RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13668
         (513 letters)



>d2qapa1 c.1.10.1 (A:1-357) Fructose-1,6-bisphosphate aldolase
           {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
          Length = 357

 Score = 26.9 bits (59), Expect = 6.1
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 20/69 (28%)

Query: 212 VTYKMRTILSGPRLTSPFD------FSASVGPGLGILAASYSGCNRLAVTVSFTLGMGTM 265
           VT     + +  RL +P++            PG G+LAA  S               G+ 
Sbjct: 4   VTVLQSQLPAYNRLKTPYESELIATVKKLTTPGKGLLAADESI--------------GSC 49

Query: 266 GAFLPSLKV 274
                 + +
Sbjct: 50  TKRFQPIGL 58


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.137    0.423 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,885,342
Number of extensions: 88033
Number of successful extensions: 220
Number of sequences better than 10.0: 1
Number of HSP's gapped: 219
Number of HSP's successfully gapped: 25
Length of query: 513
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 424
Effective length of database: 1,185,626
Effective search space: 502705424
Effective search space used: 502705424
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.4 bits)