSLKVNA 276 (513)
Q Consensus 227 -------~------------~~~~~~~~~~~~~~----~~l~~~~-~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~ 276 (513)
| +..+.++..-.+.. ......+ +. ......+++.... ..-..+....+..
T Consensus 351 ~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFh 430 (544)
T PF13000_consen 351 PNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFH 430 (544)
T ss_pred cccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11112222222111 1111222 11 1111111111122 2222333445666
Q ss_pred cccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 277 LDLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 277 ~~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
..++ |..-|+-+.+.|+..|+|+-.-..++=+++
T Consensus 431 arISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lV 465 (544)
T PF13000_consen 431 ARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLV 465 (544)
T ss_pred hhccCcccchHHHHHHHHHHhcCCCchHHHHHHHh
Confidence 6666 788999999999999999766544443333
No 280
>KOG4332|consensus
Probab=58.63 E-value=1.8e+02 Score=28.03 Aligned_cols=131 Identities=15% Similarity=0.051 Sum_probs=72.2
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCccc--chhh
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVT-DLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLTS--PFDF 231 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~-~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~--~~~~ 231 (513)
+.+..++++.++-.+..+.-..+|.+.+ |.|..--+..+ .--|.+.+...++.+.|+-+..++..|-..| ....
T Consensus 242 ~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymq 318 (454)
T KOG4332|consen 242 RAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQ 318 (454)
T ss_pred HHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHH
Confidence 4556677776666555555566666544 66554221212 1235677777788888888887777665443 2333
Q ss_pred HhhHHHHHH--HHHHHhc--CC--hhHHHHHHHHHHHHHHhhhhhhHHHhhcccCcch-hHHHH
Q psy13668 232 SASVGPGLG--ILAASYS--GC--NRLAVTVSFTLGMGTMGAFLPSLKVNALDLSPNY-AGTLM 288 (513)
Q Consensus 232 ~~~~~~~~~--~~~l~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~ 288 (513)
+.+.+..+. +.++... ++ +....++.++..-.+.+..+|.+...-.++-|++ |.+.+
T Consensus 319 ivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstim 382 (454)
T KOG4332|consen 319 IVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIM 382 (454)
T ss_pred HHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhh
Confidence 333322222 2222221 11 1233344455555567788888877777777755 66555
No 281
>PRK03612 spermidine synthase; Provisional
Probab=56.21 E-value=22 Score=37.63 Aligned_cols=48 Identities=19% Similarity=0.086 Sum_probs=30.2
Q ss_pred cccccccccccccCCCCCccchhhhhhhhhhhcccccccceeeeecCC
Q psy13668 375 MGAFLPSLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPN 422 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~ 422 (513)
.|...|.......+...+..|...|-......+|+++|+.+.++++-.
T Consensus 124 ~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp 171 (521)
T PRK03612 124 IGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLP 171 (521)
T ss_pred HHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHH
Confidence 344444433333333333456677777888888888888888887653
No 282
>KOG1237|consensus
Probab=55.07 E-value=57 Score=35.00 Aligned_cols=75 Identities=15% Similarity=0.030 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCC-cccchhhHhhHHHHHH
Q psy13668 166 LIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPR-LTSPFDFSASVGPGLG 240 (513)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 240 (513)
....-.+-..+++++..-+-.|+.+.+|.+...+.-.............+.+++++|.+ ||-+.+.++.++..++
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G 117 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLG 117 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 33444455667777777888999999998887777676677777778888999999985 5555555544444333
No 283
>PF03605 DcuA_DcuB: Anaerobic c4-dicarboxylate membrane transporter; InterPro: IPR004668 These proteins are members of the C4-Dicarboxylate Uptake (Dcu) family. Most proteins in this family are predicted to have 12 GES predicted transmembrane regions; however the one member whose membrane topology has been experimentally determined has 10 transmembrane regions, with both the N- and C-termini localized to the periplasm []. The DcuA and DcuB proteins are involved in the transport of aspartate, malate, fumarate and succinate in many species [, , ], and are thought to function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively []. The Escherichia coli DcuA and DcuB proteins have very different expression patterns []. DcuA is constitutively expressed; DcuB is strongly induced anaerobically by FNR and C4-dicarboxylates, while it is repressed by nitrate and subject to CRP-mediated catabolite repression.; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane
Probab=50.08 E-value=1.2e+02 Score=30.12 Aligned_cols=23 Identities=13% Similarity=0.177 Sum_probs=10.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhh
Q psy13668 442 EWRVVFWTAFFVMLITNIIYCFM 464 (513)
Q Consensus 442 ~~~~~f~~~a~~~~~~~~~~~~~ 464 (513)
++-....++---.+++.++..++
T Consensus 161 ~~~~iL~V~iPat~ig~~~~a~~ 183 (364)
T PF03605_consen 161 SLLQILAVTIPATLIGVLVAAFV 183 (364)
T ss_pred CHHHHHHhhHHHHHHHHHHHHHH
Confidence 34444444444455555554443
No 284
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=49.95 E-value=22 Score=36.13 Aligned_cols=24 Identities=17% Similarity=0.174 Sum_probs=13.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhc
Q psy13668 442 EWRVVFWTAFFVMLITNIIYCFMG 465 (513)
Q Consensus 442 ~~~~~f~~~a~~~~~~~~~~~~~~ 465 (513)
+-|..+++...+.++=.+.+.+..
T Consensus 172 s~~~tll~~~~lp~~~~~~~f~~L 195 (402)
T PF02487_consen 172 SPRTTLLIMLVLPAIFLLSYFFLL 195 (402)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455677776666544444444433
No 285
>PRK12489 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=49.70 E-value=1.7e+02 Score=30.21 Aligned_cols=23 Identities=9% Similarity=-0.013 Sum_probs=10.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhh
Q psy13668 442 EWRVVFWTAFFVMLITNIIYCFM 464 (513)
Q Consensus 442 ~~~~~f~~~a~~~~~~~~~~~~~ 464 (513)
++.....+.-...+++.+...++
T Consensus 169 ~~f~il~VgIP~~~ig~l~~~l~ 191 (443)
T PRK12489 169 TLLDILAVTIPATLIGVLAAALW 191 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444445555444444
No 286
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=48.59 E-value=2.4e+02 Score=26.66 Aligned_cols=21 Identities=14% Similarity=-0.113 Sum_probs=14.3
Q ss_pred HHHHHHHHHHhhHHHHHHHhc
Q psy13668 172 GHDFGLFTIVTDLPKYMKDVL 192 (513)
Q Consensus 172 ~~~~~~~~~~~~lp~~l~~~~ 192 (513)
.....+|+....=..|++|+.
T Consensus 189 v~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 189 VFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHHHHhcccchHHHHHhCc
Confidence 335667777777777888764
No 287
>KOG4830|consensus
Probab=48.07 E-value=53 Score=31.16 Aligned_cols=101 Identities=6% Similarity=-0.084 Sum_probs=63.5
Q ss_pred CCchhhhccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCcchhhhhHHhchhHHHHHHHHHhhhhhcCCCcc-cch
Q psy13668 151 PTPWGKIATSAPVIGLIIAQIGHDFGLFTIVTDLPKYMKDVLHFSITSVDLISGWPNRSVIVTYKMRTILSGPRLT-SPF 229 (513)
Q Consensus 151 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~ 229 (513)
+.+|..-+++..++...+.+.+.-.....-+.|+|.|..+.++++.....++-++..+.....+.+..-.--.-.| |..
T Consensus 191 Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKay 270 (412)
T KOG4830|consen 191 RMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAY 270 (412)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeee
Confidence 4566677777788877777777666666667788888888888877777777777777666655554332222222 333
Q ss_pred hhHhhHHHHHHHHHHHhcCChh
Q psy13668 230 DFSASVGPGLGILAASYSGCNR 251 (513)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~ 251 (513)
...+.+....|...+...+...
T Consensus 271 YsaGgiiwifcga~ilLlpr~i 292 (412)
T KOG4830|consen 271 YSAGGIIWIFCGAVILLLPRGI 292 (412)
T ss_pred eecccHHHHHhhhheeecccch
Confidence 4455555555555555554443
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=47.06 E-value=6.4 Score=38.55 Aligned_cols=24 Identities=21% Similarity=0.187 Sum_probs=0.0
Q ss_pred ccccccccccccccCCCCCccchh
Q psy13668 374 TMGAFLPSLKVNALDLSPNYAGTL 397 (513)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~g~~ 397 (513)
.++...++........||++....
T Consensus 10 ~~~~~q~s~~glas~~p~~y~~a~ 33 (309)
T PF01733_consen 10 ANAVLQSSLFGLASLFPPKYTQAV 33 (309)
T ss_dssp ------------------------
T ss_pred hhHHHhccHHHHHhcCCHHHHHHH
Confidence 334444455555566777774443
No 289
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=44.76 E-value=21 Score=29.46 Aligned_cols=22 Identities=18% Similarity=0.120 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q psy13668 445 VVFWTAFFVMLITNIIYCFMGS 466 (513)
Q Consensus 445 ~~f~~~a~~~~~~~~~~~~~~~ 466 (513)
.+|.+.+++.++.++++++.+|
T Consensus 69 Ii~gv~aGvIg~Illi~y~irR 90 (122)
T PF01102_consen 69 IIFGVMAGVIGIILLISYCIRR 90 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555444444444333
No 290
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=44.37 E-value=38 Score=33.94 Aligned_cols=53 Identities=17% Similarity=0.132 Sum_probs=40.0
Q ss_pred hhhhhhhh-----hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHH
Q psy13668 9 VMLHRLVN-----EQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFYVFGAVGL 62 (513)
Q Consensus 9 ~~~~~~~~-----~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~~~g~~~~ 62 (513)
.+..|-++ +|.+....++.+..+|..++..+.+++.|+. ||...|.+.++..+
T Consensus 56 ~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 56 PFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGML 113 (372)
T ss_dssp HHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHH
T ss_pred HHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHHH
Confidence 34555552 3455577899999999999999999999999 99999987654443
No 291
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=43.38 E-value=32 Score=35.54 Aligned_cols=23 Identities=22% Similarity=0.134 Sum_probs=13.0
Q ss_pred cccccccccccccCCCCCccchh
Q psy13668 375 MGAFLPSLKVNALDLSPNYAGTL 397 (513)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~g~~ 397 (513)
.+...++........+|++.+..
T Consensus 120 ~~~~q~s~~gla~~fp~~~~~a~ 142 (437)
T TIGR00939 120 MALLQGSLFGLAGVFPSTYSSAV 142 (437)
T ss_pred hhhhcccchhhcccCCHHHHHHH
Confidence 34555555566666777664333
No 292
>KOG0637|consensus
Probab=43.03 E-value=1.3e+02 Score=31.09 Aligned_cols=76 Identities=13% Similarity=-0.085 Sum_probs=44.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hcCcch----------------hhhhHHhchhHHHHHHHHHhhhhhcC
Q psy13668 160 SAPVIGLIIAQIGHDFGLFTIVTDLPKYMKD-VLHFSI----------------TSVDLISGWPNRSVIVTYKMRTILSG 222 (513)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~lp~~l~~-~~g~s~----------------~~~~~~~~~~~~~~~ig~~~~g~l~d 222 (513)
.++.+.+++...+.-.+.+.+..+-.-++-+ .++=++ ....+-+..+.+...+-+....++.|
T Consensus 278 pr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~ 357 (498)
T KOG0637|consen 278 PRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSR 357 (498)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3667777777776666666655554444322 222111 11223445566677788888999999
Q ss_pred CCcccchhhHhhH
Q psy13668 223 PRLTSPFDFSASV 235 (513)
Q Consensus 223 r~~~~~~~~~~~~ 235 (513)
|+|-|++...+..
T Consensus 358 ~~g~r~~y~~~~~ 370 (498)
T KOG0637|consen 358 KFGTRKRYWGGVN 370 (498)
T ss_pred hcCcceEEeehhH
Confidence 9996555544433
No 293
>KOG3810|consensus
Probab=41.99 E-value=43 Score=33.26 Aligned_cols=162 Identities=14% Similarity=0.110 Sum_probs=85.1
Q ss_pred ccCcchhHHHHHHHHHHHhHHhhHHHHHHHHhccchhhhHHHhhhhhhhhhccCCCCCCCccchhhcccchhhhhhhhcc
Q psy13668 278 DLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNWLAKQICNSVTYKMRTILSGPTLTSPFDFSASVGPGLGILAASYS 357 (513)
Q Consensus 278 ~~~p~~~g~~~gi~~~~~~i~~~igp~l~g~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (513)
++.|+....-.|..-....+.++++....|.+--++. ++ ++ .....+...-+.+++.+..+
T Consensus 263 ~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~--r~--------g~---------~ll~~~s~~~agllf~m~~t 323 (433)
T KOG3810|consen 263 EVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWN--RW--------GD---------LLLAVGSAVQAGLLFIMAQT 323 (433)
T ss_pred hhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccc--hh--------hH---------HHHHHHHHHhhhhhhhhhcc
Confidence 3448888888888888888888888888877765442 22 11 22233333444455556554
Q ss_pred CCchhHHHHHHHhhhcccccccc-cccccccCCCCCccchhhhhhhhhhhcccccccceeeeecCCCcchhhhhhhhhhc
Q psy13668 358 GCNRLAVTVSFTLGMGTMGAFLP-SLKVNALDLSPNYAGTLMALVGGIGALSGTVSPYLVGVLTPNGTLLEWRVVFWTAF 436 (513)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~p~~~g~l~~~~~~~~~~~~~~~~~ 436 (513)
. +.+.+-+...+....-.+..+ .....+.....+.-|-+.|++.+..-+-..+ +.-..+|....+ -|.
T Consensus 324 ~-~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsi---lT~iVvd~~g~~-------L~i 392 (433)
T KOG3810|consen 324 Q-HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSI---LTLIVVDDRGLG-------LDI 392 (433)
T ss_pred c-ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHh---heEEEEcccccC-------CCc
Confidence 3 433222222222111111111 1122334566777888888887776554433 333344432111 011
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHhhccccc
Q psy13668 437 FGTLLEWRVVFWTAFFVMLITNIIYCFMGSGEI 469 (513)
Q Consensus 437 ~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~ 469 (513)
.....-|..=|++.+++.+++..+....+++.+
T Consensus 393 r~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~~~ 425 (433)
T KOG3810|consen 393 RTQFVVYSSYFIVLGVIFLIGFGIEYLMCRRNK 425 (433)
T ss_pred ceeEEEEeehHHHHHHHHHHHHHHHHHHhhcCC
Confidence 111224555688888888888776655554443
No 294
>PTZ00370 STEVOR; Provisional
Probab=39.67 E-value=22 Score=33.74 Aligned_cols=35 Identities=9% Similarity=0.323 Sum_probs=24.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccccccccCCcc
Q psy13668 442 EWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEPL 476 (513)
Q Consensus 442 ~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (513)
.|..+-++.-++.++-+++++++.||++..|.++.
T Consensus 256 Pygiaalvllil~vvliilYiwlyrrRK~swkhe~ 290 (296)
T PTZ00370 256 PYGIAALVLLILAVVLIILYIWLYRRRKNSWKHEC 290 (296)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 45566666666666677788887777777786543
No 295
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=37.27 E-value=5.1e+02 Score=27.17 Aligned_cols=27 Identities=7% Similarity=0.037 Sum_probs=15.9
Q ss_pred chhhhccchhHHHHHHHHHHHHHHHHH
Q psy13668 153 PWGKIATSAPVIGLIIAQIGHDFGLFT 179 (513)
Q Consensus 153 ~~~~~l~~~~~~~~~l~~~~~~~~~~~ 179 (513)
+++.++++|-.+.+.+...+.+.+...
T Consensus 274 s~k~i~~SkyL~~ial~vl~Y~v~inL 300 (509)
T COG3202 274 SFKMILRSKYLGAIALLVLAYGVSINL 300 (509)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 445667777766666666555544433
No 296
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=35.79 E-value=34 Score=32.43 Aligned_cols=34 Identities=9% Similarity=0.346 Sum_probs=23.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccccccccCCc
Q psy13668 442 EWRVVFWTAFFVMLITNIIYCFMGSGEIQEWNEP 475 (513)
Q Consensus 442 ~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 475 (513)
.|..+-++.-++.++-+++++++.||++..|.++
T Consensus 260 Pcgiaalvllil~vvliiLYiWlyrrRK~swkhe 293 (295)
T TIGR01478 260 PYGIAALVLIILTVVLIILYIWLYRRRKKSWKHE 293 (295)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 4556666666666667778888777777778653
No 297
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=32.78 E-value=2.5e+02 Score=22.27 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccC---chHHHHHHHHHHHHHH
Q psy13668 25 LMAGAQIGNVVSMAVSGLLIRYLGG---WTSVFYVFGAVGLAWF 65 (513)
Q Consensus 25 ~~~~~~lG~~i~~~i~g~L~~~~~g---wr~if~~~g~~~~~~~ 65 (513)
+.....+..++|..+|-||=.++++ |..+|.+.|++...+.
T Consensus 48 IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G~~n 91 (100)
T TIGR02230 48 IGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIGCLN 91 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHH
Confidence 3333444455555555556445521 4455555554444433
No 298
>PHA03049 IMV membrane protein; Provisional
Probab=31.91 E-value=99 Score=22.21 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccc
Q psy13668 446 VFWTAFFVMLITNIIYCFMGSGEIQ 470 (513)
Q Consensus 446 ~f~~~a~~~~~~~~~~~~~~~~~~~ 470 (513)
..++.-++.+++++++-.+.|.+..
T Consensus 5 ~~l~iICVaIi~lIvYgiYnkk~~~ 29 (68)
T PHA03049 5 IILVIICVVIIGLIVYGIYNKKTTT 29 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccc
Confidence 4556666677788887777555443
No 299
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=31.08 E-value=19 Score=35.17 Aligned_cols=20 Identities=5% Similarity=-0.205 Sum_probs=0.0
Q ss_pred HhchhHHHHHHHHHhhhhhc
Q psy13668 202 ISGWPNRSVIVTYKMRTILS 221 (513)
Q Consensus 202 ~~~~~~~~~~ig~~~~g~l~ 221 (513)
....+.++-.+|+.+.++..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~ 206 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPR 206 (309)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHhcchhcceeE
Confidence 45567888899999888753
No 300
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=30.62 E-value=45 Score=31.50 Aligned_cols=18 Identities=22% Similarity=0.663 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHhhc
Q psy13668 448 WTAFFVMLITNIIYCFMG 465 (513)
Q Consensus 448 ~~~a~~~~~~~~~~~~~~ 465 (513)
++..++++++..++.+.+
T Consensus 119 ~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 119 YIGVALVLVSGIIFSFIK 136 (254)
T ss_pred HHHHHHHHHHHHheeeec
Confidence 344445566665554543
No 301
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=27.52 E-value=42 Score=33.87 Aligned_cols=8 Identities=13% Similarity=0.048 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q psy13668 453 VMLITNII 460 (513)
Q Consensus 453 ~~~~~~~~ 460 (513)
+.......
T Consensus 135 i~~~~~~~ 142 (385)
T PF03547_consen 135 IILWSLGY 142 (385)
T ss_pred HHHHHHHH
Confidence 33333333
No 302
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=27.16 E-value=1.8e+02 Score=26.77 Aligned_cols=52 Identities=17% Similarity=0.369 Sum_probs=36.3
Q ss_pred chhhhhhhhh---hhhhhHHHHHH-HHHHHHHHHHHHHHHHHhh--ccCchHHHHHHHH
Q psy13668 7 NNVMLHRLVN---EQQSNTVILMA-GAQIGNVVSMAVSGLLIRY--LGGWTSVFYVFGA 59 (513)
Q Consensus 7 ~~~~~~~~~~---~r~~~~~i~~~-~~~lG~~i~~~i~g~L~~~--~~gwr~if~~~g~ 59 (513)
...++.++.+ +|+...+.... ...+|..+++.+++.+.+. . +||..|.....
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 172 (338)
T COG0477 115 ASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLW-GWRAAFLLAAL 172 (338)
T ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-chHHHHHHHHH
Confidence 4556677776 36666777666 5778888888888887765 4 78886655443
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.25 E-value=95 Score=24.84 Aligned_cols=38 Identities=21% Similarity=0.002 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhhcCC-CcccchhhHhhHHHHHHHHHH
Q psy13668 207 NRSVIVTYKMRTILSGP-RLTSPFDFSASVGPGLGILAA 244 (513)
Q Consensus 207 ~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~l 244 (513)
.+.+++.....||+.|| .+.+++-++.+++..++...+
T Consensus 52 fIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
No 304
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=25.77 E-value=59 Score=22.76 Aligned_cols=26 Identities=27% Similarity=0.411 Sum_probs=21.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccc
Q psy13668 442 EWRVVFWTAFFVMLITNIIYCFMGSG 467 (513)
Q Consensus 442 ~~~~~f~~~a~~~~~~~~~~~~~~~~ 467 (513)
+||.+-++.+++.++++-++-.+.+.
T Consensus 4 g~r~~~~~ggfVg~iG~a~Ypi~~~P 29 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALYPIYFRP 29 (58)
T ss_pred cccchhhHHHHHHHHHHHHhhhhccc
Confidence 79999899999999999888765554
No 305
>COG2119 Predicted membrane protein [Function unknown]
Probab=25.27 E-value=5e+02 Score=23.24 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=23.3
Q ss_pred hHHHHHHHHHhhhhhcCCCcccchhhHhhHH
Q psy13668 206 PNRSVIVTYKMRTILSGPRLTSPFDFSASVG 236 (513)
Q Consensus 206 ~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 236 (513)
..+++.++.+.+.++++|+..|.+...+.++
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aall 173 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALL 173 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 4466777888899999999988877664443
No 306
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=24.61 E-value=3.2e+02 Score=20.89 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHHHH
Q psy13668 22 TVILMAGAQIGNVVSMAVSGLLIRYLGGWTSVFY 55 (513)
Q Consensus 22 ~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~if~ 55 (513)
.+...+.+.+|..+|.+....+.++. ..+..+.
T Consensus 29 ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~ 61 (85)
T PF06779_consen 29 AGWLASANYLGYLVGALLASRLPRHS-RPRRLLR 61 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHH
Confidence 46778889999999999999888765 5455444
No 307
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=24.51 E-value=1.1e+02 Score=24.42 Aligned_cols=50 Identities=10% Similarity=0.029 Sum_probs=39.4
Q ss_pred hhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHh
Q psy13668 197 TSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASY 246 (513)
Q Consensus 197 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~ 246 (513)
..+|-....++...++.+++.++..|+....+.-..+..++.++..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 56788888899999999999999999988887777766666665544433
No 308
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=24.33 E-value=1e+02 Score=22.94 Aligned_cols=20 Identities=15% Similarity=0.449 Sum_probs=10.6
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q psy13668 442 EWRVVFWTAFFVMLITNIIY 461 (513)
Q Consensus 442 ~~~~~f~~~a~~~~~~~~~~ 461 (513)
|...+|.+..++.++-.++.
T Consensus 11 Gm~iVF~~L~lL~~~i~l~~ 30 (79)
T PF04277_consen 11 GMGIVFLVLILLILVISLMS 30 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55566666555554444443
No 309
>KOG3098|consensus
Probab=23.52 E-value=6.6e+02 Score=26.17 Aligned_cols=110 Identities=9% Similarity=-0.087 Sum_probs=70.3
Q ss_pred hhHH-hchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhhhhhhHHHhhc
Q psy13668 199 VDLI-SGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTMGAFLPSLKVNAL 277 (513)
Q Consensus 199 ~~~~-~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (513)
+|.. ..+......+.++..+-+.|+.+.|..+.++..+.......+.+.+.- ....--..+|.+. +..+........
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y-~~yfssallG~Ga-allw~GqG~ylt 128 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSY-YLYFSSALLGFGA-ALLWTGQGGYLT 128 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchH-HHHHHHHHhhhhH-Hheecccceehh
Confidence 4444 667778888899999999999999999888887777766666655522 1111112222222 233333444444
Q ss_pred ccC-cchhHHHHHHHHHHHhHHhhHHHHHHHHhc
Q psy13668 278 DLS-PNYAGTLMALVGGIGALSGTVSPYLVGVLT 310 (513)
Q Consensus 278 ~~~-p~~~g~~~gi~~~~~~i~~~igp~l~g~l~ 310 (513)
+.+ ++.+.+-.++...+...+..+|....-.+.
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 444 456888888888888887777765554443
No 310
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]
Probab=23.10 E-value=8e+02 Score=24.87 Aligned_cols=26 Identities=0% Similarity=-0.395 Sum_probs=14.8
Q ss_pred hchhHHHHHHHHHhhhhhcCCCcccc
Q psy13668 203 SGWPNRSVIVTYKMRTILSGPRLTSP 228 (513)
Q Consensus 203 ~~~~~~~~~ig~~~~g~l~dr~~~~~ 228 (513)
..+.....++..++.--+.|+.++++
T Consensus 247 ~lP~fv~~lfvgiIvrni~~~~~~~~ 272 (404)
T COG0786 247 ALPLFVMCLFVGVILRNILDLLKKYR 272 (404)
T ss_pred cccHHHHHHHHHHHHHhHHHHhcccc
Confidence 34555556666666666666655444
No 311
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=22.37 E-value=3.3e+02 Score=26.21 Aligned_cols=32 Identities=0% Similarity=-0.252 Sum_probs=20.4
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhhHHH
Q psy13668 155 GKIATSAPVIGLIIAQIGHDFGLFTIVTDLPK 186 (513)
Q Consensus 155 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lp~ 186 (513)
++..++|+.+.............+....|.|+
T Consensus 63 ~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn 94 (293)
T COG2962 63 KQLLKQPKTLLMLALTALLIGLNWWLFIWAVN 94 (293)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHhheecC
Confidence 45677787777666666655666666656543
No 312
>PRK14860 tatA twin arginine translocase protein A; Provisional
Probab=22.30 E-value=87 Score=22.55 Aligned_cols=6 Identities=17% Similarity=0.512 Sum_probs=2.6
Q ss_pred Hhhccc
Q psy13668 462 CFMGSG 467 (513)
Q Consensus 462 ~~~~~~ 467 (513)
++++..
T Consensus 18 llfGp~ 23 (64)
T PRK14860 18 VVFGPA 23 (64)
T ss_pred hhcCch
Confidence 345543
No 313
>KOG3880|consensus
Probab=21.61 E-value=8e+02 Score=24.33 Aligned_cols=53 Identities=11% Similarity=-0.062 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhh-HHHhhcccCcchhHHHHHHHHHHHhHHhhHHH
Q psy13668 251 RLAVTVSFTLGMGTMGAFLPS-LKVNALDLSPNYAGTLMALVGGIGALSGTVSP 303 (513)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~g~~~gi~~~~~~i~~~igp 303 (513)
.+.+..++..-...+|..+.+ +.....+..|++|-.+++.....-.+|-.++.
T Consensus 342 i~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~ 395 (409)
T KOG3880|consen 342 IWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAG 395 (409)
T ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHH
Confidence 333433333333334455554 45666778899999999887766665554443
No 314
>PRK02237 hypothetical protein; Provisional
Probab=21.48 E-value=1.8e+02 Score=23.30 Aligned_cols=49 Identities=4% Similarity=-0.063 Sum_probs=38.8
Q ss_pred hhhhHHhchhHHHHHHHHHhhhhhcCCCcccchhhHhhHHHHHHHHHHH
Q psy13668 197 TSVDLISGWPNRSVIVTYKMRTILSGPRLTSPFDFSASVGPGLGILAAS 245 (513)
Q Consensus 197 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~l~ 245 (513)
.++|-....++...++.+++.++..|+....+.-.++..++.++..+..
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence 3478888899999999999999999999887777776666666554443
No 315
>KOG1277|consensus
Probab=21.45 E-value=36 Score=34.55 Aligned_cols=49 Identities=16% Similarity=0.156 Sum_probs=0.0
Q ss_pred eechhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCchHH
Q psy13668 5 VINNVMLHRLVNEQQSNTVILMAGAQIGNVVSMAVSGLLIRYLGGWTSV 53 (513)
Q Consensus 5 ~~~~~~~~~~~~~r~~~~~i~~~~~~lG~~i~~~i~g~L~~~~~gwr~i 53 (513)
+++.+++.+.++|||...+......++-..+....+|-+-.|.||.||+
T Consensus 312 ii~~Alvg~fy~~rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~Wi 360 (593)
T KOG1277|consen 312 IIMLALVGVFYTERGALLSAAIVVYALTSPINGYVSGSFYARLGGRRWI 360 (593)
T ss_pred HHHHHHHhhhhccchHHHHHHHHHHHhcccccccccceeeehhccHHHH
No 316
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=20.32 E-value=2.9e+02 Score=19.56 Aligned_cols=9 Identities=33% Similarity=0.512 Sum_probs=4.9
Q ss_pred HHHhhccCch
Q psy13668 42 LLIRYLGGWT 51 (513)
Q Consensus 42 ~L~~~~~gwr 51 (513)
-+++++ ||.
T Consensus 19 GlA~~~-gid 27 (61)
T PF04024_consen 19 GLAEYF-GID 27 (61)
T ss_pred HHHHHH-CcC
Confidence 356666 543
Done!