BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1367
(381 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156553316|ref|XP_001600288.1| PREDICTED: alpha-methylacyl-CoA racemase-like isoform 1 [Nasonia
vitripennis]
gi|345483632|ref|XP_003424858.1| PREDICTED: alpha-methylacyl-CoA racemase-like isoform 2 [Nasonia
vitripennis]
Length = 382
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/379 (59%), Positives = 284/379 (74%), Gaps = 3/379 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M+LKGI VLE AGLAPAPFCGM+L +FGA++IRID+ G+ +QD++G GK+S+ +NLK
Sbjct: 1 MSLKGIKVLELAGLAPAPFCGMLLADFGASIIRIDRPGSNSQIQDSLGNGKRSIALNLKS 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
KG+ V K L+N+ DV+++P+RKGVMEKL+LGP L KSN +LIYARL+G+GQDGPY+ M
Sbjct: 61 KKGVDVFKRLSNRCDVLIDPYRKGVMEKLKLGPADLMKSNKKLIYARLTGFGQDGPYAEM 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+GLSG+LSL G N PTPP N AADF GGGLMCA GI MAL ER++S +GQV
Sbjct: 121 AGHDINYVGLSGLLSLFGRHNEKPTPPSNFAADFAGGGLMCAFGIAMALLERNESKKGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
ID +M EG+AYLGSW R+++ LW +PRG+NLLD GAHFYDTYETKDG +MAVGALES
Sbjct: 181 IDASMTEGTAYLGSWFYRSRNLPGLWTEPRGKNLLDTGAHFYDTYETKDGHYMAVGALES 240
Query: 240 QFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
QFY L LG+TE+EL + E R KL++ FK KTQ EWC IFD TDACVTPVL+L
Sbjct: 241 QFYDIFLDKLGLTEDELLHFDNFEENREKLSDIFKSKTQDEWCSIFDGTDACVTPVLTLD 300
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEH-NPAPGVHTREVLRHFGY 357
SH HN + +F R +V P AP+LSRTPG S T N PG HT E+L + +
Sbjct: 301 NVASHKHNDYSKTFSIGRDNLVIPNVAPKLSRTPGVSCATRFPNTNPGEHTIEILTEYKF 360
Query: 358 SDANIEELIREDVIEETIE 376
+ I++LI +++E+T +
Sbjct: 361 TSKEIKDLIDNNIVEQTTK 379
>gi|383861208|ref|XP_003706078.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Megachile rotundata]
Length = 381
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/378 (57%), Positives = 277/378 (73%), Gaps = 3/378 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLE AGLAP PFCGMIL EFGA+VI++DK + D++G GK+S+ +NLK
Sbjct: 1 MPLKGIKVLELAGLAPGPFCGMILAEFGASVIKVDKINTF-YSIDSLGNGKRSIALNLKN 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+++ K L+NQSDV+++PFR GVMEK++LGP+ L K+N RLIYARL+G+G GPY++M
Sbjct: 60 HEGINIFKKLSNQSDVLIDPFRPGVMEKMKLGPEELMKANTRLIYARLNGFGNKGPYANM 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LSL G N+ PTPP NLAADFGGGGLMCA GI++ALFER+KS GQ+
Sbjct: 120 AGHDINYLALSGLLSLFGRYNQKPTPPANLAADFGGGGLMCAFGIMLALFERTKSNTGQI 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
+D +MV+G+AYLGSWL R+Q LW PRG+N+LD GAHFYDTYETKDG++M VGA+E
Sbjct: 180 VDTSMVDGTAYLGSWLFRSQKLPGLWGNPRGKNILDSGAHFYDTYETKDGQYMCVGAIEP 239
Query: 240 QFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
QFY L LG++E+E+PQ + + R L + FK+KTQ EWC IFD TDACVTPVL+L
Sbjct: 240 QFYQIFLDKLGLSEDEMPQFDKFDENREILEKIFKQKTQTEWCSIFDGTDACVTPVLNLE 299
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
H HN R +F+ N+ G V P P P LSRT G SK E NP G HT E+L +
Sbjct: 300 DVALHAHNKERKTFMSNKDGTVIPNPTPHLSRTSGRSKGYERNPERGEHTTEILTELNFK 359
Query: 359 DANIEELIREDVIEETIE 376
I LI V+ + I+
Sbjct: 360 PEEISTLISTGVVSQGIK 377
>gi|340711797|ref|XP_003394455.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Bombus terrestris]
Length = 382
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/383 (57%), Positives = 275/383 (71%), Gaps = 3/383 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLE AGLAP PFCGMIL +FGA+VIR+DK D +G+GK+S+ +NLK
Sbjct: 1 MPLKGINVLELAGLAPGPFCGMILAQFGASVIRVDKIYGSYNAIDCLGHGKRSIALNLKV 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ + L NQSDV+++P+R GVMEK++LGP+ L N RLIYARL+G+G +GPY++M
Sbjct: 61 YEGSNIFRKLINQSDVLIDPYRPGVMEKMKLGPEELMGINKRLIYARLTGFGHNGPYANM 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LSL G N+ PTPP NL ADF GGGLMCA GI++ALFERSKSG GQV
Sbjct: 121 AGHDINYLALSGLLSLFGRHNQKPTPPVNLVADFAGGGLMCAFGIILALFERSKSGIGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
ID +MV+GSAYLGSW R+Q+ LW PRG+N+LD G HFYDTYETKD ++M VGA+ES
Sbjct: 181 IDASMVDGSAYLGSWFFRSQNVPGLWGNPRGKNILDSGTHFYDTYETKDKQYMCVGAIES 240
Query: 240 QFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+FY L LG++ E+PQ E E R KL + FK+KTQAEWC IFD TDACVTPVL+L
Sbjct: 241 KFYEIFLEKLGISSHEMPQFENFEESRKKLEKIFKQKTQAEWCAIFDGTDACVTPVLNLK 300
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
SH HN R F G+V P PAPRLSRTPG SK E + G HT E+L +
Sbjct: 301 DVASHAHNKERNIFKTEDNGLVTPNPAPRLSRTPGMSKKHEGSAKLGEHTTEILTELDFK 360
Query: 359 DANIEELIREDVIEETIEMNSKL 381
I LI ++ + ++ +SKL
Sbjct: 361 PEEIANLIANGIVNQGMK-HSKL 382
>gi|350402425|ref|XP_003486479.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Bombus impatiens]
Length = 382
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/383 (57%), Positives = 274/383 (71%), Gaps = 3/383 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLE AGLAP PFCGMIL +FGA+VIR+DK D +G+GK+S+ +NLK
Sbjct: 1 MPLKGINVLELAGLAPGPFCGMILAQFGASVIRVDKTYGSYNAIDCLGHGKRSIALNLKV 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ + L NQSDV+++P+R GVME+++LGP+ L N RLIYARL+G+G +GPY++M
Sbjct: 61 YEGSNIFRKLINQSDVLIDPYRPGVMERMKLGPEELMGINKRLIYARLTGFGHNGPYANM 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LSL G N+ PTPP NL ADF GGGLMCA GI++ALFERSKSG GQV
Sbjct: 121 AGHDINYLALSGLLSLFGRHNQKPTPPVNLVADFAGGGLMCAFGIILALFERSKSGIGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
ID +MV+GSAYLGSW R+Q+ LW PRG+N+LD G HFYDTYETKD ++M VGA+E
Sbjct: 181 IDASMVDGSAYLGSWFFRSQNVPGLWGNPRGKNILDSGTHFYDTYETKDKQYMCVGAIEP 240
Query: 240 QFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+FY L LG++ E+PQ E E R KL + FK+KTQAEWC IFD TDACVTPVL+L
Sbjct: 241 KFYEIFLEKLGISSHEMPQFENFEESREKLEKIFKQKTQAEWCAIFDGTDACVTPVLNLK 300
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
SH HN R F G+V P PAPRLSRTPG SK E N G HT E+L +
Sbjct: 301 DVASHAHNKERNIFKTGDNGLVTPNPAPRLSRTPGISKKHERNAKLGEHTTEILTELDFK 360
Query: 359 DANIEELIREDVIEETIEMNSKL 381
I LI ++ + ++ +SKL
Sbjct: 361 PEEIVNLIANGIVNQGMK-HSKL 382
>gi|307191560|gb|EFN75058.1| Alpha-methylacyl-CoA racemase [Harpegnathos saltator]
Length = 379
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/376 (60%), Positives = 279/376 (74%), Gaps = 5/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLE AGLAP PFCGM+L +FGA+VIRIDK GAQ D++G+GK+S+ +NLK
Sbjct: 1 MVLKGIKVLELAGLAPGPFCGMVLADFGASVIRIDKIGAQAI--DSLGHGKRSIALNLKS 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ + K L+NQSDVI++ +R+GVMEKL++GP L SN +LIYARL+G+GQ GPY+ M
Sbjct: 59 KEGIEIFKKLSNQSDVIIDTYRRGVMEKLKIGPKDLMTSNKKLIYARLTGFGQVGPYADM 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYLGLSG+LSL G N PTPP NLAADFGGGGLMCA GI++AL+ER KS GQV
Sbjct: 119 AGHDINYLGLSGLLSLFGRYNEKPTPPVNLAADFGGGGLMCAFGIILALYERYKSNVGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
+D +MVEGSAYLGSWL R+Q FLW +PRG+N+LD G HFYDTYETKD R+M VGALE
Sbjct: 179 VDASMVEGSAYLGSWLFRSQKMPFLWGRPRGKNILDSGVHFYDTYETKDNRYMCVGALEP 238
Query: 240 QFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
QFY L LG+T +E+ Q E E R ++TE FK+KTQAEWC IFD TDACVTP+LSL
Sbjct: 239 QFYEIFLKKLGLTSDEVSQFENFEENRCRITEIFKQKTQAEWCAIFDGTDACVTPLLSLK 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
A SH HN ++G+F V+ P P+PRLSRTPG S T N PG ++ E+L Y
Sbjct: 299 DAASHIHNQYQGTFTTIGDDVI-PNPSPRLSRTPGISTGTRKNSQPGENSIEILTELKYQ 357
Query: 359 DANIEELIREDVIEET 374
I L+ + + +T
Sbjct: 358 TKEINYLLSNNFVYQT 373
>gi|119913313|ref|XP_593629.3| PREDICTED: alpha-methylacyl-CoA racemase [Bos taurus]
gi|297487754|ref|XP_002696431.1| PREDICTED: alpha-methylacyl-CoA racemase [Bos taurus]
gi|296475743|tpg|DAA17858.1| TPA: alpha-methylacyl-CoA racemase [Bos taurus]
Length = 382
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/376 (56%), Positives = 278/376 (73%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GITV+E AGLAP PFCGM+L +FGA V+R+D+ GA+ + GK+SL ++LK+
Sbjct: 1 MALRGITVVELAGLAPVPFCGMVLADFGAQVVRVDRPGARS-GPSRLARGKRSLVVDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L ++DV+LEPFR GVMEKLQLGP++L K NPRLIYARLSG+GQ G +S M
Sbjct: 60 PRGAAVLRRLCARADVMLEPFRPGVMEKLQLGPEILQKENPRLIYARLSGFGQSGRFSKM 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADFGGGGLMCA+GI+MALFER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLSRIGRSGENPYAPLNLLADFGGGGLMCAMGIIMALFERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S++ +TQ+T LW++PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDASMVEGTAYLSSFMWKTQETGLWEQPRGQNMLDGGAPFYTTYRTADGGFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQLSMKDWPEMKKKFADIFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ T H HN RGSFI + V+P PAP LS TP I + +P G HT E+L+ FG
Sbjct: 300 FEEVTHHGHNKDRGSFITDTEQRVSPRPAPLLSNTPALPSI-KRDPFVGEHTEEILKEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L +++IE
Sbjct: 359 FSQKEINQLKLDNIIE 374
>gi|91083301|ref|XP_974629.1| PREDICTED: similar to alpha methylacyl-coa racemase [Tribolium
castaneum]
gi|270007738|gb|EFA04186.1| hypothetical protein TcasGA2_TC014435 [Tribolium castaneum]
Length = 378
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/373 (58%), Positives = 271/373 (72%), Gaps = 3/373 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI VLE AGLAPAPFCGM+L++FGA+V+RIDK GA D +G GKKS+ +NLK
Sbjct: 1 MALRGIRVLELAGLAPAPFCGMVLSDFGASVLRIDKVGAN-IDLDCLGNGKKSIALNLKD 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G +++ LA SDV++EPFRKGVME+L LGP+ L K NPRLIYARL+G+GQ G YS+
Sbjct: 60 PNGAKIVRKLAKTSDVLIEPFRKGVMERLGLGPETLMKENPRLIYARLTGWGQTGLYSAR 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LSL G + + P P NLAADFGGGGLMCALGI++AL ER SG GQV
Sbjct: 120 AGHDINYLALSGLLSLFGRKGQKPIFPVNLAADFGGGGLMCALGILLALHERHSSGLGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYLGSWL R+Q +W RG N LD G+HFY+ YETKDG+F++VGALE Q
Sbjct: 180 IDSSMVEGTAYLGSWLFRSQKLPIWGNERGSNQLDSGSHFYEVYETKDGKFVSVGALEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQ-HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
FY +LL GLG++ +E PQ + E + KFKEKTQ EWC IFD DACV PVL+L +
Sbjct: 240 FYEKLLQGLGLSYDEAPQFDDYEKLKVLFARKFKEKTQEEWCRIFDKADACVAPVLTLEE 299
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSD 359
A HPHN RG F ++ P PAP LSRTPG + + P G HT +VL+ GYSD
Sbjct: 300 APEHPHNKERGCFARMGDDII-PKPAPVLSRTPGEASGLKAAPNCGEHTWDVLKGLGYSD 358
Query: 360 ANIEELIREDVIE 372
NI +L+ + +E
Sbjct: 359 NNINDLVAKGTVE 371
>gi|56118274|ref|NP_001007886.1| alpha-methylacyl-CoA racemase [Xenopus (Silurana) tropicalis]
gi|51259079|gb|AAH80155.1| amacr protein [Xenopus (Silurana) tropicalis]
Length = 382
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/370 (58%), Positives = 270/370 (72%), Gaps = 8/370 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ VLE AGLAPAPFCGMIL +FGA VIR+DK + + DT+ GKKS+ +NLK
Sbjct: 1 MALAGVRVLELAGLAPAPFCGMILADFGAKVIRVDKSSSN-VIMDTMARGKKSIVVNLKN 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+SV+K L +SDV++EPFR GVME L LGPD++ K NP+LIYARL+G+GQ G Y+
Sbjct: 60 REGISVLKKLCKKSDVLIEPFRHGVMESLGLGPDIMLKENPQLIYARLTGFGQSGKYAKS 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ +SG+LS LG +N +PTPP NL ADF GGGL+CALGIVM+L+ER+ SG+GQV
Sbjct: 120 AGHDINYVSMSGLLSKLGVKNDSPTPPLNLLADFAGGGLICALGIVMSLYERTMSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
IDC+MVEG+AY+GS++ ++Q LW GENLLDGGA FY TY T DG+FMAVG LE++
Sbjct: 180 IDCSMVEGAAYVGSFIWKSQKLGLWSNSPGENLLDGGAPFYTTYMTADGKFMAVGPLETK 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA+LL GL + ELP H++ + +KF+EKTQAEWC IFD TDACVTPVL
Sbjct: 240 FYAELLKGLELDASELP-HQMSFSDWPEMKRIFAQKFREKTQAEWCRIFDGTDACVTPVL 298
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
S S H HN RGSFI N G ++P PAP LSRTP T +P G HT E+L +
Sbjct: 299 SFSDVALHQHNEDRGSFICNDEGELSPRPAPLLSRTPAAPN-TSRDPLVGEHTHEILAEY 357
Query: 356 GYSDANIEEL 365
G+S I +L
Sbjct: 358 GFSQREISDL 367
>gi|403290317|ref|XP_003936267.1| PREDICTED: alpha-methylacyl-CoA racemase isoform 1 [Saimiri
boliviensis boliviensis]
Length = 382
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 276/376 (73%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L+GI+V+E AGLAP PFCGM+L +FGA V+R+D+ G++ + + GK+SL ++LK+
Sbjct: 1 MTLQGISVVELAGLAPGPFCGMVLADFGARVMRVDRPGSR-YDVSGLARGKRSLALDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G++V++ L QSDV+LEPFR GVME+LQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGVAVLRRLCAQSDVLLEPFRSGVMERLQLGPEILQRENPRLIYARLSGFGQSGSFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G + NP P NL ADF GGGLMCALGI+MALFER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSDENPYAPLNLLADFAGGGLMCALGIIMALFERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKFNLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQ----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP ++ + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKPDELPNQMSMNDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ SH HN RGSFI N V+P PAP LS TP + +P G HT E+L+ FG
Sbjct: 300 FEEVVSHDHNKERGSFITNEEQDVSPRPAPLLSDTPAVPSF-KRDPFVGEHTEEILKEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I++L + +IE
Sbjct: 359 FSLKEIDQLTSDKIIE 374
>gi|403290319|ref|XP_003936268.1| PREDICTED: alpha-methylacyl-CoA racemase isoform 2 [Saimiri
boliviensis boliviensis]
Length = 384
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 276/376 (73%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L+GI+V+E AGLAP PFCGM+L +FGA V+R+D+ G++ + + GK+SL ++LK+
Sbjct: 1 MTLQGISVVELAGLAPGPFCGMVLADFGARVMRVDRPGSR-YDVSGLARGKRSLALDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G++V++ L QSDV+LEPFR GVME+LQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGVAVLRRLCAQSDVLLEPFRSGVMERLQLGPEILQRENPRLIYARLSGFGQSGSFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G + NP P NL ADF GGGLMCALGI+MALFER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSDENPYAPLNLLADFAGGGLMCALGIIMALFERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKFNLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQ----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP ++ + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKPDELPNQMSMNDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ SH HN RGSFI N V+P PAP LS TP + +P G HT E+L+ FG
Sbjct: 300 FEEVVSHDHNKERGSFITNEEQDVSPRPAPLLSDTPAVPSF-KRDPFVGEHTEEILKEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I++L + +IE
Sbjct: 359 FSLKEIDQLTSDKIIE 374
>gi|307168557|gb|EFN61615.1| Alpha-methylacyl-CoA racemase [Camponotus floridanus]
Length = 379
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/368 (60%), Positives = 276/368 (75%), Gaps = 5/368 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MALKGI VLE AGLAP PFCGMIL +FGA+VIR+DK G Q + D +G+GK+S+ +NLK
Sbjct: 1 MALKGIKVLELAGLAPGPFCGMILADFGASVIRVDKIGTQ--ILDHLGHGKRSIALNLKS 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
KG+++ K L+NQSDVI++ +R+GVMEKL++GP+ L +N +LIYARL+GYGQDG Y++M
Sbjct: 59 EKGINIFKKLSNQSDVIIDTYRRGVMEKLKIGPNELMATNKKLIYARLTGYGQDGSYANM 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYLGLSG+LSL G N PTPP NLAADFGGGGLMCA GI++AL+ER+K+ GQV
Sbjct: 119 AGHDINYLGLSGLLSLFGRYNEKPTPPVNLAADFGGGGLMCAFGIMLALYERTKTNVGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTF-LWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
ID +MV+GSAYLGSWL R+Q LW PRG+N+LD G+HFYDTYETKD +M VGALE
Sbjct: 179 IDASMVDGSAYLGSWLFRSQKMLGLWGNPRGKNILDTGSHFYDTYETKDKLYMCVGALEP 238
Query: 240 QFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
QFY + LG + EE+PQ+E E R K+ E FK+KTQAEWC IFD TDACVTP+L+L
Sbjct: 239 QFYEIFVEKLGFSSEEMPQYENFEENRRKIAEIFKKKTQAEWCAIFDGTDACVTPMLNLK 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
A SH HN R +F V+ P PAPRLS TPG S T NP PG +T E+L +
Sbjct: 299 DAASHSHNEQRQTFTTIGDDVI-PNPAPRLSHTPGISTGTCRNPQPGENTVEILTELKFQ 357
Query: 359 DANIEELI 366
I+ L+
Sbjct: 358 SKEIDNLL 365
>gi|109939787|gb|AAI18287.1| AMACR protein [Bos taurus]
Length = 381
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/375 (56%), Positives = 276/375 (73%), Gaps = 6/375 (1%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKA 61
AL+GITV+E AGLAP PFCGM+L +FGA V+R+D+ A+ + GK+SL ++LK+
Sbjct: 1 ALRGITVVELAGLAPVPFCGMVLADFGAQVVRVDRPAARS-GPSRLARGKRSLVVDLKQP 59
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G +V++ L ++DV+LEPFR GVMEKLQLGP++L K NPRLIYARLSG+GQ G +S MA
Sbjct: 60 RGAAVLRRLCARADVMLEPFRPGVMEKLQLGPEILQKENPRLIYARLSGFGQSGRFSKMA 119
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL LSG+LS +G NP P NL ADFGGGGLMCA+GI+MALFER++SG+GQVI
Sbjct: 120 GHDINYLALSGVLSRIGRSGENPYAPLNLLADFGGGGLMCAMGIIMALFERTRSGKGQVI 179
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D +MVEG+AYL S++ +TQ+T LW++PRG+N+LDGGA FY TY T DG FMAVGA+E QF
Sbjct: 180 DASMVEGTAYLSSFMWKTQETGLWEQPRGQNMLDGGAPFYTTYRTADGGFMAVGAIEPQF 239
Query: 242 YAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
Y L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 YELLIKGLGLKSDELPNQLSMKDWPEMKKKFADIFAKKTKAEWCQIFDGTDACVTPVLTF 299
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
+ T H HN RGSFI + V+P PAP LS TP I + +P G HT E+L+ FG+
Sbjct: 300 EEVTHHGHNKDRGSFITDTEQRVSPRPAPLLSNTPALPSI-KRDPFVGEHTEEILKEFGF 358
Query: 358 SDANIEELIREDVIE 372
S I +L +++IE
Sbjct: 359 SQKEINQLKLDNIIE 373
>gi|348528053|ref|XP_003451533.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Oreochromis
niloticus]
Length = 382
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/376 (57%), Positives = 273/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+E AGLAPAPFCGMIL +FGA VIR+D+ P DT GK+S+ INLK
Sbjct: 1 MALAGVRVIELAGLAPAPFCGMILADFGAKVIRVDRTKV-PVSLDTQARGKRSVAINLKT 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+++++ L +SDV+LEP+RKGVMEKL LGP L K NPRLIYARL+GYGQ G Y++
Sbjct: 60 TEGIALLRKLCIKSDVVLEPYRKGVMEKLGLGPHELLKENPRLIYARLTGYGQSGSYATA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ +SG+LS LG P P NL ADFGGGGL CALGIV+AL ER+KSG+GQ+
Sbjct: 120 AGHDINYIAMSGLLSRLGRSGEKPYAPLNLLADFGGGGLTCALGIVLALLERTKSGKGQI 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AY+GS+L +++ LW++ RGEN+LD GA FYDTY+T DG+FMAVGA+E Q
Sbjct: 180 IDASMVEGAAYMGSFLWKSRSIGLWNRSRGENMLDSGAPFYDTYQTSDGQFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY +LL GL + ELP + R TE+F KTQAEW EIFD TDACVTPVLS
Sbjct: 240 FYKRLLKGLELDAGELPSQMSFDDWPELRRIFTERFASKTQAEWSEIFDGTDACVTPVLS 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
Q +SHPHN RGSF+ + +G +P PAP LSRTP +T +P G HT EVL+ +G
Sbjct: 300 FDQVSSHPHNRERGSFMKDSSGEESPRPAPVLSRTPAEPCLTS-DPVTGEHTAEVLQEYG 358
Query: 357 YSDANIEELIREDVIE 372
++ I++++ VIE
Sbjct: 359 FTSPQIDQMLSAGVIE 374
>gi|66472498|ref|NP_001018462.1| alpha-methylacyl-CoA racemase [Danio rerio]
gi|63101912|gb|AAH95377.1| C1q and tumor necrosis factor related protein 3 [Danio rerio]
Length = 382
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/376 (56%), Positives = 272/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+E AGLAPAPFCGMIL++FGA VIR+D+ V DT GK+S+ +NLK
Sbjct: 1 MALAGVRVIELAGLAPAPFCGMILSDFGARVIRVDRTKVAMTV-DTQARGKQSVALNLKS 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
KG++V+K L QSDV+LEP+RKGVMEK+ LGP+ L K NPRLIYARL+GYGQ G Y+
Sbjct: 60 PKGVAVLKRLCLQSDVVLEPYRKGVMEKMGLGPEDLIKENPRLIYARLTGYGQSGSYAKA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SG+LS+LG + P P NL ADF GGGLMCA GIV+AL ERS+SG+GQ+
Sbjct: 120 AGHDINYLAMSGLLSMLGRSSEKPYAPLNLVADFAGGGLMCAFGIVLALLERSRSGQGQI 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AY+GS++ +++ LW++PRGENLLD GA FYDTY T DG+++AVGA+E Q
Sbjct: 180 IDASMVEGAAYVGSFMWKSRSIGLWNRPRGENLLDSGAPFYDTYRTSDGKYVAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY QL+ GLG+ + +LP T R T+ F KTQAEW +IFD TDACVTPVLS
Sbjct: 240 FYQQLIQGLGLDDTDLPSQMSVTDWPQLRQTFTQVFATKTQAEWGQIFDGTDACVTPVLS 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ SH HN RGSF+ + G ++P PAP LSR+P +P G HTR VL+ +G
Sbjct: 300 QDEVLSHSHNQARGSFLKDSQGEISPRPAPVLSRSP-AEPCGSRDPFIGEHTRPVLKEYG 358
Query: 357 YSDANIEELIREDVIE 372
+ A IE+L+ ++E
Sbjct: 359 FDQAQIEQLLSAGIVE 374
>gi|348568974|ref|XP_003470273.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Cavia porcellus]
Length = 382
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/384 (55%), Positives = 276/384 (71%), Gaps = 9/384 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+ I VLE AGLAPAPFCGMIL +FGA V+R+D+ GA ++ + GK+SL ++LK+
Sbjct: 1 MALRDINVLELAGLAPAPFCGMILADFGAKVVRVDRPGASGYLSH-LDRGKRSLALDLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L ++DV+LEPFR GVMEKLQLGPD+L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGAGTLRRLCARADVLLEPFRSGVMEKLQLGPDLLLQENPRLIYARLSGFGQSGSFSQV 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADFGGGGLMCALGI++AL ER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLSQIGRSGENPHAPLNLLADFGGGGLMCALGILVALMERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S++ +TQ LW +PRG+NLLDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDASMVEGTAYLSSFIWKTQKMGLWSEPRGQNLLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYQVLIKGLGLKSDELPNQMSKVDWPEMKKKFADIFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L +A HN RGSFI + ++P PAP L RTP T+ +P G HT+E+L+ FG
Sbjct: 300 LEEAAHQNHNRERGSFITDEEQCMSPRPAPLLLRTPAIPS-TKRDPFIGEHTKEILKEFG 358
Query: 357 YSDANIEELIREDVIEETIEMNSK 380
++ I+EL E VI+ NSK
Sbjct: 359 FNQKEIDELHSEGVIQSA---NSK 379
>gi|296194821|ref|XP_002745102.1| PREDICTED: alpha-methylacyl-CoA racemase [Callithrix jacchus]
Length = 382
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/376 (55%), Positives = 275/376 (73%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E AGLAP PFCGM+L +FGA VIR+D+ G++ + + GK+SL ++LK+
Sbjct: 1 MALQGISVVELAGLAPGPFCGMVLADFGARVIRVDRPGSR-YDLSGLARGKRSLALDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G++V++ L +SDV+LEPFR GVME+LQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGVAVLRRLCAKSDVLLEPFRSGVMERLQLGPEILQRENPRLIYARLSGFGQSGSFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G + NP P NL ADF GGGLMCALGI+MALFER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSDENPYAPLNLLADFAGGGLMCALGIIMALFERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKLNLWKAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQ----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GL + +ELP ++ + K + F +KT+AEWC+IFD T+ACVTPVL+
Sbjct: 240 FYELLIKGLELKPDELPNQMSMNDWPEMKKKFADVFAKKTKAEWCQIFDGTNACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ SH HN RGSFI + V+P PAP LS TP + +P G HT E+L+ FG
Sbjct: 300 FEEVVSHDHNKERGSFITSEERDVSPRPAPLLSDTPAVPSF-KRDPFVGEHTEEILKEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I++L + +IE
Sbjct: 359 FSLKEIDQLTSDKIIE 374
>gi|260802189|ref|XP_002595975.1| hypothetical protein BRAFLDRAFT_267844 [Branchiostoma floridae]
gi|229281228|gb|EEN51987.1| hypothetical protein BRAFLDRAFT_267844 [Branchiostoma floridae]
Length = 380
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 274/376 (72%), Gaps = 8/376 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ V+E AGLAPAPFCG+IL++FGA V R+DK A D + GK+S+ +NLK+
Sbjct: 1 MALRGVKVVELAGLAPAPFCGLILSDFGAKVTRVDKTRAA-VSMDMLARGKRSVALNLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ V++ + +SDV++EPFR GVME+L LGPD L K NP LIYAR++G+GQ G +S M
Sbjct: 60 QEGVDVLRRMCQKSDVLIEPFRAGVMERLGLGPDTLMKDNPGLIYARMTGFGQSGSFSQM 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+GLSG+LSLLG ++ NP PP NL DF GGGL CALGIVMAL ER+KSG+GQV
Sbjct: 120 AGHDINYIGLSGMLSLLGRKHENPMPPTNLLGDFAGGGLTCALGIVMALLERTKSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG++Y+GS++ T+ F++ RGENLLD GAHFY+TY+TKDG++MAVGALE Q
Sbjct: 180 IDANMVEGASYVGSFIWHTR--FMFSHGRGENLLDTGAHFYETYKTKDGKYMAVGALEPQ 237
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLS 296
FYAQLL GLG+ E+LP + E+ F KTQAEWCE+FD TDAC TP+L+
Sbjct: 238 FYAQLLEGLGLANEDLPPQMDRDSWPSMKERFATVFSSKTQAEWCEVFDGTDACTTPILT 297
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ +A +HPHN R S++ N+ G V P PAP LSRTPG P G HT+EV+ G
Sbjct: 298 MEEAPNHPHNKSRDSYLTNQDGGVQPRPAPLLSRTPGVGGAGPQ-PKVGQHTKEVMVETG 356
Query: 357 YSDANIEELIREDVIE 372
+S+ I +L+ +E
Sbjct: 357 FSEEEIHKLVECGAVE 372
>gi|308321361|gb|ADO27832.1| alpha-methylacyl-CoA racemase [Ictalurus furcatus]
Length = 382
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/376 (56%), Positives = 271/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+E AGLAPAPFCGMIL++FGA VIR+D+ D GK+S+ +NLK
Sbjct: 1 MALAGVRVIELAGLAPAPFCGMILSDFGARVIRVDRTKVT-MAMDAQARGKQSVALNLKS 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G++V+K L QSD++LEPFRKGVMEKL LGP+ L K NPRLIYARL+GYGQ G Y+
Sbjct: 60 PQGVAVLKKLCLQSDIVLEPFRKGVMEKLGLGPEELLKENPRLIYARLTGYGQSGSYAKS 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SG+LS+LG + P P NL ADF GGGLMCALGIV+AL ER++SG+GQ+
Sbjct: 120 AGHDINYLAMSGLLSMLGRSSEKPYAPLNLVADFAGGGLMCALGIVLALLERNESGQGQI 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AY+GS++ +++ LW++PRGEN+LD GA FYDTY+T DG+ MAVGA+E Q
Sbjct: 180 IDASMVEGAAYVGSFMWKSRSLGLWNRPRGENMLDSGAPFYDTYQTSDGKHMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ LP + R T+ F +KTQAEW IFD TDACVTPVL
Sbjct: 240 FYDHLIKGLGLDAASLPAQMSISDWTELRRTFTQVFAQKTQAEWSRIFDGTDACVTPVLP 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L +A SHPHN RGSF+ + G V+P PAP LSRTP ++ +P G HTR VL +G
Sbjct: 300 LDEAGSHPHNRERGSFLKDAQGEVSPRPAPVLSRTPARPCLS-RDPVVGEHTRSVLGEYG 358
Query: 357 YSDANIEELIREDVIE 372
+ +IE+L+ V+E
Sbjct: 359 FDPDHIEQLLSAGVVE 374
>gi|311273557|ref|XP_003133921.1| PREDICTED: alpha-methylacyl-CoA racemase [Sus scrofa]
Length = 386
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/374 (56%), Positives = 273/374 (72%), Gaps = 6/374 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+G+ V+E AGLAPAPFCGM+L +FGA V+R+D+ G+ P + GK+SL +NLK+ +
Sbjct: 7 LQGVRVVELAGLAPAPFCGMVLADFGAQVVRVDRPGS-PGDPSPLARGKRSLVVNLKRPQ 65
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G +VM+ L +DV+LEPFR GVMEKLQLGP+ L + NP+LIYARLSG+GQ G + +AG
Sbjct: 66 GPAVMRRLCALADVVLEPFRPGVMEKLQLGPETLLRENPKLIYARLSGFGQSGRFFQVAG 125
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYL LSG+LS +G NP PP NL ADFGGG LMCALGI+MALFER++SG+GQ+ID
Sbjct: 126 HDINYLALSGVLSRIGRSGENPQPPMNLLADFGGGSLMCALGIMMALFERTRSGKGQIID 185
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+MVEG+AYL S+L +TQ T LWD+PRG+N+LDGGA FY TY+T DG FMAVGA+E +FY
Sbjct: 186 ASMVEGTAYLSSFLWKTQLTGLWDQPRGQNMLDGGAPFYTTYKTADGGFMAVGAIEQKFY 245
Query: 243 AQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+L
Sbjct: 246 ELLVKGLGLKSDELPHQMSIRDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLTLE 305
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
+ H HN RGSFI + V+P PAP LS TP +E NP G HT E+L+ FG+S
Sbjct: 306 EVAHHGHNKDRGSFITDGEQGVSPRPAPLLSNTPAVPS-SERNPFVGEHTEEILKEFGFS 364
Query: 359 DANIEELIREDVIE 372
I +L +++IE
Sbjct: 365 QEEIIQLKSDEIIE 378
>gi|281341857|gb|EFB17441.1| hypothetical protein PANDA_008113 [Ailuropoda melanoleuca]
Length = 376
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/378 (56%), Positives = 274/378 (72%), Gaps = 11/378 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD--TVGYGKKSLCINL 58
MAL+GI+VLE AGL P P+CGM+L +FGA V+R+D+ G ++D + K+SL ++L
Sbjct: 1 MALRGISVLELAGLGPGPYCGMVLADFGAHVVRVDRLGD---LRDLGVLARAKRSLAVDL 57
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K+ +G +V++ L ++DV+LEPFR GVMEKLQLGP++L K NP+LIYARLSG+GQ G +S
Sbjct: 58 KRPQGAAVLRRLCARTDVVLEPFRPGVMEKLQLGPEILQKENPKLIYARLSGFGQSGRFS 117
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+AGHDINYL LSG+LS +G NP PP NL ADFGGGGLMC LGI+MALFER++SG+G
Sbjct: 118 RVAGHDINYLALSGVLSKIGRNGENPFPPLNLLADFGGGGLMCTLGILMALFERTRSGKG 177
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID NMVEG+AYL S+L +TQ LWD+P+G+NLLDGGA FY TY+T DG FMAVGALE
Sbjct: 178 QVIDANMVEGTAYLSSFLWKTQQIGLWDQPQGQNLLDGGAPFYTTYKTADGGFMAVGALE 237
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFY L+ GLG+ +ELP + + + + F KT+AEWC+IFD TDACVTPV
Sbjct: 238 PQFYKLLIEGLGLRHDELPPQMSMSDWPEMKKRFADVFARKTKAEWCQIFDGTDACVTPV 297
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
L+ + H HN RGSFI + G V+P PAP LS TP ++ +P G HT E+LR
Sbjct: 298 LTFEEVAHHDHNKERGSFITDEQG-VSPRPAPLLSDTPAVPS-SQRDPYVGEHTEEILRE 355
Query: 355 FGYSDANIEELIREDVIE 372
FG+S I +L + VIE
Sbjct: 356 FGFSQVEINQLASDKVIE 373
>gi|301768126|ref|XP_002919481.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Ailuropoda
melanoleuca]
Length = 381
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/378 (56%), Positives = 274/378 (72%), Gaps = 11/378 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD--TVGYGKKSLCINL 58
MAL+GI+VLE AGL P P+CGM+L +FGA V+R+D+ G ++D + K+SL ++L
Sbjct: 1 MALRGISVLELAGLGPGPYCGMVLADFGAHVVRVDRLGD---LRDLGVLARAKRSLAVDL 57
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K+ +G +V++ L ++DV+LEPFR GVMEKLQLGP++L K NP+LIYARLSG+GQ G +S
Sbjct: 58 KRPQGAAVLRRLCARTDVVLEPFRPGVMEKLQLGPEILQKENPKLIYARLSGFGQSGRFS 117
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+AGHDINYL LSG+LS +G NP PP NL ADFGGGGLMC LGI+MALFER++SG+G
Sbjct: 118 RVAGHDINYLALSGVLSKIGRNGENPFPPLNLLADFGGGGLMCTLGILMALFERTRSGKG 177
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID NMVEG+AYL S+L +TQ LWD+P+G+NLLDGGA FY TY+T DG FMAVGALE
Sbjct: 178 QVIDANMVEGTAYLSSFLWKTQQIGLWDQPQGQNLLDGGAPFYTTYKTADGGFMAVGALE 237
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFY L+ GLG+ +ELP + + + + F KT+AEWC+IFD TDACVTPV
Sbjct: 238 PQFYKLLIEGLGLRHDELPPQMSMSDWPEMKKRFADVFARKTKAEWCQIFDGTDACVTPV 297
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
L+ + H HN RGSFI + G V+P PAP LS TP ++ +P G HT E+LR
Sbjct: 298 LTFEEVAHHDHNKERGSFITDEQG-VSPRPAPLLSDTPAVPS-SQRDPYVGEHTEEILRE 355
Query: 355 FGYSDANIEELIREDVIE 372
FG+S I +L + VIE
Sbjct: 356 FGFSQVEINQLASDKVIE 373
>gi|225707070|gb|ACO09381.1| Alpha-methylacyl-CoA racemase [Osmerus mordax]
Length = 382
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/376 (56%), Positives = 269/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+E AGLAP PFCGMIL +FGA VIR+D+ DT GK+SL +NLK
Sbjct: 1 MALAGVRVVELAGLAPVPFCGMILADFGAKVIRVDRTKVT-MAMDTQARGKRSLALNLKT 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+SV++ L QSDV+LEP+RKGVMEKL LGP+ L K NPRLIYARL+GYGQ G Y++
Sbjct: 60 PEGVSVLRKLCVQSDVVLEPYRKGVMEKLGLGPEELLKENPRLIYARLTGYGQSGSYAAA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SG+LS+LG R P P NL ADF GGGL CALG+VMAL ERS+SGRGQV
Sbjct: 120 AGHDINYLAMSGLLSMLGRRGEKPYAPLNLVADFAGGGLTCALGVVMALLERSQSGRGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AY+GS++ +++ +W+ PRGEN+LD GA FYDTY+T D ++MAVGA+E Q
Sbjct: 180 IDTSMVEGAAYVGSFMWKSRSIGMWNNPRGENMLDSGAPFYDTYQTSDRKYMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY+QLL GLG+ + +LP + KL T+ F KTQAEW +FD TDACVTPVLS
Sbjct: 240 FYSQLLHGLGLDDADLPSQMSFSDWPKLRQVFTDCFATKTQAEWRAVFDGTDACVTPVLS 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L + +SHPHN R SF+ + G +P PAP LSRTP +P G HTR VL +G
Sbjct: 300 LEEVSSHPHNQQRESFLQDSQGEESPRPAPVLSRTPA-QPCQGRDPFIGEHTRAVLEEYG 358
Query: 357 YSDANIEELIREDVIE 372
Y +I+ ++ V+E
Sbjct: 359 YQPQDIDRMLSTGVLE 374
>gi|47219904|emb|CAF97174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 382
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/376 (56%), Positives = 272/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+E AGLAPAPFCGMIL +FGA VIR+D+ V DT GK+S+ INLK
Sbjct: 1 MALAGVRVIELAGLAPAPFCGMILADFGAKVIRVDRTKGAVSV-DTQARGKRSVAINLKT 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++G++V+K L +SDV+LEP+RKGVMEKL LGP L + NPRLIYARL+GYGQ G Y++
Sbjct: 60 SEGVAVLKKLCVRSDVVLEPYRKGVMEKLGLGPTELLRENPRLIYARLTGYGQSGSYATA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS LG P P NL ADF GGGL CALGIV+AL ER+KSG+GQV
Sbjct: 120 AGHDINYLALSGLLSRLGRSEEKPYAPLNLVADFAGGGLTCALGIVLALLERTKSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AY+GS++ +++ LWD+PRG N+LD GA FYDTY+T DG+++AVGA+E Q
Sbjct: 180 IDASMVEGAAYVGSFVWKSRSIGLWDRPRGRNMLDSGAPFYDTYQTSDGKYVAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVLS 296
FY QLL GL + ELP + +LT+ +F KTQAEW +IFD TDACVTPVLS
Sbjct: 240 FYRQLLKGLDLEAAELPDQMSFSHWPELTKIFAGRFASKTQAEWSKIFDGTDACVTPVLS 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ +SHPHN R SFI + +G +P PAP LSRTP +PA G HT EVL+ FG
Sbjct: 300 FEEVSSHPHNRERASFIKDASGQESPRPAPLLSRTPAEPGCA-LDPAIGEHTAEVLQEFG 358
Query: 357 YSDANIEELIREDVIE 372
+ ++I+ ++ V+E
Sbjct: 359 FRPSDIDRMLAAGVVE 374
>gi|46518506|ref|NP_032563.2| alpha-methylacyl-CoA racemase [Mus musculus]
gi|341940628|sp|O09174.4|AMACR_MOUSE RecName: Full=Alpha-methylacyl-CoA racemase; AltName:
Full=2-methylacyl-CoA racemase
gi|26339226|dbj|BAC33284.1| unnamed protein product [Mus musculus]
gi|26344326|dbj|BAB22072.2| unnamed protein product [Mus musculus]
Length = 381
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/376 (55%), Positives = 275/376 (73%), Gaps = 7/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L+G+ V+E AGLAP PFCGM+L +FGA V+R+++ G+ ++ + GK+SL ++LK+
Sbjct: 1 MVLRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTG--ENFLARGKRSLALDLKR 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++G++V++ + ++DV+LEPFR GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +
Sbjct: 59 SQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKV 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP PP NL ADFGGGGLMC LGIV+ALFER++SGRGQV
Sbjct: 119 AGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S+L +TQ LW +PRG+N+LDGGA FY TY+T DG FMAVGA+E Q
Sbjct: 179 IDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQ 238
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL GLG+ EELP + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 239 FYALLLKGLGLESEELPSQMSSADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 298
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+A H HN R SFI + + +P PAP LSRTP + +P+ G HT EVLR +G
Sbjct: 299 FEEALHHQHNRERASFITDGEQLPSPRPAPLLSRTPAVPS-AKRDPSVGEHTVEVLREYG 357
Query: 357 YSDANIEELIREDVIE 372
+S I +L + ++E
Sbjct: 358 FSQEEILQLHSDRIVE 373
>gi|410213684|gb|JAA04061.1| alpha-methylacyl-CoA racemase [Pan troglodytes]
gi|410263698|gb|JAA19815.1| alpha-methylacyl-CoA racemase [Pan troglodytes]
gi|410303460|gb|JAA30330.1| alpha-methylacyl-CoA racemase [Pan troglodytes]
gi|410348722|gb|JAA40965.1| alpha-methylacyl-CoA racemase [Pan troglodytes]
Length = 382
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/376 (54%), Positives = 272/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFSWL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGG+MCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGVMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYMTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI N V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITNEEQDVSPRPAPLLLNTPAIPSF-KRDPFVGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|405950931|gb|EKC18886.1| Alpha-methylacyl-CoA racemase [Crassostrea gigas]
Length = 379
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/373 (56%), Positives = 269/373 (72%), Gaps = 5/373 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ V+EFAGLAP PFCGMIL++FGA VIRID+ A F D G GK+S+ I++KK
Sbjct: 1 MALRGVKVIEFAGLAPVPFCGMILSDFGAKVIRIDRPHA--FDLDRQGRGKRSIAIDMKK 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+GLS++K L +DV++EPFR GVMEKL LGP L NPRL+YARL+GYGQ+GP S+
Sbjct: 59 KEGLSIVKQLCADADVLIEPFRAGVMEKLGLGPKTLLSENPRLVYARLTGYGQNGPMSTR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ SG+LS LG + P P NL ADF GGG+ CALGIVMAL+ERS+SG+GQV
Sbjct: 119 AGHDINYIATSGVLSYLGRKGEKPHAPVNLLADFAGGGMTCALGIVMALYERSQSGQGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEGSAY+ +WL ++ +W KPRGEN+LDGGA FYDTYET D ++MAVG+LE Q
Sbjct: 179 IDSSMVEGSAYVANWLWKSHKLDIWGKPRGENVLDGGAPFYDTYETADKKYMAVGSLEPQ 238
Query: 241 FYAQLLAGLGMTEEELPQHEVETG--RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
FY +L+ GLG+ +E PQ+ ++ + K TE F KT+ EW EIF +TDAC TPVL
Sbjct: 239 FYVKLIQGLGLNLDEYPQNMTDSNKLKQKFTEVFASKTRDEWTEIFQDTDACCTPVLEPG 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
+A HPHNV SF+ + G P PAPRLSRTPG ++ E P G HT E+L+ G+
Sbjct: 299 EAPLHPHNVTNKSFLQSTDGGFEPGPAPRLSRTPGVDRVLE-APRLGQHTVEILKELGFL 357
Query: 359 DANIEELIREDVI 371
I++ I +V+
Sbjct: 358 GETIQKHIDSEVV 370
>gi|114600715|ref|XP_517837.2| PREDICTED: alpha-methylacyl-CoA racemase isoform 6 [Pan
troglodytes]
Length = 394
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/376 (54%), Positives = 272/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFSWL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGG+MCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGVMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYMTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI N V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITNEEQDVSPRPAPLLLNTPAIPSF-KRDPFVGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|388452424|ref|NP_001253926.1| alpha-methylacyl-CoA racemase [Macaca mulatta]
gi|380790705|gb|AFE67228.1| alpha-methylacyl-CoA racemase isoform 1 [Macaca mulatta]
Length = 382
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/376 (55%), Positives = 269/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI VLE AGLAP PFC M+L +FGA V+R+++ G+ + +G GK+SL ++LK+
Sbjct: 1 MALQGILVLELAGLAPGPFCAMVLADFGARVVRVERPGSH-YDVSRLGRGKRSLALDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR GVMEKLQLGP++L + NPRLIYARL+G+GQ G +S +
Sbjct: 60 PRGAAVLRRLCARSDVLLEPFRSGVMEKLQLGPEILQRDNPRLIYARLTGFGQSGSFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMC LGI+MALFER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRNGENPYAPLNLLADFAGGGLMCVLGIMMALFERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNILDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFAAVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L + H H RGSFI N ++P PAP LS TP + +P G HT E+L FG
Sbjct: 300 LEEVVHHDHIKERGSFITNEEQSMSPRPAPLLSNTPAIPSF-KRDPFVGEHTEEILDEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I++L + +IE
Sbjct: 359 FSREEIDQLKSDKIIE 374
>gi|42794625|ref|NP_055139.4| alpha-methylacyl-CoA racemase isoform 1 [Homo sapiens]
gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN RecName: Full=Alpha-methylacyl-CoA racemase; AltName:
Full=2-methylacyl-CoA racemase
Length = 382
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/376 (54%), Positives = 270/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F EKT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFIGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|397495408|ref|XP_003818548.1| PREDICTED: alpha-methylacyl-CoA racemase [Pan paniscus]
Length = 394
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/376 (54%), Positives = 272/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFSWL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGG+MCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGVMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYMTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI N V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITNEEQDVSPRPAPLLLNTPAIPSF-KRDPFVGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|119631223|gb|EAX10818.1| alpha-methylacyl-CoA racemase, isoform CRA_c [Homo sapiens]
Length = 382
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/376 (54%), Positives = 271/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVMELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFIGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|148342485|gb|ABQ59031.1| AMACR protein [Homo sapiens]
Length = 382
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/376 (54%), Positives = 270/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLTLSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F EKT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFIGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|6653128|gb|AAF22610.1|AF158378_1 alpha-methylacyl-CoA racemase [Homo sapiens]
Length = 382
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/376 (54%), Positives = 271/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFIGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|266456254|ref|NP_001161067.1| alpha-methylacyl-CoA racemase isoform 3 [Homo sapiens]
Length = 394
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/376 (54%), Positives = 270/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F EKT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFIGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|148671341|gb|EDL03288.1| alpha-methylacyl-CoA racemase [Mus musculus]
Length = 369
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/369 (56%), Positives = 271/369 (73%), Gaps = 7/369 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L+G+ V+E AGLAP PFCGM+L +FGA V+R+++ G+ ++ + GK+SL ++LK+
Sbjct: 1 MVLRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTG--ENFLARGKRSLALDLKR 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++G++V++ L ++DV+LEPFR GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +
Sbjct: 59 SQGVTVLRRLCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKV 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP PP NL ADFGGGGLMC LGIV+ALFER++SGRGQV
Sbjct: 119 AGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S+L +TQ LW +PRG+N+LDGGA FY TY+T DG FMAVGA+E Q
Sbjct: 179 IDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQ 238
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL GLG+ EELP + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 239 FYALLLKGLGLESEELPSQMSSADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 298
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+A H HN R SFI + + +P PAP LSRTP + +P+ G HT EVLR +G
Sbjct: 299 FEEALHHQHNRERASFITDGEQLPSPRPAPLLSRTPAVPS-AKRDPSVGEHTVEVLREYG 357
Query: 357 YSDANIEEL 365
+S I +L
Sbjct: 358 FSQEEILQL 366
>gi|410903500|ref|XP_003965231.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Takifugu rubripes]
Length = 382
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 270/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+E AGLAPAPFCGM+L +FGA VIR+D+ DT GKKS+ INLK
Sbjct: 1 MALAGVRVIELAGLAPAPFCGMVLADFGAKVIRVDRTKVS-MALDTQARGKKSVAINLKT 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G++V+K L QSDV+LEP+RKGVMEKL LGP L + NP LIYARL+GYGQ G Y++
Sbjct: 60 PEGVAVLKKLCVQSDVVLEPYRKGVMEKLGLGPRELLRENPCLIYARLTGYGQSGSYATA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SG+LS LG P P NL ADF GGGL CALGIV+AL ER+KSG+GQV
Sbjct: 120 AGHDINYLAISGLLSRLGRSEEKPYAPLNLVADFAGGGLTCALGIVLALLERTKSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AY+GS++ +++ +WD+PRG+N+LD GA FYDTY+T DG+ MAVGA+E Q
Sbjct: 180 IDASMVEGAAYVGSFVWKSRSIGMWDRPRGQNMLDSGAPFYDTYQTSDGKHMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLT----EKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY QLL GL + ELP + +LT ++F K+QAEW +IFD TDACVTPVL+
Sbjct: 240 FYRQLLKGLELDAAELPDQMSFSDWPELTKIFADRFASKSQAEWSQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ +SHPHN R SFI + G +P PAP LSRTP + +PA G HT EVL+ +G
Sbjct: 300 FEEVSSHPHNRERASFIEDAGGQESPRPAPVLSRTPAEPGLA-LDPAIGEHTLEVLQEYG 358
Query: 357 YSDANIEELIREDVIE 372
+ A+I++++ VIE
Sbjct: 359 FKRADIDQMLAAGVIE 374
>gi|401709963|ref|NP_036948.2| alpha-methylacyl-CoA racemase [Rattus norvegicus]
gi|149027315|gb|EDL82982.1| alpha-methylacyl-CoA racemase [Rattus norvegicus]
Length = 382
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/376 (56%), Positives = 273/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ VLE AGLAP PFCGMIL +FGA V+ +D+ G+ + GK+SL ++LK+
Sbjct: 1 MALRGVRVLELAGLAPGPFCGMILADFGAEVVLVDRLGSVNH-PSHLARGKRSLALDLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ G +V++ + ++DV+LEPFR GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +
Sbjct: 60 SPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLQQDNPKLIYARLSGFGQSGIFSKV 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSG+LS +G NP PP NL ADFGGGGLMC LGI++ALFER++SG GQV
Sbjct: 120 AGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL ++L +TQ LW +PRG+NLLDGGA FY TY+T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY LL GLG+ EELP Q +E + K + F KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYTLLLKGLGLESEELPSQMSIEDWPEVKKKFADVFARKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L +A H HN RGSFI + +P PAP+LSRTP + +P+ G HT EVL+ +G
Sbjct: 300 LEEALHHQHNRERGSFITDEEQHASPRPAPQLSRTPAVPS-AKRDPSVGEHTVEVLKDYG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSQEEIHQLHSDRIIE 374
>gi|162951990|ref|NP_001106103.1| alpha-methylacyl-CoA racemase [Papio anubis]
gi|148361518|gb|ABQ59331.1| alpha-methylacyl-CoA racemase [Papio anubis]
Length = 382
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/376 (54%), Positives = 269/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI V+E AGLAP PFC M+L +FGA V+R+++ G+ + +G GK+SL ++LK+
Sbjct: 1 MALQGILVVELAGLAPGPFCAMVLADFGARVVRVERPGSH-YDVSRLGRGKRSLALDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR GVMEKLQLGP++L + NPRLIYARL+G+GQ G +S +
Sbjct: 60 PRGAAVLRRLCARSDVLLEPFRSGVMEKLQLGPEILQRDNPRLIYARLTGFGQSGSFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+L +G NP P NL ADF GGGLMC LGI+MALFER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLPKIGRNGENPYAPLNLLADFAGGGLMCVLGIMMALFERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNILDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFAAVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L + H H+ RGSFI N ++P PAP LS TP + +P G HT E+L FG
Sbjct: 300 LEEVVHHDHSKERGSFITNEEQSMSPRPAPLLSNTPAIPSF-KRDPFVGEHTEEILDEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I++L + +IE
Sbjct: 359 FSREEIDQLKSDKIIE 374
>gi|62825322|gb|AAY16192.1| alpha-methyl-acyl-CoA racemase [Homo sapiens]
Length = 394
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/376 (54%), Positives = 271/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFIGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|13637497|sp|P70473.3|AMACR_RAT RecName: Full=Alpha-methylacyl-CoA racemase; AltName:
Full=2-arylpropionyl-CoA epimerase; AltName:
Full=2-methylacyl-CoA racemase
Length = 382
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/376 (56%), Positives = 272/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ VLE AGLAP PFCGMIL +FGA V+ +D+ G+ + GK+SL ++LK+
Sbjct: 1 MALRGVRVLELAGLAPGPFCGMILADFGAEVVLVDRLGSVNH-PSHLARGKRSLALDLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ G +V++ + ++DV+LEPFR GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +
Sbjct: 60 SPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLRQDNPKLIYARLSGFGQSGIFSKV 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSG+LS +G NP PP NL ADFGGGGLMC LGI++ALFER++SG GQV
Sbjct: 120 AGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL ++L +TQ LW +PRG+NLLDGGA FY TY+T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY LL GLG+ EELP Q +E + K + F KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYTLLLKGLGLESEELPSQMSIEDWPEMKKKFADVFARKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L +A H HN RGSFI + P PAP+LSRTP + +P+ G HT EVL+ +G
Sbjct: 300 LEEALHHQHNRERGSFITDEEQHACPRPAPQLSRTPAVPS-AKRDPSVGEHTVEVLKDYG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSQEEIHQLHSDRIIE 374
>gi|62897221|dbj|BAD96551.1| alpha-methylacyl-CoA racemase isoform 1 variant [Homo sapiens]
Length = 382
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/376 (54%), Positives = 269/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL A F GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLAGFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F EKT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFIGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|291290961|ref|NP_001167512.1| alpha-methylacyl-CoA racemase [Xenopus laevis]
gi|163916364|gb|AAI57716.1| Unknown (protein for MGC:181623) [Xenopus laevis]
Length = 381
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/370 (57%), Positives = 271/370 (73%), Gaps = 9/370 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL GI VLE AGLAPAPFCGMIL +FGA VIR+DK G+ DT+ GK+S+ +NLK
Sbjct: 1 MALTGIRVLELAGLAPAPFCGMILADFGAKVIRVDKAGSGT-TMDTLARGKRSIAVNLKS 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+S++K L +SDV++EPFR GVME L LGPD++ + NP+LIYARL+G+GQ G Y+
Sbjct: 60 PEGISLLKKLCKKSDVLIEPFRHGVMENLGLGPDIMLQENPQLIYARLTGFGQSGKYAKA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ +SG+LS LG +N +PTPP NL ADF GGGL CALGIVM+LFER+KSG+GQV
Sbjct: 120 AGHDINYVSISGLLSKLGDKN-SPTPPLNLLADFAGGGLTCALGIVMSLFERTKSGKGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
IDC+MVEG+AYLGS++ ++Q LW GEN+LDGG+ FY TY+T DG+FMAVGA+E+Q
Sbjct: 179 IDCSMVEGAAYLGSFVWKSQKLGLWSNSPGENMLDGGSPFYSTYKTADGKFMAVGAIETQ 238
Query: 241 FYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA+LL GL + ELP H++ + +KF+EKTQAEW IFD TDACVTPVL
Sbjct: 239 FYAELLKGLELDASELP-HQMSFSDWPEMKKIFAQKFREKTQAEWGRIFDGTDACVTPVL 297
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
H HN RGSFI + G ++P P+P LSRTP + + +P G HT E+L +
Sbjct: 298 CFDDVALHQHNEERGSFICDDQGELSPRPSPVLSRTP-AAPTSSRDPLVGEHTHEILAEY 356
Query: 356 GYSDANIEEL 365
G+S+ I +L
Sbjct: 357 GFSEREISDL 366
>gi|380030162|ref|XP_003698724.1| PREDICTED: LOW QUALITY PROTEIN: alpha-methylacyl-CoA racemase-like
[Apis florea]
Length = 386
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/387 (54%), Positives = 272/387 (70%), Gaps = 10/387 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLE AG+AP PFCGMILNEFGA+VI++DK D + +GK+S+ +NLK
Sbjct: 1 MPLKGIKVLELAGIAPGPFCGMILNEFGASVIKVDKIDGFYNTIDVLSHGKRSIALNLKT 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++GL + K L+NQSDVI++P+R G+MEKL+LGP L ++N RLIY RL+G+GQ+GPY++M
Sbjct: 61 SQGLDIFKRLSNQSDVIIDPYRAGIMEKLKLGPKELMETNKRLIYVRLTGFGQNGPYANM 120
Query: 121 AGHDINYLG------LSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
AGHDIN+LG SG+LSL G N+ PTPP NL DF G L+ GI++ALFERSK
Sbjct: 121 AGHDINFLGYLYFXXYSGLLSLFGRYNQKPTPPANL-TDF-TGALIGVFGIMLALFERSK 178
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTF-LWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
S GQ+ID +MV+GSAY+GSW+ R+Q+ F LW PRG+N+LD GAHFYDTYETKD +++
Sbjct: 179 SNIGQIIDASMVDGSAYIGSWMYRSQNIFGLWGNPRGKNILDSGAHFYDTYETKDKQYIC 238
Query: 234 VGALESQFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
VGA+ES+FY L LG++ +E+PQ + E R KL + FK+KTQAEWC IFD TDACVT
Sbjct: 239 VGAIESKFYEIFLEKLGISSDEIPQFDKFEKNREKLEKIFKQKTQAEWCAIFDGTDACVT 298
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL+L H HN R +F G V P PAPRLSRTPG SK + P G HT E+L
Sbjct: 299 PVLNLKNVALHAHNKERNTFKIEDDGSVTPNPAPRLSRTPGISKKYQKIPELGEHTIEIL 358
Query: 353 RHFGYSDANIEELIREDVIEETIEMNS 379
+ I I ++ + ++ +S
Sbjct: 359 NELNFKHEEITNFIANGIVNQKMKRSS 385
>gi|197097396|ref|NP_001124714.1| alpha-methylacyl-CoA racemase [Pongo abelii]
gi|55725647|emb|CAH89605.1| hypothetical protein [Pongo abelii]
Length = 382
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/376 (54%), Positives = 271/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC +L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAKVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGAAVLRRLCERSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGAAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD DACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAKKTKAEWCQIFDGADACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L + H H+ RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 LEEVVHHDHHKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFVGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|441614834|ref|XP_003274976.2| PREDICTED: LOW QUALITY PROTEIN: alpha-methylacyl-CoA racemase
isoform 1 [Nomascus leucogenys]
Length = 394
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/376 (54%), Positives = 268/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G + + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGFR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR GVMEKLQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGAAVLRRLCERSDVLLEPFRGGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALFER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S+L +TQ LW+ RG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDASMVEGAAYLSSFLWKTQKLSLWEASRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI N ++P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITNEEQDLSPRPAPLLLNTPAIPSF-KRDPFVGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLYSDKIIE 374
>gi|4204097|gb|AAD10205.1| alpha-methylacyl-CoA racemase [Homo sapiens]
Length = 382
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/376 (53%), Positives = 270/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVMELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++ +GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTDKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDADMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPSQMSTDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFIGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|193785472|dbj|BAG50838.1| unnamed protein product [Homo sapiens]
Length = 382
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/376 (54%), Positives = 270/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVMELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++ +GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTDKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFIGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEICQLNSDKIIE 374
>gi|344272337|ref|XP_003407989.1| PREDICTED: alpha-methylacyl-CoA racemase [Loxodonta africana]
Length = 382
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/379 (57%), Positives = 273/379 (72%), Gaps = 12/379 (3%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ VLE AGLAP PFCGM+L +FGA VIR+D G+ + +G GK+SL +NLK+
Sbjct: 1 MALWGVRVLELAGLAPGPFCGMVLADFGAQVIRVDPPGSHGDISQ-LGRGKRSLVVNLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L Q+DV+LEPFR GVMEKLQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PQGAAVLRRLCAQADVVLEPFRGGVMEKLQLGPEILQQENPRLIYARLSGFGQSGRFSGV 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDIN+L LSG+LS +G NP P NL ADFGGGGLMC LGIVMALFER++SGRGQV
Sbjct: 120 AGHDINFLALSGVLSKIGRSGENPYAPLNLLADFGGGGLMCTLGIVMALFERTRSGRGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S+L +TQ LW++PRG+NLLDGGA FY TY+T DG FMAVGALE Q
Sbjct: 180 IDASMVEGTAYLSSFLWKTQKVGLWEQPRGQNLLDGGAPFYTTYQTADGEFMAVGALEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE-------KTQAEWCEIFDNTDACVTP 293
FY L+ GLG+ ELP + A E KE KT+AEWC+IF+ TDACVTP
Sbjct: 240 FYKLLIKGLGLNSAELPN---QMSMADWPELKKEFAAAFAKKTKAEWCQIFEGTDACVTP 296
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VL++ + H H+ RGSFI + V+P PAP LSRTP T + +P+ G HT E+L+
Sbjct: 297 VLTVEEVAHHDHHRERGSFITDGEQGVSPRPAPLLSRTPATPSF-QRDPSVGEHTEEILK 355
Query: 354 HFGYSDANIEELIREDVIE 372
FG+S I++L +IE
Sbjct: 356 EFGFSQEEIDQLNSAKIIE 374
>gi|410949621|ref|XP_003981519.1| PREDICTED: alpha-methylacyl-CoA racemase [Felis catus]
Length = 382
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/376 (55%), Positives = 269/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI VLE AGLAP PFCGM+L +FGA V+R+D+ GA+ V + GK+SL +NLK+
Sbjct: 1 MALQGIRVLELAGLAPGPFCGMVLADFGAQVVRVDRPGARRDV-SFMARGKRSLVVNLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G V++ L Q+DV+LEPFR G +KLQLGP+VL + NP+LIYARLSG+GQ G + +
Sbjct: 60 QDGALVLRRLCAQADVVLEPFRHGEPQKLQLGPEVLQRENPKLIYARLSGFGQSGRFCRV 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSGILS +G NP P NL ADFGGGGL+C LGI++ALF+R++SG+GQV
Sbjct: 120 AGHDINYLALSGILSKIGRSGENPYAPLNLLADFGGGGLICTLGILLALFQRTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S+L ++Q LW++PRG+N+LDGGA FY TY+T DG FMAVGA+E Q
Sbjct: 180 IDASMVEGTAYLSSFLWKSQQVGLWERPRGQNMLDGGAPFYTTYKTADGGFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP T + + E F +KT+ EWC+IFD TDACVTPVL+
Sbjct: 240 FYKLLIEGLGLKSDELPNQMSMTDWPEMKRRFAEVFAKKTKEEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ T H HN RGSFI + V+P PAP LS TP ++ +P G HT E+L+ FG
Sbjct: 300 FEEVTQHDHNKERGSFITDEEQSVSPRPAPLLSDTPAVPS-SKRDPFVGEHTEEILQEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSQVEINQLTSDKIIE 374
>gi|321475345|gb|EFX86308.1| hypothetical protein DAPPUDRAFT_308522 [Daphnia pulex]
Length = 382
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/378 (56%), Positives = 276/378 (73%), Gaps = 8/378 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MALKGI V+E AGLAPAPFCGMIL++FGA VIR+DK A P D G GK+S+ +NLK
Sbjct: 1 MALKGIKVIEMAGLAPAPFCGMILSDFGADVIRVDKANAPPL--DRQGRGKRSIALNLKS 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G++++ L +++DV++EPFR GVMEKL LGP VL NPRLIYARL+G+GQ+GPYSSM
Sbjct: 59 PEGIAIVHKLCSKADVLIEPFRPGVMEKLGLGPSVLLSQNPRLIYARLTGFGQNGPYSSM 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSG+LSLLG NP PP NL ADF GGGL+CA+GI MALFER KS GQ+
Sbjct: 119 AGHDINYVALSGLLSLLGRHKSNPLPPQNLLADFAGGGLLCAMGIAMALFEREKSNMGQI 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AY+GSW+ +++D +W RG++ DGG H+Y+TYETKDG+ M VGALE Q
Sbjct: 179 IDASMVEGAAYIGSWIFKSRDMPVWSGVRGKSWFDGGIHYYETYETKDGKHMTVGALEPQ 238
Query: 241 FYAQLL-----AGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY +L+ AG+ ++ P + E +AK+T+ F +KTQ EW IFD TDACV PVL
Sbjct: 239 FYQELIQRLTDAGVENVPDQYPD-DSEEAKAKMTDIFLQKTQEEWRTIFDGTDACVAPVL 297
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
SL +A H HN+ RGSFI N G PAPAPRLSRTP ++ P+ G +TRE+L H
Sbjct: 298 SLDEAPFHEHNLSRGSFIRNTKGQYDPAPAPRLSRTPAQAQNNIEEPSIGENTREILMHM 357
Query: 356 GYSDANIEELIREDVIEE 373
GY+ +I++ ++ V +
Sbjct: 358 GYTTEDIQKFVKNKVAHQ 375
>gi|149732814|ref|XP_001500301.1| PREDICTED: alpha-methylacyl-CoA racemase [Equus caballus]
Length = 390
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/386 (54%), Positives = 273/386 (70%), Gaps = 14/386 (3%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ VLE AGL P PFCGM+L +FGA V+R+D+ G + + GK+SL ++LK+
Sbjct: 1 MALRGVRVLELAGLVPGPFCGMVLADFGAQVVRVDRTGVRGGT-SYLARGKRSLALDLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L ++DV+L+PFR GVMEKLQLGP++L + NP LIYARLSG+GQ G +S +
Sbjct: 60 PRGAAVLRRLCTRADVVLDPFRAGVMEKLQLGPEILQRENPSLIYARLSGFGQLGRFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS LG P P NL ADFGGGGLMCALGI+MALFER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLSKLGKSGDKPCAPLNLLADFGGGGLMCALGIMMALFERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL ++L +TQ+ LW++PRG+N+LDGGA FY TY T D FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSTFLWQTQEMGLWEQPRGQNMLDGGAPFYTTYRTADEEFMAVGAIEPQ 239
Query: 241 FYAQL--------LAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTD 288
FY L L+GLG+ EELP T + K + F +KT+AEWC IFD TD
Sbjct: 240 FYELLIKDKNCVFLSGLGLKSEELPNQMSITDWPEMKKKFADIFAKKTKAEWCRIFDGTD 299
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
ACVTPVLSL +A H HN RGSFI + V+P PAP LS TP ++ +P G HT
Sbjct: 300 ACVTPVLSLEEAVQHGHNKERGSFITHGEQGVSPRPAPLLSNTPAIPS-SKRDPFVGEHT 358
Query: 349 REVLRHFGYSDANIEELIREDVIEET 374
E+LR FG+S I++L + +IE +
Sbjct: 359 EEILREFGFSQEEIDQLNSDKIIESS 384
>gi|332374624|gb|AEE62453.1| unknown [Dendroctonus ponderosae]
Length = 374
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/372 (56%), Positives = 262/372 (70%), Gaps = 7/372 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL GI V+EFAGLAPAPFCGM+L +FGA+VIRIDK G P D + GKKS+ +NLK
Sbjct: 1 MALNGIKVVEFAGLAPAPFCGMVLADFGASVIRIDKTGP-PAQFDFLDNGKKSVSLNLKS 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ V++ L +SDV++EPFR GVMEKL LGP VL NPRL+YARL+G+GQ G +
Sbjct: 60 PEGVKVVRRLIQRSDVLIEPFRAGVMEKLGLGPKVLMADNPRLVYARLTGFGQKGALAKH 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDIN+L LSG+LSL G + ++PT P NLAADFGGGGL+CALGI +AL ER KSG+GQ+
Sbjct: 120 AGHDINFLALSGLLSLFGRKGQSPTFPVNLAADFGGGGLICALGIALALLERHKSGKGQI 179
Query: 181 IDCNMVEGSAYLGSWLTRTQ-DTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
+DC+M G AYLGS+L R+Q T LW RG NLLD GA YD Y+TKD ++MAV A+E
Sbjct: 180 VDCSMTHGVAYLGSFLYRSQGSTLLWGNERGANLLDSGASCYDVYKTKDQKYMAVAAVEP 239
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
QFY+QLL L +TEEE PQ + T RA F +KTQ +WCE+FD DACVTPVL L +
Sbjct: 240 QFYSQLLRQLNITEEEAPQMDYATSRALFERAFLQKTQKQWCEVFDQVDACVTPVLDLDE 299
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSD 359
A HPHN +G+F AP PAP+LSRTP S +P G HT EVL GY+
Sbjct: 300 APLHPHNREQGAF-----SGPAPNPAPQLSRTPAQSHAHLRSPKIGEHTVEVLSDLGYTG 354
Query: 360 ANIEELIREDVI 371
I++L + +
Sbjct: 355 DQIQQLQSQGAV 366
>gi|73954345|ref|XP_855429.1| PREDICTED: alpha-methylacyl-CoA racemase [Canis lupus familiaris]
Length = 382
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/376 (54%), Positives = 268/376 (71%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G++VLE AGLAP P CGMIL +FGA V+R+D+ GA+ + + + GK+SL ++L++
Sbjct: 1 MALRGLSVLELAGLAPGPLCGMILADFGARVVRVDRLGARGNM-NILARGKRSLALDLQR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L ++DV+L+P+R GVMEKLQLGP++L + NPRLIYARLSG+GQ G +S
Sbjct: 60 PQGAAVLRPLCARADVVLDPYRHGVMEKLQLGPEILQRENPRLIYARLSGFGQSGRFSKT 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDIN+L LSG+LS +G NP P NL ADFGGG L+C LGI+MALFER++SG+GQV
Sbjct: 120 AGHDINFLALSGVLSKIGGSGENPYAPLNLLADFGGGALICTLGILMALFERTRSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L + LW+ PRG+NLLDGGA FY TY T DG FMAVGALE Q
Sbjct: 180 IDANMVEGTAYLSSFLWHSLQMGLWENPRGQNLLDGGAPFYTTYRTADGGFMAVGALEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + + + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYKLLIKGLGLKSDELPDQMSMSDWPEMKKRFADIFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI N V+P PAP LS TP + NP G HT E+LR FG
Sbjct: 300 FEEVIHHDHNKERGSFIINEEQSVSPRPAPLLSGTPAVPS-CKRNPFVGEHTEEILREFG 358
Query: 357 YSDANIEELIREDVIE 372
++ I +L + +IE
Sbjct: 359 FNQTEINQLTSDKIIE 374
>gi|334325721|ref|XP_001365665.2| PREDICTED: alpha-methylacyl-CoA racemase-like [Monodelphis
domestica]
Length = 389
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/382 (54%), Positives = 269/382 (70%), Gaps = 11/382 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDT------VGYGKKSL 54
M L+G+ VLE AGLAP P CGMIL +FGA VIR+D+ + GK+SL
Sbjct: 1 MILRGVRVLELAGLAPGPHCGMILADFGAHVIRVDRPSNGGTKWIGGGGVKWLARGKRSL 60
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK+ +G++VM+ L Q DV+LEP+R+GVME+ LGP++L K NPRLIYARL+G+GQ
Sbjct: 61 ILDLKRPEGVTVMRKLCRQVDVVLEPYRQGVMEEFGLGPEILQKDNPRLIYARLTGFGQS 120
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
G S +AGHDINYL LSG+LS LG N P P NL ADFGGG L CALGIV+AL+ER++
Sbjct: 121 GRLSKVAGHDINYLALSGVLSKLGRSNETPYAPLNLLADFGGGSLTCALGIVLALYERTQ 180
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
SG+GQVID NMVEG+AYL S+L ++Q+ LW +PRG+NLLD GA FY+TY T DG+FMAV
Sbjct: 181 SGKGQVIDANMVEGTAYLSSFLWKSQNAGLWSQPRGKNLLDSGAPFYETYRTSDGKFMAV 240
Query: 235 GALESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
GA+E QFYA L+ GLG+ ELP + E + K + F +KTQAEWC+IF TDAC
Sbjct: 241 GAIEPQFYALLINGLGLNCAELPHQWSISDWEEMKKKFADTFAKKTQAEWCKIFGGTDAC 300
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
VTP+LSL +AT + HN+ RG+FI + V+P PAP LSRTP T+ +P G HT E
Sbjct: 301 VTPILSLEEATLNEHNLERGTFITDEDHKVSPRPAPLLSRTPAVPS-TKRDPLEGEHTIE 359
Query: 351 VLRHFGYSDANIEELIREDVIE 372
+L+ FG+S I +L VIE
Sbjct: 360 ILQEFGFSQEEINQLNLAKVIE 381
>gi|71895383|ref|NP_001026619.1| alpha-methylacyl-CoA racemase [Gallus gallus]
gi|53130402|emb|CAG31530.1| hypothetical protein RCJMB04_7i6 [Gallus gallus]
Length = 383
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/378 (53%), Positives = 264/378 (69%), Gaps = 5/378 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ VLE AGLAPAP CGMIL +FGA V+R+D+ D G GK+SL ++LK+
Sbjct: 1 MALSGLRVLELAGLAPAPLCGMILADFGARVVRVDRAPRSAVATDVQGRGKRSLALDLKR 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G + ++ L + +DV++EPFR GVMEKL LGP+VL NPRLIYARL+G+GQ G Y+
Sbjct: 61 PPGAAALRRLCSGADVLIEPFRHGVMEKLGLGPEVLLHENPRLIYARLTGFGQTGKYAKS 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSG+LS LG + NP P NL ADF GGG++CALGI++AL+ER+ SG+GQV
Sbjct: 121 AGHDINYVALSGVLSKLGRKGENPYAPLNLLADFAGGGVLCALGIIIALYERTISGKGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +MVEG AY+ S+L ++Q+ LW++PRGENLLD GA FY+TY+T DG+FMAVGA+E Q
Sbjct: 181 VDASMVEGIAYISSFLWKSQNLGLWNRPRGENLLDSGAPFYETYKTSDGKFMAVGAIEPQ 240
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY QL+ GLG+ ++LP + + K F +KTQ+EWC IFD TDACVTPVLS
Sbjct: 241 FYDQLIKGLGLDSDKLPSQLSFSDWPEMKKKFASIFAQKTQSEWCSIFDGTDACVTPVLS 300
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
A H HN R SFI N ++P PAP LSRTP + +P G HT E+L +G
Sbjct: 301 FDDAPLHQHNKQRSSFIKNDQEEISPRPAPLLSRTPAVPS-CKRDPFIGEHTEEILLEYG 359
Query: 357 YSDANIEELIREDVIEET 374
++ I +L + VIE +
Sbjct: 360 FTQEEIAKLYSDKVIESS 377
>gi|432885846|ref|XP_004074785.1| PREDICTED: LOW QUALITY PROTEIN: alpha-methylacyl-CoA racemase-like
[Oryzias latipes]
Length = 383
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/378 (56%), Positives = 270/378 (71%), Gaps = 9/378 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+E AGLAPAPFCGMIL +FGA VIR+D+ + DT+ GK S+ INLK
Sbjct: 1 MALTGVRVIELAGLAPAPFCGMILADFGAKVIRVDRTKTLTNL-DTLARGKLSVAINLKT 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++G+S++KNL QSDV+LEP+RKGVMEKL LGP L K NPRLIYARL+GYGQ G ++S
Sbjct: 60 SEGISLLKNLCVQSDVVLEPYRKGVMEKLGLGPHELLKQNPRLIYARLTGYGQSGCFASA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPT-PPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ +SG + G R+ + T P NL ADF GGGL CALGIV+ALFER+KSG+GQ
Sbjct: 120 AGHDINYVAMSGNNTQSGXRSSDNTFSPLNLLADFAGGGLTCALGIVLALFERTKSGKGQ 179
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
+ID +MVEG+AY GS++ ++ LW++ RG+N+LD GA FYDTY T DG+++AVGALE
Sbjct: 180 IIDASMVEGAAYTGSFVWKSHSIGLWERDRGQNMLDSGAPFYDTYRTLDGKYIAVGALEP 239
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFY QLL GL + +EELP ++ G R TE+F KTQAEW IFD DACVTPV
Sbjct: 240 QFYDQLLKGLELEDEELPP-QMSVGDWPELRRVFTERFASKTQAEWSRIFDKIDACVTPV 298
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LS + +SHPHN RGSF+ + G P PAP LSRTP +T NP G HT +VL
Sbjct: 299 LSFDEVSSHPHNQERGSFMKDSEGAECPRPAPVLSRTPAEPSLTS-NPGVGEHTVKVLEE 357
Query: 355 FGYSDANIEELIREDVIE 372
+ ++ A I +L+ VIE
Sbjct: 358 YNFTSAEINKLLAAGVIE 375
>gi|48104556|ref|XP_395802.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Apis mellifera]
Length = 380
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/381 (55%), Positives = 273/381 (71%), Gaps = 4/381 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLE AG+AP PFCGMILNEFGA+VI++DK D + +GK+S+ +NLK
Sbjct: 1 MPLKGIKVLELAGIAPGPFCGMILNEFGASVIKVDKIDGFYNTIDILSHGKRSIALNLKT 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++GL + K L QSDVI++P+R GVMEKL+LGP L + N RLIYARL+G+GQ+GPY++M
Sbjct: 61 SQGLDIFKKLTKQSDVIIDPYRAGVMEKLKLGPKELMEINKRLIYARLTGFGQNGPYANM 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDIN+LGLSG+LSL G N+ PTPP NL DF G L+CA GI++ALFERSKS GQ+
Sbjct: 121 AGHDINFLGLSGLLSLFGRYNQKPTPPVNL-TDF-SGALICAFGIILALFERSKSNIGQI 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTF-LWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
ID +MV+GSAY+GSW+ R+Q+ F LW RG+N+LD GAHFYDTYETKD +++ VGA+ES
Sbjct: 179 IDASMVDGSAYIGSWMYRSQNIFGLWGNSRGKNILDSGAHFYDTYETKDKQYICVGAIES 238
Query: 240 QFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+FY L LG++ +ELPQ + E R KL + FK+KTQAEWC IFD TDACVTPVL+L
Sbjct: 239 KFYKIFLEKLGISSDELPQFDKFEKNREKLEKIFKQKTQAEWCVIFDGTDACVTPVLNLK 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
H HN R +F G+V P PAPRLSRTPG SK + P G HT E+L +
Sbjct: 299 NVALHAHNKERNTFKIEDDGLVTPNPAPRLSRTPGISKKYQKIPELGEHTIEILGELNFK 358
Query: 359 DANIEELIREDVIEETIEMNS 379
I I ++ + ++ +S
Sbjct: 359 HEEITNFIANGIVNQKMKRSS 379
>gi|395840257|ref|XP_003792979.1| PREDICTED: alpha-methylacyl-CoA racemase [Otolemur garnettii]
Length = 379
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/377 (55%), Positives = 274/377 (72%), Gaps = 11/377 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L+GI V+E AGLAP PFCGM+L +FGA V+R+D+ G V + GK+SL ++LK+
Sbjct: 1 MPLRGIQVVELAGLAPGPFCGMVLADFGAQVVRVDRPGGSGDVSH-LSRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L ++DV+LEPFR+GVMEKLQLGP++L + NP+LIYARLSG+GQ G +S +
Sbjct: 60 PRGAAVLRRLCARADVVLEPFRRGVMEKLQLGPEILQRENPKLIYARLSGFGQSGRFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G + NP P NL ADFGGGGLMCALGI+MALFER++SG+GQV
Sbjct: 120 AGHDINYLALSGVLSKIG-SSENPYAPPNLVADFGGGGLMCALGIMMALFERTRSGKGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG AYL S+L ++Q LW +PRG+NLLDGGA FY Y+T DG FMAVGALE Q
Sbjct: 179 IDANMVEGVAYLSSFLWKSQK--LWSEPRGQNLLDGGAPFYTVYKTADGEFMAVGALEPQ 236
Query: 241 FYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY LL GLG+ +ELP H++ T + + F +KT+AEWC IFD TDACVTPVL
Sbjct: 237 FYELLLKGLGLKSDELP-HQMSTEHWPEMKKLFVDVFAKKTKAEWCHIFDGTDACVTPVL 295
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+ +A H HN RGSFI + V+P PAP LS TP + + +P G H+ E+L+ F
Sbjct: 296 TFEEAAHHDHNQERGSFITDEEQGVSPRPAPLLSDTPAIPSL-KRDPLVGEHSEEILKEF 354
Query: 356 GYSDANIEELIREDVIE 372
G+S I++L + +IE
Sbjct: 355 GFSQEEIDQLNADKIIE 371
>gi|291395215|ref|XP_002714167.1| PREDICTED: AMACR protein-like [Oryctolagus cuniculus]
Length = 382
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/375 (56%), Positives = 277/375 (73%), Gaps = 6/375 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI VLE AGLAPAPFCGMIL +FGA V+R+D+ G+ V + GK+SL ++L++
Sbjct: 1 MALRGICVLELAGLAPAPFCGMILADFGAQVVRVDRPGSSGDVS-RLSRGKRSLVLDLQR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+SV++ L ++DV+LEPFR GVMEKL LGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PQGVSVLRRLCARADVLLEPFRCGVMEKLNLGPEILQQENPRLIYARLSGFGQSGRFSRV 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSGILS LG ++NP P NL ADFGGGGL+CALGIVMALFER++SG+GQ+
Sbjct: 120 AGHDINYLALSGILSKLGNSDKNPYAPLNLLADFGGGGLLCALGIVMALFERTRSGKGQI 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S++ +TQ + LW++PRG+NLLDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFVWKTQKSGLWEQPRGQNLLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYQLLIKGLGLKSDELPNQMSMADWPEMKKKFADVFAKKTKAEWCKIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+A +H HN RGSFI + V+P PAP LS TP + + + G HT E+L+ FG
Sbjct: 300 FEEAVAHEHNRERGSFIMDEGQNVSPRPAPLLSSTPALPSV-KRDAFAGEHTEEILKEFG 358
Query: 357 YSDANIEELIREDVI 371
++ I +L + +I
Sbjct: 359 FNHEEINQLKLDKII 373
>gi|426246664|ref|XP_004017112.1| PREDICTED: LOW QUALITY PROTEIN: alpha-methylacyl-CoA racemase [Ovis
aries]
Length = 374
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/376 (53%), Positives = 262/376 (69%), Gaps = 14/376 (3%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GITV+E GLAP PFCGM+L +FGA V+R+D+ G + D G + K+
Sbjct: 1 MALRGITVVELGGLAPVPFCGMVLADFGAHVVRVDRPGTR---SDPSGLARG------KR 51
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ G + + L Q+DV+LEPFR GVME+LQLGP++L K NPRLIY RLSG+GQ G +S
Sbjct: 52 SLGGDLXRRLCAQADVLLEPFRPGVMERLQLGPEILQKKNPRLIYGRLSGFGQSGRFSKA 111
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADFGGGGLMC +GI+MALFER++SG+GQV
Sbjct: 112 AGHDINYLALSGVLSRIGRSGENPYAPLNLLADFGGGGLMCTMGIIMALFERTRSGKGQV 171
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S+L +TQ+ LWD+PRG+N+LDGGA FY TY T DG FMAVGALE Q
Sbjct: 172 IDASMVEGTAYLSSFLWKTQEAGLWDQPRGQNVLDGGAPFYTTYRTADGGFMAVGALEPQ 231
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 232 FYELLIKGLGLKSDELPNQMSIKDWPEMKKKFADIFAKKTKAEWCQIFDGTDACVTPVLT 291
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP LS TP T+ +P G HT ++L+ G
Sbjct: 292 FEEVIHHGHNKDRGSFITDTEQRVSPRPAPLLSNTPALPS-TKRDPFVGEHTEQILKELG 350
Query: 357 YSDANIEELIREDVIE 372
+S I +L ++++E
Sbjct: 351 FSQKEIIQLKLDNIVE 366
>gi|156374206|ref|XP_001629699.1| predicted protein [Nematostella vectensis]
gi|156216705|gb|EDO37636.1| predicted protein [Nematostella vectensis]
Length = 382
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/382 (52%), Positives = 267/382 (69%), Gaps = 8/382 (2%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-DTVGYGKKSLCINLKK 60
L G+ VLE AGLAPAPF GMIL +FGA+VIR+DK + + D + GK+S+ ++L K
Sbjct: 4 VLSGVRVLELAGLAPAPFAGMILADFGASVIRVDK--VKTLISLDRLARGKRSVAVDLHK 61
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ +K L +SDV++EPFR GVMEKL LGP L NPRLIYARL+GYGQ GP ++
Sbjct: 62 PRGIETIKRLCAKSDVLIEPFRPGVMEKLGLGPKELMDENPRLIYARLTGYGQTGPLANR 121
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+LS+LG R+ N TPP NL DF GGGLMC +GI++AL ER KSGRGQV
Sbjct: 122 AGHDINYIALTGLLSMLGRRDSNLTPPLNLLGDFAGGGLMCVMGILLALLERGKSGRGQV 181
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID MV+G+AY+GS+ +QD +W RGENLLD GA FYDTY+T DG+++A+GA+E +
Sbjct: 182 IDTAMVDGAAYVGSFAYMSQDLGIWPGKRGENLLDTGAPFYDTYKTSDGKYVAIGAIEPK 241
Query: 241 FYAQLLAGLGMTEEELPQHEVE---TGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
FY QL+ GLG+ E+ Q + T + + F KTQAEWCE+F NTDAC PVL+
Sbjct: 242 FYQQLIKGLGLKEQVSEQMDFTKWVTRKEDFAKIFATKTQAEWCEVFKNTDACFAPVLTP 301
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
+A HPHN+ R +FI N G P PAP+LSRTPG + P G HT +VL +G+
Sbjct: 302 EEAPQHPHNIERRTFI-NNEGTFEPTPAPKLSRTPGNAS-PRQLPKIGEHTVDVLMEYGF 359
Query: 358 SDANIEELIREDVIEETIEMNS 379
+ +++L++E+VI+ + +S
Sbjct: 360 REYEVKDLLKEEVIDTALRQSS 381
>gi|443683207|gb|ELT87540.1| hypothetical protein CAPTEDRAFT_152090 [Capitella teleta]
Length = 381
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/384 (52%), Positives = 270/384 (70%), Gaps = 6/384 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MALKG+ V+E AGLAPAPFCGM+L++FGA V+R+D+ A + D + GK+S+ ++LK+
Sbjct: 1 MALKGVRVVELAGLAPAPFCGMVLSDFGANVVRVDRARAGNAL-DRLARGKQSIAVDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G++V++ L +DV++EPFRKGVME+L LGPD L NPRLIYAR++GYGQ G S+
Sbjct: 60 KEGINVVRKLCCSADVLIEPFRKGVMERLGLGPDQLMSENPRLIYARMTGYGQKGDLSNR 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SG+LS LG + P P NL ADF GGGLMCA+GI+MAL ER +SG+GQ+
Sbjct: 120 AGHDINYLAISGMLSRLGRQGEKPYAPINLLADFAGGGLMCAMGILMALMERHQSGKGQI 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +MVEG+AY+ S++ ++ D +W RGE LDG A +YDTYET DG+FMAVGA+E Q
Sbjct: 180 VDASMVEGAAYVSSFVWQSVDLPMWGAGRGEGWLDGAAPWYDTYETSDGKFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQ--HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
FY QL+ GLG+ E Q ++ R K +KF KTQAEWC IFD DACVTPVLS+
Sbjct: 240 FYTQLIKGLGLEPHEAWQFNNDWPQLREKFAKKFASKTQAEWCAIFDEVDACVTPVLSME 299
Query: 299 QATSHPHNVHRGSFIPN-RAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
+A S+PHN G+F + G+ P PAP LSRTPG ++ +NP G HT E+L GY
Sbjct: 300 EAASYPHNKQLGTFRKKAQTGLTVPRPAPALSRTPGATQ-ELNNPEAGQHTYEILSALGY 358
Query: 358 SDANIEELIREDVIEETIEMNSKL 381
++ L+ +E+ E SKL
Sbjct: 359 KSDEMKRLVEAGAVEQA-ETASKL 381
>gi|74141160|dbj|BAE35893.1| unnamed protein product [Mus musculus]
Length = 381
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/385 (54%), Positives = 280/385 (72%), Gaps = 8/385 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L+G+ V+E AGLAP PFCGM+L +FGA V+R+++ G+ ++ + GK+SL ++LK+
Sbjct: 1 MVLRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTG--ENFLARGKRSLALDLKR 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++G++V++ + ++DV+LEPFR GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +
Sbjct: 59 SQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKV 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP PP NL A FGGGGLMC LGIV+ALFER++SGRGQV
Sbjct: 119 AGHDINYLALSGVLSKIGRSGENPYPPLNLLAGFGGGGLMCTLGIVLALFERTRSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +MVEG+AYL S+L +TQ LW +PRG+N+LDGGA FY TY+T DG FMAVGA+E Q
Sbjct: 179 IDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQ 238
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL GLG+ EELP ++ +K F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 239 FYALLLKGLGLESEELPSQMSSADWPEMKKKFAAVFAKKTKAEWCQIFDGTDACVTPVLT 298
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+A H HN R SFI + + +P PAP LSRTP + +P+ G HT EVLR +G
Sbjct: 299 FEEALHHQHNRERASFITDGEQLPSPRPAPLLSRTPAVPS-AKRDPSVGEHTVEVLREYG 357
Query: 357 YSDANIEELIREDVIEETIEMNSKL 381
+S I +L R D I E+ ++ + L
Sbjct: 358 FSQEEILQL-RSDRIVESDKLKANL 381
>gi|449514249|ref|XP_002191692.2| PREDICTED: alpha-methylacyl-CoA racemase [Taeniopygia guttata]
Length = 396
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/369 (54%), Positives = 259/369 (70%), Gaps = 10/369 (2%)
Query: 12 AGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQDTVGYGKKSLCINLKKAKGLSVMK 68
AGLAPAP CGMI+ +FGA V+R+D+ A D GK+SL ++LK+ +G +V++
Sbjct: 22 AGLAPAPLCGMIIADFGAQVVRVDRPSRSSAALAHGDVQARGKRSLALDLKQPQGAAVLR 81
Query: 69 NLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYL 128
L +DV++EPFR GVME+L LGP+VL + NPRLIYARL+G+GQ G Y+ AGHDINYL
Sbjct: 82 RLCGAADVLIEPFRHGVMERLGLGPEVLLQENPRLIYARLTGFGQTGKYAKSAGHDINYL 141
Query: 129 GLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEG 188
LSG+LS LG +N NP P NL ADF GGG+MCALGIV+ALFER++SGRGQVID +MVEG
Sbjct: 142 ALSGVLSKLGRKNENPYAPVNLLADFAGGGVMCALGIVIALFERARSGRGQVIDASMVEG 201
Query: 189 SAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAG 248
AYL S+L ++Q+ LW +PRGENLLD GA FY+ Y T DG+F+AVGA+E +FY QL+ G
Sbjct: 202 VAYLSSFLWKSQNLGLWSQPRGENLLDSGAPFYEIYRTSDGKFVAVGAIEPKFYNQLIKG 261
Query: 249 LGMTEEELP-----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSH 303
LG+ +ELP H E + K F +KTQAEWC +FD+TDACVTPVLS A SH
Sbjct: 262 LGLNLDELPSQMSFSHWPEM-KKKFASVFAQKTQAEWCSVFDSTDACVTPVLSFEDAASH 320
Query: 304 PHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIE 363
HN R SFI N ++P PAP LSRTP + +P G HT E+L +G++ I+
Sbjct: 321 QHNKERNSFIKNDEEEISPRPAPVLSRTPAVPS-CKRDPFIGEHTEEILLEYGFTKQEID 379
Query: 364 ELIREDVIE 372
+L + IE
Sbjct: 380 KLYSDKAIE 388
>gi|426385002|ref|XP_004059029.1| PREDICTED: LOW QUALITY PROTEIN: alpha-methylacyl-CoA racemase
[Gorilla gorilla gorilla]
Length = 394
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/376 (52%), Positives = 264/376 (70%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MA +GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G G +SL ++ K+
Sbjct: 1 MAPQGISVVEPSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGGRSLVLDPKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L + DV+ EPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGAAVLRRLCERPDVLPEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGLMCALGIVMALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFADGGLMCALGIVMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ P G+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPXGQNMLDGGAPFYMTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GL + +ELP + + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELLIKGLELKSDELPNQMSTDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ H HN RGSFI + V+P PAP L TP + +P G HT E+L FG
Sbjct: 300 FEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSF-KRDPFVGEHTEEILEEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I +L + +IE
Sbjct: 359 FSREEIYQLNSDKIIE 374
>gi|242019436|ref|XP_002430167.1| alpha-methylacyl-CoA racemase, putative [Pediculus humanus
corporis]
gi|212515258|gb|EEB17429.1| alpha-methylacyl-CoA racemase, putative [Pediculus humanus
corporis]
Length = 378
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/381 (56%), Positives = 267/381 (70%), Gaps = 3/381 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLE AGLAP+PFCG IL +FGA+VIRIDK + D + GKKSL +NLK
Sbjct: 1 MPLKGIKVLELAGLAPSPFCGAILADFGASVIRIDKISSSS-TADCLSNGKKSLALNLKD 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ K L++ +DV+LEPFRKGVME L+LGP+ L KSNPRLIYARLSG+GQ G YSS
Sbjct: 60 EEGKNIFKKLSSNADVLLEPFRKGVMESLELGPENLMKSNPRLIYARLSGFGQYGLYSSR 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDIN+L +SG+LS LG N PTPP NL ADFGGGGL+CALGIV+ALFER+KS +GQ+
Sbjct: 120 AGHDINFLSVSGVLSFLGRYNEKPTPPVNLLADFGGGGLLCALGIVLALFERTKSNKGQI 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
IDC+MVEG AYL SWL R+Q +W RG N+LD G+HFYDTYETKDG+F+AVGALE+Q
Sbjct: 180 IDCSMVEGVAYLSSWLFRSQKLPIWGNERGLNILDTGSHFYDTYETKDGKFLAVGALETQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
FY L L + + + +T+ FK K + EWCEIFDN DACVTPVL ++
Sbjct: 240 FYKILTDHLKSNDLSDQWSDFSKKKKIITDIFKTKNRDEWCEIFDNVDACVTPVLDKTEV 299
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDA 360
H HN R SF G + P PAP+LSRTPG +K + G ++ E+L GY+
Sbjct: 300 GDHVHNKERESFTRLTDGTMIPNPAPKLSRTPGVTKAKVSHVENGFNSEEILLELGYNKE 359
Query: 361 NIEELIREDVIEETIEMNSKL 381
I+EL VI+ I +SKL
Sbjct: 360 EIKELDLNGVIK--IITSSKL 378
>gi|291221776|ref|XP_002730894.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Saccoglossus
kowalevskii]
Length = 386
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/379 (53%), Positives = 262/379 (69%), Gaps = 9/379 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-QDTVGYGKKSLCINLK 59
M L + V+EF GLAP PF GMIL ++GA VI+I++ G + + GK+S+ ++LK
Sbjct: 1 MILSDVKVIEFGGLAPGPFAGMILADYGADVIKIERTGNMEVTSRPLLSRGKRSIVLDLK 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
++GL + K L SDV++EPFR GVMEKL LGP VL K NP LIYARL+G+GQ G YS
Sbjct: 61 SSEGLKIAKKLCLASDVLIEPFRPGVMEKLGLGPTVLLKHNPGLIYARLTGFGQSGKYSQ 120
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINYL +SG+LS LG N NP P NL ADF GGGLMC LGIV+ALF RS++G GQ
Sbjct: 121 MAGHDINYLAMSGLLSRLGRYNENPMAPLNLMADFAGGGLMCVLGIVLALFVRSRTGNGQ 180
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTF-LW-DKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
VID NMV+G AY+GSW+ + ++TF +W RG+NLLD GA FY+TY TKD + MAVGA+
Sbjct: 181 VIDANMVDGCAYIGSWIFQGKNTFAIWPSNERGQNLLDTGAPFYETYRTKDNKHMAVGAI 240
Query: 238 ESQFYAQLLAGLGMTEEE-----LPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QFYAQLL GLG+ ++E + ++ + K + F KTQ EWC IFD TDACVT
Sbjct: 241 EPQFYAQLLNGLGLADDEDLPGQMEMYKWPEMKEKFNQIFATKTQDEWCTIFDGTDACVT 300
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PV +L +A H HN R F+ N G P PAP +S+TPG S + + P PG HT+++L
Sbjct: 301 PVPTLEEAVQHSHNRDRKLFLTNEIGEAEPRPAPLMSKTPGVSSV-KPTPLPGQHTQQIL 359
Query: 353 RHFGYSDANIEELIREDVI 371
+ GYS I +LI+++++
Sbjct: 360 SNLGYSKQQISQLIKDEIV 378
>gi|444712585|gb|ELW53506.1| Alpha-methylacyl-CoA racemase [Tupaia chinensis]
Length = 382
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/376 (55%), Positives = 272/376 (72%), Gaps = 6/376 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ V+E AGLAP PFCGMIL +FGA V+R+D+ G+ V + GK+SL ++LK+
Sbjct: 1 MALRGVCVVELAGLAPGPFCGMILADFGAQVLRVDRPGSSGDVS-RLSRGKRSLALDLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G SV++ L ++DV+LEPFR GVMEKLQLGP++L + NP+LIYARLSG+GQ G +S +
Sbjct: 60 PEGASVLRRLCERADVLLEPFRHGVMEKLQLGPEILQQENPKLIYARLSGFGQSGKFSRV 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDIN+L LSG+LS +G NP P NL DFGGGGLMCALGIVMALFER+ SG+GQV
Sbjct: 120 AGHDINFLALSGVLSKIGRSGENPYAPLNLLGDFGGGGLMCALGIVMALFERTHSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ T LW++PRG+N+LDGGA +Y TY T DG+FMAVGA+E Q
Sbjct: 180 IDANMVEGAAYLSSFLWKTQKTGLWEQPRGQNILDGGAPYYTTYRTADGQFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY ++ GLG+ +ELP T + K + F +KT+AEWC+IFD TDACVTPVL+
Sbjct: 240 FYELMIKGLGLKSDELPPQMSMTDWPEMKKKFADIFAKKTKAEWCQIFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L + H H+ RGSF V+P PAP LS TP + +P G HT E+L+ FG
Sbjct: 300 LEEVVHHDHSKERGSFFMGGEQDVSPRPAPVLSDTPAIPS-PKPDPLVGEHTEEILKEFG 358
Query: 357 YSDANIEELIREDVIE 372
+S I++L + +IE
Sbjct: 359 FSQKEIDQLTSDKIIE 374
>gi|328722134|ref|XP_001951098.2| PREDICTED: alpha-methylacyl-CoA racemase-like isoform 1
[Acyrthosiphon pisum]
Length = 378
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/372 (51%), Positives = 252/372 (67%), Gaps = 3/372 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKG+ +LEF+GLAP PF G IL++FGA V I K P + GKKS+ INLK
Sbjct: 1 MPLKGLNILEFSGLAPVPFVGTILSDFGANVTVIQKVSTSPKAISFLNGGKKSISINLKH 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ + + L +D++LEP+R GVMEKL LGPDV+ NPRLIYARL+GYG G Y+
Sbjct: 61 PEGVEITQKLIINADIVLEPYRPGVMEKLGLGPDVMIAKNPRLIYARLNGYGSHGQYAKR 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SG+LSL G +N P PP N ++F GG ++C +GI+MA+ ER KSG+GQV
Sbjct: 121 AGHDINYLAMSGLLSLYGSKNSKPVPPVNF-SEFAGGSMVCVMGILMAVIERYKSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D N+ EG +Y+GSWL +Q++ +W K +G+NLLDGG HFYDTYETKDG++MAVGA+E
Sbjct: 180 VDANITEGISYVGSWLMCSQESMIWGKSKGQNLLDGGMHFYDTYETKDGKWMAVGAIEPA 239
Query: 241 FYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
FY + + GLG+ ++ Q + E R + KFKEKT+ EWC IFD+ DACVTPVL L +
Sbjct: 240 FYQEFIKGLGLNINDIEQMDNFEGNRVIIANKFKEKTREEWCNIFDSKDACVTPVLELDE 299
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSD 359
HPHN R S+I + +V P PAP+LS TPG S + G +TRE+L GY+
Sbjct: 300 VDQHPHNASRNSYI-RKDNIVLPVPAPKLSVTPGVSSSNKPTVVCGQNTREILESIGYTQ 358
Query: 360 ANIEELIREDVI 371
I +L I
Sbjct: 359 IEINKLFENKTI 370
>gi|351708540|gb|EHB11459.1| Alpha-methylacyl-CoA racemase [Heterocephalus glaber]
Length = 382
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 273/378 (72%), Gaps = 6/378 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI V+E AGLAP PFCGM+L +FGA V R+D+ G + + GK+SL ++LK+
Sbjct: 1 MALRGIKVVELAGLAPGPFCGMVLADFGAQVSRVDRPGFSSNLS-RLDRGKRSLVLDLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G V++ L ++DV+LEPFR GVMEKLQLGP++L + NP+LIYARLSG+GQ G +S +
Sbjct: 60 PEGPGVLRRLCARADVLLEPFRSGVMEKLQLGPNLLLQENPKLIYARLSGFGQSGSFSQV 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP PP NL ADFGGGGL+C LGI+MAL ER SG+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLLCTLGILMALVERMHSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S++ +TQ LW KPRG+NLLDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFIWKTQKVGLWSKPRGQNLLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ GLG+ +ELP Q + + K + F +KT+AEWC++FD TDACVTPVL+
Sbjct: 240 FYQLLIKGLGLKSDELPNQMSQADWPEMKKKFADVFVKKTKAEWCQVFDGTDACVTPVLT 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L +A H H+ RGSF+ + +++P PAP LSRTP + +P G HT E+L++FG
Sbjct: 300 LEEAAHHDHSRERGSFLTDEDQLLSPRPAPLLSRTPAVP-FAQRDPFVGEHTEEILKNFG 358
Query: 357 YSDANIEELIREDVIEET 374
++ I+EL + +IE +
Sbjct: 359 FNQKEIDELYSKGIIESS 376
>gi|328722136|ref|XP_001951120.2| PREDICTED: alpha-methylacyl-CoA racemase-like isoform 2
[Acyrthosiphon pisum]
Length = 378
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/372 (51%), Positives = 252/372 (67%), Gaps = 3/372 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKG+ +LEF+GLAP PF G IL++FGA V I K A + GKKS+ INLK
Sbjct: 1 MPLKGLNILEFSGLAPVPFVGTILSDFGANVTVIQKRSAILEFTSFLNGGKKSISINLKH 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ + + L +D++LEP+R GVMEKL LGPDV+ NPRLIYARL+GYG G Y+
Sbjct: 61 PEGVEITQKLIINADIVLEPYRPGVMEKLGLGPDVMIAKNPRLIYARLNGYGSHGQYAKR 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SG+LSL G +N P PP N ++F GG ++C +GI+MA+ ER KSG+GQV
Sbjct: 121 AGHDINYLAMSGLLSLYGSKNSKPVPPVNF-SEFAGGSMVCVMGILMAVIERYKSGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D N+ EG +Y+GSWL +Q++ +W K +G+NLLDGG HFYDTYETKDG++MAVGA+E
Sbjct: 180 VDANITEGISYVGSWLMCSQESMIWGKSKGQNLLDGGMHFYDTYETKDGKWMAVGAIEPA 239
Query: 241 FYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
FY + + GLG+ ++ Q + E R + KFKEKT+ EWC IFD+ DACVTPVL L +
Sbjct: 240 FYQEFIKGLGLNINDIEQMDNFEGNRVIIANKFKEKTREEWCNIFDSKDACVTPVLELDE 299
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSD 359
HPHN R S+I + +V P PAP+LS TPG S + G +TRE+L GY+
Sbjct: 300 VDQHPHNASRNSYI-RKDNIVLPVPAPKLSVTPGVSSSNKPTVVCGQNTREILESIGYTQ 358
Query: 360 ANIEELIREDVI 371
I +L I
Sbjct: 359 IEINKLFENKTI 370
>gi|16198363|gb|AAH15825.1| Amacr protein [Mus musculus]
Length = 360
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/355 (54%), Positives = 258/355 (72%), Gaps = 7/355 (1%)
Query: 22 MILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPF 81
M+L +FGA V+R+++ G+ ++ + GK+SL ++LK+++G++V++ + ++DV+LEPF
Sbjct: 1 MVLADFGAEVVRVNRLGSTG--ENFLARGKRSLALDLKRSQGVTVLRRMCARADVLLEPF 58
Query: 82 RKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRN 141
R GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +AGHDINYL LSG+LS +G
Sbjct: 59 RCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSG 118
Query: 142 RNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQD 201
NP PP NL ADFGGGGLMC LGIV+ALFER++SGRGQVID +MVEG+AYL S+L +TQ
Sbjct: 119 ENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQVIDSSMVEGTAYLSSFLWKTQP 178
Query: 202 TFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEV 261
LW +PRG+N+LDGGA FY TY+T DG FMAVGA+E QFYA LL GLG+ EELP
Sbjct: 179 MGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQFYALLLKGLGLESEELPSQMS 238
Query: 262 ETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRA 317
+ K + F +KT+AEWC+IFD TDACVTPVL+ +A H HN R SFI +
Sbjct: 239 SADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLTFEEALHHQHNRERASFITDGE 298
Query: 318 GVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
+ +P PAP LSRTP + +P+ G HT EVLR +G+S I +L + ++E
Sbjct: 299 QLPSPRPAPLLSRTPAVPS-AKRDPSVGEHTVEVLREYGFSQEEILQLHSDRIVE 352
>gi|2145186|gb|AAB72146.1| alpha-methylacyl-CoA racemase [Mus musculus]
Length = 360
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/355 (54%), Positives = 258/355 (72%), Gaps = 7/355 (1%)
Query: 22 MILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPF 81
M+L +FGA V+R+++ G+ ++ + GK+SL ++LK+++G++V++ + ++DV+LEPF
Sbjct: 1 MVLADFGAEVVRVNRLGSTG--ENFLARGKRSLALDLKRSQGVTVLRRMCARADVLLEPF 58
Query: 82 RKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRN 141
R GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +AGHDINYL LSG+LS +G
Sbjct: 59 RCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSG 118
Query: 142 RNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQD 201
NP PP NL ADFGGGGLMC LGIV+ALFER++SGRGQ+ID +MVEG+AYL S+L +TQ
Sbjct: 119 ENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQIIDSSMVEGTAYLSSFLWKTQP 178
Query: 202 TFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEV 261
LW +PRG+N+LDGGA FY TY+T DG FMAVGA+E QFYA LL GLG+ EELP
Sbjct: 179 MGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQFYALLLKGLGLESEELPSQMS 238
Query: 262 ETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRA 317
+ K + F +KT+AEWC+IFD TDACVTPVL+ +A H HN R SFI +
Sbjct: 239 SADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLTFEEALHHQHNRERASFITDGE 298
Query: 318 GVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
+ +P PAP LSRTP + +P+ G HT EVLR +G+S I +L + ++E
Sbjct: 299 QLPSPRPAPLLSRTPAVPS-AKRDPSVGEHTVEVLREYGFSQEEILQLHSDRIVE 352
>gi|157135186|ref|XP_001656563.1| alpha methylacyl-coa racemase [Aedes aegypti]
gi|108870293|gb|EAT34518.1| AAEL013260-PA [Aedes aegypti]
Length = 380
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/378 (51%), Positives = 252/378 (66%), Gaps = 5/378 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MALKG+ VLEFAGLAP PFCGM+L +FGATV RIDK D + GK++L ++LKK
Sbjct: 1 MALKGLKVLEFAGLAPGPFCGMVLADFGATVTRIDKTPINSL--DVLQSGKRTLALDLKK 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
K + ++++L SDV++EPFR GVMEKL LGP + NPRLIYARL+G+GQ+G +++
Sbjct: 59 PKAVEIVRSLCRTSDVLIEPFRPGVMEKLGLGPTEIMNENPRLIYARLTGFGQNGSHAAR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSGILSL G + PT P NLAADF GGGL+CA GI+ AL ER SG+GQ+
Sbjct: 119 AGHDINYVALSGILSLFGRKGERPTAPINLAADFAGGGLLCAFGILAALLERHHSGKGQI 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MVEG+AY+GSWL R+Q +W KPRGEN+LD GAHFYDT+ETKDG++M+VGALE Q
Sbjct: 179 VDHAMVEGAAYVGSWLIRSQSLPVWGKPRGENILDTGAHFYDTFETKDGKYMSVGALEPQ 238
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
FY +LL GL + + + R L F+ KT+ EW IF N DACV PVL L +
Sbjct: 239 FYKELLQGLDLPNNISQYEDDDKARHLLEAVFRTKTRDEWTGIFSNRDACVFPVLELDEV 298
Query: 301 TSHPHNVHRGSFIP---NRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
HPHN R +F+ + + P PAP+LSRTP S + E+ +
Sbjct: 299 DKHPHNRERNAFLERSQTKENQLVPTPAPKLSRTPAVSGALSADKDELQMVEEICKEIDL 358
Query: 358 SDANIEELIREDVIEETI 375
++ EL RE VI +I
Sbjct: 359 GAKDVVELCREKVILTSI 376
>gi|72042701|ref|XP_794568.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Strongylocentrotus
purpuratus]
Length = 384
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/386 (52%), Positives = 259/386 (67%), Gaps = 7/386 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+E AGLAP P GMIL +FGA VIR+D+ + DT+ GK S+ +NLK
Sbjct: 1 MALAGLKVIEIAGLAPVPHAGMILADFGAQVIRVDRIMQMGVISDTLSRGKLSVALNLKS 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
KG+ K +++ +DV++EPFR G MEK+ LGP VL K NPRLIYARLSG+GQ+GP +
Sbjct: 61 PKGVEAFKRVSSNADVLIEPFRPGTMEKMGLGPSVLMKENPRLIYARLSGFGQEGPLKHI 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ SG+LSLLG PT P NL ADF GGGLMC++GI+++LFER+KSG GQV
Sbjct: 121 AGHDINYIATSGVLSLLGRAGEKPTFPINLLADFAGGGLMCSMGIMLSLFERTKSGLGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMV GSAY+ SWL ++ L+ RG+NLLD GA FY+TY T DG++MAVGALE Q
Sbjct: 181 IDANMVHGSAYVSSWLWMGRNMGLFSDDRGKNLLDTGAPFYETYRTLDGKYMAVGALEPQ 240
Query: 241 FYAQLLAGLGMTEEE-----LPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA+ L GLG++++E + + + + + F KTQAEW IF+ TDAC TPVL
Sbjct: 241 FYAKFLQGLGLSDDEDLPSQMSREDWPSMKQTFASIFATKTQAEWTHIFEKTDACTTPVL 300
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+ +A+ HPHN G F+ N G PAPAP LSRTPG S T PA G T VL
Sbjct: 301 TRDEASEHPHNKSMGHFLRNTKGGHEPAPAPLLSRTPG-SPSTMALPAVGQDTLAVLVEA 359
Query: 356 GYSDANIEELIREDVIEETIEMNSKL 381
GYS ++E+ V E +M+ KL
Sbjct: 360 GYSKKEVKEMCASGV-AEMADMSPKL 384
>gi|60688587|gb|AAH91163.1| Alpha-methylacyl-CoA racemase [Rattus norvegicus]
gi|119850777|gb|AAI27506.1| Alpha-methylacyl-CoA racemase [Rattus norvegicus]
gi|127799267|gb|AAH78885.2| Alpha-methylacyl-CoA racemase [Rattus norvegicus]
Length = 361
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/357 (55%), Positives = 256/357 (71%), Gaps = 10/357 (2%)
Query: 22 MILNEFGATVIRIDKHGA--QPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILE 79
MIL +FGA V+ +D+ G+ P + GK+SL ++LK++ G +V++ + ++DV+LE
Sbjct: 1 MILADFGAEVVLVDRLGSVNHP---SHLARGKRSLALDLKRSPGAAVLRRMCARADVLLE 57
Query: 80 PFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGW 139
PFR GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +AGHDINY+ LSG+LS +G
Sbjct: 58 PFRCGVMEKLQLGPETLQQDNPKLIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGR 117
Query: 140 RNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRT 199
NP PP NL ADFGGGGLMC LGI++ALFER++SG GQVID NMVEG+AYL ++L +T
Sbjct: 118 SGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKT 177
Query: 200 QDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELP-Q 258
Q LW +PRG+NLLDGGA FY TY+T DG FMAVGA+E QFY LL GLG+ EELP Q
Sbjct: 178 QAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQFYTLLLKGLGLESEELPSQ 237
Query: 259 HEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPN 315
+E + K + F KT+AEWC+IFD TDACVTPVL+L +A H HN RGSFI +
Sbjct: 238 MSIEDWPEVKKKFADVFARKTKAEWCQIFDGTDACVTPVLTLEEALHHQHNRERGSFITD 297
Query: 316 RAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
+P PAP+LSRTP + +P+ G HT EVL+ +G+S I +L + +IE
Sbjct: 298 EEQHASPRPAPQLSRTPAVPS-AKRDPSVGEHTVEVLKDYGFSQEEIHQLHSDRIIE 353
>gi|58389442|ref|XP_317033.2| AGAP008414-PA [Anopheles gambiae str. PEST]
gi|55237275|gb|EAA12853.3| AGAP008414-PA [Anopheles gambiae str. PEST]
Length = 380
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/375 (52%), Positives = 259/375 (69%), Gaps = 7/375 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MALKG+ V+EF GLAP PFCGM+L +FGATV RID + D + GK+SL +NLK+
Sbjct: 1 MALKGLKVIEFVGLAPGPFCGMLLADFGATVTRIDMNPRNSL--DVLQGGKRSLALNLKQ 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
K ++V+++L SDV++EPFR GVMEK LGP VL NPRL+YARL+G+GQ G +++
Sbjct: 59 PKAINVVRSLCRSSDVLIEPFRPGVMEKFGLGPTVLLSDNPRLVYARLTGFGQTGTHAAR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY+ LSG+LS+LG + PT P NL ADF GGGLMCA GI+ AL ER SG+GQ+
Sbjct: 119 AGHDLNYVALSGVLSMLGRKENKPTAPINLLADFAGGGLMCAFGILAALVERHHSGKGQI 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MVEG+AY+GSWL R+Q +W K RGEN+LDGGAHFYDTYETKDG+F++VGA+E++
Sbjct: 179 VDHAMVEGAAYVGSWLYRSQSLPVWGKARGENILDGGAHFYDTYETKDGKFVSVGAIENK 238
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTE-KFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
FY LL GLG+ + +LPQ E E R +L E F+ KT+ EW EIF+ DACV PVL+ +
Sbjct: 239 FYRLLLEGLGL-DPDLPQFEEEEQRRQLFETTFRTKTRDEWMEIFNGKDACVFPVLTPDE 297
Query: 300 ATSHPHNVHRGSFIPNR---AGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
++ HN R F+ R + V+ P PAP+LSRTP S T E+L G
Sbjct: 298 VETYKHNRERNVFVDYRQSESDVLVPTPAPKLSRTPARSGATAVERGELEMAEEILGEIG 357
Query: 357 YSDANIEELIREDVI 371
+ +L +D++
Sbjct: 358 IDREELVKLYEDDIL 372
>gi|2145184|gb|AAB72145.1| alpha-methylacyl-CoA racemase [Rattus norvegicus]
Length = 361
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 254/355 (71%), Gaps = 6/355 (1%)
Query: 22 MILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPF 81
MIL +FGA V+ +D+ G+ + GK+SL ++LK++ G +V++ + ++DV+LEPF
Sbjct: 1 MILADFGAEVVLVDRLGSVNH-PSHLARGKRSLALDLKRSPGAAVLRRMCARADVLLEPF 59
Query: 82 RKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRN 141
R GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +AGHDINY+ LSG+LS +G
Sbjct: 60 RCGVMEKLQLGPETLRQDNPKLIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGRSG 119
Query: 142 RNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQD 201
NP PP NL ADFGGGGLMC LGI++ALFER++SG GQVID NMVEG+AYL ++L +TQ
Sbjct: 120 ENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKTQA 179
Query: 202 TFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELP-QHE 260
LW +PRG+NLLDGGA FY TY+T DG FMAVGA+E QFY LL GLG+ EELP Q
Sbjct: 180 MGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQFYTLLLKGLGLESEELPSQMS 239
Query: 261 VETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRA 317
+E + K + F KT+AEWC+IFD TDACVTPVL+L +A H HN RGSFI +
Sbjct: 240 IEDWPEMKKKFADVFARKTKAEWCQIFDGTDACVTPVLTLEEALHHQHNRERGSFITDEE 299
Query: 318 GVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
P PAP+LSRTP + +P+ G HT EVL+ +G+S I +L + +IE
Sbjct: 300 QHACPRPAPQLSRTPAVPS-AKRDPSVGEHTVEVLKDYGFSQEEIHQLHSDRIIE 353
>gi|1552374|emb|CAA69358.1| 2-arylpropionyl-CoA epimerase [Rattus norvegicus]
Length = 361
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/357 (54%), Positives = 256/357 (71%), Gaps = 10/357 (2%)
Query: 22 MILNEFGATVIRIDKHGA--QPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILE 79
MIL +FGA V+ +D+ G+ P + GK+SL ++LK++ G +V++ + +++DV+LE
Sbjct: 1 MILADFGAEVVLVDRLGSVNHP---SHLARGKRSLALDLKRSPGAAVLRRMFSRADVLLE 57
Query: 80 PFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGW 139
P R GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +AGHDINY+ LSG+LS +G
Sbjct: 58 PLRCGVMEKLQLGPETLRQDNPKLIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGR 117
Query: 140 RNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRT 199
NP PP NL ADFGGGGLMC LGI++ALFER++SG GQVID NMVEG+AYL ++L +T
Sbjct: 118 SGENPYPPLNLLADFGGGGLMCTLGILVALFERTRSGLGQVIDANMVEGTAYLSTFLWKT 177
Query: 200 QDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELP-Q 258
Q LW +PRG+NLLDGGA FY TY+T DG FMAVGA+E QFY LL GLG+ EELP Q
Sbjct: 178 QAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQFYTLLLKGLGLESEELPSQ 237
Query: 259 HEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPN 315
+E + K + F KT+AEWC+IFD TDACVTPVL+L +A H HN RGSFI +
Sbjct: 238 MSIEDWPEMKKKFADVFARKTKAEWCQIFDGTDACVTPVLTLEEALHHQHNRERGSFITD 297
Query: 316 RAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
P P+P+LSRTP ++ +P+ G HT EVL+ +G+S I +L + +IE
Sbjct: 298 EEQHAFPRPSPQLSRTPSVPS-SQRDPSVGEHTVEVLKDYGFSQEEIHQLHSDRIIE 353
>gi|170037299|ref|XP_001846496.1| alpha methylacyl-coa racemase [Culex quinquefasciatus]
gi|167880405|gb|EDS43788.1| alpha methylacyl-coa racemase [Culex quinquefasciatus]
Length = 376
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/338 (55%), Positives = 245/338 (72%), Gaps = 6/338 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MALKG+ VLEFAGLAP PFCGM+L +FGA V RIDK D + GK++L ++LKK
Sbjct: 1 MALKGLKVLEFAGLAPGPFCGMLLTDFGACVTRIDKTPHNSI--DVLQGGKRTLALDLKK 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
K + ++++L +SDV++EPFR GVMEKL LGP L + NPRLIYARL+G+GQ+G +++
Sbjct: 59 PKAIEIVRSLCRKSDVLIEPFRPGVMEKLGLGPSELMRENPRLIYARLTGFGQNGAHAAR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSGILSLLG ++ PT P NLAADF GGGL+CA GI+ A+ ER SG+GQV
Sbjct: 119 AGHDINYVALSGILSLLGRKDERPTAPINLAADFAGGGLLCAFGILAAVLERHNSGKGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MVEG+AY+GSWL R+Q +W +PRGEN+LD G HFYDT++TKDG+FM+VGA+E Q
Sbjct: 179 VDHAMVEGAAYVGSWLIRSQKLPIWGRPRGENMLDTGVHFYDTFQTKDGKFMSVGAIEPQ 238
Query: 241 FYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
FY +LL GL + + ELPQ+E VE + F KT+ EW +IF + DACV PVL + +
Sbjct: 239 FYKELLEGLDL-QMELPQYEDVEKSKHLFEAIFLTKTRDEWTKIFQDRDACVFPVLDMDE 297
Query: 300 ATSHPHNVHRGSFIP--NRAGVVAPAPAPRLSRTPGTS 335
A +PHN R F+ + P PAP+LSRTP S
Sbjct: 298 AYKYPHNREREVFLDKVKTNDELVPTPAPKLSRTPAQS 335
>gi|33086678|gb|AAP92651.1| Da1-8 [Rattus norvegicus]
Length = 454
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/448 (46%), Positives = 270/448 (60%), Gaps = 78/448 (17%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ VLE AGLAP PFCGMIL +FGA V+ +D+ G+ + GK+SL ++LK+
Sbjct: 1 MALRGVRVLELAGLAPGPFCGMILADFGAEVVLVDRLGSVNH-PSHLARGKRSLALDLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ G +V++ + ++DV+LEPFR GVMEKLQLGP+ L + NP+LIYARLSG+GQ G +S +
Sbjct: 60 SPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLQQDNPKLIYARLSGFGQSGIFSKV 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSG+LS +G NP PP NL ADFGGGGLMC LGI++ALFER++SG GQV
Sbjct: 120 AGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQV 179
Query: 181 IDCNMV---------------------------------EGSAYLGSWLTRTQD------ 201
ID NM+ EG + W+ T D
Sbjct: 180 IDANMLPFVIDLELPSNDPSKLSIGGGFQPVEQVLKDTKEGRIHGSHWMHETADNSKRYV 239
Query: 202 -------------------------TFLWD--------KPRGENLLDGGAHFYDTYETKD 228
TFLW +PRG+NLLDGGA FY TY+T D
Sbjct: 240 TVSYLDVATYKIYKLDTVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTAD 299
Query: 229 GRFMAVGALESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIF 284
G FMAVGA+E QFY LL GLG+ EELP Q +E + K + F KT+AEWC+IF
Sbjct: 300 GEFMAVGAIEPQFYTLLLKGLGLESEELPSQMSIEDWPEVKKKFADVFARKTKAEWCQIF 359
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP 344
D TDACVTPVL+L +A H HN RGSFI + +P PAP+LSRTP + +P+
Sbjct: 360 DGTDACVTPVLTLEEALHHQHNRERGSFITDEEQHASPRPAPQLSRTPAVPS-AKRDPSV 418
Query: 345 GVHTREVLRHFGYSDANIEELIREDVIE 372
G HT EVL+ +G+S I +L + +IE
Sbjct: 419 GEHTVEVLKDYGFSQEEIHQLHSDRIIE 446
>gi|289740497|gb|ADD18996.1| putative L-carnitine dehydratase/alpha-methylacyl-CoA racemase
[Glossina morsitans morsitans]
Length = 382
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/382 (51%), Positives = 256/382 (67%), Gaps = 9/382 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKG+ VLEF+GLAPAPFCG IL +FGA V ID+ P + + GK+ L INLKK
Sbjct: 1 MPLKGVKVLEFSGLAPAPFCGKILADFGAKVTVIDRVPDNPV--NCMNNGKRVLAINLKK 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ G ++++ LA DV++EPFR GVMEKL LGP++LC+ NPRLIYARL+G+GQ GP S+
Sbjct: 59 SLGQNLVRRLAKTQDVLIEPFRPGVMEKLNLGPELLCRDNPRLIYARLTGFGQSGPLSAR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY +SG+LS+LG N P PP N+ ADF GG LMCALGI +AL ER +SGRGQV
Sbjct: 119 AGHDINYAAISGVLSMLGRENEKPLPPINILADFAGGSLMCALGICLALLERHRSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
+D +MVEG+AY+ SWL ++ LW RG N+LDGG++FYDTY TKDG+FM+VG LE
Sbjct: 179 VDSSMVEGAAYIASWLFMSRSIPLLWQGVRGSNVLDGGSYFYDTYLTKDGKFMSVGCLEP 238
Query: 240 QFYAQLLAGLGMTE-EELPQHEVETGRAK--LTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
QF+ LG+ E + P E E AK +TE F +KTQAEW IF++ DACV PVL
Sbjct: 239 QFFELFKEKLGLLELSQYPDSEEEKQAAKDCVTEAFLQKTQAEWSAIFEDIDACVYPVLD 298
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGT--SKITEHNPAPGVHTREVLRH 354
+HPHNV R SF + P PAPRLSRTPGT +K A +++
Sbjct: 299 WDCVMTHPHNVERQSF-DLADNIPVPHPAPRLSRTPGTLNTKSRSSQEAADDALDVLIQE 357
Query: 355 FGYSDANIEELIREDVIEETIE 376
+ ++ L++ED+I+ ++
Sbjct: 358 LQLDNYELKNLVKEDIIQLPVQ 379
>gi|355691250|gb|EHH26435.1| hypothetical protein EGK_16412, partial [Macaca mulatta]
Length = 345
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/330 (55%), Positives = 236/330 (71%), Gaps = 5/330 (1%)
Query: 47 VGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYA 106
+G GK+SL ++LK+ +G +V++ L +SDV+LEPFR GVMEKLQLGP++L + NPRLIYA
Sbjct: 1 LGRGKRSLALDLKQPRGAAVLRRLCARSDVLLEPFRSGVMEKLQLGPEILQRDNPRLIYA 60
Query: 107 RLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIV 166
RL+G+GQ G +S +AGHDINYL LSG+LS +G NP P NL ADF GGGLMC LGI+
Sbjct: 61 RLTGFGQSGSFSRLAGHDINYLALSGVLSKIGRNGENPYAPLNLLADFAGGGLMCVLGIM 120
Query: 167 MALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYET 226
MALFER++SG+GQVID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T
Sbjct: 121 MALFERTRSGKGQVIDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNILDGGAPFYTTYRT 180
Query: 227 KDGRFMAVGALESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCE 282
DG FMAVGA+E QFY L+ GLG+ +ELP + + K F +KT+AEWC+
Sbjct: 181 ADGEFMAVGAIEPQFYELLIKGLGLKSDELPNQMSMDDWPEMKKKFAAVFAKKTKAEWCQ 240
Query: 283 IFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
IFD TDACVTPVL+L + H H RGSFI N ++P PAP LS TP + +P
Sbjct: 241 IFDGTDACVTPVLTLEEVVHHDHIKERGSFITNEEQSMSPRPAPLLSNTPAIPSF-KRDP 299
Query: 343 APGVHTREVLRHFGYSDANIEELIREDVIE 372
G HT E+L FG+S I++L + +IE
Sbjct: 300 FVGEHTEEILDEFGFSREEIDQLKSDKIIE 329
>gi|125986193|ref|XP_001356860.1| GA21697 [Drosophila pseudoobscura pseudoobscura]
gi|54645186|gb|EAL33926.1| GA21697 [Drosophila pseudoobscura pseudoobscura]
Length = 373
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/336 (56%), Positives = 236/336 (70%), Gaps = 7/336 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLEF GLAP P CG IL +FGATV RIDK D + +GK+++C+N+K
Sbjct: 1 MPLKGIKVLEFVGLAPGPLCGKILTDFGATVTRIDKILDNQL--DVLQHGKRTMCVNMKD 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +++ LA +SDV++EPFR GVMEKL LGP LC NPRLIYARL+G+GQ G ++
Sbjct: 59 PEGQQLVRRLAKKSDVLIEPFRPGVMEKLHLGPAELCGENPRLIYARLTGFGQQGRLAAR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY +SG+LS+LG R+ PT P NL ADF GG +MCALGI +AL ER SGRGQV
Sbjct: 119 AGHDLNYAAISGVLSMLGRRDEKPTAPINLLADFAGGSVMCALGICLALLERHNSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MVEG+AY+ SWL ++D +W K RG+N+LDGGA+FYD YETKDG +M+VGALE Q
Sbjct: 179 VDAAMVEGAAYVASWLFLSRDLHIWGKQRGDNILDGGAYFYDNYETKDGLYMSVGALEPQ 238
Query: 241 FYAQLLAGLGMTEEELPQ---HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
F+ L L + E+LPQ E GR LTE F KTQA+W +IF++ DACV PVL
Sbjct: 239 FFELLRQRLELP-EDLPQFGDEHQERGRRLLTEAFLTKTQAQWSKIFEDIDACVYPVLDY 297
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
++ H HN R SF VAP PAPRLSRTPG
Sbjct: 298 TKVHQHAHNKERQSF-GLLGDAVAPRPAPRLSRTPG 332
>gi|195148560|ref|XP_002015241.1| GL19592 [Drosophila persimilis]
gi|194107194|gb|EDW29237.1| GL19592 [Drosophila persimilis]
Length = 373
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/336 (56%), Positives = 236/336 (70%), Gaps = 7/336 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLEF GLAP P CG IL +FGATV RIDK D + +GK+++C+N+K
Sbjct: 1 MPLKGIKVLEFVGLAPGPLCGKILTDFGATVTRIDKILDNQL--DVLQHGKRTMCVNMKD 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +++ LA +SDV++EPFR GVMEKL LGP LC NPRLIYARL+G+GQ G ++
Sbjct: 59 PEGQQLVRRLAKKSDVLIEPFRPGVMEKLHLGPAELCGENPRLIYARLTGFGQQGRLAAR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY +SG+LS+LG R+ PT P NL ADF GG +MCALGI +AL ER SGRGQV
Sbjct: 119 AGHDLNYAAISGVLSMLGRRHEKPTAPINLLADFAGGSVMCALGICLALLERHNSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MVEG+AY+ SWL ++D +W K RG+N+LDGGA+FYD Y+TKDG +M+VGALE Q
Sbjct: 179 VDAAMVEGAAYVASWLFLSRDLHIWGKQRGDNILDGGAYFYDNYQTKDGLYMSVGALEPQ 238
Query: 241 FYAQLLAGLGMTEEELPQ---HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
F+ L L + E+LPQ E GR LTE F KTQAEW +IF++ DACV PVL
Sbjct: 239 FFELLRQRLELP-EDLPQFGDEHQERGRRLLTEAFLTKTQAEWSKIFEDIDACVYPVLDY 297
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
++ H HN R SF VAP PAPRLSRTPG
Sbjct: 298 TKVHQHAHNKERQSF-GLLGDAVAPRPAPRLSRTPG 332
>gi|195580489|ref|XP_002080068.1| GD21682 [Drosophila simulans]
gi|194192077|gb|EDX05653.1| GD21682 [Drosophila simulans]
Length = 374
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/335 (56%), Positives = 232/335 (69%), Gaps = 5/335 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLEF GLAP PFCG IL +FGATV RIDK P D + GK++LC++LK
Sbjct: 1 MPLKGIKVLEFVGLAPGPFCGKILTDFGATVTRIDKVLENPL--DVLQQGKRTLCLDLKN 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
K V++ LA + DV++EPFR GVMEKL LGP LC +NPRLIYARL+G+GQ G +
Sbjct: 59 PKSQQVVQKLAKKCDVLIEPFRPGVMEKLNLGPTDLCSANPRLIYARLTGFGQHGRLAPR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY LSG+LS+LG RN T P N+ ADF GG LMCALGI +AL ER +SGRGQV
Sbjct: 119 AGHDINYAALSGVLSMLGRRNEKVTAPINILADFAGGSLMCALGICLALLERHRSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +MVEG+AY+ SWL +Q +W + RG+NL+DGG++FYDTYETKDGR+M+VGALE Q
Sbjct: 179 VDASMVEGAAYVASWLFMSQKLDIWGRERGDNLVDGGSYFYDTYETKDGRYMSVGALEPQ 238
Query: 241 FYAQLLAGLGMTEE--ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
F+ L L + E+ + + G+ LTE F KTQAEW +IF++ DACV PVL
Sbjct: 239 FFELLKQRLELPEDVSQFGEEHQARGKKLLTEAFLSKTQAEWSQIFEDIDACVYPVLDYR 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
+ H HN+ R SF P PAP LSRTPG
Sbjct: 299 EVHRHDHNMQRNSFEVTE-DTATPRPAPVLSRTPG 332
>gi|195351919|ref|XP_002042463.1| GM23310 [Drosophila sechellia]
gi|194124332|gb|EDW46375.1| GM23310 [Drosophila sechellia]
Length = 374
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/335 (56%), Positives = 232/335 (69%), Gaps = 5/335 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLEF GLAP PFCG IL +FGATV RIDK P D + GK++LC++LK
Sbjct: 1 MPLKGIRVLEFVGLAPGPFCGKILTDFGATVTRIDKVIENPL--DVLQQGKRTLCLDLKN 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
K V++NLA + DV++EPFR GVMEKL LGP LC +NPRLIYARL+G+GQ G +
Sbjct: 59 PKSQQVVQNLAKKCDVLIEPFRPGVMEKLNLGPTDLCTANPRLIYARLTGFGQHGRLAPR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY LSG+LS+LG RN T P N+ DF GG LMCALGI +AL ER +SGRGQV
Sbjct: 119 AGHDINYAALSGVLSMLGRRNEKVTAPINILGDFAGGSLMCALGICLALLERHRSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +MVEG+AY+ SWL +Q +W + RG+NL+DGG++FYDTYETKDGR+M+VGALE Q
Sbjct: 179 VDASMVEGAAYVASWLFMSQKLDIWGRERGDNLVDGGSYFYDTYETKDGRYMSVGALEPQ 238
Query: 241 FYAQLLAGLGMTEE--ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
F+ L L + E+ + + G+ LTE F KTQAEW +IF++ DACV PVL
Sbjct: 239 FFELLKQRLKLPEDVSQFGEEHQARGKKLLTEAFLSKTQAEWSQIFEDIDACVYPVLDYR 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
+ H HN+ R SF P PAP LSRTPG
Sbjct: 299 EVHRHDHNMQRNSFEVTE-DTATPRPAPVLSRTPG 332
>gi|198413125|ref|XP_002119276.1| PREDICTED: similar to alpha-methylacyl-CoA racemase [Ciona
intestinalis]
Length = 377
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/377 (50%), Positives = 253/377 (67%), Gaps = 8/377 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL GI VLE AGLAP PF GMIL +FGA V+R+D+ DT+ GK+S+C++LK+
Sbjct: 1 MALAGIKVLELAGLAPTPFAGMILADFGAKVVRLDRIVES--TPDTMARGKRSICVDLKQ 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
A G++V++ LA +SDV++EPFR G+MEKL LGP L + NPRL+Y RLSG+GQ+GPY +
Sbjct: 59 ADGVNVVRKLAKKSDVLIEPFRPGIMEKLGLGPARLLEENPRLVYVRLSGFGQNGPYRNK 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ SG+LS+L ++ PT P NL ADF GGGL A G+V ALFER +SG+GQV
Sbjct: 119 AGHDINYIATSGVLSMLRRKDEKPTAPVNLLADFAGGGLTSAFGVVTALFERERSGKGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEGSAY+ S+L + FL P GEN+LD A FYDTY+TKDG+F++VGA+E +
Sbjct: 179 IDANMVEGSAYVSSFLFCNR--FLMPNPPGENILDTAAPFYDTYQTKDGKFVSVGAIEPK 236
Query: 241 FYAQLLAGLGMTEE---ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
FY + + GL + + ++ E + + + T+AE EIF + D CV PVL
Sbjct: 237 FYNRFIEGLKLKLDPGNQMKMDEWPRTKEIIRHAILQHTRAELSEIFSDDDNCVMPVLDY 296
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
+ TS PHN R SF + +G P PAPRLSRTPGT P G HTREVL +G+
Sbjct: 297 DEVTSDPHNNERRSFFTDPSGKHIPIPAPRLSRTPGTPDRGAQ-PMVGAHTREVLTEYGF 355
Query: 358 SDANIEELIREDVIEET 374
S +I L++ + +T
Sbjct: 356 SGQDINHLLKIGAVHDT 372
>gi|350402617|ref|XP_003486545.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Bombus impatiens]
Length = 294
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/292 (61%), Positives = 224/292 (76%), Gaps = 2/292 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLE AGLAP PFCGMIL +FGA+VIR+DK D +G+GK+S+ +NLK
Sbjct: 1 MPLKGINVLELAGLAPGPFCGMILAQFGASVIRVDKTYGSYNAIDCLGHGKRSIALNLKV 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ + L NQSDV+++P+R GVME+++LGP+ L N RLIYARL+G+G +GPY++M
Sbjct: 61 YEGSNIFRKLINQSDVLIDPYRPGVMERMKLGPEELMGINKRLIYARLTGFGHNGPYANM 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LSL G N+ PTPP NL ADF GGGLMCA GI++ALFERSKSG GQV
Sbjct: 121 AGHDINYLALSGLLSLFGRHNQKPTPPVNLVADFAGGGLMCAFGIILALFERSKSGIGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
ID +MV+GSAYLGSW R+Q+ LW PRG+N+LD G HFYDTYETKD ++M VGA+E
Sbjct: 181 IDASMVDGSAYLGSWFFRSQNVPGLWGNPRGKNILDSGTHFYDTYETKDKQYMCVGAIEP 240
Query: 240 QFYAQLLAGLGMTEEELPQHE-VETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
+FY L LG++ E+PQ E E R KL + FK+KTQAEWC IFD TDAC
Sbjct: 241 KFYEIFLEKLGISSHEMPQFENFEESREKLEKIFKQKTQAEWCAIFDGTDAC 292
>gi|24585488|ref|NP_610054.1| CG9319, isoform A [Drosophila melanogaster]
gi|442628636|ref|NP_001260638.1| CG9319, isoform B [Drosophila melanogaster]
gi|7298707|gb|AAF53919.1| CG9319, isoform A [Drosophila melanogaster]
gi|211938627|gb|ACJ13210.1| FI06578p [Drosophila melanogaster]
gi|440214004|gb|AGB93173.1| CG9319, isoform B [Drosophila melanogaster]
Length = 373
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/336 (55%), Positives = 233/336 (69%), Gaps = 7/336 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLEF GLAP PFCG IL +FGATV RIDK P D + GK++LC++LK
Sbjct: 1 MPLKGIRVLEFVGLAPGPFCGKILTDFGATVTRIDKVMENPL--DVLQQGKRTLCLDLKN 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
KG ++ L + DV++EPFR GVMEKL LGP LC +NPRLIYARL+G+GQ G +
Sbjct: 59 PKGQQAVQRLVKKCDVLIEPFRPGVMEKLNLGPTDLCTANPRLIYARLTGFGQHGRLAQR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY LSG+LS+LG R+ T P N+ ADF GG LMCALGI +AL ER +SG+GQV
Sbjct: 119 AGHDINYAALSGVLSMLGRRHEKVTAPINILADFAGGSLMCALGICLALLERHRSGKGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +MVEG+AY+ SWL +++ +W + RG+NL+DGG+ FYDTYETKDGR+M+VGALE Q
Sbjct: 179 VDASMVEGAAYVASWLFMSRNLVIWGRERGDNLVDGGSFFYDTYETKDGRYMSVGALEPQ 238
Query: 241 FYAQLLAGLGMTEEEL---PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
F+ L L + E+ +H+V GR LTE F KTQAEW +IF++ DACV PVL
Sbjct: 239 FFEMLKQRLELPEDVSQFGEEHQVR-GRKLLTEAFLSKTQAEWSQIFEDVDACVYPVLDY 297
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
+ H HN+ R SF P PAP LSRTPG
Sbjct: 298 REVHRHDHNIQRNSFEVTE-DTATPRPAPVLSRTPG 332
>gi|194759975|ref|XP_001962217.1| GF14549 [Drosophila ananassae]
gi|190615914|gb|EDV31438.1| GF14549 [Drosophila ananassae]
Length = 373
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/343 (55%), Positives = 234/343 (68%), Gaps = 5/343 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLEF GLAP P CG ILN+FGATV RIDK P D + GK+++ ++LK
Sbjct: 1 MPLKGIKVLEFVGLAPGPLCGKILNDFGATVTRIDKILDNPL--DVLQQGKRTMSLDLKN 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
KG ++++ LA++ DV++EPFR GVMEKL LGP LC NPRLIYARL+G+GQ G +
Sbjct: 59 PKGQALVRRLASKCDVLIEPFRPGVMEKLNLGPAQLCAENPRLIYARLTGFGQHGRLAPR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY +SG+LS+LG R PT P NL ADF GG +MCALGI +AL ER SGRGQV
Sbjct: 119 AGHDINYAAMSGVLSMLGRRTEKPTAPINLLADFAGGSVMCALGICLALLERHNSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +MVEG+AY+ SWL +++ +W RG N LDGGA+ YDTYETKDG FM+VGALE Q
Sbjct: 179 VDSSMVEGAAYVASWLFMSRNLPVWGHERGSNFLDGGAYCYDTYETKDGLFMSVGALEPQ 238
Query: 241 FYAQLLAGLGMTEE--ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
F+ L L + E+ + ++ E GR LTE F KTQAEW +IF++ DACV PVL
Sbjct: 239 FFEVLRGCLNLPEDLSQFAPNDQERGRRLLTEAFLTKTQAEWSQIFEDLDACVYPVLDYR 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
+ H HN R SF VVAP PAPRLSRTPG N
Sbjct: 299 EVHKHDHNQARDSF-EGIGDVVAPRPAPRLSRTPGKPTQERDN 340
>gi|322801628|gb|EFZ22269.1| hypothetical protein SINV_12583 [Solenopsis invicta]
Length = 499
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/499 (42%), Positives = 275/499 (55%), Gaps = 121/499 (24%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MALKGI VLE AGLAP PFCGMIL +FGA+VIR+DK G Q F +D +G+GK+S+ +NLK
Sbjct: 4 MALKGIKVLELAGLAPGPFCGMILADFGASVIRVDKIGPQTF-EDCLGHGKRSIALNLKS 62
Query: 61 AKGLSVMKNLANQSDVILEPFRK------------------------------------- 83
KG++V K L+NQSDVI++ +R+
Sbjct: 63 EKGINVFKKLSNQSDVIIDTYRRGVMEKLKIGPKELMATNKRLIYARLTGYGQNGSYADM 122
Query: 84 -----------GVMEKLQLGPDVLCKSNPRLI------------YARLSGY--------- 111
GVMEKL++GP L +N RLI YA ++G+
Sbjct: 123 AGHDINYLGLSGVMEKLKIGPKELMATNKRLIYARLTGYGQNGSYADMAGHDINYLGLSV 182
Query: 112 ----------------------------------GQDGPYSSMAGH-----------DIN 126
G G S + H D+
Sbjct: 183 IYTRVTLLKFTCLDFVSCLVPTGCGKACRVLWARGITGTLSRLVAHKSTCILTTLTTDLK 242
Query: 127 YLGL---SGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDC 183
+ L +G+LSL G N P PP NLAADFGGGGLMCA GI++AL+ER+KS GQV+D
Sbjct: 243 VIVLLENAGLLSLFGRYNEKPIPPANLAADFGGGGLMCAFGIILALYERTKSNAGQVVDA 302
Query: 184 NMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYA 243
+MVEGSAYLGSWL R+Q T +W+ PRG+N+LD G+HFYDTYETKD R+M VGALE QFY
Sbjct: 303 SMVEGSAYLGSWLFRSQKTGIWENPRGKNILDTGSHFYDTYETKDKRYMCVGALEPQFYE 362
Query: 244 QLLAGLGMTEEELPQH-EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATS 302
L LG++ +E+ Q+ E R ++TE FK KTQAEWC IFD TDACVTPVLSL AT
Sbjct: 363 IFLEKLGLSSDEVTQYNNFEENRRRITEIFKTKTQAEWCAIFDGTDACVTPVLSLKDATL 422
Query: 303 HPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANI 362
H HN R +F R ++ P P+PRLSRTPG S T NP G T ++L + I
Sbjct: 423 HAHNKQRQTFTTVRDDII-PNPSPRLSRTPGISHGTHKNPQAGEDTIQILTELKFQSDEI 481
Query: 363 EELIREDVIEETIEMNSKL 381
++L+ + + ++ SKL
Sbjct: 482 DDLLSNGIAYQ-VQRTSKL 499
>gi|391329381|ref|XP_003739153.1| PREDICTED: alpha-methylacyl-CoA racemase-like isoform 1
[Metaseiulus occidentalis]
Length = 378
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/377 (48%), Positives = 263/377 (69%), Gaps = 10/377 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ VLE AGLAPAPFCGM+L +FGA+VIR+D+ + D + GK+S+ I+LKK
Sbjct: 1 MALRGVRVLELAGLAPAPFCGMVLADFGASVIRVDRLNTK-HDNDRLSRGKRSIAIDLKK 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G S++K + ++SDV+++PFR V+E + L P+ L +SNP+LI AR++GYGQDGP+S
Sbjct: 60 NEGRSLLKKMVDKSDVLIDPFRPDVLEGMGLAPNDLLRSNPKLIVARITGYGQDGPWSRA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ SG+LS+LG P PP NL ADF GGGL+ A+GI ALFER+ SG+GQ+
Sbjct: 120 AGHDINYVATSGVLSMLGKSESPPFPPVNLLADFAGGGLLTAMGICAALFERTVSGKGQI 179
Query: 181 IDCNMVEGSAYLGSWLTRTQ----DTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
ID +M EG+AY+ ++L RT+ + +W RG N+LDGG HFY TYET DG+F+AVGA
Sbjct: 180 IDTSMSEGAAYVSTFLWRTRSPRMNIPIWFSDRGNNVLDGGTHFYQTYETSDGKFVAVGA 239
Query: 237 LESQFYAQLLAGLGMTEEELPQ-HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
LE QFYA+ + G+G+ + PQ +++ + +++ FK KT+ EW IF +TDACVTPVL
Sbjct: 240 LEPQFYAEFIRGIGLDPDTFPQMQDMDEAKEVVSKIFKTKTREEWASIFKDTDACVTPVL 299
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+ + N R +F + G +AP APRLSRTP ++I P PG H+ E+L
Sbjct: 300 DFEEVHKNEQNEARDAFT-SYDGTLAPRAAPRLSRTP--AQIDPVEPEPGEHSLEILHEI 356
Query: 356 GYSDANIEELIREDVIE 372
G ++ + +L+ +++++
Sbjct: 357 GLAEES-RKLLEDNIVQ 372
>gi|196001455|ref|XP_002110595.1| hypothetical protein TRIADDRAFT_54761 [Trichoplax adhaerens]
gi|190586546|gb|EDV26599.1| hypothetical protein TRIADDRAFT_54761 [Trichoplax adhaerens]
Length = 388
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/391 (48%), Positives = 259/391 (66%), Gaps = 16/391 (4%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MALKGI ++E AGLAPAPFCGM+L +FGA+V+R+D+ G P D + GK+S+ +NLK
Sbjct: 1 MALKGIRIIEMAGLAPAPFCGMLLADFGASVVRVDRTGIDP-NGDCLARGKRSISVNLKT 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G S++K L + +DV+L+PFR G MEKL LGP + NPRLIYARL+GYGQ G ++
Sbjct: 60 KQGASIIKRLCSNADVLLDPFRAGAMEKLGLGPRTMLDLNPRLIYARLTGYGQTGKWNRA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SG+LS LG + PTPP NLAADF GGG+ CA GI++AL ER +G+GQV
Sbjct: 120 AGHDINYLAMSGVLSFLGRYKQKPTPPINLAADFAGGGITCAYGILLALLERHNTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDT-----FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
ID MV+G+AY ++L ++ + LW + RG+N LD GA FYD YET DG+FM+VG
Sbjct: 180 IDSAMVDGAAYASTFLFASKASPIYGRSLWGEERGKNFLDSGAPFYDCYETSDGKFMSVG 239
Query: 236 ALESQFYAQLLAGLGM-TEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACV 291
ALE FY+QLL GL + + + PQ++ + + K T+ F +T+ EWC IF N DACV
Sbjct: 240 ALEPNFYSQLLQGLDLDIDSQPPQNDRKYWPEMKEKFTKIFGSRTRDEWCNIFQNLDACV 299
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP---GVHT 348
PVL ++ + N R F N G P+PAPR+ G S + EH G+HT
Sbjct: 300 APVLEDNEVGNWSINSERKVFFTNSDGKQMPSPAPRMH---GKSNLPEHTKQELVCGLHT 356
Query: 349 REVLRHFGYSDANIEELIREDVIEETIEMNS 379
+E+L G+ IE+L++ DV+ +T +S
Sbjct: 357 KEILLENGFESKEIEDLLQNDVVSQTTVKSS 387
>gi|195485819|ref|XP_002091246.1| GE13545 [Drosophila yakuba]
gi|194177347|gb|EDW90958.1| GE13545 [Drosophila yakuba]
Length = 374
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/335 (55%), Positives = 234/335 (69%), Gaps = 5/335 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLEF GLAP PFCG IL +FGATV RIDK P D + GK++L ++LK
Sbjct: 1 MPLKGIKVLEFVGLAPGPFCGKILTDFGATVTRIDKVIENPL--DVLQQGKRTLSLDLKN 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
KG +++ LA + DV++EPFR GVMEKL LGP LC +NPRLIYARL+G+GQ G +
Sbjct: 59 PKGQQLVRRLAKKCDVLIEPFRPGVMEKLNLGPTDLCTANPRLIYARLTGFGQHGRLAPR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY LSG+LS+LG R+ T P NL ADF GG +MCALGI +AL ER SG+GQV
Sbjct: 119 AGHDINYAALSGVLSMLGRRHEKVTSPINLLADFAGGSVMCALGICLALLERHNSGKGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +MVEG+AY+ SWL +++ +W + RG+NL+DGG++FYDTYETKDGR+M+VGALE Q
Sbjct: 179 VDASMVEGAAYVASWLFMSRNLDIWWRDRGDNLIDGGSYFYDTYETKDGRYMSVGALEPQ 238
Query: 241 FYAQLLAGLGMTEE--ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
F+ L L + E+ + + GR LTE F KTQAEW +IF++ DACV PVL
Sbjct: 239 FFELLKQRLELPEDVCQFGDEHQDRGRKLLTEAFLSKTQAEWSQIFEDVDACVYPVLDFR 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
+ H HN R SF +VAP PAP LSRTPG
Sbjct: 299 EVHRHDHNEERKSF-EVIGEIVAPRPAPLLSRTPG 332
>gi|194878745|ref|XP_001974119.1| GG21551 [Drosophila erecta]
gi|190657306|gb|EDV54519.1| GG21551 [Drosophila erecta]
Length = 374
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 232/335 (69%), Gaps = 5/335 (1%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLEF GLAP PFCG IL +FGATV RIDK D + GK++L ++LK
Sbjct: 1 MPLKGIKVLEFVGLAPGPFCGKILTDFGATVTRIDKVIENHL--DVLQQGKRTLSLDLKN 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
KG V++ L + DV++EPFR GVMEKL LGP LC +NPRLIYARL+G+GQ G +
Sbjct: 59 PKGQQVVRRLVKKCDVLIEPFRPGVMEKLNLGPADLCTANPRLIYARLTGFGQHGRLAPR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY LSG+LS+LG R+ T P NL ADF GG +MCALGI +AL ER SGRGQV
Sbjct: 119 AGHDINYAALSGVLSMLGRRHEKVTAPINLLADFAGGSVMCALGICLALLERHNSGRGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +MVEG+AY+ SWL +++ +W + RG+NL+DGG++FYDTYETKDGR+M+VGALE Q
Sbjct: 179 VDASMVEGAAYVASWLFMSRNLGIWGRDRGDNLIDGGSYFYDTYETKDGRYMSVGALEPQ 238
Query: 241 FYAQLLAGLGMTEE--ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
F+ L L + E+ + + + GR LTE F KTQAEW +IF++ DACV PVL
Sbjct: 239 FFELLKQHLQLPEDVSQFGEAHQDRGRKLLTEAFLSKTQAEWSQIFEDVDACVYPVLDYR 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
+ H HN R SF + AP PAP LSRTPG
Sbjct: 299 EVHRHDHNKERKSF-ELAEDIAAPRPAPLLSRTPG 332
>gi|195030122|ref|XP_001987917.1| GH10846 [Drosophila grimshawi]
gi|193903917|gb|EDW02784.1| GH10846 [Drosophila grimshawi]
Length = 373
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/342 (54%), Positives = 238/342 (69%), Gaps = 20/342 (5%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCIN 57
M L+GI VLEF GLAP P CG IL +FGA+V RIDK V D++ GK++L IN
Sbjct: 1 MPLRGIKVLEFVGLAPGPLCGKILADFGASVTRIDK------VVDSIDMLHQGKRTLVIN 54
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LKK G +++ LAN+SDV++EPFR GVMEKL LGP+VLC SNPRLIYARL+G+GQ GP
Sbjct: 55 LKKDGGQRLVQQLANKSDVLIEPFRPGVMEKLNLGPEVLCTSNPRLIYARLTGFGQQGPL 114
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
++ AGHD+NY +SG+LS+LG + PT P N+ ADF GG +MCALGI +AL ER KSGR
Sbjct: 115 AARAGHDLNYAAVSGVLSMLGREHEKPTAPINILADFAGGSVMCALGICVALLERYKSGR 174
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQVID +MVEG+AY+ SWL +++ +W++ RG NL+DGGA+FYDTY TKDG +M+V AL
Sbjct: 175 GQVIDASMVEGAAYVASWLFMSRNLGIWEQKRGRNLIDGGAYFYDTYRTKDGLYMSVAAL 234
Query: 238 ESQFYA------QLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
E QF+ QL L +E H G+ LT+ F K Q EW +F++ DACV
Sbjct: 235 EPQFFEILKERLQLPPDLSQFGDEHQMH----GKQLLTDIFLTKNQDEWSALFEDVDACV 290
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
PV+ S+A H HN R SF+ + A AP PAPRLSRTPG
Sbjct: 291 YPVVDWSKAQQHRHNAERESFV-SVADAWAPCPAPRLSRTPG 331
>gi|195434022|ref|XP_002065002.1| GK15230 [Drosophila willistoni]
gi|194161087|gb|EDW75988.1| GK15230 [Drosophila willistoni]
Length = 377
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/345 (52%), Positives = 239/345 (69%), Gaps = 7/345 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M LKGI VLEF GLAP P CG IL++FGATV RID+ D + +GK+S+C++LK+
Sbjct: 1 MPLKGIKVLEFVGLAPGPLCGKILSDFGATVTRIDRVVENSL--DVLQHGKRSMCVDLKE 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
KG +++ LA +SDV++EPFR GVMEKL LGP LC +NPRLIYARL+G+GQ G ++
Sbjct: 59 PKGQQLVQKLAQKSDVLIEPFRPGVMEKLNLGPAQLCSANPRLIYARLTGFGQTGRLAAR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY+ LSG+LS+LG ++ PT P NL ADF GG ++CALGI +AL ER +SG+GQ+
Sbjct: 119 AGHDLNYVALSGVLSMLGRKHEKPTAPINLLADFAGGSVICALGICLALLERYRSGQGQI 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLW--DKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
+D +MVEG+AY+ SWL ++D +W RG N+LDGGA+FYDTYETKDG +M+V ALE
Sbjct: 179 VDSSMVEGAAYVASWLFMSRDLGIWTPQSDRGANMLDGGAYFYDTYETKDGLYMSVAALE 238
Query: 239 SQFYAQLLAGLGMTEE--ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
QF+ + L + ++ + + + GR LTE F KTQAEW EIF++ DACV PV+
Sbjct: 239 PQFFEIIRQKLNLPDDLSQFGEEHQQIGRELLTESFLSKTQAEWSEIFEDLDACVYPVID 298
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
QA H HN+ R F P PAP LSRTPG + + N
Sbjct: 299 WRQAHQHDHNIERNMF-EQVGKKWLPRPAPSLSRTPGKAFPKQDN 342
>gi|340383937|ref|XP_003390472.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Amphimedon
queenslandica]
Length = 380
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 189/386 (48%), Positives = 253/386 (65%), Gaps = 11/386 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI V+E AGLAP PF G++L +FGA+VIR+DK + + +G K+S+CI++K
Sbjct: 1 MALRGIKVIEMAGLAPVPFAGLLLADFGASVIRVDKPNELVPI-NLMGRKKRSICIDVKN 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G+ V+K L +D++L+ +R G+MEK +GPD+LC NPRLIYARL+G+GQ GP SS
Sbjct: 60 PNGVGVVKKLCRSADILLDSYRPGIMEKFGMGPDILCSINPRLIYARLTGFGQKGPLSSR 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SGILS LG N NP PP NL ADF GG LMC LGI+MAL ER KSG GQV
Sbjct: 120 AGHDINYLAISGILSALGKANDNPFPPINLLADFAGGSLMCLLGILMALMEREKSGFGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +M +G AYL ++LT + L PRG +LDGGA FY TYET DG FMAVGA+E Q
Sbjct: 180 VDASMTQGVAYLSTFLTDVKRIHL---PRGYGMLDGGAPFYTTYETSDGEFMAVGAIEPQ 236
Query: 241 FYAQLLAGLGMTE----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY LL LG+ E++ + E+ + + F KT+ +W +IF + DACV PVLS
Sbjct: 237 FYRALLDKLGLDNSLLAEQMDMTKWESTKEMIARVFLTKTREDWTKIFSDIDACVEPVLS 296
Query: 297 LSQATSHPHNVHRGSF-IPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+ +A HPHN H +F + P PAP LSRTP + + P G +T E+L
Sbjct: 297 MKEAPQHPHNRHTKTFSLDPEIQEFVPNPAPVLSRTPASIGSFDQ-PDIGQNTMEILNEL 355
Query: 356 GYSDANIEELIREDVIEETIEMNSKL 381
Y++ I +LI + +++ E+ SK+
Sbjct: 356 QYTEEEISKLIIDGAVKQN-EIKSKI 380
>gi|391329383|ref|XP_003739154.1| PREDICTED: alpha-methylacyl-CoA racemase-like isoform 2
[Metaseiulus occidentalis]
Length = 382
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 181/381 (47%), Positives = 262/381 (68%), Gaps = 14/381 (3%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ VLE AGLAPAPFCGM+L +FGA+VIR+D+ + D + GK+S+ I+LKK
Sbjct: 1 MALRGVRVLELAGLAPAPFCGMVLADFGASVIRVDRLNTK-HDNDRLSRGKRSIAIDLKK 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G S++K + ++SDV+++PFR V+E + L P+ L +SNP+LI AR++GYGQDGP+S
Sbjct: 60 NEGRSLLKKMVDKSDVLIDPFRPDVLEGMGLAPNDLLRSNPKLIVARITGYGQDGPWSRA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ SG+LS+LG P PP NL ADF GGGL+ A+GI ALFER+ SG+GQ+
Sbjct: 120 AGHDINYVATSGVLSMLGKSESPPFPPVNLLADFAGGGLLTAMGICAALFERTVSGKGQI 179
Query: 181 IDCNMV----EGSAYLGSWLTRTQ----DTFLWDKPRGENLLDGGAHFYDTYETKDGRFM 232
ID +MV +AY+ ++L RT+ + +W RG N+LDGG HFY TYET DG+F+
Sbjct: 180 IDTSMVNERKRRAAYVSTFLWRTRSPRMNIPIWFSDRGNNVLDGGTHFYQTYETSDGKFV 239
Query: 233 AVGALESQFYAQLLAGLGMTEEELPQ-HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
AVGALE QFYA+ + G+G+ + PQ +++ + +++ FK KT+ EW IF +TDACV
Sbjct: 240 AVGALEPQFYAEFIRGIGLDPDTFPQMQDMDEAKEVVSKIFKTKTREEWASIFKDTDACV 299
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
TPVL + + N R +F + G +AP APRLSRTP ++I P PG H+ E+
Sbjct: 300 TPVLDFEEVHKNEQNEARDAFT-SYDGTLAPRAAPRLSRTP--AQIDPVEPEPGEHSLEI 356
Query: 352 LRHFGYSDANIEELIREDVIE 372
L G ++ + +L+ +++++
Sbjct: 357 LHEIGLAEES-RKLLEDNIVQ 376
>gi|355749851|gb|EHH54189.1| hypothetical protein EGM_14972, partial [Macaca fascicularis]
Length = 328
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/312 (56%), Positives = 222/312 (71%), Gaps = 5/312 (1%)
Query: 65 SVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHD 124
+V++ L +SDV+LEPFR GVMEKLQLGP++L + NP+LIYARL+G+GQ G +S +AGHD
Sbjct: 2 AVLRRLCARSDVLLEPFRSGVMEKLQLGPEILQRDNPKLIYARLTGFGQSGSFSRLAGHD 61
Query: 125 INYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCN 184
INYL LSG+LS +G NP P NL ADF GGGLMC LGI+MALFER++SG+GQVID N
Sbjct: 62 INYLALSGVLSKIGRNGENPYAPLNLLADFAGGGLMCVLGIMMALFERTRSGKGQVIDAN 121
Query: 185 MVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQ 244
MVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E QFY
Sbjct: 122 MVEGTAYLSSFLWKTQKSSLWEAPRGQNILDGGAPFYTTYRTADGEFMAVGAIEPQFYEL 181
Query: 245 LLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
L+ GLG+ +ELP + + K F +KT+AEWC+IFD TDACVTPVL+L +
Sbjct: 182 LIKGLGLKSDELPNQMSMDDWPEMKKKFAAVFAKKTKAEWCQIFDGTDACVTPVLTLEEV 241
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDA 360
H H RGSFI N ++P PAP LS TP + +P G HT E+L FG+S
Sbjct: 242 VHHDHIKERGSFITNEEQSMSPRPAPLLSNTPAIPSF-KRDPFVGEHTEEILDEFGFSRE 300
Query: 361 NIEELIREDVIE 372
I++L + +IE
Sbjct: 301 EIDQLKSDKIIE 312
>gi|320162801|gb|EFW39700.1| alpha-methylacyl-CoA racemase [Capsaspora owczarzaki ATCC 30864]
Length = 384
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/381 (49%), Positives = 253/381 (66%), Gaps = 10/381 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ V+E AGLAPAPF G++L +FGA VIR+DK F D + GK+S+ I+LK
Sbjct: 1 MALRGLKVIEMAGLAPAPFAGLVLADFGANVIRVDKLA--DFSVDRLSRGKQSVSIDLKS 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +++L +DV++EPFR GVME+L LGPD L K+NPRLIYARL+GYGQ G +
Sbjct: 59 PRGAQAVRDLCKNADVLIEPFRPGVMERLGLGPDDLLKTNPRLIYARLTGYGQTGKLAQR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ +SG+LS LG R+ NP P NL DF GG LMC +GI+ AL ER++SG+GQV
Sbjct: 119 AGHDINYVAVSGVLSALGRRHENPAFPGNLVGDFAGGSLMCVIGILTALQERARSGKGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID MV+G++YL S++ ++T +WD PRG NLLDGGA FY+TY+TKDG++MAVG++E Q
Sbjct: 179 IDAAMVDGASYLASFVYGVRETGMWDGPRGTNLLDGGAPFYETYKTKDGKYMAVGSIEPQ 238
Query: 241 FY-AQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPVL 295
FY L + LP+ + G +L E+F + K+QAEWC IFD+TDACVTPV
Sbjct: 239 FYRLLLQGLGLDGDSTLPEQLDKEGWPQLKERFTQIFASKSQAEWCAIFDHTDACVTPVN 298
Query: 296 SLSQ--ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
L ++ H RG + GV+ P PAPRLSR P G HT + L
Sbjct: 299 ELDDPLTDANSHGASRGILYRSEEGVM-PVPAPRLSREGALDVQNLTMPRVGQHTVQALT 357
Query: 354 HFGYSDANIEELIREDVIEET 374
G S A++ +L+++ +I +
Sbjct: 358 EAGISPADVAKLLKDGIINDA 378
>gi|225709262|gb|ACO10477.1| Alpha-methylacyl-CoA racemase [Caligus rogercresseyi]
Length = 381
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 249/382 (65%), Gaps = 12/382 (3%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G+ V+E AGLA APF MIL ++GA+VIRID D GKKSL ++LK
Sbjct: 1 MALRGVCVIELAGLAAAPFTSMILADYGASVIRIDNRPGSVVYPDYSCRGKKSLSLDLKH 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ-DGPYSS 119
KG V+K LA +SDV+LE FR GVMEKLQLGP+ L K NP LIYARLSGYGQ + P S
Sbjct: 61 PKGRHVLKQLACKSDVLLESFRPGVMEKLQLGPEFLIKENPGLIYARLSGYGQKESPMSQ 120
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK--SGR 177
AGHDINY+ LSG LS G + NP P N+ DF GGGL CA GI+ ALFER+ GR
Sbjct: 121 RAGHDINYISLSGALSKFGRAHDNPIAPVNIVGDFAGGGLTCAFGILAALFERANDAQGR 180
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQD-TFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVG 235
GQ+IDC M +G++YL SWL +T+D + LW KPRG N+LD GAHFY+ YETK+ G+++AVG
Sbjct: 181 GQIIDCGMTQGASYLSSWLYQTKDSSVLWGKPRGHNMLDTGAHFYEVYETKEPGKYVAVG 240
Query: 236 ALESQFYAQLLAGLGMT-EEELPQHEVETGRAK--LTEKFKEKTQAEWCEIFDNTDACVT 292
A+E QFY+ LL L ++ E+ PQ + T + K KF+ KT+ EW ++F + DACVT
Sbjct: 241 AIEPQFYSILLEKLELSPPEDYPQFDANTEKLKGIFASKFRTKTREEWTKVFKDVDACVT 300
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL + +A H + + F +G PAP LSRTP A G HTR L
Sbjct: 301 PVLDVDEAPF--HELSKEYFTSTESGQRMSLPAPSLSRTPANVSKGGFLKA-GQHTRSTL 357
Query: 353 R-HFGYSDANIEELIREDVIEE 373
R G + +I+EL+RE V+ E
Sbjct: 358 RTSIGMKEEDIDELLREGVVFE 379
>gi|357622886|gb|EHJ74246.1| hypothetical protein KGM_01640 [Danaus plexippus]
Length = 377
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 177/371 (47%), Positives = 238/371 (64%), Gaps = 2/371 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL GI V+E GLAP PFCG +L +FGATV + K + D + GKK++ +NLK
Sbjct: 1 MALNGIKVVEMLGLAPGPFCGTVLADFGATVTVVQK--IEVTTLDVLSNGKKAISLNLKC 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G V K L SDV+++ +R GV+EKL LGP L K NP+LIYARL+GYGQ G Y
Sbjct: 59 PRGKQVFKKLMESSDVLIDTYRPGVLEKLGLGPQDLMKKNPKLIYARLTGYGQTGFYKDK 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY+ +SG+LS+LG + P P N+ AD GG L C LGI++ALFERS SG+GQ+
Sbjct: 119 AGHDLNYVAMSGVLSMLGKDGQPPRAPINILADLAGGSLSCVLGIILALFERSNSGKGQI 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID +M EG+AY+ +W+ ++++ +W G ++LDGG Y TY+TKD +F+AV ALE +
Sbjct: 179 IDASMTEGAAYVANWIFKSKNLPIWMGEPGTSILDGGYPSYQTYKTKDNKFIAVAALEEK 238
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
F+ L GL ++EE+ E K E F KTQ EWC IF DACVTPVL L
Sbjct: 239 FHLMFLKGLNISEEDYAVWEKNECEKKFKEIFLTKTQQEWCNIFKELDACVTPVLDLENV 298
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDA 360
+H ++ R SF + +VAP PAPRLSRTPG++ + PG HT E+L GY +
Sbjct: 299 KNHDLHLSRKSFYVDENNLVAPEPAPRLSRTPGSASGKLPSVKPGQHTIEILTSLGYKKS 358
Query: 361 NIEELIREDVI 371
I+ELI + +
Sbjct: 359 EIQELINNNSV 369
>gi|195387002|ref|XP_002052193.1| GJ17422 [Drosophila virilis]
gi|194148650|gb|EDW64348.1| GJ17422 [Drosophila virilis]
Length = 375
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/338 (53%), Positives = 233/338 (68%), Gaps = 9/338 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L+G+ VLEF GLAP P CG IL +FGA+V RIDK P D + +GK++L ++LKK
Sbjct: 1 MPLRGVKVLEFVGLAPGPLCGKILADFGASVTRIDKVLDNPL--DVLYHGKRTLAVDLKK 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
A G +++ LA + DVI+EPFR GVMEKL LGP LC NPRLIYARL+G+GQ G ++
Sbjct: 59 AAGQRLVQQLAKKYDVIVEPFRPGVMEKLNLGPGQLCTDNPRLIYARLTGFGQKGRLAAR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY +SG+LS+LG + PT P NL ADF GG +MCALGI +AL ER +SG GQV
Sbjct: 119 AGHDLNYAAVSGVLSMLGREHEKPTAPINLLADFAGGSVMCALGICVALLERHRSGLGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLW--DKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
+D MV+G+AY+ SWL ++ +W ++ RG NLLDGGA+FYDTY+TKDG FM+V ALE
Sbjct: 179 VDAAMVDGAAYVASWLFMSRGLSIWNQNQQRGANLLDGGAYFYDTYKTKDGLFMSVAALE 238
Query: 239 SQFYAQLLAGLGMTEEELPQHEVE---TGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+ +LL +EL Q+ E GR LT+ F K+QAEW IF++ DACV PV+
Sbjct: 239 PQFF-ELLKDRLQLPQELSQYGEEHQILGRQLLTDTFLTKSQAEWSAIFEDVDACVYPVV 297
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
+ H HN R SF ++AP PAPRLSRTPG
Sbjct: 298 DWQKVQEHGHNAERQSF-ERVDDILAPRPAPRLSRTPG 334
>gi|195119111|ref|XP_002004075.1| GI19587 [Drosophila mojavensis]
gi|193914650|gb|EDW13517.1| GI19587 [Drosophila mojavensis]
Length = 375
Score = 356 bits (914), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 182/346 (52%), Positives = 234/346 (67%), Gaps = 11/346 (3%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L G+ VLEF GLAP P CG IL +FGA+V RIDK D + +GK+++ ++LKK
Sbjct: 1 MPLGGVKVLEFVGLAPGPLCGKILADFGASVTRIDKVLDNSL--DVLYHGKRTVVVDLKK 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G +++ LA + DVI+EPFR GVMEKL LGPD+LC +NPRLIYARL+G+GQ G +
Sbjct: 59 TAGQQIVQQLARKYDVIVEPFRPGVMEKLNLGPDLLCSANPRLIYARLTGFGQHGRLAPR 118
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY +SG+LS+LG + PT P NL ADF GG +MCALGI +AL ER KSG+GQV
Sbjct: 119 AGHDLNYAAVSGVLSMLGREHEKPTAPINLLADFAGGSVMCALGICLALLERHKSGKGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKP--RGENLLDGGAHFYDTYETKDGRFMAVGALE 238
+D M +G+AY+ SWL ++ +W + RG NLLDGG +FYDTYETKDG FM+V ALE
Sbjct: 179 VDAAMADGAAYVASWLFMSRKLNIWGQAQQRGTNLLDGGVYFYDTYETKDGLFMSVAALE 238
Query: 239 SQFYAQLLAGLGMTEEELPQ----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF++ + L + +EL Q H+V GR LT+ F KTQAEW EIF++ DACV PV
Sbjct: 239 PQFFSLIKERLNLP-QELSQYGEEHQVR-GRQLLTDIFLTKTQAEWSEIFEDIDACVYPV 296
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEH 340
+ + +H HN R SF AP PAPRL RTPG + + H
Sbjct: 297 VDWQKVQNHDHNAARQSF-ERVDDNWAPRPAPRLCRTPGKLRSSTH 341
>gi|291240573|ref|XP_002740193.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Saccoglossus
kowalevskii]
Length = 404
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/385 (47%), Positives = 250/385 (64%), Gaps = 26/385 (6%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M+L GI VLE AGLAPAP GM+L++FGA VIR+D+ Q D + GK+S+ +++K
Sbjct: 1 MSLAGIRVLEMAGLAPAPMAGMMLSDFGAKVIRVDRT-KQLMTVDRLARGKQSIAVDMKS 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
A GL ++K L+ +SDV+++ +R GVMEK+ LGP L N
Sbjct: 60 ADGLDIVKRLSMKSDVLIDSYRPGVMEKMGLGPKPLMTDN-----------------KXX 102
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
++ +G LS + PTPP N+ ADF GGGL+C +GI+MAL +R ++GRGQV
Sbjct: 103 XXXXXXHVSYTGALSTMKRFGGKPTPPINVLADFAGGGLLCTMGILMALIQRQQTGRGQV 162
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFL-W-DKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
+D +M EG+AY+ SWL R+ D L W K G NLLD GA FYDTYETKDG++MAVG++E
Sbjct: 163 VDASMTEGAAYVSSWLWRSHDLQLAWPTKIPGRNLLDTGAPFYDTYETKDGKYMAVGSIE 222
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTP 293
QFYA LL GLG+TE+++P +++ + KLTE F EKTQ+EWC++FD TDACVTP
Sbjct: 223 PQFYALLLKGLGLTEDQMPGTQLDIKKWPAMKDKLTEVFSEKTQSEWCQVFDGTDACVTP 282
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLSL +AT +PHN R +F+P+ +G + P PAP LS TP + + +P G HT EVLR
Sbjct: 283 VLSLDEATQNPHNTAREAFVPSHSGKLEPRPAPLLSDTPAVHQ-SMPDPVIGQHTEEVLR 341
Query: 354 HFGYSDANIEELIREDVIEETIEMN 378
+++ I+ I +DV+EE I N
Sbjct: 342 DADFTENEIKRFIEKDVVEEVIFNN 366
>gi|312374337|gb|EFR21911.1| hypothetical protein AND_16048 [Anopheles darlingi]
Length = 354
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 171/332 (51%), Positives = 232/332 (69%), Gaps = 6/332 (1%)
Query: 45 DTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLI 104
D + GK+SL ++LKK K + V+++L +SDV++EPFR GVMEKL LGP +L + NP LI
Sbjct: 16 DVLQGGKRSLALDLKKPKAIEVVRSLCRKSDVLIEPFRPGVMEKLGLGPSILLQDNPGLI 75
Query: 105 YARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALG 164
YARL+G+GQ G +++ AGHDINY+ LSG+LSLLG + P P NL ADF GGG+MCA G
Sbjct: 76 YARLTGFGQSGSHAARAGHDINYVALSGVLSLLGRQGNKPPFPINLLADFAGGGMMCAFG 135
Query: 165 IVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTY 224
I+ AL ER +SGRGQ++D MVEG+AY+GSWL R+++ +W KPRGEN++DGGAHFYDTY
Sbjct: 136 ILAALLERHRSGRGQIVDNAMVEGAAYIGSWLFRSRNLPIWGKPRGENMIDGGAHFYDTY 195
Query: 225 ETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK-FKEKTQAEWCEI 283
ET+DG+F++VGA+E++FY QLL GLG+ + ELPQ E + R KL EK F+ KT+ +W I
Sbjct: 196 ETRDGKFVSVGAIENRFYRQLLEGLGL-DPELPQFEDDEERKKLFEKLFRSKTRDQWMAI 254
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFI----PNRAGVVAPAPAPRLSRTPGTSKITE 339
F+ TDACV PVL + + S+ HN R F+ + V P PAP+LSRTP TS
Sbjct: 255 FETTDACVFPVLEMDEVESYTHNRERQVFVDRNQTDDDSTVVPTPAPKLSRTPATSGALT 314
Query: 340 HNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
+ T E+L G + + L + ++
Sbjct: 315 KSRDELEMTVEILGEIGIDRSEVVRLHEQGIV 346
>gi|301061873|ref|ZP_07202603.1| CoA-transferase family III protein [delta proteobacterium NaphS2]
gi|300443977|gb|EFK08012.1| CoA-transferase family III protein [delta proteobacterium NaphS2]
Length = 380
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/381 (46%), Positives = 247/381 (64%), Gaps = 15/381 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA----QPFVQDTVGY--GKKSLCI 56
L GI V+E AGLAP+P+CGMIL++FGA V +D+ P++ + GK+S+ +
Sbjct: 4 LDGIKVIEMAGLAPSPYCGMILSDFGANVTIVDRLRKGVPEPPYIMKKSPFDRGKRSMRV 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
NLK +G+ ++ + + +DV++EP+R GVME L GPD NP+LIYARL+G+GQ G
Sbjct: 64 NLKTKRGIEILNRMIDDADVLVEPYRPGVMESLGFGPDTALGRNPKLIYARLTGWGQTGS 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++SMAGHDINY+ LSG LSL + P PP NL DF GGG++CA+GI++ALFER++S
Sbjct: 124 FASMAGHDINYIALSGALSLFRRKGERPLPPTNLLGDFAGGGMLCAMGILLALFERTRSA 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQVID M++G+A L L G N LDGGA FY YET DG +M+VGA
Sbjct: 184 KGQVIDAAMLDGAANLSVMFHGLLAHNLMTLDIGTNPLDGGAPFYQAYETADGGYMSVGA 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGR-AKLTEK----FKEKTQAEWCEIFDNTDACV 291
+E +FYA+LL GL + LP H+ +T + ++ E+ FK KT+ +W +F+ DACV
Sbjct: 244 IEQRFYAELLEGLELDATTLP-HQYDTAKWPEMIERFNIVFKTKTRDQWTAVFEGKDACV 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
+PVL+L + +H HN R I + GV PAPAPRLSRTPG K E G +T+E+
Sbjct: 303 SPVLNLDEVNTHAHNRER-ELIIDVNGVSQPAPAPRLSRTPG--KAQEAKGTRGANTKEI 359
Query: 352 LRHFGYSDANIEELIREDVIE 372
L GYSD+ IE ++DVIE
Sbjct: 360 LSELGYSDSQIEAFTKDDVIE 380
>gi|432105536|gb|ELK31733.1| Alpha-methylacyl-CoA racemase [Myotis davidii]
Length = 298
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/291 (59%), Positives = 207/291 (71%), Gaps = 5/291 (1%)
Query: 86 MEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPT 145
MEKLQLGP++L K NPRLIYARLSG+GQ G ++ AGHDINYL LSG+LS LG NP+
Sbjct: 1 MEKLQLGPEILQKENPRLIYARLSGFGQSGRFAMAAGHDINYLALSGVLSRLGSSGENPS 60
Query: 146 PPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLW 205
P NL ADF GGGLMCALGIVMALFER++SGRGQVID +MVEG+AYL S+L +T++ LW
Sbjct: 61 APLNLLADFAGGGLMCALGIVMALFERTRSGRGQVIDASMVEGTAYLSSFLWKTKNLGLW 120
Query: 206 DKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQH----EV 261
++PRGENLLDGGA FY TY T DG FMAVGALE QFY L+ GLG+ +ELP +
Sbjct: 121 EQPRGENLLDGGAPFYTTYRTADGEFMAVGALEPQFYQLLVKGLGLKSDELPNQMSMADW 180
Query: 262 ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVA 321
+ K F KT+AEWC +FD TDACVTPVL+ + H HN RGSFI + V+
Sbjct: 181 PEMKKKFAAVFATKTKAEWCRVFDGTDACVTPVLTFEEVAHHAHNKERGSFITDGEKGVS 240
Query: 322 PAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
P PAP LS TP T + E +P G HT E+L+ FG+S I +L + VIE
Sbjct: 241 PRPAPLLSNTPATPCL-ERDPLIGEHTEEILKEFGFSQEEINQLYSDKVIE 290
>gi|384493117|gb|EIE83608.1| hypothetical protein RO3G_08313 [Rhizopus delemar RA 99-880]
Length = 369
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/373 (48%), Positives = 239/373 (64%), Gaps = 30/373 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
LKG+ VLE AGLAPAPF GMIL +FGA VIRID+ + D + K+S+ +NLK +K
Sbjct: 5 LKGLVVLEMAGLAPAPFAGMILGDFGANVIRIDRTSS--ISTDVLVRNKRSIALNLKDSK 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
V L ++D++L+PFR GVME L LGP+++ NPRLIYARLSGYGQ G S++AG
Sbjct: 63 AKQVFIKLCEKADILLDPFRPGVMEALGLGPEIILDRNPRLIYARLSGYGQSG--STVAG 120
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYL SGIL ++G + NP P NL ADF GGGL+C +GI+MALFER KS +GQVID
Sbjct: 121 HDINYLATSGILDMMGRQGENPYYPMNLLADFAGGGLLCVMGILMALFERVKSQKGQVID 180
Query: 183 CNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
+ G+AY+ ++ Q +W+ RG+N+LDGGAHFY+TY+TKDGR+MAVGA+E +F
Sbjct: 181 AGLTAGTAYVATFPFLMQKYGLVWNDERGKNMLDGGAHFYETYKTKDGRYMAVGAIEPEF 240
Query: 242 YAQLLAGLGMTEEE-LPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPVLS 296
YA LL LG +EE +P+ + K+ +KF++ +TQ EW IF +DACVTPVLS
Sbjct: 241 YACLLDKLGFDKEEHIPKQHDKEDWPKMKQKFQDVFLTRTQDEWIAIFAGSDACVTPVLS 300
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA---PGVHTREVLR 353
T+ P PAP LSRTP PG H+ ++L+
Sbjct: 301 FKDNTA-----------------AFPQPAPALSRTPAKRATYSDQTTFLQPGKHSIDILK 343
Query: 354 HFGYSDANIEELI 366
FG S I++++
Sbjct: 344 EFGVSSKEIQQIL 356
>gi|440801409|gb|ELR22429.1| alphamethylacyl-CoA racemase, putative [Acanthamoeba castellanii
str. Neff]
Length = 384
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/384 (45%), Positives = 242/384 (63%), Gaps = 27/384 (7%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-GAQPFVQDTVGYGKKSLCINLK 59
MAL+G+ VLE AGLAP P+CG++L +FGA V+RID+ D + GK+SL ++LK
Sbjct: 1 MALQGLKVLEIAGLAPVPYCGLVLADFGADVVRIDRWPTGGSLSADVLARGKRSLALDLK 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K +G+ + LA ++DV++EPFR GVME+L LGPD +G Y+
Sbjct: 61 KPEGVQTLLRLAEKADVLIEPFRPGVMERLGLGPD-------------------NGYYAQ 101
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ ++G+LSLLG R NP P NL DF GGG++CALGI++A+ ER KSG+GQ
Sbjct: 102 RAGHDINYIAVAGVLSLLGRRGENPLFPGNLLGDFAGGGMLCALGILLAVIERYKSGKGQ 161
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++YL +++ + T +W RG N+LD GA FY+TY TKDG+++AVGA+ES
Sbjct: 162 VVDAAMVDGASYLSTFIHNHRHTGIWGNARGSNVLDSGAPFYETYRTKDGKYVAVGAIES 221
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFY L+ GL + ++E H+ +T + TE+F +T+ EW +FD DACVTPV
Sbjct: 222 QFYHNLIKGLELDKDESLPHQFDTAQWPTLKQTFTERFLSRTRDEWTRVFDGLDACVTPV 281
Query: 295 LSLSQATSHPHNVHRGSFIPNRA--GVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
L L + H HN R N A G P PAPRLSRTP S + +PA G HT+ VL
Sbjct: 282 LELPELMQHQHNKDRALLEENEAEGGRWEPRPAPRLSRTPAYSVRAKASPAAGQHTQAVL 341
Query: 353 RHFGYSDANIEELIREDVIEETIE 376
R +G+ +I L+ + E +
Sbjct: 342 REYGFESDDIARLLASGAVGEETQ 365
>gi|395515824|ref|XP_003762099.1| PREDICTED: alpha-methylacyl-CoA racemase [Sarcophilus harrisii]
Length = 298
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 162/293 (55%), Positives = 209/293 (71%), Gaps = 5/293 (1%)
Query: 86 MEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPT 145
MEK LGP++L K NPRLIYARLSG+GQ G S +AGHDIN+L LSG+LS LG N P
Sbjct: 1 MEKFGLGPEILLKDNPRLIYARLSGFGQLGRLSKVAGHDINFLALSGVLSKLGRSNETPY 60
Query: 146 PPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLW 205
P NL ADFGGG L CALGIV+AL+ER++S +GQVID NMVEG+AYL S+L +++ W
Sbjct: 61 APLNLLADFGGGSLTCALGIVLALYERTQSDKGQVIDANMVEGTAYLSSFLWHSKNLVFW 120
Query: 206 DKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQH----EV 261
++PRG+N+LD GA FY+TY T DG+FMAVGA+E QFYA L+ GLG+ +ELP +
Sbjct: 121 NQPRGKNILDSGAPFYETYRTSDGKFMAVGAIEPQFYALLIKGLGLNCDELPNQLSISDW 180
Query: 262 ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVA 321
E + K + F +KTQAEWC IFD TDACVTP+LSL +A + HN RG+F + V+
Sbjct: 181 EETKKKFADAFAKKTQAEWCNIFDGTDACVTPILSLEEAALNEHNQERGTFFTDEHHNVS 240
Query: 322 PAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIEET 374
P PAP LSRTP T+ +P G HT+E+L+ FG+S+ I +L + +IE +
Sbjct: 241 PRPAPLLSRTPAIPS-TKRDPMEGEHTKEILQEFGFSEDEINQLDSDKIIETS 292
>gi|85372838|ref|YP_456900.1| hypothetical protein ELI_00055 [Erythrobacter litoralis HTCC2594]
gi|84785921|gb|ABC62103.1| hypothetical protein ELI_00055 [Erythrobacter litoralis HTCC2594]
Length = 382
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/369 (47%), Positives = 237/369 (64%), Gaps = 22/369 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFV-QDTVGYGKKSLCI 56
L GI ++EFAG+ P PFCGM+L + GA VIRID+ G+QP +D + G+KS+ +
Sbjct: 5 LNGIRIVEFAGIGPGPFCGMMLADHGAEVIRIDRASGSRGGSQPVTSKDVLARGRKSIAV 64
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK A+G+++ + LA +D I+E FR GVME+L LGPD L K NP+L+Y R++G+GQ GP
Sbjct: 65 DLKSAEGVALARKLAASADGIIEGFRPGVMERLGLGPDELLKDNPKLVYGRMTGWGQTGP 124
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
Y+ AGHDINY+ L+G L+ G PTPP N+ DFGGGG+M A G+V AL ++ G
Sbjct: 125 YAPWAGHDINYIALAGALAHYGRAGGKPTPPINMVGDFGGGGMMLAFGMVSALLNVARGG 184
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVIDC M +G+A L S + ++ +W + G NLLD GAHFYDTYET DG+F+++G+
Sbjct: 185 EGQVIDCAMTDGTAVLMSMMHGMKNMGVWSEELGVNLLDTGAHFYDTYETADGKFISIGS 244
Query: 237 LESQFYAQL--LAGLGMTEEELPQHEVETGRA-------KLTEKFKEKTQAEWCEIFDNT 287
+E QFYA+L LAGL E+ Q + + RA KLT FK +T+ EW ++T
Sbjct: 245 IEPQFYAELRKLAGL----EDDTQFDAQHDRAQWGAMKDKLTVLFKTRTRDEWNATMEHT 300
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH 347
D C PVL++S+A HPHNV R +FI G PAPAPR S T + E P PG
Sbjct: 301 DVCYAPVLTMSEAAQHPHNVARETFI-EVGGDTQPAPAPRYSGTANANP--EPAPMPGDD 357
Query: 348 TREVLRHFG 356
T +L G
Sbjct: 358 TDAILSSLG 366
>gi|452752888|ref|ZP_21952627.1| Alpha-methylacyl-CoA racemase [alpha proteobacterium JLT2015]
gi|451959710|gb|EMD82127.1| Alpha-methylacyl-CoA racemase [alpha proteobacterium JLT2015]
Length = 373
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/373 (45%), Positives = 234/373 (62%), Gaps = 9/373 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+G+ ++E AG+ P PFCGM+L + GA VIRID+ GA+P + +G +KS+ N+K +
Sbjct: 5 LQGLRIIEMAGIGPGPFCGMMLADHGAEVIRIDRPGARP--EPVLGRSRKSVVCNVKTPE 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G+ V++ LA +D E R GVME+L LGPD+L NPRL+Y R++G+GQ GPY+ AG
Sbjct: 63 GVEVVRRLARDADGFFEGLRPGVMERLGLGPDILLGDNPRLVYGRMTGWGQGGPYAQAAG 122
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ LSG L G PTPP N+ DFGGGG+M A G+V A+ ++G+GQV+D
Sbjct: 123 HDINYIALSGALHTYGRAGEKPTPPINMVGDFGGGGMMLAFGMVSAMLHAQRTGQGQVVD 182
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +GSA L + + +W RG NLLD GAHFYDTYET DG+++++G++E QFY
Sbjct: 183 AAMTDGSAALMAMIWGFYGAGMWRDERGVNLLDTGAHFYDTYETADGKWISIGSIEPQFY 242
Query: 243 AQL--LAGL--GMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A+L LAG+ + ++ + + KLT FK +T+ EWC I + TD C PVLSLS
Sbjct: 243 AELRRLAGIEDAAFDAQMDPKGWDALKDKLTALFKTRTRDEWCRIMEGTDVCFAPVLSLS 302
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
+A HPHN R +F+ G+ PAPAPR S T + + P G T VL G+S
Sbjct: 303 EAPQHPHNRARSTFV-EVGGMTNPAPAPRFSETRADAPVPP--PKTGADTDSVLSASGFS 359
Query: 359 DANIEELIREDVI 371
+A I L + I
Sbjct: 360 EAEIAALRDKQAI 372
>gi|331697526|ref|YP_004333765.1| alpha-methylacyl-CoA racemase [Pseudonocardia dioxanivorans CB1190]
gi|326952215|gb|AEA25912.1| Alpha-methylacyl-CoA racemase [Pseudonocardia dioxanivorans CB1190]
Length = 393
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 165/380 (43%), Positives = 234/380 (61%), Gaps = 19/380 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP-----------FVQDTVGYGK 51
L G+ V+E AG+ P P+CGM+L + GA V+R+D+ A P V +G G+
Sbjct: 5 LAGVRVVELAGVGPTPYCGMLLADLGADVVRVDRVPAGPPRTGPAEGLDALVDGILGRGR 64
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
+S+ ++LK GL+ ++L ++D ++E FR GV E+L LGP NPRL+Y RL+G+
Sbjct: 65 RSVALDLKHPDGLAAARDLVARADALVEGFRPGVTERLGLGPRECLARNPRLVYGRLTGW 124
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQDGP ++ AGHD++Y+ ++G+L+ +G R P PP NL DF GGGL+ A GI AL E
Sbjct: 125 GQDGPLAATAGHDLDYIAVAGVLAHVGNRGGRPVPPLNLVGDFAGGGLLMAFGIATALVE 184
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
S+SGRGQV+D MV+G+A L + + WD+ RG N D G+HFYDTYET DG
Sbjct: 185 TSRSGRGQVVDAAMVDGAASLMTMMFEMHGRGGWDERRGTNANDSGSHFYDTYETADGGH 244
Query: 232 MAVGALESQFYAQLLAGLGMT-----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDN 286
+AV A+E +F+A+LL LG+T ++ + A+L F+ +T+AEW ++F
Sbjct: 245 VAVAAMEPRFHAELLDRLGLTGDPAFADQWNPATWDAASARLAAVFRTRTRAEWADVFAG 304
Query: 287 TDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGV 346
+DACV PVL++S+A HPHNV R +F+ AGV P P PR RTPG + P G
Sbjct: 305 SDACVAPVLTMSEAPRHPHNVARATFV-EVAGVSQPGPVPRFDRTPGA--VARAAPTVGE 361
Query: 347 HTREVLRHFGYSDANIEELI 366
HT EVL G + I EL+
Sbjct: 362 HTEEVLAELGRTPERIAELV 381
>gi|297675068|ref|XP_002815518.1| PREDICTED: alpha-methylacyl-CoA racemase-like isoform 1 [Pongo
abelii]
Length = 288
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 158/269 (58%), Positives = 208/269 (77%), Gaps = 1/269 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G +S +
Sbjct: 60 PRGAAVLRRLCERSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFSRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGAAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLT 269
FY L+ GLG Q E + +A+ T
Sbjct: 240 FYELLIKGLGELILLKIQQETVSCQARQT 268
>gi|291301368|ref|YP_003512646.1| L-carnitine dehydratase/bile acid-inducible protein F
[Stackebrandtia nassauensis DSM 44728]
gi|290570588|gb|ADD43553.1| L-carnitine dehydratase/bile acid-inducible protein F
[Stackebrandtia nassauensis DSM 44728]
Length = 380
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 176/378 (46%), Positives = 234/378 (61%), Gaps = 10/378 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-----DTVGYGKKSLCIN 57
L GI V+E A LAPAPF +L++ GA V+R+D+ P + +G G++S+ ++
Sbjct: 4 LSGIRVIELASLAPAPFTATVLSDLGAEVLRLDRAETVPSTTGSPPPEPLGRGRRSVAVD 63
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK+ G S++ +L ++DV+LE FR GV E+L +GPD NPRL+Y RL+G+GQ GP
Sbjct: 64 LKRPGGASLVLDLVGRTDVLLEGFRPGVCERLGIGPDACLARNPRLVYGRLTGWGQTGPL 123
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINYL LSG L +G + PTPP N ADFGGGG++ A+G++ ALFER +SG
Sbjct: 124 AQRAGHDINYLALSGALYPIGPADGPPTPPINYVADFGGGGMLLAVGVLAALFERERSGA 183
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQVID M EG+ L S L + +W RG N LDG A FY TY DG F+AVGAL
Sbjct: 184 GQVIDAAMTEGAGLLSSLLHGLKARGMWSDERGGNPLDGTAPFYGTYACADGGFVAVGAL 243
Query: 238 ESQFYAQLLAGLGMTEE--ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
E QFYA+L+ GL + + + Q R + + F +T+ EW +F+ TDACVTPVL
Sbjct: 244 EPQFYAELVKGLELIDPPTQYDQSGWPEARRRFADAFASRTRDEWAAVFEGTDACVTPVL 303
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+L +A HPHN R SF AG+ PAPAPRLSRTPG + P PG HTR L +
Sbjct: 304 TLDEAPDHPHNRARASFT-EVAGLRQPAPAPRLSRTPGA--VAGPAPQPGEHTRAALTDW 360
Query: 356 GYSDANIEELIREDVIEE 373
G S ++ L V+ E
Sbjct: 361 GISAEDLAGLFATGVLSE 378
>gi|281200414|gb|EFA74634.1| hypothetical protein PPL_11602 [Polysphondylium pallidum PN500]
Length = 403
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 246/398 (61%), Gaps = 25/398 (6%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCIN 57
+ L+G+ VLE +GLAP P+CG+IL +FGATVIR+D+ V D + GK S+ IN
Sbjct: 6 LPLEGLVVLEMSGLAPVPYCGLILADFGATVIRVDRVVGDSIVSQPIDQLTRGKHSIAIN 65
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G+ V+++LA ++DV+++ +R GVMEKL L P+ L PRLIYARL+G+GQ GPY
Sbjct: 66 LKHKEGVEVLRSLAKKADVLIDSYRPGVMEKLGLSPESLMSEAPRLIYARLTGFGQTGPY 125
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ LSG LS+LG R + P P N+ DF GG+MCALGI+ AL+ER +GR
Sbjct: 126 ALRAGHDINYIALSGALSVLGRRGQAPLFPSNILGDFASGGMMCALGIMFALYERKSTGR 185
Query: 178 GQVIDCNMVEGSAYLGSWL--TRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G++ID +M++G+AYL +++ R T WD RG N LD GAHFY+ YET D ++++VG
Sbjct: 186 GKLIDSSMMDGAAYLATFIYKLRVGRTGWWDNDRGCNALDSGAHFYEVYETLDHKYISVG 245
Query: 236 ALESQFYAQLLAGLGMTEE-ELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDAC 290
A+E FY++LL G+G+ E +LP +T ++ + FKE KT+ EW +IF TDAC
Sbjct: 246 AIEGPFYSELLKGMGLAERTDLPDQTDQTQWPRMKQLFKEIFAKKTRDEWEQIFMGTDAC 305
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKI------------- 337
V PVL + + T HP R G+ APRL T+K+
Sbjct: 306 VAPVLEMHELTGHPQATARQLVFKGDNGLDV-MMAPRLFDVQNTTKLSIQQQQQQQIDQL 364
Query: 338 -TEHNPAPGVHTREVLRHFGYSDANIEELIREDVIEET 374
T+ G +T VL+ FG+ +I+ LI + T
Sbjct: 365 STKKLVVEGANTVTVLKKFGFESDDIDRLIESKNMNRT 402
>gi|154253528|ref|YP_001414352.1| L-carnitine dehydratase/bile acid-inducible protein F [Parvibaculum
lavamentivorans DS-1]
gi|154157478|gb|ABS64695.1| L-carnitine dehydratase/bile acid-inducible protein F [Parvibaculum
lavamentivorans DS-1]
Length = 376
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 164/374 (43%), Positives = 235/374 (62%), Gaps = 8/374 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG-YGKKSLCINLKKA 61
L GI V+EFAG+ P PFC M+L++ GA +IRID+ G + + +G G++S+ ++LKK
Sbjct: 6 LSGIKVVEFAGIGPGPFCAMLLSDMGADIIRIDRKGGRGGSKYDIGSRGRRSVALDLKKP 65
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ + L +D++ E FR GVME+L LGPDV K NP+L+Y R++G+GQ GP ++ A
Sbjct: 66 ESVEACLKLIENADILQEGFRPGVMERLGLGPDVCLKRNPKLVYGRMTGWGQTGPLANAA 125
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G L +G P PP NL DFGGG L A+G++ AL E +SG+GQV+
Sbjct: 126 GHDINYISLTGALHAIGRPGEKPVPPLNLVGDFGGGALYLAMGMLAALVEAQRSGKGQVV 185
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M +G+ L + + +W +P G N+LDGGAHFYDTYETKDG+++++G++E QF
Sbjct: 186 DAAMTDGATSLMAMFYGFTASGMWQEPHGTNMLDGGAHFYDTYETKDGKWISIGSIEPQF 245
Query: 242 YAQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA L G+T + ++ + + + K+ FK KT+ EWC I + TD C PVLS+
Sbjct: 246 YAILREKAGLTDAYWDAQMDRGQWPEMKKKIEAVFKTKTRDEWCSIMEGTDICFAPVLSI 305
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
S+A HPHN R + + GV P APR SRT SKI P G HT L+ +G+
Sbjct: 306 SEAIDHPHNKARQTIV-EIDGVAQPNIAPRFSRT--ESKIQGPAPTVGEHTESALKDWGF 362
Query: 358 SDANIEELIREDVI 371
S +IE L + + I
Sbjct: 363 SAGDIEGLKKAEAI 376
>gi|296282906|ref|ZP_06860904.1| hypothetical protein CbatJ_04768 [Citromicrobium bathyomarinum
JL354]
Length = 382
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 234/374 (62%), Gaps = 14/374 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFV-QDTVGYGKKSLCI 56
L G+ ++EFAG+ P PFCGM+L + GA VIRID+ G+QP +D + G+KS+ +
Sbjct: 5 LAGLRIVEFAGIGPGPFCGMMLADHGAEVIRIDRASGGRGGSQPISNKDILARGRKSIAL 64
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
NLK +G+++ + L +D ++E FR GVME+L LGP+VL NP+LIY R++G+GQ GP
Sbjct: 65 NLKSEQGIALARKLCASADGLIEGFRPGVMERLGLGPEVLLADNPKLIYGRMTGWGQTGP 124
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
Y+ AGHDINY+ L+G L+ G PTPP N+ DFGGGG+M A G+V AL ++ G
Sbjct: 125 YAPYAGHDINYIALAGALAHFGRAGEKPTPPINMVGDFGGGGMMLAFGMVSALLNVARGG 184
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVID M +G+A L + + LW + G NLLD GAHFYDTYET DG+F+++G+
Sbjct: 185 EGQVIDAAMTDGTAVLMGMIHGMANQGLWREETGTNLLDTGAHFYDTYETADGKFVSIGS 244
Query: 237 LESQFYAQLLAGLGMTEE-----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E QFYA+L A LG+ E+ ++ + + KL F+ KT+AEW E +++D C
Sbjct: 245 IEPQFYAELRARLGLAEDPDFDAQMNPSQWPALKDKLAAIFRTKTRAEWDEALEHSDVCY 304
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVL++S+A HPH R +FI A PAPAPR S T + P PG T ++
Sbjct: 305 APVLTMSEAREHPHIAARETFI-EVADSPQPAPAPRYSGT--ATATPSPAPMPGDDTSDI 361
Query: 352 LRHFGYSDANIEEL 365
L G S+ I E
Sbjct: 362 LAQLGLSEGEIAEF 375
>gi|76779723|gb|AAI06491.1| LOC733363 protein [Xenopus laevis]
Length = 257
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 199/246 (80%), Gaps = 2/246 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL GI VLE AGLAPAPFCGMIL +FGA VIR+DK G+ DT+ GK+S+ +NLK
Sbjct: 1 MALTGIRVLELAGLAPAPFCGMILADFGAKVIRVDKAGSGT-TMDTLARGKRSIAVNLKS 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+S++K L +SDV++EPFR GVME L LGPD++ + NP+LIYARL+G+GQ G Y+
Sbjct: 60 PEGISLLKKLCKKSDVLIEPFRHGVMENLGLGPDIMLQENPQLIYARLTGFGQSGKYAKA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ +SG+LS LG +N +PTPP NL ADF GGGL CALGIVM+LFER+KSG+GQV
Sbjct: 120 AGHDINYVSISGLLSKLGDKN-SPTPPLNLLADFAGGGLTCALGIVMSLFERTKSGKGQV 178
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
IDC+MVEG+AYLGS++ ++Q LW GEN+LDGG+ FY TY+T DG+FMAVGA+E+Q
Sbjct: 179 IDCSMVEGAAYLGSFVWKSQKLGLWSNSPGENMLDGGSPFYSTYKTADGKFMAVGAIETQ 238
Query: 241 FYAQLL 246
FYA+LL
Sbjct: 239 FYAELL 244
>gi|218778764|ref|YP_002430082.1| L-carnitine dehydratase/bile acid-inducible protein F
[Desulfatibacillum alkenivorans AK-01]
gi|218760148|gb|ACL02614.1| Acyl-CoA transferase [Desulfatibacillum alkenivorans AK-01]
Length = 378
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 240/376 (63%), Gaps = 21/376 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQDTVGYGKKSLCINLK 59
L+GIT++E AG+ P PFCGM+L + GATVIR+++ G D + G+KS+ +NLK
Sbjct: 4 LEGITIIELAGIGPGPFCGMMLADMGATVIRVERTGPSGLGSLPGDVLARGRKSVAVNLK 63
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G +V+ L ++D I E FR GV E++ +GP+ K NP+L+Y R++G+GQ+GP S
Sbjct: 64 NPEGQAVVLKLCEKADAIFEGFRPGVAERMGVGPEDCWKVNPKLVYGRMTGWGQEGPLSQ 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+GHDINY+ L+G L +G + + P PP NL DFGGGG++ A G+V AL E KSG+GQ
Sbjct: 124 ASGHDINYISLAGALHAIGRKGQTPVPPLNLVGDFGGGGMLLAFGMVCALLEAQKSGKGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLW-DKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D MV+G+A L + ++ +W DK R NLLDGGAHFYDTYETKDG+++++G++E
Sbjct: 184 VVDAAMVDGAATLMAMFFTFKNLGMWNDKERQVNLLDGGAHFYDTYETKDGKYISLGSIE 243
Query: 239 SQFYAQLLAGLGMTEEEL---------PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDA 289
QFY LL + ++ P+ +VE L E K+KT+ EWCEI + +D
Sbjct: 244 PQFYELLLQKAELDRDKFGNQMNFGAWPELKVE-----LAEVIKQKTRDEWCEIMEGSDV 298
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
C PVL+LS+A HPHN R +F+ GV+ PAP+PR SRT +++T P G T
Sbjct: 299 CFAPVLNLSEAPEHPHNKLRKTFV-ELDGVLQPAPSPRFSRT--EAELTNSAPKVGQDTD 355
Query: 350 EVLRHFGYSDANIEEL 365
VL G+S I +L
Sbjct: 356 AVLTDCGFSAEEIAKL 371
>gi|313227092|emb|CBY22239.1| unnamed protein product [Oikopleura dioica]
Length = 371
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 178/376 (47%), Positives = 231/376 (61%), Gaps = 11/376 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+ I VLE AGLAP P+CG +L + GA VIR+D+ G+ F D GKKS+ +N+K
Sbjct: 1 MALRKIRVLELAGLAPVPYCGQVLADLGAEVIRVDRAGSA-FNIDQQSRGKKSIALNMKD 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G ++++LA SDV+L+PFR GVME+L GP+ + +N RLI+ARLSG+GQ GP +
Sbjct: 60 HSGQKILRSLARSSDVLLDPFRPGVMERLNCGPERI--ANERLIFARLSGFGQTGPMRDV 117
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL SG+L L P PP NL ADF GGG M ALG+ AL ER +G+GQV
Sbjct: 118 AGHDINYLAQSGVLDSLRDSTGKPLPPINLVADFAGGGAMMALGVTSALIERGNTGKGQV 177
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D M EG+AY +L + F K G N+LDGGA FY YETKD RFMA+GA+E Q
Sbjct: 178 LDLAMSEGAAYASGFLWSMKSLFPGTK--GSNMLDGGAPFYGVYETKDCRFMALGAIEPQ 235
Query: 241 FYAQLL--AGLGMTE---EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY L + LG E +++ Q E E R + EKF EKTQAEW IF TDACV+PV+
Sbjct: 236 FYQVFLEKSKLGDVEGLPDQMDQTEWENLRKIIAEKFLEKTQAEWTCIFHLTDACVSPVM 295
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+ +A + HN R SF+ + G P P PR S + GT + P G HT E+L
Sbjct: 296 TAEEAAENEHNKERNSFVLDEHGEYFPRPVPRSSSSIGTDAVPIIQPKVGEHTVEILSEL 355
Query: 356 GYSDANIEELIREDVI 371
YS + + ++
Sbjct: 356 -YSKREVRSFLENGIV 370
>gi|197105079|ref|YP_002130456.1| acyl-CoA transferase/carnitine dehydratase [Phenylobacterium
zucineum HLK1]
gi|196478499|gb|ACG78027.1| predicted acyl-CoA transferase/carnitine dehydratase
[Phenylobacterium zucineum HLK1]
Length = 371
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/369 (43%), Positives = 231/369 (62%), Gaps = 11/369 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-QDTVGYGKKSLCINLKKA 61
L G+ ++EFAG+ P PFCGM+L++ GA VIRID+ G + D G++S+ ++LK
Sbjct: 6 LTGLKIVEFAGIGPGPFCGMLLSDLGADVIRIDRKGGRGGAPSDITARGRRSVALDLKSP 65
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ L +D + E FR GVME+L LGPDV K NP+L+Y R++G+GQ GPY+ A
Sbjct: 66 AAVEACLKLMETADAVFEGFRPGVMERLGLGPDVALKRNPKLVYGRMTGWGQTGPYAHAA 125
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ ++G L +G +++ P PP NL DFGGG L A G++ + + ++G+GQV+
Sbjct: 126 GHDMNYIAITGALHAIGTKDK-PVPPLNLVGDFGGGALYLAFGLLAGVIQARETGKGQVV 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
DC M +G+A L + + + +W + R NLLDGGAHFYDTY+ DG+++++G++E QF
Sbjct: 185 DCAMSDGAASLMAMFYGFKASGMWTEERRANLLDGGAHFYDTYQCSDGKWVSIGSIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
YA LL G+T+ + Q +++ R KL +T+ EWC + + TD C PVL
Sbjct: 245 YALLLEKTGITDPDF-QRQMDKAAWPMLREKLAAVIATRTRDEWCALMEATDVCFAPVLD 303
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L +A H HN R +F+ AGV PAPAPR S TPG I P G HTRE L +G
Sbjct: 304 LDEAPKHAHNAARQTFV-EVAGVTQPAPAPRFSATPGA--IQSPPPQVGAHTREALSEWG 360
Query: 357 YSDANIEEL 365
++DA IE L
Sbjct: 361 FTDAEIEAL 369
>gi|313220985|emb|CBY31818.1| unnamed protein product [Oikopleura dioica]
Length = 371
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/376 (47%), Positives = 231/376 (61%), Gaps = 11/376 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+ I VLE AGLAP P+CG +L + GA VIR+D+ G+ F D GKKS+ +N+K
Sbjct: 1 MALRKIRVLELAGLAPVPYCGQVLADLGAEVIRVDRAGSA-FNIDQQSRGKKSIALNMKD 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G ++++LA SDV+L+PFR GVME+L GP+ + +N RLI+ARLSG+GQ GP +
Sbjct: 60 HSGQKILRSLARSSDVLLDPFRPGVMERLNCGPERI--ANERLIFARLSGFGQTGPMRDV 117
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL SG+L L P PP NL ADF GGG M ALG+ AL ER +G+GQV
Sbjct: 118 AGHDINYLAQSGVLDSLRDSTGKPLPPINLVADFAGGGAMMALGVTSALIERGNTGKGQV 177
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D M EG+AY +L + F K G N+LDGGA FY YETKD RFMA+GA+E Q
Sbjct: 178 LDLAMSEGAAYASGFLWSMKSLFPGTK--GSNMLDGGAPFYGVYETKDCRFMALGAIEPQ 235
Query: 241 FYAQLL--AGLGMTE---EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY L + LG E +++ Q E E R + EKF EKTQAEW IF TDACV+PV+
Sbjct: 236 FYQVFLEKSKLGDVEGLPDQMDQTEWENLRKIIAEKFLEKTQAEWTCIFHLTDACVSPVM 295
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+ +A + HN R SF+ + G P P PR S + GT + P G HT E+L
Sbjct: 296 TAEEAAENEHNKERNSFVLDEHGEYFPHPVPRSSNSIGTDAVPIIQPKVGEHTVEILSEL 355
Query: 356 GYSDANIEELIREDVI 371
YS + + ++
Sbjct: 356 -YSKREVRSFLENGIV 370
>gi|341614133|ref|ZP_08701002.1| hypothetical protein CJLT1_04232 [Citromicrobium sp. JLT1363]
Length = 382
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 236/376 (62%), Gaps = 18/376 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPF-VQDTVGYGKKSLCI 56
L G+ ++EFAG+ P PFCGM+L + GA VIR+D+ G+QP +D + G+KS+ +
Sbjct: 5 LSGLRIVEFAGIGPGPFCGMMLADHGAEVIRVDRASGGRGGSQPVSTKDVLARGRKSIAL 64
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G+++ + L +D ++E FR GVME+L LGP+VL NP+L+Y R++G+GQ GP
Sbjct: 65 DLKARQGIALARKLCASADGLIEGFRPGVMERLGLGPEVLLSDNPKLVYGRMTGWGQSGP 124
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
Y+ AGHDINY+ L+G L+ G PTPP N+ DFGGGG+M A G+V AL ++ G
Sbjct: 125 YAPYAGHDINYIALAGALAHFGRAGEKPTPPINMVGDFGGGGMMLAFGMVSALLSVARGG 184
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVID M +G+A L + + + LW + G NLLD GAHFYDTYET DG+F+++G+
Sbjct: 185 EGQVIDAAMTDGTAVLMAMIHGMANQGLWREDLGANLLDTGAHFYDTYETADGKFVSIGS 244
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRA-------KLTEKFKEKTQAEWCEIFDNTDA 289
+E QFYA+L A +G+ ++ P + + A KL F KT+AEW E +++D
Sbjct: 245 IEPQFYAELRARVGLADD--PAFDAQMNPAAWPDLKEKLAAIFARKTRAEWDEALEHSDV 302
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
C PVL++S+A HPHN+ R +F+ + AG PAPAPR S T + + P PG T
Sbjct: 303 CYAPVLTMSEAREHPHNIARETFV-DVAGSPQPAPAPRYSGT--ATATPDAAPMPGDDTD 359
Query: 350 EVLRHFGYSDANIEEL 365
+L G I L
Sbjct: 360 AILADLGIDAGEIAAL 375
>gi|375094896|ref|ZP_09741161.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora marina XMU15]
gi|374655629|gb|EHR50462.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora marina XMU15]
Length = 381
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/372 (47%), Positives = 237/372 (63%), Gaps = 12/372 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E AGLAPAPF IL + GA VIR+D+ V D + ++++ +N
Sbjct: 6 LSGLKVIELAGLAPAPFACTILADLGADVIRVDRAAPGEDVLGMPYDPLLRSRRTIGVNT 65
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A+G+ ++ LA ++DV++E FR GV E++ LGP + NPRL+Y R++G+GQDGP +
Sbjct: 66 KTAEGVELVLRLAERADVLVEGFRPGVAERMGLGPQQVHARNPRLVYGRITGWGQDGPLA 125
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYLGLSG L +G P PP N ADFGGGGL A+G++ ALFER+ SG+G
Sbjct: 126 PRAGHDINYLGLSGALHAIGRAGERPLPPVNFLADFGGGGLFLAMGVLAALFERACSGQG 185
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +MV+G+A L + L + + LWD RGEN+LD GA FYDTYET DG+++AVGALE
Sbjct: 186 QVVDASMVDGAALLTTHLHGLRASGLWDGERGENMLDTGAPFYDTYETADGKYVAVGALE 245
Query: 239 SQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+F+A L+ LG+ +EELP H E R L+E + T+ E + TDAC+TPV
Sbjct: 246 MRFWAALVRVLGLEDEELPNHLDKREWPRLREILSETIGKYTRDELVAKAEGTDACLTPV 305
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL-R 353
LS +A SHPHN RG+F+ GVV PAP P+ RTP + + H G T VL
Sbjct: 306 LSPWEAASHPHNEARGTFV-EVDGVVQPAPGPKFDRTPAPAPVPPHE--KGADTAAVLSE 362
Query: 354 HFGYSDANIEEL 365
G +D IE L
Sbjct: 363 ELGLADDEIERL 374
>gi|193785675|dbj|BAG51110.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/269 (58%), Positives = 206/269 (76%), Gaps = 1/269 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP PFC M+L +FGA V+R+D+ G++ V +G GK+SL ++LK+
Sbjct: 1 MALQGISVMELSGLAPGPFCAMVLADFGARVVRVDRPGSRYDV-SRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++ +GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTDKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLT 269
FY L+ GLG Q E + +A+ T
Sbjct: 240 FYELLIKGLGELILLKIQQEAVSCQARQT 268
>gi|331699252|ref|YP_004335491.1| alpha-methylacyl-CoA racemase [Pseudonocardia dioxanivorans CB1190]
gi|326953941|gb|AEA27638.1| Alpha-methylacyl-CoA racemase [Pseudonocardia dioxanivorans CB1190]
Length = 387
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/365 (43%), Positives = 230/365 (63%), Gaps = 12/365 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF------VQDTVGYGKKSLCI 56
L+GI V+E G+ P PF M++ + GA V+RID+ +P +D + G++S+ +
Sbjct: 6 LQGIRVVELGGIGPGPFAAMLMADLGAEVVRIDRPPREPLGEHQQHERDLLLRGRRSIAL 65
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK A G+ V L +++DV+L+PFR GV E+L +GP+ NP L+YAR++G+GQ GP
Sbjct: 66 DLKSADGVEVALRLTDRADVLLDPFRPGVAERLGIGPETATSRNPGLVYARMTGWGQTGP 125
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+S+AGHD+NY+ L+G L+ +G R P P NL DFGGGG++ A G+ AL ER++SG
Sbjct: 126 LASVAGHDLNYVALAGPLAAMGRRGSPPAPALNLIGDFGGGGMLLAFGVTAALVERNRSG 185
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQVID M +G A L + + + +W R N LDGGA +YD+YET DGR + +G+
Sbjct: 186 RGQVIDVAMTDGVAALSASIVGFTNMGVWRPERESNFLDGGAPYYDSYETSDGRHVTIGS 245
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+E QFYA LL LG+ E PQ + A+L E F+ +T+ EWCE+ + TD C P
Sbjct: 246 IEPQFYALLLDKLGLDAAEWPQDDRRRWPELHARLAEIFRGRTRDEWCELLEGTDVCFAP 305
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VL +A HPH RG+++ G++ PAP PR SRTPG I +PG HTREVL
Sbjct: 306 VLGFDEAPKHPHLAARGTYV-EEHGMLQPAPVPRFSRTPGA--IQTPPCSPGQHTREVLA 362
Query: 354 HFGYS 358
+G++
Sbjct: 363 DWGFT 367
>gi|332027933|gb|EGI67987.1| Alpha-methylacyl-CoA racemase [Acromyrmex echinatior]
Length = 295
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 167/286 (58%), Positives = 206/286 (72%), Gaps = 2/286 (0%)
Query: 86 MEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPT 145
MEKL++GP+ L +N +LIYARL+GYGQ+G +++MAGHDINYLGLSG+LSL G N P
Sbjct: 1 MEKLKIGPNELLATNKKLIYARLTGYGQNGSFANMAGHDINYLGLSGLLSLFGRYNEKPI 60
Query: 146 PPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLW 205
PP NLAADFGGGGLMCA GI++AL+ER+KS GQVID +MVEGSAYLGSWL R+Q +W
Sbjct: 61 PPINLAADFGGGGLMCAFGIILALYERTKSNVGQVIDASMVEGSAYLGSWLFRSQKMGIW 120
Query: 206 DKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHE-VETG 264
+ PRG+NLLD G+HFYDTYETKD FM VGA+E QFY L LG++ +E+PQ++ E
Sbjct: 121 ENPRGKNLLDTGSHFYDTYETKDKLFMCVGAIEPQFYEIFLEKLGLSSDEIPQYKNFEEN 180
Query: 265 RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAP 324
R K+TE FK KTQAEWC IFD TDACVTPVL+L H HN R +F + P P
Sbjct: 181 RRKITEIFKTKTQAEWCAIFDGTDACVTPVLNLKDVMLHIHNKQRQTFTI-VGNNLFPNP 239
Query: 325 APRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDV 370
APRLSRTPG S + NP G +T +VL + I+ L+ +
Sbjct: 240 APRLSRTPGISLGVQRNPQVGENTIQVLTELKFQPNEIDYLLSNGI 285
>gi|16126084|ref|NP_420648.1| hypothetical protein CC_1841 [Caulobacter crescentus CB15]
gi|221234854|ref|YP_002517290.1| alpha-methylacyl-CoA racemase [Caulobacter crescentus NA1000]
gi|13423280|gb|AAK23816.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964026|gb|ACL95382.1| alpha-methylacyl-CoA racemase [Caulobacter crescentus NA1000]
Length = 375
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 164/369 (44%), Positives = 229/369 (62%), Gaps = 11/369 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQDTVGYGKKSLCINLKKA 61
L G+ ++EFAG+ P PFCGM+L++ GA V+RID+ G + D G++S+ ++LK
Sbjct: 6 LSGLKIVEFAGIGPGPFCGMLLSDLGADVVRIDRKGQGRGSPADVTARGRRSVALDLKNP 65
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ + L Q+D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ GPY+ A
Sbjct: 66 ESIETCLKLLEQADGLIEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQTGPYAKAA 125
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ ++G L +G P PP NL DFGGG L A G++ + +G+GQVI
Sbjct: 126 GHDMNYIAITGALHAIG-TTEKPVPPLNLVGDFGGGALYLAFGLLAGVIHARSTGQGQVI 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
DC M +G+A L + + LW++ R NLLDGGAHFYDTYE DG+++++G++E QF
Sbjct: 185 DCAMSDGAASLMAMFYGFKAGGLWNEGRRSNLLDGGAHFYDTYECSDGKWISIGSIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
Y LL G+T+ + QH++ KL K KTQAEWCEI D TD C PVL+
Sbjct: 245 YLLLLEKTGITDPQF-QHQMSREEWPQLHDKLAAVIKTKTQAEWCEIMDATDVCFAPVLT 303
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ +A HPHN R +F+ AGV PAPAPR S TPG I P G H E L +G
Sbjct: 304 MDEAPKHPHNAARQTFV-EVAGVTQPAPAPRFSATPGA--IQGPPPKIGGHNDEALSDWG 360
Query: 357 YSDANIEEL 365
++ + IE L
Sbjct: 361 FNPSAIEAL 369
>gi|375101534|ref|ZP_09747797.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora cyanea NA-134]
gi|374662266|gb|EHR62144.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora cyanea NA-134]
Length = 383
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/371 (45%), Positives = 237/371 (63%), Gaps = 11/371 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFV---QDTVGYGKKSLCINL 58
L G+ V+E AGLAPAPF +L + GA V+RID+ G + + +D + G++++ +N
Sbjct: 9 LSGLRVVELAGLAPAPFACTMLADLGAEVVRIDRVSGGEDVLAIPRDPLLRGRRTIGLNT 68
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G+ V+ LA ++DV +E FR GV E++ LGP+ + NPR++Y R++G+GQDGP +
Sbjct: 69 KTPEGVEVVLKLAERADVFVEGFRPGVAERMGLGPEAVHARNPRVVYGRITGWGQDGPLA 128
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+GLSG L +G R P PP N ADFGGGG+ A+G++ ALFER SGRG
Sbjct: 129 HTAGHDINYIGLSGALHPIGRRGERPVPPVNFLADFGGGGMYLAMGVLAALFERQTSGRG 188
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +MV+GSA L + L + LW+ RGEN+LDGGA FYDTYET DGR++AVGA+E
Sbjct: 189 QVVDASMVDGSALLTTHLFGLKANGLWEGERGENVLDGGAPFYDTYETADGRYVAVGAIE 248
Query: 239 SQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
++F+A L+ L + E +P H + R L + ++T+ E + TDAC+TPV
Sbjct: 249 TKFFAALVDVLELDPEAVPSHLDSRQWPRLREVLADAIGKRTRDELVARAEGTDACLTPV 308
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LS +A HPHN RG+F+ + GV PAP P+ RTP + H A G T +VL
Sbjct: 309 LSPWEAPDHPHNAARGTFV-DVDGVTQPAPGPKFDRTPAQAPQPPH--ARGSDTLDVLEE 365
Query: 355 FGYSDANIEEL 365
GY ++ L
Sbjct: 366 LGYDSDDVRSL 376
>gi|384566615|ref|ZP_10013719.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora glauca K62]
gi|384522469|gb|EIE99664.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora glauca K62]
Length = 382
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/370 (45%), Positives = 233/370 (62%), Gaps = 10/370 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E AGLAPAPF +L + GA V+R+++ G + + +D + G++++ +N K
Sbjct: 9 LSGLKVVELAGLAPAPFACTVLADLGAEVVRVERVGGEDVLAMPRDPLLRGRRTIGVNTK 68
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G+ ++ L ++DV +E FR GV E++ LGP+ + NPR++Y R++G+GQDGP +
Sbjct: 69 TPEGVEIVLRLVERADVFVEGFRPGVTERMGLGPEQVHARNPRVVYGRITGWGQDGPLAR 128
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+GLSG L +G R P PP N ADFGGGG+ A+G++ ALFER SG+GQ
Sbjct: 129 TAGHDINYIGLSGALHPIGRRGERPVPPVNFLADFGGGGMYLAMGVLAALFERQTSGKGQ 188
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +MV+GSA L + L + + LWD RGENLLDGGA FYDTYET DGR++AVGA+E
Sbjct: 189 VVDASMVDGSALLTTHLFGLRASGLWDGERGENLLDGGAPFYDTYETADGRYVAVGAIEE 248
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+F+A L+ L + E +P T R L E + T+ E + TDAC+TPVL
Sbjct: 249 KFFAALVEVLELDPETVPPRLDRTQWPRLRELLAEAIGKHTRDELVARAEGTDACLTPVL 308
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
S +A HPHNV RG+F+ + GV PAP P+ RTP H G T EVLR
Sbjct: 309 SPWEAPHHPHNVARGTFV-DIDGVTQPAPGPKFDRTPPDVPQPPHE--RGSDTVEVLREL 365
Query: 356 GYSDANIEEL 365
GY I L
Sbjct: 366 GYDGDGIRSL 375
>gi|328868585|gb|EGG16963.1| hypothetical protein DFA_07944 [Dictyostelium fasciculatum]
Length = 487
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 247/389 (63%), Gaps = 26/389 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L GI V+E AGLAPAPFCGM++ + GATVIR+D+ QP D + GKKS+ I
Sbjct: 94 LNGIKVIELAGLAPAPFCGMVMADLGATVIRVDRVQDDGTIVGQPM--DQLTRGKKSIAI 151
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLC-KSNPRLIYARLSGYGQDG 115
NLK+ +G++++ +L QSDV+++ +R GV+EKL L P +L K NPRLI ARL+GYGQ G
Sbjct: 152 NLKQREGVALLADLCAQSDVLIDCYRPGVLEKLGLCPRMLLEKKNPRLIVARLTGYGQQG 211
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
Y+ MAGHDINY+ LSG LSL G +N P P N+ DF GGGL+CA GIV++L+ RS +
Sbjct: 212 DYAKMAGHDINYIALSGALSLFGRKNEPPVFPANILGDFAGGGLLCAFGIVVSLYNRSVT 271
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTF--LWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
G+GQ+ID +M++G+AYL +++ + + +WD RG+N LD GAH+Y+ Y TKD ++++
Sbjct: 272 GKGQIIDSSMMDGAAYLSTFVYKLKQARNGMWDNARGDNFLDTGAHYYEVYRTKDNKYIS 331
Query: 234 VGALESQFYAQLLAGLGMTEEELPQ-------HEVETGRAKLTEKFKEKTQAEWCEIFDN 286
VGA+E FYA L+A +G++ EE+ Q + + + F+ KT+ EW IF
Sbjct: 332 VGAIEPHFYATLIAKMGLSSEEVDQLPDQNDSQQWPAMKKRFQSIFETKTRDEWESIFKG 391
Query: 287 TDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAP---APRLSRTPGTSKITEHNPA 343
TDACV PVL + + +HPH+ S + N + PAP P + S+ +
Sbjct: 392 TDACVAPVLEMDELHNHPHS----SRLINNEKEINPAPRFLIPVAATKNEQSQQQANTIV 447
Query: 344 PGVHTREVLRH-FGYSDANIEELIREDVI 371
G T +VL+ + YS + I LI+ ++I
Sbjct: 448 TGGDTIQVLKDLYQYSPSTITLLIKSNII 476
>gi|269126100|ref|YP_003299470.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermomonospora curvata DSM 43183]
gi|268311058|gb|ACY97432.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermomonospora curvata DSM 43183]
Length = 384
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 170/380 (44%), Positives = 232/380 (61%), Gaps = 14/380 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQDTVGYGKKSLCINL 58
L GI V+E AG+ P PF M+L + GA VIR+D+ GA D GK+S+ ++L
Sbjct: 9 LTGIRVIELAGIGPGPFAAMLLADLGAEVIRVDRASAVSGAGQATTDFTNRGKRSIAVDL 68
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K KG V+ L ++DV+LE FR GV E+L LGPD NP+L+Y R++G+GQ G S
Sbjct: 69 KSEKGKQVVLRLVEKADVLLEGFRPGVTERLGLGPDDCLAVNPKLVYGRMTGWGQHGRLS 128
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ ++G L +G P P NL DF GG + +G++ AL E SGRG
Sbjct: 129 QSAGHDIGYIAITGALHAIGRAGGPPQVPMNLLGDFAGGSMYLVVGVLAALLEARISGRG 188
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L +++ +W RG N+LD GA +YD YET DG+++AVGA+E
Sbjct: 189 QVVDAAIVDGTAHLTTFIHAFLAGGMWTDERGVNMLDTGAPWYDVYETADGKYVAVGAIE 248
Query: 239 SQFYAQLLAGLGMTE-EELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
QFYA+ L LG+ + +ELP G R + E FK KT+ EW EIF DACV P
Sbjct: 249 PQFYAEFLRRLGIEDADELPAQHDRAGWPVLRKRFAEAFKTKTRDEWAEIFLPGDACVAP 308
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLSL +A HP+N R F+ R G + PAPAPR SRTPG I+ PG HTR+VL
Sbjct: 309 VLSLKEAAEHPYNTEREVFV-ERDGHLQPAPAPRFSRTPGA--ISGSPALPGQHTRQVLE 365
Query: 354 HFGYSDANIEELIREDVIEE 373
FG++D ++EL+ E + +
Sbjct: 366 EFGFTD--VDELLAEGAVAQ 383
>gi|241628401|ref|XP_002409975.1| alpha-methylacyl-CoA racemase, putative [Ixodes scapularis]
gi|215503274|gb|EEC12768.1| alpha-methylacyl-CoA racemase, putative [Ixodes scapularis]
Length = 385
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 188/383 (49%), Positives = 239/383 (62%), Gaps = 20/383 (5%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MALKGI VLE AGLAP PFCGM+L +FGATVIR+D+ + D + C++ +
Sbjct: 2 MALKGIKVLEMAGLAPGPFCGMVLRDFGATVIRVDRVSPIRNLSDNI-----PACLSKCR 56
Query: 61 AKG----LSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
KG +V + S L GVME++ LGPDVL ++NPRL+YAR++G+GQ GP
Sbjct: 57 DKGGTYRCAVPSPRQDCSRQCLA--NAGVMERVGLGPDVLLQTNPRLVYARITGFGQTGP 114
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+S MAGHDINYL LSG+LS+LG R P P N+ ADFGGGGL+ ALGI MAL ER++SG
Sbjct: 115 FSMMAGHDINYLALSGVLSMLGEHGRKPIFPVNVIADFGGGGLLAALGICMALLERTRSG 174
Query: 177 RGQVIDCNMVEG-SAYLGSWLTRTQDTFL----WDKPRGENLLDGGAHFYDTYETKDGRF 231
RGQV+D +M SAYL S+L RT+ + + W RG+N+LDGG HFY+ YETKD ++
Sbjct: 175 RGQVVDTSMASTRSAYLSSFLWRTRSSNMAVPIWIDERGKNILDGGTHFYNVYETKDRKY 234
Query: 232 MAVGALESQFYAQL-LAGLGMTEEELPQH-EVETGRAKLTEKFKEKTQAEWCEIFDNTDA 289
M+VGALE FY +L LG+ + +PQ + E + E F KTQ EWC +FD DA
Sbjct: 235 MSVGALEPNFYKELSWVRLGLEPDTVPQMGDWEESKRVFAEIFATKTQDEWCRVFDQKDA 294
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
CV PVL A HPHN R +F G P PAPRL RTP E P G H+
Sbjct: 295 CVVPVLDHDTAHKHPHNASREAFHECSDGPPIPRPAPRLDRTPAEPDYKE--PLVGEHSV 352
Query: 350 EVLRHFGYSDANIEELIREDVIE 372
EVL+ G SD I L++ +E
Sbjct: 353 EVLKEAGLSDGEIRTLLQSGTVE 375
>gi|37594610|gb|AAQ94259.1| alpha-methyl-acyl-CoA racemase IIAs [Homo sapiens]
Length = 260
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 150/248 (60%), Positives = 196/248 (79%), Gaps = 1/248 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+G +V+E +GLAP PFC M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGTSVVELSGLAPGPFCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ L +SDV+LEPFR+GVMEKLQLGP++L + NPRLIYARLSG+GQ G + +
Sbjct: 60 PRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRL 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++G+GQV
Sbjct: 120 AGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW+ PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAG 248
FY L+ G
Sbjct: 240 FYELLIKG 247
>gi|72160803|ref|YP_288460.1| fatty acid-CoA racemase [Thermobifida fusca YX]
gi|71914535|gb|AAZ54437.1| putative fatty acid-CoA racemase [Thermobifida fusca YX]
Length = 372
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/365 (46%), Positives = 224/365 (61%), Gaps = 11/365 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA---QPFVQ-DTVGYGKKSLCINL 58
L GI V+EFAG+ P P M+L + GA+VIR+D+ G+ P Q + G+ L NL
Sbjct: 4 LSGIRVVEFAGIGPGPMAAMLLADLGASVIRVDRPGSPILAPGAQRPQMSAGRPVLEANL 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K K L+ ++ + +DV+LE FR GVME+L LGPD +NPRL+YAR++G+GQDGP +
Sbjct: 64 KSEKDLARVRAVVAAADVLLEGFRPGVMERLGLGPDECLAANPRLVYARMTGWGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+NY+ L+G L +G R + P PP NL DFGGG + GI+ AL ER +SG+G
Sbjct: 124 RRAGHDMNYISLTGALHSVGRRGQAPVPPVNLVGDFGGGSMFVVTGILAALLERERSGKG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+GSA L S + LW RG N LD GA FYD YE D R++AV LE
Sbjct: 184 QVVDAAMVDGSAVLMSMMYEDLAQGLWRDERGVNYLDTGAPFYDVYECADHRYLAVACLE 243
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKF----KEKTQAEWCEIFDNTDACVTPV 294
QFYA L LG+ ELP +G L E+F + +T+ EW E+F +TDACV+PV
Sbjct: 244 PQFYAVFLDKLGLDPAELPHQWDPSGWPVLRERFADVLRTRTRDEWAEVFADTDACVSPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LS+++A HPH RGS + + V+ P PAPR SRTP S H P P V +VL
Sbjct: 304 LSMTEAADHPHIKARGSLVRD-GDVIYPGPAPRFSRTPARSTRAPHTPTPDVA--QVLAE 360
Query: 355 FGYSD 359
+G D
Sbjct: 361 WGVDD 365
>gi|254481165|ref|ZP_05094410.1| CAIB/BAIF family protein [marine gamma proteobacterium HTCC2148]
gi|214038328|gb|EEB78990.1| CAIB/BAIF family protein [marine gamma proteobacterium HTCC2148]
Length = 377
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/370 (45%), Positives = 236/370 (63%), Gaps = 10/370 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L G TVLE AG+ PAP GMIL + GA VIRID+ G P ++D GKKS+ +NLK
Sbjct: 4 LNGYTVLELAGIGPAPMGGMILADMGAEVIRIDRAGNAPGLHMKDVSTRGKKSVALNLKD 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G+ + + +DV+++PFR GV EKL +GPDV + NP+L++AR++G+GQ+GP +
Sbjct: 64 PAGIETLLRMVENADVVIDPFRPGVCEKLGIGPDVCLERNPKLVFARMTGWGQNGPLAQA 123
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ ++G L +G + P PP NL D GGGG++ G++ AL E + SG+GQV
Sbjct: 124 AGHDINYISITGALYAMGRKGEKPVPPLNLVGDMGGGGMLLVNGVLAALLESANSGKGQV 183
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGE-NLLDGGAHFYDTYETKDGRFMAVGALES 239
ID MV+G+A L + +WD + E NLLDG AHFYD+YE DG ++++G++E
Sbjct: 184 IDAAMVDGAAQLMWMFHGFEAMGMWDASQRESNLLDGAAHFYDSYECADGEYISIGSIEP 243
Query: 240 QFYAQLLAGLGMTEEEL-PQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA L G++EE+ Q+ E + K+TE FK+KTQA+WCEI + TD C PVL
Sbjct: 244 QFYALLKQHAGLSEEDFGDQNNAEKWPEMKTKITEVFKQKTQAQWCEIMEGTDVCFAPVL 303
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+ A SHP NV R ++I GV PAPAPR SRTP S++ A G T +L
Sbjct: 304 NFIDAPSHPANVARNAYI-EVDGVTQPAPAPRFSRTP--SEVRNGGSAAGADTETILAEM 360
Query: 356 GYSDANIEEL 365
G+S+ ++EL
Sbjct: 361 GFSENEVDEL 370
>gi|388568851|ref|ZP_10155261.1| L-carnitine dehydratase/bile acid-inducible protein F
[Hydrogenophaga sp. PBC]
gi|388263918|gb|EIK89498.1| L-carnitine dehydratase/bile acid-inducible protein F
[Hydrogenophaga sp. PBC]
Length = 399
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 232/384 (60%), Gaps = 13/384 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD------TVGYGKKSLCI 56
L GI V+E AG+ P PFC M+L++ GA V+RID+ A + + G++S+ +
Sbjct: 4 LHGIKVVEMAGIGPGPFCAMLLSDMGAEVLRIDRADAVDAASERDPRFEAMNRGRRSIAV 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G + + L +DV++E FR GVME+L LGPD PRLIY R++G+GQ GP
Sbjct: 64 DLKHPEGAATVMRLVASADVLIEGFRPGVMERLGLGPDACLAVRPRLIYGRMTGWGQQGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+ L+G L +G P PP NL DFGGG L A GI AL E +SG
Sbjct: 124 LAQAAGHDINYIALTGALHAIGNGCGKPVPPLNLVGDFGGGALYLAFGIACALLEARQSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+G++ L ++L W RG NLLDGG +YD+YET DGR + +GA
Sbjct: 184 QGQVVDAAIVDGASSLLTFLHGAFARDAWTHERGCNLLDGGRPWYDSYETADGRHICIGA 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+ES+F+ +LL LG+ E+LP+ G R++L FK KT+ EW + + TDAC
Sbjct: 244 IESRFFGELLVRLGLDGEDLPEQNDPAGWTWLRSRLAAVFKGKTRDEWSALLEGTDACFA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL L +A HPHNV R +F+ G+ PAPAPR SRTP +++ P G HTR L
Sbjct: 304 PVLDLHEAQRHPHNVARNTFV-EVDGLAQPAPAPRFSRTP--AQVAGPAPRAGQHTRTAL 360
Query: 353 RHFGYSDANIEELIREDVIEETIE 376
+G++ + + L+ + + IE
Sbjct: 361 EQWGFTASEVGRLLAMGSVVQAIE 384
>gi|4995299|emb|CAB44062.1| 2-methylacyl-CoA racemase [Homo sapiens]
Length = 382
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/380 (46%), Positives = 237/380 (62%), Gaps = 14/380 (3%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL+GI+V+E +GLAP C M+L +FGA V+R+D+ G++ + +G GK+SL ++LK+
Sbjct: 1 MALQGISVVELSGLAPGRXCAMVLADFGARVVRVDRPGSR-YDVSRLGRGKRSLVLDLKQ 59
Query: 61 AKGLSVMKNL--ANQSDVILEPFRKGVMEKLQLGP--DVLCKSNPRLIYARLSGYGQDGP 116
+ ++ + L P G + GP KS L A Q+
Sbjct: 60 PREPRAAASVQAVGCAAGALPPRCHG---ETPAGPRDSAAGKSKAYLCQAEWIWPVQES- 115
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHDINYL LSG+LS +G NP P NL ADF GGGLMCALGI+MALF+R+++
Sbjct: 116 FCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLVADFAGGGLMCALGIIMALFDRTRTD 175
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQVID NMVEG+AYL S+L +TQ + LW+ PRG+N+LDGGA FY TY T DG FMAVGA
Sbjct: 176 KGQVIDANMVEGTAYLSSFLWKTQKSSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGA 235
Query: 237 LESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E QFY L+ GLG+ +ELP + + K + F +KT+AEWC+IFD TDACVT
Sbjct: 236 IEPQFYELLIKGLGLKSDELPNQMSTDDWPEMKKKFADVFAKKTKAEWCQIFDGTDACVT 295
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL+ + H HN RGSFI + V+P AP L TP ++ +P G HT E+L
Sbjct: 296 PVLTFEEVVHHDHNKERGSFITSEEQDVSPRLAPLLLNTPAIPS-SKGDPFIGEHTEEIL 354
Query: 353 RHFGYSDANIEELIREDVIE 372
FG+S I +L + +IE
Sbjct: 355 EEFGFSREEIYQLNSDKIIE 374
>gi|357027038|ref|ZP_09089128.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium amorphae CCNWGS0123]
gi|355541042|gb|EHH10228.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium amorphae CCNWGS0123]
Length = 388
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/382 (44%), Positives = 239/382 (62%), Gaps = 19/382 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-QPFVQ-----DTVGYGKKSLCI 56
L G+ V+E AGL P P G++L+E GA V+RI++ G+ QP + D +G+ L +
Sbjct: 12 LSGLVVIEMAGLGPVPLAGLMLSEMGAEVLRIERAGSGQPLMALPEEYDLDRHGRSILRV 71
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G ++ +LA ++D+++E FR G ME+L LGPD + NP LIY R++G+GQDGP
Sbjct: 72 DLKCPEGAELLLSLAEKADMLIEGFRPGAMERLGLGPDPVLARNPALIYGRMTGFGQDGP 131
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDI YL SG+L +G P PP NL AD+GGG +M G++ ALF+RS+SG
Sbjct: 132 LAGRAGHDITYLAYSGVLHAIGSEEGRPVPPLNLVADYGGGAMMLIAGVLAALFQRSRSG 191
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQVID MVEG++ L + + LW RG NLLD GA FYDTYET DGR +AVG
Sbjct: 192 KGQVIDAAMVEGASMLAAPVHALMAAGLWRDARGVNLLDSGAPFYDTYETDDGRHVAVGC 251
Query: 237 LESQFYAQLLAGLGMTE----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE +F+A+ L + E ++ + A + + K KT+ +W +F +TDACV
Sbjct: 252 LEPRFFAEFARLLPLDEHFVRDQFDKALWPEMSATIAARVKRKTRDDWAALFADTDACVA 311
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVV-APAPAPRLSRTPGT--SKITEHNPAPGVHTR 349
PVLS +A HPHN RG+F+ +AG + PAPAPR S+TP T +K EH+ P +
Sbjct: 312 PVLSFQEAKEHPHNRARGAFV--KAGRLDRPAPAPRFSQTPSTLATKPDEHDLRPVM--- 366
Query: 350 EVLRHFGYSDANIEELIREDVI 371
VLR FG++ +E L++ VI
Sbjct: 367 -VLRRFGFAQGEVEALVKSGVI 387
>gi|333918067|ref|YP_004491648.1| hypothetical protein AS9A_0389 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480288|gb|AEF38848.1| hypothetical protein AS9A_0389 [Amycolicicoccus subflavus DQS3-9A1]
Length = 381
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/368 (47%), Positives = 238/368 (64%), Gaps = 9/368 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E AGLAP PF M+L + GA V+R+++ G + Q + GK ++ ++LK
Sbjct: 5 LHGVRVVEMAGLAPGPFGCMLLADLGAEVLRVERAGGGGGLVPPQGPMDRGKNTIAVDLK 64
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G +V++ LA +DV +E +R GV E+L +GPD L NPRLIY R++G+GQDGP +
Sbjct: 65 SDSGRAVVRELAGNADVFVEGYRPGVAERLGIGPDDLLGINPRLIYGRITGWGQDGPLAP 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY +SG L LLG PTPP N+ ADF GGG++ ALG++ AL ER SG+GQ
Sbjct: 125 RAGHDINYAAISGGLDLLGRAGDPPTPPANILADFAGGGMLLALGVLAALHERQNSGKGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G+A L +++ LW+ PRG NLLDGGA Y TYET DG +MAVGALE
Sbjct: 185 VVDAAMVDGAALLTTFMHGMHANGLWNGPRGTNLLDGGAACYGTYETSDGGYMAVGALEP 244
Query: 240 QFYAQLLAGLGM-TEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+L+A L + +ELP H + E R L E F+++T AEW E+F ++DAC TPV
Sbjct: 245 QFYAELVAKLELENTDELPFHLDLSQAERLREVLAETFRKRTLAEWAEVFADSDACATPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
+S +A HPHN R ++I G+V PAPAPR SRTP + + E+L++
Sbjct: 305 VSAWEAHKHPHNQARQAYI-EVGGLVQPAPAPRFSRTPAAVPSPAGDNGGAEASGEILKN 363
Query: 355 FGYSDANI 362
+G SD+ +
Sbjct: 364 WGLSDSAV 371
>gi|344236201|gb|EGV92304.1| Alpha-methylacyl-CoA racemase [Cricetulus griseus]
Length = 248
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/248 (61%), Positives = 194/248 (78%), Gaps = 1/248 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L+GI V+E AGLAP PFCGM+L +FGA V+R+D+ G++ V + GK+SL ++LK+
Sbjct: 1 MVLRGIRVVELAGLAPGPFCGMVLADFGAQVVRVDRPGSRGDV-SLLARGKRSLVLDLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ + + DV+LEPFR GVMEKLQLGP+ L K NP+LIYARLSG+GQ G +S
Sbjct: 60 PRGAAVLRRICARVDVLLEPFRCGVMEKLQLGPETLLKDNPKLIYARLSGFGQSGSFSKA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSG+LS +G NP PP NL ADF GGGLMC LGIV+ALFER++SG+GQV
Sbjct: 120 AGHDINYVALSGVLSKIGKSGDNPYPPLNLLADFAGGGLMCTLGIVLALFERTRSGQGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW++PRG+NLLDGG+ FY TY+T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQHMGLWEQPRGQNLLDGGSPFYTTYKTADGEFMAVGAIEPQ 239
Query: 241 FYAQLLAG 248
FY L+ G
Sbjct: 240 FYKLLVKG 247
>gi|94314354|ref|YP_587563.1| alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
gi|93358206|gb|ABF12294.1| Alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
Length = 370
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/366 (45%), Positives = 229/366 (62%), Gaps = 18/366 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ------DTVGYGKKSLC 55
+L+G+ V+EFAGL PAPFC M+L + GA V+RI + A P V+ D + G++++
Sbjct: 4 SLEGLNVVEFAGLGPAPFCCMLLADHGADVLRITRPTA-PGVEAKVNPADVLARGRRTIP 62
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L++A G L ++DV++E FR GVME+L LGPDV NPRL+Y R++G+GQ G
Sbjct: 63 LDLREASGRDAALELIARADVVVEGFRPGVMERLGLGPDVCLARNPRLVYGRMTGWGQYG 122
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ +SG L +G P PP NL DFGGGG+M A G++ AL+E +S
Sbjct: 123 PLAQAAGHDINYIAISGALHAIGRAGEAPVPPLNLVGDFGGGGMMLAFGLMAALYEARQS 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQVID M +GSA L + + W+ RGENLLDGGA FYDTY DG+++AVG
Sbjct: 183 GRGQVIDAAMTDGSALLSAMQYGMKAGGRWNNQRGENLLDGGAPFYDTYACADGKYVAVG 242
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDAC 290
A+E QFYA L G+ E+ L ++ET R +L + F+ +T+AEWC + + +DAC
Sbjct: 243 AIEPQFYAALRERCGI-EDPLFDGQMETARWPLLKLRLADIFRTRTRAEWCALLEGSDAC 301
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
PVL +A HPHN R +F+ GVV PA APR SRTP + +E V
Sbjct: 302 FAPVLDWDEAPEHPHNREREAFV-TLQGVVQPAAAPRFSRTPAAAPQSERR----VSLDA 356
Query: 351 VLRHFG 356
L H+G
Sbjct: 357 ALAHWG 362
>gi|386287073|ref|ZP_10064251.1| L-carnitine dehydratase/bile acid-inducible protein F [gamma
proteobacterium BDW918]
gi|385279917|gb|EIF43851.1| L-carnitine dehydratase/bile acid-inducible protein F [gamma
proteobacterium BDW918]
Length = 378
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/378 (43%), Positives = 227/378 (60%), Gaps = 13/378 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQDTVGYGKKSLCINLK 59
L GI ++E GL PAPF GM+ + GA VI I + A P GKKS+ +NLK
Sbjct: 4 LSGIRIIELEGLGPAPFAGMMFADMGAEVISITRKSAAADAPVANIISERGKKSIALNLK 63
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G+ + L +D ++E FR GV E+L +GP+ NP+L++ R++G+GQ GP +
Sbjct: 64 DPRGVEAVLKLCESADALIEGFRPGVAERLGIGPEQCLARNPKLVFGRMTGWGQTGPMAQ 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ LSG L +G P PP NL DFGGGG+ A G+V A+ E S+SG+GQ
Sbjct: 124 AAGHDINYISLSGALHAMGRAGDKPVPPANLVGDFGGGGMFLAFGVVSAILEASRSGKGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +MVEGSA L + + LW RG N+LD GAHFY+TYET D + +++G +E
Sbjct: 184 VVDTSMVEGSAALMHMMYCFYNQNLWKDERGVNMLDTGAHFYETYETSDAKHVSIGPIEP 243
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFY L LG+ E+ +++T R KLTE F KT+ +WCEIF+ +DAC P+
Sbjct: 244 QFYHILKEKLGLDEDSF-GAQMDTSRWPELKQKLTEIFLTKTRDQWCEIFEGSDACFAPI 302
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LS+S+A HPHNV R SFI G + P PAP+ SRT ++ + P PG T VL
Sbjct: 303 LSMSEAPKHPHNVARKSFI-EVEGQIQPGPAPKFSRT--APEVLKGAPRPGSDTESVLAE 359
Query: 355 F-GYSDANIEELIREDVI 371
GY A++ L E V+
Sbjct: 360 LAGYDAASLASLRAEGVL 377
>gi|114798334|ref|YP_760683.1| putative alpha-methylacyl-CoA racemase [Hyphomonas neptunium ATCC
15444]
gi|114738508|gb|ABI76633.1| putative alpha-methylacyl-CoA racemase [Hyphomonas neptunium ATCC
15444]
Length = 365
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/362 (44%), Positives = 227/362 (62%), Gaps = 9/362 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINLKK 60
L G+ ++EFAG+ P PFCGM+L++ GA VIRID+ +G +D VG G++S+ +NLK
Sbjct: 6 LAGVKIVEFAGIGPGPFCGMLLSDMGADVIRIDRPGNGKPGRAEDVVGRGRRSIGLNLKD 65
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ V L Q+D ++E FR GVME+ LGPDV NP+L+Y R++G+GQ G S
Sbjct: 66 PADVEVALKLIAQADALIEGFRPGVMERNGLGPDVALARNPKLVYGRMTGWGQTGALSHS 125
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY+ ++G L +G + P PP NL D+GGG L A+G++ A+ G+GQV
Sbjct: 126 AGHDLNYIAITGALHAMGDGDGRPRPPLNLVGDYGGGALYLAMGVLAAIINVKNGGKGQV 185
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID M +G+A L + + +W R N+LDGGAHFYDTYETKDG+++++G++E Q
Sbjct: 186 IDVAMSDGAASLTAMFWGMRAMGVWTDDREANMLDGGAHFYDTYETKDGKWISLGSIEPQ 245
Query: 241 FYAQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA L G+T + ++ + + + K+ K KTQAEW EI + TD C PVLS
Sbjct: 246 FYAILREKAGLTDAAYDAQMDRSKWPELKKKVMAAIKTKTQAEWNEIMEGTDICYAPVLS 305
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
++ A ++ HNV RG+F+ GVV PAPAPR S TPG I P G HT +L+ +G
Sbjct: 306 MADAPTYKHNVDRGTFV-EIEGVVQPAPAPRFSETPGA--IQGRPPGLGEHTEAILKDWG 362
Query: 357 YS 358
S
Sbjct: 363 VS 364
>gi|271968396|ref|YP_003342592.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270511571|gb|ACZ89849.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 377
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 225/340 (66%), Gaps = 13/340 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDT-----VGYGKKSLCIN 57
L G+ VLE AGLAP PF GM+L + GA V+R+++ DT + GK+++ ++
Sbjct: 10 LAGVRVLELAGLAPGPFAGMMLADHGAEVLRVERVATVAAAGDTPRADVMDRGKRTVGLD 69
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G++ K L +DV++E FR GV E+L +GP L + NPRLIY R++G+GQ+GP
Sbjct: 70 LKSPEGVAAFKELVRSADVVIEVFRPGVAERLGIGPADLHEVNPRLIYGRMTGWGQEGPL 129
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI+Y+ +SG+LS+LG PTPP N+ DF GGGLM A G+++AL ER ++G
Sbjct: 130 APTAGHDIDYIAISGVLSMLGREGDRPTPPINILGDFAGGGLMLAYGVLLALIERERTGE 189
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
G+VID MV+G+A L + + W PRG NLLD GA YDTYET DG+F+AVGAL
Sbjct: 190 GRVIDAAMVDGAATLFAMFYHGVQSGFW-GPRGTNLLDTGAPMYDTYETSDGKFLAVGAL 248
Query: 238 ESQFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QF+ +++ +G+ E+LP + + R +L E F+ +T+AEW +F+ +DACV+P
Sbjct: 249 EPQFWTEMVTLMGL--EDLPDRGDRSQWPALRERLAEAFRSRTRAEWETVFEGSDACVSP 306
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
VL +++A HPHN RG+F+ GV PAPAPRL T G
Sbjct: 307 VLDMAEAAGHPHNRARGAFV-EVGGVRQPAPAPRLLGTAG 345
>gi|354484060|ref|XP_003504209.1| PREDICTED: alpha-methylacyl-CoA racemase-like, partial [Cricetulus
griseus]
Length = 246
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 151/246 (61%), Positives = 193/246 (78%), Gaps = 1/246 (0%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M L+GI V+E AGLAP PFCGM+L +FGA V+R+D+ G++ V + GK+SL ++LK+
Sbjct: 1 MVLRGIRVVELAGLAPGPFCGMVLADFGAQVVRVDRPGSRGDV-SLLARGKRSLVLDLKR 59
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V++ + + DV+LEPFR GVMEKLQLGP+ L K NP+LIYARLSG+GQ G +S
Sbjct: 60 PRGAAVLRRICARVDVLLEPFRCGVMEKLQLGPETLLKDNPKLIYARLSGFGQSGSFSKA 119
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSG+LS +G NP PP NL ADF GGGLMC LGIV+ALFER++SG+GQV
Sbjct: 120 AGHDINYVALSGVLSKIGKSGDNPYPPLNLLADFAGGGLMCTLGIVLALFERTRSGQGQV 179
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID NMVEG+AYL S+L +TQ LW++PRG+NLLDGG+ FY TY+T DG FMAVGA+E Q
Sbjct: 180 IDANMVEGTAYLSSFLWKTQHMGLWEQPRGQNLLDGGSPFYTTYKTADGEFMAVGAIEPQ 239
Query: 241 FYAQLL 246
FY L+
Sbjct: 240 FYKLLV 245
>gi|388566026|ref|ZP_10152503.1| Alpha-methylacyl-CoA racemase [Hydrogenophaga sp. PBC]
gi|388266756|gb|EIK92269.1| Alpha-methylacyl-CoA racemase [Hydrogenophaga sp. PBC]
Length = 389
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/383 (42%), Positives = 234/383 (61%), Gaps = 18/383 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF---VQD------TVGYGKKS 53
L +TV+E AG+ P PF M+L + GATVIR+D+ P ++D V G++S
Sbjct: 5 LAHLTVIELAGIGPGPFACMLLADLGATVIRVDRLPGPPSRGGLEDLMRNDGIVDRGRRS 64
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+ +N+K +G+ + L + +DV++E FR GV EKL LGP+V N RL+Y R++G+GQ
Sbjct: 65 IAVNMKDPRGVEAVLRLVDSADVLIEGFRPGVAEKLGLGPEVCRARNARLVYGRMTGWGQ 124
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP S AGHD+NY+ LSG L +G +R P PP NL D+GGGG++ A+G++ A E
Sbjct: 125 RGPLSQAAGHDLNYIALSGALHAMGPADRPPAPPLNLVGDYGGGGMLLAVGVLAAHAEAQ 184
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
+SG+GQV+D M +G+A L + W R N LDG AHFY TYE DGRF++
Sbjct: 185 RSGQGQVVDAAMTDGAALLMAAQYGLMAKGFWQDRRESNFLDGAAHFYGTYECADGRFVS 244
Query: 234 VGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTD 288
+GA+E QFY QLLA G+ + Q + ++G R++L F+ +T+ +WC + + TD
Sbjct: 245 IGAIEPQFYQQLLALCGIDDPGF-QKQWDSGEWPMLRSQLEALFRTRTRDDWCALLEGTD 303
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
C PVLS+ +A +HPHN RG+F+ GVV PAPAPR RTP +++ P G T
Sbjct: 304 VCFAPVLSMKEAPAHPHNAARGTFV-QADGVVQPAPAPRFDRTP--AQLPPRAPLVGADT 360
Query: 349 REVLRHFGYSDANIEELIREDVI 371
R +L GY+ A+IE L V+
Sbjct: 361 RALLARAGYAVADIEALCAAGVV 383
>gi|257056362|ref|YP_003134194.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora viridis DSM 43017]
gi|256586234|gb|ACU97367.1| predicted acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora viridis DSM 43017]
Length = 358
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/335 (48%), Positives = 217/335 (64%), Gaps = 11/335 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E G+ P P MIL + GA V+RID+ GAQ +D + G++S+ +LK +
Sbjct: 5 LTGLRVVELGGIGPGPHAAMILGDLGADVVRIDRPGAQ--TRDPLLRGRRSVVADLKTDE 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G ++ L ++DV++E +R GV E+L +GP NPRL+Y R++G+GQDGP + AG
Sbjct: 63 GRDLVLRLVAKADVLVEGYRPGVAERLGIGPADCHAVNPRLVYGRMTGWGQDGPLAPRAG 122
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L +G P PP NL DFGGG ++ GI+ AL+ER +SG+GQV+D
Sbjct: 123 HDINYISLTGALHAIGRTGERPVPPLNLVGDFGGGSMLLLTGILSALWERERSGKGQVVD 182
Query: 183 CNMVEGSAYLGS--WLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
MV+G++ L W R Q W RG NLLDGGA FYDTYE DGR+MAVGALE Q
Sbjct: 183 AAMVDGASLLLQMMWAMRGQGA--WSDERGTNLLDGGAPFYDTYECSDGRYMAVGALEPQ 240
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYAQLL GLG+ ELP+ G RA++ E FK + + W ++F +TDACVTPVLS
Sbjct: 241 FYAQLLEGLGLDPAELPEQYDRAGWPVLRARIGEAFKAQPREHWEKVFADTDACVTPVLS 300
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
++A HPH V RG+ I G+ PAPAPR SR+
Sbjct: 301 FAEAAHHPHLVARGT-ITELDGMPQPAPAPRFSRS 334
>gi|389875303|ref|YP_006373038.1| L-carnitine dehydratase/bile acid-inducible protein F [Tistrella
mobilis KA081020-065]
gi|388530258|gb|AFK55454.1| L-carnitine dehydratase/bile acid-inducible protein F [Tistrella
mobilis KA081020-065]
Length = 376
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 167/367 (45%), Positives = 229/367 (62%), Gaps = 11/367 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L+GI V+E AGL P PFC M+L + GA V+RI++ D GK+S+ ++LK
Sbjct: 4 LQGIRVIEIAGLGPGPFCAMLLADLGADVLRIERATGSGLFDPKFDLSNRGKRSVVLDLK 63
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K +G++ + L +D++ E FR GVME+L LGPD+ NP+L+Y R++G+GQ GP +
Sbjct: 64 KPEGVAAVLKLVESADILTEGFRPGVMERLGLGPDICLARNPKLVYGRMTGFGQTGPLAK 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ +SG L +G ++ P PP NL DFGGG L A G++ AL E +SG+GQ
Sbjct: 124 VAGHDINYIAMSGALHAIGGADK-PVPPLNLVGDFGGGALYLAFGLMAALIEAGRSGKGQ 182
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M++G+A L + + WD R NL+DGGAHFYDTYET DG+ +++G++E
Sbjct: 183 VVDATMIDGAASLMTMMYGMAAAGSWDDRRYSNLVDGGAHFYDTYETADGKHVSIGSIEP 242
Query: 240 QFYAQL--LAGLGMTEEELPQHEVETGR--AKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+L LAGL E + E R A+L E FK KT+ EWC + + +D C PVL
Sbjct: 243 QFYAELIRLAGLDPAEFAAQNDKAEWPRMKARLVEVFKTKTRDEWCSLMEGSDVCFAPVL 302
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
S+ +A HPHN RG+FI GVV P PAPR SRT PAPG HT + L +
Sbjct: 303 SMFEAPEHPHNRERGTFI-EVDGVVQPGPAPRFSRT--APDRPTPPPAPGTHTDQGLADW 359
Query: 356 GYSDANI 362
G+S I
Sbjct: 360 GFSADEI 366
>gi|134102804|ref|YP_001108465.1| alpha-methylacyl-CoA racemase [Saccharopolyspora erythraea NRRL
2338]
gi|291005897|ref|ZP_06563870.1| alpha-methylacyl-CoA racemase [Saccharopolyspora erythraea NRRL
2338]
gi|133915427|emb|CAM05540.1| alpha-methylacyl-CoA racemase [Saccharopolyspora erythraea NRRL
2338]
Length = 388
Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 224/354 (63%), Gaps = 23/354 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ--------DTVGYGKKSL 54
L G+ V+E AGL PAPFC M+L + GA V+ +D+ GA V D + GK+S+
Sbjct: 10 LAGVRVVELAGLGPAPFCAMLLADLGADVVLVDRPGAGARVDRPDGSDQTDLLNRGKRSI 69
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK +G + + LA ++DV+LE R GV E+L +GP + NPRL+Y R++G+GQD
Sbjct: 70 AVDLKHERGAAAVLALAERADVLLEGLRPGVAERLGVGPRQCWEVNPRLVYGRMTGWGQD 129
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHDI Y+ L+G+L +G P P NL DFGGG + A+G++ AL E
Sbjct: 130 GPLAPTAGHDIGYIALTGMLHAIGRAGGPPQVPLNLLGDFGGGSMYLAVGVLAALLEARG 189
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
SGRGQV+D ++V+G+A+LG+ + + W RG NLLD GA FYD YET DG MAV
Sbjct: 190 SGRGQVVDASIVDGAAHLGTMIHGMRAAGGWSTTRGTNLLDTGAPFYDVYETADGEHMAV 249
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDAC 290
GALE +FYA+L+ LG E+LP + A+L +F E +T+AEW E+F+ +DAC
Sbjct: 250 GALEPKFYAELVRRLGA--EDLPDRDDPANWAELRRRFAEIFARRTRAEWTEVFEGSDAC 307
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP 344
V PVLS+++A HPH RG+ + R GV+ PAPAPR SRTP NPAP
Sbjct: 308 VAPVLSMAEAPRHPHVAARGTLV-EREGVLQPAPAPRFSRTP--------NPAP 352
>gi|340522413|gb|EGR52646.1| predicted protein [Trichoderma reesei QM6a]
Length = 393
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 165/313 (52%), Positives = 210/313 (67%), Gaps = 13/313 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQPFVQDTVGYGKKSLCIN 57
LKGI VLEFAGLAP PF G++L + GA+V+RIDK GA P D + K SL +N
Sbjct: 7 LKGIKVLEFAGLAPGPFAGLMLADAGASVLRIDKPPSNAEGAVP-SPDLLARHKSSLIVN 65
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G +++K LA DV+++PFR GV+EKL LGPD L +NPRLIY RL+G+ +DG Y
Sbjct: 66 LKNPRGAALIKRLAKHIDVLIDPFRPGVLEKLGLGPDALLAANPRLIYGRLTGFRRDGRY 125
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+SMAGHDINYL SG+L+LLG R P PP N+ ADF GGG M A GI++A+ R+ SG+
Sbjct: 126 ASMAGHDINYLAASGVLALLGRRGEKPFPPWNILADFAGGGAMLAHGILLAIIARASSGK 185
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV++ NMV+GS+YL S+ T + DKPRG N+LD G +YDTYET DG +MAVGAL
Sbjct: 186 GQVVEANMVDGSSYLASFPRIALKTPVGDKPRGSNILDSGCPWYDTYETADGEYMAVGAL 245
Query: 238 ESQFYAQLLAGLGMTEE----ELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDAC 290
E QF+ LL GL + + E +H+ RA TE FK KT+AEW +FD TDAC
Sbjct: 246 EPQFFRALLKGLDLLHDQPGWEDKRHDASLWPRLRALFTETFKRKTRAEWEAVFDGTDAC 305
Query: 291 VTPVLSLSQATSH 303
PVL + S
Sbjct: 306 CVPVLHYRELESQ 318
>gi|312199516|ref|YP_004019577.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
gi|311230852|gb|ADP83707.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
Length = 380
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 159/364 (43%), Positives = 225/364 (61%), Gaps = 14/364 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L G+ V+E AG+ P P M+L + GA V+R+++ P D + G++S+ +
Sbjct: 12 LAGLRVVELAGIGPGPHAAMVLADLGADVVRVERPATGGAIPGAPATGDHLLRGRRSVAL 71
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK A G + L ++DV++E +R GV E+L +GPDV NPRL+Y R++G+GQDGP
Sbjct: 72 DLKDAAGKERLLALVERADVLIEGYRPGVAERLGVGPDVCLGRNPRLVYGRMTGWGQDGP 131
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHD+NY+ ++GIL +G R+ P P NL DFGGG + G++ AL+ER +SG
Sbjct: 132 WAHTAGHDLNYISVTGILHAIGPRDGKPVVPLNLVGDFGGGSMFLLTGVLAALWERERSG 191
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D MV+G++ L + + T W RG N+LDGGA +YDTY DGR +AVGA
Sbjct: 192 AGQVVDAAMVDGASVLAQMMWAWRATGFWSDERGTNVLDGGAPYYDTYVCADGRHVAVGA 251
Query: 237 LESQFYAQLLAGLGMTEE-ELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E QFYA LLAGLG+T++ LP+ G RA+L F +T+ EW +FD TDACV
Sbjct: 252 IEPQFYAALLAGLGLTDDAALPRQNDRAGWPALRARLAATFLTRTRDEWAAVFDGTDACV 311
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
TPVL+ ++AT+HPH RG+ + GV PAPAPR SRT + P G T V
Sbjct: 312 TPVLTFAEATTHPHLTARGTLM-TLDGVQQPAPAPRFSRT--VPAVPSAPPLTGADTDAV 368
Query: 352 LRHF 355
L +
Sbjct: 369 LADW 372
>gi|430804864|ref|ZP_19431979.1| alpha-methylacyl-CoA racemase [Cupriavidus sp. HMR-1]
gi|429502991|gb|ELA01294.1| alpha-methylacyl-CoA racemase [Cupriavidus sp. HMR-1]
Length = 370
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/366 (45%), Positives = 228/366 (62%), Gaps = 18/366 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ------DTVGYGKKSLC 55
+L+G+ V+EFAGL PAPFC M+L + GA V+RI + A P V+ D + G++++
Sbjct: 4 SLEGLKVVEFAGLGPAPFCCMLLADHGADVLRITRPTA-PGVEAKVNPADVLARGRRTIP 62
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L++A G L ++DV++E FR GVME+L LGPDV NPR++Y R++G+GQ G
Sbjct: 63 LDLREASGRDAALELIARADVVVEGFRPGVMERLGLGPDVCLARNPRVVYGRMTGWGQYG 122
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ +SG L +G P PP NL DFGGGG+M A G++ AL+E +S
Sbjct: 123 PLAQAAGHDINYIAISGALHAIGRAGEAPVPPLNLVGDFGGGGMMLAFGLMAALYEARQS 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQVID M +GSA L + + W+ RGENLLDGGA FYDTY DG+++AVG
Sbjct: 183 GHGQVIDAAMTDGSALLSAMQYGMKAGGRWNNQRGENLLDGGAPFYDTYACADGKYVAVG 242
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDAC 290
A+E QFYA L G+ E+ L ++ET R +L + F+ +T+AEWC + + +DAC
Sbjct: 243 AIEPQFYAALRERCGI-EDPLFDGQMETARWPLLKLRLADIFRTRTRAEWCAVLEGSDAC 301
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
PVL +A HPHN R +F+ GVV PA APR SRTP + +E V
Sbjct: 302 FAPVLDWDEAPEHPHNREREAFV-TLQGVVQPAAAPRFSRTPAAAPQSERR----VALDA 356
Query: 351 VLRHFG 356
L H+G
Sbjct: 357 ALAHWG 362
>gi|354614396|ref|ZP_09032263.1| Alpha-methylacyl-CoA racemase [Saccharomonospora paurometabolica
YIM 90007]
gi|353221255|gb|EHB85626.1| Alpha-methylacyl-CoA racemase [Saccharomonospora paurometabolica
YIM 90007]
Length = 380
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/373 (45%), Positives = 230/373 (61%), Gaps = 15/373 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP------FVQDTVGYGKKSLCI 56
L G+ V+E AGLAPAPF +L + GA V+R+D+ A P +D + ++++ +
Sbjct: 6 LSGLRVVELAGLAPAPFACTVLADLGADVVRVDR--AVPGDDVLAMPKDPLLRSRRTIGV 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+ K A+G+ ++ LA Q+DV++E FR GV E++ LGP+ + NP L+Y R++G+GQ GP
Sbjct: 64 DTKTAEGVELVLRLAEQADVLVEGFRPGVAERMGLGPEQVHARNPGLVYGRITGWGQTGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L +G P PP N ADFGGGG+ A+G++ AL+ER SG
Sbjct: 124 LAPSAGHDINYIGLSGALHPVGRAGERPVPPVNFLADFGGGGMYLAMGVLAALYERGSSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +MVEGSA L + L + + LWD RGEN+LDGGA FYDTYET DGR +AVGA
Sbjct: 184 LGQVVDASMVEGSALLTTHLFGLRASGLWDGERGENMLDGGAPFYDTYETADGRHVAVGA 243
Query: 237 LESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F++ L+ LG+ E++P H E RA L E T+ E + TDAC+T
Sbjct: 244 IEGRFWSALVEVLGLDPEQVPVHIDQREWPRLRAMLAEAIGRYTRDELTARAEGTDACLT 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLS +A HPHN RGSF+ G+ PAP P+ RTP H G T EVL
Sbjct: 304 PVLSPWEAAEHPHNRARGSFV-EVDGMTQPAPGPKFDRTPAAEPDPPH--PKGSDTGEVL 360
Query: 353 RHFGYSDANIEEL 365
G A I+ L
Sbjct: 361 SELGLDPAEIDRL 373
>gi|377811891|ref|YP_005044331.1| alpha-methylacyl-CoA racemase [Burkholderia sp. YI23]
gi|357941252|gb|AET94808.1| Alpha-methylacyl-CoA racemase [Burkholderia sp. YI23]
Length = 386
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/372 (44%), Positives = 237/372 (63%), Gaps = 15/372 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFV----QDTVGYGKKSL 54
L G+ VLEF + PAPF M+L + GA V+RID+ A P V ++ +G G++S+
Sbjct: 4 LSGVRVLEFEAIGPAPFGCMLLADMGADVLRIDRPVAAADLGPKVNGKHKNVMGRGRRSI 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LKK + L +++D+++E FR G ME+L LGPD NPRL+Y R++G+GQ
Sbjct: 64 TLDLKKRESADAALELMSKADIVVEGFRPGTMERLGLGPDAALARNPRLVYGRMTGWGQT 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP ++ AGHD+NY+ LSG+LS +G P PP NL D+GGGG++ ALG+V ALF+ +
Sbjct: 124 GPLAARAGHDLNYVALSGVLSGIGRAGEAPVPPLNLVGDYGGGGMLLALGVVAALFDAQR 183
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
G GQV+D M+EG+A LG+ + + W + R NLLDGG +YD+Y T+DG +MAV
Sbjct: 184 GGAGQVVDAAMIEGAAQLGTTVWGLLASGNWRETRESNLLDGGTPWYDSYRTRDGHYMAV 243
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
GA+E++FYA+LL L + +E+LP G R + F +T+ EWC +FD +DAC
Sbjct: 244 GAVEARFYAELLEKLDLADEDLPAQHDRAGWPVLRQRFAAVFAGRTREEWCRVFDGSDAC 303
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
V PVL S+A +HPH+ RGSF+ G+V P PAPR SRTP S+I+ P G RE
Sbjct: 304 VAPVLGFSEAPTHPHHRARGSFV-EFDGIVQPGPAPRFSRTP--SRISRPVPQRGEGGRE 360
Query: 351 VLRHFGYSDANI 362
L +G+ DA I
Sbjct: 361 ALEEWGFDDARI 372
>gi|385682272|ref|ZP_10056200.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis sp. ATCC
39116]
Length = 380
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/379 (43%), Positives = 232/379 (61%), Gaps = 15/379 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP------FVQDTVGYGKKSLCI 56
L G+ V+E AGLAPAPF G +L + GA V+R+D+ A+P D + G++++ +
Sbjct: 5 LAGLKVVELAGLAPAPFAGTLLADLGADVVRVDR--AKPGADVLGVPNDPLTRGRRTIGV 62
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+ K A+G+ V+ LA+++DV +E FR GV E++ LGP+ + NPR++Y R++G+GQDGP
Sbjct: 63 DTKSAEGVEVVLRLADRADVFIEGFRPGVAERMGLGPEDVQGRNPRIVYGRVTGWGQDGP 122
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+S AGHDINYL ++G L +G P PP NL DF GGG++ A GI+ AL ER+ SG
Sbjct: 123 LASAAGHDINYLSVAGALEPIGRAGDRPVPPLNLVGDFAGGGMLLAFGILAALHERTSSG 182
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D MV+G+A L + L + +W RG N+LDGGA FYDTYET DG+++AVGA
Sbjct: 183 RGQVVDAAMVDGAALLMTQLFGMRSAGMWPNERGGNVLDGGAPFYDTYETADGKYVAVGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F+ L+ L + ELP H + R L + T+ E + TDAC+T
Sbjct: 243 IEMRFWGDLVRVLELDPAELPVHLDWNQWPRLREILASAIGKFTRDELVARAEGTDACLT 302
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLS +A +HPHN RG+F+ GVV PAPAPR RTP + H G T +VL
Sbjct: 303 PVLSPWEAAAHPHNAARGTFV-EIGGVVQPAPAPRFDRTPPATPEAPHE--KGADTEDVL 359
Query: 353 RHFGYSDANIEELIREDVI 371
GY + L VI
Sbjct: 360 AELGYDAERVAALRAAGVI 378
>gi|385206542|ref|ZP_10033412.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. Ch1-1]
gi|385186433|gb|EIF35707.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. Ch1-1]
Length = 386
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/378 (45%), Positives = 236/378 (62%), Gaps = 21/378 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----------HGAQPFVQDTVGYGK 51
L GI VLEF + P PF M+L + GA V+RID+ +G + D G G+
Sbjct: 4 LSGIRVLEFEAIGPGPFGAMLLADMGADVLRIDRPLPPQDLGPKTNGKR---ADVTGRGR 60
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
+S+ ++LK+ K + +L +++DV++E FR G ME+L LGP NPRL+Y R++G+
Sbjct: 61 RSVTLDLKQPKAVETALDLISRADVVIEGFRPGTMERLGLGPQAALARNPRLVYGRMTGW 120
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQ GP + AGHD+NY+ LSG+LS +G P PP NL D+GGGG++ ALG+V ALF
Sbjct: 121 GQTGPLAERAGHDLNYIALSGVLSGIGRAGEPPVPPLNLVGDYGGGGMLLALGVVAALFN 180
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
+ G GQV+D M+EG+A LGS + + W + R NLLDGG +YD+Y TKDG +
Sbjct: 181 VQRGGEGQVVDAAMIEGAAQLGSVIWGLLASGNWREERASNLLDGGTPWYDSYRTKDGGY 240
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEK----TQAEWCEIFDNT 287
MAVGA+ES+FYA+LL+ LG+ E LP +G L E+F T+ EWC +F+ +
Sbjct: 241 MAVGAVESRFYAELLSKLGLAEAGLPAQHDRSGWPVLRERFAAAFLTCTRDEWCAVFEGS 300
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH 347
DACV PVLS S+A +HP + RGSF+ AGVV PAPAPR S TP S I + P G H
Sbjct: 301 DACVAPVLSFSEAPAHPQHRARGSFV-EVAGVVQPAPAPRFSATP--SAIAKPAPQRGEH 357
Query: 348 TREVLRHFGYSDANIEEL 365
LR +G+ +A +E +
Sbjct: 358 GLAALRDWGFDEAAVERM 375
>gi|116695685|ref|YP_841261.1| acyl-CoA transferase/carnitine dehydratase [Ralstonia eutropha H16]
gi|113530184|emb|CAJ96531.1| predicted acyl-CoA transferase/carnitine dehydratase [Ralstonia
eutropha H16]
Length = 378
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/342 (45%), Positives = 219/342 (64%), Gaps = 16/342 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH------GAQPFVQDTVGYGKKSLCI 56
LKG+ ++EF + PAPF M+L + GA VIR+ +H G +D + ++ + +
Sbjct: 5 LKGVRIIEFGAIGPAPFACMMLADNGADVIRVARHVPAWRQGIMDASKDVLARSRRVVHL 64
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G+ + LA +D I+E +R GVME+L LGP+VL NPRL+Y R++G+GQDGP
Sbjct: 65 DLKTPEGVREARALARDADGIVEGYRPGVMERLGLGPEVLLADNPRLVYGRMTGWGQDGP 124
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+ L+G L G PTPP NL ADFGGGG++ A G+V A+ +G
Sbjct: 125 LAQRAGHDINYIALAGALHAFGREGGKPTPPANLVADFGGGGMLLAFGMVSAILHARATG 184
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+DC M++G+A L S + + +W RG NLLD G HFY+TYET DG+++A+GA
Sbjct: 185 EGQVVDCAMLDGTALLMSMMWSLRSAGVWRDERGVNLLDTGTHFYETYETSDGKYIAIGA 244
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-------RAKLTEKFKEKTQAEWCEIFDNTDA 289
+E +FYA L LG+ ++ P + + +A+L+ FK +++ EWC IFD TDA
Sbjct: 245 VEPEFYALLRERLGLADD--PDFDRQRDPKAWPDLKARLSTIFKTRSRDEWCRIFDPTDA 302
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
CVTPVLS+S+A HPH RG F GVV P+PAPR SRT
Sbjct: 303 CVTPVLSMSEAPDHPHARARGVFT-TIDGVVQPSPAPRYSRT 343
>gi|384104872|ref|ZP_10005809.1| fatty acid-CoA racemase [Rhodococcus imtechensis RKJ300]
gi|383837652|gb|EID77051.1| fatty acid-CoA racemase [Rhodococcus imtechensis RKJ300]
Length = 396
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/383 (40%), Positives = 233/383 (60%), Gaps = 15/383 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-------GKKSLC 55
L G+ V+E + P PFC M+L + GA VIR+D+ V + G++SL
Sbjct: 14 LSGLKVIEIGSIGPGPFCAMLLADLGADVIRVDRATGSGLVGPNADFRTELLHRGRRSLA 73
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G +V+ +L +D+++E FR GV E+L +GPD NP LIY R++G+GQDG
Sbjct: 74 VDLKHPDGAAVVLSLVADADILIEGFRPGVAERLGIGPDDCAARNPGLIYGRMTGFGQDG 133
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + GHDINY+ LSG LSL+G + + PTPP +L DFGGGG++ A G++ ALFER +S
Sbjct: 134 PLAQHVGHDINYVALSGALSLIGRQGQPPTPPLSLIGDFGGGGMLLAFGLLSALFERQRS 193
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQV+D +MVEG+A L + T W+ RG N++D GA +YD YET DG+++AVG
Sbjct: 194 GLGQVVDASMVEGAALLATPFFGFAQTGTWNPERGTNIVDSGAPYYDAYETADGKWLAVG 253
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACV 291
A+E FYA L+A L + ++LP+ + ++ + F + +T A+W E + C+
Sbjct: 254 AMEPHFYADLVALLDL-PDDLPEQNDRSQWPQMKKIFADAVRGRTLADWLEAGEGLTPCI 312
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
+PVL + +A SHPH+V R +F+ + G+V PAPAPR SRT + + P PG HT E+
Sbjct: 313 SPVLDVDEAPSHPHHVARDAFV-DVDGLVQPAPAPRFSRT--AAAVDRRPPLPGEHTTEI 369
Query: 352 LRHFGYSDANIEELIREDVIEET 374
L +G + +R + E
Sbjct: 370 LTDWGIDPGRAADWLRSGAVREA 392
>gi|402820768|ref|ZP_10870332.1| hypothetical protein IMCC14465_15660 [alpha proteobacterium
IMCC14465]
gi|402510414|gb|EJW20679.1| hypothetical protein IMCC14465_15660 [alpha proteobacterium
IMCC14465]
Length = 375
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/374 (43%), Positives = 228/374 (60%), Gaps = 9/374 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP-FVQDTVGYGKKSLCINLKKA 61
L G+ ++EF G+ P PF M+L + GA V+ I + G + + D G+KS+ +++K
Sbjct: 6 LNGLRIIEFVGIGPGPFASMLLTDMGAEVLSIYRKGTEKNALSDIASRGRKSITLDVKTP 65
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G + + L +D ++E FR GVME+L LGPD N +L+Y R++G+GQ GP S A
Sbjct: 66 AGQAAVMRLVAAADGLIEGFRPGVMERLGLGPDDCLAINKKLVYGRMTGWGQTGPLSHAA 125
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G L+ +G NR P PP NL DFGGG + A+G+ A FE +SG GQVI
Sbjct: 126 GHDINYIALTGALAAIGSSNR-PIPPLNLVGDFGGGAMFLAMGMCAAFFEAERSGEGQVI 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
DC M +GSA L ++ L+ R N+LDGGAH+Y+TYET DG+F+++G++E QF
Sbjct: 185 DCAMTDGSASLMTFFFNFMAQGLYKPQRESNMLDGGAHYYNTYETLDGKFISIGSIEPQF 244
Query: 242 YAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA+L LG+T+++ QHE E + KL FK KT+ EW E TD C PVL+L
Sbjct: 245 YAELRDRLGLTDKDFDHQHESEKWPDLKNKLAAVFKTKTRDEWDESLSGTDVCYAPVLTL 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
+A SHPHN R + I R GVV P APR SRTPG I PG H L+ +G+
Sbjct: 305 DEAISHPHNKDRETLI-ERDGVVQPNVAPRFSRTPGA--IQGAPVTPGQHNDTALQGWGF 361
Query: 358 SDANIEELIREDVI 371
+D +E L + ++
Sbjct: 362 TDDEVEALKSDKIV 375
>gi|296141121|ref|YP_003648364.1| bile acid-inducible L-carnitine dehydratase protein F [Tsukamurella
paurometabola DSM 20162]
gi|296029255|gb|ADG80025.1| L-carnitine dehydratase/bile acid-inducible protein F [Tsukamurella
paurometabola DSM 20162]
Length = 364
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/346 (45%), Positives = 223/346 (64%), Gaps = 19/346 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-------QPFVQDTVGYGKKSLC 55
L G+ V+EFAGL PAP M+L + GA V+ + + G +P V G+ +
Sbjct: 9 LAGLKVIEFAGLGPAPHAAMLLADQGADVVSVQRPGVGVAGLTGKP---QMVKRGRTIVE 65
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+LK ++ + L +++DVI+E FR GVME+L LGPDV+ + NPR+++AR++G+GQ+G
Sbjct: 66 ADLKNPTDIAQILELIDRADVIVEGFRPGVMERLGLGPDVVLERNPRIVFARMTGWGQEG 125
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P++ AGHD+NY+ L+G+L +G + P PP NL DF GG + G++ AL+ER+ S
Sbjct: 126 PFAQRAGHDMNYISLTGLLHAIGRQGERPVPPLNLVGDFAGGSMFLVFGVLAALYERNTS 185
Query: 176 GRGQVIDCNMVEGSAYLGS--WLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
G+GQVID MV+G++ +G W R Q +W RG N LDGGA FYDTYET DG++++
Sbjct: 186 GKGQVIDVAMVDGASLIGQMQWDFRGQG--IWSDERGVNTLDGGAPFYDTYETSDGKYVS 243
Query: 234 VGALESQFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDA 289
VGA+E QF+A+LLA LG+ +E+LP Q RA L K KT+ EW EIF ++DA
Sbjct: 244 VGAIEPQFFAELLAKLGLKQEDLPYQLDQARWPELRAALEAALKTKTRDEWAEIFFDSDA 303
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
CV P+L+ +A HPH R + +P GV APAPAPR SRTP +
Sbjct: 304 CVAPILTFEEAPKHPHMAARNN-LPEVGGVTAPAPAPRFSRTPAAA 348
>gi|91777404|ref|YP_552612.1| alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
gi|91690064|gb|ABE33262.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
Length = 389
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/378 (45%), Positives = 235/378 (62%), Gaps = 21/378 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----------HGAQPFVQDTVGYGK 51
L GI VLEF + P PF M+L + GA V+RID+ +G + D G G+
Sbjct: 4 LSGIRVLEFEAIGPGPFGAMLLADMGADVLRIDRPLPPQDLGPKTNGKR---ADVTGRGR 60
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
+S+ +LK+ + + +L +++DV++E FR G ME+L LGP NPRL+Y R++G+
Sbjct: 61 RSVTFDLKQPQAVEAALDLMSRADVVIEGFRPGTMERLGLGPQAALARNPRLVYGRMTGW 120
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQ GP + AGHD+NY+ LSG+LS +G P PP NL D+GGGG++ ALG+V ALF
Sbjct: 121 GQTGPLAERAGHDLNYIALSGVLSGIGRAGEPPVPPLNLVGDYGGGGMLLALGVVAALFN 180
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
+ G GQV+D M+EG+A LGS + + W + R NLLDGG +YD+Y TKDG +
Sbjct: 181 VQRGGEGQVVDAAMIEGAAQLGSVIWGLLASGNWREERASNLLDGGTPWYDSYRTKDGGY 240
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNT 287
MAVGA+ES+FYA+LLA LG+ E LP +G L E+F +T+ EWC +F+ +
Sbjct: 241 MAVGAVESRFYAELLAKLGLAEAGLPGQHDRSGWPVLRERFAAAFLTRTRDEWCAVFEGS 300
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH 347
DACV PVLS S+A +HP + RGSF+ AGVV PAPAPR S TP T I + P G H
Sbjct: 301 DACVAPVLSFSEAPAHPQHRARGSFV-EVAGVVQPAPAPRFSATPST--IAKPAPQRGEH 357
Query: 348 TREVLRHFGYSDANIEEL 365
LR +G+ A +E +
Sbjct: 358 GLAALRDWGFDAAAVERM 375
>gi|383764629|ref|YP_005443611.1| putative fatty acid-CoA racemase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384897|dbj|BAM01714.1| putative fatty acid-CoA racemase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 382
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/384 (44%), Positives = 232/384 (60%), Gaps = 20/384 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----------PFVQDTVGYGKK 52
L + ++EFAG+ P PF M+ + GATV+RI++ GA PF D V G+
Sbjct: 5 LHDLKIIEFAGIGPGPFAAMLFADMGATVVRIERKGATRRPLSPLNLGPF--DVVSRGRL 62
Query: 53 SLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYG 112
S+ +++K+ G L Q+D ++E FR GVME+L LGP+ NP+L+Y R++G+G
Sbjct: 63 SVALDIKRPAGRDAALRLIEQADALIEGFRPGVMERLGLGPESCLARNPKLVYGRMTGWG 122
Query: 113 QDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
Q GP + AGHDINY+ LSG L +G P PP NL DFGGG +M A G++ AL+E
Sbjct: 123 QTGPLAHAAGHDINYIALSGALHAIG-TAEQPLPPLNLVGDFGGGAMMLAWGMIAALWEA 181
Query: 173 SKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFM 232
+SG+GQV+D M +G+AYL + + + LW R NLLDGGA FY TYE DG+F+
Sbjct: 182 QRSGQGQVVDAAMTDGAAYLMAMIYGVKAASLWSNQRQANLLDGGAFFYTTYECSDGKFV 241
Query: 233 AVGALESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTD 288
AVG +E FYA L +G+ + EL Q ++ RAKL F+ +T+ EWC + + TD
Sbjct: 242 AVGPIEPHFYALFLEKIGIDDPELADQFDLSAWPQQRAKLAAVFRTRTRDEWCALLEGTD 301
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
ACV PVL L +A HPHN R +F+ GVV PAPAPRLSRT ++ PAPG T
Sbjct: 302 ACVAPVLDLDEAPLHPHNQARKTFV-EVDGVVQPAPAPRLSRT--PARAPTPPPAPGADT 358
Query: 349 REVLRHFGYSDANIEELIREDVIE 372
VLR +G+ DA I L + IE
Sbjct: 359 ESVLRDWGFDDAEIAALRADGAIE 382
>gi|300785725|ref|YP_003766016.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei U32]
gi|384149034|ref|YP_005531850.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|399537609|ref|YP_006550271.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|299795239|gb|ADJ45614.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei U32]
gi|340527188|gb|AEK42393.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|398318379|gb|AFO77326.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
Length = 382
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/377 (45%), Positives = 226/377 (59%), Gaps = 12/377 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH----GAQPFVQDTVGYGKKSLCINL 58
L GI VLE A L PAP+ M+L + GA V+R+D+ P + + G++S+ ++L
Sbjct: 5 LDGIRVLEIAALGPAPYAAMMLADMGADVLRVDRPVSTLAGDP-AKAVLNRGRRSVVVDL 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + LA ++DV++E FR GVME+L LGP+V NPRL+Y R++G+GQ GP +
Sbjct: 64 KAPGGADAVLRLAERADVLVEGFRPGVMERLGLGPEVCLDRNPRLVYGRMTGWGQHGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+NYL LSG L L R + P P L ADFGGGGLM A G+V AL ERS+SG G
Sbjct: 124 PAAGHDLNYLALSGALRLFSRRGQLPATPPGLVADFGGGGLMLAFGVVCALLERSRSGLG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
Q ID M++G A L + + W G N DGG+ Y+ +ET DGRF+AV A E
Sbjct: 184 QAIDAAMIDGVASLTAMVHGFLAQDRWVDEVGVNFSDGGSPHYEVHETADGRFVAVAAAE 243
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPV 294
+FYA+ L LG+ E+P + R L E + +T+ EW + FD TDACVTPV
Sbjct: 244 PRFYAEFLERLGLDPREVPDRDDPAQRPALRELIAGVLRTRTRDEWEKEFDGTDACVTPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL++AT+HPHN R F GVV PAPAPRL+RTPG I P PG + E L
Sbjct: 304 LSLTEATTHPHNQAREVFT-TAFGVVQPAPAPRLARTPGA--IAGPPPRPGQGSEEALLD 360
Query: 355 FGYSDANIEELIREDVI 371
+G S A I L + V+
Sbjct: 361 WGLSAAEIARLRADGVV 377
>gi|189209762|ref|XP_001941213.1| alpha-methylacyl-CoA racemase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977306|gb|EDU43932.1| alpha-methylacyl-CoA racemase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 396
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 158/307 (51%), Positives = 210/307 (68%), Gaps = 7/307 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L I VLEFAGLAP PF GM+L ++GATV+R+D+ A P D + K S+C+NLK
Sbjct: 9 LADICVLEFAGLAPGPFAGMLLADYGATVLRLDRAPAAP-TSDQLTRRKTSICVNLKSPA 67
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSMA 121
GL+++K L + DVI++PFR GV+EK L P+ VL K NPRLI AR++G+ +DG YS MA
Sbjct: 68 GLALIKKLIPKVDVIIDPFRPGVLEKAGLDPETVLLKLNPRLIVARMTGFRRDGKYSKMA 127
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ +SG+LS+ G + P PP N+ DF GGG MC LGI++AL R +SG GQV+
Sbjct: 128 GHDINYIAVSGVLSMFGRKGEKPYPPGNVVGDFAGGGAMCVLGILLALLARERSGFGQVV 187
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
+ NMV+GSA L + T +W RG N+LDGGA FYDTYETKDG +MAVGA+E QF
Sbjct: 188 EANMVDGSAILATMPRLGTKTAVWKGERGTNMLDGGAPFYDTYETKDGGYMAVGAIEPQF 247
Query: 242 YAQLLAGLGMTEEELP-QHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVLS 296
+A LL G+G+ E+LP E + +L E +F+++T+ EW E+FD TDAC TPV +
Sbjct: 248 WAALLRGMGLKAEDLPGSREDKADWPRLKEFFASEFRKRTRGEWEEVFDGTDACCTPVFT 307
Query: 297 LSQATSH 303
+ S
Sbjct: 308 QADLESQ 314
>gi|212535278|ref|XP_002147795.1| isopenicillin N-CoA epimerase, putative [Talaromyces marneffei ATCC
18224]
gi|210070194|gb|EEA24284.1| isopenicillin N-CoA epimerase, putative [Talaromyces marneffei ATCC
18224]
Length = 383
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 157/305 (51%), Positives = 213/305 (69%), Gaps = 8/305 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF--VQDTVGYGKKSLCINLKK 60
L GI V+E AGLAP PF G++L ++GA+V+RID+ + D + K S+C++LK
Sbjct: 7 LHGIKVVELAGLAPGPFAGLLLADYGASVLRIDRAPNKSISPAGDPLTRHKSSICMDLKD 66
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSS 119
A+ ++ ++ Q+DV+++PFR GV+E+L L P DVL K NPRLI AR++G+ +DG Y
Sbjct: 67 ARSRELLLSILLQADVLIDPFRPGVLERLGLSPSDVLLKHNPRLIIARMTGFRRDGKYKD 126
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINY+ +SG+LS+LG P P NL DF GGG MC LGI++AL RS +G+GQ
Sbjct: 127 MAGHDINYIAVSGVLSMLGRSGETPFAPGNLLGDFAGGGAMCFLGILLALISRSATGKGQ 186
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALE 238
V++ NMV+GSAYL + ++ T +W +PRG NLLDGG +YDTYETKD G++ AVGALE
Sbjct: 187 VVEANMVDGSAYLATMPRLSRKTPVWSEPRGTNLLDGGCPYYDTYETKDKGKYFAVGALE 246
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA LL GLG + +++P E R T++FKEKT+AEW EIFD TDAC TPV
Sbjct: 247 PQFYAALLKGLGFSGKDVPPREDRDNWSALRKIFTQRFKEKTRAEWEEIFDGTDACATPV 306
Query: 295 LSLSQ 299
L ++
Sbjct: 307 LEQAE 311
>gi|443288510|ref|ZP_21027604.1| Putative alpha-methylacyl-CoA racemase [Micromonospora lupini str.
Lupac 08]
gi|385888467|emb|CCH15678.1| Putative alpha-methylacyl-CoA racemase [Micromonospora lupini str.
Lupac 08]
Length = 373
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 164/340 (48%), Positives = 217/340 (63%), Gaps = 12/340 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG---AQPFVQDTVG---YGKKSLCI 56
L G+ V+E A LAPAPF M+L + GA V+R+D+ G A T G ++ +
Sbjct: 9 LAGVRVVELASLAPAPFGCMVLADLGADVVRVDRPGGPGAGRLAAPTGGPLQRSRRVTAL 68
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK G++ + L ++DV++E +R GV E+L GPDV NPRL+YAR++G+GQDGP
Sbjct: 69 DLKSPDGVADLLRLVERADVLVEAYRPGVAERLGFGPDVCRAHNPRLVYARMTGWGQDGP 128
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHDI+Y+ ++G L LG P P NL DF GGGL+ A+G++ AL ER +SG
Sbjct: 129 LAARAGHDIDYIAVAGALEPLGRPGARPHAPLNLIGDFAGGGLVLAVGVLAALLERERSG 188
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D MV+GSA L S+L T LW RG NLLDGGA FYDTY T DG FMAVGA
Sbjct: 189 LGQVVDAAMVDGSALLTSFLHGLLGTGLWAASRGRNLLDGGAPFYDTYATADGGFMAVGA 248
Query: 237 LESQFYAQLLAGLGMTEE-ELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE FYA LLAGLG+ ++ LP +G R + TE+F E+T+ EW +F + DACV
Sbjct: 249 LEPAFYAVLLAGLGLADDAHLPDQYDPSGWDELRRRFTERFAERTRDEWTAVFADLDACV 308
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL+ +A HPHN RG+F+ G + PAPAPR RT
Sbjct: 309 APVLAPGEAHRHPHNAARGTFV-EVDGEIQPAPAPRFDRT 347
>gi|397732286|ref|ZP_10499021.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
gi|396931860|gb|EJI99034.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
Length = 396
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 233/382 (60%), Gaps = 13/382 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-------GKKSLC 55
L G+ V+E + P PFC M+L + GA VIR+D+ V + G++SL
Sbjct: 14 LSGLKVVEIGSIGPGPFCAMLLADLGADVIRVDRAVGAGLVGPNADFRAELLHRGRRSLA 73
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK +G V+ +L +DV++E FR GV E+L +GPD NP LIY R++G+GQDG
Sbjct: 74 VDLKHPEGAEVVLSLVEDADVLIEGFRPGVAERLGIGPDDCAARNPGLIYGRMTGFGQDG 133
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + GHDINY+ LSG LS++G + + PTPP +L DFGGGG++ ALGIV ALFE+ +S
Sbjct: 134 PLAQHVGHDINYVALSGSLSMIGRQGQPPTPPLSLIGDFGGGGMVLALGIVSALFEKQRS 193
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQVID +MVEG+A L + T +W+ RG NL+D GA +YD YET DG+++AVG
Sbjct: 194 GLGQVIDASMVEGAALLATPFFGFAQTGVWNGERGTNLVDSGAPYYDAYETADGKWLAVG 253
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
ALE FYA L+A L + ++ Q++ + + + +T A+W + C+
Sbjct: 254 ALEPHFYADLVALLDLPDDLPDQNDRSQWPQMKKIFADAVRGRTLADWLNAAEGLTPCIA 313
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL + +A +HPHNV RG+F+ G+V PAPAPR SRT + + PAPG HT E+L
Sbjct: 314 PVLDVDEAPAHPHNVARGTFV-EVDGLVQPAPAPRFSRT--AAAVDRRPPAPGEHTTEIL 370
Query: 353 RHFGYSDANIEELIREDVIEET 374
+G + + + +R + E
Sbjct: 371 TDWGIASGRVADWLRSGAVREA 392
>gi|330914243|ref|XP_003296556.1| hypothetical protein PTT_06688 [Pyrenophora teres f. teres 0-1]
gi|311331246|gb|EFQ95356.1| hypothetical protein PTT_06688 [Pyrenophora teres f. teres 0-1]
Length = 396
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 158/307 (51%), Positives = 208/307 (67%), Gaps = 7/307 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L I VLEFAGLAP PF GM+L ++GA V+R+D+ A P D + K S+C+NLK
Sbjct: 9 LTDICVLEFAGLAPGPFAGMLLADYGANVLRLDRAPATP-TSDQLTRRKTSICVNLKSPA 67
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSMA 121
GL+++K L DVI++PFR GV+EK L P+ VL K NPRLI AR++G+ +DG YS MA
Sbjct: 68 GLALIKKLVPNVDVIIDPFRPGVLEKAGLDPETVLLKLNPRLIVARMTGFRRDGKYSQMA 127
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ +SG+LS+ G + P PP N+ DF GGG MC LGI++AL R +SG GQV+
Sbjct: 128 GHDINYIAVSGVLSMFGRKGEKPYPPGNVVGDFAGGGAMCVLGILLALLARERSGFGQVV 187
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
+ NMV+GSA L + T +W RG N+LDGGA FYDTYETKDG FMAVGA+E QF
Sbjct: 188 EANMVDGSAMLATMPRLGTKTAVWKGERGTNILDGGAPFYDTYETKDGEFMAVGAIEPQF 247
Query: 242 YAQLLAGLGMTEEELP-QHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVLS 296
+A LL G+G+ E+LP E + +L E +FK++T+ EW ++FD TDAC TPV +
Sbjct: 248 WAALLRGMGLKAEDLPGSREDKADWPRLKEFFASEFKKRTRGEWEKVFDGTDACCTPVFT 307
Query: 297 LSQATSH 303
+ S
Sbjct: 308 QADLESQ 314
>gi|169776537|ref|XP_001822735.1| alpha-methylacyl-CoA racemase [Aspergillus oryzae RIB40]
gi|238503243|ref|XP_002382855.1| isopenicillin N-CoA epimerase, putative [Aspergillus flavus
NRRL3357]
gi|83771470|dbj|BAE61602.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691665|gb|EED48013.1| isopenicillin N-CoA epimerase, putative [Aspergillus flavus
NRRL3357]
Length = 381
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 154/299 (51%), Positives = 209/299 (69%), Gaps = 8/299 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E AGLAP PF G++L ++GA+V+RID+ A D + K S+ ++L+ A
Sbjct: 6 LAGIRVVELAGLAPGPFAGLLLADYGASVLRIDRPNA--VSSDQLTRRKSSITLDLRNAA 63
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSSMA 121
SV+ ++ ++D++++P+R GV+E+L L P +VL K NPRLI AR++G+ +DG Y MA
Sbjct: 64 SHSVLLSVLAKADILIDPYRPGVLERLGLSPSEVLLKYNPRLIVARMTGFRRDGKYKDMA 123
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ +SG+LS+LG P P N+ DF GGG MC +GI++AL R+++GRGQV+
Sbjct: 124 GHDINYIAVSGVLSMLGRAGEPPYAPGNIIGDFAGGGAMCFMGILLALLSRTRTGRGQVV 183
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQ 240
+ NMV+GSAYL + + T LW PRG+N+LDGG+ FYDTYETKD G++ AVGALE Q
Sbjct: 184 EANMVDGSAYLAAMPRLNRQTPLWSGPRGQNMLDGGSPFYDTYETKDKGKYFAVGALEPQ 243
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA LL GLG EELP + RA ++FKEKT+AEW IFD TDAC TPVL
Sbjct: 244 FYAALLKGLGFGSEELPSRDDRENWPVLRAAFAKRFKEKTRAEWESIFDGTDACATPVL 302
>gi|87200061|ref|YP_497318.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium aromaticivorans DSM 12444]
gi|87135742|gb|ABD26484.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium aromaticivorans DSM 12444]
Length = 355
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 222/359 (61%), Gaps = 19/359 (5%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-----QDTVGYGKKSLCI 56
AL G+TVLEFAG+ P PF M+L + GA VIRID+ V +D + ++ L +
Sbjct: 4 ALDGLTVLEFAGIGPGPFACMMLADHGARVIRIDRPSKGDRVGDSGNRDILNRNRERLEL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK ++ ++ L Q+D I+E +R GVME+L LGPDVL NP L+Y R++G+GQ+GP
Sbjct: 64 DLKDPASIARIRELVKQADAIVEGYRPGVMERLGLGPDVLLADNPGLVYGRMTGWGQEGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHDINY+ L+G L G P P NL DFGGGG++ A G++ A+F ++G
Sbjct: 124 MAPLAGHDINYIALAGALHSFGQAGGKPQFPVNLVGDFGGGGMLMAFGVMAAVFSAQRTG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+DC MV+G+A L + W RG NLLDGGAHFYDTYET DG+++++G+
Sbjct: 184 KGQVVDCAMVDGAAILSAMTYTFLGNGRWKDERGVNLLDGGAHFYDTYETSDGKWISIGS 243
Query: 237 LESQFYAQLLAGLGMTE--EELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E QFYA LL G+T+ E PQ + + +L F +T+ EWC I D TD C
Sbjct: 244 IEPQFYALLLEKTGLTDDPEFAPQMDPRVWPRLKDRLAALFLTRTRDEWCAIMDGTDICF 303
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
PVLSL +A HPHNV RG+F+ + G+V PAPAPR TP P P + RE
Sbjct: 304 APVLSLREAPRHPHNVARGTFVED-GGMVMPAPAPRFLGTPA--------PQPSLAARE 353
>gi|391873900|gb|EIT82900.1| putative L-carnitine dehydratase/alpha-methylacyl-CoA racemase
[Aspergillus oryzae 3.042]
Length = 381
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 154/299 (51%), Positives = 209/299 (69%), Gaps = 8/299 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E AGLAP PF G++L ++GA+V+RID+ A D + K S+ ++L+ A
Sbjct: 6 LAGIRVVELAGLAPGPFAGLLLADYGASVLRIDRPNA--VSSDQLTRRKSSITLDLRNAA 63
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSSMA 121
SV+ ++ ++D++++P+R GV+E+L L P +VL K NPRLI AR++G+ +DG Y MA
Sbjct: 64 SHSVLLSVLAKADILIDPYRPGVLERLGLSPSEVLLKYNPRLIVARMTGFRRDGKYKDMA 123
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ +SG+LS+LG P P N+ DF GGG MC +GI++AL R+++GRGQV+
Sbjct: 124 GHDINYIAVSGVLSMLGRAGEPPYAPGNIIGDFAGGGAMCFMGILLALLSRTRTGRGQVV 183
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQ 240
+ NMV+GSAYL + + T LW PRG+N+LDGG+ FYDTYETKD G++ AVGALE Q
Sbjct: 184 EANMVDGSAYLAAMPRLNRQTPLWSGPRGQNMLDGGSPFYDTYETKDKGKYFAVGALEPQ 243
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA LL GLG EELP + RA ++FKEKT+AEW IFD TDAC TPVL
Sbjct: 244 FYAALLKGLGFGSEELPSRDDRENWPVLRAAFAKRFKEKTRAEWESIFDGTDACATPVL 302
>gi|302525613|ref|ZP_07277955.1| alpha-methylacyl-CoA racemase [Streptomyces sp. AA4]
gi|302434508|gb|EFL06324.1| alpha-methylacyl-CoA racemase [Streptomyces sp. AA4]
Length = 380
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 238/373 (63%), Gaps = 15/373 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP------FVQDTVGYGKKSLCI 56
L G+ V+E AGLAPAPF MIL + GA VIR+D+ A P D + G++S+ +
Sbjct: 6 LAGLRVVELAGLAPAPFACMILADLGADVIRVDR--ATPGSDVLGIPNDPLARGRRSVGV 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
N K +G+ ++ LA ++DV++E FR GV E++ +GP+ + NPRL+Y R++G+GQDGP
Sbjct: 64 NTKTPEGVELVLKLAERADVLIEGFRPGVAERMGIGPEQVHARNPRLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+S AGHDINY+G++G L +G P PP NL DFGGGGLM A+G++ AL ER+ SG
Sbjct: 124 LASAAGHDINYIGVAGALDPIGRAGERPVPPLNLVGDFGGGGLMLAMGVLAALHERTTSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D +MVEG+A L + L + +W RGENLLDGGA FYDTYET DG+++A+GA
Sbjct: 184 RGQVVDASMVEGTALLTTSLHGMRAAGVWPGERGENLLDGGAPFYDTYETSDGKYVAIGA 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEK----TQAEWCEIFDNTDACVT 292
+E +F+A L+ LG+ E+LP H ++ +L + +E T+ E + TDAC+T
Sbjct: 244 IEMRFWADLVKVLGLENEDLPMHVDQSQWPRLRKILEEAVGRFTRDELVARAEGTDACLT 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
VLS +A HP N RG+F+ + G V PAPAPR RTP + H G T EVL
Sbjct: 304 AVLSPWEAAEHPQNAARGTFV-DIGGTVQPAPAPRFDRTPAATPEAPHE--KGSDTAEVL 360
Query: 353 RHFGYSDANIEEL 365
GY DA + L
Sbjct: 361 AELGYDDAGVAAL 373
>gi|103486729|ref|YP_616290.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingopyxis
alaskensis RB2256]
gi|98976806|gb|ABF52957.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingopyxis
alaskensis RB2256]
Length = 376
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 216/368 (58%), Gaps = 8/368 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI ++EFAG+ P PFC M+L + GA VIRID+ +D + + S+ +++KK
Sbjct: 5 LHGIKIIEFAGIGPGPFCAMMLADHGAEVIRIDRPDGFLDPRDPLSRNRTSIALDMKKPD 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ + ++L +D I+E +R GVME+L LGPDVL NPRL+Y R++G+GQ GPYS AG
Sbjct: 65 AVQIARDLCRGADAIIEGYRPGVMERLGLGPDVLLADNPRLVYGRMTGWGQYGPYSQAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ LSG+L +G P PP N DFGGGG+M A G+ AL +++G GQVID
Sbjct: 125 HDINYIALSGVLHGIGRAGEKPVPPVNYVGDFGGGGMMLAFGMTSALLHAARTGEGQVID 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
C M +GSA L + G N+LDGGAHFYDTY DG+F+++G++E QFY
Sbjct: 185 CAMTDGSALLAGMTWGFKAMGRLKDEAGVNMLDGGAHFYDTYRCADGKFISIGSIEPQFY 244
Query: 243 AQLL--AGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A L GL + QH+ + KLT F KT+ EWC I + TD C PVLSL
Sbjct: 245 ALLRQKTGLDADPDFDAQHDPSKWGPLKDKLTALFATKTRDEWCAIMEMTDICFAPVLSL 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
+A HPHNV R +FI + G + PAPAPR S T ++ P G VL GY
Sbjct: 305 EEAPQHPHNVARETFI-DIGGAIQPAPAPRYSVT--SNDTPRAAPTVGADGDAVLAALGY 361
Query: 358 SDANIEEL 365
I L
Sbjct: 362 DAGRIAAL 369
>gi|84687008|ref|ZP_01014891.1| putative racemase [Maritimibacter alkaliphilus HTCC2654]
gi|84664982|gb|EAQ11463.1| putative racemase [Rhodobacterales bacterium HTCC2654]
Length = 375
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/367 (44%), Positives = 222/367 (60%), Gaps = 7/367 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
LKG++V+E GL PAP G L + GA V+ + + D GK+S+ +NLK +
Sbjct: 5 LKGLSVVEMQGLGPAPLAGQFLADLGAEVVLVTRKSGPVDKTDINNRGKRSVALNLKSPE 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G++ L +DV++E FR GVME++ LGP+ NP+L++AR++G+GQDGP + AG
Sbjct: 65 GVAAALALIEAADVLIEGFRPGVMERMGLGPEACHAVNPKLVFARMTGWGQDGPLAMTAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYLGL+G L G +R+P PP N+ AD+GGG + GI+ AL+ER SG GQV+D
Sbjct: 125 HDINYLGLTGFLHATGEADRSPPPPLNIGADYGGGTMFLLFGIMAALYERQTSGEGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G++ + + + W + R NLLDGGA FY TYE DG+FMAVG LE QF+
Sbjct: 185 AAMVDGASAMMALIHTFIARGHWSEDRQANLLDGGAPFYRTYECADGKFMAVGPLEPQFH 244
Query: 243 AQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A+L+ G+ E+ L + R FK+KT+ EW IFD +DACVTPV++ S
Sbjct: 245 AELVRLAGLPEDHLATQMSAKDWPDRRDAYAGVFKQKTRDEWAAIFDGSDACVTPVMTWS 304
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
+A +HPH RG+F GV APAPR SR+ T PAPG T VLR GY
Sbjct: 305 EAPTHPHMAARGTFT-EVGGVTQAAPAPRFSRS--TPDNVAAPPAPGSDTVAVLRGLGYD 361
Query: 359 DANIEEL 365
DA I L
Sbjct: 362 DAEIARL 368
>gi|220914769|ref|YP_002490077.1| L-carnitine dehydratase/bile acid-inducible protein F
[Methylobacterium nodulans ORS 2060]
gi|219952520|gb|ACL62910.1| L-carnitine dehydratase/bile acid-inducible protein F
[Methylobacterium nodulans ORS 2060]
Length = 389
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/342 (45%), Positives = 211/342 (61%), Gaps = 14/342 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
LKG V+E AG+ P PFCGM+L++ GA V+R+++HGA D + + L ++LK +
Sbjct: 4 LKGFRVIEMAGIGPGPFCGMLLSDLGAQVLRVERHGASADAHDPLQRNRLRLALDLKDPQ 63
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ V+ ++ +D + E +R GV E+L GPD + N +L+Y R++G+GQDGP +S AG
Sbjct: 64 QVGVLLDIVEHADALFEGYRPGVAERLGFGPDDCLQRNAKLVYGRMTGWGQDGPLASTAG 123
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ LSG L +G P PP NL DFGGGG++ A G+V AL ER +SG+GQV+D
Sbjct: 124 HDINYIALSGALHAIGRSGERPVPPLNLVGDFGGGGMLLAFGMVCALLERERSGQGQVVD 183
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+GS L + Q L G + L G AH+YDTY+TKDG+FMAVGALE QFY
Sbjct: 184 AAMVDGSIALMAMFLGMQARGLSCNQVGSHFLSGAAHYYDTYQTKDGKFMAVGALEPQFY 243
Query: 243 AQLLAGLGMTEEEL------------PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
+L+A G+ P+ E + L E+F +T+ EWC +F +DAC
Sbjct: 244 GELIAKAGLDPNVFGGSSFMSPAGHDPRRWAEL-KPLLAEQFMTRTRDEWCAVFAGSDAC 302
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
V PVL+L +A HPHN R +F+ AGV APAPR SRTP
Sbjct: 303 VAPVLTLEEAAQHPHNRARHAFV-TVAGVTQNAPAPRFSRTP 343
>gi|169615729|ref|XP_001801280.1| hypothetical protein SNOG_11028 [Phaeosphaeria nodorum SN15]
gi|111060407|gb|EAT81527.1| hypothetical protein SNOG_11028 [Phaeosphaeria nodorum SN15]
Length = 399
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/311 (51%), Positives = 208/311 (66%), Gaps = 7/311 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKA 61
LKGI VLEFAGLAP PF G++L ++GA+V+R+D+ P D + K S+C++LK
Sbjct: 10 LKGIRVLEFAGLAPGPFAGLLLADYGASVLRLDRATTTPHPTSDQLTRRKTSICVDLKSP 69
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSM 120
GL+++K L DV+++PFR GV+EK L P+ VL K NPRLI AR++G+ +DG Y M
Sbjct: 70 SGLALIKKLIPTVDVLIDPFRPGVLEKSGLDPENVLRKINPRLIVARMTGFRRDGKYKDM 129
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ +SG+LSL G + P PP NL DF GGG MC LGI++ALF R K+G GQV
Sbjct: 130 AGHDINYIAVSGVLSLFGRKGEKPYPPGNLVGDFAGGGAMCFLGILLALFAREKTGFGQV 189
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
++ NMV+GSA L + T +W + RG N+LDGGA FYDTYETKDG++MAVGA+E Q
Sbjct: 190 VEANMVDGSAVLATMPRLGLKTEVWRRERGTNMLDGGAPFYDTYETKDGKYMAVGAIEPQ 249
Query: 241 FYAQLLAGLGMTEEELP-QHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVL 295
FYA LL GL + +LP + KL E KFK KT+ EW IFD TDAC TPVL
Sbjct: 250 FYAALLKGLQVKPSDLPGDRDNRADWPKLKEWFAQKFKTKTRDEWEAIFDGTDACCTPVL 309
Query: 296 SLSQATSHPHN 306
+ H+
Sbjct: 310 THDDLEKQGHD 320
>gi|254427681|ref|ZP_05041388.1| CAIB/BAIF family [Alcanivorax sp. DG881]
gi|196193850|gb|EDX88809.1| CAIB/BAIF family [Alcanivorax sp. DG881]
Length = 383
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 231/381 (60%), Gaps = 16/381 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF--VQDTVGY-GKKSLCINLK 59
L G+T +E AG+ P PFCGM+L + GATVIRID+ G P + TV + +++L ++LK
Sbjct: 8 LNGLTFIELAGIGPGPFCGMMLADMGATVIRIDRPGGNPHSAIGHTVLFRNRQNLAVDLK 67
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
A+G+ + L +D + E FR GV E+L +GP+ NP+L+Y R++G+GQ GP +
Sbjct: 68 SAEGIETVLKLCETADGLFEGFRPGVTERLGVGPEQCLARNPKLVYGRMTGWGQTGPLAQ 127
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ LSG L +G P P NL DFGGGG+M A G+V A E +SG+GQ
Sbjct: 128 AAGHDMNYISLSGALHAMGREGEKPAIPLNLVGDFGGGGMMLAFGMVCAALEAQRSGKGQ 187
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID +MVEGSA L + + ++ RG ++LD GAHFY+ YET DG+++++G++E
Sbjct: 188 VIDSSMVEGSAALMAMFYGLKSQGMFTDNRGTHMLDSGAHFYEVYETADGKYVSIGSIEP 247
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYAQL + E+ H++ + KL K+KT+ EW + + TD C PV
Sbjct: 248 QFYAQLCQLAELPAEDF-GHQINPPKWPEMKQKLAAVIKQKTRDEWSALMEGTDVCFAPV 306
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA--PGVHTREVL 352
LSL +A SHPHNV R SF+ G PAP PR SRT E PA G +R VL
Sbjct: 307 LSLEEAPSHPHNVARESFV-TVNGAAQPAPTPRFSRT----AAGEIKPATTAGADSRAVL 361
Query: 353 RHFGYSDANIEELIREDVIEE 373
G+SD++I+ LI +++
Sbjct: 362 SQAGFSDSDIDGLIASGAVKQ 382
>gi|78060271|ref|YP_366846.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
gi|77964821|gb|ABB06202.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
Length = 386
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/382 (41%), Positives = 228/382 (59%), Gaps = 17/382 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--------HGAQPFVQDTVGYGKKSL 54
L G+ ++E G+ P PFC M+L + GA V+R+D+ H F + + G++S+
Sbjct: 10 LAGLKIIELGGIGPGPFCAMLLADMGADVLRLDRIVPSDSGVHMDHRF--NLLNRGRRSV 67
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
I+LK+ + + ++K L +D LE FR GV E+L LGPD L NPRL+Y R++G+GQD
Sbjct: 68 AIDLKRPQAVELVKRLTASADAALEGFRPGVAERLGLGPDDLLAHNPRLVYGRMTGWGQD 127
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + GHD+NY+ LSG L +G R+ P PP NL DFGGG + A G+V A+ E ++
Sbjct: 128 GPLAQAPGHDMNYISLSGALHTIGERDGPPVPPLNLVGDFGGGAMYLAFGMVCAMLEAAR 187
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
SG GQV+D +MV+GSA+L + + W RG+N LD G +Y Y T+D R++++
Sbjct: 188 SGTGQVVDASMVDGSAHLMTLIYGMYAAGAWSDRRGDNRLDSGTPWYSVYRTRDDRYVSL 247
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
+ E +FY + LA LG+++ LP G R T F KT+ EWC + TD C
Sbjct: 248 ASNEPRFYRETLALLGLSDTPLPDQHDRHGWPVLREHFTRVFATKTRDEWCALAAGTDVC 307
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
+ PVLSL++A HPHNV RG+F+ G+V P PAPR SRT T + PAPG HT +
Sbjct: 308 LAPVLSLAEAPHHPHNVARGTFV-EVDGIVQPGPAPRFSRTKPT--LRGGAPAPGAHTTD 364
Query: 351 VLRHFGYSDANIEELIREDVIE 372
LR +G ++ L E V++
Sbjct: 365 ALRDWGIDAREVDALRAEGVLQ 386
>gi|417749776|ref|ZP_12398165.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
avium subsp. paratuberculosis S397]
gi|336458775|gb|EGO37735.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
avium subsp. paratuberculosis S397]
Length = 360
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 216/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L+G+ V+E +G+ P P MIL + GA V+RID+ P V+D + ++ + +LK
Sbjct: 5 LQGLRVVELSGIGPGPHAAMILGDLGADVVRIDRPSGAPGGVVKDAMSRNRRIVTADLKS 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L ++DV++E +R GV E+L LGP K N RLIYAR++G+GQ GP S
Sbjct: 65 DQGRELVLKLVAKADVLIEGYRPGVTERLGLGPQDCAKVNDRLIYARMTGWGQTGPRSQQ 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 125 AGHDINYISLNGILHAIGRANERPVPPLNLVGDFGGGSMFLMLGILSALWERQSSGKGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 185 VDAAMVDGSSVLVQMMWQMRASGMWTDARGTNLLDGGAPYYDTYECADGRYVAVGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTPVL+
Sbjct: 245 FYAAMLAGLGLDGADLPGQNDVSRWPELRAALTEKFASRDRDHWAKVFADSDACVTPVLA 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 305 FGEVQTEPHITERNTFYEVDGG-LQPLPAPRFSRT 338
>gi|297564140|ref|YP_003683113.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296848589|gb|ADH70607.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 364
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/365 (44%), Positives = 222/365 (60%), Gaps = 14/365 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG-----YGKKSLCIN 57
L GI V+EF G+ PAP GM+L + GA+VIR+D+ A + G G+ L +
Sbjct: 4 LNGIRVVEFTGIGPAPMAGMLLADLGASVIRLDRPAAADAMNSGAGGPHLSEGRTVLPAD 63
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +GL++ ++LA+++DV+LE FR GVME+L LGP+V ++NPRL+YAR++G+GQDGP
Sbjct: 64 LKSEEGLALARDLASRADVLLEGFRPGVMERLGLGPEVCLEANPRLVYARVTGWGQDGPL 123
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ ++G L +G P PP NL DF GG + G++ AL ER SGR
Sbjct: 124 ARAAGHDMNYISVNGALHAIGRAGGPPVPPVNLLGDFAGGTMFAVTGVLGALVERQSSGR 183
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+GSA L S L + W RG N LD GA +YD YE DGR+++VG +
Sbjct: 184 GQVVDAAMVDGSALLMSMLHEDRARGSWSDERGTNYLDTGAPWYDVYECADGRYVSVGCI 243
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTP 293
E QFYA L G G+ E+LP +G +L E+F E +T+ W E+F+ DACV P
Sbjct: 244 EPQFYAAFLEGTGLAGEDLPDQWDRSGWPRLRERFAEVLRTRTRDAWGEVFEGADACVMP 303
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLSL +A HPH RGS + + +++ PAPR RTPG P T LR
Sbjct: 304 VLSLEEAPDHPHVRARGSLVRDGDRILS-GPAPRFDRTPGGVTRGAEQP----DTARTLR 358
Query: 354 HFGYS 358
+G +
Sbjct: 359 EWGLT 363
>gi|156059562|ref|XP_001595704.1| hypothetical protein SS1G_03793 [Sclerotinia sclerotiorum 1980]
gi|154701580|gb|EDO01319.1| hypothetical protein SS1G_03793 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 404
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/357 (46%), Positives = 224/357 (62%), Gaps = 25/357 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--------HGAQPFVQDTVGYGKKSL 54
L GI VLEFAGLAP PF G++L ++GA+V+RID+ P D + K S+
Sbjct: 7 LTGIRVLEFAGLAPGPFAGLLLADYGASVLRIDRAIPNLTHTSSIPPPTADLLTRHKSSI 66
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK + G+S +K+L DVI++PFR GV+EKL L PDVL + NPRLI AR++G+ +D
Sbjct: 67 AVDLKSSAGISFIKSLVAHCDVIIDPFRPGVLEKLGLSPDVLLQLNPRLILARMTGFRRD 126
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
G Y MAGHDINY+ +SG LSLLG ++ P PP N+ DF GGG GI++AL R K
Sbjct: 127 GKYKDMAGHDINYIAVSGALSLLGRKHEKPLPPANILGDFAGGGAALFQGILLALLAREK 186
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
SG+GQV++ NMV+GSAYL S+ + T +W+KPRGEN LD G+ +YDTY+TKDG++MAV
Sbjct: 187 SGKGQVVEANMVDGSAYLVSFPRMLRKTPMWNKPRGENTLDSGSPYYDTYKTKDGKYMAV 246
Query: 235 GALESQFYAQLLAGLGM--TEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDA 289
GALE QF+ +L+ GLG+ T E + + +T R T FK K ++EW IFD TDA
Sbjct: 247 GALEPQFFKELIKGLGLEGTGIEKTREDRKTWPEMRKTFTRLFKAKIRSEWEAIFDGTDA 306
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGV 346
C TPVL + + P+R G P L +TP + T N P +
Sbjct: 307 CCTPVLDYDELEND----------PSREGDQRPMVT--LRKTPSLAMSTNSNQDPSI 351
>gi|110834390|ref|YP_693249.1| CAIB/BAIF family protein [Alcanivorax borkumensis SK2]
gi|110647501|emb|CAL16977.1| CAIB/BAIF family protein [Alcanivorax borkumensis SK2]
Length = 383
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 232/379 (61%), Gaps = 12/379 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF--VQDTVGY-GKKSLCINLK 59
L G+T +E AG+ P PFCGM+L + GATVIRID+ G P + TV + +++L ++LK
Sbjct: 8 LHGLTFIELAGIGPGPFCGMMLADMGATVIRIDRPGGNPHSAIGHTVLFRNRQNLAVDLK 67
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G+ + L +D + E FR GV E+L +GP+ NP+L+Y R++G+GQ GP +
Sbjct: 68 SPEGIETVLKLCETADGLFEGFRPGVTERLGVGPEQCLARNPKLVYGRMTGWGQTGPLAQ 127
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ LSG L +G P P NL DFGGGG+M A G+V A+ E +SG+GQ
Sbjct: 128 AAGHDMNYISLSGALHAMGREGEKPAIPLNLVGDFGGGGMMLAFGMVCAVLEAQRSGKGQ 187
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +MVEGSA L + + ++ RG ++LD GAHFY+ YET DG+++++G++E
Sbjct: 188 VVDSSMVEGSAALMAMFYGLKSQGMFTDNRGTHMLDSGAHFYEVYETADGKYVSIGSIEP 247
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYAQL + E+ H++ + KL K+KT+ EW + + TD C PV
Sbjct: 248 QFYAQLCQLAELPPEDF-GHQINPPKWPEMKQKLAAIIKQKTRDEWSALMEGTDVCFAPV 306
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL +A SHPHNV R SF+ G PAP PR SRT K+ + A G +R VL
Sbjct: 307 LSLEEAPSHPHNVARESFV-TVNGAAQPAPTPRFSRT-AAGKVKPASTA-GADSRAVLSQ 363
Query: 355 FGYSDANIEELIREDVIEE 373
G+SD++I+ LI +++
Sbjct: 364 AGFSDSDIDRLIASGAVKQ 382
>gi|41408736|ref|NP_961572.1| Mcr [Mycobacterium avium subsp. paratuberculosis K-10]
gi|440778075|ref|ZP_20956846.1| Mcr [Mycobacterium avium subsp. paratuberculosis S5]
gi|41397094|gb|AAS04955.1| Mcr [Mycobacterium avium subsp. paratuberculosis K-10]
gi|436721578|gb|ELP45689.1| Mcr [Mycobacterium avium subsp. paratuberculosis S5]
Length = 360
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 216/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L+G+ V+E +G+ P P MIL + GA V+RID+ P V+D + ++ + +LK
Sbjct: 5 LQGLRVVELSGIGPGPHAAMILGDLGADVVRIDRPSGAPGGVVKDAMSRNRRIVTADLKS 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L ++DV++E +R GV E+L LGP K N RLIYAR++G+GQ GP S
Sbjct: 65 DQGRELVLKLVAKADVLIEGYRPGVTERLGLGPQDCAKVNDRLIYARMTGWGQTGPRSQQ 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 125 AGHDINYISLNGILHAIGRANERPVPPLNLVGDFGGGSMFLLLGILSALWERQSSGKGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 185 VDAAMVDGSSVLVQMMWQMRASGMWTDARGTNLLDGGAPYYDTYECADGRYVAVGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTPVL+
Sbjct: 245 FYAAMLAGLGLDGADLPGQNDVSRWPELRAALTEKFASRDRDHWAKVFADSDACVTPVLA 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 305 FGEVQTEPHITERNTFYEVDGG-LQPLPAPRFSRT 338
>gi|94313941|ref|YP_587150.1| alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
gi|93357793|gb|ABF11881.1| Alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
Length = 388
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/376 (45%), Positives = 236/376 (62%), Gaps = 16/376 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---------DTVGYGKKS 53
L GI V+EF + P PF M+L + GA V+RID+ A + D G G++S
Sbjct: 4 LSGIRVIEFEAIGPGPFGAMLLADMGADVLRIDRPVAPTDLGPQRGPGKRIDVTGRGRRS 63
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+ I+LK+ +G L ++DV++E FR G ME+L LGP + NPRLIY R++G+GQ
Sbjct: 64 VTIDLKQPEGQQAALELIAKADVVIEGFRPGTMERLGLGPAIALARNPRLIYGRMTGWGQ 123
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP + AGHD+NY+ LSG+LS +G P PP NL D+GGGG++ ALG+V AL
Sbjct: 124 TGPMADRAGHDLNYIALSGVLSGIGRAGEAPVPPLNLVGDYGGGGMLLALGVVSALLNVH 183
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
+ G+GQV+D M+EG+A LG+ + + W + RG NLLDGG +YD+Y T+DG++M+
Sbjct: 184 RGGKGQVVDAAMIEGAAQLGAVIWGLIASGNWRESRGSNLLDGGTPWYDSYCTRDGQYMS 243
Query: 234 VGALESQFYAQLLAGLGMTEEELP-QHEVE---TGRAKLTEKFKEKTQAEWCEIFDNTDA 289
VGA+ES+FYA+L+ LG+ E LP QH+ T R + TE F +T+ EWC IFD +DA
Sbjct: 244 VGAVESRFYAELIEKLGLAGETLPGQHDRAGWPTLRRRFTEVFLTRTRDEWCAIFDGSDA 303
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
CV PVL+ S+A HP + RGSFI GVV P PAPR TP S++ PA G H
Sbjct: 304 CVAPVLTFSEAPDHPQHRARGSFI-EVDGVVQPGPAPRFLGTP--SEVRHAAPARGQHGG 360
Query: 350 EVLRHFGYSDANIEEL 365
LR +G+ DA I +L
Sbjct: 361 AALREWGFDDAAIAKL 376
>gi|118462940|ref|YP_880529.1| Mcr protein [Mycobacterium avium 104]
gi|254774160|ref|ZP_05215676.1| Mcr [Mycobacterium avium subsp. avium ATCC 25291]
gi|118164227|gb|ABK65124.1| Mcr protein [Mycobacterium avium 104]
Length = 360
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 216/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L+G+ V+E +G+ P P MIL + GA V+RID+ P V+D + ++ + +LK
Sbjct: 5 LQGLRVVELSGIGPGPHAAMILGDLGADVVRIDRPSGAPGGVVKDAMSRNRRIVTADLKS 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L ++DV++E +R GV E+L LGP K N RLIYAR++G+GQ GP S
Sbjct: 65 DQGRELVLKLVAKADVLIEGYRPGVTERLGLGPQDCAKVNDRLIYARMTGWGQTGPRSQQ 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 125 AGHDINYISLNGILHAIGRANERPVPPLNLVGDFGGGSMFLLLGILSALWERQSSGKGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 185 VDAAMVDGSSVLVQMMWQMRASGMWTDARGTNLLDGGAPYYDTYECADGRYVAVGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTPVL+
Sbjct: 245 FYAAMLAGLGLDGADLPGQNDVSRWPELRAALTEKFASRDRDHWAKVFADSDACVTPVLA 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 305 FGEVQTEPHITERNTFYEVDGG-LQPLPAPRFSRT 338
>gi|171315759|ref|ZP_02904991.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria MEX-5]
gi|171099058|gb|EDT43838.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria MEX-5]
Length = 372
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 219/348 (62%), Gaps = 12/348 (3%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRI-----DKHGAQPFVQDTVGYGKKSLCI 56
AL+G+ V+EFAGL PAPFC M+L++ GA V+RI D A D + G++++ +
Sbjct: 4 ALEGLRVIEFAGLGPAPFCCMMLSDHGADVLRIVRPRDDGQEAHADPHDVLARGRRTVPL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+L + + L SDV++E FR GVME+L LGPDV NP+LIY R++G+GQ GP
Sbjct: 64 DLHRPSAVDAALALIAHSDVLVEGFRPGVMERLGLGPDVCLAVNPKLIYGRMTGWGQVGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+ +SG L +G P PP NL DFGGGG+M A G++ AL E +SG
Sbjct: 124 LAHAAGHDINYIAISGALHAIGRPGDAPVPPMNLIGDFGGGGMMLAFGVMAALHEMRRSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQVID M +GSA L + + + + W RGENLLDGGA FYDTY DG+++A+GA
Sbjct: 184 RGQVIDVAMTDGSALLSAMMYGMKSSGHWTSRRGENLLDGGAPFYDTYACADGKYIAIGA 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACV 291
+E QFYA+L G+ E+ L +++T R +L + F+ +T+ EWC + + +DAC
Sbjct: 244 IEPQFYAELRERCGI-EDPLFDVQMDTARWPLLKLRLADVFRTRTRTEWCALLEGSDACF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
PVL +A HPHN RG+F+ + V+ PA APR SRTP ++
Sbjct: 303 APVLDWDEAPEHPHNRMRGAFV-SLESVIQPAAAPRFSRTPAAEPRSQ 349
>gi|416914869|ref|ZP_11931967.1| Alpha-methylacyl-CoA racemase [Burkholderia sp. TJI49]
gi|325527782|gb|EGD05055.1| Alpha-methylacyl-CoA racemase [Burkholderia sp. TJI49]
Length = 384
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/374 (43%), Positives = 232/374 (62%), Gaps = 15/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQ--DTVGYGKKSLCI 56
L G+ ++E G+ P PFC M+L++ GA +IRID+ G QP + + G++S
Sbjct: 8 LAGVRIVELGGVGPVPFCCMLLSDLGADIIRIDRPPGYDGGQPGDPRFNLLNRGRRSAAF 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LKK + + + L Q+D ++E FR GV EKL LGPD NP L+Y R++G+GQDGP
Sbjct: 68 DLKKPEATNAVLKLVAQADALVEGFRPGVAEKLGLGPDACLAVNPALVYGRMTGWGQDGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ GHD+NY+ L+G+L +G P P NLA DFGGG L ALG+V AL E +SG
Sbjct: 128 LAQAPGHDVNYISLTGVLHAVGAAGGPPVIPLNLAGDFGGGSLYLALGVVSALLESRRSG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+GSA L + + W RG N LD GA +Y+ YETKDGR+++VG+
Sbjct: 188 QGQVVDAAMVDGSASLMTLFYGMFASGYWKDERGSNRLDSGAPWYNVYETKDGRWVSVGS 247
Query: 237 LESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E++F+ LA LG+ EE++P QH+ AK TE F+ +T+ EWC + + C+
Sbjct: 248 NETRFWRNTLALLGLREEDMPDQHDRSRWPEVHAKFTELFRTRTRDEWCAFAEGREVCIA 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREV 351
PV+SL++A +HPH R +F+ R GVV PAPAPR SRTPG + +PA PG HT V
Sbjct: 308 PVMSLTEAPTHPHLRARQTFV-ERDGVVQPAPAPRFSRTPGA---IQSSPARPGEHTDAV 363
Query: 352 LRHFGYSDANIEEL 365
L +G++ A + L
Sbjct: 364 LGDWGFTAAELATL 377
>gi|359418354|ref|ZP_09210337.1| alpha-methylacyl-CoA racemase [Gordonia araii NBRC 100433]
gi|358245696|dbj|GAB08406.1| alpha-methylacyl-CoA racemase [Gordonia araii NBRC 100433]
Length = 368
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 213/337 (63%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L+ I V+EFAG+ P P M+L + GA VIR+ + G P D + G++ + NLK
Sbjct: 13 LRSIRVIEFAGIGPGPHAAMLLADLGADVIRVQRPGDLPQEGRNADALLRGRRVVEANLK 72
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ NL ++D I+E FR GVME+L GPD L NP L+Y R++G+GQDGP +
Sbjct: 73 NPADRETILNLVAKADAIIEGFRPGVMERLGFGPDDLAAVNPGLVYGRMTGWGQDGPRAE 132
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHD+NY+ L+G+L +G + PTPP NL DFGGG + +GI+ AL ER SG+GQ
Sbjct: 133 LAGHDMNYISLTGMLHAIGRADEKPTPPLNLVGDFGGGSMFLVIGILSALVERQVSGKGQ 192
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G++ LG + + T LW RG NLLD GA FY+ YET DG++MAVG++E
Sbjct: 193 VIDAAMVDGASVLGQMMWSFRGTGLWQDKRGANLLDTGAPFYEVYETSDGKWMAVGSIEP 252
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+LL GL + E LP H+++ G +AK TE FK KT+ EW +FD TDACV+P+
Sbjct: 253 QFYAELLKGLELDPESLP-HQLDMGKWDELKAKFTEVFKTKTRDEWAAVFDGTDACVSPI 311
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
L +A PH RG+ + GV+ APR SRT
Sbjct: 312 LDFVEAPQDPHLAARGTLV-EIDGVMQAQVAPRFSRT 347
>gi|410446627|ref|ZP_11300730.1| CoA-transferase family III protein [SAR86 cluster bacterium SAR86E]
gi|409980299|gb|EKO37050.1| CoA-transferase family III protein [SAR86 cluster bacterium SAR86E]
Length = 368
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 222/360 (61%), Gaps = 11/360 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQDTVGYGKKSLCINLK 59
L GIT++EFAG+ P PFCGMIL + GA VIRID+ HG + D K SL +LK
Sbjct: 5 LNGITLVEFAGIGPGPFCGMILADLGAEVIRIDRSSQHGHGNTI-DFQHRSKSSLTADLK 63
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K + +K L D ++E FR GVME+L LGPD NP L+Y R++G+GQ GP +
Sbjct: 64 NPKTVKEIKKLLKNVDGLIEGFRPGVMERLGLGPDECFNENPNLVYGRMTGWGQVGPLAK 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G L +G +++ P PP NL DFGGGG+ ALGIV AL + G+GQ
Sbjct: 124 TAGHDINYIALTGALESMGRKDQTPPPPLNLVGDFGGGGMFLALGIVAALLNIKQGGKGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ L S + + W + R NLLDG AHFYDTYE D +F+AVG++E
Sbjct: 184 VVDAAMVDGASVLMSMFYAFKASGFWSEERESNLLDGAAHFYDTYECADKKFLAVGSIEP 243
Query: 240 QFYAQLLAGLGMTEEEL-PQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFY+ LL L + + + QH E + + EK K+K++ EW IFD +DACV PVL
Sbjct: 244 QFYSVLLEKLEIIDPKFQDQHNKELWPELKVIIAEKIKKKSRDEWANIFDGSDACVAPVL 303
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
SLS+A H H R SFI + GV+ PAPAPR S T T++I + G + E+ +
Sbjct: 304 SLSEAPKHHHMKARNSFI-DVDGVIQPAPAPRFSDT--TAQIRHSSVKAGENNEEICSKY 360
>gi|379738273|ref|YP_005331779.1| putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Blastococcus
saxobsidens DD2]
gi|378786080|emb|CCG05753.1| Putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Blastococcus
saxobsidens DD2]
Length = 366
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 224/365 (61%), Gaps = 15/365 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG------YGKKSLCI 56
L G+ V+EFAGL P PFCGM+L + GA V+RID+ GA+ + ++G GK+S+ +
Sbjct: 4 LAGVRVVEFAGLGPGPFCGMLLADLGADVVRIDRRGARGGLLGSLGATSLLDRGKRSIAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + V++ L ++DV+LE FR GVME+L LGPD L NP L+Y R++G+GQ GP
Sbjct: 64 DLKDPADVDVVRALVRRADVLLEGFRPGVMERLGLGPDELLGENPALVYGRMTGWGQTGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDI Y+ L+G+L G + P PP NL DFGGGG+ ALG + AL +G
Sbjct: 124 LAHSAGHDIGYIALTGVLGASGRPDERPAPPLNLLGDFGGGGVFLALGALAALIRARATG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+G+A L + + W RG NLLD GA FYD Y DG+F+AVGA
Sbjct: 184 EGQVVDAAIVDGTAVLTTMIHGMLGAGAWTDERGRNLLDTGAPFYDVYRCADGQFLAVGA 243
Query: 237 LESQFYAQLLAGLGMT-EEELPQ----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA LL GLG++ +E LP + R + T+ F +T+AEW ++F+ TDACV
Sbjct: 244 LEEQFYAALLEGLGLSGDESLPDRNDPRQWPALRERFTDAFAARTRAEWWQVFEGTDACV 303
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PV SL +AT HN RG F+ GV PA APR S TPG PAPG H E+
Sbjct: 304 APVWSLLEATEDRHNTERGVFV-EVDGVRQPAVAPRFSVTPGAVGSV---PAPGQHDEEI 359
Query: 352 LRHFG 356
L G
Sbjct: 360 LAELG 364
>gi|154290912|ref|XP_001546045.1| hypothetical protein BC1G_15388 [Botryotinia fuckeliana B05.10]
Length = 423
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 156/334 (46%), Positives = 210/334 (62%), Gaps = 32/334 (9%)
Query: 3 LKGITVLEFAGLAPA-------------------PFCGMILNEFGATVIRIDK------- 36
L G+ VLEFAGLAP PF G++L ++GA+V+RID+
Sbjct: 7 LTGVRVLEFAGLAPGRCPRITPDSITSPLTSIAGPFAGLLLADYGASVLRIDRAVPNLTH 66
Query: 37 -HGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDV 95
P D + K S+ ++LK G+S +K+L +D+I++PFR GV+EKL L PDV
Sbjct: 67 SSSVPPATADFLTRHKSSIAVDLKANAGISFVKSLVVHADIIIDPFRPGVLEKLGLSPDV 126
Query: 96 LCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFG 155
L K NPR+I AR++G+ +DG Y MAGHDINY+ +SG LSLLG +N P PP N+ DF
Sbjct: 127 LLKLNPRIILARMTGFRRDGKYKDMAGHDINYIAVSGALSLLGRKNEKPLPPANILGDFA 186
Query: 156 GGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLD 215
GGG GI++AL R KSG+GQV++ NMV+GSAYL ++ T +W+KPRGEN LD
Sbjct: 187 GGGATLFQGILLALLAREKSGKGQVVEANMVDGSAYLVTFPRMLMKTPMWNKPRGENTLD 246
Query: 216 GGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTE 270
G+ FYDTYETKDG++MAVGALE QF+ +L+ GLG+ E ++ + ++ R T
Sbjct: 247 SGSPFYDTYETKDGKYMAVGALEPQFFKELVKGLGLGETDIEETRMDRSTWPEMRETFTR 306
Query: 271 KFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHP 304
FKEK ++EW IFD TDAC TPVL + P
Sbjct: 307 LFKEKARSEWENIFDGTDACCTPVLGFDELEKDP 340
>gi|441511879|ref|ZP_20993726.1| alpha-methylacyl-CoA racemase [Gordonia amicalis NBRC 100051]
gi|441453323|dbj|GAC51687.1| alpha-methylacyl-CoA racemase [Gordonia amicalis NBRC 100051]
Length = 369
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 220/336 (65%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G+ P D + G++ + NLK
Sbjct: 15 LSSIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGSLPKPGVNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + +L ++DVILE FR GVME+L GPD L + NP L+Y R++G+GQDGP ++
Sbjct: 75 DETDRATILDLVAKADVILEGFRPGVMERLGFGPDDLTEVNPGLVYGRMTGWGQDGPRAN 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G ++ P PP NLA DFGGG + +G++ AL ER SG+GQ
Sbjct: 135 LAGHDINYISLTGLLHAIGRKDDRPVPPLNLAGDFGGGSMFLVVGVLAALLERGISGKGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWSDTRGTNMLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELP-QHEVET-GRAK--LTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GLG+ + +LP Q+++ G+ K TE FK +T+ EW ++FD TDAC +PVL
Sbjct: 255 QFYAELLKGLGLADADLPAQNDIANWGKLKEIFTETFKSRTRDEWAKVFDGTDACTSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A PH R + + + GV APR SRT
Sbjct: 315 TFAEAPGDPHMAARANLV-DIDGVTQAQVAPRFSRT 349
>gi|375096574|ref|ZP_09742839.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora marina XMU15]
gi|374657307|gb|EHR52140.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora marina XMU15]
Length = 356
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/334 (47%), Positives = 215/334 (64%), Gaps = 11/334 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E AG+ P P MIL + GA V+R+++ G + + G++S+ +LK +
Sbjct: 5 LTGIRVVELAGIGPGPHAAMILADLGADVVRVERPGGED--GGAMLRGRRSVAADLKTPE 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G ++ LA ++DV+LE FR GV E+L LGP NPRLIY R++G+GQ GP S AG
Sbjct: 63 GHALALRLAEKADVLLEGFRPGVAERLGLGPADCHAVNPRLIYGRMTGWGQHGPLSQRAG 122
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G+L +G R+ P PP NL DFGGG + +G++ AL+ER +SG+GQV+D
Sbjct: 123 HDINYISLTGVLHAIGRRDERPVPPLNLVGDFGGGSMFLLVGVLSALWERQRSGQGQVVD 182
Query: 183 CNMVEGSAYLGS--WLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
MV+G++ L W R Q T W RG NLLDGGA FYDTYE DGR++AVGA+E Q
Sbjct: 183 AAMVDGASVLAQMMWSMRGQGT--WTDERGGNLLDGGAPFYDTYECADGRYVAVGAIEPQ 240
Query: 241 FYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYAQLLAGLG+ +LP Q R++L E F + + W ++F TDACVTPVL+
Sbjct: 241 FYAQLLAGLGLDPADLPGQLEQDRWPQLRSRLAEAFGAQPREHWEQVFAATDACVTPVLT 300
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
++A HP+ RG+ + GV PAPAPR SR
Sbjct: 301 FAEAADHPNLAARGTIV-ELDGVAQPAPAPRFSR 333
>gi|167646669|ref|YP_001684332.1| L-carnitine dehydratase/bile acid-inducible protein F [Caulobacter
sp. K31]
gi|167349099|gb|ABZ71834.1| L-carnitine dehydratase/bile acid-inducible protein F [Caulobacter
sp. K31]
Length = 375
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 226/375 (60%), Gaps = 11/375 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-QPFVQDTVGYGKKSLCINLKKA 61
L G+ VLEFAG+ P PFCGM+L++ GA VIRID+ G+ + D G++S+ ++LK
Sbjct: 6 LSGLKVLEFAGIGPGPFCGMLLSDLGADVIRIDRKGSGRSSPADVTARGRRSVALDLKSP 65
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ L +D ++E FR GVME+L LGPDV NP+L++ R++G+GQ GPY+ A
Sbjct: 66 AAVETCLKLMESADGLIEGFRPGVMERLGLGPDVALARNPKLVFGRMTGWGQTGPYAKAA 125
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ ++G L+ +G +++ P PP NL DFGGG L A G++ + ++G+GQVI
Sbjct: 126 GHDMNYIAITGALAAIGTQDK-PVPPLNLVGDFGGGALYLAFGLLAGVIHARETGQGQVI 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
DC M +G+A L + + +W + R NLLDGGAHFYDTY+ DG+++++G++E QF
Sbjct: 185 DCAMSDGAASLMAMFYGFKAGGMWGEGRRSNLLDGGAHFYDTYQCSDGKWISIGSIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
Y LL G+T+ + QH++ R KL KT+ EWC + D TD C PVL+
Sbjct: 245 YLLLLEKTGITDPQF-QHQMSREEWPQLREKLAAVIATKTRDEWCALMDGTDVCFAPVLT 303
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ +A H HN R +F+ AGV PAPAPR S TPG I P G L +G
Sbjct: 304 MDEAPGHAHNAARQTFV-EVAGVTQPAPAPRFSATPGA--IQGPPPTIGADNDSALGDWG 360
Query: 357 YSDANIEELIREDVI 371
+S I L + +
Sbjct: 361 FSAGEIAALKEQGAL 375
>gi|87200469|ref|YP_497726.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium aromaticivorans DSM 12444]
gi|87136150|gb|ABD26892.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium aromaticivorans DSM 12444]
Length = 408
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 170/373 (45%), Positives = 233/373 (62%), Gaps = 14/373 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-----GKKSLCIN 57
L GI V+EFAGL P PF MIL +FGA V+R+++ G Y + ++ ++
Sbjct: 31 LAGIRVVEFAGLGPTPFSCMILADFGAEVLRVERIGQVSAAGGDERYNYLNRSRSTIALD 90
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +GL++ + LA+++DV++E FR G ME+L LGPD LC NPRL+Y+R++G+GQ GP
Sbjct: 91 LKSDEGLALARELASRADVLVEGFRPGAMERLGLGPDELCALNPRLVYSRMTGWGQTGPL 150
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINYL L+G L L+G ++ P PP N AA+FGGGG++ GI+ AL ER+ SGR
Sbjct: 151 AQTAGHDINYLALTGGLDLIGPPDQPPPPPLNFAANFGGGGMLLVAGILAALVERATSGR 210
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQVID M++G++ L + + +W RG NLLDG A+FY YET DGR+MAVGAL
Sbjct: 211 GQVIDAAMIDGASLLMTQVFAWTRMGIWRPGRGGNLLDGSAYFYRCYETSDGRYMAVGAL 270
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTP 293
E QF+A +A LG+ E H A+ + F+E+TQAEW +F+ DACVTP
Sbjct: 271 EPQFHALFVAALGLDPVEFANHLDPRNWAERATRIALLFRERTQAEWTAVFEGIDACVTP 330
Query: 294 VLSLSQATSHPHNVHRGSFI-PNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
VLS +A HP N+ RG + P A PAPAPRLSRTPG + G + + L
Sbjct: 331 VLSPEEAVHHPANMARGVHVGPEDA--RQPAPAPRLSRTPGM--VRSMPSLAGENGAQAL 386
Query: 353 RHFGYSDANIEEL 365
++G+ I L
Sbjct: 387 ENWGFDSRTIATL 399
>gi|399075278|ref|ZP_10751464.1| putative acyl-CoA transferase/carnitine dehydratase [Caulobacter
sp. AP07]
gi|398039198|gb|EJL32338.1| putative acyl-CoA transferase/carnitine dehydratase [Caulobacter
sp. AP07]
Length = 375
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 225/369 (60%), Gaps = 11/369 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-QPFVQDTVGYGKKSLCINLKKA 61
L G+ VLEFAG+ P PFCGM+L++ GA V+RID+ G+ + D G++S+ ++LK
Sbjct: 6 LSGLKVLEFAGIGPGPFCGMLLSDLGADVVRIDRKGSGRSSPADVTARGRRSVALDLKSP 65
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ L +D I+E FR GVME+L LGPDV NPRL+Y R++G+GQ GPY+ A
Sbjct: 66 AAVETCLKLMEGADGIIEGFRPGVMERLGLGPDVALARNPRLVYGRMTGWGQTGPYAKAA 125
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ ++G L+ +G +++ P PP NL DFGGG L A G++ + ++G+GQVI
Sbjct: 126 GHDMNYIAITGALAAIGTQDK-PVPPLNLVGDFGGGALYLAFGLLAGVIHARQTGQGQVI 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
DC M +G+A L + + +W + R NLLDGGAHFYDTY+ DG+++++G++E QF
Sbjct: 185 DCAMSDGAASLMAMFYGFKAGGMWGEGRRSNLLDGGAHFYDTYQCGDGKWISIGSIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
Y LL G+T+ + QH++ KL K++ EWC + D TD C PVL+
Sbjct: 245 YLLLLEKTGITDPQF-QHQMSREEWPQLHDKLAAVIATKSRDEWCALMDGTDVCFAPVLT 303
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ +A +HPHN R +F+ AGV PAPAPR S TPG I P G L +G
Sbjct: 304 MDEAPAHPHNAARQTFV-EVAGVTQPAPAPRFSATPGA--IQGPPPKIGADNDGALADWG 360
Query: 357 YSDANIEEL 365
+S I L
Sbjct: 361 FSPEAIGAL 369
>gi|404258124|ref|ZP_10961446.1| alpha-methylacyl-CoA racemase [Gordonia namibiensis NBRC 108229]
gi|403403212|dbj|GAB99855.1| alpha-methylacyl-CoA racemase [Gordonia namibiensis NBRC 108229]
Length = 369
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 220/336 (65%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G P D + G++ + NLK
Sbjct: 15 LSSIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGTLPKPGVNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + +L ++DVI+E FR GVME+L GPD L + NP L+Y R++G+GQDGP ++
Sbjct: 75 DETDRATILDLVAKADVIIEGFRPGVMERLGFGPDDLTEVNPGLVYGRMTGWGQDGPRAN 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G ++ P PP NLA DFGGG + +G++ AL ER SG+GQ
Sbjct: 135 LAGHDINYISLTGLLHAIGRKDDRPVPPLNLAGDFGGGSMFLVVGVLAALLERGISGKGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWSDTRGTNMLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELP-QHEVET-GRAK--LTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GLG+ + +LP Q+++ G+ K TE FK +T+ EW ++FD TDAC +PVL
Sbjct: 255 QFYAELLKGLGLADADLPAQNDIANWGKLKEIFTETFKSRTRDEWAKVFDGTDACTSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A + PH R + + + GV APR SRT
Sbjct: 315 TFAEAPADPHMAARANLV-DIDGVTQAQVAPRFSRT 349
>gi|84501712|ref|ZP_00999884.1| putative fatty acid-CoA racemase [Oceanicola batsensis HTCC2597]
gi|84390333|gb|EAQ02892.1| putative fatty acid-CoA racemase [Oceanicola batsensis HTCC2597]
Length = 375
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 223/373 (59%), Gaps = 7/373 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E G+ PAP G L + GA V I + + D GK+S+ +NLK A+
Sbjct: 5 LAGLRVVEMQGIGPAPLAGQFLADLGAEVTLIARASGRTDPADINSRGKRSVALNLKTAE 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G+ + +L ++DV++E FR GVME++ LGP+ NP LIY R++G+GQ+GP + AG
Sbjct: 65 GVEIALSLIARADVLIEGFRPGVMERMGLGPEACHAENPGLIYGRMTGWGQEGPLAQTAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYLGL+G L +G + PTPP N+ AD+GGG + GI+ AL+ER +SG GQV+D
Sbjct: 125 HDINYLGLTGFLHAIGRADDVPTPPLNIGADYGGGTMFLLFGIMAALYERQRSGAGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G++ L + W + R NLLDGGA FY TYE DG F+AVG +E QF+
Sbjct: 185 AAMVDGASALMGLIHGMIARGHWSETREANLLDGGAPFYRTYECADGLFLAVGPIEPQFF 244
Query: 243 AQLLAGLGMTEE----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A+L+ G+ E+ ++ + RA E F++KT+ EW IFD TDAC TPVLS S
Sbjct: 245 AELVRLAGLPEDHRATQMDARDWPARRAAYAEVFRQKTRDEWTAIFDGTDACATPVLSWS 304
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
+A +HPH RG+F+ + GV APAPR SRT H APG T +L GY
Sbjct: 305 EAPAHPHLAARGTFV-SPGGVTQAAPAPRFSRTATAPVSAPH--APGEDTDPILAELGYD 361
Query: 359 DANIEELIREDVI 371
I L E V+
Sbjct: 362 AETIVRLRAEKVL 374
>gi|256394573|ref|YP_003116137.1| L-carnitine dehydratase/bile acid-inducible protein F
[Catenulispora acidiphila DSM 44928]
gi|256360799|gb|ACU74296.1| L-carnitine dehydratase/bile acid-inducible protein F
[Catenulispora acidiphila DSM 44928]
Length = 377
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 230/375 (61%), Gaps = 11/375 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L+G+ V+E AG+ P PF M+L + GA VIR+D+ G +D + G++S+ ++LK
Sbjct: 5 LQGLKVVEIAGIGPGPFAAMLLADLGAEVIRVDRPGGGGLSLGEKDVLNRGRRSVAVDLK 64
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G V+ LA ++DV++E +R GV E+L +GP NP L+Y R++G+GQ+GP ++
Sbjct: 65 HPGGAEVVLRLAERADVLIEGYRPGVAERLGIGPAECLARNPALVYGRMTGWGQEGPLAA 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDI Y+ ++G L +G P P NL DFGGG + +GI+ A++E +SGRGQ
Sbjct: 125 TAGHDIGYVAVTGTLHAIGRAGGPPQVPLNLVGDFGGGSMYLVVGILAAVWEAERSGRGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+G+A+L + L LW RG NLLD GA FYD YET DG MAVGA+E
Sbjct: 185 VVDAAIVDGTAHLSAILHGFVSLGLWRDRRGTNLLDTGAPFYDVYETSDGEHMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
QF+A+L+A LG+ + Q++ E R L E F+ +T+ EW E+F +DACV PVLS
Sbjct: 245 QFFAELVARLGIADRAPGQNDRERWPELRVLLAETFRTRTREEWTEVFAGSDACVAPVLS 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+A HPH RG+ + R G+ PAPAPR SRT +++ PG HTRE L +G
Sbjct: 305 AKEAPKHPHLAARGTLV-ERDGLTQPAPAPRFSRT--GAELGLPPCGPGAHTREALGAWG 361
Query: 357 YSDANIEELIREDVI 371
+ D +E L+ +
Sbjct: 362 FED--VEALVEAGAV 374
>gi|342874673|gb|EGU76651.1| hypothetical protein FOXB_12840 [Fusarium oxysporum Fo5176]
Length = 400
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 152/311 (48%), Positives = 215/311 (69%), Gaps = 11/311 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L GI VLEFAGLAP P+ GM+L + GA+V+RID+ A+P +D + K S+ ++L
Sbjct: 7 LTGIKVLEFAGLAPGPYAGMLLADAGASVLRIDR--ARPDTSAPTEDMLARHKSSISVDL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G+++++ L ++DV+++PFR GV+EKL LGPD LC+ NPRLIY R++G+ +DG Y+
Sbjct: 65 KSERGVALIRRLVAEADVLIDPFRPGVLEKLSLGPDELCRLNPRLIYGRMTGFRRDGKYA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
MAGHDINYL +SG L +LG + P PP N+ ADF GGG M GI+MA+ R SGRG
Sbjct: 125 LMAGHDINYLAVSGTLGMLGRDDEKPHPPWNILADFAGGGAMLFEGILMAIISRQSSGRG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV++ NMV+GS+YL ++ T + + RG NLLDGGA FYDTYET DG+++AVGALE
Sbjct: 185 QVVEANMVDGSSYLTTFPRMALKTIMGNSGRGNNLLDGGAPFYDTYETSDGKYVAVGALE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAK-----LTEKFKEKTQAEWCEIFDNTDACVTP 293
+F+A LL+GL + + ++ GR +T++F+ KT+A+W +FD TDAC TP
Sbjct: 245 PKFFAALLSGLELAGQGWEDDQLNRGRWPELRHLMTDRFRSKTRAQWELVFDGTDACCTP 304
Query: 294 VLSLSQATSHP 304
VL S+ + P
Sbjct: 305 VLEYSELENDP 315
>gi|409392168|ref|ZP_11243776.1| alpha-methylacyl-CoA racemase [Gordonia rubripertincta NBRC 101908]
gi|403197927|dbj|GAB87010.1| alpha-methylacyl-CoA racemase [Gordonia rubripertincta NBRC 101908]
Length = 369
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 220/336 (65%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G P D + G++ + NLK
Sbjct: 15 LSSIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGTLPKPGVNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + +L ++DVI+E FR GVME+L GPD L + NP L+Y R++G+GQDGP ++
Sbjct: 75 DETDRATILDLVAKADVIIEGFRPGVMERLGFGPDDLTEVNPGLVYGRMTGWGQDGPRAN 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G ++ P PP NLA DFGGG + +G++ AL ER SG+GQ
Sbjct: 135 LAGHDINYISLTGLLHAIGRKDDRPVPPLNLAGDFGGGSMFLVVGVLAALLERGISGKGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWSDTRGTNMLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELP-QHEVET-GRAK--LTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GLG+ + +LP Q+++ G+ K TE FK +T+ EW ++FD TDAC +PVL
Sbjct: 255 QFYAELLKGLGLADADLPAQNDIANWGKLKEIFTETFKSRTRDEWAKVFDGTDACTSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A + PH R + + + GV APR SRT
Sbjct: 315 TFAEAPADPHMAARANLV-DIDGVTQAQVAPRFSRT 349
>gi|389863937|ref|YP_006366177.1| alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Modestobacter marinus]
gi|388486140|emb|CCH87690.1| Putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Modestobacter marinus]
Length = 381
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/366 (42%), Positives = 226/366 (61%), Gaps = 11/366 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E GL PAPF M+L + GA V+RID+ GA+PF D + G++S+ ++L
Sbjct: 6 LAGLRVVELTGLGPAPFAAMLLADLGADVLRIDRPGARPFTGSTEHDLLARGRRSVAVDL 65
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G ++++ LA ++DV+LE FR GV E+L +GP+ NPRL+Y R++G+GQ+GP S
Sbjct: 66 KHPDGPALVRTLAERADVLLEGFRPGVTERLGIGPEECLARNPRLVYGRMTGWGQEGPLS 125
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+ AGHD+ Y+ ++G L +G P P NL DFGGG + +G++ AL E SGRG
Sbjct: 126 ATAGHDLGYIAVTGALHAIGRAGGPPQVPLNLVGDFGGGAMYLVVGVLAALLEARVSGRG 185
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + LW RG NLLD G +YD +ET DGR +AV ALE
Sbjct: 186 QVVDAAIVDGTAHLATMVVGMLGGGLWRDERGVNLLDSGVPWYDVHETADGRHLAVAALE 245
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG--RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
QFYA+L+ LG+ + + + R + + + +T+ EW E+F +DACV PVLS
Sbjct: 246 PQFYAELVDRLGIADVAPDRAGADPAVLRGLIGDAVRRRTRDEWVEVFAGSDACVAPVLS 305
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRHF 355
++A HPH R +++ + GVV PAPAPR SRTP + PA G HTRE L +
Sbjct: 306 FAEAREHPHLAARQTYVEHH-GVVQPAPAPRFSRTPAA---LDRPPARAGEHTREALADW 361
Query: 356 GYSDAN 361
G D +
Sbjct: 362 GVEDVD 367
>gi|78060606|ref|YP_367181.1| alpha-methylacyl-CoA racemase [Burkholderia sp. 383]
gi|77965156|gb|ABB06537.1| Alpha-methylacyl-CoA racemase [Burkholderia sp. 383]
Length = 384
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/366 (44%), Positives = 225/366 (61%), Gaps = 13/366 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQ--DTVGYGKKSLCI 56
L GI ++E G+ P PFC M+L++ GA +IRID+ G QP + + G++S +
Sbjct: 8 LAGIRIVELGGVGPVPFCCMLLSDLGAEIIRIDRPPGYDGGQPGDPRFNLLNRGRRSAAL 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LKKA + + L Q+D ++E FR GV EKL LGPD +NP L+Y R++G+GQ GP
Sbjct: 68 DLKKAASTAAILKLVGQADALVEGFRPGVAEKLGLGPDACLAANPSLVYGRMTGWGQQGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ GHDINY+ LSG+L +G P P NLA DFGGG L ALG+V A+ E +SG
Sbjct: 128 LAQAPGHDINYISLSGVLHSVGAAGGPPVIPLNLAGDFGGGSLYLALGVVSAILESKRSG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+GSA L + + W RG N LD GA +Y+ YET+DGR++++G+
Sbjct: 188 KGQVVDAAMVDGSASLMTLFYGMLASGYWKDERGSNRLDSGAPWYNVYETRDGRWISIGS 247
Query: 237 LESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
ES+F+ L LG+ EEE+P QH+ AK F +T+ EWC + + D C+
Sbjct: 248 NESRFWRNTLEMLGLPEEEMPDQHDRSRWPEVHAKFAALFLTRTRDEWCALAEGRDVCIA 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLS+++A HPH R +FI R GVV PAPAPR SRTPG +I PG HT EVL
Sbjct: 308 PVLSMAEAPDHPHLRARQTFI-ERDGVVQPAPAPRFSRTPG--EIQSSPTLPGEHTDEVL 364
Query: 353 RHFGYS 358
+G++
Sbjct: 365 GDWGFT 370
>gi|311104892|ref|YP_003977745.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310759581|gb|ADP15030.1| CoA-transferase family III family protein 12 [Achromobacter
xylosoxidans A8]
Length = 376
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 222/375 (59%), Gaps = 10/375 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINLKK 60
L G TV+E AG+ P PFC M+L + GA VIRID+ G + G++++ ++LK+
Sbjct: 5 LSGFTVVEMAGIGPGPFCAMMLADMGADVIRIDRLTPGFLGGGGTIIDRGRRTIALDLKQ 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++ L +++D +LE FR GVME+L LGP+ NPRL+Y R++G+GQDGP +
Sbjct: 65 PGATDIVLRLLDRADALLEGFRPGVMERLGLGPEQCLARNPRLVYGRMTGWGQDGPLAQA 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY+ ++G L +G PTPP +L D GGG +M A G++ L E ++GRGQV
Sbjct: 125 AGHDLNYIAITGALHAMGHAGLPPTPPLHLVGDMGGGAMMLAFGVLCGLLEAGRTGRGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D + +G++ L S + W R N+LDGGAHFY Y DG+++++GA+E Q
Sbjct: 185 VDAAICDGASLLASAYHGKLQSGDWVNQRQANMLDGGAHFYGCYACADGKYVSIGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY LL G+ + + Q + RAKL KT+ +WC + + TDAC PVL
Sbjct: 245 FYRLLLERCGIDDPDFQQQWERAQWPPLRAKLAGIIAGKTREQWCALLEGTDACFAPVLD 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+A HPH+ RGSFI G+V PAPAPRLSRTPG + PAPG HT E+L G
Sbjct: 305 FEEAPQHPHHRARGSFI-ETGGIVHPAPAPRLSRTPGQAGAV---PAPGAHTEELLAELG 360
Query: 357 YSDANIEELIREDVI 371
+ A I+ L I
Sbjct: 361 LAQAEIQALRERGAI 375
>gi|407782555|ref|ZP_11129766.1| L-carnitine dehydratase/bile acid-inducible protein [Oceanibaculum
indicum P24]
gi|407205581|gb|EKE75551.1| L-carnitine dehydratase/bile acid-inducible protein [Oceanibaculum
indicum P24]
Length = 393
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 226/374 (60%), Gaps = 13/374 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L G+ +LEFAG+ PAPFC M+L + GA V+R+D+ +P + + G++S+ I
Sbjct: 10 LAGLRILEFAGIGPAPFCAMLLADMGAEVVRLDRLEPSGLGIPKPARFELMNRGRRSVAI 69
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ +G+++ NL ++D ++E FR G ME+L LGP+ NP+L+Y RL+G+GQDGP
Sbjct: 70 DLKRPEGVALALNLVERADALIEGFRPGTMERLGLGPEACLARNPKLVYGRLTGWGQDGP 129
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+G+L+ +G PTPP NL DFGGGG++ A G+V AL E SG
Sbjct: 130 LAHSAGHDMNYIALAGMLAGIGREGAPPTPPLNLVGDFGGGGMLLAFGLVCALLEARHSG 189
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A LG+ + + D PRG NLLD GA Y+ YE DG+++AV
Sbjct: 190 KGQVVDAAMVDGVALLGTMFFGLRAAGMHDAPRGRNLLDSGAPHYEVYECADGKYVAVAP 249
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVE----TGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E++F +LL +G + P E + L +F+EK +A+WC + + TD+C
Sbjct: 250 IEAKFRRELLQRIGFDPQRFPDVEDSATWPAAKQLLAARFREKNRADWCALLEGTDSCFA 309
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL + +A HPHN R +F P G+ PAPAPR SRT + A G +R VL
Sbjct: 310 PVLEMDEAPEHPHNRARDAF-PVIGGIAQPAPAPRFSRT--APPLPTAPIAAGADSRAVL 366
Query: 353 RHFGYSDANIEELI 366
+ + IE L
Sbjct: 367 ADWNIDASRIEALF 380
>gi|398807304|ref|ZP_10566185.1| putative acyl-CoA transferase/carnitine dehydratase [Variovorax sp.
CF313]
gi|398089801|gb|EJL80306.1| putative acyl-CoA transferase/carnitine dehydratase [Variovorax sp.
CF313]
Length = 370
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 207/334 (61%), Gaps = 6/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+G+ V+E AG+ P PFC M+ + GA VIRI + G QP D + G+ +L +L+
Sbjct: 5 LQGLRVIEMAGIGPGPFCAMLFADMGAEVIRIARPGTQPDAHDILARGRSTLQADLRTEG 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ + ++DV++E FR GVME+L LGP NPRL+Y R++G+GQ GP + AG
Sbjct: 65 AAQSVLDAVEKADVLIEGFRPGVMERLGLGPAPCHARNPRLVYGRMTGWGQHGPLAHAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ +SG L +G P PP N DFGGG ++ A GI+ AL E +SG+GQV+D
Sbjct: 125 HDINYIAISGALHAIGRAGEPPVPPLNYVGDFGGGAMLLAFGILAALHEAKQSGQGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + + + W RGEN+LDGGAHFYDTY DGR++AVGA+E QFY
Sbjct: 185 AAMADGAALLSAMMYGLKSAGRWSNQRGENMLDGGAHFYDTYACADGRYVAVGAIEPQFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A L G+ ++ +++ R ++ + F+ +T+ EWC + + +DAC PVL
Sbjct: 245 ALLRERCGIADDPAFDAQMDADRWPLLKLRMADLFRTRTRDEWCVLLEGSDACFAPVLDW 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+A HPHNV RG+F N GVV PAPAPR SRT
Sbjct: 305 DEAPEHPHNVARGTFA-NVGGVVQPAPAPRFSRT 337
>gi|383778968|ref|YP_005463534.1| putative fatty acid-CoA racemase [Actinoplanes missouriensis 431]
gi|381372200|dbj|BAL89018.1| putative fatty acid-CoA racemase [Actinoplanes missouriensis 431]
Length = 360
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/334 (47%), Positives = 215/334 (64%), Gaps = 6/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E AGLAP PF MIL + GA V+ +D+ G + + ++ + ++LK +
Sbjct: 9 LHGIKVVELAGLAPGPFGCMILADLGADVVLVDRPGGT-GLPGPLQRSRRVVTLDLKSDE 67
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + +L Q+DV++E +R GV E+L GPD + NPRL+Y R++G+GQ GP ++ AG
Sbjct: 68 GREALLSLIAQADVLVEGYRPGVAERLGFGPDACLELNPRLVYGRMTGWGQTGPLAAAAG 127
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDI+YL ++G L LG + P P NL ADF GGG++ A+GI+ AL ER +S RGQV+D
Sbjct: 128 HDIDYLAIAGALEPLGRPGQPPHAPINLLADFAGGGMLLAVGILAALHERERSQRGQVVD 187
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+GSA L ++L +W RGENLLDGGA FYDTY DG ++AVGALE QFY
Sbjct: 188 AAMVDGSALLMTFLHGMIAGGMWRGGRGENLLDGGAPFYDTYRASDGGYLAVGALEPQFY 247
Query: 243 AQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A LL GLG+ E LP + E R TE+F +T+ EW +F DACV+PVL+ +
Sbjct: 248 AALLQGLGLAEANLPAQMNRSEWPELRRIFTERFATRTRDEWAAVFAELDACVSPVLTPA 307
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A HPHN RG+F+ GV PAPAPR +RTP
Sbjct: 308 EAAEHPHNAIRGTFV-EVNGVRQPAPAPRFARTP 340
>gi|148554525|ref|YP_001262107.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
gi|148499715|gb|ABQ67969.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
Length = 372
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 213/335 (63%), Gaps = 6/335 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-PFVQDTVGYGKKSLCINLKKA 61
L G+ VLEFAG+ P PFC M+L++ GA V+RID+ G + + + G++S+ I+LK
Sbjct: 7 LHGVRVLEFAGIGPTPFCAMLLSDLGADVLRIDRPGTPGAYATEVLARGRRSIAIDLKDK 66
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G+ + LA +DV++E FR GVME+L LGP+ + + NPRL+Y R++G+GQ GP + +A
Sbjct: 67 AGIEACRELARSADVLIEGFRPGVMERLGLGPEEMAEINPRLVYGRMTGWGQTGPLAKVA 126
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ ++G L +G +R PTPP NL DFGGG L ALGIV AL ER +S GQVI
Sbjct: 127 GHDINYIAITGALGAIGPADRPPTPPLNLLGDFGGGSLYLALGIVSALLERERSQLGQVI 186
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D +V+G A L + RG+N+LDG A++Y YE DG+++AVGA E F
Sbjct: 187 DAAIVDGVASLFGMHAGFVGAGMAGG-RGQNMLDGSANYYRCYECADGKYVAVGAFEPHF 245
Query: 242 YAQLLAGLGMTEEEL---PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
YA LL +G+ L Q + E+ A+L+E F +TQ EW E+ + TDAC PVLS
Sbjct: 246 YALLLESMGLDAPALKSQSQEDWESVGARLSEIFLTRTQREWSEMLEGTDACFAPVLSFE 305
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
A HPH R S++ G+ PAPAPR SRTPG
Sbjct: 306 DAVKHPHMAARNSYV-TAFGITQPAPAPRFSRTPG 339
>gi|426408978|ref|YP_007029077.1| alpha-methylacyl-CoA racemase [Pseudomonas sp. UW4]
gi|426267195|gb|AFY19272.1| alpha-methylacyl-CoA racemase [Pseudomonas sp. UW4]
Length = 384
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/377 (44%), Positives = 234/377 (62%), Gaps = 19/377 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQ----DTVGYGKKSL 54
L GI V+EF + PAPF M+L + GA V+RID+ P ++ D G ++S+
Sbjct: 4 LSGIRVVEFEAIGPAPFGTMLLADMGADVVRIDRPQKASDLGPKLEGKRADITGRNRRSV 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK+ ++ L ++DV++E FR G ME+L LGPD+ + NPRL+YAR++G+GQ
Sbjct: 64 TLDLKRPDSVAAALELIERADVVIEGFRPGTMERLGLGPDIALERNPRLVYARMTGWGQT 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHD+NY+ LSG+LS +G P PP NL D+GGGG++ A+G++ AL +
Sbjct: 124 GPMADRAGHDLNYIALSGVLSSIGPAGGRPVPPLNLVGDYGGGGMLLAMGVLAALVNVQR 183
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
G GQV+D M EG+A LGS + W + RG NLLDGGA +YDTYET+DG++MA+
Sbjct: 184 GGAGQVVDAAMTEGAAQLGSVIWGLLAGGHWKEQRGSNLLDGGAPWYDTYETRDGQYMAI 243
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDAC 290
G +ES+FYAQ+L LG++ +LP + G +L E F +T+ +W F+ +DAC
Sbjct: 244 GPIESRFYAQMLEILGLSNADLPNQHDQAGWPRLREAFTAAFLGRTREQWVAAFEGSDAC 303
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHT 348
V PVL L +AT HPH V RGSFI GVV P PAPR TP + PAP G H
Sbjct: 304 VAPVLGLVEATRHPHGVARGSFI-EVDGVVQPVPAPRFLGTPS----AQPQPAPERGEHG 358
Query: 349 REVLRHFGYSDANIEEL 365
+ LR +GY A IE L
Sbjct: 359 GDALRDWGYDTAAIERL 375
>gi|312199431|ref|YP_004019492.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
gi|311230767|gb|ADP83622.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
Length = 387
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/381 (43%), Positives = 234/381 (61%), Gaps = 17/381 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG---AQPFVQDTVGYGKKSLCINLK 59
L G+ VL GL P PFCGM+L + GA VIR+D+ G + P V + G++S+ ++ K
Sbjct: 11 LAGVRVLMMGGLGPGPFCGMLLGDLGAEVIRVDRPGEVDSPPPVDVVMRRGQRSIALDAK 70
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G V+ LA ++D ++ +R GV E+L +GP+ L NPRL+YAR++GYGQDGPY+
Sbjct: 71 DERGREVIHALAERADAFVDVYRPGVAERLGIGPNDLRARNPRLVYARMTGYGQDGPYAQ 130
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ LSG L G R P PP N+ DFGGGG++ A+G++ + E ++SG GQ
Sbjct: 131 LAGHDINYIALSGALHATGPAER-PVPPLNVLGDFGGGGMLLAVGLLSGIVEAARSGSGQ 189
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M++GSA L + W R NL DGGAHFY TYET DG+ AVGALE
Sbjct: 190 VVDVAMLDGSATLMAVFYGMLAQGSWRDRREANLTDGGAHFYRTYETADGKHFAVGALEG 249
Query: 240 QFYAQLLAGLGMTEEELPQ----HEVETGRAK-LTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FYA+L A LG+ E+PQ HE ++ + +F+E+T+AEW ++C +PV
Sbjct: 250 RFYAELCARLGI---EVPQDYDDHEAWDKHSEVMAARFRERTRAEWERELVTPESCASPV 306
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL++A HP NV RG+F+ GVV PAP+PR S+TP PA PG T +VL
Sbjct: 307 LSLAEAPGHPQNVARGTFV-EVDGVVQPAPSPRFSKTP---PAPPGRPALPGDQTVDVLA 362
Query: 354 HFGYSDANIEELIREDVIEET 374
G + L+ + V ++
Sbjct: 363 ELGLDHDAVRRLLADGVARQS 383
>gi|377811182|ref|YP_005043622.1| alpha-methylacyl-CoA racemase [Burkholderia sp. YI23]
gi|357940543|gb|AET94099.1| Alpha-methylacyl-CoA racemase [Burkholderia sp. YI23]
Length = 384
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 228/373 (61%), Gaps = 13/373 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQ--DTVGYGKKSLCI 56
L GI ++E G+ P PFC M+L++ GA +IRID+ G QP + + G++S +
Sbjct: 8 LAGIRIVELGGVGPVPFCCMLLSDLGADIIRIDRPPGYDGGQPGDPRFNLLNRGRRSAAL 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LKK + + L Q+D ++E FR GV EKL LGPD +NP L+Y R++G+GQ GP
Sbjct: 68 DLKKKEAADAILKLVGQADALVEGFRPGVAEKLGLGPDACLAANPALVYGRMTGWGQHGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ GHDINY+ LSG+L +G P P NLA DFGGG L ALG+V A+ E +SG
Sbjct: 128 LAHAPGHDINYISLSGVLHSVGVAGGPPVIPLNLAGDFGGGSLYLALGVVSAILESKRSG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+GSA L + + W RG N LD GA +Y+ YET+DGR+++VG+
Sbjct: 188 KGQVVDAAMVDGSASLMTLFYGMLASGYWKDERGSNRLDSGAPWYNVYETRDGRWLSVGS 247
Query: 237 LESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E++F+ L+ LG+ EEE+P QH+ A+ F+ +T+ EWC + + D C+
Sbjct: 248 NEARFWRNTLSMLGLREEEMPDQHDRSRWPEVHARFAAIFRTRTRDEWCALAEGLDVCIA 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PV+SL++A HPH R +F+ R GVV PAPAPR SRTPG +I PG HT EVL
Sbjct: 308 PVMSLAEAPEHPHLRARQTFV-ERDGVVQPAPAPRFSRTPG--EIQSGPALPGEHTDEVL 364
Query: 353 RHFGYSDANIEEL 365
+G++ + L
Sbjct: 365 GDWGFTAVELATL 377
>gi|397732885|ref|ZP_10499611.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
gi|396931303|gb|EJI98486.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
Length = 395
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 12/378 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV--QDTVGYGKKSLCINLKK 60
L G+ VLE G+ P PF M+L++ GA V+R+D+ G + + D + G++S+ ++L++
Sbjct: 18 LTGLKVLELGGIGPGPFAAMLLSDMGADVVRVDRPGPESGLGATDVLQRGRRSVVLDLRR 77
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ ++V+ L Q+DV++E +R GV E+L +GPD NPR++Y R++G+GQ GP++ M
Sbjct: 78 DESVTVLLQLVEQADVLIEGYRPGVAERLGVGPDTCLARNPRIVYGRMTGWGQSGPWAQM 137
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G L +G P P N+ DFG G +G++ AL+E SGRGQV
Sbjct: 138 AGHDINYVALTGALHAIGRAGEPPAVPVNMLGDFGAGSTYLVMGVLAALWESRSSGRGQV 197
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +V+G+A L + L W RG NLLD G +YD YET DGR+M VGALES+
Sbjct: 198 VDAAIVDGAASLTTMLHGMLHAGSWKDERGVNLLDTGRPWYDVYETSDGRWMTVGALESK 257
Query: 241 FYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
FY Q + LG+ E+ + + + R + E+F+ KTQ EW +F+ TDACV PVL+L
Sbjct: 258 FYGQFVTLLGLPEQFARRPKSDGWPELRKHIAERFRSKTQTEWTAVFECTDACVAPVLTL 317
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP-GVHTREVLRHFG 356
+A HPH R +F+ + AGV PAPAPR RTPG + PA G HT EVL +G
Sbjct: 318 GEAAEHPHLRERQTFV-DIAGVRQPAPAPRFDRTPGA---VQRRPARLGEHTLEVLTDWG 373
Query: 357 YSDANIEELIREDVIEET 374
+ELI + T
Sbjct: 374 LEGG--QELIARGIAGNT 389
>gi|254820698|ref|ZP_05225699.1| Mcr [Mycobacterium intracellulare ATCC 13950]
Length = 360
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 217/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
LKG+ V+E AG+ P P MIL + GA V+RID+ + P +D + ++ + +LK
Sbjct: 5 LKGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSGPGGVAKDAMMRNRRVVTADLKS 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L ++DV++E +R GV E+L LGP+ K N RL+YAR++G+GQ GP S
Sbjct: 65 DEGRGLVLKLIAKADVLIEGYRPGVTERLGLGPEDCAKVNDRLVYARMTGWGQTGPRSQQ 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 125 AGHDINYISLNGILHSIGRVNERPVPPLNLVGDFGGGSMFLLLGILSALWERQTSGKGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 185 VDAAMVDGSSVLVQMMWQMRSSGMWTDARGTNLLDGGAPYYDTYECADGRYVAVGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTPVL+
Sbjct: 245 FYAAMLAGLGLDGADLPGQNDVGRWPELRAVLTEKFASQDRDHWAKVFADSDACVTPVLA 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 305 FGEVQTEPHITERDTFYEVDGG-LQPRPAPRFSRT 338
>gi|379753206|ref|YP_005341878.1| mcr [Mycobacterium intracellulare MOTT-02]
gi|378803422|gb|AFC47557.1| mcr [Mycobacterium intracellulare MOTT-02]
Length = 360
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 217/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
LKG+ V+E AG+ P P MIL + GA V+RID+ + P +D + ++ + +LK
Sbjct: 5 LKGLRVIELAGIGPGPHAAMILGDLGADVVRIDRPSSGPGGVAKDAMMRNRRVVTADLKS 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L ++DV++E +R GV E+L LGP+ K N RL+YAR++G+GQ GP S
Sbjct: 65 DEGRGLVLKLIAKADVLIEGYRPGVTERLGLGPEDCAKVNDRLVYARMTGWGQTGPRSQQ 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 125 AGHDINYISLNGILHSIGRVNERPVPPLNLVGDFGGGSMFLLLGILSALWERQTSGKGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 185 VDAAMVDGSSVLVQMMWQMRSSGMWTDARGTNLLDGGAPYYDTYECADGRYVAVGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTPVL+
Sbjct: 245 FYAAMLAGLGLDGADLPGQNDVGRWPELRAVLTEKFAGQDRDHWAKVFSDSDACVTPVLA 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 305 FGEVQTEPHITERDTFYEVDGG-LQPRPAPRFSRT 338
>gi|302911011|ref|XP_003050399.1| hypothetical protein NECHADRAFT_49211 [Nectria haematococca mpVI
77-13-4]
gi|256731336|gb|EEU44686.1| hypothetical protein NECHADRAFT_49211 [Nectria haematococca mpVI
77-13-4]
Length = 402
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/314 (50%), Positives = 213/314 (67%), Gaps = 11/314 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L GI VLEFAGLAP PF GM+L + GA+V+RID+ +D + K S+ ++L
Sbjct: 7 LHGIKVLEFAGLAPGPFAGMLLADAGASVLRIDRAQGTSARAVPTEDMLARHKTSITVDL 66
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G++++K LA+++DVI++PFR GV+EKL LGPD LC NPRLIY R++G+ +DG Y+
Sbjct: 67 KSPRGVALVKRLASKADVIIDPFRPGVLEKLGLGPDELCALNPRLIYGRMTGFRRDGKYA 126
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
MAGHDINYL +SG+L +LG P PP N+ ADF GGG + G++MA+ R SGRG
Sbjct: 127 LMAGHDINYLAVSGVLGMLGREGEKPHPPWNILADFAGGGAVLFQGVLMAIIARHSSGRG 186
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV++ NMV+GSAYL ++ T L ++ RG NLLDGG +YDTYET DG++M+VGALE
Sbjct: 187 QVVEANMVDGSAYLATFPRMALKTPLGERGRGRNLLDGGCPWYDTYETSDGKYMSVGALE 246
Query: 239 SQFYAQLLAGLGMTEE--ELPQHEV----ETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
QF+A L+ GL + + E +H+ E R + EKFK K++AEW IFD TDAC T
Sbjct: 247 PQFFAALIKGLDLEGQGWEAKRHDTSLWSELERL-MGEKFKSKSRAEWEVIFDGTDACCT 305
Query: 293 PVLSLSQATSHPHN 306
PVL S+ S P
Sbjct: 306 PVLEYSELESDPKR 319
>gi|383831166|ref|ZP_09986255.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora xinjiangensis XJ-54]
gi|383463819|gb|EID55909.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora xinjiangensis XJ-54]
Length = 383
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/371 (44%), Positives = 227/371 (61%), Gaps = 11/371 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQDTVGYGKKSLCINL 58
L G+ V+E AGLAPAPF IL + GA V+RID+ +D + G++++ +N
Sbjct: 9 LSGLRVVELAGLAPAPFACTILADLGADVVRIDRVTEGEDVLAMPKDPLLRGRRTIGVNT 68
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G+ V+ LA ++DV +E FR GV E++ LGP + NPR++Y R++G+GQDGP +
Sbjct: 69 KTPEGVEVVLRLAERADVFVEGFRPGVTERMGLGPSDVHARNPRVVYGRITGWGQDGPLA 128
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+GLSG L +G R P PP N ADFGGGG+ A+G++ ALFER SGRG
Sbjct: 129 HTAGHDINYIGLSGALHPIGRRGERPVPPVNFLADFGGGGMYLAMGVLAALFERQTSGRG 188
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +MV+GSA L + L + + LW+ RGEN+LDGGA FYDTYET DGR++AVGA+E
Sbjct: 189 QVVDASMVDGSALLTTHLFGLRASGLWEGERGENILDGGAPFYDTYETADGRYVAVGAIE 248
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
++F+A L L + +P H T R L + ++T+ E + TDAC+TPV
Sbjct: 249 TKFFAALAEVLELDPGTVPSHLDPTQWPRLREVLADAIGKRTRDELVARAEGTDACLTPV 308
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LS +A HPHN R +F+ + GVV PAP P+ RT + G T VL
Sbjct: 309 LSPWEAPEHPHNAARATFV-DIGGVVQPAPGPKFDRT--PPETPRPPHPRGADTAGVLEE 365
Query: 355 FGYSDANIEEL 365
G+ I L
Sbjct: 366 LGFDGDEIRSL 376
>gi|75859128|ref|XP_868904.1| hypothetical protein AN9522.2 [Aspergillus nidulans FGSC A4]
gi|40747587|gb|EAA66743.1| hypothetical protein AN9522.2 [Aspergillus nidulans FGSC A4]
gi|259481021|tpe|CBF74177.1| TPA: isopenicillin N-CoA epimerase, putative (AFU_orthologue;
AFUA_5G03740) [Aspergillus nidulans FGSC A4]
Length = 380
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 208/305 (68%), Gaps = 8/305 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
+ L G+ V+E AGLAP PF G++L ++GA+V+RID+ + D + GK S+ ++L+
Sbjct: 5 LPLAGLRVVELAGLAPGPFAGLLLADYGASVLRIDR--PKSISADQLTRGKSSIILDLRD 62
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSS 119
++ L + +DV+++P+R GV+E+L L P DVL K NPRLI AR++G+ +DG Y
Sbjct: 63 PASHKLLLELLSNADVLIDPYRPGVLERLGLSPKDVLLKRNPRLIVARMTGFRRDGKYKD 122
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINY+ +SG+LS+LG P P N+ DF GGG +C GI++AL R+ +GRGQ
Sbjct: 123 MAGHDINYIAVSGVLSMLGRAGEKPYAPGNILGDFAGGGAVCFQGILLALLSRATTGRGQ 182
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALE 238
V++ NMV+GSAYL + T LW PRG N+LDGG+ FYDTYETKD G++ +VGALE
Sbjct: 183 VVEANMVDGSAYLAAMPRLNMQTPLWSGPRGTNMLDGGSPFYDTYETKDTGKYFSVGALE 242
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA L+ GLG +ELP E + RA T++FKEKT+AEW +FD TDAC TPV
Sbjct: 243 PQFYAALIKGLGFQPDELPSREDRSNWPALRAAFTKRFKEKTRAEWEAVFDGTDACATPV 302
Query: 295 LSLSQ 299
L S+
Sbjct: 303 LEQSE 307
>gi|319795899|ref|YP_004157539.1| L-carnitine dehydratase/bile acid-inducible protein f [Variovorax
paradoxus EPS]
gi|315598362|gb|ADU39428.1| L-carnitine dehydratase/bile acid-inducible protein F [Variovorax
paradoxus EPS]
Length = 367
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/366 (42%), Positives = 221/366 (60%), Gaps = 12/366 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+G+ V+E AG+ P PFC M+ + GA V+RI++ G + D + G+ +L I+L+
Sbjct: 5 LQGLRVIEMAGIGPGPFCAMLFADMGAEVVRIERPGTRTAPHDILARGRSTLQIDLRAEG 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ + ++DV++E FR GVME+L LGP NPRL+Y R++G+GQ GP S AG
Sbjct: 65 AAENVLDAIAKADVLIEGFRPGVMERLGLGPTECHARNPRLVYGRMTGWGQHGPLSHAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ +SG L +G P PP N DFGGG ++ A GI+ AL E SG+GQV+D
Sbjct: 125 HDINYIAISGALHAIGRAGEPPVPPLNYVGDFGGGAMLLAFGILAALHEAKGSGQGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S + + +W RGEN+LDGGAHFYDTY DG+++AVGA+E QFY
Sbjct: 185 AAMTDGAALLSSMMYGFKSAGMWSNQRGENMLDGGAHFYDTYACADGKYVAVGAIEPQFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A L G+ ++ +++ R ++ + F+ +T+ EWC + + +DAC PVL
Sbjct: 245 ALLRERCGIADDTAFDAQMDADRWPLLKLRMADLFRTRTRDEWCVLLEGSDACFAPVLDW 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVLRHFG 356
+A +HPHNV RG+F N GVV PAPAPR SRT P T H+ +LR +G
Sbjct: 305 DEAPAHPHNVARGTFA-NVGGVVQPAPAPRFSRTAPVMPPATAHD-----DGEAMLRRWG 358
Query: 357 YSDANI 362
+ A +
Sbjct: 359 ATVAPV 364
>gi|430808615|ref|ZP_19435730.1| alpha-methylacyl-CoA racemase [Cupriavidus sp. HMR-1]
gi|429499002|gb|EKZ97467.1| alpha-methylacyl-CoA racemase [Cupriavidus sp. HMR-1]
Length = 388
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 230/376 (61%), Gaps = 16/376 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---------DTVGYGKKS 53
L GI V+EF + P PF M+L + GA V+RID+ A + D G G++S
Sbjct: 4 LSGIRVIEFEAIGPGPFGAMLLADMGADVLRIDRPVAPTDLGPKRGPGKRIDVTGRGRRS 63
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+ I+LK+ +G L ++DV++E FR G ME+L LGP + NPRLIY R++G+GQ
Sbjct: 64 VTIDLKQPQGQQAALELIAKADVVIEGFRPGTMERLGLGPAIALARNPRLIYGRMTGWGQ 123
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP + AGHD+NY+ LSG+LS +G P PP NL D+GGGG++ ALG+V AL
Sbjct: 124 TGPMADRAGHDLNYIALSGVLSGIGRAGEAPVPPLNLVGDYGGGGMLLALGVVSALLNVH 183
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
+ G+GQV+D M+EG+A LG+ + + W + RG N LDGG +YD+Y T+DG++M+
Sbjct: 184 RGGKGQVVDAAMIEGAAQLGAVIWGLIASGNWRESRGSNFLDGGTPWYDSYCTRDGQYMS 243
Query: 234 VGALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDA 289
VGA+ES+FYA+L+ LG+ E LP G R + TE F +T+ EWC +FD +DA
Sbjct: 244 VGAVESRFYAELIEKLGLAGETLPGQHDRAGWPILRRRFTEVFLTRTRDEWCAVFDGSDA 303
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
CV PVL S+A HP + RGSFI GVV P PAPR TP S++ PA G H
Sbjct: 304 CVAPVLGFSEAPDHPQHRARGSFI-EVDGVVQPGPAPRFLGTP--SEVRHAAPARGQHGG 360
Query: 350 EVLRHFGYSDANIEEL 365
LR +G+ DA I L
Sbjct: 361 AALREWGFDDAAIARL 376
>gi|340385519|ref|XP_003391257.1| PREDICTED: alpha-methylacyl-CoA racemase-like [Amphimedon
queenslandica]
Length = 461
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 224/368 (60%), Gaps = 8/368 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH--GAQPFVQDTVGYGKKSLCINLKK 60
L+G+ ++E AGL P PF M+L + GA VIRID+ + QD + G++S+ ++LKK
Sbjct: 91 LEGVRIIELAGLGPGPFAAMVLADMGARVIRIDRRSDAGRGSRQDALKRGRRSIALDLKK 150
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ + V+ LA +SD ++E FR GV E+L LGP+ + + NP L+YAR++G+GQ GP +
Sbjct: 151 PEAVEVVLRLAERSDALIEGFRPGVTERLGLGPEAVGERNPSLVYARVTGWGQTGPLAPS 210
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSG L+ + + P PP NL DFGGGG+ ALG+V + E SG+GQV
Sbjct: 211 AGHDINYIALSGALAAIARPGQAPLPPLNLVGDFGGGGMFLALGVVAGVMEARASGKGQV 270
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D M E SA L + + +W G NLLDGGAHFYDTY +DG+++A+G++E +
Sbjct: 271 VDVAMTEASATLMTMIYAMYAQGMWSLEPGANLLDGGAHFYDTYRCRDGKYIALGSIEPR 330
Query: 241 FYAQLLAGLGMT---EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
FYA+L G+ E + + + KL KT+ EWC++ + +D C PVL +
Sbjct: 331 FYAELREKAGLDDSFEASMDRKAWPELKGKLAAIIARKTRREWCDLMEGSDVCFAPVLDM 390
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
++A HPH++ R SF+ AG V PAP P+ SRT +I G H++E+L G+
Sbjct: 391 AEAPRHPHHIARRSFV-EIAGTVQPAPTPKFSRT--ECEIRSPPALAGEHSQEILEELGF 447
Query: 358 SDANIEEL 365
I+ L
Sbjct: 448 GADEIQSL 455
>gi|317506147|ref|ZP_07963970.1| CoA-transferase family III [Segniliparus rugosus ATCC BAA-974]
gi|316255569|gb|EFV14816.1| CoA-transferase family III [Segniliparus rugosus ATCC BAA-974]
Length = 356
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 223/335 (66%), Gaps = 6/335 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI VLEFAG+ P P ++L GA V+R+ + +P D G++++ +L+ +
Sbjct: 6 LTGIRVLEFAGIGPGPHAAVLLANLGADVVRVQRP-TEPLHADQQLRGRRTVVADLRDPE 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
L+ +K+L ++DV++E FR GVME+ LGP+ K NPRL+Y R++G+GQDGP++ AG
Sbjct: 65 QLAKVKSLVERADVLIEGFRPGVMERNGLGPEECAKLNPRLVYGRITGWGQDGPFAPRAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HD+NYLGL+GIL+ +G + P PP N+ ADFGGG + +G++ AL ER +SG GQ +D
Sbjct: 125 HDLNYLGLTGILNAIGPADSPPPPPLNMVADFGGGSMFLVMGVLAALVERGRSGLGQTVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + L ++ +D LW R +NLLDG A FY TYET DG+ +AVGA+E QFY
Sbjct: 185 AAMVDGVSALAHFIWSFRDAGLWTDEREDNLLDGAAPFYRTYETSDGKHIAVGAIEPQFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
AQLLAGLG+ ++LP ++ A+L++ F+ KT+ EW IF++TDAC TPVLS +
Sbjct: 245 AQLLAGLGLEADDLPFQLDKSSWAELSKTFAGIFRTKTRDEWASIFEHTDACTTPVLSFA 304
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
+A HPH RG+ + + G PAPAPR SRT G
Sbjct: 305 EAPLHPHMAARGNLL-DVDGTTLPAPAPRFSRTKG 338
>gi|254487423|ref|ZP_05100628.1| alpha-methylacyl-CoA racemase [Roseobacter sp. GAI101]
gi|214044292|gb|EEB84930.1| alpha-methylacyl-CoA racemase [Roseobacter sp. GAI101]
Length = 383
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/378 (42%), Positives = 223/378 (58%), Gaps = 17/378 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L G+ ++EFAGL P PF M+L + GA VIRI++ G D + +K + I
Sbjct: 7 LHGLRIIEFAGLGPGPFACMMLADHGAEVIRIERPGGTQGGPESDTATDILLRSRKRIAI 66
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
++K A G +V+++L + ++E FR GVME+L LGPD + NP+L+Y R++G+GQ GP
Sbjct: 67 DMKSASGKAVLRDLVATAHGLVEGFRPGVMERLGLGPDDMLALNPKLVYGRMTGWGQTGP 126
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
Y+ MAGHDINY+ LSG L G + PTPP N+ DFGGG +M A G+V AL + G
Sbjct: 127 YAPMAGHDINYIALSGALHAFGRKGEKPTPPINMMGDFGGGAMMLAFGMVSALLHVQRGG 186
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
G VID M +GSA L S + W RG N+LD GAHFYD YET+DG+F+++G
Sbjct: 187 DGTVIDAAMTDGSALLMSMIYSFHGQGWWQDERGVNMLDTGAHFYDVYETRDGKFISLGP 246
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E QFYA++L G+ ++ Q + + R +L KT+ EW + TDAC
Sbjct: 247 IEPQFYAKMLELTGLADDPAMQPQNHSAKWDDMRDRLARVIALKTRDEWDAVMVGTDACY 306
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG-VHTRE 350
PVLSL+ A HPHN R +F+ GV PAPAPR S T T A G HTRE
Sbjct: 307 APVLSLTDAPEHPHNRAREAFL-TAGGVKQPAPAPRYS----TIATTPPEMADGQTHTRE 361
Query: 351 VLRHFGYSDANIEELIRE 368
+L GYS+A I++ + +
Sbjct: 362 ILAQLGYSEAQIQDTLAQ 379
>gi|424863247|ref|ZP_18287160.1| alpha-methylacyl-CoA racemase [SAR86 cluster bacterium SAR86A]
gi|400757868|gb|EJP72079.1| alpha-methylacyl-CoA racemase [SAR86 cluster bacterium SAR86A]
Length = 367
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 224/362 (61%), Gaps = 9/362 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ--DTVGYGKKSLCINLKK 60
LK I +LEF+G+ P P+CGM+L + GA VIRI + Q D K+++ +LK
Sbjct: 4 LKDIKILEFSGIGPGPYCGMLLADLGADVIRISRKETQGLESKYDVHNRSKRTITADLKN 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++ + L Q DV+ E FR GVMEKL LGP+V ++N +L+Y R++G+GQDGP S +
Sbjct: 64 KATVNELLRLIKQVDVVFEGFRPGVMEKLGLGPEVCLEANSKLVYGRMTGWGQDGPMSQL 123
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+GLSG L+ +G ++ PTPP NL D+GGGG+ ALGIV L K+ GQV
Sbjct: 124 AGHDINYIGLSGALNAIGRKDSTPTPPLNLIGDYGGGGMHLALGIVSGLIHSMKTNEGQV 183
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS L S+ ++ W R NLLDG AHFYDTYE KD +++AVG++E Q
Sbjct: 184 VDSAMVDGSLSLMSFFYSLKEMGHWQDGRESNLLDGYAHFYDTYECKDEKYIAVGSIEPQ 243
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVLS 296
FY++LL L +T+E + KL E K K KT++EW +IF ++DACVTPVL
Sbjct: 244 FYSELLKKLEITDEIFQDQHNKDNWPKLKEIMAQKIKLKTRSEWEKIFSDSDACVTPVLD 303
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+S+A ++ HN+ R +F G P+P+PR S+T +I + G ++ + F
Sbjct: 304 MSEAQTNAHNLSRNAFT-EVDGFNQPSPSPRYSKT--KPEIRHNAKKIGTDLEDICKEFD 360
Query: 357 YS 358
S
Sbjct: 361 LS 362
>gi|226362307|ref|YP_002780085.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
gi|226240792|dbj|BAH51140.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
Length = 386
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/382 (41%), Positives = 229/382 (59%), Gaps = 15/382 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH---GAQPFVQDTVGY----GKKSLC 55
L G+ V+E + P P+C M+L++ GA V+RID+ GAQP + + G++S+
Sbjct: 4 LNGMKVVEIGSIGPGPWCAMMLSDMGAEVLRIDRADHVGAQPDGARAIDFVNRRGRRSIA 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G V+ L Q+D ++E R GV E+L +GP+ NPRL+Y R++G+GQ+G
Sbjct: 64 VDLKNPDGAEVVLRLVEQADALIEGSRPGVAERLGIGPEECLARNPRLVYGRMTGWGQEG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + + GHDINYL LSG+L +G R P PP NL DFGGGG++ A GIV + E S+S
Sbjct: 124 PLAQVPGHDINYLALSGMLHAIGPEGR-PVPPLNLVGDFGGGGMLLAFGIVAGVLEASRS 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQV+D MV+G++ LGS + W R N LDGGA FY TYET DG ++AV
Sbjct: 183 GKGQVVDAAMVDGASLLGSMFHGLRQIDAWHDRRESNRLDGGAPFYGTYETSDGLWVAVA 242
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
E +FYA L+ LG++ +ELP ++G R + E F+ +T+ EW + C
Sbjct: 243 GNEPKFYAVLVEALGLSLDELPDQMDQSGWADTRKRFAEIFRTRTRQEWVTRLQALETCF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
+PVL+L +A H H V R +F+P GV+ APAPR RTPG ++T PG HT E
Sbjct: 303 SPVLTLDEALEHEHAVARSAFVP-LDGVLQAAPAPRFGRTPG--QVTLPAARPGEHTDEA 359
Query: 352 LRHFGYSDANIEELIREDVIEE 373
LR +G+ I L ++ IE+
Sbjct: 360 LRDWGFDANEIANLATKNAIEQ 381
>gi|347835319|emb|CCD49891.1| similar to alpha-methylacyl-CoA racemase [Botryotinia fuckeliana]
Length = 423
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/334 (46%), Positives = 209/334 (62%), Gaps = 32/334 (9%)
Query: 3 LKGITVLEFAGLAPA-------------------PFCGMILNEFGATVIRIDK------- 36
L G+ VLEFAGLAP PF G++L ++GA+V+RID+
Sbjct: 7 LTGVRVLEFAGLAPGRCPRITPDSITSPLTSIAGPFAGLLLADYGASVLRIDRAVPNLTH 66
Query: 37 -HGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDV 95
P D + K S+ ++LK G+ +K+L +D+I++PFR GV+EKL L PDV
Sbjct: 67 SSSVPPATADFLTRHKSSIAVDLKANAGIYFVKSLVVHADIIIDPFRPGVLEKLGLSPDV 126
Query: 96 LCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFG 155
L K NPR+I AR++G+ +DG Y MAGHDINY+ +SG LSLLG +N P PP N+ DF
Sbjct: 127 LLKLNPRIILARMTGFRRDGKYKDMAGHDINYIAVSGALSLLGRKNEKPLPPANILGDFA 186
Query: 156 GGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLD 215
GGG GI++AL R KSG+GQV++ NMV+GSAYL ++ T +W+KPRGEN LD
Sbjct: 187 GGGATLFQGILLALLAREKSGKGQVVEANMVDGSAYLVTFPRMLMKTPMWNKPRGENTLD 246
Query: 216 GGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTE 270
G+ FYDTYETKDG++MAVGALE QF+ +L+ GLG+ E ++ + ++ R T
Sbjct: 247 SGSPFYDTYETKDGKYMAVGALEPQFFKELVKGLGLGETDIEETRMDRSTWPEMRETFTR 306
Query: 271 KFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHP 304
FKEK ++EW IFD TDAC TPVL + P
Sbjct: 307 LFKEKARSEWENIFDGTDACCTPVLGFDELEKDP 340
>gi|400537523|ref|ZP_10801045.1| mcr [Mycobacterium colombiense CECT 3035]
gi|400328567|gb|EJO86078.1| mcr [Mycobacterium colombiense CECT 3035]
Length = 360
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 217/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
LKG+ V+E AG+ P P MIL + GA V+RID+ + P +D + ++ + +LK
Sbjct: 5 LKGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSGPGGVAKDAMMRNRRVVTADLKS 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L ++DV++E +R GV E+L LGP+ K N RL+YAR++G+GQ GP S
Sbjct: 65 DEGRGLVLKLIAKADVLIEGYRPGVTERLGLGPEDCAKVNDRLVYARMTGWGQTGPRSQQ 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 125 AGHDINYISLNGILHSIGRANERPVPPLNLVGDFGGGSMFLLLGILSALWERQTSGKGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 185 VDAAMVDGSSVLVQMMWQMRASGMWTDARGTNLLDGGAPYYDTYECADGRYVAVGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTP+L+
Sbjct: 245 FYAAMLAGLGLDGADLPGQNDVSRWPELRAVLTEKFASQDRDHWAKVFADSDACVTPILA 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 305 FGEVLTEPHITERNTFYEVDGG-LQPLPAPRFSRT 338
>gi|284990731|ref|YP_003409285.1| L-carnitine dehydratase/bile acid-inducible protein F
[Geodermatophilus obscurus DSM 43160]
gi|284063976|gb|ADB74914.1| L-carnitine dehydratase/bile acid-inducible protein F
[Geodermatophilus obscurus DSM 43160]
Length = 384
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/383 (43%), Positives = 222/383 (57%), Gaps = 24/383 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFVQDTVGYGKKSLCINL 58
L GI V+E AGL P P+ ++L E GA V+R+D+ G P +D + + S+ ++L
Sbjct: 8 LAGIRVVELAGLGPVPYACVLLAELGADVVRVDRPGGGTQLVPPERDALNRSRPSVAVDL 67
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G V+ L +DV++E R GV E+L +GPD NPRL+YAR++G+GQDGP +
Sbjct: 68 KSPAGRDVVLRLVESADVLVEGLRPGVTERLGVGPDECWARNPRLVYARMTGWGQDGPLA 127
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYLGL+G L +G P PP N ADFGGG L +G++ AL ER SGRG
Sbjct: 128 DRAGHDINYLGLTGALHAIG-TAEAPVPPLNAVADFGGGALFLVVGVLAALLERQTSGRG 186
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+G++ L + + W R NLLDGGA FY TY DGR +AVG++E
Sbjct: 187 QVVDAAMVDGASSLVTMVYGLLGAGRWQDRRAANLLDGGAPFYGTYACADGRHVAVGSIE 246
Query: 239 SQFYAQLLAGLGMTEEE----------LPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTD 288
QF+AQLLAGLG+ E QHE ++ F + + EW E F TD
Sbjct: 247 PQFHAQLLAGLGIDPGEHGGQFDVARWPEQHE------RIAAAFATRDRDEWAEAFAGTD 300
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
ACVTPVL L++A SHPH RG+F +R G P PAPR SRTPG + APG T
Sbjct: 301 ACVTPVLGLTEAPSHPHLAARGTFA-DRGGHPEPTPAPRFSRTPGAVRGEPR--APGQDT 357
Query: 349 REVLRHFGYSDANIEELIREDVI 371
R L +G+ + + L+ +
Sbjct: 358 RTALAGWGFGEDEVTGLLEAGAV 380
>gi|83858284|ref|ZP_00951806.1| hypothetical protein OA2633_02256 [Oceanicaulis sp. HTCC2633]
gi|83853107|gb|EAP90959.1| hypothetical protein OA2633_02256 [Oceanicaulis sp. HTCC2633]
Length = 372
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 221/369 (59%), Gaps = 10/369 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
++G+ VLEF GL PAPFC M+L++ GA V+RID+ H + + G++S NLK
Sbjct: 1 MRGVKVLEFVGLGPAPFCAMLLSDLGAEVVRIDRPHAGGGGPAEVLARGRRSAAFNLKSP 60
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ ++ + ++LE +R GVME+L LGP+ K+NP L+Y R++G+GQ GP + A
Sbjct: 61 GAVKACLSMMKSAHIVLEGYRPGVMERLGLGPEEALKANPALVYGRMTGWGQYGPLAHAA 120
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ L+G L +G +++ P PP N+ DFGGG + A+G++ AL +G GQV+
Sbjct: 121 GHDLNYIALTGALDAIGPKDK-PVPPVNVVGDFGGGSMYLAVGVLAALHHARTTGEGQVV 179
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D +V+G+A+L + + +W +PRGENLLDGGA FYD Y D F+++GALE +F
Sbjct: 180 DAAIVDGAAHLMGAVHQLDAIGMWSQPRGENLLDGGAPFYDAYRCADDAFVSIGALEGEF 239
Query: 242 YAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
+ L+ LG+++ Q + + R E F + QA W ++ D TDAC PVL
Sbjct: 240 FQLLIDKLGLSDHPAMQAQYDAKSWPAMRQTFEETFASQPQAHWIDLLDGTDACFAPVLD 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
A +PH RG F+ GV APAPR SRTPG I P PG HT VLR +G
Sbjct: 300 TKAAAENPHMKARGVFV-EVEGVRQAAPAPRFSRTPGA--IQSVAPVPGEHTETVLRDWG 356
Query: 357 YSDANIEEL 365
+SDA I L
Sbjct: 357 FSDAEIANL 365
>gi|379745909|ref|YP_005336730.1| mcr [Mycobacterium intracellulare ATCC 13950]
gi|378798273|gb|AFC42409.1| mcr [Mycobacterium intracellulare ATCC 13950]
Length = 383
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 216/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
LKG+ V+E AG+ P P MIL + GA V+RID+ + P +D + ++ + +LK
Sbjct: 28 LKGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSGPGGVAKDAMMRNRRVVTADLKT 87
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L +DV++E +R GV E+L LGP+ K N RL+YAR++G+GQ GP S
Sbjct: 88 DEGRGLVLKLIANADVLIEGYRPGVTERLGLGPEDCAKVNDRLVYARMTGWGQTGPRSQQ 147
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 148 AGHDINYISLNGILHSIGRVNERPVPPLNLVGDFGGGSMFLLLGILSALWERQTSGKGQV 207
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 208 VDAAMVDGSSVLVQMMWQMRSSGMWTDARGTNLLDGGAPYYDTYECADGRYVAVGAIEPQ 267
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTPVL+
Sbjct: 268 FYAAMLAGLGLDGADLPGQNDVGRWPELRAVLTEKFASQDRDHWAKVFADSDACVTPVLA 327
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 328 FGEVQTEPHITERDTFYEVDGG-LQPRPAPRFSRT 361
>gi|343927798|ref|ZP_08767266.1| alpha-methylacyl-CoA racemase [Gordonia alkanivorans NBRC 16433]
gi|343762439|dbj|GAA14192.1| alpha-methylacyl-CoA racemase [Gordonia alkanivorans NBRC 16433]
Length = 369
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 220/336 (65%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G P D + G++ + NLK
Sbjct: 15 LSSIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGTLPKPGVNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + +L ++DVI+E FR GVME+L GPD L + NP L+Y R++G+GQ+GP ++
Sbjct: 75 DETDRATILDLVAKADVIIEGFRPGVMERLGFGPDDLTEVNPGLVYGRMTGWGQEGPRAN 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G ++ P PP NLA DFGGG + +G++ AL ER SG+GQ
Sbjct: 135 LAGHDINYISLTGLLHAIGRKDDRPVPPLNLAGDFGGGSMFLVVGVLAALLERGISGKGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWSDTRGTNMLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELP-QHEVET-GRAK--LTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GLG+ + +LP Q+++ G+ K TE FK +T+ EW ++FD TDAC +PVL
Sbjct: 255 QFYAELLKGLGLEDADLPAQNDIANWGKLKEIFTETFKSRTRDEWAKVFDGTDACTSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A + PH R + + + GV APR SRT
Sbjct: 315 TFAEAPTDPHMAARANLV-DIDGVTQAQVAPRFSRT 349
>gi|406029512|ref|YP_006728403.1| alpha-methylacyl-CoA racemase [Mycobacterium indicus pranii MTCC
9506]
gi|405128059|gb|AFS13314.1| Alpha-methylacyl-CoA racemase [Mycobacterium indicus pranii MTCC
9506]
Length = 356
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 217/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
+KG+ V+E AG+ P P MIL + GA V+RID+ + P +D + ++ + +LK
Sbjct: 1 MKGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSGPGGVAKDAMMRNRRVVTADLKS 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L ++DV++E +R GV E+L LGP+ K N RL+YAR++G+GQ GP S
Sbjct: 61 DEGRGLVLKLIAKADVLIEGYRPGVTERLGLGPEDCAKVNDRLVYARMTGWGQTGPRSQQ 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 121 AGHDINYISLNGILHSIGRVNERPVPPLNLVGDFGGGSMFLLLGILSALWERQTSGKGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 181 VDAAMVDGSSVLVQMMWQMRSSGMWTDARGTNLLDGGAPYYDTYECADGRYVAVGAIEPQ 240
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTPVL+
Sbjct: 241 FYAAMLAGLGLDGADLPGQNDVGRWPELRAVLTEKFASQDRDHWAKVFADSDACVTPVLA 300
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 301 FGEVQTEPHITERDTFYEVDGG-LQPRPAPRFSRT 334
>gi|441516771|ref|ZP_20998515.1| alpha-methylacyl-CoA racemase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441456237|dbj|GAC56476.1| alpha-methylacyl-CoA racemase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 370
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 213/337 (63%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+RI + G P D + G++ + NLK
Sbjct: 15 LSSIRVIEFAGIGPGPHAAMLLADLGADVVRIQRPGELPKEGAKADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ NL ++DV++E FR GVME+L GPD L NPRLIY R++G+GQDGP +
Sbjct: 75 NPAERETILNLIAKADVVIEGFRPGVMERLGFGPDDLEAVNPRLIYGRMTGWGQDGPRAE 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHD+NY+ L+G+L +G + PTPP NL DFGGG + +GI+ AL ERS SG+G+
Sbjct: 135 LAGHDMNYISLTGMLHAIGRADEKPTPPLNLVGDFGGGSMFLVVGILAALVERSVSGKGE 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG NLLD GA FY+ YET DG++MAVG++E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWQDRRGVNLLDTGAPFYEVYETSDGKWMAVGSIEP 254
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYAQL+ GL + E LP H+++ R E FK KT+ EW IF+ TDACV+PV
Sbjct: 255 QFYAQLIEGLALDAESLP-HQLDFSRWAELKETFAETFKTKTRDEWAAIFEGTDACVSPV 313
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
L ++A S PH RG+ I GV+ APR +R+
Sbjct: 314 LDFTEAPSDPHLAARGTLI-EIDGVMQAQVAPRFTRS 349
>gi|357021582|ref|ZP_09083813.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium thermoresistibile ATCC 19527]
gi|356479330|gb|EHI12467.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium thermoresistibile ATCC 19527]
Length = 365
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 224/363 (61%), Gaps = 13/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF------VQDTVGYGKKSLCI 56
L+G+ V+E AG+ P P MIL + GA V+RI++ P +D + ++S+
Sbjct: 5 LQGLRVVELAGIGPGPHAAMILGDLGADVVRIERPRNTPGPGIPRGAKDHLLRNRRSVAA 64
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G +++ L ++DV++E +R GV E+L LGP+ K NPRLIY R++G+GQDGP
Sbjct: 65 DLKTEEGKELVRKLIAKADVLIEGYRPGVTERLGLGPEDCAKINPRLIYGRMTGWGQDGP 124
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+ L+G L +G + P PP NLA DFGGG + +GI+ ALFER SG
Sbjct: 125 RAQQAGHDINYISLNGTLHAVGRKGERPVPPLNLAGDFGGGSMFLLVGILAALFERQTSG 184
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D M++GSA L + + +W RG N+LD GA +YDTYET DG+++AVGA
Sbjct: 185 KGQVVDAAMIDGSAVLMQMMWAFRAMGMWSDERGVNMLDTGAPYYDTYETADGKYVAVGA 244
Query: 237 LESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E QFYA++L GLG+ E+LP + RA+ E FK K + W ++F TDACVT
Sbjct: 245 IEPQFYAEMLKGLGLEGEDLPDQNDMSRWDELRARFAEVFKSKDRDHWAQVFAGTDACVT 304
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLS ++ S H V R +F + PAPAPR SR+ ++ + PG T VL
Sbjct: 305 PVLSFAEVESEAHVVERNTFY-REGDHLLPAPAPRFSRSVPSAPTPPRD--PGADTDAVL 361
Query: 353 RHF 355
+ +
Sbjct: 362 QDW 364
>gi|254469620|ref|ZP_05083025.1| alpha-methylacyl-CoA racemase [Pseudovibrio sp. JE062]
gi|211961455|gb|EEA96650.1| alpha-methylacyl-CoA racemase [Pseudovibrio sp. JE062]
Length = 379
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 223/372 (59%), Gaps = 17/372 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E AGL PAP G +L + GA VI ID+ + +D GKKS+ +N+K
Sbjct: 9 LSGLQVVEMAGLGPAPMAGQLLADLGADVIVIDRRTGERIDKDVNRRGKKSIALNMKSEG 68
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++V +L ++D+++E FR GVME+L LGPD NP LIY R++G+GQDGP + AG
Sbjct: 69 AVNVFFSLIEKADILIEGFRPGVMERLGLGPDECLARNPGLIYGRMTGWGQDGPLAHAAG 128
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HD+NYL ++G+L +G R P PP N+AAD+GGG + LG++ ALFERS+SG+GQVID
Sbjct: 129 HDLNYLAMTGMLHAIGEEGRPPVPPLNMAADYGGGSMFLLLGVLSALFERSRSGKGQVID 188
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + + LW R NLLDGGA FY YET DGR+++VG+LE QF+
Sbjct: 189 AAMVDGVPAMMGLIYSLMGRGLWQDKRQTNLLDGGAPFYRCYETSDGRYLSVGSLEPQFF 248
Query: 243 AQLLAGLGMTEE---------ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
A LL GL + E E P+ E + G A K T W +F TDACV P
Sbjct: 249 ALLLKGLDLPPELSKIQMNMKEWPKLEEQIGAA-----IKANTLDHWTGVFAGTDACVAP 303
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLS+ +A + N R + I GV APAPR SRT + E G HT +VL+
Sbjct: 304 VLSIEEANAASLNTERANRI-RLGGVTQAAPAPRFSRT--VPQTPEPAGRTGDHTSQVLQ 360
Query: 354 HFGYSDANIEEL 365
G+S+++I+E+
Sbjct: 361 ELGFSESDIDEM 372
>gi|378719134|ref|YP_005284023.1| alpha-methylacyl-CoA racemase Mcr [Gordonia polyisoprenivorans VH2]
gi|375753837|gb|AFA74657.1| alpha-methylacyl-CoA racemase Mcr [Gordonia polyisoprenivorans VH2]
Length = 370
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 214/336 (63%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L + V+EFAG+ P P M+L + GA VIR+ + G P D + G++ + NLK
Sbjct: 15 LNRLRVIEFAGIGPGPHAAMMLADLGADVIRVQRPGTLPAEGRNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L ++DVILE FR GVME+L GPD L + NP L+Y R++G+GQDGP +
Sbjct: 75 DPADRDTILGLIAKADVILEGFRPGVMERLGFGPDDLAEVNPGLVYGRMTGWGQDGPRAE 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G R P PP NLA DFGGG + +G++ ALFER SGRGQ
Sbjct: 135 LAGHDINYISLTGLLHAIGRRGERPVPPLNLAGDFGGGSMFLVMGVLSALFERQFSGRGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWSDERGVNMLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GLG+ + +LP Q++V + TE F +T+ EW ++FD TDAC +PVL
Sbjct: 255 QFYAELLKGLGLADADLPDQNDVAKWPELKKIFTETFASRTRDEWAKVFDGTDACTSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
S ++A + PH R + + GV+ APR SRT
Sbjct: 315 SFAEAPTDPHMSARANLL-EIDGVMQAQVAPRFSRT 349
>gi|359764643|ref|ZP_09268487.1| alpha-methylacyl-CoA racemase [Gordonia polyisoprenivorans NBRC
16320]
gi|359318011|dbj|GAB21320.1| alpha-methylacyl-CoA racemase [Gordonia polyisoprenivorans NBRC
16320]
Length = 370
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 214/336 (63%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L + V+EFAG+ P P M+L + GA VIR+ + G P D + G++ + NLK
Sbjct: 15 LNRLRVIEFAGIGPGPHAAMMLADLGADVIRVQRPGTLPAEGRNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L ++DVILE FR GVME+L GPD L + NP L+Y R++G+GQDGP +
Sbjct: 75 DPADRDTILGLIAKADVILEGFRPGVMERLGFGPDDLAEVNPGLVYGRMTGWGQDGPRAE 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G R P PP NLA DFGGG + +G++ ALFER SGRGQ
Sbjct: 135 LAGHDINYISLTGLLHAIGRRGERPVPPLNLAGDFGGGSMFLVMGVLSALFERQFSGRGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWSDERGVNMLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GLG+ + +LP Q++V + TE F +T+ EW ++FD TDAC +PVL
Sbjct: 255 QFYAELLKGLGLADADLPDQNDVAKWPELKKIFTETFASRTRDEWAKVFDGTDACTSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
S ++A + PH R + + GV+ APR SRT
Sbjct: 315 SFAEAPTDPHMSARANLL-EIDGVMQAQVAPRFSRT 349
>gi|54312031|dbj|BAD66657.1| alpha-Methylacyl-CoA racemase [Mycobacterium sp. P101]
Length = 360
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 218/337 (64%), Gaps = 7/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKA 61
L G+ V+E AG+ P P MIL + GA V+R+D+ A +D + ++S+ +LK A
Sbjct: 5 LHGLRVVELAGIGPGPHAAMILGDLGADVVRVDRPTASNSPAKDAMLRNRRSVTADLKSA 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G + +L ++DV++E FR GV E+L LGP+ K N +L+YAR++G+GQDGP + A
Sbjct: 65 EGKQFVLDLVAKADVLIEGFRPGVTERLGLGPEDCAKVNEKLVYARMTGWGQDGPRALQA 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G+L +G + P PP NLA DFGGG + LGI+ ALFER SG+GQV+
Sbjct: 125 GHDINYISLNGVLHAIGRKGEKPVPPLNLAGDFGGGSMFLLLGILSALFERQTSGKGQVV 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M++GS+ L + + LW RG N+LD GA +YDTYET DG+ A+GA+E QF
Sbjct: 185 DAAMIDGSSVLIQMMWSFRSQGLWSDERGTNMLDTGAPYYDTYETADGKHFAIGAIEPQF 244
Query: 242 YAQLLAGLGMTEEELP-QHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA+LLA LG+ + ELP Q+++ E R TE FK KT+ EW +IF +DAC TPVL+
Sbjct: 245 YAELLAKLGLDQAELPGQNDMARWEELRTTFTEVFKTKTRDEWAQIFAGSDACATPVLAF 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PG 333
+ + PH R +F +G + P PAPR SR+ PG
Sbjct: 305 GEVLTEPHVAERDTFYETGSG-LQPMPAPRFSRSRPG 340
>gi|358389741|gb|EHK27333.1| hypothetical protein TRIVIDRAFT_85903 [Trichoderma virens Gv29-8]
Length = 393
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 208/312 (66%), Gaps = 11/312 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQPFVQDTVGYGKKSLCIN 57
LKGI VLEFAGLAP PF G+IL + GA+V+R+D+ GA P D + K S+ ++
Sbjct: 10 LKGIKVLEFAGLAPGPFAGLILADAGASVLRVDRPPSSSEGAVP-TPDMLARHKSSIIVD 68
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G++++K L DV+++PFR GV+EKL LGPD L NPRLIY R++G+ +DG Y
Sbjct: 69 LKNPRGVALIKRLVKHIDVLIDPFRPGVLEKLGLGPDELLAINPRLIYGRMTGFRRDGKY 128
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ MAGHDINYL SG+L+LLG P PP N+ ADF GGG M A G+++A+ R SG+
Sbjct: 129 ADMAGHDINYLAASGVLALLGRPGEKPLPPWNILADFAGGGAMLAQGVLLAIISRLSSGK 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV++ NMV+GS+YL S+ + T L D PRG N+LDGG +YDTYET DG +M+VGAL
Sbjct: 189 GQVVEANMVDGSSYLASFPRMSLKTPLGDNPRGNNILDGGCPWYDTYETSDGEYMSVGAL 248
Query: 238 ESQFYAQLLAGLGMTEE--ELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QF+ LL GL + + E +H+ + RA E FK KT+ EW +FD TDAC
Sbjct: 249 EPQFFQALLKGLRLQGQGWESKRHDRSSWPRLRALFAETFKSKTRDEWEAVFDGTDACCV 308
Query: 293 PVLSLSQATSHP 304
PVL S+ S P
Sbjct: 309 PVLHYSELESQP 320
>gi|374331507|ref|YP_005081691.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudovibrio
sp. FO-BEG1]
gi|359344295|gb|AEV37669.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudovibrio
sp. FO-BEG1]
Length = 379
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 223/372 (59%), Gaps = 17/372 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E AGL PAP G +L + GA VI ID+ + +D GKKS+ +N+K
Sbjct: 9 LSGLQVVEMAGLGPAPMAGQLLADLGADVIVIDRRTGERIDKDVNRRGKKSIALNMKSEG 68
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++V +L ++D+++E FR GVME+L LGPD NP LIY R++G+GQDGP + +AG
Sbjct: 69 AVNVFFSLIEKADILIEGFRPGVMERLGLGPDECLARNPGLIYGRMTGWGQDGPLAHVAG 128
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HD+NYL ++G+L +G R P PP N+AAD+GGG + LG++ ALFERS+SG+GQVID
Sbjct: 129 HDLNYLAMTGMLHAIGEEGRPPVPPLNMAADYGGGSMFLLLGVLSALFERSRSGKGQVID 188
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + + LW R NLLDGGA FY YET DGR+++VG+LE QF+
Sbjct: 189 AAMVDGVPAMMGLIYSLMGRGLWQDKRQTNLLDGGAPFYRCYETSDGRYLSVGSLEPQFF 248
Query: 243 AQLLAGLGMTEE---------ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
A LL GL + E E P+ E + G A K T W +F TDACV P
Sbjct: 249 ALLLKGLDLPPELSKIQMNMKEWPKLEEQIGTA-----IKANTLDHWTGVFAGTDACVAP 303
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLS+ +A + N R + I GV APAPR SRT + E G HT +VL+
Sbjct: 304 VLSIEEANAAALNTERANRI-RLGGVTQAAPAPRFSRT--VPQTPEPAGRTGDHTSQVLQ 360
Query: 354 HFGYSDANIEEL 365
G+S+++I E+
Sbjct: 361 ELGFSESDINEM 372
>gi|294633013|ref|ZP_06711572.1| alpha-methylacyl-CoA racemase [Streptomyces sp. e14]
gi|292830794|gb|EFF89144.1| alpha-methylacyl-CoA racemase [Streptomyces sp. e14]
Length = 385
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 161/374 (43%), Positives = 223/374 (59%), Gaps = 15/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQ--DTVGYGKKSLCI 56
L G+ ++E G+ P PFC M+L++ GA ++RID+ G P + + G++S +
Sbjct: 9 LAGVRIVELGGVGPTPFCCMLLSDLGADIVRIDRPPGYDGGAPVEPRFNLLNRGRRSAAL 68
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + + L +D ++E FR GV EKL LGPD +NPRL+Y R++G+GQDGP
Sbjct: 69 DLKNGAAVEAVLRLVRDADAVIEGFRPGVAEKLGLGPDECRAANPRLVYGRMTGWGQDGP 128
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ GHD+NY+ L+G+L +G P P NLA DFGGG L ALG+V AL E SG
Sbjct: 129 LAQAPGHDVNYVSLTGVLHSVGRAGGPPVIPLNLAGDFGGGSLYLALGVVSALLESRTSG 188
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQVID MV+GSA L + W+ RG N LD GA +YD YETKDGR+++VG+
Sbjct: 189 RGQVIDAAMVDGSASLMTLFYGLHAAGYWNDERGTNRLDSGAPWYDVYETKDGRWLSVGS 248
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E++F+ L LG+ EE++P T R L E + +T+ EWC + + + CV
Sbjct: 249 NEARFWRNTLRLLGLREEDMPDQHDRTRWPEMRTTLAEVLRTRTRDEWCALAEGQEVCVA 308
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREV 351
PVLSL++A HPH RG+F GV+ PAPAPR SRTPG + PA PG HT EV
Sbjct: 309 PVLSLTEAPGHPHLRERGTFT-EVEGVIQPAPAPRFSRTPGA---IQGPPAEPGQHTDEV 364
Query: 352 LRHFGYSDANIEEL 365
L +G++ + L
Sbjct: 365 LGDWGFTAEELSAL 378
>gi|367025701|ref|XP_003662135.1| hypothetical protein MYCTH_2302339 [Myceliophthora thermophila ATCC
42464]
gi|347009403|gb|AEO56890.1| hypothetical protein MYCTH_2302339 [Myceliophthora thermophila ATCC
42464]
Length = 402
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 211/303 (69%), Gaps = 11/303 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-----PFVQDTVGYGKKSLCIN 57
L+GI V+EFAGLAP PF G++L + GA+V+RID+ + P D + K+S+ ++
Sbjct: 7 LQGIRVIEFAGLAPGPFAGLMLADAGASVLRIDRPSSSSGAPAPPADDLLTRHKRSVAVD 66
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G ++++ LA ++DV+++PFR GV+E L LGP L + NPRL+YARL+G+ +DG +
Sbjct: 67 LKNRRGAALVRALATRADVLIDPFRPGVLEALSLGPAELLRRNPRLVYARLTGFRRDGRF 126
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
++MAGHDINYL +SG+L+LLG R PTPP NL DF GG M ++MAL R ++GR
Sbjct: 127 AAMAGHDINYLAVSGVLALLGRRGAPPTPPANLLGDFAAGGAMLVHAVLMALLARERTGR 186
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV++ NMV+G++YL S+ + T +WD+PRGENLLD G FYD YET DGR++AVGAL
Sbjct: 187 GQVVEANMVDGASYLASFARFARRTPVWDRPRGENLLDSGCPFYDCYETADGRWVAVGAL 246
Query: 238 ESQFYAQLLAGLGMTE---EELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACV 291
E +F+A+L+AGLG+ E +H+ R + E F+ +T+AEW +F TDAC
Sbjct: 247 EDRFFARLVAGLGLQGQGWERGRRHDRAQWPELRRLMAEAFRSRTRAEWERVFVGTDACC 306
Query: 292 TPV 294
TPV
Sbjct: 307 TPV 309
>gi|387874572|ref|YP_006304876.1| mcr [Mycobacterium sp. MOTT36Y]
gi|443304504|ref|ZP_21034292.1| mcr [Mycobacterium sp. H4Y]
gi|386788030|gb|AFJ34149.1| mcr [Mycobacterium sp. MOTT36Y]
gi|442766068|gb|ELR84062.1| mcr [Mycobacterium sp. H4Y]
Length = 360
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 216/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
LKG+ V+E AG+ P P MIL + GA V+RID+ + P +D + ++ + +LK
Sbjct: 5 LKGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSGPGGVAKDAMMRNRRVVTADLKS 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G + L ++DV++E +R GV E+L LGP+ K N RL+YAR++G+GQ GP S
Sbjct: 65 DEGRGHVLKLIAKADVLIEGYRPGVTERLGLGPEDCAKVNDRLVYARMTGWGQTGPRSQQ 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 125 AGHDINYISLNGILHSIGRVNERPVPPLNLVGDFGGGSMFLLLGILSALWERQSSGKGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 185 VDAAMVDGSSVLVQMMWQMRSSGMWTDARGTNLLDGGAPYYDTYECADGRYVAVGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTPVL+
Sbjct: 245 FYAAMLAGLGLDGADLPGQNDVGRWPELRAVLTEKFASQDRDHWAKVFADSDACVTPVLA 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 305 FGEVQTEPHITERDTFYEVDGG-LQPRPAPRFSRT 338
>gi|334342754|ref|YP_004555358.1| alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
gi|334103429|gb|AEG50852.1| Alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
Length = 397
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/376 (41%), Positives = 233/376 (61%), Gaps = 11/376 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GIT++E GL P PF GM+L + GA VI+I++ G++ D + + L ++LK
Sbjct: 15 LSGITIVELEGLGPGPFAGMMLADHGAHVIQIERLGSRRPSPDILSRSRMRLSVDLKSEA 74
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G ++++L +D +E FR G +E+L LGPDVL NPRL+Y R++G+GQ GP + AG
Sbjct: 75 GHGLVRDLCRNADGFIEGFRPGTVERLGLGPDVLMADNPRLVYGRMTGWGQAGPLAQAAG 134
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ LSG L+++G +R P P NL DFGGGG++ A G++ A+ G+GQ++D
Sbjct: 135 HDINYIALSGALNMVGDADRPPMVPVNLVGDFGGGGMLLAFGMLAAILNARSGGQGQIVD 194
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
C MV+GSA L + + ++ W RG NL DG A FY YET DG+ +A+GA E QF+
Sbjct: 195 CAMVDGSALLTTLMWSMKEQGRWRDERGANLFDGAAPFYRAYETADGKAIALGAYEPQFF 254
Query: 243 AQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A LL LG+T++ L +++ R L F+ +++ WC++ +++DAC T VLS+
Sbjct: 255 ALLLDRLGLTDDPLFSDQMDREKWPAQRTALAALFQTRSREAWCQLLESSDACATGVLSM 314
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP-GTSKITEHNPAPGVHTREVLRHFG 356
++A SHPHN RG+F+ V PAPAPR S TP GT ++ + A G+ ++ G
Sbjct: 315 TEALSHPHNRARGTFV-TVDDVPQPAPAPRYSGTPLGTPQL--QSDADGLSV--LMAAIG 369
Query: 357 YSDANIEELIREDVIE 372
Y A + EL R V+E
Sbjct: 370 YPPARLGELARAGVVE 385
>gi|319763641|ref|YP_004127578.1| l-carnitine dehydratase/bile acid-inducible protein f
[Alicycliphilus denitrificans BC]
gi|330824094|ref|YP_004387397.1| alpha-methylacyl-CoA racemase [Alicycliphilus denitrificans K601]
gi|317118202|gb|ADV00691.1| L-carnitine dehydratase/bile acid-inducible protein F
[Alicycliphilus denitrificans BC]
gi|329309466|gb|AEB83881.1| Alpha-methylacyl-CoA racemase [Alicycliphilus denitrificans K601]
Length = 385
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/366 (42%), Positives = 221/366 (60%), Gaps = 13/366 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQ--DTVGYGKKSLCI 56
LKG+ ++E G+ PAPFC M+L + GA V+RID+ G P D + ++S+ +
Sbjct: 9 LKGVRIVEIGGIGPAPFCCMLLADLGAEVVRIDRPAGHDGGAPIDARFDLLNRSRRSVQM 68
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LKK + ++ + + Q+DV++E FR GVME+L LGPD K+NPRL+Y R++G+GQDGP
Sbjct: 69 DLKKPEAVAAVLRMVAQADVLIEGFRPGVMERLGLGPDACLKANPRLVYGRMTGWGQDGP 128
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ GHD+NY+ L+G L +G P P NL DFGGG L ALG++ AL E SG
Sbjct: 129 LAQAPGHDVNYISLTGALHAMGRAGEAPAIPLNLVGDFGGGSLYLALGVLSALLEARTSG 188
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G+ L + + W RG N LD GA +Y+ YET+DGR +++ A
Sbjct: 189 QGQVVDAAMVDGATSLMTLIYGLLAAGYWKDERGANRLDSGAPWYNVYETRDGRHVSIAA 248
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E++FY + L LG+ E ELP + G + + E FK +TQ EW + T +C+
Sbjct: 249 NETRFYREALGVLGLAERELPGQHDQAGWPLMKQRFAEVFKTRTQGEWVALAAGTQSCIV 308
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLSL++A H H RGSF+ GV+ PAPAPR SRTPG I P PG VL
Sbjct: 309 PVLSLAEAPGHDHIRQRGSFV-EVDGVLQPAPAPRFSRTPGA--IQNPPPHPGQDGDAVL 365
Query: 353 RHFGYS 358
+G+S
Sbjct: 366 GDWGFS 371
>gi|294146827|ref|YP_003559493.1| putative L-carnitine dehydratase [Sphingobium japonicum UT26S]
gi|292677244|dbj|BAI98761.1| putative L-carnitine dehydratase [Sphingobium japonicum UT26S]
Length = 363
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 210/334 (62%), Gaps = 6/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ ++E AG+ P PFCGM+L + GA VIR+++ GA D + ++S+ ++LK A
Sbjct: 5 LAGVRIIEMAGIGPGPFCGMMLADHGAEVIRVERPGAVVDRHDALARSRRSIVLDLKDAD 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ ++ L +D ++E FR GVME+L LGPDVL NP+L+Y R++G+GQ GP + AG
Sbjct: 65 AIAQLRGLVATADGLIEGFRPGVMERLGLGPDVLLADNPKLVYGRMTGWGQTGPLAQAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ LSG L G PTPP NL DFGGG +M A + ALF S+ G GQVID
Sbjct: 125 HDINYVALSGALHGCGRAGERPTPPMNLLGDFGGGAMMLAFAMASALFHVSRGGSGQVID 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
C + +GSA L + W RG NLLD GAHFYD+YE DG+++++GA+E +FY
Sbjct: 185 CAITDGSALLNAMTMSFVTAGEWRDERGVNLLDTGAHFYDSYECADGKYISIGAIEPKFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A L LG+ ++ +++ + +L F+ + + EWC + + TDAC PVLS+
Sbjct: 245 ALLREKLGLEDDAAFDRQLDATAWPLLKTRLEALFRTRARDEWCALLEGTDACFAPVLSV 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
++A HPHN R +FI + G++ PAPAPR S T
Sbjct: 305 AEAPGHPHNAARDTFI-DVDGLMQPAPAPRFSVT 337
>gi|453382465|dbj|GAC83112.1| alpha-methylacyl-CoA racemase [Gordonia paraffinivorans NBRC
108238]
Length = 370
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 214/336 (63%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G P D + G+K + NLK
Sbjct: 15 LSSIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGGLPQPGRKADALLRGRKVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + +L ++DV++E FR GVME+L GP+ L K NP L+Y R++G+GQDGP ++
Sbjct: 75 DETDRATILDLVAKADVVIEGFRPGVMERLGFGPEDLEKVNPGLVYGRMTGWGQDGPRAN 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G + P PP NL DFGGG + +GI+ AL ER SG+GQ
Sbjct: 135 LAGHDINYISLTGMLHAIGRADDRPVPPLNLVGDFGGGSMFLVVGILAALLERGVSGKGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWQDRRGVNMLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+ + GLG+++ ++P+ KL TE FK +T+ EW EIFD TDACV+PVL
Sbjct: 255 QFYAEFIKGLGLSDADIPEQNDFANWGKLKEIFTETFKTRTRDEWAEIFDGTDACVSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A PH R + + + GV APR SRT
Sbjct: 315 TFAEAPQDPHMAARENLV-DIDGVTQAQVAPRFSRT 349
>gi|126513533|gb|ABO15871.1| L-carnitine dehydratase [Streptomyces vitaminophilus]
Length = 387
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/374 (44%), Positives = 228/374 (60%), Gaps = 12/374 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-PFVQDTVGYGKKSLCINLKKA 61
L G+ VLE G+ P PFCGM+L + GA VIR+++ G + + G++S+ ++LK
Sbjct: 15 LAGVRVLELGGIGPGPFCGMVLADMGADVIRVERPGDRGALAMPVLLRGRRSVALDLKDP 74
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
++++A + D ++E FR GV E+L LGP+ LC++NPRL+YAR++G+GQDGP++
Sbjct: 75 VAARAVRSIAERCDALIEGFRPGVTERLGLGPEELCQANPRLVYARMTGWGQDGPHAQAP 134
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL LSG L G + +P PP NL ADFGGGG++ ALG+V AL + GRGQV+
Sbjct: 135 GHDINYLALSGALHTFGPADGDPVPPLNLVADFGGGGMLLALGVVSALLRAQRDGRGQVV 194
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D +MV+G+A L + LW RG NLLDG FY Y +D R +AVG LE QF
Sbjct: 195 DASMVDGTALLLAMTYGFLANGLWTDQRGVNLLDGSGPFYRVYRCRDQRHVAVGCLEEQF 254
Query: 242 YAQLLAGLGMTEEELPQHEVETGRA-------KLTEKFKEKTQAEWCEIFDNTDACVTPV 294
A LL LG+T++ P R +L + F +T+ W +F+ T ACVTPV
Sbjct: 255 RADLLRVLGLTDD--PDFATPDDRKNWPVMNQRLEQIFTSRTRDNWAALFEGTQACVTPV 312
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL++A +HPHN+ RG+++ G+V P+PAPR TP S P PG HT EVL
Sbjct: 313 LSLNEAAAHPHNLARGTYLAGPTGIVQPSPAPRFGGTP--SDAPRAAPTPGEHTAEVLAE 370
Query: 355 FGYSDANIEELIRE 368
G + A I L E
Sbjct: 371 AGLTSAEIAALTPE 384
>gi|379760633|ref|YP_005347030.1| mcr [Mycobacterium intracellulare MOTT-64]
gi|378808575|gb|AFC52709.1| mcr [Mycobacterium intracellulare MOTT-64]
Length = 356
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 216/335 (64%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
+KG+ V+E AG+ P P MIL + GA V+RID+ + P +D + ++ + +LK
Sbjct: 1 MKGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSGPGGVAKDAMMRNRRVVTADLKS 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G ++ L ++DV++E +R GV E+L LGP+ K N RL+YAR++G+GQ GP S
Sbjct: 61 DEGRGLVLKLIAKADVLIEGYRPGVTERLGLGPEDCAKVNDRLVYARMTGWGQTGPRSQQ 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + LGI+ AL+ER SG+GQV
Sbjct: 121 AGHDINYISLNGILHSIGRVNERPVPPLNLVGDFGGGSMFLLLGILSALWERQTSGKGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + + + +W RG NLLDGGA +YDTYE DGR +AVGA+E Q
Sbjct: 181 VDAAMVDGSSVLVQMMWQMRSSGMWTDARGTNLLDGGAPYYDTYECADGRCVAVGAIEPQ 240
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ +LP Q++V RA LTEKF + + W ++F ++DACVTPVL+
Sbjct: 241 FYAAMLAGLGLDGADLPGQNDVGRWPELRAVLTEKFASQDRDHWAKVFADSDACVTPVLA 300
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F G + P PAPR SRT
Sbjct: 301 FGEVQTEPHITERDTFYEVDGG-LQPRPAPRFSRT 334
>gi|413961327|ref|ZP_11400555.1| alpha-methylacyl-CoA racemase [Burkholderia sp. SJ98]
gi|413930199|gb|EKS69486.1| alpha-methylacyl-CoA racemase [Burkholderia sp. SJ98]
Length = 386
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 234/375 (62%), Gaps = 15/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFV----QDTVGYGKKSL 54
L GI VLEF + PAPF M+L + GA V+RID+ A P V ++ G G++S+
Sbjct: 4 LSGIKVLEFEAIGPAPFGCMLLADMGADVLRIDRAVAPGDLGPKVSGKHKNLTGRGRRSV 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LKK + L +++DV++E FR G ME+L LGPD N +L+Y R++G+GQ
Sbjct: 64 TLDLKKRESADAALELMSKADVVIEGFRPGTMERLGLGPDAALARNSKLVYGRMTGWGQT 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHD+NY+ LSG+LS +G P PP NL D+GGGG++ ALG+V AL +
Sbjct: 124 GPLAQSAGHDLNYVALSGVLSGIGRAGEAPVPPLNLVGDYGGGGMLLALGVVAALLNVQR 183
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
G GQV+D M+EG+A LG+ + + W + R NLLDGG +YD+Y T+DG +M+V
Sbjct: 184 GGAGQVVDAAMIEGAAQLGTTVWGLIASGNWRETRESNLLDGGTPWYDSYRTRDGYYMSV 243
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
GA+E++FYA+LL LG+ + LP G +A+ T F E+T+ EWC +FD +DAC
Sbjct: 244 GAVEARFYAELLQKLGLADAGLPAQHDRAGWPVLKARFTAAFAERTRDEWCRVFDGSDAC 303
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
V PVL S+A +H H+ RGSF+ GVV PAPAPR S TP S I+ P G R+
Sbjct: 304 VAPVLGFSEAPAHAHHRARGSFV-EFDGVVQPAPAPRFSATP--SAISRPAPQRGEGGRD 360
Query: 351 VLRHFGYSDANIEEL 365
LR +G +DA + L
Sbjct: 361 ALRDWGLNDAELTRL 375
>gi|348169021|ref|ZP_08875915.1| alpha-methylacyl-CoA racemase [Saccharopolyspora spinosa NRRL
18395]
Length = 377
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 222/359 (61%), Gaps = 12/359 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E AG+ PAPFC M+L + GA V+R+D+ A D + GK+S ++LK +
Sbjct: 8 LAGIKVVELAGIGPAPFCAMLLADLGADVVRVDRPTAVGGKTDLLNRGKRSAQVDLKHER 67
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + LA Q+DV+LE R GV E+L +GP+ NP+L+Y R++G+GQ GP +S AG
Sbjct: 68 GAEAVLALAEQADVLLEGLRPGVTERLGVGPEQCWAVNPKLVYGRMTGWGQQGPLASTAG 127
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDI+Y+ L+G+L +G + P P NL DFGGG + A+G++ AL E SGRGQV+D
Sbjct: 128 HDIDYISLTGMLHAIGRKGGPPQVPANLLGDFGGGAMYLAVGVLAALLEARTSGRGQVVD 187
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G+A+LG+ L W RG NLLD GA +YD YET DG ++VGALE QFY
Sbjct: 188 AAIVDGAAHLGTMLFGLLAAGGWRTERGTNLLDTGAPYYDVYETSDGEHVSVGALEPQFY 247
Query: 243 AQLLAGLGMTEE----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A+LL LG+ E + P + E R + F+++T+ EW E+F ++DACV PVLS++
Sbjct: 248 AELLDRLGLAGEVPDRDDPANWPEL-RGRFAATFRQRTRQEWAEVFADSDACVAPVLSMT 306
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG--TSKITEHNPAPGVHTREVLRHF 355
+A H H R + + R G + PAPAPR SRTP + E PG T VLR +
Sbjct: 307 EAEVHSHMAARETLV-RRDGALQPAPAPRFSRTPNPPPGPVAE----PGADTDAVLRDW 360
>gi|119498807|ref|XP_001266161.1| isopenicillin N-CoA epimerase, putative [Neosartorya fischeri NRRL
181]
gi|119414325|gb|EAW24264.1| isopenicillin N-CoA epimerase, putative [Neosartorya fischeri NRRL
181]
Length = 382
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 217/329 (65%), Gaps = 8/329 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
+ L G+ V+E AGLAP PF G++L ++GA+V+R+D+ + D + K S+ ++L+
Sbjct: 6 LPLAGVRVVELAGLAPGPFAGLLLADYGASVLRVDRPNS--ISTDQLTRRKTSITLDLRD 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSS 119
++ ++ +++DV+++P+R GV+E+L L P DVL K NPRLI AR++G+ +DG Y
Sbjct: 64 KTSHRLLLSILSKADVLIDPYRPGVLERLGLSPSDVLLKHNPRLIVARMTGFRRDGKYKD 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINY+ +SG+LS+LG + P P N+ DF GGG MC LGI++AL R+ +GRGQ
Sbjct: 124 MAGHDINYIAVSGVLSMLGRKGEPPFAPGNILGDFAGGGAMCFLGILLALLARAHTGRGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALE 238
V++ NMV+GSAYL + + T LW+ PRGEN+LDGG+ FYDTYE KD G++ AVGALE
Sbjct: 184 VVEANMVDGSAYLATMPRLNRQTPLWNLPRGENMLDGGSPFYDTYECKDRGKYFAVGALE 243
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA L+ GLG ELP E RA ++FKEKT+AEW IFD TDAC TPV
Sbjct: 244 PQFYAALVKGLGFETGELPAREDRANWPALRAAFEQRFKEKTRAEWEAIFDGTDACATPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPA 323
L ++ + + + G+ PA
Sbjct: 304 LEQAELEQSGYEQRPAVHLVDTPGLPIPA 332
>gi|302526303|ref|ZP_07278645.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
sp. AA4]
gi|302435198|gb|EFL07014.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
sp. AA4]
Length = 364
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/365 (44%), Positives = 221/365 (60%), Gaps = 17/365 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRI-------DKHGAQPFVQDTVGYGKKSLC 55
L G+ V+E AG+ P P M+L + GA V+R+ D G +P D + G++S+
Sbjct: 5 LSGLKVVELAGIGPGPHACMVLADLGADVVRVERPSGSLDLTGGKP---DPLLRGRRSVA 61
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+LK +G ++ LA ++DV++E R GV E+L +GPD +NPRL+Y R++G+GQ+G
Sbjct: 62 ADLKTPEGRELVLRLAAKADVLIEGLRPGVTERLGVGPDDCFSANPRLVYGRMTGWGQEG 121
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINYLGL+G+L +G P PP NL DFGGG + G++ AL+E ++
Sbjct: 122 PLAQRAGHDINYLGLTGVLHAIGRAGERPVPPLNLVGDFGGGSMFLIAGVLAALWECGRT 181
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQV+D MV+G+ L + + W RG NLLDGGA FYDTY DGR++AVG
Sbjct: 182 GRGQVVDAAMVDGANVLSQMMWALRGLGSWSDERGTNLLDGGAPFYDTYVCADGRYVAVG 241
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
ALE QFYA LL GLG+ E+LP G RA T F +T+ EW IFD TDACV
Sbjct: 242 ALEPQFYAALLNGLGLAAEDLPPQLDRDGWPTLRATFTRAFLTRTRDEWASIFDGTDACV 301
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
TPVL+ +A +HPH R I G+V PAPAPR SR+ T + P PG T +V
Sbjct: 302 TPVLAPDEAAAHPHIAARSGLI-TLDGIVQPAPAPRFSRS--TPETPTPPPVPGADTEKV 358
Query: 352 LRHFG 356
L +G
Sbjct: 359 LADWG 363
>gi|453067440|ref|ZP_21970728.1| alpha-methylacyl-CoA racemase [Rhodococcus qingshengii BKS 20-40]
gi|452767210|gb|EME25452.1| alpha-methylacyl-CoA racemase [Rhodococcus qingshengii BKS 20-40]
Length = 366
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 216/336 (64%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L GI ++EFAGL P P +L + GA ++ + + G P D + G++ + NLK
Sbjct: 12 LAGIRIVEFAGLGPGPHAATLLADMGADIVIVQRAGQIPQDANATDQIKRGRRIVEANLK 71
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
++ + +L ++DV++E FR GVME++ LGPDV+ + NPRL+YAR++G+GQ+GP ++
Sbjct: 72 DPADVAKVLDLLGRADVLIEGFRPGVMERMGLGPDVVSERNPRLVYARMTGWGQEGPLAN 131
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L+ +G + P PP N+ DFGGG + GI+ AL ERS SG+GQ
Sbjct: 132 AAGHDINYISLTGVLNAIGRKGERPVPPLNMVGDFGGGSMFLIFGILSALVERSTSGKGQ 191
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G+ L + + +W RG NLLD GA FYDTYET DG++MAVG++E
Sbjct: 192 VVDAAMVDGTLALSHMMWAFRGRGVWSDERGVNLLDTGAPFYDTYETSDGKYMAVGSIEP 251
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAK-----LTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA LL GL + LP H+++T + TEKF KT+ EW +IF TDACV+PV
Sbjct: 252 QFYALLLEGLELDPATLP-HQMDTSKWDDMKKLFTEKFLSKTRDEWAKIFLGTDACVSPV 310
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
L+ ++A S+ H RGS I GV APAPR SR
Sbjct: 311 LTFAEAPSNEHIAARGSLI-ELDGVTQHAPAPRFSR 345
>gi|295689519|ref|YP_003593212.1| L-carnitine dehydratase/bile acid-inducible protein F [Caulobacter
segnis ATCC 21756]
gi|295431422|gb|ADG10594.1| L-carnitine dehydratase/bile acid-inducible protein F [Caulobacter
segnis ATCC 21756]
Length = 375
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/369 (41%), Positives = 223/369 (60%), Gaps = 11/369 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQDTVGYGKKSLCINLKKA 61
L G+ ++EFAG+ P PFCGM+L++ GA V+R+D+ G + D G++S+ ++LK
Sbjct: 6 LSGLKIVEFAGIGPGPFCGMLLSDLGADVVRVDRKGQGRGSPADVTARGRRSVALDLKHP 65
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ L Q+D ++E FR GVME+L LGPDV +P+L+Y R++G+GQ GPY+ A
Sbjct: 66 DSIETCLKLLEQADGLIEGFRPGVMERLGLGPDVALARSPKLVYGRMTGWGQTGPYAKAA 125
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ ++G L +G +++ P PP NL DFGGG L A G++ + +G+GQVI
Sbjct: 126 GHDMNYIAITGALDAIGTQDK-PVPPLNLVGDFGGGALYLAFGLLAGVIHARATGQGQVI 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
DC M +G+A L + + +W++ R NLLDGGAHFYDTY+ DG+++++G++E QF
Sbjct: 185 DCAMSDGAASLMAMFYGFKAGGMWNEGRRTNLLDGGAHFYDTYQCADGKWISIGSIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
Y LL G+++ + QH++ R KL + K + EWC I D TD C PVL+
Sbjct: 245 YLLLLEKTGISDPQF-QHQMSREEWPELREKLAAVIRTKPRDEWCAIMDATDVCFAPVLT 303
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+ +A H HN R +F+ GV PAPAPR S TPG I P G H L +G
Sbjct: 304 MDEAPKHAHNAARQTFV-EVEGVTQPAPAPRFSATPGA--IQGPPPKIGAHNDAALADWG 360
Query: 357 YSDANIEEL 365
+S I L
Sbjct: 361 FSVDAIAGL 369
>gi|377569385|ref|ZP_09798550.1| alpha-methylacyl-CoA racemase [Gordonia terrae NBRC 100016]
gi|377533438|dbj|GAB43715.1| alpha-methylacyl-CoA racemase [Gordonia terrae NBRC 100016]
Length = 370
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 218/336 (64%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G+ P D + G++ + NLK
Sbjct: 15 LSSIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGSLPTPGRNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
A + L ++DVILE FR GVME+L LGPD L K NP L+Y R++G+GQDGP ++
Sbjct: 75 DANDRETILGLVAKADVILEGFRPGVMERLGLGPDDLEKVNPGLVYGRMTGWGQDGPRAN 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G ++ P PP NLA DFGGG + +G++ AL ER SGRGQ
Sbjct: 135 LAGHDINYISLTGMLHAIGRKDDRPVPPLNLAGDFGGGSMFLVVGVLAALLERGISGRGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWSDTRGVNMLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELP-QHEV-ETGRAK--LTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GL + + +LP Q+++ + G K TE FK +T+ EW +F+ TDAC +PVL
Sbjct: 255 QFYAELLKGLELADADLPDQNDISQWGNLKEVFTETFKTRTRDEWAAVFEGTDACTSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A + H R + + + GV APR SRT
Sbjct: 315 TFAEAPADAHMAARANLV-DIDGVTQAQVAPRFSRT 349
>gi|226184037|dbj|BAH32141.1| probable alpha-methylacyl-CoA racemase [Rhodococcus erythropolis
PR4]
Length = 361
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 216/336 (64%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L GI ++EFAGL P P +L + GA ++ + + G P D + G++ + NLK
Sbjct: 7 LAGIRIVEFAGLGPGPHAATLLADMGADIVIVQRAGQIPQDSNATDQIKRGRRIVEANLK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
++ + +L ++DV++E FR GVME++ LGPDV+ + NPRL+YAR++G+GQ+GP ++
Sbjct: 67 DPADVAKVLDLLGRADVLIEGFRPGVMERMGLGPDVVSERNPRLVYARMTGWGQEGPLAN 126
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L+ +G + P PP N+ DFGGG + GI+ AL ERS SG+GQ
Sbjct: 127 AAGHDINYISLTGVLNAIGRKGERPVPPLNMVGDFGGGSMFLIFGILSALVERSTSGKGQ 186
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G+ L + + +W RG NLLD GA FYDTYET DG++MAVG++E
Sbjct: 187 VVDAAMVDGTLALSHMMWAFRGRGVWSDERGVNLLDTGAPFYDTYETSDGKYMAVGSIEP 246
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAK-----LTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA LL GL + LP H+++T + TEKF KT+ EW +IF TDACV+PV
Sbjct: 247 QFYALLLEGLELDPATLP-HQMDTSKWDDMKTLFTEKFLSKTRDEWAKIFLGTDACVSPV 305
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
L+ ++A S+ H RGS I GV APAPR SR
Sbjct: 306 LTFAEAPSNEHIAARGSLI-ELDGVTQHAPAPRFSR 340
>gi|262203639|ref|YP_003274847.1| alpha-methylacyl-CoA racemase [Gordonia bronchialis DSM 43247]
gi|262086986|gb|ACY22954.1| Alpha-methylacyl-CoA racemase [Gordonia bronchialis DSM 43247]
Length = 370
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 213/336 (63%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G+ P D + G++ + NLK
Sbjct: 15 LSAIRVIEFAGIGPGPHAAMMLADLGADVVRVQRPGSLPAEGRNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L ++DV++E FR GVME+L GPD L NP L+Y R++G+GQ+GP ++
Sbjct: 75 DPADRETILGLIAKADVVIEGFRPGVMERLGFGPDDLESVNPGLVYGRMTGWGQEGPRAN 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G ++ P PP NLA DFGGG + +G++ AL ER SGRGQ
Sbjct: 135 LAGHDINYISLTGMLHAIGRKDDRPVPPLNLAGDFGGGSMFLVMGVLAALLERQSSGRGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWSDVRGVNMLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GLG+ +LP+ KL TE FK +T+ EW +IFD+TDAC +PVL
Sbjct: 255 QFYAELLNGLGLAGADLPEQNDIANWGKLKEVFTETFKSRTRDEWTKIFDDTDACTSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A PH R + + GV+ APR SRT
Sbjct: 315 TFAEAPEDPHMSARSNLV-EIDGVMQAQVAPRFSRT 349
>gi|408373657|ref|ZP_11171352.1| CAIB/BAIF family protein [Alcanivorax hongdengensis A-11-3]
gi|407766584|gb|EKF75026.1| CAIB/BAIF family protein [Alcanivorax hongdengensis A-11-3]
Length = 380
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/380 (42%), Positives = 229/380 (60%), Gaps = 14/380 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYG-----KKSLCIN 57
L G+T +E AG+ P PFCGM+L + GATVIR+D+ G P +G+ +++L ++
Sbjct: 5 LHGLTFIELAGIGPGPFCGMMLADMGATVIRVDRPGGNPHA--AIGHSILFRNRQNLALD 62
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G+ + L +D + E FR GV E+L +GP+ NP+L+Y R++G+GQ GP
Sbjct: 63 LKSPQGIETILRLCESADGLFEGFRPGVAERLGVGPEQCQARNPKLVYGRMTGWGQTGPL 122
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ LSG L +G P P NL DFGGGG+M A G+V A E +SG+
Sbjct: 123 AQAAGHDMNYISLSGALHAMGRAGEKPAIPLNLVGDFGGGGMMLAFGMVCAALEAQRSGQ 182
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +MVEGSA L + + L+ RG ++LD GA FY+ YET DG+++++G++
Sbjct: 183 GQVVDSSMVEGSAALMAMFYGLRSQGLFTDNRGTHMLDSGAPFYEVYETADGKYVSIGSI 242
Query: 238 ESQFYAQL--LAGLGMTE--EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYAQL LA L + +L + KL K+KT+ +W + + TD C P
Sbjct: 243 EPQFYAQLCQLAQLPAEDFGNQLDMQRWPQMKEKLAAVIKQKTRDQWTALMEGTDVCFAP 302
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VL L +A HPHN R SF+ GVV PAP PR SR+ G +I +PG TR VL
Sbjct: 303 VLGLEEAPDHPHNRARESFV-TVNGVVQPAPTPRFSRS-GAPQI-RGAASPGADTRAVLS 359
Query: 354 HFGYSDANIEELIREDVIEE 373
G+SDA+I+ LI +++
Sbjct: 360 QAGFSDADIDNLIAGGAVKQ 379
>gi|403510273|ref|YP_006641911.1| coA-transferase III family protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402801912|gb|AFR09322.1| coA-transferase III family protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 364
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 161/366 (43%), Positives = 221/366 (60%), Gaps = 14/366 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVG----YGKKSLCIN 57
L GI V+EF GL PAP GM+L + GA V+RID+ A+ G G+ + I+
Sbjct: 4 LNGIRVVEFTGLGPAPMTGMLLADLGADVVRIDRPQAAEAMRSGAPGPHMCEGRAVVGID 63
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G ++L ++DV+LE FR GVME+L LGPD + NPRL+YAR++G+GQDGP
Sbjct: 64 LKSEEGRETARDLIGRADVLLEGFRPGVMERLGLGPDDCHEINPRLVYARVTGWGQDGPL 123
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ ++G L +G + P PP NL DFGGG + GI+ AL ER SGR
Sbjct: 124 AHTAGHDMNYVSVNGALHSIGRADGPPIPPINLLGDFGGGTMFTITGILAALVERQTSGR 183
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+G + L S + + W RG N LD GA +YD YE DGR ++VG +
Sbjct: 184 GQVVDAAMVDGVSLLMSMVHEDRSRGAWSDERGTNYLDTGAPWYDVYECADGRHLSVGCI 243
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKF----KEKTQAEWCEIFDNTDACVTP 293
E +FY L G+G+ EE+LP+ L E+F + +T+ EW IF+ TDACV P
Sbjct: 244 EPKFYRAFLEGVGLAEEDLPEQWDTENWPALRERFAKVLRTRTRDEWGRIFEGTDACVMP 303
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
+LS+ +A HPH RGS + + ++A PAPR RTPG +T P P + EVLR
Sbjct: 304 ILSMEEAPGHPHVRARGSLVREKGRIMA-GPAPRFDRTPG--GVTRGGPLPDID--EVLR 358
Query: 354 HFGYSD 359
+G +D
Sbjct: 359 DWGVTD 364
>gi|374366233|ref|ZP_09624315.1| L-carnitine dehydratase/bile acid-inducible protein f [Cupriavidus
basilensis OR16]
gi|373102202|gb|EHP43241.1| L-carnitine dehydratase/bile acid-inducible protein f [Cupriavidus
basilensis OR16]
Length = 385
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 226/384 (58%), Gaps = 18/384 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----------HGAQPFVQDTVGYGK 51
L G+ V+E G+ PAPFC M+L + GA VIRID+ GA D G+
Sbjct: 5 LAGLKVVEMVGIGPAPFCAMMLADQGAEVIRIDRPRPAKPGEAPATGAGRAQCDVTARGR 64
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
+SL I+L+K V+ +L ++DV++E FR GVME+L LGP NP L+Y R++G+
Sbjct: 65 RSLAIDLRKPGAAEVVLDLIAKADVLIEGFRPGVMERLGLGPQPCLARNPALVYGRMTGW 124
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQ GP + AGHDINY+ + G L +G P P N DFGGGG++ A G++ A+ E
Sbjct: 125 GQHGPLAQAAGHDINYIAIGGALHAIGRAGEPPVVPLNYVGDFGGGGMLLAFGVMCAVNE 184
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
SG+GQV+D M +G+A L + + + W RG+NLLDG AHFYDTY DG++
Sbjct: 185 ARNSGKGQVVDAAMTDGTALLSAMMYGFKAAGRWTNQRGDNLLDGAAHFYDTYACADGKY 244
Query: 232 MAVGALESQFYAQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNT 287
+AVGA+E QFYA L G+ +++L + +A++T F +T+A+WCE+ + +
Sbjct: 245 VAVGAIEPQFYALLRERCGLDDPLFDKQLDKRHWPELKARMTTLFLTRTRAQWCELLEGS 304
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH 347
DAC PVL +A HPHN R +F+ GV+ PAPAPR SRTP + + + PG
Sbjct: 305 DACFAPVLDWDEAPQHPHNRARETFL-EIDGVMQPAPAPRFSRTP--AAVPQAPVEPGAD 361
Query: 348 TREVLRHFGYSDANIEELIREDVI 371
+ VLR +G + I L R+ VI
Sbjct: 362 SEAVLRDWGVAGEVISGLRRDGVI 385
>gi|326387902|ref|ZP_08209508.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium nitrogenifigens DSM 19370]
gi|326207948|gb|EGD58759.1| L-carnitine dehydratase/bile acid-inducible protein F
[Novosphingobium nitrogenifigens DSM 19370]
Length = 349
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/343 (48%), Positives = 224/343 (65%), Gaps = 15/343 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-----QDTVGYGKKSLCI 56
AL+G+TV+EFAG+ P PF M+L + GA VIRI++ G V +D + +K L +
Sbjct: 4 ALEGLTVIEFAGIGPGPFACMMLADHGARVIRIERPGVAGKVGDGGNRDILNRNRKRLVL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
++K + L+ +++L +D ++E FR GVME+L LGP+VL K NPRL+Y R++G+GQDGP
Sbjct: 64 DMKDPRSLARIRDLVRDADALVEGFRPGVMERLGLGPEVLLKDNPRLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHDINY+ LSG L G P P N DFGGGG+M A GI+ A+F ++G
Sbjct: 124 MAARAGHDINYIALSGALHTYGPAGEKPVFPVNAVGDFGGGGMMMAFGIMAAVFSAQRTG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+DC MV+G+A L + W RG NLLDGG HFYDTYET DG++++VG+
Sbjct: 184 KGQVVDCAMVDGAAILSAMTWSFYGNGQWRDRRGVNLLDGGTHFYDTYETADGKWISVGS 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-------RAKLTEKFKEKTQAEWCEIFDNTDA 289
+E QFYA LL G ++ P EV+ +A+L F +T+AEWC +FD TDA
Sbjct: 244 IEPQFYALLLEKTGFADD--PAFEVQMNPALWPGLKARLAALFLTRTRAEWCAVFDGTDA 301
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
CV PVLSLS+A HPHN RG+F+ G+V PAPAPR S TP
Sbjct: 302 CVVPVLSLSEAPGHPHNAARGTFV-EEDGMVMPAPAPRFSETP 343
>gi|408397519|gb|EKJ76661.1| hypothetical protein FPSE_03211 [Fusarium pseudograminearum CS3096]
Length = 400
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/309 (48%), Positives = 209/309 (67%), Gaps = 7/309 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG--AQPFVQDTVGYGKKSLCINLKK 60
L GI VLEFAGLAP P+ GM+L + GA+V+RID+ A +D + K S+ ++LK
Sbjct: 7 LTGIKVLEFAGLAPGPYAGMLLADAGASVLRIDRASSDASRPTEDVLARHKASISVDLKS 66
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G++++K LA +DV+++PFR GV+EKL LGPDVLC N RLIY+R++G+ +DG Y+ M
Sbjct: 67 ERGIALIKRLAAHADVLIDPFRPGVLEKLGLGPDVLCNLNKRLIYSRMTGFRRDGKYALM 126
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL +SG L +LG P PP N+ ADF GGG + GI+MA+ R SG GQV
Sbjct: 127 AGHDINYLAVSGTLGMLGREGEKPHPPMNILADFAGGGAILFQGILMAVISRQSSGLGQV 186
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
++ NMV+GS++L ++ T + ++ RG+NLLDG A FYDTYET DG++MAVGALE+Q
Sbjct: 187 VEANMVDGSSHLTTFPRMGLKTPIGNRGRGKNLLDGAAPFYDTYETSDGKYMAVGALETQ 246
Query: 241 FYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
F+A LL GLG+ + + + + R + +KF+ K +AEW +FD TDAC TPVL
Sbjct: 247 FFAALLKGLGLVNQGWEKDQQDRTRWPDLRKLMADKFRSKNRAEWEAVFDGTDACCTPVL 306
Query: 296 SLSQATSHP 304
+ P
Sbjct: 307 EYGELERDP 315
>gi|145242766|ref|XP_001393956.1| alpha-methylacyl-CoA racemase [Aspergillus niger CBS 513.88]
gi|134078512|emb|CAK40434.1| unnamed protein product [Aspergillus niger]
gi|350640231|gb|EHA28584.1| hypothetical protein ASPNIDRAFT_54297 [Aspergillus niger ATCC 1015]
Length = 379
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 152/299 (50%), Positives = 203/299 (67%), Gaps = 8/299 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E AGLAP PF G++L ++GA+V+RID+ A+ D + K S I+L+
Sbjct: 5 LDGIRVVELAGLAPGPFTGLLLADYGASVLRIDRPKAK--SADQLTRRKTSATIDLRDPA 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSSMA 121
V+ + +DV+++P+R GV+E+L L P +VL K NPRLI ARL+G+ +DG Y MA
Sbjct: 63 SHRVLLSALKDADVLIDPYRPGVLERLGLSPSEVLLKHNPRLIVARLTGFRRDGKYKDMA 122
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ ++G+LS++G P PP NL DF GGG C LGI++AL R+ +GRGQV+
Sbjct: 123 GHDINYIAVAGVLSMIGRSGERPYPPLNLLGDFAGGGATCFLGILLALISRTHTGRGQVV 182
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQ 240
+ NMV+GSAYL + + T WD PRG+N LDGG+ FYDTYETKD G++ AVGALE Q
Sbjct: 183 EANMVDGSAYLAAMPRLGRQTPFWDAPRGQNTLDGGSPFYDTYETKDKGKYFAVGALEPQ 242
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY LL GL + EELP + + RA ++FKEKT+AEW +FD TDAC TPVL
Sbjct: 243 FYDALLKGLELNPEELPPRDNKDNWPALRAAFAKRFKEKTRAEWEAVFDGTDACATPVL 301
>gi|407276189|ref|ZP_11104659.1| alpha-methylacyl-CoA racemase [Rhodococcus sp. P14]
Length = 365
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 209/336 (62%), Gaps = 7/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV--QDTVGYGKKSLCINLKK 60
L GI V+EFAGL P P +L + GA V+ + + G P +D + G++ + +LK
Sbjct: 12 LAGIRVVEFAGLGPGPHAATLLADLGADVVCVQRPGLIPPAGHRDQIQRGRRVVEADLKD 71
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ + + L ++DV++E FR GV E++ LGPDV NPRL+Y R++G+GQ+GP +
Sbjct: 72 PEQVEKVLGLIERADVLIEGFRPGVTERMGLGPDVALARNPRLVYGRMTGWGQEGPLAHA 131
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQV
Sbjct: 132 AGHDINYISLTGVLHAVGRKGERPVPPLNMVGDFGGGSMFLIFGILSALVERQSSGKGQV 191
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+G+ L + + +W RG NLLD GA FYD YET DGR+MAVG++E Q
Sbjct: 192 VDAAMVDGALALSHMMWAFRGRGVWSDERGVNLLDTGAPFYDVYETADGRYMAVGSIEPQ 251
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL GL + ELPQ + ++ TEKF KT+ EW IFD TDACV+PVL+
Sbjct: 252 FYALLLQGLELDPAELPQQLDTSAWPQMKKLFTEKFLSKTRDEWAAIFDGTDACVSPVLT 311
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A ++PH RGS I GV APAPR SRTP
Sbjct: 312 FGEAPANPHIAARGSLI-ELDGVTQHAPAPRFSRTP 346
>gi|424860826|ref|ZP_18284772.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
gi|356659298|gb|EHI39662.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
Length = 384
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 223/373 (59%), Gaps = 13/373 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQ--DTVGYGKKSLCI 56
L GI ++E G+ P PFC M+L++ GA +IRID+ G P + + G++S +
Sbjct: 8 LAGIKIVELGGVGPVPFCCMLLSDLGADIIRIDRPPGYDGGAPVDPRFNLLNRGRRSAAM 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + + +L ++DV++E FR GV EKL +GPD NP L+Y R++G+GQDGP
Sbjct: 68 DLKNEAAVGAVLDLVRRADVLVEGFRPGVAEKLGIGPDDCLAVNPALVYGRMTGWGQDGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD NY+ L+G+L +G ++ PT P NLA DFGGG L ALG+V AL E SG
Sbjct: 128 LAQAAGHDANYISLTGVLHAIGAKDGPPTLPLNLAGDFGGGSLYLALGVVSALLESRLSG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQVID MV+GSA L + W RG N LD GA +Y+ YET DGR+++V
Sbjct: 188 RGQVIDAAMVDGSASLMALFYGLHAAGYWHDERGTNRLDSGAPWYNVYETSDGRWLSVAC 247
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVT 292
E +F+ L LG+ E E+P T ++ E+ F+ +T+ EWC + + DAC
Sbjct: 248 NEDRFWRNTLRLLGLNETEMPDQHDRTRWPEMQERLAAVFRTRTRDEWCALAEGEDACWA 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLSL++A H H V RG+F AGVV PAPAPR SRTPG I APG HT +VL
Sbjct: 308 PVLSLTEAPRHEHLVARGTFT-EVAGVVQPAPAPRFSRTPGA--IQGPPAAPGQHTDDVL 364
Query: 353 RHFGYSDANIEEL 365
+G++ + L
Sbjct: 365 GDWGFTAEQLAAL 377
>gi|452982380|gb|EME82139.1| hypothetical protein MYCFIDRAFT_188925 [Pseudocercospora fijiensis
CIRAD86]
Length = 412
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 152/308 (49%), Positives = 209/308 (67%), Gaps = 16/308 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQ---PFVQDTVGYGKKSL 54
L G+ VLEFAGLAP P+ G++ ++GA+V+R+D+ HG P D + K S+
Sbjct: 11 LAGLRVLEFAGLAPGPYAGLLCADYGASVLRVDRAHPKAHGGSDPPPVTPDQLTRHKTSI 70
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQ 113
+N K KG+ ++K + DV+++PFR GV+EK+ LGP+ VL K NP++I AR++G+ +
Sbjct: 71 AVNTKTPKGVELIKAIIPNIDVVIDPFRPGVLEKMGLGPEEVLLKINPKVIVARMTGFRR 130
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
DG Y MAGHDINY+ +SG+L ++G P P N+ DF GGG +C +GI++AL +R
Sbjct: 131 DGKYKDMAGHDINYIAVSGVLGMMGRAGGKPYAPANIVGDFAGGGAVCFMGILLALLQRE 190
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
KSG GQV++ NMV+GSA+L S T LWD+ RG N LDGG +YDTYETKDG++MA
Sbjct: 191 KSGHGQVVEANMVDGSAHLASMPRFGTKTPLWDQERGTNTLDGGCPYYDTYETKDGKYMA 250
Query: 234 VGALESQFYAQLLAGLGMTEEEL--PQHEVET-----GRAKLTEKFKEKTQAEWCEIFDN 286
VGALE QFYA+LL GLG+ E+ P+ +E R T+ FKEKT+AEW ++FD
Sbjct: 251 VGALEPQFYAELLKGLGLKPEDAFSPKDRLEKRTWDHQRVVFTKLFKEKTRAEWEKVFDG 310
Query: 287 TDACVTPV 294
TDACVTPV
Sbjct: 311 TDACVTPV 318
>gi|229492996|ref|ZP_04386791.1| alpha-methylacyl-CoA racemase [Rhodococcus erythropolis SK121]
gi|229320026|gb|EEN85852.1| alpha-methylacyl-CoA racemase [Rhodococcus erythropolis SK121]
Length = 366
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 215/336 (63%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L GI ++EFAGL P P +L + GA ++ + + G P D G++ + NLK
Sbjct: 12 LAGIRIVEFAGLGPGPHAATLLADMGADIVIVQRAGQIPQDSNATDQTKRGRRIVEANLK 71
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
++ + +L ++DV++E FR GVME++ LGPDV+ + NPRL+YAR++G+GQ+GP ++
Sbjct: 72 DPADVAKVLDLLGRADVLIEGFRPGVMERMGLGPDVVSERNPRLVYARMTGWGQEGPLAN 131
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L+ +G + P PP N+ DFGGG + GI+ AL ERS SG+GQ
Sbjct: 132 AAGHDINYISLTGVLNAIGRKGERPVPPLNMVGDFGGGSMFLIFGILSALVERSTSGKGQ 191
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G+ L + + +W RG NLLD GA FYDTYET DG++MAVG++E
Sbjct: 192 VVDAAMVDGTLALSHMMWAFRGRGVWSDERGVNLLDTGAPFYDTYETSDGKYMAVGSIEP 251
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAK-----LTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA LL GL + LP H+++T + TEKF KT+ EW +IF TDACV+PV
Sbjct: 252 QFYALLLEGLELDPATLP-HQMDTSKWDDMKKLFTEKFLSKTRDEWAKIFLGTDACVSPV 310
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
L+ ++A S+ H RGS I GV APAPR SR
Sbjct: 311 LTFAEAPSNEHIAARGSLI-ELDGVTQHAPAPRFSR 345
>gi|254482208|ref|ZP_05095449.1| CAIB/BAIF family protein [marine gamma proteobacterium HTCC2148]
gi|214037533|gb|EEB78199.1| CAIB/BAIF family protein [marine gamma proteobacterium HTCC2148]
Length = 383
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 154/383 (40%), Positives = 225/383 (58%), Gaps = 15/383 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ------DTVGYGKKSLCI 56
L GIT++E AGL P PF M L + GA+VIRI++ G F D + GK+ + +
Sbjct: 4 LAGITIIEIAGLGPGPFAAMSLADMGASVIRIERPGGGLFAAQQDSRLDVLNRGKRCIGV 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G+ + L +++D +LE R GVME+L LG D+ + NP+L+Y R++G+GQ+GP
Sbjct: 64 DLKTPEGVDTVLTLIDKADGLLEGNRPGVMERLGLGSDICLQRNPKLVYGRMTGWGQEGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ GHD+NY+ L+G L +G P P NL DFGGGG+M A G+V AL E SG
Sbjct: 124 LANEVGHDLNYIALTGALHTMGRAGEKPAIPLNLVGDFGGGGMMLAYGMVCALLESKTSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D MV+G+A L + W RG N+LD GAHFY+ YET DG+++ + +
Sbjct: 184 AGQVVDAAMVDGAATLMASSYAANQIGFWSDERGTNVLDSGAHFYEVYETADGKYVTIAS 243
Query: 237 LESQFYAQLLAGLGM----TEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E QFYA L+ LG E + + KL FK++T+ +W FD D C
Sbjct: 244 VEPQFYAALIEALGEDVEGMENQWDMANWPAFKNKLEAVFKQRTREQWDSFFDGLDICYA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP-GVHTREV 351
PVLS+++ HPH+ RG+F+ + V PAPAPR SRTPG + PA G H+ E+
Sbjct: 304 PVLSMAEVRHHPHHQARGTFV-DDGEVWQPAPAPRFSRTPGE---VQRPPAKIGAHSTEI 359
Query: 352 LRHFGYSDANIEELIREDVIEET 374
L FG+ I+ L++ +++
Sbjct: 360 LTEFGFGQDAIDALLKSGAVKQA 382
>gi|365092746|ref|ZP_09329829.1| putative acyl-CoA transferase/carnitine dehydratase [Acidovorax sp.
NO-1]
gi|363415173|gb|EHL22305.1| putative acyl-CoA transferase/carnitine dehydratase [Acidovorax sp.
NO-1]
Length = 366
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 225/368 (61%), Gaps = 24/368 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------HGAQPFV----QDTVGYGK 51
L+G+ V+EF G+ P PFC M+L++ GA VIR+D+ G F+ + + G+
Sbjct: 5 LQGLKVIEFGGIGPGPFCAMMLSDMGADVIRLDRKADKGKDRGEGAFLASGRRSVLHRGR 64
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
+S+ ++LK + + L + +D I+E FR GVME+L LGPDVL +PRL+Y R++G+
Sbjct: 65 RSVAVDLKSPADVQRVLELVDGADAIIEGFRPGVMERLGLGPDVLLARHPRLVYGRMTGW 124
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQDGP + AGHDINY+ LSG LS++G + P P + D GGGG++ A GIV AL E
Sbjct: 125 GQDGPLAQAAGHDINYIALSGALSMIGRSDGGPVAPPAMVGDLGGGGMILAFGIVCALLE 184
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
SG GQV+D + +G+A L S + + +W R NLLDGG+HFYDTYE DG++
Sbjct: 185 ARSSGHGQVVDAAITDGAALLTSIVCDLKALGMWKNERQANLLDGGSHFYDTYECADGKW 244
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHE----VETGRAKLTEKFKEKTQAEWCEIFDNT 287
+++ +LE QFY LL LG+++ E + T + ++T+ F+ + WC + + T
Sbjct: 245 ISIASLEPQFYVLLLEKLGISDPEFQRQRDPAVWPTLKRQVTDIFRTQPSTHWCALLEGT 304
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEH-NPAP-- 344
D C PVL+L +A HPHN RG+F R GV+ P+PAPR SRT +T+ PAP
Sbjct: 305 DVCFAPVLTLEEAAHHPHNSARGTFF-ERDGVLQPSPAPRFSRT-----VTDRPGPAPFI 358
Query: 345 GVHTREVL 352
G H E+L
Sbjct: 359 GEHDDELL 366
>gi|255949054|ref|XP_002565294.1| Pc22g13680 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592311|emb|CAP98656.1| Pc22g13680 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 377
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 152/303 (50%), Positives = 208/303 (68%), Gaps = 8/303 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
LKGI V+E AGLAP PF G++L + GA+V+RID+ + D + K S+ ++L+
Sbjct: 4 LKGIKVIELAGLAPGPFTGLLLADNGASVLRIDR--PKSISGDQLTRNKTSITLDLRDKT 61
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSSMA 121
L+++ L +D++++PFR GV+E+L L P +VL K NPRLI AR++G+ +DG Y MA
Sbjct: 62 SLNILLRLLTAADILIDPFRPGVLERLGLSPTEVLLKHNPRLIVARMTGFRRDGKYKDMA 121
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ +SG+LS+LG P P N+ DF GGG +C GI++AL RS +GRGQV+
Sbjct: 122 GHDINYIAVSGVLSMLGRTGEKPHAPGNILGDFAGGGAVCFQGILLALISRSHTGRGQVV 181
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQ 240
+ NMV+GSAYL ++ ++T W +PRGENLLDGG +YDTYETKD GR+ AVGALE Q
Sbjct: 182 EANMVDGSAYLATFPRLGRNTPAWSEPRGENLLDGGCPYYDTYETKDAGRYFAVGALEPQ 241
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA L+ GLG +LP+ E R T++FKEKT+AEW +FD TDAC TPVL
Sbjct: 242 FYAALVRGLGFDMGQLPKREDREQWPVLREIFTKRFKEKTRAEWEAVFDGTDACATPVLE 301
Query: 297 LSQ 299
++
Sbjct: 302 QAE 304
>gi|453052082|gb|EME99572.1| Alpha-methylacyl-CoA racemase [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 373
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 159/363 (43%), Positives = 217/363 (59%), Gaps = 15/363 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF GM+L + GA V+R+D+ G +D K+S+C++L
Sbjct: 5 LAGVRVVELAGIGPGPFAGMLLGDLGADVVRVDRPGGPGLGIDPRRDVTHRNKRSVCVDL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + L ++DV+LE +R GV E+L +GP NPRL+Y R++G+GQDGP +
Sbjct: 65 KTDGGAEAVLGLVERADVLLEGYRPGVAERLGVGPGPCLARNPRLVYGRMTGWGQDGPLA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ ++G L L G + P PP NL D+ GG L +G++ AL +G G
Sbjct: 125 RTAGHDIGYIAVTGALGLTGPADGPPYPPANLLGDYAGGSLYLVVGVLAALLHARATGTG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + L W RG NLLDGGA FY YET DG MAVGALE
Sbjct: 185 QVVDAAIVDGTAHLTAMLRGMLAAGAWQDRRGGNLLDGGAPFYGVYETSDGGHMAVGALE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+FY + LG+ E + + G R + E+F+ +T+AEW +F+ TDACV P
Sbjct: 245 PRFYEEFARLLGLDGETAAGRD-DPGRWGGLREAVAERFRRRTRAEWTAVFEGTDACVAP 303
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVL 352
VLSL +A HPH RG+F +R GVV PAPAPR S TPG+ + PA PG HT EV
Sbjct: 304 VLSLGEAPGHPHLAARGTFA-DRDGVVQPAPAPRFSATPGSLR---RPPAPPGAHTEEVA 359
Query: 353 RHF 355
R +
Sbjct: 360 RDW 362
>gi|343924069|ref|ZP_08763632.1| alpha-methylacyl-CoA racemase [Gordonia alkanivorans NBRC 16433]
gi|343765874|dbj|GAA10558.1| alpha-methylacyl-CoA racemase [Gordonia alkanivorans NBRC 16433]
Length = 381
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 171/359 (47%), Positives = 224/359 (62%), Gaps = 12/359 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRID---KHGAQPF-VQDTVGYGKKSLCINL 58
L G+ VLE A APAPF M+L + GA V+ +D K G P D + ++S+ +L
Sbjct: 5 LTGVRVLEIASAAPAPFACMMLADLGADVVTVDRPAKPGRTPRRPNDPLVRSRRSVVADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G++ ++ LA +DV++E FR GVME+L LGPD L NP LI+AR++GYGQ+GP S
Sbjct: 65 KNPAGVATVRRLAANADVLVEGFRPGVMERLGLGPDDLAVVNPGLIFARMTGYGQEGPLS 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+ AGHDINY+ ++G L +G P PP NL DFGGGG++ A+GI+ AL ERS SGRG
Sbjct: 125 ARAGHDINYIAVAGALEPIGRAGERPLPPLNLIGDFGGGGMLLAVGILAALHERSTSGRG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+G+A L S++ + W RG NLLDGGA FYDTY T DGR+MAVGALE
Sbjct: 185 QVVDAAMVDGAALLTSFVHGVRADGHWSDERGTNLLDGGAPFYDTYLTADGRYMAVGALE 244
Query: 239 SQFYAQLLAGLGMTEEE-LPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+FY QLL GL + ++ LP G R++ F +T+ EW EIF + DACV+P
Sbjct: 245 RRFYQQLLTGLDLDDDPGLPGQMDRDGWPELRSRFAAAFATRTRREWTEIFADLDACVSP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
VL+ +A H V R FI + GV PAPAPR SRTP + PG T +VL
Sbjct: 305 VLAPGEAPDGEHAVARTGFI-DVGGVRQPAPAPRFSRTPAATPSAPR--LPGEDTEQVL 360
>gi|346327132|gb|EGX96728.1| alpha-methylacyl-CoA racemase [Cordyceps militaris CM01]
Length = 400
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 156/309 (50%), Positives = 211/309 (68%), Gaps = 9/309 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI VLEFAGLAP PF GM+L + GATV+R+++H P QD + K S+ ++LK A
Sbjct: 7 LTGIKVLEFAGLAPGPFAGMMLADAGATVLRVNRHNDAP--QDMLARHKASIAVDLKSAG 64
Query: 63 GLSVMKNL--ANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G++++K L + DV+++PFR GV+E+L LGP+ L + NPRL+YAR++GY +DG Y+ M
Sbjct: 65 GIALLKTLLASGGVDVLIDPFRPGVLERLGLGPEPLLQLNPRLVYARITGYRRDGRYAHM 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+G+SG LSLLG + P PP N+ DF GGG GI++AL R+ +GRGQV
Sbjct: 125 AGHDINYIGVSGALSLLGAAGQRPQPPVNILGDFAGGGATLFQGILLALLARATTGRGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
++ NMV+GS+YL ++ + T L DKPRG+N LDGG +Y YET D ++ VGALE Q
Sbjct: 185 VEANMVDGSSYLATFPRMARATPLADKPRGQNTLDGGCPWYGCYETADALWVTVGALEPQ 244
Query: 241 FYAQLLAGLGMT----EEELPQHEVETGRAKL-TEKFKEKTQAEWCEIFDNTDACVTPVL 295
F+AQL+AGLG+ E+E E A L T+ FK KT+AEW +FD TDACV PVL
Sbjct: 245 FFAQLVAGLGLAGRGWEDERGDEERWPELAALFTDIFKTKTRAEWEAVFDGTDACVAPVL 304
Query: 296 SLSQATSHP 304
+ + P
Sbjct: 305 DYDELRTDP 313
>gi|392417787|ref|YP_006454392.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
chubuense NBB4]
gi|390617563|gb|AFM18713.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
chubuense NBB4]
Length = 364
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 157/362 (43%), Positives = 224/362 (61%), Gaps = 12/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGY---GKKSLCIN 57
L+G+ V+E AG+ P P MIL + GA V+RI++ GA P + Y ++S+ N
Sbjct: 5 LQGLRVVELAGIGPGPHAAMILGDLGADVVRIERPGKGAGPATTPSRDYLLRNRRSVAAN 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + + +L ++DV++E FR GV E+L LGP+ K N LIYAR++G+GQ GP
Sbjct: 65 LKDPDDVKRVLSLIGKADVLIEGFRPGVTERLGLGPEDCAKVNEGLIYARMTGWGQQGPR 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ L+G L +G P PP NL DFGGG + +G++ AL+ER +SG+
Sbjct: 125 AQQAGHDINYISLNGTLHAIGRAGERPVPPLNLVGDFGGGSMFLLVGVLSALWERQRSGK 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+GS+ L + + + +W RG N+LD GA +YDTY DGR++AVGA+
Sbjct: 185 GQVVDAAMVDGSSVLSTMMWAFRGMGMWSDERGVNMLDTGAPYYDTYTCADGRYVAVGAI 244
Query: 238 ESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYA++LAG+G+ ELP Q+++ RA+LTE F + + W E+F TDACVTP
Sbjct: 245 EPQFYAEMLAGVGLDVAELPDQNDMSRWPELRARLTEAFAAQDRDHWAEVFAGTDACVTP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLS ++ S PHN R +F G + PAPAPR SRT + + PG T V++
Sbjct: 305 VLSFAEVESEPHNTERDTFY-RENGYLYPAPAPRFSRT--ATSAPKPPGVPGADTEAVVQ 361
Query: 354 HF 355
+
Sbjct: 362 DW 363
>gi|309811562|ref|ZP_07705341.1| CoA-transferase family III protein [Dermacoccus sp. Ellin185]
gi|308434363|gb|EFP58216.1| CoA-transferase family III protein [Dermacoccus sp. Ellin185]
Length = 338
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 209/332 (62%), Gaps = 7/332 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY--GKKSLCINLKK 60
L+ +TV+E A LAPAPF M+L + GA V R+++ G+ T GK ++ +LK
Sbjct: 4 LEAVTVVELASLAPAPFGCMMLADLGAHVTRVERPGSGALDVPTAALDRGKTTIVADLKT 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
GL+ ++ LA+ +DV +E +R GV E+L +GPD L NPRL+Y R++G+GQ GP +
Sbjct: 64 PDGLAAVRELASAADVFVEAYRPGVAERLGVGPDDLLALNPRLVYVRMTGWGQHGPLAQT 123
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL LSG+L L P PP N+ ADF GGG++ A G++ AL R+ +GRGQV
Sbjct: 124 AGHDINYLALSGMLYPLARPGERPNPPTNVLADFAGGGMLLANGVLAALVARATTGRGQV 183
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+G++ ++L LW G NLLDGGA FYDTY DGR +AVGALE Q
Sbjct: 184 LDVAMVDGASLYSTFLRGLHAVGLWSGEPGTNLLDGGAPFYDTYTCADGRHVAVGALEPQ 243
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
F+A L+ GLG+ +P TG R LT F KT+ EW ++FD TDACVTPVL+
Sbjct: 244 FFAALVDGLGLDATTMPAQTDVTGWSRWREVLTATFATKTRDEWAQLFDGTDACVTPVLT 303
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
+A HPH V R +F+ + GV PAPAPR
Sbjct: 304 PWEAPHHPHAVGREAFV-DVDGVTMPAPAPRF 334
>gi|377563788|ref|ZP_09793119.1| alpha-methylacyl-CoA racemase [Gordonia sputi NBRC 100414]
gi|377529002|dbj|GAB38284.1| alpha-methylacyl-CoA racemase [Gordonia sputi NBRC 100414]
Length = 383
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 213/342 (62%), Gaps = 9/342 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L G+ V+EFAG+ P P M+L + GA VIRI + G P D + G++ + NLK
Sbjct: 28 LNGVRVVEFAGIGPGPHAAMMLADLGADVIRIQRPGQLPDPARNADALLRGRRVVEANLK 87
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L ++DV+LE FR GVME+L GP L N RL+Y R++G+GQDGP +
Sbjct: 88 DPADREEILRLIGKADVLLEGFRPGVMERLGFGPSDLESVNERLVYGRMTGWGQDGPRAP 147
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L +G P PP NL DFGGG + +G++ AL ER+ SGRGQ
Sbjct: 148 QAGHDINYISLTGMLHAIGREGERPVPPMNLVGDFGGGSMFLVMGVLAALVERASSGRGQ 207
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DGR+MAVGA+E
Sbjct: 208 VVDAAMVDGASVLGQMIWAFRGTGLWSDERGTNMLDTGAPYYEVYETSDGRYMAVGAIEP 267
Query: 240 QFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA++L GLG+T+ +LP Q++V R TE F +T+ EW ++FD TDACV+PVL
Sbjct: 268 QFYAEMLRGLGLTDADLPGQNDVANWPKLRQIFTETFASRTRDEWAKVFDGTDACVSPVL 327
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSK 336
+ ++A PH R + + GV APR SRT P T +
Sbjct: 328 TFAEAPDDPHMAARANLV-EIDGVRQAQVAPRFSRTAPSTPR 368
>gi|312197060|ref|YP_004017121.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
gi|311228396|gb|ADP81251.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
Length = 360
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 207/333 (62%), Gaps = 5/333 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VLE AGL P P GMIL + GA V+ + + Q D + G+ + ++LK
Sbjct: 5 LTGLRVLELAGLGPGPHAGMILADLGADVVHVSRPHEQAPDSDFLLRGRTATELDLKSPA 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G LA +DV+++PFR GV+E+L LGP +NPRL+YAR++G+GQDGP ++ AG
Sbjct: 65 GRDRALALAAGADVLIDPFRPGVLERLGLGPAACLAANPRLVYARITGWGQDGPLAARAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G+L+ +G P PP NL DFGGG + +GI+ AL+ER +SG GQV+D
Sbjct: 125 HDINYIALTGVLNAIGHAGDRPVPPLNLVGDFGGGSMFLLVGILAALWERERSGAGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + L + + W RG N LD GA +YDTYE DGR++AVGA+E +FY
Sbjct: 185 AAMVDGVSVLSQMIWSFRADGRWSDRRGTNALDSGAPYYDTYECADGRYVAVGAVEPKFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
AQLL GLG+ +LP G R ++ F+ + + EW +F + DACVTPVLS +
Sbjct: 245 AQLLDGLGLAAADLPAQRDRAGWPLLRDRIAAAFRSRGRDEWAVVFADRDACVTPVLSFA 304
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+A HP R +F P AG + PAPAPR SR+
Sbjct: 305 EAPDHPQLATRRTFAPV-AGDLQPAPAPRFSRS 336
>gi|381162286|ref|ZP_09871516.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora azurea NA-128]
gi|379254191|gb|EHY88117.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora azurea NA-128]
Length = 396
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/371 (43%), Positives = 232/371 (62%), Gaps = 11/371 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L+G+ V+E AGLAPAPF +L + GA V+R+D+ V +D + G++++ ++
Sbjct: 22 LRGLRVVELAGLAPAPFACTVLADLGAEVVRVDRVVEGEDVLAMPKDPLLRGRRTIGVDT 81
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G+ V+ L +DV +E FR GV E++ LGP + NPR++Y R++G+GQDGP +
Sbjct: 82 KTPEGVEVVLRLVEDADVFVEGFRPGVTERMGLGPADVHARNPRVVYGRITGWGQDGPLA 141
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+GLSG L +G P PP N ADFGGGG+ A+G++ ALFER SGRG
Sbjct: 142 HTAGHDINYIGLSGALHPIGRHGERPVPPVNFLADFGGGGMYLAMGVLAALFERQTSGRG 201
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +MV+GSA L + L + + LW+ RG N+LDGGA FYDTYET DGR++AVGA+E
Sbjct: 202 QVVDASMVDGSALLTTHLFGLKASGLWEGERGRNILDGGAPFYDTYETADGRYVAVGAIE 261
Query: 239 SQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
++F+A L+ L + + +P H + R L E ++T+ E + TDAC+TPV
Sbjct: 262 TKFFAALVDVLELDPDTVPSHLDPQQWPRLREVLAEAIGKRTRDELVARAEGTDACLTPV 321
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LS +A HPHN RG+F+ + GV PAP P+ RT ++ G T EVLR
Sbjct: 322 LSPWEAPEHPHNAARGTFV-DIDGVAQPAPGPKFDRT--PPELPHPPHPRGSDTVEVLRE 378
Query: 355 FGYSDANIEEL 365
GY D ++ L
Sbjct: 379 LGYGDDELDAL 389
>gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH RecName: Full=Isopenicillin N epimerase component 2; Short=IPN
epimerase component 2; AltName: Full=Isopenicillin N
epimerase acyl-CoA racemase component
gi|25809429|emb|CAD45624.1| isopenicillin N-CoA epimerase [Acremonium chrysogenum]
Length = 383
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 203/300 (67%), Gaps = 9/300 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G V+E AGLAP PFCGM+L ++GA+V+RID G + D + K S+CI+LK
Sbjct: 9 LSGKLVVELAGLAPGPFCGMLLADYGASVLRID--GPRSPKGDVLARNKSSICIDLKHPP 66
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSSMA 121
V+ ++ +++DV+++PFR GV+E+L L P +VL K+N RL+ ARL+G+ +DG Y MA
Sbjct: 67 SRKVLLSILSRADVLIDPFRPGVLERLGLSPTEVLLKANARLVVARLTGFRRDGKYQDMA 126
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL +SG+L++LG NP PP N+ DF GGG MC +GI++AL R +G GQV+
Sbjct: 127 GHDINYLAVSGVLAMLGRAGENPFPPANILGDFAGGGAMCVVGILLALVSRDATGLGQVV 186
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD--GRFMAVGALES 239
+ NMV+GSAYL + T W PRGEN+LDGG +Y TY TKD G++MAVGALE
Sbjct: 187 EANMVDGSAYLATMPRLATKTPFWGSPRGENVLDGGCPWYATYRTKDPGGKYMAVGALEP 246
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY L+ GLG+ + +LP E RA KF E+T++EW E+FD TDACVTPVL
Sbjct: 247 HFYEVLVRGLGLDKTDLPPREDRANWPRLRALFEAKFAERTRSEWAEVFDGTDACVTPVL 306
>gi|336258011|ref|XP_003343827.1| hypothetical protein SMAC_04486 [Sordaria macrospora k-hell]
gi|380091544|emb|CCC10675.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 400
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 214/306 (69%), Gaps = 15/306 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L G+ VLEFAGLAP PF G++L++ GA+V+RID+ + P Q D + K SL ++LK
Sbjct: 7 LTGLKVLEFAGLAPGPFAGLLLSDAGASVLRIDRAVSGPVAQQVPDQLTRHKSSLVVDLK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLC--KSNPRLIYARLSGYGQDGPY 117
G+S++K+LA SDV+++P+R GV+EKL LGP VLC + NPRLIYARL+G+ +DG +
Sbjct: 67 SPSGISLIKSLARVSDVLIDPYRPGVLEKLGLGPSVLCSDECNPRLIYARLTGFRRDGRF 126
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ MAGHDINYL +SG+LS+LG + PTPP N+ DF GGG + GI++AL R ++G+
Sbjct: 127 AHMAGHDINYLAVSGVLSMLGRKGEKPTPPINILGDFAGGGAVLFQGILLALAARERTGK 186
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV++ N+V+G++YL S+ T + + PRGENLLD G +YDTYETKDG++MAVGAL
Sbjct: 187 GQVVEANIVDGASYLASFNRFALKTAVGNAPRGENLLDTGCPYYDTYETKDGKYMAVGAL 246
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG--------RAKLTEKFKEKTQAEWCEIFDNTDA 289
E QF+ +L+ GLG+ E+ E + G R + ++FK KT+ EW +IFD TDA
Sbjct: 247 EPQFFRELIKGLGL--EDGKAWEAKRGDKENWPELRRLMEQRFKTKTRREWEDIFDGTDA 304
Query: 290 CVTPVL 295
C T V
Sbjct: 305 CCTAVF 310
>gi|451339852|ref|ZP_21910361.1| Alpha-methylacyl-CoA racemase [Amycolatopsis azurea DSM 43854]
gi|449417416|gb|EMD23075.1| Alpha-methylacyl-CoA racemase [Amycolatopsis azurea DSM 43854]
Length = 382
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/374 (46%), Positives = 240/374 (64%), Gaps = 17/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP------FVQDTVGYGKKSLCI 56
L G+ V+E AGLAPAPF IL + GA V+RID+ A P F D + G++S+ I
Sbjct: 8 LSGLKVVELAGLAPAPFACTILADLGAEVVRIDR--ATPGNDVIGFPNDPLARGRRSIGI 65
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
N K +G+ ++ LA +DV++E FR GV E++ +GP+ + NPRL+Y R++GYGQDGP
Sbjct: 66 NTKTPEGVELVLKLAESADVLIEGFRPGVAERMGIGPEQVHARNPRLVYGRMTGYGQDGP 125
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+++AGHDINY+G+SG L +G + P P NL DFGGGGL+ A+G++ AL+ER+ SG
Sbjct: 126 LATVAGHDINYIGISGALEPIGHAGQRPVVPLNLVGDFGGGGLLLAMGVLAALYERTSSG 185
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +MV+G+A L + L D+ LW RGEN+LDGGA FYDTYET DG+++A+GA
Sbjct: 186 KGQVVDASMVDGAALLTTSLHGMLDSGLWPGGRGENMLDGGAPFYDTYETADGKYVAIGA 245
Query: 237 LESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F+ L+ LG+ EE+P H E R + E + T+ E + TDAC+T
Sbjct: 246 IEMRFWGDLVKVLGLDPEEIPVHVDMNEWPKLRKIVAEAVAKHTRDELVAKAEGTDACLT 305
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP-GVHTREV 351
PVL+ +A SHPHNV RG+F+ + G++ PAPAPR RTP T P P G T V
Sbjct: 306 PVLAPREAPSHPHNVARGTFV-DVGGMMQPAPAPRFDRTPAE---TPEPPRPKGADTVGV 361
Query: 352 LRHFGYSDANIEEL 365
L G IE L
Sbjct: 362 LEELGVDADGIERL 375
>gi|121718278|ref|XP_001276157.1| isopenicillin N-CoA epimerase, putative [Aspergillus clavatus NRRL
1]
gi|119404355|gb|EAW14731.1| isopenicillin N-CoA epimerase, putative [Aspergillus clavatus NRRL
1]
Length = 384
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/301 (51%), Positives = 211/301 (70%), Gaps = 8/301 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
+ L G+ V+E AGLAP PF G++L ++GATV+RID+ A D + K S+ ++L+
Sbjct: 7 LPLAGVRVVELAGLAPGPFAGLLLADYGATVLRIDRPNA--ISADQLTRRKTSITLDLRD 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSS 119
V+ ++ +++DV+++P+R GV+E+L L P VL K NPRLI AR++G+ +DG Y
Sbjct: 65 PASHRVLLSILSKADVLIDPYRPGVLERLGLSPSRVLLKHNPRLIVARMTGFRRDGKYKD 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINY+ +SG+LS+LG +N P P NL DF GGG MC LGI++AL R++SGRGQ
Sbjct: 125 MAGHDINYIAVSGVLSMLGRKNEPPYAPGNLLGDFAGGGAMCLLGILLALLARTRSGRGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALE 238
V++ NMV+G+AYL + T+ T +W +PRGEN+LDGG+ FYDTYETKD G++ AVGALE
Sbjct: 185 VVEANMVDGAAYLATMPRLTRQTPMWSEPRGENMLDGGSPFYDTYETKDRGKYFAVGALE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA L+ GLG +ELP E RA ++F+EKT+AEW IFD DAC TPV
Sbjct: 245 PQFYAALIKGLGFAPDELPAREDRANWPALRAAFEKRFREKTRAEWEAIFDGADACATPV 304
Query: 295 L 295
L
Sbjct: 305 L 305
>gi|398952611|ref|ZP_10674886.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
gi|398154921|gb|EJM43381.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
Length = 384
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/377 (44%), Positives = 231/377 (61%), Gaps = 19/377 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQ----DTVGYGKKSL 54
L GI V+EF + PAPF M+L + GA V+RID+ P ++ D G ++S+
Sbjct: 4 LSGIRVVEFEAIGPAPFGTMLLADMGADVVRIDRPQKASDLGPKLEGKRADITGRNRRSV 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK+ ++ L ++DV++E FR G ME+L LGPD+ + NPRL+YAR++G+GQ
Sbjct: 64 TLDLKRPDSVAAALELIERADVVIEGFRPGTMERLGLGPDIALERNPRLVYARMTGWGQT 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHD+NY+ LSG+LS +G P PP NL D+GGGG++ A+G++ AL +
Sbjct: 124 GPMADRAGHDLNYIALSGVLSSIGPAGGRPVPPLNLVGDYGGGGMLLAMGVLAALVNVQR 183
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
G GQV+D M EG+A LGS + W + RG NLLDGGA +YDTYET+DG++MA+
Sbjct: 184 GGAGQVVDAAMTEGAAQLGSVIWGLLAGGHWTEQRGSNLLDGGAPWYDTYETRDGQYMAI 243
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDAC 290
G +ES+FYAQ+L LG++ +LP G +L E F +T+ +W F+ +DAC
Sbjct: 244 GPIESRFYAQMLEILGLSNADLPNQHDRAGWPRLREVFTAAFLGRTREQWVAAFEGSDAC 303
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHT 348
V PVL L +A HPH V RGSFI GVV P PAPR TP + PAP G H
Sbjct: 304 VAPVLGLVEAARHPHGVARGSFI-EVDGVVQPVPAPRFLGTPS----AQPQPAPERGEHG 358
Query: 349 REVLRHFGYSDANIEEL 365
+ LR +G+ IE L
Sbjct: 359 GDALRDWGFDTPAIERL 375
>gi|386381913|ref|ZP_10067599.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
tsukubaensis NRRL18488]
gi|385670633|gb|EIF93690.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
tsukubaensis NRRL18488]
Length = 408
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 220/363 (60%), Gaps = 13/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ I+L
Sbjct: 28 LAGVRVVELAGIGPGPFAAMVLADLGADVVRVDRPGGAGLAIDPAYDLTNRNKRSVLIDL 87
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + +L ++DV++E +R GV E+L +GPD NPRL+Y R++G+GQDGP +
Sbjct: 88 KADGGAGAVLDLVERADVLIEGYRPGVAERLGVGPDACLARNPRLVYGRMTGWGQDGPLA 147
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL-FERSKSGR 177
AGHDI Y+ ++G L ++G P P NL D+ GG L +G++ AL R++ GR
Sbjct: 148 DRAGHDIGYIAVTGTLGMIGRAEEAPAVPANLVGDYAGGSLYLVIGVLAALQHARAEGGR 207
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + + W RG NLLDGG FY YET DG++MAVGAL
Sbjct: 208 GQVVDAAVVDGAAHLATMIHGMMAAGGWQDRRGANLLDGGCPFYGCYETADGQYMAVGAL 267
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E +FY + + LG+ ++ + E + RA + +FK++T+AEW E+F+ +DACV PV
Sbjct: 268 EQRFYNEFVRLLGLPDDAPARKEFDRWDELRAAVAARFKQRTRAEWTEVFEGSDACVAPV 327
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL +A +HP RG+F+ AG+ PAPAPR S TPG + PA PG T V R
Sbjct: 328 LSLREAPAHPQLAARGTFV-EHAGITQPAPAPRFSATPGAVR---SGPALPGADTESVAR 383
Query: 354 HFG 356
+G
Sbjct: 384 DWG 386
>gi|401886737|gb|EJT50760.1| hypothetical protein A1Q1_08108 [Trichosporon asahii var. asahii
CBS 2479]
Length = 390
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/353 (45%), Positives = 226/353 (64%), Gaps = 21/353 (5%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH---GAQPFVQDTVGYGKKSLCINL 58
AL G+ VLEFAGLAP GM+ ATV+R+D+ A +D + K+S+ ++L
Sbjct: 6 ALTGLKVLEFAGLAP----GMLSRR--ATVLRVDRASPAAAAVPTKDMLARHKQSVVVDL 59
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K+ G++++K LA ++DV+++PFR GV+EKL LGP L ++NP+LIYAR++G+ +DG YS
Sbjct: 60 KQPAGVALVKKLAERADVLIDPFRPGVLEKLGLGPKPLLEANPKLIYARMTGFRRDGKYS 119
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+MAGHDINYL +SG+LS+LG P PP N+ DF GGG + GI++AL R SG+G
Sbjct: 120 AMAGHDINYLAVSGVLSMLGRAGDKPHPPTNILGDFAGGGAVLFQGILLALLSRGVSGKG 179
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV++ NMV+G++YL S Q T L PRG N+LDGG FYDTYETKDG+++AVG+LE
Sbjct: 180 QVVEANMVDGASYLSSMPRMGQKTPLGAGPRGTNMLDGGCPFYDTYETKDGKYVAVGSLE 239
Query: 239 SQFYAQLLAGLGM----TEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+ +++ G G+ + + E +T R ++TE FK KT+AEW +IFD TDACVTPV
Sbjct: 240 PQFFREMIKGTGLDPSWAKRQQNLDEWDTLRQQMTEAFKSKTRAEWEKIFDGTDACVTPV 299
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH 347
L S+ P R +V P L+ TPG + PGV
Sbjct: 300 LEYSELEGKPEGDQR--------PIVTLRNTPLLAVTPGANGDPAKGQGPGVK 344
>gi|385676388|ref|ZP_10050316.1| alpha-methylacyl-CoA racemase [Amycolatopsis sp. ATCC 39116]
Length = 366
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/365 (45%), Positives = 220/365 (60%), Gaps = 16/365 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQ---PFVQDTVGYGKKSLCIN 57
L GI VLE AG+ P P M+L + GA V+R+++ G Q P +D V G++S+ +
Sbjct: 4 LAGIKVLELAGIGPGPHAAMVLADLGADVVRVERPSGGLQVLPPEARDHVLRGRRSIAAD 63
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G +++ L ++DV+LE FR GV E+L +GP+ NPRL+Y R++G+GQDGP
Sbjct: 64 LKTPEGKRLVEQLVEKADVLLEGFRPGVAERLGVGPEDCFARNPRLVYGRMTGWGQDGPM 123
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ L+G L + P P NL DFGGG + G++ AL ER+ SGR
Sbjct: 124 AKRAGHDINYISLTGALHAVRDTGGKPIPALNLVGDFGGGSMFLVTGVLAALVERASSGR 183
Query: 178 GQVIDCNMVEGSAYLGS--WLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GQV+D MV+G++ L W R Q W G NLLD G FYDTY DG ++AVG
Sbjct: 184 GQVVDAAMVDGASVLLQMVWALRAQGA--WADEPGTNLLDTGCPFYDTYRCADGGYIAVG 241
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACV 291
ALESQFYA+LL GLG+ E+LP +G KL E+F E +T+ EW +F TDACV
Sbjct: 242 ALESQFYAELLKGLGLDGEDLPAQGDRSGWPKLRERFTEVIASRTRDEWTAVFAGTDACV 301
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
TPVLS ++A + H RGS + + G APAPR SRTP S P PG T V
Sbjct: 302 TPVLSFAEAAENEHLSARGS-VRDINGATQAAPAPRFSRTP--SGEPSAPPTPGADTEAV 358
Query: 352 LRHFG 356
+R +G
Sbjct: 359 IRDWG 363
>gi|400602305|gb|EJP69907.1| CoA-transferase family III [Beauveria bassiana ARSEF 2860]
Length = 409
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/304 (49%), Positives = 211/304 (69%), Gaps = 9/304 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI VLEFAGLAP PF GM+L + GATV+R+++H P QD + K S+ ++LK A+
Sbjct: 7 LTGIKVLEFAGLAPGPFAGMMLADAGATVLRVNRHNDAP--QDMLARHKASIAVDLKDAR 64
Query: 63 GLSVMKNLANQS--DVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G++++ +L DV+++PFR GV+E+L LGP+ L + NPRL+YAR++GY +DG Y++M
Sbjct: 65 GIALLHSLVASGGVDVLIDPFRPGVLERLGLGPEPLLRLNPRLVYARITGYRRDGKYATM 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+G+SG LSLLG P PP N+ DF GGG GI++AL R+ +GRGQV
Sbjct: 125 AGHDINYIGVSGALSLLGAAGERPQPPVNILGDFAGGGATLFQGILLALLARATTGRGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
++ NMV+GS+YL ++ + T + DKPRG+N+LDGG +Y Y T+DG+++ VGALE
Sbjct: 185 VEANMVDGSSYLATFPRMARATPMGDKPRGQNVLDGGCPWYGCYATRDGKWVTVGALEPH 244
Query: 241 FYAQLLAGLGMT----EEELPQHEVETGRAKL-TEKFKEKTQAEWCEIFDNTDACVTPVL 295
F+AQL+ GLG+ EE+ E A+L TE FK KT++EW +FD TDACV PVL
Sbjct: 245 FFAQLIKGLGLEGRGWEEDRGDEERWPELARLFTEIFKSKTRSEWEAVFDGTDACVAPVL 304
Query: 296 SLSQ 299
+
Sbjct: 305 DYEE 308
>gi|242792599|ref|XP_002481987.1| isopenicillin N-CoA epimerase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218718575|gb|EED17995.1| isopenicillin N-CoA epimerase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 383
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 210/305 (68%), Gaps = 8/305 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINLKK 60
L G+ V+E AGLAP PF G++L ++GA+V+R+D+ + + D + K S+C++LK
Sbjct: 7 LHGVKVVELAGLAPGPFAGLLLADYGASVLRVDRPPNTSVAPAGDHLTRHKSSICMDLKD 66
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSS 119
A+ ++ ++ ++DV+++PFR GV+E+L L P +VL K NPRLI AR++G+ + G Y
Sbjct: 67 ARSRELLLSILLRADVLIDPFRPGVLERLGLSPTEVLLKHNPRLIIARMTGFRRAGKYKD 126
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINYL +SG+LS+LG P P NL DF GGG MC LGI++AL RS +G+GQ
Sbjct: 127 MAGHDINYLAVSGVLSMLGRSGEPPLAPGNLLGDFAGGGAMCFLGILLALISRSATGKGQ 186
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALE 238
V++ NMV+G+AYL + + T +W +PRG+NLLDGG +YDTYETKD G++ AVGALE
Sbjct: 187 VVEANMVDGAAYLATMPRLARKTPVWSEPRGQNLLDGGCPYYDTYETKDKGKYFAVGALE 246
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
FYA LL GLG + ++P E R T++FKEKT+AEW IFD TDAC TPV
Sbjct: 247 PHFYAALLKGLGFAKNDVPASEDRDNWPAIRQIFTKRFKEKTRAEWEAIFDGTDACATPV 306
Query: 295 LSLSQ 299
L S+
Sbjct: 307 LEQSE 311
>gi|383768769|ref|YP_005447832.1| alpha-methylacyl-CoA racemase [Bradyrhizobium sp. S23321]
gi|381356890|dbj|BAL73720.1| alpha-methylacyl-CoA racemase [Bradyrhizobium sp. S23321]
Length = 368
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 213/341 (62%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G V+EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LSGFRVVEFAGIGPGPFACMMLADMGADVVTLDRVGAKKSMKSVAGRGRKVIELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ+GP ++ AG
Sbjct: 77 AIAQVLDLLANADALVEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQEGPLANAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + P PP NL DFGGG L +G++ AL E KSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGTKE-APVPPLNLVGDFGGGALYLVVGVLAALLEAQKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S+ + W + R N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 AAMCDGAASLMSFFFDMKTLGRWTEGRNRNFLDGGAHFYGVYECACGHFVSIGSIEPQFY 255
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+T+ + L EK FK KT+ +WC+I + TD C PVL++S
Sbjct: 256 ALLREHTGLTDADFDAQMDPKAWPALKEKLKAVFKSKTREDWCKIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+AT HPH V R F+ R GV PAPAPR SRTP + + E
Sbjct: 316 EATEHPHMVARNVFV-ERHGVKQPAPAPRFSRTPSSVREPE 355
>gi|386287238|ref|ZP_10064413.1| CoA-transferase [gamma proteobacterium BDW918]
gi|385279770|gb|EIF43707.1| CoA-transferase [gamma proteobacterium BDW918]
Length = 383
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 236/384 (61%), Gaps = 18/384 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQPFVQDTVGYGKKSLCIN 57
L GI V+E AG+ PAP+ M+L + GA VIRID+ GA P D G++S+ ++
Sbjct: 5 LSGIRVIEMAGIGPAPYACMLLADLGAEVIRIDRASGGGMGANP--GDVTARGRQSIALD 62
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LKK + + V+ L + +DV++E FR GVMEKL LGP+V + NPRL+Y R++G+GQDGP
Sbjct: 63 LKKPEAVDVVLQLLDNADVLIECFRPGVMEKLGLGPEVCAQRNPRLVYGRMTGWGQDGPL 122
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ +A HD+NY+ ++G+L G N P P N+ D GGG + LGI+ AL ER +SGR
Sbjct: 123 AKIAAHDLNYIAITGLLDSFGNANEAPPVPLNVIGDLGGGSMFLLLGILSALLERHQSGR 182
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D + +G+ L S + + W+ R +NLLDGGA +Y Y KDGR ++VGA+
Sbjct: 183 GQVVDAAICDGAISLLSTIHGLKGIGFWENQREQNLLDGGAPYYRNYLCKDGRSVSVGAV 242
Query: 238 ESQFYAQLLAGL----GMTE--EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
E FYAQLL L G T+ ++ + RA + +F EKT+ EWC IF +DAC
Sbjct: 243 EPHFYAQLLDKLELDFGATDYLNQMNKAAWPERRAAMAARFLEKTREEWCVIFAGSDACF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP-APGVHTRE 350
PVL L +A ++PHN HR + + R GV+ APAPR SRTPG K H P A G +R
Sbjct: 303 APVLDLDEAETYPHNQHRQNLV-RRDGVLQSAPAPRFSRTPGELK---HGPIAEGQDSRA 358
Query: 351 VLRHFGYSDANIEELIREDVIEET 374
+L+ G+ + I EL+ +++
Sbjct: 359 LLQQLGFDTSTIAELLANGAVKQA 382
>gi|340914824|gb|EGS18165.1| hypothetical protein CTHT_0061800 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 402
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/308 (50%), Positives = 213/308 (69%), Gaps = 11/308 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ VLEFAGLAP PF G++L + GA+V+RID+ + D + K+SL +NL
Sbjct: 7 LTGLRVLEFAGLAPGPFAGLLLADAGASVLRIDRPLSPNSPPPPAADLLTRHKRSLALNL 66
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + ++ LA+++D++++PFR GV+EKL LGPDVL NPRLIYARL+G+ +DG ++
Sbjct: 67 KSPSAIKLIHQLASKADILIDPFRPGVLEKLGLGPDVLLAINPRLIYARLTGFRRDGRFA 126
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
MAGHDINYL +SG+LSLLG +N PTPP NL DF GGG M LGI++AL ER ++G+G
Sbjct: 127 HMAGHDINYLSISGVLSLLGRKNAPPTPPANLLGDFAGGGAMLVLGILLALLERERTGKG 186
Query: 179 QVIDCNMVEGSAYLGSW--LTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
QV++ NMV+G+ YL S+ L + T WD+PRGENLLD G +YDTY+TKDG +MAVGA
Sbjct: 187 QVVEANMVDGAGYLASFARLAKASGTPTWDRPRGENLLDSGCPYYDTYQTKDGGWMAVGA 246
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QF+++LL GLG++ + + + R E F+ KT+AEW +F+ TDAC
Sbjct: 247 LEPQFFSELLKGLGLSGQGWERMRYDRKHWPELRRVFEETFRSKTRAEWERVFEGTDACC 306
Query: 292 TPVLSLSQ 299
TPV +
Sbjct: 307 TPVYEYDE 314
>gi|421596590|ref|ZP_16040377.1| alpha-methylacyl-CoA racemase [Bradyrhizobium sp. CCGE-LA001]
gi|404271304|gb|EJZ35197.1| alpha-methylacyl-CoA racemase [Bradyrhizobium sp. CCGE-LA001]
Length = 369
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 213/341 (62%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LSGFRIVEFAGIGPGPFACMMLADMGADVVTLDRVGAKKSMKSVAGRGRKVIELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ+GP ++ AG
Sbjct: 77 AIAEVLDLLASADALVEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQEGPLANAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + P PP NL DFGGG L +G++ AL E KSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGPKE-APVPPLNLVGDFGGGALYLVVGVLAALLEAQKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S+ W + R +N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 AAMCDGAASLMSFFFDMTTLGRWTEGRNQNFLDGGAHFYGVYECACGHFVSIGSIEPQFY 255
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+T+ + L EK FK KT+ +WC+I + TD C PVL++S
Sbjct: 256 ALLREHAGLTDADFDAQMNPKAWPALKEKLKAVFKSKTREDWCKIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+AT HPH V R FI R GV PAPAPR SRTP ++ E
Sbjct: 316 EATQHPHMVARNVFI-ERHGVKQPAPAPRFSRTPSAAREPE 355
>gi|226361874|ref|YP_002779652.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
gi|226240359|dbj|BAH50707.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
Length = 396
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/380 (41%), Positives = 232/380 (61%), Gaps = 12/380 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG--AQPFVQDTVGYGKKSLCINLKK 60
L G+ VLE G+ P PF M+L++ GA V+R+D+ G +Q D + G++SL ++L++
Sbjct: 18 LTGLKVLELGGIGPGPFAAMLLSDMGADVVRVDRPGPDSQLGATDVLQRGRRSLVLDLRR 77
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ ++V+ +L Q+D+++E +R GV E+L +GP+ NPR++Y R++G+GQ GP++ M
Sbjct: 78 EESVAVLLDLVEQADIVIEGYRPGVAERLGVGPEDCLARNPRIVYGRMTGWGQSGPWAQM 137
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G L +G P P NL DFG G +G++ AL+E +SGRGQV
Sbjct: 138 AGHDINYVALTGALHAVGRAGEPPAVPVNLLGDFGAGSTYLVMGVLAALWESRQSGRGQV 197
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +V+G+A L + L W RG NLLD G +YD YET DG +M VGALES+
Sbjct: 198 VDAAIVDGAASLTTMLHGMLHAGSWKDERGVNLLDTGRPWYDVYETSDGGWMTVGALESK 257
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYAQ + L + + + E G R + ++F+ KT+AEW IF++TDACV PVL+
Sbjct: 258 FYAQFVELLEL-PAQFTRRPKEDGWPELRKHIADRFQSKTRAEWTAIFEHTDACVAPVLT 316
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L +A HP R +F+ + AGV PAPAPR RTP S + G HT EVL +G
Sbjct: 317 LGEAADHPQLRDRQTFV-DIAGVRQPAPAPRFDRTP--SAVQRPPARLGEHTLEVLTDWG 373
Query: 357 YSDANIEELIREDVIEETIE 376
+ A E LI + + T +
Sbjct: 374 LTSA--EALIADGIAGNTYQ 391
>gi|339328170|ref|YP_004687862.1| crotonobetainyl-CoA:carnitine CoA-transferase CaiB [Cupriavidus
necator N-1]
gi|338170771|gb|AEI81824.1| crotonobetainyl-CoA:carnitine CoA-transferase CaiB [Cupriavidus
necator N-1]
Length = 378
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 226/376 (60%), Gaps = 11/376 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG--AQPFVQDTV-GYGKKSLCINLK 59
L+G+ V+EFAG+ P PFCGM+L++ GA V+RID+ G A P + + G++S+ ++LK
Sbjct: 6 LQGLRVVEFAGIGPGPFCGMLLSDMGADVVRIDRKGSAAGPNAKYNIDARGRRSVALDLK 65
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + L + L ++D++ E +R GVME+L LGPDV+ N R++Y R++G+GQ GPY++
Sbjct: 66 RPESLELCLKLCERADIVFEGYRPGVMERLGLGPDVVLGRNRRIVYGRMTGWGQHGPYAN 125
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ ++G L +G P PP NL D+GGG + A G++ A+ +GRGQ
Sbjct: 126 RAGHDINYIAITGALDAIG-TGEKPIPPLNLVGDYGGGAMFLAFGLLAAVLNARSTGRGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M +G+AYL + R + LW R NLLDGGA FYDTY DG ++AVGA+E
Sbjct: 185 VVDVAMTDGAAYLTAVFHRLRAMGLWKDERCANLLDGGAPFYDTYRCADGTWIAVGAIEP 244
Query: 240 QFYAQLLAGLG----MTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFY LL G MT++++ + + + E F KT+ EWC + + DAC PVL
Sbjct: 245 QFYQILLEKTGLAGTMTDDQMDRSRWPDMKRQFAEVFATKTREEWCAVMGSDDACFAPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
S+ +A PH V R +F+ GV PAPAPR S TPG +I + ++ +L +
Sbjct: 305 SIEEAMQDPHQVARETFV-EIDGVPQPAPAPRFSVTPG--QIQAMSQRLDTDSQSILADW 361
Query: 356 GYSDANIEELIREDVI 371
G EL V+
Sbjct: 362 GIGSDYTAELAAAGVV 377
>gi|396491801|ref|XP_003843639.1| similar to alpha-methylacyl-CoA racemase [Leptosphaeria maculans
JN3]
gi|312220219|emb|CBY00160.1| similar to alpha-methylacyl-CoA racemase [Leptosphaeria maculans
JN3]
Length = 398
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/301 (50%), Positives = 203/301 (67%), Gaps = 7/301 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKA 61
L G+ VLEFAGLAP PF G++L ++GA+V+R+D+ P D + K S+ +N+K A
Sbjct: 9 LSGLRVLEFAGLAPGPFAGLLLADYGASVLRLDRATISPQPTADQLTRRKTSIRVNIKSA 68
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSSM 120
G+++++ LA ++DV+++PFR GV+EK L P VL + NPRLI AR++G+ +DG Y M
Sbjct: 69 AGVALVQRLAREADVLIDPFRPGVLEKAGLDPVTVLRRINPRLIVARMTGFRRDGKYKDM 128
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ +SG+LSL G + P P N+ DF GGG MC + I++AL R +SGRGQV
Sbjct: 129 AGHDINYIAVSGVLSLFGRQGERPYAPGNVVGDFAGGGAMCFIAILLALLARERSGRGQV 188
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
++ NMV+GSA L + T +W RG NLLDGGA FYDTYETKDG FMAVGA+E Q
Sbjct: 189 VEANMVDGSAMLATMPRLGGKTPVWSAERGTNLLDGGAPFYDTYETKDGNFMAVGAIEPQ 248
Query: 241 FYAQLLAGLGMTEEELP-----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA LL GL +T +LP + + + FK KT+AEW IFD TDAC TPVL
Sbjct: 249 FYAALLQGLSLTPSDLPGDRNNKSDWPALKTFFASVFKTKTRAEWEHIFDGTDACCTPVL 308
Query: 296 S 296
+
Sbjct: 309 T 309
>gi|358371579|dbj|GAA88186.1| isopenicillin N-CoA epimerase [Aspergillus kawachii IFO 4308]
Length = 379
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/299 (50%), Positives = 203/299 (67%), Gaps = 8/299 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E AGLAP PF G++L ++GA+V+RID+ A+ D + K S I+L+
Sbjct: 5 LDGLRVVELAGLAPGPFTGLLLADYGASVLRIDRPKAK--SADQLTRRKTSATIDLRDPD 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSMA 121
V+ ++ +DV+++P+R GV+E+L L P VL K NPRLI ARL+G+ +DG Y MA
Sbjct: 63 SHRVLLSVLKDADVLIDPYRPGVLERLGLSPSKVLLKHNPRLIVARLTGFRRDGKYKDMA 122
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ ++G+LS++G P PP NL DF GGG C LGI++AL R+ +GRGQV+
Sbjct: 123 GHDINYIAVAGVLSMIGRSGERPYPPLNLLGDFAGGGATCFLGILLALISRTHTGRGQVV 182
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQ 240
+ NMV+GSAYL + + T WD PRG+N LDGG+ FYDTYETKD G++ AVGALE Q
Sbjct: 183 EANMVDGSAYLAAMPRLGRQTPFWDAPRGQNTLDGGSPFYDTYETKDKGKYFAVGALEPQ 242
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY LL GL + EELP + + RA ++FK+KT+AEW +FD TDAC TPVL
Sbjct: 243 FYDALLKGLELNPEELPPRDNKDNWPALRAAFAKRFKDKTRAEWEAVFDGTDACATPVL 301
>gi|312197260|ref|YP_004017321.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
gi|311228596|gb|ADP81451.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
Length = 381
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 221/358 (61%), Gaps = 8/358 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQDTVGYGKKSLCINLKKA 61
L+GI VLE AG+ P P+ M+L + GA V+R+++ G A+ + + G++ ++LKKA
Sbjct: 9 LRGIRVLELAGIGPGPYAAMVLADLGADVLRVERPGQARDVAEPVILRGRRRTVLDLKKA 68
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
L ++DV++EP+R GV E+L +GPDV + NPRL+YAR++G+GQDGP++ A
Sbjct: 69 ADREAFLALCERADVLIEPYRPGVAERLGVGPDVCGQRNPRLVYARMTGWGQDGPWAQAA 128
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDI Y+ ++G L +G P PP NL DF GG L +G++ AL ER SG+G VI
Sbjct: 129 GHDITYIAVTGALHGIGRAGGPPQPPINLLGDFAGGSLFLVIGVLAALLERETSGQGDVI 188
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D +V+G+A+L +++ LW++ RG N LD G YD Y T D R+MAVGALE QF
Sbjct: 189 DAAIVDGTAHLTTYVLGQLARGLWNEKRGGNRLDTGQPNYDVYATADDRWMAVGALEPQF 248
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA+LL LG+ LP G RA L+ +F E+T+ EW F TDACV+PVL+
Sbjct: 249 YAELLRVLGIDAAALPAPNDPAGLAEVRAALSARFAERTRDEWTAAFAGTDACVSPVLTW 308
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
++A ++P RG+ + RAGV PAPAPR +R+P + + PA R VL +
Sbjct: 309 NEAPANPQLAARGTLV-ERAGVWQPAPAPRFTRSP--LDLPDAPPAAPEDARGVLSDW 363
>gi|46125591|ref|XP_387349.1| hypothetical protein FG07173.1 [Gibberella zeae PH-1]
Length = 400
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 210/310 (67%), Gaps = 9/310 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA---QPFVQDTVGYGKKSLCINLK 59
L GI VLEFAGLAP P+ GM+L + GA+V+RID+ + +P D + K S+ ++LK
Sbjct: 7 LTGINVLEFAGLAPGPYAGMLLADAGASVLRIDRASSDVSRP-TADVLARHKASISVDLK 65
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G++++K LA +DV+++PFR GV+EKL LGPDVLC N RLIY+R++G+ +DG Y+
Sbjct: 66 SERGIALIKRLAANADVLIDPFRPGVLEKLGLGPDVLCNLNKRLIYSRMTGFRRDGKYAL 125
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINYL +SG L +LG P PP N+ ADF GGG + GI+MA+ R SG GQ
Sbjct: 126 MAGHDINYLAVSGTLGMLGREGEKPHPPMNILADFAGGGAILFQGILMAVISRQSSGLGQ 185
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V++ NMV+GS++L ++ T + ++ RG+NLLDG A FYDTYET DG++MAVGALE
Sbjct: 186 VVEANMVDGSSHLTTFPRMGLKTPIGNRGRGKNLLDGAAPFYDTYETSDGKYMAVGALEP 245
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+A LL GLG+ + + + + R +T+ F+ K +AEW IFD TDAC TPV
Sbjct: 246 QFFAALLEGLGLVNQGWEKDQQDRTRWPELRKLMTDTFRNKNRAEWEAIFDGTDACCTPV 305
Query: 295 LSLSQATSHP 304
L + + P
Sbjct: 306 LEYGELETDP 315
>gi|444431349|ref|ZP_21226516.1| putative fatty acid-CoA racemase [Gordonia soli NBRC 108243]
gi|443887758|dbj|GAC68237.1| putative fatty acid-CoA racemase [Gordonia soli NBRC 108243]
Length = 379
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/372 (47%), Positives = 231/372 (62%), Gaps = 13/372 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH---GAQPFVQDTVGYGKKSLCINLK 59
L+G+ V+E A LAP PF MIL + GA VIR+D+ G + G+ S+ ++LK
Sbjct: 5 LEGLRVVEIASLAPGPFAAMILADLGAEVIRVDRADDAGGLLAPTGVLDRGRTSISVDLK 64
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
A+G V+ L +D+++E FR GV E+L +GPD N RLIY R++G+GQ GP +
Sbjct: 65 SAEGRDVVLRLVETADILIEGFRPGVAERLGIGPDECALRNERLIYGRITGWGQTGPLAH 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ LSG L +G P PP NL DFGGGGL+ +GI+ A+ ERS SG GQ
Sbjct: 125 RAGHDINYIALSGALHTIGRAGERPLPPVNLLGDFGGGGLLLVMGILAAVHERSVSGTGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +MVEG+A + ++L + +WD RGENLLD G FYDTYE DGRF+AVG +E
Sbjct: 185 VVDASMVEGAALITAFLHAMHASGVWDGERGENLLDTGGAFYDTYECSDGRFVAVGCVEP 244
Query: 240 QFYAQLLAGLGMTEE-ELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYAQ+L LG+ +E +LP Q++++ R +L E F + + EW E+F ++DACVTPV
Sbjct: 245 QFYAQMLEILGLADEPDLPFQYDLDNAEKLRERLAEVFSTRPRDEWTELFHHSDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAG-VVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
LS +A HPHN RGSF+ R G + PAPAPR SRTP PG T VL
Sbjct: 305 LSPWEAAEHPHNAMRGSFV--RVGDIEQPAPAPRFSRTPAADPTP--GSTPGADTESVLA 360
Query: 354 HFGYSDANIEEL 365
GY I L
Sbjct: 361 ALGYDKDAISSL 372
>gi|429769099|ref|ZP_19301222.1| III protein, CoA-transferase family [Brevundimonas diminuta 470-4]
gi|429187924|gb|EKY28821.1| III protein, CoA-transferase family [Brevundimonas diminuta 470-4]
Length = 352
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 215/344 (62%), Gaps = 15/344 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLC-INLKKA 61
L G+T++E AG+ PAPFCGM+L + GA V+ + + GA P ++D + + L +LK
Sbjct: 5 LDGLTIIEIAGIGPAPFCGMMLADHGAEVVLVHRPGAAPDLRDPLNRSRARLVEADLKTP 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G +++++LA +D ++E FR GVME+L LGPDVL NPRL+Y R++G+GQDGP +S
Sbjct: 65 EGAALIRDLARAADGLIEGFRPGVMERLGLGPDVLLADNPRLVYGRMTGWGQDGPLASAP 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDI+Y+ +SG L G PTPP N+ DFGGGG++ A G+V L + ++GRG VI
Sbjct: 125 GHDIDYIAVSGALHAFGRAGEKPTPPINMVGDFGGGGMLLAFGMVAGLLKAQRTGRGDVI 184
Query: 182 DCNMVEGSAYLGS--WLTRTQ------DTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
DC M +GS+ L S W R + W RG NLLD GA FY+ YETKDG+++A
Sbjct: 185 DCAMTDGSSLLMSMIWGFRQNMPAPLPPSLAWRDERGVNLLDTGAPFYEVYETKDGKYVA 244
Query: 234 VGALESQFYAQLLAGLGMTEE---ELPQHEVETGRA--KLTEKFKEKTQAEWCEIFDNTD 288
+GA+E FY LL G+ + +P + R KL F+ +T+ +WC D +
Sbjct: 245 IGAIEPAFYIALLRLTGLASDPDFAMPFDPAQWPRLKDKLAAVFRTRTRDDWCNDPDAQN 304
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
ACV PVLS+++A HPHN R +F+ GVV PAPAPR +P
Sbjct: 305 ACVAPVLSMTEAPDHPHNRARDAFV-TAQGVVQPAPAPRFRDSP 347
>gi|407984674|ref|ZP_11165283.1| coA-transferase III family protein [Mycobacterium hassiacum DSM
44199]
gi|407373735|gb|EKF22742.1| coA-transferase III family protein [Mycobacterium hassiacum DSM
44199]
Length = 363
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/363 (44%), Positives = 219/363 (60%), Gaps = 15/363 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L+G+ VLEFA + P P MIL + GA V+R+++ G + ++ ++S+ NL
Sbjct: 5 LQGLRVLEFASIGPGPHAAMILADLGADVVRVERPGKPGGIPTTKREATLRNRRSVAANL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +GL ++K L ++DV++E R GVME+L LGPD K N RLIY R++G+GQ GP +
Sbjct: 65 KTPEGLELVKKLVAKADVLIEGLRPGVMERLGLGPDDCFKLNERLIYGRMTGWGQTGPRA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G+L +G + P PP NLA DFGGG + +GI+ AL+ER SG+G
Sbjct: 125 HQAGHDINYISLNGVLHSIGRKGERPVPPLNLAGDFGGGSMFLLVGILAALYERQTSGKG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+GS+ L + LW RG NLLDGGA +YDTY DGR++AVG +E
Sbjct: 185 QVIDAAMVDGSSVLIQMIWSFLQDGLWTDERGVNLLDGGAPYYDTYTCADGRYIAVGCIE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+ L GLG+ +LP + RAK E K + W ++F+ TDACVTPV
Sbjct: 245 PQFYAEFLKGLGLENADLPDQNDRSRWPELRAKFAEVIASKDRDHWAKVFEGTDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGV-VAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVL 352
LS S+ + PH R +F R G + P PAPR SR+ PG K PG T VL
Sbjct: 305 LSFSEVETEPHITERNTFY--RDGEHLQPMPAPRFSRSVPGMPKPPGE---PGADTEAVL 359
Query: 353 RHF 355
+ +
Sbjct: 360 KDW 362
>gi|404253283|ref|ZP_10957251.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
sp. PAMC 26621]
Length = 372
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 223/371 (60%), Gaps = 12/371 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQDTVGYGKKSLCINLK 59
L G+ +LE AG+ P PFCGM+L + GA VIR+++ G +D + ++++ ++LK
Sbjct: 7 LAGLRILEMAGIGPGPFCGMMLADHGAEVIRVERPSRGGMTDPARDPLLRSRRTIVLDLK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + ++ ++ LA D ++E +R GVME+L LGPD+L NPRL+Y R++G+GQ GP +
Sbjct: 67 RPEAVAAVRRLAGTCDGLIEGYRPGVMERLGLGPDLLLADNPRLVYGRMTGWGQTGPLAD 126
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
GHDI+YL +SG L LG R P P NLAADFGGGG+M A G++ A+ +G GQ
Sbjct: 127 EPGHDIDYLAISGTLHALGEAGRKPNAPINLAADFGGGGMMLAFGMLAAILHAKATGEGQ 186
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M +GSA L S + + W RG NLLDGGA FYDTYET DG+++AVGA+E
Sbjct: 187 VVDAAMTDGSAVLASTIWGFRAMGQWRDERGTNLLDGGAPFYDTYETADGKWIAVGAIEP 246
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA L L + E V + +L + +F+++ + EW F +ACV PVL
Sbjct: 247 QFYAALRRVLALDGPEWDAQFVPSAWPRLKQALATRFRDRPRDEWVAAFAGHEACVAPVL 306
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+A +HPHNV RG+F+ VV PAPAPR S S+ A + +L
Sbjct: 307 GFDEAAAHPHNVARGTFV-TAGDVVQPAPAPRYS----ASETVSPRMAGASDSVGILTEA 361
Query: 356 GYSDANIEELI 366
G+++A I L+
Sbjct: 362 GFTEAEIAALL 372
>gi|451999826|gb|EMD92288.1| hypothetical protein COCHEDRAFT_1203289 [Cochliobolus
heterostrophus C5]
Length = 396
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/303 (49%), Positives = 204/303 (67%), Gaps = 7/303 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L I VLEFAGLAP PF GM+L ++GA+V+R+D+ P D + K S+C+NLK
Sbjct: 9 LSNIRVLEFAGLAPGPFAGMLLADYGASVLRLDRAPGTP-TTDQLTRRKTSICVNLKSPA 67
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSMA 121
GL+++K + Q D++++PFR GV+EK L P+ VL K N RLI AR++G+ +DG Y+ MA
Sbjct: 68 GLALIKKIIPQIDILIDPFRPGVLEKAGLDPEKVLLKLNKRLIIARMTGFRRDGKYAQMA 127
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ +SG+LS+ G + P PP N+ DF GGG MC +GI++AL R +SG GQV+
Sbjct: 128 GHDINYIAVSGVLSMFGRKGEKPYPPGNVVGDFAGGGAMCFVGILLALLARERSGFGQVV 187
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
+ NMV+GSA L + T +W RG N+LDGGA FYDTYETKDG +MAVGA+E QF
Sbjct: 188 EANMVDGSAILATMPRLGLKTEVWKHERGTNMLDGGAPFYDTYETKDGGYMAVGAIEPQF 247
Query: 242 YAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
YA LL G+ + +LP + T +FK+KT+AEW IFD TDAC TPVL+
Sbjct: 248 YAALLKGMELKASDLPGSRDNMADWPKLKDFFTAEFKKKTRAEWEAIFDGTDACCTPVLT 307
Query: 297 LSQ 299
++
Sbjct: 308 QAE 310
>gi|124266084|ref|YP_001020088.1| hypothetical protein Mpe_A0891 [Methylibium petroleiphilum PM1]
gi|124258859|gb|ABM93853.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 388
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/375 (41%), Positives = 224/375 (59%), Gaps = 17/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV------QDTVGYGKKSLCI 56
L+G+ V+EFA + PAPFCGM+L + GA V+RID+ G P +D + G+ ++ +
Sbjct: 11 LRGVRVVEFAAMGPAPFCGMLLADLGADVLRIDRPGGGPQAALFDPARDVLQRGRNAVAL 70
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+L +A G + L ++V++E FR GVME+L LGP+ NPRL+Y R++G+GQDGP
Sbjct: 71 DLAQADGRAAALRLVGTAEVLIEGFRPGVMERLGLGPEPCLAHNPRLVYGRMTGWGQDGP 130
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NYL LSG L +G P PP NL ADFGGG ++ A+G++ A+ ++G
Sbjct: 131 LAHTAGHDLNYLALSGALHAIGRSEGGPVPPLNLVADFGGGAMLLAVGVLAAVLHARQTG 190
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D M +G A L + Q W+ R NL+DG A FYDTY DG +MAV A
Sbjct: 191 EGQVVDAAMTDGCALLQAMNLTFQAMGQWEDRRQSNLIDGAAPFYDTYACADGGYMAVAA 250
Query: 237 LESQFYAQL-----LAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE +FY Q LAG+G+ + + + + +++E + +T+ +W +F+ +DACV
Sbjct: 251 LEERFYRQFLDRTGLAGVGLMQSQHDRTLWPLQKQRISEVLRTRTRDDWTRVFEGSDACV 310
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT-RE 350
TPVL+L +A HPH+ RGSF+ G V P PAPR SRTP + P H +
Sbjct: 311 TPVLTLGEAPRHPHHRARGSFV-TVDGQVQPGPAPRFSRTPTVGARS----LPATHDGGQ 365
Query: 351 VLRHFGYSDANIEEL 365
L +G+S +I L
Sbjct: 366 ALADWGWSREDIARL 380
>gi|441214256|ref|ZP_20976080.1| alpha-methylacyl-CoA racemase [Mycobacterium smegmatis MKD8]
gi|440625339|gb|ELQ87189.1| alpha-methylacyl-CoA racemase [Mycobacterium smegmatis MKD8]
Length = 363
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 223/362 (61%), Gaps = 13/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L+G+ V+E AG+ P P MIL + GA V+RI++ G V +D + ++S+ +L
Sbjct: 5 LQGLRVVELAGIGPGPHAAMILGDLGADVVRIERPGKGGGVPAGDRDAMLRNRRSVVADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ L ++DV++E +R GV E+L LGP+ K N RLIYAR++G+GQDGP +
Sbjct: 65 KAPEGRDLVLQLVAKADVLIEGYRPGVTERLGLGPEDCAKVNERLIYARMTGWGQDGPRA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G L +G + P PP NLA DFGGG + +GI+ AL+ER SG+G
Sbjct: 125 LQAGHDINYISLNGTLHAVGRKGERPVPPLNLAGDFGGGSMFLLVGILSALYERQASGKG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+GSA L + + +W RG N+LD GA +YDTYET DG+++AVGA+E
Sbjct: 185 QVIDAAMVDGSAVLMEMMWSFRANGMWSDERGTNMLDTGAPYYDTYETADGKYIAVGAIE 244
Query: 239 SQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+LL GLG+ +LP Q+++ R T+ F +A W ++F+ TDAC TPV
Sbjct: 245 PQFYAELLKGLGLDGADLPAQNDISRWPELREVFTKAFAAHDRAHWTKVFEGTDACTTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVLR 353
LS ++ PH R +F + G + P PAPR SRT PG + G T VLR
Sbjct: 305 LSFAEVLDEPHVAERNTFYDDE-GNLQPMPAPRFSRTQPGRPTPPQQR---GADTEAVLR 360
Query: 354 HF 355
+
Sbjct: 361 DW 362
>gi|89899797|ref|YP_522268.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodoferax
ferrireducens T118]
gi|89344534|gb|ABD68737.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodoferax
ferrireducens T118]
Length = 362
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 210/340 (61%), Gaps = 6/340 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ ++EFAG+ P PFC M+L + GA V+RI + GA D + + + ++L+ +
Sbjct: 5 LSGLRIVEFAGIGPGPFCAMVLADMGADVVRIARPGAAIDPNDVLARSRTVVNLDLRDPQ 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ + +L ++D ++E +R GVME+L LGPDV N RL+Y R++G+GQ GP + AG
Sbjct: 65 AVEQVFSLIERADALIEGYRPGVMERLGLGPDVCRARNLRLVYGRMTGWGQHGPLAQAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ +SG L +G +P PP N DFGGG ++ A+G++ AL E +SGRGQV+D
Sbjct: 125 HDINYIAISGALHAIGRSGESPVPPLNYVGDFGGGAMLLAVGLLSALLEAGRSGRGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A + + + + W RGENLLDGGA FYDTY DGRF+A+GA+E QFY
Sbjct: 185 AAMSDGAALMSAMIYGFKSAGQWSNQRGENLLDGGAFFYDTYACADGRFVAIGAIEPQFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A L G+ E+ + +++ + +L + F+ +T+ EWC + + +DAC PVL
Sbjct: 245 ALLREHCGIAEDPVFDDQMDRAAWPLLKLRLAQVFRSRTRDEWCALLEGSDACFAPVLDW 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKI 337
+A HPHN R +F+ GV+ PAPAPR RTP +
Sbjct: 305 DEAPRHPHNAARATFV-ELDGVLQPAPAPRFDRTPAAMPV 343
>gi|284031612|ref|YP_003381543.1| L-carnitine dehydratase/bile acid-inducible protein F [Kribbella
flavida DSM 17836]
gi|283810905|gb|ADB32744.1| L-carnitine dehydratase/bile acid-inducible protein F [Kribbella
flavida DSM 17836]
Length = 376
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/371 (44%), Positives = 229/371 (61%), Gaps = 14/371 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFVQDTVGYGKKSLCINL 58
L G+ V+E AGL PAPF M+L E GA V+R+++ G P + V G++S+ ++L
Sbjct: 4 LSGVKVVELAGLGPAPFGCMLLAELGADVLRVERPGGGLAMGPPELELVNRGRRSVALDL 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
KK + ++ + L ++DV++E FR GV E+L LGP+ N RL+Y R++G+GQDGP +
Sbjct: 64 KKPEAVAAVLQLVAKADVLVEGFRPGVAERLGLGPEHCHAVNRRLVYGRMTGWGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI+YL +SG L +G P P NL DF GG L +G++ AL E SG G
Sbjct: 124 QAAGHDIDYLAVSGALHAIGRAGGPPQVPANLLGDFAGGSLYLVVGVLAALVEARSSGEG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + L W + RG NLLD GA FYD YET DG+ ++VGA+E
Sbjct: 184 QVVDAAIVDGAAHLTTMLLGALAGGAWTQDRGTNLLDTGAPFYDVYETSDGKHVSVGAIE 243
Query: 239 SQFYAQL--LAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
QFY +L L G+ + P E R T+ F ++TQAEW +IFD +DACV PVL
Sbjct: 244 PQFYDELVRLLGVDAPDRTDPATWPEL-RELFTKTFAQRTQAEWIDIFDGSDACVAPVLP 302
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L A HPH RG+F+ ++ GV APAPR SRTP +++ E PG HTRE L +G
Sbjct: 303 L--AGEHPHLAARGTFV-DKDGVRQAAPAPRFSRTP--TELGEPPARPGQHTREALTEWG 357
Query: 357 YSDANIEELIR 367
AN++EL+R
Sbjct: 358 L--ANVDELLR 366
>gi|339325425|ref|YP_004685118.1| alpha-methylacyl-CoA racemase [Cupriavidus necator N-1]
gi|338165582|gb|AEI76637.1| alpha-methylacyl-CoA racemase [Cupriavidus necator N-1]
Length = 387
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 232/376 (61%), Gaps = 16/376 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---------DTVGYGKKS 53
L GI VLEF + P PF M+L + GA V+R+D+ A + D G G++S
Sbjct: 4 LSGIRVLEFEAIGPGPFGAMLLADMGADVLRVDRPAAPADLGPKSATGKRVDITGRGRRS 63
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+ ++LK+ + L ++DV++E FR G ME+L LGPD NPRL+YAR++G+GQ
Sbjct: 64 VTLDLKQPQAQRAALALVERADVVIEGFRPGTMERLGLGPDAALALNPRLVYARMTGWGQ 123
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP + AGHD+NY+ LSG+LS +G + P PP NL D+GGGG++ ALG+V AL
Sbjct: 124 TGPLADRAGHDLNYVALSGVLSGIGRAGQAPVPPLNLVGDYGGGGMLLALGVVAALLNVQ 183
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
+ G+GQV+D M EG+A LG+ + W + R N+LDGGA +YD Y T+DG++M+
Sbjct: 184 RGGKGQVVDAAMTEGAAQLGAVFWGLLASGNWREERQANVLDGGAPWYDNYRTRDGKYMS 243
Query: 234 VGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDA 289
+G +E +FYA+LL LG+ ++LP G L E+F+ +T+ EWC +F+ +DA
Sbjct: 244 IGPVEGRFYAELLDKLGLAGKDLPAQYDRNGWPVLREQFEAVFLTRTRDEWCAVFEGSDA 303
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
C+ PVL S+A +HPH+ RGSF+ AGVV PAPAPR TP S+I+ PA G H
Sbjct: 304 CIAPVLEFSEAPNHPHHRARGSFV-EVAGVVQPAPAPRFLGTP--SEISGPAPARGEHGA 360
Query: 350 EVLRHFGYSDANIEEL 365
LR +G+ + +L
Sbjct: 361 AALRDWGFDADGVAQL 376
>gi|374572126|ref|ZP_09645222.1| putative acyl-CoA transferase/carnitine dehydratase [Bradyrhizobium
sp. WSM471]
gi|374420447|gb|EHQ99979.1| putative acyl-CoA transferase/carnitine dehydratase [Bradyrhizobium
sp. WSM471]
Length = 369
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 212/341 (62%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA ++ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LAGFRIVEFAGIGPGPFACMMLADMGAEIVTLDRVGARKNMKSVAGRGRKVVELDLKDKT 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ GP ++ AG
Sbjct: 77 AIAEVLDLLANADALVEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQQGPLANAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + P PP NL DFGGG L +G++ AL E S+SG+GQV+D
Sbjct: 137 HDINYISITGALAAIGTKE-APVPPLNLVGDFGGGALYLVVGVLAALLEASRSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S+ W + R EN LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 AAMCDGAASLMSFFFDMATLGRWTEGRDENFLDGGAHFYGVYECACGHFVSIGSIEPQFY 255
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+T+ + L EK FK KT+ +WC+I + TD C PVL++S
Sbjct: 256 ALLREHAGLTDADFDAQMDRKAWPALKEKLKMVFKSKTREDWCKIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+AT HPH V R F+ R GV PAPAPR SRTP + E
Sbjct: 316 EATKHPHMVARNVFV-ERHGVKQPAPAPRFSRTPSAVREPE 355
>gi|386847449|ref|YP_006265462.1| alpha-methylacyl-CoA racemase [Actinoplanes sp. SE50/110]
gi|359834953|gb|AEV83394.1| alpha-methylacyl-CoA racemase [Actinoplanes sp. SE50/110]
Length = 355
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 218/335 (65%), Gaps = 6/335 (1%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKA 61
AL+G+ V+E AGLAP PF M+L + GA V+ +D+ G + + +++L ++LK
Sbjct: 3 ALRGVRVVELAGLAPGPFGCMVLADLGADVVLVDRPGGT-GLDGPLQRNRRTLTLDLKSP 61
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
GL+ + +L ++DV++E +R GV E+L GPD NPRL+YAR++G+GQDGP ++ A
Sbjct: 62 DGLAGLLDLVAKADVLVEGYRPGVAERLGFGPDRCAGLNPRLVYARMTGWGQDGPLAAAA 121
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDI+YL ++G L LG + P P NL ADF GGG++ A+G++ AL ER +SGRGQV+
Sbjct: 122 GHDIDYLAIAGALEPLGRSGQPPHAPVNLLADFAGGGMLLAVGVLAALLERERSGRGQVV 181
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+GSA L ++L D W RGENLLDGGA FYDTY T DG ++AVGA+E QF
Sbjct: 182 DAAMVDGSALLTTFLRGLIDAGQWPGGRGENLLDGGAPFYDTYRTADGGYLAVGAIEPQF 241
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
Y LL GLG+ + ELP G R L ++ +T+ EW +F DACV+PVL+
Sbjct: 242 YGALLGGLGLDDAELPGQFDRDGWPELRRILADRIGSRTRDEWAAVFARLDACVSPVLTP 301
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
++A HPHN R +F+ G V P+PAPR RTP
Sbjct: 302 AEAPDHPHNRARSAFV-EVGGQVQPSPAPRFGRTP 335
>gi|381395635|ref|ZP_09921331.1| alpha-methylacyl-CoA racemase [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379328715|dbj|GAB56464.1| alpha-methylacyl-CoA racemase [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 379
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 223/373 (59%), Gaps = 12/373 (3%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINLK 59
AL GI V+E +GL P PF GM+L + GA VI++++ H + +D GKKS+ +NLK
Sbjct: 3 ALDGIKVIEMSGLGPCPFAGMLLADMGAEVIKVERSTHRDPLYEKDISARGKKSVVLNLK 62
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
A+G V+ L +DV++E +R GV E+L GP N RLIY R++G+GQ GP +
Sbjct: 63 TAEGREVLMRLIQSADVLIEGYRPGVAERLGFGPTQCEAINDRLIYGRMTGWGQVGPLAG 122
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ +SG L +G +PT P N+ DF GG L GI+ ALFER++S GQ
Sbjct: 123 CAGHDLNYIAVSGALHAIGKSGESPTIPLNIVGDFAGGSLFLTNGILAALFERTRSNLGQ 182
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWD-KPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D MV+G A L D W+ RG NLLDGGA FYDT+ET D R +A+ ++E
Sbjct: 183 VVDAAMVDGVANLMWMYHSFSDVNQWNVSERGTNLLDGGAFFYDTFETFDCRHIALASIE 242
Query: 239 SQFYAQLL------AGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
QF+ +L+ L T + + + R L + FK+KTQ +WC I + TDAC
Sbjct: 243 PQFFKELIELAELDVTLFNTTSQYDRKQWPILRQALAKIFKQKTQQQWCAILEGTDACFA 302
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL+L +A HPHNV R +++ N G V PAPAPRLSRTP + +H GV T ++L
Sbjct: 303 PVLTLKEAPLHPHNVARETYL-NVEGQVQPAPAPRLSRTPSRVRHGKHE--AGVDTYDLL 359
Query: 353 RHFGYSDANIEEL 365
GYS I +L
Sbjct: 360 AKLGYSAEAIRQL 372
>gi|386399721|ref|ZP_10084499.1| putative acyl-CoA transferase/carnitine dehydratase [Bradyrhizobium
sp. WSM1253]
gi|385740347|gb|EIG60543.1| putative acyl-CoA transferase/carnitine dehydratase [Bradyrhizobium
sp. WSM1253]
Length = 370
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 212/341 (62%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA ++ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LAGFRIVEFAGIGPGPFACMMLADMGAEIVTLDRVGARKNMKSVAGRGRKVVELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ GP ++ AG
Sbjct: 77 AIAEVLDLLANADALVEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQQGPLANAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + P PP NL DFGGG L +G++ AL E S+SG+GQV+D
Sbjct: 137 HDINYISITGALAAIGTKE-APVPPLNLVGDFGGGALYLVVGVLAALLEGSRSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S+ W + R EN LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 AAMCDGAASLMSFFFDMTTLGRWTEGRNENFLDGGAHFYGVYECACGHFVSIGSIEPQFY 255
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+T+ + L EK FK KT+ +WC+I + TD C PVL++S
Sbjct: 256 ALLREHAGLTDADFDAQMDRKAWPALKEKLKTVFKSKTREDWCKIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+AT HPH V R F+ R GV PAPAPR SRTP + E
Sbjct: 316 EATEHPHMVARNVFV-ERHGVKQPAPAPRFSRTPSAVREPE 355
>gi|330824453|ref|YP_004387756.1| alpha-methylacyl-CoA racemase [Alicycliphilus denitrificans K601]
gi|329309825|gb|AEB84240.1| Alpha-methylacyl-CoA racemase [Alicycliphilus denitrificans K601]
Length = 390
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 212/342 (61%), Gaps = 11/342 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L G+ V+E AG+ P P CGM+L + GA V+ +++ A+P + GK+SL +
Sbjct: 8 LAGVRVVELAGIGPGPMCGMLLADMGAQVLLVERLEPANIGIARPRRFELPHRGKRSLAV 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+A G++++ +LA +DV++E FR G ME+L LGP +P L+Y R++GYGQDGP
Sbjct: 68 DLKQADGVALVSDLAAAADVLIEGFRPGTMERLGLGPQACMARHPGLVYGRMTGYGQDGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+AGHD+NYL LSG L LG + P P NL AD+ GG L A GI AL ER++SG
Sbjct: 128 LHELAGHDLNYLALSGALHALGPADGKPAAPLNLLADYAGGALNLAFGIACALVERNRSG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVID +MVEG+A L + + L PRG NLLDGGA Y TY DG ++A A
Sbjct: 188 LGQVIDASMVEGTAVLMTSMFGMYAAGLHAAPRGHNLLDGGAPHYATYACADGAYIAFAA 247
Query: 237 LESQFYAQLLAGLGMTEEELPQHE----VETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F A G+ E L + + + GRA L E F +T+ EWCE+ +++DACVT
Sbjct: 248 IEPKFRAVFAERTGLPPEALARLDDPSTWQEGRAMLAELFATRTRGEWCELLEDSDACVT 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGT 334
PVL +A HPHN RGSF+ + GV PAPAPR SRTPG
Sbjct: 308 PVLDRDEAPRHPHNAARGSFV-LQDGVTQPAPAPRFSRTPGA 348
>gi|15840584|ref|NP_335621.1| fatty acid-CoA racemase [Mycobacterium tuberculosis CDC1551]
gi|148822356|ref|YP_001287111.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis F11]
gi|253799815|ref|YP_003032816.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis KZN 1435]
gi|254364046|ref|ZP_04980092.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis str.
Haarlem]
gi|289744886|ref|ZP_06504264.1| fatty acid-CoA racemase [Mycobacterium tuberculosis 02_1987]
gi|289749680|ref|ZP_06509058.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis T92]
gi|294993327|ref|ZP_06799018.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis 210]
gi|297633684|ref|ZP_06951464.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis KZN
4207]
gi|297730671|ref|ZP_06959789.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis KZN
R506]
gi|313658001|ref|ZP_07814881.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis KZN
V2475]
gi|375297056|ref|YP_005101323.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis KZN
4207]
gi|385990583|ref|YP_005908881.1| fatty acid-CoA racemase [Mycobacterium tuberculosis CCDC5180]
gi|385994181|ref|YP_005912479.1| fatty acid-CoA racemase [Mycobacterium tuberculosis CCDC5079]
gi|392433264|ref|YP_006474308.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis KZN
605]
gi|424946888|ref|ZP_18362584.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis NCGM2209]
gi|449063205|ref|YP_007430288.1| fatty acid-CoA racemase [Mycobacterium bovis BCG str. Korea 1168P]
gi|13880764|gb|AAK45435.1| fatty acid-CoA racemase [Mycobacterium tuberculosis CDC1551]
gi|134149560|gb|EBA41605.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis str.
Haarlem]
gi|148720883|gb|ABR05508.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis F11]
gi|253321319|gb|ACT25922.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis KZN
1435]
gi|289685414|gb|EFD52902.1| fatty acid-CoA racemase [Mycobacterium tuberculosis 02_1987]
gi|289690267|gb|EFD57696.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis T92]
gi|328459562|gb|AEB04985.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis KZN
4207]
gi|339294135|gb|AEJ46246.1| fatty acid-CoA racemase [Mycobacterium tuberculosis CCDC5079]
gi|339297776|gb|AEJ49886.1| fatty acid-CoA racemase [Mycobacterium tuberculosis CCDC5180]
gi|358231403|dbj|GAA44895.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis NCGM2209]
gi|379027350|dbj|BAL65083.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|392054673|gb|AFM50232.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis KZN
605]
gi|449031713|gb|AGE67140.1| fatty acid-CoA racemase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 395
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 206/334 (61%), Gaps = 6/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
L G+ V+E AG+ P P MIL + GA V+RID+ +D + ++ + +LK
Sbjct: 40 LSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSD 99
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+GL + L ++DV++E +R GV E+L LGP+ K N RLIYAR++G+GQ GP S A
Sbjct: 100 QGLELALKLIAKADVLIEGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQA 159
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+GIL +G + P PP NL DFGGG + +GI+ AL+ER SG+GQV+
Sbjct: 160 GHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGSMFLLVGILAALWERQSSGKGQVV 219
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+GS+ L + + T +W RG N+LDGGA +YDTYE DGR++AVGA+E QF
Sbjct: 220 DAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIEPQF 279
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA +LAGLG+ ELP RA LTE F + W +F N+DACVTPVL+
Sbjct: 280 YAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFASHDRDHWGAVFANSDACVTPVLAF 339
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH + R +F G P PAPR SRT
Sbjct: 340 GEVHNEPHIIERNTFYEANGG-WQPMPAPRFSRT 372
>gi|70984928|ref|XP_747970.1| isopenicillin N-CoA epimerase [Aspergillus fumigatus Af293]
gi|66845598|gb|EAL85932.1| isopenicillin N-CoA epimerase, putative [Aspergillus fumigatus
Af293]
gi|159126105|gb|EDP51221.1| isopenicillin N-CoA epimerase, putative [Aspergillus fumigatus
A1163]
Length = 382
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 214/329 (65%), Gaps = 8/329 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
+ L G+ V+E AGLAP PF G++L ++GA+V+R+D+ + D + K S+ ++L+
Sbjct: 6 LPLAGVRVVELAGLAPGPFAGLLLADYGASVLRVDR--PKSISTDQLTRRKTSITLDLRD 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSS 119
++ ++ ++DV+++P+R GV+E+L L P DVL K NPRLI AR++G+ +DG Y
Sbjct: 64 KTSHRLLLSILTKADVLIDPYRPGVLERLGLSPSDVLLKHNPRLIVARMTGFRRDGKYKD 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINY+ +SG+LS+LG + P P N+ DF GGG MC LGI++AL R+ +GRGQ
Sbjct: 124 MAGHDINYIAVSGVLSMLGRKGEPPYAPGNILGDFAGGGAMCFLGILLALLARAHTGRGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALE 238
V++ NMV+GSAYL + + T LW+ PRGEN+LDGG+ FY TYE KD G++ AVGALE
Sbjct: 184 VVEANMVDGSAYLATMPRLNRQTPLWNLPRGENMLDGGSPFYGTYECKDRGKYFAVGALE 243
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA L+ GLG +LP E RA +FKEKT+AEW IFD TDAC TPV
Sbjct: 244 PQFYAALIKGLGFETGDLPAREDRANWPALRAAFERRFKEKTRAEWEAIFDGTDACATPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPA 323
L ++ + + + G+ PA
Sbjct: 304 LEQAELEQSGYEQRPAVHLVDTPGLPIPA 332
>gi|390567855|ref|ZP_10248169.1| alpha-methylacyl-CoA racemase [Burkholderia terrae BS001]
gi|389940166|gb|EIN01981.1| alpha-methylacyl-CoA racemase [Burkholderia terrae BS001]
Length = 389
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 229/375 (61%), Gaps = 15/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ--------DTVGYGKKSL 54
L GI+VLEF + P PF M+L + GA V+RID+ A + D G G++S+
Sbjct: 4 LNGISVLEFEAIGPGPFGAMLLADMGADVLRIDRPAAPDDLGPKTNGKRIDITGRGRRSV 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK+ + +L ++DV++E +R G ME+L LGP NPRL+Y R++G+GQ
Sbjct: 64 TLDLKQPSSAAAALDLMARADVVIEGYRPGTMERLGLGPGEALARNPRLVYGRMTGWGQT 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP ++ AGHD+NY+ LSG+LS +G + P P NL D+GGGG++ ALG+V AL +
Sbjct: 124 GPLAARAGHDLNYIALSGVLSGIGPADGAPVVPLNLVGDYGGGGMLLALGVVSALLNVQR 183
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
G GQV+D M EG+A LG+ + + W + R NLLDGG +YD+Y T+DG +MAV
Sbjct: 184 GGSGQVVDAAMTEGAAQLGAVIWGLLASGNWREQRASNLLDGGTPWYDSYRTRDGHYMAV 243
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDAC 290
GA+E++FYAQLL LG+ + LP+ +G L E F +T+ EWC FD +DAC
Sbjct: 244 GAVEARFYAQLLDKLGLADAGLPKQHDRSGWPVLREAFAVAFASRTRDEWCAAFDGSDAC 303
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
V PVL S+A HP + RGSF+ AGVV PAPAPR S TP S+I P G
Sbjct: 304 VAPVLGFSEAPDHPQHRARGSFV-EVAGVVQPAPAPRFSTTP--SRIDGPAPQRGQGGLR 360
Query: 351 VLRHFGYSDANIEEL 365
LR +G+ DA IE +
Sbjct: 361 ALRDWGFDDAAIERM 375
>gi|261202408|ref|XP_002628418.1| alpha-methylacyl-CoA racemase [Ajellomyces dermatitidis SLH14081]
gi|239590515|gb|EEQ73096.1| alpha-methylacyl-CoA racemase [Ajellomyces dermatitidis SLH14081]
gi|239612242|gb|EEQ89229.1| alpha-methylacyl-CoA racemase [Ajellomyces dermatitidis ER-3]
Length = 398
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/315 (48%), Positives = 209/315 (66%), Gaps = 22/315 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQPFV-----QDTVGYGKK 52
LKGI VLE AGLAPAPF G++L ++GA+V+R+D+ H + P V D++ K
Sbjct: 9 LKGIRVLELAGLAPAPFAGLLLADYGASVLRVDRPHPQAHSSSPDVFPPETSDSLTRHKT 68
Query: 53 SLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGY 111
S+ ++LK L+V+ +L + +D++++PFR GV+E+L L P +VL K NPRLI AR++G+
Sbjct: 69 SISLDLKSPASLAVLLSLISNADILIDPFRPGVLERLGLSPTNVLLKKNPRLIVARMTGF 128
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
+DG Y MAGHDINY+ +SG+L LLG P P N+ DF GGG MC LGI++AL
Sbjct: 129 RRDGKYKDMAGHDINYIAVSGVLGLLGRAGERPYAPGNIVGDFAGGGAMCFLGILLALLA 188
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GR 230
R ++G+GQV++ NMV+GSAYL ++ Q +W PRG N+LDGG +YDTYETKD G+
Sbjct: 189 RERTGKGQVVEANMVDGSAYLATFPRLLQKRLVWGAPRGHNVLDGGCPYYDTYETKDAGK 248
Query: 231 FMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAK----------LTEKFKEKTQAEW 280
+ AVGALE QF+A LL GLG+ ++ + R T +FKEKT+ EW
Sbjct: 249 YFAVGALEPQFFAALLKGLGLKMADIMPPDSSGMREDPSTWAYMREVFTRRFKEKTRKEW 308
Query: 281 CEIFDNTDACVTPVL 295
+IFD TDAC TPVL
Sbjct: 309 EDIFDGTDACATPVL 323
>gi|340626158|ref|YP_004744610.1| putative alpha-methylacyl-CoA racemase MCR [Mycobacterium canettii
CIPT 140010059]
gi|433626237|ref|YP_007259866.1| Putative alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium canettii CIPT 140060008]
gi|433634200|ref|YP_007267827.1| Putative alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium canettii CIPT 140070017]
gi|433641290|ref|YP_007287049.1| Putative alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium canettii CIPT 140070008]
gi|340004348|emb|CCC43491.1| putative alpha-methylacyl-CoA racemase MCR (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase) [Mycobacterium
canettii CIPT 140010059]
gi|432153843|emb|CCK51068.1| Putative alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium canettii CIPT 140060008]
gi|432157838|emb|CCK55120.1| Putative alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium canettii CIPT 140070008]
gi|432165793|emb|CCK63275.1| Putative alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium canettii CIPT 140070017]
Length = 360
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 206/334 (61%), Gaps = 6/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
L G+ V+E AG+ P P MIL + GA V+RID+ +D + ++ + +LK
Sbjct: 5 LSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSD 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+GL + L ++DV++E +R GV E+L LGP+ K N RLIYAR++G+GQ GP S A
Sbjct: 65 QGLELALKLIAKADVLIEGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQA 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+GIL +G + P PP NL DFGGG + +GI+ AL+ER SG+GQV+
Sbjct: 125 GHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGSMFLLVGILAALWERQSSGKGQVV 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+GS+ L + + T +W RG N+LDGGA +YDTYE DGR++AVGA+E QF
Sbjct: 185 DAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA +LAGLG+ ELP RA LTE F + W +F N+DACVTPVL+
Sbjct: 245 YAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFARHDRDHWGAVFANSDACVTPVLAF 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH + R +F G P PAPR SRT
Sbjct: 305 GEVHNEPHIIERNTFYEANGG-WQPMPAPRFSRT 337
>gi|449297795|gb|EMC93812.1| hypothetical protein BAUCODRAFT_36268 [Baudoinia compniacensis UAMH
10762]
Length = 406
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 143/307 (46%), Positives = 208/307 (67%), Gaps = 13/307 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDTVGYGKKSLC 55
L+G+ VLEFAGLAP PF G++L ++GATV+R+D+ Q P D + K S+C
Sbjct: 7 LQGVRVLEFAGLAPGPFAGLLLADYGATVLRVDRAHPQAHTSNPPPPTSDQLTRRKASIC 66
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQD 114
+N K G++++K+L DV+++PFR GV+EK+ L P+ VL + NPR+I AR++G+ +D
Sbjct: 67 VNTKSPSGIALIKSLIPHVDVVIDPFRPGVLEKMGLDPEGVLLQLNPRIIVARMTGFRRD 126
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
G Y MAGHDINY+ +SG+LS+LG ++ P PP N+ DF GGG +C +G+++AL +R +
Sbjct: 127 GKYKDMAGHDINYIAVSGVLSMLGRQHEKPYPPGNVVGDFAGGGAVCFMGVLLALLQRER 186
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
+G GQV++ NMV+GSA++ S T W RG N+LDGG +YDTY+TKDG++MAV
Sbjct: 187 TGLGQVVEANMVDGSAFMASMPRFGTKTPFWSGQRGTNILDGGCPYYDTYKTKDGKYMAV 246
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDA 289
GALE QF+ +L GL + ++L ++ R T +F EKT+AEW +FD TDA
Sbjct: 247 GALEPQFFTAMLKGLSIDPKDLGGDRTDSSTWQKQRELYTVRFNEKTRAEWESVFDGTDA 306
Query: 290 CVTPVLS 296
C TPVL+
Sbjct: 307 CCTPVLT 313
>gi|15608283|ref|NP_215659.1| Probable alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium tuberculosis H37Rv]
gi|31792338|ref|NP_854831.1| alpha-methylacyl-CoA racemase [Mycobacterium bovis AF2122/97]
gi|121637076|ref|YP_977299.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148660930|ref|YP_001282453.1| alpha-methylacyl-CoA racemase Mcr [Mycobacterium tuberculosis
H37Ra]
gi|167969284|ref|ZP_02551561.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
H37Ra]
gi|224989549|ref|YP_002644236.1| alpha-methylacyl-CoA racemase [Mycobacterium bovis BCG str. Tokyo
172]
gi|254231415|ref|ZP_04924742.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis C]
gi|254550142|ref|ZP_05140589.1| putative alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289442574|ref|ZP_06432318.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis T46]
gi|289446732|ref|ZP_06436476.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
CPHL_A]
gi|289569141|ref|ZP_06449368.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis T17]
gi|289573799|ref|ZP_06454026.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis K85]
gi|289753210|ref|ZP_06512588.1| fatty acid-CoA racemase [Mycobacterium tuberculosis EAS054]
gi|289757237|ref|ZP_06516615.1| fatty acid-CoA racemase [Mycobacterium tuberculosis T85]
gi|289761285|ref|ZP_06520663.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis GM
1503]
gi|298524641|ref|ZP_07012050.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308231750|ref|ZP_07413636.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu001]
gi|308370049|ref|ZP_07420123.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu002]
gi|308370631|ref|ZP_07422178.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu003]
gi|308371880|ref|ZP_07426540.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu004]
gi|308373050|ref|ZP_07430849.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu005]
gi|308374228|ref|ZP_07435254.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu006]
gi|308375377|ref|ZP_07443680.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu007]
gi|308376640|ref|ZP_07439498.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu008]
gi|308377640|ref|ZP_07479875.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu009]
gi|308378851|ref|ZP_07484062.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu010]
gi|308379987|ref|ZP_07488299.2| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu011]
gi|339631208|ref|YP_004722850.1| alpha-methylacyl-CoA racemase [Mycobacterium africanum GM041182]
gi|378770910|ref|YP_005170643.1| putative alpha-methylacyl-CoA racemase [Mycobacterium bovis BCG
str. Mexico]
gi|385997928|ref|YP_005916226.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis CTRI-2]
gi|386004143|ref|YP_005922422.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis RGTB423]
gi|392385847|ref|YP_005307476.1| mcr [Mycobacterium tuberculosis UT205]
gi|397672980|ref|YP_006514515.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis H37Rv]
gi|422812123|ref|ZP_16860511.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
CDC1551A]
gi|424803490|ref|ZP_18228921.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
W-148]
gi|60593962|pdb|1X74|A Chain A, Alpha-Methylacyl-Coa Racemase From Mycobacterium
Tuberculosis- Mutational And Structural Characterization
Of The Fold And Active Site
gi|60593963|pdb|1X74|B Chain B, Alpha-Methylacyl-Coa Racemase From Mycobacterium
Tuberculosis- Mutational And Structural Characterization
Of The Fold And Active Site
gi|60593964|pdb|1X74|C Chain C, Alpha-Methylacyl-Coa Racemase From Mycobacterium
Tuberculosis- Mutational And Structural Characterization
Of The Fold And Active Site
gi|60593965|pdb|1X74|D Chain D, Alpha-Methylacyl-Coa Racemase From Mycobacterium
Tuberculosis- Mutational And Structural Characterization
Of The Fold And Active Site
gi|134104380|pdb|2GCE|A Chain A, The 1,1-Proton Transfer Reaction Mechanism By Alpha-
Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A SMOOTH,
METHIONINE- Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104381|pdb|2GCE|B Chain B, The 1,1-Proton Transfer Reaction Mechanism By Alpha-
Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A SMOOTH,
METHIONINE- Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104382|pdb|2GCE|C Chain C, The 1,1-Proton Transfer Reaction Mechanism By Alpha-
Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A SMOOTH,
METHIONINE- Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104383|pdb|2GCE|D Chain D, The 1,1-Proton Transfer Reaction Mechanism By Alpha-
Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A SMOOTH,
METHIONINE- Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104384|pdb|2GCI|A Chain A, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AsparteHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104385|pdb|2GCI|B Chain B, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AsparteHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104386|pdb|2GCI|C Chain C, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AsparteHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104387|pdb|2GCI|D Chain D, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AsparteHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104388|pdb|2GD0|A Chain A, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104389|pdb|2GD0|B Chain B, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104390|pdb|2GD0|C Chain C, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104391|pdb|2GD0|D Chain D, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104392|pdb|2GD2|A Chain A, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104393|pdb|2GD2|B Chain B, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104394|pdb|2GD2|C Chain C, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104395|pdb|2GD2|D Chain D, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104396|pdb|2GD6|A Chain A, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104397|pdb|2GD6|B Chain B, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104398|pdb|2GD6|C Chain C, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|134104399|pdb|2GD6|D Chain D, The 1,1-Proton Transfer Reaction Mechanism By
Alpha-Methylacyl-Coa Racemase Is Catalyzed By An
AspartateHISTIDINE PAIR AND INVOLVES A Smooth,
Methionine-Rich Surface For Binding The Fatty Acyl
Moiety
gi|381352878|pdb|2YIM|A Chain A, The Enolisation Chemistry Of A Thioester-Dependent
Racemase: The 1.4 A Crystal Structure Of A Complex With
A Planar Reaction Intermediate Analogue
gi|381352879|pdb|2YIM|B Chain B, The Enolisation Chemistry Of A Thioester-Dependent
Racemase: The 1.4 A Crystal Structure Of A Complex With
A Planar Reaction Intermediate Analogue
gi|381352880|pdb|2YIM|C Chain C, The Enolisation Chemistry Of A Thioester-Dependent
Racemase: The 1.4 A Crystal Structure Of A Complex With
A Planar Reaction Intermediate Analogue
gi|381352881|pdb|2YIM|D Chain D, The Enolisation Chemistry Of A Thioester-Dependent
Racemase: The 1.4 A Crystal Structure Of A Complex With
A Planar Reaction Intermediate Analogue
gi|31617926|emb|CAD94036.1| PROBABLE ALPHA-METHYLACYL-COA RACEMASE MCR (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium bovis AF2122/97]
gi|121492723|emb|CAL71192.1| Probable alpha-methylacyl-CoA racemase mcr [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124600474|gb|EAY59484.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis C]
gi|148505082|gb|ABQ72891.1| putative alpha-methylacyl-CoA racemase Mcr [Mycobacterium
tuberculosis H37Ra]
gi|224772662|dbj|BAH25468.1| putative alpha-methylacyl-CoA racemase [Mycobacterium bovis BCG
str. Tokyo 172]
gi|289415493|gb|EFD12733.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis T46]
gi|289419690|gb|EFD16891.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
CPHL_A]
gi|289538230|gb|EFD42808.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis K85]
gi|289542895|gb|EFD46543.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis T17]
gi|289693797|gb|EFD61226.1| fatty acid-CoA racemase [Mycobacterium tuberculosis EAS054]
gi|289708791|gb|EFD72807.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis GM
1503]
gi|289712801|gb|EFD76813.1| fatty acid-CoA racemase [Mycobacterium tuberculosis T85]
gi|298494435|gb|EFI29729.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308216228|gb|EFO75627.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu001]
gi|308325430|gb|EFP14281.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu002]
gi|308331417|gb|EFP20268.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu003]
gi|308335227|gb|EFP24078.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu004]
gi|308339035|gb|EFP27886.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu005]
gi|308342703|gb|EFP31554.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu006]
gi|308346589|gb|EFP35440.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu007]
gi|308350512|gb|EFP39363.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu008]
gi|308355160|gb|EFP44011.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu009]
gi|308359115|gb|EFP47966.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu010]
gi|308363034|gb|EFP51885.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
SUMu011]
gi|323720424|gb|EGB29518.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
CDC1551A]
gi|326902766|gb|EGE49699.1| alpha-methylacyl-CoA racemase mcr [Mycobacterium tuberculosis
W-148]
gi|339330564|emb|CCC26232.1| putative alpha-methylacyl-CoA racemase MCR (2-methylacyl-CoA
racemase) [Mycobacterium africanum GM041182]
gi|341601092|emb|CCC63764.1| probable alpha-methylacyl-CoA racemase mcr [Mycobacterium bovis BCG
str. Moreau RDJ]
gi|344218974|gb|AEM99604.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis CTRI-2]
gi|356593231|gb|AET18460.1| Putative alpha-methylacyl-CoA racemase [Mycobacterium bovis BCG
str. Mexico]
gi|378544398|emb|CCE36672.1| mcr [Mycobacterium tuberculosis UT205]
gi|380724631|gb|AFE12426.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis RGTB423]
gi|395137885|gb|AFN49044.1| alpha-methylacyl-CoA racemase [Mycobacterium tuberculosis H37Rv]
gi|440580618|emb|CCG11021.1| putative ALPHA-METHYLACYL-CoA RACEMASE MCR (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium tuberculosis 7199-99]
gi|444894643|emb|CCP43898.1| Probable alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium tuberculosis H37Rv]
Length = 360
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 206/334 (61%), Gaps = 6/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
L G+ V+E AG+ P P MIL + GA V+RID+ +D + ++ + +LK
Sbjct: 5 LSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSD 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+GL + L ++DV++E +R GV E+L LGP+ K N RLIYAR++G+GQ GP S A
Sbjct: 65 QGLELALKLIAKADVLIEGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQA 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+GIL +G + P PP NL DFGGG + +GI+ AL+ER SG+GQV+
Sbjct: 125 GHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGSMFLLVGILAALWERQSSGKGQVV 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+GS+ L + + T +W RG N+LDGGA +YDTYE DGR++AVGA+E QF
Sbjct: 185 DAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA +LAGLG+ ELP RA LTE F + W +F N+DACVTPVL+
Sbjct: 245 YAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFASHDRDHWGAVFANSDACVTPVLAF 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH + R +F G P PAPR SRT
Sbjct: 305 GEVHNEPHIIERNTFYEANGG-WQPMPAPRFSRT 337
>gi|158314766|ref|YP_001507274.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
gi|158110171|gb|ABW12368.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
Length = 387
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 230/375 (61%), Gaps = 9/375 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ VLE AGL P PF M+L + GA VIR+++ G PFV +D V G++++ I+ +
Sbjct: 15 LAGLRVLEMAGLGPVPFAAMMLADLGADVIRVERPGGDPFVGSRKDIVTRGRRNVIIDGR 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G ++ L DV+LE +R GVMEKL LGP+ NPRL+Y R++G+GQ+GP +
Sbjct: 75 DPAGRDLVLALIASRDVLLEGYRPGVMEKLGLGPEECEAVNPRLVYGRMTGWGQNGPLAH 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDI Y+ +G L G P+PP NL D+GGG ++ +G++ ALFE S SGRGQ
Sbjct: 135 TAGHDITYIARTGALWATGRAGEAPSPPLNLVGDYGGGAMLLLVGVLGALFESSTSGRGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G+A L + + + W RG NLLDGGA FYD Y KDG +A+GA+E
Sbjct: 195 VVDAAMVDGTALLTTLIWSMRAAGTWRDARGSNLLDGGAPFYDVYTCKDGGHIAIGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
QFYA+L+ G E Q +V + +A + F +T+AEW + ++ DAC PVLS
Sbjct: 255 QFYAELVRRTGYDAEGRGQWDVHSWPQQKAAWADLFARRTRAEWTALLEDGDACAAPVLS 314
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+A H RG+F+ + G++ PAPAPR R+ GTS +T PAPG HT +VL G
Sbjct: 315 WHEAPEDEHLWARGTFV-HVDGMIQPAPAPRFGRS-GTSPVTA-PPAPGEHTDQVLVELG 371
Query: 357 YSDANIEELIREDVI 371
+S ++++L R V+
Sbjct: 372 FSPEHVDDLRRSGVV 386
>gi|407276391|ref|ZP_11104861.1| fatty acid-CoA racemase [Rhodococcus sp. P14]
Length = 396
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 234/376 (62%), Gaps = 15/376 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-GA------QPFVQDTVGYGKKSLC 55
L G+ V+E + P PFC M+L + GA V+R+D+ GA F + + G++SL
Sbjct: 14 LSGLKVVEIGSIGPGPFCAMLLADLGADVVRVDRATGAGLVGPNAEFRTELLHRGRRSLA 73
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G V+ +L +DV++E FR GV E+L +GPD + NPRLIY R++G+GQDG
Sbjct: 74 VDLKHPDGAEVVLSLVADADVLIEGFRPGVTERLGIGPDDCAQRNPRLIYGRMTGFGQDG 133
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + GHDINY+ LSG+LSL+G PTPP +L DFGGGG++ A+G++ AL+ER +S
Sbjct: 134 PLAQHVGHDINYVALSGVLSLIGRHGHPPTPPLSLIGDFGGGGMLLAMGVLSALYERQRS 193
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQVID +MVEG+A L + + W++ RG NL+D GA FYD YET DG++++VG
Sbjct: 194 GTGQVIDASMVEGAALLATPFFGFTQSGSWNRERGTNLVDSGAPFYDAYETADGKWLSVG 253
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQ----AEWCEIFDNTDACV 291
ALE FYA L+A LG+ ++LP ++ + F + + AEW + + C+
Sbjct: 254 ALEPHFYADLVALLGL-PDDLPDQNDRAQWPQMKKVFGDAVRGRALAEWLDAAEGHTPCI 312
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVL + +A SHPH+V RG+F+ G+V PAPAPR SRT + + P PG HT E+
Sbjct: 313 APVLDVDEAPSHPHHVARGTFV-EVDGLVQPAPAPRFSRT--AAAVDRRPPTPGEHTTEI 369
Query: 352 LRHFGYSDANIEELIR 367
L +G ++ +R
Sbjct: 370 LTDWGIDPDRTDQWLR 385
>gi|336472300|gb|EGO60460.1| hypothetical protein NEUTE1DRAFT_119631 [Neurospora tetrasperma
FGSC 2508]
gi|350294482|gb|EGZ75567.1| putative alpha-methylacyl-CoA racemase [Neurospora tetrasperma FGSC
2509]
Length = 400
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 151/303 (49%), Positives = 210/303 (69%), Gaps = 10/303 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF---VQDTVGYGKKSLCINLK 59
L G+ VLEFAGLAP PF G++L + GA+V+RID+ + P V D + K SL ++LK
Sbjct: 7 LTGLKVLEFAGLAPGPFAGLLLADAGASVLRIDRAVSGPVARQVPDQLTRHKSSLVVDLK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLC--KSNPRLIYARLSGYGQDGPY 117
G++++K+LA SDV+++P+R GV+EKL LGP VLC + NPRLIYARL+G+ +DG +
Sbjct: 67 SPSGIALVKSLAAVSDVLIDPYRPGVLEKLGLGPSVLCSDECNPRLIYARLTGFRRDGRF 126
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
++MAGHDINYL +SG+LSLLG + PTPP N+ DF GGG + GI++AL R ++G+
Sbjct: 127 ATMAGHDINYLAVSGVLSLLGRKGEKPTPPINILGDFAGGGAVLFQGILLALAARERTGK 186
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV++ N+V+G++YL ++ T + + PRGENLLD G +YDTYET DG++MAVGAL
Sbjct: 187 GQVVEANIVDGASYLATFNRFALKTAVGNAPRGENLLDTGCPYYDTYETADGKYMAVGAL 246
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QF+ +L+ GLG+ + + E R L KFK KT+ EW +IFD TDAC T
Sbjct: 247 EPQFFKELVKGLGLEGQRWEERRGEKENWPELRRVLEHKFKTKTRREWEDIFDGTDACCT 306
Query: 293 PVL 295
V
Sbjct: 307 AVF 309
>gi|452948687|gb|EME54165.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
decaplanina DSM 44594]
Length = 380
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/374 (46%), Positives = 239/374 (63%), Gaps = 17/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP------FVQDTVGYGKKSLCI 56
L G+ V+E AGLAPAPF IL + GA V+RID+ A P F D + G++S+ I
Sbjct: 6 LSGLKVVELAGLAPAPFACTILADLGAEVVRIDR--ATPGNDVIGFPNDPLARGRRSIGI 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
N K +G+ ++ LA+ +DV++E FR GV E++ +GP+ + NPRL+Y R++GYGQDGP
Sbjct: 64 NTKTPEGVELVLKLADDADVLIEGFRPGVAERMGIGPEQVHARNPRLVYGRMTGYGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+++AGHDINY+G+SG L +G + P P NL DFGGGGL+ A+G++ ALFER SG
Sbjct: 124 LATVAGHDINYIGISGALEPIGHAGQRPVVPLNLVGDFGGGGLLLAMGVLAALFERQTSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +MV+G+A L + L D+ LW RGEN+LDGGA FYDTYET DG+++A+GA
Sbjct: 184 KGQVVDASMVDGAALLTTSLHGLLDSGLWPGGRGENMLDGGAPFYDTYETADGKYVAIGA 243
Query: 237 LESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F+ L+ LG+ EE+P H E R + E + T+ E + TDAC+T
Sbjct: 244 IEMRFWGDLVKVLGLDPEEIPVHVDKNEWPKLRKIVAEAVAKHTRDELVAKAEGTDACLT 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP-GVHTREV 351
VLS +A SHPHNV R +F+ + G++ PAPAPR RTP T P P G T EV
Sbjct: 304 AVLSPKEAPSHPHNVARKTFV-DVGGMMQPAPAPRFDRTPAQ---TPEPPRPKGGDTAEV 359
Query: 352 LRHFGYSDANIEEL 365
L G IE L
Sbjct: 360 LAELGVDADGIERL 373
>gi|418460870|ref|ZP_13031955.1| acyl-CoA transferase/carnitine dehydratase [Saccharomonospora
azurea SZMC 14600]
gi|359739042|gb|EHK87917.1| acyl-CoA transferase/carnitine dehydratase [Saccharomonospora
azurea SZMC 14600]
Length = 396
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 162/371 (43%), Positives = 231/371 (62%), Gaps = 11/371 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L+G+ V+E AGLAPAPF +L + GA V+R+D+ V +D + G++++ ++
Sbjct: 22 LRGLRVVELAGLAPAPFACTVLADLGAEVVRVDRVVEGEDVLAMPKDPLLRGRRTIGVDT 81
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G+ V+ L +DV +E FR GV E++ LGP + NPR++Y R++G+GQDGP +
Sbjct: 82 KTPEGVEVVLRLVEDADVFVEGFRPGVTERMGLGPADVHARNPRVVYGRITGWGQDGPLA 141
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+GLSG L +G P PP N ADFGGGG+ A+G++ ALFER SGRG
Sbjct: 142 HTAGHDINYIGLSGALHPIGRHGERPVPPVNFLADFGGGGMYLAMGVLAALFERQTSGRG 201
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +MV+GSA L + L + + LW+ RG N+LDGGA FYDTYET DGR++AVGA+E
Sbjct: 202 QVVDASMVDGSALLTTHLFGLKASGLWEGERGRNILDGGAPFYDTYETADGRYVAVGAIE 261
Query: 239 SQFYAQLLAGLGMTEEELPQ----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
++F+A L+ L + + +P + R L E ++T+ E + TDAC+TPV
Sbjct: 262 TKFFAALVDVLELDPDTVPSRLDPQQWPRLREVLAEAIGKRTRDELVARAEGTDACLTPV 321
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LS +A HPHN RG+F+ + GV PAP P+ RT ++ G T EVLR
Sbjct: 322 LSPWEAPKHPHNAARGTFV-DIDGVAQPAPGPKFDRT--PPELPHPPHPRGSDTVEVLRE 378
Query: 355 FGYSDANIEEL 365
GY D ++ L
Sbjct: 379 LGYGDDELDAL 389
>gi|115522959|ref|YP_779870.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris BisA53]
gi|115516906|gb|ABJ04890.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris BisA53]
Length = 376
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 152/341 (44%), Positives = 217/341 (63%), Gaps = 7/341 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-GKKSLCINLKKA 61
L G ++EFAGL P PF M+L + GA V+ + + + ++ +V G++ + +LK
Sbjct: 22 LAGFRIVEFAGLGPGPFASMMLADMGADVVTLTRGEQKMGLRGSVMMRGRRLITADLKDK 81
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ ++ + L + +D ++E FR GVME+L GPDV+ N RL+YAR++G+GQ GP + A
Sbjct: 82 QCVAEVLTLLDGADALIEGFRPGVMERLGFGPDVVTTRNKRLVYARMTGWGQSGPLKNAA 141
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G L+ +G +N+ P PP NL D+GGG L +G++ AL E +SG+GQV+
Sbjct: 142 GHDINYISLTGALAAIGEKNK-PVPPLNLVGDYGGGALYLVVGVLAALLEAQRSGQGQVV 200
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M +G+A L S + W R NLLDGGAHFY TYE KDG F+A+G++E QF
Sbjct: 201 DVAMCDGAASLMSLFCELTASGRWKDGRESNLLDGGAHFYGTYECKDGEFIALGSIEPQF 260
Query: 242 YAQL--LAGL--GMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA+L LAGL + + +L + +AK+ + FK KT+AEWC I + TD C PVLSL
Sbjct: 261 YAELRRLAGLIDPIYDRQLSPKDWPALKAKMVDVFKTKTRAEWCAIMEGTDVCFAPVLSL 320
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
S+A HPH HR F+ + GV PAPAPR +RTP + T
Sbjct: 321 SEAPQHPHMAHRQVFV-SHDGVTQPAPAPRFARTPSAIRAT 360
>gi|163797139|ref|ZP_02191094.1| putative racemase [alpha proteobacterium BAL199]
gi|159177655|gb|EDP62208.1| putative racemase [alpha proteobacterium BAL199]
Length = 387
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 159/380 (41%), Positives = 224/380 (58%), Gaps = 15/380 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-------QPFVQDTVGYGKKSLC 55
L G VLEFAG+ PAP C M+L + GATV+R+D+ A P + G++S
Sbjct: 4 LTGYRVLEFAGIGPAPMCAMLLADMGATVLRLDRPMAAGDLGIDMPARFELANRGRRSAA 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK+ +G++++ +L ++D ++E FR G ME+L LGP+ NP+L+Y R++G+GQDG
Sbjct: 64 VDLKRPEGVALVLDLTGRADALIEGFRPGTMERLGLGPEPCLTRNPKLVYGRMTGWGQDG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ L+G L +G + PTPP NL DFGGG L A G+V L E +S
Sbjct: 124 PLAHAAGHDINYIALTGALHAIGRAGQPPTPPLNLVGDFGGGSLYLAFGVVCGLLEAQRS 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQV+D M++G+A L + L RGEN+LD GA +YD Y DG +++VG
Sbjct: 184 GQGQVVDAAMIDGAASLMTAFYGLAAAGLHSDRRGENVLDSGASYYDVYACSDGAYLSVG 243
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVE---TGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F + A +G+ E + + + + +TQAEWC I + TDACV
Sbjct: 244 PIEERFRREFYARIGLDETAPTGSDPADWLAAKRLIAARIATRTQAEWCAILEGTDACVA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVHTREV 351
PVLS++ A +HPHN RG+F+ GV+ PAPAPR SRT PGT T PA G T E
Sbjct: 304 PVLSIADAPNHPHNRARGTFV-EIDGVMQPAPAPRFSRTKPGTP--TPPEPA-GASTDEA 359
Query: 352 LRHFGYSDANIEELIREDVI 371
L +G I L VI
Sbjct: 360 LAEWGCDSETIARLRAAGVI 379
>gi|358639915|dbj|BAL27211.1| L-carnitine dehydratase/bile acid-inducible protein F [Azoarcus sp.
KH32C]
Length = 384
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 228/383 (59%), Gaps = 24/383 (6%)
Query: 11 FAGLAPAPFCGMILNEFGATVIRIDK-----HGAQ-PFVQDTVGYGKKSLCINLKKAKGL 64
AG+ P PFCGM+L + GA V+RID+ G P D + K+S+ I+LK +GL
Sbjct: 1 MAGIGPGPFCGMLLADMGADVLRIDRLVETDRGIDFPSKLDLLNRNKRSVAIDLKSEQGL 60
Query: 65 SVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHD 124
+ ++ L + +D+++E FR GVMEKL LGP+ +SNPRL++ R++G+GQDGP + AGHD
Sbjct: 61 ATVRQLISGADMLIEGFRPGVMEKLGLGPEDCLRSNPRLVFGRMTGWGQDGPLNRAAGHD 120
Query: 125 INYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCN 184
+N++ L+G L +G + PT P NL DFGGG L A+G++ A+ E SG GQV+D
Sbjct: 121 LNFIALTGALDAIGQKGAPPTIPLNLVGDFGGGALYLAMGLLAAVIEARSSGAGQVVDAA 180
Query: 185 MVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQ 244
+++G + L + + W RG N++DGGA FY+ YETKDG +++ A+E++FY +
Sbjct: 181 IIDGVSSLMTMQYALKQMGAWPGERGSNIIDGGAPFYNVYETKDGHHVSIAAVEARFYEE 240
Query: 245 LLAGLGMTEEELPQHE---------------VETGRAKLTEKFKEKTQAEWCEIFDNTDA 289
LL +G+ ++LP E E A+ E FK +T+ EWC + + TD
Sbjct: 241 LLEHVGLNSDDLPDEEGRYAADLPEQNDRASWEHMHARFAEIFKTRTRDEWCSLLEGTDT 300
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
C PVL++ + +HPHNV R +F+ GV+ PAPAPR SRT S++ P G T
Sbjct: 301 CFAPVLTMDECVTHPHNVERKAFV-EVGGVLNPAPAPRFSRT--CSELRRPPPRMGADTE 357
Query: 350 EVLRHFGYSDANIEELIREDVIE 372
L +G+S I +L VI+
Sbjct: 358 PALADWGFSPDQISKLGESGVIK 380
>gi|418049042|ref|ZP_12687129.1| Alpha-methylacyl-CoA racemase [Mycobacterium rhodesiae JS60]
gi|353189947|gb|EHB55457.1| Alpha-methylacyl-CoA racemase [Mycobacterium rhodesiae JS60]
Length = 381
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 158/378 (41%), Positives = 224/378 (59%), Gaps = 15/378 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFVQDTVGYGKKSLCINL 58
L G+ V+E AG+ P P+ M+L + GA VIR+++ G P D + ++S+ ++L
Sbjct: 7 LTGVKVIELAGIGPGPYAAMLLADLGAEVIRVERPGPAASEVPPELDVLRRNRRSIVVDL 66
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
+ +G + LA ++D++LE FR GV E+L LGPD NPR++Y R++G+GQ GP +
Sbjct: 67 RHPEGRQTVLALAAKADILLEGFRPGVTERLGLGPDDCLAVNPRIVYGRMTGWGQTGPLA 126
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ ++G L +G P PP NL DFGGG +G++ ALFE + SG+G
Sbjct: 127 PAAGHDINYIAITGALGAIGRSGDGPVPPVNLVGDFGGGSTFLVIGVLAALFEATNSGQG 186
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G++ L + L W RGEN LD G +YD Y+T DG +M+VGALE
Sbjct: 187 QVVDAAIVDGASSLTALLHGLLAADRWIDRRGENFLDTGVPWYDNYQTSDGEWMSVGALE 246
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FYA+ LG+ E G RA +T+ F +T+ +W ++F+ TDACV PV
Sbjct: 247 PKFYAEFTTLLGLDSETAALRADPAGWPRLRAAITDAFAGRTRQQWADVFEGTDACVAPV 306
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVLR 353
LSLS+A HPH R +FI + GV PAPAPR SR+ PG PA G R+VL
Sbjct: 307 LSLSEAAKHPHLAARETFI-DVGGVSQPAPAPRFSRSVPGHPS---PPPAVGADGRQVLS 362
Query: 354 HFGYSDANIEELIREDVI 371
+G D I+ LI VI
Sbjct: 363 DWGIHD--IDRLIEAGVI 378
>gi|404216330|ref|YP_006670525.1| putative acyl-CoA transferases / carnitine dehydratase [Gordonia
sp. KTR9]
gi|403647129|gb|AFR50369.1| putative acyl-CoA transferases / carnitine dehydratase [Gordonia
sp. KTR9]
Length = 370
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 211/336 (62%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G+ P D + G++ + NLK
Sbjct: 15 LSSIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGSLPKPGRNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L ++DVI+E FR GVME+L LGPD L K NP L+Y R++G+GQDGP +
Sbjct: 75 DENDRETILGLVAKADVIVEGFRPGVMERLGLGPDDLEKVNPGLVYGRMTGWGQDGPRAE 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G + P PP NLA DFGGG + +G++ AL ER SGRGQ
Sbjct: 135 LAGHDINYISLTGMLHAIGRADDRPVPPLNLAGDFGGGSMFLVVGVLAALLERGISGRGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG NLLD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMIWAFRGTGLWSDTRGVNLLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GL + + +LP+ KL TE FK +T+ +W +F+ TDAC +PVL
Sbjct: 255 QFYAELLKGLELADADLPEQNDIAQWPKLKEVFTETFKSRTRDDWAAVFEGTDACTSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A + H R + + + GV APR SRT
Sbjct: 315 TFAEAPADAHMAARANLV-DIDGVTQAQVAPRFSRT 349
>gi|367470509|ref|ZP_09470208.1| Alpha-methylacyl-CoA racemase [Patulibacter sp. I11]
gi|365814425|gb|EHN09624.1| Alpha-methylacyl-CoA racemase [Patulibacter sp. I11]
Length = 390
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/381 (41%), Positives = 222/381 (58%), Gaps = 13/381 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ +LE AG+ P PF GM+L + GA VIRID+ G PF D + ++S+ I+L
Sbjct: 14 LAGVRILELAGIGPGPFAGMMLADMGAEVIRIDRPGGNPFAIAPPHDVLYRSRRSIAIDL 73
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K KG+ + L +D + E +R GV E+L +GP+ NP L+Y R++G+GQDGP +
Sbjct: 74 KDPKGIETVLRLCEGADALFEGYRPGVAERLGVGPEDCQARNPALVYGRMTGWGQDGPLA 133
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G L +G R P PP NL DFGGGG++ A G+V + + SGRG
Sbjct: 134 PRAGHDINYIALTGALHAIGRRGEAPMPPLNLVGDFGGGGMLLAYGLVCGIVQARVSGRG 193
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+G++ L + + L + RG N+LD GAHFYD + TKD R++++G +E
Sbjct: 194 QVVDAAMVDGASALMAMFHGLNNAGLHNPERGTNMLDTGAHFYDVFRTKDDRWVSLGPVE 253
Query: 239 SQFYAQLLAGLGMTEE----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA + L + ++ + Q + KL E+T+ E +F+ +DAC PV
Sbjct: 254 PQFYALMCDVLELDDDLRGSQFDQARWPELKQKLAAVVVERTRDELDALFEGSDACYAPV 313
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
L LS+A HPHNV RG+F+ + AG PAPAPR P T H A PG TR L
Sbjct: 314 LELSEAPQHPHNVARGAFV-DVAGQTHPAPAPRFDGAPPTRP---HAAAIPGTDTRATLL 369
Query: 354 HFGYSDANIEELIREDVIEET 374
G+ A I+ELI + E
Sbjct: 370 DAGFDAAEIDELIAAGAVAEA 390
>gi|385677516|ref|ZP_10051444.1| alpha-methylacyl-CoA racemase [Amycolatopsis sp. ATCC 39116]
Length = 388
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 239/386 (61%), Gaps = 12/386 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L G+ V+E G+ PAPF M++++ GA V+RID+ Q D + G++S+ +
Sbjct: 5 LSGVRVVELGGIGPAPFAAMMMSDLGAEVVRIDRPLGGDLGEHQRHELDLLLRGRRSIAL 64
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G + L +++DV+L+PFR GV E+L +GP + + NPRLIY R++G+GQ GP
Sbjct: 65 DLKARRGQETVLRLLDRADVLLDPFRPGVAERLGIGPGPVLERNPRLIYGRMTGWGQTGP 124
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHDINY+ L+G L+ +G R+ P P NL DFGGGG++ +G++ AL ER++S
Sbjct: 125 LATAAGHDINYVALAGPLAAIGRRDAPPPPVLNLVGDFGGGGMVMVVGVLAALLERARSN 184
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQVID MV+G+A L + + + +W+ R +N LDGGA +YD+Y T DGR++ +G+
Sbjct: 185 RGQVIDAAMVDGTAALFASIVGFMNMGVWNGNREDNFLDGGAPYYDSYATADGRYITIGS 244
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+E QFYA LL LG+ E PQ + R +LTE F + W E+F+ TD C P
Sbjct: 245 IEPQFYALLLDRLGLDPGEWPQDDRSRWPALRVRLTEIFASAPRDHWVEVFEGTDVCFAP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VL++ +A +HPH RG+++ G+ PAP PR RTPG+ I +PG HTR L
Sbjct: 305 VLTVDEAMAHPHLKARGTYV-TEFGMRQPAPVPRFDRTPGS--IQSPPCSPGEHTRAALA 361
Query: 354 HFGYSDANIEELIREDVIEETIEMNS 379
+G+++ I ELI V + + S
Sbjct: 362 DWGFAEREIAELIEAGVAVDRPRVTS 387
>gi|398393014|ref|XP_003849966.1| hypothetical protein MYCGRDRAFT_47050 [Zymoseptoria tritici IPO323]
gi|339469844|gb|EGP84942.1| hypothetical protein MYCGRDRAFT_47050 [Zymoseptoria tritici IPO323]
Length = 407
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/308 (48%), Positives = 206/308 (66%), Gaps = 14/308 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQ------PFVQDTVGYGKKSLC 55
L G+ VLEFAGLAP P+ G++L ++GA ++R+D+ H A P D + K S+
Sbjct: 8 LTGVRVLEFAGLAPGPYAGLLLADYGAEILRVDRAHPAAFTDSPPPPTNDALTRHKNSIT 67
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQD 114
+N K G++++K+L D++++PFR GV+EK+ L P+ V+ K NPR+I AR++G+ +D
Sbjct: 68 VNTKTPAGIALLKDLIRNVDIVIDPFRPGVLEKMGLSPENVMQKINPRVIVARMTGFRRD 127
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
G Y MAGHDINY+ +SG+LS+LG NP PP N+ DF GGG + +G+++AL R K
Sbjct: 128 GKYKDMAGHDINYIAVSGVLSMLGREGENPYPPGNIVGDFAGGGAVLFMGVLLALLNRQK 187
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
+G GQV++ NMV+G+A+L S + +T +WD PRG N LDGGA +Y TY TKDG FM+V
Sbjct: 188 TGLGQVVEANMVDGAAHLASMPRFSMNTPMWDGPRGTNTLDGGAPYYGTYATKDGGFMSV 247
Query: 235 GALESQFYAQLLAGLG------MTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTD 288
GALE QFYAQLL GLG M + L + + T FK KT+ EW +IFD TD
Sbjct: 248 GALEPQFYAQLLKGLGIDANDKMAKNRLDKKTWPQQKQVYTRIFKTKTRKEWEDIFDGTD 307
Query: 289 ACVTPVLS 296
ACVTPVL+
Sbjct: 308 ACVTPVLT 315
>gi|420251195|ref|ZP_14754381.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. BT03]
gi|398058496|gb|EJL50392.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. BT03]
Length = 389
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 228/375 (60%), Gaps = 15/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ--------DTVGYGKKSL 54
L GI VLEF + P PF M+L + GA V+RID+ A + D G G++S+
Sbjct: 4 LNGIRVLEFEAIGPGPFGAMLLADMGADVLRIDRPAAPDDLGPKTNGKRIDITGRGRRSV 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK+ + +L ++DV++E +R G ME+L LGP NPRL+Y R++G+GQ
Sbjct: 64 TLDLKQPASAAAALDLIARADVVIEGYRPGTMERLGLGPGEALARNPRLVYGRMTGWGQT 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP ++ AGHD+NY+ LSG+LS +G + P P NL D+GGGG++ ALG+V AL +
Sbjct: 124 GPLAARAGHDLNYIALSGVLSGIGLADGAPVVPLNLVGDYGGGGMLLALGVVSALLNVQR 183
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
G GQV+D M EG+A LG+ + + W + R NLLDGG +YD+Y T+DG +MAV
Sbjct: 184 GGSGQVVDAAMTEGAAQLGAVIWGLLASGNWREQRASNLLDGGTPWYDSYRTRDGHYMAV 243
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDAC 290
GA+E++FYAQLL LG+ + LP+ +G L E F +T+ EWC FD +DAC
Sbjct: 244 GAVEARFYAQLLDKLGLADAGLPKQHDRSGWPVLREAFAVAFAARTRDEWCAAFDGSDAC 303
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
V PVL S+A HP + RGSF+ AGVV PAPAPR S TP S+I P G
Sbjct: 304 VAPVLGFSEAPDHPQHRARGSFV-EVAGVVQPAPAPRFSTTP--SRIDGPAPQRGQGGLR 360
Query: 351 VLRHFGYSDANIEEL 365
LR +G+ DA IE +
Sbjct: 361 ALRDWGFDDAAIERM 375
>gi|418051777|ref|ZP_12689861.1| Alpha-methylacyl-CoA racemase [Mycobacterium rhodesiae JS60]
gi|353184469|gb|EHB49996.1| Alpha-methylacyl-CoA racemase [Mycobacterium rhodesiae JS60]
Length = 361
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/360 (44%), Positives = 213/360 (59%), Gaps = 11/360 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINLKK 60
L G+ V+E AG+ P P MIL + GA V+R+D+ G D + ++S+ NLK
Sbjct: 5 LSGLRVVELAGIGPGPHAAMILGDLGADVVRVDRLGKGTGTPSNDYLLRNRRSVGANLKD 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
++ L ++DV++E FR GV E+L LGP+ K NPRLIY R++G+GQ GP S
Sbjct: 65 PADRDMVLGLIAKADVLIEGFRPGVTERLGLGPEDCAKVNPRLIYGRMTGWGQTGPRSQQ 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+L +G N P PP NLA DFGGG + +GI+ AL+ER +SG GQV
Sbjct: 125 AGHDINYISLNGLLHAVGRVNERPVPPLNLAGDFGGGSMFLLVGILSALWERERSGEGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+GS+ L + + +W RG N+LD GA +YDTYE DGR++AVGA+E Q
Sbjct: 185 VDAAMVDGSSMLVHMMWAFRHMGMWSDVRGTNMLDTGAPYYDTYECSDGRYVAVGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA+LL LG+ +LP T RA LT F + W ++F +DAC TPVLS
Sbjct: 245 FYAELLEKLGLNAADLPDQNDTTRWPELRAVLTATFAAHDRDHWAKVFTGSDACCTPVLS 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRHF 355
++ + PHN R +F AG PAPAPR SR T T P PG VLR +
Sbjct: 305 FAEVDTEPHNTERDTFY-TEAGSTFPAPAPRFSR---TGLETPRAPGIPGADNEAVLRDW 360
>gi|300784386|ref|YP_003764677.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei U32]
gi|384147652|ref|YP_005530468.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|399536271|ref|YP_006548933.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|299793900|gb|ADJ44275.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei U32]
gi|340525806|gb|AEK41011.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|398317041|gb|AFO75988.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
Length = 378
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/367 (46%), Positives = 236/367 (64%), Gaps = 15/367 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP------FVQDTVGYGKKSLCI 56
L G+ V+E AGLAP PF MIL + GA V+R+D+ AQP D + G++S+ +
Sbjct: 6 LGGLKVVELAGLAPGPFATMILADLGADVVRVDR--AQPGEDVLGIPADPLARGRRSVGV 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
N K +G+ ++ L + +DV++E FR GV E++ LGPDV+ NPRL+Y R++G+GQDGP
Sbjct: 64 NTKTPEGVELVLKLCDTADVLIEGFRPGVAERIGLGPDVVHARNPRLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+G++G L +G P PP NL DFGGGGL+ A+G++ AL+ER+ SG
Sbjct: 124 LAKAAGHDINYIGIAGALEPIGRAGERPVPPLNLVGDFGGGGLLLAMGVLAALYERNTSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D +MVEG+A L + L + LW RGEN+LDGGA FYDTYET DG+++AVGA
Sbjct: 184 RGQVVDASMVEGAALLTTSLHGIKAAGLWSGERGENMLDGGAPFYDTYETADGKYVAVGA 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEK----TQAEWCEIFDNTDACVT 292
+E +F++ L+ L + + LP H +T +L E T+ + + TDAC+T
Sbjct: 244 IEMRFWSSLVQVLELDPDSLPLHVDKTQWPRLREILAAAIGKFTRDDLVARAEGTDACLT 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLS ++A SHPHN RG+F+ G+V PAPAPR RTP ++ E A G T VL
Sbjct: 304 PVLSPAEAASHPHNAARGTFV-EIGGMVQPAPAPRFDRTPPSTP--EAPRAKGSDTEAVL 360
Query: 353 RHFGYSD 359
G +D
Sbjct: 361 AELGVTD 367
>gi|448748340|ref|ZP_21729978.1| CoA-transferase family III [Halomonas titanicae BH1]
gi|445564100|gb|ELY20229.1| CoA-transferase family III [Halomonas titanicae BH1]
Length = 385
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 227/384 (59%), Gaps = 23/384 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH--------GAQPFVQDTVGYGKKSL 54
L GI V+E G+ +PF M+L + GA V+RI++ G P +G G++S+
Sbjct: 11 LHGIKVIEVEGIGGSPFAAMLLADMGAEVVRIERPQRNSAEFGGTDP--GPVLGRGRRSI 68
Query: 55 C-INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+NLK GLS++ +L ++DV++E FR GV E+L GPD + NPRLIY RL+G+G+
Sbjct: 69 IGLNLKSPDGLSLLLDLVREADVLIEAFRPGVAERLGFGPDAVHDRNPRLIYGRLTGWGR 128
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP + AGHDINY L+G+L +G ++ P PP L D GGGGL+ A GI+ ALFER
Sbjct: 129 TGPLAHTAGHDINYTALAGVLGAIGRKDSPPAPPLALTGDMGGGGLVLAFGILAALFERH 188
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
SGRGQV+D MV+G+A L S LW+ R N +DGGA +YDTY+ KDGR+++
Sbjct: 189 SSGRGQVVDAAMVDGAALLMSAFWGFHGRGLWNVERESNPVDGGAPYYDTYKCKDGRYIS 248
Query: 234 VGALESQFYAQLLAGLGMT---EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
+GALE QFY L LG+ + E P R +L F +T EWC + + TDAC
Sbjct: 249 IGALEPQFYTVLCDQLGIDVAHDREKPDAWPRQ-REELRVLFLSRTCEEWCRLLEGTDAC 307
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHT 348
PVL+ A SHPH R +FI G+V PAPAPRLSRTP T++ PAP T
Sbjct: 308 FAPVLNFETAPSHPHLQARDTFI-KLGGIVQPAPAPRLSRTPATAQ-----PAPVRFATT 361
Query: 349 REVLRHFGYSDANIEELIREDVIE 372
R L +G + I L+ +++
Sbjct: 362 RTTLNEWGIEETRILALLEAGILQ 385
>gi|118473757|ref|YP_889430.1| alpha-methylacyl-CoA racemase [Mycobacterium smegmatis str. MC2
155]
gi|399989439|ref|YP_006569789.1| alpha-methylacyl-CoA racemase Mcr [Mycobacterium smegmatis str. MC2
155]
gi|118175044|gb|ABK75940.1| alpha-methylacyl-CoA racemase, putative [Mycobacterium smegmatis
str. MC2 155]
gi|399234001|gb|AFP41494.1| Alpha-methylacyl-CoA racemase Mcr [Mycobacterium smegmatis str. MC2
155]
Length = 363
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 222/362 (61%), Gaps = 13/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L+G+ V+E AG+ P P MIL + GA V+RI++ G V +D + ++S+ +L
Sbjct: 5 LQGLRVVELAGIGPGPHAAMILGDLGADVVRIERPGKGGGVPAGDRDAMLRNRRSVVADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ L ++DV++E +R GV E+L LGP+ K N RLIYAR++G+GQDGP +
Sbjct: 65 KAPEGRDLVLQLVAKADVLIEGYRPGVTERLGLGPEDCAKVNERLIYARMTGWGQDGPRA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G L +G + P PP NLA DFGGG + +GI+ AL+ER SG+G
Sbjct: 125 LQAGHDINYISLNGTLHAVGRKGGRPVPPLNLAGDFGGGSMFLLVGILSALYERQASGKG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+GSA L + + +W RG N+LD GA +YDTYET DG+++AVGA+E
Sbjct: 185 QVIDAAMVDGSAVLMEMMWSFRANGMWSDERGTNMLDTGAPYYDTYETADGKYIAVGAIE 244
Query: 239 SQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+LL GLG+ +LP Q+++ R + F +A W ++F+ TDAC TPV
Sbjct: 245 PQFYAELLKGLGLDGADLPAQNDISRWPELREAFAKAFAAHDRAHWTKVFEGTDACTTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVLR 353
LS ++ PH R +F + G + P PAPR SRT PG P G T VLR
Sbjct: 305 LSFAEVLDEPHVAERNTFYDDE-GNLQPMPAPRFSRTQPGRPTPP---PQRGADTEAVLR 360
Query: 354 HF 355
+
Sbjct: 361 DW 362
>gi|336178562|ref|YP_004583937.1| alpha-methylacyl-CoA racemase [Frankia symbiont of Datisca
glomerata]
gi|334859542|gb|AEH10016.1| Alpha-methylacyl-CoA racemase [Frankia symbiont of Datisca
glomerata]
Length = 391
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/366 (41%), Positives = 219/366 (59%), Gaps = 10/366 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFVQDTVGYGKKSLCINL 58
L+G+ V+E AG+ P PF M+L + GA VIR+D+ G P D + G++S+ I+L
Sbjct: 18 LRGLRVVELAGIGPGPFAAMLLADLGADVIRVDRPGEANDIVPPAVDVLRRGRRSVAIDL 77
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
+ G+ + +LA ++DV++E +R GV E+L +GP NPRL+Y R++G+GQDGP +
Sbjct: 78 RSPDGVRAVLDLAERADVLIEGYRPGVAERLGVGPQDCWARNPRLVYGRMTGWGQDGPLA 137
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ ++ L LG + P P N DFGGG L +G++ A+FE ++SGRG
Sbjct: 138 PTAGHDIGYIAITRALHALGRQGEEPAVPVNFLGDFGGGSLYLVVGVLAAVFEAARSGRG 197
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A L + + W RG NLLD G +YD Y T D ++AVG LE
Sbjct: 198 QVVDAAIVDGAASLTAMVYGLLAAGQWRDERGVNLLDTGRPWYDVYRTADDNWVAVGPLE 257
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYAQ + LG+ +E + + R ++ F +T+ EW ++F+ TDACV PVL
Sbjct: 258 PKFYAQFMTLLGLEPDEAERADPAAWPALRERIAAAFARRTRDEWAKVFEGTDACVAPVL 317
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+L++A HPH RG+FI GV PAPAPR SRTP E PG HTR+ L +
Sbjct: 318 NLTEAAGHPHLAARGTFI-EVDGVRQPAPAPRFSRTP--PGRPEPPARPGAHTRQALTDW 374
Query: 356 GYSDAN 361
G D +
Sbjct: 375 GVRDVD 380
>gi|311742081|ref|ZP_07715891.1| fatty acid-CoA racemase [Aeromicrobium marinum DSM 15272]
gi|311314574|gb|EFQ84481.1| fatty acid-CoA racemase [Aeromicrobium marinum DSM 15272]
Length = 389
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/369 (41%), Positives = 219/369 (59%), Gaps = 17/369 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-----VQDTVGYGKKSLCIN 57
L G+ V+E G+ P PF M+L + GA VIR+D+ G D + G+ ++ ++
Sbjct: 15 LAGVKVVEIVGIGPGPFAAMLLADLGADVIRVDRPGGNAMKMTAPQHDILARGRHTVALD 74
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G+ V+ +L +D+++E FR GV E+L GP+ NP L+Y R++G+GQDGP
Sbjct: 75 LKSPRGVEVVLDLVASADILIEGFRPGVTERLGFGPEACHARNPALVYGRMTGWGQDGPL 134
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ ++G L LG P P NL DFGGG L G++ AL +G
Sbjct: 135 AQSAGHDMNYISIAGALDPLGRMGEAPGFPMNLLGDFGGGSLYLVTGVLAALTHARATGE 194
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D + +G+A+L + Q +WD RG N+L +YD Y T D R+M+VG L
Sbjct: 195 GQVVDAAITDGAAHLMAMAVSMQQGGIWDGQRGTNMLGSAVPYYDVYRTADDRYMSVGPL 254
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QF+A L+ +G+ ELP + G R LT++F EKTQAEW EIF ++DACV
Sbjct: 255 EGQFWAVLVERIGV---ELPDRN-DFGRWGELRQALTDRFAEKTQAEWTEIFGDSDACVA 310
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PV+ L +A HPHNV RG+++ + GV PAPAPR S TP +++T A G HTRE L
Sbjct: 311 PVVPLVEAYDHPHNVARGTYVEHH-GVTQPAPAPRFSATP--AELTIPPAAAGTHTREAL 367
Query: 353 RHFGYSDAN 361
+G D +
Sbjct: 368 TAWGIHDVD 376
>gi|358401342|gb|EHK50648.1| hypothetical protein TRIATDRAFT_52972 [Trichoderma atroviride IMI
206040]
Length = 395
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 239/396 (60%), Gaps = 27/396 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH------GAQPFVQDTVGYGKKSLCI 56
LKGI VLEFAGLAP P+ G+IL + GA+V+R+D+ + + D + K S+ I
Sbjct: 10 LKGIKVLEFAGLAPGPYAGLILADAGASVLRVDRPPPISRPQGEISIPDVLARNKSSIVI 69
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G+++++ LA DV+++PFR GV+EKL LGPD L NPRL+Y R++G+ +DG
Sbjct: 70 DLKDPRGIALIRRLAKHVDVLIDPFRPGVLEKLGLGPDELLAINPRLVYGRMTGFRRDGK 129
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
Y+ MAGHDINYL SG+LSLLG P P N+ ADF GGG A G+++A+ R +G
Sbjct: 130 YADMAGHDINYLAASGVLSLLGRSGEKPLAPWNILADFAGGGATLAQGVLLAIISRFSTG 189
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV++ NMV+GS++L S+ T L D+PRG+N LDGG FYDTYET DG +M+VGA
Sbjct: 190 KGQVVEANMVDGSSHLASFPRMYLKTPLGDQPRGKNTLDGGRPFYDTYETSDGEYMSVGA 249
Query: 237 LESQFYAQLLAGLGMTEE--ELPQHEVETGRA---KLTEKFKEKTQAEWCEIFDNTDACV 291
LE QF+ L+ GLG+ + E +H+ + T+ FK KT+++W +FD TDAC
Sbjct: 250 LEPQFFQALIKGLGLEGQGWETKRHDPSSWPQLYDLFTKTFKSKTRSQWEAVFDGTDACC 309
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS--RTPGTSKITEHNPAP---GV 346
PVL S+ + P+R G PA R + +P ++ + P G
Sbjct: 310 VPVLHYSELETQ----------PDREGDQRPAVTLRDTPLYSPADAEGKGYVAEPLVLGR 359
Query: 347 HTREVLRHF-GYSDANIEELIREDVIEETIEMNSKL 381
T EVLR + G+ + + E + + + NSKL
Sbjct: 360 GTEEVLREWAGWKNGDEYEFQKGAAVLKDKRENSKL 395
>gi|424855738|ref|ZP_18280039.1| fatty acid-CoA racemase [Rhodococcus opacus PD630]
gi|356663490|gb|EHI43616.1| fatty acid-CoA racemase [Rhodococcus opacus PD630]
Length = 385
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 232/385 (60%), Gaps = 13/385 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-----DTVGYGKKSLCIN 57
L G VLE AGL P PF GM+L + GA V+R+D+ G F D + GK+SL ++
Sbjct: 5 LSGCRVLELAGLGPGPFAGMLLADLGAEVVRVDRPGGSGFFAGMEDIDILNRGKQSLLLD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK+ + + V+ + +DV++E +R GV EKL +GP+ N +L+Y R++G+GQDGP
Sbjct: 65 LKRPEAVDVLLGMIEHADVLIEGYRPGVAEKLGVGPEACLARNRKLVYGRITGWGQDGPL 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI+Y+ L+G L +G + P P NL DFGGGG +G++ AL + ++G
Sbjct: 125 AQTAGHDIDYVALTGALHAIGPADGPPQIPLNLLGDFGGGGAYLVIGVLAALRDADRTGT 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G +L S + +W R N+LDGG +Y YET DGR MAVGAL
Sbjct: 185 GQVVDAAIVDGVTHLLSAVHMMMAAGVWADRRESNMLDGGTPYYSVYETADGRHMAVGAL 244
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E +FYA+LLAGLG+ E QH+ RAK+ FK ++QA+W F ++DAC P+
Sbjct: 245 EPKFYAELLAGLGLDEPTGLQHDKSRWPGLRAKIAAAFKTRSQADWSAHFAHSDACAAPI 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
+L+ A +PH R S + GV+ APAPR S+ G +++ P PG H+REVL++
Sbjct: 305 ETLTGAADNPHVRARRSLV-EVGGVLQSAPAPRFSK--GRARVNWPPPRPGEHSREVLKN 361
Query: 355 FGYSDANIEELIREDVIEETIEMNS 379
+G + +++LI V E E+ +
Sbjct: 362 WGSDE--VDDLIARGVAIEAEEVAT 384
>gi|108801033|ref|YP_641230.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. MCS]
gi|119870174|ref|YP_940126.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. KMS]
gi|126436869|ref|YP_001072560.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. JLS]
gi|108771452|gb|ABG10174.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. MCS]
gi|119696263|gb|ABL93336.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. KMS]
gi|126236669|gb|ABO00070.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. JLS]
Length = 363
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/361 (43%), Positives = 221/361 (61%), Gaps = 11/361 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L+G+ V+E AG+ P P MIL + GA V+RI++ G P + D + ++S+ NL
Sbjct: 5 LQGLRVVELAGIGPGPHAAMILGDLGADVVRIERPGKGPGIPTKGSDQLLRNRRSVGANL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ L ++DV++E FR GV E+L LGP+ K N RLIY R++G+GQ GP S
Sbjct: 65 KTDEGRELVLRLIAKADVLIEGFRPGVTERLGLGPEDCAKVNERLIYGRMTGWGQTGPRS 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G+L +G P PP NLA DFGGG + +GI+ AL+ER +SG+G
Sbjct: 125 QQAGHDINYISLNGVLHAVGRAGERPVPPLNLAGDFGGGSMFLLVGILAALWERERSGKG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+GS+ L + + +W RG N+LD GA +YDTYET DGR++AVGA+E
Sbjct: 185 QVVDAAMVDGSSVLAQMMWAFRAMGMWSDERGVNMLDTGAPYYDTYETSDGRYVAVGAIE 244
Query: 239 SQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA++L LG+ LP Q+++ RA LT+ F E + W ++F +DACVTPV
Sbjct: 245 PQFYAEMLDKLGLDPAGLPDQNDMSRWPELRAVLTKAFAEHDRDHWAKVFTGSDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LS + + PHN R +F + PAPAPR SRT T+ PG T VL
Sbjct: 305 LSFGEVEAEPHNTERDTFY-REGDFLFPAPAPRFSRT--TTTTPTPPGVPGADTEAVLND 361
Query: 355 F 355
+
Sbjct: 362 W 362
>gi|389629146|ref|XP_003712226.1| alpha-methylacyl-CoA racemase [Magnaporthe oryzae 70-15]
gi|351644558|gb|EHA52419.1| alpha-methylacyl-CoA racemase [Magnaporthe oryzae 70-15]
gi|440469080|gb|ELQ38203.1| alpha-methylacyl-CoA racemase [Magnaporthe oryzae Y34]
gi|440487562|gb|ELQ67344.1| alpha-methylacyl-CoA racemase [Magnaporthe oryzae P131]
Length = 403
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 205/304 (67%), Gaps = 8/304 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VLEFAGLAP PF GM L + GA+V+R+D+ G P +D + K S+ ++LK A
Sbjct: 8 LAGLKVLEFAGLAPGPFAGMFLADAGASVLRLDRPGRAP-TEDMLARRKASIAVDLKSAG 66
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G+++ LA DV+++PFR GV+E+L LGPDVL +NPRLIYAR++G+ +DG Y+ MAG
Sbjct: 67 GVALAAKLAGHVDVLIDPFRPGVLERLGLGPDVLRAANPRLIYARIAGFRRDGKYADMAG 126
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER-SKSGRGQVI 181
HDINYL +SG LS+LG + PTPP N+ ADF GGG GI++AL R + G+GQV+
Sbjct: 127 HDINYLAVSGALSMLGRKGEKPTPPWNILADFAGGGANLFQGILLALAARGANGGKGQVV 186
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQ 240
+ NMV+GSAYL ++ T L PRGEN+LD G FYDTYET D G +MAVGALE Q
Sbjct: 187 EANMVDGSAYLATFPRMALKTILGGAPRGENMLDTGCPFYDTYETADSGSYMAVGALEPQ 246
Query: 241 FYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
F+A L+ GLG+ + ++ + R + FK +T+AEW +FD TDAC TPVL
Sbjct: 247 FFAVLMRGLGLHGQGWEENRYDRDHWPELRTLFEKTFKSRTRAEWENVFDGTDACCTPVL 306
Query: 296 SLSQ 299
+ +
Sbjct: 307 TFPE 310
>gi|358055901|dbj|GAA98246.1| hypothetical protein E5Q_04929 [Mixia osmundae IAM 14324]
Length = 434
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/419 (41%), Positives = 246/419 (58%), Gaps = 52/419 (12%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+TVLEFAGLAP PF GM+L +FGA VIR+D+ G F DT+ GK+S+ I+ K A
Sbjct: 5 LDGLTVLEFAGLAPGPFAGMVLADFGARVIRVDRPGTN-FNSDTLCRGKESISISPKSAS 63
Query: 63 GLSVMKNL--ANQS-----DVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
G ++ +L NQ DVI++PFR GV+E+L LGPDVL +NP ++ ARL+GY + G
Sbjct: 64 GKEILLDLIKPNQQGWKGVDVIIDPFRPGVLERLGLGPDVLLAANPGVVVARLTGYRRTG 123
Query: 116 PYSSMAGHDINYLGLSGILSLL--GWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
Y+ MAGHDINY+ LSG+LS+L P PP NL DF GGGLMC LGI++AL ER+
Sbjct: 124 EYAKMAGHDINYIALSGVLSMLRPSQGKSAPFPPANLLGDFAGGGLMCVLGILLALIERT 183
Query: 174 KSGRGQVIDCNMVEGSAYLGSW---LTRTQDTF-LWDKPRGENLLDGGAHFYDTYETKDG 229
+SG+GQ+++ +M+ G+ Y+ S+ L++ +W + G+N+LDGGA +Y YET+DG
Sbjct: 184 RSGQGQIVEADMITGTRYVSSFPLMLSKLSVGMPIWSEKAGDNVLDGGAPWYGVYETRDG 243
Query: 230 RFMAVGALESQFYAQLLAGL------------GMTEEELP------------QHEVETG- 264
++M+VGA+ESQFY + L L +T P QH+ T
Sbjct: 244 KYMSVGAIESQFYEEFLQILIKSLLDSPPPKDSLTPTAAPAPSNYRYPSPATQHDRSTWP 303
Query: 265 --RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRA----- 317
R T F +T+ EW +F TDACV PVL + + H +H ++ +
Sbjct: 304 ELRTFFTTAFATRTRDEWTSVFMGTDACVAPVLEKEEVSRHGVTIHEEAYGRDMQEEEED 363
Query: 318 -GVVAPAPAPRLSRTPGTS---KITE-HNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
G + P P+P LSRTP + +E + PG TREVL G + ++ L +E VI
Sbjct: 364 EGTI-PEPSPILSRTPARQARGQFSEGYTLEPGRDTREVLLCAGIDERMLDSLAKEGVI 421
>gi|296165549|ref|ZP_06848078.1| alpha-methylacyl-CoA racemase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295899127|gb|EFG78604.1| alpha-methylacyl-CoA racemase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 371
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/379 (43%), Positives = 226/379 (59%), Gaps = 19/379 (5%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD---TVGYGKKSLCINLKKAK 62
+ VL+ + L P PFC M+L +FGA V+ +++ G P D + GK+S I+L+ +
Sbjct: 1 MRVLDLSALGPGPFCSMLLADFGADVVTVERPGV-PLRFDPAANLSRGKRSAAIDLRAPR 59
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G V+ LA+ +DV+LE R G+ME+ LGPDV+C NPRLIYARL+G+GQDGPYS AG
Sbjct: 60 GAEVIARLADHADVLLESNRPGIMERRGLGPDVVCGRNPRLIYARLTGWGQDGPYSDRAG 119
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY ++G L +G + P P D GG L+ ALGI+MALFER+++G+GQVID
Sbjct: 120 HDINYTAVAGTLGTIG--SEKPVTPLAYVGDLAGGSLVTALGIMMALFERTRTGKGQVID 177
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G+A L + ++ LW RG++LL GGA FY YE +DGRF AVGA+E +FY
Sbjct: 178 GAIVDGAALLAAIHLAELNSGLWSG-RGKHLLSGGAPFYGVYECQDGRFFAVGAIEPKFY 236
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
AQ L+ LG+ + L TG +L E+ F+ K ++ W +F + D C PVL L
Sbjct: 237 AQFLSALGIEDIALAAQLDPTGWGQLQERIAEAFRSKARSHWSAVFADIDGCGAPVLELD 296
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP---GVHTREVLRHF 355
+ PH R + + + G V APAPRLSRTP + PAP G T VL
Sbjct: 297 ELADDPHLRARNTILASDDGTVTVAPAPRLSRTPARLR-----PAPASRGADTSAVLGEA 351
Query: 356 GYSDANIEELIREDVIEET 374
G++ I EL + I T
Sbjct: 352 GFTADEIRELQADGTITTT 370
>gi|406028352|ref|YP_006727241.1| alpha-methylacyl-CoA racemase [Mycobacterium indicus pranii MTCC
9506]
gi|405126899|gb|AFS12154.1| Alpha-methylacyl-CoA racemase [Mycobacterium indicus pranii MTCC
9506]
Length = 371
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/378 (43%), Positives = 224/378 (59%), Gaps = 17/378 (4%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-PF-VQDTVGYGKKSLCINLKKAKG 63
+ VL+ + L P PFC M+L +FGA V+ +++ G PF + GK+S I+L+ +G
Sbjct: 1 MRVLDLSALGPGPFCSMLLADFGADVVAVERPGVPLPFDPAANLSRGKRSAAIDLRAPRG 60
Query: 64 LSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGH 123
V+ LA+ +DV+LE R G ME+ LGPDVLC NPRLIYARL+G+GQDGPYS AGH
Sbjct: 61 AEVIARLADHADVLLESNRPGTMERRGLGPDVLCARNPRLIYARLTGWGQDGPYSDRAGH 120
Query: 124 DINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDC 183
DINY ++G L +G + P P D GG L+ ALGI+MALFER+++G+GQVID
Sbjct: 121 DINYTAVAGTLGTIG--SEKPVTPLAYVGDLAGGSLVTALGIMMALFERTRTGKGQVIDG 178
Query: 184 NMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYA 243
+V+G+A L + ++ LW RG++LL GGA FY YE +DGRF AVGA+E +FYA
Sbjct: 179 AIVDGAALLAAIHLAELNSGLWSG-RGKHLLSGGAPFYGVYECEDGRFFAVGAIEPKFYA 237
Query: 244 QLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
Q L+ L + + L TG R ++ E F+ K ++ W +F + D C PVL L +
Sbjct: 238 QFLSALDIEDIALAAQLDPTGWAQLRERIAEAFRSKARSHWSAVFADIDGCGAPVLELDE 297
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP---GVHTREVLRHFG 356
PH R + + + G V APAPRLSRTP + PAP G T VL G
Sbjct: 298 LADDPHLRARNTILASDDGTVTVAPAPRLSRTPARLR-----PAPASRGADTSAVLGEAG 352
Query: 357 YSDANIEELIREDVIEET 374
++ I EL + I T
Sbjct: 353 FTADEIRELQADGTITTT 370
>gi|398823503|ref|ZP_10581863.1| putative acyl-CoA transferase/carnitine dehydratase [Bradyrhizobium
sp. YR681]
gi|398225828|gb|EJN12090.1| putative acyl-CoA transferase/carnitine dehydratase [Bradyrhizobium
sp. YR681]
Length = 368
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 211/341 (61%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LSGFRIVEFAGIGPGPFACMMLADMGADVVTLDRVGAKKSMKSVAGRGRKVIELDLKNKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ+GP ++ AG
Sbjct: 77 AIAEVLDLLASADALVEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQEGPLANAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + +P PP NL DFGGG L +G++ AL E KSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGPKE-SPVPPLNLVGDFGGGALYLVVGVLAALLEAQKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S+ W + R +N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 AAMCDGAASLMSFFFDMTTLGRWTEGRNQNFLDGGAHFYGVYECACGHFVSIGSIEPQFY 255
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+T+ + L EK FK KT+ +WC I + TD C PVL++S
Sbjct: 256 ALLREHAGLTDADFDAQMNPKAWPALKEKLKAVFKSKTREDWCRIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+AT HPH V R F+ R GV P PAPR SRTP + E
Sbjct: 316 EATEHPHMVARQVFV-ERHGVKQPGPAPRFSRTPSAVREPE 355
>gi|441507351|ref|ZP_20989277.1| alpha-methylacyl-CoA racemase [Gordonia aichiensis NBRC 108223]
gi|441448427|dbj|GAC47238.1| alpha-methylacyl-CoA racemase [Gordonia aichiensis NBRC 108223]
Length = 383
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/342 (45%), Positives = 212/342 (61%), Gaps = 9/342 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L GI V+EFAG+ P P M+L + GA V+RI + G P D + G++ + NLK
Sbjct: 28 LNGIRVVEFAGIGPGPHAAMMLADLGADVVRIQRPGQLPDPARNADALLRGRRVVEANLK 87
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L ++DV+LE FR GVME+L GP L N RL+Y R++G+GQ GP +
Sbjct: 88 DPADREQIMRLIGKADVLLEGFRPGVMERLGFGPSDLEAVNERLVYGRMTGWGQTGPRAP 147
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L +G P PP NL DFGGG + +G++ AL ER+ SGRGQ
Sbjct: 148 QAGHDINYISLTGMLHAIGRAGERPVPPMNLVGDFGGGSMFLVMGVLSALVERASSGRGQ 207
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG N+LD GA +Y+ YET DGR+MAVGA+E
Sbjct: 208 VVDAAMVDGASVLGQMIWAFRGTGLWSDERGTNMLDTGAPYYEVYETSDGRYMAVGAIEP 267
Query: 240 QFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GLG+T+ +LP Q++V R TE F +T+ EW ++F+ TDACV+PVL
Sbjct: 268 QFYAELLRGLGLTDADLPGQNDVAEWPRLREIFTETFASRTRDEWAKVFEGTDACVSPVL 327
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSK 336
+ ++A PH R + + GV APR SRT P T +
Sbjct: 328 TFAEAPDDPHMSARANLV-EIDGVRQAQAAPRFSRTAPSTPR 368
>gi|27375449|ref|NP_766978.1| alpha-methylacyl-CoA racemase [Bradyrhizobium japonicum USDA 110]
gi|27348586|dbj|BAC45603.1| Alpha-methylacyl-CoA racemase [Bradyrhizobium japonicum USDA 110]
Length = 388
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 213/341 (62%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 35 LSGFRIVEFAGIGPGPFACMMLADMGADVVTLDRVGAKKSMKSVAGRGRKVIELDLKDKA 94
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGP+++ NP+L+Y R++G+GQ+GP ++ AG
Sbjct: 95 AIAQVLDLLASADALVEGFRPGVMERLGLGPEMVLARNPKLVYGRMTGWGQEGPLANAAG 154
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + P PP NL DFGGG L +G++ AL E S+SG+GQV+D
Sbjct: 155 HDINYISITGALAAIGPKE-APVPPLNLVGDFGGGALYLVVGVLAALLEASRSGKGQVVD 213
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S+ W + R +N LDGGAHFY YE G F+++G++E QFY
Sbjct: 214 AAMCDGAASLMSFFFDMTTIGRWTEGRNQNFLDGGAHFYGVYECACGHFVSIGSIEPQFY 273
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+T+ + L EK FK KT+ +WC+I + TD C PVL++S
Sbjct: 274 ALLRQHAGLTDADFDAQMDRKAWPALKEKLKAVFKSKTREDWCKIMEGTDICFAPVLTMS 333
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+AT HPH V R F+ R GV PAPAPR SRTP + E
Sbjct: 334 EATQHPHMVARQVFV-ERHGVKQPAPAPRFSRTPSAVREPE 373
>gi|312141267|ref|YP_004008603.1| alpha-methylacyl-CoA racemase [Rhodococcus equi 103S]
gi|311890606|emb|CBH49924.1| putative alpha-methylacyl-CoA racemase [Rhodococcus equi 103S]
Length = 366
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 212/340 (62%), Gaps = 8/340 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF---VQDTVGYGKKSLCINLK 59
L GI V+EFAG+ P P +L + GA V+R+ + G P V D ++ + +LK
Sbjct: 12 LTGIRVVEFAGIGPGPHAATLLADLGADVVRVQRAGMLPAEGQVGDQTARNRRVVEADLK 71
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + L ++D+++E FR GVME++ LGPDV+ + PRL+Y R++G+GQDGP +
Sbjct: 72 NPADVEKVVELLGRADILIEGFRPGVMERMGLGPDVVLERCPRLVYGRMTGWGQDGPLAQ 131
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ L+G+L +G + P PP N+ DFGGG + G++ AL ER SG+GQ
Sbjct: 132 SAGHDLNYISLTGVLHAVGRKGERPVPPLNMVGDFGGGSMFLLFGLLAALVERQTSGKGQ 191
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G+ L + + +W RG N LDGGA +YDTYET DG++MAVGA+E
Sbjct: 192 VIDAAMVDGTLALSHIIWNFRRIGMWSDERGVNFLDGGAPYYDTYETSDGKYMAVGAIEP 251
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GL + LP + + R LT+KF KT+ EW +IFD TDAC TPVL
Sbjct: 252 QFYAELLKGLELDPATLPGQQDASRWPELRQILTDKFLSKTRDEWTKIFDGTDACTTPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
+ ++A + PH RGS I GV APAPR SRTP T+
Sbjct: 312 TFTEAPNDPHIAARGSII-ELEGVTQHAPAPRFSRTPTTA 350
>gi|404425105|ref|ZP_11006601.1| alpha-methylacyl-CoA racemase [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403649272|gb|EJZ04673.1| alpha-methylacyl-CoA racemase [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 363
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/361 (42%), Positives = 227/361 (62%), Gaps = 11/361 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L+G+ V+E AG+ P P MIL + GA V+R+++ G V +D++ ++S+ +L
Sbjct: 5 LQGLRVVELAGIGPGPHAAMILGDLGADVVRVERPGRSGGVPAGERDSMLRNRRSVAADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ L +++DV++E +R GV E+L LGP+ K N RLIYAR++G+GQ+GP +
Sbjct: 65 KSDEGRELVLKLISKADVLIEGYRPGVTERLGLGPEDCAKINDRLIYARMTGWGQEGPRA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G+L +G + P PP NLA DFGGG + +G++ ALFER SG+G
Sbjct: 125 LQAGHDINYISLNGLLHAVGRKGERPVPPLNLAGDFGGGSMFLLVGVLSALFERQTSGKG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+GS+ L + + +W RG N+LD GA +YDTYET DG++MA+GA+E
Sbjct: 185 QVIDAAMVDGSSVLMQMMWSFRSQGMWSDERGTNMLDTGAPYYDTYETADGKYMAIGAIE 244
Query: 239 SQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+LL GLG+ +LP Q+++ R T+ F + W ++F TDAC TPV
Sbjct: 245 PQFYAELLKGLGLDGADLPGQNDMARWPELREAFTKAFAAHDRDHWAKVFAGTDACATPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LS ++ + PH R +F + G + P PAPR SR+ T++ T P G T VLR
Sbjct: 305 LSFAEVLTEPHIAERDTFF-DDGGHLQPMPAPRFSRST-TAEPTPPRPR-GADTEAVLRD 361
Query: 355 F 355
+
Sbjct: 362 W 362
>gi|120405530|ref|YP_955359.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium vanbaalenii PYR-1]
gi|119958348|gb|ABM15353.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium vanbaalenii PYR-1]
Length = 364
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 221/363 (60%), Gaps = 14/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-----DTVGYGKKSLCIN 57
L+G+ V+E AG+ P P MIL + GA V+RI++ G P D + ++S+ N
Sbjct: 5 LQGLRVVELAGIGPGPHAAMILGDLGADVVRIERPGKGPGPATKPGGDYLLRNRRSVAAN 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + ++ L ++DV++E FR GV E+L LGP K N +LIYAR++G+GQDGP
Sbjct: 65 LKSEEDRDMVLRLIAKADVLIEGFRPGVTERLGLGPHDCAKVNEKLIYARMTGWGQDGPR 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ L+G L +G P PP NL DFGGG + +G++ AL+ER +SG+
Sbjct: 125 AQQAGHDINYISLNGALHAIGRAGERPVPPLNLVGDFGGGSMFLLVGVLSALYERERSGK 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+GS+ L + + +W RG N+LD GA +YDTYET DG+++AVGA+
Sbjct: 185 GQVVDAAMVDGSSVLSMMMWAFRGMGMWSDERGTNMLDTGAPYYDTYETADGKYVAVGAI 244
Query: 238 ESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYA++L G+G+ +LP Q+++ R T+ F + W ++F TDACVTP
Sbjct: 245 EPQFYAEMLKGIGLDGADLPDQNDMSRWPELREAFTKAFAAHDRDHWAKVFAGTDACVTP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVL 352
VLS ++ S PHN R +F + G + PAPAPR SR+ P K PG T VL
Sbjct: 305 VLSFAEVESEPHNTERDTFY-SENGSLYPAPAPRFSRSAPSAPKPPG---VPGADTEAVL 360
Query: 353 RHF 355
R +
Sbjct: 361 REW 363
>gi|407279252|ref|ZP_11107722.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus
sp. P14]
Length = 386
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 223/365 (61%), Gaps = 17/365 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L G+ VLE G+ P PF GM L + GA V+RI++ G +P QD + GK+++ +
Sbjct: 10 LNGLKVLEIGGMGPGPFAGMTLADMGAEVVRIERPGGLGVFPGKP-TQDVLNRGKRAVSL 68
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ + + ++D+++E R GV E+L +GP NP+L+Y R++G+GQDGP
Sbjct: 69 DLKTPQAVAALLAMVERADLLIEGHRPGVAERLGIGPAECWARNPKLVYGRMTGWGQDGP 128
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S AGHD++Y+ ++G L +G + P P N+ DFGGGG+ G++ AL E ++G
Sbjct: 129 LSHTAGHDVSYIAITGALHAIGDADGPPQIPLNIVGDFGGGGMYLVAGVLAALREAEQTG 188
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQ++D +V+G A+L + +T W RG NLLDGGA FY YET DGR+MAVGA
Sbjct: 189 RGQIVDAAIVDGVAHLLAGTHAMVNTGTWADERGANLLDGGAPFYSVYETSDGRYMAVGA 248
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK-----FKEKTQAEWCEIFDNTDACV 291
+ES+FY QLLAGL + + P H+ + R T+K F +T+AEW FD TDACV
Sbjct: 249 IESKFYTQLLAGLDVDID--PTHQHDRARWPATKKQIAAAFGTRTRAEWVARFDGTDACV 306
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PV+SL +A HPH RG+ + + G++ P PAPR P + P PG HTREV
Sbjct: 307 APVVSLHEAAEHPHMKQRGA-VSVQNGLLQPGPAPRFPSHPVVRPTSP--PTPGQHTREV 363
Query: 352 LRHFG 356
L +G
Sbjct: 364 LSGWG 368
>gi|326480639|gb|EGE04649.1| isopenicillin N-CoA epimerase [Trichophyton equinum CBS 127.97]
Length = 399
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/318 (48%), Positives = 213/318 (66%), Gaps = 21/318 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQ----PFVQDTVGYGKKS 53
L+GI V+E AGLAP PF G++L+++GA+V+RID+ H + P D + K S
Sbjct: 8 LQGIRVVELAGLAPGPFAGLMLSDYGASVVRIDRPHPNTHSSSKPVPPPTFDALTRHKTS 67
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYG 112
+ ++LK +V+ +L +++DV+++P+R GV+EKL L P VL K NPRLI AR++G+
Sbjct: 68 ISLDLKNPASKAVLLSLLSKADVLIDPYRPGVLEKLGLCPTTVLLKHNPRLIIARMTGFR 127
Query: 113 QDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
+DG Y MAGHDINY+ +SG LSLLG + P P N+ DF GGG +C GI++AL R
Sbjct: 128 RDGKYKDMAGHDINYIAVSGALSLLGREGQKPYAPGNILGDFAGGGAVCFQGILLALLAR 187
Query: 173 SKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRF 231
+GRGQV++ NMV+GSAYL ++ + T +WD PRG N+LDGG +YDTYETKD GR+
Sbjct: 188 QTTGRGQVVNANMVDGSAYLATFPRLARQTPMWDGPRGSNVLDGGCPYYDTYETKDKGRY 247
Query: 232 MAVGALESQFYAQLLAGLGMTEEE-------LPQHEVETG---RAKLTEKFKEKTQAEWC 281
AVGALE QFY+ LL GLG+ EEE + + + E R KF+EKT++EW
Sbjct: 248 FAVGALEPQFYSALLDGLGLREEEVFPLGSSMERQDKENWPYMRTVFARKFREKTRSEWE 307
Query: 282 EIFDNTDACVTPVLSLSQ 299
IFD TDAC TPVL++ +
Sbjct: 308 AIFDGTDACATPVLTMDE 325
>gi|453366428|dbj|GAC78203.1| alpha-methylacyl-CoA racemase [Gordonia malaquae NBRC 108250]
Length = 371
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 218/353 (61%), Gaps = 14/353 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G P D + G++ + NLK
Sbjct: 16 LANIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGELPDPNRNADALLRGRRVVEANLK 75
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ NL ++DV++E FR GVME+L GPD L + N L+Y R++G+GQ+GP ++
Sbjct: 76 NPADRETILNLVAKADVVIEGFRPGVMERLGFGPDDLAQVNSSLVYGRMTGWGQEGPRAN 135
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHD+NY+ L+G+L +G + PTPP NL DFGGG + +GI+ AL ERS SG+G+
Sbjct: 136 LAGHDMNYISLTGMLHAIGRPDEKPTPPLNLVGDFGGGSMFLVMGILAALVERSVSGKGE 195
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID M +G++ LG + + T LW RG NLLD GA FY+ YET DG++MAVGA+E
Sbjct: 196 VIDAAMCDGASVLGQMMWAFRGTGLWQDRRGVNLLDTGAPFYEVYETSDGKWMAVGAIEP 255
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFY++L+ GLG+ E +P H+++ RA E FK KT+ EW IF+ TDAC +P+
Sbjct: 256 QFYSELIKGLGLDPEAIP-HQMDFSKWPEQRAIFEETFKTKTRDEWAAIFEGTDACTSPI 314
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR----TPGTSKITEHNPA 343
L +A + PH RGS + GV+ APR SR TP + T +PA
Sbjct: 315 LDFVEAPNDPHLAARGSLV-EIDGVMQAQVAPRFSRSKTVTPTGPQRTATDPA 366
>gi|384214022|ref|YP_005605185.1| alpha-methylacyl-CoA racemase [Bradyrhizobium japonicum USDA 6]
gi|354952918|dbj|BAL05597.1| alpha-methylacyl-CoA racemase [Bradyrhizobium japonicum USDA 6]
Length = 368
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 211/341 (61%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G V+EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LSGFRVVEFAGIGPGPFACMMLADMGADVVTLDRVGAKKSMKSVAGRGRKVIELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ+GP ++ AG
Sbjct: 77 AIAEVLDLLASADALVEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQEGPLANAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + P PP NL DFGGG L +G++ AL E +SG+GQV+D
Sbjct: 137 HDINYISITGALAAIGTKE-APVPPLNLVGDFGGGALYLVVGVLAALLEAQRSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S+ W + R +N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 AAMCDGAASLMSFFFDMTTIGRWTEGRNQNFLDGGAHFYGVYECACGHFVSIGSIEPQFY 255
Query: 243 AQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+++ + + KL FK KT+ +WC I + TD C PVL++S
Sbjct: 256 ALLREHAGLSDADFDAQMDRKAWPALKQKLQAVFKSKTREDWCRIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+AT HPH V R F+ R GV PAPAPR SRTP + E
Sbjct: 316 EATEHPHMVARNVFL-ERHGVKQPAPAPRFSRTPSAVREPE 355
>gi|325673900|ref|ZP_08153590.1| fatty acid-CoA racemase [Rhodococcus equi ATCC 33707]
gi|325555165|gb|EGD24837.1| fatty acid-CoA racemase [Rhodococcus equi ATCC 33707]
Length = 355
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 212/340 (62%), Gaps = 8/340 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF---VQDTVGYGKKSLCINLK 59
+ GI V+EFAG+ P P +L + GA V+R+ + G P V D ++ + +LK
Sbjct: 1 MTGIRVVEFAGIGPGPHAATLLADLGADVVRVQRAGMLPAEGQVGDQTARNRRVVEADLK 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + L ++D+++E FR GVME++ LGPDV+ + PRL+Y R++G+GQDGP +
Sbjct: 61 NPADVEKVVELLGRADILIEGFRPGVMERMGLGPDVVLERCPRLVYGRMTGWGQDGPLAQ 120
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ L+G+L +G + P PP N+ DFGGG + G++ AL ER SG+GQ
Sbjct: 121 SAGHDLNYISLTGVLHAVGRKGERPVPPLNMVGDFGGGSMFLLFGLLAALVERQTSGKGQ 180
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G+ L + + +W RG N LDGGA +YDTYET DG++MAVGA+E
Sbjct: 181 VIDAAMVDGTLALSHIIWNFRRIGMWSDERGVNFLDGGAPYYDTYETSDGKYMAVGAIEP 240
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GL + LP + + R LT+KF KT+ EW +IFD TDAC TPVL
Sbjct: 241 QFYAELLKGLELDPATLPGQQDASRWPELRQILTDKFLSKTRDEWTKIFDGTDACTTPVL 300
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
+ ++A + PH RGS I GV APAPR SRTP T+
Sbjct: 301 TFTEAPNDPHIAARGSII-ELEGVTQHAPAPRFSRTPTTA 339
>gi|326469034|gb|EGD93043.1| hypothetical protein TESG_00600 [Trichophyton tonsurans CBS 112818]
Length = 398
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/319 (48%), Positives = 214/319 (67%), Gaps = 24/319 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQ-----PFVQDTVGYGKK 52
L+GI V+E AGLAP PF G++L+++GA+V+RID+ H + PF D + K
Sbjct: 8 LQGIRVVELAGLAPGPFAGLMLSDYGASVVRIDRPHPNAHSSSKPVPPPF--DALTRHKT 65
Query: 53 SLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGY 111
S+ ++LK +V+ +L +++DV+++P+R GV+EKL L P VL K NPRLI AR++G+
Sbjct: 66 SISLDLKNPASKAVLLSLLSKADVLIDPYRPGVLEKLGLCPTTVLLKHNPRLIIARMTGF 125
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
+DG Y MAGHDINY+ +SG LSLLG + P P N+ DF GGG +C GI++AL
Sbjct: 126 RRDGKYKDMAGHDINYIAVSGALSLLGREGQKPYAPGNILGDFAGGGAVCFQGILLALLA 185
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GR 230
R +GRGQV++ NMV+GSAYL ++ + T +WD PRG N+LDGG +YDTYETKD GR
Sbjct: 186 RQTTGRGQVVNANMVDGSAYLATFPRLARQTPMWDGPRGSNVLDGGCPYYDTYETKDKGR 245
Query: 231 FMAVGALESQFYAQLLAGLGMTEEE-------LPQHEVETG---RAKLTEKFKEKTQAEW 280
+ AVGALE QFY+ LL GLG+ EEE + + + E R KF+EKT++EW
Sbjct: 246 YFAVGALEPQFYSALLDGLGLREEEVFPLGSSMERQDKENWPYMRTVFARKFREKTRSEW 305
Query: 281 CEIFDNTDACVTPVLSLSQ 299
IFD TDAC TPVL++ +
Sbjct: 306 EAIFDGTDACATPVLTMDE 324
>gi|84495259|ref|ZP_00994378.1| putative fatty acid-CoA racemase [Janibacter sp. HTCC2649]
gi|84384752|gb|EAQ00632.1| putative fatty acid-CoA racemase [Janibacter sp. HTCC2649]
Length = 393
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/390 (43%), Positives = 230/390 (58%), Gaps = 20/390 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQDTVGYGKK--SLCINLK 59
L G+ V+E AG+ P+PF ++L E GA VIR+D+ A V T G G+ S+ ++LK
Sbjct: 13 LAGVKVVELAGIGPSPFAALLLAELGADVIRVDRPSVATDSVDLTGGLGRSRPSIAVDLK 72
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G V+ L Q+D+++E R GV E+L LGPD NP+L+Y R++G+GQ GP++S
Sbjct: 73 SDAGRDVVLRLVEQADILIEGMRPGVTERLGLGPDACLARNPQLVYGRMTGWGQSGPWAS 132
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINY LSG L L+G R P P NL ADFGGG + +GI+ AL R +GRGQ
Sbjct: 133 MAGHDINYAALSGALHLVGPAER-PMAPVNLLADFGGGTMYLLVGILAALQSRRSTGRGQ 191
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G+A L + + W RG NLLDGGA FYDTYE DG+F++VGA+E
Sbjct: 192 VVDAAMVDGAASLVTMMYAMYGAGSWRDERGVNLLDGGAPFYDTYECADGKFVSVGAIEP 251
Query: 240 QFYAQ--------LLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
QF+AQ LAG + P+H R + E+ + +T+ EW F+ TDACV
Sbjct: 252 QFFAQLLTGLGLEELAGQQYDTTQWPEH-----RRVIAERLRTRTRDEWAAAFEGTDACV 306
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLSL++A HPH RG F + AG P APR S TPG E APG TR
Sbjct: 307 APVLSLAEAPHHPHLQARGIFA-DVAGAAQPRVAPRFSETPGREPTPER--APGADTRTA 363
Query: 352 LRHFGYSDANIEELIREDVIEETIEMNSKL 381
L +G+ + +EELI + + ++ +L
Sbjct: 364 LAAWGWREGELEELITSGAVTQRSDIEHRL 393
>gi|359427448|ref|ZP_09218514.1| alpha-methylacyl-CoA racemase [Gordonia amarae NBRC 15530]
gi|358237266|dbj|GAB08096.1| alpha-methylacyl-CoA racemase [Gordonia amarae NBRC 15530]
Length = 369
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 205/336 (61%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L++ GA V+R+ + GA P D + G+K + +LK
Sbjct: 15 LHAIRVIEFAGIGPGPHAAMLLSDLGADVVRVQRPGALPKPGRPADALLRGRKVVEADLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L ++DV++E FR GVME+L GPD L + NP L+Y R++G+GQDGP +
Sbjct: 75 NPADRETVLGLIAKADVLIEGFRPGVMERLGFGPDDLAEVNPGLVYGRMTGWGQDGPRAD 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L +G P PP NL DFGGG + +G++ AL ER SGRGQ
Sbjct: 135 RAGHDINYISLTGLLHAVGRAGERPVPPLNLFGDFGGGSMFLVVGVLSALLERQVSGRGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G++ LG + + T +W RG N LD GA +YD YET DG++MAVGA+E
Sbjct: 195 VIDAAMVDGASLLGQMMWAFRGTGMWSDVRGVNFLDSGAPYYDVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GLG+ E+LP T R T+ F KT+ EW +FD TDACV+PVL
Sbjct: 255 QFYAELLKGLGLDGEDLPGQADLTRWPELRKIFTDTFAAKTRDEWTAVFDGTDACVSPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ +A PH R + + G+ APR SRT
Sbjct: 315 TFGEAPDEPHMAARANLV-EIDGIRQAQVAPRFSRT 349
>gi|398993091|ref|ZP_10696048.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM21]
gi|398135685|gb|EJM24794.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM21]
Length = 376
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/369 (42%), Positives = 220/369 (59%), Gaps = 10/369 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD--TVGYGKKSLCINLKK 60
L G+ V+E + PAPF M+L + GA VIR+D+ A D +G G++S+ I+ +K
Sbjct: 5 LAGVKVVEMNAIGPAPFAAMMLADMGAQVIRVDRQVAGFLNADGSLLGRGRRSIAIDPRK 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
V+ L + +DV++E FR GVME+L LGP+V + NP+LIY R++G+GQ GP +
Sbjct: 65 PGADEVLLKLIDGADVLIEGFRPGVMERLGLGPEVCLERNPKLIYGRMTGWGQSGPLAPA 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY+ LSG+L+ +G +R PTPP +L D GGG + GI+ ALFE KSG GQV
Sbjct: 125 AGHDLNYIALSGVLNAMGHADRPPTPPLHLVGDMGGGAMFLLTGILAALFEAQKSGLGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D + +G+ LGS + W R N+LDGGA FY Y DG+F+++GA+E Q
Sbjct: 185 VDAAICDGTTLLGSMYYDLRHQGQWGDQRQSNMLDGGAPFYGCYSCADGKFVSIGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY LL + + Q + R KL F +T+ W ++ + TDAC PVL
Sbjct: 245 FYQLLLELCEIDDPGFKQQWQQQAWPLLREKLEALFLTRTRDTWTQLLEGTDACFAPVLD 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
S+A +HPHN RG F+ AGV+ PAPAPRLSRTP + N G +T E+L G
Sbjct: 305 FSEAPTHPHNQGRGLFM-ETAGVLHPAPAPRLSRTPAQAGGLVRN---GENTLEILEQLG 360
Query: 357 YSDANIEEL 365
S A I+EL
Sbjct: 361 LSVAQIDEL 369
>gi|393718276|ref|ZP_10338203.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
echinoides ATCC 14820]
Length = 372
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 219/370 (59%), Gaps = 12/370 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L G+ +LE AG+ P PFCGM+L + GA VIR+++ GA + D + ++++ ++LK
Sbjct: 6 LAGLRILEMAGIGPGPFCGMMLADHGAEVIRVERPGASGLTEAARDPLLRSRRTITLDLK 65
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K + ++ ++ +A D ++E FR GVME+L LGP+ L NP+L+Y R++G+GQ GP ++
Sbjct: 66 KPEAIAAVRRIAATCDGLIEGFRPGVMERLGLGPEALLADNPKLVYGRMTGWGQTGPLAN 125
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
GHDI+Y+ +SG L LG R P P NL DFGGGG+M A G++ A+ +G GQ
Sbjct: 126 EPGHDIDYIAISGTLHALGEAGRKPVAPMNLVGDFGGGGMMLAFGMLAAILSAQATGLGQ 185
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+DC M EGSA L S + + W RG NLLDGGAHFYDTYET DG+++AVGA+E
Sbjct: 186 VVDCAMTEGSAVLTSMIWGFRAMGRWSGERGTNLLDGGAHFYDTYETADGKWIAVGAIEP 245
Query: 240 QFYAQLLAGLGMTEEELPQHEVET----GRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA L +G+ E +A L E+FK +T+ W F +AC+ PVL
Sbjct: 246 QFYAALRRVMGLDGAEWDAQFAPALWPKLKADLAERFKHRTRDAWIAAFAGHEACIAPVL 305
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+A +HPHNV RG+F+ GV PAPAPR S S A +L
Sbjct: 306 GFDEAVAHPHNVARGAFV-TTDGVTQPAPAPRYS----VSATVPPRMAGAPDGAAILAEA 360
Query: 356 GYSDANIEEL 365
G++ A I L
Sbjct: 361 GFTPAEIAAL 370
>gi|357402666|ref|YP_004914591.1| alpha-methylacyl-CoA racemase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386358743|ref|YP_006056989.1| fatty acid-CoA racemase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337769075|emb|CCB77788.1| Alpha-methylacyl-CoA racemase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365809251|gb|AEW97467.1| fatty acid-CoA racemase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 360
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 215/355 (60%), Gaps = 10/355 (2%)
Query: 8 VLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINLKKAKG 63
++E AG+ P PF GM+L + GA V+R+D+ G P +D K+S+ ++LK A G
Sbjct: 1 MVELAGIGPGPFAGMLLADLGADVVRVDRPGGAPIGIDPARDVTNRNKRSVVVDLKSAHG 60
Query: 64 LSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGH 123
++++LA ++DV++E FR GV E+L +GPD NPRL+Y R++G+GQ GP + AGH
Sbjct: 61 PGLVRDLAARADVLVEGFRPGVAERLGVGPDACLARNPRLVYGRMTGWGQHGPLADRAGH 120
Query: 124 DINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDC 183
DI YL +G L ++G + P PP NL D+ GG L +G++ AL +G GQV+D
Sbjct: 121 DIGYLATAGTLGMIGAADGPPVPPANLLGDYAGGSLYLVVGVLAALHHARATGTGQVVDA 180
Query: 184 NMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYA 243
+V+G+A+LG+ + W RG NLLDGG +Y Y T DG MAVGALE +FYA
Sbjct: 181 AIVDGAAHLGAMIWGMLAAGAWQDRRGANLLDGGCPYYGVYPTADGGHMAVGALEPRFYA 240
Query: 244 QLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
+ A LG+ ++ + ++ R ++ ++F +T+ EW +F+ TDACV PVL+L +A
Sbjct: 241 EFAALLGLGDDAPDRADLARWPELRERIADRFATRTREEWTRVFEGTDACVAPVLTLREA 300
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
HPH R +F G V PAPAPR S TPGT + +PG HT EV R +
Sbjct: 301 ADHPHLRARETFT-TADGTVQPAPAPRFSATPGT--LRRPPASPGAHTAEVARDW 352
>gi|226364000|ref|YP_002781782.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
gi|226242489|dbj|BAH52837.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
Length = 396
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/382 (42%), Positives = 234/382 (61%), Gaps = 13/382 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-------GKKSLC 55
L G+ V+E + P PFC M+L + GA VIR+D+ V + G++SL
Sbjct: 14 LSGLKVVEIGSIGPGPFCAMLLADLGADVIRVDRAAGAGLVGPNADFRAELLHRGRRSLA 73
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G V+ +L +DV++E FR GV E+L +GPD + NP LIY R++G+GQDG
Sbjct: 74 VDLKHPDGAEVVLSLVADADVLIEGFRPGVAERLGIGPDDCAERNPGLIYGRMTGFGQDG 133
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + GHDINY+ LSG LS++G + PTPP +L DFGGGG++ ALGIV ALFE+ +S
Sbjct: 134 PLAQHVGHDINYVALSGTLSMIGRQGEPPTPPLSLIGDFGGGGMLLALGIVSALFEKQRS 193
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQVID +MVEG+A L + T +W+ RG NL+D GA +YD YET DG+++AVG
Sbjct: 194 GLGQVIDASMVEGAALLATPFFGFAQTGVWNGERGTNLVDSGAPYYDAYETADGKWLAVG 253
Query: 236 ALESQFYAQLLAGLGMTEEELPQ-HEVETGRAK--LTEKFKEKTQAEWCEIFDNTDACVT 292
ALE FYA L+A L + ++ Q H + + K + + +T A+W + + CV
Sbjct: 254 ALEPHFYADLVALLDLPDDLPDQNHRSQWPQMKKIFADAVRGRTLADWLDAAEGLTPCVA 313
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL + +A +HPHNV RG+F+ G+V PAPAPR SRT + + PAPG HT E+L
Sbjct: 314 PVLDVDEAPAHPHNVARGTFV-EVDGLVQPAPAPRFSRT--AAAVDRRPPAPGEHTAEIL 370
Query: 353 RHFGYSDANIEELIREDVIEET 374
+G + + + +R + E
Sbjct: 371 TDWGIASGRVADWLRSGAVREA 392
>gi|433630245|ref|YP_007263873.1| Putative alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium canettii CIPT 140070010]
gi|432161838|emb|CCK59194.1| Putative alpha-methylacyl-CoA racemase Mcr (2-methylacyl-CoA
racemase) (2-arylpropionyl-CoA epimerase )
[Mycobacterium canettii CIPT 140070010]
Length = 360
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 151/334 (45%), Positives = 206/334 (61%), Gaps = 6/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-DTVGYGKKSLCINLKKA 61
L G+ V+E AG+ P P MIL + GA V+RID+ + + D + ++ + +LK
Sbjct: 5 LSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISGDAMLRNRRIVTADLKSD 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G + L ++DV++E +R GV E+L LGP+ K N RLIYAR++G+GQ GP S A
Sbjct: 65 QGRELALKLIAKADVLIEGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQA 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+GIL +G + P PP NL DFGGG + +GI+ AL+ER SG+GQV+
Sbjct: 125 GHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGSMFLLVGILAALWERQSSGKGQVV 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+GS+ L + + T +W RG N+LDGGA +YDTYE DGR++AVGA+E QF
Sbjct: 185 DAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA +LAGLG+ ELP RA LTE F + W +F N+DACVTPVL+
Sbjct: 245 YAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFARHDRDHWGAVFANSDACVTPVLAF 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH + R +F G P PAPR SRT
Sbjct: 305 GEVHNEPHIIERNTFYEANGG-WQPMPAPRFSRT 337
>gi|226361774|ref|YP_002779552.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus B4]
gi|226240259|dbj|BAH50607.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus B4]
Length = 365
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/342 (45%), Positives = 203/342 (59%), Gaps = 10/342 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQP---FVQDTVGYGKKSLCIN 57
L G+ V+E AG+ P P M+L + GA V+R+++ H P D G+ + +
Sbjct: 5 LNGLRVVELAGIGPGPHACMLLADLGAEVVRVERRTHTDAPGTTIDADATLRGRHIVEAD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + L +DV++E FR GV E+L LGPD NPRLIY R++G+GQ GP+
Sbjct: 65 LKNTADRDRILELIEHADVLVEGFRPGVTERLGLGPDDCQAVNPRLIYGRMTGWGQSGPF 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ L+GIL +G P PP NL DFGGG + +GI+ ALF R SGR
Sbjct: 125 ADRAGHDINYISLTGILDNIGRAGDRPVPPLNLVGDFGGGSMFLVVGILAALFARESSGR 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+G++ L + + W RGENLLDG FYDTYE DG+ +AVGA+
Sbjct: 185 GQVVDAAMVDGASVLAQMMWSLRSNRTWATGRGENLLDGSHPFYDTYECADGKHVAVGAI 244
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYAQLL GL + LP G RA+ FK +T+ EW ++F TDACVTP
Sbjct: 245 EPQFYAQLLDGLQLDATRLPGQWNRQGWAHLRAEFEIAFKSRTRDEWAQVFATTDACVTP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
VL+ +A HPH RG+F AGV PAPAPR S TP T+
Sbjct: 305 VLTYDEALQHPHMAARGTFA-TVAGVDQPAPAPRFSDTPTTT 345
>gi|393725338|ref|ZP_10345265.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
sp. PAMC 26605]
Length = 359
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 221/367 (60%), Gaps = 22/367 (5%)
Query: 11 FAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLKKAKGLSVM 67
AG+ P PFCGM+L + GA VIR+++ G V +D + ++++ ++LK+ + ++ +
Sbjct: 1 MAGIGPGPFCGMMLADHGAEVIRVERPGPPGMVDPMRDPLLRSRRTMSLDLKQPEAIAAV 60
Query: 68 KNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINY 127
+ LA D ++E FR GVME+L LGP+ L NP L+Y R++G+GQ GP + GHDI+Y
Sbjct: 61 RRLAATCDGLIEGFRPGVMERLGLGPETLLSDNPALVYGRMTGWGQTGPLAHEPGHDIDY 120
Query: 128 LGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVE 187
L +SG L LG R PT P NLAADFGGGG+M A G++ A+ + SG GQV+DC M E
Sbjct: 121 LAISGTLHALGEAGRKPTAPINLAADFGGGGMMLAFGMLAAILQAQVSGVGQVVDCAMTE 180
Query: 188 GSAYLGS--WLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQL 245
GSA L S W R Q +W RG NLLDGGA FYDTYET DG+++AVGA+E QFYA L
Sbjct: 181 GSAVLASMVWGFRAQG--MWSDARGTNLLDGGAPFYDTYETADGKWIAVGAIEPQFYAAL 238
Query: 246 -----LAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
L G + LP R +L ++FK +T+ EW F+ +AC+ PVL +A
Sbjct: 239 RRVMELDGAEWNAQFLPAVWPVLKR-ELVQRFKRRTRDEWVAAFEGHEACIAPVLGFDEA 297
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPR--LSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
+HPHN+ R +F+ GV PAPAPR +S T +H A +L G++
Sbjct: 298 IAHPHNLARAAFV-TAGGVTQPAPAPRYSVSETVSPRMAGDHEGA------AILAEAGFA 350
Query: 359 DANIEEL 365
A I L
Sbjct: 351 PAEIAAL 357
>gi|254419300|ref|ZP_05033024.1| CAIB/BAIF family [Brevundimonas sp. BAL3]
gi|196185477|gb|EDX80453.1| CAIB/BAIF family [Brevundimonas sp. BAL3]
Length = 373
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 211/351 (60%), Gaps = 17/351 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ--------DTVGYGKKSL 54
L G+ V+E AG+ P PFCGM+L + GA ++RID+ V D + G++S+
Sbjct: 7 LAGLRVVEMAGIGPTPFCGMLLADLGADIVRIDRENPSSPVAGAVRGSEFDFLRRGRRSV 66
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LKKA + +L +D ++E +R GVME+L LGPDV NP L+Y R++G+GQ
Sbjct: 67 TLDLKKAADVDACLDLFAGADAVIEGYRPGVMERLGLGPDVALGRNPALVYGRMTGWGQT 126
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP +S AGHDINY+ LSG L +G R+R PTPP NL DFGGG L A G++ AL
Sbjct: 127 GPLASAAGHDINYIALSGALHAIGDRDR-PTPPLNLVGDFGGGALYLAFGVLAALRHAHV 185
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
SG GQV+DC M +GSA L + + + W R N LDGGA FYDTY DG ++AV
Sbjct: 186 SGEGQVVDCAMSDGSASLMTAVYGMHASGAWSDQRRANPLDGGAPFYDTYRCLDGGWIAV 245
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDA 289
G+LE QFY +LL G+ E + + + RA L F +T+A+W E + D
Sbjct: 246 GSLEPQFYLKLLEACGIDLAEFGRRQWDRDAWPPLRAALEAAFSSRTRADWVEDLEGVDV 305
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEH 340
C PVLSLS+A+ HPHNV R F+ + GV PAPAPR S TPG +I H
Sbjct: 306 CFAPVLSLSEASRHPHNVARNVFV-DAGGVRQPAPAPRFSATPG--QIQSH 353
>gi|296171097|ref|ZP_06852550.1| alpha-methylacyl-CoA racemase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894353|gb|EFG74106.1| alpha-methylacyl-CoA racemase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 382
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 163/380 (42%), Positives = 223/380 (58%), Gaps = 15/380 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA--QPFVQD-TVGYGKKSLCINLK 59
L+G+ ++ GL P PFCGM+L + GA VIR+D A P D V G++SL ++K
Sbjct: 5 LRGVRIVMMGGLGPGPFCGMLLGDLGADVIRVDGLAAVDGPLPIDYPVRRGQRSLAADVK 64
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G ++ L +D ++ +R GV E+L +GPD LC+ NPRL+YAR++GYGQDGP +
Sbjct: 65 DPRGRDLVLRLVAAADAFVDVYRPGVAERLGIGPDELCERNPRLVYARMTGYGQDGPLAG 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G L +G +P PP NL D+GGGG++ A+G++ A+ E +SG GQ
Sbjct: 125 HAGHDINYIALTGALHGIG-TAESPVPPLNLVGDYGGGGMLLAVGLLSAILEARESGTGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G A L + W R +NLLDG AHFY Y T DG AVGA+E
Sbjct: 184 VLDVAMVDGVATLLAPYFGMVPAGTWRDRRHDNLLDGAAHFYGVYATADGGHFAVGAMEP 243
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FYA+L LG+ ++P + G RA L +F EKT+ EW I C TPV
Sbjct: 244 KFYAELCERLGV---DVPHDDDAPGNWAAHRATLAARFAEKTRDEWERILAAPGCCATPV 300
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL++A HPH R +F+ GV PAPAPR SRT + PG HTR VLR
Sbjct: 301 LSLTEAPGHPHLAARRTFV-EVDGVPQPAPAPRFSRT--RPQPPTAPSLPGDHTRAVLRE 357
Query: 355 FGYSDANIEELIREDVIEET 374
G I EL++ V+ ++
Sbjct: 358 LGMDARGISELVQAGVVAQS 377
>gi|398866047|ref|ZP_10621550.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
gi|398241946|gb|EJN27582.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
Length = 375
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/370 (42%), Positives = 223/370 (60%), Gaps = 13/370 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD--TVGYGKKSLCINLKK 60
L G+ V+E + PAPF M+L + GA VIR+D+ + D + G++SL I+ +K
Sbjct: 5 LAGVKVVEMNAIGPAPFATMLLADMGAEVIRVDRLVSGFLNGDGSVISRGRRSLAIDPRK 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ V+ L +DV++E FR GVME+L LGP+ + NPRL+Y R++G+GQ GP +S+
Sbjct: 65 PGSIDVLLQLIEGADVLIEGFRPGVMERLGLGPEPCLQRNPRLVYGRMTGWGQTGPLASV 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NYL ++G L +G +R PTPP +LA D GGG + A GIV AL E KSG+GQV
Sbjct: 125 AGHDLNYLAITGALHAMGHADREPTPPLHLAGDMGGGAMFLAFGIVSALLEAQKSGKGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D + +G+A L + + + W + RGEN+ DGGA FY Y G F+++G++E Q
Sbjct: 185 VDAAISDGAALLSTMYYEFKQSGEW-RGRGENIFDGGAPFYGCYACAGGGFVSIGSIEPQ 243
Query: 241 FYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY +LL L E+ Q + + R+KL F +T+ +WCE+ D TD C PVL
Sbjct: 244 FY-RLLMQLCQIEDPAFQSQWDRRQWPALRSKLEAMFLTRTRDQWCELLDGTDVCFAPVL 302
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
++A HPH+ R +FI GV PAPAPRLSRTP T+ N G HT ++LR
Sbjct: 303 DFNEALEHPHHQARKTFI-QTDGVTHPAPAPRLSRTPATAGSVVKN---GEHTLDILREL 358
Query: 356 GYSDANIEEL 365
G DA I L
Sbjct: 359 GLDDARIGAL 368
>gi|316936138|ref|YP_004111120.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris DX-1]
gi|315603852|gb|ADU46387.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris DX-1]
Length = 371
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 223/360 (61%), Gaps = 17/360 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA VI + + G +P Q G+ + ++LK
Sbjct: 21 LSGTRIVEFAGIGPGPFGSMLLADMGAEVITLVRAGQKP--QGAAARGRTVVTVDLKDKA 78
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + NL + +D ++E +R GVME+L LGPDV+ NP+L+YAR++G+GQ GP + AG
Sbjct: 79 SVAEVLNLLDGADALIEGYRPGVMERLGLGPDVVMARNPKLVYARMTGWGQTGPLAQAAG 138
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G ++ P PP NL DFGGG L +GI+ AL E SKSG+GQV+D
Sbjct: 139 HDINYISITGALAAIGPADK-PVPPLNLVGDFGGGSLYLVVGILAALLEASKSGKGQVVD 197
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N+LDGGAHFY TY DG+F+++G++E QFY
Sbjct: 198 AAMCDGAASLITMFFDMTAAGRWKEGRESNMLDGGAHFYGTYACADGQFISIGSIEPQFY 257
Query: 243 AQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+T + ++ + + KL FK K++ EWC++ + TD C PVL++S
Sbjct: 258 ALLRQIAGLTDADYDAQMDARQWPALKQKLAAVFKTKSRDEWCKLMEGTDVCFAPVLTMS 317
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR--EVLRHFG 356
+AT HPH V R FI N G PAPAPR SRTP ++ P VH++ +V++ +G
Sbjct: 318 EATKHPHMVAREVFI-NHEGHTQPAPAPRFSRTPSAAR-------PPVHSQIGDVVKAWG 369
>gi|427817805|ref|ZP_18984868.1| putative racemase [Bordetella bronchiseptica D445]
gi|410568805|emb|CCN16871.1| putative racemase [Bordetella bronchiseptica D445]
Length = 403
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 154/372 (41%), Positives = 221/372 (59%), Gaps = 13/372 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L G+ V+E A + P PFCGM+L + GA V+R+D+ A + G GK+S+ +
Sbjct: 24 LHGLKVIEVAAMGPVPFCGMLLADLGAEVLRVDRTADAGLGIALDPRFELRGRGKQSVAM 83
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK GL+ L ++DV+LE FR GV E+L +GP P L+Y R +G+G+ GP
Sbjct: 84 DLKHPDGLAAFLRLVARADVLLEGFRPGVAERLGIGPRTCLSLRPSLVYGRATGWGRSGP 143
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S AGHDINYL L+G L ++G + P PP NL D+GGG L A G+V A E ++SG
Sbjct: 144 MSQAAGHDINYLALTGALDMIGPADGAPVPPLNLVGDYGGGALYLAFGVVSAALEAARSG 203
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D M++G + L + + + + RG N+LDGGA +Y TY T DGR MAVGA
Sbjct: 204 VGQVVDAAMIDGVSSLLTVFHGFRQAGMLNPERGANVLDGGAPYYTTYATLDGRHMAVGA 263
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F+A LL+ LG+ + ELP + R + +F ++T+ +W F + DACV+
Sbjct: 264 IEPKFFAVLLSELGLDQRELPAQQDRARWPQLRQAIAARFAQRTRDDWAAHFQDKDACVS 323
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL+L +A+ H HN R + + G+ PAPAPR SRTP + I + APG HT + L
Sbjct: 324 PVLALHEASRHAHNQARAQMV-DVDGIEHPAPAPRFSRTP--ASIRGNATAPGAHTVQAL 380
Query: 353 RHFGYSDANIEE 364
+G+ A IE
Sbjct: 381 ESWGFDAAEIER 392
>gi|241763356|ref|ZP_04761412.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
delafieldii 2AN]
gi|241367508|gb|EER61807.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
delafieldii 2AN]
Length = 386
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 218/357 (61%), Gaps = 13/357 (3%)
Query: 19 FCGMILNEFGATVIRID-KHGAQPFVQ-----DTVGYGKKSLCINLKKAKGLSVMKNLAN 72
FC M+L + GA V+RID KH ++ + D + G++SL ++LKK + + +K +
Sbjct: 27 FCAMLLADMGAEVVRIDRKHASESGLPVDRRFDVMFRGRRSLALDLKKPEAVDAVKRMLR 86
Query: 73 QSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSG 132
+DV++E FR GVME+L LGP+V + NPRLIY R++G+GQ GP + AGHDINY+ LSG
Sbjct: 87 GADVLIEGFRPGVMERLGLGPEVCLELNPRLIYGRMTGWGQTGPLAREAGHDINYIALSG 146
Query: 133 ILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYL 192
+L +G + P P NL DFGGG + A GI+ AL E SGRGQV+D MV+GS L
Sbjct: 147 VLHAIGRKGGPPEIPLNLIGDFGGGAMYLAFGIMCALHEAKSSGRGQVVDAAMVDGSTSL 206
Query: 193 GSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMT 252
+ + W RG N LD GA +YD YETKDGR++AVG E+ F+ L LG+
Sbjct: 207 MAMVYGLFAAGYWKDERGSNRLDSGAPWYDVYETKDGRYVAVGCTEASFFRNTLRLLGLR 266
Query: 253 EEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVH 308
EE+ G K+ E F+ +T+ EWC +F+ T+ C +PVLSL++A HPH V
Sbjct: 267 EEDFGGQHDRDGWPKMKEAFARVFRSRTRDEWCAVFEGTETCFSPVLSLAEAPHHPHQVA 326
Query: 309 RGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
RG+F+ +GVV PAPAPR SR+ + P G HT EVL+ +G+ ++ L
Sbjct: 327 RGNFV-ECSGVVQPAPAPRFSRS--RPAVQGPPPQAGEHTMEVLKDWGFGPEDVALL 380
>gi|39937727|ref|NP_950003.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris CGA009]
gi|39651587|emb|CAE30109.1| putative racemase [Rhodopseudomonas palustris CGA009]
Length = 371
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 227/360 (63%), Gaps = 17/360 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L++ GA VI + + G +P Q G+ + ++LK
Sbjct: 21 LAGTRIVEFAGIGPGPFGSMLLSDMGAEVITLVRAGQKP--QGAAARGRTVVTVDLKDKA 78
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + NL + +D ++E +R GVME+L LGP+++ NP+L+YAR++G+GQ GP + AG
Sbjct: 79 SVAEVLNLLDGADALVEGYRPGVMERLGLGPELVMARNPKLVYARMTGWGQTGPLAQAAG 138
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + R P PP NL DFGGG L +GI+ AL E SKSG+GQV+D
Sbjct: 139 HDINYISITGALAAIGPKER-PVPPLNLVGDFGGGSLYLVVGILAALLEASKSGKGQVVD 197
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N+LDGGAHFY TYE DG+F+++G++E QFY
Sbjct: 198 AAMCDGAASLITMFFDMTAAGRWKEGRESNMLDGGAHFYGTYECADGQFVSIGSIEPQFY 257
Query: 243 AQLLAGLGMTEEEL-PQHEVETGRA---KLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+T+ + Q +++ A KL FK KT+ EWC++ + TD C PVL++S
Sbjct: 258 ALLRQIAGLTDTDYDAQMDIKQWPALKQKLAAVFKTKTRDEWCKLMEGTDVCFAPVLTMS 317
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR--EVLRHFG 356
+A HPH V R +FI + G PAPAPR SRTP ++ P VH++ +V++ +G
Sbjct: 318 EAAKHPHMVAREAFITHE-GHTQPAPAPRFSRTPSAAR-------PPVHSQIGDVVKAWG 369
>gi|452951816|gb|EME57258.1| alpha-methylacyl-CoA racemase [Rhodococcus ruber BKS 20-38]
Length = 365
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 207/334 (61%), Gaps = 7/334 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV--QDTVGYGKKSLCINLKK 60
L GI V+EFAGL P P +L + GA V+ + + G P +D + G++ + +LK
Sbjct: 12 LAGIRVVEFAGLGPGPHAATLLADLGADVVCVQRPGLIPPAGHRDQIQRGRRVVEADLKN 71
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ + + L ++DV++E FR GV E++ LGPDV NPRL+Y R++G+GQ+GP +
Sbjct: 72 PEQVEKVLGLIERADVLIEGFRPGVTERMGLGPDVALARNPRLVYGRMTGWGQEGPLAHA 131
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQV
Sbjct: 132 AGHDINYISLTGVLHAIGRKGERPVPPLNMVGDFGGGSMFLIFGILSALVERQSSGKGQV 191
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+G+ L + + +W RG NLLD GA FYD YET DG++MAVG++E Q
Sbjct: 192 VDAAMVDGALALSHMMWAFRGRGVWSDERGVNLLDTGAPFYDVYETADGKYMAVGSIEPQ 251
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL GL + ELPQ + ++ TEKF KT+ EW IFD TDACV+PVL+
Sbjct: 252 FYALLLQGLELDPAELPQQLDTSAWPQMKKLFTEKFLSKTRDEWAAIFDGTDACVSPVLT 311
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
+A ++PH RG+ I GV APAPR SR
Sbjct: 312 FGEAPANPHIAARGALI-ELDGVTQHAPAPRFSR 344
>gi|355668132|gb|AER94091.1| alpha-methylacyl-CoA racemase [Mustela putorius furo]
Length = 253
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 145/255 (56%), Positives = 183/255 (71%), Gaps = 7/255 (2%)
Query: 107 RLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIV 166
RLSG+GQ G +S MAGHDINYL LSG+LS +G NP PP NL ADFGGGGLMC LGI+
Sbjct: 1 RLSGFGQSGRFSRMAGHDINYLALSGVLSKIGRSGENPFPPLNLLADFGGGGLMCTLGIL 60
Query: 167 MALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYET 226
+ALFER++SG+GQVID +MVEGSAYL S+L ++Q T LW++P+G+NLLDGGA FY TY+T
Sbjct: 61 LALFERTRSGKGQVIDVSMVEGSAYLSSFLWKSQKTGLWEQPQGQNLLDGGAPFYTTYKT 120
Query: 227 KDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWC 281
DG FMAVGALE QFY L+ GLG+ ++LP H++ + + + F +K +AEWC
Sbjct: 121 ADGGFMAVGALEPQFYKLLIKGLGLKSDDLP-HQMSMSDWPEMKKRFADIFAKKKKAEWC 179
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
+IFD TDACVTPVL+ + H HN RGSF+ + V+P PAP LS TP + +
Sbjct: 180 QIFDGTDACVTPVLTFEEVAHHHHNKERGSFLTDEEQGVSPRPAPLLSDTPAVPS-SRRD 238
Query: 342 PAPGVHTREVLRHFG 356
P G HT E+LR FG
Sbjct: 239 PFVGEHTEEILREFG 253
>gi|91780348|ref|YP_555555.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
gi|91693008|gb|ABE36205.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
Length = 384
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/378 (43%), Positives = 232/378 (61%), Gaps = 18/378 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---------DTVGYGKKS 53
L G+ V+E G+ P PFC M+L + GA VIR+D+ P D ++S
Sbjct: 5 LAGVKVVEMVGIGPGPFCAMMLADMGAEVIRVDQPRRGPLPDPYSALNTRYDVQARNRRS 64
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+ +NLK+ +G++ + +L +D ++E FR GVME+L LGP+ + NPRL+Y R++G+GQ
Sbjct: 65 IAVNLKRPEGVATVLSLIAHADALIEGFRPGVMERLGLGPETCVEQNPRLVYGRMTGWGQ 124
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
DGP + +AGHDINY+ L+G+L+ LG + P PP NL D GGGG++ A G+V AL E
Sbjct: 125 DGPLAQVAGHDINYIALTGVLAALGDPHHPPAPPLNLVGDLGGGGMLLAFGLVCALLEAR 184
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
SG+GQV+D M +GSA L S + W RG NLLDGGA FY ++ DGR +A
Sbjct: 185 CSGKGQVVDAAMTDGSALLMSMFYGLRAAGQWQDQRGTNLLDGGAPFYGSFACADGRHVA 244
Query: 234 VGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTD 288
+G LE FY QLL G+++ L Q ++E RA L E F+ +T+ +WC++ + TD
Sbjct: 245 IGPLEPAFYKQLLDLCGVSDPAL-QVQMEPAQWPQLRATLAEVFRTRTRDDWCKLLEGTD 303
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
AC PVL + +A HPHNV R +FI GV+ PAPAPR SRTP T + P+ G H+
Sbjct: 304 ACFAPVLQMEEAPRHPHNVARKTFI-EVDGVIQPAPAPRFSRTPST--MPTRPPSVGEHS 360
Query: 349 REVLRHFGYSDANIEELI 366
RE+LR +G S ++ L
Sbjct: 361 REILRDWGLSADAVDALF 378
>gi|392941460|ref|ZP_10307102.1| putative acyl-CoA transferase/carnitine dehydratase [Frankia sp.
QA3]
gi|392284754|gb|EIV90778.1| putative acyl-CoA transferase/carnitine dehydratase [Frankia sp.
QA3]
Length = 375
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH---GAQPFVQDTVGYGKKSLCINLK 59
L G+ V+E AG+ PAPF +L E GA VIR+DK G QP D + G+ S+ ++LK
Sbjct: 16 LHGVRVIELAGIGPAPFAATLLTELGADVIRVDKPATVGTQP---DWLTRGRPSVALDLK 72
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + + L + + V +E +R GV E+L LGPD L NP L+Y R++G+GQ+GP+S
Sbjct: 73 NPEDHAGLLELLDAAHVFIEGYRPGVTERLGLGPDELLARNPALVYGRMTGWGQEGPWSR 132
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ ++G L +G P P NL DFGGG L +GI+ AL E SGRGQ
Sbjct: 133 TAGHDINYVAITGALGAIGRAGGPPQVPLNLVGDFGGGALYLVVGILAALHEARDSGRGQ 192
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+DC +V+G A L + + W +PRG N+LD G +YD YET DG + +VG +E+
Sbjct: 193 VVDCAIVDGVASLSAMMWSMISRKEWGEPRGTNMLDTGRPWYDVYETSDGGWFSVGPIEA 252
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
QFYA+L+ LG+ E Q++ RA F +T+AEW ++FD TDAC PVLS
Sbjct: 253 QFYAKLVELLGLPEWADAQNDASRWPQMRAAFATAFASRTRAEWEQVFDGTDACAAPVLS 312
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
S+A +HPH R F+ + VAPAPAPR SRTPG ++ PA G T +R
Sbjct: 313 WSEARAHPHLAAREVFV-DLGDEVAPAPAPRFSRTPG--RVAGMGPAVGSSTLAQVRQ 367
>gi|85099873|ref|XP_960861.1| alpha-methylacyl-CoA racemase [Neurospora crassa OR74A]
gi|28922390|gb|EAA31625.1| alpha-methylacyl-CoA racemase [Neurospora crassa OR74A]
gi|28950366|emb|CAD71021.1| probable alpha-methylacyl-coa racemase [Neurospora crassa]
Length = 400
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 210/303 (69%), Gaps = 10/303 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF---VQDTVGYGKKSLCINLK 59
L G+ VLEFAGLAP PF G++L + GA+V+RID+ + P V D + K SL ++LK
Sbjct: 7 LTGLKVLEFAGLAPGPFAGLLLADAGASVLRIDRAVSGPVARQVPDQLTRHKSSLVVDLK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLC--KSNPRLIYARLSGYGQDGPY 117
G++++K+LA SDV+++P+R GV+EKL LGP VLC + NPRLIYARL+G+ +DG +
Sbjct: 67 SPSGIALIKSLAAVSDVLIDPYRPGVLEKLGLGPSVLCSDECNPRLIYARLTGFRRDGRF 126
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
++MAGHDINYL +SG+LSLLG + PTPP N+ DF GGG + GI++AL R ++G+
Sbjct: 127 ATMAGHDINYLAVSGVLSLLGRKGEKPTPPINILGDFAGGGAVLFQGILLALAARERTGK 186
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV++ N+V+G++YL ++ T + + PRGENLLD G +YDTYET DG+++AVGAL
Sbjct: 187 GQVVEANIVDGASYLATFNRFALKTAVGNAPRGENLLDTGCPYYDTYETADGKYIAVGAL 246
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QF+ +L+ GLG+ + + + R L KFK KT+ EW +IFD TDAC T
Sbjct: 247 EPQFFKELVKGLGLEGQGWEERRGDKENWPELRRVLEHKFKTKTRREWEDIFDGTDACCT 306
Query: 293 PVL 295
V
Sbjct: 307 AVF 309
>gi|374991408|ref|YP_004966903.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
bingchenggensis BCW-1]
gi|297162060|gb|ADI11772.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
bingchenggensis BCW-1]
Length = 401
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 173/373 (46%), Positives = 239/373 (64%), Gaps = 12/373 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQ---DTVGYGKKSLCINL 58
L G+ VLE A +AP PF +L + GA V+RID+ P D + G++SL ++L
Sbjct: 17 LAGLRVLEIASMAPGPFACTVLADLGAEVLRIDRASDVDPDTHSSTDPLARGRRSLAVDL 76
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++++ LA ++DV++E FR GV E+L +GP+ NPRL+Y R++G+GQ GP +
Sbjct: 77 KHPEGAALVRRLAARADVLVEGFRPGVAERLGIGPEDCRAVNPRLVYGRMTGWGQSGPLA 136
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI YL +SG L L+G +R P PP NL DFGGGG++ A+GI+ AL+ER +SG+G
Sbjct: 137 PRAGHDITYLAVSGALGLIGPPDRPPVPPVNLVGDFGGGGMLLAMGILAALYERERSGQG 196
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+G+A L + L + W+ RGENLLDGGA FY TYET DG +MA+G LE
Sbjct: 197 QVVDAAMVDGAALLTTALHGLRAAAHWEGGRGENLLDGGAPFYTTYETADGGYMAIGPLE 256
Query: 239 SQFYAQLLAGLGMTEE-ELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+FYAQLL GLG+ ++ +LP Q++ E R +L FKE+T+ EW +F+ TDACV P
Sbjct: 257 ERFYAQLLTGLGLADDPDLPAQYDRERWPELRQRLAAAFKERTRDEWTAVFEPTDACVAP 316
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLS +A HPHN R F GV PAPAPR RTPG ++ P G TR L+
Sbjct: 317 VLSPWEAHHHPHNAARSVFT-ETGGVRQPAPAPRFDRTPG--EVQGPPPVVGQDTRIALK 373
Query: 354 HFGYSDANIEELI 366
+G + + L+
Sbjct: 374 DWGVDVLDADRLL 386
>gi|327294819|ref|XP_003232105.1| isopenicillin N-CoA epimerase [Trichophyton rubrum CBS 118892]
gi|326466050|gb|EGD91503.1| isopenicillin N-CoA epimerase [Trichophyton rubrum CBS 118892]
Length = 399
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 152/318 (47%), Positives = 212/318 (66%), Gaps = 21/318 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---------HGAQPFVQDTVGYGKKS 53
L+GI V+E AGLAP PF G++L+++GA+V+RID+ P D + K+S
Sbjct: 8 LQGIRVVELAGLAPGPFAGLMLSDYGASVVRIDRPHPNAHSQSKPVPPPTFDALTRHKRS 67
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYG 112
+ ++LK +V+ +L +++DV+++P+R GV+EKL L P VL K NPRLI AR++G+
Sbjct: 68 ISLDLKNPASKAVLLSLLSKADVLIDPYRPGVLEKLGLCPTTVLLKHNPRLIIARMTGFR 127
Query: 113 QDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
+DG Y MAGHDINY+ +SG LSLLG + P P N+ DF GGG +C GI++AL R
Sbjct: 128 RDGKYKDMAGHDINYIAVSGALSLLGREGQKPYAPGNILGDFAGGGAVCFQGILLALLAR 187
Query: 173 SKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRF 231
+GRGQV++ NMV+GSAYL ++ + T +WD PRG N+LDGG +YDTYETKD GR+
Sbjct: 188 QATGRGQVVNANMVDGSAYLATFPRLARQTPMWDGPRGSNVLDGGCPYYDTYETKDKGRY 247
Query: 232 MAVGALESQFYAQLLAGLGMTEEE-------LPQHEVETG---RAKLTEKFKEKTQAEWC 281
AVGALE QFY+ LL LG+ EEE + + + E RA KF+E+T++EW
Sbjct: 248 FAVGALEPQFYSALLDRLGLREEEVFPLGSSMDRQDKENWPYMRAVFARKFRERTRSEWE 307
Query: 282 EIFDNTDACVTPVLSLSQ 299
IFD TDAC TPVL++ +
Sbjct: 308 AIFDGTDACATPVLTMDE 325
>gi|254282339|ref|ZP_04957307.1| alpha-methylacyl-CoA racemase [gamma proteobacterium NOR51-B]
gi|219678542|gb|EED34891.1| alpha-methylacyl-CoA racemase [gamma proteobacterium NOR51-B]
Length = 380
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 171/384 (44%), Positives = 233/384 (60%), Gaps = 15/384 (3%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTV-GYGKKSLCINLKK 60
AL G ++E AG+ PAP M+L + GA VIR+++ G D V GKKS+ +NLK
Sbjct: 3 ALSGFRIIELAGIGPAPMGCMMLADMGAEVIRVERPGGNALYLDPVSARGKKSVSLNLKA 62
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G+ L + +DV++E +R GV EKL +GPD K NP+L+YAR++G+GQ+GP +
Sbjct: 63 KAGVDAFLQLVDSADVLVEAYRPGVAEKLGVGPDACRKRNPKLVYARMTGWGQEGPLAQT 122
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
GHDINY+ L+G L +G R P PP NL D GGGG++ G++ AL E SG GQV
Sbjct: 123 PGHDINYIALTGALHAVGRRGEKPVPPLNLVGDMGGGGMLLVNGVLAALLEAQGSGEGQV 182
Query: 181 IDCNMVEGSAYLGSWLTR-TQDTFLWDKP-RGENLLDGGAHFYDTYETKDGRFMAVGALE 238
+D M++G+A L W+T+ Q WD RG NLLDG AHFYDTYET DG+++ VGA+E
Sbjct: 183 LDVAMIDGTAQL-MWMTQGMQQIGAWDDTERGVNLLDGCAHFYDTYETADGKYICVGAIE 241
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTP 293
SQFYA+L+ L + EL + + ++ R +L E F KT+ +WCEI + ++AC +P
Sbjct: 242 SQFYAKLVE-LAGVDPELFKDQHDSARWPELTERLAEVFLSKTRDQWCEIMEGSEACFSP 300
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP-GVHTREVL 352
VL+LS+A HP N R S+I G+ APAPR SRTP K H P G T VL
Sbjct: 301 VLTLSEAPDHPANRMRSSYI-QVDGITQHAPAPRFSRTPSEVK---HGVRPAGADTTAVL 356
Query: 353 RHFGYSDANIEELIREDVIEETIE 376
G S +I +I V +T E
Sbjct: 357 AAAGVSSNDIAGMIDAGVAAQTNE 380
>gi|410418332|ref|YP_006898781.1| racemase [Bordetella bronchiseptica MO149]
gi|408445627|emb|CCJ57287.1| putative racemase [Bordetella bronchiseptica MO149]
Length = 403
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 154/372 (41%), Positives = 220/372 (59%), Gaps = 13/372 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L G+ V+E A + P PFCGM+L + GA V+R+D+ A + G GK+S+ +
Sbjct: 24 LHGLKVIEVAAMGPVPFCGMLLADLGAEVLRVDRTADAGLGIALDPRFELRGRGKQSVAM 83
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK GL+ L ++DV+LE FR GV E+L +GP P L+Y R +G+G+ GP
Sbjct: 84 DLKHPDGLAAFLRLVARADVLLEGFRPGVAERLGIGPRACLSLRPSLVYGRATGWGRSGP 143
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S AGHDINYL L+G L ++G P PP NL D+GGG L A G+V A E ++SG
Sbjct: 144 MSQAAGHDINYLALTGALDMIGPAGGAPVPPLNLVGDYGGGALYLAFGVVSAALEAARSG 203
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D M++G + L + + + + RG N+LDGGA +Y TY T DGR MAVGA
Sbjct: 204 VGQVVDAAMIDGVSSLLTVFHGFRQAGMLNPERGANVLDGGAPYYTTYATLDGRHMAVGA 263
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F+A LL+ LG+ + ELP + R + +F ++T+ +W F + DACV+
Sbjct: 264 IEPKFFAVLLSELGLDQRELPAQQDRARWPQLRQAIAARFAQRTRDDWAAHFQDKDACVS 323
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL+L +A+ H HN R + + G+ PAPAPR SRTP + I + APG HT + L
Sbjct: 324 PVLALHEASRHAHNQARAQMV-DVDGIEHPAPAPRFSRTP--ASIRGNAAAPGAHTVQAL 380
Query: 353 RHFGYSDANIEE 364
+G+ A IE
Sbjct: 381 ESWGFDAAEIER 392
>gi|302541373|ref|ZP_07293715.1| putative alpha-methylacyl-CoA racemase [Streptomyces hygroscopicus
ATCC 53653]
gi|302458991|gb|EFL22084.1| putative alpha-methylacyl-CoA racemase [Streptomyces himastatinicus
ATCC 53653]
Length = 390
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 217/363 (59%), Gaps = 13/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-----DTVGYGKKSLCIN 57
L G+ V+E AG+ P PF M+L + GA V+R+D+ ++ D K+S+ ++
Sbjct: 16 LAGVRVVELAGIGPGPFAAMLLGDLGADVVRVDRPERPGGLKVDPAYDLANRNKRSVLLD 75
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +GL L ++D+++E +R GV E+L LGPD + NPRL+Y R++G+GQDGP
Sbjct: 76 LKSERGLDAALGLIERADILIEGYRPGVAERLGLGPDTCLERNPRLVYGRMTGWGQDGPL 135
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
S+ AGHDI Y+ ++G L + G + P P NL D+ GG L +G++ AL G
Sbjct: 136 SATAGHDIGYIAITGALGMTGEADGPPVAPANLLGDYAGGSLYLVIGVLAALQHARSGGT 195
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + L W RG NLLDGG FY TYET DG MAVGAL
Sbjct: 196 GQVVDAAIVDGTAHLTAVLHGMMAAGGWQDRRGSNLLDGGCPFYGTYETADGGHMAVGAL 255
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E FYA+ + LG+ ++ + ++++ R + +FKE+T+ EW +F +DACV PV
Sbjct: 256 EPAFYAEFIDLLGIADQAPARKDIDSWDRLRTVIAARFKERTREEWTAVFAGSDACVAPV 315
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL +A HP RG+F+ + AG+ PAPAPR S TPG + PA PG H EV R
Sbjct: 316 LSLREAPRHPQLAARGTFV-DEAGITQPAPAPRFSATPGRVR---GGPARPGAHAAEVAR 371
Query: 354 HFG 356
+G
Sbjct: 372 DWG 374
>gi|379755780|ref|YP_005344452.1| alpha-methylacyl-CoA racemase [Mycobacterium intracellulare
MOTT-02]
gi|379763328|ref|YP_005349725.1| alpha-methylacyl-CoA racemase [Mycobacterium intracellulare
MOTT-64]
gi|406032037|ref|YP_006730929.1| alpha-methylacyl-CoA racemase [Mycobacterium indicus pranii MTCC
9506]
gi|378805996|gb|AFC50131.1| alpha-methylacyl-CoA racemase [Mycobacterium intracellulare
MOTT-02]
gi|378811270|gb|AFC55404.1| alpha-methylacyl-CoA racemase [Mycobacterium intracellulare
MOTT-64]
gi|405130584|gb|AFS15839.1| Alpha-methylacyl-CoA racemase [Mycobacterium indicus pranii MTCC
9506]
Length = 381
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 228/381 (59%), Gaps = 17/381 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA--QPFVQD-TVGYGKKSLCINLK 59
L+G+ ++ GL PAPFCGM+L + GA ++RID P D TV G++SL ++K
Sbjct: 5 LRGVRIVMMGGLGPAPFCGMLLGDLGADIVRIDAVAGVDAPLPIDYTVRRGQRSLAADVK 64
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G ++ LA +D ++ +R GV E+L +GPD L + NPRL+YAR++GYGQDGP +
Sbjct: 65 DPRGRDLVHRLAAGADAFVDVYRPGVAERLGIGPDALTERNPRLVYARMTGYGQDGPLAG 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL L+G L +G +P PP NL D+GGGG++ A+G++ A+ E +SG GQ
Sbjct: 125 HAGHDINYLALTGALHAIGT-AESPVPPLNLIGDYGGGGMLLAVGLLSAILEARESGVGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G A L + W R NLLDGGAHFY Y T DG +AVGA+ES
Sbjct: 184 VLDVAMVDGVATLLAPYFGMLPAGTWRDEREANLLDGGAHFYGVYATADGGHVAVGAMES 243
Query: 240 QFYAQLLAGLGMTEEELPQ-----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FYA+L LG+T +PQ RA L +F EK + EW I D C TPV
Sbjct: 244 KFYAELCDRLGVT---VPQDDDAPAAWAAHRAALAARFAEKPRDEWERILDTPGCCATPV 300
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL++A HPH+V R +F+ G+ PAPAPR SR T T PA PG HT+ +LR
Sbjct: 301 LSLTEAPRHPHHVARRTFV-ELDGITQPAPAPRFSR---TRPATPSAPALPGDHTQALLR 356
Query: 354 HFGYSDANIEELIREDVIEET 374
G I EL+ V+ ++
Sbjct: 357 EAGLDAQTIAELVDSGVVAQS 377
>gi|192293508|ref|YP_001994113.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris TIE-1]
gi|192287257|gb|ACF03638.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris TIE-1]
Length = 371
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 226/360 (62%), Gaps = 17/360 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA VI + + G +P Q G+ + ++LK
Sbjct: 21 LAGTRIVEFAGIGPGPFGSMLLADMGAEVITLVRAGQKP--QGAAARGRTVVTVDLKDKA 78
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + NL + +D ++E +R GVME+L LGP+++ NP+L+YAR++G+GQ GP + AG
Sbjct: 79 SVAEVLNLLDGADALVEGYRPGVMERLGLGPELVMARNPKLVYARMTGWGQTGPLAQAAG 138
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + R P PP NL DFGGG L +GI+ AL E SKSG+GQV+D
Sbjct: 139 HDINYISITGALAAIGPKER-PVPPLNLVGDFGGGSLYLVVGILAALLEASKSGKGQVVD 197
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N+LDGGAHFY TYE DG+F+++G++E QFY
Sbjct: 198 AAMCDGAASLITMFFDMTAAGRWKEGRESNMLDGGAHFYGTYECADGQFVSIGSIEPQFY 257
Query: 243 AQLLAGLGMTEEEL-PQHEVETGRA---KLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+T+ + Q +++ A KL FK KT+ EWC++ + TD C PVL++S
Sbjct: 258 ALLRQIAGLTDADYDAQMDIKQWPALKQKLAAVFKTKTRDEWCKLMEGTDVCFAPVLTMS 317
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR--EVLRHFG 356
+A HPH V R +FI + G PAPAPR SRTP ++ P VH++ +V++ +G
Sbjct: 318 EAAKHPHMVAREAFITHE-GHTQPAPAPRFSRTPSAAR-------PPVHSQIGDVVKAWG 369
>gi|221070107|ref|ZP_03546212.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni KF-1]
gi|220715130|gb|EED70498.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni KF-1]
Length = 396
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/377 (40%), Positives = 222/377 (58%), Gaps = 12/377 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY----GKKSLCINL 58
L+G+ V+E AGLAP PF M+L + GA V+RID+ P Y ++S+ ++L
Sbjct: 23 LQGLKVIEMAGLAPGPFAAMMLADMGAQVLRIDRPDPAPRAMPQRFYFTDRNRRSIAVDL 82
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A G++++K L +SD ++E FR GVME+L LGP+V NP+L+Y R++G+GQDGP +
Sbjct: 83 KSADGVALVKRLLGESDALIEGFRPGVMERLGLGPEVCLALNPKLVYGRMTGWGQDGPMA 142
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
GHDINY+ LSG L +G R P P NL DFGGGG+ A GI AL E ++SG+G
Sbjct: 143 MAPGHDINYIALSGALEAIGEAGRPPVLPLNLVGDFGGGGMYLAFGIACALIEAARSGQG 202
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+G+A L ++ + W RG ++ G + FY YETKDG+++ +G+ E
Sbjct: 203 QVVDAAMVDGAASLMTYFHGYRAGGKWAG-RGGSVTGGSSPFYAVYETKDGKYITIGSAE 261
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FYA LL G+ + LP R +L F+ +T+ EWC + ++ C PV
Sbjct: 262 PKFYADLLRQTGLDQAGLPDRADPANWPVIRERLEAVFRSRTRDEWCAQLETSETCFAPV 321
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
L +++A +HPHN RG+FI G++ PAPAPR SRTP S PGV L
Sbjct: 322 LDMAEAATHPHNAARGTFI-EVDGMLQPAPAPRFSRTP--SATPTAGVEPGVDLAAALDG 378
Query: 355 FGYSDANIEELIREDVI 371
+G + I+ L V+
Sbjct: 379 WGLDASEIQTLNASGVV 395
>gi|456352103|dbj|BAM86548.1| putative Alpha-methylacyl-CoA racemase [Agromonas oligotrophica
S58]
Length = 370
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 209/341 (61%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK K
Sbjct: 17 LAGFRIVEFAGIGPGPFACMLLADMGAEVVTLDRVGARKTMKSVAGRGRKVIELDLKDKK 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + L +D ++E FR GVME+L LGPDV+ NPRL+Y R++G+GQ+GP + AG
Sbjct: 77 VIAEVLELLAGADALIEGFRPGVMERLGLGPDVVLARNPRLVYGRMTGWGQEGPLAQAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + R P PP NL DFGGG L +G++ AL E SKSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGPKER-PVPPLNLVGDFGGGALYLVVGVLAALLEASKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 TAMCDGAASLLAMFFDLTAMGRWTEGRERNFLDGGAHFYGVYECACGNFISIGSIEPQFY 255
Query: 243 AQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L ++ + ++ R KL FK KT+ EWC I + TD C PVL++S
Sbjct: 256 ALLRQHADLSDPAFDAQMDPRAWPALREKLVSVFKSKTREEWCAIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+A H H RG F+ R GV PAPAPR SRTP T + E
Sbjct: 316 EAPQHAHMAARGVFV-ERHGVTQPAPAPRFSRTPSTIREPE 355
>gi|407644634|ref|YP_006808393.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardia
brasiliensis ATCC 700358]
gi|407307518|gb|AFU01419.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardia
brasiliensis ATCC 700358]
Length = 373
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/372 (45%), Positives = 233/372 (62%), Gaps = 13/372 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-----QDTVGYGKKSLCIN 57
L G+ V+E A LAP PF MIL + GA V+R+D+ G +P + + GK S+ ++
Sbjct: 4 LHGVKVIEIASLAPGPFGAMILADLGAQVLRVDR-GGKPGAGIVSPEGPLDRGKHSITLD 62
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + LA +DV++E FR GV E+L +GP L NPRLIY R++G+GQ+GP
Sbjct: 63 LKDPDDRDTLLALAEHADVLIEGFRPGVTERLGIGPADLAARNPRLIYGRMTGWGQEGPL 122
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI+Y+ +SG L L+G P PP N+ D+ GGGL+ ALG++ AL+ER +SGR
Sbjct: 123 AHTAGHDIDYIAVSGALGLVGRAGEAPVPPANMLGDYAGGGLLLALGVLGALYERERSGR 182
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+G+A + + LW+ PRGEN+LDGGA FYDTYE DG ++AVG +
Sbjct: 183 GQVVDAAMVDGAALFTASMHGLHHLGLWNFPRGENMLDGGAPFYDTYECADGLYLAVGCV 242
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTP 293
E FY Q+LA LG+ + ELP + G +L E KFKE+T+ EW E+F +DACV P
Sbjct: 243 EIPFYNQMLAILGIDDPELPFQLDKNGWPQLKEVLGAKFKERTRDEWTELFTGSDACVAP 302
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLS +A HPHNV R +FI GV+ PAPAPR RTP +++ A R++L
Sbjct: 303 VLSPWEAHEHPHNVARNAFI-TVNGVLQPAPAPRFDRTP--TEVPAPLSADPQQVRKLLS 359
Query: 354 HFGYSDANIEEL 365
+G +++ L
Sbjct: 360 GWGVPTDDLDRL 371
>gi|359773371|ref|ZP_09276768.1| alpha-methylacyl-CoA racemase [Gordonia effusa NBRC 100432]
gi|359309496|dbj|GAB19546.1| alpha-methylacyl-CoA racemase [Gordonia effusa NBRC 100432]
Length = 370
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 209/337 (62%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L + V+EFAG+ P P M+L + GA VIR+ + G P D + G++ + NLK
Sbjct: 15 LHNVRVIEFAGIGPGPHAAMLLADLGADVIRVQRPGTLPAEGRNADALLRGRRVVEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ NL +++D I+E FR GVME+L GPD L NP LIY R++G+GQ+GP ++
Sbjct: 75 NPADRETILNLISKADAIIEGFRPGVMERLGFGPDDLTAVNPGLIYGRMTGWGQEGPRAN 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHD+NY+ L+G+L +G + PTPP N DFGGG + GI+ A+ ER SG+GQ
Sbjct: 135 LAGHDMNYISLTGMLHAIGRSDEKPTPPLNFVGDFGGGSMFLVFGILAAIIERQTSGKGQ 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW RG NLLD GA +Y+ YET DG++MAVGA+E
Sbjct: 195 VVDAAMVDGASVLGQMMWAFRGTGLWQDRRGVNLLDTGAPYYEVYETSDGKYMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+LL GL +T+ ++P + GR +KFK KT+ EW IFD TDAC + +
Sbjct: 255 QFYAELLKGLDLTDADIPSQN-DFGRWGELKQIFIDKFKTKTRDEWSAIFDGTDACTSGI 313
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
L ++A S PH RG+ + GV+ APR SR+
Sbjct: 314 LDFTEAPSDPHLAARGTLV-EIDGVMQAQVAPRFSRS 349
>gi|329890677|ref|ZP_08269020.1| coA-transferase family III family protein [Brevundimonas diminuta
ATCC 11568]
gi|328845978|gb|EGF95542.1| coA-transferase family III family protein [Brevundimonas diminuta
ATCC 11568]
Length = 352
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 213/344 (61%), Gaps = 15/344 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLC-INLKKA 61
L G+T++E AG+ PAPFCGM+L + GA V+ + + GA P +D + + L +LK
Sbjct: 5 LDGLTIIEIAGIGPAPFCGMMLADHGAEVVLVHRPGATPDPRDPLNRSRARLVEADLKTP 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G +++++LA +D ++E FR GVME+L LGPDVL NPRL+Y R++G+GQDGP +
Sbjct: 65 EGAALIRDLAGAADGLIEGFRPGVMERLGLGPDVLLADNPRLVYGRMTGWGQDGPLAPAP 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDI+Y+ +SG L G PTPP N+ DFGGGG++ A G+V L + ++GRG VI
Sbjct: 125 GHDIDYIAVSGALHAFGRAGEKPTPPINMVGDFGGGGMLLAFGMVAGLLKAQRTGRGDVI 184
Query: 182 DCNMVEGSAYLGS--WLTRTQ------DTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
DC M +GS+ L S W R + W RG NLLD GA FY+ YET DG+++A
Sbjct: 185 DCAMTDGSSLLMSMIWGFRQNLPAPLPPSLAWRDERGVNLLDTGAPFYEVYETSDGKYVA 244
Query: 234 VGALESQFYAQL--LAGL-GMTEEELPQHEVETG--RAKLTEKFKEKTQAEWCEIFDNTD 288
VGA+E FY L L GL G + +P + + KL F+ +T+ +WC D
Sbjct: 245 VGAIEPAFYIALMRLTGLAGDPDFAMPFDPAQWPMLKDKLAAVFRTRTRDDWCSDPDAQG 304
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
ACV PVLS+++A HPHN RG+F+ GVV PAPAPR +P
Sbjct: 305 ACVAPVLSMTEAPDHPHNRARGAFV-TAQGVVQPAPAPRFRDSP 347
>gi|387875071|ref|YP_006305375.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. MOTT36Y]
gi|386788529|gb|AFJ34648.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. MOTT36Y]
Length = 371
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/378 (43%), Positives = 224/378 (59%), Gaps = 17/378 (4%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-PF-VQDTVGYGKKSLCINLKKAKG 63
+ VL+ + L P PFC M+L +FGA V+ +++ G PF + GK+S I+L+ +G
Sbjct: 1 MRVLDLSALGPGPFCSMLLADFGADVVTVERPGVPLPFDPAANLSRGKRSAAIDLRAPRG 60
Query: 64 LSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGH 123
V+ LA+ +DV+LE R G ME+ LGPDVLC N RLIYARL+G+GQDGPYS AGH
Sbjct: 61 AEVIARLADHADVLLESNRPGTMERRGLGPDVLCGRNLRLIYARLTGWGQDGPYSDRAGH 120
Query: 124 DINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDC 183
DINY ++G L +G + P P D GG L+ ALGI+MALFER+++G+GQVID
Sbjct: 121 DINYTAVAGNLGTIG--SEKPVTPLAYVGDLAGGSLVTALGIMMALFERTRTGKGQVIDG 178
Query: 184 NMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYA 243
+V+G+A L + ++ LW RG++LL GGA FY YE +DGRF AVGA+E +FYA
Sbjct: 179 AIVDGAALLAAIHLAELNSGLWSG-RGKHLLSGGAPFYGVYECEDGRFFAVGAIEPKFYA 237
Query: 244 QLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
Q L+ LG+ + L TG R ++ E F+ K ++ W +F + D C PVL L +
Sbjct: 238 QFLSALGIEDIALAAQLDPTGWAQLRERIAEAFRSKARSHWSAVFADIDGCGAPVLELDE 297
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP---GVHTREVLRHFG 356
PH R + + + G V APAPRLSRTP + PAP G T VL G
Sbjct: 298 LADDPHLRARNTILASDDGTVTVAPAPRLSRTPARLR-----PAPASRGADTSAVLGEAG 352
Query: 357 YSDANIEELIREDVIEET 374
++ I EL + I T
Sbjct: 353 FTADEIRELQADGTITTT 370
>gi|403713187|ref|ZP_10939319.1| alpha-methylacyl-CoA racemase [Kineosphaera limosa NBRC 100340]
gi|403212538|dbj|GAB94002.1| alpha-methylacyl-CoA racemase [Kineosphaera limosa NBRC 100340]
Length = 370
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 229/355 (64%), Gaps = 19/355 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-------GAQPFVQDTVGYGKKSLC 55
L G+ V+E A + P P M+L++ GA+V+R+++ G +P D + G++ +
Sbjct: 16 LAGLRVVELASIGPGPHAAMVLSDLGASVVRVEREETPELFPGVRP-SDDAMLRGRRIVT 74
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+LK A G++ + L +++DV++E FR GV+E+L LGPDV + NPRL+Y R++G+GQDG
Sbjct: 75 ADLKSADGVAQVLGLLDEADVLVEGFRPGVLERLGLGPDVCLQRNPRLVYGRMTGWGQDG 134
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P++ AGHDINY+ ++G+L +G + P PP NL DFGGG + GI+ AL+ER +S
Sbjct: 135 PWAHRAGHDINYISVTGVLDNMGPGDGPPMPPLNLVGDFGGGSMFLVTGILAALWERERS 194
Query: 176 GRGQVIDCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
GRGQV+D +V+G++ L W R QD W RG NLLDG A FY TY DGR++A
Sbjct: 195 GRGQVVDAAIVDGTSVLAQMQWSLRAQDA--WHSGRGSNLLDGSAPFYTTYACADGRYVA 252
Query: 234 VGALESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDA 289
VG +E +F+A LLAGL + +LP Q E + R LT+ F ++T+ EW ++F +TDA
Sbjct: 253 VGPIEPKFFAALLAGLQLDPADLPGQWERDRWGELRTALTDAFADRTRDEWAQLFFDTDA 312
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG--TSKITEHNP 342
CVTPVL+ ++A +HPH R +F+ GV PAPAPRLSRTP T +NP
Sbjct: 313 CVTPVLTYAEAAAHPHLRDREAFV-QVDGVTQPAPAPRLSRTPAPRPQPSTRNNP 366
>gi|359789585|ref|ZP_09292526.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium alhagi CCNWXJ12-2]
gi|359254540|gb|EHK57537.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium alhagi CCNWXJ12-2]
Length = 404
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/380 (41%), Positives = 228/380 (60%), Gaps = 16/380 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L G+T++E AGL PAP ++L+E GA V+RI++ A P D +G+ L +
Sbjct: 28 LAGLTIIEMAGLGPAPLAALMLSEMGARVVRIERMASGKAFLALPPEHDLDRHGRSILKL 87
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ +G++++ L ++DV++E FR GVME+L LGP+ + NP+LIYAR++G+GQ GP
Sbjct: 88 DLKRPEGIALVLRLLEKADVLIEGFRPGVMERLGLGPEESQRRNPKLIYARMTGFGQQGP 147
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+ YL SG+L +G + P PP NL AD+GGG + GI+ ALFE S+SG
Sbjct: 148 LAGRAGHDLTYLAYSGVLHAIGPSDGKPVPPLNLVADYGGGAMFLIAGILAALFETSRSG 207
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G++ L + W RG NLLD GA FYDTY T DG+ +AV
Sbjct: 208 KGQVVDAAMVDGASMLAAPFFSFMAAGFWTDRRGSNLLDSGAPFYDTYRTADGKHVAVAC 267
Query: 237 LESQFYAQLLAGLGMTEE----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE QF+A+ L + + + + + R +T + EKT+ EW +F+NTDACV
Sbjct: 268 LEPQFFAEFAKLLPLEQRFAAAQYNRSMWDGMREAITRRIAEKTRDEWAALFENTDACVA 327
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVA-PAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS S+A HPHN+ RG + +AG + PAPAPR SRTP + T V
Sbjct: 328 PVLSFSEAPQHPHNLARGVHV--KAGALERPAPAPRFSRTPSATAAPPAA---DEATAAV 382
Query: 352 LRHFGYSDANIEELIREDVI 371
L G + +IE L + ++
Sbjct: 383 LERLGIAPDDIEALAKAGIV 402
>gi|403723154|ref|ZP_10945476.1| putative fatty acid-CoA racemase [Gordonia rhizosphera NBRC 16068]
gi|403206168|dbj|GAB89807.1| putative fatty acid-CoA racemase [Gordonia rhizosphera NBRC 16068]
Length = 400
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 226/367 (61%), Gaps = 15/367 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDT------VGYGKKSLC 55
L+G+ V+E + P PFC M+L + GA VIR+D+ G P ++ + G++S+
Sbjct: 19 LRGVRVVELGAIGPGPFCAMLLADLGADVIRVDRLSGGGPVGPNSDHRAELINRGRRSVA 78
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK A G ++ + +++DV++E FR GVME+L LGP+ + NP LIY R++GYGQ G
Sbjct: 79 VDLKVAAGRDIVLEMTDRADVLIEGFRPGVMERLGLGPEQCMERNPGLIYGRMTGYGQTG 138
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P S GHDINY+ LSG+LS++G R++ PTPP +L DFGGGG++ ALG++ AL ER +S
Sbjct: 139 PMSQEVGHDINYVALSGVLSMIGRRDQPPTPPLSLVGDFGGGGMVLALGVLAALIERDRS 198
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQV+D +MVEG++ L + + W+ PRG N++D GA FYD YET DG +++V
Sbjct: 199 GVGQVVDASMVEGASLLATAFYGFRQNGTWNAPRGTNIVDSGAPFYDVYETSDGLWLSVA 258
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKF----KEKTQAEWCEIFDNTDACV 291
A+E FY +L+ L + ++LP ++ ++ + F K +T+ EW C+
Sbjct: 259 AMEPHFYRELIDLLELG-DDLPDQNDQSQWPEMKKVFADAIKRRTRDEWVCAARGRAVCI 317
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVL +A + + R SF+ + G + PAPAPR RTP T + P PG HT E+
Sbjct: 318 APVLDAMEAPNSEQSRSRSSFV-DVDGYLQPAPAPRFGRTPAT--VDRRPPLPGEHTDEI 374
Query: 352 LRHFGYS 358
L +G +
Sbjct: 375 LADWGMN 381
>gi|425773593|gb|EKV11936.1| Isopenicillin N-CoA epimerase, putative [Penicillium digitatum Pd1]
gi|425775833|gb|EKV14081.1| Isopenicillin N-CoA epimerase, putative [Penicillium digitatum
PHI26]
Length = 414
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 205/303 (67%), Gaps = 8/303 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
LKGI V+E AGLAP PF G++L ++GA+V+RID+ + D + K S+ ++L
Sbjct: 41 LKGIKVIELAGLAPGPFAGLLLADYGASVLRIDR--PKSISGDQLTRNKTSIILDLHDQA 98
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSSMA 121
++++ L +D++++PFR GV+E+L L P DVL K NPRLI AR++G+ +DG Y MA
Sbjct: 99 SVNILFRLLPTADILIDPFRPGVLERLGLSPTDVLLKHNPRLIVARMTGFRRDGKYKDMA 158
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ +SG+LS+LG + P P N+ DF GGG +C GI++AL RS +GRGQV+
Sbjct: 159 GHDINYIAVSGVLSMLGRASEKPHAPANIIGDFAGGGAVCFQGILLALISRSHTGRGQVV 218
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQ 240
+ NMV+GSAYL ++L ++T PRGENLLDGG +YDTYETKD G++ AVGALE +
Sbjct: 219 EANMVDGSAYLATFLRLGRNTPAGAAPRGENLLDGGCPYYDTYETKDTGQYFAVGALEPR 278
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA L+ GLG +LP E L E +FKEKT+ EW +FD TDAC TPVL
Sbjct: 279 FYAALVRGLGFEIADLPNREDRKQWPALREIFIRRFKEKTRVEWEAVFDRTDACATPVLE 338
Query: 297 LSQ 299
++
Sbjct: 339 QAE 341
>gi|387877153|ref|YP_006307457.1| alpha-methylacyl-CoA racemase [Mycobacterium sp. MOTT36Y]
gi|386790611|gb|AFJ36730.1| alpha-methylacyl-CoA racemase [Mycobacterium sp. MOTT36Y]
Length = 381
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 228/381 (59%), Gaps = 17/381 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA--QPFVQD-TVGYGKKSLCINLK 59
L+G+ ++ GL PAPFCGM+L + GA ++RID P D TV G++SL ++K
Sbjct: 5 LRGVRIVIMGGLGPAPFCGMLLGDLGADIVRIDAVAGVDAPLPIDYTVRRGQRSLAADVK 64
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G ++ LA +D ++ +R GV E+L +GPD L + NPRL+YAR++GYGQDGP +
Sbjct: 65 DPRGRDLVHRLAAGADAFVDVYRPGVAERLGIGPDALTERNPRLVYARMTGYGQDGPLAG 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL L+G L +G +P PP NL D+GGGG++ A+G++ A+ E +SG GQ
Sbjct: 125 HAGHDINYLALTGALHAIGT-AESPVPPLNLIGDYGGGGMLLAVGLLSAILEARESGVGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G A L + W R NLLDGGAHFY Y T DG +AVGA+ES
Sbjct: 184 VLDVAMVDGVATLLAPYFGMLPAGTWRDEREANLLDGGAHFYGVYATADGGHVAVGAMES 243
Query: 240 QFYAQLLAGLGMTEEELPQ-----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FYA+L LG+T +PQ RA L +F EK + EW I D C TPV
Sbjct: 244 KFYAELCDRLGVT---VPQDDDAPAAWAAHRAALAARFAEKPRDEWERILDTPGCCATPV 300
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL++A HPH+V R +F+ G+ PAPAPR SR T T PA PG HT+ +LR
Sbjct: 301 LSLTEAPRHPHHVARRTFV-ELDGITQPAPAPRFSR---TRPATPSAPALPGDHTQALLR 356
Query: 354 HFGYSDANIEELIREDVIEET 374
G I EL+ V+ ++
Sbjct: 357 EAGLDAQTIAELVDSGVVAQS 377
>gi|443306952|ref|ZP_21036739.1| alpha-methylacyl-CoA racemase [Mycobacterium sp. H4Y]
gi|442764320|gb|ELR82318.1| alpha-methylacyl-CoA racemase [Mycobacterium sp. H4Y]
Length = 384
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 228/381 (59%), Gaps = 17/381 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA--QPFVQD-TVGYGKKSLCINLK 59
L+G+ ++ GL PAPFCGM+L + GA ++RID P D TV G++SL ++K
Sbjct: 8 LRGVRIVIMGGLGPAPFCGMLLGDLGADIVRIDAVAGVDAPLPIDYTVRRGQRSLAADVK 67
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G ++ LA +D ++ +R GV E+L +GPD L + NPRL+YAR++GYGQDGP +
Sbjct: 68 DPRGRDLVHRLAAGADAFVDVYRPGVAERLGIGPDALTERNPRLVYARMTGYGQDGPLAG 127
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL L+G L +G +P PP NL D+GGGG++ A+G++ A+ E +SG GQ
Sbjct: 128 HAGHDINYLALTGALHAIGT-AESPVPPLNLIGDYGGGGMLLAVGLLSAILEARESGVGQ 186
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G A L + W R NLLDGGAHFY Y T DG +AVGA+ES
Sbjct: 187 VLDVAMVDGVATLLAPYFGMLPAGTWRDEREANLLDGGAHFYGVYATADGGHVAVGAMES 246
Query: 240 QFYAQLLAGLGMTEEELPQ-----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FYA+L LG+T +PQ RA L +F EK + EW I D C TPV
Sbjct: 247 KFYAELCDRLGVT---VPQDDDAPAAWAAHRAALAARFAEKPRDEWERILDTPGCCATPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL++A HPH+V R +F+ G+ PAPAPR SR T T PA PG HT+ +LR
Sbjct: 304 LSLTEAPRHPHHVARRTFV-ELDGITQPAPAPRFSR---TRPATPSAPALPGDHTQALLR 359
Query: 354 HFGYSDANIEELIREDVIEET 374
G I EL+ V+ ++
Sbjct: 360 EAGLDAQTIAELVDSGVVAQS 380
>gi|225683547|gb|EEH21831.1| alpha-methylacyl-CoA racemase [Paracoccidioides brasiliensis Pb03]
gi|226287167|gb|EEH42680.1| alpha-methylacyl-CoA racemase [Paracoccidioides brasiliensis Pb18]
Length = 397
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 208/314 (66%), Gaps = 21/314 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---------PFVQDTVGYGKKS 53
LKGI VLE AGLAP PF G++L ++GA+V+RID+ Q P DT+ K S
Sbjct: 9 LKGIRVLELAGLAPGPFAGLLLADYGASVLRIDRPHPQAHSTSSTLPPQTSDTLTRHKTS 68
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYG 112
+ ++LK +V+ +L +DV+++PFR GV+EKL L P DVL K NPRLI AR++G+
Sbjct: 69 ISLDLKSPASSAVLLSLLPHADVLIDPFRPGVLEKLGLSPTDVLLKKNPRLIVARMTGFR 128
Query: 113 QDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
+DG Y MAGHDINY+ +SG+L +LG P P N+ DFGGGG MC LGI++AL R
Sbjct: 129 RDGKYKDMAGHDINYIAVSGVLGMLGRAGEPPYAPGNIIGDFGGGGAMCFLGILLALLAR 188
Query: 173 SKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRF 231
++G+GQV+ NMV+GSAYL + +Q +W PRG N+LDGG +Y TYETKD G++
Sbjct: 189 ERTGKGQVVQANMVDGSAYLATMPRLSQKKPIWAGPRGCNVLDGGCPYYGTYETKDAGKY 248
Query: 232 MAVGALESQFYAQLLAGLGMTEEEL-------PQHEVETG---RAKLTEKFKEKTQAEWC 281
AVGALE QF+ LL GLG++++++ + + T R T++FKEKT+ EW
Sbjct: 249 FAVGALEPQFFDALLKGLGLSKQDIMSAGSSGSREDPRTWPYMRGVFTQRFKEKTRKEWE 308
Query: 282 EIFDNTDACVTPVL 295
+IFD TDAC TPVL
Sbjct: 309 DIFDGTDACATPVL 322
>gi|33599548|ref|NP_887108.1| racemase [Bordetella bronchiseptica RB50]
gi|427812791|ref|ZP_18979855.1| putative racemase [Bordetella bronchiseptica 1289]
gi|33567144|emb|CAE31058.1| putative racemase [Bordetella bronchiseptica RB50]
gi|410563791|emb|CCN21329.1| putative racemase [Bordetella bronchiseptica 1289]
Length = 403
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 219/372 (58%), Gaps = 13/372 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L G+ V+E A + P PFCGM+L + GA V+R+D+ A + G GK+S+ +
Sbjct: 24 LHGLRVIEVAAMGPVPFCGMLLADLGAEVLRVDRTADAGLGIALDPRFELRGRGKQSVAM 83
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK GL+ L ++DV+LE FR GV E+L +GP P L+Y R +G+GQ GP
Sbjct: 84 DLKHPDGLAAFLRLVARADVLLEGFRPGVAERLGIGPRACLSLRPSLVYGRATGWGQSGP 143
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S AGHDINYL L+G L ++G P PP NL D+ GG L ALG+V A E ++SG
Sbjct: 144 MSQAAGHDINYLALTGALDMIGPAGGAPVPPLNLVGDYAGGALYLALGVVSAGLEAARSG 203
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D M++G + L + + + + RG N+LDGGA +Y TY T DGR MAVGA
Sbjct: 204 VGQVVDAAMIDGVSSLLTVFHGFRQAGMLNPERGANVLDGGAPYYTTYATLDGRHMAVGA 263
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F+A LL+ LG+ + ELP + R + +F ++T+ +W F + DACV+
Sbjct: 264 IEPKFFAVLLSELGLDQRELPAQQDRARWPQLRQAIAARFAQRTRDDWAAHFQDKDACVS 323
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL+L +A H HN R + + G+ PAPAPR SRTP + I + APG HT + L
Sbjct: 324 PVLALHEAPQHAHNQARAQMV-DVDGIEHPAPAPRFSRTP--ASIRGNAAAPGAHTVQAL 380
Query: 353 RHFGYSDANIEE 364
+G+ A IE
Sbjct: 381 ESWGFDAAEIER 392
>gi|295666888|ref|XP_002793994.1| alpha-methylacyl-CoA racemase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277647|gb|EEH33213.1| alpha-methylacyl-CoA racemase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 397
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 208/314 (66%), Gaps = 21/314 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---------PFVQDTVGYGKKS 53
LKGI VLE AGLAP PF G++L ++GA+V+RID+ Q P DT+ K S
Sbjct: 9 LKGIRVLELAGLAPGPFAGLLLADYGASVLRIDRPHPQAHSTSSTLPPQTSDTLTRHKTS 68
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYG 112
+ ++LK +V+ +L +DV+++PFR GV+EKL L P DVL K NPRLI AR++G+
Sbjct: 69 ISLDLKSPASSAVLLSLLPHADVLIDPFRPGVLEKLGLSPTDVLLKKNPRLIVARMTGFR 128
Query: 113 QDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
+DG Y MAGHDINY+ +SG+L +LG P P N+ DFGGGG MC LGI++AL R
Sbjct: 129 RDGKYKDMAGHDINYIAVSGVLGMLGRAGEPPYAPGNIIGDFGGGGAMCFLGILLALLAR 188
Query: 173 SKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRF 231
++G+GQV+ NMV+GSAYL + +Q +W PRG N+LDGG +Y TYETKD G++
Sbjct: 189 ERTGKGQVVQANMVDGSAYLATMPRLSQKKPIWAGPRGCNVLDGGCPYYGTYETKDAGKY 248
Query: 232 MAVGALESQFYAQLLAGLGMTEEEL-------PQHEVETG---RAKLTEKFKEKTQAEWC 281
AVGALE QF+ LL GLG++++++ + + T R T++FKEKT+ EW
Sbjct: 249 FAVGALEPQFFDALLKGLGLSKQDIMSAGSSGSREDPRTWPCMRGVFTQRFKEKTRKEWE 308
Query: 282 EIFDNTDACVTPVL 295
+IFD TDAC TPVL
Sbjct: 309 DIFDETDACATPVL 322
>gi|345571286|gb|EGX54100.1| hypothetical protein AOL_s00004g133 [Arthrobotrys oligospora ATCC
24927]
Length = 407
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/317 (47%), Positives = 210/317 (66%), Gaps = 13/317 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQPF--VQDTVGYGKKSLC 55
L GI VLE AGLAP PF G++L ++GATV+R+D+ HG P +D + K S+
Sbjct: 7 LSGIRVLELAGLAPGPFAGLLLADYGATVLRLDRATPETHGPNPPPPTRDQLTRRKSSIA 66
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQD 114
++++ GLS +K L D++++PFR GV+EK L P VL NPRLI AR++G+ +D
Sbjct: 67 VDMRSPGGLSFIKALVPHVDILIDPFRPGVLEKAGLCPKTVLTALNPRLIVARMTGFRRD 126
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
G Y+ MAGHDINY+ +SG+LS+LG P P N+ DF GGG +C +GI++AL ER +
Sbjct: 127 GKYAQMAGHDINYIAVSGVLSMLGREGDKPYAPGNILGDFAGGGAVCFMGILLALIERGR 186
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
+GRGQV++ NMV+GSAYL ++ + + W RG N+LDGG +YDTYET+DG FMAV
Sbjct: 187 TGRGQVVEANMVDGSAYLATFPRLGRKNWSWGGERGRNVLDGGCPYYDTYETRDGGFMAV 246
Query: 235 GALESQFYAQLLAGLGMTEEEL--PQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDA 289
G+LE F+ LL GLG+T+ +L P+ + T R T+ FKEKT+AEW IFD TDA
Sbjct: 247 GSLEPHFFDALLKGLGITKSDLLGPREDPSTWKELRELFTKLFKEKTRAEWETIFDGTDA 306
Query: 290 CVTPVLSLSQATSHPHN 306
C TPVL+ + ++
Sbjct: 307 CCTPVLTQGELEEQGYD 323
>gi|433650091|ref|YP_007295093.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
smegmatis JS623]
gi|433299868|gb|AGB25688.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
smegmatis JS623]
Length = 359
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/343 (45%), Positives = 212/343 (61%), Gaps = 22/343 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L G+ VLE G+ P P M+L + GA V+R+ + G D + GK+ + +++K
Sbjct: 7 LAGVKVLELGGIGPGPHAAMVLADLGADVVRVRRPGGLQMPAENLDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G + LA ++DV+L+ FR G E+L +GPD NPRLIYAR++G+GQDGPY+
Sbjct: 67 SEPG--KLLELAAKADVLLDGFRPGTCERLGIGPDECAAVNPRLIYARITGWGQDGPYAK 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINYL +G LS +G+R+R P P NL ADFGGG + LGIV AL+ER +SG+GQ
Sbjct: 125 VAGHDINYLSQTGALSAIGYRDRPPVAPLNLVADFGGGSMFVLLGIVAALYERERSGKGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + T + R +LDGGA FY TYET DG++MAVGA+E
Sbjct: 185 VIDAAMVDGVSILAQMAWTMKATGSLNDERESFMLDGGAPFYRTYETADGKYMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQ----------HEVETGRAKLTEKFKEKTQAEWCEIFDNTDA 289
QF+AQLLAGLG+T +++P HE+ +KF KT+ EW EIF TDA
Sbjct: 245 QFFAQLLAGLGLTTDDVPNQLDAAAFPAVHEL------FADKFAGKTRDEWTEIFAGTDA 298
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
CVTPVL+ +A + H R + + + V APAPR SRTP
Sbjct: 299 CVTPVLTWREAAQNEHLRARSTLVTSN-DVDQAAPAPRFSRTP 340
>gi|90422429|ref|YP_530799.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris BisB18]
gi|90104443|gb|ABD86480.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris BisB18]
Length = 372
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 219/349 (62%), Gaps = 7/349 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-GKKSLCINLKKA 61
L G+ ++EFAGL P PF M+L + GA V+ + + Q ++ TV G++S+ +LK
Sbjct: 19 LSGLRIVEFAGLGPGPFAAMMLADMGADVVTLSRGEQQMGLRGTVMMRGRRSITADLKDK 78
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
++ + L + +D ++E +R GVME+L LGPDV+ N RL+YAR++G+GQ GP S A
Sbjct: 79 ACIAEVLKLCDGADALIEGYRPGVMERLGLGPDVVTTRNKRLVYARMTGWGQSGPLSGAA 138
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G L+ +G R+R P PP NL D+GGG L +G++ AL E SG+GQV+
Sbjct: 139 GHDINYIALTGALAAIGERDR-PVPPLNLVGDYGGGALYLVVGLLAALLEAKTSGQGQVV 197
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M +G+A L S W R NLLDGGAHFY TY+ KDG F+A+GA+E QF
Sbjct: 198 DVAMCDGAASLMSLFCELSAAGRWKDGRESNLLDGGAHFYGTYQCKDGEFIALGAIEPQF 257
Query: 242 YAQL--LAGLG--MTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA+L LAGL + ++ + +AK+ E FK KT+AEWC I + TD C PVLSL
Sbjct: 258 YAELRRLAGLDDPAFDRQMSPKDWPALKAKMAELFKTKTRAEWCAIMEGTDVCFAPVLSL 317
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGV 346
S+A HPH R +F+ + GV+ PAPAPR SRTP + + GV
Sbjct: 318 SEAPLHPHMAERAAFV-SHDGVLQPAPAPRFSRTPSAIRAAVSDDLAGV 365
>gi|365901056|ref|ZP_09438913.1| putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp. STM
3843]
gi|365418183|emb|CCE11455.1| putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp. STM
3843]
Length = 369
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 209/334 (62%), Gaps = 6/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LAGFRIVEFAGIGPGPFACMMLADMGAEVVTLDRVGARKTMKSVAGRGRKVVELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+S + +L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ+GP + AG
Sbjct: 77 AVSQVLDLLAGADALIEGFRPGVMERLGLGPDVVLARNPQLVYGRMTGWGQEGPLAQAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + R P PP NL DFGGG L +G++ AL E SKSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGPKER-PVPPLNLVGDFGGGALYLVVGVLAALLEVSKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S W + R N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 AAMCDGAASLMSMFFDLAALGRWSEGRERNFLDGGAHFYGVYECACGNFVSIGSIEPQFY 255
Query: 243 AQLLAGLGMTEE----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G+++E ++ R KL + FK KT+ +WC I + TD C PVL+++
Sbjct: 256 ALLRQHAGLSDECYDAQMNPAAWPDLREKLVDVFKSKTRDDWCRIMEGTDICFAPVLTMT 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A H H RG F+ R G+ PAPAPR SRTP
Sbjct: 316 EAPKHAHMAARGVFV-ERHGITQPAPAPRFSRTP 348
>gi|329894360|ref|ZP_08270230.1| Alpha-methylacyl-CoA racemase [gamma proteobacterium IMCC3088]
gi|328923156|gb|EGG30479.1| Alpha-methylacyl-CoA racemase [gamma proteobacterium IMCC3088]
Length = 377
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/370 (44%), Positives = 222/370 (60%), Gaps = 10/370 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L G TVLE G+ PAP GMIL + GA VIRID+ G ++D GKKS+ +NLK
Sbjct: 4 LNGFTVLELGGIGPAPMGGMILADMGAEVIRIDRKGGMDPRIMKDVSARGKKSIVVNLKT 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ L +DV+++P+R GV EKL +GPDV NP+LI+AR++G+GQ+GP +
Sbjct: 64 QEGVETFLRLVENADVVIDPYRPGVCEKLGIGPDVCMARNPKLIFARMTGWGQEGPMAQS 123
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G L G R P P NL D GGGG++ G++ AL E S+SG+GQV
Sbjct: 124 AGHDINYISLTGALFATGRRGERPVPALNLIGDMGGGGMLLVNGVLAALLEASQSGKGQV 183
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGE-NLLDGGAHFYDTYETKDGRFMAVGALES 239
+D MV+G+A L + + WD + E N+LDG AHFYDTYE G ++++G++E
Sbjct: 184 LDVAMVDGAAQLMWMMHGFEAVGAWDATQREANMLDGAAHFYDTYECACGGYVSIGSIEP 243
Query: 240 QFYAQLLAGLGMTEEELPQHEVET----GRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA L+ + E +AKLTE FK KT+ EWC I + TD C PVL
Sbjct: 244 QFYALLIELAQLDEATFADQNNPALWPELKAKLTEVFKAKTRDEWCAIMEGTDVCFAPVL 303
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
S +A SHP N+ R + GVV PAPAPR SRTP S+I G T VL+
Sbjct: 304 SFKEAPSHPANIARNVY-QEVDGVVQPAPAPRFSRTP--SEIRHGAHGIGEDTVSVLQAM 360
Query: 356 GYSDANIEEL 365
G++ IE+L
Sbjct: 361 GFAADEIEQL 370
>gi|94314475|ref|YP_587684.1| alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
gi|93358327|gb|ABF12415.1| Alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
Length = 369
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 212/334 (63%), Gaps = 5/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EFAGL PAPF M+L + GA V+RID+ G + D VG G++++ ++LK
Sbjct: 11 LNGVRVVEFAGLGPAPFACMMLADMGADVVRIDRPGTKARDNDLVGRGRRTVLLDLKAEG 70
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ ++L Q+D+++E FR GVME+L LGPD L NPRL+Y R++G+GQDGP S AG
Sbjct: 71 DIERARSLLAQADILVEGFRPGVMERLGLGPDTLLNINPRLVYGRMTGWGQDGPLSLAAG 130
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ +G + P PP NL D+GGG L +GI+ AL ++G GQVID
Sbjct: 131 HDINYIALTGALAAIGDGDGLPVPPLNLVGDYGGGSLYLLVGILAALHNSRETGHGQVID 190
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+ +G+ L ++ + L+ + R N+LDGGA +Y TY TKD + + VGA+E QF+
Sbjct: 191 AAICDGAMSLMTFAQSQRLNGLFKEQRSSNMLDGGAPYYTTYRTKDDKVVCVGAIEPQFF 250
Query: 243 AQLLAGLGMTEE----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L LG+ E + + RA+L + FK +TQAEW + + TD+C +PV+SL
Sbjct: 251 ALLCEKLGVKPELRDAQNDRKRWPILRAELEQIFKGQTQAEWTALLEGTDSCFSPVISLG 310
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ +SHPH RG+ GV PAPAPR SRTP
Sbjct: 311 EVSSHPHMAARGALT-EVDGVACPAPAPRFSRTP 343
>gi|380494520|emb|CCF33087.1| CoA-transferase family III, partial [Colletotrichum higginsianum]
Length = 335
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/307 (48%), Positives = 207/307 (67%), Gaps = 10/307 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH---GAQPF-VQDTVGYGKKSLCINL 58
L G+ VLEFAGLAP PF GM+L + GA+V+RID+ P +D + K S+ ++L
Sbjct: 7 LTGLKVLEFAGLAPGPFAGMLLADAGASVLRIDRAVTGSRTPLPTEDMLARHKASVAVDL 66
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K GL+++K LA ++DV+++PFR GV+EKL LGPDVL ++N L+YAR++G+ +DG Y
Sbjct: 67 KSPAGLALVKRLAAEADVLIDPFRPGVLEKLGLGPDVLTRTNRGLVYARMTGFRRDGRYR 126
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS-KSGR 177
MAGHDINYL +SG LSLLG P PP N+ ADF GGG + GI+MAL R+ G
Sbjct: 127 DMAGHDINYLAVSGALSLLGREGEKPHPPWNILADFAGGGAVLFQGILMALLARAGNGGT 186
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV++ NMV+GS+YL ++ L D RG N+LDGG +YDTYET+DG+++A+GAL
Sbjct: 187 GQVVEANMVDGSSYLATFPRFALKNPLGDNGRGRNMLDGGCPYYDTYETRDGKYVAIGAL 246
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QF+A L+ GLG+ + ++ + G R TE FK +T++EW E+FD TDAC T
Sbjct: 247 EPQFFAALVEGLGLAGKGWEENRFDRGRWGELRGLFTEIFKSRTRSEWEEVFDGTDACCT 306
Query: 293 PVLSLSQ 299
PVL +
Sbjct: 307 PVLEYHE 313
>gi|334343311|ref|YP_004555915.1| alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
gi|334103986|gb|AEG51409.1| Alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
Length = 364
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 215/346 (62%), Gaps = 9/346 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG-YGKKSLCINLKKA 61
L G+ V+EFAG+ PAPFCGM+L++ GA V+ ID+ G +D V G+ L ++LK
Sbjct: 10 LAGVRVVEFAGIGPAPFCGMLLSDLGAEVLLIDRAGQPTVARDAVTCRGRHHLALDLKNP 69
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ + + + Q+D+I+E FR GVME+L LGPDVL NPRL+Y R++G+GQ GPYS MA
Sbjct: 70 QSVEQVLAIVGQADMIIEGFRPGVMERLGLGPDVLRGINPRLVYGRMTGWGQTGPYSQMA 129
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ SG L +G R P PP NL DFGGG L A+G++ AL ++G GQV+
Sbjct: 130 GHDLNYIATSGALHAIG-RADRPIPPLNLVGDFGGGALYLAVGLLAALHHAKQTGEGQVV 188
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D + +G+ L S + + W R N LDG AH+YD YE DG+++++ ++E QF
Sbjct: 189 DAAICDGALSLMSMMYGYLNDGRWTDSRESNRLDGAAHYYDVYECADGKWISIASIEPQF 248
Query: 242 YAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
Y +L+A L + + E + + + +A L +FK + Q+ WC +F+ TD C PVLS
Sbjct: 249 YGRLMALLEIADPEF-RDQADPALWPKLKANLAARFKAEPQSHWCALFEGTDVCFAPVLS 307
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
+ +A HN R +F+ AG++ PAPAPR RTP + ++ +P
Sbjct: 308 MEEAPHGVHNKAREAFV-EHAGMMQPAPAPRFERTPSAIQASQTDP 352
>gi|452841358|gb|EME43295.1| hypothetical protein DOTSEDRAFT_45266 [Dothistroma septosporum
NZE10]
Length = 409
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/313 (46%), Positives = 212/313 (67%), Gaps = 16/313 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-------QDTVGYGKKSLC 55
+ I VLEFAGLAP P+ GM+L ++GA V+R+D+ Q F D + K S+
Sbjct: 6 MSSIRVLEFAGLAPGPYAGMLLADYGADVLRVDRAHPQAFTDDPPPPTNDALTRHKSSIT 65
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQD 114
+N K G+ ++K + + DV+++PFR GV+EK+ L P+ VL + NPR+I AR++G+ +D
Sbjct: 66 VNTKTEAGIELLKLIIAKVDVVIDPFRPGVLEKMGLSPEKVLLRLNPRVIVARMTGFRRD 125
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER-S 173
G Y MAGHDINY+ +SG+L +LG P PP N+ DF GGG +C +GI++AL++R +
Sbjct: 126 GKYKDMAGHDINYIAVSGVLGMLGREGEKPYPPGNILGDFAGGGAVCFMGILLALYQRDT 185
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
K+G GQV++ NMV+GSA+L + T +W+ PRG N+LDGGA +Y TYETKDG+ MA
Sbjct: 186 KTGMGQVVEANMVDGSAHLATMPRFVAKTPMWNAPRGTNVLDGGAPYYGTYETKDGKHMA 245
Query: 234 VGALESQFYAQLLAGLGMTEE--ELPQHEVETGRAKLTEK-----FKEKTQAEWCEIFDN 286
VGALE QFYA LL GL ++ E + P++ + K+ ++ FK+KT+A+W +IFD
Sbjct: 246 VGALEPQFYAALLKGLEISAEKDQWPKNREDKSTWKVQQQAFTRLFKQKTRADWEKIFDG 305
Query: 287 TDACVTPVLSLSQ 299
TDACVTPVL ++
Sbjct: 306 TDACVTPVLEQAE 318
>gi|296170032|ref|ZP_06851636.1| alpha-methylacyl-CoA racemase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895300|gb|EFG75009.1| alpha-methylacyl-CoA racemase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 361
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 214/335 (63%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
LKG+ V+E AG+ P P MIL + GA V+RID+ + P +D + ++ + ++LK
Sbjct: 5 LKGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSGPGGVAKDAMLRNRRVVTVDLKS 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G +V+ L ++DV++E FR GV E+L LGP+ + N RLIYAR++G+GQ GP S
Sbjct: 65 DEGRAVVLKLVAKADVLIEGFRPGVTERLGLGPEQCAEVNERLIYARMTGWGQTGPRSQQ 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+GIL +G N P PP NL DFGGG + +GI+ AL+ER SG+GQV
Sbjct: 125 AGHDINYISLNGILHAIGRANERPVPPLNLVGDFGGGSMFLLVGILSALWERQNSGKGQV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID MV+GS+ L + + +W RG N+LDGGA +YDTYE DGR++AVGA+E Q
Sbjct: 185 IDAAMVDGSSVLIQMMWAMRGLGMWSDARGTNMLDGGAPYYDTYECADGRYVAVGAIEPQ 244
Query: 241 FYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA +LAGLG+ LP Q++V RA LT F + W ++F ++DACVTPVL+
Sbjct: 245 FYAAMLAGLGLDAAGLPAQNDVTRWPELRAALTAAFAAHDRDHWAKVFADSDACVTPVLA 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH R +F + G + P PAPR SRT
Sbjct: 305 FGEVHTEPHITERNTFY-DADGGLQPLPAPRFSRT 338
>gi|33595257|ref|NP_882900.1| racemase [Bordetella parapertussis 12822]
gi|33565334|emb|CAE36137.1| putative racemase [Bordetella parapertussis]
Length = 403
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 219/373 (58%), Gaps = 13/373 (3%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLC 55
+L G+ V+E A + P PFCGM+L + GA V+R+D+ A + G GK+S+
Sbjct: 23 SLHGLRVIEVAAMGPVPFCGMLLADLGAEVLRVDRTADAGLGIALDPRFELRGRGKQSVA 82
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK GL+ L ++DV+LE FR GV E+L +GP P L+Y R +G+GQ G
Sbjct: 83 MDLKHPDGLAAFLRLVARADVLLEGFRPGVAERLGIGPRACLSLRPSLVYGRATGWGQSG 142
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P S AGHDINYL L+G L ++G P PP NL D+ GG L ALG+V A E ++S
Sbjct: 143 PMSQAAGHDINYLALTGALDMIGPAGGAPVPPLNLVGDYAGGALYLALGVVSAGLEAARS 202
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQV+D M++G + L + + + + RG N+LDGGA +Y TY T DGR MAVG
Sbjct: 203 GVGQVVDAAMIDGVSSLLTVFHGFRQAGMLNPERGANVLDGGAPYYTTYATLDGRHMAVG 262
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
A+E +F+A LL+ LG+ + ELP + R + +F + T+ +W F + DACV
Sbjct: 263 AIEPKFFAVLLSELGLDQRELPAQQDRARWPQLRQAIAARFAQHTRDDWAAHFQDKDACV 322
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
+PVL+L +A H HN R + + G+ PAPAPR SRTP + I + APG HT +
Sbjct: 323 SPVLALHEAPQHAHNQARAQMV-DVDGIEHPAPAPRFSRTP--ASIRGNAAAPGAHTVQA 379
Query: 352 LRHFGYSDANIEE 364
L +G+ A IE
Sbjct: 380 LESWGFDAAEIER 392
>gi|254820759|ref|ZP_05225760.1| Alpha-methylacyl-CoA racemase [Mycobacterium intracellulare ATCC
13950]
Length = 381
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/382 (43%), Positives = 228/382 (59%), Gaps = 19/382 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQDTVGYGKKSLCINL 58
L+G+ ++ GL PAPFCGM+L + GA V+RID G P + TV G++SL ++
Sbjct: 5 LRGVRIVMMGGLGPAPFCGMLLGDLGADVVRIDAVAGVDGPLP-IDYTVRRGQRSLAADV 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ LA +D ++ +R GV E+L +GPD L + NPRL+YAR++GYGQDGP +
Sbjct: 64 KDPRGRELVHRLAAGADAFVDVYRPGVAERLGIGPDALTERNPRLVYARMTGYGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL L+G L +G +P PP NL D+GGGG++ A+G++ A+ E +SG G
Sbjct: 124 GHAGHDINYLALTGALHAIGT-AESPVPPLNLIGDYGGGGMLLAVGLLSAILEARESGVG 182
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+G A L + W R NLLDGGAHFY Y T D +AVGA+E
Sbjct: 183 QVLDVAMVDGVATLLAPYFGMLPAGTWRDEREANLLDGGAHFYGVYATADSGHIAVGAME 242
Query: 239 SQFYAQLLAGLGMTEEELPQ-----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
S+FYA+L LG+T +PQ RA L +F EK + EW I D C TP
Sbjct: 243 SKFYAELCDRLGVT---VPQDDDAPAAWAAHRAALAARFAEKPRDEWERILDTPGCCATP 299
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVL 352
VLSL++A HPH+V R +F+ G+ PAPAPR SR T T PA PG HT+ +L
Sbjct: 300 VLSLTEAPRHPHHVARQTFV-ELDGITQPAPAPRFSR---TRPATPSAPALPGDHTQALL 355
Query: 353 RHFGYSDANIEELIREDVIEET 374
R G I EL+ V+ ++
Sbjct: 356 REAGLDAQTIAELVDSGVVAQS 377
>gi|146343714|ref|YP_001208762.1| alpha-methylacyl-CoA racemase [Bradyrhizobium sp. ORS 278]
gi|146196520|emb|CAL80547.1| Putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp. ORS
278]
Length = 370
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 209/341 (61%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LAGFRIVEFAGIGPGPFACMLLADMGAEVVTLDRVGARKTMKSVAGRGRKVIELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ+GP + AG
Sbjct: 77 VIAEVLDLLAGADALIEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQEGPLAHAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G R R P PP NL DFGGG L +G++ AL E SKSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGPRER-PVPPLNLVGDFGGGALYLVVGVLAALLEASKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 TAMCDGAASLLAMFFDLTAMGRWTEGRERNFLDGGAHFYGVYECACGNFISIGSIEPQFY 255
Query: 243 AQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
L G++ E ++ + KL FK KT+ EWC I + TD C PVL++S
Sbjct: 256 MLLRQHAGLSDPAFEAQMDPRAWPALKEKLVAVFKTKTREEWCAIMEGTDVCFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+A H H RG F+ R GV PAPAPR SRTP T + E
Sbjct: 316 EAPKHAHMAARGVFV-ERHGVTQPAPAPRFSRTPSTIREPE 355
>gi|363421961|ref|ZP_09310042.1| alpha-methylacyl-CoA racemase [Rhodococcus pyridinivorans AK37]
gi|359733522|gb|EHK82514.1| alpha-methylacyl-CoA racemase [Rhodococcus pyridinivorans AK37]
Length = 365
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 215/353 (60%), Gaps = 9/353 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L G+ V+EF GL P P +L + GA V+ + + G P +D + ++ + NLK
Sbjct: 12 LAGVRVVEFKGLGPGPHAATLLADLGADVVIVQRPGEIPPEGQRDPIQRNRRIVEANLKD 71
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ + L ++DV++E FR GV E+L LGPDV+ + NPR++Y R++G+GQ+GP ++
Sbjct: 72 PADIEKVLTLLERADVLIEGFRPGVTERLGLGPDVVLERNPRIVYGRMTGWGQEGPLANA 131
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQV
Sbjct: 132 AGHDINYISLTGVLHAIGRQGERPVPPLNMVGDFGGGSMFLVFGILSALVERQTSGKGQV 191
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+G+ L + + W RG N+LD GA FY+ Y TKDG++MAVG++E Q
Sbjct: 192 VDAAMVDGALALSHMMWAFRGRGAWSDERGINMLDTGAPFYEVYATKDGKYMAVGSIEPQ 251
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAK-----LTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA LL GL + +LP H+++T R T+KF KT+ EW EIF TDACV+PVL
Sbjct: 252 FYALLLQGLELDPADLP-HQLDTSRWAEMKKIFTDKFLSKTRDEWTEIFLGTDACVSPVL 310
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
+ ++A + H V RGS I GVV APAPR SRTP + A + T
Sbjct: 311 TWAEAEKNEHLVARGSLI-EIDGVVQHAPAPRFSRTPAGEPVGPAAEATDIDT 362
>gi|402569399|ref|YP_006618743.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cepacia GG4]
gi|402250596|gb|AFQ51049.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cepacia GG4]
Length = 365
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 212/333 (63%), Gaps = 5/333 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EFAG+ P PFC M+L + GA V+RI + G P +D ++++ ++L+ A
Sbjct: 5 LAGLKVVEFAGIGPGPFCAMVLGDLGADVVRIARPGQSPDARDVTNRNRRTVQLDLRAAG 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ +L +D ++E FR GVME+L LGP + NPRL+Y R++G+GQ GP S AG
Sbjct: 65 AREHVMSLIGAADCLIEGFRPGVMERLGLGPQDCLEVNPRLVYGRMTGWGQHGPLSQAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ +SG L+ +G + P PP N DFGGGG++ A+G++ AL E SG GQV+D
Sbjct: 125 HDINYIAISGALNAIGRPDEAPPPPLNYVGDFGGGGMLLAVGLLAALLEAKNSGHGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L ++L + W RGENLLDGGAHFYDTY DG+F+A+GA+E QFY
Sbjct: 185 AAMTDGTALLSAFLYGLRAMGQWGNQRGENLLDGGAHFYDTYACADGKFIAIGAIEPQFY 244
Query: 243 AQL--LAGLG--MTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A+L L GL + +E++ + +L F+ +T+ EWCE+ + TDAC PVL
Sbjct: 245 AELRTLCGLDDPLFDEQMDAARWPLLKLRLANVFRTRTRQEWCEMLEGTDACFAPVLDWD 304
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+A HPHNV R +++ GV PAPAPR SRT
Sbjct: 305 EALEHPHNVARETYL-TVDGVAQPAPAPRFSRT 336
>gi|410422215|ref|YP_006902664.1| racemase [Bordetella bronchiseptica MO149]
gi|408449510|emb|CCJ61201.1| putative racemase [Bordetella bronchiseptica MO149]
Length = 381
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 220/369 (59%), Gaps = 13/369 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-------QPFVQDTVGYGKKSLC 55
L G+ V+EF + PAP C M+L + GATVIR+++ +P + + + +
Sbjct: 4 LAGLKVVEFPAIGPAPMCAMLLADMGATVIRLERQQPSADLGVERPLKYNLLLRNRPGIS 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK +G+ + L +DV+LE FR G ME++ GPD + NPRL+Y R++G+GQ G
Sbjct: 64 VDLKAPEGVQFAQALLASADVLLEGFRPGTMERMGFGPDACLQQNPRLVYGRMTGWGQTG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
PY++MAGHD+NY+ ++G L +G + + PTPP NL DFGGG L A+G++ A+F +
Sbjct: 124 PYAAMAGHDLNYIAMTGALDAIGRKGQPPTPPLNLVGDFGGGALYLAMGVLAAVFAARGT 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQV+D MV+G+A L + L++ RG N+LD GA +YD Y DG+++++
Sbjct: 184 GKGQVVDAAMVDGAASLMTPFFGMAAAGLFNAERGTNVLDSGAPYYDVYRCADGKYLSIA 243
Query: 236 ALESQFYAQLLAGLGMTEEELPQH-EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+ES+F LG+ Q + + R + + +TQA+WCE FD TDACV PV
Sbjct: 244 PIESRFRRIFFERLGLDAPAGDQRADWDALREAIAARIATRTQAQWCECFDGTDACVAPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV-LR 353
LS+++A SHPHN R +F+ + GVV PAPAPR TP T P P E L
Sbjct: 304 LSIAEAPSHPHNQARATFL-DIDGVVQPAPAPRFGATP---LATPRPPEPANSRFEACLG 359
Query: 354 HFGYSDANI 362
+G SDA+I
Sbjct: 360 EWGMSDADI 368
>gi|384101798|ref|ZP_10002830.1| putative acyl-CoA transferase/carnitine dehydratase [Rhodococcus
imtechensis RKJ300]
gi|383840685|gb|EID79987.1| putative acyl-CoA transferase/carnitine dehydratase [Rhodococcus
imtechensis RKJ300]
Length = 371
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 209/343 (60%), Gaps = 13/343 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQ---DTVGYGKKSLCINL 58
L G+ VLE AG+ P P MIL + GA V+R+++ HG D + ++S+ +L
Sbjct: 5 LHGLKVLELAGIGPGPHAAMILGDLGADVVRVERPHGGLDVTNGRADHMLRNRRSVGADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + LA+ +DV++E FR G E+L LGPD + NP LIYAR++G+GQDGP S
Sbjct: 65 KTKEGRARVLALASVADVLIEGFRPGTTERLGLGPDDCAEVNPALIYARMTGWGQDGPLS 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G L +G R+ P PP NL DFGGG + +GI+ ALFER +SG+G
Sbjct: 125 PRAGHDINYISLTGALHAIGDRDGKPVPPLNLVGDFGGGSMFLLVGILSALFERQRSGKG 184
Query: 179 QVIDCNMVEGSAYLGS--WLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
QV+D MV+G++ L W R D W RG NLLDGGA FYDTY D R++A+GA
Sbjct: 185 QVVDAAMVDGASVLMQMMWAMRGADA--WTGERGANLLDGGAPFYDTYRCADDRWIALGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E QFYAQLL GLG+ +LP R T+ ++ W +F +TDACVT
Sbjct: 243 IEPQFYAQLLHGLGIPPADLPDQNDRDQWPLLRKLFTDTIAAHSRDHWATVFADTDACVT 302
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
PVL+L + + H HRG+ I V PAPAPR SRTP +
Sbjct: 303 PVLTLDEVAAGDHLAHRGTII-EIDEVPQPAPAPRFSRTPAAT 344
>gi|383824826|ref|ZP_09979997.1| Mcr protein [Mycobacterium xenopi RIVM700367]
gi|383336454|gb|EID14852.1| Mcr protein [Mycobacterium xenopi RIVM700367]
Length = 360
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 218/360 (60%), Gaps = 12/360 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
L G+ V+E AG+ P P MIL + GA V+R+++ A V+D + ++ + +LK
Sbjct: 5 LTGLRVIELAGIGPGPHAAMILGDLGADVVRVERPTAASGPVRDAMLRNRRFVTADLKSD 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G ++ L ++DV++E +R GV E+L LGPD + N RLIYAR++G+GQ GP S A
Sbjct: 65 EGRELVLRLVAKADVLIEGYRPGVTERLGLGPDDCARVNDRLIYARMTGWGQTGPRSQQA 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G+L +G + P PP NL DFGGG + +GI+ AL+ER SG+GQVI
Sbjct: 125 GHDINYISLNGVLHAIGRAGQRPVPPLNLVGDFGGGSMFLLVGILAALWERQASGKGQVI 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M++GS+ L + + +W RG N+LDGGA +YDTYE DGR++AVGA+E QF
Sbjct: 185 DAAMIDGSSVLIQMMWAMRAMGMWSDERGTNMLDGGAPYYDTYECADGRYVAVGAIEPQF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA+LL GLG+ + +LP + R ++ E K + W +F ++DACVTPVLS
Sbjct: 245 YAELLKGLGLDDADLPGQNDRSRWPELRTRIAEVIGSKDRDHWATVFADSDACVTPVLSF 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA--PGVHTREVLRHF 355
+ + PH R +F G + PAPAPR SRT + PA PG T VL +
Sbjct: 305 GEVETEPHITARRTFYQADGG-LQPAPAPRFSRT----VPDQPRPAGPPGSDTEAVLADW 359
>gi|336370577|gb|EGN98917.1| hypothetical protein SERLA73DRAFT_181644 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383358|gb|EGO24507.1| hypothetical protein SERLADRAFT_356117 [Serpula lacrymans var.
lacrymans S7.9]
Length = 395
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 168/410 (40%), Positives = 231/410 (56%), Gaps = 44/410 (10%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
M+L G+ V+EFAGLAPAPF G++L + GA VIRID PF D + GK S+ INLK
Sbjct: 1 MSLAGLKVIEFAGLAPAPFAGLVLADHGAEVIRIDP--PSPFNNDILCRGKTSIAINLKT 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS------NPRLIYARLSGYGQD 114
GL V K L Q+D++++PFR GV+E+L LGP++ S N +LI+AR+ G+ +
Sbjct: 59 RSGLVVAKKLITQADILIDPFRPGVLERLGLGPEIFLGSEETKGLNDKLIFARVVGFPRA 118
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP+ +MAGHDINYL SG+LS+L P+ P NL ADFGGGGLMCA GI++AL ER K
Sbjct: 119 GPHKTMAGHDINYLATSGVLSMLPGTQEKPSFPLNLLADFGGGGLMCATGILLALVERGK 178
Query: 175 SGRGQVIDCNMVEGSAYLGSW--LTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFM 232
SG+GQV+ +MV G+ YL S+ L ++ + + + RG N+LDGGA FYD Y DGR+M
Sbjct: 179 SGKGQVVCTDMVSGTRYLSSFPLLHASESSPYFSQNRGSNILDGGAPFYDVYTCSDGRWM 238
Query: 233 AVGALESQFYAQLLAGL-------GMTEEELPQHEVETGRAK-------LTEKFKEKTQA 278
+VG +E F+A+ +A G+ P +T + L + FK + +
Sbjct: 239 SVGCVEPVFFAEFIARFDKALQNEGINSSWKPSQATQTKKEDWPNLKQYLHDGFKSRPRE 298
Query: 279 EWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKI- 337
W +F TDACV PVLS +A N + PAP P LSRTP + +
Sbjct: 299 FWEIVFHETDACVLPVLSPKEAE-------------NLDSSLYPAPHPHLSRTPSSPPLL 345
Query: 338 ------TEHNPAPGVHTREVLRHFGYSDANIEELIREDVIEETIEMNSKL 381
PG HT ++L GY+ +EL + + KL
Sbjct: 346 PDGGFGKSSRLEPGAHTEQILTSLGYTIEEQKELALGGAFGQDARIEPKL 395
>gi|374985401|ref|YP_004960896.1| fatty acid-CoA racemase [Streptomyces bingchenggensis BCW-1]
gi|297156053|gb|ADI05765.1| fatty acid-CoA racemase [Streptomyces bingchenggensis BCW-1]
Length = 377
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 221/363 (60%), Gaps = 13/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-----GKKSLCIN 57
L G+ V+E AG+ P PF M+L + GA V+R+D+ G ++ Y K+S+ ++
Sbjct: 9 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGTGGLKVDPAYDLSNRNKRSVLLD 68
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G + + +L ++DV++E +R GV E+L +GPD NPRL+Y R++G+GQDGP
Sbjct: 69 LKTEPGQAAVLDLVERADVLIEGYRPGVAERLGVGPDACLARNPRLVYGRMTGWGQDGPL 128
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI Y+ ++G L ++G + P P NL D+ GG L +G++ AL SG
Sbjct: 129 AETAGHDIGYIAVTGALGMIGAPDGPPAVPANLLGDYAGGSLYLVIGVLAALQHARTSGE 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + + W RG NLLDGG+ FY TYET DG +MAVGAL
Sbjct: 189 GQVVDAAIVDGTAHLTAVIHGMMAAGGWQDRRGANLLDGGSPFYGTYETADGGYMAVGAL 248
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E +FYA+ + LG+ ++ + + + RA + ++FK++T+ EW +F ++DACV PV
Sbjct: 249 EPKFYAEFIELLGIADQAPGRRDFDRWGELRALIADRFKQRTREEWTAVFASSDACVAPV 308
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL +A HPH R +F+ + G+ PAPAPR S TPG + PA PG EV R
Sbjct: 309 LSLREAPGHPHLAARATFV-DHGGITQPAPAPRFSATPGAVR---RPPARPGADAAEVAR 364
Query: 354 HFG 356
+G
Sbjct: 365 DWG 367
>gi|158313436|ref|YP_001505944.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
gi|158108841|gb|ABW11038.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
Length = 423
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/383 (42%), Positives = 226/383 (59%), Gaps = 22/383 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQ--------------DTV 47
L G+ V+E AG P PF MIL + GA V+R+ + P + D +
Sbjct: 24 LAGVKVVELAGRGPGPFGAMILADLGAEVVRVARLEDVAPSEEESATERSLKGHRRIDLL 83
Query: 48 GYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYAR 107
G++S+ ++LK G+ + + +++DV++E +R GV E+L LGPD NPRL+YAR
Sbjct: 84 TRGRRSVALDLKHPGGVEAVLRMVDRADVLVEGYRPGVAERLGLGPDECLWRNPRLVYAR 143
Query: 108 LSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVM 167
++G+GQ+GPY+ GHDINY+ L+G L L + P PP NL DFGGGG++ +G++
Sbjct: 144 MTGFGQEGPYTRSPGHDINYVALAGALEPLRRPGQPPAPPLNLLGDFGGGGMLLVIGVLG 203
Query: 168 ALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETK 227
AL ER++SG GQV+D MV+G A L + + LW G N+L A FY+ YET
Sbjct: 204 ALVERARSGLGQVVDAAMVDGVALLTTLFHGMRAEGLWSDEPGTNILSLAAPFYNVYETS 263
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEI 283
DGR +AVGA E FYA+LL LG+ +E L Q GRA L F+ +T AEW
Sbjct: 264 DGRHVAVGAGEHPFYAELLQRLGLGDELLRQQGDPATWPAGRAALEAVFRTRTLAEWTAE 323
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA 343
+ TD C TPVL++ +AT HPHNV R +F+ GVV PAPAPR SRT + A
Sbjct: 324 LEGTDTCFTPVLTMEEATRHPHNVERQTFV-EVDGVVQPAPAPRFSRT--PAGPGGPPAA 380
Query: 344 PGVHTREVLRHFGYSDANIEELI 366
G HTREVL +G++ +++ L+
Sbjct: 381 AGQHTREVLLDWGFAQDDLDALL 403
>gi|379748496|ref|YP_005339317.1| alpha-methylacyl-CoA racemase [Mycobacterium intracellulare ATCC
13950]
gi|378800860|gb|AFC44996.1| alpha-methylacyl-CoA racemase [Mycobacterium intracellulare ATCC
13950]
Length = 381
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/382 (43%), Positives = 228/382 (59%), Gaps = 19/382 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQDTVGYGKKSLCINL 58
L+ + ++ GL PAPFCGM+L + GA ++RID G P + TV G++SL ++
Sbjct: 5 LRDVRIVMMGGLGPAPFCGMLLGDLGADIVRIDAVAGVDGPLP-IDYTVRRGQRSLAADV 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ LA +D ++ +R GV E+L +GPD L + NPRL+YAR++GYGQDGP +
Sbjct: 64 KDPRGRDLVHRLAAGADAFVDVYRPGVAERLGIGPDALTERNPRLVYARMTGYGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL L+G L +G +P PP NL D+GGGG++ A+G++ A+ E +SG G
Sbjct: 124 GHAGHDINYLALTGALHAIGT-AESPVPPLNLIGDYGGGGMLLAVGLLSAILEARESGVG 182
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+G A L + W R NLLDGGAHFY Y T DG +AVGA+E
Sbjct: 183 QVLDVAMVDGVATLLAPYFGMLPAGTWRDEREANLLDGGAHFYGVYATADGGHVAVGAME 242
Query: 239 SQFYAQLLAGLGMTEEELPQ-----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
S+FYA+L LG+T +PQ RA L +F EK + EW I D C TP
Sbjct: 243 SKFYAELCDRLGVT---VPQDDDAPAAWAAHRAALAARFAEKPRDEWERILDTPGCCATP 299
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVL 352
VLSL++A HPH+V R +F+ G+ PAPAPR SR T T PA PG HT+ +L
Sbjct: 300 VLSLTEAPRHPHHVARQTFV-ELDGITQPAPAPRFSR---TRPATPSAPALPGDHTQALL 355
Query: 353 RHFGYSDANIEELIREDVIEET 374
R G I EL+ V+ ++
Sbjct: 356 REAGLDAQTIAELVDSGVVAQS 377
>gi|374620106|ref|ZP_09692640.1| putative acyl-CoA transferase/carnitine dehydratase [gamma
proteobacterium HIMB55]
gi|374303333|gb|EHQ57517.1| putative acyl-CoA transferase/carnitine dehydratase [gamma
proteobacterium HIMB55]
Length = 377
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 220/375 (58%), Gaps = 15/375 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQPFVQDTV-GYGKKSLC 55
AL GI V+E AG+ P P GM+L + GA V ID+ A F + T+ GKKS+
Sbjct: 5 ALNGIKVVEIAGIGPGPCAGMMLADMGAEVTVIDRPVPDPEAAAAFAKYTIFNRGKKSVA 64
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+NLK + + + + +DV++E FR GVME+L LGP+V C+ NP+L+Y R++G+GQ G
Sbjct: 65 LNLKDPDAVGALLKIIDDADVLIEGFRPGVMERLGLGPEVCCQRNPKLVYGRMTGWGQTG 124
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P S AGHD NY+ L+G L G PT P L D GGG +M GI+ A+ +
Sbjct: 125 PLSHAAGHDPNYIALTGALWAGGSHEHRPTAPLTLIGDLGGGTMMLVFGILSAIIHAKST 184
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQV+D + +G+AY+ + L ++ G D G+ ++DTY+ DG ++ V
Sbjct: 185 GEGQVVDAAITDGAAYISTLLWGMHNSGQMTDEPGSGWADFGSPWHDTYQCSDGEYVTVC 244
Query: 236 ALESQFYAQLLAGLGMTEE-----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
ALE QFYA L+ GL +T++ + + + + G+ K E F KT+ EWC+ F+ TD C
Sbjct: 245 ALEPQFYALLIQGLELTDDPIFANQWDKDQWQAGKEKFREIFAAKTRQEWCDQFEGTDVC 304
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
PVL+ S+A HPHNV R +F R G+ P+PAP+LS TPG++ + P PG +T E
Sbjct: 305 FAPVLNFSEALEHPHNVARETFF-TRDGIAQPSPAPKLSGTPGSAGVV---PVPGANTAE 360
Query: 351 VLRHFGYSDANIEEL 365
VL G DA + +L
Sbjct: 361 VLGSLGLDDATLAKL 375
>gi|441520689|ref|ZP_21002355.1| alpha-methylacyl-CoA racemase [Gordonia sihwensis NBRC 108236]
gi|441459849|dbj|GAC60316.1| alpha-methylacyl-CoA racemase [Gordonia sihwensis NBRC 108236]
Length = 370
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 205/336 (61%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L I V+EFAG+ P P M+L + GA V+R+ + G P + D + G++ + NLK
Sbjct: 15 LADIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGELPSPERNADAMLRGRRVIEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ NL ++DV++E FR GVME+L GPD L NP LIY R++G+GQDGP +
Sbjct: 75 NPADRETILNLVAKADVVIEGFRPGVMERLGFGPDDLHAVNPGLIYGRMTGWGQDGPRAD 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHD+NY+ L+G+L +G N PTPP NL DFGGG + +G++ AL ER+ SG+G+
Sbjct: 135 LAGHDMNYISLTGMLHAIGRPNEKPTPPLNLVGDFGGGSMFLVMGVLAALVERATSGKGE 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID M +G++ LG + + T LW RG NLLD GA FY+ YET DG++MAVGA+E
Sbjct: 195 VIDAAMCDGASVLGQMMWAFRGTGLWQDRRGVNLLDTGAPFYEVYETSDGKWMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELPQH--EVETGRAK--LTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GL + LP + G K + FK KT+ EW IFD TDAC +P+L
Sbjct: 255 QFYAELLKGLELDPASLPNQLDTAKWGELKQIFADTFKTKTRDEWAAIFDGTDACTSPIL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
++A PH RG+ + GV APR R+
Sbjct: 315 DFTEAPHDPHLAARGTLV-EIDGVTQAQVAPRFQRS 349
>gi|419961762|ref|ZP_14477765.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus M213]
gi|414572786|gb|EKT83476.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus M213]
Length = 364
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 206/336 (61%), Gaps = 9/336 (2%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLKKAK 62
+ ++E AG+ P P +L + GA V+R+ + G P +D G++ + NLK
Sbjct: 13 VRIVELAGIGPGPHAATLLADLGADVVRVQRAGLLPTAGQPRDQTHRGRRVVEANLKDPA 72
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ ++ L ++DV++E FR GV E+L LGPDV NPRLIY R++G+GQ+GP + AG
Sbjct: 73 DIELVLGLIERADVLIEGFRPGVTERLGLGPDVALAHNPRLIYGRMTGWGQEGPLAQTAG 132
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQV+D
Sbjct: 133 HDINYISLTGVLHAIGRKGERPVPPLNMVGDFGGGSMFLVFGILAALIERHTSGKGQVVD 192
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G+ L + + W RG N+LD GA +Y+TYET DGR+MAVGA+E QFY
Sbjct: 193 AAMVDGTLALSHMMWSFRGIGRWSDERGVNMLDTGAPYYNTYETADGRYMAVGAVEPQFY 252
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPVLSLS 298
A L+ GLG+ +LP +G ++L ++F E KT+ EW IFD TDAC TPVL+ +
Sbjct: 253 ALLVEGLGLDPADLPAQNDRSGWSQLQKQFAEVFLTKTRDEWAAIFDGTDACTTPVLTFA 312
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PG 333
+A +PH RGS + V PAPR SR+ PG
Sbjct: 313 EAPQNPHIAARGSLV-ELDRVTQHRPAPRFSRSEPG 347
>gi|149186321|ref|ZP_01864634.1| L-carnitine dehydratase/bile acid-inducible protein F
[Erythrobacter sp. SD-21]
gi|148829910|gb|EDL48348.1| L-carnitine dehydratase/bile acid-inducible protein F
[Erythrobacter sp. SD-21]
Length = 358
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 150/339 (44%), Positives = 207/339 (61%), Gaps = 8/339 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EF G+ P P M+L + GA V+RI++ G QP + V + ++LK +
Sbjct: 6 LTGLRVVEFQGIGPGPHVAMLLADLGAEVVRIERPGHQP-MNAVVERARHRAAVDLKSEE 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + +K +DV++E FR GVME+L LGPD + K NPRL+YAR++G+GQDGP + AG
Sbjct: 65 GKAFVKQALAAADVLVEGFRPGVMERLGLGPDEMLKLNPRLVYARMTGWGQDGPLAQAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HD+NY+ ++G L +G + P PP NL DFGGG + CA GI+ AL+ER SG+GQV+D
Sbjct: 125 HDLNYIAITGALDSIGAKGELPVPPQNLVGDFGGGSMYCAFGILAALYEREVSGKGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G L S+ + L RG LL G AHFY YE DG+ ++VGA+E QFY
Sbjct: 185 AAIVDGVTSLMSFFYGQPHSALRTTERGAGLLGGAAHFYRCYECADGKEVSVGAIEPQFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A+LLA +EL +++T KL FK KTQAEW + + TDAC PV+ L
Sbjct: 245 AELLA-RADAPKELADGQLDTSNWDDYTEKLAALFKTKTQAEWAALLEGTDACFAPVVPL 303
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK 336
+A HPH RG+F+ + G APAPR RTPG +
Sbjct: 304 DEAKDHPHMKARGAFV-DHGGRSHTAPAPRFDRTPGVIR 341
>gi|422319348|ref|ZP_16400423.1| hypothetical protein HMPREF0005_02622 [Achromobacter xylosoxidans
C54]
gi|317405961|gb|EFV86239.1| hypothetical protein HMPREF0005_02622 [Achromobacter xylosoxidans
C54]
Length = 387
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 208/338 (61%), Gaps = 11/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
LKGI ++E AG+ P P M+L + GATV+RID+ A+P + + +K++ +
Sbjct: 4 LKGIKIIELAGIGPCPMAAMLLADMGATVLRIDRPDPSSLGIARPLKFNLLLRNRKAIAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK A ++ L +D +E FR GVME+L LGP+ NPRL+Y R++G+GQ GP
Sbjct: 64 DLKSAAARDLVLRLVEGADAFIEGFRPGVMERLGLGPESCLARNPRLVYGRMTGWGQTGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHD+NY+GL+G+L +G + PTPP NL DFGGG L ALG++ A+ E ++SG
Sbjct: 124 LAQVAGHDLNYIGLTGVLHAIGREGQPPTPPLNLVGDFGGGALYLALGVLAAIVEAARSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+G+A L + L LW+ RG+N+LD GA+FYD YE DG++++V
Sbjct: 184 KGQVVDAAIVDGTASLATSLFGLHAAGLWNNERGDNMLDSGAYFYDVYECADGKWVSVAP 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE +F+ +LL +G+ E L G R+ + FK KTQ +WCE+ TD CV
Sbjct: 244 LERKFHDRLLELMGLDRESLGIQAGREGWPLARSIFAKAFKMKTQDQWCELLGTTDVCVA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
PVLSL + HPH R I GV PAPAPR SR
Sbjct: 304 PVLSLDEVAQHPHIRQREVLI-EVDGVQQPAPAPRFSR 340
>gi|365888258|ref|ZP_09427042.1| putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp. STM
3809]
gi|365336086|emb|CCD99573.1| putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp. STM
3809]
Length = 370
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 208/338 (61%), Gaps = 6/338 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+ + ++LK
Sbjct: 17 LAGFRIVEFAGIGPGPFACMLLADMGAEVVTLDRVGARKNMKSVAGRGRTVIELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGPDV+ NPRL+Y R++G+GQ+GP + AG
Sbjct: 77 VIADVLDLLAGADALIEGFRPGVMERLGLGPDVVLARNPRLVYGRMTGWGQEGPLAHAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + R P PP NL DFGGG L +G++ AL E SKSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGPKER-PVPPLNLVGDFGGGALYLVVGVLAALLEASKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 TAMCDGAASLLAMFFDLTAMGRWTEGRERNFLDGGAHFYGVYECACGNFISIGSIEPQFY 255
Query: 243 AQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G++ E ++ + KL FK KT+ EWC I + TD C PVL++S
Sbjct: 256 ALLRQHAGLSDPAFEAQMDPRAWPALKEKLVAVFKSKTREEWCAIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK 336
+A H H RG F+ R GV PAPAPR SRTP T +
Sbjct: 316 EAPKHAHMAARGVFV-ERHGVTQPAPAPRFSRTPSTIR 352
>gi|395492957|ref|ZP_10424536.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
sp. PAMC 26617]
Length = 372
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 223/371 (60%), Gaps = 12/371 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQDTVGYGKKSLCINLK 59
L G+ +LE AG+ P PFCGM+L + GA VIR+++ G +D + ++++ ++LK
Sbjct: 7 LAGLRILEMAGIGPGPFCGMMLADHGAEVIRVERPSRGGMTDPARDPLLRSRRTIVLDLK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+++ ++ ++ LA D ++E +R GVME+L LGPD+L NPRL+Y R++G+GQ GP +
Sbjct: 67 RSEAVAAVRRLAATCDGLIEGYRPGVMERLGLGPDLLIADNPRLVYGRMTGWGQTGPLAD 126
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
GHDI+YL +SG L LG R P P NLAADFGGGG+M A G++ A+ +G GQ
Sbjct: 127 EPGHDIDYLAISGTLHALGEAGRKPNAPINLAADFGGGGMMLAFGMLAAILHAKATGEGQ 186
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M +GSA L S + + W RG NLLDGGA FYDTYET DG+++AVGA+E
Sbjct: 187 VVDAAMTDGSAVLASMIWGFRAMGQWRDERGTNLLDGGAPFYDTYETADGKWIAVGAIEP 246
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA L L + E V + +L + +F+++ + EW F +ACV PVL
Sbjct: 247 QFYAALRRVLALDGPEWDAQFVPSAWPRLKQALATRFRDRPRDEWVAAFAGHEACVAPVL 306
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+A +HPHNV RG+F+ VV PAPAPR S S+ A + +L
Sbjct: 307 GFDEAAAHPHNVARGTFV-TAGDVVQPAPAPRYS----ASETVSPRMAGASDSVGILTEA 361
Query: 356 GYSDANIEELI 366
G++ A I L+
Sbjct: 362 GFTQAEIAALL 372
>gi|315049419|ref|XP_003174084.1| alpha-methylacyl-CoA racemase [Arthroderma gypseum CBS 118893]
gi|311342051|gb|EFR01254.1| alpha-methylacyl-CoA racemase [Arthroderma gypseum CBS 118893]
Length = 399
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 212/318 (66%), Gaps = 21/318 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQ----PFVQDTVGYGKKS 53
L+GI V+E AGLAP PF G++L+++GA+V+RID+ H P D + K S
Sbjct: 8 LQGIRVVELAGLAPGPFAGLMLSDYGASVVRIDRPHPNAHSQSKPLPPPTFDALTRHKTS 67
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYG 112
+ ++LK +V+ +L +++DV+++P+R GV+EKL L P VL K NPRLI AR++G+
Sbjct: 68 ISLDLKNPASKAVLLSLLSKADVLIDPYRPGVLEKLGLCPTTVLLKHNPRLIIARMTGFR 127
Query: 113 QDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
+DG Y MAGHDINY+ +SG LSLLG P P N+ DF GGG +C GI++AL R
Sbjct: 128 RDGKYKDMAGHDINYIAVSGALSLLGRAGEKPYAPGNILGDFAGGGAVCFQGILLALLAR 187
Query: 173 SKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRF 231
+GRGQV++ NMV+GSAYL ++ + T +WD RG N+LDGG +YDTYETKD GR+
Sbjct: 188 QTTGRGQVVNANMVDGSAYLATFPRLARQTPMWDGSRGSNVLDGGCPYYDTYETKDKGRY 247
Query: 232 MAVGALESQFYAQLLAGLGMTEEE-------LPQHEVETG---RAKLTEKFKEKTQAEWC 281
AVGALE QFY+ LL GLG+ EEE + + + E RA ++FK+KT++EW
Sbjct: 248 FAVGALEPQFYSALLDGLGLREEEVFPVGSSMAREDKENWPFMRAVFEKRFKQKTRSEWE 307
Query: 282 EIFDNTDACVTPVLSLSQ 299
IFD TDAC TPVL++ +
Sbjct: 308 AIFDGTDACATPVLTMDE 325
>gi|114570033|ref|YP_756713.1| L-carnitine dehydratase/bile acid-inducible protein F [Maricaulis
maris MCS10]
gi|114340495|gb|ABI65775.1| L-carnitine dehydratase/bile acid-inducible protein F [Maricaulis
maris MCS10]
Length = 363
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 211/355 (59%), Gaps = 9/355 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKA 61
LKG+ VLEF GL PAPFC M+L++ GA V+RID+ GA D + G++S+ ++LK
Sbjct: 7 LKGVKVLEFVGLGPAPFCAMMLSDMGADVVRIDRPGAHGLGPADVLARGRRSVGLDLKDP 66
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ L + L +D++LE +R GVME+L LGPD+ + NP L+Y R++G+GQ GP + A
Sbjct: 67 QELETARRLIASADILLEGYRPGVMERLGLGPDIALERNPSLVYGRMTGWGQYGPLAHAA 126
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G L +G R++ P P NL DFGGG + G++ AL +G GQV+
Sbjct: 127 GHDINYISLTGALGAMGDRDK-PAIPLNLVGDFGGGAMYLGFGVLAALHHARATGEGQVV 185
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D +V+G++ L + + LW RG NLLDG AHFY YE DG F+++G LE +F
Sbjct: 186 DAAIVDGASSLMASQYQLAALGLWSPERGANLLDGAAHFYTVYECADGHFISIGPLEPEF 245
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA L G + P G +A L + FK +++ +WC++ + +DAC PVL+
Sbjct: 246 YALLCEKTGFDGQAWPADWSGKGWAQAKAALADLFKTRSRQDWCDLLEGSDACFAPVLTY 305
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
++ HPH V RG + GV APAPR SRTPG I P PG VL
Sbjct: 306 EESARHPHMVERGVHV-EIDGVRQAAPAPRFSRTPGA--IQGSAPQPGADREAVL 357
>gi|421482295|ref|ZP_15929877.1| CoA-transferase [Achromobacter piechaudii HLE]
gi|400199630|gb|EJO32584.1| CoA-transferase [Achromobacter piechaudii HLE]
Length = 364
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/367 (40%), Positives = 212/367 (57%), Gaps = 10/367 (2%)
Query: 11 FAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINLKKAKGLSVMK 68
AG+ P PFC M+L + GA VIRID+ G + G++++ ++LK+ ++
Sbjct: 1 MAGIGPGPFCAMMLADMGADVIRIDRLTPGFLGGGGTVIDRGRRTIALDLKQPGAADIVL 60
Query: 69 NLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYL 128
L +++D +LE FR GVME+L LGPD NPRL+Y R++G+GQDGP + AGHD+NY+
Sbjct: 61 RLLDKADALLEGFRPGVMERLGLGPDECLARNPRLVYGRMTGWGQDGPLAQSAGHDLNYI 120
Query: 129 GLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEG 188
++G L +G P PP +L D GGG +M A G++ L E ++GRGQV+D + +G
Sbjct: 121 AITGALHAMGHAELPPAPPLHLVGDMGGGAMMLAFGVLCGLLEAGRTGRGQVVDAAICDG 180
Query: 189 SAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAG 248
++ L S W R N+LDGGAHFY Y DG+++++GA+E QFY LL
Sbjct: 181 ASLLASAYHGKLQNGGWVNQRQSNMLDGGAHFYGCYTCADGKYVSIGAIEPQFYRLLLER 240
Query: 249 LGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHP 304
G+ + + Q + RAKL KT+ +WC + + TDAC PVL +A HP
Sbjct: 241 CGIDDPDFQQQWDRAQWPQLRAKLAGIIAGKTREQWCLLLEGTDACFAPVLDFEEAPRHP 300
Query: 305 HNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEE 364
H+ RGSF+ G + PAPAPRLSRTPG ++ P PG HT E+L G + I+
Sbjct: 301 HHQARGSFV-ESGGTLCPAPAPRLSRTPGQARAV---PTPGEHTEELLAELGLAQTEIQA 356
Query: 365 LIREDVI 371
L I
Sbjct: 357 LRERGAI 363
>gi|183984278|ref|YP_001852569.1| alpha-methylacyl-CoA racemase Mcr [Mycobacterium marinum M]
gi|183177604|gb|ACC42714.1| alpha-methylacyl-CoA racemase Mcr [Mycobacterium marinum M]
Length = 365
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 207/338 (61%), Gaps = 9/338 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQPFVQDTVGYGKKSLCIN 57
L G+ V+E AG+ P P MIL + GA V+RID+ G V+D + ++ + +
Sbjct: 5 LNGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSSAGGRGGGVKDAMLRNRRIVTAD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G ++ L ++DV++E +R GV E+L LGP K N RLIYAR++G+GQ GP
Sbjct: 65 LKSDQGRELVLKLVAKADVLIEGYRPGVTERLGLGPQDCAKVNDRLIYARMTGWGQAGPR 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
S AGHDINY+ L+GIL +G P PP NL DFGGG + +GI+ AL+ER SG+
Sbjct: 125 SQQAGHDINYISLNGILHAIGRVGERPVPPLNLVGDFGGGSMFLLVGILAALWERHNSGK 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQVID MV+GS+ L + + +W RG N+LDGGA +YDTYE DG ++AVGA+
Sbjct: 185 GQVIDAAMVDGSSVLVQMMWAMRGIGIWSDVRGTNMLDGGAPYYDTYECADGGYVAVGAI 244
Query: 238 ESQFYAQLLAGLGMTEEEL-PQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYA +LAGLG+ L PQ++V RA LTE F + W ++F ++DACVTP
Sbjct: 245 EPQFYAAMLAGLGLDAVNLPPQNDVARWPELRAVLTEAFGRYDRDHWAKVFADSDACVTP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
VLS + + PH R +F G P PAPR SRT
Sbjct: 305 VLSFGEVHTEPHIAERNTFYEGDDGGPQPMPAPRFSRT 342
>gi|374607848|ref|ZP_09680648.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium tusciae JS617]
gi|373554410|gb|EHP80989.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium tusciae JS617]
Length = 359
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 218/338 (64%), Gaps = 12/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG--AQPFVQ-DTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G A P D + GK+++ +++K
Sbjct: 7 LAGVKVIELGGIGPGPHAGMVLADLGADVVRVRRPGGLAMPAENIDLMHRGKRTVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K + +LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +
Sbjct: 67 KDP--QALLDLAAKADVLLDCFRPGTCERLGIGPDDCAALNPRLIFARITGWGQDGPLAM 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G LS +G+R+R P P NL ADFGGG ++ LGIV AL+ER +SG GQ
Sbjct: 125 TAGHDINYLSQTGALSAIGFRDRPPVAPLNLVADFGGGSMLVLLGIVTALYERERSGTGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + R +LDGGA FY TYET DGR+MAVG++E
Sbjct: 185 VIDAAMVDGVSILAQMMWTIKAGGTLKDERESFMLDGGAPFYRTYETADGRYMAVGSIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+AQLL GLG++ +E+P ++ + G R T++F KT+ EW +F TDACVTPV
Sbjct: 245 QFFAQLLDGLGLSPDEVP-NQFDAGAYPEMRRIFTDRFASKTRDEWTAVFAGTDACVTPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
L+ ++A + H + R S + + GV APAPR SRTP
Sbjct: 304 LTWTEAAQNEHLLAR-STVMSAHGVEQAAPAPRFSRTP 340
>gi|118616738|ref|YP_905070.1| alpha-methylacyl-CoA racemase Mcr [Mycobacterium ulcerans Agy99]
gi|443492410|ref|YP_007370557.1| alpha-methylacyl-CoA racemase Mcr [Mycobacterium liflandii 128FXT]
gi|118568848|gb|ABL03599.1| alpha-methylacyl-CoA racemase Mcr [Mycobacterium ulcerans Agy99]
gi|442584907|gb|AGC64050.1| alpha-methylacyl-CoA racemase Mcr [Mycobacterium liflandii 128FXT]
Length = 365
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 207/338 (61%), Gaps = 9/338 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQPFVQDTVGYGKKSLCIN 57
L G+ V+E AG+ P P MIL + GA V+RID+ G V+D + ++ + +
Sbjct: 5 LNGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSSAGGRGGGVKDAMLRNRRIVTAD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G ++ L ++DV++E +R GV E+L LGP K N RLIYAR++G+GQ GP
Sbjct: 65 LKSDQGRELVLKLVAKADVLIEGYRPGVTERLGLGPQDCAKVNDRLIYARMTGWGQAGPR 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
S AGHDINY+ L+GIL +G P PP NL DFGGG + +GI+ AL+ER SG+
Sbjct: 125 SQQAGHDINYISLNGILHAIGRVGERPVPPLNLVGDFGGGSMFLLVGILAALWERHNSGK 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQVID MV+GS+ L + + +W RG N+LDGGA +YDTYE DG ++AVGA+
Sbjct: 185 GQVIDAAMVDGSSVLVQMMWAMRGIGIWSDVRGTNMLDGGAPYYDTYECADGGYVAVGAI 244
Query: 238 ESQFYAQLLAGLGMTEEEL-PQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYA +LAGLG+ L PQ++V RA LTE F + W ++F ++DACVTP
Sbjct: 245 EPQFYAAMLAGLGLDAVNLPPQNDVARWPELRAVLTEAFGRYDRDHWAKVFADSDACVTP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
VLS + + PH R +F G P PAPR SRT
Sbjct: 305 VLSFGEVHTEPHIAERNTFYEGDDGGPQPMPAPRFSRT 342
>gi|297190610|ref|ZP_06908008.1| fatty acid-CoA racemase [Streptomyces pristinaespiralis ATCC 25486]
gi|297150555|gb|EDY61830.2| fatty acid-CoA racemase [Streptomyces pristinaespiralis ATCC 25486]
Length = 364
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 217/356 (60%), Gaps = 11/356 (3%)
Query: 8 VLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINLKKAKG 63
++E AG+ P PF M+L + GA V+R+D+ G D K+S+ I+LK A G
Sbjct: 1 MVELAGIGPGPFAAMLLGDLGADVVRVDRPGGAGLAIDPAYDLTNRNKRSVLIDLKSADG 60
Query: 64 LSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGH 123
+ + +L ++DV++E FR GV E+L +GPD NPRL+Y R++G+GQ GP + AGH
Sbjct: 61 PARVLDLVERADVLIEGFRPGVAERLGVGPDECLARNPRLVYGRMTGWGQQGPLAQRAGH 120
Query: 124 DINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL-FERSKSGRGQVID 182
DI+Y+ L+G LS++G PT P NL D+ GG L +G++ AL R++ G GQV+D
Sbjct: 121 DISYIALTGTLSMIGSSGEPPTVPANLVGDYAGGSLYLVIGVLAALQHARAEGGGGQVVD 180
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G+ +L + + W RG NLLDGG FY TYET DG +MAVGALE QFY
Sbjct: 181 AAIVDGATHLATMIHGMMAAGGWQDRRGANLLDGGCPFYGTYETADGEYMAVGALEQQFY 240
Query: 243 AQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
+ + LG+ ++ + + + R + ++F+ +T+AEW +F+ TDACV PVLSL +
Sbjct: 241 DRFVELLGIKDDIPARKDFDRWDELRQAVADRFRSRTRAEWTAVFEGTDACVAPVLSLRE 300
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
A +HPH RG+F+ + G+ PAPAPR S TP + ++ PG T +V R +
Sbjct: 301 APAHPHLAARGTFV-DHGGITQPAPAPRFSATP--TAVSRGPAQPGADTADVARDW 353
>gi|331694393|ref|YP_004330632.1| alpha-methylacyl-CoA racemase [Pseudonocardia dioxanivorans CB1190]
gi|326949082|gb|AEA22779.1| Alpha-methylacyl-CoA racemase [Pseudonocardia dioxanivorans CB1190]
Length = 378
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 218/381 (57%), Gaps = 20/381 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH------GAQPFVQDTVGYGKKSLCI 56
L G+ V+E AGL PAPF GM+L + GA VIR+D+ + + + G++S+ +
Sbjct: 5 LSGVRVVELAGLGPAPFAGMMLADMGADVIRVDRVTRDHEVAESTALSEVIERGRRSIAV 64
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
NLK +G+ V+ +L +D ++E FR GV E+L +GP NP L+Y R++G+GQ GP
Sbjct: 65 NLKDERGVGVVLDLVATADALMEGFRPGVAERLGIGPAPSLARNPALVYGRMTGWGQTGP 124
Query: 117 YSSMAGHDINYLGLSGILSLLG-WRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
+ GHD+NY+ L+G+L +G +P P NL DFGGGG++ A G+V + +
Sbjct: 125 LARTVGHDVNYIALTGVLDSIGPAGGGDPVLPLNLVGDFGGGGMLLAFGLVCGIVSARAT 184
Query: 176 GRGQVIDCNMVEGSAYL-GSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
GRGQV+D MV+G+A L +L R + W PRG N++DGGAHFY Y T D R++AV
Sbjct: 185 GRGQVVDAAMVDGAALLMAPYLARDE----W-GPRGTNMVDGGAHFYGVYATADDRYVAV 239
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDAC 290
GALE QFYA L +G+ ELP+ +L E+ F+ +T+ EWC +F + C
Sbjct: 240 GALEPQFYAVFLDRVGLAGAELPEQMDREAWPRLRERVGAIFRTRTRDEWCAVFAGAETC 299
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
PVLS +A + PH RG+ + R G+ PAPAPR TP T + P PG H
Sbjct: 300 FAPVLSRDEAAADPHLAARGTIV-TRDGLRQPAPAPRFDATPAT--LPPPRPRPGEHGDA 356
Query: 351 VLRHFGYSDANIEELIREDVI 371
VL G A I L VI
Sbjct: 357 VLTELGLDAAEIATLRAAGVI 377
>gi|424853154|ref|ZP_18277531.1| L-carnitine dehydratase [Rhodococcus opacus PD630]
gi|356665077|gb|EHI45159.1| L-carnitine dehydratase [Rhodococcus opacus PD630]
Length = 385
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/377 (42%), Positives = 218/377 (57%), Gaps = 13/377 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI +LE G+ P PF GM+L + GA VIRID+ G QP + ++S+ I+LK+ +
Sbjct: 14 LTGIRILEIGGIGPTPFAGMMLADLGADVIRIDRPG-QPG-HPVLNRNRRSIVIDLKQPR 71
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G+ ++ LA + D +E +R GV E+L +GPD L +NP L+Y R++G+GQDGP + G
Sbjct: 72 GVELVTTLAARCDATIEGYRPGVAERLGVGPDALLAANPALVYGRMTGWGQDGPLAQAPG 131
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ LSG L +G + +P P NL DFGGGG++ A G+V L + SG GQV+D
Sbjct: 132 HDINYIALSGALHAIGPADGDPVVPLNLIGDFGGGGMLLAFGVVSGLVQAKMSGTGQVVD 191
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+GSA L + W RG N LDGGA +Y Y D +AVG +E QFY
Sbjct: 192 AAMVDGSALLMAMTYGFLGQGRWQDQRGVNRLDGGAPWYRVYRCADDEHLAVGCVEPQFY 251
Query: 243 AQLLAGLGMTE--EELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A LL LG+ + E Q++VE +L E F + + W +FD +ACVTPVLS+
Sbjct: 252 ANLLRVLGLVDDPEFARQNDVEVWPLMHKRLEELFLTRPRDVWARLFDGQEACVTPVLSM 311
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHTREVLRHF 355
+A HPHNV R +F + +G+ P P PR S TP PAP G TREVL
Sbjct: 312 REALEHPHNVARRTFTRDESGIPQPMPGPRFSMTPPAHP----RPAPTVGAQTREVLVDS 367
Query: 356 GYSDANIEELIREDVIE 372
G I++L+ VI
Sbjct: 368 GLDSTAIDDLLLAGVIS 384
>gi|432340347|ref|ZP_19589791.1| alpha-methylacyl-CoA racemase [Rhodococcus wratislaviensis IFP
2016]
gi|430774628|gb|ELB90212.1| alpha-methylacyl-CoA racemase [Rhodococcus wratislaviensis IFP
2016]
Length = 364
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/333 (43%), Positives = 203/333 (60%), Gaps = 8/333 (2%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLKKAK 62
+ ++E AG+ P P +L + GA V+R+ + G P +D G++ + NLK
Sbjct: 13 VRIVELAGIGPGPHAATLLADLGADVVRVQRAGLLPTAGQPRDQTHRGRRVVEANLKDPA 72
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ ++ L ++DV++E FR GV E+L LGPDV NPRLIY R++G+GQ+GP + AG
Sbjct: 73 DIELVLGLIERADVLIEGFRPGVTERLGLGPDVALAHNPRLIYGRMTGWGQEGPLAQTAG 132
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQV+D
Sbjct: 133 HDINYISLTGVLHAIGRKGERPVPPLNMVGDFGGGSMFLVFGILAALIERHTSGKGQVVD 192
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G+ L + + W RG N+LD GA +Y+TYET DGR+MAVGA+E QFY
Sbjct: 193 AAMVDGTLALSHMMWSFRGIGRWSDERGVNMLDTGAPYYNTYETADGRYMAVGAVEPQFY 252
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPVLSLS 298
A L+ GLG+ +LP +G +L ++F E KT+ EW IFD TDAC TPVL+ +
Sbjct: 253 ALLVEGLGLDPADLPAQNDRSGWPQLQKQFAEVFLTKTRDEWAAIFDGTDACTTPVLTFA 312
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+A +PH RGS + V PAPR SR+
Sbjct: 313 EAPQNPHIAARGSLV-ELDRVTQHRPAPRFSRS 344
>gi|119475733|ref|ZP_01616086.1| hypothetical protein GP2143_17976 [marine gamma proteobacterium
HTCC2143]
gi|119451936|gb|EAW33169.1| hypothetical protein GP2143_17976 [marine gamma proteobacterium
HTCC2143]
Length = 375
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 221/368 (60%), Gaps = 8/368 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G TV+E AG+ PAP GMIL + GA +IR+D+ G GKKS+ +NLK
Sbjct: 4 LDGYTVIELAGIGPAPMGGMILADMGANLIRVDRAAGGRASDPVSGRGKKSVVLNLKDPA 63
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G+ + + ++DVI++PFR GV EKL +GP+ NP+L++AR++G+GQ+GP + AG
Sbjct: 64 GVETLLRMVEKADVIIDPFRPGVCEKLGVGPEQCLARNPKLVFARMTGWGQEGPLAQAAG 123
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L +G P PP NL D GGGG++ G++ AL E KSG GQVID
Sbjct: 124 HDINYISITGALYAIGRSGEKPVPPLNLIGDMGGGGMLLVNGVLAALLETGKSGMGQVID 183
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGE-NLLDGGAHFYDTYETKDGRFMAVGALESQF 241
MV+G+A L + +WD + E NLLDG AHFYDTYE DG ++++G++E QF
Sbjct: 184 VAMVDGAAQLMWMFHGMEPGGMWDATQRETNLLDGAAHFYDTYECSDGEYISLGSIEPQF 243
Query: 242 YAQLLAGLGMTEEEL-PQHEVETGRA---KLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA L G++E + QH+ A KL +K+QAEWCE+ + TD C PVL+
Sbjct: 244 YALLKQIAGLSEADFGSQHDRSQWPAMKEKLAAVMLQKSQAEWCELMEGTDVCFAPVLNF 303
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
A +HP NV R +++ GV PAPAPR SRTP H+ G T +VL G
Sbjct: 304 VDAAAHPANVARDTYV-EVGGVTQPAPAPRFSRTPSAVAHATHD--AGEDTDDVLTAMGL 360
Query: 358 SDANIEEL 365
+ I++L
Sbjct: 361 AQGEIDKL 368
>gi|345003363|ref|YP_004806217.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
sp. SirexAA-E]
gi|344318989|gb|AEN13677.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
sp. SirexAA-E]
Length = 383
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 214/357 (59%), Gaps = 11/357 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 12 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLGIDPAYDLTNRNKRSVLVDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +L ++DV++E +R GV E+L +GPDV + NPRL+Y R++G+GQDGP +
Sbjct: 72 KAEGGAARVLDLVARADVLIEGYRPGVAERLGVGPDVCLERNPRLVYGRMTGWGQDGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL-FERSKSGR 177
AGHD+ Y+ L+G LS++G PT P NL D+ GG L +G++ AL R+ G
Sbjct: 132 DRAGHDVAYIALTGTLSMIGAPGEPPTVPANLVGDYAGGSLYLVVGVLAALQHARTPGGT 191
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + + W RG NLLDGG FY YET DG +MAVG L
Sbjct: 192 GQVVDAAVVDGAAHLATMIHGMLAAGSWQDRRGSNLLDGGCPFYGCYETSDGGYMAVGPL 251
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E++FY + A LG+ E + ++ RA + E+F +T+AEW E+F+ TDACV PV
Sbjct: 252 EARFYERFAALLGLGEVAAARDDLTRWPQLRAAVAERFSARTRAEWTEVFEGTDACVAPV 311
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
LSL +A HPH R +F+ G+ PAPAPR S TP S + PG T EV
Sbjct: 312 LSLREAPGHPHLAARATFV-EHGGLTQPAPAPRFSATP--SGVRRPPALPGADTDEV 365
>gi|94314444|ref|YP_587653.1| alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
gi|93358296|gb|ABF12384.1| Alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
Length = 378
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/371 (41%), Positives = 227/371 (61%), Gaps = 11/371 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA----QPFVQDTVGYGKKSLCINL 58
LKGI V+E AG+AP PF M+L + GA V+ I++ A QP + + ++SL ++L
Sbjct: 4 LKGIKVVEMAGIAPGPFAAMMLADMGAEVLCIERPTAAQHCQPTASNVLHRNRRSLALDL 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K L V++ L + ++ ++E +R GVME+L LGP++ NP L+Y R++G+GQDGP +
Sbjct: 64 KNPVALRVLRRLISSANALIEGYRPGVMERLGLGPEICLADNPSLVYGRMTGWGQDGPMA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+NY+ L+G L +G R+ P P NL DFGGGG+ A G+V AL E SG G
Sbjct: 124 QAAGHDVNYISLTGALHAIGRRDAPPPIPLNLVGDFGGGGMFLAFGVVCALLEAQTSGLG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+G+A + +++ + + W RGEN+LDG A +Y YET DG++++V A E
Sbjct: 184 QVVDAAMVDGAAAMMAYMCAARASGRWSDQRGENVLDGAAPWYRVYETSDGQYISVAAAE 243
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPV 294
+FYA+LL L +++E LP +G LTE+ F +++AEW ++ + TDAC PV
Sbjct: 244 PKFYAELLRLLELSDETLPDQFDRSGWPTLTERLTTVFGTRSRAEWSKLLEGTDACFAPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL++A HPH R +FI G++ PAPAPR SRT + PA R L
Sbjct: 304 LSLAEAPGHPHLRARNTFI-EVDGIIQPAPAPRFSRTVPAQPL-PWTPA-KTDDRATLTA 360
Query: 355 FGYSDANIEEL 365
+G + I +L
Sbjct: 361 WGIDEYEISQL 371
>gi|455650284|gb|EMF29067.1| fatty acid co-A racemase [Streptomyces gancidicus BKS 13-15]
Length = 384
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 222/375 (59%), Gaps = 18/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G P +D K+S+ ++L
Sbjct: 17 LDGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGRAPLGGDPARDLTNRNKRSVVVDL 76
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K ++G + ++ LA ++D++LE +R GV E+L +GP+ +NP L+Y R++G+GQDGP +
Sbjct: 77 KTSQGPATVRALAARADILLEGYRPGVAERLGVGPEDCMAANPALVYGRMTGWGQDGPLA 136
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+AGHDI Y+ +G LS++G + P P NL D+ GG L G++ AL +G G
Sbjct: 137 PLAGHDIGYIATAGALSMMGPADGPPVFPANLLGDYAGGSLYLTTGVLAALLTARTTGHG 196
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L S W RG NLLDGG +Y Y T DG +MAVGALE
Sbjct: 197 QVVDAAIVDGTAHLTSLFWGMLAEGTWRDARGRNLLDGGCPYYAVYGTSDGGWMAVGALE 256
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
FYA ++ LG+ ++LP RA T +F T+A W +F+ TDACV PV
Sbjct: 257 PHFYAVFVSLLGLDADQLPDRTDPRNWPALRAMFTARFTTATRARWTAVFEGTDACVAPV 316
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
L+L++A H H RG++ GV PAPAPR S TPGT + PA PG HT +V R
Sbjct: 317 LTLTEAAEHKHLTARGTYT-EAHGVTQPAPAPRFSGTPGTLR---RPPAVPGAHTLDVAR 372
Query: 354 HFGYSDANIEELIRE 368
D ++ +L+++
Sbjct: 373 -----DWDVPDLLKD 382
>gi|410664246|ref|YP_006916617.1| L-carnitine dehydratase/bile acid-inducible protein F [Simiduia
agarivorans SA1 = DSM 21679]
gi|409026603|gb|AFU98887.1| L-carnitine dehydratase/bile acid-inducible protein F [Simiduia
agarivorans SA1 = DSM 21679]
Length = 383
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/377 (39%), Positives = 219/377 (58%), Gaps = 12/377 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-----PFVQDTVGYGKKSLCIN 57
L GI +LE G+ P P+ GM+L + GA VI +++ P D GK+S+ ++
Sbjct: 10 LAGIRILELKGIGPGPYAGMLLADLGAEVIVVERASKATGIGLPSAHDVHSRGKRSIALD 69
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G ++ L SD ++E FR GV E+L GPD + NP L+Y R++G+GQ GP
Sbjct: 70 LKNPAGRKLLFELVATSDALIEGFRPGVAERLGCGPDDCWQVNPGLVYGRVTGWGQSGPL 129
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+GL+G L+ +G + + P P NL D+ GG L +G++ AL + K+G+
Sbjct: 130 AHTAGHDINYIGLTGALAAMGDKQK-PALPLNLVGDYAGGSLFLVMGVLAALLDAQKTGK 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D + +G A + S + LW R NLLDG AHFYDTYET DG+FMAVG +
Sbjct: 189 GQVVDAAITDGVASMMSLFSSFNALGLWKPERAANLLDGAAHFYDTYETADGKFMAVGPI 248
Query: 238 ESQFYAQLLAGLGMTEEELPQHE---VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E QFY Q LA L + + L + + +L + F +TQAEW + F+ TDACVTPV
Sbjct: 249 EPQFYQQFLAVLAIDDPSLQSQQPADWAVNKHQLKQIFLRRTQAEWTQAFEGTDACVTPV 308
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
L +++A HPHN R +++ G+ P AP+ S ++ P+ G TR ++
Sbjct: 309 LDMAEAAVHPHNHARCAYV-EAGGINQPGVAPKFSGH--QIYVSGSRPSEGADTRALMAS 365
Query: 355 FGYSDANIEELIREDVI 371
GY +A I++L + ++
Sbjct: 366 LGYDEAAIDQLFADRIL 382
>gi|358463228|ref|ZP_09173307.1| Alpha-methylacyl-CoA racemase [Frankia sp. CN3]
gi|357070571|gb|EHI80255.1| Alpha-methylacyl-CoA racemase [Frankia sp. CN3]
Length = 411
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/367 (43%), Positives = 224/367 (61%), Gaps = 22/367 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-----DTVGYGKKSLCIN 57
L G+ V+E AG+ P P M+L + GA V+R+D+ G D + G++S+ ++
Sbjct: 20 LAGLRVVELAGIGPGPHAAMVLADLGADVVRVDRPGGGGVAGAPEAGDQLLRGRRSIVVD 79
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G + L ++DV++E +R GV E+L +GPD NPRL+Y R++G+GQDGP+
Sbjct: 80 LKDPAGRDRLLALVERADVLIEGYRPGVAERLGIGPDACLARNPRLVYGRMTGWGQDGPW 139
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ ++G+L +G ++ P P NL DFGGG + GI+ AL+ER +SG
Sbjct: 140 AHTAGHDLNYISITGVLHAIGPKDGKPAVPLNLVGDFGGGSMFLLTGILAALWERERSGA 199
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+G++ L + + + W RG N+LDGGA +YDTY DGR++AVGA+
Sbjct: 200 GQVVDSAMVDGASVLAQMMWAWRGSGFWSDVRGVNVLDGGAPYYDTYVCADGRYVAVGAI 259
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYA LLAGLG+ + LP G RA+ T F KT+ EW +FD TDACVTP
Sbjct: 260 EPQFYAALLAGLGLADAGLPGQNDRAGWPELRARFTGTFLSKTRDEWAAVFDGTDACVTP 319
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAP----GVHT 348
VL+ ++A SHPH RG+ + GV PAPAPR SRT PGT P P G T
Sbjct: 320 VLTWAEAGSHPHLAARGTLV-TVDGVEQPAPAPRFSRTIPGT-------PTPPRLKGADT 371
Query: 349 REVLRHF 355
EVL +
Sbjct: 372 DEVLADW 378
>gi|404445069|ref|ZP_11010216.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium vaccae ATCC 25954]
gi|403652859|gb|EJZ07878.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium vaccae ATCC 25954]
Length = 364
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 218/362 (60%), Gaps = 12/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-----DTVGYGKKSLCIN 57
L+G+ V+E AG+ P P MIL + GA V+RI++ G P D + ++S+ N
Sbjct: 5 LQGLRVVELAGIGPGPHAAMILGDLGADVVRIERPGKGPGPATKPGGDYLLRNRRSVAAN 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + ++ L ++DV++E FR GV E+L LGP+ K N +LIYAR++G+GQDGP
Sbjct: 65 LKSDEDREMVLRLIAKADVLIEGFRPGVTERLGLGPEDCAKVNDKLIYARMTGWGQDGPR 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ L+G L +G P PP NL DFGGG + +G++ AL+ER +SG+
Sbjct: 125 AQQAGHDINYISLNGALHAIGRAGERPVPPLNLVGDFGGGSMFLLVGVLSALYERERSGK 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+GS+ L + + +W RG N+LD GA +YDTY DGR +AVGA+
Sbjct: 185 GQVVDAAMVDGSSVLSMMMWSFRGMGMWSDERGVNMLDTGAPYYDTYTCADGRHVAVGAI 244
Query: 238 ESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYAQLLAGLG+ +LP Q+++ R T+ F + W ++F TDACVTP
Sbjct: 245 EPQFYAQLLAGLGLDPADLPDQNDMSRWPELREVFTKAFVAHDRDHWAKVFAGTDACVTP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLS ++ S HN R +F G + PAPAPR SR+ ++ PG T VL+
Sbjct: 305 VLSFAEVESEAHNTERNTFY-TENGSLYPAPAPRFSRSVPSAPTPPG--VPGADTEAVLQ 361
Query: 354 HF 355
+
Sbjct: 362 EW 363
>gi|410620978|ref|ZP_11331833.1| alpha-methylacyl-CoA racemase [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410159540|dbj|GAC27207.1| alpha-methylacyl-CoA racemase [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 348
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 206/335 (61%), Gaps = 6/335 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+GI ++E AG+ P PF M+ + GA VI + + GA +D + + ++ +LK
Sbjct: 5 LEGIRIVELAGIGPGPFAAMMFADHGAEVITVHRPGAPLNPRDPLNRSRLTVAADLKNKD 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
L ++++L N +D ++E FR GV+E+L L P L +SNP+L+ R++G+GQ+GP + AG
Sbjct: 65 DLEMVRDLINSADGLIEAFRPGVLERLDLAPGNLIQSNPKLVIGRMTGWGQNGPIAQTAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ +SG L G PTPP N DFGGG +M + AL + K+G G++ID
Sbjct: 125 HDINYIAISGALHAFGRAGEKPTPPVNTVGDFGGGAMMLVFAMTAALLKAEKTGTGEIID 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
C+MVEGS+ L S + Q+T+ W+ RG+NLLD GA FYDTYET DG +A+GALE +F+
Sbjct: 185 CSMVEGSSLLMSTVWAFQETYGWEMERGKNLLDSGAPFYDTYETLDGEHIAIGALEQEFF 244
Query: 243 AQLLAGLGMTE-----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
L+ LG+ + + L Q T+ F+ KTQ+EWC+ + DAC P+LS+
Sbjct: 245 HILMTELGLADDPCMNDHLNQKHWPRLSELFTDIFRTKTQSEWCKSLEGIDACFAPILSI 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
QA HP N R +FI + GV+ PAP+PR P
Sbjct: 305 KQAVEHPQNSARSAFI-SVNGVMQPAPSPRYQNAP 338
>gi|85709486|ref|ZP_01040551.1| hypothetical protein NAP1_11413 [Erythrobacter sp. NAP1]
gi|85688196|gb|EAQ28200.1| hypothetical protein NAP1_11413 [Erythrobacter sp. NAP1]
Length = 359
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/346 (42%), Positives = 214/346 (61%), Gaps = 8/346 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EFAG+ P P M+L + GA V+RID+ GA + V + + ++LK +
Sbjct: 8 LVGLKVIEFAGIGPGPHVAMLLADLGAEVVRIDRPGAMS-LNPIVERARNRVTVDLKTDE 66
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + ++ A+++DV++E R GVME+L LGPD L NPRL+YAR++G+GQDGP +S AG
Sbjct: 67 GKAFCRDAASKADVLIEGLRPGVMERLGLGPDELLADNPRLVYARMTGWGQDGPLASAAG 126
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L +G + P PP NL DFGGG + CA GI+ AL+ER +SG+GQV+D
Sbjct: 127 HDINYIAITGALDAIGENGKPPVPPQNLVGDFGGGSMYCAFGIMAALYERERSGKGQVVD 186
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G L S+ + RG+ LL G AHFY YE DG+ +++G++E QFY
Sbjct: 187 AAIVDGVTSLMSFFFGQAKGAVRTTERGKGLLSGAAHFYQCYECADGKEISLGSIEPQFY 246
Query: 243 AQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A++L G +EL Q +++ KL FK KTQAEW E+ + TDAC PV+ L
Sbjct: 247 AEMLTRAG-APQELAQGQMDPSNWDEYADKLAALFKTKTQAEWNELLEGTDACYGPVVGL 305
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA 343
+ HPH R +++ + G PAPAPR RTPG + + + A
Sbjct: 306 DEVREHPHMKAREAYVEHD-GDWHPAPAPRFDRTPGAVRSSADDGA 350
>gi|427817078|ref|ZP_18984141.1| putative racemase [Bordetella bronchiseptica D445]
gi|427822820|ref|ZP_18989882.1| putative racemase [Bordetella bronchiseptica Bbr77]
gi|410568078|emb|CCN16104.1| putative racemase [Bordetella bronchiseptica D445]
gi|410588085|emb|CCN03140.1| putative racemase [Bordetella bronchiseptica Bbr77]
Length = 381
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 219/369 (59%), Gaps = 13/369 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-------QPFVQDTVGYGKKSLC 55
L G+ V+EF + PAP C M+L + GATVIR+++ +P + + + +
Sbjct: 4 LAGLKVVEFPAIGPAPMCAMLLADMGATVIRLERQQPSADLGVERPLKYNLLLRNRPGIS 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK +G+ + L +DV+LE FR G ME++ GPD + NPRL+Y R++G+GQ G
Sbjct: 64 VDLKAPEGVQFAQALLESADVLLEGFRPGTMERMGFGPDACLQQNPRLVYGRMTGWGQTG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
PY++MAGHD+NY+ ++G L +G + + PTPP NL DFGGG L A+G++ A+F +
Sbjct: 124 PYAAMAGHDLNYIAMTGALDAIGRKGQPPTPPLNLVGDFGGGALYLAMGVLAAVFAARGT 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQV+D MV+G+A L + L++ RG N+LD GA +YD Y DG+++++
Sbjct: 184 GKGQVVDAAMVDGAASLMTPFFGMAAAGLFNAERGTNVLDSGAPYYDVYRCADGKYLSIA 243
Query: 236 ALESQFYAQLLAGLGMTEEELPQH-EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+ES+F LG+ Q + + R + + +TQA+WCE FD TDACV PV
Sbjct: 244 PIESRFRRIFFERLGLDAPAGDQRADWDALREAIAARIATRTQAQWCECFDGTDACVAPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV-LR 353
LS+++A SHPHN R +F+ + GVV PAPAPR TP T P P E L
Sbjct: 304 LSIAEAPSHPHNQARATFL-DIDGVVQPAPAPRFGATP---LATPRPPEPANSRFEACLG 359
Query: 354 HFGYSDANI 362
+G S A+I
Sbjct: 360 EWGMSAADI 368
>gi|403723501|ref|ZP_10945656.1| alpha-methylacyl-CoA racemase [Gordonia rhizosphera NBRC 16068]
gi|403206017|dbj|GAB89987.1| alpha-methylacyl-CoA racemase [Gordonia rhizosphera NBRC 16068]
Length = 351
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 206/331 (62%), Gaps = 8/331 (2%)
Query: 8 VLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLKKAKGL 64
++EFAG+ P P M+L + GA VIR+ + G D + G++ + NLK
Sbjct: 1 MVEFAGIGPGPHAAMMLADLGADVIRVQRPGDLTPAGRNADALLRGRRVVEANLKDPADR 60
Query: 65 SVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHD 124
+ L ++DV+LE FR GVME+L GPD L + NP L+Y R++G+GQ+GP + AGHD
Sbjct: 61 DTILGLVAKADVVLEGFRPGVMERLGFGPDKLAEINPGLVYGRMTGWGQEGPRADRAGHD 120
Query: 125 INYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCN 184
INY+ L+G+L +G ++ P PP NLA DFGGG + +G++ AL ER SGRGQV+D
Sbjct: 121 INYISLTGMLHAIGRKDDRPVPPMNLAGDFGGGSMFLVMGVLAALLERQTSGRGQVVDAA 180
Query: 185 MVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQ 244
MV+G++ LG + + +W RG N+LD GA +Y+ YET DG++MAVGA+E QFYA+
Sbjct: 181 MVDGASVLGQMMWAFRGMGMWSDTRGVNMLDTGAPYYEVYETSDGKYMAVGAIEPQFYAE 240
Query: 245 LLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
LL GLG+ + +LP KL T+ F +T+ EW ++F+ TDAC +PVL+ ++A
Sbjct: 241 LLTGLGLADADLPAQNDIANWPKLKQIFTDTFASRTRDEWAKVFEGTDACTSPVLTFAEA 300
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
S PH R + + GV+ APR SRT
Sbjct: 301 PSDPHMAARANLV-EIDGVMQAQVAPRFSRT 330
>gi|118471931|ref|YP_889967.1| alpha-methylacyl-CoA racemase [Mycobacterium smegmatis str. MC2
155]
gi|399989967|ref|YP_006570317.1| Fatty-acid-CoA racemase Far [Mycobacterium smegmatis str. MC2 155]
gi|118173218|gb|ABK74114.1| alpha-methylacyl-CoA racemase [Mycobacterium smegmatis str. MC2
155]
gi|399234529|gb|AFP42022.1| Fatty-acid-CoA racemase Far [Mycobacterium smegmatis str. MC2 155]
Length = 360
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 214/337 (63%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L G+ V+E G+ P P M+L++ GA V+R+ + G + V GK+ + +++K
Sbjct: 7 LSGVRVVELGGIGPGPHAAMMLSDLGADVVRVRRPGGLTLPAENVDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + +L ++DV+L+ FR G E+L +GP NPRLI+AR++G+GQDGP +
Sbjct: 67 AEP--AKLLDLVAKADVLLDCFRPGTCERLGIGPKECEAVNPRLIFARITGWGQDGPLAQ 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G LS +G+R+R P P NL ADFGGG ++ +GIV AL+ER +SG+GQ
Sbjct: 125 TAGHDINYLSQTGALSAIGYRDRPPVAPMNLVADFGGGSMLVLVGIVSALYERERSGKGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + T R LLDGGA FY YET DG +MAVG++E
Sbjct: 185 VIDAAMVDGVSMLAQMMWTMRATGSLRDERESFLLDGGAPFYRCYETADGGYMAVGSIEP 244
Query: 240 QFYAQLLAGLGMTEEELP-QHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+AQL+AGLG+ +E+P Q E+ + R TE+FK KT+AEW EIF TDACVTPVL
Sbjct: 245 QFFAQLVAGLGLAADEIPGQFEIGRYDEMRKIFTERFKTKTRAEWTEIFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ +A + H R + I + GV APAPR SRTP
Sbjct: 305 TWGEAAENAHLRERSTLI-DVDGVAQAAPAPRFSRTP 340
>gi|29828224|ref|NP_822858.1| fatty acid-CoA racemase [Streptomyces avermitilis MA-4680]
gi|29605326|dbj|BAC69393.1| putative fatty acid-CoA racemase [Streptomyces avermitilis MA-4680]
Length = 397
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 216/362 (59%), Gaps = 12/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 24 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLAIAPEYDVTNRNKRSVIVDL 83
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +LA ++D+++E +R GV E+L +GP+ NP+L+Y R++G+GQ+GP +
Sbjct: 84 KAEHGPAGVLDLAERADILIEGYRPGVAERLGVGPEACHARNPKLVYGRMTGWGQEGPLA 143
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L ++G + P P NL D+ GG L +G++ AL +G G
Sbjct: 144 QRAGHDIAYIALTGTLGMIGNPDEPPAIPANLVGDYAGGSLYLVVGVLAALHHARATGTG 203
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TYET DG++MAVGALE
Sbjct: 204 QVVDAAIVDGAAHLAAMIHGMLAAGGWQDQRGANLLDGGCPFYGTYETADGQYMAVGALE 263
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+ + LG+ +E + +V R + +FK +T+ EW +F+ +DACV PVL
Sbjct: 264 QQFYAEFVELLGIGDEAPSRKDVSRWSELRETVAARFKTRTRDEWTAVFEGSDACVAPVL 323
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SL +A +HPH RG+F + G+ PAPAPR S T PA PG H +V R
Sbjct: 324 SLREAPAHPHLAARGTFT-DHGGITQPAPAPRFS---ATRTAVRSGPAQPGAHVEDVARE 379
Query: 355 FG 356
+G
Sbjct: 380 WG 381
>gi|433608532|ref|YP_007040901.1| hypothetical protein BN6_67910 [Saccharothrix espanaensis DSM
44229]
gi|407886385|emb|CCH34028.1| hypothetical protein BN6_67910 [Saccharothrix espanaensis DSM
44229]
Length = 376
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/375 (45%), Positives = 233/375 (62%), Gaps = 10/375 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-DTVGYGKKSLCINLKKA 61
L G+ V+E AGLAPAPF M+L + GA+V+R+D+ P V D +G G++S+ ++ ++
Sbjct: 5 LAGLRVVELAGLAPAPFGCMVLADLGASVVRVDRVSGGPAVPGDVLGRGRRSIGVDTRRP 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G V+ L ++DV++E FR GV E+L LGP N RL+Y RL+G+GQDGP + A
Sbjct: 65 AGAEVVLKLVERADVLVEGFRPGVTERLGLGPAHCLARNRRLVYGRLTGWGQDGPLADRA 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ L+G L +G PT P N+ DFGGGGL+ ALG++ AL+ER +SGRGQV+
Sbjct: 125 GHDLNYIALAGALEPIGRAGAPPTVPLNVVGDFGGGGLLLALGVLAALYERERSGRGQVV 184
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+G+A L ++L + W RG NLLDGGA FYD Y T DG+++++GALE +F
Sbjct: 185 DAAMVDGAALLTTFLHGMKAAGAWSGERGTNLLDGGAPFYDVYATSDGKYVSIGALEDKF 244
Query: 242 YAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPVLSL 297
YA+LL LG+ + E+P L E+ + + EW TDAC+ PVLS
Sbjct: 245 YAELLVVLGLADAEVPNRHDPAQWPALRERIAAVVATRKRDEWAARAAGTDACLVPVLSP 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP-GTSKITEHNPAPGVHTREVLRHFG 356
+A + PHN RG+F+ G+ PAPAPR RTP GT + PA G HT EVL G
Sbjct: 305 EEAPAAPHNTARGTFV-EVGGLPQPAPAPRFDRTPAGTPSVP---PAVGQHTIEVLAELG 360
Query: 357 YSDANIEELIREDVI 371
+A I EL R V+
Sbjct: 361 LPEAEIAELRRAGVV 375
>gi|397678671|ref|YP_006520206.1| hypothetical protein MYCMA_0433 [Mycobacterium massiliense str. GO
06]
gi|418250937|ref|ZP_12877149.1| fatty-acid-CoA racemase Far [Mycobacterium abscessus 47J26]
gi|420930033|ref|ZP_15393310.1| fatty-acid-CoA racemase [Mycobacterium massiliense 1S-151-0930]
gi|420938709|ref|ZP_15401978.1| fatty-acid-CoA racemase [Mycobacterium massiliense 1S-152-0914]
gi|420940280|ref|ZP_15403545.1| fatty-acid-CoA racemase [Mycobacterium massiliense 1S-153-0915]
gi|420946220|ref|ZP_15409473.1| fatty-acid-CoA racemase [Mycobacterium massiliense 1S-154-0310]
gi|420950457|ref|ZP_15413703.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0626]
gi|421000858|ref|ZP_15463991.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0912-S]
gi|353449562|gb|EHB97959.1| fatty-acid-CoA racemase Far [Mycobacterium abscessus 47J26]
gi|392140145|gb|EIU65875.1| fatty-acid-CoA racemase [Mycobacterium massiliense 1S-151-0930]
gi|392144224|gb|EIU69949.1| fatty-acid-CoA racemase [Mycobacterium massiliense 1S-152-0914]
gi|392156712|gb|EIU82412.1| fatty-acid-CoA racemase [Mycobacterium massiliense 1S-153-0915]
gi|392159428|gb|EIU85124.1| fatty-acid-CoA racemase [Mycobacterium massiliense 1S-154-0310]
gi|392160234|gb|EIU85925.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0626]
gi|392203012|gb|EIV28608.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0912-S]
gi|395456936|gb|AFN62599.1| Uncharacterized protein YfdE [Mycobacterium massiliense str. GO 06]
Length = 363
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 213/337 (63%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKA 61
L G+ V+E G+ P P M+L++ GA VIR+ + G ++T + + +NL
Sbjct: 11 LAGVKVIELGGIGPGPHAAMMLSDLGADVIRVRRPGGLAIPAEETDLFHRGKRLVNLDVK 70
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
K + L +++DV+L+PFR GV E++ +GPD K NPRLI+AR++G+GQ GP + A
Sbjct: 71 KDPEALLALVDKADVLLDPFRPGVCERIGIGPDECAKRNPRLIFARMTGWGQHGPMADRA 130
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL L+G L +G+++R P PP NL ADFGGG ++ GI+ AL+ER KSG+GQVI
Sbjct: 131 GHDINYLSLTGALGSMGYKDRPPMPPMNLVADFGGGSMLLVQGILAALYEREKSGKGQVI 190
Query: 182 DCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
D MV+G + L W T + L+D+ R LLDGG+ FY TYET DG++MAVG++E
Sbjct: 191 DGAMVDGVSQLAQMQW-TMYNNGLLFDE-REAGLLDGGSPFYGTYETSDGKYMAVGSIEP 248
Query: 240 QFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A L+ GLG+ E +P + R + FK KT+ EW EIF TDACV+PVL
Sbjct: 249 QFFAILVQGLGLDPESVPFQLDKARYPEMRKMFDDAFKTKTRDEWTEIFIGTDACVSPVL 308
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ +A + H RG+ + + GV APAPR SRTP
Sbjct: 309 TWGEAKQNEHLRDRGTIV-DVDGVTQAAPAPRFSRTP 344
>gi|365880096|ref|ZP_09419480.1| putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp. ORS
375]
gi|365291881|emb|CCD92011.1| putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp. ORS
375]
Length = 370
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 207/341 (60%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LAGFRIVEFAGIGPGPFACMLLADMGAEVVTLDRVGARKTMKSVAGRGRKVIELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ+GP + AG
Sbjct: 77 VIAEVLELLAGADALIEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQEGPLAHAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + R P PP NL DFGGG L +G++ AL E SKSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGPKER-PVPPLNLVGDFGGGALYLVVGVLAALLEASKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 TAMCDGAASLLAMFFDLTAMGRWTERRERNFLDGGAHFYGVYECACGNFISIGSIEPQFY 255
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L +++ L EK FK KT+ EWC+I + TD C PVL++S
Sbjct: 256 ALLRQHADLSDPAFDAQMDPRAWPALKEKLVGVFKSKTREEWCQIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+A H H RG F+ R GV PAPAPR SRTP T + E
Sbjct: 316 EAPKHAHMAARGVFV-ERHGVTQPAPAPRFSRTPSTIREPE 355
>gi|406698692|gb|EKD01923.1| hypothetical protein A1Q2_03777 [Trichosporon asahii var. asahii
CBS 8904]
Length = 371
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 215/333 (64%), Gaps = 15/333 (4%)
Query: 22 MILNEFGATVIRIDKH---GAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVIL 78
M+L + GATV+R+D+ A +D + K+S+ ++LK+ G++++K LA ++DV++
Sbjct: 1 MLLADAGATVLRVDRASPAAAAVPTKDMLARHKQSVVVDLKQPAGVALVKKLAERADVLI 60
Query: 79 EPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLG 138
+PFR GV+EKL LGP L ++NP+LIYAR++G+ +DG YS+MAGHDINYL +SG+LS+LG
Sbjct: 61 DPFRPGVLEKLGLGPKPLLEANPKLIYARMTGFRRDGKYSAMAGHDINYLAVSGVLSMLG 120
Query: 139 WRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTR 198
P PP N+ DF GGG + GI++AL R SG+GQV++ NMV+G++YL S
Sbjct: 121 RAGDKPHPPTNILGDFAGGGAVLFQGILLALLSRGVSGKGQVVEANMVDGASYLSSMPRM 180
Query: 199 TQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGM----TEE 254
Q T L PRG N+LDGG FYDTYET+DG+++AVG+LE QF+ +++ G G+ +
Sbjct: 181 GQKTPLGAGPRGTNMLDGGCPFYDTYETRDGKYVAVGSLEPQFFREMIKGTGLDPSWAKR 240
Query: 255 ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIP 314
+ E +T R ++TE FK KT+AEW +IFD TDACVTPVL S+ P R
Sbjct: 241 QQNLDEWDTLRQQMTEAFKSKTRAEWEKIFDGTDACVTPVLEYSELEGKPEGDQR----- 295
Query: 315 NRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH 347
+V P L+ TPG + PGV
Sbjct: 296 ---PIVTLRNTPLLAVTPGANGDPAKGQGPGVK 325
>gi|443671485|ref|ZP_21136593.1| Alpha-methylacyl-CoA racemase [Rhodococcus sp. AW25M09]
gi|443415943|emb|CCQ14930.1| Alpha-methylacyl-CoA racemase [Rhodococcus sp. AW25M09]
Length = 358
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/333 (45%), Positives = 207/333 (62%), Gaps = 6/333 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E AG+ P P ++L + GA V+R+ + G Q D + + NLK
Sbjct: 8 LAGLKVVELAGIGPGPHAALLLADLGADVVRVQRAG-QISPDDHQLRSRTIVEANLKDPA 66
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ + L ++DV++E FR GV E+L LGPD NPRL+Y R++G+GQ+GP++ AG
Sbjct: 67 DIEKVLGLIERADVLIEGFRPGVTERLGLGPDDALARNPRLVYGRMTGWGQEGPWAQTAG 126
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G+L+ +G P PP N+ DFGGG + GI+ AL+ER SG+GQV+D
Sbjct: 127 HDINYISVTGVLNAIGRAGERPVPPMNMVGDFGGGSMFLVFGIMAALYERQSSGQGQVVD 186
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G+A L + + W RG NLLD GA FYDTYET DG +MAVG+LE QFY
Sbjct: 187 AAMVDGTAALSHMIWAWRGVGAWSDERGTNLLDTGAPFYDTYETSDGGYMAVGSLEPQFY 246
Query: 243 AQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
AQLL GLG+T+ +LP ++ R K T F KT+ EW IFD TDACV+PVL+ +
Sbjct: 247 AQLLTGLGLTDADLPSQMDKSRWPELREKFTTTFLSKTRDEWAGIFDGTDACVSPVLTFA 306
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+A +HPH R S I + GV PAPR SRT
Sbjct: 307 EAPNHPHMKDRDSLI-DVGGVTQHRPAPRFSRT 338
>gi|240277680|gb|EER41188.1| isopenicillin N-CoA epimerase [Ajellomyces capsulatus H143]
gi|325093765|gb|EGC47075.1| isopenicillin N-CoA epimerase [Ajellomyces capsulatus H88]
Length = 398
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/314 (49%), Positives = 210/314 (66%), Gaps = 22/314 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----------PFVQDTVGYGKK 52
LK I VLE AGLAPAPF G++L ++GA+V+RID+ Q P D++ K
Sbjct: 9 LKDIRVLELAGLAPAPFAGLLLADYGASVLRIDRPHPQAHSNPPGTLPPETSDSLTRHKT 68
Query: 53 SLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGY 111
S+ I+LK L+++ +L + +D++++PFR GV+E+L L P DVL K NPRLI AR++G+
Sbjct: 69 SISIDLKSPASLALLLSLISHADILIDPFRPGVLERLGLSPTDVLLKRNPRLIVARIAGF 128
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
+DG Y MAGHDINY+ +SG+L+LLG P PP N+ DF GGG MC LGI++AL
Sbjct: 129 RRDGKYKDMAGHDINYIAVSGVLALLGRAGERPYPPGNIVGDFAGGGAMCFLGILLALLS 188
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GR 230
R ++G+GQV++ NMV+GSAYL ++ Q +W PRG+N+LDGG +YDTYETKD G+
Sbjct: 189 RHRTGKGQVVEANMVDGSAYLATFPRLLQKRPMWGSPRGQNVLDGGCPYYDTYETKDVGK 248
Query: 231 FMAVGALESQFYAQLLAGLGMTEEE-LP------QHEVETG---RAKLTEKFKEKTQAEW 280
+ AVGALE +F+A LL GL + E+ LP + + T R T KFKE+T+ EW
Sbjct: 249 YFAVGALEPEFFAALLKGLSLKLEDILPPGSSGLREDPSTWPYMRDVFTRKFKERTRREW 308
Query: 281 CEIFDNTDACVTPV 294
IFD TDAC TPV
Sbjct: 309 ESIFDGTDACATPV 322
>gi|302866632|ref|YP_003835269.1| L-carnitine dehydratase/bile acid-inducible protein F
[Micromonospora aurantiaca ATCC 27029]
gi|302569491|gb|ADL45693.1| L-carnitine dehydratase/bile acid-inducible protein F
[Micromonospora aurantiaca ATCC 27029]
Length = 386
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/378 (43%), Positives = 228/378 (60%), Gaps = 13/378 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH--GAQPFV---QDTVGYGKKSLCIN 57
L G+ V+E AG+ P PF M+L + GA V+R+D+ GA P ++ + GK+S+ ++
Sbjct: 5 LDGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPEPGALPAGDPGRNLLNRGKRSIVVD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G V+ LA ++ +++E +R GV E+L +GP+ NP L+Y R++G+GQDGP
Sbjct: 65 LKHPDGAEVVLALAGRAAILIEGWRPGVAERLGVGPEAALARNPGLVYGRMTGWGQDGPL 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI Y+ ++G L +G P P NL DFGGG L +GI+ AL + +GR
Sbjct: 125 ARAAGHDIGYIAVAGALHPIGRAGGPPQIPLNLVGDFGGGSLYLVVGILAALHVAAATGR 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + W RG NLLDGGA FYD Y T DG MAVGAL
Sbjct: 185 GQVVDAAIVDGAAHLTTPFAGMLAQGTWRPERGRNLLDGGAPFYDVYATADGGHMAVGAL 244
Query: 238 ESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYA+LL LG+ +LP QH+V RA+ E F +T+ EW +FD TDACV P
Sbjct: 245 EPQFYAELLRLLGLAGADLPAQHDVAGWPVLRARFAEVFAGRTRDEWTAVFDGTDACVAP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLSL++A HPH RG++ GV PA APRLS TPG ++ PAPG T VL
Sbjct: 305 VLSLTEAPGHPHLAARGTY-EEHFGVRQPAVAPRLSGTPG--RVGGPPPAPGADTEPVLT 361
Query: 354 HFGYSDANIEELIREDVI 371
+G A++ + + V+
Sbjct: 362 DWGLG-AHLPRWLDDGVV 378
>gi|315503040|ref|YP_004081927.1| l-carnitine dehydratase/bile acid-inducible protein f
[Micromonospora sp. L5]
gi|315409659|gb|ADU07776.1| L-carnitine dehydratase/bile acid-inducible protein F
[Micromonospora sp. L5]
Length = 386
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/378 (43%), Positives = 227/378 (60%), Gaps = 13/378 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH--GAQPFV---QDTVGYGKKSLCIN 57
L G+ V+E AG+ P PF M+L + GA V+R+D+ GA P ++ + GK+S+ ++
Sbjct: 5 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPEPGALPAGDPGRNLLNRGKRSIVVD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G V+ LA ++ +++E +R GV E+L +GP+ NP L+Y R++G+GQDGP
Sbjct: 65 LKHPDGAEVVLALAGRAAILIEGWRPGVAERLGVGPEAALARNPGLVYGRMTGWGQDGPL 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI Y+ ++G L +G P P NL DFGGG L +GI+ AL +GR
Sbjct: 125 ARAAGHDIGYIAVAGALHPIGRAGGPPQIPLNLVGDFGGGSLYLVVGILAALHVAGATGR 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + W RG NLLDGGA FYD Y T DG MAVGAL
Sbjct: 185 GQVVDAAIVDGAAHLTTPFAGMLAQGTWRPERGRNLLDGGAPFYDVYATADGGHMAVGAL 244
Query: 238 ESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYA+LL LG+ +LP QH+V RA+ E F +T+ EW +FD TDACV P
Sbjct: 245 EPQFYAELLRLLGLAGADLPAQHDVAGWPVLRARFAEVFAGRTRDEWTAVFDGTDACVAP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLSL++A HPH RG++ GV PA APRLS TPG ++ PAPG T VL
Sbjct: 305 VLSLTEAPGHPHLAARGTY-EEHFGVRQPAVAPRLSGTPG--RVGGPPPAPGADTEPVLT 361
Query: 354 HFGYSDANIEELIREDVI 371
+G A++ + + V+
Sbjct: 362 DWGLG-AHLPRWLDDGVV 378
>gi|389750059|gb|EIM91230.1| CoA-transferase family III [Stereum hirsutum FP-91666 SS1]
Length = 431
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/427 (40%), Positives = 249/427 (58%), Gaps = 53/427 (12%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------DTVGYGKKSLC 55
L G+ V+EFAGLAP PF G+IL++FGA+V RID+ P D + GK+S+
Sbjct: 10 LSGLKVVEFAGLAPGPFAGLILSDFGASVTRIDRFHPSPSSSSADTKEADLLCRGKRSIA 69
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPR-------LIYARL 108
+NLK KGL V+K++ +DV+++PFR GV+E++ LGP+V L++ARL
Sbjct: 70 VNLKNEKGLEVVKHIVRGADVVIDPFRPGVLERMGLGPEVWLDDGQGGNGENEGLVFARL 129
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+G+ DGP+ MAGHDINYL LSGILS+L + P+ P NL ADF GGGL CA+GI++A
Sbjct: 130 AGFRTDGPHRDMAGHDINYLALSGILSMLPGTSEKPSFPLNLLADFAGGGLTCAMGILIA 189
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGS--WLTRTQDTFLWD---KPRGENLLDGGAHFYDT 223
LFERS+SGRGQV++ +MV G+ YL + +L T ++ +PR N+LDGGA FY+
Sbjct: 190 LFERSRSGRGQVVNTDMVSGTRYLSTFPFLHSALLTPIFSTPRQPRQTNVLDGGAPFYNI 249
Query: 224 YETKDGRFMAVGALESQFYA----QLLAGLGMTEEELPQHEVETG--------------- 264
Y KDGR+++VG LE +F+ + L LG EE + Q+ + G
Sbjct: 250 YTCKDGRYVSVGCLEPRFFKVFWEKFLTALG--EEWVVQNRGDMGVDLGIQGRKKDWELL 307
Query: 265 RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPA- 323
+ + + F+ K + EW +F TDACV PVL+ +A R S P G +P
Sbjct: 308 KTFMEKGFRLKGRDEWATLFYGTDACVVPVLTPEEAAIL---ASRSSTSPASFGTPSPVP 364
Query: 324 -PAPRLSRTPGTSKITEHNPA---PGVHTREVLRHFGYSDANIEELIREDVI-----EET 374
PAP LSRTP + + ++ + G HT EVLR G + + L++E V+ E
Sbjct: 365 NPAPFLSRTPASVDTSINSLSLLQAGEHTYEVLRELGMQENEVVALVKEGVVGGPSGERR 424
Query: 375 IEMNSKL 381
+E +KL
Sbjct: 425 LERGAKL 431
>gi|225557134|gb|EEH05421.1| isopenicillin N-CoA epimerase [Ajellomyces capsulatus G186AR]
Length = 398
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 211/314 (67%), Gaps = 22/314 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----------PFVQDTVGYGKK 52
LK I VLE AGLAPAPF G++L ++GA+V+RID+ Q P D++ K
Sbjct: 9 LKDIRVLELAGLAPAPFAGLLLADYGASVLRIDRPHPQAHSNPPGTLPPETSDSLTRHKT 68
Query: 53 SLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGY 111
S+ I+LK L+++ +L + +D++++PFR GV+E+L L P D+L K NPRLI AR++G+
Sbjct: 69 SISIDLKSPASLALLLSLISHADILIDPFRPGVLERLGLSPTDMLLKRNPRLIVARMAGF 128
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
+DG Y MAGHDINY+ +SG+L+LLG P PP N+ DF GGG MC LGI++AL
Sbjct: 129 RRDGKYKDMAGHDINYIAVSGVLALLGRAGERPYPPGNIVGDFAGGGAMCFLGILLALLS 188
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GR 230
R ++G+GQV++ NMV+GSAYL ++ Q +W PRG+N+LDGG +YDTYETKD G+
Sbjct: 189 RHRTGKGQVVEANMVDGSAYLATFPRLLQKRPMWGSPRGQNVLDGGCPYYDTYETKDVGK 248
Query: 231 FMAVGALESQFYAQLLAGLGMTEEE-LP------QHEVETG---RAKLTEKFKEKTQAEW 280
+ AVGALES+F+A LL GL + E+ LP + + T R T +FKE+T+ EW
Sbjct: 249 YFAVGALESEFFAALLKGLSLKLEDILPPGSSGLREDPSTWPYMRDVFTRRFKERTRREW 308
Query: 281 CEIFDNTDACVTPV 294
IFD TDAC TPV
Sbjct: 309 ESIFDGTDACATPV 322
>gi|452964933|gb|EME69964.1| acyl-CoA transferase/carnitine dehydratase [Magnetospirillum sp.
SO-1]
Length = 378
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/367 (42%), Positives = 218/367 (59%), Gaps = 13/367 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ--DTVGYGKKSLCINLKK 60
L + V+E AGL APFC M+L + GA VIR+D+ A+ D + G++S+ ++LKK
Sbjct: 4 LADLKVVELAGLGAAPFCAMLLADLGADVIRVDRSDARGKGSSFDILNRGRRSVALDLKK 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G++ L Q+D++LE FR GVME+L LGP+ +NPRL+Y R++G+GQ+GP +
Sbjct: 64 PAGIAATMRLVGQADILLEGFRPGVMERLGLGPEHCLTANPRLVYGRMTGWGQEGPLAKA 123
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+L +G + P PP NL D+GG LM A G+V A+ E SG GQV
Sbjct: 124 AGHDINYISLTGVLEAIGTNSAKPVPPLNLVGDYGGAMLM-AFGLVSAVLEAKSSGLGQV 182
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D M++ +A + W R N LDGGAHFYDTY DGR +AVG +E Q
Sbjct: 183 VDGAMLDAAALTMNRFLGLHAEGKWRLSRQSNYLDGGAHFYDTYACADGRHVAVGPIEPQ 242
Query: 241 FYAQLLAGLGMTEEELPQHEVET-----GRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY QLL LG+ E P H+++ + L F KT+ EW ++ + TDACV+P+L
Sbjct: 243 FYRQLLERLGV--ELDPSHQLDAQTWPEQKQILAHAFMGKTRDEWTDLLEGTDACVSPIL 300
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
L +A HPHN R +F + GV+ APAPR SRT +++ P G H + L +
Sbjct: 301 DLVEAPEHPHNAARQTF-RSLDGVIQAAPAPRFSRT--HAELDLPPPQAGQHDEQALSRW 357
Query: 356 GYSDANI 362
G S I
Sbjct: 358 GVSTEEI 364
>gi|345010449|ref|YP_004812803.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
violaceusniger Tu 4113]
gi|344036798|gb|AEM82523.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
violaceusniger Tu 4113]
Length = 383
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 219/364 (60%), Gaps = 11/364 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-----DTVGYGKKSLCIN 57
L G+ V+E AG+ P PF M+L + GA V+R+D+ G ++ D K+S+ ++
Sbjct: 15 LAGVRVVELAGIGPGPFAAMVLADLGADVVRVDRPGGAGGLRIDPDHDLTNRNKRSVLLD 74
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK ++ + +L ++D+++E +R GV EKL LGP+ NPRL+Y R++G+GQ+GP
Sbjct: 75 LKADGSVATVLDLVERADILIEGYRPGVTEKLGLGPEDCLARNPRLVYGRMTGWGQEGPL 134
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI Y+ ++G LS++G + P P NL D+ GG L +G++ AL G
Sbjct: 135 ARTAGHDIGYIAVTGALSMIGAADGPPIAPANLLGDYAGGSLYLVIGVLAALQHARAGGP 194
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L S + W RG NLLDGG FY TYET DG +MAVG L
Sbjct: 195 GQVVDAAIVDGTAHLTSAIHGMMAAGGWRDQRGTNLLDGGCPFYGTYETADGGYMAVGPL 254
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E +FYA+ + LG+ ++ + + ++ RA + ++FK++ + EW +F +DACV PV
Sbjct: 255 ERKFYAEFIELLGIADQAPARDDFDSWAALRAAIADRFKQRDREEWTAVFSASDACVAPV 314
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL +A +HPH R +F+ + G+ PAPAPR S TPG + PG T EV R
Sbjct: 315 LSLREAPAHPHLAARSTFV-DHGGITQPAPAPRFSATPGAVRRAPVR--PGADTAEVARD 371
Query: 355 FGYS 358
+G +
Sbjct: 372 WGVT 375
>gi|432341251|ref|ZP_19590618.1| fatty acid-CoA racemase [Rhodococcus wratislaviensis IFP 2016]
gi|430773713|gb|ELB89374.1| fatty acid-CoA racemase [Rhodococcus wratislaviensis IFP 2016]
Length = 395
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/383 (42%), Positives = 233/383 (60%), Gaps = 16/383 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-------GKKSLC 55
L G+ V+E + P PFC M+L + GA VIR+D+ V + G++SL
Sbjct: 14 LAGLKVVEIGSIGPGPFCAMLLADLGADVIRVDRATGSGLVGPNADFRTELLHRGRRSLA 73
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G +V+ +L +DV++E FR GV E+L +GPD + N RLIY R++G+GQDG
Sbjct: 74 VDLKHPDGAAVVLSLVADADVLIEGFRPGVAERLGIGPDDCAQRNARLIYGRMTGFGQDG 133
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + GHDINY+ LSG LSL+G + + PTPP +L DFGGGG++ ALG++ ALFER +S
Sbjct: 134 PLAQHVGHDINYVALSGALSLIGRQGQPPTPPLSLIGDFGGGGMLLALGVLSALFERQRS 193
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQV+D +MVEG+A L + T +W + RG N++D GA +YD YET DG+++AVG
Sbjct: 194 GLGQVVDASMVEGAALLATPFFGFAQTGVWGE-RGTNIVDSGAPYYDAYETADGKWLAVG 252
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACV 291
ALE FYA L+A L + ++LP + ++ + F + +T EW E + C+
Sbjct: 253 ALEPHFYADLVALLELP-DDLPDQNDRSQWPQMKKVFADAVRGRTLTEWLEAGEGLTPCI 311
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVL + +A SHPH+V R +F+ + G+V PAPAPR SRT T + P PG HT E+
Sbjct: 312 LPVLEVDEAPSHPHHVARNAFV-DVDGLVQPAPAPRFSRTAAT--VDRRPPMPGEHTTEI 368
Query: 352 LRHFGYSDANIEELIREDVIEET 374
L +G + +R + E
Sbjct: 369 LTDWGIDPGRSADWLRSGAVREA 391
>gi|111224158|ref|YP_714952.1| fatty acid-CoA racemase [Frankia alni ACN14a]
gi|111151690|emb|CAJ63409.1| Putative fatty acid-CoA racemase [Frankia alni ACN14a]
Length = 352
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 211/350 (60%), Gaps = 12/350 (3%)
Query: 11 FAGLAPAPFCGMILNEFGATVIRIDKH---GAQPFVQDTVGYGKKSLCINLKKAKGLSVM 67
AG+ PAPF +L E GA VIR+DK G QP D + G+ S+ ++LK + +
Sbjct: 1 MAGIGPAPFAATLLTELGADVIRVDKPATVGTQP---DWLTRGRPSVALDLKNPDEHAGL 57
Query: 68 KNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINY 127
+L + + V +E +R GV E+L LGPD L NP L+Y R++G+GQ+GP+S AGHDINY
Sbjct: 58 LDLIDAAHVFIEGYRPGVTERLGLGPDALLARNPALVYGRMTGWGQEGPWSRSAGHDINY 117
Query: 128 LGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVE 187
+ ++G L +G P P NL DFGGG L +GI+ AL E SGRGQV+DC +V+
Sbjct: 118 VAITGALGAIGRAGGPPQVPLNLVGDFGGGALYLVVGILAALHEARGSGRGQVVDCAIVD 177
Query: 188 GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLA 247
G A L + + W +PRG N+LD G +YD YET DG + +VGA+E+QFYA+L+
Sbjct: 178 GVASLSAMMWSMISRKEWGEPRGTNMLDTGRPWYDVYETADGGWFSVGAIEAQFYARLVE 237
Query: 248 GLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHP 304
LG+ E Q++ RA F +T+AEW ++F+ TDAC PVLS S+A +HP
Sbjct: 238 LLGLPEWADAQNDASRWPQMRAAFATVFASRTRAEWEQVFNGTDACAAPVLSWSEARAHP 297
Query: 305 HNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
H R F+ + VAPAPAPR SRTPG ++ E PA G T +R
Sbjct: 298 HLAAREVFV-DLGDEVAPAPAPRFSRTPG--RVAEMGPAVGSSTLAQVRQ 344
>gi|377557584|ref|ZP_09787226.1| alpha-methylacyl-CoA racemase [Gordonia otitidis NBRC 100426]
gi|377525279|dbj|GAB32391.1| alpha-methylacyl-CoA racemase [Gordonia otitidis NBRC 100426]
Length = 383
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 213/342 (62%), Gaps = 9/342 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG--AQPFVQ-DTVGYGKKSLCINLK 59
L GI V+EFAG+ P P M+L + GA VIRI + G + P D + G++ + +LK
Sbjct: 28 LNGIRVVEFAGIGPGPHAAMMLADLGADVIRIQRPGQLSDPARNADALLRGRRVVEADLK 87
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L ++DV+LE FR GVME+L GP + N RL+Y R++G+GQDGP +
Sbjct: 88 DPADREEILRLIGKADVLLEGFRPGVMERLGFGPSDVESVNERLVYGRMTGWGQDGPRAR 147
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L +G P PP NL DFGGG + +G++ AL ER+ SGRGQ
Sbjct: 148 QAGHDINYISLTGMLHAIGRAGERPVPPMNLVGDFGGGSMFLVMGVLAALVERASSGRGQ 207
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++ LG + + T LW G N+LD GA +Y+ YET DGR+MAVGA+E
Sbjct: 208 VVDAAMVDGASVLGQMIWAFRGTGLWRDEHGTNMLDTGAPYYEVYETSDGRYMAVGAIEP 267
Query: 240 QFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA++L GLG+T+ +LP Q++V + + TE F +T+ EW ++F+ TDACV+PVL
Sbjct: 268 QFYAEMLRGLGLTDADLPDQNDVSSWPRLKEIFTETFASRTRDEWAKVFEGTDACVSPVL 327
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR-TPGTSK 336
+ ++A PH R + + V APR SR TP T +
Sbjct: 328 TFAEAPDDPHMAARANLV-EIDDVRQAQVAPRFSRTTPSTPR 368
>gi|444430871|ref|ZP_21226042.1| alpha-methylacyl-CoA racemase [Gordonia soli NBRC 108243]
gi|443887920|dbj|GAC67763.1| alpha-methylacyl-CoA racemase [Gordonia soli NBRC 108243]
Length = 374
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 207/340 (60%), Gaps = 9/340 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
LK I V+EFAG+ P P M+L + GA V+R+ + G+ P D + G++ + NLK
Sbjct: 19 LKAIRVIEFAGIGPGPHAAMLLADLGADVVRVQRPGSLPSPDRNADALLRGRRVVEANLK 78
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L ++DV+LE FR GVME+L GPD L K N L+Y R++G+GQ+GP ++
Sbjct: 79 DPADRETILGLVAKADVVLEGFRPGVMERLGFGPDDLEKVNAGLVYGRMTGWGQEGPRAN 138
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHDINY+ L+G+L +G PTPP NL DFGGG + +G++ AL ER SGRGQ
Sbjct: 139 LAGHDINYISLTGMLHAIGRSEDRPTPPLNLVGDFGGGSMFLVVGVLAALQERQTSGRGQ 198
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G++ LG + + T LW RG NLLD GA +Y+ YET DG++MAVGA+E
Sbjct: 199 VIDAAMVDGASVLGQMMWAFRGTGLWSDRRGANLLDTGAPYYEVYETSDGKWMAVGAIEP 258
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQA----EWCEIFDNTDACVTPVL 295
QFYA+LL GL +T+ +LP TG L + F EW ++FD TDAC +PVL
Sbjct: 259 QFYAELLKGLELTDADLPDQNDVTGWPTLKDTFTRTFATRTRDEWAKVFDGTDACTSPVL 318
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGT 334
+A PH R + + GV APR SRT PGT
Sbjct: 319 DFVEAGEDPHMSARQNLV-EIDGVQQAQVAPRFSRTAPGT 357
>gi|288923699|ref|ZP_06417799.1| Alpha-methylacyl-CoA racemase [Frankia sp. EUN1f]
gi|288344947|gb|EFC79376.1| Alpha-methylacyl-CoA racemase [Frankia sp. EUN1f]
Length = 384
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 213/375 (56%), Gaps = 18/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFVQDTVGYGKKSLCINL 58
L G+ VLE +G+ P PF IL + GA V+RID+ G P D + ++S ++L
Sbjct: 11 LLGVRVLELSGIGPGPFAASILGDLGADVVRIDRPGGSTTGIPEELDALRRSRRSAALDL 70
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
+ G+ + + +DV++E +R GV E+L GP+ NPRL+Y R++G+GQDGP +
Sbjct: 71 RDPVGVDALMTMVESADVLIEGYRPGVAERLGFGPEACATRNPRLVYGRITGWGQDGPLA 130
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL ++G L +G P P NL DFGGG L +GI+ AL ER +SG G
Sbjct: 131 QTAGHDINYLAITGALHAMGREGEGPAIPLNLVGDFGGGSLYLVVGILSALLERERSGVG 190
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G +L + +W RG N+LD G +YDTY T D R +AVGA+E
Sbjct: 191 QVVDAAIVDGVTHLTTLFHGLMAAGVWQDRRGVNMLDSGVPWYDTYRTADARHVAVGAVE 250
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
FYA+L+ LG+ + P+ ++ G R +LT F W + F TDACV P
Sbjct: 251 PAFYAELMTTLGLDPD--PRRRIDPGQWPRIRDELTAAFAASPLQTWIDTFAGTDACVAP 308
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP-GVHTREVL 352
VLS S+A P RG F+ + G+ P PAPRLSRTPG+ + P P HTR VL
Sbjct: 309 VLSFSEAIETPQLRERGVFV-DVGGLAMPGPAPRLSRTPGS---VQSAPVPFAAHTRAVL 364
Query: 353 RHFGYSDANIEELIR 367
+G NI++L +
Sbjct: 365 AEYGVP--NIDDLFQ 377
>gi|406860280|gb|EKD13339.1| CoA-transferase family III [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 403
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/313 (45%), Positives = 209/313 (66%), Gaps = 19/313 (6%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQ----PFVQDTVGYGK 51
+L GI VLEFAGLAP G++L + GA+V+R+D+ H P D + K
Sbjct: 6 SLTGIRVLEFAGLAP----GLLLADNGASVLRLDRAIPNLTHSNSSELPPPTADLLTRRK 61
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
S+ ++LK A+G+ +K+L +DV+++PFR G++EKL LGP+VL + NPR+I R++G+
Sbjct: 62 SSIAVDLKSARGVDFVKSLIPHTDVVIDPFRPGILEKLGLGPEVLLRINPRIIVGRITGF 121
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
+DG Y MAGHDINY+ +SG L++LG + P PP N+ DF GGG GI++AL
Sbjct: 122 RRDGKYKYMAGHDINYIAVSGALAMLGRKGEKPLPPANILGDFAGGGATLFQGILLALLA 181
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
R K+G+GQV++ NMV+G++YL S+ +WD+PRGEN+LD G+ +YDTYETKDG++
Sbjct: 182 REKNGKGQVVEANMVDGASYLMSFPRMLLKAPMWDRPRGENMLDSGSPWYDTYETKDGKY 241
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDN 286
M+VGALE QF+A+LL GLG++ + + + + +A FKEKT+ EW ++FD
Sbjct: 242 MSVGALEPQFFAELLRGLGLSGKGIEKSRSDRSTWPELKATFERIFKEKTRTEWEKVFDK 301
Query: 287 TDACVTPVLSLSQ 299
TDAC TPVL +
Sbjct: 302 TDACCTPVLEYRE 314
>gi|114761482|ref|ZP_01441397.1| putative racemase [Pelagibaca bermudensis HTCC2601]
gi|114545730|gb|EAU48732.1| putative racemase [Roseovarius sp. HTCC2601]
Length = 413
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 224/375 (59%), Gaps = 19/375 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------HGAQPFVQDTVGYGKKSLC 55
L+G+ VLE AG+ P PFCGM+L + GA V+R+D+ GA+ QD G K+S
Sbjct: 35 LEGVRVLELAGMGPVPFCGMLLGDMGADVLRVDRITPVERGVGAED-AQDLRGRNKRSAG 93
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
I+LK + G + + L Q+D+++E +R GVME+L LGPD NP+L+Y R +G+GQDG
Sbjct: 94 IDLKSSAGRATLLELVAQADILIEGYRPGVMERLGLGPDTCLARNPKLVYGRATGWGQDG 153
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ L+G L+++G P PP NL D+GGG L A G V AL
Sbjct: 154 PLAQAAGHDINYIALTGALAMIGPAGGAPVPPLNLVGDYGGGALYLAFGTVCALHHARSG 213
Query: 176 GRGQVIDCNMVEG-SAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
G GQV+D M++G S+ L + Q+ L + RG+N LDGGA +Y TYET+DG +MAV
Sbjct: 214 GGGQVVDAAMIDGVSSLLTVFRGFLQNDRLHEG-RGQNALDGGAPWYCTYETRDGGWMAV 272
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
GALE +FY + GLG+ LP E R+ +F+++++AEW +F +DAC
Sbjct: 273 GALEQRFYIPFVTGLGLDPAALPSREDRANWGELRSLFAARFRKRSRAEWELVFAGSDAC 332
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTR 349
V+PVLSL++A+ HP + R +F G P PAPR S+TP T + PA G T+
Sbjct: 333 VSPVLSLAEASRHPQSTARAAFT-WLDGAEHPRPAPRFSQTPATVR---QAPARAGADTQ 388
Query: 350 EVLRHFGYSDANIEE 364
L +G I +
Sbjct: 389 VALSDWGIDATQIRD 403
>gi|398781019|ref|ZP_10545206.1| fatty acid-CoA racemase [Streptomyces auratus AGR0001]
gi|396997760|gb|EJJ08707.1| fatty acid-CoA racemase [Streptomyces auratus AGR0001]
Length = 386
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 217/359 (60%), Gaps = 13/359 (3%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINLKKA 61
+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++LK
Sbjct: 1 MRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLGIDPAYDLTNRNKRSVLVDLKTP 60
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G++ ++ L ++DV++E +R GV E+L +GP+ NPRL+Y R++G+GQ GP + A
Sbjct: 61 EGVAQVRELVARADVLVEGYRPGVAERLGVGPEECLAINPRLVYGRMTGWGQRGPLADTA 120
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL-FERSKSGRGQV 180
GHDI Y+ ++G L ++G + P P NL D+ GG L +GI+ AL RS+ GRGQV
Sbjct: 121 GHDIGYIAITGALGMIGSPDGPPAIPANLVGDYAGGSLYLVIGILAALQHARSEDGRGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +V+G+A+L + + W RG NLLDGGA FY TYET DG MAVGALE +
Sbjct: 181 VDAAIVDGTAHLTAMIHGMLAAGGWQDRRGSNLLDGGAPFYGTYETADGGHMAVGALEKR 240
Query: 241 FYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
FY + + LG+ +E + ++ RA + +F+ +T+ EW +F +DACV PVLSL
Sbjct: 241 FYGEFIRLLGLAQEVPDRDDLAAWTELRAAIAARFRTRTREEWTAVFQGSDACVAPVLSL 300
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRHF 355
+A HPH RG+F+ G+ PAPAPR SRTPG + PA PG T E+ R +
Sbjct: 301 REAPQHPHLAARGTFV-EHGGITQPAPAPRFSRTPGALR---RPPARPGADTAEIARDW 355
>gi|367474753|ref|ZP_09474247.1| putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp. ORS
285]
gi|365272939|emb|CCD86715.1| putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp. ORS
285]
Length = 370
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 206/341 (60%), Gaps = 6/341 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LAGFRIVEFAGIGPGPFACMLLADMGAEVVTLDRVGARKNMKSVAGRGRKVIELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + L +D ++E FR GVME+L LGPDV+ NP+L+Y R++G+GQ+GP + AG
Sbjct: 77 VIAEVLELLTGADALIEGFRPGVMERLGLGPDVVLARNPKLVYGRMTGWGQEGPLAHAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + R P PP NL DFGGG L +G++ AL E SKSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGPKER-PVPPLNLVGDFGGGALYLVVGVLAALLEASKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 TAMCDGAASLLAMFFDLTAMGRWTEGRERNFLDGGAHFYGVYECACGNFISIGSIEPQFY 255
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L +++ L EK FK KT+ EWC I + TD C PVL++S
Sbjct: 256 ALLRQHADLSDPAFDAQMDPRAWPALKEKLVGVFKSKTREEWCAIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+A H H RG F+ R GV PAPAPR SRTP T + E
Sbjct: 316 EAPQHAHMAARGVFV-ERHGVTQPAPAPRFSRTPSTIREPE 355
>gi|407698031|ref|YP_006822819.1| CoA-transferase family III family protein 12 [Alcanivorax
dieselolei B5]
gi|407255369|gb|AFT72476.1| CoA-transferase family III family protein 12 [Alcanivorax
dieselolei B5]
Length = 385
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 206/337 (61%), Gaps = 15/337 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQ--DTVGYGKKSLCINLK 59
LKG+ ++E G+ P PFC M+ + GA VIRID+ G +P D + G++SL ++LK
Sbjct: 14 LKGLKIIEMVGIGPGPFCSMMFADMGAEVIRIDRPGRGEPGSARFDVLARGRRSLALDLK 73
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K ++ +L Q+DV++E FR GVMEK+ LGP+V + P L++ R++G+GQ GP SS
Sbjct: 74 KPGAADLVLDLVEQADVLIEGFRPGVMEKMGLGPEVCLRRRPSLVFGRMTGWGQFGPLSS 133
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ L+G L +G R P PP N DFGGG +M A GI+ A++E SG+GQ
Sbjct: 134 AAGHDLNYIALTGALHGIG-RADGPPPPLNYVGDFGGGAMMLAFGILAAVYESRASGQGQ 192
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M +G+A L + + + W R NLLDG A +YDTY+ DG+F+AVGA+E
Sbjct: 193 VVDAAMTDGAALLSAMMYGMKAAGAWRNERSANLLDGAAPYYDTYQCADGKFVAVGAIEP 252
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGR-------AKLTEKFKEKTQAEWCEIFDNTDACVT 292
QFYA+LL E + P+ E + R KLT F + + WCE + +DAC
Sbjct: 253 QFYAELLK---RAEIDDPEFEAQNDRQRWPSLKTKLTRLFASQPRDYWCERLEGSDACFA 309
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS 329
PVL +A HPHN R +FI GVV PAPAPR S
Sbjct: 310 PVLDWEEAPQHPHNRARHTFI-TVDGVVQPAPAPRFS 345
>gi|433802345|gb|AGB51429.1| alpha-methylacyl-CoA racemase [Nocardia nova]
Length = 366
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 209/336 (62%), Gaps = 6/336 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP-FVQDTVGYGKKSLCINLKKA 61
L GI V+E AG+ P P ++L + GA V+R+ + G P F++ G+ + NLK
Sbjct: 13 LAGIKVVELAGIGPGPHAALLLADLGADVVRVQRPGLLPGFMERPQWRGRTIVEANLKDP 72
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ + L ++DV+LE FR GV E++ LGPD + NPRL+Y R++G+GQ GP + A
Sbjct: 73 ADIEKVLGLVEKADVLLEGFRPGVTERMGLGPDTALERNPRLVYGRMTGWGQFGPLADRA 132
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G+L+ +G + P PP N+ DFGGG + +G++ AL ERS SG+GQVI
Sbjct: 133 GHDINYISLTGVLNAIGRKGERPVPPLNMVGDFGGGSMFLVMGVLSALVERSVSGKGQVI 192
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M++G+ L + + LW RG NLLD G FYDTYET DG++MAVG +E QF
Sbjct: 193 DSAMIDGALSLSHMIWGMRGMGLWSDERGTNLLDTGMAFYDTYETSDGKYMAVGCIEPQF 252
Query: 242 YAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA+ L GL + E LP G+ +L TEKFK KT+ EW IFD TDAC TPVL+
Sbjct: 253 YAEFLKGLEIDPEGLPAQIDPNGQDQLRKLFTEKFKTKTRDEWTAIFDGTDACTTPVLTF 312
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
++A ++ H R S + GVV APAPR SRT G
Sbjct: 313 TEAIANGHITARESLV-EIDGVVQHAPAPRFSRTQG 347
>gi|311109824|ref|YP_003982675.1| CoA-transferase family III family protein 51 [Achromobacter
xylosoxidans A8]
gi|310764513|gb|ADP19960.1| CoA-transferase family III family protein 51 [Achromobacter
xylosoxidans A8]
Length = 388
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 219/374 (58%), Gaps = 22/374 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L+GI ++E AG+ P P M+L + GATV+R+D+ +P + + ++ + +
Sbjct: 5 LQGIRIIELAGIGPCPMAAMLLADLGATVLRVDRPEPAALGIERPLKFNLLLRNRQVIAL 64
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK ++ L ++D +LE FR GVME+L LGP+ + NP+L+Y R++G+GQ GP
Sbjct: 65 DLKNPAARDLLLRLVEEADALLEGFRPGVMERLGLGPEPCLERNPKLVYGRMTGWGQTGP 124
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHD+NYLGL+G+L +G + PTPP NL DFGGG L ALG++ + E +SG
Sbjct: 125 LAQVAGHDLNYLGLTGLLDAIGRAGQPPTPPLNLVGDFGGGALYLALGVLAGIIEARQSG 184
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+G+A LG+ L LW RG N LD GA+FYD YE DG++++V
Sbjct: 185 MGQVVDAAIVDGAASLGTALFGLHAAGLWRNERGANTLDSGAYFYDVYECADGKWVSVAP 244
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LES+F+ +LL + + L + G RA L E+FK +TQA+WC++ TD CV
Sbjct: 245 LESRFHDRLLEIMEIDRASLGRQADPEGWPRARAILAERFKTRTQAQWCDLLGTTDVCVA 304
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL + QA HPH R + GV PAPAPR SRT APG+ T V
Sbjct: 305 PVLPMDQAGMHPHMREREVLV-EIDGVTQPAPAPRFSRT-----------APGLPTSPVA 352
Query: 353 RHFGYSDANIEELI 366
DA +E+ +
Sbjct: 353 ASPASMDAALEKWL 366
>gi|145222714|ref|YP_001133392.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium gilvum PYR-GCK]
gi|315443179|ref|YP_004076058.1| acyl-CoA transferase/carnitine dehydratase [Mycobacterium gilvum
Spyr1]
gi|145215200|gb|ABP44604.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium gilvum PYR-GCK]
gi|315261482|gb|ADT98223.1| predicted acyl-CoA transferase/carnitine dehydratase [Mycobacterium
gilvum Spyr1]
Length = 364
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 215/363 (59%), Gaps = 14/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-----DTVGYGKKSLCIN 57
L+G+ V+E AG+ P P MI + GA V+RI++ G P D + ++S+ N
Sbjct: 5 LQGLRVVELAGIGPGPHAAMIFGDLGADVVRIERPGKGPGPATKPGGDYLLRNRRSVAAN 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + ++ L ++DV++E FR GV E+L LGP+ K N +L+YAR++G+GQDGP
Sbjct: 65 LKSDEDREMVLRLIAKADVLIEGFRPGVTERLGLGPEDCAKVNEKLVYARMTGWGQDGPR 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ L+G+L +G P PP NLA DFGGG + +G++ AL+ER +SG+
Sbjct: 125 AQQAGHDINYISLNGVLHAIGRHGERPVPPLNLAGDFGGGSMFLLVGVLAALWERERSGK 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+GS+ L + + +W RG N+LD GA +YDTYE DGR +AVG +
Sbjct: 185 GQVVDAAMVDGSSVLSMMMWSFRGMGMWSDERGVNMLDTGAPYYDTYECSDGRHIAVGCI 244
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQA----EWCEIFDNTDACVTP 293
E QFYA+ L G+G+ +LP +L E F + A W +F TDACVTP
Sbjct: 245 EPQFYAEFLKGVGLEGADLPGQNDMGRWPELREAFSKAIAAHDRDHWAGVFAGTDACVTP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVL 352
VLS ++ S PHN R +F + G + PAPAPR SR+ P K PG T VL
Sbjct: 305 VLSFAEVESEPHNTERDTFY-SENGSLYPAPAPRFSRSVPSAPKAPG---VPGADTEAVL 360
Query: 353 RHF 355
+ +
Sbjct: 361 QEW 363
>gi|148252170|ref|YP_001236755.1| alpha-methylacyl-CoA racemase [Bradyrhizobium sp. BTAi1]
gi|146404343|gb|ABQ32849.1| Putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase)
(2-arylpropionyl-CoA epimerase) [Bradyrhizobium sp.
BTAi1]
Length = 370
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 206/334 (61%), Gaps = 6/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++EFAG+ P PF M+L + GA V+ +D+ GA+ ++ G G+K + ++LK
Sbjct: 17 LAGFRIVEFAGIGPGPFACMLLADMGAEVVTLDRVGARKTMKSVAGRGRKVIELDLKDKA 76
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + +L +D ++E FR GVME+L LGP+++ NP+L+Y R++G+GQ GP + AG
Sbjct: 77 VIADVLDLLAGADALIEGFRPGVMERLGLGPEIVLARNPKLVYGRMTGWGQAGPLAQAAG 136
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + R P PP NL DFGGG L +G++ AL E SKSG+GQV+D
Sbjct: 137 HDINYISITGALAAIGPKER-PVPPLNLVGDFGGGALYLVVGVLAALLEASKSGKGQVVD 195
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N LDGGAHFY YE G F+++G++E QFY
Sbjct: 196 TAMCDGAASLLAMFFDLTAMGRWTEGRERNFLDGGAHFYGVYECACGNFISIGSIEPQFY 255
Query: 243 AQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L G++ E ++ + KL FK KT+ EWC I + TD C PVL++S
Sbjct: 256 ALLRQHAGLSDPAFEAQMDPRAWPALKEKLVAVFKSKTREEWCAIMEGTDICFAPVLTMS 315
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A H H RG F+ R GV PAPAPR SRTP
Sbjct: 316 EAPKHAHMAARGVFV-ERHGVTQPAPAPRFSRTP 348
>gi|385204022|ref|ZP_10030892.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. Ch1-1]
gi|385183913|gb|EIF33187.1| putative acyl-CoA transferase/carnitine dehydratase [Burkholderia
sp. Ch1-1]
Length = 364
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 150/347 (43%), Positives = 209/347 (60%), Gaps = 9/347 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EF+ L P PFC M+L + GA ++RI + G + D + G++ + ++LK
Sbjct: 6 LSGVRVIEFSALGPVPFCAMLLADMGADIVRIARPGTRTDADDFMQRGRRIVPLDLKSPA 65
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
L +D++LE R GVMEKL LGPDV NPRL++ R++G+GQ GP ++ AG
Sbjct: 66 DRHTALELVGHADIVLEGSRPGVMEKLGLGPDVCLARNPRLVFGRMTGWGQTGPLAATAG 125
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L +G N P PP NL D+GGG + A G + AL+E SG GQVID
Sbjct: 126 HDINYIALAGALDAIGPPNGAPVPPLNLLGDYGGGAMFLAFGALCALWEARNSGEGQVID 185
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G+A L S + W+ RG NLLDGGA +Y TY T+D R++AVGA+E F+
Sbjct: 186 AAMVDGTATLMSLFCKLSGLGQWNDSRGTNLLDGGAPWYGTYRTQDNRYVAVGAIEEPFW 245
Query: 243 AQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
LL L + + LP +TG RA L E+F + W F N+DACV+PVLSL
Sbjct: 246 QLLLTQLEIPSDSLPPRSDKTGWPVIRAALAERFSSLPRDAWAAHFRNSDACVSPVLSLH 305
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP----GTSKITEHN 341
+A H H R S+ + + ++ PAPAPRLSRTP G S+++ +
Sbjct: 306 EAARHEHMAARRSYGVD-SDMLRPAPAPRLSRTPAIPAGISEVSSAD 351
>gi|418046877|ref|ZP_12684965.1| Alpha-methylacyl-CoA racemase [Mycobacterium rhodesiae JS60]
gi|353192547|gb|EHB58051.1| Alpha-methylacyl-CoA racemase [Mycobacterium rhodesiae JS60]
Length = 359
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 210/336 (62%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L G+ V+E G+ P P GMIL + GA V+R+ + G + V GK+ + +++K
Sbjct: 7 LAGVRVIELGGIGPGPHAGMILADLGADVVRVRRPGGLTMPAENVDLLHRGKRVVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G + LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +S
Sbjct: 67 SEPG--ALLELAARADVLLDCFRPGTCERLGIGPDDCAAVNPRLIFARITGWGQDGPLAS 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G LS +G+ +R P P NL ADFGGG ++ LG+V AL+ER KSG GQ
Sbjct: 125 TAGHDINYLSATGALSAIGYADRPPVAPLNLVADFGGGSMLVLLGVVAALYEREKSGAGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + T R LLDGGA +Y TYET DG +MAVGA+E
Sbjct: 185 VIDAAMVDGVSVLSQMMWTMKATGSLKDRRESFLLDGGAPYYRTYETADGGYMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPVL 295
QF+AQLLAGLG++ + +PQ ++ E+F KT+ EW IF TDACVTPVL
Sbjct: 245 QFFAQLLAGLGLSTDAVPQQSDVARYPQMREQFASIFAGKTREEWTAIFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
S ++A S+ H + R + I + G APAPR SR+
Sbjct: 305 SWAEAASNEHLLARRTLI-DIDGTRQAAPAPRFSRS 339
>gi|169627944|ref|YP_001701593.1| fatty-acid-CoA racemase Far [Mycobacterium abscessus ATCC 19977]
gi|419710739|ref|ZP_14238204.1| fatty-acid-CoA racemase Far [Mycobacterium abscessus M93]
gi|419713439|ref|ZP_14240865.1| fatty-acid-CoA racemase Far [Mycobacterium abscessus M94]
gi|420862846|ref|ZP_15326240.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0303]
gi|420867242|ref|ZP_15330628.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0726-RA]
gi|420871676|ref|ZP_15335056.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0726-RB]
gi|420925593|ref|ZP_15388881.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-1108]
gi|420965137|ref|ZP_15428353.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0810-R]
gi|420975943|ref|ZP_15439128.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0212]
gi|420981319|ref|ZP_15444492.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0728-R]
gi|421006014|ref|ZP_15469130.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0119-R]
gi|421011365|ref|ZP_15474463.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0122-R]
gi|421027520|ref|ZP_15490559.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0930-R]
gi|421032551|ref|ZP_15495575.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0930-S]
gi|421046877|ref|ZP_15509877.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0116-S]
gi|169239911|emb|CAM60939.1| Probable fatty-acid-CoA racemase Far [Mycobacterium abscessus]
gi|382940738|gb|EIC65061.1| fatty-acid-CoA racemase Far [Mycobacterium abscessus M93]
gi|382946543|gb|EIC70827.1| fatty-acid-CoA racemase Far [Mycobacterium abscessus M94]
gi|392074365|gb|EIU00202.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0726-RA]
gi|392074520|gb|EIU00356.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0303]
gi|392075865|gb|EIU01698.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0726-RB]
gi|392140668|gb|EIU66395.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-1108]
gi|392173023|gb|EIU98692.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0212]
gi|392177117|gb|EIV02775.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0728-R]
gi|392203484|gb|EIV29078.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0119-R]
gi|392212675|gb|EIV38235.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0122-R]
gi|392232138|gb|EIV57641.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0930-S]
gi|392233480|gb|EIV58979.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0930-R]
gi|392236330|gb|EIV61828.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0116-S]
gi|392258116|gb|EIV83563.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0810-R]
Length = 363
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 213/337 (63%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKA 61
L G+ V+E G+ P P M+L++ GA VIR+ + G ++T + + +NL
Sbjct: 11 LAGVKVIELGGIGPGPHAAMMLSDLGADVIRVRRPGGLAIPAEETDLFHRGKRLVNLDVK 70
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
K + L +++DV+L+PFR GV E++ +GP+ K NPRLI+AR++G+GQ GP + A
Sbjct: 71 KDPEALLALVDKADVLLDPFRPGVCERIGIGPEECAKRNPRLIFARMTGWGQHGPMADRA 130
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL L+G L +G+++R P PP NL ADFGGG ++ GI+ AL+ER KSG+GQVI
Sbjct: 131 GHDINYLSLTGALGSMGYKDRPPMPPMNLVADFGGGSMLLVQGILAALYEREKSGKGQVI 190
Query: 182 DCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
D MV+G + L W T + L+D+ R LLDGG+ FY TYET DG++MAVG++E
Sbjct: 191 DGAMVDGVSQLAQMQW-TMYNNGLLFDE-REAGLLDGGSPFYGTYETSDGKYMAVGSIEP 248
Query: 240 QFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A L+ GLG+ E +P + R + FK KT+ EW EIF TDACV+PVL
Sbjct: 249 QFFAILVQGLGLDPESVPFQLDKARYPEMRKMFDDAFKTKTRDEWTEIFIGTDACVSPVL 308
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ +A + H RG+ + + GV APAPR SRTP
Sbjct: 309 TWGEAKQNEHLRDRGTIV-DVDGVTQAAPAPRFSRTP 344
>gi|171693913|ref|XP_001911881.1| hypothetical protein [Podospora anserina S mat+]
gi|170946905|emb|CAP73709.1| unnamed protein product [Podospora anserina S mat+]
Length = 424
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 149/328 (45%), Positives = 210/328 (64%), Gaps = 31/328 (9%)
Query: 3 LKGITVLEFAGLAPA-----------------------PFCGMILNEFGATVIRIDKHGA 39
L+GI VLEFAGLAP PF G++L++ GA+++RID+ +
Sbjct: 7 LQGIKVLEFAGLAPGMFSHTRPPPPQFSTTDELTPISGPFAGLLLSDSGASILRIDRPSS 66
Query: 40 QPFVQ---DTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVL 96
P D + KKS+ ++LK G+ ++K+LA ++D++++PFR GV+EKL LGP VL
Sbjct: 67 SPSPLPTPDLLTRRKKSIAVDLKFPLGIELVKSLAAKADILIDPFRPGVLEKLGLGPSVL 126
Query: 97 CKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGG 156
C NPRLIYAR++G+ +DG ++ MAGHDINYL +SG LSLLG +N PTPP N+ DF G
Sbjct: 127 CSLNPRLIYARMTGFRRDGKWAKMAGHDINYLAVSGSLSLLGRKNSPPTPPVNILGDFAG 186
Query: 157 GGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDG 216
GG GI++AL R+ +G+GQV++ NMV+G++YL ++ T PRGENLLD
Sbjct: 187 GGATLFQGILLALLSRATTGKGQVVEANMVDGASYLATFPRFALHTMTGSLPRGENLLDS 246
Query: 217 GAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEK 271
G +YD YET+DGR+MAVGALE QF+ L+ GLG+ + + + G R L +
Sbjct: 247 GCPYYDCYETRDGRWMAVGALEPQFFGDLIRGLGLEGQGWEERRYDRGNWGEFRGLLERR 306
Query: 272 FKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
FKE+T+ EW +F+ TDAC TPVL +
Sbjct: 307 FKERTREEWERVFEGTDACCTPVLEYGE 334
>gi|256379666|ref|YP_003103326.1| L-carnitine dehydratase/bile acid-inducible protein F
[Actinosynnema mirum DSM 43827]
gi|255923969|gb|ACU39480.1| L-carnitine dehydratase/bile acid-inducible protein F
[Actinosynnema mirum DSM 43827]
Length = 373
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/372 (44%), Positives = 236/372 (63%), Gaps = 7/372 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E AGLAPAPF M+L + GA V+R+D+ GA D +G G++S+ ++L+ +
Sbjct: 5 LAGLRVVELAGLAPAPFGCMVLADLGADVVRVDRIGAGGAPGDLLGRGRRSVAVDLRSPE 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G +++ +L ++DV++E +R GV E+L LGP NPRL+Y R++G+GQ GP + AG
Sbjct: 65 GAALVLDLVERADVLVEGYRPGVTERLGLGPARCLARNPRLVYGRMTGWGQTGPLAERAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDI+Y+ ++G LS +G + PT P NL DFGGGGL+ A+G++ AL ER +SGRGQV+D
Sbjct: 125 HDIDYIAVAGALSPIGRAGQPPTVPLNLVGDFGGGGLLLAVGVLAALHERDRSGRGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G+A L ++L + W RG NLLDGGA FYD YET DGR++ VGALE +FY
Sbjct: 185 AAMVDGAALLTTFLHGMRRGGAWRGERGRNLLDGGAPFYDVYETADGRYVGVGALEEKFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
A+L+ LG+ + P+ + T RA++ E + +T+ EW + DAC+ PVL +
Sbjct: 245 AELVDLLGLVDPP-PREDPATWPELRARIAEAVRGRTRDEWAALAQGRDACLAPVLDPDE 303
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSD 359
A +HPHN R +F+ GV PAPAPR RTP + + PA G HT EVL G +
Sbjct: 304 APAHPHNAARATFV-EVDGVPQPAPAPRFDRTP--TAVPGSVPAVGEHTDEVLAELGLAP 360
Query: 360 ANIEELIREDVI 371
+ L VI
Sbjct: 361 DRVTALRTAGVI 372
>gi|319781802|ref|YP_004141278.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167690|gb|ADV11228.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 391
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/384 (39%), Positives = 225/384 (58%), Gaps = 20/384 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-----PFVQDTVGYGKKSLCIN 57
L G+ V+E AGL P G++L+E GA ++RI++ G P + +G+ L ++
Sbjct: 14 LTGLKVIEMAGLGAVPLAGLMLSEMGAQLLRIERAGTSQLLPLPDEYNIDRHGRAVLRLD 73
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK+ +G ++ LA ++D++LE FR GVME+L LGP+ + NP LIY R++G+GQ GP
Sbjct: 74 LKRREGTDLLLRLAEKADMLLEGFRPGVMERLGLGPETVLVRNPALIYGRMTGFGQGGPL 133
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI YL SG+L +G P PP NL AD+GGG +M G++ ALF+RS++G+
Sbjct: 134 AGRAGHDITYLAYSGVLHAIGHAGGRPVPPLNLVADYGGGAMMLVAGVLAALFQRSRTGK 193
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
G+VID MV+G++ L L LW RG NLLD GA FYDTYET DGR +A+G L
Sbjct: 194 GEVIDAAMVDGASMLAVPLHALMAAGLWSDKRGANLLDSGAPFYDTYETSDGRHIAIGCL 253
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QF+A+ A L +E + + RA + ++ ++K + +W +F TDACV
Sbjct: 254 EPQFFAE-FARLLPLDERFASGQYDKALWPPMRAAIADRIRQKPRDDWDRLFAQTDACVA 312
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG---VHTR 349
PVLSL +A HPHN R + + PAPAPR S + T PG +
Sbjct: 313 PVLSLQEAKHHPHNRARNASV-TAGAFERPAPAPRFSSSQPTLATM-----PGDEDLLPS 366
Query: 350 EVLRHFGYSDANIEELIREDVIEE 373
L FG++ A I++L++ ++ +
Sbjct: 367 TTLARFGFAKAEIDDLVKSGLLTD 390
>gi|182434789|ref|YP_001822508.1| fatty acid-CoA racemase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178463305|dbj|BAG17825.1| putative fatty acid-CoA racemase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 392
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 205/337 (60%), Gaps = 8/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 25 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGIGIAPASDLTNRNKRSVLLDL 84
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + +L ++D+++E +R GV E+L +GPD NPRL+Y R++G+GQDGP +
Sbjct: 85 KGDEGPARVLDLVERADILIEGYRPGVAERLGVGPDACLARNPRLVYGRMTGWGQDGPLA 144
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI YL LSG LS++G + P P NL D+ GG L +G++ AL G G
Sbjct: 145 ERAGHDIAYLALSGTLSMIGKPDEPPVVPANLVGDYAGGSLYLVVGVLAALQHARGHGEG 204
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TY T DG MAVG LE
Sbjct: 205 QVVDAAIVDGAAHLATMIHGMLAAGSWQDRRGANLLDGGCPFYGTYATSDGGHMAVGPLE 264
Query: 239 SQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+ A LG+ + + +V + RA + E+F +T+AEW E+FD TDACV PVL
Sbjct: 265 EKFYAEFAALLGIADAFPDRWDVARWDELRAAVAERFSTRTRAEWTEVFDGTDACVAPVL 324
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
SL++A HPH R +F+ G+ PAPAPR S TP
Sbjct: 325 SLTEAPHHPHLAARSTFV-EHGGLTQPAPAPRFSATP 360
>gi|402548993|ref|ZP_10845846.1| L-carnitine dehydratase/bile acid-inducible protein F [SAR86
cluster bacterium SAR86C]
Length = 367
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 202/335 (60%), Gaps = 7/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ--DTVGYGKKSLCINLKK 60
L GI VLEF+G+ P P+CGMIL + GA VIR+ + D K S+ +LK
Sbjct: 4 LHGIKVLEFSGIGPGPYCGMILADLGAEVIRLSRKDQAGIDNKFDIHNRSKLSITADLKN 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ L DV+ E FR GVMEKL LGP+ N LIY R++G+GQDGP S
Sbjct: 64 PDTTHEILKLIESVDVVFEGFRPGVMEKLGLGPEECLSVNKSLIYGRMTGWGQDGPMSKQ 123
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ LSG L +G + NP P NL D+GGGG A+GI+ AL K+G+GQV
Sbjct: 124 AGHDINYISLSGALHSMGRSSENPQAPLNLVGDYGGGGAQLAIGILSALIGSMKTGKGQV 183
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D M++GS L S+ ++ W+ R NLLDG AHFYDTY+ DG+F+A+G++E Q
Sbjct: 184 VDAAMIDGSLSLMSFFYSLKEMGHWEDKRESNLLDGAAHFYDTYKCSDGKFLAIGSIEPQ 243
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL L + ++ H ++ +L + +KT+ EW EIF TDACVTPVL
Sbjct: 244 FYAILLEKLMIDDDRFNNHMDKSKWPELKQVIAKNILQKTRDEWVEIFKGTDACVTPVLD 303
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+++A + HN+ RG+FI + G V PAP+PR S
Sbjct: 304 MTEAKLNDHNLARGAFI-DIDGFVQPAPSPRFSEN 337
>gi|427816752|ref|ZP_18983816.1| putative racemase [Bordetella bronchiseptica 1289]
gi|410567752|emb|CCN25323.1| putative racemase [Bordetella bronchiseptica 1289]
Length = 381
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 217/369 (58%), Gaps = 13/369 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-------QPFVQDTVGYGKKSLC 55
L G+ V+EF + PAP C M+L + GATVIR+++ +P + + + +
Sbjct: 4 LAGLKVVEFPAIGPAPMCAMLLADMGATVIRLERQQPSADLGVERPLKYNLLLRNRPGIS 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK +G + L +DV+LE FR G ME++ GPD + NPRL+Y R++G+GQ G
Sbjct: 64 VDLKAPEGAQFAQALLESADVLLEGFRPGTMERMGFGPDACLRKNPRLVYGRMTGWGQTG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
PY++MAGHD+NY+ ++G L +G + + PTPP NL DFGGG L A+G++ A+F +
Sbjct: 124 PYAAMAGHDLNYIAMTGALDAIGRKGQPPTPPLNLVGDFGGGALYLAMGVLAAVFAARGT 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQV+D MV+G+A L + L++ RG N+LD GA +YD Y DG+++++
Sbjct: 184 GKGQVVDAAMVDGAASLMTPFFGMAAAGLFNAERGTNVLDSGAPYYDVYRCADGKYLSIA 243
Query: 236 ALESQFYAQLLAGLGMTEEELPQH-EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+E++F L + Q + + R + + +TQA+WCE FD TDACV PV
Sbjct: 244 PIEARFRRIFFEKLDLDAPAGDQRADWDALREAIAARIATRTQAQWCECFDGTDACVAPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG-VHTREVLR 353
LS+++A SHPHN R +F+ + GVV PAPAPR TP T P P E L
Sbjct: 304 LSIAEAPSHPHNQARATFL-DIDGVVQPAPAPRFGATP---LATPRPPEPANSRFEECLG 359
Query: 354 HFGYSDANI 362
+G S A+I
Sbjct: 360 EWGMSAADI 368
>gi|443492747|ref|YP_007370894.1| fatty-acid-CoA racemase Far [Mycobacterium liflandii 128FXT]
gi|442585244|gb|AGC64387.1| fatty-acid-CoA racemase Far [Mycobacterium liflandii 128FXT]
Length = 359
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 208/336 (61%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVKVIELGGIGPGPHAGMVLADLGADVVRVRRPGGLQMPAEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +
Sbjct: 67 SQP--QALLELAAKADVLLDCFRPGTCERLGIGPDDCAAVNPRLIFARITGWGQDGPLAP 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G LS LG+R+R PTPP NL ADFGGG ++ LGI+ AL+ER +SG+GQ
Sbjct: 125 TAGHDINYLSQTGALSALGYRDRPPTPPLNLVADFGGGSMLVLLGIMAALYERERSGKGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + R LLDGGA FY YET DG+ MAVGA+E
Sbjct: 185 VIDAAMVDGVSVLAQMMWTMKGIGSLRDERESFLLDGGAPFYRCYETSDGKHMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LLAGLG++ E+P R +E+F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLAGLGLSAAEVPSQLDIAAYPKMREMFSERFASRTRDEWAAVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ S+A + H R + I + GV APAPR SRT
Sbjct: 305 TWSEAAASDHLRARSTVI-SAHGVEQAAPAPRFSRT 339
>gi|419965299|ref|ZP_14481246.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus M213]
gi|414569276|gb|EKT80022.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus M213]
Length = 379
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/377 (44%), Positives = 236/377 (62%), Gaps = 10/377 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L G+TV+E A LAPAPF MIL + GA VIR+++ G + G G++S+ +NL+
Sbjct: 6 LSGLTVVEIASLAPAPFGCMILADLGADVIRVERAGDGGRLMAPSGVLDRGRRSIAVNLR 65
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+GL ++ L ++D+++E FR GV E+L +GPD NP LIY R++G+GQDGP +
Sbjct: 66 TPEGLEAVRTLVERADILVEGFRPGVAERLGIGPDDCLSRNPGLIYGRMTGWGQDGPLAR 125
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G L +G P PP NL DFGGGGLM +GI+ AL ERS+SGRGQ
Sbjct: 126 RAGHDINYIALAGALEPIGRAGERPVPPLNLLGDFGGGGLMLTMGILAALHERSRSGRGQ 185
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +MV+G+A L +++ LW + RG N+LDG A FYDTYE DG +AVG +E
Sbjct: 186 VVDASMVDGAALLTAFVHGMNAAGLWQEGRGRNVLDGAAAFYDTYECADGLHVAVGCVEP 245
Query: 240 QFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FY +LL LG++ E+LP Q++++ + +L E F + + EW +F ++DACV+PVL
Sbjct: 246 HFYGELLEVLGLSGEDLPLQYDLDAAPELKKRLAEVFATRPRDEWAALFADSDACVSPVL 305
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
S +A HPHN R +F+ G+ PAPAPR RT + + P PG T +L
Sbjct: 306 SPWEAHEHPHNKERETFV-EVGGIRQPAPAPRFGRT--PAPVPRPAPRPGQDTDAILAQA 362
Query: 356 GYSDANIEELIREDVIE 372
GY A IE+L +E
Sbjct: 363 GYDAAGIEQLRSAGAVE 379
>gi|332560799|ref|ZP_08415117.1| fatty-acyl-CoA racemase [Rhodobacter sphaeroides WS8N]
gi|332274597|gb|EGJ19913.1| fatty-acyl-CoA racemase [Rhodobacter sphaeroides WS8N]
Length = 393
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 211/363 (58%), Gaps = 12/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQ---DTVGYGKKSLCI 56
L G+ ++E GL P PF M+L++ GA VIR+ A+ P + D + G++S+ I
Sbjct: 19 LAGLRIVEMVGLGPCPFAAMMLSDAGAEVIRVHPLAARAEIPLMDTEFDVLARGRRSIAI 78
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ G++++ +LA ++D ++E FR GVME+L LGP NPRL+Y R++G+GQDGP
Sbjct: 79 DLKRPAGVALLLDLAERADGLMEGFRPGVMERLGLGPAECHARNPRLVYGRMTGWGQDGP 138
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHD+ Y+ LSG+L LG +R P P NL DFGGGG+M A G+V AL + +G
Sbjct: 139 LAATAGHDLTYIALSGVLGALGPADRPPAVPLNLIGDFGGGGMMLAFGMVAALLQARTTG 198
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D M EG++ L + + + W R NLLDGGA FY TYE DGRF+AV
Sbjct: 199 RGQVVDAAMTEGASLLAAMIWGFRAGGAWQDGRQANLLDGGAWFYGTYECADGRFLAVAP 258
Query: 237 LESQFYAQLLAGLGMTEEEL---PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+E +F L LG EL P + R +L + K + EW +F TDACV P
Sbjct: 259 IEGRFARTFLERLGPEAAELRQGPPADWPAQRTRLAGILRTKPRDEWVALFAGTDACVAP 318
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VL S+A HP R SF+ GV PAPAPR S +P PG T E+L
Sbjct: 319 VLDWSEAPEHPQARARESFV-TVGGVPQPAPAPRFSGSPAPRSSPPAR--PGADTAEILA 375
Query: 354 HFG 356
+G
Sbjct: 376 RWG 378
>gi|453083717|gb|EMF11762.1| alpha-methylacyl-CoA racemase [Mycosphaerella populorum SO2202]
Length = 426
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/310 (46%), Positives = 203/310 (65%), Gaps = 18/310 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----------PFVQDTVGYGKK 52
L G+ VLEFAGLAP P+ GM+ ++GA V+RID+ Q P D + K
Sbjct: 23 LAGLRVLEFAGLAPGPYAGMLCADYGAQVLRIDRAHPQAHSDEATSHPPPTPDQLTRHKS 82
Query: 53 SLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGY 111
S+ +N K +G++++K+L DV+++PFR GV+EK+ L P VL + N +LI AR++G+
Sbjct: 83 SIAVNTKTPQGIALIKDLVKHVDVLIDPFRPGVLEKMGLDPTSVLLRINSKLIVARMTGF 142
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
+DG Y MAGHDINY+ +SG+LS+LG + P PP NL DF GGG +C +GI++AL
Sbjct: 143 RRDGKYKDMAGHDINYIAVSGVLSMLGPAGQKPFPPTNLLGDFAGGGAVCFMGILLALLG 202
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
+ ++G+GQV++ NMV+GSA+L S T +W+ PRG N LDGGA +Y TYETKDG++
Sbjct: 203 KERTGQGQVVEANMVDGSAHLASMPRFGLKTPMWNAPRGTNTLDGGAPYYSTYETKDGKY 262
Query: 232 MAVGALESQFYAQLLAGLGM-------TEEELPQHEVETGRAKLTEKFKEKTQAEWCEIF 284
+AVGALE QFYA+LL GL + + L + + + FK+KT+AEW IF
Sbjct: 263 VAVGALEPQFYAELLKGLQVDASKYSWVKNRLDKQTWNDQKHAFEKLFKQKTRAEWEAIF 322
Query: 285 DNTDACVTPV 294
D TDACVTPV
Sbjct: 323 DGTDACVTPV 332
>gi|289767651|ref|ZP_06527029.1| fatty acid co-A racemase [Streptomyces lividans TK24]
gi|289697850|gb|EFD65279.1| fatty acid co-A racemase [Streptomyces lividans TK24]
Length = 387
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/361 (40%), Positives = 209/361 (57%), Gaps = 11/361 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ VLE AG+ P PF M+L + GA V+R+D+ P D K+S+ ++L
Sbjct: 17 LDGVRVLELAGIGPGPFAAMLLGDLGADVVRVDRPAPGPLAGDPAHDVTNRNKRSVLVDL 76
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G ++ LA ++D+++E +R GV E+L +GP+ +NP L+Y R++G+GQ GP +
Sbjct: 77 KSPGGPETVRALAARADILVEGYRPGVAERLGVGPEECMAANPALVYGRMTGWGQRGPLA 136
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ +G LS+LG + P P NL D+ GG L G++ AL +GRG
Sbjct: 137 PRAGHDIGYIATAGALSMLGAPDGPPAVPANLLGDYAGGSLYLTTGVLAALLTARTTGRG 196
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + W + RG NLLDGG +Y YET DG +MAVGALE
Sbjct: 197 QVVDAAIVDGTAHLTALFWGMLAAGTWREDRGTNLLDGGCPYYRVYETGDGGWMAVGALE 256
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
FY + LG++ + LP +A T +FK ++ EW +F+ TDACV PV
Sbjct: 257 PPFYTTFVTLLGLSGDALPDRSDPRNWPELQALFTARFKTASREEWTAVFEGTDACVAPV 316
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL +A HPH RG++ GV PAPAPR S TPGT ++ PG HT +V R
Sbjct: 317 LSLREAADHPHLTGRGTYT-EAHGVTQPAPAPRFSATPGTLRLPPA--VPGAHTADVARD 373
Query: 355 F 355
+
Sbjct: 374 W 374
>gi|111222800|ref|YP_713594.1| alpha-methylacyl-CoA racemase [Frankia alni ACN14a]
gi|111150332|emb|CAJ62029.1| Alpha-methylacyl-CoA racemase [Frankia alni ACN14a]
Length = 368
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L GI V+E AG+ P P M+L + GA V+R+ + G+ P + V G++ + +L
Sbjct: 11 LAGIRVVELAGIGPGPHAAMMLADLGADVVRVARPGSVPAPGVPAEPVQRGRRLVEADLG 70
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ +L +DV++E FR GV E+L LGPD + NPRL+Y R++G+GQ GP +
Sbjct: 71 DPASRDGVLDLIAGADVLIEGFRPGVTERLGLGPDDCARRNPRLVYGRMTGWGQQGPLAD 130
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
GHDINYL ++G+L+ +G P PP NL DFGGG +GI+ AL ER +SGRGQ
Sbjct: 131 RVGHDINYLSITGVLNAVGRAGEPPLPPLNLVGDFGGGSTYLVVGILAALVERERSGRGQ 190
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID +V+G++ L + + W+ RG N LD GA FYD Y T DGR+MAVGALE
Sbjct: 191 VIDAAIVDGASLLAHMVWGLRGRGRWNDERGSNRLDTGAPFYDVYATADGRYMAVGALEP 250
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA + GLG+ LP + R T+ F +T+ EW +FD DACVTPVL
Sbjct: 251 RFYATFVTGLGLDPATLPGQDDRARWPELREAFTKAFAGRTRDEWAAVFDPLDACVTPVL 310
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVL 352
+AT+HPH R I + AGV PAPAPR SR+ P ++ P V EVL
Sbjct: 311 DFDEATAHPHMAAREVLI-DVAGVTQPAPAPRFSRSVPAAPRVP---PRTAVTVAEVL 364
>gi|77465194|ref|YP_354697.1| fatty-acyl-CoA racemase [Rhodobacter sphaeroides 2.4.1]
gi|77389612|gb|ABA80796.1| putative fatty-acyl-CoA racemase; CoA-transferase family III
[Rhodobacter sphaeroides 2.4.1]
Length = 393
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 212/363 (58%), Gaps = 12/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQ---DTVGYGKKSLCI 56
L G+ ++E GL P PF M+L++ GA VIR+ A+ P + D + G++S+ I
Sbjct: 19 LAGLRIVEMVGLGPCPFAAMMLSDAGAEVIRVHPLAARAEIPLMDTEFDVLARGRRSIAI 78
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ +G++++ +LA ++D ++E FR GVME+L LGP NPRL+Y R++G+GQDGP
Sbjct: 79 DLKRPEGVALLLDLAERADGLMEGFRPGVMERLGLGPAECHARNPRLVYGRMTGWGQDGP 138
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHD+ Y+ LSG+L LG +R P P NL DFGGGG+M A G+V AL + +G
Sbjct: 139 LAATAGHDLTYIALSGVLGALGPADRPPAVPLNLIGDFGGGGMMLAFGMVAALLQARTTG 198
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D M EG++ L + + + W R NLLDGGA FY TYE DGRF+AV
Sbjct: 199 RGQVVDAAMTEGASLLAAMIWGFRAGGAWQDGRQANLLDGGAWFYGTYECADGRFLAVAP 258
Query: 237 LESQFYAQLLAGLGMTEEEL---PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+E +F L LG EL P + R +L + K + EW +F TDACV P
Sbjct: 259 IEGRFARTFLERLGPEAAELRQGPPADWPAQRTRLAGILRTKPRDEWVALFAGTDACVAP 318
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VL S+A HP R +F+ GV PAPAPR S PG PG T E+L
Sbjct: 319 VLDWSEAPEHPQARARETFV-TVGGVPQPAPAPRFSDFPGPRPSPPAR--PGADTAEILA 375
Query: 354 HFG 356
+G
Sbjct: 376 RWG 378
>gi|424861131|ref|ZP_18285077.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus
opacus PD630]
gi|356659603|gb|EHI39967.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus
opacus PD630]
Length = 395
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 232/383 (60%), Gaps = 16/383 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-------GKKSLC 55
L G+ V+E + P PFC M+L + GA VIR+D+ V + G++SL
Sbjct: 14 LSGMKVIEIGSIGPGPFCAMLLADLGADVIRVDRATGSGLVGPNADFRTELLHRGRRSLA 73
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G +V+ +L +DV++E FR GV E+L +GPD + N RLIY R++G+GQDG
Sbjct: 74 VDLKHPDGAAVVLSLVADADVLIEGFRPGVAERLGIGPDDCAQRNARLIYGRMTGFGQDG 133
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + GHDINY+ LSG LSL+G + PTPP +L DFGGGG++ ALG++ ALFE +S
Sbjct: 134 PLAQHVGHDINYVALSGALSLIGRHGQPPTPPLSLIGDFGGGGMLLALGVLSALFETQRS 193
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQV+D +MVEG+A L + T +W + RG N++D GA +YD YET DG+++AVG
Sbjct: 194 GLGQVVDASMVEGAALLATPFFGFAQTGVWGE-RGTNIVDSGAPYYDAYETADGKWLAVG 252
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACV 291
A+E FYA L+A L + ++LP + ++ + F + +T EW E + C+
Sbjct: 253 AMEPHFYADLVALLELP-DDLPDQNDRSQWPQMKKVFADAVRGRTLTEWLEAGEGLTPCI 311
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
+PVL + +A SHPH+V R +F+ + G+V PAPAPR SRT T + P PG HT E+
Sbjct: 312 SPVLEVDEAPSHPHHVARNAFV-DVDGLVQPAPAPRFSRTAAT--VDRRPPMPGEHTTEI 368
Query: 352 LRHFGYSDANIEELIREDVIEET 374
L +G + +R + E
Sbjct: 369 LTDWGIDPGRSADWLRSGAVREA 391
>gi|160900257|ref|YP_001565839.1| L-carnitine dehydratase/bile acid-inducible protein F [Delftia
acidovorans SPH-1]
gi|333913672|ref|YP_004487404.1| alpha-methylacyl-CoA racemase [Delftia sp. Cs1-4]
gi|160365841|gb|ABX37454.1| L-carnitine dehydratase/bile acid-inducible protein F [Delftia
acidovorans SPH-1]
gi|333743872|gb|AEF89049.1| Alpha-methylacyl-CoA racemase [Delftia sp. Cs1-4]
Length = 360
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 211/334 (63%), Gaps = 7/334 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+G+ V+EFAGL P PFC M+L + GA V+RI + G QD + + I+L+ +
Sbjct: 5 LEGVRVVEFAGLGPGPFCAMLLADMGAEVLRIARPGTPVDAQDITTRSRSQVEIDLRGEE 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + L ++D+++E FR GVME+L LGP+ NPRL+Y R++G+GQ GP + AG
Sbjct: 65 GQASALALIARADLLIEGFRPGVMERLGLGPEPCLARNPRLVYGRMTGWGQHGPLAHAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ +SG L +G P PP N DFGGGG++ A+G++ AL E +SGRGQVID
Sbjct: 125 HDINYIAISGALHAIGRAGEAPVPPLNYVGDFGGGGMLLAVGLLAALHEAGRSGRGQVID 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L +++ + W RGENLLDGGAHFYDTY DG+++A+GA+E QFY
Sbjct: 185 AAMTDGTALLSAFMYGFKAKGQWSNQRGENLLDGGAHFYDTYACADGKYIAIGAIEPQFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A+L G+ ++ L +++ R +L + F+ +T+ +WCE+ + +DAC PVL
Sbjct: 245 AELRQRCGI-QDPLFDAQLDAARWPLLKLRLADVFRTRTRQQWCELLEGSDACFAPVLDW 303
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+A H HN R +F GV+ PAPAPR SR+
Sbjct: 304 DEAPQHAHNRARATFT-EAGGVLQPAPAPRFSRS 336
>gi|21225078|ref|NP_630857.1| fatty acid co-A racemase [Streptomyces coelicolor A3(2)]
gi|4539189|emb|CAB39718.1| probable fatty acid co-A racemase [Streptomyces coelicolor A3(2)]
Length = 387
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/361 (40%), Positives = 209/361 (57%), Gaps = 11/361 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ VLE AG+ P PF M+L + GA V+R+D+ P D K+S+ ++L
Sbjct: 17 LDGVRVLELAGIGPGPFAAMLLGDLGADVVRVDRPAPGPLAGDPAHDVTNRNKRSVLVDL 76
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G ++ LA ++D+++E +R GV E+L +GP+ +NP L+Y R++G+GQ GP +
Sbjct: 77 KSPGGPETVRALAARADILVEGYRPGVAERLGVGPEECMAANPALVYGRMTGWGQRGPLA 136
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ +G LS+LG + P P NL D+ GG L G++ AL +GRG
Sbjct: 137 PRAGHDIGYIATAGALSMLGAPDGPPAVPANLLGDYAGGSLYLTTGVLAALLTARTTGRG 196
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + W + RG NLLDGG +Y YET DG +MAVGALE
Sbjct: 197 QVVDAAIVDGTAHLTALFWGMLAAGTWREDRGTNLLDGGCPYYRVYETGDGGWMAVGALE 256
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
FY + LG++ + LP +A T +FK ++ EW +F+ TDACV PV
Sbjct: 257 PPFYTTFVTLLGLSGDALPDRSDPRNWPELQALFTARFKTASREEWTAVFEGTDACVAPV 316
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL +A HPH RG++ GV PAPAPR S TPGT ++ PG HT +V R
Sbjct: 317 LSLREAADHPHLTGRGTYT-EAHGVTQPAPAPRFSATPGTLRLPPA--VPGAHTADVARD 373
Query: 355 F 355
+
Sbjct: 374 W 374
>gi|346974153|gb|EGY17605.1| alpha-methylacyl-CoA racemase [Verticillium dahliae VdLs.17]
Length = 400
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/313 (47%), Positives = 203/313 (64%), Gaps = 12/313 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ------PF-VQDTVGYGKKSLC 55
L G+ VLEFAGLAP PF GM+L + GA+V+RID+ Q P +D + K S+
Sbjct: 7 LTGLKVLEFAGLAPGPFAGMLLADAGASVLRIDRAVPQADGKGKPLPTEDMLARHKASIA 66
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G++++K L +D++++PFR GV+EKL LGPDVLC NPRLIY R++G+ +DG
Sbjct: 67 VDLKAPAGVALVKTLVASADMLIDPFRPGVLEKLGLGPDVLCALNPRLIYGRMTGFRRDG 126
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
Y++MAGHDINYL +SG L +LG P PP N+ ADF GGG G+++A+ R +
Sbjct: 127 KYAAMAGHDINYLAVSGALGVLGRDGEKPHPPWNILADFAGGGATLFQGLLLAVVARHAT 186
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQV++ NMV+G++YL ++ T L RG NLLDGG +YDTYET DGR+M+VG
Sbjct: 187 GRGQVVEANMVDGASYLTTFPRFALKTPLGSNGRGRNLLDGGCPYYDTYETSDGRYMSVG 246
Query: 236 ALESQFYAQLLAGLGMTEE--ELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDAC 290
ALE QFY L+ GLG+ + E + + + RA T+ F K + EW IFD TDAC
Sbjct: 247 ALEPQFYKALIRGLGLEGQGWEAKRQDPQVWPAMRALFTDVFLSKPRTEWEAIFDGTDAC 306
Query: 291 VTPVLSLSQATSH 303
TPVL + S
Sbjct: 307 CTPVLEYPELESE 319
>gi|453076031|ref|ZP_21978811.1| alpha-methylacyl-CoA racemase [Rhodococcus triatomae BKS 15-14]
gi|452761579|gb|EME19879.1| alpha-methylacyl-CoA racemase [Rhodococcus triatomae BKS 15-14]
Length = 367
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 202/336 (60%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L GI V+E AGL P P +L + GA V+RI + G P +D + G++ NLK
Sbjct: 13 LAGIRVVELAGLGPGPHAATLLADLGADVVRIQRAGQLPSPDRPRDQILRGRRISEANLK 72
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + L ++DV++E FR GV E++ LGP+V + NPRL+Y R++G+GQ+GP +
Sbjct: 73 DPADIEKVLGLLERADVLIEGFRPGVTERMGLGPEVALERNPRLVYGRMTGWGQEGPLAQ 132
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L +G P PP N+ DFGGG + GI+ AL ER SG+GQ
Sbjct: 133 AAGHDINYISLTGVLHAIGREGERPVPPLNMVGDFGGGSMFLIFGILAALVERQTSGKGQ 192
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G+A L + + +W RG N+LD GA +YDTYET DGR+MAVGA+E
Sbjct: 193 VVDAAMVDGTAALSHMIWSFRGAGVWSDERGTNMLDTGAPYYDTYETSDGRYMAVGAIEP 252
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL L + LP + R TE F KT+ EW IF TDAC +PVL
Sbjct: 253 QFYAELLRLLELDPAALPAQNDKAAWPELRKVFTETFLSKTRDEWSAIFLGTDACASPVL 312
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A + H RG+ + + GVV PAPR SRT
Sbjct: 313 TFAEAPENEHLAARGTLV-DLDGVVQHRPAPRFSRT 347
>gi|302555499|ref|ZP_07307841.1| fatty acid-CoA racemase [Streptomyces viridochromogenes DSM 40736]
gi|302473117|gb|EFL36210.1| fatty acid-CoA racemase [Streptomyces viridochromogenes DSM 40736]
Length = 393
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 215/361 (59%), Gaps = 12/361 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 24 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLAIDPAYDVTNRNKRSVVVDL 83
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +L ++DV++E +R GV E+L +GP NPRL+Y R++G+GQDGP +
Sbjct: 84 KSPDGPARVLDLVARADVLVEGYRPGVAERLGVGPGDCHARNPRLVYGRMTGWGQDGPLA 143
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ +G L ++G + P P NL D+ GG L +G++ AL +G G
Sbjct: 144 QRAGHDIAYIAPTGTLGMIGRPDEPPAVPANLLGDYAGGSLYLVVGVLAALHHARATGTG 203
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+++L + + W RG NLLDGG +Y TYET DGR MAVGALE
Sbjct: 204 QVVDAAIVDGASHLATMIHGMLAAGGWQDRRGANLLDGGCPYYGTYETADGRHMAVGALE 263
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
S+FYAQ LA LG+ + + +V R ++ +FK +T+ EW +F+ +DACV PVL
Sbjct: 264 SRFYAQFLALLGIEDRAEARKDVSQWGELREQVAIRFKTRTRDEWTAVFEGSDACVAPVL 323
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SL +A HPH RG+F + G+ PAPAPR S TP + + PA PG T EV R
Sbjct: 324 SLREAPHHPHLAARGTFT-DHGGITQPAPAPRFSATPTSVRT---GPAQPGADTAEVARD 379
Query: 355 F 355
+
Sbjct: 380 W 380
>gi|433649588|ref|YP_007294590.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
smegmatis JS623]
gi|433299365|gb|AGB25185.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
smegmatis JS623]
Length = 364
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 211/338 (62%), Gaps = 10/338 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-----QDTVGYGKKSLCIN 57
L G+ V+E AG+ P P M+L + GA V+R+++ G P +D + ++S+ +
Sbjct: 5 LHGLRVVELAGIGPGPHAAMLLGDLGADVVRVERPGKDPGPATEPGRDYLLRNRRSVTAD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G + L ++DV++E FR GV E+L LGP K N +LIY R++G+GQ GP
Sbjct: 65 LKSDEGREFVLQLVAKADVLIEGFRPGVTERLGLGPQDCAKVNEKLIYGRMTGWGQTGPR 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
S AGHDINY+ L+G+L +G P PP NL DFGGG + +GI+ AL+ER +SG
Sbjct: 125 SQQAGHDINYISLNGVLHAVGRAGERPVPPLNLVGDFGGGSMFLVVGILSALWERERSGH 184
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQ+ID MV+GS+ L + + + +W RG N+LD GA +YDTY DGR+++VG++
Sbjct: 185 GQIIDAAMVDGSSVLSTMMWAFRGMGMWSDERGVNMLDTGAPYYDTYTCADGRYVSVGSI 244
Query: 238 ESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QF+A+LL LG+ ++LP Q++V RAKLTE F + + W ++F ++DACV P
Sbjct: 245 EPQFFAELLDKLGLDAKDLPDQNDVSRWPELRAKLTEMFASQDRDHWAKVFADSDACVAP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
VLS ++ + PHN R +F + P+PAPR SRT
Sbjct: 305 VLSFAEVETEPHNTERDTFY-RENDYLYPSPAPRFSRT 341
>gi|408682128|ref|YP_006881955.1| Alpha-methylacyl-CoA racemase [Streptomyces venezuelae ATCC 10712]
gi|328886457|emb|CCA59696.1| Alpha-methylacyl-CoA racemase [Streptomyces venezuelae ATCC 10712]
Length = 385
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 214/362 (59%), Gaps = 13/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G +D K+S+ ++L
Sbjct: 12 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLGIDPARDLTNRNKRSVLVDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + +L ++D+++E +R GV E+L +GPD NPRL+Y R++G+GQDGP +
Sbjct: 72 KDERGPGTVLDLVEKADILVEGYRPGVAERLGVGPDACLARNPRLVYGRMTGWGQDGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWR-NRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI Y+ ++G L ++G + PT P NL D+ GG L +G++ AL G
Sbjct: 132 ATAGHDIGYIAITGALGMIGPDPDGPPTVPANLVGDYAGGSLYLVIGVLAALQHARAHGE 191
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + + W RG NLLDGG FY YET DG MAVGAL
Sbjct: 192 GQVVDAAIVDGTAHLTTMIHGMLAAGGWQDRRGVNLLDGGCPFYGVYETADGGHMAVGAL 251
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E QFYA+ LG+ E + + R + ++F+ +T+ EW +F+ TDACV PV
Sbjct: 252 EEQFYAEFTRLLGIEEAAPARRDFGRWPELRKAVADRFRSRTREEWTSVFEGTDACVAPV 311
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL +A +HPH R +F R G+ PAPAPR S TPGT + PA PG T EV R
Sbjct: 312 LSLREAPAHPHLAARATFT-ERDGIAQPAPAPRFSATPGTLRT---GPALPGADTAEVAR 367
Query: 354 HF 355
+
Sbjct: 368 DW 369
>gi|254514066|ref|ZP_05126127.1| alpha-methylacyl-CoA racemase [gamma proteobacterium NOR5-3]
gi|219676309|gb|EED32674.1| alpha-methylacyl-CoA racemase [gamma proteobacterium NOR5-3]
Length = 377
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/372 (44%), Positives = 229/372 (61%), Gaps = 14/372 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH--GAQPFVQDTVGYGKKSLCINLKK 60
L G TV+E AG+ PAP GM+L + GA VIR+D+ A ++ G GKKS+ +NLK
Sbjct: 4 LNGYTVIELAGIGPAPMGGMMLADLGAEVIRVDRAVADAPSPLESVSGRGKKSVVLNLKS 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ + + +DVI++PFR GV EKL +GP V NP+LI+AR++G+GQDGP +S
Sbjct: 64 EQGVEALLRMVENADVIIDPFRPGVCEKLGVGPKVCLARNPKLIFARMTGWGQDGPLASA 123
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G L G P PP NL D GGGG++ G++ AL E + SG+GQV
Sbjct: 124 AGHDINYIALTGALFANGEAAGRPMPPLNLVGDMGGGGMLLVNGVLAALLETASSGQGQV 183
Query: 181 IDCNMVEGSAYLGSWLTRTQDTF-LWD-KPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
ID MV+G+A L W+ T LW+ + R N+LDGG H+Y+TYE DG ++++G++E
Sbjct: 184 IDVAMVDGAAQL-MWMFHTFGAAGLWNAQQREANMLDGGTHYYNTYECADGEYVSIGSIE 242
Query: 239 SQFYAQLLAGLGMTEEEL-----PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
QFYA LL G++E + P+ E +A L + ++KT+ EWCE+ + TD C P
Sbjct: 243 PQFYALLLEKAGLSESDFAEQNNPERWPEQKQA-LGDVIRQKTRDEWCELMEGTDVCFAP 301
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VL ++A H R S+I GVV PAPAPR SRTP SK+ A G T+ VL
Sbjct: 302 VLRFTEAPQHSAARARNSYI-ELDGVVQPAPAPRFSRTP--SKVEHAAHANGADTQSVLG 358
Query: 354 HFGYSDANIEEL 365
G+++ I L
Sbjct: 359 AMGFAEQEIAAL 370
>gi|326775305|ref|ZP_08234570.1| Alpha-methylacyl-CoA racemase [Streptomyces griseus XylebKG-1]
gi|326655638|gb|EGE40484.1| Alpha-methylacyl-CoA racemase [Streptomyces griseus XylebKG-1]
Length = 379
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 205/337 (60%), Gaps = 8/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 12 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGIGIAPASDLTNRNKRSVLLDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + +L ++D+++E +R GV E+L +GPD NPRL+Y R++G+GQDGP +
Sbjct: 72 KGDEGPARVLDLVERADILIEGYRPGVAERLGVGPDACLARNPRLVYGRMTGWGQDGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI YL LSG LS++G + P P NL D+ GG L +G++ AL G G
Sbjct: 132 ERAGHDIAYLALSGTLSMIGKPDEPPVVPANLVGDYAGGSLYLVVGVLAALQHARGHGEG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TY T DG MAVG LE
Sbjct: 192 QVVDAAIVDGAAHLATMIHGMLAAGSWQDRRGANLLDGGCPFYGTYATSDGGHMAVGPLE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+ A LG+ + + ++ + RA + E+F +T+AEW E+FD TDACV PVL
Sbjct: 252 EKFYAEFAALLGIADAFPDRWDLARWDELRAAVAERFSTRTRAEWTEVFDGTDACVAPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
SL++A HPH R +F+ G+ PAPAPR S TP
Sbjct: 312 SLTEAPHHPHLAARSTFV-EHGGLTQPAPAPRFSATP 347
>gi|357388833|ref|YP_004903672.1| putative alpha-methylacyl-CoA racemase [Kitasatospora setae
KM-6054]
gi|311895308|dbj|BAJ27716.1| putative alpha-methylacyl-CoA racemase [Kitasatospora setae
KM-6054]
Length = 404
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 211/360 (58%), Gaps = 10/360 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ VLE AG+ P PF M+L + GA V+R+D+ G Q +D K+S+ ++L
Sbjct: 11 LAGVRVLELAGIGPGPFATMLLADLGADVVRVDRPGGQGLGPEPARDLTNRNKRSVLLDL 70
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + +++LA ++D+++E +R GV E+L +GP NP L+Y R++G+GQDGP +
Sbjct: 71 KTDAGAAAVRDLAARADLLVEGWRPGVAERLGVGPADCLARNPALVYGRMTGWGQDGPLA 130
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+ YL SG+L L+G + P P NL D+ GG L +G++ AL +G G
Sbjct: 131 PRAGHDVTYLATSGLLGLIGPADGPPAIPANLLGDYAGGSLYLVVGLLAALHHARATGTG 190
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + L D LW RG NLLDGGA +Y TY T DG +MAVG LE
Sbjct: 191 QVVDAAIVDGAAHLSTMLWALMDAGLWHDRRGVNLLDGGAPWYGTYPTSDGGWMAVGPLE 250
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA+ L + + Q+++ RA + +F +T+AEW E+F DACV PVL
Sbjct: 251 PHFYAEFARLLELGPDAPDQYDLPRWPELRAAIAARFATRTRAEWTELFAGHDACVAPVL 310
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+L +A HPH RGS+ G PAPAPR S TP + PG HT EV R +
Sbjct: 311 ALREAAEHPHLAARGSYT-EHGGTPQPAPAPRFSATPAALRTPPA--VPGAHTAEVARDW 367
>gi|94314454|ref|YP_587663.1| alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
gi|93358306|gb|ABF12394.1| Alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
Length = 373
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 222/348 (63%), Gaps = 12/348 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-DTVGYGKKSLCINLKKA 61
L G+ V+E AG+ P PF M+L++ GA V+RID+ A+ + D VG G+K++ ++LKK
Sbjct: 13 LAGLRVIEIAGIGPGPFACMLLSDLGAEVVRIDRSDAKLGDRFDIVGRGRKTVLLDLKKQ 72
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ + +L +++DV++E FR GVME+L LGP + K NP+L+Y R++G+GQDGP + A
Sbjct: 73 TDVEKVLDLVSEADVLVEGFRPGVMERLGLGPADVEKRNPKLVYGRMTGWGQDGPLAQAA 132
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ +SG L+ +G R P PP NL D+GGG L +GI+ A+FE +SG+GQV+
Sbjct: 133 GHDINYIAISGALAGIGEAGRAPVPPLNLVGDYGGGSLYLVVGILAAVFEAQRSGKGQVV 192
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D + +G+ L S + + + N LDGGA +Y +YET D ++++VG +E +F
Sbjct: 193 DAAICDGAVSLTSLFHTQLLRGHYVEKKASNTLDGGAPYYKSYETSDHQYISVGPIEPKF 252
Query: 242 YAQLLAGLGMTEEELPQHEVETGRAKLTEK-----FKEKTQAEWCEIFDNTDACVTPVLS 296
+A L LG+ ++L + + R EK F+ T+A WCE+ + TDAC PVL+
Sbjct: 253 FALLCEKLGVP-DDLQKSQNNRERWSELEKFFGRTFRTNTRAHWCELLEGTDACFAPVLT 311
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP 344
LS+A HPH +R SF+ + GV PAPAPR SRTPG+ + PAP
Sbjct: 312 LSEAEMHPHLQYRKSFV-SVGGVQQPAPAPRFSRTPGSVQ----GPAP 354
>gi|33603741|ref|NP_891301.1| racemase [Bordetella bronchiseptica RB50]
gi|412340936|ref|YP_006969691.1| racemase [Bordetella bronchiseptica 253]
gi|33577866|emb|CAE35131.1| putative racemase [Bordetella bronchiseptica RB50]
gi|408770770|emb|CCJ55568.1| putative racemase [Bordetella bronchiseptica 253]
Length = 381
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/369 (39%), Positives = 217/369 (58%), Gaps = 13/369 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-------QPFVQDTVGYGKKSLC 55
L G+ V+EF + PAP C M+L + GATVIR+++ +P + + + +
Sbjct: 4 LAGLKVVEFPAIGPAPMCAMLLADMGATVIRLERQQPSADLGVERPLKYNLLLRNRPGIS 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK +G + L +DV+LE FR G ME++ GPD + NPRL+Y R++G+GQ G
Sbjct: 64 VDLKAPEGAQFAQALLESADVLLEGFRPGTMERMGFGPDACLRKNPRLVYGRMTGWGQTG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
PY++MAGHD+NY+ ++G L +G + + PTPP NL DFGGG L A+G++ A+F +
Sbjct: 124 PYAAMAGHDLNYIAMTGALDAIGRKGQPPTPPLNLVGDFGGGALYLAMGVLAAVFAARGT 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQV+D MV+G+A L + L++ RG N+LD GA +YD Y DG+++++
Sbjct: 184 GKGQVVDAAMVDGAASLMTPFFGMAAAGLFNAERGTNVLDSGAPYYDVYRCADGKYLSIA 243
Query: 236 ALESQFYAQLLAGLGMTEEELPQH-EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+E++F L + Q + + R + + +TQA+WCE FD TDACV PV
Sbjct: 244 PIEARFRRIFFEKLDLDAPAGDQRADWDALREAIAARIATRTQAQWCECFDGTDACVAPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG-VHTREVLR 353
LS+++A SHPHN R +F+ + GVV PAPAPR TP T P P + L
Sbjct: 304 LSIAEAPSHPHNQARATFL-DIDGVVQPAPAPRFGATP---LATPRPPEPANSRFEQCLG 359
Query: 354 HFGYSDANI 362
+G S A+I
Sbjct: 360 EWGMSAADI 368
>gi|158316294|ref|YP_001508802.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
gi|158111699|gb|ABW13896.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
Length = 389
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/383 (40%), Positives = 218/383 (56%), Gaps = 16/383 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG--AQPFVQD----TVGYGKKSLCI 56
L G VLE AG P PF GM+L + GA ++RID+ A+P D G++S+ +
Sbjct: 10 LAGTRVLEIAGRGPGPFAGMLLADMGAEILRIDRPDPPARPQAPDHRLELYNRGRRSVVV 69
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK G V+ L ++D I E +R GV E+L +GPD + NPR++Y R +G+GQ GP
Sbjct: 70 DLKHGAGPEVVLRLVERADAIYEGYRPGVAERLGIGPDACLQRNPRIVYGRGTGWGQTGP 129
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+ L+G L LG+ P P NL D+ GGG+M A GIV AL E SG
Sbjct: 130 LADKAGHDINYIALAGALDPLGYAGGPPAIPLNLIGDYAGGGMMLAFGIVCALLEARGSG 189
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D MV+G++ L + + W RG N +D GA FY+ YET D R++A+GA
Sbjct: 190 RGQVVDAAMVDGASLLMTLYHGRRMMGTWSDERGTNYVDSGAPFYNVYETSDHRYVAIGA 249
Query: 237 LESQFYAQL-------LAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDA 289
+E +F L L G+ M + + + R +L F +T+ EW ++ + D
Sbjct: 250 IEPKFQRVLFDAIGVDLDGITMPVSTIDRTDWAELRRRLAAVFVTRTRDEWTKLLADVDG 309
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
C +PVLSL + ++HPH+ R F P G+ PAPAPR RTP + I P PG HTR
Sbjct: 310 CYSPVLSLGEVSAHPHHQARAGF-PELDGIPHPAPAPRFGRTP--AAIRTAPPRPGEHTR 366
Query: 350 EVLRHFGYSDANIEELIREDVIE 372
E L +G++D ++ L R+ I
Sbjct: 367 EALADWGFTDDELQTLHRDGAIR 389
>gi|404423610|ref|ZP_11005247.1| alpha-methylacyl-CoA racemase [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403653793|gb|EJZ08756.1| alpha-methylacyl-CoA racemase [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 360
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 212/336 (63%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L G+ V+E G+ P P M+L++ GA V+R+ + G + V GK+ + +++K
Sbjct: 7 LAGVRVIELGGIGPGPHAAMMLSDLGADVVRVRRPGGLTMPAENVDLMHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G + +L ++DV+L+ FR G E+L +GP NPRLI+AR++G+GQDGP ++
Sbjct: 67 SEPG--KLLDLVAKADVLLDCFRPGTCERLGIGPADCEAVNPRLIFARITGWGQDGPLAT 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G LS +G+R+R P P NL ADFGGG ++ +GIV AL+ER KSG+GQ
Sbjct: 125 TAGHDINYLSQTGALSAIGYRDRPPVAPLNLVADFGGGSMLVLVGIVTALYEREKSGKGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + T R LLDGGA +Y TYET DG +MAVG++E
Sbjct: 185 VIDAAMVDGVSMLAQMMWTMRATGSLRDERESFLLDGGAPYYRTYETSDGGYMAVGSIEP 244
Query: 240 QFYAQLLAGLGMTEEELP-QHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+AQL+AGLG+ E+P Q E+ + RA TE+F KT+ EW +IF TDACVTPVL
Sbjct: 245 QFFAQLVAGLGLDAAEIPGQFELARYDEMRAIFTERFATKTRDEWTKIFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ +A H V R + + GV APAPR SRT
Sbjct: 305 TWGEAAEGEHLVARSTLV-TVDGVAQAAPAPRFSRT 339
>gi|183984649|ref|YP_001852940.1| fatty-acid-CoA racemase Far [Mycobacterium marinum M]
gi|183177975|gb|ACC43085.1| fatty-acid-CoA racemase Far [Mycobacterium marinum M]
Length = 359
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 207/336 (61%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVKVIELGGIGPGPHAGMVLADLGADVVRVRRPGGLQMPAEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +
Sbjct: 67 SQP--QALLELAAKADVLLDCFRPGTCERLGIGPDDCAAVNPRLIFARITGWGQDGPLAP 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G LS LG+R+R PTPP NL ADFGGG ++ LGI+ AL+ER +SG+GQ
Sbjct: 125 TAGHDINYLSQTGALSALGYRDRPPTPPLNLVADFGGGSMLVLLGIMAALYERERSGQGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + R LLDGGA FY YET DG+ MAVGA+E
Sbjct: 185 VIDAAMVDGVSVLAQMMWTMKGIGSLRDERESFLLDGGAPFYRCYETSDGKHMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LLAGLG++ E+P R +E+F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLAGLGLSAAEVPSQLDIAAYPKMREMFSERFASRTRDEWAAVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
S+A + H R + I + GV APAPR SRT
Sbjct: 305 KWSEAAASDHLRARSTVI-SAHGVEQAAPAPRFSRT 339
>gi|440638958|gb|ELR08877.1| hypothetical protein GMDG_03547 [Geomyces destructans 20631-21]
Length = 406
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 224/371 (60%), Gaps = 29/371 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQ--PFVQDTVGYGKKSL 54
L G+ VLEFAGLAP PF G++L + GA+VIRID+ H + P D + K S+
Sbjct: 7 LTGVRVLEFAGLAPGPFAGLLLADNGASVIRIDRAVPGSTHSDKLPPPTTDALTRHKSSI 66
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK G+ +K L SD++++PFR GV+EKL LGP L NPR+I R++G+ +D
Sbjct: 67 AVDLKDPSGVEFVKTLVKNSDIVIDPFRPGVLEKLGLGPSDLKAVNPRIILGRMTGFRRD 126
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
G Y MAGHDINY+ +SG LSLLG + P P N+ DF GGG G+++AL R +
Sbjct: 127 GKYKDMAGHDINYIAVSGALSLLGRKGEKPFGPVNILGDFAGGGATLFQGLLLALLARER 186
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
+G GQV++ NMV+GSAYL ++ + T + + PRG+N+LD G+ FYDTYETKDG+++AV
Sbjct: 187 TGEGQVVEANMVDGSAYLATFPRLARKTPMMNGPRGDNMLDSGSPFYDTYETKDGKYVAV 246
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDA 289
G LE QF+ +L+ GLG+ L + + R T FKEKT+ EW +FD TDA
Sbjct: 247 GPLEPQFFHELVKGLGLEGRGLEETRYDRSTWPEMRELFTRLFKEKTRTEWEGVFDGTDA 306
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA---PGV 346
CVTPVL L + + P+R G V P+ L+ TPG + I NP+ P
Sbjct: 307 CVTPVLDLDELETD----------PSREGDVRPSVT--LTGTPGLA-IKRDNPSTRDPAT 353
Query: 347 HTREVLRHFGY 357
E +R G+
Sbjct: 354 GQGEGVRGDGW 364
>gi|441215718|ref|ZP_20976648.1| fatty-acid-CoA racemase [Mycobacterium smegmatis MKD8]
gi|440624800|gb|ELQ86659.1| fatty-acid-CoA racemase [Mycobacterium smegmatis MKD8]
Length = 351
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 212/334 (63%), Gaps = 10/334 (2%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLKKAK 62
+ V+E G+ P P M+L++ GA V+R+ + G + V GK+ + +++K
Sbjct: 1 MRVVELGGIGPGPHAAMMLSDLGADVVRVRRPGGLTLPAENVDLLHRGKRIVDLDVKAEP 60
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ + +L ++DV+L+ FR G E+L +GP NPRLI+AR++G+GQDGP + AG
Sbjct: 61 --AKLLDLVAKADVLLDCFRPGTCERLGIGPKECEAVNPRLIFARITGWGQDGPLAQTAG 118
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYL +G LS +G+R+R P P NL ADFGGG ++ +GIV AL+ER +SG+GQVID
Sbjct: 119 HDINYLSQTGALSAIGYRDRPPVAPMNLVADFGGGSMLVLVGIVSALYERERSGKGQVID 178
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + L + + T R LLDGGA FY YET DG +MAVG++E QF+
Sbjct: 179 AAMVDGVSMLAQMMWTMRATGSLRDERESFLLDGGAPFYRCYETADGGYMAVGSIEPQFF 238
Query: 243 AQLLAGLGMTEEELP-QHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
AQL+AGLG+ +E+P Q E+ + R TE+FK KT+AEW EIF TDACVTPVL+
Sbjct: 239 AQLVAGLGLAADEIPGQFEIGRYDEMRKIFTERFKTKTRAEWTEIFAGTDACVTPVLTWG 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A + H R + I + GV APAPR SRTP
Sbjct: 299 EAAENAHLRERSTLI-DVDGVAQAAPAPRFSRTP 331
>gi|420954626|ref|ZP_15417866.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0107]
gi|420960164|ref|ZP_15423394.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-1231]
gi|420990608|ref|ZP_15453761.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0307]
gi|420996429|ref|ZP_15459570.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0912-R]
gi|392190630|gb|EIV16260.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0912-R]
gi|392190793|gb|EIV16421.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0307]
gi|392256232|gb|EIV81691.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-1231]
gi|392256419|gb|EIV81876.1| fatty-acid-CoA racemase [Mycobacterium massiliense 2B-0107]
Length = 350
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 211/334 (63%), Gaps = 10/334 (2%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKAKGL 64
+ V+E G+ P P M+L++ GA VIR+ + G ++T + + +NL K
Sbjct: 1 MKVIELGGIGPGPHAAMMLSDLGADVIRVRRPGGLAIPAEETDLFHRGKRLVNLDVKKDP 60
Query: 65 SVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHD 124
+ L +++DV+L+PFR GV E++ +GPD K NPRLI+AR++G+GQ GP + AGHD
Sbjct: 61 EALLALVDKADVLLDPFRPGVCERIGIGPDECAKRNPRLIFARMTGWGQHGPMADRAGHD 120
Query: 125 INYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCN 184
INYL L+G L +G+++R P PP NL ADFGGG ++ GI+ AL+ER KSG+GQVID
Sbjct: 121 INYLSLTGALGSMGYKDRPPMPPMNLVADFGGGSMLLVQGILAALYEREKSGKGQVIDGA 180
Query: 185 MVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + L W T + L+D+ R LLDGG+ FY TYET DG++MAVG++E QF+
Sbjct: 181 MVDGVSQLAQMQW-TMYNNGLLFDE-REAGLLDGGSPFYGTYETSDGKYMAVGSIEPQFF 238
Query: 243 AQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L+ GLG+ E +P + R + FK KT+ EW EIF TDACV+PVL+
Sbjct: 239 AILVQGLGLDPESVPFQLDKARYPEMRKMFDDAFKTKTRDEWTEIFIGTDACVSPVLTWG 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A + H RG+ + + GV APAPR SRTP
Sbjct: 299 EAKQNEHLRDRGTIV-DVDGVTQAAPAPRFSRTP 331
>gi|375139759|ref|YP_005000408.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
rhodesiae NBB3]
gi|359820380|gb|AEV73193.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
rhodesiae NBB3]
Length = 359
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 212/337 (62%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L G+ V+E G+ P P M+L + GA V+R+ + G + V GK+++ +++K
Sbjct: 7 LAGVKVIELGGIGPGPHAAMVLADLGADVVRVRRPGGLAMPAENVDLMHRGKRTVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K + +LA ++DV+L+ FR G E+L +GPD NPRL++AR++G+GQDGP +
Sbjct: 67 KDP--QALLDLAAKADVLLDCFRPGTCERLGIGPDDCAAVNPRLVFARITGWGQDGPLAM 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G LS +G+R+R P P NL ADFGGG ++ LGIV AL+ER SG+GQ
Sbjct: 125 TAGHDINYLSQTGALSAIGFRDRPPVAPLNLVADFGGGSMLVLLGIVTALYEREHSGKGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + R +LDGGA FY TYET DG++MAVG++E
Sbjct: 185 VIDAAMVDGVSILAQMMWTIKAGGTLKDERESFMLDGGAPFYRTYETADGKYMAVGSIEP 244
Query: 240 QFYAQLLAGLGMTEEELP-QHEVET---GRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+AQLL GLG++ +++P Q +V R TE+F KT+ W +F TDACVTPVL
Sbjct: 245 QFFAQLLDGLGLSPDDVPGQFDVAAYPEMRRVFTERFASKTRDGWTAVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ ++A + H + R + I GV APAPR SRTP
Sbjct: 305 TWTEAAHNEHLLARSTVI-TAHGVEQAAPAPRFSRTP 340
>gi|365863664|ref|ZP_09403373.1| putative fatty acid-CoA racemase [Streptomyces sp. W007]
gi|364006900|gb|EHM27931.1| putative fatty acid-CoA racemase [Streptomyces sp. W007]
Length = 382
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 207/337 (61%), Gaps = 8/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 12 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLGIDPASDLTNRNKRSVLLDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + +L ++D+++E +R GV E+L +GP+ NP+L+Y R++G+GQDGP +
Sbjct: 72 KSDEGPARVLDLVERADILIEGYRPGVAERLGVGPEACLARNPKLVYGRMTGWGQDGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI YL L+G LS++G + P P NL D+ GG L +G++ AL G G
Sbjct: 132 ERAGHDIAYLALTGTLSMIGKPDEPPVVPANLVGDYAGGSLYLVVGVLAALQHARAHGEG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TY T DG MAVG LE
Sbjct: 192 QVVDAAIVDGAAHLATMIHGMLAAGSWQDRRGTNLLDGGCPFYGTYATSDGGHMAVGPLE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+ + LG+ + + ++ + RA +TE+F +T+AEW E+FD TDACV PVL
Sbjct: 252 GQFYAEFIGLLGIADAFPDRWDLARWDELRAAVTERFLTRTRAEWTEVFDGTDACVAPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
SL++A HPH R +F+ +G+ PAPAPR S TP
Sbjct: 312 SLTEAPHHPHLAARSTFV-EHSGLTQPAPAPRFSATP 347
>gi|328544130|ref|YP_004304239.1| fatty-acyl-CoA racemase; CoA-transferase family III [Polymorphum
gilvum SL003B-26A1]
gi|326413873|gb|ADZ70936.1| Putative fatty-acyl-CoA racemase; CoA-transferase family III
[Polymorphum gilvum SL003B-26A1]
Length = 380
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 166/379 (43%), Positives = 227/379 (59%), Gaps = 13/379 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ------DTVGYGKKSLCI 56
L G+ ++E GL PAPFC M+L++ GA V+R+ GA+P V D + G++SL I
Sbjct: 5 LTGLRLIEMVGLGPAPFCAMMLSDMGAEVVRVHAKGARPAVPLIDTEFDVLARGRRSLAI 64
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK A + +L ++D ++E FR GVME+L LGPDV NPRL+Y R++G+GQDGP
Sbjct: 65 DLKVAGAREALLDLVEKADGLVEGFRPGVMERLGLGPDVCLACNPRLVYGRMTGWGQDGP 124
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDI Y+ L+G+L +G ++R P P NL DFGGGGL+ A G+V AL E ++SG
Sbjct: 125 LAPTAGHDITYIALAGVLHAIGPKDRPPAVPLNLVGDFGGGGLLLAFGMVCALLETARSG 184
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQVID M +G+A LG+ ++ + W R NLLDG AHFY TY KDGR++AVGA
Sbjct: 185 QGQVIDAAMTDGAALLGAMMSGFKAGGGWSNAREANLLDGAAHFYGTYACKDGRYLAVGA 244
Query: 237 LESQFYAQLLAGLGMTEEEL-PQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +FY L LG+ PQ++ R +L F ++ + W +F +DACV
Sbjct: 245 IEPKFYRLFLDMLGLDPAAFEPQNDPARWPEFRQRLAAVFAQEPRDHWAALFAGSDACVA 304
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL +A +HPHN RG+++ AGV PAPAPR SRT P PG T VL
Sbjct: 305 PVLDWDEAMAHPHNAARGTYV-TVAGVPQPAPAPRFSRT--VPDRPAPPPQPGADTLAVL 361
Query: 353 RHFGYSDANIEELIREDVI 371
+G A I L I
Sbjct: 362 ADWGLDAARIAALTASGAI 380
>gi|226365035|ref|YP_002782818.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus B4]
gi|226243525|dbj|BAH53873.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus B4]
Length = 365
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 208/336 (61%), Gaps = 7/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L GI V+EFAGL P P +L + GA V+ + + G P D + G++ + NLK
Sbjct: 12 LAGIRVVEFAGLGPGPHAAALLADLGADVVCVQRPGVIPPDGPYDQIQRGRRVVEANLKD 71
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ + + L ++DV++E FR GV E++ LGPDV K N RL+Y R++G+GQ+GP +S
Sbjct: 72 PEQVEKVLGLIERADVVIEGFRPGVTERMGLGPDVCLKRNERLVYGRMTGWGQEGPLASA 131
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQV
Sbjct: 132 AGHDINYISLTGVLHAIGRKGERPVPPLNMVGDFGGGSMFLIFGILSALVERQSSGKGQV 191
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+G+ L + + +W RG NLLD GA FYDTYET DG++MAVG++E Q
Sbjct: 192 VDAAMVDGALALSHMMWAFRGRGVWSDERGVNLLDTGAPFYDTYETSDGKYMAVGSIEPQ 251
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL GL + ELPQ + ++ EKF KT+ EW +F TDACV+PVL+
Sbjct: 252 FYALLLQGLELDPAELPQQMDMSAWPQMKKVFAEKFLSKTRDEWAAVFLGTDACVSPVLT 311
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
++A S+ H RGS I GV APAPR SRTP
Sbjct: 312 FAEAPSNEHLAARGSLI-ELDGVTQHAPAPRFSRTP 346
>gi|443622522|ref|ZP_21107045.1| putative Fatty acid-CoA racemase [Streptomyces viridochromogenes
Tue57]
gi|443343982|gb|ELS58101.1| putative Fatty acid-CoA racemase [Streptomyces viridochromogenes
Tue57]
Length = 362
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 214/357 (59%), Gaps = 12/357 (3%)
Query: 8 VLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDT----VGYGKKSLCINLKKAKG 63
++E AG+ P PF M+L + GA V+R+D+ G DT K+S+ ++LK G
Sbjct: 1 MVELAGIGPGPFAAMLLADLGADVVRVDRPGGTGLAIDTEYDITNRNKRSVIVDLKSPDG 60
Query: 64 LSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGH 123
+ + +LA ++D+++E +R GV E+L +GP+ NPRL+Y R++G+GQ+GP + AGH
Sbjct: 61 PARVLDLAARADILVEGYRPGVAERLGVGPEACHARNPRLVYGRMTGWGQEGPLAHRAGH 120
Query: 124 DINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDC 183
DI Y+ ++G L ++G + P P NL D+ GG L +G++ AL +G GQV+D
Sbjct: 121 DIAYIAVTGTLGMIGSPDEPPAVPANLVGDYAGGSLYLVVGVLAALHHARATGTGQVVDA 180
Query: 184 NMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYA 243
+V+G+++L + + W RG NLLDGG +Y TYET DG++MAVGALE QFYA
Sbjct: 181 AIVDGTSHLAAMIHGMLAAGGWQDRRGANLLDGGCPYYGTYETADGKYMAVGALEPQFYA 240
Query: 244 QLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
+ L LG+ E + + RA + +FK +T+ EW +F+ +DACV PVLSL +A
Sbjct: 241 EFLRLLGIEEHASARKDWSRWGELRAAVAARFKSRTRQEWTAVFEGSDACVAPVLSLREA 300
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRHFG 356
HPH RG+F + G+ PAPAPR S TP + PA PG T EV R +G
Sbjct: 301 PHHPHLAARGTFT-DHGGITQPAPAPRFSATPTAVRT---GPAQPGADTAEVARDWG 353
>gi|326384845|ref|ZP_08206520.1| alpha-methylacyl-CoA racemase [Gordonia neofelifaecis NRRL B-59395]
gi|326196364|gb|EGD53563.1| alpha-methylacyl-CoA racemase [Gordonia neofelifaecis NRRL B-59395]
Length = 369
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 208/336 (61%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L GI V+EFAG+ P P M+L + GA V+R+ + G P D + G++ + NLK
Sbjct: 15 LAGIRVIEFAGIGPGPHAAMLLADLGADVLRVQRPGQLPDPNRNADALLRGRRMIEANLK 74
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ NL ++DV++E FR GVME+L GPD L NP L+Y R++G+GQDGP +
Sbjct: 75 NPADRETILNLVAKADVVIEGFRPGVMERLGFGPDDLHAVNPALVYGRMTGWGQDGPRAE 134
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+AGHD+NY+ L+G+L +G + PTPP NL DFGGG + +G++ AL ERS SG+G
Sbjct: 135 LAGHDMNYISLTGMLHAIGRPDEKPTPPLNLVGDFGGGSMFLVMGVLAALVERSVSGKGD 194
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID M +G++ LG + + T LW RG NLLD GA FY+ YET DG++MAVGA+E
Sbjct: 195 VIDAAMCDGASVLGQMMWAFRGTGLWQDRRGVNLLDTGAPFYEVYETSDGKWMAVGAIEP 254
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL GL + E LP T +L + FK KT+ EW IFD TDAC +P+L
Sbjct: 255 QFYAELLKGLELDPESLPNQLDVTKWGELKQTFTDTFKTKTRDEWAAIFDGTDACTSPIL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
++A + PH RG+ + GV+ APR +R+
Sbjct: 315 DYTEAPADPHLAARGTLV-EIDGVMQAQVAPRFARS 349
>gi|374369514|ref|ZP_09627542.1| alpha-methylacyl-CoA racemase [Cupriavidus basilensis OR16]
gi|373098969|gb|EHP40062.1| alpha-methylacyl-CoA racemase [Cupriavidus basilensis OR16]
Length = 552
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 220/370 (59%), Gaps = 16/370 (4%)
Query: 9 LEFAGLAPAPFCGMILNEFGATVIRIDK---------HGAQPFVQDTVGYGKKSLCINLK 59
+EF + P PF M+L + GA V+RID+ A D G G++S+ ++LK
Sbjct: 1 MEFEAIGPGPFGAMLLADMGADVLRIDRPVAPTDLGPKSATGKRVDVTGRGRRSVTLDLK 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + L ++DV++E FR G ME+L LGP+V NPRL+Y R++G+GQ GP +
Sbjct: 61 QPEAREAALALIERADVVIEGFRPGTMERLGLGPEVALARNPRLVYGRMTGWGQTGPMAD 120
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ LSG+LS +G P PP NL D+GGGG++ ALG+V AL + G GQ
Sbjct: 121 RAGHDLNYIALSGVLSGIGRAGEAPVPPLNLVGDYGGGGMLLALGVVAALLNVQRGGAGQ 180
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M+EG+A LG+ + + W + R NLLDGG +YD+Y T DG +MAVGA+ES
Sbjct: 181 VVDAAMIEGAAQLGAVVWGLLASGNWREERASNLLDGGTPWYDSYRTSDGHYMAVGAVES 240
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+LL LG+ ++LP+ +G R F +T+ EWC +F+ +DACV PVL
Sbjct: 241 RFYAELLEKLGLAGKDLPKQHDRSGWPVLRQHFEAAFLTRTRGEWCAVFEGSDACVAPVL 300
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
++A HP + RGSF+ AGVV P PAPR TP S + PA G H LR +
Sbjct: 301 GFAEAPHHPQHRARGSFV-EVAGVVQPGPAPRFLGTP--SVVAGPAPARGEHGGAALRDW 357
Query: 356 GYSDANIEEL 365
G+ + L
Sbjct: 358 GFDAHAVARL 367
>gi|327353190|gb|EGE82047.1| alpha-methylacyl-CoA racemase [Ajellomyces dermatitidis ATCC 18188]
Length = 423
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 209/340 (61%), Gaps = 47/340 (13%)
Query: 3 LKGITVLEFAGLAPA-------------------------PFCGMILNEFGATVIRIDK- 36
LKGI VLE AGLAPA PF G++L ++GA+V+R+D+
Sbjct: 9 LKGIRVLELAGLAPAEPKFGQLTRVPVETLENVNSNIRPAPFAGLLLADYGASVLRVDRP 68
Query: 37 ----HGAQPFV-----QDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVME 87
H + P V D++ K S+ ++LK L+V+ +L + +D++++PFR GV+E
Sbjct: 69 HPQAHSSSPDVFPPETSDSLTRHKTSISLDLKSPASLAVLLSLISNADILIDPFRPGVLE 128
Query: 88 KLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTP 146
+L L P +VL K NPRLI AR++G+ +DG Y MAGHDINY+ +SG+L LLG P
Sbjct: 129 RLGLSPTNVLLKKNPRLIVARMTGFRRDGKYKDMAGHDINYIAVSGVLGLLGRAGERPYA 188
Query: 147 PCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWD 206
P N+ DF GGG MC LGI++AL R ++G+GQV++ NMV+GSAYL ++ Q +W
Sbjct: 189 PGNIVGDFAGGGAMCFLGILLALLARERTGKGQVVEANMVDGSAYLATFPRLLQKRLVWG 248
Query: 207 KPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGR 265
PRG N+LDGG +YDTYETKD G++ AVGALE QF+A LL GLG+ ++ + R
Sbjct: 249 APRGHNVLDGGCPYYDTYETKDAGKYFAVGALEPQFFAALLKGLGLKMADIMPPDSSGMR 308
Query: 266 AK----------LTEKFKEKTQAEWCEIFDNTDACVTPVL 295
T +FKEKT+ EW +IFD TDAC TPVL
Sbjct: 309 EDPSTWAYMREVFTRRFKEKTRKEWEDIFDGTDACATPVL 348
>gi|455652247|gb|EMF30899.1| racemase [Streptomyces gancidicus BKS 13-15]
Length = 380
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 214/362 (59%), Gaps = 12/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G +D K+S+ ++L
Sbjct: 12 LTGVRVVELAGIGPGPFAAMLLGDLGADVVRVDRPGGPGLGIDPARDVTNRNKRSVVVDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + LA ++D+++E +R GV E+L +GP+ NPRL+Y R++G+GQ GP +
Sbjct: 72 KTPEGAARVLGLAERADILIEGYRPGVAERLGVGPEDCRARNPRLVYGRMTGWGQTGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ ++G L + G R P P NL D+ GG L +G++ AL +G G
Sbjct: 132 DRAGHDIGYIAVTGALGMTGEPGRPPVAPANLLGDYAGGSLYLVVGVLAALHHARATGAG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG +Y TY T DG MAVGALE
Sbjct: 192 QVVDAAVVDGTAHLTAMIHGMLAAGAWQDRRGANLLDGGCPYYGTYGTADGGHMAVGALE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+ L L ++ E +V RAK+ E+F +T+ EW +F+ +DACV PVL
Sbjct: 252 PRFYAEFLRLLDLSGLEEAHADVTRWPELRAKVAERFASRTRDEWTAVFEGSDACVAPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SL +A HPH R +F + AG+ PAPAPR S TP T + PA PG T +V R
Sbjct: 312 SLREAPHHPHLAARSTFT-DHAGITQPAPAPRFSATPATVRT---GPARPGADTEDVARD 367
Query: 355 FG 356
+G
Sbjct: 368 WG 369
>gi|33603719|ref|NP_891279.1| hypothetical protein BB4746 [Bordetella bronchiseptica RB50]
gi|412340958|ref|YP_006969713.1| hypothetical protein BN112_3676 [Bordetella bronchiseptica 253]
gi|427816730|ref|ZP_18983794.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33577844|emb|CAE35109.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408770792|emb|CCJ55590.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410567730|emb|CCN25301.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 387
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 206/339 (60%), Gaps = 11/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L+GI ++E AG+ P P M+L + GATV+RID+ +P + + +K++ +
Sbjct: 4 LQGIKIIELAGIGPCPMAAMLLADLGATVLRIDRPEPASLGIERPLKFNLLLRNRKAVAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + L +D +LE FR GV E+L LGP + NPRL+Y R++G+GQ GP
Sbjct: 64 DLKQPAARDFVLRLVEGADALLEGFRPGVTERLGLGPQDCLQRNPRLVYGRMTGWGQTGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHD+NY+GL+G+L +G + PTPP N+ DFGGG L ALG++ + E +SG
Sbjct: 124 LAQVAGHDLNYIGLTGVLHAIGRAGQPPTPPLNVVGDFGGGALYLALGVLAGIIEARQSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+G+A L + L Q LW+ RG NLLD GA+FYD YE DG +++V
Sbjct: 184 QGQVVDAAIVDGAASLATALFGLQAAGLWNSERGANLLDSGAYFYDVYECADGLWVSVAP 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE +F+ +LL + + E L + G RA L E+FK +TQA+WCE+ D CV
Sbjct: 244 LERKFHDRLLELMEIDREWLGRQADREGWPRARAILAERFKTRTQAQWCELLGTADVCVA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL L Q HPH R + + GV PAPAPR SRT
Sbjct: 304 PVLPLDQVAGHPHIREREVLV-DIDGVTQPAPAPRFSRT 341
>gi|254386833|ref|ZP_05002122.1| fatty acid-CoA racemase [Streptomyces sp. Mg1]
gi|194345667|gb|EDX26633.1| fatty acid-CoA racemase [Streptomyces sp. Mg1]
Length = 376
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 214/362 (59%), Gaps = 11/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ I+L
Sbjct: 9 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGGGLAIDPAYDVTNRNKRSVLIDL 68
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A G + L ++DV++E FR GV E+L +GP NP+L+Y R++G+GQ+GP +
Sbjct: 69 KSAGGPGRVLELVERADVLIEGFRPGVAERLGVGPADCHARNPKLVYGRMTGWGQEGPLA 128
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL-FERSKSGR 177
AGHDI Y+ ++G L ++G P P NL D+ GG L +G++ AL R+ G
Sbjct: 129 HSAGHDIAYIAVTGALGMIGNPGEPPAVPANLVGDYAGGSLYLVIGVLAALQHARTPGGA 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + + W RG NLLDGG FY TYET DG++MAVGAL
Sbjct: 189 GQVVDAAIVDGTAHLTAMIHGMVAAGGWQDRRGANLLDGGCPFYGTYETSDGQYMAVGAL 248
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E QFY + + LG+ EE + ++ R + +FK +T+A+W E+F+ TDACV PV
Sbjct: 249 EQQFYDEFVRLLGIAEEAPARKDMARWGELREAVAARFKTRTRAQWTEVFEGTDACVAPV 308
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL +A HPH RG+F + AG+ PAPAPR S TP + +T PG T V
Sbjct: 309 LSLREAPEHPHLAARGTFT-DFAGITQPAPAPRFSATP--TAVTGGPARPGADTDAVAAD 365
Query: 355 FG 356
+G
Sbjct: 366 WG 367
>gi|86748036|ref|YP_484532.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris HaA2]
gi|86571064|gb|ABD05621.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris HaA2]
Length = 371
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 209/341 (61%), Gaps = 14/341 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI ++EFAG+ P PF M+L + GA VI + + G P + G+K + ++LK
Sbjct: 21 LAGIRIVEFAGIGPGPFGAMLLADMGAEVITLTRAGQTP--RGAAARGRKIVVVDLKDKA 78
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
L + L + +D ++E +R GVME+L LGPDV+ NP+L+Y R++G+GQ GP + AG
Sbjct: 79 SLDGVLALLDNADALIEGYRPGVMERLGLGPDVVLGRNPKLVYGRMTGWGQTGPLAQAAG 138
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + P PP NL DFGGG + +G++ AL E SG+GQV+D
Sbjct: 139 HDINYISITGALAAIGPAEK-PVPPLNLVGDFGGGSMYLVVGMLAALLEAKSSGKGQVVD 197
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N+LDGGAHFY YE KDG F+++G++E QFY
Sbjct: 198 AAMCDGAASLITMFFDMTSAGRWQEGRESNMLDGGAHFYGVYECKDGHFVSIGSIEPQFY 257
Query: 243 AQLLAGLGMTEEELPQHEVETG-------RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
L G+T+ PQ++ + + KLT FK +T+ EWC++ + TD C PVL
Sbjct: 258 KLLRELAGLTD---PQYDGQMDPKNWPALKEKLTAVFKTRTRDEWCQLMEGTDVCFAPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK 336
++++AT HPH V R FI + G PAPAPR SRTP + +
Sbjct: 315 TMAEATQHPHMVAREVFITHE-GHTQPAPAPRFSRTPSSVR 354
>gi|226187495|dbj|BAH35599.1| probable alpha-methylacyl-CoA racemase [Rhodococcus erythropolis
PR4]
Length = 364
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 207/336 (61%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E AG+ P P +L + GA V+R+ + G P +D G++ ++LK
Sbjct: 10 LAGLRVVELAGIGPGPHAATLLADLGADVVRVQRAGRIPGPGQPRDQTQRGRRFCEVDLK 69
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G+ ++ L ++DV++E FR GV E+L LGPDV + NP L+Y R++G+GQ+GP S
Sbjct: 70 DPAGVDIVLGLIERADVLIEGFRPGVTERLGLGPDVALERNPALVYGRMTGWGQEGPLSQ 129
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L +G P PP N+ DFGGG + GI+ ALFER KSG+GQ
Sbjct: 130 AAGHDINYISLTGVLHAIGRAGERPVPPLNMVGDFGGGSMFLLFGILAALFERQKSGQGQ 189
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G+ L + + W RG N+LD GA +YDTYET DGR+MAVGA+E
Sbjct: 190 VVDAAMVDGTLALSHMMWSFRGLGRWSDERGVNMLDTGAPYYDTYETSDGRYMAVGAVEP 249
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA LLAGLG+ LP ++ + + F KT+ EW IFD TDAC TPVL
Sbjct: 250 QFYALLLAGLGLDPATLPSQNDKSAWPQTKKVFADVFASKTRDEWAAIFDGTDACTTPVL 309
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A+S+PH RGS + GV PAPR SR+
Sbjct: 310 AFAEASSNPHVAQRGSLV-ELDGVTQHRPAPRFSRS 344
>gi|91777759|ref|YP_552967.1| alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
gi|91690419|gb|ABE33617.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
Length = 364
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/346 (43%), Positives = 210/346 (60%), Gaps = 6/346 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EF+ L P PFC M+L + GA +++I + G + D + G++ + ++LK
Sbjct: 6 LSGVRVIEFSALGPVPFCTMLLADMGADIVQIARPGMRTDADDFMQRGRRIVPLDLKVPA 65
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
L +D++LE R GVMEKL LGPDV NPRL++ R++G+GQ GP ++ AG
Sbjct: 66 DRDTALELVGHADIVLEGSRPGVMEKLGLGPDVCLARNPRLVFGRMTGWGQTGPLAATAG 125
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L +G + P P NL D+GGG + A G + AL+E SG+GQVID
Sbjct: 126 HDINYIALAGALDAIGPAHGAPVAPLNLIGDYGGGAMFLAFGALCALWEARNSGQGQVID 185
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G+A L S L + + W RG NLLDGGA +Y TY T D R++AVGA+E F+
Sbjct: 186 AAMVDGTATLMSLLCKLRGLGQWHDSRGTNLLDGGAPWYGTYRTLDDRYVAVGAIEEPFW 245
Query: 243 AQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
LL L ++ + LP RA L E F +T+ W F N+DACV+PVLSL
Sbjct: 246 QLLLTQLDISSDSLPPRSDRARWPVIRAALAECFSSRTRDAWAAHFRNSDACVSPVLSLD 305
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGT-SKITEHNPA 343
+A H H R S+ + +G++ PAPAPRLSRTP +KI+E + A
Sbjct: 306 EAARHEHMAARRSYRID-SGMLRPAPAPRLSRTPAVPAKISEVSSA 350
>gi|56478647|ref|YP_160236.1| acyl-CoA transferase [Aromatoleum aromaticum EbN1]
gi|56314690|emb|CAI09335.1| Acyl-CoA transferase, family III [Aromatoleum aromaticum EbN1]
Length = 364
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 215/363 (59%), Gaps = 18/363 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQ--DTVGYGKKSLCIN 57
L G+ V+EF G+ P+PFCGM+L + GA V+RID+ GA P + D + GK L ++
Sbjct: 8 LAGVRVVEFGGIGPSPFCGMLLRQMGAEVLRIDRGAYAGALPIPERFDFLNKGKTRLRMD 67
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + L + + + +DV++E FR GVME+L LGP+V NPRL+Y R++G+G++GP
Sbjct: 68 LKTPEALEQVLAIIDAADVLIEGFRPGVMERLGLGPEVCLARNPRLVYGRVTGWGREGPL 127
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI Y+ L+G LS +G P PP NL DF GG L A G+ AL +GR
Sbjct: 128 ADEAGHDITYISLTGALSCIGPAGAGPVPPLNLVGDFAGGALYLAFGVAAALASMRSTGR 187
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+G+A+L +++ + +W+ RG N DGG+ FY Y T DGR++AV A
Sbjct: 188 GQVVDAAMVDGAAHLMTFIYGLRQAGIWNLDRGSNPADGGSPFYGVYATSDGRWLAVAAA 247
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E +F +AGLG+ + E R+ + E +++ EWCE+ DACV P
Sbjct: 248 EMKFRRAFVAGLGLESGLADEAEDRAAWPRLRSLVAEAIARRSRDEWCELLAGRDACVAP 307
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VL L +A HPH V RG F+ GV+ PAPAPR S GT+ P P +++L+
Sbjct: 308 VLDLDEAPDHPHAVARGVFVAEE-GVIQPAPAPRFSE--GTA------PPPLCDAQQLLK 358
Query: 354 HFG 356
+G
Sbjct: 359 SWG 361
>gi|378728684|gb|EHY55143.1| alpha-methylacyl-CoA racemase [Exophiala dermatitidis NIH/UT8656]
Length = 389
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/319 (47%), Positives = 208/319 (65%), Gaps = 13/319 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKA 61
L G+ VLE AGLAP PFCG++L ++GA+V+RID+ P D + K S+ ++LK
Sbjct: 12 LTGLRVLELAGLAPGPFCGLLLADWGASVLRIDRPSPIPTPTNDLLTSRKASIALDLKSP 71
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSM 120
S+ +L +Q+DV+++PFR GV+EKL L P VL K NPRLI RL+G+ +DG YS+M
Sbjct: 72 DSKSLFLSLISQADVLIDPFRPGVLEKLGLDPTAVLLKRNPRLIVVRLTGFRRDGKYSAM 131
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL SGILS+LG R++ P PP N+ ADF GGG + G+++AL +R SG+GQV
Sbjct: 132 AGHDINYLAASGILSMLGPRDQPPFPPANILADFAGGGHVAFTGVLLALIQRQTSGKGQV 191
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALES 239
+ NMV+G +YLG++ +W PRG N LDGG +Y YE KD G++++VGALE
Sbjct: 192 VSANMVDGVSYLGTFPRLLTKEAMWSGPRGTNTLDGGCPYYGCYECKDAGKYVSVGALEP 251
Query: 240 QFYAQLLAGLGMTEEELPQHE---VETGRA------KLTEKFKEKTQAEWCEIFDNTDAC 290
QF+ LL GL + E+ HE E RA T++FK KT+ EW IFD TDAC
Sbjct: 252 QFFEVLLKGLELKTHEVVPHEGLDREDKRAWPYMREVFTQRFKTKTRKEWENIFDGTDAC 311
Query: 291 VTPVLSLSQATSHPHNVHR 309
V PVL ++ + ++ HR
Sbjct: 312 VVPVLEHAEMEASGYD-HR 329
>gi|410422193|ref|YP_006902642.1| hypothetical protein BN115_4423 [Bordetella bronchiseptica MO149]
gi|427820204|ref|ZP_18987267.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427822799|ref|ZP_18989861.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|408449488|emb|CCJ61179.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410571204|emb|CCN19424.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410588064|emb|CCN03118.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 387
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 206/339 (60%), Gaps = 11/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L+G+ ++E AG+ P P M+L + GATV+RID+ +P + + +K++ +
Sbjct: 4 LQGVKIIELAGIGPCPMAAMLLADLGATVLRIDRPEPASLGIERPLKFNLLLRNRKAVAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + L +D +LE FR GV E+L LGP + NPRL+Y R++G+GQ GP
Sbjct: 64 DLKQPAARDFVLRLVEGADALLEGFRPGVTERLGLGPQDCLQRNPRLVYGRMTGWGQTGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHD+NY+GL+G+L +G + PTPP N+ DFGGG L ALG++ + E +SG
Sbjct: 124 LAQVAGHDLNYIGLTGVLHAIGRAGQPPTPPLNVVGDFGGGALYLALGVLAGIIEARQSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+G+A L + L Q LW+ RG NLLD GA+FYD YE DG +++V
Sbjct: 184 QGQVVDAAIVDGAASLATALFGLQAAGLWNSERGANLLDSGAYFYDVYECADGLWVSVAP 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE +F+ +LL + + E L + G RA L E+FK +TQA+WCE+ D CV
Sbjct: 244 LERKFHDKLLELMEIDREWLGRQADREGWPRARAILAERFKTRTQAQWCELLGTADVCVA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL L Q HPH R + + GV PAPAPR SRT
Sbjct: 304 PVLPLDQVAGHPHIREREVLV-DIDGVTQPAPAPRFSRT 341
>gi|15607995|ref|NP_215370.1| Probable fatty-acid-CoA racemase Far [Mycobacterium tuberculosis
H37Rv]
gi|15840268|ref|NP_335305.1| fatty acid-CoA racemase [Mycobacterium tuberculosis CDC1551]
gi|31792043|ref|NP_854536.1| fatty-acid-CoA racemase [Mycobacterium bovis AF2122/97]
gi|121636778|ref|YP_977001.1| fatty-acid-CoA racemase far [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660632|ref|YP_001282155.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis H37Ra]
gi|148822063|ref|YP_001286817.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis F11]
gi|167966979|ref|ZP_02549256.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis H37Ra]
gi|224989249|ref|YP_002643936.1| fatty-acid-CoA racemase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800123|ref|YP_003033124.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis KZN 1435]
gi|254231164|ref|ZP_04924491.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis C]
gi|254363790|ref|ZP_04979836.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis str.
Haarlem]
gi|254549831|ref|ZP_05140278.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289442264|ref|ZP_06432008.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis T46]
gi|289446420|ref|ZP_06436164.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis CPHL_A]
gi|289568817|ref|ZP_06449044.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis T17]
gi|289573477|ref|ZP_06453704.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis K85]
gi|289744581|ref|ZP_06503959.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis 02_1987]
gi|289749374|ref|ZP_06508752.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis T92]
gi|289752909|ref|ZP_06512287.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis EAS054]
gi|289760987|ref|ZP_06520365.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis GM 1503]
gi|297633372|ref|ZP_06951152.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis KZN 4207]
gi|297730357|ref|ZP_06959475.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis KZN R506]
gi|298524348|ref|ZP_07011757.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306774979|ref|ZP_07413316.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu001]
gi|306782107|ref|ZP_07420444.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu002]
gi|306783523|ref|ZP_07421845.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu003]
gi|306787887|ref|ZP_07426209.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu004]
gi|306792228|ref|ZP_07430530.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu005]
gi|306802513|ref|ZP_07439181.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu008]
gi|306806695|ref|ZP_07443363.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu007]
gi|306966891|ref|ZP_07479552.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu009]
gi|306971086|ref|ZP_07483747.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu010]
gi|307078814|ref|ZP_07487984.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu011]
gi|307083373|ref|ZP_07492486.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu012]
gi|313657683|ref|ZP_07814563.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis KZN V2475]
gi|339630920|ref|YP_004722562.1| fatty-acid-CoA racemase [Mycobacterium africanum GM041182]
gi|375297356|ref|YP_005101623.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis KZN 4207]
gi|378770612|ref|YP_005170345.1| putative fatty-acid-CoA racemase [Mycobacterium bovis BCG str.
Mexico]
gi|383306754|ref|YP_005359565.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis RGTB327]
gi|385997636|ref|YP_005915934.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis CTRI-2]
gi|386003874|ref|YP_005922153.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis RGTB423]
gi|392385565|ref|YP_005307194.1| far [Mycobacterium tuberculosis UT205]
gi|392433562|ref|YP_006474606.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis KZN 605]
gi|397672671|ref|YP_006514206.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis H37Rv]
gi|422811805|ref|ZP_16860199.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis CDC1551A]
gi|424946608|ref|ZP_18362304.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis NCGM2209]
gi|449062888|ref|YP_007429971.1| fatty-acid-CoA racemase [Mycobacterium bovis BCG str. Korea 1168P]
gi|122920269|pdb|2G04|A Chain A, Crystal Structure Of Fatty Acid-Coa Racemase From
Mycobacterium Tuberculosis H37rv
gi|122920270|pdb|2G04|B Chain B, Crystal Structure Of Fatty Acid-Coa Racemase From
Mycobacterium Tuberculosis H37rv
gi|122920271|pdb|2G04|C Chain C, Crystal Structure Of Fatty Acid-Coa Racemase From
Mycobacterium Tuberculosis H37rv
gi|122920272|pdb|2G04|D Chain D, Crystal Structure Of Fatty Acid-Coa Racemase From
Mycobacterium Tuberculosis H37rv
gi|122920273|pdb|2G04|E Chain E, Crystal Structure Of Fatty Acid-Coa Racemase From
Mycobacterium Tuberculosis H37rv
gi|122920274|pdb|2G04|F Chain F, Crystal Structure Of Fatty Acid-Coa Racemase From
Mycobacterium Tuberculosis H37rv
gi|13880428|gb|AAK45119.1| fatty acid-CoA racemase [Mycobacterium tuberculosis CDC1551]
gi|31617630|emb|CAD93740.1| PROBABLE FATTY-ACID-COA RACEMASE FAR [Mycobacterium bovis
AF2122/97]
gi|121492425|emb|CAL70893.1| Probable fatty-acid-CoA racemase far [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600223|gb|EAY59233.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis C]
gi|134149304|gb|EBA41349.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis str.
Haarlem]
gi|148504784|gb|ABQ72593.1| fatty-acid-CoA racemase Far [Mycobacterium tuberculosis H37Ra]
gi|148720590|gb|ABR05215.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis F11]
gi|224772362|dbj|BAH25168.1| putative fatty-acid-CoA racemase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253321626|gb|ACT26229.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis KZN 1435]
gi|289415183|gb|EFD12423.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis T46]
gi|289419378|gb|EFD16579.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis CPHL_A]
gi|289537908|gb|EFD42486.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis K85]
gi|289542571|gb|EFD46219.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis T17]
gi|289685109|gb|EFD52597.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis 02_1987]
gi|289689961|gb|EFD57390.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis T92]
gi|289693496|gb|EFD60925.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis EAS054]
gi|289708493|gb|EFD72509.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis GM 1503]
gi|298494142|gb|EFI29436.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308216475|gb|EFO75874.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu001]
gi|308325187|gb|EFP14038.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu002]
gi|308331685|gb|EFP20536.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu003]
gi|308335485|gb|EFP24336.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu004]
gi|308339283|gb|EFP28134.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu005]
gi|308346844|gb|EFP35695.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu007]
gi|308350760|gb|EFP39611.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu008]
gi|308355421|gb|EFP44272.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu009]
gi|308359374|gb|EFP48225.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu010]
gi|308363282|gb|EFP52133.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu011]
gi|308366950|gb|EFP55801.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu012]
gi|323720718|gb|EGB29794.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis CDC1551A]
gi|328459861|gb|AEB05284.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis KZN 4207]
gi|339330276|emb|CCC25936.1| putative fatty-acid-CoA racemase FAR [Mycobacterium africanum
GM041182]
gi|341600794|emb|CCC63465.1| probable fatty-acid-CoA racemase far [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344218682|gb|AEM99312.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis CTRI-2]
gi|356592933|gb|AET18162.1| Putative fatty-acid-CoA racemase [Mycobacterium bovis BCG str.
Mexico]
gi|358231123|dbj|GAA44615.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis NCGM2209]
gi|378544116|emb|CCE36389.1| far [Mycobacterium tuberculosis UT205]
gi|380720707|gb|AFE15816.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis RGTB327]
gi|380724362|gb|AFE12157.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis RGTB423]
gi|392054971|gb|AFM50529.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis KZN 605]
gi|395137576|gb|AFN48735.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis H37Rv]
gi|440580320|emb|CCG10723.1| putative FATTY-ACID-CoA RACEMASE FAR [Mycobacterium tuberculosis
7199-99]
gi|444894349|emb|CCP43603.1| Probable fatty-acid-CoA racemase Far [Mycobacterium tuberculosis
H37Rv]
gi|449031396|gb|AGE66823.1| fatty-acid-CoA racemase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 359
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 209/337 (62%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVKVIELGGIGPGPHAGMVLADLGADVVRVRRPGGLTMPSEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
M LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +S
Sbjct: 67 TQP--QAMLELAAKADVLLDCFRPGTCERLGIGPDDCASVNPRLIFARITGWGQDGPLAS 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G L+ G+ +R P PP NL ADFGGG ++ LGIV+AL+ER +SG GQ
Sbjct: 125 TAGHDINYLSQTGALAAFGYADRPPMPPLNLVADFGGGSMLVLLGIVVALYERERSGVGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G + L + + R LLDGGA FY YET DG++MAVGA+E
Sbjct: 185 VVDAAMVDGVSVLAQMMWTMKGIGSLRDQRESFLLDGGAPFYRCYETSDGKYMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LL+GLG++ ++P G ++ E+F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLSGLGLSAADVPTQLDVAGYPQMYDIFAERFASRTRDEWTRVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ S+A ++ H R + I GV APAPR SRTP
Sbjct: 305 AWSEAANNDHLKARSTVI-TAHGVQQAAPAPRFSRTP 340
>gi|289756941|ref|ZP_06516319.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis T85]
gi|385990317|ref|YP_005908615.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis CCDC5180]
gi|385993915|ref|YP_005912213.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis CCDC5079]
gi|424805649|ref|ZP_18231080.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis W-148]
gi|289712505|gb|EFD76517.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis T85]
gi|326904925|gb|EGE51858.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis W-148]
gi|339293869|gb|AEJ45980.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis CCDC5079]
gi|339297510|gb|AEJ49620.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis CCDC5180]
Length = 359
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 209/337 (62%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVKVIELGGIGPGPHVGMVLADLGADVVRVRRPGGLTMPSEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
M LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +S
Sbjct: 67 TQP--QAMLELAAKADVLLDCFRPGTCERLGIGPDDCASVNPRLIFARITGWGQDGPLAS 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G L+ G+ +R P PP NL ADFGGG ++ LGIV+AL+ER +SG GQ
Sbjct: 125 TAGHDINYLSQTGALAAFGYADRPPMPPLNLVADFGGGSMLVLLGIVVALYERERSGVGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G + L + + R LLDGGA FY YET DG++MAVGA+E
Sbjct: 185 VVDAAMVDGVSVLAQMMWTMKGIGSLRDQRESFLLDGGAPFYRCYETSDGKYMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LL+GLG++ ++P G ++ E+F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLSGLGLSAADVPTQLDVAGYPQMYDIFAERFASRTRDEWTRVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ S+A ++ H R + I GV APAPR SRTP
Sbjct: 305 AWSEAANNDHLKARSTVI-TAHGVQQAAPAPRFSRTP 340
>gi|429205756|ref|ZP_19197026.1| Alpha-methylacyl-CoA racemase [Rhodobacter sp. AKP1]
gi|428191274|gb|EKX59816.1| Alpha-methylacyl-CoA racemase [Rhodobacter sp. AKP1]
Length = 393
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/364 (42%), Positives = 213/364 (58%), Gaps = 14/364 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQ---DTVGYGKKSLCI 56
L G+ ++E GL P PF M+L++ GA VIR+ A+ P + D + G++S+ I
Sbjct: 19 LAGLRIVEMVGLGPCPFAAMMLSDAGAEVIRVHPLAARAEIPLMDTEFDVLARGRRSIAI 78
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ +G++++ +LA ++D ++E FR GVME+L LGP NPRL+Y R++G+GQDGP
Sbjct: 79 DLKRPEGVALLLDLAERADGLMEGFRPGVMERLGLGPAECHARNPRLVYGRMTGWGQDGP 138
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHD+ Y+ LSG+L LG +R P P NL DFGGGG+M A G+V AL + +G
Sbjct: 139 LAATAGHDLTYIALSGVLGALGPADRPPAVPLNLIGDFGGGGMMLAFGMVAALLQARATG 198
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D M EG++ L + + + W R NLLDGGA FY TYE DGRF+AV
Sbjct: 199 RGQVVDAAMTEGASLLAAMIWGFRSGGAWQDGRQANLLDGGAWFYGTYECADGRFLAVAP 258
Query: 237 LESQFYAQLLAGLGMTEEEL---PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+E F L LG EL P + R +L + K + EW +F TDACV P
Sbjct: 259 IEGGFARTFLERLGPEAAELRQGPPADWPAQRTRLAGILRTKPRDEWVALFAGTDACVAP 318
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVL 352
VL S+A HP R SF+ GV PAPAPR S G + PA PG T E+L
Sbjct: 319 VLDWSEAPEHPQARARESFV-TVGGVPQPAPAPRFS---GFAGPRPSPPARPGADTAEIL 374
Query: 353 RHFG 356
+G
Sbjct: 375 ARWG 378
>gi|340625869|ref|YP_004744321.1| putative fatty-acid-CoA racemase FAR [Mycobacterium canettii CIPT
140010059]
gi|433625939|ref|YP_007259568.1| Putative fatty-acid-CoA racemase Far [Mycobacterium canettii CIPT
140060008]
gi|340004059|emb|CCC43195.1| putative fatty-acid-CoA racemase FAR [Mycobacterium canettii CIPT
140010059]
gi|432153545|emb|CCK50768.1| Putative fatty-acid-CoA racemase Far [Mycobacterium canettii CIPT
140060008]
Length = 359
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 209/337 (62%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVKVIELGGIGPGPHAGMVLADLGADVVRVRRPGGLTMPSEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
M LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +S
Sbjct: 67 TQP--QAMLELAAKADVLLDCFRPGTCERLGIGPDDCASVNPRLIFARITGWGQDGPLAS 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G L+ G+ +R P PP NL ADFGGG ++ LGIV+AL+ER +SG GQ
Sbjct: 125 TAGHDINYLSQTGALAAFGYADRPPMPPLNLVADFGGGSMLVLLGIVVALYERERSGVGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G + L + + R LLDGGA FY YET DG++MAVGA+E
Sbjct: 185 VVDAAMVDGVSVLAQMMWTMKGIGSLRDQRESFLLDGGAPFYRCYETSDGKYMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LL+GLG++ ++P G ++ E+F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLSGLGLSAADVPTQLDVAGYPQMYDIFAERFASRTRDEWTRVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ S+A ++ H R + I GV APAPR SRTP
Sbjct: 305 AWSEAANNDHLKARSTVI-TAHGVQQAAPAPRFSRTP 340
>gi|424854001|ref|ZP_18278359.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
gi|356664048|gb|EHI44141.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
Length = 380
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/381 (45%), Positives = 236/381 (61%), Gaps = 17/381 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-------AQPFVQDTVGYGKKSLC 55
L G+TV+E A LAPAPF MIL + GA VIR+++ G A V D G++S+
Sbjct: 6 LSGLTVVEIASLAPAPFGCMILADLGADVIRVERAGDGGSGLMAPSGVLDR---GRRSIA 62
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+NL+ +GL + L +DV++E FR GV E+L +GPD NP LIY R++G+GQDG
Sbjct: 63 VNLRTPEGLGAVLALVEGADVLVEGFRPGVAERLGIGPDDCLSRNPGLIYGRMTGWGQDG 122
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ L+G L +G P PP NL DFGGGGLM +GI+ AL ERS+S
Sbjct: 123 PLAPRAGHDINYIALAGALEPIGRAGERPVPPLNLLGDFGGGGLMLTMGILAALHERSRS 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQV+D +MV+G+A L +++ LW + RG+N+LDG A FYDTYE DG +AVG
Sbjct: 183 GRGQVVDASMVDGAALLTAFVHGMNAAGLWQEGRGQNVLDGAAAFYDTYECADGLHVAVG 242
Query: 236 ALESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E FY +LL LG++ E+LP Q++++ + +L E F + + EW +F ++DACV
Sbjct: 243 CVEPHFYGELLDVLGLSGEDLPSQYDLDAAPELKRRLAEVFATRPRDEWAALFADSDACV 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
+PVLS +A HPHN R +F+ G+ PAPAPR SRT + + P PG T +
Sbjct: 303 SPVLSPWEAHEHPHNKERETFV-QVGGIRQPAPAPRFSRT--PAPVPRPAPRPGQDTDAI 359
Query: 352 LRHFGYSDANIEELIREDVIE 372
L GY A IE L +E
Sbjct: 360 LAQAGYDAAGIEHLRSAGAVE 380
>gi|21464292|gb|AAM51949.1| GH11368p [Drosophila melanogaster]
Length = 290
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/251 (55%), Positives = 175/251 (69%), Gaps = 5/251 (1%)
Query: 86 MEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPT 145
MEKL LGP LC +NPRLIYARL+G+GQ G + AGHDINY LSG+LS+LG R+ T
Sbjct: 1 MEKLNLGPTDLCTANPRLIYARLTGFGQHGRLAQRAGHDINYAALSGVLSMLGRRHEKVT 60
Query: 146 PPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLW 205
P N+ ADF GG LMCALGI +AL ER +SG+GQV+D +MVEG+AY+ SWL +++ +W
Sbjct: 61 APINILADFAGGSLMCALGICLALLERHRSGKGQVVDASMVEGAAYVASWLFMSRNLVIW 120
Query: 206 DKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL---PQHEVE 262
+ RG+NL+DGG+ FYDTYETKDGR+M+VGALE QF+ L L + E+ +H+V
Sbjct: 121 GRERGDNLVDGGSFFYDTYETKDGRYMSVGALEPQFFEMLKQRLELPEDVSQFGEEHQVR 180
Query: 263 TGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAP 322
GR LTE F KTQAEW +IF++ DACV PVL + H HN+ R SF P
Sbjct: 181 -GRKLLTEAFLSKTQAEWSQIFEDVDACVYPVLDYREVHRHDHNIQRNSFEVTE-DTATP 238
Query: 323 APAPRLSRTPG 333
PAP LSRTPG
Sbjct: 239 RPAPVLSRTPG 249
>gi|365868765|ref|ZP_09408314.1| fatty-acid-CoA racemase Far [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|420880427|ref|ZP_15343794.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0304]
gi|420887568|ref|ZP_15350924.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0422]
gi|420892924|ref|ZP_15356267.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0708]
gi|420900683|ref|ZP_15364014.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0817]
gi|420903204|ref|ZP_15366527.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-1212]
gi|420970429|ref|ZP_15433629.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0921]
gi|363999695|gb|EHM20897.1| fatty-acid-CoA racemase Far [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|392085336|gb|EIU11161.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0304]
gi|392093175|gb|EIU18973.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0422]
gi|392098044|gb|EIU23838.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0817]
gi|392106688|gb|EIU32472.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0708]
gi|392109749|gb|EIU35522.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-1212]
gi|392174858|gb|EIV00523.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0921]
Length = 350
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 211/334 (63%), Gaps = 10/334 (2%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKAKGL 64
+ V+E G+ P P M+L++ GA VIR+ + G ++T + + +NL K
Sbjct: 1 MKVIELGGIGPGPHAAMMLSDLGADVIRVRRPGGLAIPAEETDLFHRGKRLVNLDVKKDP 60
Query: 65 SVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHD 124
+ L +++DV+L+PFR GV E++ +GP+ K NPRLI+AR++G+GQ GP + AGHD
Sbjct: 61 EALLALVDKADVLLDPFRPGVCERIGIGPEECAKRNPRLIFARMTGWGQHGPMADRAGHD 120
Query: 125 INYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCN 184
INYL L+G L +G+++R P PP NL ADFGGG ++ GI+ AL+ER KSG+GQVID
Sbjct: 121 INYLSLTGALGSMGYKDRPPMPPMNLVADFGGGSMLLVQGILAALYEREKSGKGQVIDGA 180
Query: 185 MVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + L W T + L+D+ R LLDGG+ FY TYET DG++MAVG++E QF+
Sbjct: 181 MVDGVSQLAQMQW-TMYNNGLLFDE-REAGLLDGGSPFYGTYETSDGKYMAVGSIEPQFF 238
Query: 243 AQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L+ GLG+ E +P + R + FK KT+ EW EIF TDACV+PVL+
Sbjct: 239 AILVQGLGLDPESVPFQLDKARYPEMRKMFDDAFKTKTRDEWTEIFIGTDACVSPVLTWG 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A + H RG+ + + GV APAPR SRTP
Sbjct: 299 EAKQNEHLRDRGTIV-DVDGVTQAAPAPRFSRTP 331
>gi|330824079|ref|YP_004387382.1| alpha-methylacyl-CoA racemase [Alicycliphilus denitrificans K601]
gi|329309451|gb|AEB83866.1| Alpha-methylacyl-CoA racemase [Alicycliphilus denitrificans K601]
Length = 386
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 204/340 (60%), Gaps = 12/340 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L GI V+E AG+ P P M L + GATVIR+D+ GA VQ +G ++S+ +
Sbjct: 9 LAGIKVVEIAGIGPGPLAAMFLADLGATVIRVDRKEPSGLGAPRPVQFDLGLRNRRSIRV 68
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ L Q+D ++E FR GVME+L LGPD K+NPRL+Y R++G+GQDGP
Sbjct: 69 DLKDPAAVELVMELVGQADALIEGFRPGVMERLSLGPDACLKANPRLVYGRVTGWGQDGP 128
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S +AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 129 LSQVAGHDLNYISITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARTSG 188
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A + + + K RG NLLD GAHFY+ YE DGR ++V
Sbjct: 189 QGQVVDAAMVDGVASIMTVTMGLHAAGMMGKERGTNLLDTGAHFYEVYECADGRHLSVAP 248
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVET-----GRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E +FY LL LG+ + L Q +++ + L +FKE+T+ EW + + DACV
Sbjct: 249 IEGKFYRLLLEKLGLQDHPLLQQQMDKACWPEAKQVLAARFKERTRDEWTALLGHLDACV 308
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL +A HPH RG+ AGVV PAP PR SRT
Sbjct: 309 APVLDFDEAPRHPHVKARGTLT-EVAGVVQPAPGPRFSRT 347
>gi|420913502|ref|ZP_15376814.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0125-R]
gi|420914709|ref|ZP_15378015.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0125-S]
gi|420986011|ref|ZP_15449174.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0206]
gi|421016186|ref|ZP_15479255.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0122-S]
gi|421021720|ref|ZP_15484771.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0731]
gi|421037772|ref|ZP_15500783.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0116-R]
gi|392115496|gb|EIU41265.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0125-R]
gi|392124783|gb|EIU50542.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0125-S]
gi|392188815|gb|EIV14450.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0206]
gi|392216808|gb|EIV42347.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0122-S]
gi|392217290|gb|EIV42828.1| fatty-acid-CoA racemase [Mycobacterium abscessus 3A-0731]
gi|392225986|gb|EIV51500.1| fatty-acid-CoA racemase [Mycobacterium abscessus 4S-0116-R]
Length = 350
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 211/334 (63%), Gaps = 10/334 (2%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKAKGL 64
+ V+E G+ P P M+L++ GA VIR+ + G ++T + + +NL K
Sbjct: 1 MKVIELGGIGPGPHAAMMLSDLGADVIRVRRPGGLAIPAEETDLFHRGKRLVNLDVKKDP 60
Query: 65 SVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHD 124
+ L +++DV+L+PFR GV E++ +GP+ K NPRLI+AR++G+GQ GP + AGHD
Sbjct: 61 EALLALVDKADVLLDPFRPGVCERIGIGPEECAKRNPRLIFARMTGWGQHGPMADRAGHD 120
Query: 125 INYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCN 184
INYL L+G L +G+++R P PP NL ADFGGG ++ GI+ AL+ER KSG+GQVID
Sbjct: 121 INYLSLTGALGSMGYKDRPPMPPMNLVADFGGGSMLLVQGILAALYEREKSGKGQVIDGA 180
Query: 185 MVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + L W T + L+D+ R LLDGG+ FY TYET DG++MAVG++E QF+
Sbjct: 181 MVDGVSQLAQMQW-TMYNNGLLFDE-REAGLLDGGSPFYGTYETSDGKYMAVGSIEPQFF 238
Query: 243 AQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L+ GLG+ E +P + R + FK KT+ EW EIF TDACV+PVL+
Sbjct: 239 AILVQGLGLDPESVPFQLDKARYPEMRKMFDDAFKTKTRDEWTEIFIGTDACVSPVLTWG 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A + H RG+ + + GV APAPR SRTP
Sbjct: 299 EAKQNEHLRDRGTIV-DVDGVTQAAPAPRFSRTP 331
>gi|226364078|ref|YP_002781860.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
gi|226242567|dbj|BAH52915.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
Length = 357
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 205/337 (60%), Gaps = 12/337 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRI---DKHGAQPFVQDTVGYGKKSLCINLK 59
L GI VLE AGL PAP ++L + GA V+R+ D AQ D G++ + NLK
Sbjct: 9 LAGIRVLELAGLGPAPHAALMLADLGADVVRVQRPDPSSAQ--APDPTLRGRRIVTANLK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
L ++ LA ++D+++E FR GV E+L LGPD NP LIY R++G+GQDGP+++
Sbjct: 67 DPDDLDDVRALALKADILIEGFRPGVAERLGLGPDTFANVNPGLIYGRMTGWGQDGPWAA 126
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
GHDIN++ +G+L+ +G P PP NL DFGGG + G++ AL ER++SGRGQ
Sbjct: 127 KPGHDINFIAATGVLNAIGPAEGAPLPPLNLIGDFGGGSMFLIAGLLAALVERTRSGRGQ 186
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M++G+ L + + W RG N+LDGGA +YD Y T DG +MAVGA+E
Sbjct: 187 VVDAAMLDGTLTLAHSVWAMRAAGDWTDERGANVLDGGAPYYDCYRTADGGYMAVGAIEP 246
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVL 295
QFY LL GL + EE P + + +L E F +++AEW +FD+ DACVTPVL
Sbjct: 247 QFYQALLDGLAI--EEAPDRDDRSRWPELRELFATTFATRSRAEWETVFDSIDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
S + + P HR + P R GV+ P APRLSRTP
Sbjct: 305 SFDEVSGQPQVAHRQAIGP-RDGVLQPGAAPRLSRTP 340
>gi|126464655|ref|YP_001045768.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides ATCC 17029]
gi|126106466|gb|ABN78996.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides ATCC 17029]
Length = 393
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 213/364 (58%), Gaps = 14/364 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQ---DTVGYGKKSLCI 56
L G+ ++E GL P PF M+L++ GA VIR+ A+ P + D + G++S+ I
Sbjct: 19 LAGLRIVEMVGLGPCPFAAMMLSDAGAEVIRVHPLAARAEIPLMDTEFDVLARGRRSIAI 78
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ +G++++ +LA ++D ++E FR GVME+L LGP NPR +Y R++G+GQDGP
Sbjct: 79 DLKRPEGVALLLDLAERADGLMERFRPGVMERLGLGPAECHARNPRFVYGRMTGWGQDGP 138
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHD+ Y+ LSG+L LG +R P P NL DFGGGG+M A G+V AL + +G
Sbjct: 139 LAATAGHDLTYIALSGVLGALGPADRPPAVPLNLIGDFGGGGMMLAFGMVAALLQARTTG 198
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D M EG++ L + + + W R NLLDGGA FY TYE DGRF+AV
Sbjct: 199 RGQVVDAAMTEGASLLAAMIWGFRAGGAWQDGRQANLLDGGAWFYGTYECADGRFLAVAP 258
Query: 237 LESQFYAQLLAGLGMTEEEL---PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+E +F L LG EL P + RA+L + K + W +F TDACV P
Sbjct: 259 IEGRFARTFLERLGPEAAELRQGPPADWPAQRARLAVILRTKPRDAWVALFAGTDACVAP 318
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVL 352
VL S+A HP R SF+ GV PAPAPR S G + PA PG T E+L
Sbjct: 319 VLDWSEAPEHPQARARESFV-TVGGVTQPAPAPRFS---GFAGPRPSPPARPGADTAEIL 374
Query: 353 RHFG 356
+G
Sbjct: 375 ARWG 378
>gi|392942511|ref|ZP_10308153.1| putative acyl-CoA transferase/carnitine dehydratase [Frankia sp.
QA3]
gi|392285805|gb|EIV91829.1| putative acyl-CoA transferase/carnitine dehydratase [Frankia sp.
QA3]
Length = 368
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 205/358 (57%), Gaps = 12/358 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTVGYGKKSLCINLK 59
L GI V+E AG+ P P M+L + GA V+R+ + GA P + V G++ + +L
Sbjct: 11 LAGIRVVELAGIGPGPHAAMMLGDLGADVVRVARPGAVPAPGVPAEPVQRGRRLVEADLG 70
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ +L +DV++E FR GV E+L LGPD + NPRL+Y R++G+GQ GP +
Sbjct: 71 DPAARDGVLDLIASADVLIEGFRPGVTERLGLGPDDCARRNPRLVYGRMTGWGQHGPLAD 130
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
GHDINYL ++G+L +G P P NL DFGGG +GI+ AL ER +SGRGQ
Sbjct: 131 RVGHDINYLSITGVLHAIGRAGEPPVAPLNLVGDFGGGSTYLVMGILAALVERERSGRGQ 190
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID +V+G++ L + + W+ RG N LD GA FYD Y T DGR+MAVGALE
Sbjct: 191 VIDAAIVDGASLLAHMVWGLRGRGRWNDERGSNRLDTGAPFYDVYATADGRYMAVGALEP 250
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA + GLG+ LP + R T+ F +T+ EW +FD DACVTPVL
Sbjct: 251 RFYATFVTGLGLDPAALPGQDDRARWPELREAFTKAFAGRTRDEWAAVFDPLDACVTPVL 310
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVL 352
+A +HPH R + + AGV PAPAPR SR+ P ++ P V EVL
Sbjct: 311 DFDEAAAHPHMAAREILV-DVAGVTQPAPAPRFSRSVPAAPRVP---PRTAVTVAEVL 364
>gi|432343684|ref|ZP_19592830.1| alpha-methylacyl-CoA racemase [Rhodococcus wratislaviensis IFP
2016]
gi|430771286|gb|ELB87168.1| alpha-methylacyl-CoA racemase [Rhodococcus wratislaviensis IFP
2016]
Length = 365
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 203/337 (60%), Gaps = 8/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L GI VLE AG+ P P M+L + GA V+R+ + G P T G+ + +LK
Sbjct: 11 LAGIRVLELAGMGPGPHAAMLLADLGADVVRVQRAGGLPAPDRTASQQLRGRTIVEADLK 70
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + ++++ L +++DV++E FR GV E++ LGPD NPRLIY R++G+GQ GP +
Sbjct: 71 RPEDIAMVLGLLDRADVLVEGFRPGVTERMGLGPDEALTRNPRLIYGRVTGWGQSGPRAL 130
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ ++G+L +G ++ P PP NL DFGGG + +G++ AL ER SGRGQ
Sbjct: 131 QAGHDLNYISVTGLLHAVGRKDERPVPPLNLFGDFGGGSMFLVVGVLAALVERQLSGRGQ 190
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV G+ L L + T W RG N+ DG A FYDTYE DG+++AVGALE
Sbjct: 191 VVDAAMVNGAPALAHLLWSMRGTGQWSDDRGTNVFDGSAPFYDTYECSDGKYVAVGALEP 250
Query: 240 QFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL L + L Q +VE R TEKF +T+ EW F + DACVTPVL
Sbjct: 251 QFYAELLRVLDIDPATLGHQRDVEGWPLVRKLFTEKFASRTRDEWAAQFTDVDACVTPVL 310
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A P + R F + GV+ PAPAP SRTP
Sbjct: 311 DFDEAARDPQMMDRNVFT-DLDGVLQPAPAPAFSRTP 346
>gi|419964958|ref|ZP_14480908.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus M213]
gi|424850985|ref|ZP_18275382.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
gi|432350740|ref|ZP_19594088.1| alpha-methylacyl-CoA racemase [Rhodococcus wratislaviensis IFP
2016]
gi|356665650|gb|EHI45721.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
gi|414569677|gb|EKT80420.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus M213]
gi|430769901|gb|ELB85908.1| alpha-methylacyl-CoA racemase [Rhodococcus wratislaviensis IFP
2016]
Length = 365
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 208/336 (61%), Gaps = 7/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L GI V+EFAGL P P +L + GA V+ + + G P D + G++ + NLK
Sbjct: 12 LAGIRVVEFAGLGPGPHAAALLADLGADVVCVQRPGVIPPDGPYDQIQRGRRVVEANLKD 71
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ + + L ++DV++E FR GV E++ LGPDV N RL+Y R++G+GQ+GP +S
Sbjct: 72 PEQVEKVLGLIERADVVIEGFRPGVTERMGLGPDVCLGRNERLVYGRMTGWGQEGPLASA 131
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQV
Sbjct: 132 AGHDINYISLTGVLHAIGRKGERPVPPLNMVGDFGGGSMFLIFGILSALVERQSSGKGQV 191
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+G+ L + + +W RG NLLD GA FYDTYET DG++MAVG++E Q
Sbjct: 192 VDAAMVDGALALSHMMWAFRGRGVWSDERGVNLLDTGAPFYDTYETSDGKYMAVGSIEPQ 251
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL GL + ELPQ + ++ EKF KT+ EW IF TDACV+PVL+
Sbjct: 252 FYALLLQGLELDPAELPQQMDISAWPQMKKVFAEKFLSKTRDEWAAIFLGTDACVSPVLT 311
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
++A S+ H RGS I + GV APAPR SRTP
Sbjct: 312 FAEAPSNEHIAARGSLI-DLDGVTQHAPAPRFSRTP 346
>gi|111022523|ref|YP_705495.1| alpha-methylacyl-CoA racemase [Rhodococcus jostii RHA1]
gi|397735928|ref|ZP_10502614.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
gi|110822053|gb|ABG97337.1| alpha-methylacyl-CoA racemase [Rhodococcus jostii RHA1]
gi|396928221|gb|EJI95444.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
Length = 365
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 208/336 (61%), Gaps = 7/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L GI V+EFAGL P P +L + GA V+ + + G P D + G++ + NLK
Sbjct: 12 LAGIRVVEFAGLGPGPHAAALLADLGADVVCVQRPGVIPPDGPYDQIQRGRRVVEANLKD 71
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ + + L ++DV++E FR GV E++ LGPDV N RL+Y R++G+GQ+GP +S
Sbjct: 72 PEQVEKVLGLIERADVVIEGFRPGVTERMGLGPDVCLGRNERLVYGRMTGWGQEGPLASA 131
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQV
Sbjct: 132 AGHDINYISLTGVLHAIGRKGERPVPPLNMVGDFGGGSMFLIFGILSALVERQTSGKGQV 191
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+G+ L + + +W RG NLLD GA FYDTYET DG++MAVG++E Q
Sbjct: 192 VDAAMVDGALALSHMMWAFRGRGVWSDERGVNLLDTGAPFYDTYETSDGKYMAVGSIEPQ 251
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL GL + ELPQ + ++ EKF KT+ EW IF TDACV+PVL+
Sbjct: 252 FYALLLQGLELDPAELPQQMDISAWPQMKKVFAEKFLSKTRDEWAAIFLGTDACVSPVLT 311
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
++A S+ H RGS I + GV APAPR SRTP
Sbjct: 312 FAEAPSNEHIAARGSLI-DLDGVTQHAPAPRFSRTP 346
>gi|424855786|ref|ZP_18280087.1| fatty acid-CoA racemase [Rhodococcus opacus PD630]
gi|356663538|gb|EHI43664.1| fatty acid-CoA racemase [Rhodococcus opacus PD630]
Length = 364
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 208/340 (61%), Gaps = 14/340 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ----DTVGYGKKSLCINL 58
L G+ VLE AG+ P P MIL + GA V+R+++ V D + ++S+ +L
Sbjct: 5 LHGVKVLELAGIGPGPHAAMILGDLGADVVRVERPSGGLDVTNGRPDHMLRNRRSVTADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A+G +++ +L +DV++E +R G E+L LGP+ NP L+YAR++G+GQDGP
Sbjct: 65 KTAEGRALVLDLVAVADVLIEGYRPGTTERLGLGPEDCSAVNPALVYARMTGWGQDGPLR 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G L +G + P PP NL DFGGG + +GI+ AL ER SGRG
Sbjct: 125 IRAGHDINYIALTGALHAIG-TDDKPIPPLNLVGDFGGGSMFLVVGILSALLERQHSGRG 183
Query: 179 QVIDCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
QV+D MV+GS+ L +W R D W R NL+DGGA FYDTY+ DG+++AVGA
Sbjct: 184 QVVDAAMVDGSSVLMQMAWAMRGVDA--WTDERRANLVDGGAPFYDTYQCADGKWIAVGA 241
Query: 237 LESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E QFYA LL GLG+ ELP Q++ E R TE + + W +F +TDACVT
Sbjct: 242 IEPQFYAHLLDGLGVDTAELPGQNDREQWPQLRKVFTEVIASRDRDHWATVFADTDACVT 301
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
PVLSL +A + H R + I G+ PAPAPR SRTP
Sbjct: 302 PVLSLDEAAAGDHLAQRATII-EVDGIQQPAPAPRFSRTP 340
>gi|221369192|ref|YP_002520288.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides KD131]
gi|221162244|gb|ACM03215.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodobacter
sphaeroides KD131]
Length = 393
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 213/364 (58%), Gaps = 14/364 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQ---DTVGYGKKSLCI 56
L G+ ++E GL P PF M+L++ GA VIR+ A+ P + D + G++S+ I
Sbjct: 19 LAGLRIVEMVGLGPCPFAAMMLSDAGAEVIRVHPLAARAEIPLMDTEFDVLARGRRSIAI 78
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ +G++++ +LA ++D ++E FR GVME+L LGP NPRL+Y R++G+GQDGP
Sbjct: 79 DLKRPEGVALLLDLAERADGLMEGFRPGVMERLGLGPAECHARNPRLVYGRMTGWGQDGP 138
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHD+ Y+ LSG+L LG +R P P NL DFGGGG+M A G+V AL + +G
Sbjct: 139 LAATAGHDLTYIALSGVLGALGPADRPPAVPLNLIGDFGGGGMMLAFGMVAALLQARATG 198
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D M EG++ L + + + W R NLLDGGA FY TYE DGRF+AV
Sbjct: 199 RGQVVDAAMTEGASLLAAMIWGFRAGGAWQDGRQANLLDGGAWFYGTYECADGRFLAVAP 258
Query: 237 LESQFYAQLLAGLGMTEEEL---PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+E +F L L EL P + R +L + K + EW +F TDACV P
Sbjct: 259 IEGRFARTFLERLAPEAAELRQGPPADWPAQRTRLAGILRTKPRDEWVALFAGTDACVAP 318
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVL 352
VL S+A HP R SF+ GV PAPAPR S G + PA PG T E+L
Sbjct: 319 VLDWSEAPEHPQARARESFV-TVGGVPQPAPAPRFS---GFAGPRPSPPARPGADTAEIL 374
Query: 353 RHFG 356
+G
Sbjct: 375 ARWG 378
>gi|333989762|ref|YP_004522376.1| alpha-methylacyl-CoA racemase [Mycobacterium sp. JDM601]
gi|333485730|gb|AEF35122.1| alpha-methylacyl-CoA racemase Mcr [Mycobacterium sp. JDM601]
Length = 361
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 208/336 (61%), Gaps = 9/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRID---KHGAQPFVQDTVGYGKKSLCINLK 59
L G+ V+E AG+ P P MIL + GA V+R+D K GA+ +DT+ ++S+ +LK
Sbjct: 5 LTGLRVIELAGIGPGPHAAMILGDLGADVVRVDRPPKFGAEA-SKDTMLRNRRSVTADLK 63
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G ++ L ++DV++E FR GV E+L LGP+ K N +LIY R++G+GQ GP +
Sbjct: 64 SPEGRDLVLKLVAKADVLIEGFRPGVTERLGLGPEDCAKINDKLIYGRMTGWGQTGPRAL 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G L +G + P PP NLA DFGGG + +GI+ AL+ER SG+GQ
Sbjct: 124 QAGHDINYISLNGTLHSIGRKGERPVPPLNLAGDFGGGSMFLLVGILSALWERQSSGKGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+GS+ LG+ + + LW RG N+LD GA +YDTYE DGR+M+VGA+E
Sbjct: 184 VIDAAMVDGSSMLGAMMWSFRAQGLWSDERGVNMLDTGAPYYDTYECSDGRYMSVGAIEP 243
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A+LLA LG+ ELP + R T+ F + W ++F +DACV PVL
Sbjct: 244 QFFAELLAKLGLDPAELPAQNDTSRWPELREVFTKAFAAHDRDHWAKVFATSDACVAPVL 303
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + + H R +F + G + P PAPR SR+
Sbjct: 304 AFGEVLADSHIAERDTFY-DVDGYLQPRPAPRFSRS 338
>gi|383820760|ref|ZP_09976013.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
phlei RIVM601174]
gi|383334677|gb|EID13115.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
phlei RIVM601174]
Length = 363
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 216/363 (59%), Gaps = 15/363 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L+G+ V+E A + P P MIL + GA V+RI++ G + ++ ++S+ +L
Sbjct: 5 LEGLRVIELASIGPGPHAAMILGDLGADVVRIERPGKLGGIPTTKREATLRNRRSVAADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ L ++DV++E R GV E+L LGP+ K N +LIY R++G+GQ GP +
Sbjct: 65 KSPEGRELVLKLVAKADVLIEGLRPGVTERLGLGPEDCFKVNEKLIYGRMTGWGQTGPRA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G+L +G P PP NLA DFGGG + +GI+ AL+ER SG+G
Sbjct: 125 QQAGHDINYISLNGVLHAIGRAGERPVPPLNLAGDFGGGSMFLLVGILAALYERQNSGKG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+GS+ L + LW RG N+LDGGA +YDTY DGR++AVG +E
Sbjct: 185 QVIDAAMVDGSSVLIQMMWSFLQDGLWRDERGVNILDGGAPYYDTYTCSDGRYIAVGCIE 244
Query: 239 SQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+ L GLG+ +LP Q+++ RAK E K + W ++F+ TDACVTPV
Sbjct: 245 PQFYAEFLKGLGLENADLPDQNDMARWPELRAKFAEVIGSKDRDHWAKVFEGTDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGV-VAPAPAPRLSRT-PGTSKITEHNPAPGVHTREVL 352
LS S+ + PH R +F R G + P PAPR SRT P K PG T VL
Sbjct: 305 LSFSEVLTEPHIAERDTFY--RDGEHLQPMPAPRFSRTAPSAPKPPGQ---PGADTEAVL 359
Query: 353 RHF 355
R +
Sbjct: 360 RDW 362
>gi|418419012|ref|ZP_12992197.1| fatty-acid-CoA racemase Far [Mycobacterium abscessus subsp.
bolletii BD]
gi|364002185|gb|EHM23377.1| fatty-acid-CoA racemase Far [Mycobacterium abscessus subsp.
bolletii BD]
Length = 350
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 210/334 (62%), Gaps = 10/334 (2%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKAKGL 64
+ V+E G+ P P M+L++ GA VIR+ + G ++T + + +NL K
Sbjct: 1 MKVIELGGIGPGPHAAMMLSDLGADVIRVRRPGGLAIPAEETDLFHRGKRLVNLDVKKDP 60
Query: 65 SVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHD 124
+ L +++DV+L+PFR GV E++ +GP K NPRLI+AR++G+GQ GP + AGHD
Sbjct: 61 EALLALVDKADVLLDPFRPGVCERIGIGPQECAKRNPRLIFARMTGWGQHGPMADRAGHD 120
Query: 125 INYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCN 184
INYL L+G L +G+++R P PP NL ADFGGG ++ GI+ AL+ER KSG+GQVID
Sbjct: 121 INYLSLTGALGSMGYKDRPPMPPMNLVADFGGGSMLLVQGILAALYEREKSGKGQVIDGA 180
Query: 185 MVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + L W T + L+D+ R LLDGG+ FY TYET DG++MAVG++E QF+
Sbjct: 181 MVDGVSQLAQMQW-TMYNNGLLFDE-REAGLLDGGSPFYGTYETSDGKYMAVGSIEPQFF 238
Query: 243 AQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L+ GLG+ E +P + R + FK KT+ EW EIF TDACV+PVL+
Sbjct: 239 AILVQGLGLDPESVPFQLDKARYPEMRKMFDDAFKTKTRDEWTEIFIGTDACVSPVLTWG 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A + H RG+ + + GV APAPR SRTP
Sbjct: 299 EAKQNEHLRDRGTIV-DVDGVTQAAPAPRFSRTP 331
>gi|291455330|ref|ZP_06594720.1| racemase [Streptomyces albus J1074]
gi|291358279|gb|EFE85181.1| racemase [Streptomyces albus J1074]
Length = 384
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 212/362 (58%), Gaps = 12/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 23 LHGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLGIDPALDLTNRNKRSVLVDL 82
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +L ++D+++E +R GV E+L +GPD NPRL+Y R++G+GQ+GP +
Sbjct: 83 KAEDGAARVLDLVERADILVEGYRPGVAERLGVGPDACLARNPRLVYGRMTGWGQEGPLA 142
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ ++G L L+G + P P NL D+ GG L G++ AL G G
Sbjct: 143 DRAGHDIGYIAVTGALGLVGEPDAPPAVPANLVGDYAGGSLYLVTGVLAALHHARAHGTG 202
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + +W R NLLDGGA FY Y T DG MAVGALE
Sbjct: 203 QVVDAAIVDGTAHLTTMIHAMFGAGVWQDRRRSNLLDGGAPFYGCYATADGGHMAVGALE 262
Query: 239 SQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+ LG+ EE Q ++ + R +T +F +T+ EW E+F TDACV PVL
Sbjct: 263 PRFYAEFARVLGLPEETPDQFDLARWDELREAVTARFASRTREEWTELFAGTDACVAPVL 322
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SL++A SHPH R +F + G V PAPAPR S TP + PA PG T EV R
Sbjct: 323 SLAEAASHPHLAARETFTTHE-GRVQPAPAPRFSATPTAVRT---GPALPGADTAEVARD 378
Query: 355 FG 356
+G
Sbjct: 379 WG 380
>gi|319763656|ref|YP_004127593.1| l-carnitine dehydratase/bile acid-inducible protein f
[Alicycliphilus denitrificans BC]
gi|317118217|gb|ADV00706.1| L-carnitine dehydratase/bile acid-inducible protein F
[Alicycliphilus denitrificans BC]
Length = 386
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 204/340 (60%), Gaps = 12/340 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L GI V+E AG+ P P M L + GATVIR+D+ GA VQ +G ++S+ +
Sbjct: 9 LAGIKVVEIAGIGPGPLAAMFLADLGATVIRVDRKEPSGLGAPRPVQFDLGLRNRRSIRV 68
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ L Q+D ++E FR GVME+L LGPD K+NPRL+Y R++G+GQDGP
Sbjct: 69 DLKDPAAVELVMELVGQADALIEGFRPGVMERLGLGPDACLKANPRLVYGRVTGWGQDGP 128
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S +AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 129 LSQVAGHDLNYISITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARTSG 188
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A + + + K RG NLLD GAHFY+ YE DGR ++V
Sbjct: 189 QGQVVDAAMVDGVASIMTVTMGLHAAGMMRKERGTNLLDTGAHFYEVYECADGRHLSVAP 248
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVET-----GRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E +FY LL LG+ + L Q +++ + L +FKE+T+ EW + + DACV
Sbjct: 249 IEGKFYRLLLEKLGLQDHPLLQQQMDKACWPEAKQVLAARFKERTRDEWTALLGHLDACV 308
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL +A HPH RG+ AGVV PAP PR SRT
Sbjct: 309 APVLDFDEAPRHPHVKARGTLT-EVAGVVQPAPGPRFSRT 347
>gi|41406883|ref|NP_959719.1| Far [Mycobacterium avium subsp. paratuberculosis K-10]
gi|417747256|ref|ZP_12395729.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
avium subsp. paratuberculosis S397]
gi|440776218|ref|ZP_20955068.1| Far [Mycobacterium avium subsp. paratuberculosis S5]
gi|41395233|gb|AAS03102.1| Far [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461195|gb|EGO40071.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
avium subsp. paratuberculosis S397]
gi|436723709|gb|ELP47494.1| Far [Mycobacterium avium subsp. paratuberculosis S5]
Length = 359
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 207/337 (61%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVRVIELGGIGPGPHAGMVLADLGADVVRVRRPGVAAMPSEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ +LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQ GP +
Sbjct: 67 ARP--QALLDLAAKADVLLDCFRPGTCERLGIGPDDCAAVNPRLIFARITGWGQHGPLAQ 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G+LS LG +R P PP NL ADFGGG ++ LGI AL+ER +SGRGQ
Sbjct: 125 TAGHDINYLSQTGVLSALGHADRPPLPPLNLVADFGGGSMLVLLGITAALYERERSGRGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + T R LLDGGA FY YET DG+++AVGA+E
Sbjct: 185 VIDAAMVDGVSLLAQMMWTMKSTGALRDRRESFLLDGGAPFYGCYETADGKYVAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LL GLG++ EE+P + R T++F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLDGLGLSPEEVPGQLDRDSYPRMREVFTQRFAARTRDEWARVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ S+A + H R + I GV APAPR S TP
Sbjct: 305 TWSEAAASEHLRARSTVI-TAHGVDQAAPAPRFSHTP 340
>gi|433640973|ref|YP_007286732.1| Putative fatty-acid-CoA racemase Far [Mycobacterium canettii CIPT
140070008]
gi|432157521|emb|CCK54799.1| Putative fatty-acid-CoA racemase Far [Mycobacterium canettii CIPT
140070008]
Length = 359
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 209/337 (62%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVKVIELGGIGPGPHAGMVLADLGADVVRVRRPGGLTMPSEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +S
Sbjct: 67 TQP--QALLELAAKADVLLDCFRPGTCERLGIGPDDCASVNPRLIFARITGWGQDGPLAS 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G L+ G+ +R P PP NL ADFGGG ++ LGIV+AL+ER +SG GQ
Sbjct: 125 TAGHDINYLSQTGALAAFGYADRPPMPPLNLVADFGGGSMLVLLGIVVALYERERSGVGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G + L + + R LLDGGA FY YET DG++MAVGA+E
Sbjct: 185 VVDAAMVDGVSVLAQMMWTMKGIGSLRDQRESFLLDGGAPFYRCYETSDGKYMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LL+GLG++ ++P G ++ E+F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLSGLGLSAADVPTQLDVAGYPQMYDIFAERFASRTRDEWTRVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ S+A ++ H R + I GV APAPR SRTP
Sbjct: 305 TWSEAANNDHLKARSTVI-TAHGVQQAAPAPRFSRTP 340
>gi|359147699|ref|ZP_09180979.1| fatty acid-CoA racemase [Streptomyces sp. S4]
Length = 371
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 212/362 (58%), Gaps = 12/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 10 LHGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLGIDPALDLTNRNKRSVLVDL 69
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +L ++D+++E +R GV E+L +GPD NPRL+Y R++G+GQ+GP +
Sbjct: 70 KAEDGAARVLDLVERADILVEGYRPGVAERLGVGPDACLARNPRLVYGRMTGWGQEGPLA 129
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ ++G L L+G + P P NL D+ GG L G++ AL G G
Sbjct: 130 DRAGHDIGYIAVTGALGLVGEPDAPPAVPANLVGDYAGGSLYLVTGVLAALHHARAHGAG 189
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + +W R NLLDGGA FY Y T DG MAVGALE
Sbjct: 190 QVVDAAIVDGTAHLTTMIHAMFGAGVWQDRRRSNLLDGGAPFYGCYATADGGHMAVGALE 249
Query: 239 SQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+ LG+ EE Q ++ + R +T +F +T+ EW E+F TDACV PVL
Sbjct: 250 PRFYAEFARVLGLPEETPDQFDLARWDELREAVTARFASRTREEWTELFAGTDACVAPVL 309
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SL++A SHPH R +F + G V PAPAPR S TP + PA PG T EV R
Sbjct: 310 SLAEAASHPHLAARETFTTHE-GRVQPAPAPRFSATPTAVRT---GPALPGADTAEVARD 365
Query: 355 FG 356
+G
Sbjct: 366 WG 367
>gi|397737833|ref|ZP_10504497.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
gi|396926312|gb|EJI93557.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
Length = 372
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/370 (44%), Positives = 227/370 (61%), Gaps = 16/370 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-PFVQDTVG---YGKKSLCINL 58
L GI V+EFAG+ PAPF GM+L + GATV+R+ + GA P G G+ + +L
Sbjct: 5 LTGIKVVEFAGMGPAPFAGMLLADMGATVVRVQRAGAAVPGGLPGTGAELRGRTEVIADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A ++ L ++DV+LE +R GVME+L LGPD L NPRLIY R++GYGQ+GP +
Sbjct: 65 KDADDRDSVRRLVAEADVLLEGYRPGVMERLGLGPDELLAVNPRLIYGRMTGYGQNGPLA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+ GHDINYL ++G+L + P P NL D+GGGG++ ALG+V AL + +++GRG
Sbjct: 125 QVPGHDINYLAIAGVLGAIRRDGERPLAPLNLVGDYGGGGMLLALGVVSALVQVARTGRG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
+V+D MV+G+A L + Q WD+P G NLLD GA FY+ YET DG MAVGA+E
Sbjct: 185 EVVDAAMVDGAAQLATLFFAFQSAGGWDRP-GTNLLDSGAPFYEVYETADGGHMAVGAIE 243
Query: 239 SQFYAQLLAGLGMTEEELPQHEVE---TGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
SQFY +LL L +T + PQ + + + + F+ +T+ EW ++ +TDAC TPVL
Sbjct: 244 SQFYVELLRFLDITTADAPQWDRDRWPQTKERFAAVFRTRTRQEWTDLLQHTDACATPVL 303
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+L +A SHPHNV R SF + + P+PAPR G K P V VL+ +
Sbjct: 304 TLDEAPSHPHNVARDSFR-QQNELTVPSPAPRF----GGRK---AGPIETVALVLVLQQW 355
Query: 356 GYSDANIEEL 365
G S A++ L
Sbjct: 356 GLSAADVTRL 365
>gi|407779923|ref|ZP_11127173.1| L-carnitine dehydratase/bile acid-inducible protein F
[Nitratireductor pacificus pht-3B]
gi|407298310|gb|EKF17452.1| L-carnitine dehydratase/bile acid-inducible protein F
[Nitratireductor pacificus pht-3B]
Length = 387
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/379 (40%), Positives = 217/379 (57%), Gaps = 18/379 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-GAQPFVQ-----DTVGYGKKSLCI 56
L G+ V+E AGL P P G++L E GA V+RI++ A+ F++ D +G++ L +
Sbjct: 9 LSGLAVIEMAGLGPVPLAGLMLAEMGADVLRIERRDAARAFLKVPPQYDLDRHGREILKL 68
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ +G +++ L +DV++E FR GVME+L GP+ NPRL+Y R++G+GQ+GP
Sbjct: 69 DLKRDEGRALLMTLIGGADVLIEGFRPGVMERLGAGPEAALACNPRLVYGRMTGFGQEGP 128
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+ YL SG+LS++G RN P PP NL D+GGG + G++ AL ER++SG
Sbjct: 129 LADRAGHDLTYLAYSGVLSMIGRRNARPVPPLNLVGDYGGGTMFLIAGVLAALIERAQSG 188
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G++ L + T W RGENLLDG A FYDTYE DG +AV
Sbjct: 189 KGQVVDTAMVDGASMLAAPFFGFAATGFWRAARGENLLDGDAPFYDTYEAADGGHLAVAC 248
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVT 292
LE QF+A+ L + + E ++ + EK + W +F TDACV
Sbjct: 249 LEPQFFAEFARLLPLDKALAAAQYDEACWPRMRAAIAARIAEKPRDAWAALFSGTDACVA 308
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL+L +A HPHN R + + G PAPAPR SRT G PA L
Sbjct: 309 PVLTLKEAAEHPHNRARNAHA-TQGGFTRPAPAPRFSRTQGEIA----QPA---RPASAL 360
Query: 353 RHFGYSDANIEELIREDVI 371
FG + +E L E VI
Sbjct: 361 NRFGIAPEEVERLAAEGVI 379
>gi|324999451|ref|ZP_08120563.1| L-carnitine dehydratase/bile acid-inducible protein F
[Pseudonocardia sp. P1]
Length = 386
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 203/343 (59%), Gaps = 22/343 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-----AQPFVQDTVGYGKKSLCIN 57
L G TV+E AGL PAPF M + + GA VIR+D+ G P D + GK+S+ ++
Sbjct: 7 LAGRTVVELAGLGPAPFACMAMADLGAEVIRVDRPGPDNGPGAPSAADVLNRGKRSIVLD 66
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK+ + + L +DV++E +R GV E+L LGPDV+ NP L+Y R++G+GQDGP
Sbjct: 67 LKQPSAVDAVLTLCESADVLVEGYRPGVAERLGLGPDVVAARNPALVYGRMTGWGQDGPI 126
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
++ AGHDI Y+ ++G L +G P P NL DFGGG +GI+ L + ++GR
Sbjct: 127 ANSAGHDIGYIAVTGALHAIGEAGGPPRIPLNLVGDFGGGATYLVIGILAGLLDADRTGR 186
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQ++D +V+G+++L + + + W RG NLLDGGA +Y YET DGR MAVGA+
Sbjct: 187 GQIVDAAIVDGTSHLLAAIHSMLGSGRWVDERGANLLDGGAPYYSVYETADGRHMAVGAI 246
Query: 238 ESQFYAQLLAGLGMTEEEL-----------PQHEVETGRAKLTEKFKEKTQAEWCEIFDN 286
E +F+A+LL L + EL PQH R +F+ +++ EW +FD
Sbjct: 247 EPKFFAELLRLLDIGPAELDAAAQQDRSAWPQH-----RELFAARFRSRSRDEWTAVFDG 301
Query: 287 TDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS 329
TDACV PVLSL +AT HP RGS I GVV P APR S
Sbjct: 302 TDACVAPVLSLREATDHPQVAARGSVIETD-GVVQPGTAPRFS 343
>gi|397728934|ref|ZP_10495724.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
gi|396935219|gb|EJJ02339.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
Length = 365
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 203/337 (60%), Gaps = 8/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L GI VLE AG+ P P M+L + GA V+R+ + G P T G+ + +LK
Sbjct: 11 LAGIRVLELAGMGPGPHAAMLLADLGADVVRVQRAGGLPAPDRTASQQLRGRTIVEADLK 70
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + ++++ L +++DV++E FR GV E++ LGPD NPRLIY R++G+GQ GP +
Sbjct: 71 RPEDVAMVLGLLDRADVLVEGFRPGVTERMGLGPDEALTRNPRLIYGRVTGWGQSGPRAL 130
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ ++G+L +G ++ P PP NL DFGGG + +G++ AL ER SGRGQ
Sbjct: 131 QAGHDLNYISVTGLLHAVGRKDERPVPPLNLFGDFGGGSMFLVVGVLAALVERQLSGRGQ 190
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV G+ L L + T W RG N+ DG A FYDTYE DG+++AVGALE
Sbjct: 191 VVDAAMVNGAPALAHLLWSMRGTGQWSDDRGTNVFDGSAPFYDTYECSDGKYVAVGALEP 250
Query: 240 QFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL L + L Q +VE R TEKF +T+ EW F + DACVTPVL
Sbjct: 251 QFYAELLRVLDIDPATLGHQRDVEGWPLVRKLFTEKFASRTRDEWAAQFVDVDACVTPVL 310
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A P + R F + GV+ PAPAP SRTP
Sbjct: 311 DFDEAARDPQMMDRNVFT-DLDGVLQPAPAPAFSRTP 346
>gi|407276386|ref|ZP_11104856.1| putative acyl-CoA transferase/carnitine dehydratase [Rhodococcus
sp. P14]
Length = 368
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 213/368 (57%), Gaps = 13/368 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFVQDTVGYGKKSLCINL 58
L G+ V+E AG+ P+P M+L + GA V+RI++ G P QD ++S+ +L
Sbjct: 5 LDGLRVVELAGIGPSPHAAMLLADLGADVVRIERPGGVSQLLPVEQDAGLRNRRSVRADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K L + +L + +DV++E +R G E+L +GP+V NPRL+YAR++G+GQDGP +
Sbjct: 65 KDPDDLQRVLDLVDNADVLIEGYRPGAAERLGIGPEVCRARNPRLVYARITGWGQDGPLA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL L+G L+ +G + P P NL AD GGG ++ GI+ AL+ R +SG+G
Sbjct: 125 PYAGHDINYLALTGALNAIGRKGERPLAPLNLVADLGGGSMLAITGILGALYARERSGQG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D MV+G + L + + LW RG N++DG A FYDTYE DGR++AVGA+E
Sbjct: 185 DVVDVAMVDGVSTLMTMYWTLTENGLWSADRGTNVVDGAAPFYDTYECADGRYVAVGAVE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
FYA LL GLG+ LP T R + E F+ + + EW E F DAC TPV
Sbjct: 245 PAFYAHLLTGLGLDPAHLPDQYDRTAWPTVRTRFAEIFRGRDRDEWVEHFAPLDACFTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR-TPGTSKITEHNPAPGVHTREVLR 353
L+L + +HPH RG+ + + G PA +PR + P T PG T VLR
Sbjct: 305 LALDEVAAHPHIAARGTVVES-FGQRQPAASPRFANAAPATYSAPR---VPGADTDAVLR 360
Query: 354 HFGYSDAN 361
+G A+
Sbjct: 361 DWGVDGAD 368
>gi|440705694|ref|ZP_20886460.1| CoA-transferase family III protein [Streptomyces turgidiscabies
Car8]
gi|440272535|gb|ELP61419.1| CoA-transferase family III protein [Streptomyces turgidiscabies
Car8]
Length = 378
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 212/360 (58%), Gaps = 10/360 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 12 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGTGLAVDPEYDVTNRNKRSVIVDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A G S + +LA ++D+++E +R GV E+L +GP+ NPRL+Y R++G+GQ+GP +
Sbjct: 72 KAADGPSRVLDLAARADILVEGYRPGVAERLGIGPEPCHARNPRLVYGRMTGWGQEGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+GHDI YL +G+L ++G P P NL DF GG L +G++ AL +G G
Sbjct: 132 RRSGHDIAYLAPTGVLGMIGNPQEPPPVPANLLGDFAGGSLYLVVGVLAALHHARATGTG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG +Y TYET DGR+MAVGALE
Sbjct: 192 QVVDAAIVDGAAHLATMIHGMLAAGGWQDRRGANLLDGGCPYYGTYETADGRYMAVGALE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFY + L LG+ E + ++ R +T +F +T+ EW +F+ +DACV PVL
Sbjct: 252 PQFYKEFLDLLGLPEHAAARKDITRWNDLREAVTARFATRTRDEWTAVFEGSDACVAPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
SL +A HPH RG+F + G+ PAPAPR S + + I PG T +V R +
Sbjct: 312 SLREAPHHPHLAARGTFT-DHGGITQPAPAPRFSVS--HTSIRGGPARPGADTADVARDW 368
>gi|88703602|ref|ZP_01101318.1| L-carnitine dehydratase/bile acid-inducible protein F
[Congregibacter litoralis KT71]
gi|88702316|gb|EAQ99419.1| L-carnitine dehydratase/bile acid-inducible protein F
[Congregibacter litoralis KT71]
Length = 377
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 226/371 (60%), Gaps = 12/371 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-PFVQDTV-GYGKKSLCINLKK 60
L G TV+E AG+ PAP GM+L + GA VIR+D+ A P ++V G GKKS+ +NLK
Sbjct: 4 LNGYTVIELAGIGPAPMGGMMLADQGAEVIRVDRAAADAPSPLESVSGRGKKSVVLNLKS 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ + + +DV+++PFR GV EKL +GP+V K NP+L++AR++G+GQDGP +
Sbjct: 64 PEGIEALLRMVENADVLIDPFRPGVCEKLGIGPEVCLKRNPKLVFARMTGWGQDGPLAKA 123
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G L G P PP NL D GGGG++ G++ AL E + SG+GQV
Sbjct: 124 AGHDINYIALTGALFANGEGAGRPMPPLNLVGDMGGGGMLLVNGVLAALLETASSGQGQV 183
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGE-NLLDGGAHFYDTYETKDGRFMAVGALES 239
ID MV+G+A L LW+ + E N+LDGG HFY+TYE DG ++++G++E
Sbjct: 184 IDIAMVDGAAQLMWMFHSFYGAGLWNADQREANMLDGGTHFYNTYECADGEYVSIGSIEP 243
Query: 240 QFYAQLLAGLGMTEEEL-----PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA L+ G++E + P E +A L ++KT+ EWCE+ + +D C PV
Sbjct: 244 QFYALLMEKAGLSEADFGEQNNPARWPEQKKA-LASVMRQKTRDEWCELMEGSDVCFAPV 302
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
L ++AT+H V R S+I GVV PAPAPR SRT T + A G T VL
Sbjct: 303 LRFTEATTHKAAVARDSYI-ELDGVVQPAPAPRFSRTAAT--VAHGARANGADTESVLGA 359
Query: 355 FGYSDANIEEL 365
G+ + I L
Sbjct: 360 MGFGEQEIASL 370
>gi|403725975|ref|ZP_10946927.1| putative fatty acid-CoA racemase [Gordonia rhizosphera NBRC 16068]
gi|403204815|dbj|GAB91258.1| putative fatty acid-CoA racemase [Gordonia rhizosphera NBRC 16068]
Length = 388
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 222/382 (58%), Gaps = 25/382 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--------------HGAQP-FVQDTV 47
L G+ ++EFA L P P+C M+L++ GA V+RID+ +G QP FV D
Sbjct: 6 LTGVKIIEFAALGPGPWCAMMLSDLGAEVLRIDRPSAVGALRTDLGAANGRQPAFVND-- 63
Query: 48 GYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYAR 107
G++S+ I+LK G++ + L ++DV +E R GVME+L LGPDV NPRL+Y R
Sbjct: 64 -RGRRSVAIDLKHPDGVATVMRLIERADVAIEGNRPGVMERLGLGPDVCRVRNPRLVYGR 122
Query: 108 LSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVM 167
+G+GQ+GP GHD+NYL ++G+L+ +G P+ P NL D+ GGGL+ A+G+V
Sbjct: 123 ATGWGQEGPLGQTVGHDLNYLAMTGLLATMGPTGGAPSIPLNLLGDYAGGGLLLAMGVVS 182
Query: 168 ALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETK 227
AL E +SG GQV+D MV+G +GS + L RG N LDGGA FY YET
Sbjct: 183 ALLETQRSGCGQVVDAAMVDGIGLIGSVFYGQRQAGLLSLDRGTNALDGGAPFYHVYETS 242
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEI 283
DG +MAV A+E++F+A LL+ L + E Q L E+ F ++T+++W E
Sbjct: 243 DGGWMAVAAIEAKFFANLLSVLEVPAEIAEQQWDRDRWPSLCEEFAAIFAQRTRSQWEEA 302
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA 343
FD +ACVTPVL L +A H R +F+P GV+ PAPAPR SRTPG ++
Sbjct: 303 FDGAEACVTPVLDLDEAIKAEHATAREAFVPVD-GVLQPAPAPRFSRTPG--RVQGPAVP 359
Query: 344 PGVHTREVLRHFGYSDANIEEL 365
G +T L +G ++ L
Sbjct: 360 AGANTNAALADWGIDLDDLTSL 381
>gi|226349943|ref|YP_002777056.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus B4]
gi|226245858|dbj|BAH47125.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus B4]
Length = 365
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 208/336 (61%), Gaps = 7/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L GI V+EFAGL P P +L + GA V+ + + G P D + G++ + NLK
Sbjct: 12 LAGIRVVEFAGLGPGPHAAALLADLGADVVCVQRPGVIPPDGPYDQIQRGRRVVEANLKD 71
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ + + L ++DV++E FR GV E++ LGPDV + N RL+Y R++G+GQ+GP +
Sbjct: 72 PEQVEKVLGLIERADVVIEGFRPGVTERMGLGPDVCLERNERLVYGRMTGWGQEGPLAGA 131
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQV
Sbjct: 132 AGHDINYISLTGVLHAIGRKGERPVPPLNMVGDFGGGSMFLIFGILSALVERQTSGKGQV 191
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+G+ L + + +W RG NLLD GA FYDTYET DG++MAVG++E Q
Sbjct: 192 VDAAMVDGALALSHMMWAFRGRGVWSDERGVNLLDTGAPFYDTYETSDGKYMAVGSIEPQ 251
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FYA LL GL + ELPQ + ++ EKF KT+ EW IF TDACV+PVL+
Sbjct: 252 FYALLLQGLELDPAELPQQMDVSAWPQMKKVFAEKFLSKTRDEWAAIFLGTDACVSPVLT 311
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
++A S+ H RGS + + GV APAPR SRTP
Sbjct: 312 FAEAPSNEHIAARGSLV-DLDGVTQHAPAPRFSRTP 346
>gi|414581845|ref|ZP_11438985.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-1215]
gi|420882610|ref|ZP_15345974.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0421]
gi|421047607|ref|ZP_15510603.1| fatty-acid-CoA racemase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|392091665|gb|EIU17476.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-0421]
gi|392116997|gb|EIU42765.1| fatty-acid-CoA racemase [Mycobacterium abscessus 5S-1215]
gi|392241772|gb|EIV67259.1| fatty-acid-CoA racemase [Mycobacterium massiliense CCUG 48898]
Length = 348
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 210/332 (63%), Gaps = 10/332 (3%)
Query: 8 VLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKAKGLSV 66
++E G+ P P M+L++ GA VIR+ + G ++T + + +NL K
Sbjct: 1 MIELGGIGPGPHAAMMLSDLGADVIRVRRPGGLAIPAEETDLFHRGKRLVNLDVKKDPEA 60
Query: 67 MKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDIN 126
+ L +++DV+L+PFR GV E++ +GP+ K NPRLI+AR++G+GQ GP + AGHDIN
Sbjct: 61 LLALVDKADVLLDPFRPGVCERIGIGPEECAKRNPRLIFARMTGWGQHGPMADRAGHDIN 120
Query: 127 YLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMV 186
YL L+G L +G+++R P PP NL ADFGGG ++ GI+ AL+ER KSG+GQVID MV
Sbjct: 121 YLSLTGALGSMGYKDRPPMPPMNLVADFGGGSMLLVQGILAALYEREKSGKGQVIDGAMV 180
Query: 187 EGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQ 244
+G + L W T + L+D+ R LLDGG+ FY TYET DG++MAVG++E QF+A
Sbjct: 181 DGVSQLAQMQW-TMYNNGLLFDE-REAGLLDGGSPFYGTYETSDGKYMAVGSIEPQFFAI 238
Query: 245 LLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
L+ GLG+ E +P + R + FK KT+ EW EIF TDACV+PVL+ +A
Sbjct: 239 LVQGLGLDPESVPFQLDKARYPEMRKMFDDAFKTKTRDEWTEIFIGTDACVSPVLTWGEA 298
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ H RG+ + + GV APAPR SRTP
Sbjct: 299 KQNEHLRDRGTIV-DVDGVTQAAPAPRFSRTP 329
>gi|420920509|ref|ZP_15383806.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0728-S]
gi|392130345|gb|EIU56091.1| fatty-acid-CoA racemase [Mycobacterium abscessus 6G-0728-S]
Length = 348
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 210/332 (63%), Gaps = 10/332 (3%)
Query: 8 VLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKAKGLSV 66
++E G+ P P M+L++ GA VIR+ + G ++T + + +NL K
Sbjct: 1 MIELGGIGPGPHAAMMLSDLGADVIRVRRPGGLAIPAEETDLFHRGKRLVNLDVKKDPEA 60
Query: 67 MKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDIN 126
+ L +++DV+L+PFR GV E++ +GP+ K NPRLI+AR++G+GQ GP + AGHDIN
Sbjct: 61 LLALVDKADVLLDPFRPGVCERIGIGPEECAKRNPRLIFARMTGWGQHGPMADRAGHDIN 120
Query: 127 YLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMV 186
YL L+G L +G+++R P PP NL ADFGGG ++ GI+ AL+ER KSG+GQVID MV
Sbjct: 121 YLSLTGALGSMGYKDRPPMPPMNLVADFGGGSMLLVQGILAALYEREKSGKGQVIDGAMV 180
Query: 187 EGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQ 244
+G + L W T + L+D+ R LLDGG+ FY TYET DG++MAVG++E QF+A
Sbjct: 181 DGVSQLAQMQW-TMYNNGLLFDE-REAGLLDGGSPFYGTYETSDGKYMAVGSIEPQFFAI 238
Query: 245 LLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
L+ GLG+ E +P + R + FK KT+ EW EIF TDACV+PVL+ +A
Sbjct: 239 LVQGLGLDPESVPFQLDKARYPEMRKMFDDAFKTKTRDEWTEIFIGTDACVSPVLTWGEA 298
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ H RG+ + + GV APAPR SRTP
Sbjct: 299 KQNEHLRDRGTIV-DVDGVTQAAPAPRFSRTP 329
>gi|118465733|ref|YP_880236.1| alpha-methylacyl-CoA racemase [Mycobacterium avium 104]
gi|118167020|gb|ABK67917.1| alpha-methylacyl-CoA racemase [Mycobacterium avium 104]
Length = 359
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 207/337 (61%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVRVIELGGIGPGPHAGMVLADLGADVVRVRRPGVAAMPSEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ +LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQ GP +
Sbjct: 67 ARP--QALLDLAAKADVLLDCFRPGTCERLGIGPDDCAAVNPRLIFARITGWGQHGPLAQ 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G+LS LG +R P PP NL ADFGGG ++ LGI AL+ER +SGRGQ
Sbjct: 125 TAGHDINYLSQTGVLSALGHADRPPLPPLNLVADFGGGSMLVLLGITAALYERERSGRGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + T R LLDGGA FY YET DG+++AVGA+E
Sbjct: 185 VIDAAMVDGVSLLAQMMWTMKSTGALRDRRESFLLDGGAPFYGCYETADGKYVAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LL GLG++ EE+P + R T++F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLDGLGLSPEEVPGQLDRDSYPRMREIFTQRFAGRTRDEWARVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ S+A + H R + I GV APAPR S TP
Sbjct: 305 TWSEAAASEHLRARSTVI-TAHGVDQAAPAPRFSHTP 340
>gi|411002018|ref|ZP_11378347.1| fatty acid-CoA racemase [Streptomyces globisporus C-1027]
Length = 379
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 12/357 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 12 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLGIDPAYDLTNRNKRSVVLDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + +L ++D+++E +R GV E+L +GPD NP+L+Y R++G+GQDGP +
Sbjct: 72 KSDEGPARVLDLVERADILVEGYRPGVAERLGVGPDACLARNPQLVYGRMTGWGQDGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G LS++G + PT P NL D+ GG L +G++ AL G G
Sbjct: 132 DRAGHDIAYIALTGTLSMIGRPDEPPTVPANLVGDYAGGSLYLVIGVLAALQHARSHGEG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TY T DG MAVG LE
Sbjct: 192 QVVDAAIVDGAAHLATMIHGMLAAGSWQDRRGANLLDGGCPFYGTYATSDGGHMAVGPLE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+ + LG+ + + ++ + RA +TE+F +T+AEW E+F TDACV PVL
Sbjct: 252 GQFYAEFVRLLGIADAFPDRWDLARWDELRATVTERFLTRTRAEWTEVFAGTDACVAPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREV 351
SL +A HPH R +F+ G PAPAPR S TP + + PA PG T V
Sbjct: 312 SLGEAPHHPHLAARSTFV-EHGGRTQPAPAPRFSATPVSVRT---GPALPGADTEAV 364
>gi|325003304|ref|ZP_08124416.1| predicted acyl-CoA transferase/carnitine dehydratase
[Pseudonocardia sp. P1]
Length = 366
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 197/337 (58%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPF---VQDTVGYGKKSLCIN 57
L G+ V+E AG+ P P MIL + GA V+RID+ G P D G++++ +
Sbjct: 8 LAGLKVIELAGIGPGPHAAMILGDLGADVVRIDRPSGGFSPGSGDAPDPTVRGRRTVTAD 67
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G + L ++DV+LE +R GV E+L +GPD NPRL+Y R++G+GQDGP
Sbjct: 68 LKDPAGRETVLRLVEKADVLLEGYRPGVTERLGVGPDDCRTRNPRLVYGRMTGWGQDGPM 127
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ ++G L +G P PP NL DFGGG ++ +G++ AL+E SG
Sbjct: 128 APRAGHDINYISMTGALHAIGRAGERPVPPLNLVGDFGGGSMLLVVGVLAALWEARASGE 187
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D MV+G + L W + NLLDG A FYDTY DG +MAVGAL
Sbjct: 188 GQVVDAAMVDGVSVLNQMFWGFLGQGAWTDEKDSNLLDGHAPFYDTYACADGGYMAVGAL 247
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFYAQLLAGL +T++EL G RA+ TE F K + EW +F+ TDAC TP
Sbjct: 248 EPQFYAQLLAGLELTDDELGHQYDRAGWPAMRARFTEVFASKPRDEWAAVFEGTDACTTP 307
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
VLS +A H RG+ + GV APAPR SR
Sbjct: 308 VLSFGEAAEDAHLAARGTIV-TADGVPQAAPAPRFSR 343
>gi|294816038|ref|ZP_06774681.1| Fatty acid-CoA racemase [Streptomyces clavuligerus ATCC 27064]
gi|326444380|ref|ZP_08219114.1| fatty acid-CoA racemase [Streptomyces clavuligerus ATCC 27064]
gi|294328637|gb|EFG10280.1| Fatty acid-CoA racemase [Streptomyces clavuligerus ATCC 27064]
Length = 394
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 214/363 (58%), Gaps = 13/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTV----GYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G F D K+S+ I+L
Sbjct: 12 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGFAIDPAFDLTNRNKRSVLIDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + L ++D+++E +R GV E+L +GP+ NPRL+Y R++G+GQ+GP +
Sbjct: 72 KAEDGPGQVLELVERADILIEGYRPGVAERLGVGPEAALARNPRLVYGRITGWGQEGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE-RSKSGR 177
AGHDI Y+ ++G L ++G + PT P NL D+ GG L G++ AL RS G
Sbjct: 132 DRAGHDIGYIAVTGTLGMIGRPDEAPTVPVNLVGDYAGGSLYLVTGVLAALHHVRSGGGA 191
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + + + W RG NLLDGG+ FY YET DG MAVGAL
Sbjct: 192 GQVVDAAIVDGAAHLATMIHGMRAAGGWRDRRGSNLLDGGSPFYGCYETSDGGHMAVGAL 251
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E +FY + + LG+ + E+E R + + F+ +T+AEW +F+ TDACV PV
Sbjct: 252 EQRFYDEFVRVLGIAGTVPARQEIERWDELRTAVADAFRTRTRAEWTALFEGTDACVAPV 311
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LS+++A HPH RG+F+ + G+ PAPAPR S TP + PA PG V R
Sbjct: 312 LSMAEAPRHPHLAARGTFV-DPGGISQPAPAPRFSGTPCAVRTP---PALPGADAAAVAR 367
Query: 354 HFG 356
+G
Sbjct: 368 DWG 370
>gi|377811200|ref|YP_005043640.1| L-carnitine dehydratase/bile acid-inducible protein [Burkholderia
sp. YI23]
gi|357940561|gb|AET94117.1| L-carnitine dehydratase/bile acid-inducible protein [Burkholderia
sp. YI23]
Length = 388
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 204/341 (59%), Gaps = 12/341 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH------GAQPFVQDTVGYGKKSLCI 56
L G+ V+E AG+ P P M L + GATVIR+D+ +P D +KS+ +
Sbjct: 11 LAGVKVVEIAGIGPGPLAAMFLADLGATVIRVDRKEPSGLGAPRPLQFDLGLRNRKSIRV 70
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK A + ++ L +D ++E FR GVME+L LGPDV NPRL+Y R++G+GQDGP
Sbjct: 71 DLKDADAVEMVMELVADADALIEGFRPGVMERLGLGPDVCLARNPRLVYGRVTGWGQDGP 130
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S +AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 131 LSQVAGHDLNYIAITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGVLEARGSG 190
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A + + + K RG NLLD GAHFY+ YE DGR+++VG
Sbjct: 191 KGQVVDAAMVDGVASIMTVTMGLHAAGMLGKARGTNLLDTGAHFYEVYECADGRYVSVGP 250
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVET-----GRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+ES+FY LL LG+ + + Q +++ + L +F+++T+ EW ++ +D C
Sbjct: 251 IESKFYRLLLEKLGLQDHPVLQKQMDRAQWPEAKQVLAARFRQRTRDEWTQLLGESDVCF 310
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
PVL +A HPH RG+ I + GV+ PAP PR SRTP
Sbjct: 311 APVLDFDEAPDHPHIKARGTLI-DVDGVMHPAPGPRFSRTP 350
>gi|291435839|ref|ZP_06575229.1| fatty acid-CoA racemase [Streptomyces ghanaensis ATCC 14672]
gi|291338734|gb|EFE65690.1| fatty acid-CoA racemase [Streptomyces ghanaensis ATCC 14672]
Length = 386
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 211/361 (58%), Gaps = 12/361 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 12 LAGVRVIELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLGIDPAYDVTNRNKRSVIVDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +L ++DV++E +R GV E+L +GP NPRL+Y R++G+GQ GP +
Sbjct: 72 KAPDGAARVLDLVERADVLVEGYRPGVAERLGVGPGDCHARNPRLVYGRMTGWGQQGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI YL +G L ++G +R P P NL D+ GG L +G++ AL +G G
Sbjct: 132 DRAGHDIAYLAPTGTLGMIGDPDRPPAVPANLLGDYAGGSLYLVVGVLAALHHARATGTG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+++L + + W RG NLLDGG +Y TYET DGR MAVGALE
Sbjct: 192 QVVDAAIVDGASHLSAMIHGMLAAGAWQDRRGANLLDGGCPYYGTYETADGRHMAVGALE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+ L LG+ + +V R ++ +F+ +T+ W +F+ +DACV PVL
Sbjct: 252 PRFYAEFLRLLGLEDRAAAHADVTRWPELREQVAARFRTRTRDAWTAVFEGSDACVAPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SL +A HPH RG+F + G+ PAPAPR S TP T + PA PG T +V R
Sbjct: 312 SLREAPHHPHLAARGTFT-DHGGITQPAPAPRFSATPATVRT---GPARPGADTDDVARD 367
Query: 355 F 355
+
Sbjct: 368 W 368
>gi|384566099|ref|ZP_10013203.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora glauca K62]
gi|384521953|gb|EIE99148.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora glauca K62]
Length = 364
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 201/338 (59%), Gaps = 11/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP-----FVQDTVGYGKKSLCIN 57
L + V+E AGL PAP M+L + GA V+RI++ G + D + G++++ +
Sbjct: 5 LNDLRVVELAGLGPAPHAAMLLADLGADVVRIERPGGNGPDLLGGLPDHLLRGRRTIVTD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G + + L ++DV++E FR GV E+L +GP+ + N RL+Y R++G+G+ GP
Sbjct: 65 LKTPEGRARVLELVERADVLIEGFRPGVAERLGVGPEDCHRRNARLVYGRVTGWGRSGPL 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
S AGHDINYL L+G L +G R+R P P NL DFGGG L GI+ AL+ER +SG
Sbjct: 125 SDRAGHDINYLSLTGALHAVGTRDR-PVAPLNLIGDFGGGSLFLLAGILAALWERERSGL 183
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D M +G L + + +W R NLLDGGA FYDTY DGR++AVGA+
Sbjct: 184 GQVVDATMTDGVGLLMHMIWTLHGSGVWSDERASNLLDGGAPFYDTYACSDGRWVAVGAI 243
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFY LL GL + EELP G RA++ F K + W E+F TDACVTP
Sbjct: 244 EPQFYRALLDGLDLAGEELPDQYDRAGWPVLRARIAGVFATKPRDHWAEVFTGTDACVTP 303
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
VLSL + HPHN R F R GV P P+P SRT
Sbjct: 304 VLSLEEVADHPHNRARQRFF-TRDGVRQPKPSPEFSRT 340
>gi|302522927|ref|ZP_07275269.1| fatty acid-CoA racemase [Streptomyces sp. SPB78]
gi|302431822|gb|EFL03638.1| fatty acid-CoA racemase [Streptomyces sp. SPB78]
Length = 386
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 212/352 (60%), Gaps = 18/352 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQPFVQDTVGYGKKSLCI 56
L G+ VLE AGL P PF M+L + GA V+R+D+ G P + D GK+S+ +
Sbjct: 13 LGGVRVLELAGLGPGPFAAMLLADLGADVVRVDRPERGGMFGMDPAL-DFTNRGKRSVEL 71
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G + + LA ++D+++E FR GV E+L +GP+ +NPRL+Y R++G+GQ+GP
Sbjct: 72 DLKTEEGAAAVLALAERADLLVEGFRPGVAERLGVGPEQALAANPRLVYGRVTGWGQEGP 131
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+ YL +G L+L G + PT P NL DF GG L +G++ AL ++G
Sbjct: 132 LAHRAGHDLTYLAPTGALALGGDPDAPPTFPANLLGDFAGGSLYLVVGLLAALRHAERTG 191
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+G+A+L + L W RG NLLDGG+ FY YET DG+ MAVGA
Sbjct: 192 EGQVVDAAIVDGAAHLTTLLHGLMAAGGWQDRRGSNLLDGGSPFYGCYETADGKHMAVGA 251
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
LE +FY + LG+ E + + + RA++ F+ +T+AEW ++F ++D CV P
Sbjct: 252 LEKRFYNEFTERLGIAETAPAREDFDHWDELRARIAAAFRTRTRAEWTKVFADSDGCVAP 311
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG 345
VLSL +A HPH R +F+P G PAPAPR S TP PAPG
Sbjct: 312 VLSLREAPHHPHLAVRNTFVPGPDGTPQPAPAPRFSATPA--------PAPG 355
>gi|254487277|ref|ZP_05100482.1| alpha-methylacyl-CoA racemase [Roseobacter sp. GAI101]
gi|214044146|gb|EEB84784.1| alpha-methylacyl-CoA racemase [Roseobacter sp. GAI101]
Length = 384
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 220/375 (58%), Gaps = 17/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-QPFVQ-----DTVGYGKKSLCI 56
L G+ ++EFAG+ P PF GM+L + GA VIRI++ A P Q D + G++S+ +
Sbjct: 10 LAGLRIIEFAGIGPGPFAGMMLADMGAEVIRIERPNAGSPTGQGAHELDFLARGRRSIAL 69
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
N+K + + L +D ++E FR GVME+L LGPDV NPRL+Y R++G+GQ+GP
Sbjct: 70 NMKAPGAVDLALRLVETADGLIEGFRPGVMERLGLGPDVCRARNPRLVYGRMTGWGQNGP 129
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S AGHD+NY+ LSG L G R P+ P NL DFGGGG+ A G+V L + +++G
Sbjct: 130 VSKTAGHDLNYIALSGALWASGEAGRAPSFPLNLLGDFGGGGMFLAFGMVTGLLKAARTG 189
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
G V+D +V+G+A L S + + LW R N LDGG +Y YE DG ++ +GA
Sbjct: 190 SGDVVDAAIVDGTAALMSMIYSRRAMGLWRDERASNALDGGVPWYGVYECADGGWVTIGA 249
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QF+A LL LG+T +E+ + G RA+LT FK + + W ++ +TDAC
Sbjct: 250 LEPQFWAVLLDRLGLTAQEM-GDRADRGTWPAMRARLTGVFKSQPRDHWVDLLQDTDACF 308
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A HPHN RG F GVV P PAPR T ++ + PAPG +R +
Sbjct: 309 APVLSPAEAPGHPHNQARGIF---SEGVVQPMPAPRF--TDASTPLPTTPPAPGADSRAI 363
Query: 352 LRHFGYSDANIEELI 366
L G + IE L
Sbjct: 364 LTDLGLAADEIEALF 378
>gi|433629941|ref|YP_007263569.1| Putative fatty-acid-CoA racemase Far [Mycobacterium canettii CIPT
140070010]
gi|432161534|emb|CCK58879.1| Putative fatty-acid-CoA racemase Far [Mycobacterium canettii CIPT
140070010]
Length = 359
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 209/337 (62%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVKVIELGGIGPGPHAGMVLADLGADVVRVRRPGGLTMPSEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +S
Sbjct: 67 TQP--QALLELAAKADVLLDCFRPGTCERLGIGPDDCASVNPRLIFARITGWGQDGPLAS 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G L+ G+ +R P PP NL ADFGGG ++ LGIV+AL+ER +SG GQ
Sbjct: 125 TAGHDINYLSQTGTLAAFGYADRPPMPPLNLVADFGGGSMLVLLGIVVALYERERSGVGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G + L + + R LLDGGA FY YET DG+++AVGA+E
Sbjct: 185 VVDAAMVDGVSVLAQMMWTMKGIGSLRDQRESFLLDGGAPFYRCYETSDGKYIAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LL+GLG++ ++P G ++ E+F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLSGLGLSAADVPTQLDVAGYPQMYDIFAERFASRTRDEWTRVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ S+A ++ H R + I GV APAPR SRTP
Sbjct: 305 AWSEAANNDHLKARSTVI-TAHGVQQAAPAPRFSRTP 340
>gi|320588832|gb|EFX01300.1| isopenicillin n-transferase [Grosmannia clavigera kw1407]
Length = 769
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/329 (46%), Positives = 201/329 (61%), Gaps = 32/329 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----------HGAQPFVQDTVGYGKK 52
L G+ VLE AGLAPAPF G+I + GA V+RID+ P D + K
Sbjct: 339 LAGLRVLELAGLAPAPFAGLIFADAGADVLRIDRALPVSSSASPSSPLPVPSDLLTRHKA 398
Query: 53 SLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYG 112
S+ ++LK A+G+++++ LA ++DV+++PFR GV+E+L LGPDVL N RLIYARLSG+
Sbjct: 399 SVAVDLKDARGIALVRTLARRADVLIDPFRPGVLERLGLGPDVLLADNRRLIYARLSGFR 458
Query: 113 QDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
+DG Y MAGHDINYL +SG+LSLLG + PTPP NL ADF GGGLM A G+++AL R
Sbjct: 459 RDGRYRHMAGHDINYLAVSGVLSLLGRADAKPTPPTNLLADFAGGGLMLAFGVLLALATR 518
Query: 173 SKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGR-- 230
S SGRGQV++ NMV+G+AYL ++ T L +PRG NLLD G +YDTY D
Sbjct: 519 SVSGRGQVVEANMVDGAAYLATFARFGLQTPLGCRPRGHNLLDSGCPYYDTYACADAPAN 578
Query: 231 ---FMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----------------RAKLTE 270
++AVGALE +F+ QLL GL P E RA LT
Sbjct: 579 PNGYVAVGALEPRFFDQLLRGLTADRPANPALEPLADIQAWKLRRLDPEQWPALRAALTA 638
Query: 271 KFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
F+ +A W +FD TDAC TPVL ++
Sbjct: 639 AFRRHPRAHWEGVFDGTDACCTPVLGFAE 667
>gi|226364531|ref|YP_002782313.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
gi|226243020|dbj|BAH53368.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
Length = 380
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 238/381 (62%), Gaps = 17/381 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-------AQPFVQDTVGYGKKSLC 55
L G+TV+E A LAPAPF MIL + GA VIR+++ G A V D G++S+
Sbjct: 6 LSGLTVVEMASLAPAPFGCMILADLGADVIRVERAGDGGSGLMAPSGVLDR---GRRSIA 62
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L+ +GL + L + +D+++E FR GV E+L +GPD NP +IY R++G+GQDG
Sbjct: 63 VDLRTPEGLDAVLRLVDGADILVEGFRPGVAERLGIGPDDCLSRNPGVIYGRMTGWGQDG 122
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ L+G L +G P PP NL DFGGGGLM +GI+ AL ER++S
Sbjct: 123 PLAPRAGHDINYIALAGALDPIGRAGERPVPPLNLLGDFGGGGLMLTMGILAALHERTRS 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQV+D +MV+G+A L +++ LW + RG+N+LDG A FYDTYE DG +AVG
Sbjct: 183 GRGQVVDASMVDGAALLTAFVHGMNAAGLWQEGRGQNVLDGAAAFYDTYECADGLHVAVG 242
Query: 236 ALESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E FY +LL LG++ E+LP Q++++ +A+L + F + + EW +F ++DACV
Sbjct: 243 CVEPHFYGELLDVLGLSGEDLPLQYDLDAAPELKAQLADVFATRPRDEWAALFADSDACV 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
+PVLS +A HPHN R +F+ G+ PAPAPR SRT + + P PG T +
Sbjct: 303 SPVLSPWEAHEHPHNKERETFV-EVGGIRQPAPAPRFSRT--PAPVPRPAPRPGQDTDAI 359
Query: 352 LRHFGYSDANIEELIREDVIE 372
L GY A IE L +E
Sbjct: 360 LARAGYDAAAIERLRSAGAVE 380
>gi|258571063|ref|XP_002544335.1| alpha-methylacyl-CoA racemase [Uncinocarpus reesii 1704]
gi|237904605|gb|EEP79006.1| alpha-methylacyl-CoA racemase [Uncinocarpus reesii 1704]
Length = 396
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/321 (44%), Positives = 209/321 (65%), Gaps = 23/321 (7%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQ----PFVQDTVGYGK 51
+ L+G+ V+E AGLAP PF G++L+++GA+V+R+D+ H P DT+ K
Sbjct: 6 LPLQGVRVVELAGLAPGPFAGLLLSDYGASVLRVDRPHPNAHSTSKPLPPPTTDTLTRHK 65
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSG 110
S+ ++LK + +V+ +L +DV+++PFR GV+EKL L P VL K NPRLI AR++G
Sbjct: 66 TSISLDLKASASKAVLLSLVRNADVLIDPFRPGVLEKLGLCPTTVLLKENPRLIIARMTG 125
Query: 111 YGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALF 170
+ +DG Y MAGHDINY+ +SG+L +LG P PP N+ DF GGG +C LGI++AL
Sbjct: 126 FRRDGKYKDMAGHDINYIAVSGVLGMLGRAGEAPYPPGNILGDFAGGGAICFLGILLALL 185
Query: 171 ERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-G 229
R +G+GQV++ NMV+GSAYL + ++ T +W++PRG N+LDGG +Y TYETKD G
Sbjct: 186 SRQTTGKGQVVNANMVDGSAYLATMPRLSRKTPMWNRPRGTNVLDGGCPYYGTYETKDAG 245
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEEL-----------PQHEVETGRAKLTEKFKEKTQA 278
+ A+G LE QF+ LL GL ++ ++ P + R L ++FKE+T+
Sbjct: 246 NYFAIGPLEPQFFEALLRGLELSATDIFPPNSNGRREDPANWPHM-RGVLEKRFKERTRK 304
Query: 279 EWCEIFDNTDACVTPVLSLSQ 299
EW +FD TDAC TPVL++ +
Sbjct: 305 EWEAVFDGTDACATPVLTMDE 325
>gi|443304180|ref|ZP_21033968.1| far [Mycobacterium sp. H4Y]
gi|442765744|gb|ELR83738.1| far [Mycobacterium sp. H4Y]
Length = 359
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 215/357 (60%), Gaps = 13/357 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E G+ P P GM+L + GA V+R+ + + +D + GK+ + +++
Sbjct: 6 LAGVRVIELGGIGPGPHAGMLLADLGADVVRVRRPSGGLEMPAEGRDLLHRGKRIVDLDV 65
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + LA ++DV+L+ FR G E+L +GPD +NPRLI+AR++G+GQDGP +
Sbjct: 66 KTQP--QALLELAAKADVLLDCFRPGTCERLGIGPDDCAAANPRLIFARITGWGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL +G LS LG+ +R P PP NL ADFGGG ++ A GI +AL+ER +SG+G
Sbjct: 124 RTAGHDINYLSQTGALSALGYADRPPIPPLNLVADFGGGSMLVAFGIAVALYERERSGKG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+G + L + + T R LLDGGA FY YET DG ++AVGA+E
Sbjct: 184 QVIDAAMVDGVSLLAQMMWTMKSTGALRDRRESFLLDGGAPFYGCYETADGGYVAVGAIE 243
Query: 239 SQFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+A LLAGLG++ E++P + R T++F +T+ EW F TDACVTPV
Sbjct: 244 PQFFAALLAGLGLSPEDVPGQLDKDSYPRMREIFTKRFASRTRDEWARTFAGTDACVTPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
L+ ++A + H R + I GV APAPR SRTP + E PA E+
Sbjct: 304 LTWTEAATDDHLRTRSTVI-TAHGVDQAAPAPRFSRTP--TGPVERPPAATTSLDEI 357
>gi|384104828|ref|ZP_10005765.1| fatty acid-CoA racemase [Rhodococcus imtechensis RKJ300]
gi|383837608|gb|EID77007.1| fatty acid-CoA racemase [Rhodococcus imtechensis RKJ300]
Length = 357
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 204/335 (60%), Gaps = 8/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
L GI VLE AG+ PAP ++L + GA V+R+ + + D G++ + NLK
Sbjct: 9 LAGIRVLELAGVGPAPHAALMLADLGADVVRVQRPDPSSTPAPDPTLRGRRIITANLKDP 68
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
L ++ LA ++D+++E FR GV E+L LGPD NP LIY R++G+GQDGP+++
Sbjct: 69 DDLDDVRALALKADILIEGFRPGVAERLGLGPDTFANVNPGLIYGRMTGWGQDGPWAAKP 128
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDIN++ +G+L+ +G P PP NL DFGGG + G++ AL ER++SGRGQV+
Sbjct: 129 GHDINFIAATGVLNAIGPAEGPPLPPLNLIGDFGGGSMFLIAGLLAALVERARSGRGQVV 188
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M++G+ L + + W RG N+LDGGA +YD Y T DG +MAVGA+E QF
Sbjct: 189 DAAMLDGTLTLAHSVWAMRAAGDWTDERGANVLDGGAPYYDCYRTADGGYMAVGAIEPQF 248
Query: 242 YAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVLSL 297
Y LL GL + EE P + + +L E F +++AEW +FD+ DACVTPVLS
Sbjct: 249 YQALLDGLAI--EEAPDRDDRSRWPELRELFATAFATRSRAEWETVFDSIDACVTPVLSF 306
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+ + P HR + P R GV+ P APRLSRTP
Sbjct: 307 DEVSGQPQVAHRQAIGP-RDGVLQPGAAPRLSRTP 340
>gi|91975501|ref|YP_568160.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris BisB5]
gi|91681957|gb|ABE38259.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris BisB5]
Length = 371
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 212/342 (61%), Gaps = 14/342 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI ++EFAG+ P PF M+L + GA VI + + G P + G+K + ++LK
Sbjct: 21 LSGIRIVEFAGIGPGPFGSMLLADMGAEVITLVRAGQTP--RGAAARGRKIVTVDLKDKD 78
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ + L + +D ++E +R GVME+L LGPDV+ NPRL+Y R++G+GQ GP + AG
Sbjct: 79 SVAGVLTLLDNADALIEGYRPGVMERLGLGPDVVLGRNPRLVYGRMTGWGQSGPLAQAAG 138
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G R P PP NL DFGGG L +G++ AL E SG+GQV+D
Sbjct: 139 HDINYISITGALAAIGPAER-PVPPLNLVGDFGGGSLYLVVGLLAALLEAKTSGKGQVVD 197
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L + W + R N+LDGGAHFY YE DG F+++G++E QFY
Sbjct: 198 AAMCDGAASLITMFFDMVAAGRWKESRESNMLDGGAHFYGVYECADGHFISIGSIEPQFY 257
Query: 243 AQLLAGLGMTEEELPQHEVETG-------RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
A L G+T+ PQ++ + + KLT FK KT+ EWC++ + TD C PVL
Sbjct: 258 ALLRELAGLTD---PQYDGQMDPKNWPALKQKLTALFKTKTRDEWCKLMEGTDVCFAPVL 314
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKI 337
++S+AT HPH V R FI + G PAPAPR SRTP ++++
Sbjct: 315 TMSEATQHPHMVAREVFI-KQGGHTQPAPAPRFSRTPSSARL 355
>gi|54027339|ref|YP_121581.1| fatty acid-CoA racemase [Nocardia farcinica IFM 10152]
gi|54018847|dbj|BAD60217.1| putative fatty acid-CoA racemase [Nocardia farcinica IFM 10152]
Length = 366
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 205/333 (61%), Gaps = 6/333 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-GKKSLCINLKKA 61
L GI V+E AG+ P P ++L + GA V+R+ + P V + + G+ + NLK
Sbjct: 13 LAGIRVVELAGIGPGPHAALLLADLGADVVRVQRPNLFPGVMERPQWRGRTIVEANLKDP 72
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ + L +++DV++E FR GV E++ LGP+ NPRL+Y R++G+GQ GP + A
Sbjct: 73 SDIEKVLGLIDKADVLIEGFRPGVTERMGLGPEETLARNPRLVYGRMTGWGQYGPLADRA 132
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G+L+ +G + P PP N+ DFGGG + GI+ AL ER SG+GQVI
Sbjct: 133 GHDINYISLTGVLNAIGRKGERPVPPLNMVGDFGGGSMFLVFGILAALVERQSSGKGQVI 192
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M++G+ L + + LW RG NLLD G FYDTYET DG++MAVGA+E QF
Sbjct: 193 DAAMIDGALALSHMIWGMRGMGLWSDERGTNLLDTGMAFYDTYETADGKYMAVGAIEPQF 252
Query: 242 YAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA+LL GL + E LP G+ +L EKFK KT+ EW IF+ TDAC TPVL+L
Sbjct: 253 YAELLKGLEIDPEGLPMQIDPNGQDQLRKLFAEKFKTKTRDEWAAIFEGTDACTTPVLTL 312
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
++AT + H R + GVV APAPR SR
Sbjct: 313 TEATENEHIAARNGLV-EIEGVVQHAPAPRFSR 344
>gi|421738474|ref|ZP_16176831.1| putative acyl-CoA transferase/carnitine dehydratase [Streptomyces
sp. SM8]
gi|406693122|gb|EKC96786.1| putative acyl-CoA transferase/carnitine dehydratase [Streptomyces
sp. SM8]
Length = 371
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 211/362 (58%), Gaps = 12/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 10 LHGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLGIDPALDLTNRNKRSVLVDL 69
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +L ++D+++E +R GV E+L +GPD NPRL+Y R++G+GQ+GP +
Sbjct: 70 KAEDGAARVLDLVERADILVEGYRPGVAERLGVGPDACLARNPRLVYGRMTGWGQEGPLA 129
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ ++G L L+G + P P NL D+ GG L G++ AL G G
Sbjct: 130 DRAGHDIGYIAVTGALGLVGEPDAPPAVPANLVGDYAGGSLYLVTGVLAALHHARAHGTG 189
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + +W R NLLDGGA FY Y T DG MAVGALE
Sbjct: 190 QVVDAAIVDGTAHLTTMIHAMFGAGVWQDRRRSNLLDGGAPFYGCYATADGGHMAVGALE 249
Query: 239 SQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+ LG+ EE Q ++ + R +T +F T+ EW E+F TDACV PVL
Sbjct: 250 PRFYAEFARVLGLPEETPDQFDLARWDELREAVTARFASCTREEWTELFAGTDACVAPVL 309
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SL++A SHPH R +F + G V PAPAPR S TP + PA PG T EV R
Sbjct: 310 SLAEAASHPHLAARETFTTHE-GRVQPAPAPRFSATPTAVRT---GPALPGADTAEVARD 365
Query: 355 FG 356
+G
Sbjct: 366 WG 367
>gi|312199265|ref|YP_004019326.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
gi|311230601|gb|ADP83456.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
Length = 407
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/387 (41%), Positives = 233/387 (60%), Gaps = 26/387 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRI----------DKHGAQPFVQ-----DTV 47
L G+ V+E AG P PF M+L + GA V+R+ D+ + ++ D V
Sbjct: 14 LAGVRVVELAGRGPGPFGVMVLADLGAEVVRVARVEDVSTGDDESATERALRGHRRHDLV 73
Query: 48 GYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYAR 107
G+ S+ ++LK G + L + +DV++E FR GV E+L LGPD+ NPRL+Y R
Sbjct: 74 TRGRPSVALDLKHPDGAAAALRLIDGADVVVEGFRPGVAERLGLGPDLCLDRNPRLVYTR 133
Query: 108 LSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVM 167
++G+GQDGPY+ GHDINY+ L+G L L + P PP NL D+GGGG++ +G++
Sbjct: 134 MTGFGQDGPYARSPGHDINYVALAGALEPLRRSGQPPAPPLNLLGDYGGGGMLLVVGVLA 193
Query: 168 ALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETK 227
AL ER+ SGRGQV+D MV+G A L + L + W G+N+L A FY+ YET
Sbjct: 194 ALVERAVSGRGQVVDAAMVDGVALLTTLLHGMRAEGSWADDPGQNILGLAAPFYNVYETA 253
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEE---ELPQHEVE-----TGRAKLTEKFKEKTQAE 279
DGR +AVGA E QFY++LLA +G+ +E EL + + + R +L + F+ +T E
Sbjct: 254 DGRHVAVGAGEHQFYSRLLALIGLDDEAEAELVRGQSDPATWPAARDQLADVFRTRTLDE 313
Query: 280 WCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
W ++ ++TD C TP+L+ ++A HPHNV RG+F+ + GVV PAPAPR SRTP S
Sbjct: 314 WSKLLESTDTCFTPILTPAEAAQHPHNVARGTFV-DVDGVVQPAPAPRFSRTP--SGPVS 370
Query: 340 HNPAPGVHTREVLRHFGYSDANIEELI 366
A G HTR+ L +G+SD I L+
Sbjct: 371 PPAAAGEHTRKALLAWGFSDTEIAGLL 397
>gi|254773862|ref|ZP_05215378.1| Far [Mycobacterium avium subsp. avium ATCC 25291]
Length = 359
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 206/336 (61%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 7 LAGVRVIELGGIGPGPHAGMVLADLGADVVRVRRPGVAAMPSEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ +LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQ GP +
Sbjct: 67 ARP--RALLDLAAKADVLLDCFRPGTCERLGIGPDDCAAVNPRLIFARITGWGQHGPLAQ 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G+LS LG +R P PP NL ADFGGG ++ LGI AL+ER +SGRGQ
Sbjct: 125 TAGHDINYLSQTGVLSALGHADRPPLPPLNLVADFGGGSMLVLLGITAALYERERSGRGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + T R LLDGGA FY YET DG+++AVGA+E
Sbjct: 185 VIDAAMVDGVSLLAQMMWTMKSTGALRDRRESFLLDGGAPFYGCYETADGKYVAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LL GLG++ EE+P + R T++F +T+ EW +F TDACVTPVL
Sbjct: 245 QFFAALLDGLGLSPEEVPGQLDRDSYPRMREVFTQRFAARTRDEWARVFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ S+A + H R + I GV APAPR S T
Sbjct: 305 TWSEAAASEHLRARSTVI-TAHGVDQAAPAPRFSHT 339
>gi|306796626|ref|ZP_07434928.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu006]
gi|308342960|gb|EFP31811.1| fatty-acid-CoA racemase far [Mycobacterium tuberculosis SUMu006]
gi|379027021|dbj|BAL64754.1| fatty-acid-CoA racemase [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
Length = 350
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 207/334 (61%), Gaps = 10/334 (2%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLKKAK 62
+ V+E G+ P P GM+L + GA V+R+ + G +D + GK+ + +++K
Sbjct: 1 MKVIELGGIGPGPHAGMVLADLGADVVRVRRPGGLTMPSEDRDLLHRGKRIVDLDVKTQP 60
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
M LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +S AG
Sbjct: 61 --QAMLELAAKADVLLDCFRPGTCERLGIGPDDCASVNPRLIFARITGWGQDGPLASTAG 118
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYL +G L+ G+ +R P PP NL ADFGGG ++ LGIV+AL+ER +SG GQV+D
Sbjct: 119 HDINYLSQTGALAAFGYADRPPMPPLNLVADFGGGSMLVLLGIVVALYERERSGVGQVVD 178
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + L + + R LLDGGA FY YET DG++MAVGA+E QF+
Sbjct: 179 AAMVDGVSVLAQMMWTMKGIGSLRDQRESFLLDGGAPFYRCYETSDGKYMAVGAIEPQFF 238
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A LL+GLG++ ++P G ++ E+F +T+ EW +F TDACVTPVL+ S
Sbjct: 239 AALLSGLGLSAADVPTQLDVAGYPQMYDIFAERFASRTRDEWTRVFAGTDACVTPVLAWS 298
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A ++ H R + I GV APAPR SRTP
Sbjct: 299 EAANNDHLKARSTVI-TAHGVQQAAPAPRFSRTP 331
>gi|383648243|ref|ZP_09958649.1| fatty acid-CoA racemase [Streptomyces chartreusis NRRL 12338]
Length = 367
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 213/358 (59%), Gaps = 12/358 (3%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINLKKA 61
+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++LK
Sbjct: 1 MRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLAIDPAYDVTNRNKRSVVVDLKSP 60
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G + + +LA ++D+++E +R GV E+L +GP+ NP L+Y R++G+GQDGP + A
Sbjct: 61 DGPARVLDLAARADILVEGYRPGVAERLGVGPEPCHARNPSLVYGRMTGWGQDGPLADRA 120
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDI Y+ +G L ++G + P P NL D+ GG L +G++ AL +G GQV+
Sbjct: 121 GHDIAYIAPTGTLGMIGRPDEPPAVPANLLGDYAGGSLYLVVGVLAALHHARATGTGQVV 180
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D +V+G ++L + + W RG NLLDGG +Y TYET DGR++AVGALE +F
Sbjct: 181 DAAIVDGVSHLATMIHGMLAAGGWQDRRGVNLLDGGCPYYGTYETADGRYIAVGALEPRF 240
Query: 242 YAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
Y + LA LG+ ++ + +V R ++ +FK +T+ EW +FD TDACV PVLSL
Sbjct: 241 YEEFLALLGIDDQAAARKDVTRWGELRERVAARFKSRTRDEWTAVFDGTDACVAPVLSLR 300
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRHF 355
+A HPH RG+F + G+ PAPAPR S TP + + PA PG T +V R +
Sbjct: 301 EAPHHPHLAARGTFT-DHGGITQPAPAPRFSATPTSVRT---GPARPGADTADVARDW 354
>gi|379711389|ref|YP_005266594.1| fatty acid-CoA racemase [Nocardia cyriacigeorgica GUH-2]
gi|374848888|emb|CCF65964.1| fatty acid-CoA racemase [Nocardia cyriacigeorgica GUH-2]
Length = 364
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 205/333 (61%), Gaps = 6/333 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-GKKSLCINLKKA 61
L GI V+E AG+ P P ++L + GA V+R+ + G P D G+ + NLK
Sbjct: 11 LAGIRVIELAGIGPGPHAALLLADLGADVVRVQRAGQLPGGFDRPQLRGRTIVEANLKDP 70
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ + L +++DV++E FR GV E++ LGPD + NPRL+Y R++G+GQ GP + A
Sbjct: 71 ADVEKVLGLLDKADVLIEGFRPGVTERMGLGPDEVLARNPRLVYGRMTGWGQFGPMADRA 130
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G+L +G + P PP N+ DFGGG + GI+ AL ER SG+GQVI
Sbjct: 131 GHDINYISLTGVLHAIGRKGERPVPPLNMVGDFGGGSMFLVFGILAALVERQTSGKGQVI 190
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+G+ L + + + W + RG NLLD G FYDTYET DG++MAVGA+E QF
Sbjct: 191 DAAMVDGALALSHMIWGMRGSGAWSEERGVNLLDTGMSFYDTYETADGKYMAVGAIEPQF 250
Query: 242 YAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YAQLLAGLG+ E LP G+ L E+F+ KT+ EW EIF TDACVTPVL+
Sbjct: 251 YAQLLAGLGIDPEGLPYQIDPAGQDTLKELFAERFRTKTRDEWTEIFIGTDACVTPVLTF 310
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
S+A + H R + + + + APAPR SR
Sbjct: 311 SEAAENDHIKAREALV-DLENITQHAPAPRFSR 342
>gi|302537928|ref|ZP_07290270.1| fatty acid-CoA racemase [Streptomyces sp. C]
gi|302446823|gb|EFL18639.1| fatty acid-CoA racemase [Streptomyces sp. C]
Length = 389
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 210/362 (58%), Gaps = 11/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 22 LAGVRVVELAGIGPGPFAAMVLADLGADVVRVDRPGGGGLAIDPAHDVTNRNKRSVLVDL 81
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A+G +++ +L ++DV++E FR GV E+L +GPD NP+L+Y R++G+GQ+GP +
Sbjct: 82 KSAEGPALVLDLVQRADVLIEGFRPGVAERLGVGPDDCLARNPKLVYGRMTGWGQEGPLA 141
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE-RSKSGR 177
AGHDI Y+ ++G L ++G P P NL D+ GG L +GI+ AL R G
Sbjct: 142 HTAGHDIAYIAVTGALGMIGNPGEPPAVPANLVGDYAGGSLYLVIGILAALHHARGPEGA 201
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + + W RG NLLDGG FY TYET DG++MAVGAL
Sbjct: 202 GQVVDAAIVDGTAHLTAMIHGMVAAGGWQDRRGANLLDGGCPFYGTYETSDGQYMAVGAL 261
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E QFY LG+ + + ++ R + +FK +T+ EW +F+ TDACV PV
Sbjct: 262 EQQFYDTFTELLGIADRAPARKDLARWGELREAVAARFKSRTREEWTAVFEGTDACVAPV 321
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL +A HPH R +F G + PAPAPR S TP +++ PG T V
Sbjct: 322 LSLREAPHHPHLAARATFT-EFGGTLQPAPAPRFSATP--TRVASGPAMPGADTGSVAAD 378
Query: 355 FG 356
+G
Sbjct: 379 WG 380
>gi|392564140|gb|EIW57318.1| CoA-transferase family III [Trametes versicolor FP-101664 SS1]
Length = 406
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/401 (41%), Positives = 227/401 (56%), Gaps = 41/401 (10%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLK 59
+ L GI V+EFAGLAP P GMIL +FGA VIRID+ GA D +G GK+S+ ++ K
Sbjct: 10 LPLSGIKVVEFAGLAPGPMAGMILADFGADVIRIDRPGAATAPTPDVLGRGKRSIAVDPK 69
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCK----SNPRLIYARLSGYGQDG 115
G V++ L Q+DV+++PFR GV+E+L LGP+V +N RLIYARL G+ + G
Sbjct: 70 TRSGYGVVRKLVEQADVLIDPFRPGVLERLGLGPEVFLDESKGTNARLIYARLVGFPRTG 129
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P+ MAGHD+NYL LSG+LS+L P P N+ ADF GGG+MCALGI++A+ ER+KS
Sbjct: 130 PHKDMAGHDLNYLALSGVLSMLPGAGM-PEFPLNILADFAGGGVMCALGILLAIVERTKS 188
Query: 176 GRGQVIDCNMVEGSAYLGSW--LTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
GRGQ+++ +MV G YL S+ L + L+ RG LLDGGA FY+ Y DGR+M+
Sbjct: 189 GRGQIVNTDMVSGVRYLASFPLLLAQLRSPLFGPGRGNGLLDGGAPFYNVYTCADGRWMS 248
Query: 234 VGALESQFYAQLLAGL------------GMTEEELPQHEVETG---RAKLTEKFKEKTQA 278
VG LE QF+ L G E QH+ ++ + + F +
Sbjct: 249 VGCLEPQFFKAFLKRFLGALPPGFALEDGWRPSETDQHDTDSWPRMKTFMERGFALHPRD 308
Query: 279 EWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
W ++FD +DAC PVLS +A + + G P+P P+L RTP + +
Sbjct: 309 YWGKVFDASDACAVPVLSADEAAALAAGS-------SSHGGAVPSPHPKLERTPVDAPL- 360
Query: 339 EHNPAP-------GVHTREVLRHFGYSDANIEELIREDVIE 372
PAP G HT E+LR G D E L R +E
Sbjct: 361 ---PAPADAIIPRGAHTEEILRELGLDDGAREALRRLGALE 398
>gi|296169610|ref|ZP_06851230.1| fatty-acid-CoA racemase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895876|gb|EFG75571.1| fatty-acid-CoA racemase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 359
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 210/353 (59%), Gaps = 19/353 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA---QPFVQDTVGYGKKSLCINLK 59
L G+ V+E G+ P P GM+L + GA V+R+ + G P +D + GK+ + +++K
Sbjct: 7 LAGVKVIELGGIGPGPHAGMMLADLGADVVRVRRPGGLVMPPEDRDLLHRGKRIVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ LA ++DV+L+ FR G E+L +GPD NPRLI+AR++G+GQDGP +
Sbjct: 67 TQP--QALLGLAARADVLLDCFRPGTCERLGIGPDECAAVNPRLIFARITGWGQDGPLAR 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G LS LG+ +R P PP NL ADFGGG ++ LGIV AL+ER +SG GQ
Sbjct: 125 TAGHDINYLSQTGALSALGYADRPPMPPLNLVADFGGGSMLVLLGIVAALYERERSGAGQ 184
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G + L + + T R LLDGGA FY YET DG++MAVGA+E
Sbjct: 185 VIDAAMVDGVSLLAQMMWTMKSTGALRDRRESFLLDGGAPFYRCYETADGKYMAVGAIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A LL GLG++ E+P ++ E +F +T+ EW F TDACVTPVL
Sbjct: 245 QFFAALLTGLGLSAGEVPGQLDVASYPRMYEVFAQRFASRTRDEWTTTFAGTDACVTPVL 304
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP---------GTSKITE 339
+ ++A + H R + + GV AP PR SRTP TS ITE
Sbjct: 305 TWTEAAADEHLRARSTVV-TAHGVDQAAPGPRFSRTPAAPVGRPPAATSPITE 356
>gi|319949342|ref|ZP_08023414.1| L-carnitine dehydratase/bile acid-inducible protein F [Dietzia
cinnamea P4]
gi|319436993|gb|EFV92041.1| L-carnitine dehydratase/bile acid-inducible protein F [Dietzia
cinnamea P4]
Length = 365
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 207/339 (61%), Gaps = 13/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY----GKKSLCINL 58
L GI V+E G+ P P M+L + GA V+ + + G D + G+ + +L
Sbjct: 9 LAGIRVVELNGIGPGPHACMMLADLGADVVTVMRPGELARSVDGWAHITRRGRTVVEADL 68
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +GL+ ++ L ++DV++E FR GV E++ LGPD + NPRL+YAR++G+GQ GP +
Sbjct: 69 KSDEGLAQVRTLIGKADVLVEGFRPGVTERMGLGPDECLELNPRLVYARMTGWGQHGPLA 128
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+NY+ L+G L+ +G + P PP NL DFGGG + GI+ A+ ER+ SG+G
Sbjct: 129 HTAGHDLNYISLTGHLNAIGRKGERPVPPLNLVGDFGGGSMFLIQGILAAIIERATSGKG 188
Query: 179 QVIDCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
QVID M +G++ LG W R + W G N+LD G FYD YE DG++MAVG
Sbjct: 189 QVIDAAMTDGASVLGQFQWAMRARGQ--WSDVAGTNMLDTGYPFYDVYECSDGKYMAVGC 246
Query: 237 LESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE QFYA+ LG+ E +P Q +++ R + KF EKT+ EW E+F TDAC T
Sbjct: 247 LEPQFYAEFARLLGVDGEGMPGQFDMDRWDELRELIAGKFAEKTRDEWAEVFYGTDACTT 306
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL+ ++A HPHN R +F+ AG V PAPAPR SRT
Sbjct: 307 PVLTYTEALDHPHNAARETFV-EVAGDVGPAPAPRFSRT 344
>gi|239992076|ref|ZP_04712740.1| putative fatty acid-CoA racemase [Streptomyces roseosporus NRRL
11379]
Length = 379
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 212/357 (59%), Gaps = 12/357 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 12 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLGIDPAYDLTNRNKRSVVLDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + +L ++D+++E +R GV E+L +GP+ NP+L+Y R++G+GQDGP +
Sbjct: 72 KSDEGPARVLDLVERADILVEGYRPGVAERLGVGPEACLARNPQLVYGRMTGWGQDGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G LS++G + PT P NL D+ GG L +G++ AL G G
Sbjct: 132 ERAGHDIAYIALTGTLSMIGGPDEPPTVPANLVGDYAGGSLYLVVGVLAALQHARAHGEG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TY T DG MAVG LE
Sbjct: 192 QVVDAAIVDGAAHLATMIHGMLAAGSWQDRRGANLLDGGCPFYGTYATSDGGHMAVGPLE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+ LG+ + + ++ + RA +TE+F +T+AEW E+F TDACV PVL
Sbjct: 252 GQFYAEFARLLGIADAFPDRWDLARWDELRAAVTERFLTRTRAEWTEVFAGTDACVAPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREV 351
SL++A HPH R +F+ G PAPAPR S TP + + PA PG T V
Sbjct: 312 SLTEAPHHPHLAARSTFV-EHGGRTQPAPAPRFSATPVSVRT---GPALPGADTEAV 364
>gi|393720758|ref|ZP_10340685.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
echinoides ATCC 14820]
Length = 367
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/364 (44%), Positives = 222/364 (60%), Gaps = 12/364 (3%)
Query: 8 VLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-----VQDTVGYGKKSLCINLKKAK 62
++EFAGL P PF M+L + GA V+RID+ + F D + G+ S+ ++LK
Sbjct: 1 MVEFAGLGPTPFGAMVLADLGAEVVRIDRRRTETFGGGDDRADFLNRGRPSVVVDLKSDP 60
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G ++ LA+++DV++E FR GVME+L LGPD L +NPRLIYAR++G+GQ GP + AG
Sbjct: 61 GRALALELASRADVLIEGFRPGVMERLMLGPDPLLAANPRLIYARMTGWGQTGPMTHKAG 120
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYL ++G L L+G + P PP N A+FGGGG++ +G++ AL ERS SGRGQ++D
Sbjct: 121 HDINYLSMTGALDLIGPFDGPPVPPINYVANFGGGGMLLVVGVLSALLERSVSGRGQIVD 180
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G++ L + + W RG NLLDG A+FY Y D +F+AVGALE QF+
Sbjct: 181 AAMVDGASLLATQIFAWTAMGRWHPGRGGNLLDGSAYFYRCYRAADDKFVAVGALEPQFH 240
Query: 243 AQLLAGLGMTEEELPQHE----VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A+L+ GLG+ + H T A+L F +T+ W E F DAC++PVLS
Sbjct: 241 AELIRGLGLDPADFGGHLDPSCWATRAAQLEAIFATRTRDGWIEHFAPFDACLSPVLSPQ 300
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYS 358
+AT HP NV RG + +GV+ PAPAPR RTP T P G R LR +G
Sbjct: 301 EATEHPANVTRGVHV-AVSGVLQPAPAPRFDRTPPTLPTAPVEPGEGGEDR--LRAWGID 357
Query: 359 DANI 362
A+
Sbjct: 358 PAHF 361
>gi|154285446|ref|XP_001543518.1| alpha-methylacyl-CoA racemase [Ajellomyces capsulatus NAm1]
gi|150407159|gb|EDN02700.1| alpha-methylacyl-CoA racemase [Ajellomyces capsulatus NAm1]
Length = 398
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/314 (48%), Positives = 208/314 (66%), Gaps = 22/314 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----------PFVQDTVGYGKK 52
LK I VLE AGLAPAPF G++L ++GA+V+RID+ Q P D++ K
Sbjct: 9 LKDIRVLELAGLAPAPFAGLLLADYGASVLRIDRPHPQAHSNHPGILPPETSDSLTRHKT 68
Query: 53 SLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGY 111
S+ I+LK LS++ +L + +D++++PFR GV+E+L L P DVL K NPRLI AR++G+
Sbjct: 69 SISIDLKSPASLSLLLSLISHADILIDPFRPGVLERLGLSPTDVLLKRNPRLIVARMTGF 128
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
+DG Y MAGHDINY+ +SG+L+LLG P PP N+ DF GGG MC LGI++AL
Sbjct: 129 RRDGKYKDMAGHDINYIAVSGVLALLGRAGERPYPPGNIVGDFAGGGAMCFLGILLALLS 188
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GR 230
R ++G+GQV++ NMV+GSAYL ++ Q +W PRG+N+LDGG +YD YETKD G+
Sbjct: 189 RHRTGKGQVVEANMVDGSAYLATFPRLLQKRPMWGSPRGQNVLDGGCPYYDIYETKDAGK 248
Query: 231 FMAVGALESQFYAQLLAGLGMTEEE-LP------QHEVETG---RAKLTEKFKEKTQAEW 280
+ AVGALE +F+A LL GL + E+ LP + + T R T +FKE+ + EW
Sbjct: 249 YFAVGALEPEFFAALLKGLSLKLEDILPPGSSGLREDPSTWPYMRDVFTRRFKERARREW 308
Query: 281 CEIFDNTDACVTPV 294
IFD TDAC TPV
Sbjct: 309 ESIFDGTDACATPV 322
>gi|296270062|ref|YP_003652694.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermobispora bispora DSM 43833]
gi|296092849|gb|ADG88801.1| L-carnitine dehydratase/bile acid-inducible protein F
[Thermobispora bispora DSM 43833]
Length = 363
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/373 (41%), Positives = 217/373 (58%), Gaps = 25/373 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF---VQDTVGYGKKSLCINLK 59
L G V+E AG+ P P MIL + GA V+R+++ GA ++D G++++ ++LK
Sbjct: 5 LTGTRVVELAGIGPGPHAAMILADLGADVVRVERPGAAGIPGAMRDPATRGRRTVVVDLK 64
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ +G + + +L ++DV+LE FR GV E+L LGP+ N RL+YAR++G+GQ GP +
Sbjct: 65 QPEGKAKVLDLIARADVLLEGFRPGVTERLGLGPEECTARNKRLVYARVTGWGQTGPLAQ 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G L +G R P PP NL ADFGGG ++ +GI+ AL ER +SG GQ
Sbjct: 125 RAGHDINYISLTGALHAIGEAER-PIPPLNLVADFGGGSMLAVVGILAALLERERSGEGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G + L LW R NLLDGGA +Y TY DG F+AVG +E
Sbjct: 184 VVDIAMVDGVSSLMQMAWGMYSAGLWRDRRASNLLDGGAPYYRTYRCADGGFVAVGCIEP 243
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+++ LG+ LP + KL E +F E + W E+F ++DACVTPVL
Sbjct: 244 QFYAEMVEKLGLDLATLPDRNDPSQWPKLHEIFERRFGEHPRDHWAELFADSDACVTPVL 303
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
SL++ HPH RGS + GV APR SRT G NP
Sbjct: 304 SLAEVPRHPHIAARGSVV-TVDGVTQAGVAPRFSRTAGGGV----NP------------I 346
Query: 356 GYSDANIEELIRE 368
G + ++I+E++RE
Sbjct: 347 GQTASDIDEILRE 359
>gi|329937084|ref|ZP_08286713.1| fatty acid-CoA racemase [Streptomyces griseoaurantiacus M045]
gi|329303691|gb|EGG47576.1| fatty acid-CoA racemase [Streptomyces griseoaurantiacus M045]
Length = 394
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 214/373 (57%), Gaps = 15/373 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ PAPF M+L + GA V+R+D+ G D GK+S+ ++L
Sbjct: 17 LTGVRVVELAGIGPAPFAAMLLADLGADVVRVDRPGGPGLGIDPALDVTNRGKRSVVLDL 76
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + +LA ++D++LE +R GV E+L +GP NPRL+Y R++G+GQ+GP +
Sbjct: 77 KSHEGPARVLDLAARADILLEGYRPGVAERLGVGPADCHARNPRLVYGRMTGWGQEGPLA 136
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+ YL +G L + G R P P NL D+ GG L +G + AL +G G
Sbjct: 137 DRAGHDLAYLARTGALGMTGEPGRPPVAPANLLGDYAGGSLYLVVGCLAALHHARATGTG 196
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+ +L + L W RG NLLDGG FY TYET DGR+MAVGALE
Sbjct: 197 QVVDAAIVDGAVHLTAMLHGMLAAGAWQDLRGANLLDGGCPFYGTYETSDGRYMAVGALE 256
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+ LG++ P+ + R + +F+ +T+ EW E+F +DACV PVL
Sbjct: 257 ERFYAEFTDLLGVSRPLPPREDPARWPELRTAVAARFRTRTREEWTEVFAGSDACVAPVL 316
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
SL +A PH RG+F + G+ PAPAPR S TP + + PG T V R
Sbjct: 317 SLREAPKDPHLAARGTFT-DHGGLTQPAPAPRFSATP--TAVRSGPALPGADTAAVAR-- 371
Query: 356 GYSDANIEELIRE 368
D N+ L+ +
Sbjct: 372 ---DWNLPHLVTD 381
>gi|357409925|ref|YP_004921661.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
flavogriseus ATCC 33331]
gi|320007294|gb|ADW02144.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
flavogriseus ATCC 33331]
Length = 383
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 212/358 (59%), Gaps = 13/358 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 12 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGSVIGIEPAFDLTNRNKRSVLVDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + +L ++DV++E +R GV E+L +GPD + NP L+Y R++G+GQDGP +
Sbjct: 72 KAEGGADRVLDLVERADVLIEGYRPGVAERLGVGPDACLERNPLLVYGRMTGWGQDGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL-FERSKSGR 177
AGHDI Y+ L+G LS++G PT P NL D+ GG L +G++ AL R+ G
Sbjct: 132 DRAGHDIGYIALTGTLSMIGRSGEPPTVPANLVGDYAGGSLYLVVGVLAALQHARTPDGA 191
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + + W RG NLLDG FY +YET DG +MAVG L
Sbjct: 192 GQVVDAAIVDGAAHLATMIHGMLAAGSWQDRRGSNLLDGSCPFYGSYETSDGLYMAVGPL 251
Query: 238 ESQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E +FY + LG+ +E +++ E RA + ++F+ + +AEW E+F+ TDACV PV
Sbjct: 252 EPRFYEEFAELLGLGDEAPDRNDFGRWEELRALIADRFRARPRAEWTEVFEGTDACVAPV 311
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREV 351
LSL +A HPH R +F+ G+ PAPAPR S TP + + PA PG T V
Sbjct: 312 LSLREAPRHPHLSARSTFV-EHGGLTQPAPAPRFSATPTSVR---SGPALPGADTEAV 365
>gi|291449064|ref|ZP_06588454.1| fatty acid-CoA racemase [Streptomyces roseosporus NRRL 15998]
gi|291352011|gb|EFE78915.1| fatty acid-CoA racemase [Streptomyces roseosporus NRRL 15998]
Length = 392
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 212/357 (59%), Gaps = 12/357 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 25 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLGIDPAYDLTNRNKRSVVLDL 84
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + +L ++D+++E +R GV E+L +GP+ NP+L+Y R++G+GQDGP +
Sbjct: 85 KSDEGPARVLDLVERADILVEGYRPGVAERLGVGPEACLARNPQLVYGRMTGWGQDGPLA 144
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G LS++G + PT P NL D+ GG L +G++ AL G G
Sbjct: 145 ERAGHDIAYIALTGTLSMIGGPDEPPTVPANLVGDYAGGSLYLVVGVLAALQHARAHGEG 204
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TY T DG MAVG LE
Sbjct: 205 QVVDAAIVDGAAHLATMIHGMLAAGSWQDRRGANLLDGGCPFYGTYATSDGGHMAVGPLE 264
Query: 239 SQFYAQLLAGLGMTEEELPQHEV---ETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+ LG+ + + ++ + RA +TE+F +T+AEW E+F TDACV PVL
Sbjct: 265 GQFYAEFARLLGIADAFPDRWDLARWDELRAAVTERFLTRTRAEWTEVFAGTDACVAPVL 324
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREV 351
SL++A HPH R +F+ G PAPAPR S TP + + PA PG T V
Sbjct: 325 SLTEAPHHPHLAARSTFV-EHGGRTQPAPAPRFSATPVSVRT---GPALPGADTEAV 377
>gi|375140688|ref|YP_005001337.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
rhodesiae NBB3]
gi|359821309|gb|AEV74122.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
rhodesiae NBB3]
Length = 367
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 216/368 (58%), Gaps = 21/368 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E A + P P MIL + GA V+RID+ G + ++T ++S+ +L
Sbjct: 5 LHGLRVIELASIGPGPHAAMILGDLGADVVRIDRPGKLGGIPSSRRETALRNRRSVTADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ L ++DV++E R GV E+L LGP+ K N RL+Y R++G+GQ GP
Sbjct: 65 KSDEGRELVLKLVAKADVLIEGLRPGVTERLGLGPEDCAKVNERLVYGRMTGWGQTGPRR 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G+L +G P PP NL DFGGG + +GI+ AL+ER SG+G
Sbjct: 125 LQAGHDINYISLNGVLHSIGRAGERPVPPLNLTGDFGGGSMFLLVGILSALWERQTSGKG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+GS+ L + + +W RG N+LDGGA +YDTY DG+ +A+GA+E
Sbjct: 185 QVVDAAMVDGSSVLAQMIWGFRQDGMWSDERGVNMLDGGAPYYDTYTCADGKHIAIGAIE 244
Query: 239 SQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+ + GLG+ +LP Q+++ RA +TE K + W ++F +DACVTPV
Sbjct: 245 PQFYAEAIKGLGLDGADLPDQNDMSRWPELRAAITEAVAAKDRDHWTKVFAGSDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRA---GVVAPAPAPRLSRTPGTSKITEHNPAP----GVH 347
LS + S PH R +F + + G + P PAPR SR+ T+ P P G
Sbjct: 305 LSFGEVESEPHITERDTFYRDDSAPGGYLQPMPAPRFSRSATTT------PTPPGQAGAD 358
Query: 348 TREVLRHF 355
T VLR +
Sbjct: 359 TEAVLRDW 366
>gi|111022026|ref|YP_704998.1| alpha-methylacyl-CoA racemase [Rhodococcus jostii RHA1]
gi|110821556|gb|ABG96840.1| probable alpha-methylacyl-CoA racemase [Rhodococcus jostii RHA1]
Length = 380
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 235/381 (61%), Gaps = 17/381 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-------AQPFVQDTVGYGKKSLC 55
L G+TV+E A LAPAPF MIL + GA VIR+++ G A V D G++S+
Sbjct: 6 LSGLTVVEIASLAPAPFGCMILADLGADVIRVERAGDGGSGLMAPSGVLDR---GRRSIA 62
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+NL+ +GL + L +D+++E FR GV E+L +GPD NP LIY R++G+GQDG
Sbjct: 63 VNLRTPEGLEAVLTLVEAADILVEGFRPGVAERLGIGPDDCLSRNPGLIYGRMTGWGQDG 122
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ L+G L +G P PP NL DFGGGGLM +GI+ AL ERS+S
Sbjct: 123 PLAPRAGHDINYIALAGALEPIGRAGERPVPPLNLLGDFGGGGLMLTMGILAALHERSRS 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQV+D +MV+G+A L +++ LW + R N+LDG A FYDTYE DG +AVG
Sbjct: 183 GRGQVVDASMVDGAALLTAFVHGMNAAGLWQEGRERNVLDGAAAFYDTYECADGLHVAVG 242
Query: 236 ALESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E FY +LL LG++ E+LP Q++++ + +L E F + + +W +F ++DACV
Sbjct: 243 CVEPHFYGELLDVLGLSGEDLPLQYDLDAAPELKKRLAEVFATRPRDDWAALFADSDACV 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
+PVLS +A HPHN R +F+ G+ PAPAPR SRT + + P PG T +
Sbjct: 303 SPVLSPWEAHEHPHNKERETFV-EVGGIRQPAPAPRFSRT--PAPVPRPAPRPGQDTDAI 359
Query: 352 LRHFGYSDANIEELIREDVIE 372
L GY + IE+L +E
Sbjct: 360 LAQAGYDPSRIEQLRSAGAVE 380
>gi|318060516|ref|ZP_07979239.1| putative fatty acid-CoA racemase [Streptomyces sp. SA3_actG]
Length = 371
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 210/349 (60%), Gaps = 18/349 (5%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQPFVQDTVGYGKKSLCINLK 59
+ VLE AGL P PF M+L + GA V+R+D+ G P V D GK+S+ ++LK
Sbjct: 1 MRVLELAGLGPGPFAAMLLADLGADVVRVDRPERGGMFGMDP-VLDFTNRGKRSVELDLK 59
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G + + LA ++D+++E FR GV E+L +GP+ +NPRL+Y R++G+GQ+GP +
Sbjct: 60 TEEGAAAVLALAERADLLVEGFRPGVAERLGVGPEQALAANPRLVYGRVTGWGQEGPLAH 119
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+ YL +G L+L G + PT P NL DF GG L +G++ AL ++G GQ
Sbjct: 120 RAGHDLTYLAPTGALALGGDPDAPPTFPANLLGDFAGGSLYLVVGLLAALRHAERTGEGQ 179
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+G+A+L + L W RG NLLDGG+ FY YET DG+ MAVGALE
Sbjct: 180 VVDAAIVDGAAHLTTLLHGLMAAGGWQDRRGSNLLDGGSPFYGCYETADGKHMAVGALEK 239
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
+FY + LG+ E + + + RA++ F+ +T+AEW ++F ++D CV PVLS
Sbjct: 240 RFYNEFTERLGIAETAPAREDFDHWDELRARIAAAFRTRTRAEWTKVFADSDGCVAPVLS 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG 345
L +A HPH R +F+P G PAPAPR S TP PAPG
Sbjct: 300 LREAPHHPHLAVRNTFVPGPDGTPQPAPAPRFSATPA--------PAPG 340
>gi|386843706|ref|YP_006248764.1| fatty acid-CoA racemase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374104007|gb|AEY92891.1| fatty acid-CoA racemase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796998|gb|AGF67047.1| fatty acid-CoA racemase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 378
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 214/360 (59%), Gaps = 14/360 (3%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD----TVGYGKKSLCINLKKA 61
+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++LK
Sbjct: 1 MRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLAIDPAFDVTNRNKRSIVVDLKAP 60
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G + + +LA ++D+++E +R GV E+L +GP+ NPRL+Y R++G+GQ GP + A
Sbjct: 61 DGPARVLDLAERADILIEGYRPGVAERLGIGPEDCHARNPRLVYGRMTGWGQAGPLAQRA 120
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDI Y+ L+G L ++G + P P NL D+ GG L +G++ AL +G GQV+
Sbjct: 121 GHDIAYIALTGTLGMIGRPDEPPAVPANLLGDYAGGSLYLVVGVLAALHHARATGTGQVV 180
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D +V+G+A+L + + W R NLLDGG +Y TYET DG +MAVGALE +F
Sbjct: 181 DAAIVDGTAHLSAMIHGMLAAGGWQDRRAANLLDGGCPYYGTYETADGGYMAVGALEGKF 240
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA+ L LG+ ++ P + T R ++ FK +++AEW +F +TDACV PVLSL
Sbjct: 241 YAEFLRLLGL-DDLAPARKDWTRWDGLRERIAAAFKSRSRAEWTAVFADTDACVAPVLSL 299
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRHFG 356
+A +HPH RG+F + G+ PAPAPR S TP + PA PG T EV R +G
Sbjct: 300 REAPAHPHLAARGTFT-DHGGITQPAPAPRFSATPTAVRT---GPARPGADTAEVARDWG 355
>gi|289767704|ref|ZP_06527082.1| racemase [Streptomyces lividans TK24]
gi|289697903|gb|EFD65332.1| racemase [Streptomyces lividans TK24]
Length = 398
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 214/367 (58%), Gaps = 14/367 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 17 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLGIDPAHDVTNRNKRSVVVDL 76
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +LA ++DV++E +R GV E+L +GP NPRL+Y R++G+GQ+GP +
Sbjct: 77 KAPDGPARVLDLAERADVLIEGYRPGVAERLGVGPRDCHARNPRLVYGRMTGWGQEGPLA 136
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L + G + P P NL D+ GG L +GI+ AL + G G
Sbjct: 137 RRAGHDIGYIALTGTLGMTGAPDVPPAAPANLLGDYAGGSLYLVVGILAALHHAREDGTG 196
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TYET DGR+MAVGALE
Sbjct: 197 QVVDAAIVDGTAHLSAMIHGMLAAGAWQDRRGANLLDGGCPFYGTYETADGRYMAVGALE 256
Query: 239 SQFYAQLLAGLGMTE----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+ + LG+ + + P E RA + +FK +T+ EW +F ++DAC PV
Sbjct: 257 PQFYAEFMRLLGIPDLAPARDDPARWPEL-RAAVAARFKSRTRDEWTAVFADSDACTAPV 315
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL +A HPH R +F G+ PAPAPR S TP T + PA PG T V+R
Sbjct: 316 LSLREAPHHPHLAARSTFT-EHDGITQPAPAPRFSATPTTVRT---GPALPGADTEAVVR 371
Query: 354 HFGYSDA 360
+G A
Sbjct: 372 DWGLPRA 378
>gi|91782294|ref|YP_557500.1| alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
gi|91686248|gb|ABE29448.1| Alpha-methylacyl-CoA racemase [Burkholderia xenovorans LB400]
Length = 368
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 199/333 (59%), Gaps = 5/333 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EF L P PFC M+L + GA V++I + A + + G++ + ++LK+
Sbjct: 10 LSGVRVIEFGALGPVPFCAMLLADMGADVVQITRPRAAIDTGNFMQRGRRLVPLDLKQPH 69
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+L +DV+LE R GVME L LGP+V NPRL+Y R++G+GQ GP + AG
Sbjct: 70 DRDAALDLIAHADVLLEGSRPGVMENLGLGPNVCAARNPRLVYGRMTGWGQTGPLAPTAG 129
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G+L +G + P PP NL D+GGG + A G + AL+E SG GQVID
Sbjct: 130 HDINYIALTGVLDAIGTADGAPVPPLNLVGDYGGGAMFLAFGTLCALWEARTSGHGQVID 189
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+GSA L S R W+ PRG ++LDGGA +Y TY T D R++AVGALE F+
Sbjct: 190 AAMVDGSAMLMSLFCRLLAQGEWNGPRGTHMLDGGAPWYATYRTADDRYVAVGALEEPFW 249
Query: 243 AQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
LLAGL + E LP RA L F +T+ W F ++DACV+PVLSL
Sbjct: 250 QALLAGLEIPAESLPPRSDRAAWPAIRAALAASFATRTRDAWTGHFRHSDACVSPVLSLQ 309
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + H R +++ +R G V PA APRLSRT
Sbjct: 310 ETVENEHINARQTYVADR-GFVRPAAAPRLSRT 341
>gi|387874237|ref|YP_006304541.1| far [Mycobacterium sp. MOTT36Y]
gi|386787695|gb|AFJ33814.1| far [Mycobacterium sp. MOTT36Y]
Length = 359
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 208/338 (61%), Gaps = 11/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E G+ P P GM+L + GA V+R+ + + +D + GK+ + +++
Sbjct: 6 LAGVRVIELGGIGPGPHAGMLLADLGADVVRVRRPSGGLEMPAEGRDLLHRGKRIVDLDV 65
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + LA ++DV+L+ FR G E+L +GPD +NPRL++AR++G+GQDGP +
Sbjct: 66 KTQP--QALLELAAKADVLLDCFRPGTCERLGIGPDDCAAANPRLVFARITGWGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL +G LS LG+ +R P PP NL ADFGGG ++ GI +AL+ER +SG+G
Sbjct: 124 RTAGHDINYLSQTGALSALGYADRPPIPPLNLVADFGGGSMLVVFGIAVALYERERSGKG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+G + L + + T R LLDGGA FY YET DG ++AVGA+E
Sbjct: 184 QVIDAAMVDGVSLLAQMMWTMKSTGALRDRRESFLLDGGAPFYGCYETADGGYVAVGAIE 243
Query: 239 SQFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+A LLAGLG++ E++P + R T++F +T+ EW F TDACVTPV
Sbjct: 244 PQFFAALLAGLGLSPEDVPGQLDKDSYPRMREIFTKRFASRTRDEWVRTFAGTDACVTPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
L+ ++A + H R + I GV APAPR SRTP
Sbjct: 304 LTWTEAATDDHLRTRSTVI-TAHGVDQAAPAPRFSRTP 340
>gi|333023233|ref|ZP_08451297.1| putative fatty acid-CoA racemase [Streptomyces sp. Tu6071]
gi|332743085|gb|EGJ73526.1| putative fatty acid-CoA racemase [Streptomyces sp. Tu6071]
Length = 384
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 210/352 (59%), Gaps = 18/352 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQPFVQDTVGYGKKSLCI 56
L G+ VLE AGL P PF M+L + GA V+R+D+ G P + D GK+S+ +
Sbjct: 11 LGGVRVLELAGLGPGPFAAMLLADLGADVVRVDRPERGGMFGMDPAL-DFTNRGKRSVEL 69
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G + + LA ++D+++E FR GV E+L +GP+ +NPRL+Y R++G+GQ+GP
Sbjct: 70 DLKTEEGAAAVLALAERADLLVEGFRPGVAERLGVGPEQALAANPRLVYGRVTGWGQEGP 129
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+ YL +G L+L G PT P NL DF GG L +G++ AL ++G
Sbjct: 130 LAHRAGHDLTYLAPTGALALGGDPEAPPTFPANLLGDFAGGSLYLVVGLLAALRHAERTG 189
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+G+A+L + L W RG NLLDGG+ FY YET DG+ MAVGA
Sbjct: 190 EGQVVDAAIVDGAAHLTTLLHGLMAAGGWQDRRGSNLLDGGSPFYGCYETADGKHMAVGA 249
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
LE +FY + LG+ + + + RA++ F+ +T+AEW ++F ++D CV P
Sbjct: 250 LEKRFYNEFTERLGIAGTAPAREDFDHWDELRARIAAAFRTRTRAEWTKVFADSDGCVAP 309
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG 345
VLSL +A HPH R +F+P G PAPAPR S TP PAPG
Sbjct: 310 VLSLREAPHHPHLAVRNTFVPGPDGTPQPAPAPRFSATPA--------PAPG 353
>gi|414176224|ref|ZP_11430453.1| hypothetical protein HMPREF9695_04099 [Afipia broomeae ATCC 49717]
gi|410886377|gb|EKS34189.1| hypothetical protein HMPREF9695_04099 [Afipia broomeae ATCC 49717]
Length = 374
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 213/364 (58%), Gaps = 10/364 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQDTVGYGKKSLCINLKKA 61
L+G+ V+EFAG+ P PF M+L++ GA V+ I + G + V+D V G++ + ++LK
Sbjct: 11 LRGVRVIEFAGIGPGPFASMLLSDMGADVVSIARPGQGKRDVRDFVNRGRRVIELDLKNP 70
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
++ +L +DV++E FR VME+L LGPDV+ K NP+L+Y R++G+GQ+GP S A
Sbjct: 71 ADIAKALDLIGAADVLIEGFRPQVMERLGLGPDVVLKRNPKLVYGRMTGWGQEGPLSQAA 130
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ ++G L N P NL D+GGG + +G++ + E SG+GQV+
Sbjct: 131 GHDINYIAITGALDSFRAANGETVSPLNLVGDYGGGAMYLVVGVLAGVIEARASGKGQVV 190
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLW-DKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
D M +G + + + + T W D+PR NLLDGGA FY TYE KDG FMA+GALE Q
Sbjct: 191 DAAMCDGVSSMLTMFHSMKATGRWTDQPR-TNLLDGGAPFYRTYECKDGGFMAIGALEPQ 249
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLS 296
FYA+L G++E+ G L EK FK KT+ EW I + +DAC V
Sbjct: 250 FYAELRKLAGLSEDCYDAQMDRKGWPHLHEKMTALFKTKTRDEWAAILEGSDACAAAVRG 309
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
L A SHPH R +F+ N G + PAPAPR SRTP S I P V E+L +
Sbjct: 310 LFDAPSHPHLAARKTFV-NVDGHLQPAPAPRFSRTP--SNIQGSPAVPPVDAAEILSQWS 366
Query: 357 YSDA 360
A
Sbjct: 367 QKTA 370
>gi|456386703|gb|EMF52239.1| fatty acid-coA racemase [Streptomyces bottropensis ATCC 25435]
Length = 407
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 213/362 (58%), Gaps = 12/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G + D K+S+ ++L
Sbjct: 10 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGTGLAVNPLYDVTNRNKRSVIVDL 69
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G ++ LA+++D+++E +R GV E+L +GP+ NPRL+Y R++G+GQ GP +
Sbjct: 70 KSPAGPDLVLGLADRADILIEGYRPGVAERLGVGPETCHARNPRLVYGRMTGWGQQGPLA 129
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L ++G + P P NL D+ GG L +G++ AL +G G
Sbjct: 130 RRAGHDIAYIALTGTLGMIGAPDTPPPAPANLLGDYAGGSLYLVVGVLAALHHARATGAG 189
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W R NLLDGG FY TYET DGR+MAVGALE
Sbjct: 190 QVVDAAIVDGTAHLSAMIHGMLAAGGWQDRRAANLLDGGCPFYGTYETADGRYMAVGALE 249
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+ + LG+ + + +V R + +F+ +T+ EW +F+ +DACV PVL
Sbjct: 250 QQFYAEFVDLLGIADRAPARKDVAAWGELRESVAARFRSRTRDEWTAVFEGSDACVAPVL 309
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SLS+A HPH RG+F + G+ PAPAPR S T PA PG T EV
Sbjct: 310 SLSEAPHHPHLAARGTFT-DFGGITQPAPAPRFS---ATHTSVRGGPAQPGADTAEVAHD 365
Query: 355 FG 356
+G
Sbjct: 366 WG 367
>gi|21225024|ref|NP_630803.1| racemase [Streptomyces coelicolor A3(2)]
gi|4584477|emb|CAB40680.1| putative racemase [Streptomyces coelicolor A3(2)]
Length = 398
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 213/367 (58%), Gaps = 14/367 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M L + GA V+R+D+ G D K+S+ ++L
Sbjct: 17 LAGVRVVELAGIGPGPFAAMFLADLGADVVRVDRPGGPGLGIDPAHDVTNRNKRSVVVDL 76
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +LA ++DV++E +R GV E+L +GP NPRL+Y R++G+GQ+GP +
Sbjct: 77 KAPDGPARVLDLAERADVLIEGYRPGVAERLGVGPRDCHARNPRLVYGRMTGWGQEGPLA 136
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L + G + P P NL D+ GG L +GI+ AL + G G
Sbjct: 137 RRAGHDIGYIALTGTLGMTGAPDVPPAAPANLLGDYAGGSLYLVVGILAALHHAREDGTG 196
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TYET DGR+MAVGALE
Sbjct: 197 QVVDAAIVDGTAHLSAMIHGMLAAGAWQDRRGANLLDGGCPFYGTYETADGRYMAVGALE 256
Query: 239 SQFYAQLLAGLGMTE----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA+ + LG+ + + P E RA + +FK +T+ EW +F ++DAC PV
Sbjct: 257 PQFYAEFMRLLGIPDLAPARDDPARWPEL-RAAVAARFKSRTRDEWTAVFADSDACTAPV 315
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL +A HPH R +F G+ PAPAPR S TP T + PA PG T V+R
Sbjct: 316 LSLREAPHHPHLAARSTFT-EHDGITQPAPAPRFSATPTTVRT---GPALPGADTEAVVR 371
Query: 354 HFGYSDA 360
+G A
Sbjct: 372 DWGLPRA 378
>gi|432333066|ref|ZP_19584877.1| alpha-methylacyl-CoA racemase Mcr [Rhodococcus wratislaviensis IFP
2016]
gi|430779997|gb|ELB95109.1| alpha-methylacyl-CoA racemase Mcr [Rhodococcus wratislaviensis IFP
2016]
Length = 368
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 211/363 (58%), Gaps = 13/363 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFVQDTVGYGKKSLCINL 58
L G+ ++E AG+ P+P M+L + GA V+R+++ G P +D ++S+ +L
Sbjct: 5 LDGLKIVELAGIGPSPHAAMLLADLGAEVVRVERPGGVTQLLPVDKDAGLRNRRSVSADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K L+ + L +++DV++E +R G E+L +GPDV + NPRL+YAR++G+GQDGP +
Sbjct: 65 KDPADLAKVLKLVDKADVLIEGYRPGAAERLGIGPDVCRERNPRLVYARITGWGQDGPLA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL LSG L+ +G P P NL AD GGG + +GI+ AL+ R+++G G
Sbjct: 125 PYAGHDINYLALSGALNAIGREGERPLAPLNLVADLGGGSMQAVMGILGALYARAQTGVG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D MV+G + L + ++ LW RG N++DGGA FYDTYE DGR++AVGA+E
Sbjct: 185 DVVDIAMVDGVSALMTMFWTLAESGLWSDRRGTNVIDGGAPFYDTYECADGRYIAVGAVE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
FYA+LL GLG+ LP E+ R E F + + W + F DACVTPV
Sbjct: 245 PVFYARLLEGLGLDPGGLPDQYDESAWPTLRKNFAEVFATRDRDSWVQAFARLDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP-APGVHTREVLR 353
L+L + HPH R + + + G PA APR + T P PG T V R
Sbjct: 305 LALDEVPDHPHISARNTIV-SAFGQRQPAAAPRFA---SAHDATYDAPRTPGADTEAVYR 360
Query: 354 HFG 356
+G
Sbjct: 361 DWG 363
>gi|409391791|ref|ZP_11243449.1| putative alpha-methylacyl-CoA racemase [Gordonia rubripertincta
NBRC 101908]
gi|403198392|dbj|GAB86683.1| putative alpha-methylacyl-CoA racemase [Gordonia rubripertincta
NBRC 101908]
Length = 363
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 202/336 (60%), Gaps = 8/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG--AQPFVQDTVGY-GKKSLCINLK 59
L G+ VLE AG+ P P M+L + GA V+R+ + G A + G G+ + +L+
Sbjct: 9 LAGVRVLELAGMGPGPHAAMVLADLGADVVRVQRRGGLATAGTGSSAGLRGRTIVEADLR 68
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
L + L ++D+++E FR GV E+L LGPD + + NPRLIY R++G+GQ+GP +
Sbjct: 69 NPDDLRDVLRLVARADILIEGFRPGVTERLGLGPDDVAEVNPRLIYGRMTGWGQNGPRAM 128
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ L+G+L +G P PP NL DFGGG + +G++ AL ER SGRGQ
Sbjct: 129 EAGHDLNYISLTGLLHAVGRPGERPVPPLNLFGDFGGGSMFLVIGLISALVERQTSGRGQ 188
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
+ID +V G+A LG L + + W RGEN+ DG A FYDTYE DG+++AVGALE
Sbjct: 189 IIDAAIVNGAAALGHLLWAMRGSGRWSDDRGENIFDGSAPFYDTYECSDGKYVAVGALEP 248
Query: 240 QFYAQLLAGLGMTEEEL-PQHEVET---GRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+A ++ LG+ E+ Q E E R E F +++ EW +F DACVTPVL
Sbjct: 249 QFFATMVKTLGLDPAEVGAQREPENYPHMRKLFAECFASRSRDEWASVFAGVDACVTPVL 308
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ ++A + P V RG F G+ PAPAP SRT
Sbjct: 309 TFAEAEADPQMVARGVFT-TIDGITQPAPAPSFSRT 343
>gi|424859029|ref|ZP_18283043.1| L-carnitine dehydratase [Rhodococcus opacus PD630]
gi|356661538|gb|EHI41849.1| L-carnitine dehydratase [Rhodococcus opacus PD630]
Length = 384
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/380 (39%), Positives = 219/380 (57%), Gaps = 21/380 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRI------DKHGAQPFVQDTVGYGKKSLCI 56
+ G+ VLE G+ P PF M+L + GATVIR+ DKH + G+ ++ +
Sbjct: 1 MAGLRVLELGGIGPGPFAAMMLADMGATVIRLVRGKGWDKH-------PILNRGRVTIEV 53
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + + ++ +A D ++E FR GV E+L LGP L NP L+Y R++G+GQDGP
Sbjct: 54 DLKNPESIEAVRRIAQGCDAVVEGFRPGVAERLGLGPKDLHALNPTLVYGRMTGWGQDGP 113
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++S GHDINYL L+G L +G ++ +P PP NL +DFGGGG++ A GIV AL K+G
Sbjct: 114 WASAPGHDINYLSLTGGLHAIGPKDGDPVPPLNLVSDFGGGGMLLAYGIVCALTNAQKTG 173
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D MV+G++ L + W RG N+LDG A FY TY +DGR MA G
Sbjct: 174 EGQVVDAAMVDGTSLLLAMTYGFLADGFWRDERGSNMLDGAAPFYRTYRCQDGRHMAAGC 233
Query: 237 LESQFYAQLLAGLGMTEEEL--PQHE---VETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E QFY + L LG+ ++ L QH+ E ++ F +T+AEW + F +T+AC
Sbjct: 234 VEPQFYREFLRVLGLADDPLFADQHDRALWEEQGVRIAALFATRTRAEWEQAFADTEACT 293
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
TPVLSLS+A HPH R + + G+V P PAPR S TP ++ + AP +
Sbjct: 294 TPVLSLSEAHRHPHMAARVT-LAEHDGIVQPMPAPRFSGTPASAPEPQAASAPSIEA--A 350
Query: 352 LRHFGYSDANIEELIREDVI 371
L G+ +L+ + V+
Sbjct: 351 LAAVGFDPDEARKLVADGVL 370
>gi|379745569|ref|YP_005336390.1| far [Mycobacterium intracellulare ATCC 13950]
gi|379752854|ref|YP_005341526.1| far [Mycobacterium intracellulare MOTT-02]
gi|378797933|gb|AFC42069.1| far [Mycobacterium intracellulare ATCC 13950]
gi|378803070|gb|AFC47205.1| far [Mycobacterium intracellulare MOTT-02]
Length = 359
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 207/338 (61%), Gaps = 11/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E G+ P P GM+L + GA V+R+ + + +D + GK+ + +++
Sbjct: 6 LAGVRVIELGGIGPGPHAGMLLADLGADVVRVRRPSGGLEMPAEGRDLLHRGKRIVDLDV 65
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + L ++DV+L+ FR G E+L +GPD +NPRLI+AR++G+GQDGP +
Sbjct: 66 KTQP--QALLELTAKADVLLDCFRPGTCERLGIGPDDCAAANPRLIFARITGWGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL +G LS LG+ +R P PP NL ADFGGG ++ GI +AL+ER +SG+G
Sbjct: 124 RTAGHDINYLSQTGALSALGYADRPPIPPLNLVADFGGGSMLVVFGIAVALYERERSGKG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+G + L + + T R LLDGGA FY YET DG ++AVGA+E
Sbjct: 184 QVIDAAMVDGVSLLAQMMWTMKSTGALRDRRQSFLLDGGAPFYGCYETADGGYVAVGAIE 243
Query: 239 SQFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+A LLAGLG++ E++P + R T++F +T+ EW F TDACVTPV
Sbjct: 244 PQFFAALLAGLGLSPEDVPGQLDKDSYPRMREIFTKRFASRTRDEWARTFAGTDACVTPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
L+ ++A + H R + I GV APAPR SRTP
Sbjct: 304 LTWTEAATDDHLRTRSTVI-TAHGVDQAAPAPRFSRTP 340
>gi|418468109|ref|ZP_13038939.1| racemase [Streptomyces coelicoflavus ZG0656]
gi|371551285|gb|EHN78603.1| racemase [Streptomyces coelicoflavus ZG0656]
Length = 395
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 211/362 (58%), Gaps = 12/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G +D K+S+ ++L
Sbjct: 17 LSGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLGIDPARDVTNRNKRSVVVDL 76
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +LA ++DV++E +R GV E+L +GP NPRL+Y R++G+GQ+GP +
Sbjct: 77 KAPDGPARVLDLAERADVLIEGYRPGVAERLGVGPGDCHARNPRLVYGRMTGWGQEGPLA 136
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L ++G P P NL D+ GG L +GI+ AL +G G
Sbjct: 137 RRAGHDIGYIALTGTLGMIGAPGEPPAVPANLLGDYAGGSLYLVVGILAALHHARANGTG 196
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG FY TYET DGR MAVGALE
Sbjct: 197 QVVDAAIVDGTAHLSAMIHGMLAAGSWQDRRGANLLDGGCPFYGTYETADGRHMAVGALE 256
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYA+ + LG+T+ + ++ RA + +FK +T+ W +F ++DAC PVL
Sbjct: 257 PRFYAEFMRLLGLTDLAPARDDMSRWPELRAAVAARFKTRTRDAWTAVFTDSDACTAPVL 316
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SL +A HPH R +F + G+ PAPAPR S TP + PA PG V R
Sbjct: 317 SLREAPHHPHLAARSTFT-DHDGLTQPAPAPRFSATPTAVRT---GPALPGDGAESVTRD 372
Query: 355 FG 356
+G
Sbjct: 373 WG 374
>gi|226366511|ref|YP_002784294.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus B4]
gi|226245001|dbj|BAH55349.1| putative alpha-methylacyl-CoA racemase [Rhodococcus opacus B4]
Length = 365
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 202/337 (59%), Gaps = 8/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L GI VLE AG+ P P M+L + GA V+R+ + G P T G+ + +LK
Sbjct: 11 LAGIRVLELAGMGPGPHAAMLLADLGADVVRVQRAGGLPAPDRTASQQLRGRTIVEADLK 70
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + ++++ L +++DV++E FR GV E++ LGP+ NPRLIY R++G+GQ GP +
Sbjct: 71 RPEDVAMVLGLLDRADVLVEGFRPGVTERMGLGPEEALTRNPRLIYGRVTGWGQSGPRAL 130
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ ++G+L +G ++ P PP NL DFGGG + +G++ AL ER SG GQ
Sbjct: 131 QAGHDLNYISVTGLLHAVGRKDERPVPPLNLFGDFGGGSMFLVVGVLAALVERQLSGWGQ 190
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV G+ L L + T W RG N+ DG A FYDTYE DG+++AVGALE
Sbjct: 191 VVDAAMVNGAPALAHLLWSMRGTGQWSNDRGTNVFDGSAPFYDTYECSDGKYVAVGALEP 250
Query: 240 QFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA+LL L + L Q +VE R TEKF +T+ EW F + DACVTPVL
Sbjct: 251 QFYAELLRVLDIDPATLGHQRDVEGWPLVRKLFTEKFASRTRDEWAAQFADVDACVTPVL 310
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A P + R F + GV+ PAPAP SRTP
Sbjct: 311 DFDEAARDPQMMDRRVFT-DLDGVLQPAPAPAFSRTP 346
>gi|254418404|ref|ZP_05032128.1| CAIB/BAIF family [Brevundimonas sp. BAL3]
gi|196184581|gb|EDX79557.1| CAIB/BAIF family [Brevundimonas sp. BAL3]
Length = 363
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 205/337 (60%), Gaps = 16/337 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ--PFVQDTVG----YGKKSLCI 56
L G+ +LEF GL P F G++L + GA V+R+ + + P + G G+ ++ +
Sbjct: 6 LNGLRILEFDGLGPVTFAGLMLADMGAEVLRLTRAASAGAPVFAEVGGALLHRGRTAVPV 65
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + L + +D ++E FR GVME+L GP+VL NP L++ R++G+GQ GP
Sbjct: 66 DLKSDSDRERILRLVDGADAVIEGFRPGVMERLGYGPEVLHARNPALVFGRVTGWGQTGP 125
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ GHD+NY+GLSG+L +G +R P PP NL D+GGG +M G++ AL E +G
Sbjct: 126 LADAVGHDLNYIGLSGVLHAMGEADRPPPPPLNLVGDYGGGAMMLTTGVLAALLEARTTG 185
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RG+V+D M +G+A LG + LW + RG NLLDGGA FY Y +DG F+AV A
Sbjct: 186 RGRVVDAAMTDGAALLGGLFQALRGQGLWGERRGANLLDGGAPFYRCYACRDGGFVAVAA 245
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVT 292
LE +FYA LLAGLG+ E PQH+ TG A L ++ F + + +W F T+ACVT
Sbjct: 246 LEPRFYAALLAGLGINPSEAPQHD-RTGWAVLHDRFAGLFAARDRDDWTTHFAGTEACVT 304
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS 329
PVLSL++A HPHN R +F R G+ PAPAPR
Sbjct: 305 PVLSLAEAPDHPHNRDRATF---RNGL--PAPAPRFD 336
>gi|397735161|ref|ZP_10501864.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
gi|396929386|gb|EJI96592.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
Length = 380
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/381 (43%), Positives = 235/381 (61%), Gaps = 17/381 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-------AQPFVQDTVGYGKKSLC 55
L G+TV+E A LAPAPF MIL + GA VIR+++ G A V D G++S+
Sbjct: 6 LSGLTVVEIASLAPAPFGCMILADLGADVIRVERAGDGGSGLMAPSGVLDR---GRRSIA 62
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+NL+ +GL + L +D+++E FR GV E+L +GPD NP LIY R++G+GQ+G
Sbjct: 63 VNLRTPEGLEAVLTLVEAADILVEGFRPGVAERLGIGPDDCLSRNPGLIYGRMTGWGQEG 122
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ L+G L +G P PP NL DFGGGGLM +GI+ AL ERS+S
Sbjct: 123 PLAPRAGHDINYIALAGALEPIGRAGERPVPPLNLLGDFGGGGLMLTMGILAALHERSRS 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQV+D +MV+G+A L +++ LW + R N+LDG A FYDTYE DG +AVG
Sbjct: 183 GRGQVVDASMVDGAALLTAFVHGMNAAGLWQEGRERNVLDGAAAFYDTYECADGLHVAVG 242
Query: 236 ALESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E FY +LL LG++ E+LP Q++++ + +L E F + + +W +F ++DACV
Sbjct: 243 CVEPHFYGELLDVLGLSGEDLPLQYDLDAAPELKKRLAEVFATRPRDDWAALFADSDACV 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
+PVLS +A HPHN R +F+ G+ PAPAPR SRT + + P PG T +
Sbjct: 303 SPVLSPWEAHEHPHNKERETFV-EVGGIRQPAPAPRFSRT--PAPVPRPAPRPGQDTDAI 359
Query: 352 LRHFGYSDANIEELIREDVIE 372
L GY + IE+L +E
Sbjct: 360 LAQAGYDPSRIEQLRSAGAVE 380
>gi|451853904|gb|EMD67197.1| hypothetical protein COCSADRAFT_34053 [Cochliobolus sativus ND90Pr]
Length = 369
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/284 (48%), Positives = 195/284 (68%), Gaps = 7/284 (2%)
Query: 22 MILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPF 81
M+L ++GA+V+R+D+ P D + K S+C+NLK GL+++K + + D++++PF
Sbjct: 1 MLLADYGASVLRLDRAPGTP-TTDQLTRRKTSICVNLKSPAGLALIKKIIPRVDILIDPF 59
Query: 82 RKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWR 140
R GV+EK L P+ VL K N RLI AR++G+ +DG Y+ MAGHDINY+ +SG+LS+ G +
Sbjct: 60 RPGVLEKAGLDPERVLLKLNKRLIIARMTGFRRDGKYAQMAGHDINYIAVSGVLSMFGRK 119
Query: 141 NRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQ 200
P PP N+ DF GGG MC +GI++AL R +SG GQV++ NMV+GSA L +
Sbjct: 120 GEKPYPPGNVVGDFAGGGAMCFIGILLALLARERSGFGQVVEANMVDGSAILATMPRLGL 179
Query: 201 DTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELP--- 257
T +W + RG N+LDGGA FYDTYETKDG FMAVGA+E QFYA LL G+G+ +LP
Sbjct: 180 KTEVWKRERGTNMLDGGAPFYDTYETKDGGFMAVGAIEPQFYAALLKGMGLKASDLPGSR 239
Query: 258 QHEVETGRAK--LTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
+ V+ + K T +FK+KT+AEW IFD TDAC TPV + ++
Sbjct: 240 DNMVDWPKLKDFFTAEFKKKTRAEWEAIFDGTDACCTPVFTQAE 283
>gi|148554653|ref|YP_001262235.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
gi|148499843|gb|ABQ68097.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
Length = 368
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 219/350 (62%), Gaps = 16/350 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-----AQPFV-QDTVGYGKKSLC 55
AL G+ ++E A + P PFC M+L + GA V+RI++ G A P +D + +++
Sbjct: 17 ALAGLRIIEIASIGPGPFCAMMLADHGAEVLRIERPGDPLGAAAPLGGRDVLLRSRRTHV 76
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G++ ++ LA ++D ++E FR GVME+L LGPD+L NPRL+Y R++G+GQ G
Sbjct: 77 LDLKDPAGVAAVRALAREADGLVEGFRPGVMERLGLGPDLLLADNPRLVYGRMTGWGQTG 136
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ L+G L G + PTPP N ADFGGGG+M A G++ + ++
Sbjct: 137 PMAPRAGHDINYIALAGNLHGYGRADGKPTPPINAVADFGGGGMMMAFGMLAGIMAARRT 196
Query: 176 GRGQVIDCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
GRGQVIDC MV+G+ LG +W QD W RG NLLD GA FYD+YET DGR +A
Sbjct: 197 GRGQVIDCAMVDGAGLLGAMTWSFLAQDA--WTDERGVNLLDTGAPFYDSYETADGRHVA 254
Query: 234 VGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTD 288
+GALE QFYA LL LG+ ++ L + + RA+L F+ +++ EW +FD D
Sbjct: 255 IGALEPQFYALLLDRLGVADDPLFARQNDRAAWPAMRARLEALFRSRSRDEWTALFDGCD 314
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
AC PVLSL++A PH+ R SF+ G + PAPAPR S TP +
Sbjct: 315 ACFAPVLSLAEAPRDPHSRARDSFVAVD-GHIQPAPAPRFSATPARRPVA 363
>gi|119504712|ref|ZP_01626790.1| L-carnitine dehydratase/bile acid-inducible protein F [marine gamma
proteobacterium HTCC2080]
gi|119459317|gb|EAW40414.1| L-carnitine dehydratase/bile acid-inducible protein F [marine gamma
proteobacterium HTCC2080]
Length = 381
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 216/376 (57%), Gaps = 18/376 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG----AQPFVQDTVGY-----GKKS 53
L G+ V+E AG+ P P GM+L + GA V I++ A P Q + GK+S
Sbjct: 6 LAGVKVVELAGIGPGPCAGMMLADMGAEVTVIERRSPNANAAPTSQQMAAHTFYNRGKRS 65
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+ ++LK G+ ++ L SD+++E FR GVME+L LGPDV NPRL++ R++G+GQ
Sbjct: 66 VAVDLKNPAGVELVLELVADSDLLIEGFRPGVMERLGLGPDVCLARNPRLVFGRMTGWGQ 125
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP + AGHD NY+ LSG L G +R P+ P L D GGG ++ G++ LF
Sbjct: 126 SGPLAHAAGHDPNYIALSGALWPGGSTDRVPSAPLTLVGDIGGGTMILIFGLLSGLFHAQ 185
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
K+G+GQV+D + +GSAY+ S L +T G D GA + DTY DG+++
Sbjct: 186 KTGQGQVVDAAITDGSAYISSLLRMMHNTGQISDEPGSGWADFGAPWNDTYACSDGQYIT 245
Query: 234 VGALESQFYAQLLAGLGMTEEEL-----PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTD 288
+ LE QFY L+A LG+ ++ L + + G+ ++ E F EKT+ +WC + + TD
Sbjct: 246 ICPLEPQFYGDLIARLGLGDDPLFADQWDKTQWPAGKLRMAELFGEKTRDDWCALLEGTD 305
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
C PVL+L++A HPHNV R +FI R GVV PAPAP+ S T T P PG HT
Sbjct: 306 VCFAPVLNLTEAVEHPHNVARETFI-TREGVVQPAPAPQFSVTKPTVGAC---PVPGQHT 361
Query: 349 REVLRHFGYSDANIEE 364
E+++ G +A + +
Sbjct: 362 AEIVQALGLDEAKLRD 377
>gi|326329402|ref|ZP_08195726.1| putative alpha-methylacyl-CoA racemase [Nocardioidaceae bacterium
Broad-1]
gi|325952728|gb|EGD44744.1| putative alpha-methylacyl-CoA racemase [Nocardioidaceae bacterium
Broad-1]
Length = 383
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/365 (41%), Positives = 216/365 (59%), Gaps = 8/365 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQDTVGYGKKSLCINLK 59
L+G+ V+E AG+ P P IL + GA VIR+D+ + D + G+ S+ ++LK
Sbjct: 10 LRGVKVVELAGIGPGPHACTILADMGADVIRVDRPGGNLLGGGAGDLLTRGRPSIALDLK 69
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + L +DV++E R GV ++L LGPD + NPRL+Y R++G+GQDGP +
Sbjct: 70 NPDAVETVLRLVEGADVLIEGLRPGVTDRLGLGPDACLERNPRLVYGRMTGWGQDGPLAQ 129
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+ Y+ +G+L+ LG P P NL DFGGG +GI+ AL E +G+GQ
Sbjct: 130 SAGHDLTYIATTGVLNGLGQDRARPHFPLNLLGDFGGGSTYLVMGILAALVEARTTGQGQ 189
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+G+A+L + ++ + W + R NLLDG FY Y+T DGR +AVGALE
Sbjct: 190 VVDAAIVDGTAHLATMISGMLASGAWHEQRQSNLLDGAMPFYALYDTADGRQVAVGALEG 249
Query: 240 QFYAQLLAGLGMTEEELPQHEVE---TGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
+F+A+L+ LG+ Q+E+E R + F KT AEW E+F+ TDACV PVL+
Sbjct: 250 KFFAELVTRLGLDGVCPGQYEMERYDEMRDLFAKTFASKTMAEWAELFEGTDACVAPVLT 309
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
S+A +HPH R +++ + GV PAPAPR SRT T A G HTRE L +G
Sbjct: 310 PSEAATHPHLQARQTYVTHH-GVTQPAPAPRFSRTASTLGAGPAASA-GQHTREALAAWG 367
Query: 357 YSDAN 361
DA+
Sbjct: 368 IDDAD 372
>gi|119718789|ref|YP_925754.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardioides
sp. JS614]
gi|119539450|gb|ABL84067.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardioides
sp. JS614]
Length = 385
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 217/371 (58%), Gaps = 12/371 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDT----VGYGKKSLCINL 58
L+G+ V+E AG+ P P M L + GA VIR+++ G Q + G+ S+ ++L
Sbjct: 12 LRGVKVVEIAGIGPGPHACMTLADLGADVIRVERPGGQLLAGGGPHMFLNRGRPSVALDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + + L +DV++E R GV E+L GP+V + NPRL+Y R++G+GQDGP++
Sbjct: 72 KHPDAIRTVLELVAGADVLVEGMRPGVAERLGFGPEVCHERNPRLVYGRMTGWGQDGPFA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+AGHD+NY+ ++G L LG P P NL DFGGG +G++ AL E SG+G
Sbjct: 132 QVAGHDLNYISITGALHGLGQDKARPHFPGNLLGDFGGGSTYLVIGVLAALLEARASGQG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + + R NLLDGG +YD YET DG+ M+VGALE
Sbjct: 192 QVVDAAIVDGTAHLNTMAAAFLAAGTFKEERAANLLDGGVPYYDIYETADGKHMSVGALE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHE---VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFY + + LG+ + +++ E R + + F+ +TQAEW E+F+ TDACV ++
Sbjct: 252 PQFYDEFVRLLGIADRAPDRYDADRAEALRTLIADTFRTRTQAEWVELFEGTDACVAGII 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
L++A HPH RG + R G + PAPAPR SRT T T + G TRE L +
Sbjct: 312 PLTEAAEHPHMRARGVLV-ERDGYLQPAPAPRFSRTAATLGRTAED--AGQSTREALAAW 368
Query: 356 GYSDANIEELI 366
G + +E L+
Sbjct: 369 GVT--GVEALL 377
>gi|383757964|ref|YP_005436949.1| L-carnitine dehydratase/bile acid-inducible protein F [Rubrivivax
gelatinosus IL144]
gi|381378633|dbj|BAL95450.1| L-carnitine dehydratase/bile acid-inducible protein F [Rubrivivax
gelatinosus IL144]
Length = 359
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 215/334 (64%), Gaps = 7/334 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EFAGL PAPF M+L + GA V+RI + G +P +D + +L ++L+
Sbjct: 5 LAGLRVIEFAGLGPAPFAAMLLADLGAEVLRITRPGVEPDPRDVTTRSRAALALDLRDPD 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + LA ++D+++E FR GVME+L LGPDV+ P L+Y R++G+GQDGP + AG
Sbjct: 65 GAAAALALAARADLLIEGFRPGVMERLGLGPDVVLARRPSLVYGRMTGWGQDGPLAQAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDI+Y+ +SG L+ +G R P PP N DFGGG ++ +G++ AL E SGRGQV+D
Sbjct: 125 HDIDYIAISGALAAIGVPGRPPVPPANYLGDFGGGAMLLVVGLLAALHEARSSGRGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L +++ + LW +PRGEN+LDGGAHFY Y+ DG+ +AVGA+E QFY
Sbjct: 185 AAMCDGAALLSAFMVGWKAQGLWSRPRGENMLDGGAHFYACYDCADGKPIAVGAIEPQFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A+L G+ + +++ GR KL F+ +T+AEWC + + TDAC PVL
Sbjct: 245 AELRRLAGIDDPAF-DAQLDAGRWPELKDKLAAIFRTRTRAEWCALLEGTDACFAPVLDW 303
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+A HPHN RG+++ GV+ PAPAPR SRT
Sbjct: 304 DEAPQHPHNAARGNWL-EAGGVMQPAPAPRFSRT 336
>gi|254818312|ref|ZP_05223313.1| Far [Mycobacterium intracellulare ATCC 13950]
Length = 359
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 207/338 (61%), Gaps = 11/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E G+ P P GM+L + GA V+R+ + + +D + GK+ + +++
Sbjct: 6 LAGVRVIELGGIGPGPHAGMLLADLGADVVRVRRPSGGLEMPAEGRDLLHRGKRIVDLDV 65
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + LA ++DV+L+ FR G E+L +GPD +NPRLI+AR++G+GQDGP +
Sbjct: 66 KTQP--QALLELAAKADVLLDCFRPGTCERLGIGPDDCAAANPRLIFARITGWGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL +G LS LG+ +R P PP NL ADFGGG ++ GI +AL+ER +SG+G
Sbjct: 124 RTAGHDINYLSQTGALSALGYADRPPIPPLNLVADFGGGSMLVVFGIAVALYERERSGKG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+G + L + + T R LLDGGA FY YET DG ++AVGA+E
Sbjct: 184 QVIDAAMVDGVSLLAQMMWTMKSTGALRDRRQSFLLDGGAPFYGCYETADGGYVAVGAIE 243
Query: 239 SQFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+A LL GLG++ E++P + R T++F +T+ EW F TDACVTPV
Sbjct: 244 PQFFAALLDGLGLSPEDVPGQLDKDSYPRMREIFTKRFASRTRDEWARTFAGTDACVTPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
L+ ++A + H R + I GV APAPR SRTP
Sbjct: 304 LTWTEAATDDHLRTRSTVI-TVHGVDQAAPAPRFSRTP 340
>gi|334343482|ref|YP_004556086.1| alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
gi|334104157|gb|AEG51580.1| Alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
Length = 364
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 203/334 (60%), Gaps = 7/334 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G ++E G+ P PF M+L + GA VIRID+ G DT+ +K L +NLK
Sbjct: 5 LSGYRIIEMGGIGPGPFAAMMLADHGAEVIRIDRPGTIWDPGDTMLRSRKRLILNLKNPD 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++ ++ LA +D ++E FR G ME+L LGP+ L NPRL+Y R++G+GQ GPY+ AG
Sbjct: 65 DVAALRELAKTADALIEGFRPGTMERLGLGPEALLADNPRLVYGRMTGWGQTGPYAPYAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HD+NY+ LSG +G + P PP L D GGGG+M A I AL +++G GQVID
Sbjct: 125 HDLNYISLSGAAHSIGTAD-APVPPLALTGDMGGGGMMLAFSITAALLNAARTGEGQVID 183
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
C M EGSA L + T W R NLLDGGA FY Y T DG+F+++G LE QFY
Sbjct: 184 CAMTEGSALLMTAFYGLHATGGWSDEREANLLDGGAPFYRPYRTADGKFVSIGPLEPQFY 243
Query: 243 AQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
+LL LG+ ++EL + + R +L F +TQAEW + ++TD C PVLS+
Sbjct: 244 RELLERLGLVDDELFADQEDRARWPAMRERLDALFAGRTQAEWRSVLEHTDVCFAPVLSM 303
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
++A HPHNV RG+F+ G+ PAPAPR SR+
Sbjct: 304 AEAPDHPHNVARGAFV-RVEGINQPAPAPRYSRS 336
>gi|302867284|ref|YP_003835921.1| L-carnitine dehydratase/bile acid-inducible protein F
[Micromonospora aurantiaca ATCC 27029]
gi|302570143|gb|ADL46345.1| L-carnitine dehydratase/bile acid-inducible protein F
[Micromonospora aurantiaca ATCC 27029]
Length = 398
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 226/391 (57%), Gaps = 26/391 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L G+ V+E AG+ P PF M+L + GA V+R+D+ G F D + ++S+ ++LK
Sbjct: 11 LTGVRVIELAGIGPGPFASMMLADLGADVVRVDRPGGGGFGAFPGDLLNRNRRSIAVDLK 70
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ +G ++ +L +D ++E FR GV E+L LGPD +NP+L+Y R++G+GQDGP +
Sbjct: 71 QPEGRDLVLDLVAGADALVEGFRPGVTERLGLGPDDCLAANPKLVYGRMTGWGQDGPLAQ 130
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDI+YL L+G L +G P PP NL D+GGGG+M ALG+V AL+ GQ
Sbjct: 131 RAGHDIDYLALTGALHGVGRAGERPVPPMNLLGDYGGGGMMLALGVVAALYAVRGGAPGQ 190
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+G + L + + + LW PRG NLLDGGA FYDTYE DGR++AVGALE
Sbjct: 191 VVDAAIVDGVSVLATQIHALRGIGLWQDPRGVNLLDGGAPFYDTYECADGRYVAVGALEP 250
Query: 240 QFYAQLL---------------AGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWC 281
QFYA+L+ AG + E L + + RA F+ +T+ EW
Sbjct: 251 QFYAELVRLTGFPPDGGDGPQDAGAAVGGEALDRDDPANWPALRAAWARLFRTRTRDEWT 310
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFI-PNRAGVVAPAPAPRLSRTPGTSKITEH 340
E+ TDACV PVL ++A HPH R F+ P+ GV PAPAPR S TP + +
Sbjct: 311 ELLAGTDACVAPVLDWAEAPEHPHLRAREVFVAPD--GVTQPAPAPRFSATP--TSVRRP 366
Query: 341 NPAPGVHTREVLRHFGYSDANIEELIREDVI 371
P+PG HT EVL G I L VI
Sbjct: 367 PPSPGEHTDEVLAGAGIDAGRIAALRAAGVI 397
>gi|158313794|ref|YP_001506302.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
gi|158109199|gb|ABW11396.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
Length = 369
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 201/339 (59%), Gaps = 11/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E AG+ P P MIL + GA V+RI + D G++ + ++L+ A
Sbjct: 5 LSGLRVVELAGIGPGPHGAMILADLGADVVRIQRPELGDGPDDLQLRGRRIVRVDLRSAD 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + L ++DV++E +R GV E+L LGP NPRL+YAR++G+GQ GP ++ AG
Sbjct: 65 GREQVLGLVERADVLIEGYRPGVTERLGLGPADCQARNPRLVYARMTGWGQTGPLANRAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L +G + P P NL D+GGG + +GI+ AL ER +SG GQVID
Sbjct: 125 HDINYISLTGALHAMGEAGQRPPVPLNLVGDYGGGSMFLLVGILSALLERERSGEGQVID 184
Query: 183 CNMVEGSAYLGS--WLTRTQDTFL----WDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+V+G+ L W R + W RG NLLDG FYDTY DGRF+AVG
Sbjct: 185 AAIVDGTNVLTQMMWAWRGMGDWHGFGDWSDERGVNLLDGSRPFYDTYTCADGRFVAVGP 244
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE QFYA+LL LG+ + LP TG R T+ F +T+ EW EIF +TDACVT
Sbjct: 245 LEPQFYARLLEVLGLADAGLPDQFDPTGWPVLRDAFTKAFAARTRDEWTEIFADTDACVT 304
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVLS ++ HPH RG+ + + G+ APAPR SR+
Sbjct: 305 PVLSFAEVQDHPHMADRGAVV-HTDGMAQAAPAPRFSRS 342
>gi|220923546|ref|YP_002498848.1| L-carnitine dehydratase/bile acid-inducible protein F
[Methylobacterium nodulans ORS 2060]
gi|219948153|gb|ACL58545.1| L-carnitine dehydratase/bile acid-inducible protein F
[Methylobacterium nodulans ORS 2060]
Length = 367
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 209/338 (61%), Gaps = 8/338 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP-FVQDTVGYGKKSLCINLKKA 61
L G+ ++EFAG+ P PF M+L + GA V+RI + G + + + + ++ +LK
Sbjct: 15 LAGLRLVEFAGIGPGPFAAMLLADLGAEVVRIARPGGSDLYARHVLTRSRATVTADLKDP 74
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
L+ + + + +D ++E FR GVME+L LGPD++ NPRL+Y R++G+GQ+GP + A
Sbjct: 75 ADLARVLDCLDHADALIEGFRPGVMERLGLGPDLVLARNPRLVYGRMTGWGQEGPLARSA 134
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+ Y+ ++G L+ +G R+ +P PP NL DFGGG L A+G++ A+ +G GQV+
Sbjct: 135 GHDLTYIAVTGALAAIGPRS-HPVPPLNLLGDFGGGALYLAMGLLAAVLSARATGAGQVV 193
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
DC + +G+A L + W + R NLLDGGA +Y TY DG F+A+ LE QF
Sbjct: 194 DCAVCDGAASLMAMTADFAAQGRWVEEREANLLDGGAPYYRTYRCADGGFVALAPLEPQF 253
Query: 242 YAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+A+ +G+ EE P + G R +L E F +T+AEWC + + +DACV PVLSLS
Sbjct: 254 FAEFRRRVGL--EEDPAFDDRDGAALRRRLEELFLTRTRAEWCRLLEGSDACVAPVLSLS 311
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK 336
+A HPH RG+++ GV+ PAPAPR SRTP +
Sbjct: 312 EARHHPHLAARGTYL-EVDGVMQPAPAPRFSRTPAAIR 348
>gi|303319725|ref|XP_003069862.1| alpha-methylacyl-CoA racemase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109548|gb|EER27717.1| alpha-methylacyl-CoA racemase, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 396
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/320 (44%), Positives = 206/320 (64%), Gaps = 21/320 (6%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-----HGAQPFV----QDTVGYGK 51
+ L+G+ V+E AGLAP PF G++L ++GA+V+R+D+ H + +D + K
Sbjct: 6 LPLQGVRVVELAGLAPGPFAGLLLADYGASVLRVDRPHPNAHSTSKALPRPTKDALTRHK 65
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSG 110
S+ ++LK V+ +L +DV+++PFR GV+EKL L P VL K NPRLI AR++G
Sbjct: 66 TSISLDLKSPASKEVLLSLIRNADVLIDPFRPGVLEKLGLCPSTVLLKENPRLIVARMTG 125
Query: 111 YGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALF 170
+ +DG Y MAGHDINY+ +SG+L +LG P PP N+ DF GGG +C LGI++AL
Sbjct: 126 FRRDGKYKDMAGHDINYIAVSGVLGMLGRAGEAPYPPGNILGDFAGGGAICFLGILLALL 185
Query: 171 ERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-G 229
R +GRGQV++ NMV+GSAYL + ++ T +W+ PRG N+LDGG +Y TYETKD G
Sbjct: 186 SRQTTGRGQVVNANMVDGSAYLATMPRLSRKTPMWNGPRGTNVLDGGCPYYGTYETKDPG 245
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEEL-PQHEVETG---------RAKLTEKFKEKTQAE 279
+ A+G LE QF+ LL GL ++ ++ P + + R+ +KFK+KT+ E
Sbjct: 246 NYFAIGPLEPQFFDALLRGLQLSPSDVFPPNSNKVREDPSNWPFMRSVFEKKFKQKTRKE 305
Query: 280 WCEIFDNTDACVTPVLSLSQ 299
W +FD TDAC TPVL++ +
Sbjct: 306 WEAVFDGTDACATPVLTMDE 325
>gi|320034151|gb|EFW16096.1| alpha-methylacyl-CoA racemase [Coccidioides posadasii str.
Silveira]
Length = 396
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 207/320 (64%), Gaps = 21/320 (6%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQPF---VQDTVGYGK 51
+ L+G+ V+E AGLAP PF G++L ++GA+V+R+D+ ++P +D + K
Sbjct: 6 LPLQGVRVVELAGLAPGPFAGLLLADYGASVLRVDRPHPNAHSTSKPLPRPTKDALTRHK 65
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSG 110
S+ ++LK V+ +L +DV+++PFR GV+EKL L P VL K NPRLI AR++G
Sbjct: 66 TSISLDLKSPASKEVLLSLIRNADVLIDPFRPGVLEKLGLCPSTVLLKENPRLIVARITG 125
Query: 111 YGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALF 170
+ +DG Y MAGHDINY+ +SG+L +LG P PP N+ DF GGG +C LGI++AL
Sbjct: 126 FRRDGKYKDMAGHDINYIAVSGVLGMLGRAGEAPYPPGNILGDFAGGGAICFLGILLALL 185
Query: 171 ERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-G 229
R +GRGQV++ NMV+GSAYL + ++ + +W+ PRG N+LDGG +Y TYETKD G
Sbjct: 186 SRQTTGRGQVVNANMVDGSAYLATMPRLSRKSPMWNGPRGTNVLDGGCPYYGTYETKDPG 245
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEEL-PQHEVETG---------RAKLTEKFKEKTQAE 279
+ A+G LE QF+ LL GL ++ ++ P + + R+ +KFK+KT+ E
Sbjct: 246 NYFAIGPLEPQFFDALLRGLQLSPSDVFPPNSNKVREDPSNWPFMRSVFEKKFKQKTRKE 305
Query: 280 WCEIFDNTDACVTPVLSLSQ 299
W +FD TDAC TPVL++ +
Sbjct: 306 WEAVFDGTDACATPVLTMDE 325
>gi|409357529|ref|ZP_11235907.1| bile acid-inducible L-carnitine dehydratase protein F [Dietzia
alimentaria 72]
Length = 365
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 205/339 (60%), Gaps = 13/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY----GKKSLCINL 58
L GI V+E G+ P P M+L + GA V+ + + G D + G+ + +L
Sbjct: 9 LAGIRVVELNGIGPGPHACMMLADLGADVVTVMRPGELAKSVDGWAHVTRRGRTVVEADL 68
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A+GL +++L ++DV++E FR GV E++ LGPD + NPRL+YAR++G+GQ GP +
Sbjct: 69 KSAEGLEQVRSLIGKADVLVEGFRPGVTERMGLGPDDCLELNPRLVYARMTGWGQHGPLA 128
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+NY+ L+G L+ + P PP NL DFGGG + GI+ A+ ER+ SG+G
Sbjct: 129 QTAGHDLNYISLTGHLNATARKGERPVPPLNLVGDFGGGSMFLIQGILAAIIERATSGKG 188
Query: 179 QVIDCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
QVID M +G++ LG W R + W G N+LD G FYD Y DG+FMAVG
Sbjct: 189 QVIDAAMTDGASVLGQFQWAMRARGQ--WSDVAGTNMLDTGFPFYDVYTCSDGKFMAVGC 246
Query: 237 LESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE QFYA+ LG+ E +P Q + + R + KF EKT+ EW E+F TDAC T
Sbjct: 247 LEPQFYAEFARLLGIDGEGMPGQFDFDRWDELRDVIAGKFAEKTRDEWAEVFYGTDACTT 306
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL+ ++A HPHNV R +F+ + G + PAPAPR SRT
Sbjct: 307 PVLTYTEALDHPHNVARETFV-DVNGDMGPAPAPRFSRT 344
>gi|332525154|ref|ZP_08401331.1| L-carnitine dehydratase/bile acid-inducible protein F [Rubrivivax
benzoatilyticus JA2]
gi|332108440|gb|EGJ09664.1| L-carnitine dehydratase/bile acid-inducible protein F [Rubrivivax
benzoatilyticus JA2]
Length = 359
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 217/334 (64%), Gaps = 7/334 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EFAGL PAPF M+L + GA V+RI + G +P ++ + +L ++L+
Sbjct: 5 LAGLRVIEFAGLGPAPFAAMVLADLGAEVLRITRPGVEPDPREVTTRSRAALALDLRDPD 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + LA ++D+++E FR GVME+L LGPDV+ P L+Y R++G+GQDGP + AG
Sbjct: 65 GAAAALALAARADLLIEGFRPGVMERLGLGPDVVLARRPSLVYGRMTGWGQDGPLAQAAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDI+Y+ +SG L+ +G R P PP N DFGGG ++ +G++ AL E SGRGQV+D
Sbjct: 125 HDIDYIAISGALAAIGVPGRPPVPPANYLGDFGGGAMLLVVGLLAALHEARSSGRGQVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L +++ + LW +PRGEN+LDGGAHFY Y+ DG+ +AVGA+E QFY
Sbjct: 185 AAMCDGAALLSAFMVGWKAQGLWSRPRGENMLDGGAHFYACYDCADGKPIAVGAIEPQFY 244
Query: 243 AQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A+L G+ ++ + +++ GR KL F+ +T+AEWC + + TDAC PVL
Sbjct: 245 AELRRRAGL-DDPVFDAQLDAGRWPELKDKLAAVFRTRTRAEWCALLEGTDACFAPVLDW 303
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+A HPHN RG+++ GV+ PAPAPR SRT
Sbjct: 304 DEAPHHPHNAARGNWL-EAGGVMQPAPAPRFSRT 336
>gi|119183268|ref|XP_001242694.1| hypothetical protein CIMG_06590 [Coccidioides immitis RS]
gi|392865603|gb|EAS31402.2| alpha-methylacyl-CoA racemase [Coccidioides immitis RS]
Length = 396
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 207/320 (64%), Gaps = 21/320 (6%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQPF---VQDTVGYGK 51
+ L+G+ V+E AGLAP PF G++L ++GA+V+R+D+ ++P +D + K
Sbjct: 6 LPLQGVRVVELAGLAPGPFAGLLLADYGASVLRVDRPHPNAHSTSKPLPRPTKDALTRHK 65
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSG 110
S+ ++LK V+ +L +DV+++PFR GV+EKL L P VL K NPRLI AR++G
Sbjct: 66 TSISLDLKSPASKEVLLSLIRNADVLIDPFRPGVLEKLGLCPSTVLLKENPRLIVARMTG 125
Query: 111 YGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALF 170
+ +DG Y MAGHDINY+ +SG+L +LG P PP N+ DF GGG +C +GI++AL
Sbjct: 126 FRRDGKYKDMAGHDINYIAVSGVLGMLGRAGEAPYPPGNILGDFAGGGAICFVGILLALL 185
Query: 171 ERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-G 229
R +GRGQV++ NMV+GSAYL + ++ + +W+ PRG N+LDGG +Y TYETKD G
Sbjct: 186 SRQTTGRGQVVNANMVDGSAYLATMPRLSRKSPMWNGPRGTNVLDGGCPYYGTYETKDPG 245
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEEL-PQHEVETG---------RAKLTEKFKEKTQAE 279
+ A+G LE QF+ LL GL ++ ++ P + + R+ +KFKEKT+ E
Sbjct: 246 NYFAIGPLEPQFFDALLRGLQLSPSDVFPPNSNKVREDPSNWPFMRSIFEKKFKEKTRKE 305
Query: 280 WCEIFDNTDACVTPVLSLSQ 299
W +FD TDAC TPVL++ +
Sbjct: 306 WEAVFDGTDACATPVLTMDE 325
>gi|424861105|ref|ZP_18285051.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus
opacus PD630]
gi|356659577|gb|EHI39941.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus
opacus PD630]
Length = 361
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 208/363 (57%), Gaps = 13/363 (3%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFVQDTVGYGKKSLCINLKKA 61
+ ++E AG+ P+P M+L + GA V+R+++ G P +D ++S+ +LK
Sbjct: 1 MKIVELAGIGPSPHAAMLLADLGAEVVRVERPGGVTQLLPVDKDAGLRNRRSVSADLKDP 60
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
L+ + L +++D+++E +R G E+L +GPDV + NPRL+YAR++G+GQDGP + A
Sbjct: 61 ADLAKVLKLVDKADILIEGYRPGAAERLGIGPDVCRERNPRLVYARITGWGQDGPLAPYA 120
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL LSG L+ +G P P NL AD GGG + +GI+ AL+ R+++G G V+
Sbjct: 121 GHDINYLALSGALNAIGREGERPLAPLNLVADLGGGSMQAVMGILGALYARAQTGVGDVV 180
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+G + L + + LW RG N++DGGA FYDTY DGR++AVGA+E F
Sbjct: 181 DIAMVDGVSALMTMFWTLTENGLWSDRRGTNVIDGGAPFYDTYGCADGRYIAVGAVEPVF 240
Query: 242 YAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
YAQLL GLG+ LP E+ R E F + + W + F DACVTPVLSL
Sbjct: 241 YAQLLEGLGLDPAGLPDQYDESAWPTLRKNFAEVFATRDRDSWVQAFARLDACVTPVLSL 300
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP-APGVHTREVLRHFG 356
+ HPH R + + + G PA APR + T P PG T V R +G
Sbjct: 301 DEVPDHPHISARNTIV-SAFGQRQPAAAPRFA---SAHDATYDAPRMPGADTEAVFRDWG 356
Query: 357 YSD 359
D
Sbjct: 357 VDD 359
>gi|345852479|ref|ZP_08805418.1| fatty acid-CoA racemase [Streptomyces zinciresistens K42]
gi|345636052|gb|EGX57620.1| fatty acid-CoA racemase [Streptomyces zinciresistens K42]
Length = 376
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 209/366 (57%), Gaps = 14/366 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTV----GYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+++ G DT K+S+ I+L
Sbjct: 10 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVERPGGPGLAIDTAYDVTNRNKRSVVIDL 69
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +LA ++D+++E R GV E+L +GP+ NPRL+Y R++G+GQ+GP +
Sbjct: 70 KSPGGPARVLDLAARADILIEGNRPGVAERLGVGPEACRARNPRLVYGRMTGWGQEGPLA 129
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L + G R P P NL D+ GG L +G++ AL +G G
Sbjct: 130 HRAGHDIAYIALTGTLGMTGEPGRPPAVPANLVGDYAGGSLYLVVGVLAALHHARATGTG 189
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG +Y TYET DG FMAVGALE
Sbjct: 190 QVVDAAIVDGTAHLAAMIHGMLAAGRWQDRRGANLLDGGCPYYGTYETADGGFMAVGALE 249
Query: 239 SQFYAQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FY + L LG+ E P + R + +F+ +T+ W +FD +DACV PV
Sbjct: 250 PRFYDEFLTLLGVEGFAGAREDPA-RWDALREAVAARFRSRTRDAWTAVFDGSDACVAPV 308
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLR 353
LSL +A HPH RG+F G+ PAPAPR S TP + PA PG T V R
Sbjct: 309 LSLREAPHHPHLAARGTFT-GHGGITQPAPAPRFSATPTAVRT---GPARPGADTAGVAR 364
Query: 354 HFGYSD 359
+ D
Sbjct: 365 DWDVPD 370
>gi|288924215|ref|ZP_06418249.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EUN1f]
gi|288344440|gb|EFC78935.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EUN1f]
Length = 373
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 202/331 (61%), Gaps = 13/331 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA---QPFVQDTVGYGKKSLCINLK 59
L G+ VLE AG+ P P MIL + GA V+R+D+ + +P ++ G++S+ +LK
Sbjct: 4 LTGLRVLELAGIGPGPHAAMILADLGADVVRVDRPASTEREPLLR-----GRRSVIADLK 58
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G ++ L ++D+++E +R GV E+L +GP NPRLIY R++G+GQDGP++
Sbjct: 59 TDAGRELVLRLVAKADILIEGYRPGVAERLGVGPAECQAVNPRLIYGRMTGWGQDGPWAR 118
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+GIL +G P PP NLA DFGGG + G++ AL+ER +SG GQ
Sbjct: 119 QAGHDINYISLTGILHAVGRAGERPVPPLNLAGDFGGGSMFLITGVLAALWERERSGLGQ 178
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
VID MV+G++ L + + W RG NLLDG A FYDTYE DG +AVG +E
Sbjct: 179 VIDAAMVDGASVLAQMMWSMRSLGGWTDDRGANLLDGAAPFYDTYECADGGHVAVGCIEP 238
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYAQ+LA LG+ LP G RA L + F+ + W ++FD +DACVTPVL
Sbjct: 239 QFYAQMLALLGLDAAALPDQYDRAGWPTLRATLADAFRAHPRDHWAKVFDGSDACVTPVL 298
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAP 326
S +A HPH RG+ + + G PAPAP
Sbjct: 299 SWGEAIEHPHLAARGTLL-DLHGAPQPAPAP 328
>gi|310794431|gb|EFQ29892.1| CoA-transferase family III [Glomerella graminicola M1.001]
Length = 401
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/307 (47%), Positives = 200/307 (65%), Gaps = 10/307 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQ-PF-VQDTVGYGKKSLCINL 58
L GI VLEFAGLAP PF GM+L + GA+VIR+D+ G++ P D + K S+ ++L
Sbjct: 7 LVGIKVLEFAGLAPGPFAGMLLADAGASVIRVDRALEGSRTPLPTADMLVRRKASVTVDL 66
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G++ +K LA ++DV+++PFR GV+EKL LGP+VL ++N L+Y R++G+ +DG Y
Sbjct: 67 KSPGGIAFVKRLAAEADVLIDPFRPGVLEKLGLGPEVLRRANRGLVYGRMTGFRRDGRYR 126
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS-KSGR 177
MAGHDINYL +SG+L LLG P PP N+ ADF GGG + GI+MAL R+ G
Sbjct: 127 DMAGHDINYLAVSGVLGLLGREGEKPHPPWNILADFAGGGAVLFQGILMALLARAGNGGT 186
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV++ NMV+GS+YL ++ L RG N+LDGG +YDTYETKDG+++AVGAL
Sbjct: 187 GQVVEANMVDGSSYLATFPRFALKNTLGGNGRGRNMLDGGCPYYDTYETKDGKYVAVGAL 246
Query: 238 ESQFYAQLLAGLGMT-----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QF+ L+ GLG+ E + R T FK +T++EW +FD TDAC T
Sbjct: 247 EPQFFRALMKGLGLAGKGWEENRFDRERWGELREIFTNTFKGRTRSEWEAVFDGTDACCT 306
Query: 293 PVLSLSQ 299
PVL +
Sbjct: 307 PVLEYHE 313
>gi|116694343|ref|YP_728554.1| Acyl-CoA transferase [Ralstonia eutropha H16]
gi|113528842|emb|CAJ95189.1| Acyl-CoA transferase [Ralstonia eutropha H16]
Length = 392
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 203/339 (59%), Gaps = 11/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L GI ++E AG+ P P GM+L + GA V+RI++ G + D + +KSL +
Sbjct: 13 LAGIRIIELAGIGPGPLAGMMLADMGAEVLRIERPGEVDLGVKRERRYDLMLRNRKSLVL 72
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ + L ++D ++E FR GV E++ LGPD NPRL+Y R++G+GQ GP
Sbjct: 73 DLKDPEAVATVLELVEKADALIEGFRPGVTERMGLGPDACMGRNPRLVYGRVTGWGQSGP 132
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++ AGHD+NY+ L+G L+ +G R P P DF GGG+ G++ AL E KSG
Sbjct: 133 LANAAGHDVNYIALTGALNAIGQRGGPPAIPPAYLGDFAGGGMFLVAGVLAALIEAGKSG 192
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+G+A LG+ W RG N+LD GAHFY+ Y KDG +++VG
Sbjct: 193 KGQVVDAAIVDGAAALGAVFFGLAAAGQWRPERGTNVLDSGAHFYNVYACKDGGWISVGP 252
Query: 237 LESQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E++FY LL+ +G+ L E G A L E F+ +T+ EWC + D TDAC
Sbjct: 253 VEARFYRDLLSRIGVDPASLGDQNDPANWEAGSAALAEVFRTRTRDEWCALLDGTDACFA 312
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL+ +A HPH RG+F+ G++ PAPAPR SRT
Sbjct: 313 PVLNYHEAPHHPHLRARGTFV-EVDGIMHPAPAPRFSRT 350
>gi|296817077|ref|XP_002848875.1| alpha-methylacyl-CoA racemase [Arthroderma otae CBS 113480]
gi|238839328|gb|EEQ28990.1| alpha-methylacyl-CoA racemase [Arthroderma otae CBS 113480]
Length = 389
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 200/317 (63%), Gaps = 28/317 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---------HGAQPFVQDTVGYGKKS 53
L+GI V+E AGLAP PF G++L ++GA+V+R+D+ A P D + K S
Sbjct: 8 LQGIRVVELAGLAPGPFAGLMLGDYGASVVRVDRPHPNAHSQSKPAPPPTFDALTRHKTS 67
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYG 112
+ ++LK +V+ L +++DV+++P+R GV+EKL L P VL K N RLI AR++G+
Sbjct: 68 ISLDLKNPDSKAVLLFLLSKADVLIDPYRPGVLEKLGLCPTTVLLKHNSRLIVARMTGFR 127
Query: 113 QDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
+DG Y MAGHDINY+ +SG+LSLLG P PP N+ DF GGG +C GI++AL R
Sbjct: 128 RDGKYKDMAGHDINYIAVSGVLSLLGREGEKPYPPGNILGDFAGGGAVCFQGILLALLAR 187
Query: 173 SKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFM 232
+G+GQV++ NMV+GSAYL ++ + + +WD PRG N+LDGG +Y TYETKD
Sbjct: 188 QATGKGQVVNANMVDGSAYLATFPRLARQSPMWDGPRGSNVLDGGCPYYATYETKDK--- 244
Query: 233 AVGALESQFYAQLLAGLGMTEEEL----------PQHEVETGRAKLTEKFKEKTQAEWCE 282
ESQFY L GLG+ E++L + RA L KFKEKT++EW
Sbjct: 245 -----ESQFYTAFLQGLGLEEKDLFPLGSNMERQDRDNWPYMRAVLERKFKEKTRSEWAA 299
Query: 283 IFDNTDACVTPVLSLSQ 299
IFD TDAC TPVL++ +
Sbjct: 300 IFDGTDACATPVLTMDE 316
>gi|424865062|ref|ZP_18288945.1| alpha-methylacyl-CoA racemase [SAR86 cluster bacterium SAR86B]
gi|400759049|gb|EJP73241.1| alpha-methylacyl-CoA racemase [SAR86 cluster bacterium SAR86B]
Length = 367
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 218/361 (60%), Gaps = 13/361 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRI----DKHGAQPFVQDTVGYGKKSLCINL 58
LKG+TVLEF+G+ P P+CGM+L + GA VIR+ DK F D K+S+ +L
Sbjct: 4 LKGVTVLEFSGIGPGPYCGMLLADMGADVIRLSRINDKDSHNKF--DIHNRSKRSIVADL 61
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + +S + L + D++ E FR GVMEKL LGPD K N L+Y R++G+GQDGP S
Sbjct: 62 KNPESISEILKLISSVDILFEGFRPGVMEKLGLGPDECFKLNKSLVYGRMTGWGQDGPMS 121
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+ AGHDINY+GLSG L +G + NP P NL D+GGGG+M A+GI+ A K+G+G
Sbjct: 122 NTAGHDINYIGLSGALHSIGKNDSNPVIPLNLIGDYGGGGMMLAMGILAAHINSIKTGKG 181
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D M++GS L S+ ++ W R NLLDG AHFY+TY+ D +++AVG++E
Sbjct: 182 QVVDSAMIDGSLSLMSFFYSLKEMGYWKNERESNLLDGAAHFYNTYKCSDNKYIAVGSIE 241
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPV 294
QFY+ LL L + + + + ++L E K K K ++ W +F +TD CVTP+
Sbjct: 242 PQFYSILLEKLELNDPKFKDQMKQETWSELKELIASKIKTKPRSHWENVFSDTDGCVTPI 301
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
L++ +A +PHN+ R +FI G PAPAPR S T I ++ G E+ +
Sbjct: 302 LNMDEAKENPHNIARKAFI-EIDGFKQPAPAPRFSNDKPT--IKHNSKKVGSDIDEICKE 358
Query: 355 F 355
F
Sbjct: 359 F 359
>gi|379760294|ref|YP_005346691.1| far [Mycobacterium intracellulare MOTT-64]
gi|378808236|gb|AFC52370.1| far [Mycobacterium intracellulare MOTT-64]
Length = 359
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 206/338 (60%), Gaps = 11/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E G+ P P GM+L + GA V+R+ + + +D + GK+ + +++
Sbjct: 6 LAGVRVIELGGIGPGPHAGMLLADLGADVVRVRRPSGGLEMPAEGRDLLHRGKRIVDLDV 65
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + L ++DV+L+ FR G E+L +GPD +NPRLI+AR++G+GQDGP +
Sbjct: 66 KTQP--QALLELTAKADVLLDCFRPGTCERLGIGPDDCAAANPRLIFARITGWGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL +G LS LG+ +R P PP NL ADFGGG ++ GI +AL+ER +SG+G
Sbjct: 124 RTAGHDINYLSQTGALSALGYADRPPIPPLNLVADFGGGSMLVVFGIAVALYERERSGKG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+G + L + + T R LLDGGA FY YET G ++AVGA+E
Sbjct: 184 QVIDAAMVDGVSLLAQMMWTMKSTGALRDRRQSFLLDGGAPFYGCYETAAGGYVAVGAIE 243
Query: 239 SQFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+A LLAGLG++ E++P + R T++F +T+ EW F TDACVTPV
Sbjct: 244 PQFFAALLAGLGLSPEDVPGQLDKDSYPRMREIFTKRFASRTRDEWARTFAGTDACVTPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
L+ ++A + H R + I GV APAPR SRTP
Sbjct: 304 LTWTEAATDDHLRTRSTVI-TAHGVDQAAPAPRFSRTP 340
>gi|71905899|ref|YP_283486.1| L-carnitine dehydratase/bile acid-inducible protein F
[Dechloromonas aromatica RCB]
gi|71845520|gb|AAZ45016.1| L-carnitine dehydratase/bile acid-inducible protein F
[Dechloromonas aromatica RCB]
Length = 392
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 166/385 (43%), Positives = 221/385 (57%), Gaps = 21/385 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG--------YGKKSL 54
L GI V+EFAG+ P PFCGM+L + GA V +++ G F G GKKSL
Sbjct: 13 LAGIKVIEFAGIGPGPFCGMLLADMGAEVTLLERAGGT-FASQLFGGGRKAVANRGKKSL 71
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
CI+LK + +++ L ++DV++E FR GVME+L GP V NPRLIY R++G+GQ
Sbjct: 72 CIDLKHPEAKNLVFKLIAEADVLIEGFRPGVMERLGYGPKVCLSLNPRLIYGRMTGWGQT 131
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHD NY ++G+L P P L D GGGGLM A GI AL E +
Sbjct: 132 GPLAPRAGHDANYAAIAGVLDTGRRHGGAPWAPPTLVGDMGGGGLMLAWGIACALLEAQR 191
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
SG+GQVID M EG+A L L + W+ G +D A FYD YE DG +++V
Sbjct: 192 SGKGQVIDAAMCEGAAVLAHGLFNLEALGEWE---GHCAIDSSAPFYDVYECADGLWISV 248
Query: 235 GALESQFYAQLLAGLGM------TEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTD 288
LE QFYA + LG+ T ++ + + +L E FK + + W +FD+TD
Sbjct: 249 CPLEPQFYATFVERLGLSGDPDFTGQQYDKTRWPLMQQRLVEIFKREPRKHWEALFDDTD 308
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
CV PVLS+ +A +HPHN+ R +F+ + AGV PAPAPRLSRTPG I P G H+
Sbjct: 309 DCVWPVLSMKEAPAHPHNLDREAFV-DVAGVRQPAPAPRLSRTPGA--IQAPPPLLGEHS 365
Query: 349 REVLRHFGYSDANIEELIREDVIEE 373
REVL G SD +E+L V+ E
Sbjct: 366 REVLTSLGLSDVEVEQLAANGVVSE 390
>gi|406029179|ref|YP_006728070.1| alpha-methylacyl-CoA racemase [Mycobacterium indicus pranii MTCC
9506]
gi|405127726|gb|AFS12981.1| Alpha-methylacyl-CoA racemase [Mycobacterium indicus pranii MTCC
9506]
Length = 359
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 206/338 (60%), Gaps = 11/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E G+ P P GM+L + GA V+R+ + + +D + GK+ + +++
Sbjct: 6 LAGVRVIELGGIGPGPHAGMLLADLGADVVRVRRPSGGLEMPAEGRDLLHRGKRIVDLDV 65
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + L ++DV+L+ FR G E+L +GPD +NPRLI+AR++G+GQDGP +
Sbjct: 66 KTQP--QALLELTAKADVLLDCFRPGTCERLGIGPDDCAAANPRLIFARITGWGQDGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL +G LS LG+ +R P PP NL ADFGGG ++ GI +AL+ER +SG+G
Sbjct: 124 RTAGHDINYLSQTGALSALGYADRPPIPPLNLVADFGGGSMLVVFGIAVALYERERSGKG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+G + L + + T R LLDGGA FY YET DG ++AVGA+E
Sbjct: 184 QVIDAAMVDGVSLLAQMMWTMKSTGALRDRRQSFLLDGGAPFYGCYETADGGYVAVGAIE 243
Query: 239 SQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+A LL GLG++ E++P+ R T++F +T+ +W F TDACVTPV
Sbjct: 244 PQFFAALLDGLGLSPEDVPRQLDKDSYPRMREIFTKRFASRTRDQWARTFAGTDACVTPV 303
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
L+ ++A + H R + I GV APAPR SRTP
Sbjct: 304 LTWTEAATDDHLRTRSTVI-TAHGVDQAAPAPRFSRTP 340
>gi|110635611|ref|YP_675819.1| L-carnitine dehydratase/bile acid-inducible protein F
[Chelativorans sp. BNC1]
gi|110286595|gb|ABG64654.1| L-carnitine dehydratase/bile acid-inducible protein F
[Chelativorans sp. BNC1]
Length = 378
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 204/344 (59%), Gaps = 22/344 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L G V+EFAG+ P P M++ + GATV+RID+ +P + + S+ +
Sbjct: 4 LAGFKVVEFAGVGPGPMAAMLIADLGATVLRIDRAKPVELGRPRPLKYNLPLRNRHSIAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + +L ++D ++E FR G ME+L LGPD K NPRLIY R++G+GQDGP
Sbjct: 64 DLKNPDAVRFALSLVAKADALIEGFRPGAMERLGLGPDECLKMNPRLIYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+ L+G L+ +G R++ P+ P N DFGGG L A GI+ A++E +SG
Sbjct: 124 LAKTAGHDINYIALAGALNAIGRRDQPPSIPLNFVGDFGGGALYLAFGIMAAVYEAQRSG 183
Query: 177 RGQVIDCNMVEGSA-----YLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
+GQV+D +V+G A Y G LT T PRG D G+HFYD+Y+ DG++
Sbjct: 184 KGQVVDAAIVDGVASMMVNYCG--LTAAGLT----SPRGTGPTDSGSHFYDSYQCADGKW 237
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNT 287
++VGA+E +FY QLL+ LG+ LP G + +L E F KTQAEWC + + T
Sbjct: 238 VSVGAIEKRFYKQLLSILGLDPVTLPDQWDREGWPTMKQRLAEIFSTKTQAEWCALLEGT 297
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
DAC PVL + HPH R ++I VV PAPAPR SR+
Sbjct: 298 DACFAPVLEVGDLMQHPHLKARKTYI-KVDDVVQPAPAPRFSRS 340
>gi|86741941|ref|YP_482341.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
CcI3]
gi|86568803|gb|ABD12612.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
CcI3]
Length = 340
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 208/338 (61%), Gaps = 10/338 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG--AQPFVQDTV-GYGKKSLCIN 57
M L G+ V+E A + PAPFCGM+L + GA V+R+++ G A + + V G++++ ++
Sbjct: 2 MPLDGLRVVELAAIGPAPFCGMMLADLGADVLRVERPGGPADAWGRSPVLDRGRRTVTLD 61
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK A ++ +L +DV LE FR GV E+L LGP NPRL+Y R++G+GQ+GPY
Sbjct: 62 LKDAGQVAQALDLVADADVFLEGFRPGVAERLGLGPRECLARNPRLVYGRMTGWGQNGPY 121
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI YL +SG L +G P PP N+ DFGGGG++ A G++ +F ++GR
Sbjct: 122 AHTAGHDITYLAVSGALHAIGRAGERPVPPVNMLGDFGGGGMLLAFGVLAGVFHARRTGR 181
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D ++V+G+A L + W RG NLLDGGA FYDTY +DG ++AVGAL
Sbjct: 182 GQVVDASIVDGAALLTGMVHGFLAEGSWRDDRGVNLLDGGAPFYDTYVCQDGGYVAVGAL 241
Query: 238 ESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
E +F+ L+ LG+ + + L + RA+LTE F ++ + EW +F +T+ CV
Sbjct: 242 ERKFFRALVQRLGLEDDPAFHGDHLDRARWPAIRARLTETFAKRPRDEWHVLFRDTECCV 301
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS 329
PVLSL++A + HNV RG F GV P PAPR
Sbjct: 302 APVLSLAEAAADEHNVARGVF-RELDGVRHPQPAPRFG 338
>gi|331699207|ref|YP_004335446.1| alpha-methylacyl-CoA racemase [Pseudonocardia dioxanivorans CB1190]
gi|326953896|gb|AEA27593.1| Alpha-methylacyl-CoA racemase [Pseudonocardia dioxanivorans CB1190]
Length = 362
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 10/344 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L G+ V+E AG+ P P MIL + GA V+RID+ G D V G++ + +LK
Sbjct: 6 LAGLRVVELAGIGPGPHAAMILADLGADVVRIDRPGGLQIGDSDADVVQRGRRRVVADLK 65
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G + L +D+++E +R GV E+L +GPDV + NPRL+Y R++G+GQ+GP +
Sbjct: 66 DPAGRETVLRLVEHADLLIEGYRPGVTERLGVGPDVCLQRNPRLVYGRVTGWGQEGPLAD 125
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G L +G P PP NL DFGGG ++ +G++ AL+E SG+GQ
Sbjct: 126 RAGHDINYISLTGALHAIGREGERPVPPLNLVGDFGGGSMLLLVGVLAALWEAKGSGKGQ 185
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLW-DKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D MV+G++ L + LW D+P N+LDG A FYDTY DGR +AVGA+E
Sbjct: 186 VVDAAMVDGASILVQMVWSLLGQRLWLDRPS-SNMLDGHAPFYDTYTCADGRHVAVGAIE 244
Query: 239 SQFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFYA LL GLG+T +ELP + A+ E F +T+ EW ++F TDACVTPV
Sbjct: 245 PQFYAALLDGLGLTADELPPQLDRDSWPAVHARFAEIFATRTRDEWADVFAATDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
L+ ++A HPH R + I R GV A APR SRTPG + T
Sbjct: 305 LTFAEAAQHPHVTARETII-ERNGVPQAAAAPRFSRTPGEAGAT 347
>gi|315506310|ref|YP_004085197.1| l-carnitine dehydratase/bile acid-inducible protein f
[Micromonospora sp. L5]
gi|315412929|gb|ADU11046.1| L-carnitine dehydratase/bile acid-inducible protein F
[Micromonospora sp. L5]
Length = 398
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 223/391 (57%), Gaps = 26/391 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L G+ V+E AG+ P PF M+L + GA V+R+D+ G F D + ++S+ ++LK
Sbjct: 11 LTGVRVIELAGIGPGPFASMMLADLGADVVRVDRPGGGGFGAFPGDLLNRNRRSIAVDLK 70
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ +G ++ +L +D ++E FR GV E+L LGPD +NP+L+Y R++G+GQDGP +
Sbjct: 71 QPEGRDLVLDLVAGADALVEGFRPGVTERLGLGPDDCLAANPKLVYGRMTGWGQDGPLAQ 130
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDI+YL L+G L +G P PP NL D+GGGG+M ALG+V AL+ GQ
Sbjct: 131 RAGHDIDYLALTGALHGVGRAGERPVPPMNLLGDYGGGGMMLALGVVAALYAVRGGAPGQ 190
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+G + L + + + LW PRG NLLDGGA FYDTYE DGR++AVGALE
Sbjct: 191 VVDAAIVDGVSVLATQIHALRGIGLWQDPRGVNLLDGGAPFYDTYECADGRYVAVGALEP 250
Query: 240 QFYAQL--LAGLGMTEEELPQHEVETG----------------RAKLTEKFKEKTQAEWC 281
QFYA+L L G + PQ RA F+ +T+ EW
Sbjct: 251 QFYAELVRLTGFPPDGGDGPQDAGAAAGGEALDRDDPANWPALRAAWARLFRTRTRDEWT 310
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFI-PNRAGVVAPAPAPRLSRTPGTSKITEH 340
E+ TDACV PVL ++A HPH R F+ P+ GV PAPAPR S TP + +
Sbjct: 311 ELLGGTDACVAPVLDWAEAPEHPHLRAREVFVAPD--GVTQPAPAPRFSATP--TSVRRP 366
Query: 341 NPAPGVHTREVLRHFGYSDANIEELIREDVI 371
P+PG HT EVL G I L VI
Sbjct: 367 PPSPGEHTDEVLAGAGIDAGRIAALRAAGVI 397
>gi|407985100|ref|ZP_11165701.1| coA-transferase III family protein [Mycobacterium hassiacum DSM
44199]
gi|407373179|gb|EKF22194.1| coA-transferase III family protein [Mycobacterium hassiacum DSM
44199]
Length = 350
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 210/336 (62%), Gaps = 14/336 (4%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLKKAK 62
+ V+E G+ P P M+L + GA V+R+ + G D + GK+ + +++KK
Sbjct: 1 MKVIELGGIGPGPHAAMVLADLGADVVRVRRPGGLQIPAEHLDLLHRGKRVVDLDVKKDP 60
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ + LA ++DV+++ FR G E+L +GPD NPRLIYAR++G+GQ GP + AG
Sbjct: 61 --AALLELAAKADVLIDGFRPGTCERLGIGPDECTAVNPRLIYARITGWGQHGPLARTAG 118
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYL +G+L+ +G+R+R P P NL ADFGGG ++ LGIV AL+ER +SGRGQVID
Sbjct: 119 HDINYLSQTGVLAAIGYRDRPPVAPLNLVADFGGGSMLVLLGIVSALYERERSGRGQVID 178
Query: 183 CNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
MV+G + L +W ++ T R +LDGGA FY TYET DG+++AVGA+E Q
Sbjct: 179 AAMVDGVSLLAQMAWTMKSVGTL--KDERESFMLDGGAPFYRTYETADGKYVAVGAIEPQ 236
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLS 296
F+AQLL GLG+ +E+ +G ++ E+F KT+ EW IF TDACVTPVL+
Sbjct: 237 FFAQLLDGLGLDPDEVGPQLDRSGYPRMQRLFAERFASKTRDEWMAIFAGTDACVTPVLT 296
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
S+A H R + + GV+ APAPR SRTP
Sbjct: 297 WSEAAESEHLRARSTLV-QANGVLQAAPAPRFSRTP 331
>gi|385675251|ref|ZP_10049179.1| putative acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
sp. ATCC 39116]
Length = 337
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 214/335 (63%), Gaps = 14/335 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD--TVGYGKKSLCINLKK 60
L G+ V+EFAGL PAPF M+L + GA V+RID+ G+ +D + G+++L ++LK
Sbjct: 4 LNGLRVVEFAGLGPAPFAAMMLADAGAEVVRIDRPGSD---RDGGILDRGRRTLHLDLKA 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
GL+ + L +DV++E FR GVME+L LGP + NPRL+Y R++G+GQDGP ++
Sbjct: 61 DDGLTRARELITSADVLIEGFRPGVMERLGLGPRACAELNPRLVYGRMTGWGQDGPLAAK 120
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINYL ++G L + R + P PP NL D+GGGG++ A G++ AL ER +GRGQV
Sbjct: 121 AGHDINYLAVTGALRSIARRGQAPVPPLNLVGDYGGGGMLLAFGLLAALRERDATGRGQV 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D MV+G++ L S + + W G N +D GA FYD YET DG ++AVG++E Q
Sbjct: 181 VDAAMVDGASLLMSGIWQRVADGRWQPEPGTNDIDTGAPFYDVYETADGEYLAVGSMEPQ 240
Query: 241 FYAQLLAGLGMTEEELP-QHEVETGRAK---LTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY +L+ LG+ +LP Q + E+ A E F +T+AEW +F+ DACVTPVLS
Sbjct: 241 FYERLVRALGLDPAQLPDQWDRESWPATKKLFAEIFAGRTRAEWAAVFEPLDACVTPVLS 300
Query: 297 LSQATSHPHNVHRGSF--IPNRAGVVAPAPAPRLS 329
+++A + H R + NR V PAPAPR+S
Sbjct: 301 MAEAAADEHLAARSTLRVCGNR---VEPAPAPRIS 332
>gi|78060233|ref|YP_366808.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
gi|77964783|gb|ABB06164.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
Length = 369
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 217/364 (59%), Gaps = 13/364 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQDTVGYGKKSLCINLKKA 61
L G+ V+EFAGL P P GM+L + GA V+ ID+ A GK+S+ ++LK+
Sbjct: 11 LAGLKVIEFAGLGPGPLAGMLLADLGADVVCIDRPAEAAGRFAGVSSRGKRSVVLDLKRE 70
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G + + LA ++D+++E +R GVME+L LGP+ L NPRLIY R++G+GQ GP + A
Sbjct: 71 DGRAAARALAARADMLIEGYRPGVMERLGLGPEALLALNPRLIYGRITGWGQTGPLAQAA 130
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ L+G L+ +G R P PP NL DFGGG + G++ AL ER SGRGQV+
Sbjct: 131 GHDLNYIALTGALAAIGPRAGKPVPPLNLVGDFGGGTMFLLFGLLAALVERQASGRGQVV 190
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M++G+ L + + LW RG NLLDGGAHFY TY DG ++++G++E F
Sbjct: 191 DAAMIDGALALLGPILELRAQGLWRDGRGSNLLDGGAHFYGTYRCADGAYISIGSIEPAF 250
Query: 242 YAQLLAGLGMTEEELPQHEVETGRAK---LTEK----FKEKTQAEWCEIFDNTDACVTPV 294
YA L LG++++ P + + A L+E+ F KT+ EW + + TD C PV
Sbjct: 251 YALLREKLGISDD--PAFDAQMNAADWPALSERMEAIFLTKTRDEWTSLLEGTDVCFAPV 308
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
L +A +HPHN+ R S I AGV PAPAPR SRTP ++ P G T V
Sbjct: 309 LDFDEAAAHPHNLARTSHI-TVAGVRQPAPAPRFSRTP--AQTPAGPPVIGGDTDTVFSD 365
Query: 355 FGYS 358
+G +
Sbjct: 366 WGVA 369
>gi|302382788|ref|YP_003818611.1| L-carnitine dehydratase/bile acid-inducible protein F
[Brevundimonas subvibrioides ATCC 15264]
gi|302193416|gb|ADL00988.1| L-carnitine dehydratase/bile acid-inducible protein F
[Brevundimonas subvibrioides ATCC 15264]
Length = 369
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 198/339 (58%), Gaps = 9/339 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG-----YGKKSLCIN 57
L G+ ++EF + P P MIL + G VIR+ + V D +G + + ++
Sbjct: 6 LAGLRIVEFDAIGPVPLACMILADLGCEVIRVARPAGAARVWDDIGGTVLHRNRTHVEVD 65
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK+ + + + +L ++D ++E FR GVME+L LGPDV ++NP+L + R++G+GQ GP
Sbjct: 66 LKREEDRAAVLDLIARADAVMEGFRPGVMERLGLGPDVCLEANPKLAFVRMTGWGQTGPL 125
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ L+G L +G +R P PP N D+GGG + +G++ A+ +GR
Sbjct: 126 APRAGHDINYIALTGALHAMGEADRPPVPPLNYLGDYGGGAMFAVVGLLSAVMSARATGR 185
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQ +D MVEG+A L S + LW+ RG NL+DGGA FY Y DG +AVGAL
Sbjct: 186 GQTVDVAMVEGTAVLSSMFHAMIASGLWNDQRGSNLIDGGAPFYRCYACADGGHVAVGAL 245
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E QF+A LL GLG+ + QH+ +A F +++ W E+F+ DACV+PV
Sbjct: 246 EPQFFALLLDGLGIARDRFSQHDRSIWPEMQAAFEAAFAGRSRNAWAEVFEGVDACVSPV 305
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
LS ++A HPHN RG F P V PAPAPR S G
Sbjct: 306 LSFAEAADHPHNRDRGVF-PTVNAVRQPAPAPRFSDGEG 343
>gi|400537848|ref|ZP_10801370.1| far [Mycobacterium colombiense CECT 3035]
gi|400328892|gb|EJO86403.1| far [Mycobacterium colombiense CECT 3035]
Length = 360
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 208/338 (61%), Gaps = 11/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E G+ P P GM+L + GA V+R+ + + +D + GK+ + +++
Sbjct: 7 LAGVRVIELGGIGPGPHAGMLLADLGADVVRVRRPMGGLTMPAEGRDLLHRGKRIVDLDV 66
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + NLA ++DV+L+ FR G E+L +GP+ NPRLI+AR++G+GQDGP +
Sbjct: 67 KTQP--QALLNLAAKADVLLDCFRPGTCERLGIGPEDCAAVNPRLIFARITGWGQDGPLA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINYL +G LS LG+ +R P P NL ADFGGG ++ +GI AL+ER +SG G
Sbjct: 125 PTAGHDINYLSRTGALSALGYADRPPMAPLNLVADFGGGSMLVVIGIAAALYERERSGAG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+G + L + + T R LLDGGA FY Y T DG+++AVGA+E
Sbjct: 185 QVIDAAMVDGVSLLAQMMWTMKSTGALRDRRESFLLDGGAPFYGCYATADGQYVAVGAIE 244
Query: 239 SQFYAQLLAGLGMTEEELP-QHEVET---GRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+A LLAGLG++ +++P QH+ + R T +F +T+ EW + F TDACVTPV
Sbjct: 245 PQFFAALLAGLGLSPDDVPAQHDKASYPRMREVFTRRFASRTRDEWAQTFAGTDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
L+ S+A + H R + I G APAPR SRTP
Sbjct: 305 LTWSEAAADEHLRARSTVI-TAHGADQAAPAPRFSRTP 341
>gi|71023757|ref|XP_762108.1| hypothetical protein UM05961.1 [Ustilago maydis 521]
gi|46101492|gb|EAK86725.1| hypothetical protein UM05961.1 [Ustilago maydis 521]
Length = 439
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/417 (39%), Positives = 237/417 (56%), Gaps = 55/417 (13%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
+ L GI V+EF+GLAP PF GM+L +FGA VIRIDK G D++ GK+S ++ K
Sbjct: 20 LPLAGIKVVEFSGLAPGPFVGMVLADFGANVIRIDKTGTG-LNPDSLCRGKRSFAVSPKS 78
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPR-LIYARLSGYGQDGPYSS 119
A G +++ L +D++++PFR GV+E+L LGP K + LI+ARL+G+ + GPY++
Sbjct: 79 ADGHALITQLIRSADIVIDPFRPGVLERLGLGPQDFDKEIKKGLIFARLTGFQRTGPYAN 138
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINY+ LSG+LS+LG P PP NL DF GG ++C LGI++AL ER +S +GQ
Sbjct: 139 MAGHDINYIALSGVLSMLGNAGGKPQPPSNLLGDFAGGSMICLLGILLALVERVRSSQGQ 198
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFL----W--------DKPRGENLLDGGAHFYDTYETK 227
+++ +MV G+ Y+ S++ + ++L W D+ RG N LDGGA +Y Y K
Sbjct: 199 IVEADMVTGARYVSSFVLLS--SYLSHPSWGAIHSDGTDQTRGCNTLDGGAPWYGVYACK 256
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELP----------QHEVETG---RAKLTEKFKE 274
DG +M+VGA+E QFY +LL L + P QH+ +T + + F +
Sbjct: 257 DGGYMSVGAIEPQFYKELLDILRKVLPQAPQGTQHPSASTQHDRDTWPELQRYFSACFAQ 316
Query: 275 KTQAEWCEIFDNTDACVTPVLSLSQA-------TSHPHNVHRGSFIPNRAGVVAPAPAPR 327
++ W F TDAC PVL+ +A + NV G+ V P+PAPR
Sbjct: 317 LPRSVWERHFIRTDACTVPVLTRDEAALSGVLPAASAENVSDGN-------PVIPSPAPR 369
Query: 328 LSRTPGT-----------SKITEHNPAPGVHTREVLRHFGYSDANIE-ELIREDVIE 372
L+RTP S+ E PG HT ++L G SDAN EL R D I+
Sbjct: 370 LTRTPAKPPSGSAGGEWESEGAEMLLTPGEHTDDILLELGISDANKRIELYRTDAID 426
>gi|418291860|ref|ZP_12903819.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379063302|gb|EHY76045.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 360
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 208/340 (61%), Gaps = 5/340 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
LKG+ VLEFAG+ P P C M+L + GA V+RI++ G + V G+K+L ++++
Sbjct: 12 LKGLRVLEFAGIGPGPHCAMLLADMGAEVLRIEREGGNGWPNPVVDRGRKTLILDIRSEA 71
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + LA +DV++E FR GVME+L+LGPD L + NP+LIY R++G+GQ GP + AG
Sbjct: 72 GRARCLELAQTADVLIEGFRPGVMERLELGPDELLQRNPKLIYGRVTGWGQTGPLARAAG 131
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ + + PP NL DFGGG L A+GI+ AL+ER +SG+GQVID
Sbjct: 132 HDINYIALTGALAAIRGESGTAIPPLNLVGDFGGGSLYLAVGILAALWERERSGQGQVID 191
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+++G + L ++ + D R N L G A Y Y DGR +++G LE QF+
Sbjct: 192 AAIIDGVSSLMTFFAGLLPSGRIDMQRERNPLAGAAPNYRCYRCADGREISIGPLEPQFW 251
Query: 243 AQLLAGLGMTEEELPQHEVETG---RAKLTEK-FKEKTQAEWCEIFDNTDACVTPVLSLS 298
+LL L E E G +A+L E+ F +TQAEWC + + +DAC PVL L+
Sbjct: 252 RELLERLDAPEALWAGCEDPAGWPEQAELLERLFLTRTQAEWCALLEGSDACFAPVLELA 311
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
+A+ H H RG + G++ APAPR SRTPG ++ T
Sbjct: 312 EASEHAHLRQRGVY-QELDGMLQAAPAPRFSRTPGKARRT 350
>gi|383821994|ref|ZP_09977227.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
phlei RIVM601174]
gi|383332292|gb|EID10775.1| putative acyl-CoA transferase/carnitine dehydratase [Mycobacterium
phlei RIVM601174]
Length = 359
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 209/339 (61%), Gaps = 14/339 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYGKKSLCINLK 59
L + V+E G+ P P M+L + GA V+R+ + G D + GK+ + +++K
Sbjct: 7 LADVKVIELGGIGPGPHAAMVLADLGADVVRVRRPGGLQIPAENLDLMHRGKRVVDLDVK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K + + +LA ++DV+++ FR G E+L +GPD NPRLIYAR++G+GQ GP +
Sbjct: 67 KDP--AALLDLAAKADVLIDGFRPGTCERLGIGPDECAAVNPRLIYARITGWGQHGPLAQ 124
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINYL +G+L+ +G+R+R P P NL ADFGGG + LGIV AL+ER +SGRGQ
Sbjct: 125 TAGHDINYLSQTGVLAAIGYRDRPPVAPLNLVADFGGGSMFLLLGIVSALYERERSGRGQ 184
Query: 180 VIDCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
VID MV+G + L +W + T R +LDGGA FY TYET DG++MAVGA+
Sbjct: 185 VIDAAMVDGVSVLAQMAWTMKAVGTL--KDERESFMLDGGAPFYRTYETADGKYMAVGAI 242
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QF+A+LL GLG+ +E+ ++G R E+F KT+ EW IF TDACVTP
Sbjct: 243 EPQFFAKLLEGLGLDPDEVGPQLDKSGYPRMRELFAERFASKTRDEWTAIFAGTDACVTP 302
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
VL+ S+A H R + + GV APAPR SRTP
Sbjct: 303 VLTWSEAAESEHLRARSTLV-QANGVEQAAPAPRFSRTP 340
>gi|379762292|ref|YP_005348689.1| mcr protein [Mycobacterium intracellulare MOTT-64]
gi|378810234|gb|AFC54368.1| mcr protein [Mycobacterium intracellulare MOTT-64]
Length = 334
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 198/315 (62%), Gaps = 5/315 (1%)
Query: 22 MILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPF 81
M+L + GA VIR+ + G + G++ + NLK + ++ L +++DV++E F
Sbjct: 1 MVLADLGADVIRVQRPGQLAGRANPQLRGRRVVEANLKDPADHAAVRRLIDRADVLIEGF 60
Query: 82 RKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRN 141
R GV E+L LGPDV C +NP L+Y RL+G+GQ GP + AGHDINY+GL+G+L +G +
Sbjct: 61 RPGVTERLGLGPDVCCATNPALVYLRLTGWGQTGPRALEAGHDINYIGLTGLLHAIGPAS 120
Query: 142 RNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQD 201
+ P PP NL D+GGG + +G++ AL ER S RGQVID +V G+A L + +
Sbjct: 121 QPPVPPLNLVGDYGGGSMPAVIGVLAALVERQTSSRGQVIDAAIVNGAAQLTQVVWSMRA 180
Query: 202 TFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEV 261
W RG N+ DG A FY TYE DG ++AVGALE++F+A++LA L + E +
Sbjct: 181 DGRWSDDRGTNVFDGSAPFYRTYECADGAYVAVGALEAEFFAKMLAVLDIDPETVGPQRD 240
Query: 262 ETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRA 317
E+G A L++ F ++T+ EW +F N DACVTPVL+L++A + PH RG FI
Sbjct: 241 ESGWPAMHALLSDTFAQRTRDEWSALFANIDACVTPVLTLAEAVADPHLTERGVFI-EID 299
Query: 318 GVVAPAPAPRLSRTP 332
GV PAPAP+ SRTP
Sbjct: 300 GVTQPAPAPQFSRTP 314
>gi|163854566|ref|YP_001628864.1| hypothetical protein Bpet0262 [Bordetella petrii DSM 12804]
gi|163258294|emb|CAP40593.1| conserved hypothetical protein [Bordetella petrii]
Length = 357
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 204/352 (57%), Gaps = 33/352 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDT----------VGYGKK 52
L G+ VLE P P+ GM+L + GATVIRI++ P D GK+
Sbjct: 5 LAGLRVLELEAPGPVPWAGMMLADMGATVIRIER----PAPADMGIPRDARFELTARGKQ 60
Query: 53 SLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYG 112
++ +LK G ++ +LA ++DV+LE R GVME+L LGPD N L+Y R++G+G
Sbjct: 61 AVAADLKTEAGRQMVLDLAAEADVLLEGLRPGVMERLGLGPDACWARNAALVYGRITGWG 120
Query: 113 QDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
Q GP + GHDINYL SG+L +G P P NL DFG GG++ G++ AL E
Sbjct: 121 QTGPLAQTVGHDINYLAASGVLHSIGPETGPPVVPLNLIGDFGAGGMLLLTGVLAALLES 180
Query: 173 SKSGRGQVIDCNMVEG-----SAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETK 227
+SG+GQV+D MV+G + LG W R Q W R NLLDGGA FY TY T
Sbjct: 181 RQSGKGQVVDAAMVDGALSMLAPILGRW-QRGQ----WQDRRASNLLDGGAPFYTTYATS 235
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEI 283
D + +AVGA+E +FYA LL GLG+ LP QH+ + RA+L F + W +
Sbjct: 236 DDKAVAVGAIEPRFYAALLTGLGLDAGSLPDQHDQASWPDMRARLARIFARHPRDHWAGV 295
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSF--IPNRAGVVAPAPAPRLSRTPG 333
F +T+ACVTPVLSL++ HPH V R SF I N V+ PAPAPR SRTPG
Sbjct: 296 FQDTEACVTPVLSLAEVPRHPHFVARSSFQQINN---VLHPAPAPRFSRTPG 344
>gi|424865755|ref|ZP_18289611.1| alpha-methylacyl-CoA racemase [SAR86 cluster bacterium SAR86B]
gi|400758328|gb|EJP72535.1| alpha-methylacyl-CoA racemase [SAR86 cluster bacterium SAR86B]
Length = 367
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/316 (41%), Positives = 199/316 (62%), Gaps = 6/316 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINLKK 60
LK + ++EFAG+ P PFCGM+L + GA VIRI++ + + + D KKS+ +LK
Sbjct: 4 LKDVKIIEFAGIGPGPFCGMLLADLGAEVIRIERKDNEGKGDINDIHNRSKKSITADLKN 63
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ + + L +Q D I+E FR GVMEKL L PD N +L+Y R++G+GQDGP +
Sbjct: 64 KETIGEVLKLISQVDGIIEGFRPGVMEKLGLSPDTCLSKNSKLVYGRMTGWGQDGPMAYT 123
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ + G L +G +++NP+ P NL D+GGGG+ A+G++ LF K+G GQ+
Sbjct: 124 AGHDINYISMVGALHAIGKKDQNPSVPLNLVGDYGGGGMHLAVGMLAGLFHAIKTGEGQI 183
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D M++GSA L + + W R NLLDG AHFYDTYET D +++A+G++E Q
Sbjct: 184 VDSAMIDGSASLMGFFYYLHNVGFWKDERESNLLDGFAHFYDTYETLDKKYIAIGSIEPQ 243
Query: 241 FYAQLLAGLGMTEEELPQHEVET----GRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
FY L+ LG+ E+ ++ + ++ + KT++EW +IF TDACVTPVLS
Sbjct: 244 FYKILIDNLGLNFEDFKNQMDKSLWPELKKRIAKAVSSKTRSEWTKIFSGTDACVTPVLS 303
Query: 297 LSQATSHPHNVHRGSF 312
+ ++ + H++ R +F
Sbjct: 304 IDESFNDSHHLDRKTF 319
>gi|416944173|ref|ZP_11934786.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. TJI49]
gi|325524060|gb|EGD02236.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. TJI49]
Length = 388
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/376 (39%), Positives = 212/376 (56%), Gaps = 18/376 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L G+ ++E AG+ P P M L + GATVIR+D+ GA V+ +G +KS+ +
Sbjct: 11 LAGVRIVEIAGIGPGPLAAMFLADLGATVIRVDRKEPSGLGAPRPVEFDLGLRNRKSVRV 70
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ L Q+D ++E FR GVME+L LGP+ NPRL+Y R++G+GQDGP
Sbjct: 71 DLKDPAAVEMVLELIEQADGLIEGFRPGVMERLGLGPEPCLARNPRLVYGRVTGWGQDGP 130
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S +AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 131 LSQVAGHDLNYISVTGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARGSG 190
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D MV+G A + + + DK RG NLLD GA FY+ Y DG++++VG
Sbjct: 191 RGQVVDAAMVDGVASIMTVTMGLHAAGMLDKARGTNLLDTGAPFYEVYACADGKYVSVGP 250
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAK-------LTEKFKEKTQAEWCEIFDNTDA 289
+E +FY LL LG+ + P + + RA+ L KF+E+T+ EW ++ + D
Sbjct: 251 IEGKFYRLLLEQLGLQDH--PALQAQMDRAQWPEAKQVLAAKFRERTRDEWAQLLGHLDV 308
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
CV PVL +A HPH RG+F+ GV PAP PR SRTP E AP
Sbjct: 309 CVAPVLDFDEAPHHPHVKARGTFV-ELDGVTHPAPGPRFSRTPAVRP--EPPAAPTTDNA 365
Query: 350 EVLRHFGYSDANIEEL 365
DA IE L
Sbjct: 366 IAALRDWLPDARIEAL 381
>gi|407275319|ref|ZP_11103789.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus
sp. P14]
Length = 379
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/366 (42%), Positives = 214/366 (58%), Gaps = 16/366 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L G+ V+E AGL PAPF M L + GA V+R+++ GA P + DT+ GK+ +
Sbjct: 9 LAGLKVVELAGLGPAPFAAMFLADQGADVVRVERTGAGFTMPIDPRL-DTLQRGKRMIAA 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK GL+ + LA ++DV++E +R GV E+L LGP+ NP+L+Y R++G+GQDGP
Sbjct: 68 DLKDPDGLATVLALAEKADVLIEGYRPGVTERLGLGPEDCWARNPKLVYGRMTGWGQDGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD Y L G L +G P P +L DFGGG + GI+ AL+E SG
Sbjct: 128 LAQRAGHDPTYQALVGSLHAIGRAGGPPQLPLSLVGDFGGGAMYLVSGILAALWEVQSSG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D +V+G A+L + W+ RG NL+D GA F D YET DGR +AV A
Sbjct: 188 RGQVVDAAIVDGVAHLMANPYSMLAGGAWNDERGTNLIDSGAPFVDVYETSDGRHVAVAA 247
Query: 237 LESQFYAQLLAGLGMTEE-ELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE FYA+LLAGLG+ + LP + RA++ F + + EW IF +TDACV
Sbjct: 248 LEPPFYARLLAGLGLDADGALPGQWDRRRWPELRARIAGVFATRPRDEWAAIFRDTDACV 307
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGV-HTRE 350
P+LS+++A + H RG+F+ R G PAPAPR SRTP P PG E
Sbjct: 308 APILSMTEAPADAHLTARGTFL-YRDGHPEPAPAPRFSRTPAGRPTAP--PVPGQDDPDE 364
Query: 351 VLRHFG 356
+LR +G
Sbjct: 365 ILRTWG 370
>gi|388569521|ref|ZP_10155913.1| alpha-methylacyl-CoA racemase [Hydrogenophaga sp. PBC]
gi|388263270|gb|EIK88868.1| alpha-methylacyl-CoA racemase [Hydrogenophaga sp. PBC]
Length = 366
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 206/347 (59%), Gaps = 10/347 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTV-GYGKKSLCINLKKA 61
L G+ V EFAG+ P PF M+L++ GA V+ ID+ +P + V G G+ + +LK
Sbjct: 11 LAGLRVAEFAGIGPGPFACMLLSDMGADVVTIDRPTRKPTDRGNVTGRGRTVVTADLKDP 70
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ L ++DV++E FR GVME+L LGPD + NPRLIY R++G+GQ GP + A
Sbjct: 71 SARETVFALLEKADVLVEGFRPGVMERLGLGPDAVLARNPRLIYGRMTGWGQHGPLAQAA 130
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NY+ ++G +G N P PP NL D+GGG L +GI+ AL E SGRGQV+
Sbjct: 131 GHDLNYISITGAAHAIGPANGAPVPPLNLVGDYGGGSLYLLVGILAALHEAGSSGRGQVV 190
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D + +G+ L + + + RG N+LDGGA +Y YET DGR +++G +E QF
Sbjct: 191 DAAITDGTISLMANFVGHAVRGNFREQRGSNMLDGGAPYYGAYETADGRHVSIGPIEPQF 250
Query: 242 YAQLLAGL----GMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
+A+L + G+ + + + RA+L F+ +TQAEW + TD C P+L L
Sbjct: 251 FAELCERIGVNDGLRDAQNDRARWPELRAELEHIFRGETQAEWTRRLEGTDVCFAPILPL 310
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP 344
S+A HPHNV R +FI + GV PAPAPR SRTPG + PAP
Sbjct: 311 SEAARHPHNVARQAFI-DIDGVGHPAPAPRFSRTPGRIQ----GPAP 352
>gi|302546950|ref|ZP_07299292.1| putative alpha-methylacyl-CoA racemase [Streptomyces hygroscopicus
ATCC 53653]
gi|302464568|gb|EFL27661.1| putative alpha-methylacyl-CoA racemase [Streptomyces himastatinicus
ATCC 53653]
Length = 396
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/375 (41%), Positives = 223/375 (59%), Gaps = 9/375 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-GKKSLCINLKKA 61
L G+ V+E G+ P PFC M+L + GA VIR+++ D V + G++S I+LK
Sbjct: 22 LAGLRVVELGGIGPGPFCAMLLADAGADVIRVERPSDVGGSPDPVLHRGRRSAAIDLKHP 81
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G+ + +L +DV+LE FR GV E+L +GP NPRL+Y R++G+GQ+GP + A
Sbjct: 82 EGVGAVLDLVADADVLLEGFRPGVAERLGVGPGPCLARNPRLVYGRMTGFGQEGPLAPRA 141
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ LSG L +G + P P NL DFGGGG + A G++ + + +G+GQV+
Sbjct: 142 GHDINYIALSGALGTIGPADGPPILPLNLLGDFGGGGALLAFGVLCVVLQARATGKGQVV 201
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+GSA L + + W RG N LDG A FY Y +DG+++AVGA+E+ F
Sbjct: 202 DAAMVDGSAQLLAMIYSRLHQGRWTDGRGVNYLDGTAPFYGVYRCRDGQYVAVGAIEAPF 261
Query: 242 YAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
+A LL LG+ + H+ + R +L + F +T+ +W +F + DACVTPVLS
Sbjct: 262 FAALLERLGLVADADFAHQWDRSRWPVMRRRLAQVFATRTRDDWAAVFADADACVTPVLS 321
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL-SRTPGTSKITEHNPAPGVHTREVLRHF 355
L +A HPHN RG+F+ + GV+ PAPAPR S TP + P PG HT +VL
Sbjct: 322 LREAPRHPHNAARGTFLTDDTGVLQPAPAPRFGSSTP--RRHARPAPLPGEHTAQVLAET 379
Query: 356 GYSDANIEELIREDV 370
G + I++L +V
Sbjct: 380 GRNPEQIKQLFDAEV 394
>gi|73538379|ref|YP_298746.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
gi|72121716|gb|AAZ63902.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
Length = 388
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 204/350 (58%), Gaps = 11/350 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ------DTVGYGKKSLCI 56
L G+ ++E AG+ P P GM+L + GA V+RI++ G D + G+KS+ +
Sbjct: 9 LAGVRIIELAGIGPGPLAGMMLADMGAEVLRIERPGETDLGVRRERRFDLMLRGRKSIAL 68
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ + +L +D ++E FR GV E+L LGPD NP+L+Y R++G+GQ GP
Sbjct: 69 DLKDPQAVAAVLDLVESADALIEGFRPGVTERLGLGPDACLARNPKLVYGRITGWGQTGP 128
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+G L+ +G R + P P DF GGG+ G++ AL E KSG
Sbjct: 129 LAHTAGHDVNYIALTGALNAIGQRGQRPAIPPAYLGDFAGGGMFLLAGVLAALVEAGKSG 188
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+G+A LGS W+ RG N+LD GAH+Y+ Y+ KDG +++VG
Sbjct: 189 KGQVVDAAIVDGAAALGSVFFGLVAAGQWNPERGTNVLDSGAHYYNVYQCKDGGWISVGP 248
Query: 237 LESQFYAQLLAGLGMTE----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E++FY LL +G+ E+L E +L E F+ +T+ WC + + TDAC
Sbjct: 249 IEARFYRDLLDRIGIDPASLGEQLDPANWEAAGNRLAELFRTRTRDAWCALLEGTDACFA 308
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
PVLS +A H H R +F+ G+V PAPAPR SRTP P
Sbjct: 309 PVLSYEEAPQHAHLKARETFV-EIDGIVQPAPAPRFSRTPSALPTAPRAP 357
>gi|375100554|ref|ZP_09746817.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora cyanea NA-134]
gi|374661286|gb|EHR61164.1| putative acyl-CoA transferase/carnitine dehydratase
[Saccharomonospora cyanea NA-134]
Length = 387
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 203/337 (60%), Gaps = 10/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA---QPF--VQDTVGYGKKSLCIN 57
L G+ V+E AGL PAPF M L + GA V+R+ + A P +DT+ GK++L ++
Sbjct: 9 LTGLRVVELAGLGPAPFAAMFLADLGADVVRVQRPNAGFTMPIDPRRDTLQRGKRTLDVD 68
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G V+ LA +DV++E +R GV E+L LGP NP L+Y R++G+GQDGP+
Sbjct: 69 LKHPDGAEVVLALAEHADVLVEGYRPGVAERLGLGPADCWARNPALVYGRMTGWGQDGPW 128
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD Y ++G L +G P P +L DFGGG L GI+ AL+E +SGR
Sbjct: 129 AQRAGHDPTYQAITGSLHAIGRAGGPPQLPLSLVGDFGGGALYLVSGILAALWEAQRSGR 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G A+L + W+ RG NL+D GA F D YET DG+ +AV AL
Sbjct: 189 GQVVDAAIVDGVAHLMANPYSLLAGGAWNDERGTNLIDSGAPFVDVYETADGKHVAVAAL 248
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTP 293
E FYAQLL GLG+T +LP G +L ++F +T+ EW F+ TDACV P
Sbjct: 249 EPPFYAQLLDGLGLTGADLPGQWDRAGWPRLRKRFAAVFATRTRDEWAARFEGTDACVAP 308
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR 330
VLS+++A H V RG+F+ +R G PAPAPR SR
Sbjct: 309 VLSMTEAPHAEHLVARGTFL-DRDGHPEPAPAPRFSR 344
>gi|384152497|ref|YP_005535313.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|399540899|ref|YP_006553561.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|340530651|gb|AEK45856.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
gi|398321669|gb|AFO80616.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei S699]
Length = 371
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 217/368 (58%), Gaps = 11/368 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-----QDTVGYGKKSLCIN 57
L G V+E G+ P PF GM+L + GA V+R+D+ A D + GK+S+ ++
Sbjct: 6 LAGCRVVELGGIGPGPFAGMLLADLGAEVVRVDRPAATGEAGRGGPADVLNRGKRSVVLD 65
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK+ G++ + LA ++DV+LE FR GV E+L +GP NPRL+Y R++G+GQDGP
Sbjct: 66 LKQPDGVAALLGLAGRADVLLEGFRPGVAERLGIGPGECLARNPRLVYGRMTGWGQDGPL 125
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
++ AGHD+ Y+ L+G L +G P P NL DFGGGG +G++ AL SGR
Sbjct: 126 AATAGHDLTYIALTGALGAVGAAGGPPQIPLNLVGDFGGGGCYLVIGVLAALRAAELSGR 185
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + W RG N LDGG FY YETKDGR +AVGAL
Sbjct: 186 GQVVDAAIVDGTAHLLASTFAKLARGAWTDERGVNQLDGGWPFYAVYETKDGRHVAVGAL 245
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E +FY +L+ L + + QH+ R L ++F E+T+ EW +F+ TD CV PV
Sbjct: 246 EPKFYRRLVELLELDVDPDRQHDRSRWPELRRLLEKRFAERTRDEWVTLFEGTDGCVAPV 305
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL++A HPH RGS + R GV+ PA APR S+TP S PA G TR VL
Sbjct: 306 LSLAEAAGHPHLAARGSVV-VRDGVLQPAAAPRFSQTP--SAPGAAAPAVGADTRAVLTD 362
Query: 355 FGYSDANI 362
+G + I
Sbjct: 363 WGIDERII 370
>gi|343429285|emb|CBQ72859.1| probable alpha-methylacyl-coa racemase [Sporisorium reilianum SRZ2]
Length = 429
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 238/419 (56%), Gaps = 59/419 (14%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH--GAQPFVQDTVGYGKKSLCINL 58
+ L GI V+EF+GLAP PF GM+L +FGA VIRIDK G P D++ GK+S ++
Sbjct: 10 LPLAGIKVVEFSGLAPGPFVGMVLADFGADVIRIDKTNTGLNP---DSLCRGKRSFAVSP 66
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPY 117
K A+G +++K L +D++++PFR V+E+L LGP D + + LI+ARL+G+ + GPY
Sbjct: 67 KSAEGHALIKKLVQSADIVIDPFRPSVLERLGLGPQDFEKEIHKGLIFARLTGFQRTGPY 126
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
++MAGHDINY+ LS +LS+LG P PP NL DF GG ++C LGI++AL ERS+S +
Sbjct: 127 ANMAGHDINYIALSDVLSMLGQAGGKPQPPSNLLGDFAGGSMICLLGILLALVERSRSSQ 186
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFL----W--------DKPRGENLLDGGAHFYDTYE 225
GQV++ +MV G+ Y+ S++ + ++L W D+ RG N LDGGA +Y Y
Sbjct: 187 GQVVEADMVTGARYVSSFVLLS--SYLSHPSWGAIHSDGSDETRGRNTLDGGAPWYGVYA 244
Query: 226 TKDGRFMAVGALESQFYAQLLAGLGMTEEELP----------QHEVETG---RAKLTEKF 272
KDG +M+VGA+E FY +LL L E P QH+ +T + + F
Sbjct: 245 CKDGGYMSVGAIEPHFYQELLDILRKVLPEAPRGTQHPSASTQHDRDTWPELQRYFSACF 304
Query: 273 KEKTQAEWCEIFDNTDACVTPVLSLSQA-------TSHPHNVHRGSFIPNRAGVVAPAPA 325
+ ++EW F TDAC PVL+ +A + NV G V P PA
Sbjct: 305 AQLARSEWERHFIRTDACTVPVLTRDEAALSGVLPAASAENVADGD-------PVIPFPA 357
Query: 326 PRLSRTPGT-----------SKITEHNPAPGVHTREVLRHFGYSDANIE-ELIREDVIE 372
PRL+RTPG ++ E PG HT ++L G DAN EL R D ++
Sbjct: 358 PRLTRTPGKPPAGSAGGEWENESAEMLLTPGEHTDDILVELGIEDANKRIELYRCDAVD 416
>gi|375104133|ref|ZP_09750394.1| putative acyl-CoA transferase/carnitine dehydratase
[Burkholderiales bacterium JOSHI_001]
gi|374664864|gb|EHR69649.1| putative acyl-CoA transferase/carnitine dehydratase
[Burkholderiales bacterium JOSHI_001]
Length = 383
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 154/384 (40%), Positives = 219/384 (57%), Gaps = 15/384 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ------PFVQDTVGYGKKSLCI 56
L G+ V+E A + P P C M+L + GA V RID+ P D +G G++S+ +
Sbjct: 4 LAGMKVIELASIGPGPMCAMLLADLGAQVTRIDRLAPSGLGVPVPSQFDVMGRGRRSVAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK G L +DV++E +R GV E+L LGPD NPRL+Y R++G+GQ GP
Sbjct: 64 DLKAPAGRDAALRLIAGADVLVEGWRPGVAERLGLGPDDCIARNPRLVYGRMTGFGQTGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+ L+G L +G PP NL DFGGG L A G++ AL+ER +SG
Sbjct: 124 LAPAAGHDINYIALTGALHAIGTPG-TALPPLNLVGDFGGGALYLAFGLMAALWERQRSG 182
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKP-RGENLLDGGAHFYDTYETKDGRFMAVG 235
GQV+D MV+G++ L + W+ RG NLLDGGA FY TY+ G +AVG
Sbjct: 183 HGQVVDAAMVDGASSLMAMFHGLAAAGQWNAASRGTNLLDGGAPFYATYDCAGGGQVAVG 242
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
ALE +F+A+L+ +G+ +P+ + R L F+ +T+ EW + + +DAC
Sbjct: 243 ALEPKFFAELVQRVGLDPAFVPRQYDRSAWPAMREALAALFRTRTRDEWATLLEGSDACA 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLSL +A H H R +F+ GV PAPAPR SRTP + + E P G H+R+V
Sbjct: 303 APVLSLHEAPQHRHAAARAAFV-QVDGVSQPAPAPRFSRTP--AAVPEPPPREGQHSRQV 359
Query: 352 LRHFGYSDANIEELIREDVIEETI 375
L G+S +I L+ V+ + +
Sbjct: 360 LADAGFSADDINTLLASGVLRQDV 383
>gi|297203800|ref|ZP_06921197.1| racemase [Streptomyces sviceus ATCC 29083]
gi|197711851|gb|EDY55885.1| racemase [Streptomyces sviceus ATCC 29083]
Length = 391
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 144/376 (38%), Positives = 216/376 (57%), Gaps = 14/376 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF GM+L + GA V+R+ + G D K+S+ ++L
Sbjct: 12 LAGVRVVELAGIGPGPFAGMLLADLGADVVRVSRPGGAALSIDPDHDITNRNKRSVVVDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + +LA ++D+++E R GV E+L +GP+ NP L+Y R++G+GQ GP +
Sbjct: 72 KAPEGPARVLDLAARADILIEGNRPGVAERLGVGPEDCHARNPALVYGRMTGWGQQGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L ++G R P P NL D+ GG L +G++ AL +G G
Sbjct: 132 QRAGHDIAYIALTGTLGMIGEPGRPPAVPANLLGDYAGGSLYLVVGVLAALHHARATGTG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+++L + + W RG NLLDGG +Y TYET DG++MAVGALE
Sbjct: 192 QVVDAAIVDGTSHLSAMIHAMTAAGGWQDRRGANLLDGGCPYYGTYETADGKYMAVGALE 251
Query: 239 SQFYAQLLAGLGM---TEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFY L LG+ T+ R + +F+ +T+ EW +F+ TDACV PVL
Sbjct: 252 PQFYDLFLDLLGVPDFTDARKDWTRWGDLREAVAARFRSRTRDEWAAVFEGTDACVAPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRH 354
SL +A HPH RG+F + G+ PAPAPR S TP + PA G T +V R
Sbjct: 312 SLREAPHHPHLAARGTFT-DHGGITQPAPAPRFSATPTAVRT---GPARDGADTADVARD 367
Query: 355 FGYSDA--NIEELIRE 368
+ D ++ +++++
Sbjct: 368 WDVPDLAWDVPDVVKD 383
>gi|300789019|ref|YP_003769310.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei U32]
gi|299798533|gb|ADJ48908.1| acyl-CoA transferase/carnitine dehydratase [Amycolatopsis
mediterranei U32]
Length = 371
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 217/368 (58%), Gaps = 11/368 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-----QDTVGYGKKSLCIN 57
L G V+E G+ P PF GM+L + GA V+R+D+ A D + GK+S+ ++
Sbjct: 6 LAGCRVVELGGIGPGPFAGMLLADLGAEVVRVDRPAATGEAGRGGPADVLNRGKRSVVLD 65
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK+ G++ + LA ++DV+LE FR GV E+L +GP NPRL+Y R++G+GQDGP
Sbjct: 66 LKQPDGVAALLGLAGRADVLLEGFRPGVAERLGIGPGECLARNPRLVYGRMTGWGQDGPL 125
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
++ AGHD+ Y+ L+G L +G P P NL DFGGGG +G++ AL SGR
Sbjct: 126 AATAGHDLTYIALTGALGAVGAAGGPPQIPLNLVGDFGGGGCYLVIGVLAALRAAELSGR 185
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + W RG N LDGG FY YETKDGR +AVGAL
Sbjct: 186 GQVVDAAIVDGTAHLLASTFAKLARGAWTDERGVNQLDGGWPFYAVYETKDGRHVAVGAL 245
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E +FY +L+ L + + QH+ R L ++F E+T+ EW +F+ TD CV PV
Sbjct: 246 EPKFYRRLVELLELDVDPDRQHDRSRWPELRRLLEKRFAERTRDEWATLFEGTDGCVAPV 305
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
LSL++A HPH RGS + R GV+ PA APR S+TP S PA G TR VL
Sbjct: 306 LSLAEAAGHPHLAARGSVV-VRDGVLQPAAAPRFSQTP--SAPGAAAPAVGADTRAVLTD 362
Query: 355 FGYSDANI 362
+G + I
Sbjct: 363 WGIDERII 370
>gi|338972960|ref|ZP_08628331.1| alpha-methylacyl-CoA racemase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234121|gb|EGP09240.1| alpha-methylacyl-CoA racemase [Bradyrhizobiaceae bacterium SG-6C]
Length = 374
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 213/359 (59%), Gaps = 10/359 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
L+G+ ++EFAG+ P PF M+L++ GA V+ I + + V+D V G++ + ++LK
Sbjct: 11 LRGVRIVEFAGIGPGPFASMLLSDMGADVVSIARPRQGKRDVRDFVNRGRRVIELDLKNP 70
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
++ +L +DV++E FR VME+L LGPDV+ K NP+L+Y R++G+GQ+GP + A
Sbjct: 71 ADIAKALDLIGAADVLIEGFRPQVMERLGLGPDVVLKRNPKLVYGRMTGWGQEGPLAQAA 130
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ ++G L N P NL D+GGG L +G++ A+ E SG+GQV+
Sbjct: 131 GHDINYIAITGALDSFRAANGETVSPLNLVGDYGGGALYLVVGVLAAVIEARTSGKGQVV 190
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLW-DKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
D M +G + + + + T W D+PR NLLDGGA FY TY+ KDG FMA+GALE Q
Sbjct: 191 DAAMCDGVSSMLTMFHSMKATGRWTDQPR-TNLLDGGAPFYRTYQCKDGGFMAIGALEPQ 249
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLS 296
FYA+L G++E+ ++G L EK FK KT+ EW + + +DAC V
Sbjct: 250 FYAELRQLAGLSEDCYDAQMDKSGWPNLHEKMTALFKTKTRDEWAALLEGSDACAAAVRG 309
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
L A +HPH R +F+ G V PAPAPR SRTP S I P V ++L +
Sbjct: 310 LFDAPNHPHLAARKTFV-TVDGHVQPAPAPRFSRTP--SNIQGSPAVPPVDAADILSQW 365
>gi|296393100|ref|YP_003657984.1| L-carnitine dehydratase/bile acid-inducible protein F [Segniliparus
rotundus DSM 44985]
gi|296180247|gb|ADG97153.1| L-carnitine dehydratase/bile acid-inducible protein F [Segniliparus
rotundus DSM 44985]
Length = 355
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 209/336 (62%), Gaps = 7/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VLEFAG+ P P ++L GA V+R+ + G + D G++ + +L++
Sbjct: 6 LTGVRVLEFAGIGPGPHAALLLANLGADVVRVQRPGY--LLPDQQLRGRQIVLADLREDD 63
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
L+ +K L ++DV++E FR GVME+ LGP+ NP+L+Y R++G+GQDGP ++ AG
Sbjct: 64 QLAKVKGLVERADVLIEGFRPGVMERNGLGPEECAALNPKLVYGRITGWGQDGPLAARAG 123
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HD+NYL L+G+L +G P PP N+ ADFGGG + LGI+ AL ER +SGRGQ ID
Sbjct: 124 HDLNYLSLTGVLHAIGPAEAPPPPPLNMVADFGGGSMFLVLGILAALVERERSGRGQTID 183
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G L + + W+ R N LDG A +Y TY T DG++ AVGA+E QFY
Sbjct: 184 AAMVDGVNALSHLIWALRSVGFWNDGRQNNFLDGAAPYYRTYTTSDGKYFAVGAIEPQFY 243
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A+LLA LG+ +++P+ + G +L E F+ KT+ EW +F+ +DAC TPVL+
Sbjct: 244 AELLAKLGLAGKDIPEQGDQDGWPQLHTTFEEVFRTKTRDEWAAVFEGSDACATPVLTFE 303
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGT 334
+A+ HPH RG+ + GV+ P APR SRTPG
Sbjct: 304 EASRHPHMAARGNLVELAEGVL-PQAAPRFSRTPGA 338
>gi|400535477|ref|ZP_10799013.1| alpha-methylacyl-CoA racemase [Mycobacterium colombiense CECT 3035]
gi|400330520|gb|EJO88017.1| alpha-methylacyl-CoA racemase [Mycobacterium colombiense CECT 3035]
Length = 357
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 212/363 (58%), Gaps = 19/363 (5%)
Query: 22 MILNEFGATVIRIDK----HGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVI 77
M+L + GA VIR+D G P V TV ++SL ++K +G ++ LA +D
Sbjct: 1 MLLGDLGADVIRVDALAGVDGPLP-VDHTVRRSQRSLAADVKDPRGRDLVHRLAAGADAF 59
Query: 78 LEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLL 137
++ +R GV E+L +GPD L + NPRL+YAR++GYGQDGP + AGHDINYL L+G L +
Sbjct: 60 VDVYRPGVAERLGIGPDALLQHNPRLVYARMTGYGQDGPLAGHAGHDINYLALTGALHAI 119
Query: 138 GWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLT 197
G +P PP NL D+GGGG++ A+G++ A+ E +SG GQ++D MV+G A L +
Sbjct: 120 G-TAESPVPPLNLVGDYGGGGMLLAVGLLSAILEARESGAGQILDVAMVDGVAALLAPYF 178
Query: 198 RTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELP 257
W R +NLLDG AHFY Y T DG +AVGA+E +FYA+L A L + ++P
Sbjct: 179 GMLAAGTWRDRRQDNLLDGAAHFYGAYATADGGHIAVGAMEPKFYAELCARL---DVDVP 235
Query: 258 QHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSF 312
+ + R L +F E+T+ EW + D C TPVLSL++A HPHN R +F
Sbjct: 236 HDDGDPAAWAAHRDALAARFAERTRDEWERLLDAPGCCATPVLSLAEAPQHPHNAARQTF 295
Query: 313 IPNRAGVVAPAPAPRLSRTPGTSKITEHNPA-PGVHTREVLRHFGYSDANIEELIREDVI 371
I G+ PAPAPR SR T T +P+ PG HTR +L G I EL V+
Sbjct: 296 I-KLDGITQPAPAPRFSR---TRPATPASPSLPGDHTRALLSELGLDTRAITELEDAGVV 351
Query: 372 EET 374
++
Sbjct: 352 AQS 354
>gi|452960072|gb|EME65402.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus
ruber BKS 20-38]
Length = 379
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/372 (41%), Positives = 215/372 (57%), Gaps = 16/372 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L G+ V+E AGL PAPF M L + GA V+R+++ GA P + DT+ GK+ +
Sbjct: 9 LAGLKVVELAGLGPAPFAAMFLADQGADVVRVERTGAGFTMPIDPRL-DTLQRGKRMIAA 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK GL+ + L ++DV++E +R GV E+L LGP+ NP L+Y R++G+GQDGP
Sbjct: 68 DLKDPDGLATVLALVEKADVLIEGYRPGVTERLGLGPEDCWARNPELVYGRMTGWGQDGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD Y L G L +G P P +L DFGGG + GI+ AL+E +SG
Sbjct: 128 LAQRAGHDPTYQALVGSLHAIGRAGGPPQLPLSLVGDFGGGAMYLVSGILAALWEAQRSG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D +V+G A+L + W+ RG N++D GA F D YET DG +AV A
Sbjct: 188 RGQVVDAAIVDGVAHLMANPYSMLAGGAWNDERGTNIIDSGAPFVDVYETSDGGHVAVAA 247
Query: 237 LESQFYAQLLAGLGM-TEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE FYAQLLAGLG+ ++ LP + RA++ F + + EW IF +TDACV
Sbjct: 248 LEPPFYAQLLAGLGLDADDALPGQWDRRRWPELRARIAGVFATRPRDEWAAIFRDTDACV 307
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGV-HTRE 350
P+LS+S+A + H RG+F+ R G PAPAPR SRTP P PG E
Sbjct: 308 APILSMSEAPADAHLTARGTFL-YRDGHPEPAPAPRFSRTPAGRPTAP--PVPGQDDPDE 364
Query: 351 VLRHFGYSDANI 362
+LR +G A +
Sbjct: 365 ILRTWGVLGAAV 376
>gi|389876552|ref|YP_006370117.1| alpha-methylacyl-CoA racemase [Tistrella mobilis KA081020-065]
gi|388527336|gb|AFK52533.1| alpha-methylacyl-CoA racemase [Tistrella mobilis KA081020-065]
Length = 382
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 218/369 (59%), Gaps = 9/369 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQP-FVQDTVGYGKKSLCINLKK 60
L G+ V+EFAG+ P PF GM+L + GA V+R+++ G +P D + G++S+ ++LK
Sbjct: 11 LAGLRVVEFAGIGPGPFAGMMLADMGAEVLRVERAGDMRPGAATDVLARGRRSVALDLKT 70
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
G + L +++D ++E +R GVME+L LGPD+ NPRL+Y R++G+GQ GP ++
Sbjct: 71 DAGRAAALALIDRADAMMEGYRPGVMERLGLGPDICRARNPRLVYGRMTGWGQTGPAAAA 130
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD+NY+ LSG L +G +R P P N+ DFGGGG++ A G+V AL + +++GRG V
Sbjct: 131 AGHDLNYIALSGALWAMGDADRPPPVPLNIVGDFGGGGMLLAFGMVTALLKAARTGRGDV 190
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D + +G+A L + + LW R +N LDGGA +Y Y D ++ +GALE +
Sbjct: 191 VDAAICDGTAVLMAMTFSMRAAGLWSDRRADNKLDGGAPWYGVYRCADDGWITIGALEPK 250
Query: 241 FYAQLLAGLGMTEEEL----PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
F+A LL LG+ + + + R+ L E F + +A W + +NTD C PVLS
Sbjct: 251 FWALLLDRLGLDPAAIGDRNRREDWPRMRSILAETFAGRPRAHWQALLENTDVCFAPVLS 310
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+A HPHN RG F+ R GVV PAPAPR + + + P PG T L +G
Sbjct: 311 PMEAPDHPHNRVRGIFV-TRDGVVQPAPAPRFAEA--RTPLPAPPPVPGADTATALADWG 367
Query: 357 YSDANIEEL 365
A + +L
Sbjct: 368 LDPALLAQL 376
>gi|392421303|ref|YP_006457907.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri CCUG 29243]
gi|390983491|gb|AFM33484.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri CCUG 29243]
Length = 360
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 209/341 (61%), Gaps = 7/341 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+G+ VLEFAG+ P P C M+L + GA V+RI++ G + V G+K+L ++++
Sbjct: 12 LQGLRVLEFAGIGPGPHCAMLLADMGAEVLRIEREGGNGWPNPVVDRGRKTLTLDIRSEA 71
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + LA +DV++E FR GVME+L LGP+ L + NPRLIY R++G+GQ GP + AG
Sbjct: 72 GRARCLELAQAADVLIEGFRPGVMERLGLGPEELRQRNPRLIYGRMTGWGQTGPLARAAG 131
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ + + PP NL DFGGG L A+GI+ AL+ER +SG+GQVID
Sbjct: 132 HDINYIALTGALAAIRGESGTAIPPLNLVGDFGGGSLYLAVGILAALWERERSGQGQVID 191
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G + L ++ + D R N L G A Y Y DGR +A+G LESQF+
Sbjct: 192 AAIVDGVSSLMTFFAGLLPSGRIDMQRERNSLAGAAPNYRCYRCADGREIAIGPLESQFW 251
Query: 243 AQLLAGLGMTEEELPQHEVETG----RAKLTEK-FKEKTQAEWCEIFDNTDACVTPVLSL 297
+LL + E L + G +++L E+ F +T+AEWC + + +DAC PVL L
Sbjct: 252 HELLERID-APEALWAGCADPGEWPVQSELLERLFATRTRAEWCALLEGSDACFAPVLEL 310
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
+A HPH RG + + GV+ APAPR SRTPG ++ T
Sbjct: 311 EEAAQHPHLRQRGVY-QDVEGVLQAAPAPRFSRTPGKARRT 350
>gi|429198955|ref|ZP_19190738.1| CoA-transferase family III protein [Streptomyces ipomoeae 91-03]
gi|428665324|gb|EKX64564.1| CoA-transferase family III protein [Streptomyces ipomoeae 91-03]
Length = 406
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 213/378 (56%), Gaps = 11/378 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G + D K+S+ ++L
Sbjct: 10 LAGVRVVELAGIGPGPFAAMLLGDLGADVVRVDRPGGAGLAVNPLYDVTNRNKRSVIVDL 69
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K KG + +L ++DV++E +R GV E+L +GP+ NP L+Y R++G+GQ GP +
Sbjct: 70 KSPKGPDTVLDLVERADVLIEGYRPGVAERLGVGPETCHARNPGLVYGRMTGWGQQGPLA 129
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L ++G P P NL D+ GG L +G++ AL +G G
Sbjct: 130 PRAGHDIAYIALTGTLGMIGTPGTPPMAPANLLGDYAGGSLYLVVGVLAALHHARATGAG 189
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W R NLLDGG FY TYET DG+++AVGALE
Sbjct: 190 QVVDAAIVDGTAHLSAMIHGMLAAGGWQDRRAANLLDGGCPFYGTYETADGQYVAVGALE 249
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFY + + LG+ + + R + +FK +T+ EW +F+ +DACV PVL
Sbjct: 250 QQFYDEFVDLLGIKGRAPARKDTAAWGELRETVAARFKTRTRDEWTAVFEGSDACVAPVL 309
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
SL +A HPH RG+F + G+ PAPAPR S T + + PG T +V +
Sbjct: 310 SLREAPHHPHLAARGTFT-DFGGITQPAPAPRFSAT--HTSVRGGPAQPGADTTDVAHDW 366
Query: 356 GYSDANIEELIREDVIEE 373
G +E+ +DV E
Sbjct: 367 GIP-GLLEDASSQDVSPE 383
>gi|398830629|ref|ZP_10588812.1| putative acyl-CoA transferase/carnitine dehydratase
[Phyllobacterium sp. YR531]
gi|398213762|gb|EJN00351.1| putative acyl-CoA transferase/carnitine dehydratase
[Phyllobacterium sp. YR531]
Length = 358
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 202/339 (59%), Gaps = 8/339 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI VLEF GL PAP C M+L + GA V+RI++ G + G++ L ++++ +
Sbjct: 11 LTGIRVLEFIGLGPAPHCAMLLADLGADVVRIERSGGNGWPNPVQDRGRRILELDIRSDE 70
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G LA ++DV++E +R G ME+L LGPD L NP LIY R++G+GQ GP + AG
Sbjct: 71 GRKRCLELAAKADVLIEGYRPGTMERLGLGPDALQSLNPGLIYGRITGWGQTGPLAQSAG 130
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ +G + P PP NL D+GGG ++ A G++ AL ER SG+GQ+ID
Sbjct: 131 HDINYIALAGALASMG-TSGAPPPPLNLVGDYGGGSMLLAFGVLAALIERQNSGKGQIID 189
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G + L S T + R NL+ G A +Y +Y DGR++A+GALE +F+
Sbjct: 190 AAIVDGVSSLMSLFTGLAASGSVSMDRDRNLIGGAAPYYRSYACSDGRYIAIGALEPKFF 249
Query: 243 AQLLAGLGMTE-----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A+LL L M + +P E A+ T F +TQ EWC I + TDAC PVL+L
Sbjct: 250 AELLDKLNMDSGWMALQNIPAKWPEL-EAEFTRVFAARTQPEWCNILEGTDACFAPVLAL 308
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK 336
S + HPH R +++ G AP P+ SRTPG ++
Sbjct: 309 SDVSQHPHIRARETYV-QMDGQAQSAPVPKFSRTPGAAR 346
>gi|78060405|ref|YP_366980.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
gi|77964955|gb|ABB06336.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
Length = 388
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 204/340 (60%), Gaps = 12/340 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L GI ++E AG+ P P M L + GATVIR+D+ GA VQ +G +KS+ +
Sbjct: 11 LAGIKIVEIAGIGPGPLAAMFLADLGATVIRVDRKEPSGIGAPRPVQFDLGLRNRKSIRV 70
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ +L +D ++E FR GVME+L LGP+ NPRL+Y R++G+GQDGP
Sbjct: 71 DLKDPAAVDMVLDLIANADALIEGFRPGVMERLGLGPEPCLARNPRLVYGRVTGWGQDGP 130
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S +AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 131 LSQVAGHDLNYISITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARGSG 190
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A + + + DK RG NLLD GA FY+ Y DG++++VG
Sbjct: 191 QGQVVDAAMVDGVASIMTVTMGLHAAGMLDKARGTNLLDTGAPFYEVYVCADGKYVSVGP 250
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E +FY LL L + + L Q +++ + EKF+E+T+ EW + + DACV
Sbjct: 251 IEGKFYRLLLEHLDLQDHPLLQAQMDRAQWPQAKQVFAEKFRERTRDEWTQRLGHLDACV 310
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL +A SHPH RG+F+ + GV PAP PR SRT
Sbjct: 311 APVLDFDEAPSHPHLHARGTFV-DLDGVTHPAPGPRFSRT 349
>gi|83943358|ref|ZP_00955817.1| L-carnitine dehydratase/bile acid-inducible protein F
[Sulfitobacter sp. EE-36]
gi|83845590|gb|EAP83468.1| L-carnitine dehydratase/bile acid-inducible protein F
[Sulfitobacter sp. EE-36]
Length = 362
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 208/338 (61%), Gaps = 12/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
LKG+ V+E AG+ P P G +L + GA VI ID+ A D GK+S+ ++LK +
Sbjct: 5 LKGLEVIEMAGIGPGPLAGQLLADLGADVIVIDRAEAPADKTDVNRRGKRSVFLDLKSEE 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G S + L N++ +++E FR GVME+L LGPD L ++ +I+ R++G+GQDGP S AG
Sbjct: 65 GRSTAQALINRAGIVIEGFRPGVMERLGLGPDDLDET---VIFGRITGWGQDGPLSQSAG 121
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYLGL+G L+ +G + P PP NL AD+GGG + LGI+ A+FER SG+GQV+D
Sbjct: 122 HDINYLGLTGALAAMGTLDNPPPPPLNLVADYGGGTMFLLLGILAAVFERQTSGKGQVVD 181
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + + + W + R NLLDGGA FY Y TKD FM+VG LE QF+
Sbjct: 182 AAMVDGVSAMMGLFHTFKARGAWSENRASNLLDGGAPFYRCYRTKDDLFMSVGPLEPQFF 241
Query: 243 AQLLAGLGMTEEEL-----PQHEVETGRAKL-TEKFKEKTQAEWCEIFDNTDACVTPVLS 296
A LL G+ E P + E RA+L + F KTQAEW IF TDACV PVLS
Sbjct: 242 ALLLEKAGLPAEHSADQNDPSNWAE--RAELYAQAFASKTQAEWSGIFSGTDACVAPVLS 299
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGT 334
+ +A SHPH R + + GV+ APAPR SR+ T
Sbjct: 300 MDEAASHPHMAARQTLV-EVDGVLQAAPAPRFSRSKPT 336
>gi|414169900|ref|ZP_11425633.1| hypothetical protein HMPREF9696_03488 [Afipia clevelandensis ATCC
49720]
gi|410885632|gb|EKS33447.1| hypothetical protein HMPREF9696_03488 [Afipia clevelandensis ATCC
49720]
Length = 374
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 212/359 (59%), Gaps = 10/359 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
L+G+ V+EFAG+ P PF M+L++ GA V+ I + + V+D V G++ + ++LK
Sbjct: 11 LRGVRVVEFAGIGPGPFASMLLSDMGADVVSIARPRQGKRDVRDFVNRGRRVIELDLKNP 70
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
++ +L +DV++E FR VME+L LGPDV+ K NP+L+Y R++G+GQ+GP + A
Sbjct: 71 ADIAKALDLIGAADVLIEGFRPQVMERLGLGPDVVLKRNPKLVYGRMTGWGQEGPLAQAA 130
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ ++G L N P NL D+GGG L +G++ A+ E SG+GQV+
Sbjct: 131 GHDINYIAITGALDSFRAANGETVSPLNLVGDYGGGALYLVVGVLAAVIEARTSGKGQVV 190
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLW-DKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
D M +G + + + + T W D+PR NLLDGGA FY TY+ KDG FMA+GALE Q
Sbjct: 191 DAAMCDGVSSMLTMFHSMKATGRWTDQPR-TNLLDGGAPFYRTYQCKDGGFMAIGALEPQ 249
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPVLS 296
FYA+L G++E+ + G L EK FK +T+ EW + + +DAC V
Sbjct: 250 FYAELRQLAGLSEDCYDAQMDKAGWPNLHEKMTALFKTRTRDEWAALLEGSDACAAAVRG 309
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
L A +HPH R +F+ G V PAPAPR SRTP S I P V ++L +
Sbjct: 310 LFDAPNHPHLAARKTFV-TVDGHVQPAPAPRFSRTP--SNIQGSPAVPPVDAADILSQW 365
>gi|390451048|ref|ZP_10236631.1| L-carnitine dehydratase/bile acid-inducible protein F, partial
[Nitratireductor aquibiodomus RA22]
gi|389661659|gb|EIM73263.1| L-carnitine dehydratase/bile acid-inducible protein F, partial
[Nitratireductor aquibiodomus RA22]
Length = 339
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 202/330 (61%), Gaps = 14/330 (4%)
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
+G+K L ++LK G ++ + +Q+DV++E FR GVME+L GPD +NP L+YAR+
Sbjct: 13 HGRKILKLDLKHPAGRELLMRMIHQTDVLMEGFRPGVMERLGAGPDATLGANPGLVYARM 72
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+G+GQ+GP + AGHD+ YL SG+LS++G R+ P PP NL D+GGG + GI+ A
Sbjct: 73 TGFGQNGPLAQRAGHDLTYLAYSGVLSMIGRRDERPVPPLNLVGDYGGGTMFLIAGILAA 132
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
L E+++SG+GQV+D M++G++ L + + T W + RG NLLDGGA FYDTYET D
Sbjct: 133 LLEKTRSGKGQVVDAAMIDGASMLAAPIFGFMATGFWRQERGTNLLDGGAPFYDTYETAD 192
Query: 229 GRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEI 283
GR MAV LE QF+A+ A L E EL + + RA + +F + +A W E
Sbjct: 193 GRHMAVACLEPQFFAE-FARLLPLETELAAAQYDQARWPDMRAAIARRFGAQDRAFWIER 251
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA 343
F+N+DACV PVL+ +A +HPH+ R + + + G PAPAPR SRTPG + A
Sbjct: 252 FENSDACVAPVLTPGEAAAHPHSRARHAHV-EKHGFKRPAPAPRFSRTPGETA------A 304
Query: 344 PGVHTREVLRHFGYSDANIEELIREDVIEE 373
P + R FG S + L E +I E
Sbjct: 305 PAGAAVSLAR-FGISGEEQQRLAAEGIIGE 333
>gi|384103613|ref|ZP_10004585.1| putative alpha-methylacyl-CoA racemase [Rhodococcus imtechensis
RKJ300]
gi|383838852|gb|EID78214.1| putative alpha-methylacyl-CoA racemase [Rhodococcus imtechensis
RKJ300]
Length = 369
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 205/338 (60%), Gaps = 9/338 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPF--VQDTVGYGKKSLCINL 58
L G+ V+E A + P P M+L + GA V+R+D+ GA + +D + ++++ +L
Sbjct: 5 LAGVRVVELARIGPVPHAAMVLGDLGADVVRVDRPDSGASLYDRAEDHLFRNRRAVLADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A L ++ L +++DV+LE FR GV+E+L LGP+ ++ RL++ R++G+GQ GP
Sbjct: 65 KDAADLRRVRQLIDRADVVLEGFRPGVVERLGLGPEQCMATHSRLVFGRMTGWGQTGPSK 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G L +G + P P +L DFGGG ++ G++ AL ERS SGRG
Sbjct: 125 DGAGHDINYISLTGALHAIGRPGQPPAVPLSLVGDFGGGSMLLVTGVLAALVERSVSGRG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+G++ L + W RG N LDG + FY TYE DG+F+AVGALE
Sbjct: 185 QVIDAAMVDGASLLMQPVWGMFGAGFWQDERGTNFLDGASPFYRTYECADGKFVAVGALE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPV 294
QFYA LL GLG+ ++LP +L+E+F ++ W +F TDACVTPV
Sbjct: 245 PQFYAALLRGLGLEGDDLPAQHDRRSWPQLSERFAVIFAGHSRDHWGAVFAGTDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
LSL +A + H R + I + GVV APAPR SRTP
Sbjct: 305 LSLREAAQNQHLRDRQTLI-DVEGVVQAAPAPRFSRTP 341
>gi|335039685|ref|ZP_08532837.1| L-carnitine dehydratase/bile acid-inducible protein F
[Caldalkalibacillus thermarum TA2.A1]
gi|334180444|gb|EGL83057.1| L-carnitine dehydratase/bile acid-inducible protein F
[Caldalkalibacillus thermarum TA2.A1]
Length = 394
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 217/394 (55%), Gaps = 29/394 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRID-------------KHGAQPFVQDTVGY 49
L + VL+ + L P P+C M+L +FGA VI+I+ K G + + ++
Sbjct: 5 LHSLRVLDLSRLLPGPYCTMLLADFGAEVIKIEEPGLGDYARLYEPKLGTESAMFFSLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
KKSL +NLK +G ++ L +DV++E FR GVME+L LG + L NPRLIY ++
Sbjct: 65 NKKSLSVNLKDERGRAIFLELVKSADVLVESFRPGVMERLGLGYETLKAINPRLIYCAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY+ + GHDINYL +G+L L G R P P AD GGG LM A+GI++AL
Sbjct: 125 GYGQSGPYAHLPGHDINYLSFTGLLDLQGEREGKPVIPAVQIADIGGGALMAAVGILLAL 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKP---RGENLLDGGAHFYDTYET 226
R K+GRGQ ID +M++G + SWL + FL K RG+ L GG Y YET
Sbjct: 185 QARQKTGRGQFIDVSMMDG---VLSWLQTSLPAFLASKTLPWRGQLPLSGGLACYQVYET 241
Query: 227 KDGRFMAVGALESQFYAQLLAGLGMTEE----ELPQHEVETGRAKLTEKFKEKTQAEWCE 282
D RF+AVGALE +F+ +G E PQ E E +A + E K +TQAEW E
Sbjct: 242 ADQRFLAVGALEHKFWQVFCEEIGRPEYVSRLHAPQEEQEQMKADIAEIIKSRTQAEWLE 301
Query: 283 IFDNTDACVTPVLSLSQATSHPHNVHRGSFIP---NRAGVVAPAPAP-RLSRTPGTSKIT 338
F +ACVTPV +L +A P HR + G+V P +LS T G I
Sbjct: 302 RFQGKEACVTPVKNLEEALKDPQVNHREMIVEVEHPELGLVKQLGIPIKLSETSGA--IR 359
Query: 339 EHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
P G HT E+L GYS A I +L ++ VIE
Sbjct: 360 TLAPKRGEHTAELLAELGYSSAEIAQLRQDRVIE 393
>gi|322697070|gb|EFY88854.1| alpha-methylacyl-CoA racemase [Metarhizium acridum CQMa 102]
Length = 400
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/310 (46%), Positives = 197/310 (63%), Gaps = 13/310 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV--QDTVGYGKKSLCINLKK 60
L GITVLEFAGLAP PF GM+L + GA+VIR+D+ + D + K S+ ++LK
Sbjct: 9 LTGITVLEFAGLAPGPFAGMLLADAGASVIRVDRASDARSLPTADALTRHKASISVDLKS 68
Query: 61 AKGLSVMKNL-ANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G + +K L A +DV+++PFR GV+EKL LGP VL NPRL +G+ +DG Y++
Sbjct: 69 PSGTAFIKELVARGADVLIDPFRPGVLEKLGLGPPVLLGINPRL-----TGFRRDGRYAA 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINY+ +SG LSLLG P PP N+ ADF GGG G+++AL R +GRGQ
Sbjct: 124 MAGHDINYIAVSGALSLLGRAGDTPHPPANILADFAGGGANLFQGVLLALLARQTTGRGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V++ NMV+GSAYL ++ + + + RG NLLDGG +Y+TYETKDG + +VGALE
Sbjct: 184 VVEANMVDGSAYLATFPRLGLKSGVGARGRGRNLLDGGCPYYETYETKDGGYYSVGALEP 243
Query: 240 QFYAQL-----LAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
F+++L LAG G+ E+ E RA F+++T+AEW +FD TDAC PV
Sbjct: 244 HFFSRLVEGMGLAGRGLEEKRFDFDEWPAMRALFERTFRQRTRAEWEAVFDGTDACAAPV 303
Query: 295 LSLSQATSHP 304
L + S P
Sbjct: 304 LEYHELESDP 313
>gi|408527897|emb|CCK26071.1| Alpha-methylacyl-CoA racemase [Streptomyces davawensis JCM 4913]
Length = 377
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 211/364 (57%), Gaps = 10/364 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 10 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLAIDPAYDVTNRNKRSVLVDL 69
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +LA ++D+++E +R GV E+L +GP+ NPRL+Y R++G+GQDGP +
Sbjct: 70 KSPDGAARVLDLAARADILIEGYRPGVAERLGVGPEDCRARNPRLVYGRMTGWGQDGPLA 129
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L ++G P P NL D+ GG L +G++ AL +G G
Sbjct: 130 QRAGHDIGYIALTGTLGMIGAPGEPPPAPANLLGDYAGGSLYLVVGVLAALHHARATGTG 189
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+++L + + W R NLLDGG +Y TYET DG++MAVGALE
Sbjct: 190 QVVDAAIVDGTSHLAAMIHGMLAAGGWQDQRAANLLDGGCPYYGTYETADGKYMAVGALE 249
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFY L LG+ + + R +T +FK +T+ EW +F+++DACV PVL
Sbjct: 250 PQFYDTFLDLLGLDGYADARKDWARWGELREAVTARFKSRTREEWTAVFEDSDACVAPVL 309
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+L +A HPH RG+F + G+ PAPAPR S TP + + PG T +V R +
Sbjct: 310 TLREAPHHPHLAARGTFT-DHGGITQPAPAPRFSATP--TSVRSGPAQPGADTADVARDW 366
Query: 356 GYSD 359
D
Sbjct: 367 DAPD 370
>gi|442770353|gb|AGC71071.1| alpha-methylacyl-CoA racemase [uncultured bacterium A1Q1_fos_324]
Length = 416
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 219/381 (57%), Gaps = 21/381 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFV--QDTVGYGKKSLCIN 57
L G+ V+E G+ P PF M+L + GA VIR+D+ G Q +D +G G++S+ ++
Sbjct: 39 LAGVRVIELVGIGPGPFAAMLLADLGAEVIRVDRPKPGGLQVAAPERDLLGRGRRSVALD 98
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G V+ +L +D ++E FR GV E+L +GPD NPRL+Y R++G+GQDGP
Sbjct: 99 LKSERGRRVLLDLVAHADGLIEGFRPGVTERLGIGPDDCFAVNPRLVYGRMTGWGQDGPL 158
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINY+ +G L +G P P NL DF GG + G++ AL +G
Sbjct: 159 AHTAGHDINYIATAGALDPIGRAGGPPQVPLNLLGDFAGGSMYLVAGMLAALLHARSTGE 218
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L +T + W RG NLLD GA FYD Y T D R+M+VG L
Sbjct: 219 GQVVDAAIVDGAAHLLGMITTLHNNGSWSDQRGTNLLDTGAPFYDVYRTADDRWMSVGGL 278
Query: 238 ESQFYAQLLAGL---GMTEEELPQHEVET----GRAKLTEKFKEKTQAEWCEIFDNTDAC 290
E QF+A ++ L G T ++P + R +L F+++TQAEW +F+ T+AC
Sbjct: 279 EPQFWAAMIGILESQGFT--DIPDRNDPSLWSDLRTRLQAIFEQRTQAEWSSLFEGTEAC 336
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP-GVHTR 349
V PV+ L +A H H RG+++ + G V APAPR S TP + P P G TR
Sbjct: 337 VAPVVPLGEAPEHAHLKARGTYLKHE-GQVQAAPAPRFSVTPAKLGLA---PRPTGADTR 392
Query: 350 EVLRHFGYSDANIEELIREDV 370
VL +G D ++ LI + +
Sbjct: 393 AVLTDWGIDD--VDSLINDGI 411
>gi|148553965|ref|YP_001261547.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
gi|148499155|gb|ABQ67409.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
Length = 386
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 213/376 (56%), Gaps = 11/376 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLKKA 61
L G+ VL+ +GL PAPF M+L +FGA V+ + + PF + GK ++ ++L+
Sbjct: 12 LAGLRVLDLSGLGPAPFATMMLADFGAEVLSVRRPDPLPFDPAAAMARGKDAIGVDLRSP 71
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G +V + LA +D+ +E FR GVME+L LGP+VL NP LIYARL+G+GQ GPY+ A
Sbjct: 72 EGQAVARRLARSADIFVEGFRPGVMERLGLGPEVLMADNPGLIYARLTGWGQSGPYAKRA 131
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL +SG L+++G PT P L D G +G++MAL ER ++GRGQV+
Sbjct: 132 GHDINYLAISGALAVIG--EDKPTAPPGLLGDLANGSYTMMIGVLMALVERQRTGRGQVV 189
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D +V+G++Y+ + + LWD +L G A FY Y DG++ +VGA+E +F
Sbjct: 190 DAAIVDGASYMLGPMFGELELGLWDGDPDHAMLGGKAPFYGVYRCADGKWFSVGAIEQKF 249
Query: 242 YAQLLAGLGM------TEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
YA +L+ LG+ E ++ + R ++ F K QA W E F D+C PVL
Sbjct: 250 YAAMLSILGLDDVDPSAEAQMDRDRWPALRERIAAAFLTKPQAAWTEAFGAVDSCGAPVL 309
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+ + + PHN RG+ + G++ APAPRLS P +T NP +L
Sbjct: 310 AAGELAADPHNAARGTVTADGEGILTAAPAPRLSEHP--ELVTAPNPRGSRPADTILAEA 367
Query: 356 GYSDANIEELIREDVI 371
G++ I EL + +
Sbjct: 368 GFTADEIGELTAKKAV 383
>gi|393221421|gb|EJD06906.1| CoA-transferase family III [Fomitiporia mediterranea MF3/22]
Length = 401
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 219/403 (54%), Gaps = 48/403 (11%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+EFAGLAP PF G++L ++GA+VIRID+ + D + GK+S+ I+ K
Sbjct: 6 LAGIKVVEFAGLAPGPFAGLVLADYGASVIRIDRTSST-LPHDVLNRGKRSIAIDAKVPA 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS----NPRLIYARLSGYGQDGPYS 118
G ++ L +++DV+++PFR GV+EKL+LGPDV N +LIYAR+ G+ ++GPY
Sbjct: 65 GKELLLELISRADVLIDPFRPGVLEKLELGPDVFLNEEIGLNKKLIYARIHGFTRNGPYR 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+AGHDINY+ LSG LS+L P P NL ADF GGGL CALGI++AL R+ +G+G
Sbjct: 125 DVAGHDINYIALSGALSMLPGTPEKPAFPVNLLADFAGGGLTCALGILLALQSRNTTGKG 184
Query: 179 QVIDCNMVEGSAYLGSW-----LTRTQDTF---------LWDKPRGENLLDGGAHFYDTY 224
Q+++ +MV GS Y+ S+ L F W RG +LDGGA +Y+ Y
Sbjct: 185 QIVETDMVSGSRYVSSFPLLHSLIPNDLNFGNPNDNAKENWKNGRGTKILDGGAPYYNVY 244
Query: 225 ETKDGRFMAVGALESQFYAQLLAGL--GMTEEEL-------PQHEVETG-------RAKL 268
DGR+M VG LE+QF+ + + + L P E+ T RA L
Sbjct: 245 TCADGRWMTVGCLEAQFFRVFIEKFVDALPQSYLKEQGDWRPTMEMLTNEEHWPRFRAFL 304
Query: 269 TEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
F+ KT+ EW +F +DAC PVLS +A AG PAP P L
Sbjct: 305 DGGFRTKTRDEWASVFHGSDACAVPVLSPEEAA-------------KAAGSPIPAPHPIL 351
Query: 329 SRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
S + PG HT E+L G S + EL+R I
Sbjct: 352 SESQPAPPKEFTLLKPGQHTEEILNELGISGTTLAELVRSGAI 394
>gi|170742080|ref|YP_001770735.1| L-carnitine dehydratase/bile acid-inducible protein F
[Methylobacterium sp. 4-46]
gi|168196354|gb|ACA18301.1| L-carnitine dehydratase/bile acid-inducible protein F
[Methylobacterium sp. 4-46]
Length = 366
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 212/338 (62%), Gaps = 8/338 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQDTVGYGKKSLCINLKKA 61
L G+ ++EFAG+ P PF M+L + GA ++R+D+ G A P+ + + ++++ +LK
Sbjct: 13 LAGLRLVEFAGIGPGPFAAMLLADLGADILRVDRPGGADPYSRHVLTRSRRTVTADLKAP 72
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ + +++D ++E FR GVME+L LGP+V+ NPRL+Y R++G+GQ+GP ++ A
Sbjct: 73 GDRARVLACLDEADALIEGFRPGVMERLGLGPEVVLARNPRLVYGRMTGWGQEGPLAARA 132
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+ Y+ ++G L+ +G + +P PP NL DFGGG L A+GI+ + ++G GQV+
Sbjct: 133 GHDLTYIAVTGALAAIGPES-HPVPPLNLVGDFGGGALYLAMGILAGILSARRTGHGQVV 191
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
DC + +G+A L + + L + R NLLDGG +Y TY DGRF+A+ ALE F
Sbjct: 192 DCAICDGAASLMAMASDFAAQGLGTQAREANLLDGGTAYYRTYACADGRFVALAALEPHF 251
Query: 242 YAQLLAGLGMTEEELPQHEVETGRA---KLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+A+ +G+ E+ P + G A +L F +T+ WC + ++TD+C+ PVL+LS
Sbjct: 252 FAEFRRRVGL--EDDPAFDDRDGAALHRRLEALFLTRTRDAWCRLLEDTDSCLAPVLTLS 309
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK 336
+A SHPH RG+++ GV+ PAPAPR SR+P +
Sbjct: 310 EAPSHPHLAARGTYL-EVDGVMQPAPAPRFSRSPAAIR 346
>gi|374609318|ref|ZP_09682114.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium tusciae JS617]
gi|373552287|gb|EHP78897.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium tusciae JS617]
Length = 363
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 209/366 (57%), Gaps = 21/366 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L G+ V+E A + P P MIL + GA V+R+++ G + ++ ++S+ +L
Sbjct: 5 LHGLRVIELASIGPGPHAAMILGDLGADVVRVERPGKLGGIPTTKREAALRNRRSVTADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ L ++D+++E R GV E+L LGP K N RL+Y R++G+GQ GP
Sbjct: 65 KSDEGRELVLKLVAKADILIEGLRPGVTERLGLGPLDCAKVNERLVYGRMTGWGQTGPRR 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G+L +G P PP NL DFGGG + +GI+ AL+ER SG+G
Sbjct: 125 LQAGHDINYISLNGVLHSIGRAGERPVPPLNLTGDFGGGSMFLLVGILSALWERQTSGKG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D M++GS+ L + + LW RG N+LDGGA +YDTY DGR +A+GA+E
Sbjct: 185 QVVDAAMIDGSSVLAQMIWGFRQDGLWSDERGVNMLDGGAPYYDTYTCSDGRHIAIGAIE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
QFYA+++ GLG+ +LP + G RA +TE K + W ++F +TDACVTP
Sbjct: 245 PQFYAEMIKGLGLDGADLPDQN-DMGRWPELRAAITEAVAAKDRDHWAKVFADTDACVTP 303
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP----GVHTR 349
VLS + S H R +F + + P PAPR SR+ P P G T
Sbjct: 304 VLSFGEVESERHVSERDTFYRD-GDYLQPMPAPRFSRS------VPPTPTPPGQAGADTE 356
Query: 350 EVLRHF 355
VLR +
Sbjct: 357 AVLRDW 362
>gi|388854272|emb|CCF52191.1| probable alpha-methylacyl-coa racemase [Ustilago hordei]
Length = 438
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/405 (39%), Positives = 234/405 (57%), Gaps = 58/405 (14%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINL 58
+ L GI V+EF+GLAP PF GM+L +FGA VIRIDK G P D++ GK+S ++
Sbjct: 19 LPLAGIKVIEFSGLAPGPFVGMVLADFGADVIRIDKTKSGLNP---DSLCRGKRSFAVSP 75
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPR-LIYARLSGYGQDGPY 117
K A+G +++ L +D++++PFR GV+E+L LGP K + LI+ARL+G+ + GPY
Sbjct: 76 KSAEGQALITQLIKSADIVIDPFRPGVLERLGLGPQNFEKQIGKGLIFARLTGFQRTGPY 135
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
S+MAGHDINY+ LSG+LS+LG P PP NL DF GG ++C LGI++AL ER++S +
Sbjct: 136 SNMAGHDINYIALSGLLSMLGNAGGKPQPPSNLLGDFAGGSMICLLGILLALVERARSSQ 195
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFL----W--------DKPRGENLLDGGAHFYDTYE 225
GQ+++ +MV G+ Y+ +++ + ++L W D+ RG N LDGGA +Y Y
Sbjct: 196 GQIVEADMVTGARYVSTFILLS--SYLSHPSWGAIHSDGLDETRGRNTLDGGAPWYRVYA 253
Query: 226 TKDGRFMAVGALESQFYAQLLAGLGMTEEELP----------QHEVETG---RAKLTEKF 272
KDG +M+VGA+E FY +LL L + P QH+ ++ + LT F
Sbjct: 254 CKDGGYMSVGAIERHFYQELLQILRKVLPKAPQGTQHPSASTQHDRDSWPELQRYLTACF 313
Query: 273 KEKTQAEWCEIFDNTDACVTPVLSLSQA-------TSHPHNVHRGSFIPNRAGVVAPAPA 325
+ ++EW F TDAC PVL+ QA ++P++V G I P+PA
Sbjct: 314 AQLPRSEWERHFIRTDACTVPVLTRDQAAIAGVLPAANPNHVADGKPI-------IPSPA 366
Query: 326 PRLSRTPGT-----------SKITEHNPAPGVHTREVLRHFGYSD 359
P+LSRTP + E PG HT ++L G SD
Sbjct: 367 PKLSRTPAKPPSGSPGGEWQEESAEMFLTPGEHTDDILLELGVSD 411
>gi|258651211|ref|YP_003200367.1| L-carnitine dehydratase/bile acid-inducible protein F [Nakamurella
multipartita DSM 44233]
gi|258554436|gb|ACV77378.1| L-carnitine dehydratase/bile acid-inducible protein F [Nakamurella
multipartita DSM 44233]
Length = 385
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/338 (44%), Positives = 204/338 (60%), Gaps = 9/338 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ----PFVQDTVGYGKKSLCINL 58
L G+ V+E G+ P P GM+L + GA V+RI + G P +D + G + +L
Sbjct: 5 LAGLRVVELGGIGPVPHAGMVLADLGADVVRIQRPGGGLDTGPPDRDVLLRGCRLRSADL 64
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
G++ + +DV++E FR GV E+L +GP+V P LIY RL+G+GQDGP++
Sbjct: 65 STPAGVADVLAEIAAADVLVEGFRPGVAERLGVGPEVCLARRPELIYCRLTGWGQDGPWA 124
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
GHDINYL L+G L LG P P NL ADFGGG ++ +GI+ AL+ER++SGRG
Sbjct: 125 GRVGHDINYLALTGTLDALGAAGGPPQLPANLVADFGGGSMLAVVGILAALYERARSGRG 184
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID MV+G L + + W RG NLLDGGA FY Y DGR++AVGALE
Sbjct: 185 QVIDAAMVDGVELLSQLMWSMRGQGWWPGERGTNLLDGGAPFYAVYPCADGRYVAVGALE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
FYA LLAGLG+ + +LP ++G R + + F +A W +FD TDACVTPV
Sbjct: 245 PPFYAALLAGLGLADADLPAQLDQSGWPGLRRAIGQAFASAPRAHWLGVFDGTDACVTPV 304
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
L+ ++A HPH + RG+ + G+V APAPR SRTP
Sbjct: 305 LTAAEAARHPHLLARGTLV-EVDGIVQAAPAPRFSRTP 341
>gi|330468652|ref|YP_004406395.1| L-carnitine dehydratase/bile acid-inducible protein F
[Verrucosispora maris AB-18-032]
gi|328811623|gb|AEB45795.1| L-carnitine dehydratase/bile acid-inducible protein F
[Verrucosispora maris AB-18-032]
Length = 391
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 214/376 (56%), Gaps = 17/376 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-------AQPFVQDTVGYGKKSLC 55
L G+ V+E AG+ P PF M+L + GA VIR+D+ G P D + G++S+
Sbjct: 13 LTGVRVIELAGIGPGPFAAMMLADLGADVIRVDRVGDVDPSGFGTPH-PDLLNRGRRSIA 71
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L+ G V L +D ++E FR GV E+L LGP NPRL+Y R++G+GQDG
Sbjct: 72 VDLRSTDGREVALALIGDADALIEGFRPGVTERLGLGPADCHAVNPRLVYGRMTGWGQDG 131
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
PY+ AGHDI YL L+G+L +G P PP NL DFGGGG+M ALG+V AL+
Sbjct: 132 PYAPYAGHDITYLALTGVLHGIGRAAEPPVPPLNLLGDFGGGGMMLALGVVAALYAVRGG 191
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GQV+D +V+G A L + + + +W PRG NLLDGGA FYD+YE DGR++AVG
Sbjct: 192 AAGQVVDAAIVDGVAVLSTQIHALRRLGMWQDPRGVNLLDGGAPFYDSYECADGRYIAVG 251
Query: 236 ALESQFYAQLL--AGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDA 289
ALE +FY +L+ G + +E P RA F+ + + EW + +D+
Sbjct: 252 ALEPKFYDELVRRTGFPLPPDEAPDRTDPANWPALRAAWARLFRTRPRDEWAALLAASDS 311
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
C+ PVL +A HP R +F+ + GV PAPAPR S +P + + P PG HT
Sbjct: 312 CLAPVLDWQEAPEHPQLAARRTFVVHD-GVRQPAPAPRFSGSP--TAVRRPPPWPGEHTD 368
Query: 350 EVLRHFGYSDANIEEL 365
EVL GY + +L
Sbjct: 369 EVLDEIGYPADRVAQL 384
>gi|342870568|gb|EGU73665.1| hypothetical protein FOXB_15834 [Fusarium oxysporum Fo5176]
Length = 315
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/303 (45%), Positives = 199/303 (65%), Gaps = 11/303 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E AGLAP PFCG +L+ +GA+V+R+D+ G QD + K S+ ++LK
Sbjct: 4 LTGLRVVELAGLAPGPFCGQLLSSYGASVLRVDRAGVYEN-QDILTSYKSSIVLDLKSRH 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ ++K L +++D++++PFR GV+E+L L P VL SNPRLI R++G+ +DGPY MA
Sbjct: 63 CIRLLKGLLDKADILIDPFRPGVLERLGLCPSSVLLVSNPRLIVVRITGFRRDGPYKDMA 122
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL +SG+LS LG P+ P NL AD+ GGGL+ G++MAL+ R +G+GQV+
Sbjct: 123 GHDINYLAVSGVLSKLGSSGLPPSAPGNLLADYAGGGLVAFAGVLMALYHRGSTGKGQVV 182
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQ 240
+ +MV+G +Y+G+ D W+ +G NLLDGG +Y YE KD GR+++VGALE Q
Sbjct: 183 EASMVDGVSYIGTIPRLRSDEPAWNGGKGTNLLDGGCPYYQCYECKDEGRYISVGALEPQ 242
Query: 241 FYAQLLAGLGMTEEEL--PQHEVETGRA------KLTEKFKEKTQAEWCEIFDNTDACVT 292
F+ LL GLG+T + + P E R+ + FKEKT+ EW IFD +ACV
Sbjct: 243 FFENLLQGLGLTSDNILSPGLRREDKRSWPRMQEVFVKTFKEKTREEWEHIFDGLNACVA 302
Query: 293 PVL 295
PVL
Sbjct: 303 PVL 305
>gi|290955883|ref|YP_003487065.1| fatty acid-coA racemase [Streptomyces scabiei 87.22]
gi|260645409|emb|CBG68495.1| putative fatty acid-coA racemase [Streptomyces scabiei 87.22]
Length = 403
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 208/361 (57%), Gaps = 10/361 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G + D K+S+ ++L
Sbjct: 12 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGTGLAVNPLYDVTNRNKRSVLVDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G ++ +LA ++D+++E +R GV E+L +GP NP L+Y R++G+GQ GP +
Sbjct: 72 KSPAGPDLVLDLAERADILIEGYRPGVAERLGVGPATCHARNPALVYGRMTGWGQQGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ +G L ++G + P P NL D+ GG L +G++ AL +G G
Sbjct: 132 QRAGHDIAYIAPTGALGMIGAPDTPPPAPANLLGDYAGGSLYLVVGVLAALHHARATGTG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + L W R NLLDGG FY TYET DGR+MAVGALE
Sbjct: 192 QVVDAAIVDGTAHLSAMLHGMLAAGRWQDRRAANLLDGGCPFYGTYETADGRYMAVGALE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFY + + LG+ + + +V RA + +F +T+ EW +F+ +DACV PVL
Sbjct: 252 QQFYDEFVELLGIADRAPARKDVAAWDELRATVAARFATRTRDEWTAVFEGSDACVAPVL 311
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
SL +A H H RG+F + G+ PAPAPR S TP + + PG T +V +
Sbjct: 312 SLGEAPHHTHLAARGTFT-DFGGITQPAPAPRFSATP--TSVRSGPAQPGADTADVAHDW 368
Query: 356 G 356
G
Sbjct: 369 G 369
>gi|334343838|ref|YP_004552390.1| alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
gi|334100460|gb|AEG47884.1| Alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
Length = 367
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 200/335 (59%), Gaps = 5/335 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EF G+ P P+CG +L E GA V+ I++ G + +GK L +++++ +
Sbjct: 13 LAGVRVVEFGGIGPGPYCGQLLAEMGAEVLVIEREGGNGWPNPITDHGKARLVLDIRRPE 72
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + L +DV++E FR GVME+L LGPD NPRLIY R++G+GQ+GP + AG
Sbjct: 73 GKTRALELMALADVVIEGFRPGVMERLGLGPDAALSCNPRLIYGRMTGWGQEGPLAHAAG 132
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G PP NL DFGGG L A GI AL ER +SG GQVID
Sbjct: 133 HDINYIAITGALAAMGREGEPSIPPLNLVGDFGGGSLFLAFGIAAALVERERSGLGQVID 192
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G + S+ + Q R +NLL G A FY YE DG+ +AVGALE QF+
Sbjct: 193 AAIVDGVTSMMSFFSGLQKNRSISLERSKNLLGGAAPFYRCYECADGKQVAVGALEPQFF 252
Query: 243 AQLLAGLGMTEEELP-QHEVETGRAK---LTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+L+ +G + L Q++ T + + F+ KTQAEWC + + +DAC PVL+L
Sbjct: 253 KELVERMGAPVDWLADQNDPATWPERTQVMAAIFRSKTQAEWCALLEGSDACFAPVLTLG 312
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
+A + + R S + + G+ PAP PR SRTPG
Sbjct: 313 EAEASTYLRARRSIV-DDDGMARPAPCPRFSRTPG 346
>gi|238064424|ref|ZP_04609133.1| L-carnitine dehydratase/bile acid-inducible protein F
[Micromonospora sp. ATCC 39149]
gi|237886235|gb|EEP75063.1| L-carnitine dehydratase/bile acid-inducible protein F
[Micromonospora sp. ATCC 39149]
Length = 407
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 214/372 (57%), Gaps = 15/372 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-GAQPFV-----QDTVGYGKKSLCI 56
L G+ V+E AG+ P PF M+L + GA VIR+D+ G P D + G++S+ +
Sbjct: 29 LAGVRVVELAGIGPGPFAAMMLADLGADVIRVDRATGVDPGAFGTPHPDLLNRGRRSVAV 88
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK A G + L + ++E FR GV E+L LGP NPRL+Y R++G+GQDGP
Sbjct: 89 DLKSAGGREAVLALLGGAGALIEGFRPGVTERLGLGPADCLAVNPRLVYGRMTGWGQDGP 148
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDI+YL L+G L +G P PP NL DFGGGG+M ALG+V AL+
Sbjct: 149 LAQYAGHDIDYLALTGALHGIGRAGERPVPPMNLLGDFGGGGMMLALGVVAALYAVRAGA 208
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+G + L + + + +W PRG NLLDGGA FYDTYE DGR +AVGA
Sbjct: 209 PGQVVDAAIVDGVSVLSTMIHSLRGVGMWQDPRGVNLLDGGAPFYDTYECADGRHLAVGA 268
Query: 237 LESQFYAQLL--AGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
LES+FY +L+ G + ++ P+ RA F+ +T+ EW + +DAC
Sbjct: 269 LESRFYDELVRRTGFPLPGDDAPERTDPANWPALRAAWARLFRTRTRDEWTALLGASDAC 328
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
V PVL +A HPH R F+ + AG PAPAPR S TP + + P PG HT E
Sbjct: 329 VAPVLDWREAPEHPHLAARQVFVAH-AGATQPAPAPRFSGTP--TALRRPPPHPGEHTDE 385
Query: 351 VLRHFGYSDANI 362
VL G++ I
Sbjct: 386 VLSEAGFAADRI 397
>gi|33595292|ref|NP_882935.1| CaiB/BaiF family protein [Bordetella parapertussis 12822]
gi|33565369|emb|CAE36172.1| CaiB/BaiF family protein [Bordetella parapertussis]
Length = 391
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 203/341 (59%), Gaps = 12/341 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L G+ V+E AG+ P P GM L + GATVIR+D+ GA VQ +G +KS+ +
Sbjct: 14 LAGVKVVEIAGIGPGPLAGMFLADLGATVIRVDRKQPSGLGAPRPVQFDLGLRNRKSIRV 73
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ L Q+D ++E FR GVME+L LGPD NPRL+Y R++G+GQ+GP
Sbjct: 74 DLKDPAAVEMVLELLGQADALIEGFRPGVMERLGLGPDACLARNPRLVYGRVTGWGQEGP 133
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 134 LAKAAGHDLNYISITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARGSG 193
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A L + + + K RG NL+D GA Y+ YE DG++++V
Sbjct: 194 KGQVVDAAMVDGVASLMTVIMGMHGAGMHGKQRGTNLVDTGAPCYEVYECADGKYVSVAP 253
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E +FY LL L + + L Q +++ + L +F+E+T EW E+ +DAC+
Sbjct: 254 IEDKFYRLLLEKLQLQDHPLLQEQMDRAAWPQAKQVLAARFRERTCDEWTELLGASDACL 313
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
PVL +A +HPH RG+ + GVV PAP PR SRTP
Sbjct: 314 APVLDFDEALAHPHIRQRGTLT-DIEGVVHPAPGPRFSRTP 353
>gi|33599583|ref|NP_887143.1| CaiB/BaiF family protein [Bordetella bronchiseptica RB50]
gi|412340143|ref|YP_006968898.1| CaiB/BaiF family protein [Bordetella bronchiseptica 253]
gi|427812826|ref|ZP_18979890.1| CaiB/BaiF family protein [Bordetella bronchiseptica 1289]
gi|33567179|emb|CAE31093.1| CaiB/BaiF family protein [Bordetella bronchiseptica RB50]
gi|408769977|emb|CCJ54763.1| CaiB/BaiF family protein [Bordetella bronchiseptica 253]
gi|410563826|emb|CCN21364.1| CaiB/BaiF family protein [Bordetella bronchiseptica 1289]
Length = 391
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 203/341 (59%), Gaps = 12/341 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L G+ V+E AG+ P P M L + GATVIR+D+ GA VQ +G +KS+ +
Sbjct: 14 LAGVKVVEIAGIGPGPLAAMFLADLGATVIRVDRKQPSGLGAPRPVQFDLGLRNRKSIRV 73
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ L Q+D ++E FR GVME+L LGPD NPRL+Y R++G+GQ+GP
Sbjct: 74 DLKDPAAVEMVLELLGQADALIEGFRPGVMERLGLGPDACLARNPRLVYGRVTGWGQEGP 133
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 134 LAKAAGHDLNYISITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARGSG 193
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A L + + + K RG NL+D GA Y+ YE DG++++V
Sbjct: 194 KGQVVDAAMVDGVASLMTVIMGMHGAGMHGKQRGTNLVDTGAPCYEVYECADGKYVSVAP 253
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E +FY LL L + + L Q +++ + L +F+E+T+ EW E+ +DAC+
Sbjct: 254 IEDKFYRLLLEKLQLQDHPLLQEQMDRAAWPQAKQVLAARFRERTRDEWTELLGASDACL 313
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
PVL +A +HPH RG+ + GVV PAP PR SRTP
Sbjct: 314 APVLDFDEALAHPHIRQRGTLT-DIEGVVHPAPGPRFSRTP 353
>gi|294867708|ref|XP_002765197.1| Alpha-methylacyl-CoA racemase, putative [Perkinsus marinus ATCC
50983]
gi|239865192|gb|EEQ97914.1| Alpha-methylacyl-CoA racemase, putative [Perkinsus marinus ATCC
50983]
Length = 376
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 219/351 (62%), Gaps = 21/351 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKK-SLCINLKKA 61
L G+TV+EF GLAPAPFCGM+L +FGATV+RID+ G + D G K ++ I++K A
Sbjct: 10 LSGVTVIEFGGLAPAPFCGMVLADFGATVVRIDRIGDDHY--DVFDRGNKINIKIDIKSA 67
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQ--DGPYS 118
G +++ L +DV+++P+R GV++ L GP VL N R+IY +L+GYGQ D P
Sbjct: 68 LGGKIIRELLRSADVLIDPYRPGVLDNLGFGPTQVLENINSRIIYTQLTGYGQSKDTPER 127
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ SG+L LL N PP NL ADF GGGLMCALG+++AL R ++G G
Sbjct: 128 QYAGHDINYIAASGVLDLL----PNRLPPINLLADFAGGGLMCALGVLLALRRRDRTGTG 183
Query: 179 QVIDCNMVEGSAYLGSWL---TRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
+VIDCNMV G AYL ++L + L ++ G +L +HFY+ YET DGR +AVG
Sbjct: 184 EVIDCNMVHGVAYLSTFLYGMIAKETPVLNERKNGGGILRFESHFYNVYETLDGRHLAVG 243
Query: 236 ALESQFYAQLLAGLGM-TEEELPQHEVETGR----AKLTEK-FKEKTQAEWCEIFDNTDA 289
A+E +FY + L G+ + +EE V++ R K T K K K+ EW IFD ++
Sbjct: 244 AIERKFYQKFLQGMHVEDDEEFIVGYVDSSRWPGLIKRTRKIIKGKSMEEWMGIFDLRES 303
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEH 340
CV+PVL++ +A +P+ G +P RA V+ + ++S T++I ++
Sbjct: 304 CVSPVLTIDEAERNPNLFSPGGKLPKRAPVLKGSAVEKISSR--TTEIMDY 352
>gi|410418366|ref|YP_006898815.1| CaiB/BaiF family protein [Bordetella bronchiseptica MO149]
gi|408445661|emb|CCJ57322.1| CaiB/BaiF family protein [Bordetella bronchiseptica MO149]
Length = 391
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 204/341 (59%), Gaps = 12/341 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L G+ V+E AG+ P P M L + GATVIR+D+ GA VQ +G +KS+ +
Sbjct: 14 LAGVKVVEIAGIGPGPLAAMFLADLGATVIRVDRKQPSGLGAPRPVQFDLGLRNRKSIRV 73
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ L Q+D ++E FR GVME+L LGPD NPRL+Y R++G+GQ+GP
Sbjct: 74 DLKDPAAVEMVLALLEQADALIEGFRPGVMERLGLGPDACLARNPRLVYGRVTGWGQEGP 133
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 134 LARVAGHDLNYISITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARGSG 193
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A L + + + K RG NL+D GA Y+ YE DG++++V
Sbjct: 194 KGQVVDAAMVDGVASLMTVIMGMHGAGMHGKQRGTNLVDTGAPCYEVYECADGKYVSVAP 253
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E +FY LL L + + L Q +++ + L +F+E+T+ EW E+ +DAC+
Sbjct: 254 IEDKFYRLLLEKLQLQDHPLLQEQMDRAAWPQAKQVLAARFRERTRDEWTELLGASDACL 313
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
PVL +A +HPH RG+ + GVV PAP PR SRTP
Sbjct: 314 APVLDFDEALAHPHIRQRGTLT-DIDGVVHPAPGPRFSRTP 353
>gi|397728933|ref|ZP_10495723.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
gi|396935218|gb|EJJ02338.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
Length = 355
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 204/335 (60%), Gaps = 12/335 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
+ G+ V+E A + P+ M+L + GA V+R+ + G P + + GK+ + ++LK
Sbjct: 1 MIGLRVVELANIGPSAHAAMVLADLGADVVRVQRPGLLPEDHTSAEHLHRGKRVVEVDLK 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
++G + + LA+ +DV++E FR GV+E+L LGP ++ + P L+YAR++G+GQDGP +
Sbjct: 61 DSRGAADVLALASGADVLVEGFRPGVVERLGLGPAIVLEHVPSLVYARVTGWGQDGPRAD 120
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDIN++ +GIL +G P PP N+ A F GG + GI+ AL+ER +SG GQ
Sbjct: 121 KAGHDINFIAPTGILHSIGRGQERPVPPLNVVAGFAGGSMFMVTGILSALWERQRSGLGQ 180
Query: 180 VIDCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
V+D + EG+A L +W R Q + W RG NL+DG F+DTYE DG +MAVGA
Sbjct: 181 VVDVSAAEGAAVLTQHAWSMRGQGS--WSDERGANLVDGSCPFWDTYECSDGHYMAVGAF 238
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFY +L+A LG+ LP + R +L +F +++AEW F + DACVTP
Sbjct: 239 EPQFYDRLIAVLGLDPNTLPDRNDRSRWPELRVQLAARFTTRSRAEWAAAFADVDACVTP 298
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
V S ++A + PH RGSF+ GVV P PAPR
Sbjct: 299 VSSFAEAPTDPHFSTRGSFV-EIDGVVQPMPAPRF 332
>gi|297189983|ref|ZP_06907381.1| L-carnitine dehydratase [Streptomyces pristinaespiralis ATCC 25486]
gi|297150329|gb|EDY62548.2| L-carnitine dehydratase [Streptomyces pristinaespiralis ATCC 25486]
Length = 387
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 220/379 (58%), Gaps = 14/379 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINLKK 60
L G+ V+E G+ P PFCGM+L + GA VIRID+ +P + + S+ ++LK
Sbjct: 14 LAGVRVIELGGIGPGPFCGMLLADLGAEVIRIDRPAEAGRPNSMPVLHRNRLSITVDLKS 73
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+G+ V++ LA SDV E FR GV E+L LGPD L NPRL+Y R++G+GQDGP +
Sbjct: 74 REGIEVIRTLAGTSDVAFEGFRPGVAERLGLGPDDLIARNPRLVYGRMTGWGQDGPLAQD 133
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
GHDINY+ LSG L +G P P NL DFGGGG++ ALGI+ A+ +GRGQV
Sbjct: 134 PGHDINYIALSGALHSIG-TPETPVVPLNLIGDFGGGGMLLALGILSAVISARTTGRGQV 192
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D M +GSA L + + + +W R N LDGGA +Y Y DGR ++VG +E Q
Sbjct: 193 VDAAMTDGSATLLAMMYGFIASDMWTDERASNFLDGGAPYYGVYRCSDGRHLSVGPVEPQ 252
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRA-------KLTEKFKEKTQAEWCEIFDNTDACVTP 293
FYA LL LG+ ++ P + RA KLT+ F +T+ EW + F+ +ACV P
Sbjct: 253 FYANLLRVLGIADD--PDFAGQNDRAKWPVMKQKLTDLFATRTRDEWAKEFEGQEACVAP 310
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VLSL +A HPHN+ RG++ G V PAP+PR S T + P G HT +VL
Sbjct: 311 VLSLLEAPQHPHNLARGTYRTGAHGGVEPAPSPRFSGT--PTPEPSPAPPVGAHTDQVLT 368
Query: 354 HFGYSDANIEELIREDVIE 372
G + ++ L +++
Sbjct: 369 EAGLTADHLAALRANGIVK 387
>gi|226361950|ref|YP_002779728.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
gi|226240435|dbj|BAH50783.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
Length = 383
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 216/379 (56%), Gaps = 12/379 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L G+ ++E AG+ P PF GM+L + GA VI +++ G P+ G ++S+ ++LK
Sbjct: 9 LAGVRIVELAGIGPGPFTGMMLADLGAEVICVERPGGNPWAASGHGVMFRSRRSIAVDLK 68
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
++G +++ L +D I+E FR GV E+L +GP NP L+Y R++G+GQDGP +S
Sbjct: 69 SSRGAEIVRRLCENADGIVETFRPGVAERLGVGPADCMAVNPALVYGRMTGWGQDGPLAS 128
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
M GHDINY+ L+G L +G R P PP NL DFGGGG++ +G++ + +G G+
Sbjct: 129 MPGHDINYIALTGALHAIGRRGEAPVPPLNLVGDFGGGGMLLTVGMLAGIMSARTTGVGR 188
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M++G++ L + + + + RG +LLD GA FYD Y T+D +++++GA+E
Sbjct: 189 VVDAAMIDGASALMAMFHGLRGEGTFTENRGTHLLDAGAFFYDVYRTRDDQWVSIGAIED 248
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAK-----LTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+ L L + E+L ++ +T R L + +AE + + C PV
Sbjct: 249 QFWQDLCDALEL-PEDLRHNQFDTTRWNEFRDVLGRRIATFDRAELDALLLGRNTCYAPV 307
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
L+L+ A +HPH+V RG+FI G+V APAPR P T PG TR++L
Sbjct: 308 LTLADAAAHPHHVARGTFI-EVDGIVQAAPAPRFDGAPATKPGPPRK--PGADTRQILVD 364
Query: 355 FGYSDANIEELIREDVIEE 373
GY A IEEL+ E
Sbjct: 365 AGYDAAEIEELVSSGAAAE 383
>gi|452749386|ref|ZP_21949151.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri NF13]
gi|452006803|gb|EMD99070.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri NF13]
Length = 360
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 198/346 (57%), Gaps = 17/346 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+G+ VLEFAG+ P P C M+L + GA V+RI++ G + V G+K ++++
Sbjct: 12 LQGLRVLEFAGIGPGPHCAMLLADMGAEVLRIEREGGNGWPNPVVDRGRKLATLDIRSDA 71
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G LA +DV++E FR GVME+L LGPD L + NPRLIY R++G+GQ GP + AG
Sbjct: 72 GRERCLELAQTADVLIEGFRPGVMERLGLGPDELLQRNPRLIYGRMTGWGQSGPLAKAAG 131
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ + + PP NL DFGGG L A+GI+ AL+ER +SG+GQVID
Sbjct: 132 HDINYIALTGALAAIRGESGTAIPPLNLVGDFGGGSLYLAVGILAALWERERSGQGQVID 191
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G + L ++ + D R N L G A Y Y DGR +A+G LE QF+
Sbjct: 192 AAIVDGVSSLMTFFAGLLPSGRIDMQRERNPLAGAAPNYRCYRCADGREIAIGPLEPQFW 251
Query: 243 AQLL----------AGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+LL AG + Q E +L F TQ EWC + + +DAC
Sbjct: 252 RELLERIDAPEALWAGCADPADWPAQAE------RLERLFAAHTQVEWCALLEGSDACFA 305
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
PVL L +A HPH RG + GVV APAPR SRTPG ++ T
Sbjct: 306 PVLELEEAAQHPHLRQRGVY-QEIEGVVQAAPAPRFSRTPGKARRT 350
>gi|295835567|ref|ZP_06822500.1| alpha-methylacyl-CoA racemase [Streptomyces sp. SPB74]
gi|295825558|gb|EFG64314.1| alpha-methylacyl-CoA racemase [Streptomyces sp. SPB74]
Length = 399
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/336 (41%), Positives = 203/336 (60%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQPFVQDTVGYGKKSLCI 56
L G+ VLE AGL P PF M+L + GA V+R+D+ G P D GK+S+ +
Sbjct: 11 LAGVRVLELAGLGPGPFAAMLLADLGADVVRVDRPERGGMFGMDPAC-DFTNRGKRSVAL 69
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G + + LA ++D+++E FR GV E+L +GP +NPRL+Y R++G+GQDGP
Sbjct: 70 DLKTEEGAAAVLALAERADILVEGFRPGVAERLGVGPAQALAANPRLVYGRVTGWGQDGP 129
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+ YL +G L+L G P+ P NL DF GG L +G++ AL ++G
Sbjct: 130 LAPRAGHDLTYLAPTGALALGGSPEEPPSFPANLLGDFAGGSLYLVVGLLAALRHAERTG 189
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+G+A+L + L W RG NLLDGG+ FY YET DG++MAVGA
Sbjct: 190 EGQVVDAAIVDGAAHLTTLLHGLMAAGGWQDRRGSNLLDGGSPFYGCYETADGQYMAVGA 249
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
LE +FY + LG+ + + + + RA++ F +T+AEW ++F ++D CV P
Sbjct: 250 LEKRFYHEFTERLGIADTAPAREDFDHWDELRARIAAAFATRTRAEWTKVFADSDGCVAP 309
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS 329
VLSL +A HPH R +F+P G PAPAPR S
Sbjct: 310 VLSLREAPHHPHLAVRNTFVPGPDGTPQPAPAPRFS 345
>gi|427817839|ref|ZP_18984902.1| CaiB/BaiF family protein [Bordetella bronchiseptica D445]
gi|410568839|emb|CCN16906.1| CaiB/BaiF family protein [Bordetella bronchiseptica D445]
Length = 391
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 203/341 (59%), Gaps = 12/341 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L G+ V+E AG+ P P M L + GATVIR+D+ GA VQ +G +KS+ +
Sbjct: 14 LAGVKVVEIAGIGPGPLAAMFLADLGATVIRVDRKQPSGLGAPRPVQFDLGLRNRKSIRV 73
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ L Q+D ++E FR GVME+L LGPD NPRL+Y R++G+GQ+GP
Sbjct: 74 DLKDPAAVEMVLALLEQADALIEGFRPGVMERLGLGPDACLARNPRLVYGRVTGWGQEGP 133
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 134 LARVAGHDLNYISITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARGSG 193
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A L + + + K RG NL+D GA Y+ YE DG++++V
Sbjct: 194 KGQVVDAAMVDGVASLMTVIMGMHGAGMHGKQRGTNLVDTGAPCYEVYECADGKYVSVAP 253
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E +FY LL L + + L Q +++ + L +F+E+T+ EW E+ +D C+
Sbjct: 254 IEDKFYRLLLEKLQLQDHPLLQEQMDRAAWPQAKQVLAARFRERTRDEWTELLGASDVCL 313
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
PVL +A +HPH RG+ + GVV PAP PR SRTP
Sbjct: 314 APVLDFDEALAHPHIRQRGTLT-DIEGVVHPAPGPRFSRTP 353
>gi|302684425|ref|XP_003031893.1| hypothetical protein SCHCODRAFT_109264 [Schizophyllum commune H4-8]
gi|300105586|gb|EFI96990.1| hypothetical protein SCHCODRAFT_109264, partial [Schizophyllum
commune H4-8]
Length = 377
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/401 (40%), Positives = 222/401 (55%), Gaps = 60/401 (14%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+EFAGLAP PF G+IL + GA+V+R+DK GAQ D + GK+S+ I+ K
Sbjct: 1 MALSGVKVVEFAGLAPGPFAGLILADHGASVVRVDKPGAQSL--DVLARGKRSIAISPKT 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS---NPRLIYARLSGYGQDGPY 117
G V+K + SDV+++PFR GV+E+L L PDV N RLIYAR++G+ DGP
Sbjct: 59 PSGRDVLKKIIAASDVLIDPFRPGVLERLGLSPDVFLGEEGLNKRLIYARIAGFSLDGPE 118
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+MAGHDINYL LSG+L +L ++ PT P NL ADF GGGL LGIV+AL ++GR
Sbjct: 119 KNMAGHDINYLALSGVLDMLPGESK-PTFPLNLLADFAGGGL---LGIVLAL----RTGR 170
Query: 178 GQVIDCNMVEGSAYLGSW------LTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
GQV+ +MV G+ Y+ S+ L F+ + RG N+LDG A FYD Y KDGR+
Sbjct: 171 GQVVQTDMVSGARYVSSFPLLHKALAPASPMFVSE--RGHNVLDGAAPFYDVYVCKDGRY 228
Query: 232 MAVGALESQFYAQ--------LLAGLG------------MTEEELPQHEVETGRAKLTEK 271
M+VG LE QFYA+ L AG M E PQ R L
Sbjct: 229 MSVGCLEPQFYAEFTRRFTGALPAGFTGEGGWTPPADAQMLRELWPQL-----RNYLQSG 283
Query: 272 FKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
F + + W ++F +DAC PVLS +A HR + +P P P +
Sbjct: 284 FATQPRDYWAKVFQGSDACAVPVLSPKEAA------HRYTAVPK--------PHPSIDEP 329
Query: 332 PGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
S ++ PG HT E+L +G + + E L R+ ++
Sbjct: 330 RPVSDLSASFVPPGAHTEEILHEYGIASEDRERLRRDHALD 370
>gi|449543172|gb|EMD34149.1| hypothetical protein CERSUDRAFT_117638 [Ceriporiopsis subvermispora
B]
Length = 420
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 202/332 (60%), Gaps = 26/332 (7%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH---GAQPFVQDTVGYGKKSLCIN 57
+ L GI V+EFAGLAP P G IL +FGA V+ +D+ G VQD + GK+++ I+
Sbjct: 13 LPLSGIRVVEFAGLAPGPMAGKILADFGADVVLVDRPVSPGQTRIVQDVLARGKRAIAID 72
Query: 58 LKKA-KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCK---SNPRLIYARLSGYGQ 113
K+ G +V+ L ++D++++PFR GV+E+L LGPDV +N RL+YARL G+ +
Sbjct: 73 TKQVPSGRAVLMKLIGRADILIDPFRPGVIERLGLGPDVFLGDGGNNSRLVYARLVGFPR 132
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GPY MAGHD+NYL LSG+LS+L + P P N+ ADF GGG+MCALGI++AL ER
Sbjct: 133 TGPYKDMAGHDVNYLALSGVLSMLPGEGK-PEFPLNILADFAGGGVMCALGILLALLERY 191
Query: 174 KSGRGQVIDCNMVEGSAYLGSW---LTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGR 230
SGRGQV+DC+MV G+ Y+ SW + + PRGEN+LDGGA FY+ Y DGR
Sbjct: 192 ASGRGQVVDCDMVSGTRYIASWPLLQVMLRPGVVLGGPRGENILDGGAPFYNVYACADGR 251
Query: 231 FMAVGALESQFYAQLL--------AGLGMTEEELPQHEVETGRAK-------LTEKFKEK 275
+M+VG +E +F+ L A + P E++ + + + FK
Sbjct: 252 WMSVGCIEPRFFRVFLERFLQAIPADFALEGGWRPGPELQGVKGEWAMMKDFFAQGFKMH 311
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNV 307
+A W +IFD TDAC PVLSL +A + V
Sbjct: 312 PRAFWEKIFDGTDACALPVLSLKEAAALAARV 343
>gi|427823982|ref|ZP_18991044.1| CaiB/BaiF family protein [Bordetella bronchiseptica Bbr77]
gi|410589247|emb|CCN04314.1| CaiB/BaiF family protein [Bordetella bronchiseptica Bbr77]
Length = 391
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 203/341 (59%), Gaps = 12/341 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L G+ V+E AG+ P P M L + GATVIR+D+ GA VQ +G +KS+ +
Sbjct: 14 LAGVKVVEIAGIGPGPLAAMFLADLGATVIRVDRKQPSGLGAPRPVQFDLGLRNRKSIRV 73
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ L Q+D ++E FR GVME+L LGPD NPRL+Y R++G+GQ+GP
Sbjct: 74 DLKDPAAVEMVLALLEQADALIEGFRPGVMERLGLGPDACLARNPRLVYGRVTGWGQEGP 133
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 134 LARVAGHDLNYISITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARGSG 193
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A L + + + K RG NL+D GA Y+ YE DG++++V
Sbjct: 194 KGQVVDAAMVDGVASLMTVIMGMHGAGMHGKQRGTNLVDTGAPCYEVYECADGKYVSVAP 253
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E +FY LL L + + L Q +++ + L +F+E+T+ EW E+ +D C+
Sbjct: 254 IEDKFYRLLLEKLQLQDHPLLQEQMDRAAWPQAKQVLAARFRERTRDEWTELLGASDVCL 313
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
PVL +A +HPH RG+ + GVV PAP PR SRTP
Sbjct: 314 APVLDFDEALAHPHIRQRGTLT-DIDGVVHPAPGPRFSRTP 353
>gi|431927561|ref|YP_007240595.1| acyl-CoA transferase/carnitine dehydratase [Pseudomonas stutzeri
RCH2]
gi|431825848|gb|AGA86965.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
stutzeri RCH2]
Length = 360
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 202/342 (59%), Gaps = 5/342 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VLEFAG+ P P C M+L + GA V+RI++ G + V G+K+L ++++
Sbjct: 12 LCGLRVLEFAGIGPGPHCAMLLADMGAEVLRIEREGGNGWPNPVVDRGRKTLTLDIRSEA 71
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + LA +DV++E FR GVME+L LGP+ L + NP+LIY R++G+GQ GP + AG
Sbjct: 72 GRARCLELAQTADVLIEGFRPGVMERLGLGPEELLQRNPKLIYGRMTGWGQTGPLAKAAG 131
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ + + PP NL DFGGG L A+GI+ AL+ER +SG+GQVID
Sbjct: 132 HDINYIALTGALAAIRGESGTAIPPLNLVGDFGGGSLYLAVGILAALWERERSGQGQVID 191
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G + L ++ + D R N L G A Y Y DGR +A+G LE QF+
Sbjct: 192 AAIVDGVSSLMTFFAGLLPSGRIDMQRERNPLAGAAPNYRCYRCADGREIAIGPLEPQFW 251
Query: 243 AQLLAGLGMTEEELPQHEVETG---RAKLTEK-FKEKTQAEWCEIFDNTDACVTPVLSLS 298
+LL + E E G +A+L E+ F +TQAEWC + + +DAC PVL L
Sbjct: 252 RELLERIDAPEALWAGCEDPAGWPAQAELLERLFITRTQAEWCALLEGSDACFAPVLELG 311
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEH 340
+A HPH R S G+ APAPR SRTP ++ T
Sbjct: 312 EAPQHPHLRQR-SVYQELDGIAQAAPAPRFSRTPSKARQTSR 352
>gi|404213176|ref|YP_006667351.1| putative acyl-CoA transferases/carnitine dehydratase [Gordonia sp.
KTR9]
gi|403643975|gb|AFR47215.1| putative acyl-CoA transferases/carnitine dehydratase [Gordonia sp.
KTR9]
Length = 385
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 216/381 (56%), Gaps = 14/381 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L G ++E AG+ P PF M+L + GA VI +D+ G P+ G ++ + ++LK
Sbjct: 9 LAGTRIIELAGIGPGPFAAMMLADMGAEVITVDRPGGNPWAVGGHGILFRSRRHIAVDLK 68
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G V++ L +D ++E FR GV E+L +GP + NP L+Y R++G+GQ GP +
Sbjct: 69 TEAGADVVRRLCADADGLIETFRPGVAERLGVGPQDCQRVNPDLVYGRMTGWGQSGPMAQ 128
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+ GHDINY+ L+G L +G + P PP NL DFGGGG A G++ + G+
Sbjct: 129 LPGHDINYIALTGALHQIGRKGEPPVPPLNLVGDFGGGGTFLAFGMLAGILSARAGHGGR 188
Query: 180 VIDCNMVEGSAYLGSWL--TRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
V+D M++G++ L + R +D+F+ D RG NLLD GA FYD Y T+D +++++GA+
Sbjct: 189 VVDAAMIDGASALMAMFHSYRAEDSFVED--RGANLLDTGAFFYDVYRTRDDKWVSIGAI 246
Query: 238 ESQFYAQLLAGLGMTE----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E+QF+ +L LG+ E + L + R L ++ E +AE F + C P
Sbjct: 247 ENQFWLELCDVLGLPEAMRHDHLDPERWDDYRIVLQKRVAEYDRAELDSAFAGRNTCYAP 306
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLR 353
VL++S+A HPH+ R +F+ VV PAPAPR P T + APG TR+VL
Sbjct: 307 VLTMSEAIEHPHHQARNTFV-TVDDVVQPAPAPRFDGQPPT--VPRPRRAPGADTRDVLL 363
Query: 354 HFGYSDANIEELIREDVIEET 374
GYS+ IE L+ + V++ T
Sbjct: 364 AAGYSETRIESLLADGVVDST 384
>gi|302654855|ref|XP_003019226.1| CAIB/BAIF family enzyme [Trichophyton verrucosum HKI 0517]
gi|291182934|gb|EFE38581.1| CAIB/BAIF family enzyme [Trichophyton verrucosum HKI 0517]
Length = 372
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/298 (46%), Positives = 195/298 (65%), Gaps = 21/298 (7%)
Query: 23 ILNEFGATVIRIDK---------HGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQ 73
+L+++GA+V+RID+ P D + K S+ ++LK +V+ +L ++
Sbjct: 1 MLSDYGASVVRIDRPHPNAHSQSKPVPPPTFDALTRHKTSISLDLKNPASKAVLLSLLSK 60
Query: 74 SDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSG 132
+DV+++P+R GV+EKL L P VL K NPRLI AR++G+ +DG Y MAGHDINY+ +SG
Sbjct: 61 ADVLIDPYRPGVLEKLGLCPTTVLLKHNPRLIIARMTGFRRDGKYKDMAGHDINYIAVSG 120
Query: 133 ILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYL 192
LSLLG + P P N+ DF GGG +C G+++AL R +GRGQV++ NMV+GSAYL
Sbjct: 121 ALSLLGREGQKPYAPGNILGDFAGGGAVCFQGVLLALLARQTTGRGQVVNANMVDGSAYL 180
Query: 193 GSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQFYAQLLAGLGM 251
++ + T +WD PRG N+LDGG +YDTYETKD GR+ AVGALE QFY LL GLG+
Sbjct: 181 ATFPRLARQTPMWDGPRGSNVLDGGCPYYDTYETKDKGRYFAVGALEPQFYTALLDGLGL 240
Query: 252 TEEE-------LPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
EEE + + + E RA +F+EKT++EW IFD TDAC TP+L++ +
Sbjct: 241 REEEVFPLGSSMDRQDKENWPYMRAVFARRFREKTRSEWEAIFDGTDACATPLLTMDE 298
>gi|294632368|ref|ZP_06710928.1| fatty acid-CoA racemase [Streptomyces sp. e14]
gi|292835701|gb|EFF94050.1| fatty acid-CoA racemase [Streptomyces sp. e14]
Length = 397
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/318 (41%), Positives = 194/318 (61%), Gaps = 8/318 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G +D K+S+ ++L
Sbjct: 66 LTGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGAGLGIDPARDVTNRNKRSVVLDL 125
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + + +LA ++DV++E +R GV E+L +GP+ NPRL+Y R++G+GQDGP +
Sbjct: 126 KSPEGRAGVLDLAARADVLIEGYRPGVAERLGVGPEDCHARNPRLVYGRMTGWGQDGPLA 185
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ ++G L ++G +R P P NL D+ GG L +G++ AL SG G
Sbjct: 186 PRAGHDIAYIAVTGALGMIGAPDRPPAVPANLLGDYAGGSLYLVVGVLAALHHARASGAG 245
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+LG+ + W RG NLLDGG +Y TYET DG +MAVGALE
Sbjct: 246 QVVDAAIVDGAAHLGAMIHGMLAAGAWQDRRGVNLLDGGCPYYGTYETADGAYMAVGALE 305
Query: 239 SQFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FY + A LG+ + H + R + +FK +T+ EW +F+ +DACV PV
Sbjct: 306 RRFYDEFAALLGLPSDLAGAHADLARWDELREAVAARFKSRTRDEWTAVFEGSDACVAPV 365
Query: 295 LSLSQATSHPHNVHRGSF 312
LSL +A HPH RG+F
Sbjct: 366 LSLREAPHHPHLAARGTF 383
>gi|441184308|ref|ZP_20970422.1| fatty acid-CoA racemase, partial [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440614056|gb|ELQ77378.1| fatty acid-CoA racemase, partial [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 336
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 205/330 (62%), Gaps = 11/330 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 9 LSGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGSGLGIDPAYDITNRNKRSVLVDL 68
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A+G + +LA ++DV++E +R GV E+L +GPD + NPRL+Y R++G+GQ GP +
Sbjct: 69 KSAEGPGQVLDLAERADVLIEGYRPGVAERLGIGPDACLERNPRLVYGRMTGWGQQGPLA 128
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL-FERSKSGR 177
+ AGHDI Y+ ++G L + G + P P NL D+ GG L +G++ AL +++ GR
Sbjct: 129 ATAGHDIGYIAVTGALGMTGPPDGPPAAPANLLGDYAGGSLYLVVGVLAALRHAQTEDGR 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L S + W RG NLLDGGA FY TYET DGR MAVGAL
Sbjct: 189 GQVVDAAIVDGTAHLTSMIHGMLAAGGWQDRRGANLLDGGAPFYGTYETADGRHMAVGAL 248
Query: 238 ESQFYAQLLAGLGMTEEELPQHE----VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E +FYA+ + LG+ E+++P + E RA + +FK +T+ EW +F+ +DACV P
Sbjct: 249 EPRFYAEFVRLLGI-EDDVPARDDIGAWEELRAAIAARFKTRTRQEWTAVFEASDACVAP 307
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPA 323
VLSL +A HPH RG+F G+ PA
Sbjct: 308 VLSLREAPGHPHLAARGTFT-GHGGITQPA 336
>gi|73537711|ref|YP_298078.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
gi|72121048|gb|AAZ63234.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia
eutropha JMP134]
Length = 375
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 198/336 (58%), Gaps = 11/336 (3%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCINLK 59
+ ++E AG+ P P M+L + GATV+R+++ A +P + + ++++ ++LK
Sbjct: 1 MRIVELAGIGPGPMSAMLLADMGATVLRVERRDAADLGVKRPIQYNLLLRNRRAIALDLK 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ ++ +L +D ++E FR GV E+L LGPDV K NPRL+Y R++G+GQ GP +S
Sbjct: 61 DPAAVELVLDLVENADALIEGFRPGVTERLGLGPDVCLKRNPRLVYGRMTGWGQTGPLAS 120
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G L+ +G + P+ P L DFGGG + +G++ A+ E SG+GQ
Sbjct: 121 AAGHDINYISLTGTLNAIGRHGQPPSVPLALVGDFGGGAMFLVMGLLAAIIEARGSGKGQ 180
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+G+ L + + LW RG N+LD GA +YD Y KDG+++++G +E+
Sbjct: 181 VVDAAIVDGALALSTAIYGMHAGGLWHPERGSNVLDSGAPYYDVYACKDGKYISIGPIEA 240
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPVL 295
+FY+ LL L + EL + E F +T+ EWC + TD C PVL
Sbjct: 241 RFYSDLLQRLDLDAAELGNQNDTAAWPRAKEAFARAFLGRTRDEWCAELEGTDVCFAPVL 300
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
S +A HPH RGSF+ GV PAPAPR SRT
Sbjct: 301 SFDEAPQHPHMQARGSFV-EVDGVTQPAPAPRFSRT 335
>gi|146282282|ref|YP_001172435.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri A1501]
gi|145570487|gb|ABP79593.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri A1501]
Length = 360
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 202/346 (58%), Gaps = 17/346 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VLEFAG+ P P C M+L + GA V+RI++ G + V G+K+L ++++
Sbjct: 12 LCGLRVLEFAGIGPGPHCAMLLADMGAEVLRIEREGGNGWPNPVVDRGRKTLTLDIRSVA 71
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G LA +DV++E FR GVME+L LGPD L + NPRLIY R++G+GQ GP + AG
Sbjct: 72 GRERSLALAMDADVLIEGFRPGVMERLGLGPDELLERNPRLIYGRMTGWGQSGPLAKAAG 131
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ + + PP NL DFGGG L A+GI+ AL+ER +SG+GQVID
Sbjct: 132 HDINYIALTGALAAIRGDSGPAIPPLNLVGDFGGGSLYLAVGILAALWERERSGQGQVID 191
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G + L ++ + D R N L G A Y Y DGR +A+G LE QF+
Sbjct: 192 AAIVDGVSSLMTFFAGLLPSGRIDLQRDRNPLAGAAPNYRCYRCADGREIAIGPLEPQFW 251
Query: 243 AQLLAGLGMTE---------EELPQHEVETGRAKLTEK-FKEKTQAEWCEIFDNTDACVT 292
+LL + E E P +L E+ F +TQAEWC + + +DAC
Sbjct: 252 RELLVRMDAPEALWAGCVDPAEWPAQ------GELLERLFATRTQAEWCALLEGSDACFA 305
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
PVL L+ A HPH RG + G++ APAPR SRTPG ++ T
Sbjct: 306 PVLELADAPQHPHLRQRGVY-QELDGMMQAAPAPRFSRTPGKARRT 350
>gi|392594750|gb|EIW84074.1| CoA-transferase family III [Coniophora puteana RWD-64-598 SS2]
Length = 400
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 233/411 (56%), Gaps = 45/411 (10%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL G+ V+EFAGLAP PF G++L GA+V+RID+ G+ D + GKKS+ +N K
Sbjct: 1 MALSGLKVVEFAGLAPGPFAGLVLAHHGASVVRIDRPGS--VSSDNLCSGKKSIALNTKT 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS-------NPRLIYARLSGYGQ 113
GL++ K L +DV+++PFR GV+EK LGP+V N RLIYAR+SG+ +
Sbjct: 59 PAGLAIAKKLLADADVLIDPFRPGVLEKTGLGPEVFYDREDGKRGLNDRLIYARISGFPR 118
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
DGP+ SMAGHDINYL LSG+LS+L P P NL ADFGGGG+MCA+GI++AL RS
Sbjct: 119 DGPHKSMAGHDINYLALSGVLSILPGTKEKPAFPINLIADFGGGGMMCAMGILLALLSRS 178
Query: 174 KSGRGQVIDCNMVEGSAYLGSW-LTRTQDTFL--WDKPRGENLLDGGAHFYDTYETKDGR 230
K+GRGQV++ +MV G+ YL ++ L + DT + + RG NLLDGGA FYD Y DGR
Sbjct: 179 KTGRGQVVNADMVSGTRYLSTFPLLQANDTASPHFGRERGTNLLDGGAPFYDVYTCADGR 238
Query: 231 FMAVGALESQFYAQLLAGL--GMTEEE-------LPQHEVETG-----RAKLTEKFKEKT 276
+++VG LE QF+A + + + E P ++ R + + FK K
Sbjct: 239 WVSVGCLEPQFFATFVHKFNRALADAEGAGAWRPTPSTQLHRSLWPRLREYMEKGFKSKP 298
Query: 277 QAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP---G 333
+ W ++F +DACV PVL +A S + R S P P LSRTP
Sbjct: 299 RRFWEQVFHGSDACVLPVLEPEEAAS----LARSS---------RPLAHPNLSRTPSPYA 345
Query: 334 TSKITEHNP---APGVHTREVLRHFGYSDANIEELIREDVIEETIEMNSKL 381
T P PG HT E+LR G+S+ E ++KL
Sbjct: 346 TPSYESDKPEILEPGQHTDEILREVGFSEKERRRFACNGAFGEEAREDAKL 396
>gi|118397412|ref|XP_001031039.1| CAIB/BAIF family protein [Tetrahymena thermophila]
gi|89285360|gb|EAR83376.1| CAIB/BAIF family protein [Tetrahymena thermophila SB210]
Length = 365
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 224/376 (59%), Gaps = 33/376 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRID-KHGAQPFVQDT----VGYGKKSLCIN 57
LKGI VLEF GLAP F GMIL +FGA V I+ K P DT + GKKSL +
Sbjct: 5 LKGIKVLEFEGLAPTVFAGMILADFGADVTIINRKKNVNPIGIDTKNTYLNRGKKSLAAD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
K +SV++ + ++DV+++ FR G +E + LGP+ + N RLI+AR+SG+GQ GP
Sbjct: 65 FKDPFQVSVIRKMMEKTDVVIDCFRPGKLEHIGLGPNDI--KNDRLIFARVSGFGQTGPL 122
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
AGHDINYL SGIL NRNP PP N+ ADF GGG +GI++AL+ER ++G+
Sbjct: 123 RDYAGHDINYLSYSGILGTFSKENRNPEPPNNVLADFAGGGGFGVIGILLALYERERTGK 182
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D ++ + Y+ S+L + +W+ PRG+NLLDGGAH+Y TY+ KDG+++AVG +
Sbjct: 183 GQVVDVSLTDCVGYMSSFLHNMKKLGVWNNPRGKNLLDGGAHYYQTYKCKDGKYLAVGCI 242
Query: 238 ESQFYAQLLAGLGMTEEEL---PQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDAC 290
E+QFY L GL + +++ Q++V+ LT++F++ KT+ EW +IF+ D C
Sbjct: 243 ENQFYRNFLKGLNVEHQDVLAKNQYDVDE-YEHLTDEFQKIILNKTRDEWMQIFEPLDCC 301
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
V+PVL +++ F N + + A AP P+ G HT E
Sbjct: 302 VSPVLDMNEMYIMAEKYLTELFNIN---IASDASAP---------------PSRGQHTLE 343
Query: 351 VLRHFGYSDANIEELI 366
VL+ + S +I + I
Sbjct: 344 VLKQYNISQEDITKFI 359
>gi|432342966|ref|ZP_19592184.1| alpha-methylacyl-CoA racemase [Rhodococcus wratislaviensis IFP
2016]
gi|430771996|gb|ELB87806.1| alpha-methylacyl-CoA racemase [Rhodococcus wratislaviensis IFP
2016]
Length = 335
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/322 (46%), Positives = 210/322 (65%), Gaps = 14/322 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-------AQPFVQDTVGYGKKSLC 55
L G+TV+E A LAPAPF MIL + GA VIR+++ G A V D G++S+
Sbjct: 6 LSGLTVVELASLAPAPFGCMILADLGADVIRVERAGDGGSGLMAPSGVLDR---GRRSIA 62
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+NL+ +GL ++ L ++D+++E FR GV E+L +GPD NP LIY R++G+GQDG
Sbjct: 63 VNLRTPEGLEAVRTLVERADILVEGFRPGVAERLGIGPDDCLSRNPGLIYGRMTGWGQDG 122
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ L+G L +G P PP NL DFGGGGLM +GI+ AL ERS+S
Sbjct: 123 PLARRAGHDINYIALTGALEPIGRAGERPVPPLNLLGDFGGGGLMLTMGILAALHERSRS 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQV+D +MV+G+A L +++ LW + RG N+LDG A FYDTYE DG +AVG
Sbjct: 183 GRGQVVDASMVDGAALLTAFVHGMNAAGLWQEGRGRNVLDGAAAFYDTYECADGLHVAVG 242
Query: 236 ALESQFYAQLLAGLGMTEEELP-QHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E FY +LL LG++ E+LP Q++++ + +L E F + + EW +F ++DACV
Sbjct: 243 CVEPHFYGELLEVLGLSGEDLPLQYDLDAAPELKKRLAEVFATRPRDEWAALFTDSDACV 302
Query: 292 TPVLSLSQATSHPHNVHRGSFI 313
+PVLS +A HPHN R +F+
Sbjct: 303 SPVLSPWEAHEHPHNKERETFV 324
>gi|432343685|ref|ZP_19592831.1| fatty acid-CoA racemase [Rhodococcus wratislaviensis IFP 2016]
gi|430771287|gb|ELB87169.1| fatty acid-CoA racemase [Rhodococcus wratislaviensis IFP 2016]
Length = 355
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 202/335 (60%), Gaps = 12/335 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
+ G+ V+E A + P+ M+L + GA V+R+ + G P + + GK+ + ++LK
Sbjct: 1 MIGLRVVELANIGPSAHAAMVLADLGADVVRVQRPGLLPEDHTSAEHLHRGKRVVEVDLK 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
++G + + LA+ +DV++E FR GV+E+L LGP ++ + P L+YAR++G+GQDGP +
Sbjct: 61 DSRGAADVLALASGADVLVEGFRPGVVERLGLGPAIVLEHVPSLVYARVTGWGQDGPRAD 120
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDIN++ +GIL +G P PP N+ A F GG + GI+ AL+ER +SG GQ
Sbjct: 121 KAGHDINFIAPTGILHSIGRGEDRPVPPLNVVAGFAGGSMFMVTGILSALWERQRSGLGQ 180
Query: 180 VIDCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
V+D + EG+A L +W R Q W RG NL+DG F+DTYE DG +MAVGA
Sbjct: 181 VVDVSAAEGAAVLTQHAWSMRGQGR--WSDERGANLVDGSCPFWDTYECSDGHYMAVGAF 238
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFY +L+A LG+ LP + + R +F +++AEW F + DACVTP
Sbjct: 239 EPQFYDRLIAVLGLDPNTLPDRDDRSRWPELRVLFAARFTTRSRAEWAAAFADVDACVTP 298
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
V S ++A S PH RGSF+ GVV P PAPR
Sbjct: 299 VSSFAEAPSDPHFSTRGSFV-EIDGVVQPMPAPRF 332
>gi|386020556|ref|YP_005938580.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri DSM 4166]
gi|327480528|gb|AEA83838.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri DSM 4166]
Length = 360
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 200/346 (57%), Gaps = 17/346 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VLEFAG+ P P C M+L + GA V+RI++ G + V G+K+L ++++
Sbjct: 12 LCGLRVLEFAGIGPGPHCAMLLADMGAEVLRIEREGGNGWPNPVVDRGRKTLTLDIRSVA 71
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G LA +DV++E FR GVME+L LGPD L + NPRLIY R++G+GQ GP + AG
Sbjct: 72 GRERSLALAMDADVLIEGFRPGVMERLGLGPDELLERNPRLIYGRMTGWGQSGPLAKAAG 131
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ + + PP NL DFGGG L A+GI+ AL+ER +SG+GQVID
Sbjct: 132 HDINYIALTGALAAIRGDSGPAIPPLNLVGDFGGGSLYLAVGILAALWERERSGQGQVID 191
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G + L ++ + D R N L G A Y Y DGR +A+G LE QF+
Sbjct: 192 AAIVDGVSSLMTFFAGLLPSGRIDLQRDRNPLAGAAPNYRCYRCADGREIAIGPLEPQFW 251
Query: 243 AQLL----------AGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+LL AG E Q E+ L F +TQAEWC + + +DAC
Sbjct: 252 RELLERMDAPEALWAGCADPAEWPAQGEL------LERLFATRTQAEWCALLEGSDACFA 305
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
PVL L A HPH RG + G++ APAPR SRTPG ++ T
Sbjct: 306 PVLELVDAPQHPHLRQRGVY-QELDGMMQAAPAPRFSRTPGKARRT 350
>gi|339493890|ref|YP_004714183.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338801262|gb|AEJ05094.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 360
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 200/346 (57%), Gaps = 17/346 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VLEFAG+ P P C M+L + GA V+RI++ G + V G+K+L ++++
Sbjct: 12 LCGLRVLEFAGIGPGPHCAMLLADMGAEVLRIEREGGNGWPNPVVDRGRKTLTLDIRSVA 71
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G LA +DV++E FR GVME+L LGPD L + NPRLIY R++G+GQ GP + AG
Sbjct: 72 GRERCLALAVDADVLIEGFRPGVMERLGLGPDELLERNPRLIYGRMTGWGQSGPLAKAAG 131
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ + + PP NL DFGGG L A+GI+ AL+ER +SG+GQVID
Sbjct: 132 HDINYIALTGALAAIRGDSGPAIPPLNLVGDFGGGSLYLAVGILAALWERERSGQGQVID 191
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G + L ++ + D R N L G A Y Y DGR +A+G LE QF+
Sbjct: 192 AAIVDGVSSLMTFFAGLLPSGRIDLQRDRNPLAGAAPNYRCYRCADGREIAIGPLEPQFW 251
Query: 243 AQLL----------AGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+LL AG E Q E+ L F +TQAEWC + + +DAC
Sbjct: 252 RELLERMDAPEALWAGCADPAEWPAQGEL------LERLFATRTQAEWCALLEGSDACFA 305
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
PVL L A HPH RG + G++ APAPR SRTPG ++ T
Sbjct: 306 PVLELVDAPQHPHLRQRGVY-QELDGMMQAAPAPRFSRTPGKARRT 350
>gi|78063492|ref|YP_373400.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
gi|77971377|gb|ABB12756.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. 383]
Length = 388
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 204/340 (60%), Gaps = 12/340 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-----GAQPFVQDTVGY-GKKSLCI 56
L GI ++E AG+ P P M L + GATVIR+D+ GA VQ +G +KS+ +
Sbjct: 11 LAGIKIVEIAGIGPGPLAAMFLADLGATVIRVDRKEPSGIGAPRPVQFDLGLRNRKSIRV 70
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ +L +D ++E FR GVME+L LGP+ NPRL+Y R++G+GQDGP
Sbjct: 71 DLKDPAAVDMVLDLIANADALIEGFRPGVMERLGLGPEPCLARNPRLVYGRVTGWGQDGP 130
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
S +AGHD+NY+ ++G L +G + PTPP N+ D+ GG L A G++ + E SG
Sbjct: 131 LSQVAGHDLNYISITGALHAMGRAGQAPTPPLNVLGDYAGGSLYLAFGLLAGILEARGSG 190
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G A + + + + D RG NL+D GAH Y+ Y DG++++VG
Sbjct: 191 QGQVVDAAMVDGVASIMTVMMGLHAAGMLDNARGTNLVDTGAHCYEVYACADGKYVSVGP 250
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+ES+FY LL L + + L Q +++ + L EKF+E+T+ EW + + D CV
Sbjct: 251 IESKFYRLLLEQLDLQDHPLLQAQMDRTQWPQAKQVLAEKFRERTRDEWTQRLGHLDVCV 310
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL +A SHPH RG F+ + GV PAP PR SRT
Sbjct: 311 APVLDFDEAPSHPHAQARGMFV-DLDGVTHPAPGPRFSRT 349
>gi|440700704|ref|ZP_20882940.1| CoA-transferase family III protein [Streptomyces turgidiscabies
Car8]
gi|440276678|gb|ELP64907.1| CoA-transferase family III protein [Streptomyces turgidiscabies
Car8]
Length = 385
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 202/336 (60%), Gaps = 11/336 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA--QPFV---QDTVGYGKKSLCIN 57
L G V+E G+ P PF GM+L + GA V+R+D+ G +P D + GK+S+ ++
Sbjct: 8 LVGCRVVELGGIGPGPFAGMLLADLGAEVVRVDRPGRADEPDAGGPADVLNRGKRSVVLD 67
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G + + L +DV++E FR GV E+L +GP N RL+Y R++G+GQDGP
Sbjct: 68 LKHPAGAAALLQLVEHADVLIEGFRPGVTERLGIGPHDCLARNARLVYGRMTGWGQDGPL 127
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
++ AGHDI Y+ L+G L +G P P NL DFGGGG +G++ AL +++GR
Sbjct: 128 AAAAGHDITYIALAGALGAIGEAGGPPRIPLNLVGDFGGGGCYLVIGVLAALHAAARTGR 187
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L + W RG N DGG FY YET+DGR MAVGAL
Sbjct: 188 GQVVDAAIVDGTAHLLASTFGKLGRGEWSDERGVNRFDGGWPFYAVYETRDGRHMAVGAL 247
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E +FY +L+ L + + QH+ T R L ++F E+T+ EW +F+ TDACV PV
Sbjct: 248 ERKFYRRLIDLLDLDVDPEWQHDRSTWPQLRQLLEKRFAERTRDEWAALFEGTDACVAPV 307
Query: 295 LSLSQATSHPHNVHRGSFI-PNRAGVVAPAPAPRLS 329
LSLS+A +HPH R + P+ GVV PA APR S
Sbjct: 308 LSLSEAAAHPHLAARATLTAPD--GVVQPAAAPRFS 341
>gi|389875771|ref|YP_006373506.1| L-carnitine dehydratase/bile acid-inducible protein F [Tistrella
mobilis KA081020-065]
gi|388530726|gb|AFK55922.1| L-carnitine dehydratase/bile acid-inducible protein F [Tistrella
mobilis KA081020-065]
Length = 355
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 190/331 (57%), Gaps = 5/331 (1%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLS 65
+ V+EFAG+ PAPF M+L + GA V+RI + G D + GK + ++LK
Sbjct: 1 MRVVEFAGIGPAPFAAMVLADLGAEVVRIGRPGEPARPHDFMSRGKGLMTLDLKDPADRE 60
Query: 66 VMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDI 125
+ LA ++V++E R GVME+L LGPD L PRL+Y R++G+GQ GP +S AGHDI
Sbjct: 61 TARALALTAEVLIEGNRPGVMERLGLGPDDLLAKAPRLVYGRMTGWGQAGPLASTAGHDI 120
Query: 126 NYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNM 185
NY+ ++G+L LG R P P NL D GGG + GI+ ALF+ +SGRGQV+D +
Sbjct: 121 NYVAVTGMLDALGAEGRKPAIPLNLIGDLGGGAMFLVAGILAALFDAMRSGRGQVVDAAI 180
Query: 186 VEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQL 245
V+G + W G NLLDGGA FYDTY DG+++A+G LE QFYA+L
Sbjct: 181 VDGVNLFAGVFHMLRAQGRWPGRPGTNLLDGGAPFYDTYRCADGKYVAIGPLEPQFYAEL 240
Query: 246 LAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPVLSLSQAT 301
L L + + Q + T +L F + + WC + + +DAC PVL L +
Sbjct: 241 LRRLDVCDPRAFQRDDRTSWPELKTMFARLFATRDRDAWCALLEGSDACFAPVLELDEVP 300
Query: 302 SHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
HPH+ R +F GV+ PAPAPR S TP
Sbjct: 301 DHPHHQAREAFH-QTDGVLHPAPAPRFSATP 330
>gi|403728743|ref|ZP_10948235.1| putative fatty acid-CoA racemase [Gordonia rhizosphera NBRC 16068]
gi|403203324|dbj|GAB92566.1| putative fatty acid-CoA racemase [Gordonia rhizosphera NBRC 16068]
Length = 378
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 197/345 (57%), Gaps = 16/345 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQ--------DTVGYGK 51
L G+ VL AG+ P P+ M+L + GA V+R+ + A+ Q D V
Sbjct: 5 LHGVRVLVLAGMGPVPYVSMLLADMGAHVVRVIRPPHRSARALSQTDALRDDADPVNRHV 64
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
S+ ++LK G+ + +LA +DV +E +R GV+E+L LGP+VL K N RLIY R++GY
Sbjct: 65 DSIAVDLKDPAGVEQVIDLARAADVFIEGYRPGVVERLGLGPEVLRKQNSRLIYVRMTGY 124
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQ GP + AGHDINY+ +G L + P PP NL D+ GGG+ A GI AL E
Sbjct: 125 GQTGPLAHDAGHDINYVAQTGALHAMARHGEAPRPPINLLGDYAGGGMTAAYGIACALVE 184
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
SG GQVID M++G A L + L + L+ G N LD GA FYDTY DG +
Sbjct: 185 ARTSGEGQVIDAAMIDGVALLTAKLQGLRAAGLYSDDPGTNFLDSGAPFYDTYRCADGGY 244
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNT 287
+AVGALE FY + ++ LG+ + P+ G R + + K++ + EW I++ T
Sbjct: 245 IAVGALEPDFYREFISRLGVDTSDWPEQNDRRGWNRLREVIADSVKQRPRDEWARIYEGT 304
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
D+CVTPVL+ +A PHN+ R + GV+ APAPRLSRTP
Sbjct: 305 DSCVTPVLTFDEAAVSPHNLARNMY-GTVDGVLHSAPAPRLSRTP 348
>gi|377568329|ref|ZP_09797520.1| putative fatty acid-CoA racemase [Gordonia terrae NBRC 100016]
gi|377534444|dbj|GAB42685.1| putative fatty acid-CoA racemase [Gordonia terrae NBRC 100016]
Length = 386
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 212/379 (55%), Gaps = 10/379 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L G ++E AG+ P PF M+L + GA VI +D+ G P+ G ++ + +NLK
Sbjct: 10 LAGTRIIELAGIGPGPFAAMMLADMGAEVITVDRPGGNPWAVGGHGILFRSRRHVAVNLK 69
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
G +V++ L +D ++E FR GV E+L +GP NP L+Y R++G+GQ GP +S
Sbjct: 70 SEAGAAVVRRLCADADGLIETFRPGVAERLGVGPADCRHHNPNLVYGRMTGWGQTGPMAS 129
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+ GHDINY+ L+G L +G + P PP NL DFGGGG A G++ + G+
Sbjct: 130 LPGHDINYIALTGALHQIGRKGGPPVPPLNLVGDFGGGGTFLAFGMLAGILSARAGHGGR 189
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M++G++ L + + + + RG NLLD GA FYD YET+DG+++++GA+E+
Sbjct: 190 VVDAAMIDGASALMAMFHSYRAEGDFVEERGANLLDTGAFFYDVYETRDGQWVSIGAIEN 249
Query: 240 QFYAQLLAGL----GMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+ +L L M + L + R L ++ E +AE +FD + C PVL
Sbjct: 250 QFWTELCDVLELPDAMRHDHLDPKRWDEYRIILEKRVAEYDRAELDALFDGRNTCYAPVL 309
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+S+A HPHN R +F+ VV PAPAPR P T+ APG T EVL
Sbjct: 310 RMSEAVEHPHNRARNTFV-TVDDVVQPAPAPRFDGHPPTAPRPRR--APGADTVEVLGET 366
Query: 356 GYSDANIEELIREDVIEET 374
G+S IE L+ + VI+ T
Sbjct: 367 GFSPTEIEALLADGVIDST 385
>gi|444431641|ref|ZP_21226805.1| putative fatty acid-CoA racemase [Gordonia soli NBRC 108243]
gi|443887481|dbj|GAC68526.1| putative fatty acid-CoA racemase [Gordonia soli NBRC 108243]
Length = 384
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 213/379 (56%), Gaps = 16/379 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYG-----KKSLCIN 57
L G+ ++E AG+ P PF M+L + GA VI +D+ G P+ G+G ++ L ++
Sbjct: 9 LAGLRIVELAGIGPGPFAAMMLADMGAEVISVDRPGGNPWA--VAGHGIMFRSRRHLAVD 66
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G V++ L +D ++E FR GV E+L +GP NP L+Y R++G+GQ GP
Sbjct: 67 LKAHGGAEVIRRLCADADGVIETFRPGVAERLGVGPQDCLARNPDLVYGRMTGWGQSGPM 126
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+++ GHDINY+ LSG L +G + P PP NL DFGGGG++ A G+V + G
Sbjct: 127 AALPGHDINYIALSGALHAIGRAGQAPVPPLNLVGDFGGGGMLLAFGMVSGILAARSGGG 186
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
G+V+D M++G + L + + + + RG +LL GA FYDTY T+D +++++GA+
Sbjct: 187 GRVVDAAMIDGVSALMAMFHSYRAEGAFSEERGTHLLGTGAWFYDTYRTRDDQWVSIGAI 246
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QF A+L L + +EL ++ +T R L + + E +F + C
Sbjct: 247 EPQFLAELCDVLQLP-DELRDNQFDTALWDDFREVLASRIAAFDRDELDRMFAGRNTCYA 305
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVL LS +HPH+V RG+F+ G+ PAPAPR P TS APG +R VL
Sbjct: 306 PVLPLSDVVTHPHHVERGTFV-EVDGIPQPAPAPRFHGAPPTSPTARR--APGADSRAVL 362
Query: 353 RHFGYSDANIEELIREDVI 371
G+SD I EL+ E V+
Sbjct: 363 AAAGFSDEEIAELVTEGVV 381
>gi|121607432|ref|YP_995239.1| L-carnitine dehydratase/bile acid-inducible protein F
[Verminephrobacter eiseniae EF01-2]
gi|121552072|gb|ABM56221.1| L-carnitine dehydratase/bile acid-inducible protein F
[Verminephrobacter eiseniae EF01-2]
Length = 384
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 208/334 (62%), Gaps = 5/334 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ ++E AGL P PFC M+ + GA VI ID+ G + G GK+ L ++L+++
Sbjct: 23 LTGLRMVEMAGLGPGPFCAMLFADLGADVIAIDRPGVEGDHSGVTGRGKRRLSLDLRQSG 82
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ L Q+D ++E FR GVME+L LGP NPRL+Y R++G+GQ GP SS AG
Sbjct: 83 PRAAALALIAQADWLVEGFRPGVMERLGLGPAECQALNPRLVYGRITGWGQSGPLSSAAG 142
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ LSG L +G P PP N D+GGG ++ A+G++ AL E +SG+GQVID
Sbjct: 143 HDINYIALSGALHAIGRPGAAPPPPLNYIGDYGGGAMLLAVGLLAALHEARQSGQGQVID 202
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A L S W RG NLLDGGAHFYD+Y DG+F+A+GA+E +F+
Sbjct: 203 AAMTDGAALLSSLFYGLHAADSWSGGRGGNLLDGGAHFYDSYICADGKFVAIGAIEPKFF 262
Query: 243 AQLLAGLGMTE----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+L A G+ E +++ + + + + +L + F+ +T+ EWC + + +DAC PVL
Sbjct: 263 RRLCALCGLDESFAAQQMERAQWPSMKLRLADVFRTRTRDEWCALLEGSDACFAPVLDWD 322
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+A +HPHN RGSF+ VV PAPAPR SRTP
Sbjct: 323 EAPAHPHNRARGSFV-TLGAVVQPAPAPRFSRTP 355
>gi|118463815|ref|YP_881843.1| fatty acid-CoA racemase [Mycobacterium avium 104]
gi|379746198|ref|YP_005337019.1| fatty acid-CoA racemase [Mycobacterium intracellulare ATCC 13950]
gi|379753445|ref|YP_005342117.1| fatty acid-CoA racemase [Mycobacterium intracellulare MOTT-02]
gi|118165102|gb|ABK65999.1| fatty acid-CoA racemase [Mycobacterium avium 104]
gi|378798562|gb|AFC42698.1| fatty acid-CoA racemase [Mycobacterium intracellulare ATCC 13950]
gi|378803661|gb|AFC47796.1| fatty acid-CoA racemase [Mycobacterium intracellulare MOTT-02]
Length = 326
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 196/315 (62%), Gaps = 7/315 (2%)
Query: 22 MILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPF 81
M+L + GA V R+ + G G++ + +LK A L+ +++L + +DV++E F
Sbjct: 1 MLLADLGAEVTRVQRPGGGGGGAQL--RGRRIVFADLKDAAELNGVRHLIDDADVLIEGF 58
Query: 82 RKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRN 141
R GV+E+L LGPD C+ NPRL+Y R++G+GQ GP + AGHDINY+GL+G+L +G +
Sbjct: 59 RPGVVERLGLGPDECCRRNPRLVYTRITGWGQTGPRARQAGHDINYVGLTGLLHAMGDPD 118
Query: 142 RNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQD 201
R P PP NL D+GGG L +G++ AL ER SGRGQVID +V G+ LG L
Sbjct: 119 RPPAPPLNLVGDYGGGSLFAVVGVLAALLERHASGRGQVIDAAIVNGAPMLGHILWAMLG 178
Query: 202 TFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL-PQHE 260
W RG+N+ DG A FY TYE DG ++AVGALE F+A+LL L + + L PQ E
Sbjct: 179 DGRWSDGRGDNIFDGSAPFYRTYECADGGYVAVGALEPAFFAELLRLLEIDPDTLGPQRE 238
Query: 261 VE---TGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRA 317
R L++KF+E+T+ W +F ++DACVTPVL+ ++A PH R F+ +
Sbjct: 239 RAGWPAMRDALSDKFREETRDHWARVFSDSDACVTPVLTATEAIDDPHMRARNVFV-DID 297
Query: 318 GVVAPAPAPRLSRTP 332
G+ PA APR SRTP
Sbjct: 298 GIRQPASAPRFSRTP 312
>gi|302506208|ref|XP_003015061.1| CAIB/BAIF family enzyme [Arthroderma benhamiae CBS 112371]
gi|291178632|gb|EFE34421.1| CAIB/BAIF family enzyme [Arthroderma benhamiae CBS 112371]
Length = 372
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/298 (46%), Positives = 195/298 (65%), Gaps = 21/298 (7%)
Query: 23 ILNEFGATVIRIDK---------HGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQ 73
+L+++GA+V+RID+ P D + K S+ ++LK +V+ +L ++
Sbjct: 1 MLSDYGASVVRIDRPHPNAHSQSKPVPPPTFDALTRHKTSISLDLKNPASKAVLLSLLSK 60
Query: 74 SDVILEPFRKGVMEKLQLGPD-VLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSG 132
+DV+++P+R GV+EKL L P VL K NPRLI AR++G+ +DG Y MAGHDINY+ +SG
Sbjct: 61 ADVLIDPYRPGVLEKLGLCPTTVLLKHNPRLIIARMTGFRRDGKYKDMAGHDINYIAVSG 120
Query: 133 ILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYL 192
LSLLG + P P N+ DF GGG +C G+++AL R +GRGQV++ NMV+GSAYL
Sbjct: 121 ALSLLGREGQKPYAPGNILGDFAGGGAVCFQGVLLALLARQTTGRGQVVNANMVDGSAYL 180
Query: 193 GSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQFYAQLLAGLGM 251
++ + T +W+ PRG N+LDGG +YDTYETKD GR+ AVGALE QFY LL GLG+
Sbjct: 181 ATFPRLARQTPMWNGPRGCNVLDGGCPYYDTYETKDKGRYFAVGALEPQFYTALLDGLGL 240
Query: 252 TEEE-------LPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
EEE + + + E RA +F+EKT++EW IFD TDAC TPVL++ +
Sbjct: 241 REEEVFPLGSSMDRQDKENWPYMRAVFARRFREKTRSEWEAIFDGTDACATPVLTMDE 298
>gi|302416545|ref|XP_003006104.1| alpha-methylacyl-CoA racemase [Verticillium albo-atrum VaMs.102]
gi|261355520|gb|EEY17948.1| alpha-methylacyl-CoA racemase [Verticillium albo-atrum VaMs.102]
Length = 378
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 191/313 (61%), Gaps = 34/313 (10%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ------PF-VQDTVGYGKKSLC 55
L G+ VLEFAGLAP PF GM+L + GA+V+RID+ Q P +D + K S+
Sbjct: 7 LTGLKVLEFAGLAPGPFAGMLLADAGASVLRIDRAVPQADGKGKPLPTEDMLARHKASIA 66
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G++++K LA +D++++PFR GV+EKL LGPDVLC NPRLIY R++G+ +DG
Sbjct: 67 VDLKDPAGVALVKTLAASADMLIDPFRPGVLEKLGLGPDVLCALNPRLIYGRMTGFRRDG 126
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
Y++MAGHDINYL +SG L +LG P PP N+ ADF GGG G+++A+ R +
Sbjct: 127 KYAAMAGHDINYLAVSGALGVLGRDGEKPHPPWNILADFAGGGATLFQGLLLAVVARHAT 186
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQ T L RG NLLDGG +YDTYET DGR+M+VG
Sbjct: 187 GRGQ----------------------TPLGSNGRGRNLLDGGCPYYDTYETSDGRYMSVG 224
Query: 236 ALESQFYAQLLAGLGMTEE--ELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDAC 290
ALE QFY L+ GLG+ + E + + + RA TE F K++ EW IFD TDAC
Sbjct: 225 ALEPQFYKALIRGLGLEGQGWEAKRQDPQVWPAMRALFTEVFLSKSRTEWEAIFDGTDAC 284
Query: 291 VTPVLSLSQATSH 303
TPVL + S
Sbjct: 285 CTPVLEYPELESE 297
>gi|452953787|gb|EME59200.1| L-carnitine dehydratase/bile acid-inducible protein F [Rhodococcus
ruber BKS 20-38]
Length = 365
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 204/337 (60%), Gaps = 8/337 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP--FVQDTVGYGKKSLCINLKK 60
L G+ V+E GL PA + L++ GA V+R+D+ G F ++ + G+ L I+LK+
Sbjct: 10 LSGVRVVELGGLGPAAWTCTFLSDMGAEVLRVDQPGRTDLDFTENWM-RGRARLEIDLKE 68
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ G +K+L ++DVI++PFR GV E+L LGPD L N RLIY RL+G+GQDGPY+ +
Sbjct: 69 SAGRERIKDLVARADVIIDPFRPGVAERLGLGPDELTADNGRLIYGRLTGWGQDGPYARV 128
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHD N++ +G+LS +G +R P P A D+ G + G++ AL+ER +SGRGQV
Sbjct: 129 AGHDGNFIATAGVLSTIGPADRPPIAPLYYAGDWASGTMPLLAGVLAALYERERSGRGQV 188
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID MV+G+A + + +D W R N LDG F+ TY T D R+M V A+E +
Sbjct: 189 IDAAMVDGAAMMLMQVLALRDRGAWTDARQSNQLDGAPWFHHTYRTLDDRYMIVAAIEHK 248
Query: 241 FYAQLLAGLGMTEE---ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
F ++ LG++E+ + P V G+ ++ E F +TQAEW EIF DACV+PV L
Sbjct: 249 FRRRVRETLGLSEKVALDEPDRWVADGQ-RVAEVFATRTQAEWEEIFAGVDACVSPVREL 307
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGT 334
S S PH + RG + G + PAP PR SRTP +
Sbjct: 308 SDLESEPHLLARGVY-QRIDGKLHPAPTPRFSRTPSS 343
>gi|453382594|dbj|GAC82889.1| alpha-methylacyl-CoA racemase [Gordonia paraffinivorans NBRC
108238]
Length = 369
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 209/365 (57%), Gaps = 21/365 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG-------YGKKSLC 55
L G+ V+E GL P P M+L + GA V RI + GA+P D + ++S+
Sbjct: 5 LTGVRVVEMPGLGPTPHAAMLLADLGADVTRIRRPGAEPSGPDGIAGADAALYRSRRSVE 64
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+LK + +S ++ L ++D+++E FR GVME+L LGP++ C PRLIYAR++G+GQ+G
Sbjct: 65 ADLKDPEDVSRVRELITRADIVIEGFRPGVMERLGLGPEI-CDVAPRLIYARMTGWGQEG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
+ AGHDINYL ++G+L +G P PP +L DFGGG ++ +G++ AL +R ++
Sbjct: 124 DRARTAGHDINYLAVTGVLEAMGPIGSPPVPPLSLVGDFGGGSMLLVVGVLAALHDRERT 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQV+D MV+G L + W NLLDG A FY TY DGRF+AVG
Sbjct: 184 GRGQVVDAAMVDGVGLLAQLQWSWKAAGRWVSRERGNLLDGTAPFYRTYRCADGRFVAVG 243
Query: 236 ALESQFYAQLLAGLGMTEEELPQ-----HEVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
ALE F+ L+ LG+ +LP H G A L+ +F +T+ +W FD DAC
Sbjct: 244 ALEETFWRNLIGVLGLA--DLPDRWDRAHWPVIGEA-LSARFAGRTRDDWVTAFDGVDAC 300
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
+TPVL L +A + V RGS + G+V APAPR SRTP + PA V E
Sbjct: 301 LTPVLDLDEAVADHDAVRRGSHV-EVDGMVQAAPAPRFSRTP----LPVPAPASAVDLTE 355
Query: 351 VLRHF 355
VL +
Sbjct: 356 VLSEW 360
>gi|393231513|gb|EJD39105.1| CoA-transferase family III [Auricularia delicata TFB-10046 SS5]
Length = 391
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 226/400 (56%), Gaps = 35/400 (8%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLK 59
MAL+GI V+E AGLAP PF GM+L + GA+V+RID+ D + GK+SL ++L+
Sbjct: 1 MALEGIKVIELAGLAPVPFAGMMLADMGASVVRIDRPSPVSVPAGDMLARGKRSLSLDLR 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS---NPRLIYARLSGY----- 111
+GL+V K L Q+DV+L+P+R GV+EK+ LGPDV N RL+YAR+SGY
Sbjct: 61 APRGLAVAKQLIAQADVLLDPYRPGVLEKMGLGPDVFLGDQGLNRRLVYARISGYVCVIR 120
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLL-GWRNRNPTPPCNLAADFGGGGLMCALGIVMALF 170
G P S GHD+NYL +G+L LL + P+ P NL ADF GGG +CA G++ AL
Sbjct: 121 GSSTPNRS-EGHDLNYLAATGVLHLLPRLSDGTPSFPVNLLADFAGGGHLCATGVLAALL 179
Query: 171 ERSKSGRGQVIDCNMVEGSAYLGSW-LTRTQD----TFLWDKPRGENLLDGGAHFYDTYE 225
ER+++G GQV+ +MV G+ Y+ S+ L QD F + G LL GGA FY YE
Sbjct: 180 ERARTGNGQVVATDMVSGARYVSSFVLAHAQDPYSSLFASEHNTGPALLGGGAPFYSVYE 239
Query: 226 TKDGRFMAVGALESQFYAQLLAGL-----GMTEE--ELPQHEVETGRAKLTEKFKEKTQA 278
KDG F++V LE +F+A L G +E ++ E R L + FK +T+
Sbjct: 240 CKDGGFVSVACLEPRFFAAFLRTFKEHCPGDFDEASQMDLERWEELRRYLRDGFKSRTRD 299
Query: 279 EWCEIFDN-TDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKI 337
EW F++ DACV PVL+ S+A + + AP PRL+ TP T+
Sbjct: 300 EWARTFEHEKDACVFPVLTPSEAAQRSGDAKSQTV----------APHPRLTGTP-TALP 348
Query: 338 TEHNPAPGVHTREVLRHFGYSDANIEELIREDVIEETIEM 377
PG+H+REVL FG+ I EL V+ E E+
Sbjct: 349 AFATLTPGLHSREVLSEFGFDSTRIAELFAAGVVAEHSEV 388
>gi|170735335|ref|YP_001774449.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia MC0-3]
gi|169821373|gb|ACA95954.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia MC0-3]
Length = 380
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 204/339 (60%), Gaps = 11/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L GI ++E AG+ P P M+L + GATV+RI++ +P + + +K++ +
Sbjct: 4 LHGIRIVELAGIGPGPMAAMLLADLGATVLRIERRQPVKLGIERPLRFNLLLRNRKTIAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + + ++ +L ++D ++E FR GV E+L LGP + + NP+L Y R++G+GQDGP
Sbjct: 64 DLKDPEAVELVLSLVERADALIEGFRPGVTERLGLGPQICLERNPKLAYGRITGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ ++G+L+ +G R++ P+ P NL D+ GG L A+G++ A+ G
Sbjct: 124 LAQYAGHDLNYIAITGVLNAIGRRDQPPSIPLNLIGDYAGGSLYLAMGLLSAIIHARNGG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+G+A L + Q +W RG N+ D G+HFYD YE DG+++ VG
Sbjct: 184 TGQVVDAAIVDGTANLATTFFGMQAAGIWRDGRGTNITDSGSHFYDAYECADGKWITVGP 243
Query: 237 LESQFYAQLLAGLGMTEE----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +FY +LL L + +L + RA KFK +T+ +W + +++DAC
Sbjct: 244 IEDKFYLELLRLLDIDPRTLGVQLDEKNWAAARALFALKFKSRTRDQWTTLLEHSDACFA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVLS ++A H H RG+FI G+V PAPAPR S T
Sbjct: 304 PVLSWTEAPEHAHLKARGTFI-EVDGIVQPAPAPRFSAT 341
>gi|325672908|ref|ZP_08152602.1| fatty acid-CoA racemase [Rhodococcus equi ATCC 33707]
gi|325556161|gb|EGD25829.1| fatty acid-CoA racemase [Rhodococcus equi ATCC 33707]
Length = 390
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 201/343 (58%), Gaps = 11/343 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L G+ V+E + P G++L + GA ++R+ + ++ G+ +
Sbjct: 16 LAGVRVVEMEAIGPLLHAGLMLADLGADIVRVVRPSSKASDDGIDDADAGMLRGRTVVTA 75
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+L +G +++L +DV++E R G MEKL LGPDV + NP L+Y R++G+GQ+GP
Sbjct: 76 DLTSDRGRRRVRSLIGSADVLMEGSRPGTMEKLGLGPDVCLQDNPGLVYGRMTGWGQEGP 135
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NYL LSG L LG P+PP N A+FGGG + +GI+ AL+ER+++G
Sbjct: 136 LAREAGHDVNYLALSGALEPLGPATGPPSPPLNYVANFGGGSMFLLVGILAALWERTRTG 195
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D M++G++ + + + Q W RG NLLDG A FY YE D FMAVGA
Sbjct: 196 RGQVVDAAMIDGASSVTALVRSWQHAGRWSADRGTNLLDGSAPFYRAYECADHGFMAVGA 255
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFK----EKTQAEWCEIFDNTDACVT 292
LE +Y + + GLG+ LP + +L E+F + +++W +F+ +ACVT
Sbjct: 256 LEDVYYDRFVRGLGLDPAALPDRWDRSNWNELAERFDGIFASRARSDWTAVFEGANACVT 315
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
PVLSL +AT H H HR +F + AG + PAPAPRL T G +
Sbjct: 316 PVLSLQEATLHSHATHRAAFT-DTAGFMMPAPAPRLGSTRGAA 357
>gi|288917574|ref|ZP_06411938.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EUN1f]
gi|288350967|gb|EFC85180.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EUN1f]
Length = 370
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 202/341 (59%), Gaps = 12/341 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E AG+ P P MIL + GA V+R+ + D + G++ L ++L+ +
Sbjct: 5 LSGLRVVELAGIGPGPHAAMILADLGADVVRVQRPNLGDGPDDWLLRGRRLLRVDLRSPE 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
GL+ L ++DV++E +R GV E+L LGP+ NPRL+YAR++G+GQ GP + AG
Sbjct: 65 GLAQTTELIARADVLIEGYRPGVAERLGLGPEQCLARNPRLVYARMTGWGQTGPLAHRAG 124
Query: 123 HDINYLGLSGILSLLGWR-NRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
HDINY+ L+G L +G + P PP NL D+GGG + +GI+ AL ER +SG+GQV+
Sbjct: 125 HDINYISLTGALHAMGSNADERPAPPLNLVGDYGGGSMFLLVGILSALLERGRSGQGQVV 184
Query: 182 DCNMVEGSAYLGS--WLTRTQDTFL----WDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
D +V+G++ L W R + W R NLLDG FYDTY DG +AVG
Sbjct: 185 DAAIVDGTSVLLQMMWAWRAMGDWHGYGDWSDERASNLLDGSRPFYDTYTCSDGGHVAVG 244
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA+LL GL + +LP G R T F +T+ EW FD TDACV
Sbjct: 245 PLEPQFYAELLKGLDLDAAQLPDQNDPAGWPVLREAFTTAFAARTRDEWAARFDGTDACV 304
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
TPVLSL++ ++ PH RG+ + + GV APAPR SR+P
Sbjct: 305 TPVLSLAEVSADPHMSARGAVV-DVDGVPQAAPAPRFSRSP 344
>gi|409042075|gb|EKM51559.1| hypothetical protein PHACADRAFT_150032 [Phanerochaete carnosa
HHB-10118-sp]
Length = 452
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 232/442 (52%), Gaps = 81/442 (18%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL GI V+EFAGLAP PF G+IL ++GA VIR+D+ G+ DT+ K+S+ +++K
Sbjct: 15 MALAGIRVIEFAGLAPGPFAGLILADWGADVIRLDRLGSS--STDTLTRNKRSIALDVKS 72
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS-------NPRLIYARLSGYGQ 113
GL++ + L +DV+++PFR GVME++ LGP++ N RL++ARL+G+
Sbjct: 73 PAGLAIARRLVASADVLIDPFRPGVMERMGLGPELFLGGQDDGDGLNRRLVFARLAGFSL 132
Query: 114 DGPYSSMA-GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER 172
GPY MA GHDINYL LSG+LS+ P+ P NL ADFGGGG+ CALGI++AL ER
Sbjct: 133 AGPYKDMAAGHDINYLALSGVLSMFPGTPDKPSFPLNLLADFGGGGMTCALGILLALIER 192
Query: 173 SKSGRGQVIDCNMVEGSAYLGSWLTRTQ--------------DTFLWDKP--------RG 210
S+SG GQV+ +MV G+ YL ++ + F +P R
Sbjct: 193 SRSGLGQVVSTDMVSGTRYLSTFPLASAMRPPSNGPPNLSSVPFFPRSEPPSSKRPTSRM 252
Query: 211 ENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGL------GMTEEELPQ------ 258
++ LDGGA FY+ Y KDGR+M+VG LE +FY L G E+ +
Sbjct: 253 QHTLDGGAPFYNVYTCKDGRWMSVGCLEPRFYETFLQKFLKAVPAGFVEQSFLKWTPTLQ 312
Query: 259 ------HEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSF 312
+E R + F+ + W ++F +DAC PVLS ++A
Sbjct: 313 RQYDRVNEWPKLRKLFEDGFRLYDRDYWAKVFHESDACAVPVLSPAEA---------AVL 363
Query: 313 IPNRAGVV--APAPAPRLSRTPGTSKITEHNP-------------------APGVHTREV 351
+ N V APAP P LSRTP + + P APG HT +V
Sbjct: 364 VSNEQSPVESAPAPHPLLSRTPARTIASSGPPKSHEDGSWQSEHIRSNGYLAPGSHTEDV 423
Query: 352 LRH-FGYSDANIEELIREDVIE 372
LR SD IEEL + ++I
Sbjct: 424 LREVLALSDREIEELHKGNIIR 445
>gi|312141829|ref|YP_004009165.1| fatty acid-CoA racemase [Rhodococcus equi 103S]
gi|311891168|emb|CBH50487.1| putative fatty acid-CoA racemase [Rhodococcus equi 103S]
Length = 390
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 201/343 (58%), Gaps = 11/343 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L G+ V+E + P G++L + GA ++R+ + ++ G+ +
Sbjct: 16 LAGVRVVEMEAIGPLLHAGLMLADLGADIVRVVRPSSKASDDGIDDADAGMLRGRTVVTA 75
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+L +G +++L +DV++E R G MEKL LGPDV + NP L+Y R++G+GQ+GP
Sbjct: 76 DLTSDRGRRRVRSLIGSADVLMEGSRPGTMEKLGLGPDVCLQDNPGLVYGRMTGWGQEGP 135
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NYL LSG L LG P+PP N A+FGGG + +GI+ AL+ER+++G
Sbjct: 136 LAREAGHDVNYLALSGALEPLGPATGPPSPPLNYVANFGGGSMFLLVGILAALWERTRTG 195
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D M++G++ + + + Q W RG NLLDG A FY YE D FMAVGA
Sbjct: 196 RGQVVDAAMIDGASSVTALVRSWQHAGRWSPDRGTNLLDGSAPFYRAYECADHGFMAVGA 255
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFK----EKTQAEWCEIFDNTDACVT 292
LE +Y + + GLG+ LP + +L E+F + +++W +F+ +ACVT
Sbjct: 256 LEDVYYDRFVRGLGLDPAALPDRWDRSNWNELAERFDGIFASRARSDWTAVFEGANACVT 315
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
PVLSL +AT H H HR +F + AG + PAPAPRL T G +
Sbjct: 316 PVLSLQEATLHSHATHRAAFT-DTAGFMMPAPAPRLGSTRGAA 357
>gi|395774213|ref|ZP_10454728.1| fatty acid-CoA racemase [Streptomyces acidiscabies 84-104]
Length = 373
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 196/335 (58%), Gaps = 10/335 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-----DTVGYGKKSLCIN 57
L G+ V+E AG+ P PF M+L + GA V+R+D+ G +P + D K+S+ ++
Sbjct: 9 LAGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPG-RPVLAIDPAYDVTNRNKRSVVVD 67
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G + +LA ++DV++E R GV E+L +GP NP L+Y R++G+GQ+GP
Sbjct: 68 LKSPQGAQQVLDLAARADVLVEGLRPGVAERLGVGPRECHARNPALVYGRMTGWGQEGPL 127
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDI Y+ ++G L + G +R P P NL D+ GG L +G++ AL +G
Sbjct: 128 AHRAGHDIAYIAVTGALGITGTPDRPPPAPANLLGDYAGGSLYLVVGVLAALHHARATGT 187
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+G+A+L S L W R NLLDGG +Y TYET DG MAVGAL
Sbjct: 188 GQVVDAAIVDGTAHLTSMLHGMLAAGGWQDRRAANLLDGGCPYYGTYETADGGHMAVGAL 247
Query: 238 ESQFYAQLLAGLGM---TEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
E QFY + A LG+ + R + +FK +T+ EW F+++DACV PV
Sbjct: 248 EPQFYDEFTALLGLDGFADARKDPARWPALREAVAARFKARTRDEWTARFEDSDACVAPV 307
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS 329
LSL +A HPH RG+F + G+ PAPAPR S
Sbjct: 308 LSLREAPHHPHLAARGTFT-DHGGITQPAPAPRFS 341
>gi|311107940|ref|YP_003980793.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310762629|gb|ADP18078.1| CoA-transferase family III family protein 35 [Achromobacter
xylosoxidans A8]
Length = 376
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 206/356 (57%), Gaps = 14/356 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRID-KHGAQPFVQDTVGYG-----KKSLCI 56
L GI ++E AG+ P P M+L + GATV+RI+ K A V+ + Y ++S+ +
Sbjct: 4 LAGIRIIELAGIGPGPMAAMLLADMGATVLRIERKEPADLGVKRELKYNLLLRNRRSIAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++++ L ++D ++E FR GV E+L LGP +NPRL+Y R++G+GQDGP
Sbjct: 64 DLKDPRAVALVLRLLRKADGLIEGFRPGVTERLGLGPQACLAANPRLVYGRITGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ +AGHDINY+ ++G+L +G + PTPP L DFGGGG ALG++ A+ E +SG
Sbjct: 124 LAQVAGHDINYIAVTGVLDAIGRAGQPPTPPLALVGDFGGGGPFLALGMLAAIIEARQSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +++G A + + + W RG N+LD GA FYD Y DG +++VG
Sbjct: 184 LGQVVDAAVMDGVASMATAFFGLAASGSWQPQRGSNILDSGAPFYDVYACADGLWLSVGP 243
Query: 237 LESQFYAQLLAGLGMTEE---ELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDA 289
+E +F+ +LL LG+ ++ +L H+ T R L F ++ + +WCE + D
Sbjct: 244 IERRFHERLLRQLGLDDDAIRDLGDHQDRTTWPRLRTVLAAAFAQRNRDDWCERLAHLDV 303
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG 345
CV PV +L A HP RG+ + G+ PAPAPR SRTP P G
Sbjct: 304 CVAPVQTLRDAAMHPQVKARGTLL-EVDGITQPAPAPRFSRTPNARPTAPQPPDAG 358
>gi|22651848|gb|AAM97697.1| unknown [Kallichroma tethys]
Length = 354
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/284 (48%), Positives = 187/284 (65%), Gaps = 8/284 (2%)
Query: 22 MILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPF 81
M+L ++GA+V+RID G D + K S+ ++LK A V+ +L Q+DV+++PF
Sbjct: 1 MLLADYGASVLRID--GPPSPRGDVLARHKFSISLDLKDASSREVLLSLVAQADVLIDPF 58
Query: 82 RKGVMEKLQLGP-DVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWR 140
R V+E+L+L P DVL K NPRLI ARL+G+ +DG Y MAGHDINYL +SG+LS+LG
Sbjct: 59 RPEVLERLELSPADVLLKLNPRLIVARLTGFRRDGEYKDMAGHDINYLAVSGVLSMLGRA 118
Query: 141 NRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQ 200
+P P N+ DF GGG+MCA+GI++AL R SG GQV++ NMV+GSAYL + T
Sbjct: 119 TESPYAPGNMLGDFAGGGMMCAVGILLALVSRQTSGLGQVVENNMVDGSAYLATMPRLTT 178
Query: 201 DTFLWDKPRGENLLDGGAHFYDTYETKD-GRFMAVGALESQFYAQLLAGLGMTEEELPQH 259
W PRG+N LDGG +YDTYE KD G+++AVGALE +FY LL GLG++ +LP
Sbjct: 179 KMPFWGAPRGQNTLDGGCPWYDTYEAKDRGQYVAVGALEPRFYDALLHGLGLSSADLPSR 238
Query: 260 EVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
+ + RA KFKE+T+ EW IF T CV+PVL Q
Sbjct: 239 DNKDDWPSLRAVFASKFKERTRREWELIFGGTGPCVSPVLQQDQ 282
>gi|86139736|ref|ZP_01058303.1| hypothetical protein MED193_02495 [Roseobacter sp. MED193]
gi|85823627|gb|EAQ43835.1| hypothetical protein MED193_02495 [Roseobacter sp. MED193]
Length = 371
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 211/364 (57%), Gaps = 13/364 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-PFVQDT----VGYGKKSLCIN 57
LKG+ ++E AGL PAPF M L + GA V+RI + G + P D ++SL ++
Sbjct: 8 LKGVRIVEMAGLGPAPFAAMHLADLGAEVVRIARPGQKFPLPIDAKYNLFNRSRRSLTLD 67
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
L KA+ + + L +++V++E FR G MEKL GP+ + NP L+Y RL+G+GQ+GP
Sbjct: 68 LTKARDVDRLWQLIERAEVLIEGFRPGKMEKLGFGPEQVQARNPALVYGRLTGWGQEGPL 127
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY ++G + LG +R P P NL AD GGG +M +GI+ AL +G+
Sbjct: 128 AHAAGHDMNYAAITGAVWGLGDADRPPPAPMNLIADQGGGAMMLNVGILAALTHARATGQ 187
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D M +G L + W R + ++GG +Y YET DG++++VG L
Sbjct: 188 GQVVDTAMTDGVNLLMTMQHGLVACGAWSDKRSGDFINGGVAWYRCYETGDGKYVSVGCL 247
Query: 238 ESQFYAQLLAGLGMTEE-ELPQHEVETGRAK----LTEKFKEKTQAEWCEIFDNTDACVT 292
E QF+A+LLA LG+T++ T +A LTE F TQ EWC+I + +DAC
Sbjct: 248 EPQFFAELLALLGLTDDPRFADQYAPTAQASMMDALTEIFLTATQQEWCDILEGSDACFA 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PV+SL+ A+ H HN RGSF+ G+ P PAPR SRT + T A + E+L
Sbjct: 308 PVVSLADASDHAHNRARGSFV-TVGGIEMPTPAPRFSRTQPDTPTT--GDAGEISLDEIL 364
Query: 353 RHFG 356
H+G
Sbjct: 365 EHWG 368
>gi|418048073|ref|ZP_12686161.1| Alpha-methylacyl-CoA racemase [Mycobacterium rhodesiae JS60]
gi|353193743|gb|EHB59247.1| Alpha-methylacyl-CoA racemase [Mycobacterium rhodesiae JS60]
Length = 393
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 224/374 (59%), Gaps = 16/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-------AQPFVQDTVGYGKKSLC 55
L G+ V+E L P PF GM+L++ GATVI+ID+ + PF D + G++SL
Sbjct: 9 LAGLQVVEMRSLGPGPFAGMMLSDLGATVIQIDRPAGGHVVGPSAPF--DLMNRGRQSLA 66
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK+ V ++D+++E +R GVME+L LGPDV + NPRL+Y R++G+GQDG
Sbjct: 67 LDLKQPGAAEVALRFIERADILIEGYRPGVMERLGLGPDVCLEHNPRLLYGRMTGWGQDG 126
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P+++ GHDINY+G++G+L +G P PP +L DFGGG ++ +G++ AL R+ +
Sbjct: 127 PWANRVGHDINYIGVTGVLHAMGRPESPPAPPLSLVGDFGGGAMLLVVGLLAALQHRAHT 186
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQV+D + +G++ + L W + RG+N++D GA FYDTY T DG ++AVG
Sbjct: 187 GVGQVVDAAITDGTSAMAMSLHGMLAEGTWTRNRGDNVIDSGAPFYDTYATADGGYIAVG 246
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
A+E QF+A L+ L + + L + + +L E F +T+ + + DACV
Sbjct: 247 AIEPQFWAALVQALRLPVDWLSCQNDRSRWPEMKQRLAELFSSRTRDDLVADLGHLDACV 306
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
TPV ++ +AT P R SF+ GVV PAPAPR S TPG ++ P PG E+
Sbjct: 307 TPVFTVREATQSPVLQARDSFV-TIDGVVQPAPAPRFSATPG--RVQGPPPTPGGQGYEL 363
Query: 352 LRHFGYSDANIEEL 365
L+ GYS+ I +L
Sbjct: 364 LKGVGYSNDEIADL 377
>gi|294677279|ref|YP_003577894.1| alpha-methylacyl-CoA racemase [Rhodobacter capsulatus SB 1003]
gi|294476099|gb|ADE85487.1| alpha-methylacyl-CoA racemase [Rhodobacter capsulatus SB 1003]
Length = 367
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 201/343 (58%), Gaps = 14/343 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-------GKKSLC 55
L G+ ++E +GL P PF ++ + GA VIRI + GA+ +G G+ L
Sbjct: 6 LTGLRIVEISGLGPTPFTAQLMADMGAEVIRIARPGARGAAAHVLGMAVDPLDRGRDVLE 65
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK +V + L ++D ++E R G ME+L LGPD + NPRL+Y R++G+GQ G
Sbjct: 66 LDLKSPADQAVARQLILRADALIEGMRPGAMERLGLGPDAFPE-NPRLVYGRMTGWGQSG 124
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY+ LSG L +G P P NL DFGGGGL A G++ A+ + +
Sbjct: 125 PLAQTAGHDINYIALSGALGSIG-TPETPVLPLNLVGDFGGGGLYLAFGMLAAILQARAT 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQV+D + +G A+L ++ LW PRG NLLDGG +Y TY G A+G
Sbjct: 184 GQGQVVDAAITDGVAHLMGMISGLAGQGLWSAPRGGNLLDGGVPYYTTYRCACGGHFAIG 243
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE +F+A+ G ELP + RA L +F E+++AEW IF +DAC
Sbjct: 244 PLEDKFWAEFQRLAGFAPGELPDRKDRATWPALRAALQARFAERSRAEWERIFAGSDACA 303
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGT 334
TPVL+L +A +HPHN RG+++ + G+ PAPAP+LSRTPG
Sbjct: 304 TPVLNLQEAAAHPHNRARGAYLTHE-GLTQPAPAPKLSRTPGA 345
>gi|407986090|ref|ZP_11166649.1| coA-transferase III family protein [Mycobacterium hassiacum DSM
44199]
gi|407372358|gb|EKF21415.1| coA-transferase III family protein [Mycobacterium hassiacum DSM
44199]
Length = 332
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 134/315 (42%), Positives = 197/315 (62%), Gaps = 7/315 (2%)
Query: 23 ILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFR 82
+L + GA V+R+ + T G++ + NLK ++ ++ L +++DV++E FR
Sbjct: 1 MLADLGADVVRVQRPRKTTAPPGTEYRGRQIVEANLKDPADVAAVRRLIDRADVLIEGFR 60
Query: 83 KGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNR 142
GV E+L LGPD C +NP L+Y R++G+GQ GP ++ AGHDINY+ ++G+L+ +G +R
Sbjct: 61 PGVAERLGLGPDDCCATNPGLVYLRVTGWGQTGPRANEAGHDINYISITGVLNAIGPADR 120
Query: 143 NPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDT 202
P PP NL D+GGG + +G++ AL ER SGRGQVID MV+G A L + +
Sbjct: 121 PPVPPLNLVGDYGGGSMTAVVGVLAALIERHSSGRGQVIDAAMVDGVAQLTHAMWSMRAN 180
Query: 203 FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL-PQHEV 261
W RG N DG A FY YE DGR++AVGALE +F+A+LL+ LG+ E++ PQ +V
Sbjct: 181 NRWSDERGVNTFDGSAPFYRCYECADGRYVAVGALEPEFFAELLSVLGIEPEDVGPQRDV 240
Query: 262 ETGRAKL----TEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRA 317
+G ++ +KF ++T+ EW F TDACVTPVLS+++A + P R +
Sbjct: 241 -SGWPRMHKLFADKFAQRTRDEWAATFAGTDACVTPVLSMAEAVTDPQLKARNVLV-EAD 298
Query: 318 GVVAPAPAPRLSRTP 332
G + PAPAPR SRTP
Sbjct: 299 GRIQPAPAPRFSRTP 313
>gi|340357301|ref|ZP_08679920.1| alpha-methylacyl-CoA racemase [Sporosarcina newyorkensis 2681]
gi|339617867|gb|EGQ22479.1| alpha-methylacyl-CoA racemase [Sporosarcina newyorkensis 2681]
Length = 381
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 208/378 (55%), Gaps = 29/378 (7%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTV 47
M L I VL+ L P P+C M+L +FGA VI+I+ + + ++
Sbjct: 1 MVLTSIRVLDLTRLLPGPYCTMLLADFGAEVIKIEDPKIGDYARMYEPKLDEDSALFHSL 60
Query: 48 GYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYAR 107
KKS+C++LK +G + +D+++E FR GVME+L LG L NPRLIY
Sbjct: 61 NRNKKSVCLDLKTEEGKHNFIKMVENADIVVESFRPGVMERLGLGYQTLKLVNPRLIYCA 120
Query: 108 LSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVM 167
++GYGQ GPY GHDINYL +G+L+L+G ++ P P AD GGG L A+GI++
Sbjct: 121 VTGYGQTGPYKDFPGHDINYLSFAGLLNLMGEKDGKPIVPSTQIADIGGGALPAAVGILL 180
Query: 168 ALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDK---PRGENLLDGGAHFYDTY 224
ALFER +SG+GQ +D +M++G SWL +L D RGE +L GG Y Y
Sbjct: 181 ALFERERSGKGQFVDISMLDGVI---SWLQTILPNYLADSVTTKRGEQMLSGGLAVYSIY 237
Query: 225 ETKDGRFMAVGALESQFYAQLLAGLGMTE----EELPQHEVETGRAKLTEKFKEKTQAEW 280
ETKD RF++VGALE +F+ G+G ++ P HE + ++ +KT AEW
Sbjct: 238 ETKDARFLSVGALEEKFWQAFCHGIGRSDFIPRILAPPHEQHRLKYEIQTIIYQKTLAEW 297
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHR---GSFIPNRAGVVAPAPAP-RLSRTPGTSK 336
EIF+N +ACVTPVL+L + TS P + R S G + P +LS TPG +
Sbjct: 298 MEIFENKEACVTPVLTLEEMTSDPQIMAREMIQSMKHETLGTIKQIGIPIKLSETPGVIR 357
Query: 337 ITEHNPAPGVHTREVLRH 354
P G HT E+L+
Sbjct: 358 FI--APKLGEHTEEILKE 373
>gi|339328855|ref|YP_004688547.1| acyl-CoA transferase [Cupriavidus necator N-1]
gi|338171456|gb|AEI82509.1| acyl-CoA transferase [Cupriavidus necator N-1]
Length = 371
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 198/332 (59%), Gaps = 11/332 (3%)
Query: 11 FAGLAPAPFCGMILNEFGATVIRIDKHGAQPF------VQDTVGYGKKSLCINLKKAKGL 64
AG+ P P GM+L + GA V+RI++ G D + G+K++ ++LK+ +
Sbjct: 1 MAGIGPGPLAGMMLADMGAEVLRIERPGETDLGVKRERRYDLMLRGRKAIALDLKEPLAV 60
Query: 65 SVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHD 124
+ +L +D+++E FR GVME+L LGP+ NPRL+Y R++G+GQ GP +S GHD
Sbjct: 61 QAVLDLVASADMLIEGFRPGVMERLGLGPEACHARNPRLVYGRVTGWGQTGPLASSPGHD 120
Query: 125 INYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCN 184
INY+ L+G L+ +G R + P+ P DF GGG+ G++ ALFE SKSG GQV+D
Sbjct: 121 INYIALTGALNAIGRRGQPPSIPPAYLGDFAGGGMFLVAGVLAALFEASKSGMGQVVDAA 180
Query: 185 MVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQ 244
+V+G+A L S +W+ RG N+LD GAH+Y+ Y K G +++VG +E++FY
Sbjct: 181 IVDGTAALSSVFFGLSAAGMWNAERGTNVLDSGAHYYNVYACKGGGWISVGPIEARFYRD 240
Query: 245 LLAGLGMTE----EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQA 300
LLA +G+ E+L +L F +T+ EW + + TDACV PVL ++A
Sbjct: 241 LLARIGIDPDSLGEQLDPRNWPDATDRLAAIFLTRTRDEWTALLEGTDACVAPVLDFTEA 300
Query: 301 TSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
HPH R +F+ + GV PAPAPR SRTP
Sbjct: 301 PHHPHLQARQTFV-DIDGVTQPAPAPRFSRTP 331
>gi|419955310|ref|ZP_14471440.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri TS44]
gi|387967937|gb|EIK52232.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri TS44]
Length = 361
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 199/340 (58%), Gaps = 5/340 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+G+ VLEFAG+ P P C M+L + GA V+R+++ G + V G+K + ++++ A
Sbjct: 12 LRGLRVLEFAGIGPGPHCAMLLADMGAEVLRVEREGGTGWANPVVDRGRKVMTLDIRNAS 71
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + LA +DV++E FR GVME+L LGPD L NPRLIY R++G+GQ GP + AG
Sbjct: 72 GRARCMELAQGADVLIEGFRPGVMERLGLGPDELLARNPRLIYGRMTGWGQTGPLARAAG 131
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ + + PP NL DFGGG L A+GI+ AL+ER +SG+GQVID
Sbjct: 132 HDINYIALTGALAAIRGESGPAVPPLNLVGDFGGGSLYLAVGILAALWERERSGQGQVID 191
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+G + L ++ + R N L G A Y Y DGR +A+GALE+ F+
Sbjct: 192 AAIVDGVSSLMTFFAGLLPSGRIGMQRERNPLGGAAPNYRCYLCADGREIAIGALEAPFW 251
Query: 243 AQLLAGLGMTE---EELPQHEVETGRAK-LTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+LL + + E G+ L F ++QAEWC + + +DAC PVL L
Sbjct: 252 RELLERIDAPQALWEGCADPAAWAGQGDALARLFAGRSQAEWCALLEGSDACFAPVLPLE 311
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
+A H H RG + G + APAPR SRTPG ++ T
Sbjct: 312 EAAGHVHMRQRGVY-QEVDGQLQAAPAPRFSRTPGKARRT 350
>gi|148556302|ref|YP_001263884.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
gi|148501492|gb|ABQ69746.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
Length = 393
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 198/338 (58%), Gaps = 8/338 (2%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--HGAQPFVQDTVGYGKKSLCINL 58
+ L G+ V++ G+ P PFC ++L GA+VIR ++ + D G+ ++ +L
Sbjct: 20 LPLAGLCVVDLGGIGPGPFCSLVLAALGASVIRFERPSRAGDGDLVDPFADGRATIHADL 79
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + +L ++D+++E FR G E+L LGPD NPRLIY R++G+GQ GP++
Sbjct: 80 KTPEGKAAALSLVGKADMLIEGFRPGTTERLGLGPDDCAALNPRLIYGRMTGWGQSGPFA 139
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+ AGHDINY+ LSG+L +G P P NL DF GG +G++ AL ER +SGRG
Sbjct: 140 ADAGHDINYIALSGVLHAIGTCEGGPVVPLNLLGDFAGGSFFLIIGLLAALAERERSGRG 199
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QVID +V+G+A L ++ + W R NLLDGGA +Y YET DG +A+GALE
Sbjct: 200 QVIDAAIVDGTAALSWFIQALRRHGAWRDAREANLLDGGAPWYGVYETADGGHVALGALE 259
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QFY + A G+ + LP + T RA++ F+ +++ EW +F +DACV PV
Sbjct: 260 PQFYDRFAAVAGLDIDTLPSRDDPTQWPALRARIATLFRSRSRDEWARLFAGSDACVAPV 319
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
LSLS+A HPH + RG F + G P P R+P
Sbjct: 320 LSLSEAPRHPHVMARGVF--DAGGGDLPRLTPLFGRSP 355
>gi|167717442|ref|ZP_02400678.1| CAIB/BAIF family protein [Burkholderia pseudomallei DM98]
Length = 377
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 211/374 (56%), Gaps = 15/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 4 LHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRDGDPLDLGRRAIFNRGKRSLAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 64 DLKQPEAMGAVLRLVEHADALIEGMRPGVMERLGLGPDACFARNPKLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 124 LAHAAGHDINYIGLSGALWYAGQPGDAPFAPPTLVGDLGGGALYLAMGVLAGIVDARLRG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQ++D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 184 KGQIVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGYVSVGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA L+ LG+ +++ ++ + R +L E F + +A W E+ + TDAC
Sbjct: 243 LEPQFYALLVDKLGLADDDDFRNPYDASRWPRLRERLAEIFASRPRAHWVELMEGTDACF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A SHPH RG + R G++ APAPR S +P P G + +
Sbjct: 303 APVLSPAEAQSHPHLAARGVYA-QRDGILQAAPAPRFSGSPNAQPGAV--PKRGADSAAI 359
Query: 352 LRHFGYSDANIEEL 365
LR G+++ I L
Sbjct: 360 LREAGFAEDEIAAL 373
>gi|254184134|ref|ZP_04890725.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1655]
gi|184214666|gb|EDU11709.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1655]
Length = 431
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 212/374 (56%), Gaps = 15/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 58 LHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRDGDPLNLGRRAIFNRGKRSLAL 117
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + L +D ++E R GVME+L LGPD+ NP+L+Y R++G+GQDGP
Sbjct: 118 DLKQPEAVGAVLRLVEHADALIEGMRPGVMERLGLGPDMCFARNPKLVYGRMTGWGQDGP 177
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 178 LAHAAGHDINYIGLSGALWYAGQPGDAPFAPPTLVGDLGGGALYLAMGVLAGIVDARLRG 237
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQ++D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 238 KGQIVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGYVSVGA 296
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA L+ LG+ +++ ++ + R +L E F + +A W E+ + TDAC
Sbjct: 297 LEPQFYALLVDKLGLADDDDFRNPYDASRWPRLRERLAEIFASRPRAHWVELMEGTDACF 356
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A SHPH RG + R G++ APAPR S +P P G + +
Sbjct: 357 APVLSPAEAQSHPHLAARGVYA-QRDGILQAAPAPRFSGSPNAQPGAV--PKRGADSAAI 413
Query: 352 LRHFGYSDANIEEL 365
LR G+++ I L
Sbjct: 414 LREAGFAEDEIAAL 427
>gi|384107456|ref|ZP_10008356.1| fatty acid-CoA racemase [Rhodococcus imtechensis RKJ300]
gi|383832403|gb|EID71877.1| fatty acid-CoA racemase [Rhodococcus imtechensis RKJ300]
Length = 390
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 208/382 (54%), Gaps = 22/382 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDT--------VGYGKKSL 54
L GI VLE G+ P PF GM+L + GA VIR+D+ VQD + ++S+
Sbjct: 17 LSGIRVLELGGIGPGPFAGMLLGDLGAEVIRVDR------VQDAGKSDPHPILHRNRRSV 70
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
I+LK +G V+ LA +D ++E FR V E+L +GPD L NP L+YAR++G+GQD
Sbjct: 71 TIDLKDPRGADVVLALAETADAVIEGFRPTVAERLGVGPDALLARNPALVYARMTGWGQD 130
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP ++ GHDIN++ L+G+L +G + P P NL D GGGG+ A G++ A+
Sbjct: 131 GPLAAEPGHDINFIALTGVLHAIGPAD-EPVVPLNLVGDMGGGGMFLAFGLLAAVVNARS 189
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
+GRGQV+D M +GSA L + + + W R N +DG + Y Y D R +A+
Sbjct: 190 TGRGQVVDAAMTDGSATLLAMIHGFLNAGGWQDERERNSIDGASPCYGVYRCSDDRHIAL 249
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDA 289
G +S+ Y LL LG+ ++ + G R KL E F + + W ++F A
Sbjct: 250 GVGDSRSYTALLEVLGLADDPDFADRRDQGAWPVMRKKLGEVFCTRGRDTWEQVFAGRGA 309
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
CVTPVLSL++A HPHNV R +F + G + PAPAPR S TP P G T
Sbjct: 310 CVTPVLSLTEAPRHPHNVARNTFRTSPEGHIEPAPAPRFSGTPAAEP--SRAPVVGSDTD 367
Query: 350 EVLRHFGYSDANIEELIREDVI 371
VL H GY I +L V+
Sbjct: 368 GVLVHAGYGPDRIAQLRARGVV 389
>gi|126436610|ref|YP_001072301.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. JLS]
gi|126236410|gb|ABN99810.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mycobacterium sp. JLS]
Length = 376
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/333 (43%), Positives = 203/333 (60%), Gaps = 7/333 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+E AG+ P P M+L + GA V+R+++ G G++ + +LK A
Sbjct: 25 LAGVKVVELAGMGPGPHAAMLLADLGAEVVRVERPGRGGGGAQL--RGRRIVSADLKDAG 82
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
L ++ L ++SDV++E FR GV E++ LGPD C+ N L+Y R++G+GQ GP ++ AG
Sbjct: 83 DLDQVRRLIDRSDVLIEGFRPGVTERMGLGPDECCRRNRGLVYTRVTGWGQTGPRAAQAG 142
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+GL+G+L +G +R P PP N+ D+GGG L +G++ AL ER SGRGQV+D
Sbjct: 143 HDINYIGLTGLLHAIGPPDRPPAPPLNVVGDYGGGSLFAVVGVLAALVERQTSGRGQVVD 202
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V G+A L L + W RG N+ DG A FY TYE DG F+AVGALE QFY
Sbjct: 203 AAIVNGTALLAHVLWSMRADGRWSGERGANIFDGSAPFYRTYECADGGFVAVGALEPQFY 262
Query: 243 AQLLAGLGMTEEEL-PQHEVETGRAK---LTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A+LL L + E L PQ + A L ++F++ + W E+F TDACVTPVL+++
Sbjct: 263 AELLRLLDIDPETLGPQRDRAGWPAMGRLLADRFRQYPRDHWSEVFAGTDACVTPVLTIA 322
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+A H RG F+ + GV P PAP SRT
Sbjct: 323 EAMEDSHLSARGVFV-DVNGVRQPGPAPLFSRT 354
>gi|226366510|ref|YP_002784293.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
gi|226245000|dbj|BAH55348.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
Length = 361
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 199/335 (59%), Gaps = 12/335 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L G+ V+E A + P+ M+L + GA V+R+ + G P + + GK+ + ++LK
Sbjct: 7 LIGLRVVELANIGPSTHAAMVLADLGADVVRVQRPGLLPEDHTSAEHLHRGKRVVEVDLK 66
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + + LA+ +DV++E FR GV+E+L LGP ++ + L+YAR++G+GQDGP +
Sbjct: 67 DTREAADVPALASGADVLVEGFRPGVVERLGLGPAIVLEHVSSLVYARVTGWGQDGPRAD 126
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDIN++ + IL +G P PP N+ A F GG + GI+ AL+ER +SG GQ
Sbjct: 127 KAGHDINFIAPTSILHSIGRGQERPVPPLNMVAGFAGGSMFMVTGILSALWERQRSGLGQ 186
Query: 180 VIDCNMVEGSAYLG--SWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
V+D + EG+A L +W R Q W RG NL+DG F+DTYE DG +MAVGA
Sbjct: 187 VVDVSAAEGAAVLTQHAWSMRGQGR--WSDERGANLVDGSCPFWDTYECSDGHYMAVGAF 244
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QFY +L+A LG+ LP + + R L +F +++AEW F + DACVTP
Sbjct: 245 EPQFYDRLIAVLGLDPNTLPDRDDRSRWPELRVLLAARFTTRSRAEWAAAFADVDACVTP 304
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
V S ++A + PH RGSF+ GVV P PAPR
Sbjct: 305 VSSFAEAPTDPHFSTRGSFV-EIDGVVQPMPAPRF 338
>gi|53717703|ref|YP_106689.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei K96243]
gi|76809698|ref|YP_331704.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1710b]
gi|126451519|ref|YP_001064360.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1106a]
gi|167813561|ref|ZP_02445241.1| CAIB/BAIF family protein [Burkholderia pseudomallei 91]
gi|167822101|ref|ZP_02453572.1| CAIB/BAIF family protein [Burkholderia pseudomallei 9]
gi|167900696|ref|ZP_02487901.1| CAIB/BAIF family protein [Burkholderia pseudomallei NCTC 13177]
gi|217424056|ref|ZP_03455556.1| CAIB/BAIF family protein [Burkholderia pseudomallei 576]
gi|226193077|ref|ZP_03788687.1| CAIB/BAIF family protein [Burkholderia pseudomallei Pakistan 9]
gi|237814465|ref|YP_002898916.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei MSHR346]
gi|242317655|ref|ZP_04816671.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1106b]
gi|254194639|ref|ZP_04901070.1| CAIB/BAIF family protein [Burkholderia pseudomallei S13]
gi|254259792|ref|ZP_04950846.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1710a]
gi|254298599|ref|ZP_04966050.1| CAIB/BAIF family protein [Burkholderia pseudomallei 406e]
gi|418375495|ref|ZP_12965576.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 354a]
gi|418539558|ref|ZP_13105149.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1258a]
gi|418545718|ref|ZP_13110965.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1258b]
gi|418552133|ref|ZP_13117025.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 354e]
gi|52208117|emb|CAH34047.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei K96243]
gi|76579151|gb|ABA48626.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1710b]
gi|126225161|gb|ABN88701.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1106a]
gi|157808664|gb|EDO85834.1| CAIB/BAIF family protein [Burkholderia pseudomallei 406e]
gi|169651389|gb|EDS84082.1| CAIB/BAIF family protein [Burkholderia pseudomallei S13]
gi|217393119|gb|EEC33141.1| CAIB/BAIF family protein [Burkholderia pseudomallei 576]
gi|225934677|gb|EEH30654.1| CAIB/BAIF family protein [Burkholderia pseudomallei Pakistan 9]
gi|237503002|gb|ACQ95320.1| alpha-methylacyl-CoA racemase (2-methylacyl-CoAracemase)
[Burkholderia pseudomallei MSHR346]
gi|242140894|gb|EES27296.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1106b]
gi|254218481|gb|EET07865.1| CAIB/BAIF family protein [Burkholderia pseudomallei 1710a]
gi|385364312|gb|EIF70030.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1258a]
gi|385366381|gb|EIF72003.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1258b]
gi|385373594|gb|EIF78610.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 354e]
gi|385378307|gb|EIF82781.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 354a]
Length = 377
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 211/374 (56%), Gaps = 15/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 4 LHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRDGDPLDLGRRAIFNRGKRSLAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 64 DLKQPEAVGAVLRLVEHADALIEGMRPGVMERLGLGPDTCFARNPKLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 124 LAHAAGHDINYIGLSGALWYAGQPGDAPFAPPTLVGDLGGGALYLAMGVLAGIVDARLRG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQ++D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 184 KGQIVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGYVSVGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA L+ LG+ +++ ++ + R +L E F + +A W E+ + TDAC
Sbjct: 243 LEPQFYALLVDKLGLADDDDFRNPYDASRWPRLRERLAEIFASRPRAHWVELMEGTDACF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A SHPH RG + R G++ APAPR S +P P G + +
Sbjct: 303 APVLSPAEAQSHPHLAARGVYA-QRDGILQAAPAPRFSGSPNAQPGAV--PKRGADSAAI 359
Query: 352 LRHFGYSDANIEEL 365
LR G+++ I L
Sbjct: 360 LREAGFAEDEIAAL 373
>gi|121599711|ref|YP_994764.1| alpha-methylacyl-CoA racemase [Burkholderia mallei SAVP1]
gi|126440424|ref|YP_001057131.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 668]
gi|126448799|ref|YP_001082254.1| alpha-methylacyl-CoA racemase [Burkholderia mallei NCTC 10247]
gi|134281389|ref|ZP_01768097.1| CAIB/BAIF family protein [Burkholderia pseudomallei 305]
gi|167736483|ref|ZP_02409257.1| CAIB/BAIF family protein [Burkholderia pseudomallei 14]
gi|167843706|ref|ZP_02469214.1| CAIB/BAIF family protein [Burkholderia pseudomallei B7210]
gi|167892187|ref|ZP_02479589.1| CAIB/BAIF family protein [Burkholderia pseudomallei 7894]
gi|167908914|ref|ZP_02496005.1| CAIB/BAIF family protein [Burkholderia pseudomallei 112]
gi|167916957|ref|ZP_02504048.1| CAIB/BAIF family protein [Burkholderia pseudomallei BCC215]
gi|254357319|ref|ZP_04973593.1| alpha-methylacyl-CoA racemase [Burkholderia mallei 2002721280]
gi|386860192|ref|YP_006273141.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1026b]
gi|418537420|ref|ZP_13103060.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1026a]
gi|121228521|gb|ABM51039.1| alpha-methylacyl-CoA racemase [Burkholderia mallei SAVP1]
gi|126219917|gb|ABN83423.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 668]
gi|126241669|gb|ABO04762.1| alpha-methylacyl-CoA racemase [Burkholderia mallei NCTC 10247]
gi|134247056|gb|EBA47142.1| CAIB/BAIF family protein [Burkholderia pseudomallei 305]
gi|148026383|gb|EDK84468.1| alpha-methylacyl-CoA racemase [Burkholderia mallei 2002721280]
gi|385350129|gb|EIF56681.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1026a]
gi|385657320|gb|AFI64743.1| alpha-methylacyl-CoA racemase [Burkholderia pseudomallei 1026b]
Length = 377
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 211/374 (56%), Gaps = 15/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 4 LHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRDGDPLDLGRRAIFNRGKRSLAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 64 DLKQPEAVGAVLRLVEHADALIEGMRPGVMERLGLGPDACFARNPKLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 124 LAHAAGHDINYIGLSGALWYAGQPGDAPFAPPTLVGDLGGGALYLAMGVLAGIVDARLRG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQ++D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 184 KGQIVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGYVSVGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA L+ LG+ +++ ++ + R +L E F + +A W E+ + TDAC
Sbjct: 243 LEPQFYALLVDKLGLADDDDFRNPYDASRWPRLRERLAEIFASRPRAHWVELMEGTDACF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A SHPH RG + R G++ APAPR S +P P G + +
Sbjct: 303 APVLSPAEAQSHPHLAARGVYA-QRDGILQAAPAPRFSGSPNAQPGAV--PKRGADSAAI 359
Query: 352 LRHFGYSDANIEEL 365
LR G+++ I L
Sbjct: 360 LREAGFAEDEIAAL 373
>gi|393231527|gb|EJD39119.1| CoA-transferase family III [Auricularia delicata TFB-10046 SS5]
Length = 388
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 225/396 (56%), Gaps = 30/396 (7%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCINLK 59
MAL+GI V+E AGLAP PF GM+L + GA+V+RID+ D + GK+SL ++L+
Sbjct: 1 MALRGIRVIELAGLAPVPFAGMMLADLGASVVRIDRPSPVSVPAGDILTRGKRSLSLDLR 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS---NPRLIYARLSGYGQDGP 116
+GL+V K L Q+DV+L+P+R GV+E++ LGPDV N RL+YAR+SG P
Sbjct: 61 APQGLAVGKQLIAQADVLLDPYRPGVLERMGLGPDVFLGDQGLNERLVYARISGVYLCYP 120
Query: 117 YSSM-AGHDINYLGLSGILSLLGWR-NRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
AGHD+NYL +G+L LL R + P+ P NL ADF GG +CA G++ AL ER++
Sbjct: 121 TPDRSAGHDLNYLAATGVLHLLPRRADGTPSFPVNLLADFASGGHLCATGVLAALLERAR 180
Query: 175 SGRGQVIDCNMVEGSAYLGSW-LTRTQD----TFLWDKPRGENLLDGGAHFYDTYETKDG 229
+G+GQV+ +MV G+ Y+ S+ L QD F + G LL GGA FY YE KDG
Sbjct: 181 TGKGQVVATDMVSGARYVSSFVLAHAQDPYSSLFASEHNTGPALLGGGAPFYSVYECKDG 240
Query: 230 RFMAVGALESQFYAQLLAGL-----GMTEE--ELPQHEVETGRAKLTEKFKEKTQAEWCE 282
F++V LE +F+A L G +E ++ E R L + FK +T+ EW
Sbjct: 241 GFVSVACLEPRFFAAFLRTFKEHCPGDFDEASQMDLERWEELRRYLRDGFKSRTRDEWAR 300
Query: 283 IFDN-TDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
F++ DACV PVL+ S+A + + AP PRL+ TP T+
Sbjct: 301 TFEHEKDACVFPVLTPSEAAQRSGDAKSQTV----------APHPRLTGTP-TALPAFAT 349
Query: 342 PAPGVHTREVLRHFGYSDANIEELIREDVIEETIEM 377
PG+H+REVL FG+ I EL V+ E E+
Sbjct: 350 LTPGLHSREVLSEFGFDSTRIAELFAAGVVAEHSEV 385
>gi|124383527|ref|YP_001027798.1| amacr protein [Burkholderia mallei NCTC 10229]
gi|124291547|gb|ABN00816.1| amacr protein [Burkholderia mallei NCTC 10229]
Length = 431
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 211/374 (56%), Gaps = 15/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 58 LHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRDGDPLDLGRRAIFNRGKRSLAL 117
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 118 DLKQPEAVGAVLRLVEHADALIEGMRPGVMERLGLGPDACFARNPKLVYGRMTGWGQDGP 177
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 178 LAHAAGHDINYIGLSGALWYAGQPGDAPFAPPTLVGDLGGGALYLAMGVLAGIVDARLRG 237
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQ++D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 238 KGQIVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGYVSVGA 296
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA L+ LG+ +++ ++ + R +L E F + +A W E+ + TDAC
Sbjct: 297 LEPQFYALLVDKLGLADDDDFRNPYDASRWPRLRERLAEIFASRPRAHWVELMEGTDACF 356
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A SHPH RG + R G++ APAPR S +P P G + +
Sbjct: 357 APVLSPAEAQSHPHLAARGVYA-QRDGILQAAPAPRFSGSPNAQPGAV--PKRGADSAAI 413
Query: 352 LRHFGYSDANIEEL 365
LR G+++ I L
Sbjct: 414 LREAGFAEDEIAAL 427
>gi|443894635|dbj|GAC71982.1| predicted L-carnitine dehydratase, partial [Pseudozyma antarctica
T-34]
Length = 373
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 208/356 (58%), Gaps = 25/356 (7%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
+ L G+ V+EF+GLAP PF GM+L +FGA VIRIDK A D++ GK+S ++ K
Sbjct: 19 LPLSGVKVVEFSGLAPGPFVGMVLADFGADVIRIDKT-ATGLNPDSLCRGKRSFAVSPKS 77
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPR-LIYARLSGYGQDGPYSS 119
A G +++ L +DV+++PFR GV+E+L LGP K + LI+ARL+G+ + GPY+
Sbjct: 78 ADGHALISQLVRSADVVIDPFRPGVLERLGLGPQDFDKEIKKGLIFARLTGFQRTGPYAQ 137
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHDINY+ LSG+LS+LG P PP NL DF GG ++C LGI++AL ER++S +GQ
Sbjct: 138 MAGHDINYIALSGVLSMLGQAGGKPQPPSNLLGDFAGGSMICLLGILLALVERARSSQGQ 197
Query: 180 VIDCNMVEGSAYLGSW--LTRTQDTFLW--------DKPRGENLLDGGAHFYDTYETKDG 229
V++ +MV G+ Y+ S+ L+ W D+ RG N LDGGA +Y Y K+G
Sbjct: 198 VVEADMVTGARYVSSFVLLSSYLSHPSWGAIHADGTDETRGSNTLDGGAPWYGVYACKEG 257
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEELP----------QHEVETG---RAKLTEKFKEKT 276
+M+VGA+E FY +LL L P QH+ ET R F +
Sbjct: 258 GYMSVGAIEPHFYKELLDILRKVVPTAPDGTQHPSASTQHDRETWPELRRYFEAIFAQLP 317
Query: 277 QAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
++EW F TDAC PVL+ +A + + V PAPAPRL+RTP
Sbjct: 318 RSEWECHFVRTDACTVPVLTRDEAALSGVLPAASAESVSDGNPVIPAPAPRLTRTP 373
>gi|254186602|ref|ZP_04893119.1| CAIB/BAIF family protein [Burkholderia pseudomallei Pasteur 52237]
gi|157934287|gb|EDO89957.1| CAIB/BAIF family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 431
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 211/374 (56%), Gaps = 15/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 58 LHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRDGDPLDLGRRAIFNRGKRSLAL 117
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 118 DLKQPEAVGAVLRLVEHADALIEGMRPGVMERLGLGPDTCFARNPKLVYGRMTGWGQDGP 177
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 178 LAHAAGHDINYIGLSGALWYAGQPGDAPFAPPTLVGDLGGGALYLAMGVLAGIVDARLRG 237
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQ++D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 238 KGQIVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGYVSVGA 296
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA L+ LG+ +++ ++ + R +L E F + +A W E+ + TDAC
Sbjct: 297 LEPQFYALLVDKLGLADDDDFRNPYDASRWPRLRERLAEIFASRPRAHWVELMEGTDACF 356
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A SHPH RG + R G++ APAPR S +P P G + +
Sbjct: 357 APVLSPAEAQSHPHLAARGVYA-QRDGILQAAPAPRFSGSPNAQPGAV--PKRGADSAAI 413
Query: 352 LRHFGYSDANIEEL 365
LR G+++ I L
Sbjct: 414 LREAGFAEDEIAAL 427
>gi|402078857|gb|EJT74122.1| hypothetical protein GGTG_07970 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 409
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/313 (46%), Positives = 200/313 (63%), Gaps = 16/313 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYG----KKSLCINL 58
L G+ VLEFAGLAP PF GM+L + GA+V+R+D+ K S+ ++L
Sbjct: 6 LAGLKVLEFAGLAPGPFAGMLLADAGASVLRVDRSSPDAAAAAPTADLLARRKASVAVDL 65
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPR-LIYARLSGYGQDGPY 117
K A+G+++++ LA +DV+++PFR GV+E+L LGPD L R LIYAR++G+ +DG Y
Sbjct: 66 KSARGVALVRELAASADVLIDPFRPGVLERLGLGPDDLRAQIDRGLIYARITGFRRDGRY 125
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK--- 174
+ MAGHDINYL +SG+L++LG + PTPP N+ ADF GGG GI++AL R+
Sbjct: 126 ADMAGHDINYLAVSGVLAMLGRAGQPPTPPWNVLADFAGGGAALFQGILLALAARNSKPA 185
Query: 175 -SGRGQVIDCNMVEGSAYLGSWLT-RTQDTFLWDKPRGENLLDGGAHFYDTYETKD-GRF 231
RGQV++ NMV+G+AYL S+ + L PRGENLLD G FYDTYET + GR+
Sbjct: 186 GGRRGQVVEANMVDGAAYLASFPRFALKIPHLGGAPRGENLLDSGCPFYDTYETAERGRY 245
Query: 232 MAVGALESQFYAQLLAGLGMTEE--ELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDN 286
+AVGALE QF+A LL GLG+ + E QH+ RA+ F+ + + W +FD
Sbjct: 246 VAVGALEPQFFAALLRGLGLEGKGWEARQHDRAAWPEMRAEFGRVFRTRGRDGWEAVFDG 305
Query: 287 TDACVTPVLSLSQ 299
TDAC TPVL +
Sbjct: 306 TDACCTPVLDFGE 318
>gi|349605569|gb|AEQ00766.1| Alpha-methylacyl-CoA racemase-like protein, partial [Equus
caballus]
Length = 237
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 162/233 (69%), Gaps = 8/233 (3%)
Query: 147 PCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWD 206
P NL ADFGGGGLMCALGI+MALFER++SG+GQVID NMVEG+AYL ++L +TQ+ LW+
Sbjct: 2 PLNLLADFGGGGLMCALGIMMALFERTRSGKGQVIDANMVEGTAYLSTFLWQTQEMGLWE 61
Query: 207 KPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-- 264
+PRG+N+LDGGA FY TY T D FMAVGA+E QFY L+ GLG+ EELP T
Sbjct: 62 QPRGQNMLDGGAPFYTTYRTADEEFMAVGAIEPQFYELLIKGLGLKSEELPNQMSITDWP 121
Query: 265 --RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAP 322
+ K + F +KT+AEWC IFD TDACVTPVLSL +A H HN RGSFI + V+P
Sbjct: 122 EMKKKFADIFAKKTKAEWCRIFDGTDACVTPVLSLEEAVQHGHNKERGSFITHGEQGVSP 181
Query: 323 APAPRLSRTPGTSKITEHNPAPGV-HTREVLRHFGYSDANIEELIREDVIEET 374
PAP LS TP I P V HT E+LR FG+S I++L + +IE +
Sbjct: 182 RPAPLLSNTPA---IPSSKRDPFVEHTEEILREFGFSQEEIDQLNSDKIIESS 231
>gi|403516742|ref|YP_006650875.1| CAIB/BAIF family protein [Burkholderia pseudomallei BPC006]
gi|403072386|gb|AFR13966.1| CAIB/BAIF family protein [Burkholderia pseudomallei BPC006]
Length = 374
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 211/374 (56%), Gaps = 15/374 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
+ GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 1 MHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRDGDPLDLGRRAIFNRGKRSLAL 60
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 61 DLKQPEAVGAVLRLVEHADALIEGMRPGVMERLGLGPDTCFARNPKLVYGRMTGWGQDGP 120
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 121 LAHAAGHDINYIGLSGALWYAGQPGDAPFAPPTLVGDLGGGALYLAMGVLAGIVDARLRG 180
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQ++D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 181 KGQIVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGYVSVGA 239
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA L+ LG+ +++ ++ + R +L E F + +A W E+ + TDAC
Sbjct: 240 LEPQFYALLVDKLGLADDDDFRNPYDASRWPRLRERLAEIFASRPRAHWVELMEGTDACF 299
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A SHPH RG + R G++ APAPR S +P P G + +
Sbjct: 300 APVLSPAEAQSHPHLAARGVYA-QRDGILQAAPAPRFSGSPNAQPGAV--PKRGADSAAI 356
Query: 352 LRHFGYSDANIEEL 365
LR G+++ I L
Sbjct: 357 LREAGFAEDEIAAL 370
>gi|209515556|ref|ZP_03264421.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. H160]
gi|209504023|gb|EEA04014.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. H160]
Length = 380
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 202/339 (59%), Gaps = 11/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L G+ ++E AG+ P P M+L + GATV+RI++ +P + + +K++ +
Sbjct: 4 LAGVRIIELAGIGPGPMAAMLLADLGATVLRIERRQPVKLGIERPLRYNLLLRNRKTIAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + + ++ L ++D ++E FR GV E+L LGP + NP+L Y R++G+GQ+GP
Sbjct: 64 DLKDPEAVELVLTLVERADALIEGFRPGVTERLGLGPQACLERNPKLAYGRITGWGQEGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ ++G+L+ +G ++ P+ P NL D+ GG L A+G++ A+ G
Sbjct: 124 LAQYAGHDLNYIAITGVLNAIGRCDQPPSIPLNLIGDYAGGSLYLAMGLLSAILHARNGG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+G+A L + Q +W RG N+ D G+HFYD YE DG+++ VG
Sbjct: 184 AGQVVDAAIVDGTANLATTFFGMQAAGIWRDGRGTNITDSGSHFYDVYECADGKWVTVGP 243
Query: 237 LESQFYAQLLAGLGMTEE----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +FY +LL L + + +L + RA KFK +T+ +W + ++TDAC
Sbjct: 244 IEDKFYLELLRLLDIDSQTLGAQLDANNWPAARALFALKFKSRTREQWVTLLEHTDACFA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVLS ++A H H RG+FI G+V PAPAPR S T
Sbjct: 304 PVLSWTEAPEHAHLKARGTFI-EVDGIVQPAPAPRFSAT 341
>gi|118463934|ref|YP_881113.1| Mcr protein [Mycobacterium avium 104]
gi|118165221|gb|ABK66118.1| Mcr protein [Mycobacterium avium 104]
Length = 302
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 182/280 (65%), Gaps = 5/280 (1%)
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + ++ L +++DV++E FR GV E+L LGP+V C +NP L+Y RL+G+GQ GP
Sbjct: 4 DLKDPADHAAVRRLIDRADVLIEGFRPGVTERLGLGPEVCCAANPGLVYLRLTGWGQGGP 63
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GL+G+L +G ++ P PP NL D+GGG + +G++ AL ER SG
Sbjct: 64 RALQAGHDINYIGLTGLLHPIGPASQPPVPPLNLVGDYGGGSMPAVIGVLAALIERQTSG 123
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQVID +V G+A L + + W RG N+ DG A FY TYE DGR++AVGA
Sbjct: 124 RGQVIDAAIVNGAAQLAQAIWSMRADGRWSDDRGANIFDGSAPFYRTYECADGRYVAVGA 183
Query: 237 LESQFYAQLLAGLGMTEEEL-PQHEVE---TGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE +F+A++LA L + E + PQ + A L+EKF ++++ EW +F NTDACVT
Sbjct: 184 LEPEFFAEMLAILDLDPEAVGPQRDKSRWPAMHALLSEKFAQRSRDEWSAVFANTDACVT 243
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
PVLS+++A + H R FI GV PAPAPR SRTP
Sbjct: 244 PVLSMAEAATDAHLTERCVFI-EIDGVTQPAPAPRFSRTP 282
>gi|159037863|ref|YP_001537116.1| L-carnitine dehydratase/bile acid-inducible protein F [Salinispora
arenicola CNS-205]
gi|157916698|gb|ABV98125.1| L-carnitine dehydratase/bile acid-inducible protein F [Salinispora
arenicola CNS-205]
Length = 388
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 213/375 (56%), Gaps = 15/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFV-----QDTVGYGKKSLCI 56
L G+ V+E AG+ P PF M+L + GA VIR+D+ P D + G++S+ +
Sbjct: 10 LAGVRVIELAGIGPGPFAAMMLADLGAEVIRVDRAADVDPAAFGSPHPDLLNRGRRSIGV 69
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G V L +DV++E FR GV E+L LGP NP L+Y R++G+GQ GP
Sbjct: 70 DLKTPQGRDVALALTAGADVLIEGFRPGVTERLGLGPADCHAVNPNLVYGRMTGWGQHGP 129
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDI YL L+G L +G P PP NL DFGGGG++ ALG++ AL+
Sbjct: 130 AAQDAGHDITYLALTGALHGIGRAGERPVPPLNLLGDFGGGGMLLALGLISALYAVRGGA 189
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+G + L + + + +W PRG NLLDGGA FYD+YE DG+ +AVGA
Sbjct: 190 TGQVVDAAIVDGVSVLSTQVHALRQLGMWQDPRGVNLLDGGAPFYDSYECADGKHLAVGA 249
Query: 237 LESQFYAQLLAGLGMT-EEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
LE +FYA+L+ G E+ + R F+ + + EW + +DAC
Sbjct: 250 LEPRFYAELVRRTGFPLPEDTALDRTDPANWPALRQAWARLFRTRARDEWAALLAGSDAC 309
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
V PVL ++A +HPH R +F+ + GV PAPAPR S TP + + P PG HT E
Sbjct: 310 VAPVLDWAEAPAHPHLTARDTFV-DHHGVTQPAPAPRFSGTP--TGLHRPPPHPGEHTDE 366
Query: 351 VLRHFGYSDANIEEL 365
+L G+ A I +L
Sbjct: 367 LLAEAGFGAARIADL 381
>gi|167834909|ref|ZP_02461792.1| CAIB/BAIF family protein [Burkholderia thailandensis MSMB43]
gi|424901651|ref|ZP_18325167.1| hypothetical protein A33K_13005 [Burkholderia thailandensis MSMB43]
gi|390932026|gb|EIP89426.1| hypothetical protein A33K_13005 [Burkholderia thailandensis MSMB43]
Length = 377
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 208/375 (55%), Gaps = 15/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 4 LHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRDGDPLDLGRHAIFNRGKRSLAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + LA +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 64 DLKQPEAIDAVLRLAEGADALIEGMRPGVMERLGLGPDACFARNPKLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 124 LAHAAGHDINYIGLSGALWYAGQPGDAPLAPPTLVGDLGGGALYLAIGVLAGIVDARLRG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+GSA L + L RG+ LLD G H+Y +Y G ++VGA
Sbjct: 184 QGQVVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGHVSVGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA L+ L + +E +H + RA+L E F + +A W E+ + TD C
Sbjct: 243 LEPQFYALLVDKLDLAGDEDFRHPYDASRWPRLRARLAEIFASRPRAHWVELMEGTDVCF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS +A SHPH RG + R GV+ APAPR S +P P G + +
Sbjct: 303 APVLSPVEAKSHPHLAARGVYA-ERDGVLQAAPAPRFSGSPNARPGAV--PRRGADSAAI 359
Query: 352 LRHFGYSDANIEELI 366
LR G+++ I +
Sbjct: 360 LREAGFAEDEIAAFV 374
>gi|256371406|ref|YP_003109230.1| L-carnitine dehydratase/bile acid-inducible protein F
[Acidimicrobium ferrooxidans DSM 10331]
gi|256007990|gb|ACU53557.1| L-carnitine dehydratase/bile acid-inducible protein F
[Acidimicrobium ferrooxidans DSM 10331]
Length = 373
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 196/347 (56%), Gaps = 11/347 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VLE G+ P PF GM+L + GATV+RI+ D + GK + I+ K +
Sbjct: 5 LAGVRVLELGGIGPVPFAGMVLGDLGATVVRIEPPSGAGLGADALARGKHVIRIDAKDPE 64
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G ++++ LA+++DV +E FR GV+E+L +GP LC +N RLIY R +G+GQ GP + AG
Sbjct: 65 GRALIRELASRADVFVEGFRPGVVERLGIGPGELCAANDRLIYVRTTGFGQSGPLAERAG 124
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDI YL + G L G + P PP NL ADFG GG++ +G + L ER +SGRG+V+D
Sbjct: 125 HDITYLAIGGALGATGSADAPPLPPLNLLADFGSGGMLSVVGALAGLIERERSGRGRVVD 184
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
MV+G + + W R NLLDGGA FY TY DGR++AVGALE QF+
Sbjct: 185 AAMVDGVLLTETMVLAMMREGAWRPMREANLLDGGAPFYRTYRCADGRWIAVGALEPQFF 244
Query: 243 AQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
LL LG+ E P + E R + L + F +A W E F DACV PVL L
Sbjct: 245 HTLLRELGLIERFDPAAQYERARWGELASLLADAFGSAPRAVWEERFAGLDACVAPVLGL 304
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP 344
+ S P +V R SF+ G + PAPAPR + E P P
Sbjct: 305 DELASAPQHVERRSFV-EVDGHLEPAPAPRFD-----GEAVESRPGP 345
>gi|307726729|ref|YP_003909942.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1003]
gi|307587254|gb|ADN60651.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1003]
Length = 370
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 209/367 (56%), Gaps = 22/367 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD-----TVGYGKKSLCIN 57
L G+ VLE AG+ P PFCGM+L + GA V+ +D+ A+P D GK+S+ ++
Sbjct: 9 LAGLKVLEIAGIGPGPFCGMLLADLGADVVVVDRAEAEPGALDLGRTQIANRGKRSVSVD 68
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G+ + L Q D ++E R GVME+L LGP V + NPRL+Y R++G+GQ GP
Sbjct: 69 LKTPEGVEAVLRLVAQCDALIEGMRPGVMERLGLGPHVCLQRNPRLVYGRMTGWGQHGPL 128
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ LSG L G P P +L D GGG + A+G++ + +G
Sbjct: 129 AHAAGHDLNYIALSGALWYAGQPGEAPITPPSLVGDVGGGSMYLAVGLLAGIMNARATGT 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQVID +V+GSA++ S L Q + RG++LLD G H+Y+TY+ DG +++VG+L
Sbjct: 189 GQVIDAAIVDGSAHMTSLLLALQASGHMHAQRGQSLLD-GPHWYNTYQCADGAYISVGSL 247
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-------RAKLTEKFKEKTQAEWCEIFDNTDAC 290
E +FY +L LG++ + P+ + R +L F +++ EWC + + TDAC
Sbjct: 248 EPKFYRELREKLGLSSD--PEFDKPYDPCVWPRLRERLAALFASRSRDEWCSLLEGTDAC 305
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHT 348
PVL+ +A HPH RG ++ GV+ +PAPR S TP P P G H
Sbjct: 306 FAPVLTPDEAADHPHMRARGVYL-REDGVLQVSPAPRFSATPAGPP----GPIPRRGEHN 360
Query: 349 REVLRHF 355
V+R +
Sbjct: 361 EAVVRDW 367
>gi|187919811|ref|YP_001888842.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phytofirmans PsJN]
gi|187718249|gb|ACD19472.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
phytofirmans PsJN]
Length = 383
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 206/362 (56%), Gaps = 18/362 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG-----YGKKSLCIN 57
L G+ VLE AG+ P PFC M+ + GA V+ +D+ A P D G GK+S+ ++
Sbjct: 9 LAGLKVLEIAGIGPGPFCAMLFADLGADVVVVDRIEAGPDALDLGGTQLANRGKRSVAVD 68
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G+ + L QSD ++E R GVME+L LGPD+ N RLIY R++G+GQDGP
Sbjct: 69 LKTVEGVETVLRLIEQSDALIEGMRPGVMERLGLGPDICLGRNSRLIYGRMTGWGQDGPL 128
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ LSG L G P P +L D GGG + A+G++ + +G
Sbjct: 129 AHAAGHDLNYIALSGALWYAGQPGEAPVTPPSLVGDVGGGAMYLAVGLLAGIMNARATGV 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+GSA++ + L Q + RG++LLD G H+Y+TY +G F++VG+L
Sbjct: 189 GQVVDAAIVDGSAHMTTLLLALQASGQMRSERGQSLLD-GPHWYNTYRCAEGGFISVGSL 247
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E +FY +L LG+ + L + R + F E+++ EWC + + TDAC
Sbjct: 248 EPKFYRELREKLGLGADPLFDRPYDASSWPQLRERFATLFLERSRDEWCALLEGTDACFA 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHTRE 350
PVLS +A +HPH RG + + GV+ APAPR S TP + P P G H +
Sbjct: 308 PVLSPDEAATHPHMHARGVYTRDD-GVLQAAPAPRFSATPASRP----GPIPRRGEHQDD 362
Query: 351 VL 352
VL
Sbjct: 363 VL 364
>gi|167579318|ref|ZP_02372192.1| alpha-methylacyl-CoA racemase [Burkholderia thailandensis TXDOH]
Length = 377
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 209/375 (55%), Gaps = 15/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 4 LHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRAGDPLDLGRRAIFNRGKRSLAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 64 DLKQPEAVDAVLRLVEHADALIEGMRPGVMERLGLGPDACFARNPKLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 124 LAHAAGHDINYIGLSGALWYAGQPGDAPFAPPTLVGDLGGGALYLAMGVLAGIVDARLRG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 184 KGQVVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGYVSVGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE FYA L+ LG+ +++ ++ + R +L E F + +A W E+ + TD C
Sbjct: 243 LEPPFYALLVDKLGLADDDDFRNPYDASRWPRLRGRLAEIFASRPRAHWVELMEGTDVCF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A SHPH RG + R GV+ APAPR S +P P G + +
Sbjct: 303 APVLSPAEAKSHPHLAARGVYA-ERDGVLQAAPAPRFSGSPNAQPGAV--PKRGADSAAI 359
Query: 352 LRHFGYSDANIEELI 366
LR G++ I L+
Sbjct: 360 LREAGFAPDEIAALV 374
>gi|419965604|ref|ZP_14481547.1| fatty acid-CoA racemase [Rhodococcus opacus M213]
gi|414569088|gb|EKT79838.1| fatty acid-CoA racemase [Rhodococcus opacus M213]
Length = 387
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 198/348 (56%), Gaps = 16/348 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQ--------DTVGYGK 51
L G VL +G+ P P+ M+L + GA V+R+ + A+ Q D G
Sbjct: 5 LDGTRVLVLSGMGPVPYVSMLLADMGAHVVRVVRPTHRAARALAQTDGLRDQHDVANRGI 64
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
++ ++LK ++G+ + LA +DV +E +R GV E+L LGP+V+ NP ++YARL+GY
Sbjct: 65 ETTALDLKDSRGVDTVLRLAAAADVFIEGYRPGVAERLGLGPEVVLGHNPAIVYARLTGY 124
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQ GP + AGHDINY+ SG L L R P PP NL D+ GGG + A GIV AL E
Sbjct: 125 GQSGPRAQEAGHDINYVAQSGALHALARRGERPHPPINLLGDYAGGGAIGAFGIVCALLE 184
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
+KSG GQV+D MV+G A L + L + L+ G N +D GA FYDTY DGR+
Sbjct: 185 ATKSGTGQVVDVAMVDGVALLTAKLQGLRAARLFSDEPGTNWIDSGAPFYDTYRCADGRY 244
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNT 287
+AVGALE FY + L GLG+ P +L E +T+ EW I+ T
Sbjct: 245 LAVGALEPDFYREFLTGLGVETAHWPDQNDRERWPQLREFIAAAIAGRTRDEWKSIYAGT 304
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
DACV+PVL+ +A PHN RG + GV+ PAPAPRLSRTP +
Sbjct: 305 DACVSPVLTFDEAAEDPHNAERGLY-QRVGGVLQPAPAPRLSRTPART 351
>gi|83718526|ref|YP_440624.1| alpha-methylacyl-CoA racemase [Burkholderia thailandensis E264]
gi|167617421|ref|ZP_02386052.1| alpha-methylacyl-CoA racemase [Burkholderia thailandensis Bt4]
gi|83652351|gb|ABC36414.1| alpha-methylacyl-CoA racemase [Burkholderia thailandensis E264]
Length = 377
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 209/375 (55%), Gaps = 15/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AG+ PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 4 LHGIRIVEIAGIGPAPFCGMLLADMGADVILVERTAGRAGDPLDLGRRAIFNRGKRSLAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 64 DLKQPEAVDAVLRLVEHADALIEGMRPGVMERLGLGPDACFARNPKLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 124 LAHAAGHDINYIGLSGALWYAGQPGDAPFAPPTLVGDLGGGALYLAMGVLAGIVDARLRG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 184 KGQVVDAAIVDGSANLMNLLLSIHAAGFMPMARGQGLLD-GPHWYGSYRCACGGYVSVGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE FYA L+ LG+ +++ ++ + R +L E F + +A W E+ + TD C
Sbjct: 243 LEPPFYALLVDKLGLADDDDFRNPYDASRWPRLRERLAEIFASRPRAHWVELMEGTDVCF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS ++A SHPH RG + R GV+ APAPR S +P P G + +
Sbjct: 303 APVLSPAEAKSHPHLAARGVYA-ERDGVLQAAPAPRFSGSPNAQPGAV--PKRGADSAAI 359
Query: 352 LRHFGYSDANIEELI 366
LR G++ I L+
Sbjct: 360 LREAGFAPDEIAALV 374
>gi|94311472|ref|YP_584682.1| alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
gi|93355324|gb|ABF09413.1| alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
Length = 373
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 208/373 (55%), Gaps = 24/373 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA----QPFVQDTVGYGKKSLCINL 58
L GI ++E G+ P PFC M L + GA VI I++ + P + GK+S+ +L
Sbjct: 2 LSGIRIVEICGIGPGPFCAMHLADLGADVIAIERTASGESGAPADGSVLNRGKRSVVADL 61
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A+G ++ L +D ++E R GVME+L LGPDVL + NPRL+Y R++G+GQ GP +
Sbjct: 62 KTAEGRELVLRLIEDADALIEGMRPGVMERLGLGPDVLQQRNPRLVYGRMTGWGQYGPLA 121
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD NY+ LSG L G + P+ L D GGG L A+G++ + +G+G
Sbjct: 122 QAAGHDNNYISLSGALYYNGAPSEPPSSAITLVGDVGGGALYLAIGLLSGILNARATGKG 181
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D + +GSA++ L T+ L RG+N+ D +HF+ TY DG F+ +GALE
Sbjct: 182 TVVDAAITDGSAHMLQLLLATRKKGLVTGVRGQNVHD-SSHFFATYRCADGHFVTLGALE 240
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAK-------LTEKFKEKTQAEWCEIFDNTDACV 291
QFYA LL LG+ E+ P+ + R + E F +T+AEWC + +NTD C
Sbjct: 241 PQFYALLLQKLGLAED--PRFARQWDRQRWPELHRHFAELFASRTRAEWCALLENTDVCF 298
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL---SRTPGTSKITEHNPAPGVHT 348
PVLS +A +HPHNV RG + + + A APAPR +R PG P PG HT
Sbjct: 299 GPVLSPEEAAAHPHNVARGVYFESDRQLQA-APAPRFDGQARRPGPI------PTPGQHT 351
Query: 349 REVLRHFGYSDAN 361
E+ DA+
Sbjct: 352 EEIAAILAGKDAH 364
>gi|358455992|ref|ZP_09166217.1| Alpha-methylacyl-CoA racemase [Frankia sp. CN3]
gi|357080643|gb|EHI90077.1| Alpha-methylacyl-CoA racemase [Frankia sp. CN3]
Length = 374
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 223/372 (59%), Gaps = 15/372 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH---GAQPFVQDTVGYGKKSLCINL 58
AL+G V+E AG+ P PF M+L++ GA V+R+D+ G + + D G++S+ I+L
Sbjct: 4 ALRGFRVVELAGIGPGPFAAMMLSDMGAEVLRVDRADAVGTEAPLWDVNARGRRSVGIDL 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + L ++DV++E FR GV E+L LGPD PRL+Y R++G+GQ+GPY+
Sbjct: 64 KHPDGREAVLRLVERADVLIEGFRPGVTERLGLGPDDCLARQPRLVYGRMTGWGQEGPYA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
G DINY+ L+G L ++G P PP N+ DFGGGGL+ A GIV AL E SGRG
Sbjct: 124 QAPGRDINYVALAGTLGMIGPAGAPPVPPLNVVGDFGGGGLLLAFGIVCALLEAGGSGRG 183
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D MV+G+A L + + W + RG NLLDGGA FYD YET DGR+++VGA++
Sbjct: 184 QVVDAAMVDGAALLAGMIHGLRAAGDWGE-RGTNLLDGGAWFYDAYETADGRYVSVGAID 242
Query: 239 SQFYAQLLAGLGMTEEELPQHEVET---GRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+ QL G+ + P+ + + +A+L + +T+ EWC + + TDAC PVL
Sbjct: 243 PRARRQLAELTGV--DPGPKDDRSSWPATKARLAAVIRTRTRDEWCAVLEGTDACFAPVL 300
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+A +HPHN HR +F GVV PAPAPR SRTP P HT E L +
Sbjct: 301 DPDEAPAHPHNRHRATFT-EVGGVVQPAPAPRFSRTPPAVAGPPPAPGQ--HTEEALADW 357
Query: 356 GYSDANIEELIR 367
G+S +EE+ R
Sbjct: 358 GFS---VEEVAR 366
>gi|33593878|ref|NP_881522.1| racemase [Bordetella pertussis Tohama I]
gi|384205183|ref|YP_005590922.1| putative racemase [Bordetella pertussis CS]
gi|33563951|emb|CAE43213.1| putative racemase [Bordetella pertussis Tohama I]
gi|332383297|gb|AEE68144.1| putative racemase [Bordetella pertussis CS]
Length = 396
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 199/336 (59%), Gaps = 11/336 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L+G V+E AG+ PAP M+L + GA V+RI++ + +P + + + +
Sbjct: 27 LQGTRVVELAGIGPAPMACMLLADLGAEVVRIERAESVELGVVRPARYNLLMRNRCLVAA 86
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + +L ++DV++E FR GV E+L LGP NPRL+Y R++G+GQ GP
Sbjct: 87 DLKQPAMVEQALDLVARADVLVEGFRPGVAERLGLGPQACQARNPRLVYGRMTGWGQSGP 146
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+GI+ +G + P+ P L D GG L ALG+V AL ERS+SG
Sbjct: 147 LAQAAGHDLNYVALTGIIHAIGRAGQPPSIPLALTGDMAGGALYLALGVVAALLERSRSG 206
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVID +V+G+A L + LW RG N+LD GA FYD YE DG +++VG
Sbjct: 207 LGQVIDAAIVDGAASLATVFYGLCAAGLWQDARGTNILDSGAPFYDVYECADGAWISVGP 266
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG--RAKL--TEKFKEKTQAEWCEIFDNTDACVT 292
+E++FYAQLL L + +++ + RAK+ +F+ +T+ WC + + +D C
Sbjct: 267 IEARFYAQLLEKLELRAQDVGARDDRAAWPRAKMAIASRFRTRTRDAWCALLEGSDVCFA 326
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
PVLS +A +H H RG+F+ GVV PAPAPR
Sbjct: 327 PVLSFEEAPAHAHLKARGTFV-EVDGVVQPAPAPRF 361
>gi|377567634|ref|ZP_09796842.1| alpha-methylacyl-CoA racemase [Gordonia terrae NBRC 100016]
gi|377535174|dbj|GAB42007.1| alpha-methylacyl-CoA racemase [Gordonia terrae NBRC 100016]
Length = 364
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 198/338 (58%), Gaps = 11/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDTVGYGKKSLC 55
L G+ V+E GL P P M+L + GA VIRI + G P + ++S+
Sbjct: 5 LAGVRVVEMPGLGPTPHACMLLADLGADVIRIRRPGPDLPGPDGIPNADAGLYRSRRSVD 64
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++K L+ ++ L ++D+++E FR GVME+L LGP++ C P+LIYAR++G+GQ G
Sbjct: 65 ADVKDPTDLAGIRELVLRADILVEGFRPGVMERLGLGPEI-CSDAPQLIYARMTGWGQSG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
++ AGHDINYL ++G+L +G P PP +L DFGGG ++ +G++ AL +R+++
Sbjct: 124 DRAATAGHDINYLAVTGVLEAMGPAGSPPVPPLSLVGDFGGGSMLLVVGVLAALHDRTRT 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQVID MV+G+ L + + W NLLDG A FY TY DGRF+AVG
Sbjct: 184 GRGQVIDAAMVDGAGLLAALQWSWKTAGRWGSRDQGNLLDGSAPFYATYRCADGRFVAVG 243
Query: 236 ALESQFYAQLLAGLGMTE--EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
ALE +F+ L+ LG+ + + + A L +F +T+ EW +F + DACVTP
Sbjct: 244 ALEEKFWRNLVDTLGVGDLPDRWDRASWPVIGAALQARFGTRTRDEWGSVFADVDACVTP 303
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
VL +A P V RGSF+ + PAPAPR SRT
Sbjct: 304 VLDFDEAAVDPVAVQRGSFV-RVDDAITPAPAPRFSRT 340
>gi|378726059|gb|EHY52518.1| alpha-methylacyl-CoA racemase [Exophiala dermatitidis NIH/UT8656]
Length = 419
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/300 (45%), Positives = 185/300 (61%), Gaps = 21/300 (7%)
Query: 19 FCGMILNEFGATVIRIDKHGAQPF--VQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDV 76
+C +IL ++GA V+R+D+ PF +DT+ K+S+ ++LK A+ L +DV
Sbjct: 53 YCSLILADYGADVVRVDR-PVSPFGPPRDTLCRHKRSVIVDLKNAQSRHAFLELVKVADV 111
Query: 77 ILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSL 136
+++P+R GVM +L LGP L K NP LIYA L G+ DG Y + AGHDINYL SG+L L
Sbjct: 112 LIDPYRPGVMSRLGLGPSDLRKINPDLIYAHLHGFRPDGIYGARAGHDINYLAASGVLGL 171
Query: 137 LGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS------------GRGQVIDCN 184
G + P+PP N+ DF GGGL+C +GI+MAL R + G GQV+ N
Sbjct: 172 FGRKGEVPSPPANILGDFAGGGLVCVVGILMALMHRIRQKTTTAGGSGSGSGSGQVVTAN 231
Query: 185 MVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQ 244
MV+G+AYL ++ + WD+PRGENLLDG A FY+ Y TKD RF+AVGA E QFY
Sbjct: 232 MVDGTAYLATFARQQLGHENWDRPRGENLLDGAAPFYEVYATKDDRFVAVGAQEPQFYKA 291
Query: 245 LLAGLGMTEEELP-----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
LL GLG+ ++P QH +T + F+ +T EW E+FD+ DACVTPVL + +
Sbjct: 292 LLDGLGLEASKMPPQWERQHWPDTKKL-FASLFRGRTMREWREVFDSVDACVTPVLDMDE 350
>gi|158316343|ref|YP_001508851.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
gi|158111748|gb|ABW13945.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EAN1pec]
Length = 379
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 213/381 (55%), Gaps = 17/381 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV------QDTVGYGKKSLC 55
AL +TV+ + L P PF M+L + GA VIRID+ V D G++ +
Sbjct: 4 ALGDVTVVCLSALGPVPFATMLLADLGARVIRIDRADRPGGVTGLRLEDDPRTRGQRGIG 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++++ G SV+ L +DV LE R GV E+L LGP L NPRL+Y R +G+GQ G
Sbjct: 64 VDVRHPSGRSVVLRLVETADVFLEGMRPGVAERLGLGPAELLAVNPRLVYGRATGWGQSG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHDINY GL+G L G P PP NL ADF GGG ALG++ AL R+ +
Sbjct: 124 PRAQQAGHDINYAGLAGGLYPTGPAELPPLPPLNLLADFAGGGSYLALGVLAALHHRTGT 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GRGQV+D MV+G A L + + LW RG+NLLDGGA FY TY T D F+AVG
Sbjct: 184 GRGQVVDAAMVDGVANLTAMMHGMLAAGLWSDRRGDNLLDGGAPFYRTYRTADDGFVAVG 243
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETGRAK---LTEKFKEKTQAEWCEIFDNTDACVT 292
ALE QFY LL LG+ PQH+ T + L + F +T+ EW ++FD DACVT
Sbjct: 244 ALEPQFYRLLLENLGLDPARWPQHDRSTWPEQERVLGDLFAARTRDEWTKLFDGVDACVT 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG--VHTRE 350
PVLSL++A + R +F+ GV PAPAPRLS +P + P G H+ E
Sbjct: 304 PVLSLAEAAASAELRERATFV-EWDGVAQPAPAPRLSASPAVER-----PRSGWCSHSAE 357
Query: 351 VLRHFGYSDANIEELIREDVI 371
+L G ++ L VI
Sbjct: 358 ILTELGLTETERAALRDAGVI 378
>gi|392942584|ref|ZP_10308226.1| putative acyl-CoA transferase/carnitine dehydratase [Frankia sp.
QA3]
gi|392285878|gb|EIV91902.1| putative acyl-CoA transferase/carnitine dehydratase [Frankia sp.
QA3]
Length = 365
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/350 (41%), Positives = 202/350 (57%), Gaps = 11/350 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF---VQDTVGYGKKSLCINLK 59
L G+ VLE AGL M L + GA V+R+D+ G P+ D V G++ + ++L+
Sbjct: 8 LAGLRVLEIAGLGQVAMAAMALADLGADVVRLDRPGGGPYPATAGDPVLRGRRHVTVDLR 67
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G +LA +DV+LE R GV E+L +GP NPRL+YAR++G+GQ GP +
Sbjct: 68 SPQGRDTALDLAAAADVVLEAMRPGVAERLGIGPQDCLARNPRLVYARITGWGQQGPLAQ 127
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ L+G+L LG P PP NL F GG +M +G++ AL E +SGRGQ
Sbjct: 128 QAGHDVNYIALTGVLGALGRAGERPLPPLNLLG-FAGGAMMGVVGVLAALHEVERSGRGQ 186
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+G + L + + W+ R NL DG A F+DTY DGRF+AV A+E
Sbjct: 187 VVDAAIVDGVSLLAQMVWSFRGQGRWNDARESNLFDGHAPFFDTYTCADGRFVAVAAMEP 246
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA LL GLG+ + +LP + E G RA+ TE F +T+ EW +F + DAC+TPVL
Sbjct: 247 AFYANLLRGLGLADADLPPQDDEGGWPVLRARFTEAFARRTRDEWVAVFADLDACLTPVL 306
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKI--TEHNPA 343
+ + +HP RG+ + G+ AP PR S TP TE PA
Sbjct: 307 TFDEVAAHPQIAARGTVV-EVDGITQAAPTPRFSATPAPPPRPHTEAEPA 355
>gi|398947873|ref|ZP_10672474.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
gi|398161458|gb|EJM49690.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
Length = 367
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 211/370 (57%), Gaps = 28/370 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG------YGKKSLCI 56
L G+ VLE AGL P PFCGM+L + GA V+ +++ GAQ + +G GK+S+ +
Sbjct: 8 LSGLKVLEIAGLGPGPFCGMLLADLGADVVLVER-GAQTADEIDMGAGAIYKRGKRSVGV 66
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G+ + +L + D ++E R GVME+L LGPDV NPRL+Y R++G+GQDGP
Sbjct: 67 DLKSPEGIQTVLSLVERCDALIEGMRPGVMERLGLGPDVCLARNPRLVYGRMTGWGQDGP 126
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+G L G + P P +L D GGG L A+G++ + +G
Sbjct: 127 LAQAAGHDMNYIALAGALWYAGQPGQAPIAPPSLVGDVGGGALYLAIGLLAGVMNARTTG 186
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQVID +V+G A++ + L + RG++ LD G H+Y+TY DG++++VG+
Sbjct: 187 KGQVIDAAIVDGCAHMQNLLLSAKAGGQLPNERGQSGLD-GPHWYNTYLCADGKYVSVGS 245
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG---------RAKLTEKFKEKTQAEWCEIFDNT 287
LE +FYA L LG+ ++ E G R K F +T+ +WCEI + T
Sbjct: 246 LEPRFYALLREKLGLGDDP----ETANGYNPKTWPQLREKFASIFARRTREQWCEILEGT 301
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--G 345
DAC PVL+L +A HPH R F G++ PAPR S TP P P G
Sbjct: 302 DACFAPVLNLDEAADHPHLQARKVF-DRENGMLQANPAPRFSGTPAGRP----GPLPVRG 356
Query: 346 VHTREVLRHF 355
HT +VLR +
Sbjct: 357 EHTEQVLRDW 366
>gi|311107053|ref|YP_003979906.1| CoA-transferase [Achromobacter xylosoxidans A8]
gi|310761742|gb|ADP17191.1| CoA-transferase family III family protein 28 [Achromobacter
xylosoxidans A8]
Length = 365
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 199/357 (55%), Gaps = 14/357 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ----DTVGYGKKSLCINL 58
L GI V+E GL P PFC M L + GA VI +++ A P + + GK+++ ++L
Sbjct: 2 LSGIRVVEICGLGPGPFCAMHLADLGADVIAVER--ADPVRRADERQVINRGKRTVALDL 59
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A+G + LA Q+DV++E R GVME+L LGPD L NPRL+Y R++G+GQ GP +
Sbjct: 60 KSAQGRDTVLKLAEQADVLIEGMRPGVMERLGLGPDPLHTRNPRLVYGRMTGWGQTGPLA 119
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD NY+ LSG L G R P P D GGG L A+GI+ + + ++G G
Sbjct: 120 QAAGHDNNYIALSGALYYTGTRGEAPISPITALGDIGGGALYLAIGILAGVMKARETGLG 179
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D +V+GSA+L S + T+ L RGEN+ D +HF+ +Y KDG ++ +GALE
Sbjct: 180 TVVDAAIVDGSAHLLSLMLATKAKGLVTGRRGENVHD-SSHFFSSYCCKDGEYITLGALE 238
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QFYA LL L + + PQ E + R K F E+T+AEWC + + TD C V
Sbjct: 239 PQFYALLLRKLELDPVDFPQWERQRWPALRGKFAAIFVERTRAEWCALLEGTDVCFGAVF 298
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
S +A HPH RG + R G + APR G + P G HT EVL
Sbjct: 299 SPEEAARHPHMQARGVYF-ERDGRLEARAAPRFD---GVALPAGEVPTSGQHTAEVL 351
>gi|386288222|ref|ZP_10065380.1| L-carnitine dehydratase/bile acid-inducible protein F [gamma
proteobacterium BDW918]
gi|385278755|gb|EIF42709.1| L-carnitine dehydratase/bile acid-inducible protein F [gamma
proteobacterium BDW918]
Length = 364
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 201/363 (55%), Gaps = 17/363 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY--------GKKSL 54
L+GI V+E AG+ P P GM+L + GA VI +++ P G GKKS+
Sbjct: 4 LEGIKVIEIAGIGPCPITGMMLADLGAEVILVERAAENPNGAGVGGVIESAFFRRGKKSI 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK + ++ + L ++DV++E FR GVME+L LGP V + P LIY R++G+GQ
Sbjct: 64 ALDLKIPESINAVLRLVEEADVLIEGFRPGVMERLGLGPKVCLERRPALIYGRMTGWGQV 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHD+NYL +SG+L G P PP + D G G M +G++ AL
Sbjct: 124 GPLARSAGHDLNYLAISGVLHYGGLPGDTPYPPPTVLGDIGSGSNMLLIGVLSALLHAKA 183
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
+G GQVID + +G+AY + L + + GE G+H+ +TY DGR++ V
Sbjct: 184 TGEGQVIDAAICDGAAYNQTLLASVRAEGAISEEPGETFFRAGSHWCNTYACADGRYITV 243
Query: 235 GALESQFYAQLLA--GLGMTEEELPQHEVET---GRAKLTEKFKEKTQAEWCEIFDNTDA 289
ALE FY +L+A G G + QH+ +T R K+T F K QA WCE+ + TDA
Sbjct: 244 QALEPNFYRELIALCGFGDDPDFTRQHDPKTWPAARQKMTALFASKPQAHWCELLEGTDA 303
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
C PVL+L +A HPHN RG F+ + + P+PAPR S TP + P G H
Sbjct: 304 CFAPVLTLPEAAEHPHNRERGCFVLD-GEFLLPSPAPRFSLTPQEMGVI---PRLGQHNE 359
Query: 350 EVL 352
E+L
Sbjct: 360 EIL 362
>gi|163745205|ref|ZP_02152565.1| L-carnitine dehydratase/bile acid-inducible protein F [Oceanibulbus
indolifex HEL-45]
gi|161382023|gb|EDQ06432.1| L-carnitine dehydratase/bile acid-inducible protein F [Oceanibulbus
indolifex HEL-45]
Length = 367
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/361 (40%), Positives = 206/361 (57%), Gaps = 12/361 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L + V+EF+GL PAP G +L + GA VI +D+ A D GK+S+ +NLKK++
Sbjct: 10 LASLRVVEFSGLGPAPLAGQLLADLGADVITVDRKAAPADPSDINRRGKRSVVLNLKKSE 69
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPR-LIYARLSGYGQDGPYSSMA 121
G++ + L +DV++E FR GVME+L LGP+ S P LIY R++G+GQ GP++ A
Sbjct: 70 GIAAARALIASADVLIEGFRPGVMERLGLGPE----SCPEILIYGRMTGWGQTGPWAQTA 125
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL L+G L +G + P PP N+ AD+GGG + LGI+ A+ ER +G+GQV+
Sbjct: 126 GHDINYLALTGALHAMGSADAPPVPPLNMVADYGGGTMFLLLGILSAVIERGVTGKGQVV 185
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D MV+G + + W + R N LDG A FY Y DG+F+AVGALE QF
Sbjct: 186 DAAMVDGVPAMMGLIHGMLAQNKWTEERAANWLDGAAPFYRCYTCADGKFLAVGALEPQF 245
Query: 242 YAQLLAGLGMTEE-ELPQHEVETGRAKLTE---KFKEKTQAEWCEIFDNTDACVTPVLSL 297
YA LL L + E Q++ T A+ TE F +++ +W FD +DACV PVL
Sbjct: 246 YAILLDKLDLPAEYATTQNDTATWPARTTEFAAIFATRSRDDWAAHFDGSDACVAPVLRF 305
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
S+A HP RG+ + GV+ APR G ++ A G T VL+ G
Sbjct: 306 SEAPDHPQMAARGNVL-RVDGVLQSGHAPRFGA--GAPEMPSPPRAIGADTDAVLKELGV 362
Query: 358 S 358
+
Sbjct: 363 T 363
>gi|398866319|ref|ZP_10621817.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
gi|398241217|gb|EJN26874.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
Length = 367
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 210/370 (56%), Gaps = 28/370 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG------YGKKSLCI 56
L G+ VLE AGL P PFCGM+L + GA V+ +++ GAQ + +G GK+S+ +
Sbjct: 8 LSGLKVLEIAGLGPGPFCGMLLADLGADVVLVER-GAQTADEIDMGAGAIYKRGKRSVGV 66
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G+ + +L D ++E R GVME+L LGPDV NPRL+Y R++G+GQDGP
Sbjct: 67 DLKSPEGIQTVLSLVENCDALIEGMRPGVMERLGLGPDVCLTRNPRLVYGRMTGWGQDGP 126
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+G L G + P P +L D GGG L A+G++ + +G
Sbjct: 127 LAQAAGHDMNYIALAGALWYAGQPGQAPIAPPSLVGDVGGGALYLAIGLLAGVMNARTTG 186
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQ+ID +++G A++ + L + RG++ LD G H+Y+TY DG++++VG+
Sbjct: 187 KGQIIDAAIIDGCAHMQNLLLSAKAGGQLPNERGQSGLD-GPHWYNTYLCADGKYVSVGS 245
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG---------RAKLTEKFKEKTQAEWCEIFDNT 287
LE +FYA L LG+ ++ E G R K F +T+ +WCEI + T
Sbjct: 246 LEPRFYALLREKLGLGDDP----ETANGYNPKTWPQLREKFASIFARRTREQWCEILEGT 301
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--G 345
DAC PVL+L +A HPH R F G++ PAPR S TP P P G
Sbjct: 302 DACFAPVLNLDEAADHPHLQARKVFY-RENGMLQANPAPRFSGTPAGRP----GPLPVRG 356
Query: 346 VHTREVLRHF 355
HT +VLR +
Sbjct: 357 EHTDQVLRDW 366
>gi|386382622|ref|ZP_10068223.1| fatty acid-CoA racemase [Streptomyces tsukubaensis NRRL18488]
gi|385669912|gb|EIF93054.1| fatty acid-CoA racemase [Streptomyces tsukubaensis NRRL18488]
Length = 399
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 214/376 (56%), Gaps = 15/376 (3%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQDTVGYGKKSLCINLKKAK 62
+ ++E G+ P PF GMIL + GA V+R+D+ HG+ P + G++S+ +LK +
Sbjct: 28 VRIVELGGIGPGPFAGMILADLGADVVRVDRPAEHGS-PSRHPILHRGRRSVTADLKDPR 86
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G+ ++ L + +D ++E FR GV E+L LGP + NPRL+Y R++G+GQDGP + G
Sbjct: 87 GVGLVGKLIDGADALIEGFRPGVTERLGLGPGPCLERNPRLVYGRMTGWGQDGPLAQAPG 146
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ ++G L+ +G + +P P NL D GGGGL+ ALGI AL+ +GRGQV+D
Sbjct: 147 HDINYIAVAGALAQIGPADGDPVVPLNLFGDMGGGGLLLALGISAALYSARTTGRGQVVD 206
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M +G+A + L T W + RG NL DG A FY TY DG MAVG +E QFY
Sbjct: 207 AAMTDGTAIQLALLQGLLRTGQWTEGRGSNLFDGAAPFYRTYRCADGLHMAVGCVEPQFY 266
Query: 243 AQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
A+ L LG+T + L + + G AKL E F +T+ +W FD T+ CVTPVL
Sbjct: 267 AETLRVLGLTGDPLFARQHDRGAWPAMAAKLAEVFAGRTRDDWTARFDGTETCVTPVLDW 326
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHTREVLRHF 355
++A HPHN RG++ G P APR TP E PA G T EVLR
Sbjct: 327 TEAARHPHNAGRGTYRITPDGYPEPGTAPRFLGTPS----PEPRPAAVTGSDTDEVLRQA 382
Query: 356 GYSDANIEELIREDVI 371
G + L E VI
Sbjct: 383 GIGADELAALRSEGVI 398
>gi|145594654|ref|YP_001158951.1| L-carnitine dehydratase/bile acid-inducible protein F [Salinispora
tropica CNB-440]
gi|145303991|gb|ABP54573.1| L-carnitine dehydratase/bile acid-inducible protein F [Salinispora
tropica CNB-440]
Length = 388
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 153/378 (40%), Positives = 212/378 (56%), Gaps = 21/378 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH---------GAQPFVQDTVGYGKKS 53
L + V+E AG+ P PF M+L + GA VIR+D+ G P D + G++S
Sbjct: 10 LADVRVIELAGIGPGPFAAMMLADLGAEVIRVDRAADVDPTAFGGPHP---DLLNRGRRS 66
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+ ++LK G V L +DV++E FR GV E+L LGP NP L+Y R++G+GQ
Sbjct: 67 IGVDLKSPPGRDVALALTAGADVLIEGFRPGVTERLGLGPADCHAVNPHLVYGRMTGWGQ 126
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP + AGHDI YL L+G L +G P PP NL DFGGGG++ ALG+V AL+
Sbjct: 127 HGPSAPEAGHDIAYLALTGALHGIGRAGERPVPPLNLLGDFGGGGMLLALGLVSALYAVR 186
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
GQV+D +V+G + L + + + W PRG NLLDGGA FYD+YE DG+ +A
Sbjct: 187 GGAAGQVVDAAIVDGVSVLSTQIHALRHLGRWRDPRGVNLLDGGAPFYDSYECADGKHLA 246
Query: 234 VGALESQFYAQLLAGLGMT---EEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNT 287
VGALE +FY +L+ G + L + + E R F+ +T+ EW +F +
Sbjct: 247 VGALEPRFYDELVRRTGFPLPGDTALDRTDPENWPALREAWARLFRTRTRDEWATLFTGS 306
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH 347
DACV PVL ++A HPH R +F+ + GV PAPAPR S TP + + P PG H
Sbjct: 307 DACVAPVLDWTEAPVHPHLAARETFVEHH-GVTQPAPAPRFSGTP--TALHRPPPHPGEH 363
Query: 348 TREVLRHFGYSDANIEEL 365
T E+L G+ I +L
Sbjct: 364 TDELLAEAGFGADRIADL 381
>gi|146281006|ref|YP_001171159.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri A1501]
gi|145569211|gb|ABP78317.1| alpha-methylacyl-CoA racemase [Pseudomonas stutzeri A1501]
Length = 377
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 211/377 (55%), Gaps = 16/377 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD-----TVGYGKKSLCI 56
AL G+ ++E AG+ P PFCGM+L + GA VI I++ G + D V GK+SL +
Sbjct: 3 ALDGVRIVEIAGIGPGPFCGMLLADMGAEVILIERAGKGGDLLDLGQHAIVNRGKRSLAL 62
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + + L +D ++E R GVME+L LGP+V NPRL+Y R++G+GQ GP
Sbjct: 63 DLKDPAAIEAVLRLIEGADGLIEGMRPGVMERLGLGPEVCLTRNPRLVYGRMTGWGQKGP 122
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ LSG L G P P L D GGG L A+G++ + S +G
Sbjct: 123 LAQTAGHDLNYIALSGALWFSGEAGAPPLAPPTLVGDLGGGALYLAMGMLAGIINASNNG 182
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+GSA L + L RG+ LLD GAH+ TY DG F++V A
Sbjct: 183 VGQVVDAAIVDGSANLMNLLLSAHSAGQQPLARGQGLLD-GAHWAQTYACADGHFISVQA 241
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QF A L A LG+ +++ ++ + + R +L F + + W ++ + +DAC
Sbjct: 242 LEPQFNALLFAKLGLGDDQDFKNPYDPRLWGSLRERLAALFISQPRQHWVDLLEGSDACF 301
Query: 292 TPVLSLSQATSHPHNVHRGSFI-PNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
PVL+ +A SHPH RG + PN GV+ APAPR S TP P G H +
Sbjct: 302 APVLTPLEAMSHPHMAARGVYSKPN--GVLQAAPAPRFSATPAGEPGAV--PKRGEHGAD 357
Query: 351 VLRHFGYSDANIEELIR 367
+LR G S+A I+ L++
Sbjct: 358 ILRAAGLSEAAIQGLLQ 374
>gi|357417508|ref|YP_004930528.1| putative acyl-CoA transferase/carnitine dehydratase
[Pseudoxanthomonas spadix BD-a59]
gi|355335086|gb|AER56487.1| putative acyl-CoA transferase/carnitine dehydratase
[Pseudoxanthomonas spadix BD-a59]
Length = 369
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 211/356 (59%), Gaps = 27/356 (7%)
Query: 22 MILNEFGATVIRIDK----------HGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLA 71
M+L + GA ++RID+ +P + G++SL ++LK A+G++ L
Sbjct: 1 MMLADMGAQILRIDRLDEVGKDRDGEFLKPGRSSVLNRGRRSLALDLKCAQGVATFLQLV 60
Query: 72 NQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLS 131
+D ++E FR GVME+L +GP+ NPRL+Y R++G+GQDGP S AGHDINY+ +S
Sbjct: 61 ESADALIEGFRPGVMERLGIGPEPCHARNPRLVYGRVTGWGQDGPLSQAAGHDINYIAIS 120
Query: 132 GILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAY 191
G L +G + P P + D GGGG+M ALGIV AL E +SG+GQV+D + +G+A
Sbjct: 121 GALHAIGRADSGPVAPPAMIGDIGGGGMMLALGIVSALLETQRSGQGQVVDAAITDGAAL 180
Query: 192 LGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGM 251
+ S + + +W+ R NLLDGGAHFYDTY+ DG+++++G++E QFY LL L +
Sbjct: 181 MASIVYEFKAMGMWNNARQSNLLDGGAHFYDTYQCADGKWISIGSVEPQFYKLLLDKLEI 240
Query: 252 TEEEL-PQHEVETGRA---KLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNV 307
+ PQ + A KL + F+ KT+ +WC + + +D C PVL L +A HPHN
Sbjct: 241 NDPAFAPQFDTAVWPALKQKLAQAFRGKTRDQWCALMEGSDVCFAPVLDLDEAPHHPHNA 300
Query: 308 HRGSFIPNRAGVVAPAPAPRLSRT---PGTSKITEHNPAP--GVHTREVLRHFGYS 358
R +FI R G+ PAPAPR SRT PG PAP G HT + L +G +
Sbjct: 301 ARNTFI-ERDGITHPAPAPRFSRTATEPG-------GPAPYAGEHTEQALADWGVT 348
>gi|94495172|ref|ZP_01301753.1| Alpha-methylacyl-CoA racemase [Sphingomonas sp. SKA58]
gi|94425438|gb|EAT10458.1| Alpha-methylacyl-CoA racemase [Sphingomonas sp. SKA58]
Length = 364
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/344 (39%), Positives = 195/344 (56%), Gaps = 16/344 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---------DTVGYGKKS 53
L GI +LE + P P M+L + GA ++RI + P V D + +
Sbjct: 8 LAGIRLLEIDAIGPVPLAAMLLADMGAEIVRIAR---PPSVAAGDWDDVGGDILHRSRVV 64
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
++LK+ + L ++D ++E +R GVME+L +GPDV NPR ++ R++G+GQ
Sbjct: 65 TYLDLKQDADRERLLALIERADGLIEGYRPGVMERLGVGPDVCLARNPRFVFGRMTGWGQ 124
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP + AGHDINYL ++G L +G R P P NL D+GGG + G++ AL
Sbjct: 125 SGPLALRAGHDINYLSITGALHAMGERQGTPPVPLNLVGDYGGGAMFLIFGLLSALLAAQ 184
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
++GRGQV+D + +G A L S Q LW+ G NLLDG A FY YE DGR +A
Sbjct: 185 RTGRGQVVDACITDGVASLMSLFYAWQPKGLWEDAPGSNLLDGAAPFYRCYECADGRHVA 244
Query: 234 VGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTE---KFKEKTQAEWCEIFDNTDAC 290
VG LE +F+AQ++ GLG+++ Q++ E A E F K++ EW +F +DAC
Sbjct: 245 VGCLEPKFFAQMVDGLGLSDRCYDQNDREGWPAMQVEFAAAFLAKSRDEWAALFAASDAC 304
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGT 334
VTPVLS+ +A H HN R +F+ R GVV P+PAPRLS G
Sbjct: 305 VTPVLSMEEAPRHAHNEARATFV-QRHGVVQPSPAPRLSLDAGA 347
>gi|407800904|ref|ZP_11147750.1| alpha-methylacyl-CoA racemase [Oceaniovalibus guishaninsula
JLT2003]
gi|407057242|gb|EKE43232.1| alpha-methylacyl-CoA racemase [Oceaniovalibus guishaninsula
JLT2003]
Length = 361
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 193/338 (57%), Gaps = 7/338 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ ++EFAG+ P PF M+L + GA ++RI + G D + G++ + ++LK A+
Sbjct: 9 LAGLRIVEFAGIGPGPFAAMMLADMGADIVRIARPGDAAAPDDPILRGRRGVALDLKSAR 68
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G +L Q+D ++E FR GVME+L LGP+ NPRL+Y R++G+GQ GP + AG
Sbjct: 69 GRDAALHLIGQADGLIEGFRPGVMERLSLGPEACHAVNPRLVYGRMTGWGQTGPLARAAG 128
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYL LSG L G R P P NL D+G G ++ G++ AL +++G+G VID
Sbjct: 129 HDINYLALSGALWSTGEAGRPPVAPLNLLGDYGAGAMLLVAGMLAALLAAARTGQGNVID 188
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+ +GSA L + W+ R N LDGGA FY YE DGR++++ LE QF+
Sbjct: 189 AAICDGSALLMTMFYDKIARGEWEVARQSNRLDGGAPFYGVYECADGRWISLAPLEPQFH 248
Query: 243 AQLLAGLGMTEEELPQHEVE----TGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
A L+ LG+ +E+ + RA+ F+ +T+ EWC +F+ TD C PVL
Sbjct: 249 ALFLSLLGLPDEDAADRHDKARWPARRAEFAAIFRRRTRDEWCALFEGTDVCFAPVLDPD 308
Query: 299 QATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK 336
+A HPHN R F + V PAPAPR +P +
Sbjct: 309 EAPGHPHNRARAVFTHD---PVTPAPAPRFGSSPAPRR 343
>gi|323525674|ref|YP_004227827.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1001]
gi|323382676|gb|ADX54767.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
sp. CCGE1001]
Length = 370
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 205/367 (55%), Gaps = 22/367 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD-----TVGYGKKSLCIN 57
L G+ VLE AG+ P PFCGM+ + GA V+ +++ A P D GK+S+ ++
Sbjct: 9 LVGLKVLEIAGIGPGPFCGMLFADLGADVVVVERIEAGPDALDLGSAQIANRGKRSVSVD 68
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK +G+ + L D ++E R GVME+L LGPD NPRL+Y R++G+GQ GP
Sbjct: 69 LKTPEGVETVLRLVEGCDALIEGMRPGVMERLGLGPDACLARNPRLVYGRMTGWGQSGPL 128
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ LSG L G P P +L D GGG + A+G++ + +G
Sbjct: 129 AHAAGHDLNYIALSGALWYAGQPGEPPVTPPSLVGDVGGGSMYLAVGLLAGIMNARATGE 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+GSA++ + L Q + RG++LLD G H+Y+TY D RF++VG+L
Sbjct: 189 GQVVDAAIVDGSAHMTTLLLALQASGQMRTERGQSLLD-GPHWYNTYRCADNRFISVGSL 247
Query: 238 ESQFYAQLLAGLGMTEEELPQ-------HEVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
E +FY +L A LG+ E PQ + R +L F ++T+ EWC + + +DAC
Sbjct: 248 EPKFYRELCARLGL--EADPQFDKPYDARKWPQSRERLASLFLQRTRDEWCTLLEGSDAC 305
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHT 348
PVL+ +A +HPH R ++ GV+ +PAPR S TP P P G H
Sbjct: 306 FAPVLTPDEAAAHPHMRAREIYL-RENGVLQASPAPRFSATPAARP----GPIPRRGEHN 360
Query: 349 REVLRHF 355
VLR +
Sbjct: 361 DIVLRDW 367
>gi|409078343|gb|EKM78706.1| hypothetical protein AGABI1DRAFT_107205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 407
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 227/417 (54%), Gaps = 46/417 (11%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL GI V+EFAGLAP PF G++L + GA+V RID+ A D + GK+S+ ++ K
Sbjct: 1 MALAGIKVIEFAGLAPGPFAGLVLADNGASVTRIDRPNAG--SADVLTRGKRSIIVDSKT 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS------NPRLIYARLSGYGQD 114
G +++NL +DV+++PFR GVMEKL LGP++ + N RLIYAR+ G+ +
Sbjct: 59 LSGRDLLRNLIASADVVIDPFRPGVMEKLGLGPEIFFGNDRTKGLNERLIYARIVGFPRT 118
Query: 115 GPYSSMAGHDINYLGLSGILSLLG-WRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP+ MAGHDINY+ LSG L+++ + P P N+ ADF GGGLMCALG+++AL ER
Sbjct: 119 GPHRDMAGHDINYIALSGALAMMPPGPSGAPRFPMNILADFAGGGLMCALGVLLALIERG 178
Query: 174 KSGRGQVIDCNMVEGSAYLGSW-----LTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+SGRGQV++ +MV G+ ++ ++ + F KP G N+LDGGA FY Y K
Sbjct: 179 RSGRGQVVNADMVHGARFVSTFVLLHHVLPASPIFGKGKP-GTNMLDGGAPFYSVYTCKG 237
Query: 229 GRFMAVGALESQFYAQLLAGL------GMTEEE----LPQHEVETG-----RAKLTEKFK 273
G FM VG LE QF+ + G E+ P + +T R+ + F
Sbjct: 238 GGFMTVGCLEPQFFKAFIDKFNKALPHGFDFEDGWRPTPNAQADTREWPKMRSYFEKGFL 297
Query: 274 EKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIP-----NRAGVVAPAPAPRL 328
T+ W ++F TDAC PVL +A + + F P N P+ L
Sbjct: 298 TNTREYWTDVFHGTDACAVPVLMPPEAAAALESSPMPEFHPRVVRHNGHDQYPPSSHKHL 357
Query: 329 SRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI----EETIEMNSKL 381
TSKI PG+HT E+L G SD I++L E + ++T N KL
Sbjct: 358 D----TSKIILQ---PGLHTEELLTEAGLSDREIKKLALEGALGKEAQKTARSNVKL 407
>gi|426199335|gb|EKV49260.1| hypothetical protein AGABI2DRAFT_177311 [Agaricus bisporus var.
bisporus H97]
Length = 407
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 227/417 (54%), Gaps = 46/417 (11%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
MAL GI V+EFAGLAP PF G++L + GA+V RID+ A D + GK+S+ ++ K
Sbjct: 1 MALAGIKVIEFAGLAPGPFAGLVLADNGASVTRIDRPNAG--SADVLTRGKRSIIVDSKT 58
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS------NPRLIYARLSGYGQD 114
G +++NL +DV+++PFR GVMEKL LGP++ + N RLIYAR+ G+ +
Sbjct: 59 LSGRDLLRNLIASADVVIDPFRPGVMEKLGLGPEIFFGNGRTKGLNERLIYARIVGFPRT 118
Query: 115 GPYSSMAGHDINYLGLSGILSLLG-WRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP+ MAGHDINY+ LSG L+++ + P P N+ ADF GGGLMCALG+++AL ER
Sbjct: 119 GPHRDMAGHDINYIALSGALAMMPPGPSGAPRFPMNILADFAGGGLMCALGVLLALIERG 178
Query: 174 KSGRGQVIDCNMVEGSAYLGSW-----LTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+SGRGQV++ +MV G+ ++ ++ + F KP G N+LDGGA FY Y K
Sbjct: 179 RSGRGQVVNADMVHGARFVSTFVLLHHVLPASPIFGKGKP-GTNMLDGGAPFYSVYTCKG 237
Query: 229 GRFMAVGALESQFYAQLLAGL------GMTEEE----LPQHEVETG-----RAKLTEKFK 273
G FM VG LE QF+ + G E+ P + +T R+ + F
Sbjct: 238 GGFMTVGCLEPQFFKAFIDKFNKALPHGFDFEDGWRPTPNAQADTREWPKMRSYFEKGFL 297
Query: 274 EKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIP-----NRAGVVAPAPAPRL 328
T+ W ++F TDAC PVL +A + + F P N P+ L
Sbjct: 298 TNTREYWTDVFHGTDACAVPVLMPPEAAAALESSPMPEFHPRVVRHNGHDQYPPSSHKHL 357
Query: 329 SRTPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI----EETIEMNSKL 381
TSKI PG+HT E+L G SD I++L E + ++T N KL
Sbjct: 358 D----TSKIILQ---PGLHTEELLTEAGLSDREIKKLALEGALGKEAQKTARSNVKL 407
>gi|221068367|ref|ZP_03544472.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni KF-1]
gi|220713390|gb|EED68758.1| L-carnitine dehydratase/bile acid-inducible protein F [Comamonas
testosteroni KF-1]
Length = 416
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 208/380 (54%), Gaps = 24/380 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRI----DKHGAQPFVQDTVGYGKKSLCINL 58
L G+ VLEFAG+ PAPF GM+L + GA +I I D A + + GKKS+ ++L
Sbjct: 37 LSGMRVLEFAGIGPAPFAGMMLADMGAELILIERSADHAAASRYPRMAQNRGKKSIALDL 96
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + L +D ++E FR GVME+L P+ + + PRL++ R++G+GQ GP S
Sbjct: 97 KSEAGRAAAWKLIESADALIEGFRPGVMERLGFSPEEVARRAPRLVFGRVTGWGQTGPLS 156
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G++S + P P + D GG + G++ A+ E +SGRG
Sbjct: 157 QAAGHDINYVALTGVMSTSMRPGQAPVLPPTIVGDMAGGAMFLLFGLMCAMHEARQSGRG 216
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTF-LWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
QV+D M++G A + + + + W +N + FY+ +E DGR++ +GA+
Sbjct: 217 QVVDAAMIDGVAAMSGLMHQMRGAMGYWKDDPAQNHFLNTSPFYEAFECADGRYITLGAI 276
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QFYA L LG+ + + P+ + ++ ++++ + KTQA+WC + +D C
Sbjct: 277 EPQFYALQLQKLGLPDVD-PRRQYQSADWPELKSRVAGMVRGKTQAQWCAELEGSDVCFA 335
Query: 293 PVLSLSQATSHPHNVHRGSFIP---NRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH-- 347
PVLSL++A SHPHN R F+ + PAPAPR SRTP P PG
Sbjct: 336 PVLSLAEAPSHPHNAQRQLFVDLEVEGSSQRQPAPAPRFSRTPA------RRPTPGSRIG 389
Query: 348 --TREVLRHFGYSDANIEEL 365
T VL GY+ A+I L
Sbjct: 390 QDTDAVLAALGYTQADIVAL 409
>gi|319764939|ref|YP_004128876.1| l-carnitine dehydratase/bile acid-inducible protein f
[Alicycliphilus denitrificans BC]
gi|317119500|gb|ADV01989.1| L-carnitine dehydratase/bile acid-inducible protein F
[Alicycliphilus denitrificans BC]
Length = 393
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA------QPFVQDTVGYGKKSLCI 56
L GI ++E AG+ PAPF M+L + GATV+RID+ +P + + +++L I
Sbjct: 16 LHGIRLIELAGIGPAPFAAMLLADLGATVLRIDRPVPAQLGIERPLKFNLLLRNRQNLAI 75
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK G +++ L ++D ++E FR GV E+L LGPD NPRL+Y R++G+GQDGP
Sbjct: 76 DLKSEAGRALVLELVERADGLIEGFRPGVTERLGLGPDPCLARNPRLVYGRMTGWGQDGP 135
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+G+LS +G + P PP NL DFGGGGL ALG++ A+ E G
Sbjct: 136 LAQAAGHDLNYIALTGVLSWIGRPEQGPVPPLNLVGDFGGGGLYLALGMLAAILESRIRG 195
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +++G+A L + + L RG N+LDGGA FYD Y KDG+++ +
Sbjct: 196 HGQVVDAAIIDGTASLATSVFGMHAAGLLGS-RGSNILDGGAPFYDVYRCKDGKYVCIAP 254
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +FYA+L LG + E + + + + +L F T+ EWC + + TDAC +
Sbjct: 255 IEPKFYAELCRLLGHSIEAIGRQQDRQAWGATKEQLRRIFASNTRDEWCVLLEGTDACFS 314
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVL +A +HPH R +F+ GVV PAPAPR SR+
Sbjct: 315 PVLEPEEAAAHPHLKARQTFV-EVDGVVQPAPAPRFSRS 352
>gi|398955861|ref|ZP_10676644.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
gi|398150516|gb|EJM39106.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM33]
Length = 375
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 205/375 (54%), Gaps = 16/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF------VQDTVGYGKKSLCI 56
L G+ ++E AG+ P PFCGM+L + GA VI +++ G + V GK+S+ +
Sbjct: 4 LDGVRIVEIAGIGPGPFCGMLLADMGAEVILVERAGTKGADMLDLGKHAIVNRGKQSIAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + + L +D ++E R GVME+L LGPD NPRL+Y R++G+GQ GP
Sbjct: 64 DLKDPAAVEAVLRLIEGADALIEGMRPGVMERLGLGPDQCLARNPRLVYGRMTGWGQQGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ LSG L G + P P L D GGG L A+GI+ + +G
Sbjct: 124 LAQAAGHDLNYIALSGALWFSGEAGQPPMAPPTLVGDLGGGALYLAMGILAGIINAGTNG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D +V+GSA L + L RG LLD GAH+ TY DG F++V A
Sbjct: 184 VGQVVDAAIVDGSANLMNLLLSAHSAGQQPLERGCGLLD-GAHWARTYACADGLFVSVQA 242
Query: 237 LESQFYAQLLAGLGMTEE---ELPQHEVETG--RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QF A L LG+ ++ + P G R +L F + + W ++ + +DAC
Sbjct: 243 LEPQFNALLFNKLGLGDDVDFKNPYDPRLWGALRERLAAVFASQPRQHWVDLLEGSDACF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVL+ ++A SHPH RG + + GV+ APAPR S TP ++ P G HT +
Sbjct: 303 APVLTPAEALSHPHMAERGVY-SRQDGVLQAAPAPRFSTTPSSAGSV---PKRGEHTALI 358
Query: 352 LRHFGYSDANIEELI 366
LR G SDA +E LI
Sbjct: 359 LRKAGLSDAQVEHLI 373
>gi|424858999|ref|ZP_18283013.1| L-carnitine dehydratase [Rhodococcus opacus PD630]
gi|356661508|gb|EHI41819.1| L-carnitine dehydratase [Rhodococcus opacus PD630]
Length = 381
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 212/366 (57%), Gaps = 19/366 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-----GKKSLCIN 57
L G+ ++E G+ P PFCGM+L + GA VIRID+H V + G+ ++S+ ++
Sbjct: 13 LTGLRIVELGGIGPGPFCGMLLADQGADVIRIDRHTE---VGNRTGHPVLHRNRRSVALD 69
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + + + + + +D ++E FR GV E+L +GPD NP+L+Y R++G+GQDGP
Sbjct: 70 LKNPRDVETVLKIIDTADAVIEGFRPGVTERLGIGPDSCLARNPKLVYGRMTGWGQDGPL 129
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ GHDINY+ L+G L +G P P NL D GGGG++ ALG+ A+ G
Sbjct: 130 AQEPGHDINYIALTGALGAMGSDGDVPPVPLNLIGDMGGGGMLLALGMTTAMLRSRIDGC 189
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D M +G+A + + W R N+ DG A FY TY DGRF+AVG +
Sbjct: 190 GQVVDAAMTDGTAVQLALIHGLLARDRWVDRRASNMFDGAAPFYRTYRCADGRFVAVGCV 249
Query: 238 ESQFYAQLLAGLGMTEEE--LPQHEVE---TGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QFYA +L L +T++ QH+ + T +L + F + + EW +FD ACV+
Sbjct: 250 EPQFYAAMLRVLDLTDDLHFARQHDRDAWPTMAERLAQVFSTRPRTEWESMFDGQGACVS 309
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHTRE 350
PVL+L++A +HPHNV RG+F G V P+PAPR TP ++ PAP G HTRE
Sbjct: 310 PVLTLTEAAAHPHNVSRGTFGTFGDGFVQPSPAPRYLGTPASAP----TPAPYVGAHTRE 365
Query: 351 VLRHFG 356
VL G
Sbjct: 366 VLAEIG 371
>gi|357975257|ref|ZP_09139228.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
sp. KC8]
Length = 366
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 192/336 (57%), Gaps = 12/336 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-GAQPFVQDTVG-----YGKKSLCI 56
L GI ++E + P P +L + GA ++R+ + A P D VG G+ +
Sbjct: 8 LAGIRIVEIDAIGPVPLAATLLADMGADLVRVARPPSAGPAAWDDVGGAILHRGRTVTFL 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
NLK + L + +D ++E FR GVME+L +GPDV NPRL+Y R++G+GQ GP
Sbjct: 68 NLKDPDDRDALLALIDVADGLIEGFRPGVMERLGIGPDVCLARNPRLVYGRMTGWGQSGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+ L+G+L +G P P N+ D+GGG + G++ + ++G
Sbjct: 128 LAMRAGHDINYISLTGVLHAIGDGASPPPVPLNMVGDYGGGAMFLIAGMLAGILSAKRTG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQV+D + +G A L Q + LW NLLDG A FY Y DG +AVG+
Sbjct: 188 EGQVVDACITDGVAALMGLFYAWQPSGLWTDAPASNLLDGAAPFYRCYACADGGHVAVGS 247
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
LE QF+AQL++GLG+ + Q++ TG +A F+ +T+ EW F +TDACVT
Sbjct: 248 LEPQFFAQLVSGLGLADRGYDQND-RTGWPAMQADFEAVFRTRTRDEWAARFFDTDACVT 306
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
PVLS+++A HPHN R SF+ + G+V PAPAPR
Sbjct: 307 PVLSMAEAPGHPHNASRKSFV-EQDGIVQPAPAPRF 341
>gi|418531485|ref|ZP_13097399.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
ATCC 11996]
gi|371451439|gb|EHN64477.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
ATCC 11996]
Length = 394
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 207/380 (54%), Gaps = 24/380 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRI----DKHGAQPFVQDTVGYGKKSLCINL 58
L G+ VLEFAG+ PAPF GM+L + GA VI I D A + + GKKS+ ++L
Sbjct: 15 LTGMRVLEFAGIGPAPFAGMMLADMGAEVILIERSADHAAASRYPRMAQNRGKKSIALDL 74
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + L +D ++E FR GVME+L P+ + + PRL++ R++G+GQ GP S
Sbjct: 75 KSEAGRAAAWKLIESADALIEGFRPGVMERLGFSPEEVARRAPRLVFGRVTGWGQTGPLS 134
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDINY+ L+G++S + P P + D GG + GI+ A+ E +SG G
Sbjct: 135 QAAGHDINYVALTGVMSTSMRPGQAPVLPPTIVGDMAGGAMFLLFGIMCAMHEARQSGTG 194
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTF-LWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
QV+D M++G + + + + W +N + FY+ +E DG+ + +GA+
Sbjct: 195 QVVDAAMIDGVTAMSGLMHQMRGAMGYWKDDPAQNHFLNTSPFYEVFECADGKHITLGAI 254
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QFYA L LG+T+ + P+ + ++ +A++ + KTQA+WC + +D C
Sbjct: 255 EPQFYALQLQKLGLTDVD-PRRQYQSADWPEVKARVAGIVRSKTQAQWCAELEGSDVCFA 313
Query: 293 PVLSLSQATSHPHNVHRGSFIP---NRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH-- 347
PVLSL++A +HPHN R FI + + P+PAPR SRTP P PG
Sbjct: 314 PVLSLAEAPTHPHNAQRNLFIDLEVDGSTQRQPSPAPRFSRTPA------RRPTPGTRIG 367
Query: 348 --TREVLRHFGYSDANIEEL 365
T VL GY+ ++I L
Sbjct: 368 QDTDAVLASLGYTQSDIAAL 387
>gi|334342741|ref|YP_004555345.1| alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
gi|334103416|gb|AEG50839.1| Alpha-methylacyl-CoA racemase [Sphingobium chlorophenolicum L-1]
Length = 360
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 198/336 (58%), Gaps = 9/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKS-LCINLKKA 61
L GI ++E + P G ++ ++GATVIRID+ +D+V ++ L ++LK
Sbjct: 5 LHGIKIVEISAAGPVALFGWMMADYGATVIRIDRPAHVAGRKDSVHVDNRAVLELDLKDP 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ + +L Q+DV++E FR GVME++ LGPD NP+L+YAR +G+GQ GP ++
Sbjct: 65 DHVDRVLDLVAQADVLVEGFRPGVMERMGLGPDTCLARNPKLVYARCTGWGQHGPLAADP 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL L+G L+ +G P P N+ AD+GGG + A+G++ A+ +SGRGQVI
Sbjct: 125 GHDINYLALTGALAAIG-TPEAPVVPLNIGADYGGGTMPLAIGVLSAIIAAQRSGRGQVI 183
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M++GS + S + + LW R N LDG A +Y Y DG+F+AVGALE +F
Sbjct: 184 DAAMIDGSGVIVSMVYELYNRGLWHNERAVNFLDGAAPYYGVYRCSDGKFVAVGALEMKF 243
Query: 242 YAQL-----LAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
L + LG LP++ RA + E+F + W E +T+AC +PVL
Sbjct: 244 RKALSILVDVPELGEPASSLPENWPALRRA-VAERFATAPRDTWIERAADTEACCSPVLD 302
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
+++A HPHNV RG+F+ G + PAPAPR S TP
Sbjct: 303 ITEAPHHPHNVARGNFVQGPEGYM-PAPAPRFSATP 337
>gi|254502811|ref|ZP_05114962.1| CAIB/BAIF family [Labrenzia alexandrii DFL-11]
gi|222438882|gb|EEE45561.1| CAIB/BAIF family [Labrenzia alexandrii DFL-11]
Length = 375
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 200/369 (54%), Gaps = 23/369 (6%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDKH--------GAQPFVQDTVGYGKKSLCIN 57
+ ++EFAG+ P P+ M+L + GA ++RID+ G +++V G+KS+ ++
Sbjct: 1 MKIVEFAGIGPGPYGCMMLADMGAEILRIDREPTGASDIEGIDEQWKNSVARGRKSITLD 60
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + L ++D ++E FR GVME+L LGPDV NP L+YAR++G+GQ GP
Sbjct: 61 LKDPAAVETALKLIEKADAVVEGFRPGVMERLGLGPDVCLGRNPALVYARMTGWGQTGPL 120
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ LSG L G R+P PP NL D+GGGG+ A GIV AL +G
Sbjct: 121 AHAAGHDMNYISLSGALWSFGEDGRDPVPPLNLLGDYGGGGMFLAFGIVCALMRALNTGE 180
Query: 178 GQVIDCNMVEGSAYLGS----WLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
G VID + +G+A L + WL + W R N LDG A +Y Y+ DG++++
Sbjct: 181 GDVIDAAISDGTAALMAPVYMWLANNR----WQNQRASNRLDGTAPYYGVYKCSDGKWVS 236
Query: 234 VGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQA----EWCEIFDNTDA 289
+ +E +F+ L L + E ++ + F+ A WC++F+ TD
Sbjct: 237 IAPIEEKFWQLFLHLLKLDEADIGDRHDTRQWPDIRRWFESIIGAHPRDHWCQLFEGTDI 296
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
C P+L L +A +H HN R +F+ R G+V PAPAPR T + P G H
Sbjct: 297 CFAPILDLEEAPAHAHNAARETFV-ERDGIVQPAPAPRFQNAKAT--LPSRPPLIGEHNE 353
Query: 350 EVLRHFGYS 358
VL+ +G +
Sbjct: 354 SVLQDWGVT 362
>gi|440803496|gb|ELR24394.1| formylCoA transferase, partial [Acanthamoeba castellanii str. Neff]
Length = 233
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/247 (49%), Positives = 170/247 (68%), Gaps = 20/247 (8%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-GAQPFVQDTVGYGKKSLCINLK 59
MAL+G+ VLE AGLAP P+CG++L +FGA V+RID+ D + GK+SL ++LK
Sbjct: 1 MALQGLKVLEIAGLAPVPYCGLVLADFGADVVRIDRWPTGGSLSADVLARGKRSLALDLK 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K +G+ + LA ++DV++EPFR GVME+L LGPD +G Y+
Sbjct: 61 KPEGVQTLLQLAEKADVLIEPFRPGVMERLGLGPD-------------------NGYYAQ 101
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ ++G+LSLLG R NP P NL DF GGG++CALGI++A+ ER KSG+GQ
Sbjct: 102 RAGHDINYIAVAGVLSLLGRRGENPLFPGNLLGDFAGGGMLCALGILLAVIERYKSGKGQ 161
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G++YL +++ + T +W RG N+LD GA FY+TY TKDG+++AVGA+ES
Sbjct: 162 VVDAAMVDGASYLSTFIHNHRHTGIWGNARGSNVLDSGAPFYETYRTKDGKYVAVGAIES 221
Query: 240 QFYAQLL 246
QFY L+
Sbjct: 222 QFYHNLI 228
>gi|340029373|ref|ZP_08665436.1| L-carnitine dehydratase/bile acid-inducible protein F [Paracoccus
sp. TRP]
Length = 353
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 197/339 (58%), Gaps = 14/339 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQDTVGYGKKSLCINL 58
AL + ++E AG+ P PF M + GA V+RI + G+ P +D + G+ L ++L
Sbjct: 4 ALSRLRIVEIAGIGPTPFAAMWFADHGAQVVRIARPGSPQIFPLSRDVLDRGRDWLELDL 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K A+G + ++L ++D ++E R GVME+L LGP+ +NPRL+Y R++G+GQ GP +
Sbjct: 64 KSAQGRDLARDLILRADAVIEGMRPGVMERLGLGPEDF-SANPRLVYGRMTGWGQSGPLA 122
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+ YL ++G L+ +G RN +P PP NL DF G + G++ A+ ++G+G
Sbjct: 123 HTAGHDLTYLAITGALAAIGPRN-HPVPPLNLIGDFAAGSMYLVAGMLAAILAARETGKG 181
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D + +G A+L + +T + LW R NLLDGGA +Y Y G F+AVGA+E
Sbjct: 182 QVVDAAITDGVAHLMAMITGLRVNGLWQVERQANLLDGGAPYYTCYRCACGGFLAVGAIE 241
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
QF+A+L+ LG+ +LP R L + +++ +W + TDAC PV
Sbjct: 242 PQFWAELIRRLGLAGVDLPDRADPANWVALREILAARIASRSRDDWAAELEGTDACAAPV 301
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPG 333
L++ +A HPHN RG I N P PAP LSR PG
Sbjct: 302 LTMDEAPHHPHNRARGVHIGND-----PRPAPLLSRNPG 335
>gi|226362233|ref|YP_002780011.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
gi|226240718|dbj|BAH51066.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
Length = 387
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 196/345 (56%), Gaps = 16/345 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQ--------DTVGYGK 51
L G+ VL +G+ P P+ M+L + GA V+R+ + A+ Q D G
Sbjct: 5 LGGVRVLVLSGMGPVPYVSMLLADMGAQVVRVVRPTHRAARALAQTDGLRDEYDVANRGV 64
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
++ ++LK +G+ LA +DV +E +R GV E+L L P+V+ NP ++YARL+GY
Sbjct: 65 ETTALDLKDPRGVEAALRLAAAADVFIEGYRPGVAERLGLAPEVVLGHNPAIVYARLTGY 124
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQ GP + AGHDINY+ SG L L P PP NL D+ GGG + A GIV AL E
Sbjct: 125 GQSGPRAQEAGHDINYVAQSGALHALARSGERPRPPINLLGDYAGGGAIGAFGIVCALLE 184
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
+KSG GQV+D MV+G A L + L + L+ G N +D GA FYDTY DGR+
Sbjct: 185 ATKSGHGQVVDVAMVDGVALLTAKLQGLRAAGLFSDEPGTNWIDSGAPFYDTYRCADGRY 244
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNT 287
+AVGALE FY + LAGLG+ + P T L E +T+ EW I+ T
Sbjct: 245 LAVGALEPDFYREFLAGLGVGTTDWPDQNDRTRWPHLREFIATAIAGRTRDEWESIYAGT 304
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
DACV+PVL+ +A PHN RG + GV+ PAPAPRL+RTP
Sbjct: 305 DACVSPVLTFDEAAVDPHNAERGLY-QRVGGVLQPAPAPRLARTP 348
>gi|119386811|ref|YP_917866.1| L-carnitine dehydratase/bile acid-inducible protein F [Paracoccus
denitrificans PD1222]
gi|119377406|gb|ABL72170.1| L-carnitine dehydratase/bile acid-inducible protein F [Paracoccus
denitrificans PD1222]
Length = 353
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 198/342 (57%), Gaps = 14/342 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQDTVGYGKKSLCINL 58
AL + V+E AG+ P PF M L + GA V+RI + G+ P +D + G+ L ++L
Sbjct: 4 ALSSLRVVEIAGIGPTPFSAMWLADHGAQVVRIARPGSPQIFPLKRDVLDRGRDWLELDL 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G + ++L ++D ++E R GVME+L LGP NPRL+Y R++G+GQ GP +
Sbjct: 64 KSPEGRVIARDLILRADAVIEGMRPGVMERLGLGPGDF-PENPRLVYGRMTGWGQTGPLA 122
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+ YL ++G LS +G + +P PP NL DF G + G++ A+ ++GRG
Sbjct: 123 HSAGHDLTYLAITGALSAIGPAD-HPVPPLNLVGDFAAGSMYLVAGMLAAILRARETGRG 181
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D + +G A+L + ++ + LW R NLLDGGA +Y Y G F+A+GA+E
Sbjct: 182 QVVDAAITDGVAHLMAMISGLRVNGLWRDERQANLLDGGAPYYSCYRCACGGFLAIGAIE 241
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPV 294
QF+A L+ L ++E +LP A L E + +++ +W + TDAC PV
Sbjct: 242 PQFWADLVRRLDLSEADLPDRADPANWAALREILAARIATRSRDDWAAALEGTDACAAPV 301
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK 336
LS+ +A HPHN RG+++ P PAP LSR PG+ +
Sbjct: 302 LSIDEAPGHPHNHARGTYVERD-----PRPAPLLSRDPGSLR 338
>gi|299534195|ref|ZP_07047546.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
S44]
gi|298717842|gb|EFI58848.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
S44]
Length = 377
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 208/377 (55%), Gaps = 24/377 (6%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRI----DKHGAQPFVQDTVGYGKKSLCINLKKA 61
+ V+EFAG+ PAPF GM+L + GA VI I D A + + GKKS+ ++LK
Sbjct: 1 MRVIEFAGIGPAPFAGMMLADMGAEVILIERSADHAAASRYPRMAQNRGKKSIALDLKSE 60
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G + L +D ++E FR GVME+L P+ + + PRL++ R++G+GQ GP S A
Sbjct: 61 GGRAAAWKLIESADALIEGFRPGVMERLGFSPEEVARRAPRLVFGRVTGWGQTGPLSQAA 120
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G++S + P P + D GG + GI+ A+ E +SGRGQV+
Sbjct: 121 GHDINYVALTGVMSTSMRPGQAPVLPPTIVGDMAGGAMFLLFGIMCAMHEARQSGRGQVV 180
Query: 182 DCNMVEGSAYLGSWLTRTQDTF-LWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
D M++G + + + + + W +N + FY+ +E DG+ + +GA+E
Sbjct: 181 DAAMIDGVSAMSGLMHQMRSGMGYWKDDPAQNHFLNTSPFYEVFECADGKHITLGAIEPP 240
Query: 241 FYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA L LG+T+ + P+ + ++ +A++ E + KTQA+W E + +D C PVL
Sbjct: 241 FYALQLQKLGLTDVD-PRRQYQSSDWPEVKARVAEIVRRKTQAQWSEELEGSDVCFAPVL 299
Query: 296 SLSQATSHPHNVHRGSFIP---NRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVH----T 348
SL++A +HPHN R F+ + + P+PAPR SRTP S P PG T
Sbjct: 300 SLAEAPAHPHNARRNLFVDLEVDGSIQCQPSPAPRFSRTPARS------PTPGTRIGQDT 353
Query: 349 REVLRHFGYSDANIEEL 365
VL GY+ A+I L
Sbjct: 354 DAVLASLGYAQADIAAL 370
>gi|299533650|ref|ZP_07047024.1| hypothetical protein CTS44_22669 [Comamonas testosteroni S44]
gi|298718372|gb|EFI59355.1| hypothetical protein CTS44_22669 [Comamonas testosteroni S44]
Length = 379
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/366 (39%), Positives = 209/366 (57%), Gaps = 13/366 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ------DTVGYGKKSLCI 56
L G+ VLE + P P+ GM+L + GA V+RID+ AQ G GK+S+
Sbjct: 8 LTGLRVLEMEAIGPVPWAGMMLADMGADVVRIDRPEAQHMGMRRDERFQFNGRGKRSVLA 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
++K +G ++ N+ ++DV+LE R GVME+L LGP+ NP L+Y R++G+GQ GP
Sbjct: 68 DVKTVEGRELVLNMVERADVLLEGLRPGVMERLGLGPNECLARNPALVYGRMTGWGQSGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ GHDINY+ +G+L +G P P NL DFGGGG++ G++ A G
Sbjct: 128 LAQAVGHDINYIATTGVLHAVGPAEEVPPVPLNLIGDFGGGGMLLLAGVLAAALHVRGGG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D MV+G+ L + + W + R N LDGGAHFY Y T DG+++AVGA
Sbjct: 188 QGQVVDAAMVDGTLALMAPILGQWQAGEWSERRQSNWLDGGAHFYRNYATADGKYLAVGA 247
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +FYA LL GLG+ E+LP+ + R +L+ ++ + A W +F+ T+ACV+
Sbjct: 248 IEPRFYAALLQGLGLAGEQLPKQHDRSAWPSMRERLSNIVRQHSCAHWMAVFEGTEACVS 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLSL + S H RGSF+ N G + PAPAPR S TP S I G + L
Sbjct: 308 PVLSLGELASQSHLAQRGSFV-NVEGALHPAPAPRFSHTP--SAIASAPVVRGANAEATL 364
Query: 353 RHFGYS 358
+G S
Sbjct: 365 ADWGVS 370
>gi|318080365|ref|ZP_07987697.1| fatty acid-CoA racemase [Streptomyces sp. SA3_actF]
Length = 377
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 193/319 (60%), Gaps = 13/319 (4%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQPFVQDTVGYGKKSLCINLK 59
+ VLE AGL P PF M+L + GA V+R+D+ G P V D GK+S+ ++LK
Sbjct: 1 MRVLELAGLGPGPFAAMLLADLGADVVRVDRPERGGMFGMDP-VLDFTNRGKRSVELDLK 59
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G + + LA ++D+++E FR GV E+L +GP+ +NPRL+Y R++G+GQ+GP +
Sbjct: 60 TEEGAAAVLALAERADLLVEGFRPGVAERLGVGPEQALAANPRLVYGRVTGWGQEGPLAH 119
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+ YL +G L+L G + PT P NL DF GG L +G++ AL ++G GQ
Sbjct: 120 RAGHDLTYLAPTGALALGGDPDAPPTFPANLLGDFAGGSLYLVVGLLAALRHAERTGEGQ 179
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+G+A+L + L W RG NLLDGG+ FY YET DG+ MAVGALE
Sbjct: 180 VVDAAIVDGAAHLTTLLHGLMAAGGWQDRRGSNLLDGGSPFYGCYETADGKHMAVGALEK 239
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
+FY + LG+ E + + + RA++ F+ +T+AEW ++F ++D CV PVLS
Sbjct: 240 RFYNEFTERLGIAETAPAREDFDHWDELRARIAAAFRTRTRAEWTKVFADSDGCVAPVLS 299
Query: 297 LSQATSHPHNVHRGSFIPN 315
L +A PH S P+
Sbjct: 300 LREA---PHTRTSPSGTPS 315
>gi|229488486|ref|ZP_04382352.1| alpha-methylacyl-CoA racemase [Rhodococcus erythropolis SK121]
gi|229323990|gb|EEN89745.1| alpha-methylacyl-CoA racemase [Rhodococcus erythropolis SK121]
Length = 375
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 204/372 (54%), Gaps = 21/372 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK------HGAQPFVQDTVGYGKKSLCI 56
L G+ ++E G+ P PFCGM+L + GA VIRID+ P + ++S+ +
Sbjct: 11 LAGLRIVELGGIGPGPFCGMLLADQGADVIRIDRSTEAGNQSGHPVLH----RNRRSVAL 66
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + + + + +D ++E FR GV E+L GPD NP+L+Y R++G+GQDGP
Sbjct: 67 DLKDPHDVDTVLKIIDTADAVIEGFRPGVTERLGFGPDTCLARNPKLVYGRMTGWGQDGP 126
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+S GHD+NY+ L+G L +G P P NL D GGGG++ ALGI A+ G
Sbjct: 127 LASEPGHDLNYIALTGALGAMGAPGDVPPVPLNLVGDMGGGGMLLALGITTAMLRARIDG 186
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D M +G+A + + W R N+ DGGA FY Y DG FMAVG
Sbjct: 187 RGQVVDAAMTDGTALQLALIHGLLARDRWVDERASNMFDGGAPFYRNYRCADGGFMAVGC 246
Query: 237 LESQFYAQLLAGLGMTEEEL--PQHEVETGRA---KLTEKFKEKTQAEWCEIFDNTDACV 291
+E QFYA + LG+TE+ L QH + A +L E F +T+ EW FD ACV
Sbjct: 247 VEPQFYAATMRVLGLTEDPLFAQQHNRDAWPAMADRLAELFATRTRDEWDSAFDMQGACV 306
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHTR 349
+PVL+ ++A +HPHN R +F G + P PAPR S TP + PAP G HT
Sbjct: 307 SPVLNFNEAAAHPHNAFRATFGKFGDGHIQPNPAPRYSDTPA----DDPRPAPVIGQHTD 362
Query: 350 EVLRHFGYSDAN 361
EVL G A
Sbjct: 363 EVLAEIGVVTAT 374
>gi|33597379|ref|NP_885022.1| fatty-acyl-CoA racemase [Bordetella parapertussis 12822]
gi|33602119|ref|NP_889679.1| fatty-acyl-CoA racemase [Bordetella bronchiseptica RB50]
gi|427814256|ref|ZP_18981320.1| putative fatty-acyl-CoA racemase [Bordetella bronchiseptica 1289]
gi|33573806|emb|CAE38114.1| putative fatty-acyl-CoA racemase [Bordetella parapertussis]
gi|33576557|emb|CAE33635.1| putative fatty-acyl-CoA racemase [Bordetella bronchiseptica RB50]
gi|410565256|emb|CCN22809.1| putative fatty-acyl-CoA racemase [Bordetella bronchiseptica 1289]
Length = 390
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 217/384 (56%), Gaps = 15/384 (3%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRID---KHGAQPFVQ---DTVGYGKKSLC 55
AL+G+ ++E GL PAPF M+L + GA V+R+ + G P + D + G++SL
Sbjct: 11 ALQGLRIIEMVGLGPAPFAAMMLADHGADVVRVHAAHRKGDFPLLDSRFDVLARGRRSLA 70
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L+ ++ L +D ++E FR GVME++ L P+ + PRL+Y R++G+GQ G
Sbjct: 71 LDLRAPGASDLLLELVGAADGLIEGFRPGVMERMGLAPEACLRRQPRLVYGRMTGWGQQG 130
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHD+NYLGL+G L +G +R P P N ADFGGGG++ A G++ AL
Sbjct: 131 PLARQAGHDLNYLGLTGALHAIGPSDRPPPVPLNYVADFGGGGMLLAFGMLAALLAVRGG 190
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GQV+D MV+G+ L S + W R NLLDGGA+FY TY DGRF+AV
Sbjct: 191 APGQVVDAAMVDGAGLLASMFWGFRAGGGWSDRREGNLLDGGAYFYATYACADGRFLAVA 250
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
+E +F+ L+ LG+ + + H+ + RA+L F + + W +F+++DAC
Sbjct: 251 CVERRFHDLLVERLGL-DPAVYTHDRDPAQWPALRARLAALFATRPRDHWAALFEDSDAC 309
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
VTPVL +A HPH R +I + GV PAPAPRLS T ++ PA G H+ E
Sbjct: 310 VTPVLDWREAAHHPHAAARAGYI-DVEGVTQPAPAPRLSAT--PARQPAAAPAVGAHSVE 366
Query: 351 VLRHFGYSDANIEELIREDVIEET 374
VL +G + + + +I +
Sbjct: 367 VLHEWGLAPERVASALDSGLIVQA 390
>gi|227832710|ref|YP_002834417.1| alpha-methylacyl-CoA racemase [Corynebacterium aurimucosum ATCC
700975]
gi|262182801|ref|ZP_06042222.1| alpha-methylacyl-CoA racemase [Corynebacterium aurimucosum ATCC
700975]
gi|227453726|gb|ACP32479.1| alpha-methylacyl-CoA racemase [Corynebacterium aurimucosum ATCC
700975]
Length = 336
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/334 (39%), Positives = 194/334 (58%), Gaps = 11/334 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP-FVQDTVGY-GKKSLCINLKK 60
L G++VL G+ P PF M+L + GA V R+ + G P V ++ Y G++ L ++LK
Sbjct: 5 LTGLSVLFLGGIGPGPFAAMMLADMGAQVTRVVRPGNPPAVVPHSILYRGQEVLEVDLKD 64
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSM 120
+ ++ +D+++E FR GV E+L LGP+ + + NP L+Y R++G+GQ GP +
Sbjct: 65 PVDVDKLRQRLTTTDILIEGFRPGVAERLALGPEEVQEINPALVYGRITGWGQSGPLAHT 124
Query: 121 AGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
AGHDINY+ +SG L + + P PP N DFGGG + G++ + + +GRG V
Sbjct: 125 AGHDINYIAVSGALHPIAGSDGAPVPPVNFLGDFGGGSMYLVTGLLAGVLQAKNTGRGCV 184
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
+D +V+G+A L + L + W + RG NLLDGGA FY Y T D ++MA GA+E Q
Sbjct: 185 VDAAIVDGAANLTAMLHAFRAEGQW-QDRGTNLLDGGAPFYSVYRTADDQWMAAGAIEPQ 243
Query: 241 FYAQLLAGLGMTEEELPQHEVETGRA------KLTEKFKEKTQAEWCEIFDNTDACVTPV 294
FY ++ GLG+T EEL Q+E A + +F EKTQAEW +IF DACVT V
Sbjct: 244 FYELMVEGLGLT-EELGQYEQNDRSAWPAMKEIIARRFAEKTQAEWIDIFRGGDACVTEV 302
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
+S HPH R +++ + G P PAPR
Sbjct: 303 VSPEDVLEHPHLTARNTYV-SAEGHTEPGPAPRF 335
>gi|453072947|ref|ZP_21975960.1| fatty acid-CoA racemase [Rhodococcus qingshengii BKS 20-40]
gi|452756717|gb|EME15125.1| fatty acid-CoA racemase [Rhodococcus qingshengii BKS 20-40]
Length = 396
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/343 (40%), Positives = 199/343 (58%), Gaps = 11/343 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQDTVG---YGKKSLCI 56
L GI V+E + P G++L + GA V+RI + GA + D G+ L
Sbjct: 14 LSGIRVIEMEAIGPLLHAGLMLADLGADVVRIVRPISMGADDGIDDANAGMLRGRTELTA 73
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+L K + L+ ++ L ++DV++E R G MEKL LG ++ + NP LIY R+SG+GQ GP
Sbjct: 74 DLTKTEDLAKVRRLIGRADVLMEGSRPGTMEKLGLGSEICLQDNPGLIYGRMSGWGQKGP 133
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NYL LSG L LG + P+PP N +FGGG + +G++ AL ER ++G
Sbjct: 134 MAREAGHDLNYLALSGALEQLGPASGPPSPPLNYVGNFGGGSMFLLVGVLAALHERERTG 193
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D MV+G++ L + + Q W RG NLLDG A FY YE D R+MAVGA
Sbjct: 194 RGQVVDTAMVDGASSLTALVRSWQHAGRWSARRGTNLLDGSAPFYRAYECADHRYMAVGA 253
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVT 292
LE +Y + + GLG+ LP ++ L+E+F + W E+FD +ACVT
Sbjct: 254 LEDVYYDRFVFGLGLDPASLPNRWDQSNWDDLSERFGRTFATHDRDAWVEVFDGLNACVT 313
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
PVL+L +AT H H + R +F+ + G P+ APRL + G +
Sbjct: 314 PVLTLHEATLHDHAIRRTAFV-DAGGFSMPSAAPRLDSSQGAA 355
>gi|409390074|ref|ZP_11241845.1| alpha-methylacyl-CoA racemase [Gordonia rubripertincta NBRC 101908]
gi|403199901|dbj|GAB85079.1| alpha-methylacyl-CoA racemase [Gordonia rubripertincta NBRC 101908]
Length = 369
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 206/348 (59%), Gaps = 31/348 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP-----FVQDTVGY--GKKSLC 55
L G+ V+E GL P P M+L + GA VIRI + G + V+ G ++S+
Sbjct: 5 LAGVRVVEMPGLGPTPHAAMMLADLGADVIRIRRKGPEAAGPDGIVEADAGLYRSRRSVE 64
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+LK L+ ++ + ++D+++E FR GVME+L LGP++ C+ +L+YAR++G+GQDG
Sbjct: 65 ADLKDPADLARVREMILRADILVEGFRPGVMERLGLGPEI-CEDATQLVYARMTGWGQDG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
+ +AGHDINYL ++G+L +G P PP +LA DFGGG ++ +G++ AL +RS++
Sbjct: 124 DRAMLAGHDINYLAVTGVLEAMGPAGAPPVPPLSLAGDFGGGSMLLVVGVLAALHDRSRT 183
Query: 176 GRGQVIDCNMVEGSAYL----------GSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYE 225
GRGQV+D MV+G+ L G W++R++ NLLDG A FY TYE
Sbjct: 184 GRGQVVDAAMVDGAGLLAQLQWSWKAAGRWVSRSEG----------NLLDGSAPFYATYE 233
Query: 226 TKDGRFMAVGALESQFYAQLLAGLGMTE--EELPQHEVETGRAKLTEKFKEKTQAEWCEI 283
DGRF+AVGALE +F+ L+ LG+ + + + A L +F +T+ EW +
Sbjct: 234 CADGRFVAVGALEEKFWRNLIGTLGLGDLPDRWDRAHWPVISAALAARFATRTRDEWSDD 293
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
F DAC+TPVL +A + P RGS++ V PAPAPR SRT
Sbjct: 294 FAGVDACLTPVLDFDEAAADPVARQRGSYV-TVDDAVQPAPAPRFSRT 340
>gi|264677430|ref|YP_003277336.1| bile acid-inducible L-carnitine dehydratase [Comamonas testosteroni
CNB-2]
gi|262207942|gb|ACY32040.1| L-carnitine dehydratase/bile acid-inducible [Comamonas testosteroni
CNB-2]
Length = 377
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 207/377 (54%), Gaps = 24/377 (6%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRI----DKHGAQPFVQDTVGYGKKSLCINLKKA 61
+ V+EFAG+ PAPF GM+L + GA VI I D A + + GKKS+ ++LK
Sbjct: 1 MRVIEFAGIGPAPFAGMMLADMGAEVILIERSADHAAASRYPRMAQNRGKKSIALDLKSE 60
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G + L +D ++E FR GVME+L P+ + + PRL++ R++G+GQ GP S A
Sbjct: 61 GGRAAAWKLIESADALIEGFRPGVMERLGFSPEEVARRAPRLVFGRVTGWGQTGPLSQAA 120
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ L+G++S + P P + D GG + GI+ A+ E +SGRGQV+
Sbjct: 121 GHDINYVALTGVMSTSMRPGQAPVLPPTIVGDMAGGAMFLLFGIMCAVHEARQSGRGQVV 180
Query: 182 DCNMVEGSAYLGSWLTRTQDTF-LWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
D M++G + + + + + W +N + FY+ +E DG+ + +GA+E
Sbjct: 181 DAAMIDGVSAMSGLMHQMRSGMGYWKDDPAQNHFLNTSPFYEVFECADGKHITLGAIEPP 240
Query: 241 FYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA L LG+T+ + P+ + ++ +A++ E + KTQA+W E + +D C PVL
Sbjct: 241 FYALQLQKLGLTDVD-PRRQYQSSDWPEVKARVAEIVRRKTQAQWSEELEGSDVCFAPVL 299
Query: 296 SLSQATSHPHNVHRGSFIPNRA-GVV--APAPAPRLSRTPGTSKITEHNPAPGVH----T 348
SL++A +HPHN R F+ G + P+PAPR SRTP S P PG T
Sbjct: 300 SLAEAPAHPHNAQRNLFVDLEVDGSIQRQPSPAPRFSRTPARS------PTPGTRIGQDT 353
Query: 349 REVLRHFGYSDANIEEL 365
VL GY+ +I L
Sbjct: 354 DAVLASLGYAQTDIAAL 370
>gi|432349782|ref|ZP_19593217.1| alpha-methylacyl-CoA racemase Mcr [Rhodococcus wratislaviensis IFP
2016]
gi|430770867|gb|ELB86787.1| alpha-methylacyl-CoA racemase Mcr [Rhodococcus wratislaviensis IFP
2016]
Length = 367
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 192/332 (57%), Gaps = 6/332 (1%)
Query: 4 KGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKG 63
+GI VLEF GL APF +L + GA V RI++ G+ G+ ++ +LK +
Sbjct: 7 EGIRVLEFGGLGAAPFACSLLADAGAEVFRIERPGSAATRPSFTLRGRTTVEADLKSDRD 66
Query: 64 LSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGH 123
+++ LA +DV++E FR GVME+L GPD L +N L+YAR++G+GQ GP + GH
Sbjct: 67 RALVHELAVSADVLVEGFRPGVMERLGFGPDKLTAANTALVYARMTGWGQTGPAAHEPGH 126
Query: 124 DINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDC 183
D++YL + G + +P PP N+ AD+ GGGLM A GI +ALFER++SG GQVID
Sbjct: 127 DLSYLAMVGAARSIAREGHDPVPPLNMVADY-GGGLMLAYGIGLALFERTRSGTGQVIDA 185
Query: 184 NMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYA 243
M + + L S L + + W G N +D GA Y++Y T DG +MAV E +FYA
Sbjct: 186 AMTDAALLLMSGLWQRKADGQWSDVPGTNDMDSGAPHYNSYRTSDGHYMAVAGAEPKFYA 245
Query: 244 QLLAGLGMTEEELPQHEVET----GRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
+ LG+ + E T + K+ + F +T+AEW E+F +ACV PV ++ +
Sbjct: 246 NMTRLLGLEDALDGAREDRTKWPAAKQKIAQAFATRTRAEWTELFAGAEACVAPVNAVDE 305
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
S PH V S + R G V PA APR+SRT
Sbjct: 306 VASDPH-VRARSMLVERDGAVFPAAAPRMSRT 336
>gi|226187521|dbj|BAH35625.1| putative fatty acid-CoA racemase [Rhodococcus erythropolis PR4]
Length = 375
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 202/371 (54%), Gaps = 21/371 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRID------KHGAQPFVQDTVGYGKKSLCI 56
L G+ V+E G+ P PFCGM+L + GA VIRID K P + ++S+ +
Sbjct: 11 LAGLRVVELGGIGPGPFCGMLLADQGADVIRIDRSTEAGKQSGHPVLH----RNRRSVAL 66
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK + + + + +D ++E FR GV E+L LGPD NP+L+Y R++G+GQ+GP
Sbjct: 67 DLKDPHDVDTVLKIIDTADAVIEGFRPGVTERLGLGPDTCLARNPKLVYGRMTGWGQNGP 126
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ GHD+NY+ L+G L +G P P NL D GGGG++ ALGI A+ G
Sbjct: 127 LAQEPGHDLNYIALTGALGAMGAPGEVPPVPLNLVGDMGGGGMLLALGITTAMLRARIDG 186
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D M +G+A + + W R N+ DGGA FY Y DG FMAVG
Sbjct: 187 RGQVVDAAMTDGTAVQLALIHGLLARDRWVDERASNMFDGGAPFYRNYRCADGGFMAVGC 246
Query: 237 LESQFYAQLLAGLGMTEEEL--PQHEVETGRA---KLTEKFKEKTQAEWCEIFDNTDACV 291
+E QFYA + LG+TE+ L QH E A +L + F +T+ EW FD ACV
Sbjct: 247 VEPQFYAATMRVLGLTEDPLFAQQHNREAWTAMADRLADLFATRTRDEWDAAFDMQGACV 306
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHTR 349
+PVL+ +A HPHN R +F G + P PAPR S TP + PAP G HT
Sbjct: 307 SPVLNFDEAAVHPHNAFRATFGKLGDGHIQPNPAPRYSDTPA----DDPRPAPVIGRHTD 362
Query: 350 EVLRHFGYSDA 360
EVL G A
Sbjct: 363 EVLAEIGVVTA 373
>gi|209885195|ref|YP_002289052.1| alpha-methylacyl-CoA racemase [Oligotropha carboxidovorans OM5]
gi|337741180|ref|YP_004632908.1| acyl-CoA transferase [Oligotropha carboxidovorans OM5]
gi|386030196|ref|YP_005950971.1| acyl-CoA transferase [Oligotropha carboxidovorans OM4]
gi|209873391|gb|ACI93187.1| alpha-methylacyl-CoA racemase [Oligotropha carboxidovorans OM5]
gi|336095264|gb|AEI03090.1| acyl-CoA transferase [Oligotropha carboxidovorans OM4]
gi|336098844|gb|AEI06667.1| acyl-CoA transferase [Oligotropha carboxidovorans OM5]
Length = 383
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 209/339 (61%), Gaps = 11/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L G+ +E + P P CGM+L + GA V+RI++ +P + + G+ ++ +
Sbjct: 8 LAGVKFIEMPAIGPGPMCGMLLADLGADVLRIERPERADIGIERPLETNFIMRGRTTIKL 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LKK +G++++ L ++D ++E FR GVME+L LGP+ +NP+L+Y R++G+GQ GP
Sbjct: 68 DLKKPEGVALVLRLIREADGLIEGFRPGVMERLGLGPEPCLAANPKLVYGRITGWGQSGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+G L +G + P P NL DFGGG L ALG++ + E +SG
Sbjct: 128 LAKTAGHDLNYIALTGALHAMGRKGEAPPVPLNLIGDFGGGALFLALGLLAGILEARQSG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+G A + + + + + RG N+LD GA+FYD Y+ DG ++AVG
Sbjct: 188 KGQVVDAAIVDGVAAMLTSINGLMACGVSSQERGTNILDSGAYFYDAYQCADGGYVAVGP 247
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVET----GRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F+AQ L LG++ E+P + + GR +L F + + EW +F TDACVT
Sbjct: 248 IEKRFHAQFLEKLGLSVAEMPAQDDQARWPEGRERLRAIFLTRPRDEWAYLFAGTDACVT 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVLSL ++ + PH RGS++ + AG APAPR SRT
Sbjct: 308 PVLSLQESFTDPHMTARGSYV-DVAGYRQAAPAPRFSRT 345
>gi|404258444|ref|ZP_10961763.1| alpha-methylacyl-CoA racemase [Gordonia namibiensis NBRC 108229]
gi|403402958|dbj|GAC00173.1| alpha-methylacyl-CoA racemase [Gordonia namibiensis NBRC 108229]
Length = 369
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 202/348 (58%), Gaps = 31/348 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYG-------KKSLC 55
L G+ V+E GL P P M+L + GA V+RI + G + D + ++S+
Sbjct: 5 LAGVRVVEMPGLGPTPHAAMMLADLGADVVRIRRPGPEAPGPDGIAEADAGLYRSRRSVE 64
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+LK L+ ++ + ++D ++E FR GVME+L LGP++ C P+L+YAR++G+GQDG
Sbjct: 65 ADLKDPADLNRIREMILRADTLIEGFRPGVMERLGLGPEI-CADAPQLVYARMTGWGQDG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
+ +AGHDINYL ++G+L +G P PP +LA DFGGG ++ +G++ AL +RS++
Sbjct: 124 DRAMLAGHDINYLAVTGVLEAMGPAGAPPVPPLSLAGDFGGGSMLLVVGVLAALHDRSRT 183
Query: 176 GRGQVIDCNMVEGSAYL----------GSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYE 225
G GQV+D MV+G+ L G W++R++ NLLDG A FY TYE
Sbjct: 184 GHGQVVDAAMVDGAGLLAQLQWSWKAAGRWVSRSEG----------NLLDGSAPFYATYE 233
Query: 226 TKDGRFMAVGALESQFYAQLLAGLGMTE--EELPQHEVETGRAKLTEKFKEKTQAEWCEI 283
DGRF+AVGALE +F+ L+ LG+ + + A L +F +T+ EW E
Sbjct: 234 CADGRFVAVGALEEKFWRNLIGTLGLADLPNRWDRAHWPVISAALAARFATRTRDEWSEA 293
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
F DAC+TPVL +A + P RGS++ V PAPAPR SRT
Sbjct: 294 FAGVDACLTPVLDFDEAAADPVAQQRGSYV-TVDDTVQPAPAPRFSRT 340
>gi|339327808|ref|YP_004687500.1| alpha-methylacyl-CoA racemase [Cupriavidus necator N-1]
gi|338170409|gb|AEI81462.1| alpha-methylacyl-CoA racemase [Cupriavidus necator N-1]
Length = 373
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 196/360 (54%), Gaps = 15/360 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP---FVQDTV--GYGKKSLCIN 57
L G V+E AG+ P PFC M L + GA VI +++ G P D GK+S+ ++
Sbjct: 4 LSGTKVVEIAGIGPGPFCAMTLADLGADVIVVERAGTLPEGSLNADVALTNRGKRSVSVD 63
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK A+G + L +D ++E R GVME+L LGPDV NPRL+Y RL+G+GQ GP
Sbjct: 64 LKSAEGRDTVLRLIEGADALIEGMRPGVMERLGLGPDVCLARNPRLVYGRLTGWGQTGPL 123
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD NY+ LSG L + P P +L D GG L +G++ L E +G+
Sbjct: 124 AQAAGHDANYISLSGALHYASPAGQPPVAPFSLVGDVAGGSLYLVIGLLSGLLEARATGK 183
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
G V+D + +GSA++ + + + RGE+L D +HFY+TY DG F+ V +
Sbjct: 184 GCVVDAAITDGSAHMLALVLNGKKAGRISDARGESLHD-ASHFYNTYRCADGGFVTVAPV 242
Query: 238 ESQFYAQLLAGLGMTEEEL-----PQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QFY +L LG+ +E L + + R +L + F +++A W +F+ +DAC+
Sbjct: 243 EPQFYRLMLQMLGLADEPLFATQWDRTQWPAQRERLQKVFASRSRAAWQALFEGSDACIA 302
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLS +A H HNV RG++ R G + PAPR P T H G HT+ VL
Sbjct: 303 PVLSPEEAARHSHNVARGNYF-ERDGYLQAMPAPRFDGEPATPGAIPHR---GQHTQAVL 358
>gi|412338270|ref|YP_006967025.1| fatty-acyl-CoA racemase [Bordetella bronchiseptica 253]
gi|408768104|emb|CCJ52863.1| putative fatty-acyl-CoA racemase [Bordetella bronchiseptica 253]
Length = 390
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 219/384 (57%), Gaps = 15/384 (3%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRID---KHGAQPFVQ---DTVGYGKKSLC 55
AL+G+ ++E GL PAPF M+L + GA V+R+ + G P + D + G++SL
Sbjct: 11 ALQGLRIIEMVGLGPAPFAAMMLADHGADVVRVHAAHRKGDFPLLDSRFDVLARGRRSLA 70
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L+ ++ L +D ++E FR GVME++ L P+ + PRL+Y R++G+GQ G
Sbjct: 71 LDLRAPGASELLLELVGAADGLIEGFRPGVMERMGLAPEACLRRQPRLVYGRMTGWGQQG 130
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHD+NYLGL+G L +G +R P P N ADFGGGG++ A G++ AL
Sbjct: 131 PLARQAGHDLNYLGLTGALHAIGAADRPPPVPLNYVADFGGGGMLLAFGMLAALLAVRGG 190
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GQV+D MV+G++ L S + W R NLLDGGA+FY TY DGRF+AV
Sbjct: 191 APGQVVDAAMVDGASLLASMFWGFRAGGGWSDRREGNLLDGGAYFYATYACADGRFLAVA 250
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
+E +F+ L+ L + + + H+ + RA+L F + + W +F+++DAC
Sbjct: 251 CVERRFHDLLVERLRL-DPAVYTHDRDPARWPALRARLAALFATQPRDHWAALFEDSDAC 309
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
VTP+L +A H H RG+++ + GV PAPAPRLS T ++ PA G H+ E
Sbjct: 310 VTPILDWREAAHHGHAAARGAYV-DVEGVTQPAPAPRLSAT--PAREPAAAPAVGAHSVE 366
Query: 351 VLRHFGYSDANIEELIREDVIEET 374
VLR +G + + + +I +
Sbjct: 367 VLREWGIAPERVASALDSGLIVQA 390
>gi|113868121|ref|YP_726610.1| alpha-methylacyl-CoA racemase [Ralstonia eutropha H16]
gi|113526897|emb|CAJ93242.1| predicted alpha-methylacyl-CoA racemase [Ralstonia eutropha H16]
Length = 371
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 199/362 (54%), Gaps = 19/362 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG-AQPFVQDTVGY----GKKSLCIN 57
L G+ V+E G+ P PFC M L + GA VI +++ A T GY GK+S+ +
Sbjct: 2 LSGVKVVEICGIGPGPFCAMHLADLGADVIAVERAAPANDAALSTEGYVLNRGKRSVVAD 61
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK A+G ++ L +D ++E R GVME+L LGPDV + NPRL+Y R++G+GQ GP
Sbjct: 62 LKTAEGRELVLALIQDADALIEGMRPGVMERLGLGPDVCLQRNPRLVYGRMTGWGQSGPM 121
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
AGHD NY+ LSG L G P+ + D GGG L A+G++ + +G+
Sbjct: 122 VQAAGHDNNYISLSGALYYHGTPAEPPSSAITVVGDVGGGALYLAVGLLSGILNARATGK 181
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
G V+D ++V+GSA++ L T+ RG N+ D +HFY TY DG+F+ +G++
Sbjct: 182 GTVVDASIVDGSAHMLQLLLSTRRKGFITGERGNNIHD-ASHFYSTYRCADGKFVTLGSI 240
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETGRAK-------LTEKFKEKTQAEWCEIFDNTDAC 290
E QFYA LL LG+TE+ P+ + R + E F +T+A+WC + +NTD C
Sbjct: 241 EPQFYALLLEKLGLTED--PRFARQWDRERWPELHRHFEELFATRTRAQWCALLENTDVC 298
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
PVLS +A HPH RG + G + APAPR G + P G HT E
Sbjct: 299 FGPVLSPEEAAGHPHLAARGVYF-EAEGHLQAAPAPRFD---GKAMAAGAIPRRGQHTGE 354
Query: 351 VL 352
++
Sbjct: 355 IM 356
>gi|145497469|ref|XP_001434723.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401851|emb|CAK67326.1| unnamed protein product [Paramecium tetraurelia]
Length = 360
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 205/357 (57%), Gaps = 22/357 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L I VLEFAGLAP F GM+L ++GA V + + +QP + GKKS+ +LK +
Sbjct: 2 LSQIKVLEFAGLAPTVFIGMVLADYGAQVTLLSRLDSQP-QNSPMNRGKKSMTFDLKCKQ 60
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ ++K++ S+V+++P+R GV+E+L L V K NP+LIY R++G+GQ+ P AG
Sbjct: 61 DIDIVKHMIKDSNVLIDPYRPGVLERLGLSYQVCSKINPKLIYCRVTGFGQNSPLKEKAG 120
Query: 123 HDINYLGLSGIL---SLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
HDIN++ G+L S G + R P P N+ DF GG++ I+ AL K G GQ
Sbjct: 121 HDINFISYGGVLGYCSSTGTQKR-PAIPGNVVGDFAAGGMLGVASILAALINVQKGGDGQ 179
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
ID M +GSAYL ++ ++ LW G NLLDGG HFY+ Y+ KDG+FM+VG LE
Sbjct: 180 QIDLGMAQGSAYLSQFILHQKNEKLWSNGIGNNLLDGGTHFYNIYQCKDGKFMSVGCLEE 239
Query: 240 QFYAQLLAGL---GMT--------EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTD 288
+FY + + GL G++ E +L Q E E ++++++ F+ KT+ EW IFD D
Sbjct: 240 KFYQEFVRGLIAGGLSQQRGQFVLENQLNQTEWENLKSEISKLFESKTRDEWENIFDQYD 299
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS----RTPGTSKITEHN 341
ACV+PV+ L + + + + FI R G + P S + K+ +HN
Sbjct: 300 ACVSPVVELEEYETKNY-LGENVFI-KRNGKIEVNGQPIFSDYQYQIKDIPKVGQHN 354
>gi|430810723|ref|ZP_19437835.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
gi|429496826|gb|EKZ95385.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
Length = 373
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 197/342 (57%), Gaps = 16/342 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD-TVGY------GKKSLC 55
L+G+ +LE AGL P P GM L + GA V+ +D+ QP +D +G GK+S+
Sbjct: 9 LQGLRILEIAGLGPTPISGMTLADMGADVVLVDR--LQPGAEDLDIGRHAIQNRGKRSIA 66
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G+ + L Q D ++E R GVME+L LGPDV NP+L+Y R++G+GQDG
Sbjct: 67 VDLKTQAGIDTVLRLVEQCDAMIEGMRPGVMERLGLGPDVCLARNPKLVYGRMTGWGQDG 126
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHD+NY+ LSG L G P P +L D GGG + +G++ + ++
Sbjct: 127 PLAQAAGHDLNYVALSGALWWSGQPGEAPMSPPSLVGDIGGGAMYLLVGLLAGIMSARET 186
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQVID +V+GSA++ + L + ++ RG +LLD G H+Y TY DG ++ +
Sbjct: 187 GKGQVIDAAIVDGSAHMMNLLLGLKSAGVFRNQRGSSLLD-GPHWYRTYRCADGNYVTIA 245
Query: 236 ALESQFYAQLLAGLGMTEE-----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
A E +F+ LL LG+T++ + Q + A+L F KT+ EW + + TDAC
Sbjct: 246 AAEPRFHKLLLQKLGLTDDPAFSTQHDQTQWPAQHARLAALFAMKTRDEWSALLEGTDAC 305
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
PVL+ +A +HPH V RG + GV+ PAPR S TP
Sbjct: 306 FAPVLNPDEAAAHPHMVARGVY-GEIDGVLQANPAPRFSGTP 346
>gi|312199251|ref|YP_004019312.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
gi|311230587|gb|ADP83442.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
Length = 372
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/366 (41%), Positives = 213/366 (58%), Gaps = 7/366 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH---GAQPFVQDTVGYGKKSLCINLK 59
L+G V+E AG+ P PF M+L++ GA V+R+D+ GA+ D G++S+ I+LK
Sbjct: 4 LRGYRVVELAGIGPGPFAAMMLSDMGAEVLRVDRADSVGAEAPSWDVNARGRRSVGIDLK 63
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
A G + L ++V++E FR GV E+L LGPD P L+Y R++G+GQDGPY+
Sbjct: 64 HADGREAVLRLVEHAEVLIEGFRPGVTERLGLGPDDCLARRPGLVYGRMTGWGQDGPYAQ 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
G DINY+ L+G L+++G P PP N+ DFGGGGL+ A GIV AL E ++SG+GQ
Sbjct: 124 APGRDINYVALAGTLAMVGRPGVPPVPPVNIVGDFGGGGLLLAFGIVCALLESARSGQGQ 183
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D MV+G+A L + + W + RG NLLDGGA FYD YET DGR++++GA++
Sbjct: 184 VVDAAMVDGAALLSGMIHGLRAAGDWGE-RGTNLLDGGAWFYDAYETADGRYLSLGAIDP 242
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
+ QL + + + +L + +T+ EWC FD T C PVL +
Sbjct: 243 KARRQLAELTDVDPGADDRSSWPATKERLAAVIRTRTRDEWCATFDGTSVCFAPVLDPGE 302
Query: 300 ATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGYSD 359
A HPH HRG+F AGVV PAPAPR SRTP P HT E L +G+S
Sbjct: 303 APDHPHIRHRGTFT-EVAGVVQPAPAPRFSRTPPAVAGPPPAPGQ--HTDEALSDWGFSA 359
Query: 360 ANIEEL 365
+ L
Sbjct: 360 EEVTSL 365
>gi|398844588|ref|ZP_10601648.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM84]
gi|398254410|gb|EJN39507.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM84]
Length = 370
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/373 (38%), Positives = 202/373 (54%), Gaps = 34/373 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD-----TVGYGKKSLCIN 57
LKG+ +LE AGL PAPFCGM+L + GA V+ +D+ A D GK+S+ ++
Sbjct: 9 LKGLRILEIAGLGPAPFCGMLLADLGADVVVVDRLAAGDEDLDLGKHAVCNRGKRSIAVD 68
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G+ + L D ++E R GVME+L LGP V NP+LIY R++G+GQ GP
Sbjct: 69 LKSQAGIDTVLGLVENCDALIEGMRPGVMERLGLGPGVCLARNPKLIYGRMTGWGQAGPM 128
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ LSG L G + P P +L D GGG + A+G++ + +G+
Sbjct: 129 AQAAGHDLNYIALSGALWWSGQPGQAPMAPPSLVGDIGGGSMYLAVGLLAGIMNARATGQ 188
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D +V+GSA++ + + + RG +LLD G H+Y TY DG+F++VG++
Sbjct: 189 GQVVDAAIVDGSAHMLNLMLGLKSAGQMHNERGTSLLD-GPHWYRTYRCADGKFISVGSV 247
Query: 238 ESQFYAQLLAGLGMTEEEL------PQ-----HEVETGRAKLTEKFKEKTQAEWCEIFDN 286
E +FY LL LG+ + PQ HE E F +T+ +WC + +
Sbjct: 248 EPRFYKLLLDKLGLAGDPAYAKGHDPQLWPNLHE------GFAELFATRTREQWCALLEG 301
Query: 287 TDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT----PGTSKITEHNP 342
TDAC PVL L +A HPH RG + GV+ PAPR S T PG P
Sbjct: 302 TDACFAPVLDLDEAAQHPHMAARGVY-SRIDGVLQANPAPRFSVTQPAAPGAI------P 354
Query: 343 APGVHTREVLRHF 355
A G + VLR +
Sbjct: 355 ARGQDSEAVLRDW 367
>gi|167568241|ref|ZP_02361115.1| alpha-methylacyl-CoA racemase [Burkholderia oklahomensis C6786]
Length = 377
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 204/375 (54%), Gaps = 15/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AGL PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 4 LHGIRIVEIAGLGPAPFCGMLLADMGADVILVERTAGRDGDPLDLGRRAIFNRGKRSLAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 64 DLKQPAAVDAVLRLVETADALIEGMRPGVMERLGLGPDACVGRNPKLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 124 LADAAGHDINYIGLSGALWYAGQPGDAPLAPPTLVGDLGGGALYLAMGVLAGILDARSRG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
RGQV+D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 184 RGQVVDAAIVDGSANLMNLLLSIHAAGFQPMERGKGLLD-GPHWYGSYRCACGGYVSVGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA LL L + ++ +++ + R +L F + +A W + + TD C
Sbjct: 243 LEPQFYALLLDKLDLAGDDEFRNQYDASRWPRLRERLAAVFASRPRAHWIALMEGTDVCF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS +A SHPH RG + R GV+ APAPR S +P P G + +
Sbjct: 303 APVLSPVEAKSHPHLAARGVYA-ERDGVLQAAPAPRFSGSPNAQPGAV--PRRGGDSAAI 359
Query: 352 LRHFGYSDANIEELI 366
LR G+ I L+
Sbjct: 360 LREAGFGQDEIAALV 374
>gi|410419797|ref|YP_006900246.1| fatty-acyl-CoA racemase [Bordetella bronchiseptica MO149]
gi|427821799|ref|ZP_18988861.1| putative fatty-acyl-CoA racemase [Bordetella bronchiseptica Bbr77]
gi|408447092|emb|CCJ58764.1| putative fatty-acyl-CoA racemase [Bordetella bronchiseptica MO149]
gi|410587064|emb|CCN02094.1| putative fatty-acyl-CoA racemase [Bordetella bronchiseptica Bbr77]
Length = 390
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 217/384 (56%), Gaps = 15/384 (3%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRID---KHGAQPFVQ---DTVGYGKKSLC 55
AL+G+ ++E GL PAPF M+L + GA V+R+ + G P + D + G++SL
Sbjct: 11 ALQGLRIIEMVGLGPAPFAAMMLADHGADVVRVHAAHRKGDFPLLDSRFDVLARGRRSLA 70
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L+ ++ L +D ++E FR GVME++ L P+ + PRL+Y R++G+GQ G
Sbjct: 71 LDLRAPGASDLLLELVGAADGLIEGFRPGVMERMGLAPEECLRRQPRLVYGRMTGWGQQG 130
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHD+NYLGL+G L +G +R P P N ADFGGGG++ A G++ AL
Sbjct: 131 PLARQAGHDLNYLGLTGALHAIGPADRPPPVPLNYVADFGGGGMLLAFGMLAALLAVRGG 190
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GQV+D MV+G+ L + + W R NLLDGGA+FY TY DGRF+AV
Sbjct: 191 APGQVVDAAMVDGAGLLAAMFWGFRAGGGWSDRREGNLLDGGAYFYATYACADGRFLAVA 250
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
+E +F+ L+ LG+ + + H+ + RA+L F + + W +F+++DAC
Sbjct: 251 CVERRFHDLLVERLGL-DPAVYTHDRDPAQWPALRARLAALFATRPRDHWAALFEDSDAC 309
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
VTPVL +A HPH R +I + GV PAPAPRLS T ++ PA G H+ E
Sbjct: 310 VTPVLDWREAAHHPHAAARAGYI-DVEGVTQPAPAPRLSAT--PARQPAAAPAVGAHSVE 366
Query: 351 VLRHFGYSDANIEELIREDVIEET 374
VL +G + + + +I +
Sbjct: 367 VLHEWGLAPERVAGALDSGLIVQA 390
>gi|324516915|gb|ADY46672.1| CaiB/baiF CoA-transferase family protein [Ascaris suum]
Length = 391
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 196/333 (58%), Gaps = 12/333 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+GI V+E AGLAP PFCG++L +FGA V I K G ++ + GK ++LK
Sbjct: 47 LEGIKVVELAGLAPVPFCGLVLADFGAQVTVI-KKGGDELLEQRMTRGKTQKIVDLKSQS 105
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
GL ++ + SDV+L+P+R GV+EK+ L P L K N +LI AR++GYGQ G + AG
Sbjct: 106 GLREVREMCGASDVLLDPYRPGVLEKMGLNPVHLIKDNKKLIVARITGYGQTGEMAPRAG 165
Query: 123 HDINYLGLSGILSLLGWR--NRNPT-PPCNLAADFGGGGLMCALGIVMALFERSKS-GRG 178
HDINY+ L+G+L + +R P PP NL ADF GGGL A G+ ALF R ++ G G
Sbjct: 166 HDINYVSLTGMLPTIAGHSPHRLPYWPPANLLADFAGGGLSAAFGVAAALFRRERNGGIG 225
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
V+D +MVEG AYL S++T +D +W+KP G + Y TY T D ++MAVGAL
Sbjct: 226 GVVDVSMVEGLAYLSSFITAYKDIDLMWNKPYA--WFSGDSPIYRTYRTADDKYMAVGAL 283
Query: 238 ESQFYAQLLAGLGM--TEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
E +F L L + T +L + + + ++ F+ KT+ EW +IF + DACVTPVL
Sbjct: 284 EPKFTKTLFETLNLKSTVNDLLERPEQVTK-EMESVFRSKTRTEWTQIFKDVDACVTPVL 342
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
+ + H+ R FI + PAP++
Sbjct: 343 EMQEVGDFKHHQQRECFI-HEGNKYWGGPAPKI 374
>gi|424853681|ref|ZP_18278039.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
gi|356663728|gb|EHI43821.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
Length = 279
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/261 (47%), Positives = 165/261 (63%), Gaps = 7/261 (2%)
Query: 76 VILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILS 135
+++E F GV E+L LGPDV NPRLI+ R++G+GQ+GP + AGHDI Y+ L+G+L
Sbjct: 1 MLIEGFCPGVTERLGLGPDVALAHNPRLIHGRMTGWGQEGPLAQTAGHDITYISLTGVLH 60
Query: 136 LLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSW 195
+G + P PP N+ DFGGG + GI+ AL ER SG+GQV+D MV+G+ L
Sbjct: 61 AIGRKGERPVPPLNMVGDFGGGSMYLVFGILAALIERPTSGKGQVVDAAMVDGTLALSHM 120
Query: 196 LTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEE 255
+ + W RG N+LD GA +YDTYET DGR+MAVGA+E QFYA L+ GLG+ +
Sbjct: 121 MWSFRGMGRWSDERGVNMLDSGAPYYDTYETADGRYMAVGAVEPQFYALLVEGLGLDPAD 180
Query: 256 LPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGS 311
LP TG +L ++F E KT+ EW IFD T AC TPVL+ ++A +PH RGS
Sbjct: 181 LPAQNDRTGWPQLQKQFAEVFLTKTRDEWAAIFDGTHACTTPVLTFAEAPQNPHIAARGS 240
Query: 312 -FIPNRAGVVAPAPAPRLSRT 331
F +R V PAPR SR+
Sbjct: 241 LFELDR--VTQHRPAPRFSRS 259
>gi|390594626|gb|EIN04036.1| CoA-transferase family III [Punctularia strigosozonata HHB-11173
SS5]
Length = 394
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/389 (40%), Positives = 220/389 (56%), Gaps = 38/389 (9%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKK 60
+ L GI V+EFAGLAPAPF G++L ++GA VIRID+ G Q D + GK+S NLK
Sbjct: 2 LPLDGIRVVEFAGLAPAPFAGLVLADWGADVIRIDRAG-QATSTDVLCRGKRSFAANLKH 60
Query: 61 AKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKS---NPRLIYARLSGYGQDGPY 117
G +++ L + +DV+++PFR GV+E+L P+V N RLIY+R+ G+
Sbjct: 61 TAGKNIVLKLISSADVLIDPFRPGVLERLGFAPEVFLGPEGINKRLIYSRIRGFPIGDTR 120
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHDINYL SG+LS+L ++ P P NL ADFGGGGL+CALGI++ALF+R +G
Sbjct: 121 QNSAGHDINYLAASGVLSMLPGTDK-PMFPLNLLADFGGGGLLCALGIILALFQRQSTGV 179
Query: 178 GQVIDCNMVEGSAYLGSWL---TRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
GQV+ +MV G+ Y+ S+ T + + RG NLLDGGA FYD Y DG +++V
Sbjct: 180 GQVVTTDMVSGTRYISSFPLLNTANMSSPWFSGSRGTNLLDGGAPFYDIYVCSDGGYISV 239
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG-----------------RAKLTEKFKEKTQ 277
G LE QF+ + L LP+ G R + F+ T+
Sbjct: 240 GCLEPQFFTAFIDSL---RSALPRDFSVGGWIPSLASLEDRSQWPQLREYIGTAFRAHTR 296
Query: 278 AEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKI 337
W +FD TD+CV PVLS ++A++ GS IP R ++ A P P +S
Sbjct: 297 DYWAGVFDATDSCVVPVLSPTEASA-----KLGSSIPLRHPCLSAAVNP-----PRSSHQ 346
Query: 338 TEHNPAPGVHTREVLRHFGYSDANIEELI 366
+ APG HT EVL GYSDA+ L+
Sbjct: 347 SHATIAPGRHTHEVLMELGYSDADRRRLV 375
>gi|226349935|ref|YP_002777048.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
gi|226245850|dbj|BAH47117.1| fatty acid-CoA racemase [Rhodococcus opacus B4]
Length = 381
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 195/336 (58%), Gaps = 10/336 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK----HGAQPFVQDTVGYGKKSLCINL 58
L G+ VLE G P F GM+L + GA VI I + P +G G++ + ++L
Sbjct: 4 LHGLRVLELGGRGPVRFSGMLLADLGAEVISICRPRPADDITPLGDAGLGRGRRRVSLDL 63
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
+ G V+ +A++ D ++E F V E L +GP +NPRL+Y R++G+GQ GP +
Sbjct: 64 RTHAGRRVVLAIASRVDAVIEGFLPEVAESLGVGPADCMAANPRLVYGRITGWGQTGPLA 123
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+ GHDIN+L +SG+L+ LG P PP NL AD GGG ++ LG+ A+ E SG G
Sbjct: 124 NQPGHDINFLAVSGVLAHLGRAGTLPAPPMNLLAD-GGGAMLLTLGVTAAVLEARASGMG 182
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +M+EG A L + ++ W++ RG NL D GA FYD Y DGR +AVGA+E
Sbjct: 183 QVVDTSMLEGHALLSTMSHEMRNEGRWNEDRGSNLNDSGAPFYDVYPASDGRLVAVGAVE 242
Query: 239 SQFYAQLLA--GLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
+++ LLA +G + + R +L F ++TQ+EW E + AC++PVL+
Sbjct: 243 ERYWKFLLALLDIGDGPDRWDRATWPWWRERLGAAFAQRTQSEWSEHAEAAGACISPVLT 302
Query: 297 LSQATSHPHNVHRGSFIPNRAG-VVAPAPAPRLSRT 331
++A HPHN RG F RAG + P+PAPR SRT
Sbjct: 303 GAEAADHPHNRERGVF--TRAGDDLLPSPAPRFSRT 336
>gi|410474755|ref|YP_006898036.1| racemase [Bordetella parapertussis Bpp5]
gi|408444865|emb|CCJ51647.1| putative racemase [Bordetella parapertussis Bpp5]
Length = 351
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 178/300 (59%), Gaps = 8/300 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-------QPFVQDTVGYGKKSLC 55
L G+ V+EF + PAP C M+L + GATVIR+++ +P + + + +
Sbjct: 4 LAGLKVVEFPAIGPAPMCAMLLADMGATVIRLERQQPSADLGVERPLKYNLLLRNRPGIS 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK +G + L +DV+LE FR G ME++ GPD + NPRL+Y R++G+GQ G
Sbjct: 64 VDLKAPEGAQFAQALLESADVLLEGFRPGTMERMGFGPDACLRKNPRLVYGRMTGWGQTG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
PY++MAGHD+NY+ ++G L +G + + PTPP NL DFGGG L A+G++ A+F +
Sbjct: 124 PYAAMAGHDLNYIAMTGALDAIGRKGQPPTPPLNLVGDFGGGALYLAMGVLAAVFAARGT 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQV+D MV+G+A L + L++ RG N+LD GA +YD Y DG+++++
Sbjct: 184 GKGQVVDAAMVDGAASLMTPFFGMAAAGLFNAERGTNVLDSGAPYYDVYRCADGKYLSIA 243
Query: 236 ALESQFYAQLLAGLGMTEEELPQH-EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+E++F L + Q + + R + + +TQA+WCE FD TDACV P
Sbjct: 244 PIEARFRRIFFEKLDLDAPAGDQRADWDALREAIAARIATRTQAQWCECFDGTDACVAPA 303
>gi|167568137|ref|ZP_02361053.1| alpha-methylacyl-CoA racemase [Burkholderia oklahomensis EO147]
Length = 377
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 204/375 (54%), Gaps = 15/375 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY------GKKSLCI 56
L GI ++E AGL PAPFCGM+L + GA VI +++ + +G GK+SL +
Sbjct: 4 LHGIRIVEIAGLGPAPFCGMLLADMGADVILVERTAGRDGDPLDLGRRAIFNRGKRSLAL 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + + L +D ++E R GVME+L LGPD NP+L+Y R++G+GQDGP
Sbjct: 64 DLKQPAAVDAVLRLVETADALIEGMRPGVMERLGLGPDACVARNPKLVYGRMTGWGQDGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHDINY+GLSG L G P P L D GGG L A+G++ + + G
Sbjct: 124 LADAAGHDINYIGLSGALWYAGQPGDVPLAPPTLVGDLGGGALYLAMGVLAGILDARSRG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+GSA L + L RG+ LLD G H+Y +Y G +++VGA
Sbjct: 184 KGQVVDAAIVDGSANLMNLLLSIHAAGFQPMERGKGLLD-GPHWYGSYRCACGGYVSVGA 242
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDACV 291
LE QFYA LL L + ++ +++ + R +L F + +A W + + TD C
Sbjct: 243 LEPQFYALLLDKLDLAGDDEFRNQYDASRWPRLRERLAAVFASRPRAHWIALMEGTDVCF 302
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS +A SHPH RG + R GV+ APAPR S +P P G + +
Sbjct: 303 APVLSPVEAKSHPHLAARGIYA-ERDGVLQAAPAPRFSGSPNAQPGAV--PRRGGDSAAI 359
Query: 352 LRHFGYSDANIEELI 366
LR G+ I L+
Sbjct: 360 LREAGFGQDEIAALV 374
>gi|148554890|ref|YP_001262472.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
gi|148500080|gb|ABQ68334.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphingomonas
wittichii RW1]
Length = 363
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 194/339 (57%), Gaps = 7/339 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLC-INLKKA 61
L GI ++E + + P I+ + GATVIR+D+ ++ + + +LK+
Sbjct: 5 LHGIRIVEISAVGPVALFATIMADLGATVIRVDRPSHFEGRKEGAHVANRPVVDRDLKQP 64
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+ ++ + +L +DV++E +R GVME+L LGPDV +NP+L++AR++G+GQ GP++
Sbjct: 65 ESVAFVLDLVRGADVLIEGYRPGVMERLGLGPDVCLAANPKLVFARMTGWGQQGPFAGEP 124
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL L+G L+ +G + P PP NL AD+GGG + +G++ AL +SG+GQVI
Sbjct: 125 GHDINYLALTGALAAIG-TEQEPIPPLNLIADYGGGSMFACVGVLAALLSALRSGKGQVI 183
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D M++G L S LW+ R N LDG A +Y Y KDG+++A GALE +F
Sbjct: 184 DVAMIDGVGSLFSMQYERYAQGLWNNARRTNTLDGAAPYYGCYPCKDGKWVAAGALEMKF 243
Query: 242 YAQLLAGLGMTE--EELPQHEVETG--RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
+ +G+ E EE R ++ E FK T+ EW E + C TP+L +
Sbjct: 244 RRAMANTIGVPELGEESSSDPASWPQLRTRVAEAFKTATRDEWMERMYGRETCCTPILDM 303
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK 336
+A HPHNV R F ++ G V P+PAPR S TP K
Sbjct: 304 DEAPHHPHNVARTGFFQDQGGWV-PSPAPRFSATPAERK 341
>gi|427813496|ref|ZP_18980560.1| putative racemase [Bordetella bronchiseptica 1289]
gi|410564496|emb|CCN22043.1| putative racemase [Bordetella bronchiseptica 1289]
Length = 373
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 198/336 (58%), Gaps = 11/336 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L+G V+E AG+ PAP M+L + GA V+RI++ A+P + + + +
Sbjct: 4 LQGTRVVELAGIGPAPMACMLLADLGAEVVRIERAEPVELGVARPARYNLLMRNRCLVAA 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + +L ++DV++E FR GV E+L LGP NPRL+Y R++G+GQ GP
Sbjct: 64 DLKQPAMVEQALDLVARADVLVEGFRPGVAERLGLGPQACQARNPRLVYGRMTGWGQSGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+GI+ +G + P+ P L D GG L ALG++ AL ER +SG
Sbjct: 124 LAQAAGHDLNYVALTGIIHAIGRAGQPPSIPLALTGDMAGGALYLALGVLAALLERGRSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVID +V+G+A L + LW RG N+LDGGA FYD YE DG +++VG
Sbjct: 184 LGQVIDAAIVDGAASLATVFYGLCAAGLWQDARGTNILDGGAPFYDVYECADGAWISVGP 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVET----GRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E++FYAQLL L + +++ + R + +F+ +T+ WC + + +D C
Sbjct: 244 IEARFYAQLLEKLDLRAQDVGARDDRAAWPRARMAIASRFRTRTRDAWCALLEGSDVCFA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
PVLS ++A +H H RG+F+ GVV PAPAPR
Sbjct: 304 PVLSFAEAPAHAHLKARGTFV-EVDGVVQPAPAPRF 338
>gi|343924664|ref|ZP_08764208.1| alpha-methylacyl-CoA racemase [Gordonia alkanivorans NBRC 16433]
gi|343765464|dbj|GAA11134.1| alpha-methylacyl-CoA racemase [Gordonia alkanivorans NBRC 16433]
Length = 369
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 199/350 (56%), Gaps = 35/350 (10%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQP-----FVQDTVGY--GKKSLC 55
L G+ V+E GL P P M+L + GA VIRI + G + V G ++S+
Sbjct: 5 LAGVRVVEMPGLGPTPHAAMMLADLGADVIRIRRPGPETPGPDGIVDADAGLYRSRRSVE 64
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+LK L+ ++ + ++D+++E FR GVME+L LGP++ C +L+YAR++G+GQDG
Sbjct: 65 ADLKDPADLNRIREMIRRADILIEGFRPGVMERLGLGPEI-CDDATQLVYARMTGWGQDG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
+ +AGHDINYL ++G+L +G P PP +LA DFGGG ++ +G++ AL +RS++
Sbjct: 124 DRAMLAGHDINYLAVTGVLEAMGPAGSPPVPPLSLAGDFGGGSMLLVVGVLAALHDRSRT 183
Query: 176 GRGQVIDCNMVEGSAYL----------GSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYE 225
GRGQV+D MV+G+ L G W++R++ NLLDG A FY TYE
Sbjct: 184 GRGQVVDAAMVDGAGLLAQLQWSWKAAGRWVSRSEG----------NLLDGSAPFYATYE 233
Query: 226 TKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQA----EWC 281
DGRF+AVGALE +F+ L+ LG+ +LP ++ + A EW
Sbjct: 234 CADGRFVAVGALEEKFWRNLIGTLGLA--DLPDRWDRAHWPVISAALAARFAARTRDEWA 291
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
F DAC+TPVL +A + P R S++ V PAPAPR SRT
Sbjct: 292 AEFAGVDACLTPVLDFDEAAADPVAQQRVSYV-TVDDAVQPAPAPRFSRT 340
>gi|33595737|ref|NP_883380.1| racemase [Bordetella parapertussis 12822]
gi|33600261|ref|NP_887821.1| racemase [Bordetella bronchiseptica RB50]
gi|412339491|ref|YP_006968246.1| racemase [Bordetella bronchiseptica 253]
gi|33565816|emb|CAE36360.1| putative racemase [Bordetella parapertussis]
gi|33567859|emb|CAE31773.1| putative racemase [Bordetella bronchiseptica RB50]
gi|408769325|emb|CCJ54101.1| putative racemase [Bordetella bronchiseptica 253]
Length = 373
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 198/336 (58%), Gaps = 11/336 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L+G V+E AG+ PAP M+L + GA V+RI++ A+P + + + +
Sbjct: 4 LQGTRVVELAGIGPAPMACMLLADLGAEVVRIERAEPVELGVARPARYNLLMRNRCLVAA 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + +L ++DV++E FR GV E+L LGP NPRL+Y R++G+GQ GP
Sbjct: 64 DLKQPAMVEQALDLVARADVLVEGFRPGVAERLGLGPQACQARNPRLVYGRMTGWGQSGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+GI+ +G + P+ P L D GG L ALG++ AL ER +SG
Sbjct: 124 LAQAAGHDLNYVALTGIIHAIGRAGQPPSIPLALTGDMAGGALYLALGVLAALLERGRSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVID +V+G+A L + LW RG N+LDGGA FYD YE DG +++VG
Sbjct: 184 LGQVIDAAIVDGAASLATVFYGLCAAGLWQDARGTNILDGGAPFYDVYECADGAWISVGP 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVET----GRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E++FYAQLL L + +++ + R + +F+ +T+ WC + + +D C
Sbjct: 244 IEARFYAQLLEKLELRAQDVGARDDRAAWPRARMAIASRFRTRTRDAWCALLEGSDVCFA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
PVLS ++A +H H RG+F+ GVV PAPAPR
Sbjct: 304 PVLSFAEAPAHAHLKARGTFV-EVDGVVQPAPAPRF 338
>gi|404214793|ref|YP_006668988.1| putative acyl-CoA transferases/carnitine dehydratase [Gordonia sp.
KTR9]
gi|403645592|gb|AFR48832.1| putative acyl-CoA transferases/carnitine dehydratase [Gordonia sp.
KTR9]
Length = 356
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 194/328 (59%), Gaps = 11/328 (3%)
Query: 13 GLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDTVGYGKKSLCINLKKAKGLS 65
GL P P M+L + GA V+RI + G P + ++S+ +++ L+
Sbjct: 3 GLGPTPHACMLLADLGADVLRIRRPGPDLPGPDGIPAADAGLYRSRRSVDADVRDPADLA 62
Query: 66 VMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDI 125
++ L ++D+++E FR GVME+L LGP++ C PRLIYAR++G+GQDG + AGHDI
Sbjct: 63 RIRELIMRADIVVEGFRPGVMERLGLGPEI-CSDAPRLIYARMTGWGQDGDRAPSAGHDI 121
Query: 126 NYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNM 185
NYL +SG+L +G P PP +L DFGGG ++ +G++ AL +R+++GRGQVID M
Sbjct: 122 NYLAVSGVLEAMGPAGAPPVPPLSLVGDFGGGSMLLVVGVLAALHDRTRTGRGQVIDAAM 181
Query: 186 VEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQL 245
V+G+ L + + W NLLDG A FY TY DGRF+AVGALE +F+ L
Sbjct: 182 VDGAGLLAALQWSWKAAGRWGSRDQGNLLDGSAPFYTTYRCADGRFIAVGALEEKFWRNL 241
Query: 246 LAGLGMTE--EELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSH 303
+ LG+ + + + A L +F +T+ +W +F + DACVTPVL +A +
Sbjct: 242 VDTLGVGDLPDRWDRASWPVIGAALQARFGTRTRDDWGSVFADVDACVTPVLDFDEAAAD 301
Query: 304 PHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
P V RGSF+ +APAPAPR SRT
Sbjct: 302 PVAVQRGSFV-RVDDAIAPAPAPRFSRT 328
>gi|410419024|ref|YP_006899473.1| racemase [Bordetella bronchiseptica MO149]
gi|427824304|ref|ZP_18991366.1| putative racemase [Bordetella bronchiseptica Bbr77]
gi|408446319|emb|CCJ57987.1| putative racemase [Bordetella bronchiseptica MO149]
gi|410589569|emb|CCN04642.1| putative racemase [Bordetella bronchiseptica Bbr77]
Length = 373
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 199/336 (59%), Gaps = 11/336 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L+G V+E AG+ PAP M+L + GA V+RI++ A+P + + + +
Sbjct: 4 LQGTRVVELAGIGPAPMACMLLADLGAEVVRIERAEPVELGVARPARYNLLMRNRCLVAA 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + +L ++DV++E FR GV E+L LGP NPRL+Y R++G+GQ GP
Sbjct: 64 DLKQPAMVEQALDLVARADVLVEGFRPGVAERLGLGPQACQARNPRLVYGRMTGWGQSGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+GI+ +G + P+ P L D GG L ALG++ AL ERS+SG
Sbjct: 124 LAQAAGHDLNYVALTGIIHAIGRAGQPPSIPLALTGDMAGGALYLALGVLAALLERSRSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVID +V+G+A L + LW RG N+LD GA FYD YE DG +++VG
Sbjct: 184 LGQVIDAAIVDGAASLATVFYGLCAAGLWQDARGTNILDSGAPFYDVYECADGAWISVGP 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG--RAKL--TEKFKEKTQAEWCEIFDNTDACVT 292
+E++FYAQLL L + +++ + RAK+ +F+ +T+ WC + + +D C
Sbjct: 244 IEARFYAQLLEKLDLRAQDVGARDDRAAWPRAKMAIASRFRTRTRDAWCALLEGSDVCFA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
PVLS +A +H H RG+F+ GVV PAPAPR
Sbjct: 304 PVLSFEEAPAHAHLKARGTFV-EVDGVVQPAPAPRF 338
>gi|119715059|ref|YP_922024.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardioides
sp. JS614]
gi|119535720|gb|ABL80337.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardioides
sp. JS614]
Length = 379
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 201/374 (53%), Gaps = 23/374 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQDT--VGYGKKSLCIN 57
L G+ V+E AG+ P PFCGM+L + GA V+ I++ G + + D + ++SL +
Sbjct: 5 LAGMRVIELAGIGPGPFCGMLLGDLGADVVVIERPLPAGPEAALVDNGMLRRNRRSLVAD 64
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK ++ +L ++D+I E R GV E+L +GP+ NPR++Y R++G+GQ GP
Sbjct: 65 LKSPGSADMVLDLVREADIIFEGMRPGVAERLGVGPEACLAVNPRVVYGRMTGWGQHGPL 124
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ AGHD+NY+ ++G+L+L+G + P PP NL DFGGG ++ A+G++ A+ +G
Sbjct: 125 ARRAGHDLNYISMTGVLNLIG--HDRPAPPLNLVGDFGGGAMLLAVGLLAAVTHARTTGE 182
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
GQV+D M +G+ L + W R N+L+ G+ F Y+ +DG ++AV +
Sbjct: 183 GQVVDAAMFDGTNLLMTMFWDAYSKGSWIDRRASNILNDGSPFNTVYQCRDGSWLAVAPI 242
Query: 238 ESQFYAQLLA---------GLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTD 288
E QF ++++ LG+ E P E AKL F + + EW + +D
Sbjct: 243 EPQFRERMMSLMELTIEPGELGLDREMWPALE-----AKLRTAFASRDRDEWLRLLSGSD 297
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
CVTPVL L + H RGSF+P G PAPAPR S T T PA G T
Sbjct: 298 TCVTPVLGLDEVPLTAHARARGSFLPAPRGGQQPAPAPRFSVT--TPADPALPPAYGADT 355
Query: 349 REVLRHFGYSDANI 362
VL GYS I
Sbjct: 356 DTVLAEIGYSPERI 369
>gi|115535051|ref|NP_509517.2| Protein C24A3.4 [Caenorhabditis elegans]
gi|351050775|emb|CCD65383.1| Protein C24A3.4 [Caenorhabditis elegans]
Length = 343
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/336 (42%), Positives = 194/336 (57%), Gaps = 13/336 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E GLAP PFCGMIL +FGA V IDK P V+ + GK +L+K++
Sbjct: 5 LSGIKVVELGGLAPVPFCGMILADFGADVTVIDKK--NPTVEQRMNRGKSMKEFDLRKSE 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ +++L SDV+L+P+R G +EK+ L P L N LI R+SGYGQ G S AG
Sbjct: 63 DIKKVRDLCRTSDVLLDPYRPGTLEKMGLDPLSLWNDNKGLIICRISGYGQTGRMSQEAG 122
Query: 123 HDINYLGLSGIL-SLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS-GRGQV 180
HDINY+ +SG+L + G P PP N+ ADF GGGL A GIV A+ R+ + G+G V
Sbjct: 123 HDINYVAMSGMLPTFAGAEASRPWPPVNMLADFAGGGLSAAFGIVSAIHARTHNGGQGCV 182
Query: 181 IDCNMVEGSAYLGSWLT--RTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
+DC+M EG AYL S++ Q DK G Y TY+TKDG+FMAVG LE
Sbjct: 183 LDCSMTEGVAYLASFVQYYYEQSHLFTDKYAA---FTGECPIYRTYKTKDGKFMAVGPLE 239
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+F+ ++ LG+ ++L E E L E F +KT+ EW IF+ D CVTPVL +
Sbjct: 240 PKFHQKMFQVLGVNGDDL-FSEPERITKVLEETFLQKTRDEWSSIFEGQDCCVTPVLDIH 298
Query: 299 QATSHPHNVHRGSFIPNR--AGVVAPAPAPRLSRTP 332
+ ++ +V R +F N P+PR+ +TP
Sbjct: 299 EVGTYGQHVDRQNFTKNDKFGSTWIAKPSPRV-KTP 333
>gi|410474100|ref|YP_006897381.1| racemase [Bordetella parapertussis Bpp5]
gi|408444210|emb|CCJ50926.1| putative racemase [Bordetella parapertussis Bpp5]
Length = 373
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 197/336 (58%), Gaps = 11/336 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L+G V+E AG+ PAP M+L + GA V+RI++ A+P + + + +
Sbjct: 4 LQGTRVVELAGIGPAPMACMLLADLGAEVVRIERAEPVELGVARPARYNLLMRNRCLVAA 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + +L ++DV++E FR GV E+L LGP NPRL+Y R++G+GQ GP
Sbjct: 64 DLKQPAMVEQALDLVARADVLVEGFRPGVAERLGLGPQACQARNPRLVYGRMTGWGQSGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+GI+ +G + P+ P L D GG L ALG++ AL ER +SG
Sbjct: 124 LAQAAGHDLNYVALTGIIHAIGRAGQPPSIPLALTGDMAGGALYLALGVLAALLERGRSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVID +V+G+A L + LW RG N+LDGGA FYD YE DG +++VG
Sbjct: 184 LGQVIDAAIVDGAASLATVFYGLCAAGLWQDARGTNILDGGAPFYDVYECADGAWISVGP 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVET----GRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E++FYAQLL L + +++ + R + +F+ +T+ WC + + +D C
Sbjct: 244 IEARFYAQLLEKLELRAQDVGARDDRAAWPRARMAIASRFRTRTRDAWCALLEGSDVCFA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
PVLS +A +H H RG+F+ GVV PAPAPR
Sbjct: 304 PVLSFEEAPAHAHLKARGTFV-EVDGVVQPAPAPRF 338
>gi|427820715|ref|ZP_18987778.1| putative racemase, partial [Bordetella bronchiseptica D445]
gi|410571715|emb|CCN19955.1| putative racemase, partial [Bordetella bronchiseptica D445]
Length = 350
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 199/336 (59%), Gaps = 11/336 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L+G V+E AG+ PAP M+L + GA V+RI++ A+P + + + +
Sbjct: 4 LQGTRVVELAGIGPAPMACMLLADLGAEVVRIERAEPVELGVARPARYNLLMRNRCLVAA 63
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK+ + +L ++DV++E FR GV E+L LGP NPRL+Y R++G+GQ GP
Sbjct: 64 DLKQPAMVEQALDLVARADVLVEGFRPGVAERLGLGPQACQARNPRLVYGRMTGWGQSGP 123
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+GI+ +G + P+ P L D GG L ALG++ AL ERS+SG
Sbjct: 124 LAQAAGHDLNYVALTGIIHAIGRAGQPPSIPLALTGDMAGGALYLALGVLAALLERSRSG 183
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
GQVID +V+G+A L + LW RG N+LD GA FYD YE DG +++VG
Sbjct: 184 LGQVIDAAIVDGAASLATVFYGLCAAGLWQDARGTNILDSGAPFYDVYECADGAWISVGP 243
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETG--RAKL--TEKFKEKTQAEWCEIFDNTDACVT 292
+E++FYAQLL L + +++ + RAK+ +F+ +T+ WC + + +D C
Sbjct: 244 IEARFYAQLLEKLDLRAQDVGARDDRAAWPRAKMAIASRFRTRTRDAWCALLEGSDVCFA 303
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
PVLS +A +H H RG+F+ GVV PAPAPR
Sbjct: 304 PVLSFEEAPAHAHLKARGTFV-EVDGVVQPAPAPRF 338
>gi|374367466|ref|ZP_09625529.1| fatty acid-CoA racemase [Cupriavidus basilensis OR16]
gi|373100992|gb|EHP42050.1| fatty acid-CoA racemase [Cupriavidus basilensis OR16]
Length = 351
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 191/338 (56%), Gaps = 12/338 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRI------DKHGAQPFVQDTVGYGKKSLCI 56
L G+ V+EFA + PF ++L + GA V+RI D D + + S+ +
Sbjct: 8 LAGMRVVEFATVGAVPFAALLLVQHGAEVLRIAPPTPRDLGVPVAAAGDIATWDRDSVQL 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK G +L +DV++E FR GVME+L LGP + N RLIY RL+G+GQ GP
Sbjct: 68 DLKTEAGRGEALDLVASADVLIEGFRPGVMERLGLGPQACHRRNHRLIYGRLTGWGQTGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
++++AGHDINY+ ++G L+ +G P PP N+ D GG L +GI+ A ++ S+
Sbjct: 128 WANVAGHDINYIAMTGALAAIGEAGGRPVPPLNVLGDLAGGALYLVVGILAAGWDESRKQ 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+G VID MV+GS + S + W RG N++DGG +Y TYET DG+FMAVGA
Sbjct: 188 QGCVIDAAMVDGSLHTLSAVFGRLAQGAWHSERGGNVIDGGVPWYRTYETADGKFMAVGA 247
Query: 237 LESQFYAQLLAGLGMTEEELPQHEVETGRAKL----TEKFKEKTQAEWCEIFDNTDACVT 292
+E +FY +AGLG E ELP A+L + +FK ++ W IFD TD CVT
Sbjct: 248 IEQRFYDAFVAGLGFAEVELPPRSERRNWAELERRFSARFKMASREHWERIFDGTDTCVT 307
Query: 293 PVLSLSQATSHP-HNVHRGSFIPNRAGVVAPAPAPRLS 329
PVL L++A SH H R + + A P APR +
Sbjct: 308 PVLDLTEALSHRIHQARRDGQLAD-AAEARPHVAPRFN 344
>gi|145527282|ref|XP_001449441.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417029|emb|CAK82044.1| unnamed protein product [Paramecium tetraurelia]
Length = 360
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 202/356 (56%), Gaps = 20/356 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L I VLEFAGLAP F GM+L ++GA V + +H +QP + GKKS+ +LK +
Sbjct: 2 LSQIKVLEFAGLAPTVFIGMVLADYGAQVTILSRHDSQP-QNSPMNRGKKSMTFDLKNKQ 60
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ ++K++ S+++++P+R GV+E+L L + + NP+LIY R++G+GQ+ P AG
Sbjct: 61 DIEIVKHMIKDSNILIDPYRPGVLERLGLSYKICSEINPKLIYCRVTGFGQNSPLKEKAG 120
Query: 123 HDINYLGLSGILSLLG--WRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQV 180
HDIN++ G+L + P P N+ DF GG++ I+ AL K G GQ
Sbjct: 121 HDINFISYGGVLGYCASTGSQKRPAIPGNVIGDFAVGGMLGVASILAALINVQKGGSGQQ 180
Query: 181 IDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
ID M +G+AYL ++ ++ LW G N+LDGG HFY+ Y+ KDG+FM+VG LE +
Sbjct: 181 IDLGMAQGAAYLSQFILHQKNEKLWSNGIGNNVLDGGTHFYNIYQCKDGKFMSVGCLEEK 240
Query: 241 FYAQLLAGL---GMT--------EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDA 289
FY + + GL G++ E +L Q E E + +++ F+ KT+ +W +IFD DA
Sbjct: 241 FYQEFVKGLIAGGLSQQRGQFILENQLNQAEWENLKQEISTLFESKTRDQWEKIFDQFDA 300
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS----RTPGTSKITEHN 341
CV+PV+ L + + + + F+ R G + P S + KI +HN
Sbjct: 301 CVSPVVDLEEYETKNY-LGENVFV-KRNGKIEVNGQPIFSDYQFQFKDIPKIGQHN 354
>gi|340500009|gb|EGR26917.1| hypothetical protein IMG5_204920 [Ichthyophthirius multifiliis]
Length = 383
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 216/379 (56%), Gaps = 38/379 (10%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-PFVQDT----VGYGKKSLC 55
+ L+G+ V+EF GLAP F G IL++FGA V I++ Q P DT + GK+SL
Sbjct: 3 LPLQGLKVIEFEGLAPTVFLGFILSDFGAQVTIINRENNQNPIGIDTDQTYLNRGKQSLI 62
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
IN K + ++K + N++D++++ FR GV+EK+ +GP + N +LIYAR++GYGQ G
Sbjct: 63 INFKNPLHIQILKQMINKADILIDCFRPGVLEKVGIGPQDI--QNDKLIYARVTGYGQKG 120
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P S +AGHDINYLG SGILS PP N+ ADF GG ALGI++AL+ER K+
Sbjct: 121 PLSKLAGHDINYLGFSGILSTFSPFQYRHDPPNNILADFAAGGGFGALGILLALYERVKT 180
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G+GQ +D ++ AY+GS+L Q LW+K RG+N LDGGA FY TY+ D +++ VG
Sbjct: 181 GKGQTVDISLTHCVAYMGSFLHNMQIKGLWNKQRGQNTLDGGAPFYRTYKCLDNKYLTVG 240
Query: 236 ALESQFYAQLLAGLGMTEEEL-PQHEVETGR----AKLTEK-FKEKTQAEWCEIFDNTDA 289
+ES FY + L GL + +EL Q + + + + L E F +KT+ EW EIF D
Sbjct: 241 CIESTFYDRFLQGLDIQNKELFLQQQFDQDKWLQTSTLFENIFIQKTRDEWIEIFLPLDC 300
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPA------------PAPRLSRTPGTSKI 337
CV PVL +S+ +PNR ++ P L+ +
Sbjct: 301 CVGPVLEISE-------------LPNRKDILNIVIKDQKNNNFQFIKQPLLTNDQNQQQE 347
Query: 338 TEHNPAPGVHTREVLRHFG 356
+ P G +T ++L+ +
Sbjct: 348 FKMIPKRGENTLQILQQYN 366
>gi|378718024|ref|YP_005282913.1| alpha-methylacyl-CoA racemase [Gordonia polyisoprenivorans VH2]
gi|375752727|gb|AFA73547.1| alpha-methylacyl-CoA racemase [Gordonia polyisoprenivorans VH2]
Length = 346
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 192/339 (56%), Gaps = 11/339 (3%)
Query: 22 MILNEFGATVIRIDKHGAQPFV-----QDTVGYGKKSLCINLKKAKGLSVMKNLANQSDV 76
M+L + GA V+RID+ GA+ Q+ + GK+S+ +NLK + L + + L ++DV
Sbjct: 1 MLLADLGADVVRIDRPGARGIFPGSAEQNLLNRGKRSIQLNLKDSDDLGMARQLVARADV 60
Query: 77 ILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSL 136
++E FR G E++ LGP P ++Y R++G+GQDGP + AGHD+NY+ +G+L
Sbjct: 61 VIEGFRPGASERMGLGPGDCLALAPHVVYGRMTGWGQDGPIARTAGHDLNYIARTGVLHA 120
Query: 137 LGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWL 196
+G + P P N+ DFGGGG+ +GI+ AL E + GQVID +V+G ++L +
Sbjct: 121 IGPASGPPQIPLNMIGDFGGGGMYLVVGILAALHEVDRGQPGQVIDAAIVDGVSHLLAGT 180
Query: 197 TRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL 256
+ W R N+LDG A +Y YET DGR++AVGA+E QFY + LAGLG+ +
Sbjct: 181 HARLASGTWVDRRESNVLDGAAPYYRVYETSDGRYLAVGAIEPQFYREFLAGLGLAIDPE 240
Query: 257 PQHEVETGRA---KLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI 313
Q + +T A ++ + + + W +FD TDACV PV SL +A H RGS I
Sbjct: 241 TQDDRDTWPAVIDAISARIRSDSLDHWLGVFDGTDACVAPVRSLREAAHDTHLAERGSLI 300
Query: 314 PNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
GV+ P APR SR P PG HT V+
Sbjct: 301 -EVDGVLQPGSAPRFSRHQANG--FTRPPRPGEHTHAVI 336
>gi|359769728|ref|ZP_09273484.1| putative fatty acid-CoA racemase [Gordonia polyisoprenivorans NBRC
16320]
gi|359312903|dbj|GAB26317.1| putative fatty acid-CoA racemase [Gordonia polyisoprenivorans NBRC
16320]
Length = 389
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 189/329 (57%), Gaps = 8/329 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+E AG+ P PF GM+L + GA VI +D+ G P+ D + ++ + ++LK
Sbjct: 8 LDGVRVIELAGIGPGPFAGMLLADMGAEVITVDRPGGNPWAVAGHDILFRSRRHVAVDLK 67
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ +G V++ L +D + E FR GV E+L +GP N L+Y R++G+GQ GP +S
Sbjct: 68 RPEGAEVVRRLCVGADGLFETFRPGVAERLGVGPQDCLAVNSDLVYGRMTGWGQTGPLAS 127
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
GHDINY+ L+G L +G + P P NL DFGGGG ALG++ + G G+
Sbjct: 128 TPGHDINYIALTGALHAIGRAGQAPVAPLNLVGDFGGGGTFLALGMLAGIVSARAGGGGR 187
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D M++G++ L S + + + RG NLLD G+ FYD Y T+DG+++++GA+E
Sbjct: 188 VVDAAMIDGASALMSMFHSYRAEGDYTEERGTNLLDTGSFFYDVYPTRDGKWVSIGAIED 247
Query: 240 QFYAQLLAGLGMTEEELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
QF+ +L L + E H + R L ++ E ++ E +F + C PVL
Sbjct: 248 QFWIELCDVLDLPESMRTGHRDPERFDEYRKVLADRIAEHSRDELDRLFAGRNTCYAPVL 307
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAP 324
+LS+ HPH++ RG+F+ + G V PAP
Sbjct: 308 ALSETADHPHHIERGTFV-SIDGAVQPAP 335
>gi|116748963|ref|YP_845650.1| alpha-methylacyl-CoA racemase [Syntrophobacter fumaroxidans MPOB]
gi|116698027|gb|ABK17215.1| Alpha-methylacyl-CoA racemase [Syntrophobacter fumaroxidans MPOB]
Length = 391
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 212/396 (53%), Gaps = 34/396 (8%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ---DTVGYG-------- 50
AL G TVL+ + L P PFC M+L + GA VI+I++ G +++ VG G
Sbjct: 4 ALCGFTVLDLSRLLPGPFCSMLLADLGADVIKIEEPGRGDYIRWWPPRVGGGSGYHVVLN 63
Query: 51 --KKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+SL +NLK +G + ++LA +DV+LE FR GVM+K+ LG + L NP +++ +
Sbjct: 64 RNKRSLTLNLKAPEGKDIFRSLAKNADVVLESFRPGVMDKMGLGYERLAAVNPGIVFCAI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
SGYG GP + AGHD+NYL SG+LS G R PT AD GGGGL A GI+ A
Sbjct: 124 SGYGAYGPMALKAGHDVNYLARSGVLSYSG--RRAPTMTGVQIADLGGGGLPAAFGILAA 181
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPR---GENLLDGGAHFYDTYE 225
L R+++G+GQ +D +M +GS W L D+ +++L+ G Y+ Y
Sbjct: 182 LLARTRTGKGQFVDVSMTDGSLL---WNCLRWGKLLGDRAVPAPADDMLNHGFACYNLYS 238
Query: 226 TKDGRFMAVGALESQFYAQLLAGLGMTEEELPQ------HEVETGRAKLTEKFKEKTQAE 279
T+D R+M++GALE QF+ +G E + PQ H+VE + +L F +T+AE
Sbjct: 239 TRDKRYMSLGALEPQFWKAFCERVGHPEWDTPQYFEPGSHQVEL-KHRLEALFASRTRAE 297
Query: 280 WCEIFDNTDACVTPVLSLSQATSHPHNVHRG---SFIPNRAGVVAP-APAPRLSRTPGTS 335
W E+F + D C PVL L++ P R I + G PRLS TPG
Sbjct: 298 WVEVFKDADCCCEPVLDLAEVMDDPQVRAREMVVDLIHDSWGAYRQLGICPRLSSTPG-- 355
Query: 336 KITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
I H P G HT +L GY IE L R+ V+
Sbjct: 356 GIRSHAPELGEHTDRILCGLGYDSTEIERLRRQGVV 391
>gi|84687650|ref|ZP_01015524.1| L-carnitine dehydratase/bile acid-inducible protein F
[Maritimibacter alkaliphilus HTCC2654]
gi|84664327|gb|EAQ10817.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodobacterales bacterium HTCC2654]
Length = 365
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 203/363 (55%), Gaps = 13/363 (3%)
Query: 6 ITVLEFAGLAPAPFCGMILNEFGATVIRID-KHGAQPFVQ-----DTVGYGKKSLCINLK 59
+ ++EF + P PFC M++ + GATVIR++ K A V+ D + + ++LK
Sbjct: 1 MKIVEFGAIGPGPFCAMLMADLGATVIRLERKQDAGLGVKRDLRFDLTKRNRPMIALDLK 60
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L + +D ++E FR G ME+L+LGPD +NP LIY R++G+GQ GP +
Sbjct: 61 SPEDRDSALELVSGADALIEGFRPGAMERLRLGPDDCLAANPALIYGRMTGWGQTGPLAQ 120
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
GHDINYL LSG LS++G + + P P NL +D GGG L A G++ A+ ++G GQ
Sbjct: 121 TVGHDINYLALSGALSMIGSKAQGPAIPLNLVSDLGGGALYLAFGMLAAVMHARETGEGQ 180
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +++G L + + + LW N +DGGA +Y Y+T DG++++VGA+E
Sbjct: 181 VVDAAILDGVGSLLTTFHGFRASGLWTDDYESNFIDGGAPWYACYKTLDGKYVSVGAVER 240
Query: 240 QFYAQLLAGLGMT----EEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
+FYAQLL G+G+ + ++ + + + F KT+ +W +F +AC PVL
Sbjct: 241 KFYAQLLDGMGLDASYLDRQMDKATWPEQKRVFAQIFARKTRDDWDAVFAGREACYAPVL 300
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHF 355
+ +A +HP R + + G+ APAPR S++ + P P + TR LR
Sbjct: 301 DMDEALTHPQVTERDGVV-HVEGIAQTAPAPRFSKSQPDTPRPPSAPDPDLATR--LRAQ 357
Query: 356 GYS 358
G++
Sbjct: 358 GWA 360
>gi|149376539|ref|ZP_01894300.1| probable fatty acid-CoA racemase [Marinobacter algicola DG893]
gi|149359206|gb|EDM47669.1| probable fatty acid-CoA racemase [Marinobacter algicola DG893]
Length = 383
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 147/374 (39%), Positives = 202/374 (54%), Gaps = 23/374 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
LKG VL+ LAP P+ M+L + GA VI + G D+ GK+ + ++LK +
Sbjct: 8 LKGTRVLDLTRLAPGPYGSMLLADMGAEVIVVGG-GRSGLPIDSYRRGKRFINLDLKSEE 66
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
GL + LA +DV++E FR GVM +L LG D L + NP+L+Y ++GYGQDGP + AG
Sbjct: 67 GLDAFRLLAANADVLMEGFRPGVMHRLGLGYDALRQDNPKLVYCSVTGYGQDGPLAQEAG 126
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+GLSG L +G + P P N+ ADF GGL A I+ AL ER +SG GQ +D
Sbjct: 127 HDINYVGLSGALGAMGPLDGPPALPLNIIADFAAGGLYAAYSILGALLERERSGLGQFLD 186
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKP----RGENLLDGGAHFYDTYETKDGRFMAVGALE 238
MV+G L T W KP RG+ LL G A FY Y DG+++AVGALE
Sbjct: 187 VAMVDGCLSL-----MTMHYPDWGKPVLPSRGKGLLTGEAPFYRCYVCNDGKYLAVGALE 241
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVTPV 294
F+ L GL + E+ +P H +TE+F+ +++ W + F+ DACV+PV
Sbjct: 242 GAFFTNLWRGLNL-EQPMPDHMRPDTWPAMTEQFERLFASRSRDAWVKHFEGRDACVSPV 300
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRH 354
L+ + HPH R P PA P SRTP +T+ + VLR
Sbjct: 301 LAPDEVFEHPHVQAR---FPGSDSYATPA-IPHYSRTPTMPGVTDGTD----DSYAVLRA 352
Query: 355 FGYSDANIEELIRE 368
G S+A I + + E
Sbjct: 353 LGLSEAKINKAVPE 366
>gi|410647752|ref|ZP_11358171.1| alpha-methylacyl-CoA racemase [Glaciecola agarilytica NO2]
gi|410863648|ref|YP_006978882.1| alpha-methylacyl-CoA racemase [Alteromonas macleodii AltDE1]
gi|410132659|dbj|GAC06570.1| alpha-methylacyl-CoA racemase [Glaciecola agarilytica NO2]
gi|410820910|gb|AFV87527.1| alpha-methylacyl-CoA racemase [Alteromonas macleodii AltDE1]
Length = 368
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 202/368 (54%), Gaps = 20/368 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-------QDTVGY--GKKS 53
L GI V+E AGL P P GMIL +FGA VI I++ A P +D + GKKS
Sbjct: 4 LNGIKVVELAGLGPCPAAGMILADFGAEVILIERKTANPNAGIDLDSNKDASFFKRGKKS 63
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+ ++LK + + L QSDV++E FR G+ EKL LGP+V + NP+L+Y R++G+GQ
Sbjct: 64 IALDLKNPDDVETVLKLVEQSDVLIEGFRPGITEKLGLGPEVCHQRNPKLVYGRMTGWGQ 123
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
GP + AGHDINY+ ++G L G + P P L D GGG L +GI AL
Sbjct: 124 TGPLAKNAGHDINYVSITGALHYGGLPDDAPYPTPTLVGDIGGGTLPLVIGITSALLYAQ 183
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
+G+GQVID + +G+ Y LT + L + +G++ G+H+ +TY+ DG++++
Sbjct: 184 NTGQGQVIDAAICDGTIYSMGLLTSIRAQGLLREEKGQDFFGAGSHWCNTYQCADGKYVS 243
Query: 234 VGALESQFYAQLLAGLGMT-EEELPQHEVE----TGRAKLTEKFKEKTQAEWCEIFDNTD 288
V ALE FY +L+ G +++ Q + RAK+ F KTQA+ +I + TD
Sbjct: 244 VQALEPNFYKELVTLCGFADDDDFAQQNNKKLWPQARAKMAAFFASKTQAQCNDILEGTD 303
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT-PGTSKITEHNPAPGVH 347
AC PVLS+ +A H H RG + + P PAP+ S + P +I P G H
Sbjct: 304 ACYAPVLSIPEAAEHEHIKARGCYT-GEGQYLQPTPAPKFSVSQPCIGEI----PNVGQH 358
Query: 348 TREVLRHF 355
T E+L
Sbjct: 359 TAEILNSL 366
>gi|294632959|ref|ZP_06711518.1| alpha-methylacyl-CoA racemase [Streptomyces sp. e14]
gi|292830740|gb|EFF89090.1| alpha-methylacyl-CoA racemase [Streptomyces sp. e14]
Length = 436
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 169/290 (58%), Gaps = 7/290 (2%)
Query: 44 QDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRL 103
D G ++ ++LK G+ + LA +DV +E +R GV E+L LGPD + + NP +
Sbjct: 5 HDLANRGVDTVAVDLKDPDGVESVLQLAEAADVFVEGYRPGVAERLGLGPDAVLERNPAV 64
Query: 104 IYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCAL 163
+YARL+GYGQ GP + AGHDINY+ SG L + + P PP NL D+ GGG M A
Sbjct: 65 VYARLTGYGQSGPLARTAGHDINYVAQSGALHAMARQGEAPRPPVNLLGDYAGGGTMAAY 124
Query: 164 GIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDT 223
GIV A+ E SG GQV+D M++G A L + L + L+ G N LD GA FYDT
Sbjct: 125 GIVCAVLEARASGHGQVVDAAMIDGVALLTAKLQGLRAAGLYADEPGTNYLDSGAPFYDT 184
Query: 224 YETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAE 279
Y DGR++AVGALE FY + ++ LG+ P + KL E +T+A+
Sbjct: 185 YRCADGRYLAVGALEPDFYREFVSRLGVDVTGWPAQDDRGAWPKLRELIASAIATRTRAQ 244
Query: 280 WCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAG-VVAPAPAPRL 328
W EI+ TDACVTPVLS +A PHN RG + R G V+ P+PAPRL
Sbjct: 245 WAEIYAGTDACVTPVLSFDEAAEDPHN--RGRRMFQRVGEVLHPSPAPRL 292
>gi|299132385|ref|ZP_07025580.1| L-carnitine dehydratase/bile acid-inducible protein F [Afipia sp.
1NLS2]
gi|298592522|gb|EFI52722.1| L-carnitine dehydratase/bile acid-inducible protein F [Afipia sp.
1NLS2]
Length = 383
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 206/339 (60%), Gaps = 11/339 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG------AQPFVQDTVGYGKKSLCI 56
L G+ +E + P P CGM+L + GA V+RI++ +P + + G+ ++ +
Sbjct: 8 LAGVRFIEMPAIGPGPMCGMLLADLGADVLRIERPERADIGIERPLETNFIMRGRTTIKL 67
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LKK +G++++ L ++D ++E FR GVME+L LGP+ +NP+L+Y R++G+GQ GP
Sbjct: 68 DLKKPEGVTLVLRLLREADGLIEGFRPGVMERLGLGPEPCLAANPQLVYGRITGWGQSGP 127
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+ AGHD+NY+ L+G L +G + P P NL DFGGG L ALG++ + E +SG
Sbjct: 128 LAKTAGHDLNYIALTGALHAMGRKGGAPPVPLNLIGDFGGGALFLALGLLAGILEARQSG 187
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+GQV+D +V+G A + + + + + RG N+LD GA+FYDTY+ DG ++AVG
Sbjct: 188 KGQVVDAAIVDGVAAMLTSINGLMACGVSSQERGTNILDSGAYFYDTYQCADGGYVAVGP 247
Query: 237 LESQFYAQLLAGLGMTEEELP----QHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
+E +F+A L LG++ E+ Q GR +L F + + EW +F TDACVT
Sbjct: 248 IEKRFHALFLEKLGLSVTEMSAQDDQARWSQGRERLRRIFLARPRDEWAALFAGTDACVT 307
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
PVLSL ++ PH RGS+I + AG APAPR SR+
Sbjct: 308 PVLSLQESFFDPHMTARGSYI-DVAGYRQAAPAPRFSRS 345
>gi|410473435|ref|YP_006896716.1| fatty-acyl-CoA racemase [Bordetella parapertussis Bpp5]
gi|408443545|emb|CCJ50211.1| putative fatty-acyl-CoA racemase [Bordetella parapertussis Bpp5]
Length = 388
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 215/384 (55%), Gaps = 17/384 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRID---KHGAQPFVQ---DTVGYGKKSLC 55
AL+G+ ++E GL PAPF M+L + GA V+R+ + G P + D + G++SL
Sbjct: 11 ALQGLRIIEMVGLGPAPFAAMMLADHGADVVRVHAAHRKGDFPLLDSRFDVLARGRRSLA 70
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L+ ++ L +D ++E FR GVME++ L P+ + PRL+Y R++G+GQ G
Sbjct: 71 LDLRAPGASGLLLELVGAADGLIEGFRPGVMERMGLAPEACLRRQPRLVYGRMTGWGQQG 130
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHD+NYLGL+G L +G +R P P N ADFGGGG++ A G++ AL
Sbjct: 131 PLARQAGHDLNYLGLTGALHAIGPSDRPPPVPLNYVADFGGGGMLLAFGMLTALLAVRGG 190
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GQV+D MV+G+ L S + W R NLLDGGA+FY TY DGRF+AV
Sbjct: 191 APGQVVDAAMVDGAGLLASMFWGFRAGGGWSDRREGNLLDGGAYFYATYACADGRFLAVA 250
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
+E +F+ L+ LG+ + + H+ + RA+L F + + W +F+++DAC
Sbjct: 251 CVERRFHDLLVERLGL-DPAVYTHDRDPAQWPVLRARLAALFATRPRDHWAALFEDSDAC 309
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
VTPVL +A HPH R +I + GV PAPRLS T ++ PA G H+ E
Sbjct: 310 VTPVLDWREAAHHPHAAARAGYI-DVEGVT--QPAPRLSAT--PARQPAAAPAVGAHSVE 364
Query: 351 VLRHFGYSDANIEELIREDVIEET 374
VL +G + + + +I +
Sbjct: 365 VLHEWGLAPERVASALDSGLIVQA 388
>gi|297617421|ref|YP_003702580.1| L-carnitine dehydratase/bile acid-inducible protein F
[Syntrophothermus lipocalidus DSM 12680]
gi|297145258|gb|ADI02015.1| L-carnitine dehydratase/bile acid-inducible protein F
[Syntrophothermus lipocalidus DSM 12680]
Length = 395
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 212/399 (53%), Gaps = 37/399 (9%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-------QPFVQD------TV 47
+ L GI VL+ + P PFC IL +FGA VI+++ G P + TV
Sbjct: 5 LPLAGIRVLDLSRYLPGPFCTQILADFGAEVIKVEDPGTGDLGRHLPPLIAGESARFYTV 64
Query: 48 GYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYAR 107
KKS+ ++L+K + + K L SDV+++ FR GVM++L LG + L K NP+LIY
Sbjct: 65 NRNKKSITLDLRKEEAKEIFKKLTAVSDVVVDQFRPGVMDRLGLGYEELKKINPKLIYCA 124
Query: 108 LSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVM 167
++GYG GP+ MAGHD+NYL L+G+ L G ++ P AD GG L +GI+M
Sbjct: 125 ITGYGLSGPWRDMAGHDLNYLNLAGVTLLNGTKDSLPALCGVQIADIAGGTLYAVIGILM 184
Query: 168 ALFERSKSGRGQVIDCNMVEGSAYL-----GSWLTRTQDTFLWDKPRGENLLDGGAHFYD 222
AL R K+G GQ+ D M++GS L G W + RG+ LL GG Y+
Sbjct: 185 ALIHRQKTGEGQLCDIAMLDGSVSLLAYTFGEWAGEGEVP-----RRGDGLLTGGYACYN 239
Query: 223 TYETKDGRFMAVGALESQFYAQLLAGLG----MTEEELPQHEVETGRAKLTEKFKEKTQA 278
YETKDG++++VGA+E +F+AQ +G + ++ P+ + E A L + KT+
Sbjct: 240 VYETKDGQYVSVGAIEEKFWAQFCQKVGRPQYIEQQYRPEMQSEM-IADLRNIMRTKTKQ 298
Query: 279 EWCEIFDNTDACVTPVLSLSQATSHPHNVHR------GSFIPNRAGVVAPAPAPRLSRTP 332
EW + F D C TPVL+L + + HP R +F + V+ P +LS TP
Sbjct: 299 EWVDFFAEDDICFTPVLNLEEVSEHPQVKAREMIIKLANFKESGKDVILPGIPIKLSTTP 358
Query: 333 GTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
G ++ PA G H EVL GYS I + RED +
Sbjct: 359 G--EVKPSFPALGEHNDEVLSSVGYSREQIRKF-REDKV 394
>gi|408415626|ref|YP_006626333.1| fatty-acyl-CoA racemase [Bordetella pertussis 18323]
gi|401777796|emb|CCJ63135.1| putative fatty-acyl-CoA racemase [Bordetella pertussis 18323]
Length = 382
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 216/384 (56%), Gaps = 16/384 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRID---KHGAQPFVQ---DTVGYGKKSLC 55
AL+G+ ++E GL PAPF M+L + GA V+R+ + G P + D + G++SL
Sbjct: 4 ALQGLRIIEMVGLGPAPFAAMMLADHGADVVRVHAAHRKGDFPLLDSRFDVLARGRRSLA 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L+ ++ L +D ++E FR GVME++ L P+ + PRL+Y R++G+GQ G
Sbjct: 64 LDLRAPGASDLLLELVGAADGLIEGFRPGVMERMGLAPEECLRRQPRLVYGRMTGWGQQG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHD+NYLGL+G L +G +R P+ P N ADF GGG++ A G++ AL
Sbjct: 124 PLARQAGHDLNYLGLTGALHAIGPADRPPSVPLNYVADF-GGGMLLAFGMLAALLAVRGG 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GQV+D MV+G+ L + + W R NLLDGGA+FY TY DGRF+AV
Sbjct: 183 APGQVVDAAMVDGAGLLAAMFWGFRAGGGWSDRREGNLLDGGAYFYATYACADGRFLAVA 242
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
+E +F+ L+ LG+ + + H+ + RA+L F + + W +F+++DAC
Sbjct: 243 CVERRFHDLLVERLGL-DPAVYTHDRDPAQWPALRARLAALFATRPRDHWAALFEDSDAC 301
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
VTPVL +A HPH R +I + GV PAPAPRLS T ++ PA G H E
Sbjct: 302 VTPVLDWREAAHHPHAAARAGYI-DVEGVTQPAPAPRLSAT--PARQPAAAPAVGAHLVE 358
Query: 351 VLRHFGYSDANIEELIREDVIEET 374
VL +G + + + +I +
Sbjct: 359 VLHEWGLAPERVAGALDSGLIVQA 382
>gi|154247502|ref|YP_001418460.1| L-carnitine dehydratase/bile acid-inducible protein F [Xanthobacter
autotrophicus Py2]
gi|154161587|gb|ABS68803.1| L-carnitine dehydratase/bile acid-inducible protein F [Xanthobacter
autotrophicus Py2]
Length = 389
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 198/362 (54%), Gaps = 18/362 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V++ + LAP P+C M+L + GA VI + A + + GK+ + +NLK +
Sbjct: 16 LAGVRVIDLSRLAPGPYCTMLLADLGAEVIVVGGGRAGVAIAE-FSRGKRHVALNLKAPE 74
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + + L +DV++E FR GV E++ G L NPRL++ L+G+GQDGP + AG
Sbjct: 75 GRAALHALVKAADVLVEGFRPGVAERIGAGYAELSALNPRLVFCALTGFGQDGPRAKEAG 134
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDI YL LSG+L LG + P P NL ADF GG L+ A+GI+ A+ E SGRGQ ID
Sbjct: 135 HDITYLALSGVLGGLGPKGAPPEAPLNLVADFAGGSLIAAIGILAAVIEARASGRGQFID 194
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
M++G+ L + T W + RG+ LL GGA FY TY DG FMAVGALE F+
Sbjct: 195 AAMMDGALSLMAMHLPLWKTPHWPE-RGDGLLGGGAPFYRTYACADGGFMAVGALERGFF 253
Query: 243 AQLLAGLGMTEEELPQH---EVETG-RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
L L + E P H ++ G +L E F + W +F TDACV PVL+
Sbjct: 254 ESLWRTLDLGEA--PDHMRRDLWPGIERQLAETFASAPRDHWTALFAGTDACVAPVLAPD 311
Query: 299 QATSHPHNVHRGSFI-PNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFGY 357
+ S PH R P+R V PRLSRTP ++ + + T EVLR G
Sbjct: 312 EVWSDPHVAARHPGCGPHRVPAV-----PRLSRTPAEARPLDLS----DRTAEVLREIGL 362
Query: 358 SD 359
SD
Sbjct: 363 SD 364
>gi|398867610|ref|ZP_10623063.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
gi|398236373|gb|EJN22159.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
Length = 371
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 201/371 (54%), Gaps = 22/371 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH------GAQPFVQDTVGYGKKSLCI 56
L GI ++E G+ P PFC M L + GA VI +++ G + + GK+S+
Sbjct: 2 LSGIRIVEICGIGPGPFCAMHLADLGADVIAVERAESVSITGQANAPINPLNRGKRSVVA 61
Query: 57 NLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGP 116
+LK +G + L +D ++E R GVME+L LGP NPRL+Y R++G+GQDGP
Sbjct: 62 DLKTPEGRETVLKLIESADAVIEGMRPGVMERLGLGPQECQARNPRLVYGRMTGWGQDGP 121
Query: 117 YSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSG 176
+S AGHD NY+ LSG L G P+ P L D GGG L A+G++ + ++G
Sbjct: 122 MASAAGHDNNYIALSGALYHSGTAGEAPSAPITLIGDIGGGALYLAVGLLAGILGARQTG 181
Query: 177 RGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGA 236
+G V+D +V+GSA++ S + L + RG+++ D G+HFY TY D +++A+G+
Sbjct: 182 KGTVVDAAIVDGSAHMMSLMLNLTRRGLLFEERGKSVHD-GSHFYATYRCADDQYVALGS 240
Query: 237 LESQFYAQLLAGLGMTEE-----ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+E QFYA L+ LG+ ++ + E R L + F + + WC++ + TD C
Sbjct: 241 MEPQFYALLMHKLGLQDDPRFAKQWDMKRWEELRGLLADIFASQPREHWCDLLEGTDVCF 300
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS---RTPGTSKITEHNPAPGVHT 348
PVLS A+ H H V RG + R G++ +PAPR TPG + P G HT
Sbjct: 301 APVLSPRDASQHRHMVERGVYF-ERDGLLQASPAPRFDGQRVTPGAT------PTRGEHT 353
Query: 349 REVLRHFGYSD 359
+V+ G D
Sbjct: 354 AQVMDALGTQD 364
>gi|33593112|ref|NP_880756.1| fatty-acyl-CoA racemase [Bordetella pertussis Tohama I]
gi|384204410|ref|YP_005590149.1| putative fatty-acyl-CoA racemase [Bordetella pertussis CS]
gi|33563487|emb|CAE42374.1| putative fatty-acyl-CoA racemase [Bordetella pertussis Tohama I]
gi|332382524|gb|AEE67371.1| putative fatty-acyl-CoA racemase [Bordetella pertussis CS]
Length = 382
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 216/384 (56%), Gaps = 16/384 (4%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRID---KHGAQPFVQ---DTVGYGKKSLC 55
AL+G+ ++E GL PAPF M+L + GA V+R+ + G P + D + G++SL
Sbjct: 4 ALQGLRIIEMVGLGPAPFAAMMLADHGADVVRVHAAHRKGDFPLLDSRFDVLARGRRSLA 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++L+ ++ L +D ++E FR GVME++ L P+ + PRL+Y R++G+GQ G
Sbjct: 64 LDLRAPGASDLLLELVGAADGLIEGFRPGVMERMGLAPEECLRRQPRLVYGRMTGWGQQG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P + AGHD+NYLGL+G L +G +R P+ P N ADF GGG++ A G++ AL
Sbjct: 124 PLARQAGHDLNYLGLTGALHAIGPADRPPSVPLNYVADF-GGGMLLAFGMLAALLAVRGG 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
GQV+D MV+G+ L + + W R NLLDGGA+FY TY DGRF+AV
Sbjct: 183 APGQVVDAAMVDGAGLLAAMFWGFRAGGGWSDRREGNLLDGGAYFYATYACVDGRFLAVA 242
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
+E +F+ L+ LG+ + + H+ + RA+L F + + W +F+++DAC
Sbjct: 243 CVERRFHDLLVERLGL-DPAVYTHDRDPAQWPALRARLAALFATRPRDHWAALFEDSDAC 301
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
VTPVL +A HPH R +I + GV PAPAPRLS T ++ PA G H E
Sbjct: 302 VTPVLDWREAAHHPHAAARAGYI-DVEGVTQPAPAPRLSAT--PARQPAAAPAVGAHLVE 358
Query: 351 VLRHFGYSDANIEELIREDVIEET 374
VL +G + + + +I +
Sbjct: 359 VLHEWGLAPERVAGALDSGLIVQA 382
>gi|111222882|ref|YP_713676.1| alpha-methylacyl-CoA racemase [Frankia alni ACN14a]
gi|111150414|emb|CAJ62112.1| Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase) [Frankia
alni ACN14a]
Length = 365
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 196/347 (56%), Gaps = 9/347 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF---VQDTVGYGKKSLCINLK 59
L G+ V+E AGL M L + GA V+R+ + G P+ D V G++ + ++L+
Sbjct: 8 LAGLRVVELAGLGQVAMAAMALADLGADVVRLIRPGGGPYPATAGDPVLRGRRHVTVDLR 67
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G +LA +DV+LE R GV E+L +GP NPRL+YAR++G+GQ GP S
Sbjct: 68 SPQGRDTALDLAAAADVVLEAMRPGVAERLGIGPQDCLARNPRLVYARITGWGQQGPLSH 127
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHDINY+ L+G+L LG P PP NL F GG + +G++ AL E +SGRGQ
Sbjct: 128 QAGHDINYIALTGVLGALGRAGERPLPPLNLLG-FAGGAMQGVIGVLAALHEVERSGRGQ 186
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+G + L + + W+ R NL DG A F+DTY DGRF+AV ALE
Sbjct: 187 VVDAAIVDGVSMLAQMVWSFRGQGRWNDARESNLFDGHAPFFDTYTCADGRFVAVAALEP 246
Query: 240 QFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
FYA LL GL + +LP + E G RA+ TE F +T+ EW F + DAC+TPVL
Sbjct: 247 AFYANLLLGLDLAGADLPAQDDEAGWPVLRARFTEAFARRTRDEWVAAFADLDACLTPVL 306
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
+ + T+HP RG+ + GV AP PR S TP +P
Sbjct: 307 TFDEVTAHPQIAARGTVV-EVDGVTQAAPTPRFSATPAPPPRPHTDP 352
>gi|296425203|ref|XP_002842132.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638391|emb|CAZ86323.1| unnamed protein product [Tuber melanosporum]
Length = 306
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 185/303 (61%), Gaps = 16/303 (5%)
Query: 1 MALKGITVLEFAGLAP--APFCGMILNEFGATVIRIDKHGAQPF-VQDTVGYGKKSLCIN 57
+ L G V+EFAGLAP A +GA V+RID H A P DT+ K+SL ++
Sbjct: 3 LPLSGPLVIEFAGLAPGVAHTPATSCKTYGARVLRIDPHNATPTPAVDTLTEHKRSLKLD 62
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK G +++ L ++ ++L+P+R GV+EKL L P + NP+L+YARL+G+ +DG Y
Sbjct: 63 LKSVSGHALLLRLLPKATILLDPYRPGVLEKLNLSPAAVHAVNPKLVYARLTGFRRDGKY 122
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ MAGHDIN+L +SG LSL G + P P N+ DF GGGL+C GI++AL + +
Sbjct: 123 ADMAGHDINFLAVSGALSLFGRKGEAPAAPGNILGDFAGGGLVCFCGILLALLDGKEE-- 180
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFL---WDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
+V++ NMV+G+A L S+ + W RG NLLDGGA FYDT+ TKDG++MAV
Sbjct: 181 -RVVEANMVDGTAGLTSFARFEMAKGVRGAWGNERGGNLLDGGAPFYDTFRTKDGKYMAV 239
Query: 235 GALESQFYAQLLAGLGMTEE---ELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNT 287
GALE +FY + G+ E ++P EV T L E +F EKT+ EW +FD T
Sbjct: 240 GALEQRFYEAFVEGMFRGTELHGKVPDREVPTNSPVLRELFGKRFLEKTREEWEGVFDGT 299
Query: 288 DAC 290
DAC
Sbjct: 300 DAC 302
>gi|149203054|ref|ZP_01880025.1| CAIB/BAIF family protein [Roseovarius sp. TM1035]
gi|149143600|gb|EDM31636.1| CAIB/BAIF family protein [Roseovarius sp. TM1035]
Length = 361
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 197/359 (54%), Gaps = 17/359 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+EF GL PAPF M+L E GA VI I + A V Q+ + GK+S+ ++LK
Sbjct: 2 LSGLRVVEFEGLGPAPFAAMMLAEMGAEVIVIHRPSAGNPVAGAQNLLDRGKRSIVLDLK 61
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+++ + L ++D ++E FR GVME+L LGP+ + +NPRL+Y R++G+GQDGP +
Sbjct: 62 TTADIAIARALIERADALIEGFRPGVMERLGLGPETMQAANPRLVYGRMTGWGQDGPRAY 121
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ SG L G P P L D GGG L G++ L +++G+G
Sbjct: 122 EAGHDLNYIATSGALWYAGAPGTPPQTPATLVGDVGGGALYLLAGMLAGLIRAARTGQGT 181
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+GSA++ + L T RG++LLD G H+ Y G ++ V LE
Sbjct: 182 VVDAAIVDGSAHMMALLMSMMPTGNLSMTRGQSLLD-GPHWSRVYACACGGWLTVQCLEP 240
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTEK-------FKEKTQAEWCEIFDNTDACVT 292
QFYA L+ LG++++ P + RA+ E+ F + A W E+F +DACV
Sbjct: 241 QFYAAFLSRLGLSDD--PHLAAQHDRAQWPEQGARLAALFAAQPLAHWAEVFAGSDACVA 298
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVL QA PH RG + + G ++P PAPR G P G H+ E+
Sbjct: 299 PVLRPDQAAQDPHMAARGVWQEDGGG-LSPTPAPRFD---GQRHSVAPPPTRGEHSAEI 353
>gi|343960615|dbj|BAK61897.1| C1q and tumor necrosis factor related protein 3 [Pan troglodytes]
Length = 210
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/164 (67%), Positives = 133/164 (81%)
Query: 85 VMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNP 144
VMEKLQLGP++L + NPRLIYARLSG+GQ G +S +AGHDINYL LSG+LS +G NP
Sbjct: 32 VMEKLQLGPEILQRENPRLIYARLSGFGQSGSFSWLAGHDINYLALSGVLSKIGRSGENP 91
Query: 145 TPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFL 204
P NL ADF GGG+MCALGI+MALF+R+++GRGQVID NMVEG+AYL S+L +TQ + L
Sbjct: 92 YAPLNLLADFAGGGVMCALGIIMALFDRTRTGRGQVIDANMVEGTAYLSSFLWKTQKSSL 151
Query: 205 WDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAG 248
W+ PRG+N+LDGGA FY TY T DG FMAVGA+E QFY L+ G
Sbjct: 152 WEAPRGQNMLDGGAPFYMTYRTADGEFMAVGAIEPQFYELLIKG 195
>gi|299530446|ref|ZP_07043867.1| hypothetical protein CTS44_06694 [Comamonas testosteroni S44]
gi|298721586|gb|EFI62522.1| hypothetical protein CTS44_06694 [Comamonas testosteroni S44]
Length = 322
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 182/319 (57%), Gaps = 13/319 (4%)
Query: 22 MILNEFGATVIRI------DKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSD 75
M+L GA VIR+ D A+ + +GK+ + +LK G ++ L SD
Sbjct: 1 MMLQGMGAKVIRVMRPTPADMGIARQQQFELQNHGKQLVHADLKTEAGRDIVLKLLASSD 60
Query: 76 VILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILS 135
++LE R GVME+L LGP + NP L+Y ++G+GQ GP + GHDINY+ SG+L
Sbjct: 61 ILLEGMRPGVMERLGLGPGICHAHNPSLVYGSMTGWGQSGPLAQTVGHDINYIATSGVLH 120
Query: 136 LLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGS-AYLGS 194
+G + PT P NL DFG GG++ G++ AL +G+G V+D MV+G+ A L
Sbjct: 121 AIGRADGVPTVPLNLIGDFGAGGMLLIAGVLAALTRARGTGQGCVVDAAMVDGALAMLAP 180
Query: 195 WLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEE 254
L R Q W R NL DGGAHFY TY T D + +AVGA+E +FYA LL GLG++E
Sbjct: 181 ILGRWQ-AGQWRDQRESNLFDGGAHFYTTYATADSKAVAVGAIEPRFYAALLRGLGLSEA 239
Query: 255 ELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG 310
LP ++ R +L F QA WC +F+ T+ACV+PVLSL++ HPH R
Sbjct: 240 GLPAQHDQSAWPAMRQRLAALFAMHDQAHWCRVFEGTEACVSPVLSLAELPEHPHFQARA 299
Query: 311 SFIPNRAGVVAPAPAPRLS 329
+F R GV+ PAPR S
Sbjct: 300 NF-GERDGVLHVRPAPRSS 317
>gi|345305776|ref|XP_001508799.2| PREDICTED: alpha-methylacyl-CoA racemase-like, partial
[Ornithorhynchus anatinus]
Length = 204
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 135/166 (81%)
Query: 83 KGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNR 142
KGVME+L LGP+V+ + NP+LIYARLSG+GQ G + AGHDIN+L LSG+LS +G +
Sbjct: 1 KGVMERLGLGPEVVQQENPKLIYARLSGFGQSGKLARTAGHDINFLALSGVLSKMGRSDE 60
Query: 143 NPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDT 202
NP P NL ADFGGGGLMCALGIVMAL+ER+KSG+GQVID NMVEG+AYL ++L TQ
Sbjct: 61 NPYAPLNLVADFGGGGLMCALGIVMALYERTKSGKGQVIDANMVEGTAYLSTFLWTTQSA 120
Query: 203 FLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAG 248
LWD+PRG+NLLD GA FY+TY+T DG+FMAVGA+E QFY L+ G
Sbjct: 121 GLWDQPRGKNLLDSGAPFYETYKTSDGKFMAVGAIEPQFYRLLIKG 166
>gi|85705910|ref|ZP_01037006.1| CAIB/BAIF family protein [Roseovarius sp. 217]
gi|85669498|gb|EAQ24363.1| CAIB/BAIF family protein [Roseovarius sp. 217]
Length = 361
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 197/359 (54%), Gaps = 17/359 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L G+ V+EF GL PAPF M+L E GA VI I + GA V ++ + GK+S+ ++LK
Sbjct: 2 LSGLRVVEFEGLGPAPFAAMMLAEMGADVIVIHRPGAGNPVAGARNLLDRGKRSIVLDLK 61
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
A ++ + L ++D ++E FR GVME+L LGP+V+ +NPRL+Y R++G+GQ GP +
Sbjct: 62 TATDVATARALITRADALIEGFRPGVMERLGLGPEVMQAANPRLVYGRMTGWGQTGPRAQ 121
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ SG L G P P L D GGG L G++ L ++G G
Sbjct: 122 EAGHDLNYIATSGALWYAGAPGTPPQTPPTLVGDVGGGALYLVAGLLAGLIHAGRTGLGT 181
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+GSA++ + L T RG++LLD G H+ Y G +++V LE
Sbjct: 182 VVDAAIVDGSAHMMALLMSMMPTGNLSMTRGQSLLD-GPHWSGVYACACGAWLSVQCLEP 240
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAK-------LTEKFKEKTQAEWCEIFDNTDACVT 292
QFYA LA LG+T + P+ + RA+ LT F K W E+F +DACV
Sbjct: 241 QFYAAFLARLGLTRD--PRFAAQQDRAQWPEQRAALTTLFASKPLVHWAEVFAGSDACVA 298
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS A PH RG + AG + PAPAPR G S P G H+ E+
Sbjct: 299 PVLSPDAAAHDPHMAARGIW-QEEAGSLCPAPAPRFD---GASPSIAPPPTRGEHSAEI 353
>gi|397732111|ref|ZP_10498852.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
gi|396932036|gb|EJI99204.1| coA-transferase family III family protein [Rhodococcus sp. JVH1]
Length = 373
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 199/373 (53%), Gaps = 20/373 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQ--------DTVGYGK 51
L G+ L AG+ P P+ M+L + GA V+R+ + A+ Q D V G
Sbjct: 5 LAGVRALVLAGMGPVPYVSMLLADMGADVVRVVRPPNRSARALSQTDGLTEEVDVVNRGV 64
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
++ ++LK G + LA +DV +E +R GV E+L LGPD + N RL+Y RL+GY
Sbjct: 65 DAVAVDLKDPDGRESVLRLAEAADVFIEGYRPGVTERLGLGPDEVMARNERLVYVRLTGY 124
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQ GP S AGHDINY+ SG L + + P PP NL D+ GG M A GI AL
Sbjct: 125 GQTGPRSRDAGHDINYVAQSGALHAMARSDSAPRPPINLLGDYAAGGAMGAYGIACALVS 184
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
+++GRGQVID MV+G A L + L + L+ G N LD GA FYDTY +G +
Sbjct: 185 AARTGRGQVIDAAMVDGVAALTAKLQGLRAAGLYSDDPGTNFLDSGAPFYDTYRCAEGGY 244
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNT 287
+AVGALE FY + + LG+ + P R + + + +T+ EW ++F T
Sbjct: 245 IAVGALEPDFYREFTSRLGVDTADWPDQNDRAAWPHLRKLIGDAVECRTRDEWEKVFAGT 304
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG-V 346
DACVTPVL+ +A PHN RG + GV+ P PAPR S TP T P G V
Sbjct: 305 DACVTPVLTFDEAAVDPHNTQRGVYR-TVGGVLHPMPAPRFSGTPAREPET---PRVGTV 360
Query: 347 HTREVLRHFGYSD 359
T +V +G D
Sbjct: 361 ATADVASRWGLGD 373
>gi|398866542|ref|ZP_10622030.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
gi|398240247|gb|EJN25933.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
Length = 365
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 201/362 (55%), Gaps = 22/362 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVI---RIDKHGAQPFVQDTVGYGKKSLCINLK 59
L GI V+E G+ P PFC M L + GA VI R+D+ G + + V GK+S+ +LK
Sbjct: 2 LSGIKVVEICGIGPGPFCAMHLADLGADVIAVERVDQGGGR---TNLVNRGKRSVAADLK 58
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G ++ L +DV++E R GVME+L LGPDV NPRL++ R++G+GQ GP +
Sbjct: 59 TVEGRELVLKLIEDADVLIEGMRPGVMERLGLGPDVCRARNPRLVFGRMTGWGQGGPMAQ 118
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD NY+ LSG L G P+ L D GGG L A+G++ + ++G+G
Sbjct: 119 AAGHDNNYISLSGALYHNGTAAEPPSTAITLLGDIGGGALYLAVGLLAGVLNARQTGQGT 178
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDK--PRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
V+D +++GSA++ + T++ + + RG NL D +HFY TY D F+ +G++
Sbjct: 179 VVDAAILDGSAHMMQLMLSTRNAGFFGEGFNRGNNLHD-SSHFYSTYRCADDEFITLGSI 237
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVT 292
E QFYA LL LG+ ++ + + R TE F+ +T+ +WCE+ + TD C +
Sbjct: 238 EPQFYALLLQKLGLQDDPRFARQWDGKRWGEMHQHFTELFQTRTRDQWCELLEYTDVCFS 297
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHTRE 350
PVLS +A HPHNV R + R ++ APR ++ P P G HT +
Sbjct: 298 PVLSPDEAAKHPHNVARQVYFV-RDNMLQTVAAPRFD-----DQVVVPGPIPRFGEHTDQ 351
Query: 351 VL 352
V+
Sbjct: 352 VV 353
>gi|32564160|ref|NP_496163.2| Protein ZK892.4 [Caenorhabditis elegans]
gi|29840845|sp|Q09618.3|YS74_CAEEL RecName: Full=CaiB/baiF CoA-transferase family protein ZK892.4
gi|25815086|emb|CAA88571.2| Protein ZK892.4 [Caenorhabditis elegans]
Length = 340
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 191/332 (57%), Gaps = 15/332 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E AGLAP P CGM+L +FGA V IDK P ++ + GK ++LK +
Sbjct: 5 LSGIKVVEIAGLAPVPHCGMMLADFGADVTVIDKK--NPAIEQRLNRGKTMKQLDLKNPE 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ +++L SDV+L+P+R G +EK+ L P L +N LI ++SGYGQ G S G
Sbjct: 63 DIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETG 122
Query: 123 HDINYLGLSGIL-SLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS-GRGQV 180
HDINY+ LSG+L + G P PP N+ ADF GGGL A GI+ A++ RS + G+G +
Sbjct: 123 HDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCL 182
Query: 181 IDCNMVEGSAYLGSWLTRTQD--TFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
+DC+M EG AYL S++ D DK L G Y TY+TKD +F+AVGA+E
Sbjct: 183 LDCSMTEGVAYLSSFVQHYYDQPNLFTDK---YALFSGECPIYRTYKTKDDKFVAVGAVE 239
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGR--AKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
+FY L L + +L V G+ L +F +KT+ +W IF + CVTPVL
Sbjct: 240 PKFYQNLFKLLNVDGRDL---FVNPGKITEDLESRFLQKTRDKWANIFKGQECCVTPVLD 296
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
+ + S+ +V R SF + +A P+PR+
Sbjct: 297 IHEVGSYGQHVDRNSFTKTSSNWIA-NPSPRV 327
>gi|149912744|ref|ZP_01901278.1| probable fatty acid Co-A racemase [Roseobacter sp. AzwK-3b]
gi|149813150|gb|EDM72976.1| probable fatty acid Co-A racemase [Roseobacter sp. AzwK-3b]
Length = 363
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 196/357 (54%), Gaps = 13/357 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-QPFVQDT--VGYGKKSLCINLK 59
L+GI V+E GL P PF M+L + GA VI I + GA P D + GKKS+ ++LK
Sbjct: 2 LQGIRVIEIEGLGPGPFAAMMLADLGAEVIVIHRPGAGNPVAGDVNLLDRGKKSITLDLK 61
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
L++ + L +D ++E FR GVME+L LGPD NPRL+Y R++G+GQ GP S
Sbjct: 62 DPADLAIARALIATADALIEGFRPGVMERLGLGPDTCRADNPRLVYGRMTGWGQYGPKSQ 121
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
MAGHD+NY+ SG L + P P L D GGG L GI+ L ++SG+G
Sbjct: 122 MAGHDLNYIATSGALWYASAPDAPPLTPPTLVGDVGGGALYLVAGILAGLLNAARSGQGT 181
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+GSA++ + L + RG++LLD G H+ TY G +AV LE
Sbjct: 182 VVDAAIVDGSAHMMALLMSMAPSGNLSDRRGQSLLD-GPHWCRTYACACGGHIAVQCLEP 240
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPV 294
+FYA L +G++++ +++ + A+L F K + W +F+ +DAC PV
Sbjct: 241 KFYAAFLDLMGLSDDPAFAEQMDAAQWPDQTARLAALFAAKPRDHWAALFEGSDACAAPV 300
Query: 295 LSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
LS ++A PH RG++ + G+ PA APR G S + PA G H E+
Sbjct: 301 LSPTEAACDPHMAARGAWT-DAQGLRQPATAPRFD---GASAVPGPVPARGAHGSEL 353
>gi|341885575|gb|EGT41510.1| hypothetical protein CAEBREN_08694 [Caenorhabditis brenneri]
Length = 343
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 194/335 (57%), Gaps = 11/335 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E GLAP P CGM+L +FGA V IDK P V+ + GK +L+ +
Sbjct: 5 LSGIKVIELGGLAPVPHCGMLLADFGADVTVIDK--KNPTVEQRMNRGKTMKEFDLRTPE 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ +++L SDV+L+P+R G +EK+ L P L N LI R+SGYGQ G + AG
Sbjct: 63 DIKKVRDLCKISDVLLDPYRPGTLEKMGLDPLSLWNDNKGLIICRISGYGQTGRMRNEAG 122
Query: 123 HDINYLGLSGIL-SLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS-GRGQV 180
HDINY+ LSG+L + G P PP N+ ADF GGGL A GIV A+ R+ + G+G V
Sbjct: 123 HDINYVALSGMLPTFAGAEASRPWPPVNMLADFAGGGLSAAFGIVSAIHARTHNGGKGCV 182
Query: 181 IDCNMVEGSAYLGSWLTRTQD-TFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
+DC+M EG AYL S++ D T L+ G Y TY+TKD +FMAVG LE
Sbjct: 183 LDCSMTEGVAYLASFVQHYYDQTHLFTDKYAA--FTGECPIYRTYKTKDEKFMAVGPLEP 240
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
+F+ + LG+ ++ + +T + +L KF EKT+ EW +IF+ D CVTPVL + +
Sbjct: 241 KFHQNMFEVLGIDGNDMFSNPEKTIK-ELENKFSEKTRDEWAKIFEGKDCCVTPVLDIHE 299
Query: 300 ATSHPHNVHRGSFIPNR--AGVVAPAPAPRLSRTP 332
++ +V R +F + G P+PR+ +TP
Sbjct: 300 VGTYGQHVDRQNFTKSDKFGGTWIAKPSPRV-QTP 333
>gi|407795856|ref|ZP_11142813.1| hypothetical protein MJ3_03112 [Salimicrobium sp. MJ3]
gi|407019676|gb|EKE32391.1| hypothetical protein MJ3_03112 [Salimicrobium sp. MJ3]
Length = 406
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 212/382 (55%), Gaps = 33/382 (8%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------HGAQPFV-QDTVGY--- 49
+ L+ + VL+ L P P+C ++L +FGA VI+++ G +P + QD+ +
Sbjct: 29 LPLESMRVLDLTRLLPGPYCTLMLADFGAEVIKVEDPYNGDYARGYEPNLDQDSAFFHSL 88
Query: 50 --GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYAR 107
KKS+C++LK +G L ++DV++E +R GVME+L L + L K N RLIY
Sbjct: 89 NRNKKSICLDLKTEEGKEYFLELVKRADVVVESYRPGVMERLGLDYEQLKKVNDRLIYCA 148
Query: 108 LSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVM 167
++GYGQ GPY + GHD+NY+ +G+L+L G + P P AD GGG L A+GI++
Sbjct: 149 ITGYGQTGPYRNQPGHDVNYISYAGLLNLTGEKEGKPIIPSAQIADIGGGALPAAVGILL 208
Query: 168 ALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDK---PRGENLLDGGAHFYDTY 224
AL ER KSG GQ +D +M++G SW+ F ++ RGE +L+GG Y+ Y
Sbjct: 209 ALLEREKSGTGQFVDISMLDGVV---SWMQLLLPAFFKEEEEPKRGEQMLNGGLACYEVY 265
Query: 225 ETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQH-----EV-ETGRAKLTEKFKEKTQA 278
+ KDG++++VGALE +F+ +G E+L H EV E +++++ KT +
Sbjct: 266 QAKDGKWLSVGALEPKFWKNFCEAIG--REDLISHINSPPEVQEKMKSQISGIVLTKTSS 323
Query: 279 EWCEIFDNTDACVTPVLSLSQATSHPHNVHRG---SFIPNRAGVVAPAPAP-RLSRTPGT 334
EW E+F +ACVTP+L+ + P R +F + G + P +LS TPG
Sbjct: 324 EWMEVFREVEACVTPLLTFEEMIKDPQITAREMIRTFEHDTLGSIRQIGIPVKLSGTPGI 383
Query: 335 SKITEHNPAPGVHTREVLRHFG 356
I P G HT E+L+ G
Sbjct: 384 --IHSRAPKLGEHTDEILKKIG 403
>gi|374995509|ref|YP_004971008.1| acyl-CoA transferase/carnitine dehydratase [Desulfosporosinus
orientis DSM 765]
gi|357213875|gb|AET68493.1| putative acyl-CoA transferase/carnitine dehydratase
[Desulfosporosinus orientis DSM 765]
Length = 392
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 205/394 (52%), Gaps = 34/394 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L G+ VL+ L P PFC +L +FGA +I+I+ + + V
Sbjct: 8 LTGVKVLDLTRLLPGPFCSQVLADFGAEIIKIEDTKLGDYTRWYPPVLGESSARFYAVNR 67
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
KKS+ +NLK+ G + + L NQSDV+LE FR GVMEKL LG D L + NPRLIY ++
Sbjct: 68 NKKSVKLNLKEEPGKEIFRQLINQSDVLLEGFRPGVMEKLGLGYDELKRINPRLIYCAIT 127
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHD+NYL L+GI +G ++ P AD GG L + I++AL
Sbjct: 128 GYGQSGPYRDAAGHDLNYLNLAGISDRIGHKDERPPLAGIPIADI-GGSLWSIVAILLAL 186
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWD---KPRGENLLDGGAHFYDTYET 226
R +G+GQ D M++G+ SWL F RG + L+GG FY+ Y T
Sbjct: 187 RAREITGKGQYCDVAMLDGAL---SWLAMPLADFSVTGKLPARGSDHLNGGYAFYNIYPT 243
Query: 227 KDGRFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKEKTQAEW 280
DG+++++GA+E +F+ + + E + Q E+ T LT F +K+QAEW
Sbjct: 244 ADGKYVSLGAVEKKFWTEFCTKIAKPEYIPLQFDPCRQGEIIT---NLTSMFVQKSQAEW 300
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIP---NRAGVVAPAPAPRLSRTPGTSKI 337
F +D C TPV ++ SHP R + N V+ P +LS TPG K+
Sbjct: 301 VNFFAASDICFTPVQDMNDLLSHPQIQARNMLVEVEINEKTVLLPGIPVKLSDTPGKVKL 360
Query: 338 TEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
P G HT +L+ GY+ I +L ++ VI
Sbjct: 361 --EFPGYGQHTLLILKSLGYTKEQIADLQQQGVI 392
>gi|424860656|ref|ZP_18284602.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
gi|356659128|gb|EHI39492.1| alpha-methylacyl-CoA racemase [Rhodococcus opacus PD630]
Length = 373
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 198/373 (53%), Gaps = 20/373 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK---HGAQPFVQ--------DTVGYGK 51
L G+ L AG+ P P+ M+L + GA V+R+ + A+ Q D V
Sbjct: 5 LAGVRALVLAGMGPVPYVSMLLADMGADVVRVVRPPNRSARALSQTDGLTEEVDVVNRAV 64
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
++ ++LK G + LA +DV +E +R GV E+L LGPD + N RL+Y RL+GY
Sbjct: 65 DAVAVDLKDPDGRESVLRLAEAADVFIEGYRPGVTERLGLGPDEVMARNERLVYVRLTGY 124
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQ GP S AGHDINY+ SG L + + P PP NL D+ GG M A GI AL
Sbjct: 125 GQTGPRSRDAGHDINYVAQSGALHAMARSDSAPRPPINLLGDYAAGGAMGAYGIACALVS 184
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
+++GRGQVID MV+G A L + L + L+ G N LD GA FYDTY +G +
Sbjct: 185 AARTGRGQVIDAAMVDGVAALTAKLQGLRAAGLYSDDPGTNFLDSGAPFYDTYRCAEGGY 244
Query: 232 MAVGALESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNT 287
+AVGALE FY + + LG+ + P R + + + +T+ EW ++F T
Sbjct: 245 IAVGALEPDFYREFTSRLGVDTADWPDQNDRAAWPHLRKLIGDAVECRTRDEWEKVFAGT 304
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPG-V 346
DACVTPVL+ +A PHN RG + GV+ P PAPR S TP T P G V
Sbjct: 305 DACVTPVLTFDEAAVDPHNTQRGVYR-TVGGVLHPMPAPRFSGTPAREPET---PRVGTV 360
Query: 347 HTREVLRHFGYSD 359
T +V +G D
Sbjct: 361 ATADVASRWGLGD 373
>gi|268580655|ref|XP_002645310.1| Hypothetical protein CBG00232 [Caenorhabditis briggsae]
Length = 342
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 189/331 (57%), Gaps = 10/331 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E AGLAP P CGM+L +FGA V IDK P V+ + GK +L+K +
Sbjct: 5 LNGIKVVELAGLAPVPHCGMMLADFGADVTVIDK--KHPVVEQRMNRGKTMKEFDLRKPE 62
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ ++ L SDV+L+P+R G +EK+ L P L N LI R+SGYGQ G AG
Sbjct: 63 DVKKVRELCKTSDVLLDPYRPGTLEKMGLDPLSLWNDNKGLIICRISGYGQTGRMKDEAG 122
Query: 123 HDINYLGLSGIL-SLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS-GRGQV 180
HDINY+ +SG++ + G P PP N+ ADF GGGL A GIV A+ R + G+G V
Sbjct: 123 HDINYVAMSGMMPTFAGTEASRPWPPVNMLADFAGGGLSAAFGIVSAIHARHHNGGKGCV 182
Query: 181 IDCNMVEGSAYLGSWLTRTQD-TFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
+DC+M EG+AYL S++ D T L+ G Y TY+TKDG+FMAVG LE
Sbjct: 183 LDCSMTEGTAYLASFVQHYYDQTHLFTDKYAA--FTGECPIYRTYKTKDGKFMAVGPLEP 240
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQ 299
+F+ + LG+ ++L + +L F +KT+ EW +IF+ D CVTPVL + +
Sbjct: 241 KFHQNMFEVLGIDGDDLFSDPDRITK-ELEATFLQKTRDEWSKIFEGKDCCVTPVLDIHE 299
Query: 300 ATSHPHNVHRGSFIPNR--AGVVAPAPAPRL 328
++ +V R +F + G P+PR+
Sbjct: 300 VGTYGQHVDRQNFSKSDKFGGTWIAKPSPRV 330
>gi|119503780|ref|ZP_01625862.1| putative racemase [marine gamma proteobacterium HTCC2080]
gi|119460288|gb|EAW41381.1| putative racemase [marine gamma proteobacterium HTCC2080]
Length = 378
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHG---AQPFVQ----DTVGYGKKSLC 55
LK I V+E AGL P CGM+L + GA V+ IDK G + + D + K+ +C
Sbjct: 4 LKDIRVIEMAGLGAGPLCGMMLADMGAEVLLIDKPGRPSPEALIHVDKIDPLNRSKRRVC 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
+NLK A ++++K + SDV++E +R GVME+L LGPD SNPRL+YARL+G+GQ G
Sbjct: 64 LNLKTASHVTLLKEIIGLSDVLIESYRPGVMERLGLGPDACLNSNPRLVYARLTGWGQTG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
P S AGHD NY+ +G L G P P L D L+ A GI AL +K+
Sbjct: 124 PMSDKAGHDPNYVAATGALYHAGSSGAPPVTPPTLLGDASAAVLLVA-GISAALVSAAKT 182
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQV+D + E + YL ++ RG LDG A + TY T DG +M V
Sbjct: 183 GHGQVLDAAIAECTNYLTTYAKSFYQAGQLTDERGGAWLDGAAPWNATYVTSDGGYMVVA 242
Query: 236 ALESQFYAQLLAGLGMTEEEL----PQHEVETG---RAKLTEKFKEKTQAEWCEIFDNTD 288
A+ES+FY LL L + E+ L Q + E RA + +F ++A W E F N D
Sbjct: 243 AIESKFYEALLTALDLDEDPLFANGGQWDKEAWPQQRAMVAARFAANSRAYWSERFLNID 302
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTP 332
ACV+P L+ ++ H HR + G V PAPAPR S TP
Sbjct: 303 ACVSPALTYGESHHHTQFAHREAHWVEE-GQVFPAPAPRFSLTP 345
>gi|328542692|ref|YP_004302801.1| alpha-methylacyl-CoA racemase [Polymorphum gilvum SL003B-26A1]
gi|326412438|gb|ADZ69501.1| Alpha-methylacyl-CoA racemase (2-methylacyl-CoAracemase)
[Polymorphum gilvum SL003B-26A1]
Length = 394
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 213/392 (54%), Gaps = 32/392 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY-----------GK 51
L GI+V+EF G+ PAPF M+L + GA V+RID+ G P + + G+
Sbjct: 11 LSGISVVEFTGIGPAPFAAMLLADLGARVLRIDRPGGYPPPDPGLDFNEMGRHAIFNRGR 70
Query: 52 KSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGY 111
++ ++LK ++ L +D ++E +R G ME+L LGP +NPRL+YAR++G+
Sbjct: 71 HAVRLDLKAPASRDLVLRLVGAADALIEGYRPGTMERLGLGPQPCLAANPRLVYARMTGW 130
Query: 112 GQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFE 171
GQ GP + AGHD+NY+GLSG LSL G P L D GGGGLM A G++ + E
Sbjct: 131 GQTGPLALTAGHDLNYVGLSGALSLFGQDGTVPRAIPPLVGDMGGGGLMMAFGLLAGILE 190
Query: 172 RSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRF 231
+SG GQV+D +V+G+A L + + W P G LDGG H+Y Y DGRF
Sbjct: 191 ARQSGLGQVLDAAIVDGAAALCALPKALRLAGAWAGPAGTGTLDGGRHYYRQYRCADGRF 250
Query: 232 MAVGALESQFYAQLLAG----------LGMTEEELPQHEVETGRAKLTEKFKEKTQAEWC 281
+AVGA+E F LL G LG ++E H +L E F + + W
Sbjct: 251 VAVGAIEPAFRTALLDGLGLLDDPRFLLGREDDE--AHCTR----RLEEIFASRDRDHWA 304
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
++F TDACVTPVL L +A HP RG+ + V AP PR SRTPG ++
Sbjct: 305 DLFAATDACVTPVLGLEEADGHPQAAARGAIV-TIDDVAQHAPVPRFSRTPGAVAVS--- 360
Query: 342 PAPGV-HTREVLRHFGYSDANIEELIREDVIE 372
PA G +T LR +G S+ IE LI + ++E
Sbjct: 361 PAQGTRNTPGALRDWGLSEDEIEALIADGIVE 392
>gi|425735019|ref|ZP_18853335.1| L-carnitine dehydratase/bile acid-inducible protein F
[Brevibacterium casei S18]
gi|425480463|gb|EKU47629.1| L-carnitine dehydratase/bile acid-inducible protein F
[Brevibacterium casei S18]
Length = 393
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/362 (38%), Positives = 205/362 (56%), Gaps = 14/362 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTV-GYGKKSLCINLKKA 61
L G+ VL+ G+ P PF M+L + GA VIR+D A + V GKKS+ +LK +
Sbjct: 29 LDGVRVLDLGGIGPGPFATMMLADLGAEVIRLDPPQATGEAMNPVLDRGKKSVIADLKTS 88
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G+++ + +A +SD+++E FR G E+L LGP L NP L+Y R++GYGQDGP + A
Sbjct: 89 EGIALARAIAGRSDIVIEGFRPGAAERLGLGPGDLQALNPALVYGRITGYGQDGPKAQKA 148
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+ Y+ +G+L+ LG + P P NL DFGGGG++ +G++ L SG G V+
Sbjct: 149 GHDLGYIASTGLLAQLGRADGPPQFPANLLGDFGGGGMLLVVGVLSGLTRARASGEGTVV 208
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLW-DKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
D M++G+ L + + LW RG NLLD GA FYD Y T DGR ++V +E
Sbjct: 209 DAAMIDGANLLYAMMHGFAAMGLWRHDARGHNLLDSGAPFYDVYPTADGRHLSVACIERP 268
Query: 241 FYAQLLAGLGMTEEELPQ----------HEVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
F+ + + LG+ E+ELP+ RA + ++ E +F + DAC
Sbjct: 269 FFNEFVRALGL-EDELPEPLESLDHWQPQHWPALRAIIAPAIAARSLTELETLFADRDAC 327
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
V PVL++++A + HNV RG F P+ GV PAPAPR + GT + P G T E
Sbjct: 328 VEPVLTMAEAKADAHNVARGLFAPDADGVDQPAPAPRFAGA-GTGRSPRRAPRIGDDTAE 386
Query: 351 VL 352
V+
Sbjct: 387 VI 388
>gi|407803991|ref|ZP_11150821.1| CoA-transferase [Alcanivorax sp. W11-5]
gi|407022084|gb|EKE33841.1| CoA-transferase [Alcanivorax sp. W11-5]
Length = 387
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/376 (36%), Positives = 198/376 (52%), Gaps = 15/376 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA----QPFVQDTVGYGKKSLCINL 58
L+G+ VL+ L P P C + L + GA VI+I+ GA P ++ + K+ + I+L
Sbjct: 7 LRGVRVLDLTRLLPGPVCSLHLADLGADVIKIEDTGAGDYVPPILRAIINRNKRGIRIDL 66
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K+ GL V L +D+++E FR GV ++L + DVL K NP+L+Y +SGYGQ GPY
Sbjct: 67 KQQSGLEVFLRLVRSADIVIEGFRPGVADRLGISYDVLSKLNPKLVYCSISGYGQTGPYR 126
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
GHD+NY G +G+ +G+ ++P AD GG L +GI ALF+ +SGRG
Sbjct: 127 DAPGHDLNYCGFTGVADQIGFDAQSPALSNVPLADLMGGTLTALMGIQAALFDAQRSGRG 186
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
+ +D ++ +G T T P G + L GG Y Y T+DGRFMAVGALE
Sbjct: 187 RYVDMSISDGVLAHAVMPLATLGTHGHTYPAGGDTLSGGLPCYGLYRTRDGRFMAVGALE 246
Query: 239 SQFYAQL--LAGLGMTEEELPQHEVETGR---AKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+F+ + L +++ H+ R A+LT F + Q W E F + D CVTP
Sbjct: 247 RKFWDRFCDLIERPDLKDKHRSHDKAVNRAVHAELTGLFASQEQEYWAERFKDNDCCVTP 306
Query: 294 VLSLSQATSHPHNVHRGSFI----PNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
VL L +A H R + P V A R+S+ + H P PG HTR
Sbjct: 307 VLKLEEALQHEQFRARDMVLETEHPTYGPVTQAACPVRMSQF--RFSLRRHAPLPGEHTR 364
Query: 350 EVLRHFGYSDANIEEL 365
EVL+ G SDA+I++L
Sbjct: 365 EVLKEAGLSDADIDDL 380
>gi|407802388|ref|ZP_11149229.1| alpha-methylacyl-CoA racemase [Alcanivorax sp. W11-5]
gi|407023543|gb|EKE35289.1| alpha-methylacyl-CoA racemase [Alcanivorax sp. W11-5]
Length = 392
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 199/393 (50%), Gaps = 38/393 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVGY 49
L + VL+F+ L P PF +IL + GA V+R++ G V +
Sbjct: 5 LSTLKVLDFSTLLPGPFGTLILADLGAQVLRVESPTRPDMVRMLPPMAGGISAVHGYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LKK + ++V+ L D+I+E FR GVM +L +G + L + NP LIY ++
Sbjct: 65 SKRSLALDLKKPEAVAVIHRLVQDYDIIVEQFRPGVMNRLGVGYEALREINPGLIYCSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQDGPY AGHD+NYL ++G+ + G R+ P P AAD GG + I+ A+
Sbjct: 125 GYGQDGPYRDRAGHDLNYLAIAGMTAYNGRRDSGPAPMALQAADIAGGSCHAVMAILAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R +G GQ ID +M + + L + LT Q + P E G FYD YET+DG
Sbjct: 185 IHRQATGEGQHIDISMTDAAFSLHA-LTAPQALIAGEDPVLERTQLNGGSFYDCYETRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTE-----EELPQHEVETGRAKLTEKFKEKTQAEWCEIF 284
R+ +V LE QF+ Q +G + V +A++ KEK+ EW IF
Sbjct: 244 RWFSVAGLEPQFFLQFCQAIGRPHLATKGLAMAPDIVAEVKAEIRAAMKEKSFDEWSAIF 303
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAG------VVAP----APAPRLSRTPGT 334
DACV PVLSLS+A HP RG + AG V +P A AP G
Sbjct: 304 AGVDACVEPVLSLSEAAEHPQLKARGMVVEVPAGEGTQRQVASPFKFSATAPEYRFAGGM 363
Query: 335 SKITEHNPAPGVHTREVLRHFGYSDANIEELIR 367
PG HTREVL G+SD +I+ L++
Sbjct: 364 ---------PGAHTREVLAEHGFSDDDIQALMQ 387
>gi|374367472|ref|ZP_09625535.1| alpha-methylacyl-CoA racemase [Cupriavidus basilensis OR16]
gi|373100998|gb|EHP42056.1| alpha-methylacyl-CoA racemase [Cupriavidus basilensis OR16]
Length = 346
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 183/321 (57%), Gaps = 11/321 (3%)
Query: 22 MILNEFGATVIRIDKHGAQPFVQDTV-GYGKKSLCINLKKAKGLSVMKNLANQSDVILEP 80
M L + GA VI +++ A + ++ GK+S+ NLK +G + L +D ++E
Sbjct: 1 MHLADLGADVIAVEREEAAGWAGPSLLNRGKRSVVANLKTPEGRETVLRLIEGADALIEG 60
Query: 81 FRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWR 140
R GVME+L LGPDV NP+L+Y R++G+GQDGP + AGHD NY+ LSG L G
Sbjct: 61 MRPGVMERLGLGPDVCLARNPKLVYGRMTGWGQDGPMAQAAGHDNNYISLSGALYYNGTP 120
Query: 141 NRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQ 200
P+ + D GGG L A+G++ + + ++G+G V+D +V+GSA++ L T+
Sbjct: 121 KEPPSSAITVIGDVGGGALYLAVGLLSGILKARETGKGSVVDAAIVDGSAHMLQLLLATR 180
Query: 201 DTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHE 260
L RGEN+ D +HFY TY DG F+ +G+LE QFYA LL LG+ ++ +
Sbjct: 181 TKGLVTGARGENVHD-SSHFYGTYRCADGGFVTLGSLEPQFYALLLERLGLKDDARFTQQ 239
Query: 261 VETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPN 315
+ R TE F KT+ EWC +NTD C PVLS +A HPHNV RG +
Sbjct: 240 WDRKRWPELHRHFTEVFGSKTRDEWCAQMENTDVCFGPVLSPQEAAQHPHNVARGIYF-E 298
Query: 316 RAGVVAPAPAPRLS---RTPG 333
R G++ +PAPR RTPG
Sbjct: 299 REGLLQSSPAPRFDGQVRTPG 319
>gi|433774208|ref|YP_007304675.1| putative acyl-CoA transferase/carnitine dehydratase [Mesorhizobium
australicum WSM2073]
gi|433666223|gb|AGB45299.1| putative acyl-CoA transferase/carnitine dehydratase [Mesorhizobium
australicum WSM2073]
Length = 357
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 195/351 (55%), Gaps = 16/351 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L+GI ++E L PAPF GM+ + GA VI + + + + GK+S+ ++LK
Sbjct: 2 LRGIRIVEIEALGPAPFAGMLFADLGADVIVVHRREPGAPQRSLLDRGKRSIALDLKNMD 61
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
++++ L +D ++E FR GVME+L LGP+V +NPRL+Y R++G+GQDGP + AG
Sbjct: 62 DVALLTRLIATADGLIEGFRPGVMERLGLGPEVCIAANPRLVYGRMTGWGQDGPLAGTAG 121
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HD+NY+GLSG L P P L D GGG L +G++ A+ G+G V+D
Sbjct: 122 HDMNYIGLSGALWYGSLPGEPPMAPPTLVGDVGGGALYLVIGMLAAMMNARAGGQGIVVD 181
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+V+GSA++ + L + RG +LLD G H+ Y T DG F++V +E +FY
Sbjct: 182 AAIVDGSAHMMNLLMSLAQSGALAADRGRSLLD-GPHWCRVYRTSDGGFISVQCVEPKFY 240
Query: 243 AQLLAGLGMTEEELPQHEVETGR-------AKLTEKFKEKTQAEWCEIFDNTDACVTPVL 295
A L LG+T + PQ + R +L F + + EW ++F +DACV PV
Sbjct: 241 ALFLDRLGLTAD--PQFASQFDRDVWPGLCDRLAAIFATRPRDEWVKLFAGSDACVGPVF 298
Query: 296 SLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS----RTPGTSKIT-EHN 341
S +A HPH RG+++ GV+ A APR S +TP S + EH+
Sbjct: 299 SPHEAALHPHMAARGTWL-TVDGVLQTAAAPRFSGWEQKTPAKSPMRGEHD 348
>gi|337267535|ref|YP_004611590.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium opportunistum WSM2075]
gi|336027845|gb|AEH87496.1| L-carnitine dehydratase/bile acid-inducible protein F
[Mesorhizobium opportunistum WSM2075]
Length = 361
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 196/359 (54%), Gaps = 16/359 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRID-KHGAQPFV--QDTVGYGKKSLCINLK 59
LKG ++E L PAPF GM+ + GA VI + K P V + + GK+S+ ++LK
Sbjct: 2 LKGTRIVEIEALGPAPFAGMLFADLGADVIVVHRKQAPMPGVPERSLLDRGKRSIALDLK 61
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
A +V+ L +D ++E FR GVME+L LGPD NP+L+Y R++G+GQDGP +
Sbjct: 62 DAADAAVLMRLVATADGLIEGFRPGVMERLGLGPDACLAVNPKLVYGRMTGWGQDGPLAR 121
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+G+SG L P P L D GGG L +G++ A+ G+G
Sbjct: 122 TAGHDMNYIGVSGALWYGSLPGEVPMSPPTLVGDIGGGALYLVIGMLAAIMNARAGGKGS 181
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+GSA++ + L + RG++LLD G H+ Y T DG F+++ +E
Sbjct: 182 VVDAAIVDGSAHMMNLLMSLAPSGALAAERGQSLLD-GPHWCRVYRTADGGFISIQCIEP 240
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGRA-------KLTEKFKEKTQAEWCEIFDNTDACVT 292
+FYA L LG+ + P+ + R +L F EK++ EW ++F+ +DACV
Sbjct: 241 KFYALFLDRLGLAAD--PEFANQFDRDLWPELGNRLAAIFAEKSRGEWVKLFEGSDACVG 298
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVL +A HPH RG+++ G + A APR S S +PA G H E+
Sbjct: 299 PVLGPWEAALHPHMAARGTWL-TVDGALQAAAAPRFSARARCSPAA--SPARGEHDAEI 354
>gi|241763037|ref|ZP_04761098.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
delafieldii 2AN]
gi|241367820|gb|EER62052.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
delafieldii 2AN]
Length = 408
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/368 (39%), Positives = 193/368 (52%), Gaps = 20/368 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VL+ + LAP P+C ++L + GA VI I G + GK + ++LK
Sbjct: 11 LTGVRVLDMSRLAPGPYCTLLLADLGAEVIVIGG-GRAGLPVSSFSRGKHFIALDLKSEA 69
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G + ++ L +DV +E FR GV +L G + L K NP LIY L+GYGQ GP + AG
Sbjct: 70 GRAALQRLVRTADVFVEGFRPGVAGRLGAGYESLSKINPGLIYCSLTGYGQSGPLAQEAG 129
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HD+NYL L+G+L +G N PT P NL ADF GG L+ +GI+ AL+ER +SGRGQ ID
Sbjct: 130 HDLNYLALTGLLGSIGPVNGPPTVPLNLIADFAGGSLVATIGILAALYERVRSGRGQHID 189
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDK----PRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
MV+G L + +W RG L G A +Y Y KDG +++VGALE
Sbjct: 190 AAMVDGCLSL-----MAMHSSVWGSATAPARGRGWLSGAAPYYRCYACKDGLYVSVGALE 244
Query: 239 SQFYAQLLAGL--GMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
QF+A L A L G +++ E A F ++T+ EW F D CV PVLS
Sbjct: 245 PQFFAVLWADLVGGAPPDQMDMAEWPRIEAVFCNAFMQRTRDEWAAHFAGRDVCVFPVLS 304
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVLRHFG 356
+A HPH + R P + PA PR SRTP T T+ + +VL G
Sbjct: 305 SYEAWQHPHILERH---PEASADQMPA-VPRFSRTPLTIAPTDTTD----RSTQVLAAAG 356
Query: 357 YSDANIEE 364
S IE
Sbjct: 357 LSPEEIER 364
>gi|229591224|ref|YP_002873343.1| putative racemase [Pseudomonas fluorescens SBW25]
gi|229363090|emb|CAY50087.1| putative racemase [Pseudomonas fluorescens SBW25]
Length = 391
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 205/387 (52%), Gaps = 19/387 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+RI+ P Q T +
Sbjct: 5 LASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPPHDQGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+A+ L +++ L + D++LE FR GVME+L LG + L NPRLIY ++
Sbjct: 65 NKRSLALDLKQAEALEIVRALVKEYDIVLEQFRPGVMERLGLGYEALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G ++ P P AD GGG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGVASYTGRQDTGPLPLGVQLADVGGGSLHAVVGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R +SG GQ +D +M + S L + + R ++L+GG+ FYD Y ++DG
Sbjct: 185 IARQQSGVGQYLDVSMTDCSFSLNAMAGAGYLACGVEPEREGHVLNGGS-FYDYYRSRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLG---MTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDN 286
R+M+VG+LE F L LG + L + + L +F++++ E C +F
Sbjct: 244 RWMSVGSLEPAFMQPLCDALGRPDLVSMGLRPEQQPALKQALQVEFEKRSFDELCALFAA 303
Query: 287 TDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP 344
DACV PVLSL +A HP RG S +P G A L + G + A
Sbjct: 304 VDACVEPVLSLREAVEHPQLKARGLVSQVPRGDGSTQAQLACPLKFSEGLPEPRHMGAAV 363
Query: 345 GVHTREVLRHFGYSDANIEELIREDVI 371
G H+ EVL G+S IE+L R V+
Sbjct: 364 GAHSDEVLAELGFSAQRIEDLRRARVV 390
>gi|387894341|ref|YP_006324638.1| CoA-transferase, family III [Pseudomonas fluorescens A506]
gi|387161903|gb|AFJ57102.1| CoA-transferase, family III [Pseudomonas fluorescens A506]
Length = 391
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 203/389 (52%), Gaps = 23/389 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPPHDRGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+A+ L +++ L D++LE FR GVME+L LG D L NPRLIY ++
Sbjct: 65 NKRSLALDLKQAEALEIVRELVKGHDILLEQFRPGVMERLGLGYDALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G ++ P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGVASHTGRQDTGPLPLGVQLADVAGGSLHAVVGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R +SG GQ +D +M + S L + + +P EN + G FYD Y T+DG
Sbjct: 185 IARQQSGVGQYLDVSMTDCSFSLNA-MAGAGYLACGVEPGWENHVLNGGSFYDYYRTRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK-----FKEKTQAEWCEIF 284
R+M+VG+LE F QL A LG EL H V R + ++ F++++ + CE+F
Sbjct: 244 RWMSVGSLEPGFMQQLCAALG--RPELAAHSVTPERQAVLKQALQVEFEKRSFDQLCELF 301
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
DACV PVLSLS+A HP R S +P G A L + G
Sbjct: 302 AGVDACVEPVLSLSEAAEHPQLKARELVSQVPRGDGSTQAQLACPLKFSEGLPAPRHIGV 361
Query: 343 APGVHTREVLRHFGYSDANIEELIREDVI 371
A G H+ EVL G+ IE+L + V+
Sbjct: 362 AVGAHSDEVLAELGFGIERIEQLRQAKVV 390
>gi|297618138|ref|YP_003703297.1| L-carnitine dehydratase/bile acid-inducible protein F
[Syntrophothermus lipocalidus DSM 12680]
gi|297145975|gb|ADI02732.1| L-carnitine dehydratase/bile acid-inducible protein F
[Syntrophothermus lipocalidus DSM 12680]
Length = 394
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 202/399 (50%), Gaps = 35/399 (8%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRID------------KHGAQPFVQDTVG 48
+ L+GI VL+ + P P C L +FGA VI+++ K G Q V
Sbjct: 3 LPLQGIRVLDLSMYLPGPLCSQFLADFGAEVIKVEELTGEWGRWVPPKMGKQSARFYAVN 62
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
KKS+ +NLK KG +V + L +DV+LE FR GVM+KL LG L N RLIY +
Sbjct: 63 RNKKSIALNLKTEKGKAVFRKLVATADVLLEQFRPGVMDKLGLGYQQLRGINSRLIYCAI 122
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ GP GHD+NYL L+G+ L G + P AD GG I++A
Sbjct: 123 TGYGQTGPLKMAGGHDLNYLSLAGVTGLTGTKEGKPAMSAAQIADIAGGTHGAVNAILLA 182
Query: 169 LFERSKSGRGQVIDCNMVEGS----AY-LGSWLTRTQDTFLWDKPRGENLLDGGAHFYDT 223
L R KSG GQ D M++G+ AY LG W Q+ RG LL GG Y+
Sbjct: 183 LLGREKSGEGQFCDVAMMDGAINMLAYTLGEWSGAGQEP-----RRGAELLTGGYACYNI 237
Query: 224 YETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLT----EKFKEKTQAE 279
YETKDG+++++GA+E +F+ A +G + +P V+ + ++ E F++ T+ E
Sbjct: 238 YETKDGKYVSLGAIEDKFWQGFCAKIGRL-DFIPLQWVQDKQEEMINAIGEVFRDMTRDE 296
Query: 280 WCEIFDNTDACVTPVLSLSQATSHPHNVHR------GSFIPNRAGVVAPAPAPRLSRTPG 333
W E F ++D C TPVLSL + HP + R F+ + P +LS TPG
Sbjct: 297 WVEFFADSDICFTPVLSLEEMAKHPQVMEREMVIMIDDFLGTGKAMFVPGIPVKLSHTPG 356
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
++ P G HT E+L GY+ I L V++
Sbjct: 357 RVRL--DFPEVGEHTCELLEELGYTSEEISNLKNSGVVQ 393
>gi|222834405|gb|EEE72882.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 163/249 (65%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EFAGL PAPF M+L + GA V+RID+ G + D VG G++++ ++LK
Sbjct: 11 LNGVRVVEFAGLGPAPFACMMLADMGADVVRIDRPGTKARDNDLVGRGRRTVLLDLKAEG 70
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ ++L Q+D+++E FR GVME+L LGPD L NPRL+Y R++G+GQDGP S AG
Sbjct: 71 DIERARSLLAQADILVEGFRPGVMERLGLGPDTLLNINPRLVYGRMTGWGQDGPLSLAAG 130
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINY+ L+G L+ +G + P PP NL D+GGG L +GI+ AL ++G GQVID
Sbjct: 131 HDINYIALTGALAAIGDGDGLPVPPLNLVGDYGGGSLYLLVGILAALHNSRETGHGQVID 190
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
+ +G+ L ++ + L+ + R N+LDGGA +Y TY TKD + + VGA+E QF+
Sbjct: 191 AAICDGAMSLMTFAQSQRLNGLFKEQRSSNMLDGGAPYYTTYRTKDDKVVCVGAIEPQFF 250
Query: 243 AQLLAGLGM 251
A L LG+
Sbjct: 251 ALLCEKLGV 259
>gi|333979740|ref|YP_004517685.1| alpha-methylacyl-CoA racemase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333823221|gb|AEG15884.1| Alpha-methylacyl-CoA racemase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 388
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 200/384 (52%), Gaps = 28/384 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQD-------------TVGY 49
L+ + VL+ L P P+ MIL + GA V++I+ GA ++++ V
Sbjct: 5 LENMKVLDLTRLLPGPYATMILADLGAEVLKIEDPGAGDYMREMGPRLGRESVWFHAVNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
KKS+ +NLK +G V L + +V++E FR GVME+L LG ++L NPRL+Y LS
Sbjct: 65 NKKSMRLNLKAPQGREVFLRLVREFNVVIESFRPGVMERLGLGYEILSSENPRLVYCALS 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQDGPYS GHDINY+ ++G L L G R P P AD GGLM GI+ A
Sbjct: 125 GYGQDGPYSRRPGHDINYMAVAGALGLTGHRAGPPVLPGVQVADL-SGGLMAVAGILAAY 183
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLW---DKPRGENLLDGGAHFYDTYET 226
+ +GRG +D + + SW+T +L + RG L+GG Y+ Y T
Sbjct: 184 VKSLMTGRGAYVDVALTDTVV---SWMTLYLTQYLAGAGEPHRGTEELNGGRTCYNIYAT 240
Query: 227 KDGRFMAVGALESQFYAQLLAGLGMTEEELPQH-EVETGRAKLTEKFKEKTQAEWCEIFD 285
+DG +++VG LE++F+ + G + QH E + R + E F KT+AE E+F
Sbjct: 241 RDGCYVSVGNLEAKFWETFCSVAGRPDLLPLQHREDDEARQAVQEFFSSKTRAEIMELFG 300
Query: 286 NTDACVTPVLSLSQATSHPHNVHRGSF--IPNRAGVVAPAPAPRLSRTPGTSKITEHNPA 343
D C+ PVL +S+ HP R F +P R G + P R ++ PA
Sbjct: 301 TVDTCIEPVLDVSEVPEHPQIKARNLFMELPTREGSITTVAQPLKLR---GVEVKADFPA 357
Query: 344 PGV--HTREVLRHFGYSDANIEEL 365
PG HT E+LR GY + +IE L
Sbjct: 358 PGAGEHTAEILRRLGYREQDIEAL 381
>gi|395796901|ref|ZP_10476194.1| putative racemase [Pseudomonas sp. Ag1]
gi|395338892|gb|EJF70740.1| putative racemase [Pseudomonas sp. Ag1]
Length = 393
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 207/399 (51%), Gaps = 39/399 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+A+ +++++ L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQAEAVAIVRQLVADYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+GI S G ++ P P AD GGG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGIASYTGRQDSGPLPLGVQLADVGGGSLHAVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R SG GQ +D +M + G+ YL + +P EN + G F
Sbjct: 185 IARQHSGVGQYLDVSMTDCAFSLNAMAGAGYLACGV----------EPAWENQVLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETG-RAKLTEKFKEK 275
YD Y +++GR+++VG+LE F QL LG E P+ E + + L +F+++
Sbjct: 235 YDYYRSREGRWLSVGSLEPAFMQQLCTALGRPELAAMGLSPKPEQQKALKLALQVEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
+ E CE+F DACV PVL+LS+A HP RG S +P G A L + G
Sbjct: 295 SFDELCELFAGIDACVEPVLNLSEAVEHPQLKARGLVSQVPRGDGSSQAQIACPLKFSEG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
A G H+ EVL G+S I++L R V++
Sbjct: 355 LPAARHIGAAVGAHSDEVLAELGFSAQQIDDLRRAKVVQ 393
>gi|399009039|ref|ZP_10711485.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM17]
gi|398114048|gb|EJM03883.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM17]
Length = 373
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 204/365 (55%), Gaps = 20/365 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ--------DTVGYGKKSL 54
L G+ ++EF G+ P P GM+L + GA V + + G + D + GK +
Sbjct: 4 LAGLKIVEFEGIGPGPLAGMLLADMGAEVTVVARKGGVALAKQLGGDVGLDILQRGKHRM 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
I+LK+ +G+++ +L Q+D ++E R GVME+L LGP+ NPRLIY RL+G+GQD
Sbjct: 64 VIDLKQPEGVALALDLLAQADALIEGNRPGVMERLGLGPEQCLAKNPRLIYGRLTGWGQD 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHD+NYL L+G+L L G R+ P PP LA D G L A GIV A+FE
Sbjct: 124 GPLAQTAGHDLNYLALTGLLGLTGGRSVPPRPPATLAGD-AIGALGMAFGIVSAVFEARN 182
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
SG+GQV+D +V+ A LGS PR D + FYD ++ DG ++++
Sbjct: 183 SGKGQVVDTAIVDMVAVLGSIAHFIHAAGQIGGPRPSAFYD--SPFYDLFQCADGEWISL 240
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDA 289
LE QFYA+L+ L + + LP + + + +LT F + +A WC + + +DA
Sbjct: 241 APLEPQFYAELVGRLELA-DVLPAAQYDLVHWPALKERLTLLFGSQPRAHWCALLEGSDA 299
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSK-ITEHNPAPGVHT 348
C PVLS S+A HPHNV RG F V+ PAPR SRTPGT + + PAP + T
Sbjct: 300 CFAPVLSPSEAAVHPHNVARGIF--QVEPVIQANPAPRFSRTPGTVRHVDSREPAPLLAT 357
Query: 349 REVLR 353
R
Sbjct: 358 VAAQR 362
>gi|388468834|ref|ZP_10143044.1| CoA-transferase, family III [Pseudomonas synxantha BG33R]
gi|388012414|gb|EIK73601.1| CoA-transferase, family III [Pseudomonas synxantha BG33R]
Length = 391
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 203/398 (51%), Gaps = 41/398 (10%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+RI+ P Q T +
Sbjct: 5 LASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPPHDQGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+A+ + +++ L D++LE FR GVME+L LG + L NP LIY ++
Sbjct: 65 NKRSLALDLKQAEAVEIVRELVKGHDILLEQFRPGVMERLGLGYEALKAINPGLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R+ P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGVASHTGRRDSGPLPLGVQLADVAGGSLHAVVGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R +SG GQ +D +M + G+ YL L +P EN + G F
Sbjct: 185 IARQQSGVGQYLDVSMTDCSFSLNAMAGAGYLACGL----------EPEWENHVLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVE-----TGRAKLTEKFKEK 275
YD Y T+DGR+M+VG+LE F QL LG EL H V+ + L +F+++
Sbjct: 235 YDYYRTRDGRWMSVGSLEPAFMQQLCEALG--RPELAAHSVKPEQQGALKQALQVEFEKR 292
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
+ E CE+F DACV PVLSL++A HP R S +P G A L + G
Sbjct: 293 SFEELCELFAGVDACVEPVLSLAEAVEHPQLKARALVSHVPRGDGSTQAQLACPLKFSEG 352
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
A G H+ EVL G+ I+EL + V+
Sbjct: 353 LPAPRHIGVAVGAHSDEVLVELGFGAQRIDELRQAKVV 390
>gi|398938085|ref|ZP_10667574.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM41(2012)]
gi|398166278|gb|EJM54379.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM41(2012)]
Length = 393
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 202/389 (51%), Gaps = 21/389 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L V+K L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPEALEVIKQLLQDYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGLASYTGHADSGPLPLGMQVADIAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R ++G+GQ +D +M + L + + R E +L+GG+ FYD Y ++DG
Sbjct: 185 IARQQTGQGQHLDVSMTDCVFSLNAMAGAGYLACGEEPGREEQMLNGGS-FYDYYRSRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETG-RAKLTEKFKEKTQAEWCEIF 284
R+ +VG+LE F QL A LG+ E E P+ ++ + L +F+ AE C +F
Sbjct: 244 RWFSVGSLEPAFMKQLCAALGLEELETLGLSPEPALQKALKNALRIEFETHDFAELCALF 303
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
DACV PVLSLS+A HP R + +P G A L + G +
Sbjct: 304 ATLDACVEPVLSLSEAVRHPQLKARALVTEVPRGDGTTQAQMACPLKFSDGLPEPRHIGA 363
Query: 343 APGVHTREVLRHFGYSDANIEELIREDVI 371
A G HT +VL GYS I EL R V+
Sbjct: 364 AIGQHTDQVLGELGYSAERIAELRRAKVV 392
>gi|192289954|ref|YP_001990559.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris TIE-1]
gi|192283703|gb|ACF00084.1| L-carnitine dehydratase/bile acid-inducible protein F
[Rhodopseudomonas palustris TIE-1]
Length = 383
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 183/334 (54%), Gaps = 14/334 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
L G+ VL+ + LAP P+ M+L + GA VI + G P + GK+ + ++LK A
Sbjct: 9 LAGVRVLDMSRLAPGPYATMLLGDLGADVIVVTGGRGGAP--AECFARGKRFVALDLKAA 66
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
+G + + LA ++DV +E FR GV ++L G L NPRL+Y L+GYGQDGP + A
Sbjct: 67 EGRTALHKLAAEADVFVESFRPGVADRLGAGYAELSSLNPRLVYCALTGYGQDGPLAQEA 126
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHD+NYL ++G+L +G +R PT P NL ADF G +G++ AL+ER +SG+GQ +
Sbjct: 127 GHDLNYLAVTGVLGAIGPHDRPPTAPLNLIADFASGSFNAVIGVLAALYERERSGKGQFV 186
Query: 182 DCNMVEGSAYLGSWLTRT--QDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
D M++G L QD RG + G A +Y YE DGR++A+GALE
Sbjct: 187 DAAMIDGCMSLMGMFASVWGQDVL---PSRGRGWISGEAPYYRCYECADGRYIAIGALEP 243
Query: 240 QFYAQLLAGL--GMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSL 297
QF+A L A L G ++ + + + F+ + W + D CV+PVLS
Sbjct: 244 QFFAALWADLGGGAPPDQFDLTQWPAIEQRFADTFRTAPRDHWAARYAGRDVCVSPVLSP 303
Query: 298 SQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRT 331
+ + PH HR P+ + VAP+ PR RT
Sbjct: 304 DEVWAQPHIKHR---FPDASPDVAPS-FPRFGRT 333
>gi|423692211|ref|ZP_17666731.1| CoA-transferase, family III [Pseudomonas fluorescens SS101]
gi|388000103|gb|EIK61432.1| CoA-transferase, family III [Pseudomonas fluorescens SS101]
Length = 391
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 202/389 (51%), Gaps = 23/389 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPPHDRGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+A+ L +++ L D++LE FR GVME+L LG + L NPRLIY ++
Sbjct: 65 NKRSLALDLKQAEALEIVRELVKGYDILLEQFRPGVMERLGLGYEALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G ++ P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGVASHTGRQDTGPLPLGVQLADVAGGSLHAVVGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R +SG GQ +D +M + S L + + +P EN + G FYD Y T+DG
Sbjct: 185 IARQQSGVGQYLDVSMTDCSFSLNA-MAGAGYLACGVEPGWENHVLNGGSFYDYYRTRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK-----FKEKTQAEWCEIF 284
R+M+VG+LE F QL LG EL H V R + ++ F++++ + CE+F
Sbjct: 244 RWMSVGSLEPGFMQQLCEALG--RPELAAHSVTPERQAVLKQALQVEFEKRSFDQLCELF 301
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
DACV PVLSLS+A HP R S +P G A L + G
Sbjct: 302 AGVDACVEPVLSLSEAVEHPQLKARELVSQVPRGDGSTQAQLACPLKFSEGLPAPRHIGV 361
Query: 343 APGVHTREVLRHFGYSDANIEELIREDVI 371
A G H+ EVL G S I+EL + V+
Sbjct: 362 AVGAHSDEVLVELGISAQRIDELRQAKVV 390
>gi|407939590|ref|YP_006855231.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. KKS102]
gi|407897384|gb|AFU46593.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. KKS102]
Length = 358
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 193/354 (54%), Gaps = 30/354 (8%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH----GAQPF---VQDTVGYGKKS 53
+ L G+ V+EF G+ P P +L + GA VI + + GAQ V++ + GKK
Sbjct: 10 LPLHGVRVVEFEGIGPGPLAARMLVDMGAEVIALARAEQAAGAQRLGGTVENPLHRGKKV 69
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
I+LK G + L Q+D ++E FR GVME+L GP NPRL+Y R++G+GQ
Sbjct: 70 EVIDLKSPGGKARALELIAQADALIEGFRPGVMERLGFGPADCAARNPRLVYGRMTGWGQ 129
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
DGP + AGHD+NY+ L+G+LSL R + P P ++ D G G L A GI AL +
Sbjct: 130 DGPLAQAAGHDLNYVALTGLLSLSAHRGQAPIVPPSVLGD-GAGALGMAFGIACALVDAR 188
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGG-------AHFYDTYET 226
+GRG+V+D +V+ A LG+ + W + G+ +DG + FYD Y
Sbjct: 189 ATGRGRVVDAAIVDIVAMLGTLVH-------WIRANGQ--IDGAQPSPFHDSPFYDVYVC 239
Query: 227 KDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWC 281
DG F+++GA+E FYA LL+ LG+ + P + +T + ++ + + QA WC
Sbjct: 240 ADGGFISLGAIEPPFYALLLSKLGLADVN-PADQYDTAAWPALKERIAALIRTQPQAHWC 298
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
+ + +DAC PVLSL++A HPHN RG + G + APAPR T+
Sbjct: 299 ALLEGSDACFAPVLSLAEAVRHPHNAVRGIYQTTSFGAIEAAPAPRFQALNATT 352
>gi|254461142|ref|ZP_05074558.1| alpha-methylacyl-CoA racemase [Rhodobacterales bacterium HTCC2083]
gi|206677731|gb|EDZ42218.1| alpha-methylacyl-CoA racemase [Rhodobacteraceae bacterium HTCC2083]
Length = 359
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 187/336 (55%), Gaps = 14/336 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY---GKKSLCINLK 59
L GI ++E GL PAPF GM+L + GA V I + G V G GK+S+ ++LK
Sbjct: 2 LNGIKIVEIEGLGPAPFAGMMLADLGAEVTVIHRAGKLAGVTAEAGLLDRGKRSIALDLK 61
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ L+V K L Q+D ++E FR GVME+L LGP++ NP+L+Y R++G+GQ GP +
Sbjct: 62 NVEDLAVAKALIAQADGVIEGFRPGVMERLGLGPELCLTDNPKLVYGRMTGWGQSGPRAH 121
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY+ SG L G + P P L D GGG L G++ + + +++G+G
Sbjct: 122 QAGHDLNYIATSGALYYAGLPDDAPVTPATLLGDIGGGALYLVAGMLAGIIKSARTGQGT 181
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+GSA++ + L + RG +LLD G H+ TY G ++V ALE
Sbjct: 182 VVDAAIVDGSAHMMNLLMALGQGGGLSEERGASLLD-GPHWSRTYRCACGGDVSVQALEP 240
Query: 240 QFYAQLLAGLGMTEE-------ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
QFYA LL LG+ ++ + Q V+T A+L F EK++A W FD +DACV
Sbjct: 241 QFYAALLTALGLNDDPGMQAQHDARQWSVQT--ARLGAIFLEKSRAYWTTHFDGSDACVA 298
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
VL A PH R + + G + APAPR
Sbjct: 299 AVLPPQAAAEEPHMKARNVW-DSAQGYLQAAPAPRF 333
>gi|408481319|ref|ZP_11187538.1| putative racemase [Pseudomonas sp. R81]
Length = 393
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 205/389 (52%), Gaps = 21/389 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+RI+ P Q T +
Sbjct: 5 LASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPPHDQGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+A+ L +++ L N D++LE FR GVM++L LG + L NPRLIY ++
Sbjct: 65 NKRSLALDLKQAEALEIVRVLVNDYDILLEQFRPGVMDRLGLGYEALKAINPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G ++ P P AD GGG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGVASYTGRQDAGPLPLGVQLADVGGGSLHAVVGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R +SG GQ +D +M + S L + + +P E+ + G FYD Y ++DG
Sbjct: 185 IARQQSGVGQYLDVSMTDCSFSLNA-MAGAGYLACGVEPEWESHVLNGGSFYDYYRSRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETG-RAKLTEKFKEKTQAEWCEIF 284
R+M+VG+LE F QL LG E P+ E + + L +F++++ E C +F
Sbjct: 244 RWMSVGSLEPAFMQQLCTALGRPELAAQGLSPKPEQQKALKQALQVEFEKRSFDELCALF 303
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
TDACV PVL+LS+A +HP R S +P G A L + G
Sbjct: 304 AATDACVEPVLTLSEAVAHPQLKARALVSQVPRGDGSTQSQLACPLKFSDGLPAPRHIGV 363
Query: 343 APGVHTREVLRHFGYSDANIEELIREDVI 371
A G H+ EVL G S I EL + V+
Sbjct: 364 AVGAHSDEVLVELGLSAQRIAELRQAKVV 392
>gi|308464505|ref|XP_003094519.1| hypothetical protein CRE_04285 [Caenorhabditis remanei]
gi|308247320|gb|EFO91272.1| hypothetical protein CRE_04285 [Caenorhabditis remanei]
Length = 358
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 194/349 (55%), Gaps = 31/349 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L GI V+E GLAP P CGM+L +FGA V IDK P V+ + GK +L++ +
Sbjct: 5 LSGIKVVELGGLAPVPHCGMLLADFGADVTVIDK--KSPTVEQRMNRGKTMKEFDLREPE 62
Query: 63 GL---------------SVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYAR 107
+ S +++L SDV+L+P+R G +EK+ L P L N LI R
Sbjct: 63 DIKKVSHSFFFQPKNYFSQVRDLCRTSDVLLDPYRPGTLEKMGLDPLSLWDENKGLIICR 122
Query: 108 LSGYGQDGPYSSMAGHDINYLGLSGIL-SLLGWRNRNPTPPCNLAADFGGGGLMCALGIV 166
+SGYGQ G + AGHDINY+ LSG+L + G P PP N+ ADF GGGL A GIV
Sbjct: 123 ISGYGQTGRMKNEAGHDINYVALSGMLPTFAGAEASRPWPPVNMLADFAGGGLTAAFGIV 182
Query: 167 MALFERSKS-GRGQVIDCNMVEGSAYLGSWLTRTQD-TFLWDKPRGENLLDGGAHFYDTY 224
A+ R+ + G+G V+DC+M EG+AYL S++ D T L+ G Y TY
Sbjct: 183 SAIHARTHNGGKGCVLDCSMTEGTAYLASFVQHYYDQTHLFTDKYAA--FTGECPIYRTY 240
Query: 225 ETKDGRFMAVGALESQFYAQLLAGLGMTEEEL---PQHEVETGRAKLTEKFKEKTQAEWC 281
+TKDG+FMAVG LE +F+ + LG+ ++L P+ ++ L + F KT+ EW
Sbjct: 241 KTKDGKFMAVGPLEPKFHQNMFEVLGVDGDDLFTNPKKIIKL----LEDTFMTKTRDEWS 296
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNR--AGVVAPAPAPRL 328
+IF+ D CVTPVL + + ++ +V R +F + G P+PR+
Sbjct: 297 KIFEGKDCCVTPVLDIHEVGTYGQHVDRQNFTKSDKFGGTWIAKPSPRV 345
>gi|320577026|gb|ADW54022.1| alpha-methylacyl CoA racemase [Anisakis simplex]
Length = 418
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/344 (39%), Positives = 199/344 (57%), Gaps = 27/344 (7%)
Query: 3 LKGITVLEFAGL-------APAPFCGMILNEFGA--TVIRIDKHGAQPFVQDTVGYGKKS 53
L G+ V+E +GL A P+CG+IL +FGA TV++ +H P+ + GK
Sbjct: 67 LHGLKVIELSGLPAIPTGVAVVPYCGLILADFGAEVTVVKKAEHELLPY---RLARGKTI 123
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
+NL++AK ++N+ +SDV+L+P+R GV+EK+ L P L K N +LI AR++G+GQ
Sbjct: 124 KVVNLERAKDNKHVRNMCLESDVLLDPYRPGVIEKVGLNPLELLKENEKLIVARITGFGQ 183
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTP---PCNLAADFGGGGLMCALGIVMALF 170
G S G ++NY+ LSG++ + P P N+ A F GG LM A GI+ A+
Sbjct: 184 TGELSQRFGRELNYVALSGLMPTFAGHSVKRFPYWTPANMLAGFAGGSLMAAFGILAAIH 243
Query: 171 ER-SKSGRGQVIDCNMVEGSAYLGSWLTRTQDT-FLWDKPRGENLLDGGAHFYDTYETKD 228
+R G+G +ID +MV+G AYLGS+ T +D +W+KP + G Y YET D
Sbjct: 244 QRIINGGKGSIIDVSMVDGLAYLGSFQTIYKDIDNVWNKPF--SWFSGDCPVYRCYETSD 301
Query: 229 GRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIF 284
G+FMAV ALE +F+ ++L L E +P ++ T A++TEK FK KT+ EW EIF
Sbjct: 302 GKFMAVAALERRFHTKMLQVL---EVNIPVSDIWTKPAEVTEKLEAVFKTKTRREWMEIF 358
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
DACVTPV+ L++ H+ R SF + P P PR+
Sbjct: 359 RGVDACVTPVVGLNEVGRIRHHQQRKSFKLEGHKFI-PQPTPRI 401
>gi|302557140|ref|ZP_07309482.1| alpha-methylacyl-CoA racemase [Streptomyces griseoflavus Tu4000]
gi|302474758|gb|EFL37851.1| alpha-methylacyl-CoA racemase [Streptomyces griseoflavus Tu4000]
Length = 363
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 173/310 (55%), Gaps = 5/310 (1%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L G+ V+E AG+ P PF M+L + GA V+R+D+ G D K+S+ ++L
Sbjct: 12 LNGVRVVELAGIGPGPFAAMLLADLGADVVRVDRPGGPGLGIDPALDVTNRNKRSVIVDL 71
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K G + + +LA ++DV++E +R GV E+L +GP NPRL+Y R++G+GQ GP +
Sbjct: 72 KDPGGPARVLDLAERADVLIEGYRPGVAERLGVGPGDCHARNPRLVYGRMTGWGQQGPLA 131
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHDI Y+ L+G L ++G +R P P NL D+ GG L +G++ AL +G G
Sbjct: 132 DRAGHDIAYIALTGTLGMIGDPDRPPAVPANLLGDYAGGSLYLVVGVLAALHHARATGAG 191
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
QV+D +V+G+A+L + + W RG NLLDGG +Y TY T DGR MAVGALE
Sbjct: 192 QVVDAAIVDGTAHLSAMIHGMLAAGAWQDRRGANLLDGGCPYYGTYGTADGRHMAVGALE 251
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVTPVLSLS 298
+FYA+ L+ LG+ EE H T + KL E+ + ++ + TP
Sbjct: 252 PRFYAEFLSLLGL-EEPAGAHTDVTRKPKLRERVAARFRSAPATPGRPSSTAPTPAWRPC 310
Query: 299 QATSHPHNVH 308
++ P
Sbjct: 311 SPSARPRTTR 320
>gi|121592547|ref|YP_984443.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. JS42]
gi|120604627|gb|ABM40367.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
sp. JS42]
Length = 370
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 195/369 (52%), Gaps = 18/369 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG----YGKKSLCINL 58
L + VLE GL P PFC M L + GA VI + + ++T G GK+S+ +L
Sbjct: 4 LDSVRVLEIGGLGPGPFCAMHLADLGADVISVVRETKG---RETTGALLNRGKRSVFADL 60
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ L ++D ++E R GVME+L LGP+ NPRL+Y R++G+GQ GP +
Sbjct: 61 KTEEGRQLVLALVAEADALIEGMRPGVMERLGLGPEECMAVNPRLVYGRMTGWGQSGPLA 120
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD NY +SG L + P P + D GGG + G++ + + +GRG
Sbjct: 121 PRAGHDTNYAAVSGALWGCSPADARPVSPFAVLGDIGGGAMYLMTGLLSGIVQARATGRG 180
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D +V+GSA++ + + + + L RG+++ D A FYDTY DG ++ VGA+E
Sbjct: 181 TVVDAAIVDGSAHMLNLMLSARQSGLVADVRGQSIHD-SAPFYDTYVCADGHYVTVGAIE 239
Query: 239 SQFYAQLLAGLGMTEE------ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
QFY LL LG+ E+ + + RA+L F + +A W + + TDAC
Sbjct: 240 PQFYTLLLQVLGLAEDPDFTGSQWDKAAWPVRRARLAALFLAQPRAHWQALLEPTDACFG 299
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
VLS +A HPH RG + R GV+ APAPR G + APG HT+ V+
Sbjct: 300 VVLSPVEAAQHPHMRARGVY-SERQGVLQAAPAPRFD---GAAYEPGEACAPGAHTQSVM 355
Query: 353 RHFGYSDAN 361
G S A
Sbjct: 356 EGLGQSGAR 364
>gi|357023467|ref|ZP_09085659.1| alpha-methylacyl-CoA racemase [Mesorhizobium amorphae CCNWGS0123]
gi|355544642|gb|EHH13726.1| alpha-methylacyl-CoA racemase [Mesorhizobium amorphae CCNWGS0123]
Length = 371
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 196/368 (53%), Gaps = 22/368 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ---PFVQDTVGYGKKSLCINLK 59
L G+ ++E AGL P PFCGM+L + GA VI I++ A P GK+S+ ++LK
Sbjct: 4 LSGVKIIEIAGLGPGPFCGMLLADLGADVISIERPDADVGAPRPWAVCSRGKRSIVLDLK 63
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
K + + L +D ++E R GVME+L LGP+V L+Y R++G+GQ+GP
Sbjct: 64 KPAAVETVLQLVENADALIEGMRPGVMERLGLGPEVCHARCSSLVYGRMTGWGQNGPLVQ 123
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD NY G+SG L L + P P L D GG L A+GI+ + + GRGQ
Sbjct: 124 AAGHDGNYTGISGALWLATPPGQAPEGPPTLLGDVAGGALYLAVGILAGILRARQDGRGQ 183
Query: 180 VIDCNMVEGSAYLGSW-LTRTQDTFLWDKPRGENLLDGGAHFYD-TYETKDGRFMAVGAL 237
V+D M++GSA+L + ++ + RG+ G F+D Y+ DG ++ + +
Sbjct: 184 VVDAAMIDGSAHLLNLAISFIHLDLGGEFARGKPTASG--MFWDRAYQCADGEWVVIQPV 241
Query: 238 ESQFYAQLLAGLGMTEEE-------LPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
E FYA+L+ LG ++ P+ G +L E FK KT+AEW + + TD+C
Sbjct: 242 EPHFYAELIRRLGFDNDQRFVNGQRTPELWATLGN-ELAEHFKTKTRAEWTALLEGTDSC 300
Query: 291 VTPVLSLSQATSHPHNVHRGSF--IPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHT 348
PVLS +A SHP + RG + I N V+ APAPR S TP S P G HT
Sbjct: 301 FAPVLSPEEAASHPQVIARGIYKRIDN---VLQAAPAPRFSLTP--SPELGSVPPRGAHT 355
Query: 349 REVLRHFG 356
E+L G
Sbjct: 356 EEILAELG 363
>gi|399521086|ref|ZP_10761854.1| alpha-methylacyl-CoA racemase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399110997|emb|CCH38413.1| alpha-methylacyl-CoA racemase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 393
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 203/398 (51%), Gaps = 51/398 (12%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVGY 49
L + +L+F+ L P PF ++L + GA V+R++ G +
Sbjct: 5 LSSLKILDFSTLLPGPFASLLLADMGAEVLRVESPTRMDLIRVLPPHDGGASTSHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ + + V+K L ++ D++LE FR GVM+KL +G L NPRLIY ++
Sbjct: 65 NKRSIALDLKRPEAVEVVKRLVSEYDIVLEQFRPGVMDKLGVGYAALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINY L+GI S G R+ P P AD GG L +G++ A+
Sbjct: 125 GYGQSGPYRDRAGHDINYQALAGIASYTGRRDSGPLPLGVQLADLAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
+R +G GQ +D ++ + G+ YLG+ + +P EN G F
Sbjct: 185 VQRQATGVGQQVDVSITDCVFSLHGMAGAGYLGAGV----------EPDMENQALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTE---EELPQH-EVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E L Q EV+ + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSQKPEVQRALKREIEIEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIP-NRAGVVAPAPAPRLSRTPGT 334
A+WCE+F DACV P+LSL++A HP RG + R G+ P S+
Sbjct: 295 DFAQWCEVFAELDACVEPMLSLAEAVEHPQIKARGLVVEVPRGGL------PAQSQLACP 348
Query: 335 SKITEHNPAP-------GVHTREVLRHFGYSDANIEEL 365
K +E P P G HT +VL GY I L
Sbjct: 349 LKFSEGLPPPRHVGTAVGAHTEQVLLELGYDAEQIAAL 386
>gi|452126992|ref|ZP_21939575.1| L-carnitine dehydratase/bile acid-inducible protein F [Bordetella
holmesii F627]
gi|452130365|ref|ZP_21942937.1| L-carnitine dehydratase/bile acid-inducible protein F [Bordetella
holmesii H558]
gi|451920290|gb|EMD70436.1| L-carnitine dehydratase/bile acid-inducible protein F [Bordetella
holmesii H558]
gi|451922087|gb|EMD72232.1| L-carnitine dehydratase/bile acid-inducible protein F [Bordetella
holmesii F627]
Length = 394
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 179/316 (56%), Gaps = 18/316 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-HGAQPFVQDTVGYGKKSLCINLKKA 61
L+G+ +++ + LAP P+C M+L + GA VI + P T GK + ++LK
Sbjct: 18 LEGVRIIDMSRLAPGPYCTMLLADLGAEVIVVGGGRAGNPIA--TFSRGKHFIKLDLKTE 75
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G + ++ L +DV +E FR GV ++L G + L + NP L+Y ++GYGQDGP + A
Sbjct: 76 AGQAALQRLCQTADVFVESFRPGVCDRLGAGYETLSQQNPGLVYCSVTGYGQDGPLAQEA 135
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDI+YL L+G+L +G + P+ P NL ADF G + ALGIV ALF+R+++G+GQ +
Sbjct: 136 GHDISYLALTGVLGAIGPADGPPSVPLNLLADFAAGSFIAALGIVAALFDRTRTGKGQYV 195
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKP----RGENLLDGGAHFYDTYETKDGRFMAVGAL 237
D M++G L +W P RG+ LL GGA +Y YE DG++++VGAL
Sbjct: 196 DAAMIDGCLSL-----LAMHWPVWQTPILPARGQGLLAGGAPYYRCYECADGKYVSVGAL 250
Query: 238 ESQFYAQLLAGLGMTEEELPQHE----VETGRAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E QF+ L L E E P H R + +F+EKT+ +W +F +AC+ P
Sbjct: 251 EPQFFINLWRTL--FESEPPDHMDMRLWPAIRERFDARFREKTRDQWAGLFAGKEACLMP 308
Query: 294 VLSLSQATSHPHNVHR 309
VLS + PH V R
Sbjct: 309 VLSPEEVWRQPHIVAR 324
>gi|392427717|ref|YP_006468711.1| putative acyl-CoA transferase/carnitine dehydratase
[Desulfosporosinus acidiphilus SJ4]
gi|391357680|gb|AFM43379.1| putative acyl-CoA transferase/carnitine dehydratase
[Desulfosporosinus acidiphilus SJ4]
Length = 393
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 211/394 (53%), Gaps = 26/394 (6%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ------PFVQDT------VG 48
+ L+GI VL+ + P P IL +FGA VI+I++ + P + DT V
Sbjct: 3 LPLEGIKVLDLSRYLPGPLATQILADFGAEVIKIEEPKGELGRYLPPLINDTSARFYTVN 62
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
KKS+ +NLK +G + K + +DV+L+ FR VM KL LG + L + NPR+IY L
Sbjct: 63 RNKKSVSLNLKHPEGKKIFKKMVANADVVLDQFRPDVMNKLGLGYESLKEINPRIIYCIL 122
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYG GP + AGHDINYL +G+ L+G P AD GG L + I++A
Sbjct: 123 TGYGLTGPMRNAAGHDINYLNTAGVTELMGTTGGPPAMCGVQIADTAGGSLYSVIAILLA 182
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKP-RGENLLDGGAHFYDTYETK 227
L R K+G+GQ+ D M++G+ L ++ D P RG LL GG Y+ Y+ K
Sbjct: 183 LAARGKTGKGQLCDVAMMDGAISLLAYTIGEWSGGNGDLPIRGGELLTGGYATYNNYKCK 242
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEI 283
D +F+++GA+ES+F+A LG+ EE +P ++ + K+ ++ KT+ EW E
Sbjct: 243 DSKFVSLGAVESKFWAGFCKKLGL-EEFIPLQLEKSSQTKVKNSIEKIMLTKTRDEWVEF 301
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHR------GSFIPNRAGVVAPAPAPRLSRTPGTSKI 337
F ++D C TP+L+L + HP + R F + +V +LS TPG +K+
Sbjct: 302 FSDSDICFTPILTLDEMVKHPQVLARKMVHTLADFQGSGKDIVCTGVPIKLSETPGEAKM 361
Query: 338 TEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
+ G +T E+L+ GY IE+L RE ++
Sbjct: 362 --NFARIGENTDELLQAIGYGLEQIEQLRREGIV 393
>gi|70731812|ref|YP_261554.1| family III CoA-transferase [Pseudomonas protegens Pf-5]
gi|68346111|gb|AAY93717.1| CoA-transferase, family III [Pseudomonas protegens Pf-5]
Length = 393
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 204/406 (50%), Gaps = 55/406 (13%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDAGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L V++ L D++LE FR GVME+L LG L NPRLIY ++
Sbjct: 65 NKRSLALDLKRPEALEVVRQLVQDYDIVLEQFRPGVMERLGLGYQALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R++ P P AAD GG L +G++ A+
Sbjct: 125 GYGQTGPYRDRAGHDINYLALAGLASQTGRRDQGPLPLGIQAADIAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R SG+GQ +D +M + G+ YL + +P E + G F
Sbjct: 185 IARQHSGQGQYLDVSMTDCVFSLNAMAGAGYLACGV----------EPGMEQQVLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKE 274
YD Y ++DGR+++VG+LE F QL LG E LP+ + +A E F++
Sbjct: 235 YDYYRSRDGRWLSVGSLEPVFMQQLCQALGRPELVAQGLSPLPEQQQALKQALQVE-FEK 293
Query: 275 KTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTP 332
AE C++F DACV PVLSL +A HP R S +P G R ++
Sbjct: 294 HDFAELCQLFAGFDACVEPVLSLGEALEHPQLQARQLVSQVPREDG-------SRQAQMA 346
Query: 333 GTSKITEHNPAP-------GVHTREVLRHFGYSDANIEELIREDVI 371
K +E P P G H+ +VL GYS IE L RE VI
Sbjct: 347 CPLKFSEGLPEPRHIGARLGAHSDQVLEELGYSAERIEALRRERVI 392
>gi|395652679|ref|ZP_10440529.1| putative racemase [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 393
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 200/398 (50%), Gaps = 39/398 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+RI+ P Q T +
Sbjct: 5 LASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPPHDQGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+A + ++ L D++LE FR GVME+L LG + L NPRLIY ++
Sbjct: 65 NKRSLALDLKQAAAVEIVHALVKDYDIVLEQFRPGVMERLGLGYEALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R+ P P AD GGG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGVASYTGRRDSGPLPLGVQLADVGGGSLHAVVGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R SG GQ +D +M + G+ YL + +P E+ + G F
Sbjct: 185 VARQSSGVGQYLDVSMTDCTFSLNAMAGAGYLACGV----------EPEWESHVLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEE----LPQHEVE-TGRAKLTEKFKEK 275
YD Y ++DGR+M+VG+LE F QL A LG E P E + + L +F+++
Sbjct: 235 YDYYRSRDGRWMSVGSLEPAFMQQLCAALGCPELAGQGLSPSPEAQKVLKLALQVEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
+ E C +F DACV PVL LS+A HP R S +P G A L + G
Sbjct: 295 SFDELCALFAGVDACVEPVLRLSEAVEHPQLKARALVSQVPRADGSTQAQIACPLKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
+ A G H+ EVL G+S I EL VI
Sbjct: 355 LPEPRHIGAAVGAHSDEVLGELGFSPRQISELRHARVI 392
>gi|119718345|ref|YP_925310.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardioides
sp. JS614]
gi|119539006|gb|ABL83623.1| L-carnitine dehydratase/bile acid-inducible protein F [Nocardioides
sp. JS614]
Length = 381
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 205/372 (55%), Gaps = 22/372 (5%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKA 61
AL G+ V++ + AP P+ M+L GA V+ + G + GK+ + ++L+
Sbjct: 8 ALAGVRVVDLSRNAPGPYASMLLARLGAEVVTV-AGGRTGEALPELAMGKRQITLDLRSG 66
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
G+ ++ L ++DV+LE FR GV+++L +G + L NPRL+Y L+GYGQ G + A
Sbjct: 67 DGVRALERLVAEADVLLESFRPGVLDRLGVGYEHLAALNPRLVYCALTGYGQQGRLRAAA 126
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINYL ++G+L LG PP NL AD GGGGL A G++ AL ERS++GRG+ +
Sbjct: 127 GHDINYLAVTGVLGCLGPAGEPAVPPINLVADMGGGGLWAAFGVLAALHERSRTGRGRFV 186
Query: 182 DCNMVEGS-AYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQ 240
D +MV+G + +G+W+T + + RGE L+ G A FY Y DG ++AVGA+E +
Sbjct: 187 DASMVDGVLSMMGTWMTAWGTSIM--PARGEGLMSGKAPFYRCYRCGDGEWVAVGAIEPR 244
Query: 241 FYAQLLAGLGMTEEELPQHEVETGR----AKLTEKFKEKTQAEWCEIFDNTDACVTPVLS 296
F+ +L +G+ E P H G A+L F + + EW ++ + + C+TPVL+
Sbjct: 245 FFRELWRVVGLPGEP-PDHLDPAGWPDLGARLEAVFATRDRDEWADLASD-ECCLTPVLA 302
Query: 297 LSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP--APGVHTREVLRH 354
+ HPH+ R +P A V APA R S NP A G T +LR+
Sbjct: 303 PDEVRRHPHHRDR---LPQGADV---APAELFPRVDWLSA----NPWVADGDETEAILRN 352
Query: 355 FGYSDANIEELI 366
G + + ++
Sbjct: 353 AGLDEDTLARVV 364
>gi|421504056|ref|ZP_15951000.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina DLHK]
gi|400345157|gb|EJO93523.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina DLHK]
Length = 393
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 202/400 (50%), Gaps = 55/400 (13%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVGY 49
L + VL+F+ L P PF ++L + GA V+R++ G +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGAEVLRVESPTRMDLVRVLPPHDGGTSTSHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ + + V+K L + D++LE FR GVM+KL +G + L NPRLIY ++
Sbjct: 65 NKRSIALDLKRPEAVEVVKKLVAEYDIVLEQFRPGVMDKLGVGYEALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+GI S G R+ P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRDRAGHDINYLALAGIASYTGRRDSGPLPLGVQLADIAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
+R +G+GQ +D +M + G+ YLG+ + +P EN G F
Sbjct: 185 VQRQVTGQGQQVDVSMTDCAFSLHGMAGAGYLGAGV----------EPEMENQALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q LG E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCQALGRPELAARGLSPKPEDQRALKREIEIEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
A+WCE F DACV P+L LS+A HP I RA +VA P L P +
Sbjct: 295 DFADWCERFAALDACVEPMLPLSEALEHPQ-------IKARA-LVAEVPREGLPAQPQLA 346
Query: 336 ---KITEHNPAP-------GVHTREVLRHFGYSDANIEEL 365
K + PAP G HT +VL GY I L
Sbjct: 347 CPLKFSHGLPAPRHVGAALGAHTAQVLAELGYDAEQIATL 386
>gi|395494505|ref|ZP_10426084.1| putative racemase [Pseudomonas sp. PAMC 25886]
Length = 393
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 205/400 (51%), Gaps = 41/400 (10%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+A+ +++++ L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQAEAVAIVRQLVADYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+GI S G ++ P P AD GGG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGIASYTGRQDSGPLPLGVQLADVGGGSLHAVVGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R +SG GQ +D +M + G+ YL + +P EN + G F
Sbjct: 185 IARQQSGVGQYLDVSMTDCAFSLNAMAGAGYLACGV----------EPAWENQVLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKE 274
YD Y +++GR+++VG+LE F QL LG E P+ + +T + L +F++
Sbjct: 235 YDYYRSREGRWLSVGSLEPAFMQQLCTALGRPELAAQGLSPKPEQQ-KTLKLALQVEFEK 293
Query: 275 KTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTP 332
++ E C +F DACV PVL LS+A HP R S +P G A L +
Sbjct: 294 RSFDELCALFAGIDACVEPVLGLSEAVEHPQLKARELISQVPRGDGSAQAQIACPLKFSE 353
Query: 333 GTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
G A G H+ EVL G+ I++L R VI+
Sbjct: 354 GLPAARHIGAALGAHSDEVLAELGFGAQQIDDLRRAKVIQ 393
>gi|421141482|ref|ZP_15601467.1| hypothetical protein MHB_19098 [Pseudomonas fluorescens BBc6R8]
gi|404507491|gb|EKA21476.1| hypothetical protein MHB_19098 [Pseudomonas fluorescens BBc6R8]
Length = 393
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 205/399 (51%), Gaps = 39/399 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+A+ +++++ L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQAEAVAIVRQLVADYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+GI S G ++ P P AD GGG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGIASYTGRQDSGPLPLGVQLADVGGGSLHAVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R SG GQ +D +M + G+ YL + +P EN + G F
Sbjct: 185 IARQHSGVGQYLDVSMTDCAFSLNAMAGAGYLACGV----------EPAWENQVLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETG-RAKLTEKFKEK 275
YD Y +++GR+++VG+LE F QL LG E P+ E + + L +F+++
Sbjct: 235 YDYYRSREGRWLSVGSLEPAFMQQLCTALGRPELAAMGLSPKPEQQKALKLALQVEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
+ E CE+F DACV PVL+LS+A HP R S +P G A L +
Sbjct: 295 SFDELCELFAGIDACVEPVLNLSEAVEHPQLKARELVSQVPRGDGSSQAQIACPLKFSEC 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVIE 372
A G H+ EVL G+S I++L R VI+
Sbjct: 355 LPAARHIGAAVGAHSDEVLAELGFSAQQIDDLRRAKVIQ 393
>gi|398839692|ref|ZP_10596937.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM102]
gi|398112322|gb|EJM02185.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM102]
Length = 393
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 201/389 (51%), Gaps = 21/389 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L V+K L D++LE FR GVM++L LG + L NPRLIY ++
Sbjct: 65 NKRSLALDLKQPEALEVIKRLLLDYDIVLEQFRPGVMDRLGLGYEALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGLASYTGRADSGPLPLGMQVADVAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R ++G+GQ +D +M + + L + + R E +L+GG+ FYD Y ++DG
Sbjct: 185 IARQQTGQGQHVDVSMTDCAFSLNAMAGAGYLACGVEPDREEQMLNGGS-FYDYYRSRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAK-----LTEKFKEKTQAEWCEIF 284
R+++VG+LE F QL A LG E E R + L +F++ A+ CE+F
Sbjct: 244 RWLSVGSLEPAFMQQLCAALGRPELATQGLSPEPARQQALKEALKVEFEKYDFAQLCELF 303
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
DACV PVLSL +A HP R + +P G A L + G +
Sbjct: 304 AGVDACVEPVLSLGEAVRHPQLKARELVTEVPRGDGTTQAQMACPLKFSAGLPEPRHIGA 363
Query: 343 APGVHTREVLRHFGYSDANIEELIREDVI 371
G HT +VL G+S IEEL R V+
Sbjct: 364 GLGEHTDQVLGELGFSVERIEELRRAKVV 392
>gi|254477280|ref|ZP_05090666.1| alpha-methylacyl-CoA racemase [Ruegeria sp. R11]
gi|214031523|gb|EEB72358.1| alpha-methylacyl-CoA racemase [Ruegeria sp. R11]
Length = 372
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 204/385 (52%), Gaps = 34/385 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----VQDTVGYGKKSLCINL 58
L+GI ++E GL P PF M+L + GA VI + + G +P Q + GK+S+ ++L
Sbjct: 2 LQGIRIIEIEGLGPGPFAAMMLADLGADVICVHRKGKKPDGLAPAQAILDRGKRSIELDL 61
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + + + L +D ++E FR GVME+L LGPD NP LI+ R++G+GQD P S
Sbjct: 62 KDPQDVETLLQLLETADGLIEGFRPGVMERLGLGPDECHARNPGLIFGRMTGWGQDSPLS 121
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNP-TPPC---NLAADFGGGGLMCALGIVMALFER-S 173
AGHD+NY+ +SG L W + P TPP L D GGG L GI+ AL R
Sbjct: 122 QSAGHDMNYIAMSGAL----WHSSLPGTPPMATPTLVGDIGGGALYLVAGILSALLARKD 177
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMA 233
++ G V+D + +GSA++ + L Q + PRGENLLD G H+ Y DG +
Sbjct: 178 RASDGCVVDAAIYDGSAHMMNLLMTLQQAGQFGHPRGENLLD-GPHWSRAYTCADGGHIT 236
Query: 234 VGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTD 288
V LE QFY L + +T++ + + A+L F + + W +F+ +D
Sbjct: 237 VQCLEPQFYQVFLKHMELTDDPDFARQYDKSMWPVLSARLAGIFVTRPRDHWAAMFEGSD 296
Query: 289 ACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR------TPGTSKITEHNP 342
ACV PVLS +A H N RG+++ AG+ A APAPR S+ GT +P
Sbjct: 297 ACVAPVLSPEEARDHQMNT-RGTWVQTSAGLQA-APAPRFSKGISKGGDEGTKWSPPESP 354
Query: 343 APGVHTREVLRHFGYSDANIEELIR 367
G HT E+LR ++E+L R
Sbjct: 355 TRGQHTAEILR-------DLEDLRR 372
>gi|398889258|ref|ZP_10643134.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM55]
gi|398189702|gb|EJM76969.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM55]
Length = 393
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 206/401 (51%), Gaps = 45/401 (11%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF----------VQDTVGY--- 49
L + VL+F+ L P PF ++L + GA V+RI+ V + GY
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHGYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L V+K+L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPEALEVIKSLLQDYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL LSG+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALSGLASYTGRADTGPLPLGMQVADVAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G+GQ +D +M + G+ YL + +P EN + G F
Sbjct: 185 IARQQTGQGQHLDVSMTDCAFSLNAMAGAGYLACGV----------EPGPENQVLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQL--------LAGLGMTEEELPQHEVETGRAKLTEKF 272
YD Y ++DGR+++VG+LE F QL LAGLG++ + Q ++ + L +F
Sbjct: 235 YDYYRSRDGRWLSVGSLEPAFMKQLCTALGLEELAGLGLSPQLAHQQQL---KGALKVEF 291
Query: 273 KEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSF--IPNRAGVVAPAPAPRLSR 330
++ AE +F DACV PVLSL +A SHP R +P G A L
Sbjct: 292 EKHDFAELLALFAELDACVEPVLSLGEALSHPQLQARELVVQVPRGDGSSQAQMACPLKF 351
Query: 331 TPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
+ G + A G HT +VL G+S IEEL R VI
Sbjct: 352 SQGLPEPRHVGSALGQHTDQVLGELGFSVERIEELRRGKVI 392
>gi|374583269|ref|ZP_09656363.1| putative acyl-CoA transferase/carnitine dehydratase
[Desulfosporosinus youngiae DSM 17734]
gi|374419351|gb|EHQ91786.1| putative acyl-CoA transferase/carnitine dehydratase
[Desulfosporosinus youngiae DSM 17734]
Length = 393
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 213/394 (54%), Gaps = 26/394 (6%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRI-DKHGA-----QPFVQDT------VG 48
+ L+G+ VL+ + P P IL +FGA VI+I D+ G +P ++DT V
Sbjct: 3 LPLEGLKVLDLSRYLPGPLATQILGDFGAEVIKIEDRKGELGRYLEPMIKDTSALFYTVN 62
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+S+ ++LKK +G + K L +D++++ FR VM KL LG +VL + NPR+IY +
Sbjct: 63 RNKRSMGLDLKKPEGKEIFKKLVADADIVVDQFRPDVMNKLGLGYEVLKEINPRIIYCII 122
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYG GP AGHD+NYL ++G+ L+G ++ P AD GG + + I++A
Sbjct: 123 TGYGLTGPMRDAAGHDLNYLNIAGVTELMGTKDGPPAMSGVQIADTAGGSMYSVIAILLA 182
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKP-RGENLLDGGAHFYDTYETK 227
L R K+G GQ+ D M++G+ L S+ P RG +L GG Y+ YE K
Sbjct: 183 LAAREKTGEGQLCDVAMMDGALSLLSYTIGEWSGGDGTLPKRGGEMLTGGYAAYNIYECK 242
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKE----KTQAEWCEI 283
DGR +++ A+E +F+A LG+ +E +P H + L + ++ KT+ EW E
Sbjct: 243 DGRHVSLAAVEDKFWASFCRKLGV-DEYIPLHIDIPHQEYLQDSIRKIMLSKTRDEWVEF 301
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRG------SFIPNRAGVVAPAPAPRLSRTPGTSKI 337
F ++D C TPVLSL + HP + R +F + +V +LS TPG +K+
Sbjct: 302 FSDSDLCFTPVLSLDEMVKHPQVLARDMVHTLTNFQGSGKDLVCTGVPIKLSETPGEAKM 361
Query: 338 TEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
G +T E+L GYS A IE+L ++ ++
Sbjct: 362 V--FAGIGENTDEILASIGYSTAQIEQLHKDGIV 393
>gi|339328238|ref|YP_004687930.1| alpha-methylacyl-CoA racemase [Cupriavidus necator N-1]
gi|338170839|gb|AEI81892.1| alpha-methylacyl-CoA racemase [Cupriavidus necator N-1]
Length = 345
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/325 (38%), Positives = 180/325 (55%), Gaps = 17/325 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA-QPFVQDTVGYGKKSLCINLKKA 61
L G+ + EFAGL P PF M+L + GA ++RID+ GA Q D +G G++++ ++LK
Sbjct: 22 LAGVRIAEFAGLGPGPFACMLLADMGADIVRIDRPGARQVHPHDLIGRGRRTVLLDLKHP 81
Query: 62 KGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMA 121
L +D ++E FR GVME+L LGP+ + NPRL+Y R++G+GQ+GP S A
Sbjct: 82 GDRDQALALLAHTDALVEGFRPGVMERLGLGPEAVAAVNPRLVYGRMTGWGQEGPLSQTA 141
Query: 122 GHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVI 181
GHDINY+ LSG L+ +G R+ P PP NL D+GGG L GI+ AL E SGRGQV+
Sbjct: 142 GHDINYIALSGALAAIGERDGAPVPPLNLLGDYGGGSLYLVTGILAALIEARTSGRGQVV 201
Query: 182 DCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
D + +G+ L S L+ + RG+N+LDGGA +Y Y DG ++ +GA+E QF
Sbjct: 202 DAAICDGALSLMSLSQSQSLRGLYTEHRGDNMLDGGAPYYAVYRAADGEYICIGAIEPQF 261
Query: 242 YAQLLAGLGMTEE-ELPQHEVETG---RAKLTEKFKEKTQAEWCE-----------IFDN 286
+A L +G+ QH+ RA+LT F C D+
Sbjct: 262 FALLCERIGLNPALRDAQHDRSRWPALRAELTRIFAADPVCLDCNEDRPLSHYSRPATDS 321
Query: 287 TDACVTPVLSLSQATSHPHNVHRGS 311
+DA S S+ PH V +G+
Sbjct: 322 SDARAEDARS-SRWQPRPHFVRQGT 345
>gi|126728408|ref|ZP_01744224.1| CAIB/BAIF family protein [Sagittula stellata E-37]
gi|126711373|gb|EBA10423.1| CAIB/BAIF family protein [Sagittula stellata E-37]
Length = 358
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/362 (37%), Positives = 202/362 (55%), Gaps = 26/362 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRI-----DKHGAQPFVQDTVGYGKKSLCIN 57
L G+ +LEF L PAPF M L + GA V + D QP ++ + GK+S+ ++
Sbjct: 2 LNGLRILEFEALGPAPFAAMHLADLGAEVTVVHRATHDNPSKQP--RNLLDRGKRSIVLD 59
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK+A ++V K L +SD ++E R GVME+L LGP+V+ NP L+Y R++G+GQDGP
Sbjct: 60 LKEAADIAVAKALVQRSDALIEGMRPGVMERLGLGPEVVHALNPALVYGRMTGWGQDGPR 119
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
+ +GHD+NY GLSG+L G P P L D GGG L +GI+ + +G+
Sbjct: 120 ALRSGHDLNYAGLSGMLFYGGLPGEIPGVPPTLLGDIGGGALYLTVGILSGVLNARTTGK 179
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
G V+D +V+G++++ S L F + RG++LLD G H+ Y DG +AV L
Sbjct: 180 GCVVDAAIVDGTSHMLSLLLSMGPMFSREA-RGQSLLD-GPHWSRCYVCADGGHVAVQCL 237
Query: 238 ESQFYAQLLAGLGMTEE-------ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
E +FYA+ L +G+ ++ + Q V+T A+L F +++ W +F+ +DAC
Sbjct: 238 EPKFYAEFLEVMGLRDDPGLADQFDPKQWPVQT--ARLAGLFAARSRDTWTALFEGSDAC 295
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
V PVLS ++A PH RG + R GV PAPAPR G ++ T G H E
Sbjct: 296 VAPVLSPAEAQEDPHIAARGIW---REGV--PAPAPRFD---GATRPTGDIALRGAHGAE 347
Query: 351 VL 352
+L
Sbjct: 348 IL 349
>gi|398879140|ref|ZP_10634242.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM67]
gi|398197501|gb|EJM84480.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM67]
Length = 393
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 205/392 (52%), Gaps = 27/392 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L+V+K L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPEALAVIKQLVQDYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGLASYTGRADNGPLPLGVQVADVAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R +SG GQ +D +M + + L + + R + +L+GG+ FYD Y ++DG
Sbjct: 185 IARQQSGLGQHLDVSMTDCAFSLNAMAGAGYLACGEEPGREDQMLNGGS-FYDYYRSRDG 243
Query: 230 RFMAVGALESQFYAQL--------LAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWC 281
R+++VG+LE F QL LA LG++ + Q +++ L +F++ AE C
Sbjct: 244 RWLSVGSLEPPFMKQLCTALGLEELAALGLSPQPAQQKKLKDA---LQTEFEKHDFAELC 300
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITE 339
+F DACV PVL+L +A HP R + +P G A L + G +
Sbjct: 301 ALFAELDACVEPVLTLGEAIRHPQLQARELVTDVPRGDGTSQAQMACPLKFSDGLPEHRH 360
Query: 340 HNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
A G HT +VL G+S IEEL R VI
Sbjct: 361 IGAALGEHTDQVLGELGFSSLRIEELRRAKVI 392
>gi|419956124|ref|ZP_14472237.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
stutzeri TS44]
gi|387967087|gb|EIK51399.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
stutzeri TS44]
Length = 391
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 201/398 (50%), Gaps = 53/398 (13%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ V+ +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRIESPSRPDLVRLLPPHDQGVAASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + + ++K L D++LE FR GVMEKL +G + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPQAVELVKRLVQDYDIVLEQFRPGVMEKLGVGYEALRAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY + AGHDINYL L+G+ S G R+ P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRNRAGHDINYLALAGLSSHTGRRDSGPLPLGMQVADIAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
+R +G+GQ +D +M + G+ YL + + +P EN G F
Sbjct: 185 VQRQATGQGQQVDISMTDCAFSLHAMAGAGYLAAGV----------EPGWENQPLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEE----LPQHEVETGRAKLTEKFKEKT 276
YD Y ++DGR+ AVG+LE QF QL +G E +PQ + R +L F+ +
Sbjct: 235 YDYYRSRDGRWFAVGSLEPQFMEQLCRVVGRPELAAQGLMPQAQQALKR-ELAATFESRD 293
Query: 277 QAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGT 334
A+WCE F DACV PVLSL++A HP RG S +P AP ++
Sbjct: 294 FADWCERFAQVDACVEPVLSLAEALQHPQIQARGLVSEVPREG-------APAQAQIGCP 346
Query: 335 SKITEHNPAP-------GVHTREVLRHFGYSDANIEEL 365
K + AP G H +VL GY A I L
Sbjct: 347 IKFSSGLDAPRHIGARLGEHASQVLSELGYDPAQIAAL 384
>gi|372487793|ref|YP_005027358.1| putative acyl-CoA transferase/carnitine dehydratase [Dechlorosoma
suillum PS]
gi|359354346|gb|AEV25517.1| putative acyl-CoA transferase/carnitine dehydratase [Dechlorosoma
suillum PS]
Length = 388
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 197/381 (51%), Gaps = 22/381 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYG------------ 50
L+G+ +L+ L P P + L + GA VI+I+ HGA + + T+G G
Sbjct: 6 LQGVRILDLTRLLPGPVATLHLADLGADVIKIEDHGAGDYAR-TMGDGPEGVSVFYRAVN 64
Query: 51 --KKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+ L ++LK +G ++ + LA ++DV++E FR GVM+KL +G + LC NPRL++ +
Sbjct: 65 RNKRGLRLDLKNPEGAALFRRLAAEADVVIESFRPGVMDKLGVGYEALCSLNPRLVFCAI 124
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ GP + AGHD+NY+G +GIL +G P P D GG + +GI+ A
Sbjct: 125 TGYGQSGPLALAAGHDLNYIGYAGILDQIGVDGGQPAIPNLQIGDLLGGAMSAVMGILAA 184
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
LF+ +SG+G+ +D +M + + + RG ++L GG Y Y T D
Sbjct: 185 LFDARRSGQGRFVDVSMSDAALAHNLFPLFALQGGAGVAERGRDMLSGGDAGYGVYATAD 244
Query: 229 GRFMAVGALESQFYAQLLAGLGMTEEELPQ----HEVETGRAKLTEKFKEKTQAEWCEIF 284
GR+MAV LE +F+ LG + E RA+L F + Q+ W E F
Sbjct: 245 GRYMAVAPLERKFWDLFCDTLGQPRWKARHGATGAEARAMRAELETLFASQPQSYWTEKF 304
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP 344
D CVTPVL++++A +HPH RG G+ P RLS P + PAP
Sbjct: 305 ARVDCCVTPVLTVAEALAHPHFQARGMGF-QADGITQYGPPVRLSDMP--VEPVRPAPAP 361
Query: 345 GVHTREVLRHFGYSDANIEEL 365
G H + +L FG + ++ L
Sbjct: 362 GEHGQAILAEFGVTAEELQRL 382
>gi|222109350|ref|YP_002551614.1| l-carnitine dehydratase/bile acid-inducible protein f [Acidovorax
ebreus TPSY]
gi|221728794|gb|ACM31614.1| L-carnitine dehydratase/bile acid-inducible protein F [Acidovorax
ebreus TPSY]
Length = 370
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 193/369 (52%), Gaps = 18/369 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG----YGKKSLCINL 58
L + VLE GL P PFC M L + GA VI + + ++T G GK+S+ +L
Sbjct: 4 LDSVRVLEIGGLGPGPFCAMHLADLGADVISVVRETKG---RETTGALLNRGKRSVFADL 60
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G ++ L ++D ++E R GVME+L LGP+ NPRL+Y R++G+GQ GP +
Sbjct: 61 KTEEGRQLVLALVAEADALIEGMRPGVMERLGLGPEECMAVNPRLVYGRMTGWGQSGPLA 120
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD NY +SG L P P + D GGG + G++ + + +GRG
Sbjct: 121 PRAGHDTNYAAVSGALWGCSPVGARPVSPFAVLGDIGGGAMYLMTGLLSGIVQARATGRG 180
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D +V+GSA++ + + + + L RG+++ D A FYDTY DG ++ VGA+E
Sbjct: 181 TVVDAAIVDGSAHMLNLMLSARQSGLVADVRGQSIHD-SAPFYDTYVCADGHYVTVGAIE 239
Query: 239 SQFYAQLLAGLGMTEE------ELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNTDACVT 292
QFY LL LG+ E+ + + RA+L F + +A W + + TDAC
Sbjct: 240 PQFYTLLLQVLGLAEDPDFTGSQWDKAAWPVRRARLAALFLAQPRAHWQALLEPTDACFG 299
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
VLS +A HPH R + R GV+ APAPR G + APG HT+ V+
Sbjct: 300 VVLSPVEAAQHPHMRARDVY-SERQGVLQAAPAPRFD---GAAYEPGEACAPGAHTQSVM 355
Query: 353 RHFGYSDAN 361
G S A
Sbjct: 356 EGLGQSGAR 364
>gi|119899729|ref|YP_934942.1| hypothetical protein azo3440 [Azoarcus sp. BH72]
gi|119672142|emb|CAL96056.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 390
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 202/394 (51%), Gaps = 38/394 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYG------------ 50
L G+ VL+ L P P L ++GA VI+++ GA + + T+G G
Sbjct: 10 LAGVRVLDLTRLLPGPLATQHLADYGADVIKVEDTGAGDYAR-TMGPGNAAGSYFHQLVN 68
Query: 51 --KKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+SL ++LK+A+G ++M L +DV++E FR G M +L LG + L NPRL+Y +
Sbjct: 69 RNKRSLRLDLKQAEGRTLMLRLVEHADVLVEGFRPGAMARLGLGYETLAALNPRLVYCSI 128
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
SGYGQ GPY+ AGHDINY+G +G+L +G R P P D GG + A+GI++A
Sbjct: 129 SGYGQQGPYAERAGHDINYIGYAGLLDQIGCRGGAPALPNLQIGDLLGGTMAAAMGILVA 188
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWD--KPRGENLLDGGAHFYDTYET 226
L + +GRG+ +D M + A L + + + RG++LL GG Y YET
Sbjct: 189 LVDARSTGRGRHVDVAMTD--AVLAHAIFPLAEVLARGTVRDRGDDLLTGGVPCYGVYET 246
Query: 227 KDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEV-----ETGRAKLTEKFKEKTQAEWC 281
DGR MAVGALE +F+ L LG + + P H E RA+L F+ +QA W
Sbjct: 247 ADGRHMAVGALEEKFWHLLCDTLGRPDLK-PAHLARDAAGERARAELAAVFRTHSQAHWT 305
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSR----TPGTSKI 337
+F D CVTPVL L +A S V R N G+ AP +S PG +
Sbjct: 306 ALFGTVDCCVTPVLRLEEALSD-EQVRRAVVEAN--GLRQFAPPVAMSEFSLGQPGPA-- 360
Query: 338 TEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
PA G H+ E+L G IE L VI
Sbjct: 361 ----PAQGAHSAEILAELGLDSGEIETLRARGVI 390
>gi|119631220|gb|EAX10815.1| alpha-methylacyl-CoA racemase, isoform CRA_a [Homo sapiens]
Length = 168
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 124/154 (80%)
Query: 88 KLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPP 147
KLQLGP++L + NPRLIYARLSG+GQ G + +AGHDINYL LSG+LS +G NP P
Sbjct: 10 KLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAP 69
Query: 148 CNLAADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDK 207
NL ADF GGGLMCALGI+MALF+R+++G+GQVID NMVEG+AYL S+L +TQ + LW+
Sbjct: 70 LNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKSSLWEA 129
Query: 208 PRGENLLDGGAHFYDTYETKDGRFMAVGALESQF 241
PRG+N+LDGGA FY TY T DG FMAVGA+E Q
Sbjct: 130 PRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQL 163
>gi|330504162|ref|YP_004381031.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina NK-01]
gi|328918448|gb|AEB59279.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina NK-01]
Length = 393
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 201/393 (51%), Gaps = 41/393 (10%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVGY 49
L + +L+F+ L P PF ++L + GA V+R++ G +
Sbjct: 5 LSSLKILDFSTLLPGPFASLLLADMGAEVLRVESPTRMDLVRLLPPHEGGTSTSHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ + + V+K L + D++LE FR GVM+KL +G + L NPRLIY ++
Sbjct: 65 NKRSIALDLKRPEAVEVVKQLVGEYDIVLEQFRPGVMDKLGVGYEALKAVNPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+GI S G ++ P P AD GG L +G++ A+
Sbjct: 125 GYGQSGPYRDRAGHDINYLALAGIASYTGRQDSGPLPLGVQLADLAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
+R SG+GQ +D +M + G+ YLG+ + +P EN G F
Sbjct: 185 VQRQISGQGQQVDVSMTDCAFSLHGMAGAGYLGAGV----------EPGMENQALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKE 274
YD Y T+DGR+ +VG+LE QF Q A +G E + P+ + R ++ +F++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSQKPEDQRALKR-EIEIEFEK 293
Query: 275 KTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIP-NRAGVVAPAP-APRLSRTP 332
+ A+W ++F DACV P+L LS+A HP R + R G+ A A A L +
Sbjct: 294 RDFAQWSQVFAELDACVEPMLPLSEAVQHPQIRSRELVVEVPREGLPAQAQLACPLKFSD 353
Query: 333 GTSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
G A G HT +VL GY I L
Sbjct: 354 GLPPPQHVGAALGAHTEQVLEELGYDAERIAAL 386
>gi|403727069|ref|ZP_10947454.1| alpha-methylacyl-CoA racemase [Gordonia rhizosphera NBRC 16068]
gi|403204125|dbj|GAB91785.1| alpha-methylacyl-CoA racemase [Gordonia rhizosphera NBRC 16068]
Length = 398
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 173/311 (55%), Gaps = 7/311 (2%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ V+EF GL PAPF M+L + GA VI + + G+ + +++L ++L
Sbjct: 24 LSGLRVVEFLGLGPAPFGCMLLADLGAEVITLRRPGSS---VPALVRNRETLEVDLTDED 80
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
+ ++ L +DV++E FR VME+L LGPD + LIYAR++G+GQ GP + AG
Sbjct: 81 ECTKVRGLIAAADVLVEGFRPRVMERLGLGPDDVRTRESGLIYARMTGWGQTGPLAHTAG 140
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HD+NY+ ++G L L P P NL DFGGG + ++ AL ERS++G G V+D
Sbjct: 141 HDLNYIAVTGALHLATRSGSAPLAPANLLGDFGGGAMYLVTSVLAALHERSRTGEGAVLD 200
Query: 183 CNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALESQFY 242
++++G+ YL S + W G N LD GA +YD Y DG F+AVGALE F+
Sbjct: 201 VSILDGTTYLTSMQHEYRARGTWSDVAGTNRLDTGAPYYDVYPCADGHFVAVGALEQPFF 260
Query: 243 AQLLAGLGMTEEELPQHEVETGRAKLTE----KFKEKTQAEWCEIFDNTDACVTPVLSLS 298
LL L + E E + L E + +T+ EW + TDAC+TPVL LS
Sbjct: 261 VVLLEVLELDPELAEGREDPSNWPALREAIGAALRTRTRDEWARCAEGTDACLTPVLDLS 320
Query: 299 QATSHPHNVHR 309
+A +HP HR
Sbjct: 321 EAPAHPQVAHR 331
>gi|398929723|ref|ZP_10664127.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM48]
gi|398166452|gb|EJM54547.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM48]
Length = 393
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 206/401 (51%), Gaps = 45/401 (11%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRLDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L V+ +L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPEALEVISSLLQDYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL LSG+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALSGLASYTGRADSGPLPLGMQVADVAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G+GQ +D +M + G+ YL + +P E+ + G F
Sbjct: 185 IARQQTGQGQHLDISMTDCAFSLNAMAGAGYLACGI----------EPGPESQVLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQL--------LAGLGMTEEELPQHEVETGRAKLTEKF 272
YD Y ++DGR+++VG+LE F QL LAGLG++ + P H+ + A LT +F
Sbjct: 235 YDYYRSRDGRWLSVGSLEPAFMKQLCTALGLEELAGLGLSPQ--PAHQKQLKDA-LTVEF 291
Query: 273 KEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSR 330
++ AE C +F DACV PVL L +A HP R + +P G + A L
Sbjct: 292 EKHDFAELCALFAELDACVEPVLGLGEALCHPQLQARELVADVPRGDGSIQAQMACPLKF 351
Query: 331 TPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
+ G + G HT +VL G+S IEEL R VI
Sbjct: 352 SDGLPEPKHIGATLGQHTDQVLGELGFSAQRIEELRRAKVI 392
>gi|430805567|ref|ZP_19432682.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
gi|429502188|gb|ELA00504.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus
sp. HMR-1]
Length = 352
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 189/347 (54%), Gaps = 30/347 (8%)
Query: 1 MALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF-------VQDTVGYGKKS 53
M L G+ V+EF G+ P P +L + GA VI + + V++ + GK
Sbjct: 10 MPLHGVRVVEFEGIGPGPLAARMLADMGAEVITLTRAEQAAAARRLGGAVENPLRRGKTV 69
Query: 54 LCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQ 113
I+LK +G + +L Q+D ++E FR GVME+L GP NPRL+Y R++G+GQ
Sbjct: 70 EVIDLKSPEGKARALDLIAQADALIEGFRPGVMERLGFGPAECAARNPRLVYGRMTGWGQ 129
Query: 114 DGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERS 173
DGP + AGHD+NY+ L+G+LSL + + P P + D G L A G+ AL +
Sbjct: 130 DGPLAQAAGHDMNYVALTGLLSLSAHKGQAPIVPPTVLGD-AAGALGMAFGVACALVDAR 188
Query: 174 KSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGG-------AHFYDTYET 226
+GRG+V+D +V+ A LG+ + W + G+ +DG + FYD Y
Sbjct: 189 ATGRGRVVDAAIVDIVAMLGTLVH-------WIRANGQ--IDGAQPSPFHDSPFYDVYAC 239
Query: 227 KDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWC 281
DG F+++GA+E FYA LL+ LG+ + E P + +T + ++ + + +A WC
Sbjct: 240 ADGGFISLGAIEPPFYALLLSKLGLADVE-PADQYDTATWPALKERIAALIRSQPRAHWC 298
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
+ + +DAC PVLSL+++ HPHN RG + +G + APAPR
Sbjct: 299 ALLEGSDACFAPVLSLAESVQHPHNAARGIYQITPSGAIEAAPAPRF 345
>gi|86139097|ref|ZP_01057668.1| CAIB/BAIF family protein [Roseobacter sp. MED193]
gi|85824328|gb|EAQ44532.1| CAIB/BAIF family protein [Roseobacter sp. MED193]
Length = 363
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 196/365 (53%), Gaps = 18/365 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA--QPFV--QDTVGYGKKSLCINL 58
L+G ++E GL P PF M L + GA VI + + G P + + + GK+S+ ++L
Sbjct: 2 LQGTRIIEVEGLGPGPFAAMWLADMGADVICVHRKGGGVTPGMPERSVLDRGKRSIELDL 61
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K +G+ L +D ++E FR GVME+L +GPD NP L++ R++G+GQD S
Sbjct: 62 KDPEGIKTFLALVATADGLIEGFRPGVMERLGIGPDECHAVNPDLVFGRMTGWGQDSALS 121
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+NY+ LSG L P P L D GGG + G++ L SG G
Sbjct: 122 KTAGHDLNYISLSGALWYASNPGDAPLTPATLVGDIGGGAMYLVGGMLAGLLRAKTSGEG 181
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D + +GSA++ + L + T + + RG+NLLD G H+ +Y DG +M V LE
Sbjct: 182 CVVDAAIYDGSAHMMNLLMSIRQTGGFGETRGQNLLD-GPHWSRSYACADGGYMTVQCLE 240
Query: 239 SQFYAQLLAGLGMTEEELPQHEVE-------TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+FYAQ LA + ++E+ + + + TGR L F + +A W +F+ +DACV
Sbjct: 241 PKFYAQFLALMELSEDADFKRQFDKSLWPMLTGR--LAGIFASEPRAHWANLFEGSDACV 298
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS +A HP N RG++I GV+ +PAPR P + +P G H+ E+
Sbjct: 299 APVLSPDEAIEHPMN-KRGTWI-EPEGVLQASPAPRFDNAPAWQPLP--SPERGQHSSEI 354
Query: 352 LRHFG 356
L G
Sbjct: 355 LAELG 359
>gi|400755635|ref|YP_006564003.1| alpha-methylacyl-CoA racemase [Phaeobacter gallaeciensis 2.10]
gi|398654788|gb|AFO88758.1| alpha-methylacyl-CoA racemase [Phaeobacter gallaeciensis 2.10]
Length = 366
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 194/364 (53%), Gaps = 21/364 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L+GI V+E GL PAPF M+L + GA VI + + G + + GK+S+ ++LK
Sbjct: 2 LQGIRVIEIEGLGPAPFAAMMLADLGADVICVHRKGDNTGLMPPHPIIDRGKRSITLDLK 61
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + L +DV++E FR GVME+L LGP NP LIY R++G+GQD P +
Sbjct: 62 SDADVETLLQLVESADVLIEGFRPGVMERLGLGPAACHARNPGLIYGRMTGWGQDSPLAQ 121
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER----SKS 175
AGHD+NY LSG L P PP L D GGG L GI+ AL R S
Sbjct: 122 TAGHDLNYTALSGALWYDATPGTPPQPPATLLGDIGGGALYLVAGILAALVRRGNAHESS 181
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G V+D + +GSA++ + L Q + RG +LLD G H+ Y DG ++V
Sbjct: 182 PAGCVVDAAIYDGSAHMMNLLMTLQQAGQFATMRGASLLD-GPHWSRCYLCADGGHISVQ 240
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
LE QFYA+ L+ L + E+ + + G A+LT F + + W ++FD +DAC
Sbjct: 241 CLEPQFYAEFLSRLDLDEDAQFAKQHDKGLWPVLAARLTGIFATQPRDYWADLFDGSDAC 300
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHT 348
V PVLS +A +HP N R ++I G+ A APAPR S G T PAP G HT
Sbjct: 301 VAPVLSPEEAVTHPMNTRR-TWIMADNGLQA-APAPRFS---GQGDWTA-PPAPERGEHT 354
Query: 349 REVL 352
++L
Sbjct: 355 AQIL 358
>gi|254510703|ref|ZP_05122770.1| alpha-methylacyl-CoA racemase [Rhodobacteraceae bacterium KLH11]
gi|221534414|gb|EEE37402.1| alpha-methylacyl-CoA racemase [Rhodobacteraceae bacterium KLH11]
Length = 364
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 196/360 (54%), Gaps = 16/360 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV-----QDTVGYGKKSLCIN 57
L G+ ++E GL P PF M L + GA VI I + G P Q + GK+S+ ++
Sbjct: 2 LNGMRIIEIEGLGPGPFAAMWLADMGADVITIHRKGT-PVTPGMPEQSLLDRGKRSIALD 60
Query: 58 LKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPY 117
LK + L+ K L +D ++E FR GVME L LGP+ K NP+L+Y R++G+GQ P
Sbjct: 61 LKDPEDLANAKRLIATADALIEGFRPGVMENLGLGPETCQKLNPKLVYGRMTGWGQQSPL 120
Query: 118 SSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGR 177
S AGHD+NY+ LSG L ++ P P L D GGG + G++ L +G+
Sbjct: 121 SDTAGHDLNYIALSGALWYASAPDQPPQTPATLVGDIGGGAMYLVAGLLAGLLNAQATGK 180
Query: 178 GQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGAL 237
G ++D + +GSA++ + L + T RG++LLD G H+ Y DG +AV L
Sbjct: 181 GTIVDAAIYDGSAHMMNLLMSLRQTGNLSDTRGQSLLD-GPHWSRIYTCADGGHIAVQCL 239
Query: 238 ESQFYAQLLAGLGMTEE-ELPQHEVETGRAKLTEKFKE----KTQAEWCEIFDNTDACVT 292
E +FYA+ L LG++++ + +T +LTE+F K + +W E+F +DACV
Sbjct: 240 EPKFYARFLDILGLSDDPAFSRQYDKTNWPRLTERFAHLFATKPRDQWMELFYGSDACVA 299
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
PVLS +A HP N R +++ +R G A APR S K + P G HT+E+L
Sbjct: 300 PVLSPQEALDHPMNTERQTWL-DRNGTRQAAAAPRFSTFNWAPKPS---PKRGEHTQEIL 355
>gi|399994126|ref|YP_006574366.1| alpha-methylacyl-CoA racemase [Phaeobacter gallaeciensis DSM 17395
= CIP 105210]
gi|398658681|gb|AFO92647.1| alpha-methylacyl-CoA racemase [Phaeobacter gallaeciensis DSM 17395
= CIP 105210]
Length = 366
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 194/364 (53%), Gaps = 21/364 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV---QDTVGYGKKSLCINLK 59
L+GI V+E GL PAPF M+L + GA VI + + G + + GK+S+ ++LK
Sbjct: 2 LQGIRVIEIEGLGPAPFAAMMLADLGADVICVHRKGDNTGLMPPHPIIDRGKRSITLDLK 61
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+ + L +DV++E FR GVME+L LGP NP LIY R++G+GQD P +
Sbjct: 62 SDADVETLLQLVESADVLIEGFRPGVMERLGLGPAACHARNPGLIYGRMTGWGQDSPLAQ 121
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFER----SKS 175
AGHD+NY LSG L P PP L D GGG L GI+ AL R S
Sbjct: 122 TAGHDLNYTALSGALWYDATPGTPPQPPATLLGDIGGGALYLVAGILAALVRRGNAHDSS 181
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G V+D + +GSA++ + L Q + RG +LLD G H+ Y DG ++V
Sbjct: 182 PAGCVVDAAIYDGSAHMMNLLMTLQQAGQFATMRGASLLD-GPHWSRCYLCADGGHISVQ 240
Query: 236 ALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDAC 290
LE QFYA+ L+ L + E+ + + G A+LT F + + W ++FD +DAC
Sbjct: 241 CLEPQFYAEFLSRLDLGEDAQFAQQHDKGLWPVLAARLTGVFATQPRDYWADLFDGSDAC 300
Query: 291 VTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP--GVHT 348
V PVLS +A +HP N R ++I G+ A APAPR S G T PAP G HT
Sbjct: 301 VAPVLSPEEAVTHPMNTRR-TWIMADNGLQA-APAPRFS---GQGDWTA-PPAPERGEHT 354
Query: 349 REVL 352
++L
Sbjct: 355 AQIL 358
>gi|260431647|ref|ZP_05785618.1| alpha-methylacyl-CoA racemase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415475|gb|EEX08734.1| alpha-methylacyl-CoA racemase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 364
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 196/364 (53%), Gaps = 18/364 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L GI V+E GL P PF M+L + GA VI I + G + + GK+S+ ++L
Sbjct: 2 LDGIRVVEIEGLGPGPFAAMLLADLGADVITIHRKGGAVTQGMPDRSVLDRGKRSIALDL 61
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K L + L ++ ++E FR GVMEKL LGPD + NP L+Y R++G+GQD P +
Sbjct: 62 KNTDDLETARQLIASANALIEGFRPGVMEKLGLGPDTCHRLNPALVYGRMTGWGQDSPLA 121
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
AGHD+NY+ LSG L P P L D GGG L G++ L ++G+G
Sbjct: 122 HTAGHDLNYISLSGALWYASAPGDAPLTPATLVGDIGGGALYLVAGLLAGLLNARETGKG 181
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D + +GSA++ + L + T RG +LLD G H+ +Y DG + V LE
Sbjct: 182 TVVDAAIYDGSAHMMNLLMSLRQTGNLSDKRGHSLLD-GPHWSRSYVCADGDHVTVQCLE 240
Query: 239 SQFYAQLLAGLGMTE--EELPQHEVE-----TGRAKLTEKFKEKTQAEWCEIFDNTDACV 291
+FYA+ LA LG+++ E QH+ + TGR LT F + + W ++F+ +DACV
Sbjct: 241 PKFYAEFLAILGLSKDPEFQSQHDQDLWPRLTGR--LTALFASQPRDYWADLFEGSDACV 298
Query: 292 TPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS +A HP N R ++ + G + APR S T K + P+ G HT+E+
Sbjct: 299 APVLSPDEAARHPMNTSRRAW-QHAHGAFQASAAPRFSTTDWHPKPS---PSRGEHTQEI 354
Query: 352 LRHF 355
L+
Sbjct: 355 LKEL 358
>gi|398986346|ref|ZP_10691505.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM24]
gi|399015501|ref|ZP_10717771.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM16]
gi|398108464|gb|EJL98425.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM16]
gi|398152315|gb|EJM40836.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM24]
Length = 393
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 201/397 (50%), Gaps = 37/397 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVGY 49
L + +L+F+ L P PF ++L + GA V+RI+ G +
Sbjct: 5 LASLKILDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDGGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ L V+K L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPAALEVIKQLLADYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGLSSYTGRADNGPLPLGMQVADVAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R +SG+G +D +M + A+ + + ++P E+ + G FYD Y ++DG
Sbjct: 185 IARQQSGQGTHLDVSMTD-CAFSLNAMAGAGYLACGEEPAWEDQMLNGGSFYDYYRSRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKEKTQAEWCEI 283
R+M+VG+LE F QL LG E P+ + A LT +F++ AE CE+
Sbjct: 244 RWMSVGSLEPGFMQQLCTALGRPELAAQGLSSKPEQQRALKYA-LTVEFEKHDFAELCEL 302
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
F DACV PVLSL +A HP R + +P G A L K ++
Sbjct: 303 FAGIDACVEPVLSLGEAVRHPQLQARELVTQVPRGDGSTQAQMACPL-------KFSQAL 355
Query: 342 PAP-------GVHTREVLRHFGYSDANIEELIREDVI 371
PAP G HT +VL G S + IEEL R VI
Sbjct: 356 PAPRHVGAVLGQHTDQVLAELGLSPSKIEELRRAKVI 392
>gi|158521565|ref|YP_001529435.1| L-carnitine dehydratase/bile acid-inducible protein F
[Desulfococcus oleovorans Hxd3]
gi|158510391|gb|ABW67358.1| L-carnitine dehydratase/bile acid-inducible protein F
[Desulfococcus oleovorans Hxd3]
Length = 382
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 203/381 (53%), Gaps = 15/381 (3%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRID--KHGAQPFVQDTVGYGKKSLCINLK 59
+L GI V++ + L P P+C MIL + GA VI I+ + A +TV K+ + +NLK
Sbjct: 6 SLTGIKVIDLSRLLPGPYCTMILADHGARVIAIEDRRFLADGLFLNTVNRNKEHITLNLK 65
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
+G + +L +DV++E FR GV+EKL + + + NP+++Y +SGYGQ G Y
Sbjct: 66 SEQGKKIFFDLVKDADVVVEGFRPGVVEKLGVDYKTVAEKNPKIVYCSISGYGQTGEYRD 125
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
+GHD+NYL L G+L L+G ++R P P AD GGG+ A+GI++AL R +G+GQ
Sbjct: 126 RSGHDVNYLALCGVLDLIGDKDRPPAIPGVQFADIAGGGMSAAIGILLALVARQTTGKGQ 185
Query: 180 VIDCNMVEGS-AYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
ID +M + A+L + L ++ + R LL FY+TYETKDGR +++GALE
Sbjct: 186 YIDISMTDSMLAFLPTALFMHHAIGVFPE-RANALLSHRYAFYNTYETKDGRHISIGALE 244
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTPV 294
+F+ L A LG+ + +P E R ++ + F+ KT +W D C PV
Sbjct: 245 HRFWKNLCAHLGL-DAFIPLQYDEPRRQEIIDTLRDIFRAKTLDQWKTDLAGVDCCWAPV 303
Query: 295 LSLSQATSHPHNVHRGSFI----PNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTRE 350
S+++ P HR + P+ +LS TPG+ + + G T
Sbjct: 304 QSVAEVLDDPFFAHREMVVDSGDPDARKAKTIGVPVKLSDTPGSVRTVPD--SFGQSTVA 361
Query: 351 VLRHFGYSDANIEELIREDVI 371
VL GY+ IE ++ V+
Sbjct: 362 VLGELGYTKEQIETFFKDGVV 382
>gi|116049120|ref|YP_792078.1| hypothetical protein PA14_49070 [Pseudomonas aeruginosa UCBPP-PA14]
gi|421175759|ref|ZP_15633431.1| hypothetical protein PACI27_3956 [Pseudomonas aeruginosa CI27]
gi|115584341|gb|ABJ10356.1| hypothetical protein PA14_49070 [Pseudomonas aeruginosa UCBPP-PA14]
gi|404531537|gb|EKA41477.1| hypothetical protein PACI27_3956 [Pseudomonas aeruginosa CI27]
Length = 393
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 198/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+R++ G P V T +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHVDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSPKPEEQRALKREIEMEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG + +P G A + + G
Sbjct: 295 DFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPIKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
S A G T VL GYS I EL
Sbjct: 355 LSAPRHIGAALGADTVAVLEGLGYSAERIAEL 386
>gi|408681175|ref|YP_006881002.1| Alpha-methylacyl-CoA racemase [Streptomyces venezuelae ATCC 10712]
gi|328885504|emb|CCA58743.1| Alpha-methylacyl-CoA racemase [Streptomyces venezuelae ATCC 10712]
Length = 362
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 193/366 (52%), Gaps = 23/366 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKH-------GAQPFVQDTVGYGKKSLC 55
L G+ VLEFAG AP F G +L+ GA V+R+D+ GA+P ++ + G++S+
Sbjct: 5 LTGVRVLEFAGSAPTAFVGTVLSGLGADVVRVDRAPGAAPDPGARP-AENPLSRGRRSVA 63
Query: 56 INLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDG 115
++LK G+ LA +D+++E FR GV E+L +GPD NPRL+Y R+SG+GQ G
Sbjct: 64 LDLKTPAGVEQALALAEHADILVEGFRPGVAERLGIGPDAARARNPRLVYGRVSGWGQQG 123
Query: 116 PYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKS 175
++ A HD+ L L+G L PP + F GG + ++ AL ER +S
Sbjct: 124 EWAGRAAHDLAVLALTGALDTDPATGDPVLPPTAYLSSFAGGASVHVQALLAALHERERS 183
Query: 176 GRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVG 235
G GQV+D + +G+A + + + + W + G + + H Y Y DGR +AV
Sbjct: 184 GLGQVVDTALADGAALISTLIHQ------WREVPGNHTVTDAPH-YSLYRAADGRHLAVA 236
Query: 236 ALESQFYAQLLAGLGMTE-EELPQH----EVETGRAKLTEKFKEKTQAEWCEIFDNTDAC 290
A+E + Y LL LG+ + ++LP + RA + ++F + + W ++FD DA
Sbjct: 237 AIEPKLYQNLLEQLGLADTDDLPDRTDPADWPALRALIADRFASRDRDHWAKVFDAVDAG 296
Query: 291 VTPVLSLSQATSHPHNVHRGSFIP-NRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTR 349
V PVL+ ++A H RG+F+ + V PAP R RTP P PG HT
Sbjct: 297 VAPVLTAAEAAGHHQLAARGAFVTVGDSTVPQPAPPSRFDRTPAVPP--SRAPLPGEHTD 354
Query: 350 EVLRHF 355
EVL +
Sbjct: 355 EVLAEW 360
>gi|358639010|dbj|BAL26307.1| acyl-CoA transferase [Azoarcus sp. KH32C]
Length = 388
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 201/388 (51%), Gaps = 24/388 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPF------VQDTVGY------- 49
L+G+ VL+ L P P L ++GA VI+++ GA + ++D Y
Sbjct: 6 LEGLRVLDLTRLLPGPLATQHLADYGAEVIKVEDTGAGDYARTMGAMKDDTSYFYRIVNR 65
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
GKKS+ ++LK+A G + L +DV++E FR GVM+KL LG L ++NP+++ +S
Sbjct: 66 GKKSVRLDLKQAAGRELFLRLVEGADVVVEGFRPGVMDKLGLGYATLAETNPKIVLCSIS 125
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY+ AGHDINY+G +G+L +G P P D GG + G+++A+
Sbjct: 126 GYGQTGPYALHAGHDINYIGYAGVLDQIGAAGGPPVIPNLQIGDLLGGTMSALFGLLVAI 185
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
+ +G+G+ +D +M + + + +PRGE+LL GG Y YET DG
Sbjct: 186 IDARATGQGRHVDVSMTDAALAHAIFPLAEVLAHGRAQPRGEDLLTGGVPCYGVYETADG 245
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG------RAKLTEKFKEKTQAEWCEI 283
R MAVGALE +F++ L L +L + TG +A+L F +TQA+W E
Sbjct: 246 RHMAVGALEEKFWSMLCDAL--ERPDLKPGHLATGEEGARVKAELAAIFASRTQAQWVEH 303
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA 343
FD D CVTP+L L ++ P RG + GV AP R+S S + PA
Sbjct: 304 FDGIDCCVTPILRLEESLHDPQLRARGMVV-EVDGVRQFAPPVRMSDFSPASFTSA--PA 360
Query: 344 PGVHTREVLRHFGYSDANIEELIREDVI 371
G T EVL G A I+ L V+
Sbjct: 361 AGADTNEVLTALGLDTAEIQRLRAAGVV 388
>gi|392985328|ref|YP_006483915.1| hypothetical protein PADK2_19700 [Pseudomonas aeruginosa DK2]
gi|392320833|gb|AFM66213.1| hypothetical protein PADK2_19700 [Pseudomonas aeruginosa DK2]
Length = 393
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 196/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+R++ G P V T +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHVDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTE-----EELPQHEVETGRAKLTEKFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E L E + ++ +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSLKPEEQRALKREIEMEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG + +P G A + + G
Sbjct: 295 DFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPIKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
A G T VL GYS I EL
Sbjct: 355 LPAPRHIGAALGADTVAVLEGLGYSAERIAEL 386
>gi|170737127|ref|YP_001778387.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia MC0-3]
gi|169819315|gb|ACA93897.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
cenocepacia MC0-3]
Length = 350
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 184/346 (53%), Gaps = 31/346 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY--------GKKSL 54
L GI ++EF GL P P G +L GA + I + + D + GK +
Sbjct: 7 LAGIHIVEFEGLGPGPLAGWMLAGMGARITLIARPSGRTSAPDALRARDGDLLREGKTIV 66
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK G +L Q+D ++E R GVME+L LGPD + NP+L+Y R++G+GQD
Sbjct: 67 ELDLKVPAGRDAALDLIAQADALIEGLRPGVMERLGLGPDACARRNPKLVYGRMTGWGQD 126
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP ++ AGHD+NY+ L+G+LSL R+ P P + D GG L A GIV AL +
Sbjct: 127 GPLATAAGHDLNYVALTGLLSLSAPRDGRPGVPPTVVGD-AGGALGLAFGIVCALLDVRG 185
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGG-------AHFYDTYETK 227
G G+V+D +V+ + LGS LW + G+ LDG A FYD Y
Sbjct: 186 GGPGRVVDGAIVDIVSMLGS-------LALWARANGQ--LDGAQPSLFHDAPFYDVYRCA 236
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCE 282
DG + +GALE FYA L+ LG+T+ + P + + +A+ E F ++ A WC
Sbjct: 237 DGECVTIGALEPPFYALLVERLGLTDVD-PASQYDRAHWPALKARFAEVFAQQPSAHWCA 295
Query: 283 IFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
+ + TDAC PVLS++ A +HPHN RG + + G V APR
Sbjct: 296 LLEGTDACFAPVLSVADAAAHPHNAARGIYRTDEHGNVRARVAPRF 341
>gi|407363222|ref|ZP_11109754.1| alpha-methylacyl-CoA racemase [Pseudomonas mandelii JR-1]
Length = 393
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 200/390 (51%), Gaps = 23/390 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--------------HGAQPFVQDTVG 48
L + VL+F+ L P PF ++L + GA V+RI+ HG +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAQVLRIESPTRMDLLRVLPPHDHGVSA-SHAYLN 63
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+SL ++LK+ + L V+K L D++LE FR GVME+L LG + L NPRLIY +
Sbjct: 64 RNKRSLALDLKQPEALEVIKQLLADHDIVLEQFRPGVMERLGLGYEALKAINPRLIYVSI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ GPY AGHDINYL L+G+ S G P P AD GG L +G++ A
Sbjct: 124 TGYGQSGPYKDRAGHDINYLALAGLASYTGRTESGPLPLGMQVADVAGGSLHGVIGLLAA 183
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+ R SG GQ +D +M + + L + + R + +L+GG+ FYD Y ++D
Sbjct: 184 VIARQHSGVGQHLDVSMTDCAFSLNAMAGAGYLACGVEPGREDQMLNGGS-FYDYYRSRD 242
Query: 229 GRFMAVGALESQFYAQLLAGLGMTEEEL----PQ-HEVETGRAKLTEKFKEKTQAEWCEI 283
GR+++VG+LE F QL + LG E P+ E + + +L +F++ A+ CE+
Sbjct: 243 GRWLSVGSLEPAFMQQLCSALGRPELAAKGLSPKPAEQQVLKNELKAEFEKHDFAQLCEL 302
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
F DACV PVL+L++A HP R + +P G A L + G +
Sbjct: 303 FAGVDACVEPVLNLAEAVQHPQLQARKLVTQVPRGDGSAQAQMACPLKFSEGLPEPRHIG 362
Query: 342 PAPGVHTREVLRHFGYSDANIEELIREDVI 371
G HT +VL G S I EL R VI
Sbjct: 363 AVLGQHTDQVLGELGMSAERIAELRRAKVI 392
>gi|330811224|ref|YP_004355686.1| CoA-transferase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423698780|ref|ZP_17673270.1| CoA-transferase, family III [Pseudomonas fluorescens Q8r1-96]
gi|327379332|gb|AEA70682.1| Putative CoA-transferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387996589|gb|EIK57919.1| CoA-transferase, family III [Pseudomonas fluorescens Q8r1-96]
Length = 393
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 206/401 (51%), Gaps = 45/401 (11%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ Q ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRQDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L+V+ L D++LE FR GVME+L LG + L NPRLIY ++
Sbjct: 65 NKRSLALDLKQPEALAVVTQLLKDYDILLEQFRPGVMERLGLGYEALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S +G + P P AAD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGLASHIGRADSGPLPLGIQAADIAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G+GQ +D +M + G+ YL + W+K +L+GG+ F
Sbjct: 185 IARQQTGQGQHLDVSMTDCVFSLNAMAGAGYLACGVEPG-----WEK----QMLNGGS-F 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQL--------LAGLGMTEEELPQHEVETGRAKLTEKF 272
YD Y T+DGR+M+VG+LE F L LA G++ + QH + + L +F
Sbjct: 235 YDYYRTRDGRWMSVGSLEPVFMQALCEALGRPELAAQGLSPKPEQQHAL---KQALQAEF 291
Query: 273 KEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSR 330
++ AE C +F DACV PVLSL +A HP R + +P G A L
Sbjct: 292 EKHDFAELCSLFAGIDACVEPVLSLEEAVRHPQLQARELVTQVPRGDGSSQAQMACPLRF 351
Query: 331 TPGTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
+ G + G HT +VL G+S IE L + V+
Sbjct: 352 SEGLPEPRHIGAELGAHTDQVLGELGFSAQRIEALRKRGVV 392
>gi|111024935|ref|YP_707355.1| fatty acid-CoA racemase [Rhodococcus jostii RHA1]
gi|40787247|gb|AAR90164.1| putative fatty acid-CoA racemase [Rhodococcus sp. DK17]
gi|110823914|gb|ABG99197.1| probable fatty acid-CoA racemase [Rhodococcus jostii RHA1]
Length = 378
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 136/364 (37%), Positives = 194/364 (53%), Gaps = 29/364 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYGKKSLCINLKKAK 62
L G+ VL+ LAP P+ M+L + GA VI I G + GK+ + ++LK
Sbjct: 8 LAGVRVLDMTRLAPGPYASMLLADLGADVIAI-GGGRSGLPVPALSRGKEFISLDLKTED 66
Query: 63 GLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSSMAG 122
G ++ L +++DV +E FR GV ++L G L NP L+Y ++GYGQ GP + AG
Sbjct: 67 GRQALRTLVSEADVFMEGFRPGVADRLGAGYAELSALNPGLVYCSVTGYGQGGPMAQRAG 126
Query: 123 HDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQVID 182
HDINYL + G L + G ++ P PP NL ADF GGGL+ A GI+ AL++R+++G+G+ ID
Sbjct: 127 HDINYLAIGGALGVFGPSDQPPVPPLNLVADFAGGGLLSAFGILGALYDRTRTGKGRYID 186
Query: 183 CNMVEGSAYLGSWLTRTQDTFL-WDKP----RGENLLDGGAHFYDTYETKDGRFMAVGAL 237
MV+G L+ F+ W P RG +L G FY Y DGR++AVGAL
Sbjct: 187 SAMVDGV------LSMMGMNFVDWQTPTLPGRGRGVLVGSMPFYRCYRCSDGRYVAVGAL 240
Query: 238 ESQFYAQLLAGLGMTEEELPQHEVETG----RAKLTEKFKEKTQAEWCEIFDNTDACVTP 293
E F+ +L L + +P H E+ LT +F++KT EW +F + DACVTP
Sbjct: 241 EVAFFERLWTTLNLG--AVPNHFDESTWDLIEKSLTAEFEKKTMVEWTAVFADVDACVTP 298
Query: 294 VLSLSQATSHPHNVHRG-SFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
VL + ++ V R F + VV P S P +IT+ + T EVL
Sbjct: 299 VLEPHELSTFDQIVARDPGFALDSVPVV-----PVFSGGP-KRRITDTR----IKTEEVL 348
Query: 353 RHFG 356
R G
Sbjct: 349 RRAG 352
>gi|310826924|ref|YP_003959281.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308738658|gb|ADO36318.1| hypothetical protein ELI_1332 [Eubacterium limosum KIST612]
Length = 399
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 208/393 (52%), Gaps = 36/393 (9%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT-------- 46
AL+G+ +L+F+ L P PF +L + GA V++I G PF++ T
Sbjct: 11 ALEGLKILDFSTLLPGPFATTMLADLGAEVLKISGPGKPDIVLDYPPFIEGTDVSANQAW 70
Query: 47 VGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYA 106
+G KK++ +NLKK + + ++K L + D+++E FR GVMEKL LG + L + NPRLIY
Sbjct: 71 LGRNKKTMLLNLKKPEAVDIVKKLIMEYDIVMEQFRPGVMEKLGLGYEALAEINPRLIYC 130
Query: 107 RLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIV 166
L+GYGQ GP S AGHDINYL SG ++ G P AD G + +GI+
Sbjct: 131 SLTGYGQTGPLSHRAGHDINYLARSGNMAQAGRTETGPVLTNMQVADVAVGSMNSVIGIL 190
Query: 167 MALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWD----KPRGENLLDGGAHFYD 222
A+ R+++G+GQ +D M++G L + FL D K GE L G YD
Sbjct: 191 AAVQYRNRTGKGQRVDIAMLDG---LIPFNGMDGTAFLADGKVPKREGERL--NGGCMYD 245
Query: 223 TYETKDGRFMAVGALESQFYAQLLAGLG---MTEEELPQHEVETGRAKLTEKFKEKTQAE 279
YETKDG+++++GALE +F+A+ +G + E + +V+ + + KEKT+ E
Sbjct: 246 FYETKDGQYLSLGALEPKFWAEFCHCIGREDLIEGSVWPEDVKAVKEVIRGILKEKTRDE 305
Query: 280 WCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI-----PNRAG--VVAPAPAPRLSRTP 332
W +FD D CV PVLS+ +A ++ + P G V A +LS +P
Sbjct: 306 WMAVFDGLDVCVEPVLSVQEALWEDAHIREREMVVEVELPLSDGKKVTQYGTAVKLSESP 365
Query: 333 GTSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
+ + G HT+EVL+ G SD IE L
Sbjct: 366 AQYRYGGY--PVGYHTKEVLKAMGCSDDEIESL 396
>gi|451985781|ref|ZP_21933988.1| Alpha-methylacyl-CoA racemase [Pseudomonas aeruginosa 18A]
gi|451756579|emb|CCQ86511.1| Alpha-methylacyl-CoA racemase [Pseudomonas aeruginosa 18A]
Length = 393
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 198/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+R++ G P V T +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHVDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE+QF Q A +G E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLETQFMQQFCAAIGRPELAARGLSPKPEEQRALKREIEMEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG + +P G A + + G
Sbjct: 295 DFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPIKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
A G T VL GYS I EL
Sbjct: 355 LPAPRHIGAALGADTVAVLEGLGYSAERIAEL 386
>gi|313106163|ref|ZP_07792416.1| hypothetical protein PA39016_000210015 [Pseudomonas aeruginosa
39016]
gi|386065002|ref|YP_005980306.1| hypothetical protein NCGM2_2062 [Pseudomonas aeruginosa NCGM2.S1]
gi|310878918|gb|EFQ37512.1| hypothetical protein PA39016_000210015 [Pseudomonas aeruginosa
39016]
gi|348033561|dbj|BAK88921.1| hypothetical protein NCGM2_2062 [Pseudomonas aeruginosa NCGM2.S1]
Length = 393
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 197/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+R++ G P V T +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHVDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSPKPEEQRALKREIEMEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG + +P G A L + G
Sbjct: 295 DFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPLKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
A G T VL GYS I EL
Sbjct: 355 LPAPRHIGAALGADTVAVLEGLGYSAERIAEL 386
>gi|398884192|ref|ZP_10639133.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM60]
gi|398195261|gb|EJM82311.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM60]
Length = 393
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 200/389 (51%), Gaps = 21/389 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L+V+K L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPEALAVIKQLVQDYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGLASYTGRADNGPLPLGVQVADVAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R +SG GQ +D +M + + L + + R + +L+GG+ FYD Y ++DG
Sbjct: 185 IARQQSGLGQHLDVSMTDCAFSLNAMAGAGYLACGEEPGREDQMLNGGS-FYDYYRSRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEE---LPQHEVETGRAK--LTEKFKEKTQAEWCEIF 284
R+++VG+LE F QL LG+ E L + R K L +F++ AE C +F
Sbjct: 244 RWLSVGSLEPPFMKQLCTALGLEELATLGLSPQPAQQKRLKDALQTEFEKHDFAELCALF 303
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
DACV PVL+L +A HP R + +P G A L + G +
Sbjct: 304 AELDACVEPVLTLGEAIRHPQLQARELVTDVPRGDGTSQAQMACPLKFSDGLPEPRHIGA 363
Query: 343 APGVHTREVLRHFGYSDANIEELIREDVI 371
A G HT +VL G+ I EL R VI
Sbjct: 364 ALGEHTDQVLGELGFGAERIAELRRAKVI 392
>gi|346995489|ref|ZP_08863561.1| CAIB/BAIF family protein [Ruegeria sp. TW15]
Length = 364
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 196/359 (54%), Gaps = 14/359 (3%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGA--QPFV--QDTVGYGKKSLCINL 58
L GI ++E GL P PF M+L + GA VI I + G+ P + + + GK+S+ ++L
Sbjct: 2 LNGIRIIEVEGLGPGPFAAMLLADMGADVITIHRKGSAITPGMPERSLLDRGKRSIALDL 61
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K + L K L +D ++E FR VMEKL LGP+ + NP+L+Y R++G+GQ P S
Sbjct: 62 KDPQELGTAKRLIATADALIEGFRPSVMEKLGLGPEDCHQINPKLVYGRMTGWGQQSPLS 121
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+ AGHD+NY+ LSG LS + P P L D GGG L G++ L +G+G
Sbjct: 122 NTAGHDLNYIALSGALSYASPPGQPPLTPATLVGDIGGGALYLIAGLLAGLLNAQSTGKG 181
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D + +GSA++ + L + T RGE+LLD G H+ TY DG F++V LE
Sbjct: 182 TVVDAAIYDGSAHMMNLLMSLRQTGNLSYTRGESLLD-GPHWSRTYTCADGGFISVQCLE 240
Query: 239 SQFYAQLLAGLGMTEE-ELPQHEVETGRAKLTEK----FKEKTQAEWCEIFDNTDACVTP 293
+FY L LG+ ++ E + + LTE+ F +K + EW +F +TDACV P
Sbjct: 241 PKFYGCFLDILGLGDDAEFARQYDQAAWPGLTERLSKIFAQKPRDEWAALFQDTDACVAP 300
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
VLS +A HP N R ++I + A A APR S + +P G HT E+L
Sbjct: 301 VLSPQEALDHPMNTARQTWIDHDETRQA-AAAPRFSTYDWHPR---SSPKRGEHTDEIL 355
>gi|13472120|ref|NP_103687.1| fatty acid Co-A racemase [Mesorhizobium loti MAFF303099]
gi|14022865|dbj|BAB49473.1| probable fatty acid Co-A racemase [Mesorhizobium loti MAFF303099]
Length = 389
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 193/359 (53%), Gaps = 16/359 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRID-KHGAQPFV--QDTVGYGKKSLCINLK 59
LKG ++E L PAPF GM+L + GA VI + K P + + + GK+S+ ++L+
Sbjct: 6 LKGTRIIEIEALGPAPFAGMLLADLGADVIVVHRKQAPMPGLPERSLLDRGKRSIALDLR 65
Query: 60 KAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYSS 119
A ++V+ +L +D ++E FR GVME+L LGPD +P+L+Y R++G+GQ GP +
Sbjct: 66 DAGDVAVLMHLIATADGLIEGFRPGVMERLGLGPDACLAVSPKLVYGRMTGWGQHGPLAR 125
Query: 120 MAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRGQ 179
AGHD+NY G+SG L P P L D GGG L +G++ + G G
Sbjct: 126 TAGHDMNYTGVSGALWYASLPGEPPMAPPTLTGDIGGGALYLVIGMLAGIMNARAGGPGT 185
Query: 180 VIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALES 239
V+D +V+GSA++ + L + RG++LLD G H+ Y + DG F++V +E
Sbjct: 186 VVDAAIVDGSAHMMNLLMVLGQSGGLVAERGQSLLD-GPHWCRVYRSADGGFISVQCIEP 244
Query: 240 QFYAQLLAGLGMTEEELPQHEVETGR-------AKLTEKFKEKTQAEWCEIFDNTDACVT 292
+FY L LG+ + P+ + R ++L F K + EW +F+ +DACV+
Sbjct: 245 KFYTLFLDRLGLAAD--PRFAKQFDRDLWPELGSRLAAIFAAKPRDEWTSLFEGSDACVS 302
Query: 293 PVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREV 351
PVLS +A HPH RGS++ GV+ A APR S K PA H E+
Sbjct: 303 PVLSPWEAAQHPHMAARGSWL-AVDGVLQAAAAPRFSGW--AQKTPAKGPARDEHGAEI 358
>gi|83647321|ref|YP_435756.1| acyl-CoA transferase/carnitine dehydratase [Hahella chejuensis KCTC
2396]
gi|83635364|gb|ABC31331.1| predicted acyl-CoA transferase/carnitine dehydratase [Hahella
chejuensis KCTC 2396]
Length = 400
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 207/396 (52%), Gaps = 41/396 (10%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------HGAQPFVQDT------VGY 49
L + +L+F+ L P P M+L + GA V+RI+ P V + +
Sbjct: 5 LSSLKILDFSTLLPGPCATMMLADMGAQVLRIESPTRTDLLRVVPPMVGEVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
GK+SL ++LK+ + + ++K L + D+++E FR GVM++L L + L NPR+IY ++
Sbjct: 65 GKRSLTLDLKQPQAVDIVKKLILEYDILVEQFRPGVMQRLGLDYETLRAINPRVIYCSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY GHDINYL L+G+ S G P+P AAD GG +GI+ A+
Sbjct: 125 GYGQSGPYRDRPGHDINYLALAGVSSYSGRAESGPSPFGVQAADVAGGSHHAVMGILAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGS-----AYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTY 224
+R +G G+ ID +M + + + +L +D P+ E + G YD Y
Sbjct: 185 VQRQLNGEGRRIDISMSDAALAMNHMAMAGYLATGED------PQLEKEILNGGGCYDYY 238
Query: 225 ETKDGRFMAVGALESQFYAQLLAGLG---MTEEELPQHEV--ETGRAKLTEKFKEKTQAE 279
T+DGR+++VGALE QF L L M L E+ + + KLTE F KT AE
Sbjct: 239 RTQDGRYLSVGALEPQFAEALCRALDVPHMLPLMLSPRELDRQASKQKLTEIFLGKTLAE 298
Query: 280 WCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIP-------NRAGVVAPAPAPRLSRTP 332
W ++F + DACV PVLSLS+A +HPH R F +R + +P + P
Sbjct: 299 WRQVFASVDACVEPVLSLSEAENHPHFKARDMFCQVSDDDGVSRKQLASPIKFEGDAFVP 358
Query: 333 GTSKITEHNPAPGVHTREVLRHFGYSDANIEELIRE 368
G + A G H++EVL G++DA I+ L+ +
Sbjct: 359 GRA-----GAALGQHSQEVLTELGFNDAEIDALMEQ 389
>gi|257092519|ref|YP_003166160.1| L-carnitine dehydratase/bile acid-inducible protein F [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257045043|gb|ACV34231.1| L-carnitine dehydratase/bile acid-inducible protein F [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 387
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 193/387 (49%), Gaps = 23/387 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDT------------VGYG 50
L G+ VL+ L P P M L + GA VI+++ GA + + V
Sbjct: 6 LAGLRVLDLTRLLPGPLASMHLADLGADVIKVEDTGAGDYARSAGAVHGDISYFQLVNRN 65
Query: 51 KKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSG 110
K+SLC++LK+ G+ LA +DVILE FR GV++KL +G + + NPR++Y ++G
Sbjct: 66 KRSLCLDLKQGAGVDAFLRLAATADVILEGFRPGVVDKLGIGYQAVAELNPRIVYGAITG 125
Query: 111 YGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALF 170
YGQDGPY AGHD+NYLG G+L +G P P D GG L +G++ +
Sbjct: 126 YGQDGPYRDRAGHDLNYLGYCGLLDQIGLPGSAPAVPNFQIGDLLGGSLTALVGVLAGVV 185
Query: 171 ERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGR 230
+ SGRG+ +D +M + + PRGE++L GG Y Y T DGR
Sbjct: 186 DARSSGRGRYVDVSMTDAVFAHTIFPLLAVLGLGHALPRGEDVLSGGMPSYGVYATSDGR 245
Query: 231 FMAVGALESQFYAQLLAGLGMTEEELPQHEVETG------RAKLTEKFKEKTQAEWCEIF 284
AV A+E +F+ +G +L TG R +L F +++ A+W +F
Sbjct: 246 HFAVSAMEPKFWQGFCEAVG--RPDLKPFAFATGAEGQRIRRELEAAFAQRSFADWTAVF 303
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAP 344
+ D CVTPVL L ++ + RG I AGV AP ++S P ++ PA
Sbjct: 304 ERVDCCVTPVLRLEESLENEQLQARG-MIVEVAGVKQFAPPFKISEVPFAVRLPP--PAA 360
Query: 345 GVHTREVLRHFGYSDANIEELIREDVI 371
G H+ EVLR G+S I L + VI
Sbjct: 361 GEHSDEVLREAGFSADEIARLRAQKVI 387
>gi|443471944|ref|ZP_21061981.1| Alpha-methylacyl-CoA racemase [Pseudomonas pseudoalcaligenes KF707]
gi|442902169|gb|ELS27810.1| Alpha-methylacyl-CoA racemase [Pseudomonas pseudoalcaligenes KF707]
Length = 393
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 195/398 (48%), Gaps = 39/398 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVGY 49
L + +L+F+ L P PF ++L + GA V+R++ G Q +
Sbjct: 5 LSSLKILDFSTLLPGPFASLLLADMGAEVLRVESPTRMDLVRLLPPHDGGQSTSHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ + + ++ L + D++LE FR GVME+L LG + L NPRLIY ++
Sbjct: 65 NKRSIALDLKRPEAVEIVGRLVKEYDIVLEQFRPGVMERLGLGYEALKAINPRLIYLSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL LSGI S G R+ P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRDRAGHDINYLALSGIASYTGRRDSGPLPLGVQLADIAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R +G GQ +D +M + G+ YLG+ + +P EN G F
Sbjct: 185 IHRQATGEGQQVDVSMTDCAFALHGMAGAGYLGAGV----------EPDMENQALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF A + E P E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMEPFCAAICRPELAAKGLSPNAEDQRALKRAIEIEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSF--IPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG +P A + + G
Sbjct: 295 DFAEWQALFAGLDACVEPMLPLSEAVEHPQIRARGLVQEVPREGQAPQRQIACPIKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
A G HT EVLR G +A I L V+
Sbjct: 355 LPPPRHAGGALGSHTMEVLRELGLDEAAIAALKSARVV 392
>gi|398862938|ref|ZP_10618520.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
gi|398249548|gb|EJN34933.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
Length = 393
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 202/390 (51%), Gaps = 23/390 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L V++ L D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPEALEVIRQLLQDHDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGLSSYSGRADSGPLPLGMQVADIAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R ++G+GQ +D +M + + L + + R + +L+GG+ FYD Y ++DG
Sbjct: 185 IARQQTGQGQHLDVSMTDCAFSLNAMAGAGYLACGVEPGREDQMLNGGS-FYDYYRSRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKEKTQAEWCEI 283
R+++VG+LE F QL A LG+ E P + + A TE F++ AE C +
Sbjct: 244 RWLSVGSLEPGFMKQLCAALGLEEWASLGLSTQPAQQRKLKDALKTE-FEKHDFAELCAL 302
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
F DACV PVLSL +A HP R + +P G A L + G +
Sbjct: 303 FAELDACVEPVLSLGEAVRHPQLQARELVTQVPRGDGSSQAQMACPLKFSGGLPQPRHIG 362
Query: 342 PAPGVHTREVLRHFGYSDANIEELIREDVI 371
A G HT +VL G+S + EL R V+
Sbjct: 363 AALGQHTDQVLGELGFSVERVAELRRAKVV 392
>gi|49089446|gb|AAT51684.1| PA1188, partial [synthetic construct]
Length = 394
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 197/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+R++ G P V T +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHVDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSPKPEEQRALKREIEMEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG + +P G A + + G
Sbjct: 295 DFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPIKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
A G T VL GYS I EL
Sbjct: 355 LPAPRHIGAALGADTVAVLEGLGYSAERIAEL 386
>gi|421162101|ref|ZP_15620990.1| hypothetical protein PABE173_4552 [Pseudomonas aeruginosa ATCC
25324]
gi|421169327|ref|ZP_15627348.1| hypothetical protein PABE177_4123 [Pseudomonas aeruginosa ATCC
700888]
gi|404526611|gb|EKA36814.1| hypothetical protein PABE177_4123 [Pseudomonas aeruginosa ATCC
700888]
gi|404537112|gb|EKA46727.1| hypothetical protein PABE173_4552 [Pseudomonas aeruginosa ATCC
25324]
Length = 393
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 197/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+R++ G P V T +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHVDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCVFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSPKPEEQRALKREIEMEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG + +P G A + + G
Sbjct: 295 DFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPIKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
A G T VL GYS I EL
Sbjct: 355 LPAPRHIGAALGADTVAVLEGLGYSAERIAEL 386
>gi|398873073|ref|ZP_10628339.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM74]
gi|398200689|gb|EJM87598.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM74]
Length = 393
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 200/399 (50%), Gaps = 41/399 (10%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L V+K L D++LE FR GVME+L LG D L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPEALDVIKQLLQDYDIVLEQFRPGVMERLGLGYDALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL LSG+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALSGLASYTGRADTGPLPLGMQVADVAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R +SG+GQ +D +M + G+ YL + +P EN + G F
Sbjct: 185 IARQQSGQGQHLDVSMTDCAFSLNALAGAGYLACGV----------EPGPENQVLNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKE 274
YD Y ++DGR+++VG+LE F QL A LG+ E P H+ + A L +F++
Sbjct: 235 YDYYRSRDGRWLSVGSLEPVFMKQLCAALGLEELAGLGLSPQPAHQKQLKDA-LRVEFEK 293
Query: 275 KTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTP 332
AE +F DACV PVLSL +A HP R + +P G A L +
Sbjct: 294 HDFAELRALFAELDACVEPVLSLGEALCHPQLQARELVTDVPRDDGSTQAQMACPLKFSE 353
Query: 333 GTSKITEHNPAPGVHTREVLRHFGYSDANIEELIREDVI 371
G + A G HT +VL G+S I EL VI
Sbjct: 354 GLPEPKHIGVALGQHTDQVLGELGFSVERIAELRFAKVI 392
>gi|15596385|ref|NP_249879.1| hypothetical protein PA1188 [Pseudomonas aeruginosa PAO1]
gi|254234321|ref|ZP_04927644.1| hypothetical protein PACG_00161 [Pseudomonas aeruginosa C3719]
gi|296390441|ref|ZP_06879916.1| hypothetical protein PaerPAb_19906 [Pseudomonas aeruginosa PAb1]
gi|386059906|ref|YP_005976428.1| hypothetical protein PAM18_3845 [Pseudomonas aeruginosa M18]
gi|416856345|ref|ZP_11911967.1| hypothetical protein PA13_08940 [Pseudomonas aeruginosa 138244]
gi|416873427|ref|ZP_11917485.1| hypothetical protein PA15_05368 [Pseudomonas aeruginosa 152504]
gi|418583343|ref|ZP_13147412.1| hypothetical protein O1O_01765 [Pseudomonas aeruginosa MPAO1/P1]
gi|418591451|ref|ZP_13155349.1| hypothetical protein O1Q_12581 [Pseudomonas aeruginosa MPAO1/P2]
gi|419752341|ref|ZP_14278749.1| hypothetical protein CF510_04960 [Pseudomonas aeruginosa
PADK2_CF510]
gi|420140809|ref|ZP_14648541.1| hypothetical protein PACIG1_4056 [Pseudomonas aeruginosa CIG1]
gi|421515816|ref|ZP_15962502.1| hypothetical protein A161_06085 [Pseudomonas aeruginosa PAO579]
gi|9947114|gb|AAG04577.1|AE004549_4 hypothetical protein PA1188 [Pseudomonas aeruginosa PAO1]
gi|126166252|gb|EAZ51763.1| hypothetical protein PACG_00161 [Pseudomonas aeruginosa C3719]
gi|334842048|gb|EGM20663.1| hypothetical protein PA13_08940 [Pseudomonas aeruginosa 138244]
gi|334844886|gb|EGM23455.1| hypothetical protein PA15_05368 [Pseudomonas aeruginosa 152504]
gi|347306212|gb|AEO76326.1| hypothetical protein PAM18_3845 [Pseudomonas aeruginosa M18]
gi|375046951|gb|EHS39500.1| hypothetical protein O1O_01765 [Pseudomonas aeruginosa MPAO1/P1]
gi|375049753|gb|EHS42242.1| hypothetical protein O1Q_12581 [Pseudomonas aeruginosa MPAO1/P2]
gi|384401351|gb|EIE47706.1| hypothetical protein CF510_04960 [Pseudomonas aeruginosa
PADK2_CF510]
gi|403246427|gb|EJY60151.1| hypothetical protein PACIG1_4056 [Pseudomonas aeruginosa CIG1]
gi|404349544|gb|EJZ75881.1| hypothetical protein A161_06085 [Pseudomonas aeruginosa PAO579]
gi|453048337|gb|EME96050.1| hypothetical protein H123_02695 [Pseudomonas aeruginosa PA21_ST175]
Length = 393
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 197/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+R++ G P V T +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHVDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSPKPEEQRALKREIEMEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG + +P G A + + G
Sbjct: 295 DFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPIKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
A G T VL GYS I EL
Sbjct: 355 LPAPRHIGAALGADTVAVLEGLGYSAERIAEL 386
>gi|169794808|ref|YP_001712601.1| hypothetical protein ABAYE0631 [Acinetobacter baumannii AYE]
gi|213157866|ref|YP_002320664.1| alpha-methylacyl-CoA racemase [Acinetobacter baumannii AB0057]
gi|215482353|ref|YP_002324535.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB307-0294]
gi|301346269|ref|ZP_07227010.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB056]
gi|301511383|ref|ZP_07236620.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB058]
gi|301594873|ref|ZP_07239881.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB059]
gi|332852260|ref|ZP_08434065.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013150]
gi|332870483|ref|ZP_08439247.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013113]
gi|417573464|ref|ZP_12224318.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC-5]
gi|421643212|ref|ZP_16083717.1| CoA-transferase family III protein [Acinetobacter baumannii IS-235]
gi|421646817|ref|ZP_16087257.1| CoA-transferase family III protein [Acinetobacter baumannii IS-251]
gi|421659496|ref|ZP_16099714.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-83]
gi|421701399|ref|ZP_16140903.1| CoA-transferase family III protein [Acinetobacter baumannii IS-58]
gi|421797863|ref|ZP_16233898.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-21]
gi|169147735|emb|CAM85598.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|213057026|gb|ACJ41928.1| alpha-methylacyl-CoA racemase [Acinetobacter baumannii AB0057]
gi|213989067|gb|ACJ59366.1| CoA-transferase family III family protein [Acinetobacter baumannii
AB307-0294]
gi|332729390|gb|EGJ60730.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013150]
gi|332732220|gb|EGJ63488.1| III protein, CoA-transferase family [Acinetobacter baumannii
6013113]
gi|400209032|gb|EJO40002.1| CoA-transferase family III protein [Acinetobacter baumannii Canada
BC-5]
gi|404567566|gb|EKA72686.1| CoA-transferase family III protein [Acinetobacter baumannii IS-58]
gi|408510067|gb|EKK11731.1| CoA-transferase family III protein [Acinetobacter baumannii IS-235]
gi|408517169|gb|EKK18719.1| CoA-transferase family III protein [Acinetobacter baumannii IS-251]
gi|408707259|gb|EKL52547.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-83]
gi|410395832|gb|EKP48121.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-21]
Length = 372
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 178/333 (53%), Gaps = 25/333 (7%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVG 48
AL G+ VL+F+ L P PF M L + GA VI I+ Q +
Sbjct: 4 ALNGLKVLDFSTLLPGPFATMYLADMGAEVIHIESPSRPDLIRIMPPYANGQATAHSYLN 63
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+S+ ++LK A + ++K+ ++ DV++E FR VM +L L L + NPRLIY +
Sbjct: 64 RNKQSIVLDLKDAASIDLIKDKISEFDVVIEQFRPDVMRRLGLDYATLAEINPRLIYCSI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ G Y AGHDINYL L+GI G ++ P P AD GG L + I+ A
Sbjct: 124 TGYGQTGSYKDRAGHDINYLALAGIAGYSGRQDSGPPPLGIQVADIAGGSLHAVIAILAA 183
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+ ERS+SG GQ ID +M + A L S ++ + +L+GG FYD Y T+D
Sbjct: 184 VVERSRSGIGQYIDISMTDCVASLNSMAASATLAAQVEQAPEQGMLNGGI-FYDYYMTQD 242
Query: 229 GRFMAVGALESQFYAQLLAGL--------GMTEEELPQHEVETGRAKLTEKFKEKTQAEW 280
GR++++G+LE QF A L A L G + +E + EV + + EK K KT EW
Sbjct: 243 GRYLSIGSLEPQFMAGLSAALDLPVLLQKGASLDEQDRQEV---KQAIQEKIKAKTFKEW 299
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI 313
EIF N D CV PVLSLS+A + P RG +
Sbjct: 300 HEIFANLDVCVEPVLSLSEALNSPLAQQRGWIV 332
>gi|424940395|ref|ZP_18356158.1| hypothetical [Pseudomonas aeruginosa NCMG1179]
gi|346056841|dbj|GAA16724.1| hypothetical [Pseudomonas aeruginosa NCMG1179]
Length = 393
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 197/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+R++ G P V T +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHVDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSPKPEEQRALKREIEMEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG + +P G A + + G
Sbjct: 295 DFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPIKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
A G T VL GYS I EL
Sbjct: 355 LPAPRHIGTALGADTVAVLEGLGYSAERIAEL 386
>gi|398996306|ref|ZP_10699166.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM21]
gi|398127265|gb|EJM16678.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM21]
Length = 393
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 203/391 (51%), Gaps = 25/391 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK--------------HGAQPFVQDTVG 48
L + VL+F+ L P PF ++L + GA V+RI+ HG +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDHGVSA-SHAYLN 63
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+SL ++LK+ + L V+K L D++LE FR GVME+L LG + L NP+LIY +
Sbjct: 64 RNKRSLGLDLKQPEALEVIKLLLADYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ GPY AGHDINYL L+G+ S G + P P AD GG L +G++ A
Sbjct: 124 TGYGQTGPYKDRAGHDINYLALAGLASYTGRADGGPLPLGMQVADVAGGSLHGVIGLLAA 183
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+ R ++G+GQ +D +M + + L + + R + +L+GG+ FYD Y ++D
Sbjct: 184 VIARQQTGQGQHLDVSMTDCAFSLNAMAGAGYLACGAEPGREDQMLNGGS-FYDYYRSRD 242
Query: 229 GRFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKEKTQAEWCE 282
GR+++VG+LE F L LG+ E P + + A +TE F++ ++ C
Sbjct: 243 GRWLSVGSLEPAFMKPLCTALGLEELAPLGLSPKPADQKKLKDALMTE-FEKHDFSDLCA 301
Query: 283 IFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEH 340
+F DACV PVLSLS+A HP R + +P G A L + G +
Sbjct: 302 LFAELDACVEPVLSLSEAIEHPQLKARELVAEVPRGDGTSQAQMACPLKFSEGLPEPRHI 361
Query: 341 NPAPGVHTREVLRHFGYSDANIEELIREDVI 371
A G HT +VL G+S IEEL R VI
Sbjct: 362 GAALGQHTDQVLGELGFSAQRIEELRRAKVI 392
>gi|399001074|ref|ZP_10703793.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM18]
gi|398128531|gb|EJM17918.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM18]
Length = 393
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 199/389 (51%), Gaps = 21/389 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ + L V+K L D++LE FR GVME+L LG + L NPRLIY ++
Sbjct: 65 NKRSLALDLKQPEALEVIKQLLADYDIVLEQFRPGVMERLGLGYEALKAVNPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGLSSYTGRADSGPLPLGMQVADVAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
R ++G+GQ +D +M + + L + + R + +L+GG+ FYD Y ++DG
Sbjct: 185 IARQQTGQGQHLDVSMTDCAFSLNAMAGAGYLACGVEPGREDQMLNGGS-FYDYYRSRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAK-----LTEKFKEKTQAEWCEIF 284
R+++VG+LE F QL LG E + R + L +F++ A CE+F
Sbjct: 244 RWLSVGSLEPGFMQQLCTTLGRPELAAEGLSPDPARQQALKDALNIEFEKHDFAWLCELF 303
Query: 285 DNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKITEHNP 342
DACV PVLSL +A HP R + +P G A L + G +
Sbjct: 304 AGVDACVEPVLSLGEAVGHPQLKARELVTEVPRGDGSTQAQMACPLKFSAGLPEPRHIGA 363
Query: 343 APGVHTREVLRHFGYSDANIEELIREDVI 371
G HT +VLR G+S IEEL V+
Sbjct: 364 RLGQHTDQVLRELGFSAQRIEELRMAKVV 392
>gi|218892848|ref|YP_002441717.1| hypothetical protein PLES_41331 [Pseudomonas aeruginosa LESB58]
gi|254239555|ref|ZP_04932877.1| hypothetical protein PA2G_00172 [Pseudomonas aeruginosa 2192]
gi|421155315|ref|ZP_15614793.1| hypothetical protein PABE171_4151 [Pseudomonas aeruginosa ATCC
14886]
gi|126192933|gb|EAZ56996.1| hypothetical protein PA2G_00172 [Pseudomonas aeruginosa 2192]
gi|218773076|emb|CAW28888.1| hypothetical [Pseudomonas aeruginosa LESB58]
gi|404520699|gb|EKA31360.1| hypothetical protein PABE171_4151 [Pseudomonas aeruginosa ATCC
14886]
Length = 393
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 196/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + VL+F+ L P PF ++L + GA V+R++ G V+ +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHIDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSPKPEEQRALKREIEMEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
AEW +F DACV P+L LS+A HP RG + +P G A + + G
Sbjct: 295 DFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPIKFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
A G T VL GYS I EL
Sbjct: 355 LPAPRHIGAALGADTVAVLEGLGYSAERIAEL 386
>gi|421181826|ref|ZP_15639313.1| hypothetical protein PAE2_3778 [Pseudomonas aeruginosa E2]
gi|404543090|gb|EKA52391.1| hypothetical protein PAE2_3778 [Pseudomonas aeruginosa E2]
Length = 393
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 197/393 (50%), Gaps = 41/393 (10%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQ-------PFVQDT------VGY 49
L + VL+F+ L P PF ++L + GA V+R++ G P V T +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGADVLRVESPGRMDLVRVLPPHVDGTSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ V+ L + D++LE FR GVM+KL +G + L +NPRLIY ++
Sbjct: 65 NKRSIGLDLKRQGAREVVLELVREYDIVLEQFRPGVMDKLGVGYEALKAANPRLIYVAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R R P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRERAGHDINYLALAGVASYTGRRERGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + + +P E L G F
Sbjct: 185 IHRQQTGEGQFVDISMTDCAFSLNGMAGAGYLAAGV----------EPEMEALALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKE 274
YD Y T+DGR+ +VG+LE QF Q A +G E P+ + R ++ +F++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELASRGLSPKPEEQRALKR-EIEMEFEK 293
Query: 275 KTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTP 332
+ AEW +F DACV P+L LS+A HP RG + +P G A + +
Sbjct: 294 RDFAEWQAVFAALDACVEPLLPLSEALEHPQLQARGLVARVPLADGGSQAQMACPIKFSA 353
Query: 333 GTSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
G A G T VL GYS I EL
Sbjct: 354 GLPAPRHIGAALGADTVAVLEGLGYSAERIAEL 386
>gi|429213335|ref|ZP_19204500.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
sp. M1]
gi|428157817|gb|EKX04365.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
sp. M1]
Length = 393
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 199/392 (50%), Gaps = 39/392 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ------DTVGYG------ 50
L + VL+F+ L P PF ++L + GA V+R++ V+ D V
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGARVLRVESPTRMDLVRVLPPHDDGVSASHAYLNR 64
Query: 51 -KKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ + + V+K L + D++LE FR GVM+KL +G + L NP+LIY ++
Sbjct: 65 NKRSIALDLKRPEAVEVVKQLVREYDIVLEQFRPGVMDKLGVGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G R+ P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRDRAGHDINYLALAGVASYTGRRDTGPLPLGVQLADIAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
R ++G GQ +D +M + G+ YL + +P E G F
Sbjct: 185 IHRQQTGEGQQVDISMTDCAFSLNGMAGAGYLACGV----------EPGMEAQALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVET-GRAKLTEKFKEK 275
YD Y T+DGR+ +VG+LE QF Q A +G E P+ E + + ++ +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSPKAEDQRLLKREIAIEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPG 333
A+WCE F DACV P+L LS+A HP R + +P G A + + G
Sbjct: 295 DFADWCERFAAVDACVEPMLPLSEAVEHPQIQARRLVTEVPRGDGRSQRQMACPIRFSAG 354
Query: 334 TSKITEHNPAPGVHTREVLRHFGYSDANIEEL 365
A G H+ EVL GYSD + L
Sbjct: 355 LPAPKHIGVAAGAHSAEVLAELGYSDEQVAAL 386
>gi|254466559|ref|ZP_05079970.1| alpha-methylacyl-CoA racemase [Rhodobacterales bacterium Y4I]
gi|206687467|gb|EDZ47949.1| alpha-methylacyl-CoA racemase [Rhodobacterales bacterium Y4I]
Length = 361
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 193/373 (51%), Gaps = 34/373 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY--------GKKSL 54
L+GI +LE GL P PF M L + GA VI + + P+ T G GK+S+
Sbjct: 2 LQGIRILEVEGLGPGPFAAMTLADLGAEVICVHR----PYTGRTPGMPENSLLDRGKRSI 57
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK +G LA + ++E FR GVME+L LGP NP L+Y R++G+GQD
Sbjct: 58 TLDLKTPEGAETFLKLAETAHGLIEGFRPGVMERLGLGPTECHAVNPGLVYGRMTGWGQD 117
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRN----PTPPCNLAADFGGGGLMCALGIVMALF 170
P + AGHD+NY+ LSG L W N P P L D GGG + G++ +
Sbjct: 118 SPLAHAAGHDLNYISLSGAL----WYASNPGDVPLTPATLVGDIGGGAMYLVAGMLAGIL 173
Query: 171 ERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGR 230
G G V+D + +GSA++ + L + + RG NLLD G H+ TY G
Sbjct: 174 RAESGGGGCVVDAAIYDGSAHMMNLLMSIRQAGNFGVTRGANLLD-GPHWSRTYACAGGG 232
Query: 231 FMAVGALESQFYAQLLAGLGMTEEELPQHEVE-------TGRAKLTEKFKEKTQAEWCEI 283
+++V LE +FYA L LG+ EE Q + TGR L F + + W +
Sbjct: 233 YVSVQCLEPKFYALFLEKLGLAEEAEFQQQFNKALWPALTGR--LAGIFASQPRDHWAAL 290
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPA 343
F+ +DACV PVL+ +A +H N RG+++ ++ GV+ APAPR S PG + P
Sbjct: 291 FEGSDACVAPVLNPEEAQAHVMNA-RGTWVEDQ-GVLQAAPAPRFSGQPGW--VPPEIPR 346
Query: 344 PGVHTREVLRHFG 356
G HTRE+L G
Sbjct: 347 RGQHTREILAELG 359
>gi|120554954|ref|YP_959305.1| alpha-methylacyl-CoA racemase [Marinobacter aquaeolei VT8]
gi|120324803|gb|ABM19118.1| Alpha-methylacyl-CoA racemase [Marinobacter aquaeolei VT8]
Length = 350
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 185/335 (55%), Gaps = 21/335 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVGY 49
L + +L+F+ L P P+ M+L + GA V+RI+ G +G
Sbjct: 5 LANLKILDFSTLLPGPYATMMLADMGAEVLRIEAPDRVDLAKVMPPFDGKFSTTFSYLGR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
GK++L +NLK+ + + +K L D+++E FR GVM++L +G +VL NP+LIY ++
Sbjct: 65 GKQTLQLNLKQPESVEKVKQLVQDYDIVVEQFRPGVMDRLGIGYEVLKAINPKLIYCAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL +SG+ S G + P P AD GG +GI+ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLAISGVASHCGRADSGPPPMGIQIADVAGGSHHAVMGILAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
+R ++G G ID +M + + L + + +L+GG FYD Y+T+DG
Sbjct: 185 IKRQETGEGAFIDISMTDAAFALNAMAGAAALAGGQPQKPESGMLNGGT-FYDYYQTRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKEKTQAEWCEI 283
R+++VG+LE QF ++L LG+ E + P+H+ E +A + +K E++ AEW E+
Sbjct: 244 RWLSVGSLEPQFSSRLCDTLGLGELKSYALSQKPEHQQEL-KAAIKQKIAERSLAEWREV 302
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAG 318
F + DACV PVL++ +A HP RG + G
Sbjct: 303 FADVDACVEPVLTIEEAAEHPQLKARGMVVERDRG 337
>gi|452950792|gb|EME56244.1| alpha-methylacyl-CoA racemase Mcr [Rhodococcus ruber BKS 20-38]
Length = 334
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 179/305 (58%), Gaps = 6/305 (1%)
Query: 31 VIRIDKHGAQPFVQDTVGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQ 90
+IR+++ + P G+ + +LK + ++++ LA +DV++E FR GVME+L
Sbjct: 1 MIRLERTASTPASNSFTFRGRTVVEADLKDEQDRALVRKLALSADVLVEGFRPGVMERLG 60
Query: 91 LGPDVLCKSNPRLIYARLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNL 150
GPD L +N L+YAR++G+GQ GP + GHD++YL + G + ++P PP N+
Sbjct: 61 FGPDELTAANTSLVYARMTGWGQTGPAAHEPGHDLSYLAMVGAARSIAHEGQDPVPPLNM 120
Query: 151 AADFGGGGLMCALGIVMALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRG 210
AD+ GGGL+ A GI +ALFERS+SG GQVID M + + L S L + + W G
Sbjct: 121 VADY-GGGLLLAYGIGLALFERSRSGVGQVIDAAMADAALLLMSGLWQRKADGHWSDTPG 179
Query: 211 ENLLDGGAHFYDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVET----GRA 266
N +D GA Y++Y T DG +MAV + E +F+A + LG+ E E T +
Sbjct: 180 TNDMDSGAPHYNSYRTSDGHYMAVASAEPKFFANMTRILGLENELAGTREDRTRWREAKH 239
Query: 267 KLTEKFKEKTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAP 326
+ + F KT+ EW E+F +ACVTPV ++S+ + PH V S + +R G V PA AP
Sbjct: 240 TIAQVFATKTRDEWTELFTGAEACVTPVNAVSEVAADPH-VRARSMMLDRDGAVFPAAAP 298
Query: 327 RLSRT 331
RLSRT
Sbjct: 299 RLSRT 303
>gi|445488969|ref|ZP_21458512.1| CoA-transferase family III protein [Acinetobacter baumannii AA-014]
gi|444766963|gb|ELW91217.1| CoA-transferase family III protein [Acinetobacter baumannii AA-014]
Length = 372
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 177/333 (53%), Gaps = 25/333 (7%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVG 48
AL G+ VL+F+ L P PF M L + GA VI I+ Q +
Sbjct: 4 ALNGLKVLDFSTLLPGPFATMYLADMGAEVIHIESPSRPDLIRIMPPYANGQATAHSYLN 63
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+S+ ++LK A + ++K ++ DV++E FR VM +L L L + NPRLIY +
Sbjct: 64 RNKQSIVLDLKNAASIDLIKAKISEFDVVIEQFRPDVMRRLGLDYATLAEINPRLIYCSI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ G Y AGHDINYL L+GI G ++ P P AD GG L + I+ A
Sbjct: 124 TGYGQTGSYKDRAGHDINYLALAGIAGYSGRQDSGPPPLGIQVADIAGGSLHAVIAILAA 183
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+ ERS+SG GQ ID +M + A L S ++ + +L+GG FYD Y T+D
Sbjct: 184 VVERSRSGIGQYIDISMTDCVASLNSMAASATLAAQVEQAPEQGMLNGGI-FYDYYMTQD 242
Query: 229 GRFMAVGALESQFYAQLLAGL--------GMTEEELPQHEVETGRAKLTEKFKEKTQAEW 280
GR++++G+LE QF A L A L G + +E + EV + + EK K KT EW
Sbjct: 243 GRYLSIGSLEPQFMAGLSAALDLPVLLQKGASLDEQDRQEV---KQAIQEKIKAKTFKEW 299
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI 313
EIF N D CV PVLSLS+A + P RG +
Sbjct: 300 HEIFANLDVCVEPVLSLSEALNSPLAQQRGWIV 332
>gi|94311624|ref|YP_584834.1| alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
gi|93355476|gb|ABF09565.1| Alpha-methylacyl-CoA racemase [Cupriavidus metallidurans CH34]
Length = 344
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 183/340 (53%), Gaps = 18/340 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG--------YGKKSL 54
L+GI ++EF G+ P P G +L + GA V I + + V D +G GK +
Sbjct: 5 LQGIRIVEFEGIGPGPLAGRMLADMGAEVTVIARR-QRVAVADQLGGDKPSPLRRGKVIV 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK+ L+ L + +D ++E R GVME+L LGP NP+L+Y R++G+GQ
Sbjct: 64 PLDLKQPDDLAEATRLVDGADALIEGNRPGVMERLGLGPADCAARNPKLVYGRMTGWGQS 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHD+NY+ L+G+LSL P P + D GG L A G+V AL +
Sbjct: 124 GPLAQTAGHDLNYVALTGMLSLSARPGEAPMIPPTVVGD-AGGALGLAFGVVCALLDARA 182
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
SGRG+V+D +V+ A LGS ++ D P + FYD Y DG F+ +
Sbjct: 183 SGRGRVVDGAIVDMVAMLGSIAVWVRNNGQLDGPTPSPFHQ--SPFYDVYGCADGGFITI 240
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDA 289
GALE QFYA LL LGMT+ + P + + + + T F + +A W + TD
Sbjct: 241 GALEPQFYALLLERLGMTDVD-PAAQYDHAAWPALKQRFTRLFASEPRAHWDALLGGTDV 299
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS 329
C PVLS+++A+ HPHNV RG FI G + A APR +
Sbjct: 300 CYAPVLSIAEASRHPHNVARGVFIAQEDGALDVAGAPRFA 339
>gi|398970178|ref|ZP_10683230.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM30]
gi|398140889|gb|EJM29835.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM30]
Length = 393
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 206/400 (51%), Gaps = 43/400 (10%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ-------------DTVGY 49
L + +L+F+ L P PF ++L + GA V+RI+ ++ +
Sbjct: 5 LASLKILDFSTLLPGPFASLLLADMGAEVLRIESPTRMDLLRVLPPHDQGVSASHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+SL ++LK+ L V++ L + D++LE FR GVME+L LG + L NP+LIY ++
Sbjct: 65 NKRSLALDLKQPGALEVVRQLLGEYDIVLEQFRPGVMERLGLGYEALKAINPKLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G + P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGLSSYTGRADSGPLPLGMQVADIAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGS----AYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYE 225
R +SG+G +D +M + + A G+ + W+ E +L+GG+ FYD Y
Sbjct: 185 IARQQSGQGTHLDVSMTDCAFSLNAMAGAGYLACGEEPHWE----EQMLNGGS-FYDYYR 239
Query: 226 TKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVE-TGRAKLTEKFKEKTQAEW 280
++DGR+++VG+LE F QL + LG E P+ E + + L +F++ AE
Sbjct: 240 SRDGRWLSVGSLEPGFMQQLCSALGRPELAAQGLSPKPEQQRLLKDALKVEFEKHDFAEL 299
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTPGTSKIT 338
CE+F DACV PVL+LS+A HP R + +P G A L K +
Sbjct: 300 CELFARVDACVEPVLNLSEAVQHPQLQARELVTLVPRGDGTTQAQIACPL-------KFS 352
Query: 339 EHNPAP-------GVHTREVLRHFGYSDANIEELIREDVI 371
E PAP G HT +VL G+ I EL R VI
Sbjct: 353 EALPAPRHVGAGLGQHTEQVLGELGFDAERIAELRRAKVI 392
>gi|262371740|ref|ZP_06065019.1| alpha-methylacyl-CoA racemase [Acinetobacter junii SH205]
gi|262311765|gb|EEY92850.1| alpha-methylacyl-CoA racemase [Acinetobacter junii SH205]
Length = 372
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 175/333 (52%), Gaps = 31/333 (9%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGYG----------- 50
ALKG+ VL+F+ L P PF M L + GA VI ++ V+ Y
Sbjct: 4 ALKGLKVLDFSTLLPGPFASMYLADMGAEVIHVESPSRPDLVRIMPPYANGQATAHSYLN 63
Query: 51 --KKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+S+ ++LK A + ++KN ++ D++LE FR VM +L L + L + NPRLIY +
Sbjct: 64 RNKQSITLDLKDAANIELIKNKISEFDILLEQFRPDVMRRLGLDYETLAEINPRLIYCSI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ G Y AGHDINYL L+GI G ++ P P AD GG L +GI+ A
Sbjct: 124 TGYGQTGTYKDRAGHDINYLALAGISGHSGRQDSGPPPLGVQIADVAGGSLHAVIGILAA 183
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRG-ENLLDGGAHFYDTYETK 227
+ ER +SG GQ ID +M + A L S + P+G E + GA FYD YETK
Sbjct: 184 VVERQRSGMGQYIDISMTDCVASLNSMAASA--SLAGQTPQGPEQGMLNGAIFYDYYETK 241
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELP----------QHEVETGRAKLTEKFKEKTQ 277
DGR+ +VG+LE QF L A L ELP + + + L EKF+ K
Sbjct: 242 DGRYFSVGSLEPQFMTGLAAAL-----ELPILMAKGSSFDPEDRQAIKQALKEKFRSKDF 296
Query: 278 AEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG 310
AEW IF D CV PVLSL +A + P RG
Sbjct: 297 AEWQSIFSQLDICVEPVLSLDEALTSPIAKQRG 329
>gi|398865667|ref|ZP_10621181.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
gi|398242771|gb|EJN28377.1| putative acyl-CoA transferase/carnitine dehydratase [Pseudomonas
sp. GM78]
Length = 373
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 199/360 (55%), Gaps = 35/360 (9%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ--------DTVGYGKKSL 54
L G+ ++EF G+ PAP GM+L + GA V I + G + D + GK+ +
Sbjct: 4 LAGLKIIEFEGIGPAPLAGMLLADMGAEVTVIARKGGIALAKQLGGDIDIDILQRGKRRV 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
I+LK +G+++ +L + +D ++E R GVME+L LGP+ N RL+Y RL+G+GQ+
Sbjct: 64 IIDLKHPEGVALALDLLSLADALIEGNRPGVMERLGLGPEQCLAKNSRLVYGRLTGWGQE 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHD+NY+ L+G+L L G R+ PP LA D G L A GIV A FE
Sbjct: 124 GPLAQAAGHDLNYIALTGLLGLTGGRSDPQRPPATLAGD-AIGALGMAFGIVSAAFEARD 182
Query: 175 SGRGQVIDCNMVEGSAYLGS---------WLTRTQDTFLWDKPRGENLLDGGAHFYDTYE 225
SG+GQV+D +V+ A LGS + +Q + +D P FYD ++
Sbjct: 183 SGKGQVVDTAIVDMVAVLGSIAHFIHAAGQIGGSQPSAFYDSP-----------FYDLFQ 231
Query: 226 TKDGRFMAVGALESQFYAQLLAGLGMTEEEL-PQHEVETGRA---KLTEKFKEKTQAEWC 281
DG ++++ LE QFYAQL+ L +++ + Q+++ A +LT F+ K +A WC
Sbjct: 232 CADGEWVSLAPLEPQFYAQLVERLQLSDVVIKAQYDLAQWPALKERLTTLFRSKPRAHWC 291
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
+ + +D C PVLS A HPHNV R +F VV PAPR SRTPGT +H
Sbjct: 292 AMLEGSDVCFAPVLSPMDAAVHPHNVARNTF--QTRPVVQANPAPRFSRTPGTILPIDHQ 349
>gi|239501736|ref|ZP_04661046.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AB900]
gi|421678303|ref|ZP_16118188.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC111]
gi|410392490|gb|EKP44851.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC111]
Length = 372
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 177/333 (53%), Gaps = 25/333 (7%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVG 48
AL G+ VL+F+ L P PF M L + GA VI I+ Q +
Sbjct: 4 ALNGLKVLDFSTLLPGPFATMYLADMGAEVIHIESPSRPDLIRIMPPYANGQATAHSYLN 63
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+S+ ++LK A + ++K ++ D+++E FR VM +L L L + NPRLIY +
Sbjct: 64 RNKQSIVLDLKDAASIDLIKAKISEFDIVIEQFRPDVMRRLGLDYATLAEINPRLIYCSI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ G Y AGHDINYL L+GI G ++ P P AD GG L + I+ A
Sbjct: 124 TGYGQTGSYKDRAGHDINYLALAGIAGYSGRQDSGPPPLGIQVADIAGGSLHAVIAILAA 183
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+ ERS+SG GQ ID +M + A L S ++ + +L+GG FYD Y T+D
Sbjct: 184 VVERSRSGIGQYIDISMTDCVASLNSMAASATLAAQVEQAPEQGMLNGGI-FYDYYMTQD 242
Query: 229 GRFMAVGALESQFYAQLLAGL--------GMTEEELPQHEVETGRAKLTEKFKEKTQAEW 280
GR++++G+LE QF A L A L G + +E + EV + + EK K KT EW
Sbjct: 243 GRYLSIGSLEPQFMAGLSAALELPVLLQKGASLDEQDRQEV---KQAIQEKIKAKTFKEW 299
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI 313
EIF N D CV PVLSLS+A + P RG +
Sbjct: 300 HEIFANLDVCVEPVLSLSEALNSPLAQQRGWIV 332
>gi|171317196|ref|ZP_02906396.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria MEX-5]
gi|171097627|gb|EDT42461.1| L-carnitine dehydratase/bile acid-inducible protein F [Burkholderia
ambifaria MEX-5]
Length = 349
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 184/346 (53%), Gaps = 31/346 (8%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVGY--------GKKSL 54
L GI ++EF GL P P G +L GA + I + + D + GK +
Sbjct: 7 LSGIHIVEFEGLGPGPLAGWMLAGMGARITLIARPAGRTSAPDALQCRDGDLLREGKTVV 66
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK G L Q+D ++E R GVME+L LGPD + NP+L+Y R++G+GQD
Sbjct: 67 ELDLKTPDGRDAALALIAQADALIEGLRPGVMERLGLGPDACARRNPKLVYGRMTGWGQD 126
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP ++ AGHD+NY+ L+G+LSL R+ P P + D GG L A GIV ALF+
Sbjct: 127 GPLATAAGHDLNYVALTGLLSLSAPRDGRPGVPPTVVGD-AGGALGLAFGIVCALFDVRG 185
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGG-------AHFYDTYETK 227
SG G+V+D +V+ + LGS LW + G+ LDG A FYD Y
Sbjct: 186 SGVGRVVDGAIVDIVSMLGS-------LALWARANGQ--LDGAQPSLFHDAPFYDVYRCA 236
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCE 282
DG + +GALE FYA L+ LG+ + + P + + R A+ E F ++ A W
Sbjct: 237 DGECVTIGALEPPFYALLVERLGLADVD-PASQYDRARWPALKARFAEVFAQQPSAHWRA 295
Query: 283 IFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRL 328
+ + +DAC PVLS+++A HPHN RG + + G + APRL
Sbjct: 296 LLEGSDACFAPVLSVAEAVEHPHNAARGIYRVDGNGNIRARVAPRL 341
>gi|374996415|ref|YP_004971914.1| acyl-CoA transferase/carnitine dehydratase [Desulfosporosinus
orientis DSM 765]
gi|357214781|gb|AET69399.1| putative acyl-CoA transferase/carnitine dehydratase
[Desulfosporosinus orientis DSM 765]
Length = 391
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 196/391 (50%), Gaps = 28/391 (7%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------HGAQPFVQDT--------V 47
L GI +L+ L P + +L + GA V++++ +P++ T +
Sbjct: 5 LNGIRILDLTRLLPGGYASQLLADLGAEVLKVEDPWQGDYLRWMKPYLPGTKESALYWAL 64
Query: 48 GYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYAR 107
KKSL +NLK + G L + DV+LE FR GVM+ L L L K NP +I
Sbjct: 65 NRNKKSLTLNLKSSDGRKTFLRLVTKYDVVLEGFRPGVMDSLGLSYKELQKVNPSVILCS 124
Query: 108 LSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVM 167
+SGYGQ GPY+ +GHDINYL LSG L+L G P PP AD GGG LM GI+
Sbjct: 125 ISGYGQSGPYNRRSGHDINYLALSGALNLTGQAAGAPVPPAVQVADIGGGALMAVTGILS 184
Query: 168 ALFERSKSGRGQVIDCNMVEGSAYLGSWLTRT-QDTFLWDKP--RGENLLDGGAHFYDTY 224
A R ++GRGQ ID +M++G SW+ + D P RGE +L+GG Y Y
Sbjct: 185 AYIARLQTGRGQYIDVSMLDGVI---SWMAMLYAQQAVEDSPVKRGEGILNGGEVCYGIY 241
Query: 225 ETKDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEK---FKEKTQAEWC 281
ET+D RFM++GALE +F+ + +L + + L+E FK +TQ EW
Sbjct: 242 ETRDARFMSLGALEPKFWQAFCQAI--DRNDLADKQFTHDPSVLSEVQTIFKTRTQEEWT 299
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSF--IPNRAGVVAPAPAPRLSRTPGTSKITE 339
F++ D C PVL LS+ +HP R F + + G++ + L +
Sbjct: 300 AFFNDKDVCCEPVLELSEVRNHPQIQARNLFDLLRHPNGMLVEVLSNPLKFAEKVELPNQ 359
Query: 340 HNPAPGVHTREVLRHFGYSDANIEELIREDV 370
P G HTRE+L+ ++ I+ R ++
Sbjct: 360 IPPRLGEHTREILQDLRFTPEEIKMYERAEI 390
>gi|184159418|ref|YP_001847757.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ACICU]
gi|332876259|ref|ZP_08444034.1| III protein, CoA-transferase family [Acinetobacter baumannii
6014059]
gi|387122660|ref|YP_006288542.1| putative acyl-CoA transferase/carnitine dehydratase [Acinetobacter
baumannii MDR-TJ]
gi|407934009|ref|YP_006849652.1| acyl-CoA transferase/carnitine dehydratase [Acinetobacter baumannii
TYTH-1]
gi|417569221|ref|ZP_12220079.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC189]
gi|417577049|ref|ZP_12227894.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-17]
gi|417868619|ref|ZP_12513625.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH1]
gi|417874690|ref|ZP_12519537.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH2]
gi|417876424|ref|ZP_12521192.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH3]
gi|417883410|ref|ZP_12527655.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH4]
gi|421202766|ref|ZP_15659912.1| acyl- transferases carnitine dehydratase [Acinetobacter baumannii
AC12]
gi|421535473|ref|ZP_15981733.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC30]
gi|421628951|ref|ZP_16069705.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC180]
gi|421663476|ref|ZP_16103622.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC110]
gi|421673952|ref|ZP_16113888.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC065]
gi|421685960|ref|ZP_16125719.1| CoA-transferase family III protein [Acinetobacter baumannii IS-143]
gi|421692246|ref|ZP_16131898.1| CoA-transferase family III protein [Acinetobacter baumannii IS-116]
gi|421704682|ref|ZP_16144125.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ZWS1122]
gi|421708459|ref|ZP_16147836.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ZWS1219]
gi|421809779|ref|ZP_16245609.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC035]
gi|424051039|ref|ZP_17788573.1| hypothetical protein W9G_03340 [Acinetobacter baumannii Ab11111]
gi|424062199|ref|ZP_17799686.1| hypothetical protein W9M_02400 [Acinetobacter baumannii Ab44444]
gi|425750426|ref|ZP_18868392.1| CoA-transferase family III protein [Acinetobacter baumannii WC-348]
gi|425753091|ref|ZP_18870982.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-113]
gi|445404297|ref|ZP_21430944.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-57]
gi|445467088|ref|ZP_21450611.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC338]
gi|445478916|ref|ZP_21454938.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-78]
gi|183211012|gb|ACC58410.1| predicted acyl-CoA transferases/carnitine dehydratase
[Acinetobacter baumannii ACICU]
gi|193078289|gb|ABO13256.2| putative acyl-CoA transferase/carnitine dehydratase [Acinetobacter
baumannii ATCC 17978]
gi|332735531|gb|EGJ66583.1| III protein, CoA-transferase family [Acinetobacter baumannii
6014059]
gi|342228377|gb|EGT93270.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH2]
gi|342232384|gb|EGT97162.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH1]
gi|342235844|gb|EGU00404.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH4]
gi|342237662|gb|EGU02121.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ABNIH3]
gi|385877152|gb|AFI94247.1| putative acyl-CoA transferase/carnitine dehydratase [Acinetobacter
baumannii MDR-TJ]
gi|395553444|gb|EJG19450.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC189]
gi|395570270|gb|EJG30932.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-17]
gi|398327682|gb|EJN43814.1| acyl- transferases carnitine dehydratase [Acinetobacter baumannii
AC12]
gi|404560138|gb|EKA65383.1| CoA-transferase family III protein [Acinetobacter baumannii IS-116]
gi|404569463|gb|EKA74549.1| CoA-transferase family III protein [Acinetobacter baumannii IS-143]
gi|404666150|gb|EKB34101.1| hypothetical protein W9G_03340 [Acinetobacter baumannii Ab11111]
gi|404672242|gb|EKB40075.1| hypothetical protein W9M_02400 [Acinetobacter baumannii Ab44444]
gi|407189708|gb|EKE60933.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ZWS1122]
gi|407189978|gb|EKE61198.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii ZWS1219]
gi|407902590|gb|AFU39421.1| putative acyl-CoA transferase/carnitine dehydratase [Acinetobacter
baumannii TYTH-1]
gi|408704405|gb|EKL49774.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC180]
gi|408713200|gb|EKL58371.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC110]
gi|409986665|gb|EKO42858.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AC30]
gi|410385295|gb|EKP37788.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC065]
gi|410413570|gb|EKP65385.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC035]
gi|425486547|gb|EKU52913.1| CoA-transferase family III protein [Acinetobacter baumannii WC-348]
gi|425498373|gb|EKU64455.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-113]
gi|444773952|gb|ELW98041.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-78]
gi|444777062|gb|ELX01098.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC338]
gi|444782459|gb|ELX06360.1| CoA-transferase family III protein [Acinetobacter baumannii
Naval-57]
Length = 372
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 177/333 (53%), Gaps = 25/333 (7%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVG 48
AL G+ VL+F+ L P PF M L + GA VI I+ Q +
Sbjct: 4 ALNGLKVLDFSTLLPGPFATMYLADMGAEVIHIESPSRPDLIRIMPPYANGQATAHSYLN 63
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+S+ ++LK A + ++K ++ D+++E FR VM +L L L + NPRLIY +
Sbjct: 64 RNKQSIVLDLKDAASIDLIKAKISEFDIVIEQFRPDVMRRLGLDYATLAEINPRLIYCSI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ G Y AGHDINYL L+GI G ++ P P AD GG L + I+ A
Sbjct: 124 TGYGQTGSYKDRAGHDINYLALAGIAGYSGRQDSGPPPLGIQVADIAGGSLHAVIAILAA 183
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+ ERS+SG GQ ID +M + A L S ++ + +L+GG FYD Y T+D
Sbjct: 184 VVERSRSGIGQYIDISMTDCVASLNSMAASATLAAQVEQAPEQGMLNGGI-FYDYYMTQD 242
Query: 229 GRFMAVGALESQFYAQLLAGL--------GMTEEELPQHEVETGRAKLTEKFKEKTQAEW 280
GR++++G+LE QF A L A L G + +E + EV + + EK K KT EW
Sbjct: 243 GRYLSIGSLEPQFMAGLSAALDLPVLLQKGASLDEQDRQEV---KQAIQEKIKAKTFKEW 299
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI 313
EIF N D CV PVLSLS+A + P RG +
Sbjct: 300 HEIFANLDVCVEPVLSLSEALNSPLAQQRGWIV 332
>gi|384144529|ref|YP_005527239.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii MDR-ZJ06]
gi|416150416|ref|ZP_11603350.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AB210]
gi|333363995|gb|EGK46009.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii AB210]
gi|347595022|gb|AEP07743.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter
baumannii MDR-ZJ06]
Length = 377
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 177/333 (53%), Gaps = 25/333 (7%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVG 48
AL G+ VL+F+ L P PF M L + GA VI I+ Q +
Sbjct: 9 ALNGLKVLDFSTLLPGPFATMYLADMGAEVIHIESPSRPDLIRIMPPYANGQATAHSYLN 68
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+S+ ++LK A + ++K ++ D+++E FR VM +L L L + NPRLIY +
Sbjct: 69 RNKQSIVLDLKDAASIDLIKAKISEFDIVIEQFRPDVMRRLGLDYATLAEINPRLIYCSI 128
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ G Y AGHDINYL L+GI G ++ P P AD GG L + I+ A
Sbjct: 129 TGYGQTGSYKDRAGHDINYLALAGIAGYSGRQDSGPPPLGIQVADIAGGSLHAVIAILAA 188
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+ ERS+SG GQ ID +M + A L S ++ + +L+GG FYD Y T+D
Sbjct: 189 VVERSRSGIGQYIDISMTDCVASLNSMAASATLAAQVEQAPEQGMLNGGI-FYDYYMTQD 247
Query: 229 GRFMAVGALESQFYAQLLAGL--------GMTEEELPQHEVETGRAKLTEKFKEKTQAEW 280
GR++++G+LE QF A L A L G + +E + EV + + EK K KT EW
Sbjct: 248 GRYLSIGSLEPQFMAGLSAALDLPVLLQKGASLDEQDRQEV---KQAIQEKIKAKTFKEW 304
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI 313
EIF N D CV PVLSLS+A + P RG +
Sbjct: 305 HEIFANLDVCVEPVLSLSEALNSPLAQQRGWIV 337
>gi|430805370|ref|ZP_19432485.1| alpha-methylacyl-CoA racemase [Cupriavidus sp. HMR-1]
gi|429502407|gb|ELA00718.1| alpha-methylacyl-CoA racemase [Cupriavidus sp. HMR-1]
Length = 344
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 182/340 (53%), Gaps = 18/340 (5%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQDTVG--------YGKKSL 54
L+GI ++EF G+ P P G +L + GA V I + + V D +G GK +
Sbjct: 5 LQGIRIVEFEGIGPGPLAGWMLADMGAEVTVIARR-QRVAVADQLGGDKPSPLRRGKVIV 63
Query: 55 CINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQD 114
++LK+ L+ L + +D ++E R GVME+L LGP NP+L+Y R++G+GQ
Sbjct: 64 PLDLKQPDDLAEAMRLVDGADALIEGNRPGVMERLGLGPADCAARNPKLVYGRMTGWGQS 123
Query: 115 GPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSK 174
GP + AGHD+NY+ L+G+LSL P P + D GG L A GIV AL +
Sbjct: 124 GPLAQTAGHDLNYVALTGMLSLSARPGEAPMIPPTVVGD-AGGALGLAFGIVCALLDARA 182
Query: 175 SGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAV 234
SGRG+V+D +V+ A LGS ++ D P + FYD Y DG F+ +
Sbjct: 183 SGRGRVVDGAIVDMVAMLGSIAMWVRNNGQLDGPTPSPFHQ--SPFYDVYGCADGGFITI 240
Query: 235 GALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWCEIFDNTDA 289
GALE QFYA LL LGMT+ + P + + + + T F + +A W + TD
Sbjct: 241 GALEPQFYALLLERLGMTDVD-PAAQYDHAAWPALKQRFTRLFASEPRAHWDALLGGTDV 299
Query: 290 CVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLS 329
C PVLS+++A HPHNV RG FI G + A APR +
Sbjct: 300 CYAPVLSIAEAARHPHNVARGVFIAQEDGALDVAGAPRFA 339
>gi|146307991|ref|YP_001188456.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina ymp]
gi|145576192|gb|ABP85724.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
mendocina ymp]
Length = 393
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 199/397 (50%), Gaps = 55/397 (13%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVGY 49
L + VL+F+ L P PF ++L + GA V+R++ G +
Sbjct: 5 LSSLKVLDFSTLLPGPFASLLLADMGAEVLRVESPTRMDLVRVLPPHDGGTSTSHAYLNR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+ + + V+K L + D++LE FR VM+KL +G + L NPRLIY ++
Sbjct: 65 NKRSIALDLKRPEAVEVVKKLVAEYDIVLEQFRPRVMDKLGVGYEALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+GI S G R+ P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYRDRAGHDINYLALAGIASYTGRRDSGPLPLGVQLADIAGGSLHGVIGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
+R +G+GQ +D +M + G+ YLG+ + +P EN G F
Sbjct: 185 VQRQVTGQGQQVDVSMTDCAFSLHGMAGAGYLGAGV----------EPEMENQALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTEEEL----PQHEVETGRAKLTE-KFKEK 275
YD Y T+DGR+ +VG+LE QF Q LG E P+ E + + E +F+++
Sbjct: 235 YDYYRTRDGRWFSVGSLEPQFMQQFCQALGRPELAARGLSPKPEDQRALKREIEIEFEKR 294
Query: 276 TQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTS 335
A+W E F DACV P+L LS+A HP I RA +VA P L P +
Sbjct: 295 DFADWRERFAALDACVEPMLPLSEALEHPQ-------IKARA-LVAEVPREGLPAQPQLA 346
Query: 336 ---KITEHNPAP-------GVHTREVLRHFGYSDANI 362
K + PAP G HT +VL GY I
Sbjct: 347 CPLKFSHGLPAPRHVGAALGAHTAQVLAELGYDAEQI 383
>gi|403674750|ref|ZP_10936980.1| acyl-CoA transferases/carnitine dehydratase [Acinetobacter sp. NCTC
10304]
gi|421651318|ref|ZP_16091688.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC0162]
gi|408508497|gb|EKK10181.1| CoA-transferase family III protein [Acinetobacter baumannii
OIFC0162]
Length = 372
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 177/333 (53%), Gaps = 25/333 (7%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVG 48
AL G+ VL+F+ L P PF M L + GA VI I+ Q +
Sbjct: 4 ALNGLKVLDFSTLLPGPFATMYLADMGAEVIHIESPSRPDLIRIMPPYANGQATAHSYLN 63
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+S+ ++LK A + ++K ++ D+++E FR VM +L L L + NPRLIY +
Sbjct: 64 RNKQSIVLDLKDAASIDLIKAKISEFDIVIEQFRPDVMRRLGLDYATLAEINPRLIYCSI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ G Y AGHDINYL L+GI G ++ P P AD GG L + I+ A
Sbjct: 124 TGYGQTGSYKDRAGHDINYLALAGIAGYSGRQDSGPPPLGIQVADIAGGSLHAVIAILAA 183
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+ ERS+SG GQ ID +M + A L S ++ + +L+GG FYD Y T+D
Sbjct: 184 VVERSRSGIGQYIDISMTDCVASLNSMAASATLAAQVEQTPEQGMLNGGI-FYDYYMTQD 242
Query: 229 GRFMAVGALESQFYAQLLAGL--------GMTEEELPQHEVETGRAKLTEKFKEKTQAEW 280
GR++++G+LE QF A L A L G + +E + EV + + EK K KT EW
Sbjct: 243 GRYLSIGSLEPQFMAGLSAALDLPVLLQKGASLDEQDRQEV---KQAIQEKIKAKTFKEW 299
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI 313
EIF N D CV PVLSLS+A + P RG +
Sbjct: 300 HEIFANLDVCVEPVLSLSEALNSPLAQQRGWIV 332
>gi|387813683|ref|YP_005429166.1| alpha-methylacyl-CoA racemase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381338696|emb|CCG94743.1| putative Alpha-methylacyl-CoA racemase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 350
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 185/335 (55%), Gaps = 21/335 (6%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVGY 49
L + +L+F+ L P P+ M+L + GA V+RI+ G +G
Sbjct: 5 LANLKILDFSTLLPGPYATMMLADMGAEVLRIEAPDRVDLAKVMPPFDGKFSTTFSYLGR 64
Query: 50 GKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
GK++L +NLK+ + + +K L D+++E FR GVM++L +G +VL NP+LIY ++
Sbjct: 65 GKQTLQLNLKQPESVEKVKQLVQDYDIVVEQFRPGVMDRLGIGYEVLKAINPKLIYCAIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL +SG+ S G + P P AD GG +GI+ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLAISGVASHCGRADSGPPPMGIQVADVAGGSHHAVMGILAAV 184
Query: 170 FERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDG 229
+R ++G G ID +M + + L + + +L+GG FYD Y+T+DG
Sbjct: 185 IKRQETGEGAFIDISMTDAAFALNAMAGAAALAGGQPQKPESGMLNGGT-FYDYYQTRDG 243
Query: 230 RFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKEKTQAEWCEI 283
R+++VG+LE QF ++L LG+ + + P+H+ E +A + +K E++ AEW E+
Sbjct: 244 RWLSVGSLEPQFSSRLCDTLGLGKLKSYALSQKPEHQQEL-KAAIKQKIAERSLAEWREV 302
Query: 284 FDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAG 318
F + DACV PVL++ +A HP RG + G
Sbjct: 303 FADVDACVEPVLTIEEAAEHPQLKARGMIVERDRG 337
>gi|99082367|ref|YP_614521.1| L-carnitine dehydratase/bile acid-inducible protein F [Ruegeria sp.
TM1040]
gi|99038647|gb|ABF65259.1| L-carnitine dehydratase/bile acid-inducible protein F [Ruegeria sp.
TM1040]
Length = 373
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 193/359 (53%), Gaps = 15/359 (4%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFV----QDTVGYGKKSLCINL 58
L+GI ++E L PAPF M+L++ GA VI I + GA + + GKKS+ ++L
Sbjct: 2 LEGIRIIEIEALGPAPFAAMMLSDLGAEVICIHRKGAAATSIMPERSILDRGKKSIALDL 61
Query: 59 KKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLSGYGQDGPYS 118
K L + ++L +D ++E FR GVME+L LGP + +NPRL+Y RL+G+GQD P +
Sbjct: 62 KDPSDLKIAQDLIATADGLIEGFRPGVMERLGLGPQAMQSNNPRLVYGRLTGWGQDSPRA 121
Query: 119 SMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMALFERSKSGRG 178
+ AGHD+NY+ LSG L P PP L D GGG L G++ L +++G G
Sbjct: 122 NEAGHDLNYIALSGALWPASNAGNAPMPPATLVGDIGGGALYLVAGLLAGLLRAAQTGMG 181
Query: 179 QVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKDGRFMAVGALE 238
V+D + +GSA++ + L + + + RGENLLD G H+ TY + G ++AV LE
Sbjct: 182 TVVDAAIYDGSAHMMTLLMALRQAGSFGETRGENLLD-GPHWSRTYRCRCGGYIAVQCLE 240
Query: 239 SQFYAQLLAGLGMTEEELPQHEVETGR-----AKLTEKFKEKTQAEWCEIFDNTDACVTP 293
+FY L L + ++ Q + + ++L F + + W +F +DACVT
Sbjct: 241 PKFYEIFLERLNLAQDTDFQQQFDKASWPALTSRLARLFATQDREHWSALFATSDACVTK 300
Query: 294 VLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHNPAPGVHTREVL 352
VLS S+A P N + G++ APAPR G ++ + P H E+L
Sbjct: 301 VLSPSEAAKDPMNDRQTWH--TTGGILQAAPAPRFD---GQTRAPKKPPNRDEHRAEIL 354
>gi|304438984|ref|ZP_07398907.1| possible alpha-methylacyl-CoA racemase [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304372650|gb|EFM26233.1| possible alpha-methylacyl-CoA racemase [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 386
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 205/389 (52%), Gaps = 23/389 (5%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRID---KHG----AQPFVQDT------VG 48
AL+ + +L+F L P P+ M+L +FGA VI+I KH A+P V+ +
Sbjct: 3 ALENVKILDFTTLLPGPYATMVLADFGAEVIKISSKSKHDLVLEAEPKVEGISQNQLWLN 62
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K ++ +NLK + + ++K LA +DV++E FR GVM+ L L + + K NP +IY +
Sbjct: 63 RNKSTISLNLKSKEAVEIVKELAKDADVVVEQFRPGVMKSLGLSYEDIKKVNPEIIYCSI 122
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQDGP ++ AGHDIN+L SGIL+ G + P D G +GI++A
Sbjct: 123 TGYGQDGPMANRAGHDINFLAKSGILASSGRKEEGPVLYSTQLGDLASGASNAIIGILLA 182
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFL-WDKPRGENLLDGGAHFYDTYETK 227
L ++K+G+GQ ID +M++G L S P G + L+GG+ YD Y TK
Sbjct: 183 LNYKTKTGKGQYIDISMMDGLIPLNSLYGNGYLGGGALPTPEG-DFLNGGS-CYDFYRTK 240
Query: 228 DGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETGRAKLTEKFKEKTQAEWCEIFDNT 287
D RF++VG+LE +F+ + + + + + ++ + KEKT EW +IF+
Sbjct: 241 DDRFISVGSLEPKFWQIFTKAIDREDLKDKSAYDASIKEEIKSRIKEKTFKEWMDIFNGL 300
Query: 288 DACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAP---APAPRLSRTPGTSKITEH-NPA 343
DACV VL+L + PH RG I + A +L +TP I +H
Sbjct: 301 DACVEGVLNLKEVLEDPHTKGRGMVIEFKVKNTTNKQFANPIKLYKTPA---IYDHPGKE 357
Query: 344 PGVHTREVLRHFGYSDANIEELIREDVIE 372
G+ T ++L+ Y+D I+E+ DV +
Sbjct: 358 IGIDTEKILKSLNYTDEEIKEMEERDVFK 386
>gi|374702931|ref|ZP_09709801.1| L-carnitine dehydratase/bile acid-inducible protein F [Pseudomonas
sp. S9]
Length = 393
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 201/400 (50%), Gaps = 55/400 (13%)
Query: 3 LKGITVLEFAGLAPAPFCGMILNEFGATVIRIDKHGAQPFVQ------DTVGYG------ 50
L + VL+F+ L P PF ++L + GA V+R++ V+ D V
Sbjct: 5 LASLKVLDFSTLLPGPFASLLLADMGAQVLRVESPTRTDLVRVLPPHVDGVSASHAYLNR 64
Query: 51 -KKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARLS 109
K+S+ ++LK+A + V++ L D++LE FR GVM+KL +G L NPRLIY ++
Sbjct: 65 NKRSIALDLKQAAAVEVVRQLVQDYDIVLEQFRPGVMDKLGIGYQALKAINPRLIYVSIT 124
Query: 110 GYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMAL 169
GYGQ GPY AGHDINYL L+G+ S G P P AD GG L +G++ A+
Sbjct: 125 GYGQTGPYKDRAGHDINYLALAGVASYTGRSESGPLPLGVQLADLAGGSLHGVMGLLAAV 184
Query: 170 FERSKSGRGQVIDCNMVE---------GSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHF 220
+R+ +G GQ +D +M + G+ YL + + +P + G F
Sbjct: 185 IQRNVTGEGQHVDISMTDCAFSLNAMAGAGYLAAGV----------EPEMQKQALNGGSF 234
Query: 221 YDTYETKDGRFMAVGALESQFYAQLLAGLGMTE------EELPQHEVETGRAKLTEKFKE 274
YD Y T+DGR+++VG+LE QF Q A +G E P+ + R +L +F++
Sbjct: 235 YDYYRTRDGRWISVGSLEPQFMQQFCAAIGRPELAASGLSAKPEEQQALKR-ELEIEFEK 293
Query: 275 KTQAEWCEIFDNTDACVTPVLSLSQATSHPHNVHRG--SFIPNRAGVVAPAPAPRLSRTP 332
E C+ F DACV P+LS S+A HP RG + +P R G+ A R P
Sbjct: 294 HDFDELCQRFAQIDACVEPMLSFSEACEHPQAKARGLITEVP-RQGLA----AQRQLACP 348
Query: 333 GTSKITEHNPAP-------GVHTREVLRHFGYSDANIEEL 365
K + PAP G HT EVL GYS+ I EL
Sbjct: 349 --IKFSAGLPAPRHVGVEVGAHTAEVLAELGYSEQQITEL 386
>gi|169632486|ref|YP_001706222.1| hypothetical protein ABSDF0594 [Acinetobacter baumannii SDF]
gi|169151278|emb|CAO99973.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 372
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 177/333 (53%), Gaps = 25/333 (7%)
Query: 2 ALKGITVLEFAGLAPAPFCGMILNEFGATVIRIDK-------------HGAQPFVQDTVG 48
AL G+ VL+F+ L P PF M L + GA VI I+ Q +
Sbjct: 4 ALNGLKVLDFSTLLPGPFATMYLADMGAEVIHIESPSRPDLIRIMPPYANGQATAHSYLN 63
Query: 49 YGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYARL 108
K+S+ ++LK A + ++K ++ D+++E FR VM +L L L + NPRLIY +
Sbjct: 64 RNKQSIVLDLKDAASIDLIKAKISEFDIVIEQFRPDVMRRLGLDYATLAEINPRLIYCSI 123
Query: 109 SGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIVMA 168
+GYGQ G Y AGHDINYL L+GI G ++ P P AD GG L + I+ A
Sbjct: 124 TGYGQTGSYKDRAGHDINYLALAGIAGYSGRQDSGPPPLGIQVADIAGGSLHAVIAILAA 183
Query: 169 LFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYETKD 228
+ ERS+SG GQ ID +M + A L S ++ + +L+GG FYD Y T+D
Sbjct: 184 VVERSRSGIGQYIDISMTDCVASLNSMAASATLAAQVEQAPEQGMLNGGI-FYDYYMTQD 242
Query: 229 GRFMAVGALESQFYAQLLAGL--------GMTEEELPQHEVETGRAKLTEKFKEKTQAEW 280
GR++++G+LE QF A L A L G + +E + EV + + EK K KT EW
Sbjct: 243 GRYLSIGSLEPQFMAGLSAALDLPVLLQKGASLDEQDRQEV---KQAIQEKIKAKTFKEW 299
Query: 281 CEIFDNTDACVTPVLSLSQATSHPHNVHRGSFI 313
EIF N D CV PVLSLS+A + P RG +
Sbjct: 300 HEIFANLDVCVEPVLSLSEALNSPLAHQRGWIV 332
>gi|395774571|ref|ZP_10455086.1| L-carnitine dehydratase/bile acid-inducible protein F [Streptomyces
acidiscabies 84-104]
Length = 351
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 185/330 (56%), Gaps = 16/330 (4%)
Query: 47 VGYGKKSLCINLKKAKGLSVMKNLANQSDVILEPFRKGVMEKLQLGPDVLCKSNPRLIYA 106
V GK+ + ++L+ A+G +++ +L + +DV++E FR GVME+L LGP + PRL+YA
Sbjct: 25 VDRGKRLIAVDLRHAEGRALLLDLVSSADVLVEGFRPGVMERLGLGPQPCLERRPRLVYA 84
Query: 107 RLSGYGQDGPYSSMAGHDINYLGLSGILSLLGWRNRNPTPPCNLAADFGGGGLMCALGIV 166
RL+G+G+ GP+S GHD+ + LSG L+L G + P P N AD GGGGLM A+G++
Sbjct: 85 RLTGFGRAGPWSERPGHDLGFCALSGALALTGPADGAPLPAANAVADMGGGGLMLAMGVI 144
Query: 167 MALFERSKSGRGQVIDCNMVEGSAYLGSWLTRTQDTFLWDKPRGENLLDGGAHFYDTYET 226
AL E + G GQV+D +MV G+A L S + + + LW RG NLLDGGA +Y TY
Sbjct: 145 AALLEAERGGAGQVVDTSMVAGAASLLSIVLGLRASGLWSDRRGTNLLDGGAPYYATYRC 204
Query: 227 KDGRFMAVGALESQFYAQLLAGLGMTEEELPQHEVETG-----RAKLTEKFKEKTQAEWC 281
D R++AV ALE FY L+ LG+ L + + G R L F + + +W
Sbjct: 205 SDERYVAVAALEEPFYRALVEALGIDSRALAWRD-DPGQWPLLRRLLATAFARRPRDDWA 263
Query: 282 EIFDNTDACVTPVLSLSQATSHPHNVHRGSFIPNRAGVVAPAPAPRLSRTPGTSKITEHN 341
DACV PVL L +A S GS AG+ P P P RTP + I+
Sbjct: 264 AEL-PPDACVVPVLELGEAVS-------GSAYTVHAGIPQPVPGPHFGRTP--AGISRPA 313
Query: 342 PAPGVHTREVLRHFGYSDANIEELIREDVI 371
P G HT EVL +G +E L + VI
Sbjct: 314 PEAGQHTAEVLASYGVPQTRVETLAAQGVI 343
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,424,160,968
Number of Sequences: 23463169
Number of extensions: 289480575
Number of successful extensions: 703702
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8537
Number of HSP's successfully gapped in prelim test: 728
Number of HSP's that attempted gapping in prelim test: 675922
Number of HSP's gapped (non-prelim): 10543
length of query: 381
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 237
effective length of database: 8,980,499,031
effective search space: 2128378270347
effective search space used: 2128378270347
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)